BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003592
(808 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359479063|ref|XP_002285019.2| PREDICTED: auxin response factor 4-like [Vitis vinifera]
gi|297746231|emb|CBI16287.3| unnamed protein product [Vitis vinifera]
Length = 798
Score = 1228 bits (3178), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 626/810 (77%), Positives = 683/810 (84%), Gaps = 14/810 (1%)
Query: 1 MEFDLNHAATTEGEKIAFCNGDCGKNNSGCVCYLNSSSSSSSCSANSSSSSSLSSSIYFE 60
ME DLNHA T E EK AFCNGDC K + SSSSSS SA++SS+S SSSIY E
Sbjct: 1 MEIDLNHAVT-EVEKHAFCNGDCDKASC----VCCLSSSSSSSSASNSSASPDSSSIYLE 55
Query: 61 LWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQLL 120
LWH CAG LTSLPKKGNVVVYFPQGHLEQ ASSS FPP+++ FDL PQIFC+VV+VQLL
Sbjct: 56 LWHVCAGRLTSLPKKGNVVVYFPQGHLEQAASSSPFPPMDISTFDLPPQIFCRVVNVQLL 115
Query: 121 ANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASD 180
ANKENDEVYTQV LLPQPEL G+NLE K+LE LGVDEEGGG SPTKSTPHMFCKTLTASD
Sbjct: 116 ANKENDEVYTQVTLLPQPELAGINLEGKELEGLGVDEEGGGGSPTKSTPHMFCKTLTASD 175
Query: 181 TSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTG 240
TSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTG
Sbjct: 176 TSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTG 235
Query: 241 WSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVAN 300
WSIFVSQKNLVSGDAVLFLRG+ GELRLGIRR+V+PRNGLPDSI+ QNSYPNVLS+ AN
Sbjct: 236 WSIFVSQKNLVSGDAVLFLRGEGGELRLGIRRAVRPRNGLPDSIIGNQNSYPNVLSLAAN 295
Query: 301 AVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCNGVV 360
AV+TKSMFHVFYSPRA+HA+FVIPYQKYVK I NPI IGTRFKMR++MDDSPERR +GVV
Sbjct: 296 AVATKSMFHVFYSPRASHAEFVIPYQKYVKSITNPISIGTRFKMRYDMDDSPERRSSGVV 355
Query: 361 TGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKL 420
TGI DLDPYRWPNSKWRCLMVRWD+ I SD QE+VSPWEID SVSLPPLSIQSSPR+KKL
Sbjct: 356 TGIGDLDPYRWPNSKWRCLMVRWDDDIVSDPQERVSPWEIDPSVSLPPLSIQSSPRLKKL 415
Query: 421 RTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHPLGFEMR 480
RT LQA PP+ P++ GGG LDFEESVRSSKVLQGQENVGFVSPLYGCD VN L FEM+
Sbjct: 416 RTSLQATPPNNPING-GGGFLDFEESVRSSKVLQGQENVGFVSPLYGCDKVNRSLDFEMQ 474
Query: 481 APAHQSLALNGIRKDNINELVRALPTSYTGFVESNRFPKVLQGQEICPLRSLTGKVDLNL 540
P SLA GI K N E +RA PT+YTGF+ES+RFPKVLQGQEI PLRSL GK D NL
Sbjct: 475 NP---SLASTGIEKANFCEFMRAPPTTYTGFLESDRFPKVLQGQEIGPLRSLAGKSDFNL 531
Query: 541 GTWGKPNFGCNSMNMYQASKPNIYPPPSESLSNMFFPYGDMPKTVQHHTMPPYASNLQRE 600
G+WGKPN GCN NMYQ KPN YP SE + NM+FPY D+ K Q M YASN RE
Sbjct: 532 GSWGKPNLGCNLFNMYQKPKPNFYPLASEGIRNMYFPYNDIYKGGQDPVMLSYASNFPRE 591
Query: 601 NVKLNSSSIQMPAIGAEIRKANLLNEHKPVENIPT-PTFKANMRSHKDGSFNGTAAGCKL 659
NV N SSI+ IG E+RK N+ NE KP ENI P + N++ KD +F+GTAAGCKL
Sbjct: 592 NVPFNPSSIRSGVIGTEVRKLNIPNEPKPPENISAPPNLETNLKHQKDDTFSGTAAGCKL 651
Query: 660 FGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGL 719
FGFSLT ETP P+SQ+ GKRSCTKVHKQG+LVGRAIDL RLNGY DL SELE LF MEGL
Sbjct: 652 FGFSLTGETP-PNSQNSGKRSCTKVHKQGNLVGRAIDLSRLNGYGDLFSELERLFGMEGL 710
Query: 720 LRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIG-TTDDTQSC 778
LRDP KGW+ILYTDSEND+MVVGDDPWHEFCN VSKIHIYTQEEVEKMTIG +DDTQSC
Sbjct: 711 LRDPDKGWQILYTDSENDMMVVGDDPWHEFCNVVSKIHIYTQEEVEKMTIGIISDDTQSC 770
Query: 779 LDQAPVIMEVSVSKSSSVSQPDSSPTVVRV 808
L++APVI++ VSKSSSV QPDSSPTV+R+
Sbjct: 771 LEEAPVILD--VSKSSSVGQPDSSPTVIRI 798
>gi|255570833|ref|XP_002526369.1| Auxin response factor, putative [Ricinus communis]
gi|223534328|gb|EEF36040.1| Auxin response factor, putative [Ricinus communis]
Length = 810
Score = 1228 bits (3176), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 611/805 (75%), Positives = 675/805 (83%), Gaps = 18/805 (2%)
Query: 1 MEFDLNHAATTEGEKIAFCNGDCGKNNSGCVCYLNSSSSSSSCSANSSSSSSLSSSIYFE 60
ME DLNHA T + KNN+ Y N+ SSSS +++SS S ++SSIY E
Sbjct: 1 MEIDLNHAVT-----------EVEKNNNAF--YTNNGDSSSSSCSSNSSQSPVTSSIYLE 47
Query: 61 LWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQLL 120
LWHACAGPLTSLPKKGNVVVYFPQGHLEQVA SS F P+E+P FDLQPQIFCKVV+VQLL
Sbjct: 48 LWHACAGPLTSLPKKGNVVVYFPQGHLEQVAPSSPFSPMEMPTFDLQPQIFCKVVNVQLL 107
Query: 121 ANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASD 180
ANKENDEVYTQ+ALLPQPEL G NLE K+LE+LGVDEEGGG P KSTPHMFCKTLTASD
Sbjct: 108 ANKENDEVYTQLALLPQPELVGPNLEVKELEELGVDEEGGGGLPAKSTPHMFCKTLTASD 167
Query: 181 TSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTG 240
TSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTG
Sbjct: 168 TSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTG 227
Query: 241 WSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVAN 300
WSIFVSQKNLVSGDAVLFLRG+DGELRLGIRR+V+PRNGLPDS++ KQNSYP+VLSVVAN
Sbjct: 228 WSIFVSQKNLVSGDAVLFLRGEDGELRLGIRRAVRPRNGLPDSVIGKQNSYPSVLSVVAN 287
Query: 301 AVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCNGVV 360
A+STKSMF+V YSPRA+HADFV+PY+KY+K IMNP+CIGTRFKMRFEMDDSPERRC+GVV
Sbjct: 288 AISTKSMFNVLYSPRASHADFVVPYKKYMKSIMNPVCIGTRFKMRFEMDDSPERRCSGVV 347
Query: 361 TGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKL 420
TGI+DL+PYRWPNSKWRCLMVRWDE IG+DHQE+VSPWEID SVSLPPLSIQSSPR+KKL
Sbjct: 348 TGISDLNPYRWPNSKWRCLMVRWDEDIGNDHQERVSPWEIDPSVSLPPLSIQSSPRLKKL 407
Query: 421 RTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHPLGFEMR 480
RT LQA PPD P++ GGG LDFEES RSSKVLQGQENVGFVSPLYGCDT+N P FEMR
Sbjct: 408 RTSLQATPPDNPITG-GGGFLDFEESGRSSKVLQGQENVGFVSPLYGCDTMNRPPDFEMR 466
Query: 481 APAHQSLALNGIRKDNINELVRALPTSYTGFVESNRFPKVLQGQEICPLRSLTGKVDLNL 540
+P HQ+L G K NI E+ R PT+YTGF E++RFPKVLQGQEICPLRSLT K D NL
Sbjct: 467 SPVHQNLVSTGREKANIGEITRTRPTTYTGFAETDRFPKVLQGQEICPLRSLTSKGDFNL 526
Query: 541 GTWGKPNFGCNSMNMYQASKPNIYPPPSESLSNMFFPYGDMPKTVQHHTMPPYASNLQRE 600
G W K N GC S NMYQA + N YP ESL N++FPYGD+ KT Q M YA+N RE
Sbjct: 527 GAWVKRNVGCGSFNMYQAPRRNFYPLGPESLQNVYFPYGDVYKTGQDARMRSYATNFPRE 586
Query: 601 NVKLNSSSIQMPAIGAEIRKANLLNEHKPVE-NIPTPTFKANMRSHKDGSFNGTAAGCKL 659
N + + SIQ E+ K N L++ K E +P N+RS KD SF GT++GCKL
Sbjct: 587 NFQFGAPSIQAGVSRDEVGKPNQLSDLKTQEPGSASPALGVNLRSQKDNSFGGTSSGCKL 646
Query: 660 FGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGL 719
FGFSLT+E+P P+SQ+ GKRSCTKVHKQGSLVGRAIDL RLNGY+DLLSELE LF+MEGL
Sbjct: 647 FGFSLTAESPNPNSQNSGKRSCTKVHKQGSLVGRAIDLSRLNGYSDLLSELERLFSMEGL 706
Query: 720 LRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGTT-DDTQSC 778
L+DP KGWRILYTDSENDVMVVGDDPWHEFCN VSKIHIYTQEEVEKMTIG DDTQSC
Sbjct: 707 LQDPNKGWRILYTDSENDVMVVGDDPWHEFCNVVSKIHIYTQEEVEKMTIGVIGDDTQSC 766
Query: 779 LDQAPVIMEVSVSKSSSVSQPDSSP 803
LDQA V+ME SKSSSV QPDSSP
Sbjct: 767 LDQAHVVME--ASKSSSVGQPDSSP 789
>gi|356544621|ref|XP_003540747.1| PREDICTED: auxin response factor 4-like [Glycine max]
Length = 791
Score = 1118 bits (2892), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 560/810 (69%), Positives = 637/810 (78%), Gaps = 21/810 (2%)
Query: 1 MEFDLNHAATTEGEKIAFCNGDCGKNNSGCVCYLNSSSSSSSCSANSSSSSSLSSSIYFE 60
ME DLNH TE EK AFC+ +C K + + S S SSSS++ SS Y E
Sbjct: 1 MEIDLNHE-VTEAEKNAFCDRECEKGAGA-----GAGITCWSSSTCSSSSAACVSSSYLE 54
Query: 61 LWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQLL 120
LWHACAGPLTSL KKGNVVVYFPQGHLEQVAS S F P+E+P +DLQPQIFC+VV+VQLL
Sbjct: 55 LWHACAGPLTSLLKKGNVVVYFPQGHLEQVASFSPFTPLEIPTYDLQPQIFCRVVNVQLL 114
Query: 121 ANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASD 180
ANKENDEVYTQV LLPQPELEG+ E K+LE+LG +E+G RSPTKSTPHMFCKTLTASD
Sbjct: 115 ANKENDEVYTQVTLLPQPELEGMYSEGKELEELGAEEDGDERSPTKSTPHMFCKTLTASD 174
Query: 181 TSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTG 240
TSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEW+FRHIYRGQPRRHLLTTG
Sbjct: 175 TSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLLTTG 234
Query: 241 WSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVAN 300
WSIFVSQKNLVSGDAVLFLRG++GELRLGIRR+V+PRN LP+S++ QN Y NVLS VAN
Sbjct: 235 WSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAVRPRNDLPESVIGSQNCYSNVLSSVAN 294
Query: 301 AVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRC-NGV 359
A+STKS FHVFYSPRA+HADFV+PYQKYVK I NP+ IGTRFKMRFEMD+S ERRC +G
Sbjct: 295 AISTKSKFHVFYSPRASHADFVVPYQKYVKSIKNPVSIGTRFKMRFEMDESQERRCSSGT 354
Query: 360 VTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKK 419
+ +DLDPYRW SKWRCLMVRWDE I ++HQ++VSPWEID S LPPLSIQSSPR+KK
Sbjct: 355 LIATSDLDPYRWAKSKWRCLMVRWDEDIETNHQDRVSPWEIDPSAPLPPLSIQSSPRLKK 414
Query: 420 LRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHPLGFEM 479
LRTGLQ P + ++ARG G++ FEESVRS KVLQGQEN GFVS YGCDTV P GFEM
Sbjct: 415 LRTGLQVASPSHLITARGSGLVGFEESVRSPKVLQGQENAGFVSFYYGCDTVTKPPGFEM 474
Query: 480 RAPAHQSLALNGIRKDNINELVRALPTSYTGFVESNRFPKVLQGQEICPLRSLTGKVDLN 539
+P+H +L +RK + +EL P SY GFVE+NRFP+VLQGQEIC L+SLTGKVDLN
Sbjct: 475 SSPSHPNLGSAEVRKVSSSELNSVHPFSYAGFVETNRFPRVLQGQEICSLKSLTGKVDLN 534
Query: 540 LGTWGKPNFGCNSMNMYQASKPNIYPPPSESLSNMFFPYGDMPKTVQHHTMPPYASNLQR 599
LG WG PN C + N++QA+KPN P FPYGD+ + Q ++ QR
Sbjct: 535 LGAWGMPNLSCTTFNLHQATKPNFQPS--------LFPYGDIHQAGQASLFCSKSTTFQR 586
Query: 600 ENVKLNSSSIQMPAIGAEIRKANLLNEHKPVENIPTPTFKANMRSHKDGSFNGTAAGCKL 659
ENV N S Q I E+ +++L NEHK +NI + ANM D + G CKL
Sbjct: 587 ENVPFNKPSTQAGIIVNEVGRSDLPNEHKLQDNISS---AANMGVSNDNNVQGKVNACKL 643
Query: 660 FGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGL 719
FGFSL+ ET + Q+ KRSCTKVHKQGSLVGRAIDL RL+GYNDLLSELE LF+MEGL
Sbjct: 644 FGFSLSGETTAQNLQNSAKRSCTKVHKQGSLVGRAIDLSRLSGYNDLLSELERLFSMEGL 703
Query: 720 LRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIG-TTDDTQSC 778
L+DP KGWRILYTDSEND+MVVGDDPWHEFC+ VSKIHIYTQEEVEKMTIG +DDT SC
Sbjct: 704 LKDPDKGWRILYTDSENDIMVVGDDPWHEFCDVVSKIHIYTQEEVEKMTIGMISDDTHSC 763
Query: 779 LDQAPVIMEVSVSKSSSVSQPDSSPTVVRV 808
L++APVIME SKSSSV QPD SPT VRV
Sbjct: 764 LEEAPVIME--ASKSSSVGQPDYSPTAVRV 791
>gi|356543436|ref|XP_003540166.1| PREDICTED: auxin response factor 4-like [Glycine max]
Length = 793
Score = 1095 bits (2833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/813 (67%), Positives = 634/813 (77%), Gaps = 25/813 (3%)
Query: 1 MEFDLNHAATTEGEKIAFCNGDCGKNNSGCVCYLNSSSSSSSCSANSSSSSSLSSSIYFE 60
ME DLN A T+E EK A CNG+C K ++ SS ++S SSS+ SS Y E
Sbjct: 1 MEIDLNDAVTSEAEKSASCNGECEKG----------AALSSPTCSSSGSSSTRVSSSYIE 50
Query: 61 LWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQLL 120
LWHACAGPLTSLPKKGNVVVYFPQGHLEQ AS S F P+E+P +DLQPQIFC+VV++QLL
Sbjct: 51 LWHACAGPLTSLPKKGNVVVYFPQGHLEQAASFSPFSPMEMPTYDLQPQIFCRVVNIQLL 110
Query: 121 ANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASD 180
ANKENDEVYTQV LLPQ EL G+ +E K+LE LG DEEG +PTKSTPHMFCKTLTASD
Sbjct: 111 ANKENDEVYTQVTLLPQAELAGMYMEGKELEKLGADEEGNETTPTKSTPHMFCKTLTASD 170
Query: 181 TSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTG 240
TSTHGGFSVPRRAAEDCFPPLDYK+QRPSQELVAKDLHGVEW+FRHIYRGQPRRHLLTTG
Sbjct: 171 TSTHGGFSVPRRAAEDCFPPLDYKKQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLLTTG 230
Query: 241 WSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVAN 300
WSIFVSQKNLVSGDAVLFLRG++GELRLGIRR+ +PRNGLP+SI+ Q+ YPN LS VAN
Sbjct: 231 WSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAARPRNGLPESIVGSQSYYPNFLSSVAN 290
Query: 301 AVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRC-NGV 359
A+S KSMFHVFYSPRA+HADF +PYQKY+K I NP+ IGTRFKM+FEMD+SPERRC +G+
Sbjct: 291 AISAKSMFHVFYSPRASHADFAVPYQKYIKSIKNPVTIGTRFKMKFEMDESPERRCTSGI 350
Query: 360 VTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKK 419
VTG++DLDPY+WP SKWRCLMVRWDE I +HQ++VSPWE+D S SLPPLSIQSS R+KK
Sbjct: 351 VTGMSDLDPYKWPKSKWRCLMVRWDEDIEINHQDRVSPWEVDPSASLPPLSIQSSRRLKK 410
Query: 420 LRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHPLGFEM 479
LR GL A P++ + G +D EESVRSSKVLQGQEN GF+S YGCDTV FE+
Sbjct: 411 LRPGLLAAAPNHLTTVGSSGFMDSEESVRSSKVLQGQENTGFMSLYYGCDTVTKQPEFEI 470
Query: 480 RAPAHQSLALNGIRKDNINELVRALPTSYTGFVESNRFPKVLQGQEICPLRSLTGKVDLN 539
R+P+H +LA G+RK E +R P+SY GF E+N FP+VLQGQEICP RSL GKVDLN
Sbjct: 471 RSPSHPNLASTGVRKIAAAEFMRVHPSSYAGFTETNMFPRVLQGQEICPFRSLAGKVDLN 530
Query: 540 LGTWGKPNFGCNSMNMYQASKPNIYPPPSESLSNMFFPYGDMPKTVQHHTMP-PYASNLQ 598
G+WGKPN + N++QA+KPN + E + +FPYGD+ K Q +M +N Q
Sbjct: 531 FGSWGKPNVSYTNYNLHQATKPNFHSFGPEVVQTAYFPYGDIHKAGQGSSMLCSNPTNFQ 590
Query: 599 RENVKLNSSSIQMPAIGAEIRKANLLNEHKPVENIP-TPTFKANMRSHKDGSFNGTAAGC 657
RE++ N+ SIQ + NE K +NI + ANMR D +F G C
Sbjct: 591 REDIPFNTPSIQ--------SGITIPNEQKLQDNISGAASLGANMRIPNDDNFKGKVNAC 642
Query: 658 KLFGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNME 717
KLFGF L+ ET + Q+ KRSCTKVHKQGSLVGRAIDL RL+ YNDLL ELE LF+ME
Sbjct: 643 KLFGFPLSRETTAQNLQNSSKRSCTKVHKQGSLVGRAIDLSRLSSYNDLLIELERLFSME 702
Query: 718 GLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIG--TTDDT 775
GLL DP KGWRILYTDSEND+MVVGDDPWHEFC+ VSKIHI+TQEEVEKMTIG DD+
Sbjct: 703 GLLIDPNKGWRILYTDSENDIMVVGDDPWHEFCDVVSKIHIHTQEEVEKMTIGMMINDDS 762
Query: 776 QSCLDQAPVIMEVSVSKSSSVSQPDSSPTVVRV 808
QSCL+QAPV++E SKSSSV QPDSSPTVVR+
Sbjct: 763 QSCLEQAPVMVE--ASKSSSVGQPDSSPTVVRM 793
>gi|350537149|ref|NP_001233771.1| auxin response factor 4 [Solanum lycopersicum]
gi|85069287|gb|ABC69715.1| auxin response factor 4 [Solanum lycopersicum]
Length = 811
Score = 1094 bits (2829), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 557/814 (68%), Positives = 635/814 (78%), Gaps = 9/814 (1%)
Query: 1 MEFDLNHAATTEGEKIAFCNGDCGKNNSG-CV-CYLNSSSSSSSCSANSSSSSSLSSSIY 58
ME DLNHA +E EK CN +C K G CV C L +S++SS S SSSSS +SIY
Sbjct: 1 MEIDLNHALVSEVEKNVCCNEECDKGGGGGCVNCSLYTSTTSSCSSNVSSSSSLALTSIY 60
Query: 59 FELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPP--IEVPNFDLQPQIFCKVVD 116
ELWHACAGPLTSLPKKGNVVVYFPQGH+E+ S+ F P I++P F LQPQIFC+V D
Sbjct: 61 KELWHACAGPLTSLPKKGNVVVYFPQGHMEEAVSAFPFSPVKIDLPTFGLQPQIFCRVED 120
Query: 117 VQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTL 176
VQLLANKENDEVYTQ+ LLP PE ++LE K+ ED G DEEG G +P KS HMFCKTL
Sbjct: 121 VQLLANKENDEVYTQLTLLPLPESMAISLEGKEHEDSGTDEEGNGVNPGKSASHMFCKTL 180
Query: 177 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHL 236
TASDT+THGGFSVPRRAAEDCFPPLDYK+QRPSQEL+AKDLHGVEW+FRHIYRGQPRRHL
Sbjct: 181 TASDTTTHGGFSVPRRAAEDCFPPLDYKEQRPSQELIAKDLHGVEWKFRHIYRGQPRRHL 240
Query: 237 LTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLS 296
LTTGWSIFVSQKNLVSGDAVLFLRG+ G LRLGIRR+ +PRNGLP+SI+ Q S P+VLS
Sbjct: 241 LTTGWSIFVSQKNLVSGDAVLFLRGEGGNLRLGIRRAARPRNGLPESIIKSQYSGPDVLS 300
Query: 297 VVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRC 356
VA A+S KS FHVFYSPRA+HADFV+PYQKYVK I + I +GTRFKM+F++DDSPERR
Sbjct: 301 SVATALSAKSTFHVFYSPRASHADFVVPYQKYVKAINSRIPVGTRFKMKFDLDDSPERRY 360
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPR 416
+GVVTGI+D+DP+RWPNSKWRCLMVRWDE I S+HQE+VSPWEID SVSLPPLSIQSSPR
Sbjct: 361 SGVVTGISDMDPFRWPNSKWRCLMVRWDEDIMSNHQERVSPWEIDSSVSLPPLSIQSSPR 420
Query: 417 MKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHPLG 476
+KKLRT QAP A G +LDFEES+RSSKVLQGQEN+G +SP YGCD PL
Sbjct: 421 LKKLRTSQQAPSVLDSHFAGGSALLDFEESIRSSKVLQGQENLGLISPPYGCDKPVRPLD 480
Query: 477 FEMRAPAHQSLALNGIRKDNINELVRAL-PTSYTGFVESNRFPKVLQGQEICPLRSLTGK 535
FE++ A +L NG+ + + V+ PT+YTGF+ESNRFPKVLQGQEIC LRSLTGK
Sbjct: 481 FELQRVARHNLMPNGVENIIVGDFVKTQPPTTYTGFLESNRFPKVLQGQEICSLRSLTGK 540
Query: 536 VDLNLGTWGKPNFGCNSMNMYQASKPNIYPPPSESLSNMFFPYGDMPKTVQHHTMPPYAS 595
D+N G WGKP FGCN YQ + N YP SE N+F PY M + Q +P Y++
Sbjct: 541 GDVNFGAWGKPEFGCNVFGTYQRPRANFYPLASEGARNVFLPYNAMYRAGQDPVVPSYST 600
Query: 596 NLQRENVKLNSSSIQMPAIGAEIRKANLLNEHKPVENIPTPTFKANMRSHKDGSFNGTAA 655
N QREN LN +SIQ E+ +NE +P E + + ++ D SFN A
Sbjct: 601 NFQRENPTLNQNSIQNVVRREEVGMPKFVNEQRPPEMSKVSIPENHFKNENDDSFNAQAP 660
Query: 656 GCKLFGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFN 715
CKLFGFSLT E TPSSQS GKRSCTKVHKQGSLVGRAIDL RLNGY+DLL ELE LFN
Sbjct: 661 -CKLFGFSLTKEPSTPSSQSSGKRSCTKVHKQGSLVGRAIDLSRLNGYDDLLVELERLFN 719
Query: 716 MEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI-GTTDD 774
ME LLRDP KGWRILYTDSEND+MVVGDDPWHEFC VSKIHIYTQEEVEKMTI G +DD
Sbjct: 720 MEDLLRDPNKGWRILYTDSENDMMVVGDDPWHEFCEVVSKIHIYTQEEVEKMTIEGISDD 779
Query: 775 TQSCLDQAPVIMEVSVSKSSSVSQPDSSPTVVRV 808
TQSCL++AP IM+ VSKSSSV QPDSSPTV+R+
Sbjct: 780 TQSCLEEAPAIMD--VSKSSSVGQPDSSPTVIRI 811
>gi|356541288|ref|XP_003539110.1| PREDICTED: auxin response factor 4-like [Glycine max]
Length = 791
Score = 1089 bits (2816), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 561/810 (69%), Positives = 641/810 (79%), Gaps = 21/810 (2%)
Query: 1 MEFDLNHAATTEGEKIAFCNGDCGKNNSGCVCYLNSSSSSSSCSANSSSSSSLSSSIYFE 60
ME DLNH T E EK AFC+ +C K G C+ +S+ SSS+ SSSS+L SS Y E
Sbjct: 1 MEIDLNHEVT-EVEKNAFCDRECEKG-VGVTCWSSSTCSSST-----SSSSALVSSSYLE 53
Query: 61 LWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQLL 120
LWHACAGPLTSLPKKGNVVVYFPQGHLEQVAS S F P+E+P +DLQPQIFC+VV+VQLL
Sbjct: 54 LWHACAGPLTSLPKKGNVVVYFPQGHLEQVASFSPFTPLEIPTYDLQPQIFCRVVNVQLL 113
Query: 121 ANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASD 180
ANKENDEVYTQV LLPQ ELEG+ LE K+LE+LG +EEG RSPTKSTPHMFCKTLTASD
Sbjct: 114 ANKENDEVYTQVTLLPQAELEGMYLEGKELEELGAEEEGDDRSPTKSTPHMFCKTLTASD 173
Query: 181 TSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTG 240
TSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLH VEW+FRHIYRGQPRRHLLTTG
Sbjct: 174 TSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHDVEWKFRHIYRGQPRRHLLTTG 233
Query: 241 WSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVAN 300
WSIFVSQKNLVSGDAVLFLRG++GELRLGIRR+V+PRN LP+S++ QN YPNVLS VAN
Sbjct: 234 WSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAVRPRNDLPESVIGSQNCYPNVLSSVAN 293
Query: 301 AVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERR-CNGV 359
A+STKS FHVFYSPRA+ ADFV+PYQKYVK I NP+ IGTRFKMRFEMD+S ERR C+G+
Sbjct: 294 AISTKSKFHVFYSPRASQADFVVPYQKYVKSIKNPVSIGTRFKMRFEMDESQERRCCSGM 353
Query: 360 VTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKK 419
+ G +DLDPYRWP SKWRCLMVRWDE I ++H+++VSPWEID S LPPLSIQSSPR+KK
Sbjct: 354 LIGTSDLDPYRWPKSKWRCLMVRWDEDIETNHKDRVSPWEIDPSAPLPPLSIQSSPRLKK 413
Query: 420 LRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHPLGFEM 479
LRTGLQ P + ++ARG G++DFEESVRS KVLQGQEN GF S YGCDTV P GFEM
Sbjct: 414 LRTGLQVASPSHLITARGRGLIDFEESVRSPKVLQGQENAGFGSLYYGCDTVTKPPGFEM 473
Query: 480 RAPAHQSLALNGIRKDNINELVRALPTSYTGFVESNRFPKVLQGQEICPLRSLTGKVDLN 539
+ +H +L +RK +EL P SY GFVE+NRFP+VLQGQEICPL+SLTGKVD+N
Sbjct: 474 SSQSHPNLGSAEVRKITSSELSSVHPFSYAGFVETNRFPRVLQGQEICPLKSLTGKVDMN 533
Query: 540 LGTWGKPNFGCNSMNMYQASKPNIYPPPSESLSNMFFPYGDMPKTVQHHTMPPYASNLQR 599
LG WG PN C + N++QA+KP S FPYGD+ + Q ++ QR
Sbjct: 534 LGAWGMPNLSCTTFNLHQATKP--------SFQLSLFPYGDIHQASQASLFCSKSTTFQR 585
Query: 600 ENVKLNSSSIQMPAIGAEIRKANLLNEHKPVENIPTPTFKANMRSHKDGSFNGTAAGCKL 659
ENV N S Q I E+ +++L N+HK N + NM D + G CKL
Sbjct: 586 ENVPFNKPSTQAGIIVNEVGRSDLPNDHKLQGN--NISAAGNMGVSIDNNVQGKVNACKL 643
Query: 660 FGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGL 719
FGFSL+ ET T + Q+ KRSCTKVHKQGSLVGRAIDL RL+GYNDLLSELE LF+MEGL
Sbjct: 644 FGFSLSGETTTQNLQNSAKRSCTKVHKQGSLVGRAIDLSRLSGYNDLLSELERLFSMEGL 703
Query: 720 LRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIG-TTDDTQSC 778
L+DP KGW+ILYTDSEND+MVVGDDPWHEFC+ VSKIHIYTQEEVEKMTI +DDT SC
Sbjct: 704 LKDPDKGWKILYTDSENDIMVVGDDPWHEFCDVVSKIHIYTQEEVEKMTIEMISDDTHSC 763
Query: 779 LDQAPVIMEVSVSKSSSVSQPDSSPTVVRV 808
L++APVIME SKSSSV QPD SPT VRV
Sbjct: 764 LEEAPVIME--ASKSSSVGQPDYSPTAVRV 791
>gi|87241206|gb|ABD33064.1| Transcriptional factor B3; Auxin response factor;
Aux/IAA_ARF_dimerisation [Medicago truncatula]
Length = 810
Score = 1053 bits (2723), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 542/816 (66%), Positives = 631/816 (77%), Gaps = 14/816 (1%)
Query: 1 MEFDLNHAATTEGEKIAFCNGDCGKNNSGCVCYLNSSSSSSSCSANSSSSSSLSSSIYFE 60
ME DLN + TE +K NG C K+ CVC L+SSSS + ++SSS+S++ SS Y E
Sbjct: 1 MEIDLNDS-ITEVKKNVCSNGKCEKS-VCCVCTLSSSSSPTC--SSSSSTSAIVSSSYLE 56
Query: 61 LWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQLL 120
LWHACAGPLTSLPKKGNVVVYFPQGHLEQVAS S F +E+P + LQPQI C+VV+VQLL
Sbjct: 57 LWHACAGPLTSLPKKGNVVVYFPQGHLEQVASLSLFSSLEIPTYGLQPQILCRVVNVQLL 116
Query: 121 ANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASD 180
ANKENDEVYTQVALLPQ EL G+ L+ K+ E L D+EG GRSPTK HMFCKTLTASD
Sbjct: 117 ANKENDEVYTQVALLPQAELAGMCLDDKEPEGLEADDEGNGRSPTKLASHMFCKTLTASD 176
Query: 181 TSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTG 240
TSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGV W+FRHIYRGQPRRHLLTTG
Sbjct: 177 TSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVGWKFRHIYRGQPRRHLLTTG 236
Query: 241 WSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVAN 300
WSIFVSQKNLVSGDAVLFLRG++GELRLGIRR+ +PRNGLP+SI+ Q+ P+ LS VAN
Sbjct: 237 WSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAARPRNGLPESIIGNQSCSPSFLSSVAN 296
Query: 301 AVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRC-NGV 359
A+S KSMFHVFYSPRA+HADFV+PYQKY K I NP+ IGTRFKM+FEMD+SPERRC +G+
Sbjct: 297 AISAKSMFHVFYSPRASHADFVVPYQKYAKSIRNPVTIGTRFKMKFEMDESPERRCSSGI 356
Query: 360 VTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKK 419
VTG++DLDPY+WP SKWRCLMVRWDE IG++HQ++VSPWEID S SLPPL+IQSS R+KK
Sbjct: 357 VTGMSDLDPYKWPKSKWRCLMVRWDEDIGANHQDRVSPWEIDPSTSLPPLNIQSSRRLKK 416
Query: 420 LRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHPLGFEM 479
LRTGL P + ++A G +DF+ES+RSSKVLQGQE F+S YGCDTV F++
Sbjct: 417 LRTGLHVESPSHFITAGDSGFMDFDESIRSSKVLQGQEKTSFMSLYYGCDTVTKQKEFDI 476
Query: 480 RAPAHQSLALNGIRKDNINELVRALPTSYTGFVESNRFPKVLQGQEICPLRSLTGKVDLN 539
+ H +LA NG RK +E R P+SY F E NRFP+VLQ QEI PLRSLTGKVDLN
Sbjct: 477 NSLRHTNLASNGARKITSSEFTRIQPSSYADFTEMNRFPRVLQAQEIYPLRSLTGKVDLN 536
Query: 540 LGTWGKPNFGCNSMNMYQASKPNIYPPPSESLSNMFFPYGDMPKTVQHHTMP-PYASNLQ 598
L +WGK N N++ A+K N + SE L N FPYGD+ K Q +M +N Q
Sbjct: 537 LNSWGKTNVSYTKYNLHNATKLNFHSLGSEVLQNSSFPYGDIHKVGQGSSMLCSKPTNFQ 596
Query: 599 RENVKLNSSSIQMPAIGAEIRKAN--LLNEHKPVENIPTPT-FKANMRSHKDGSFNGTAA 655
NV N+ S Q+ A+ E+ ++ + NE K +I T AN+R D +F
Sbjct: 597 LGNVSFNTPSSQIGALRNEVGLSSFKIRNEQKLQNDISAATSLDANIRISNDENFKEMVN 656
Query: 656 GCKLFGFSLT--SETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHL 713
CKLFGFSL+ +ET + + Q+ KRSCTKVHKQGSLVGRAIDL RL+ YNDL+SELE L
Sbjct: 657 PCKLFGFSLSAAAETTSQNLQNSAKRSCTKVHKQGSLVGRAIDLSRLSSYNDLVSELERL 716
Query: 714 FNMEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIG-TT 772
F MEGLLRDP KGWRILYTDSEND+MVVGDDPWHEFC+ VSKIHIYTQEEVEKMTIG
Sbjct: 717 FGMEGLLRDPDKGWRILYTDSENDIMVVGDDPWHEFCDMVSKIHIYTQEEVEKMTIGMMN 776
Query: 773 DDTQSCLDQAPVIMEVSVSKSSSVSQPDSSPTVVRV 808
DD QSCL+Q P+IME SKSSSV QPDSS TVVR+
Sbjct: 777 DDNQSCLEQTPLIME--ASKSSSVGQPDSSTTVVRI 810
>gi|357453821|ref|XP_003597191.1| Auxin response factor [Medicago truncatula]
gi|355486239|gb|AES67442.1| Auxin response factor [Medicago truncatula]
Length = 822
Score = 1044 bits (2700), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 542/828 (65%), Positives = 631/828 (76%), Gaps = 26/828 (3%)
Query: 1 MEFDLNHAATTEGEKIAFCNGDCGKNNSGCVCYLNSSSSSSSCSANSSSSSSLSSSIYFE 60
ME DLN + TE +K NG C K+ CVC L+SSSS + ++SSS+S++ SS Y E
Sbjct: 1 MEIDLNDS-ITEVKKNVCSNGKCEKS-VCCVCTLSSSSSPTC--SSSSSTSAIVSSSYLE 56
Query: 61 LWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQLL 120
LWHACAGPLTSLPKKGNVVVYFPQGHLEQVAS S F +E+P + LQPQI C+VV+VQLL
Sbjct: 57 LWHACAGPLTSLPKKGNVVVYFPQGHLEQVASLSLFSSLEIPTYGLQPQILCRVVNVQLL 116
Query: 121 ANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASD 180
ANKENDEVYTQVALLPQ EL G+ L+ K+ E L D+EG GRSPTK HMFCKTLTASD
Sbjct: 117 ANKENDEVYTQVALLPQAELAGMCLDDKEPEGLEADDEGNGRSPTKLASHMFCKTLTASD 176
Query: 181 TSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRG---------- 230
TSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGV W+FRHIYRG
Sbjct: 177 TSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVGWKFRHIYRGRDETELLCWL 236
Query: 231 --QPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQ 288
QPRRHLLTTGWSIFVSQKNLVSGDAVLFLRG++GELRLGIRR+ +PRNGLP+SI+ Q
Sbjct: 237 DCQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGENGELRLGIRRAARPRNGLPESIIGNQ 296
Query: 289 NSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEM 348
+ P+ LS VANA+S KSMFHVFYSPRA+HADFV+PYQKY K I NP+ IGTRFKM+FEM
Sbjct: 297 SCSPSFLSSVANAISAKSMFHVFYSPRASHADFVVPYQKYAKSIRNPVTIGTRFKMKFEM 356
Query: 349 DDSPERRC-NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
D+SPERRC +G+VTG++DLDPY+WP SKWRCLMVRWDE IG++HQ++VSPWEID S SLP
Sbjct: 357 DESPERRCSSGIVTGMSDLDPYKWPKSKWRCLMVRWDEDIGANHQDRVSPWEIDPSTSLP 416
Query: 408 PLSIQSSPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYG 467
PL+IQSS R+KKLRTGL P + ++A G +DF+ES+RSSKVLQGQE F+S YG
Sbjct: 417 PLNIQSSRRLKKLRTGLHVESPSHFITAGDSGFMDFDESIRSSKVLQGQEKTSFMSLYYG 476
Query: 468 CDTVNHPLGFEMRAPAHQSLALNGIRKDNINELVRALPTSYTGFVESNRFPKVLQGQEIC 527
CDTV F++ + H +LA NG RK +E R P+SY F E NRFP+VLQ QEI
Sbjct: 477 CDTVTKQKEFDINSLRHTNLASNGARKITSSEFTRIQPSSYADFTEMNRFPRVLQAQEIY 536
Query: 528 PLRSLTGKVDLNLGTWGKPNFGCNSMNMYQASKPNIYPPPSESLSNMFFPYGDMPKTVQH 587
PLRSLTGKVDLNL +WGK N N++ A+K N + SE L N FPYGD+ K Q
Sbjct: 537 PLRSLTGKVDLNLNSWGKTNVSYTKYNLHNATKLNFHSLGSEVLQNSSFPYGDIHKVGQG 596
Query: 588 HTMP-PYASNLQRENVKLNSSSIQMPAIGAEIRKAN--LLNEHKPVENIPTPT-FKANMR 643
+M +N Q NV N+ S Q+ A+ E+ ++ + NE K +I T AN+R
Sbjct: 597 SSMLCSKPTNFQLGNVSFNTPSSQIGALRNEVGLSSFKIRNEQKLQNDISAATSLDANIR 656
Query: 644 SHKDGSFNGTAAGCKLFGFSLT--SETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLN 701
D +F CKLFGFSL+ +ET + + Q+ KRSCTKVHKQGSLVGRAIDL RL+
Sbjct: 657 ISNDENFKEMVNPCKLFGFSLSAAAETTSQNLQNSAKRSCTKVHKQGSLVGRAIDLSRLS 716
Query: 702 GYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQ 761
YNDL+SELE LF MEGLLRDP KGWRILYTDSEND+MVVGDDPWHEFC+ VSKIHIYTQ
Sbjct: 717 SYNDLVSELERLFGMEGLLRDPDKGWRILYTDSENDIMVVGDDPWHEFCDMVSKIHIYTQ 776
Query: 762 EEVEKMTIG-TTDDTQSCLDQAPVIMEVSVSKSSSVSQPDSSPTVVRV 808
EEVEKMTIG DD QSCL+Q P+IME SKSSSV QPDSS TVVR+
Sbjct: 777 EEVEKMTIGMMNDDNQSCLEQTPLIME--ASKSSSVGQPDSSTTVVRI 822
>gi|449524944|ref|XP_004169481.1| PREDICTED: auxin response factor 4-like isoform 1 [Cucumis sativus]
Length = 802
Score = 1023 bits (2645), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 532/814 (65%), Positives = 619/814 (76%), Gaps = 20/814 (2%)
Query: 1 MEFDLNHAATTEGEKIAFCNGDCGKNNSGCVCYLNSSSSSSSCSANSSSSSSLSSSIYFE 60
ME DLN A+ G K A+C G+C + SSS+S +++SSS+ +SSS Y E
Sbjct: 1 MEIDLNQTASEVG-KNAYCYGNCEEG-----LCNCCLSSSTSSCSSNSSSTPVSSSTYLE 54
Query: 61 LWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQLL 120
LWHACAGPLTSLPKKGNVVVYFPQGHLEQ+AS+S F P+E+ FDLQP I C+V++V LL
Sbjct: 55 LWHACAGPLTSLPKKGNVVVYFPQGHLEQIASASPFSPMEMRTFDLQPHILCRVINVHLL 114
Query: 121 ANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRS---PTKSTPHMFCKTLT 177
ANKENDEVYTQ+ L P PEL G + K+LE+L ++ G S PT+STPHMFCKTLT
Sbjct: 115 ANKENDEVYTQLTLRPLPELLGTGVAGKELEELALNGADGDGSGGSPTRSTPHMFCKTLT 174
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAEDCFPPLDY Q RPSQEL+AKDLHGVEWRFRHIYRGQPRRHLL
Sbjct: 175 ASDTSTHGGFSVPRRAAEDCFPPLDYTQLRPSQELIAKDLHGVEWRFRHIYRGQPRRHLL 234
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWSIFVSQKNL+SGDAVLFLRG++GELRLGIRR+V+PRNGLPDSI+ QNS N L+
Sbjct: 235 TTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLAR 294
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCN 357
V A+STKS F VFY+PRA HA F+I QKYVK I NP+ +GTRFKMRFEMDDSPERR N
Sbjct: 295 VVKAISTKSTFDVFYNPRAYHAQFIISCQKYVKSINNPVSVGTRFKMRFEMDDSPERRFN 354
Query: 358 GVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRM 417
GVV GI+D+D +RWPNSKWRCL VRWD+ SDHQE+VSPWEID SVSLPPLS+QSSPR+
Sbjct: 355 GVVVGISDMDSFRWPNSKWRCLTVRWDK--DSDHQERVSPWEIDPSVSLPPLSVQSSPRL 412
Query: 418 KKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHPLGF 477
KKLRT LQA PP+ + R GG +DFE+SVRSSKVLQGQENVG VSP YGCDTV L F
Sbjct: 413 KKLRTSLQAAPPNNAFTGR-GGFMDFEDSVRSSKVLQGQENVGIVSPFYGCDTVKRSLEF 471
Query: 478 EMRAPAHQSLALNGIRKDNINELVRA-LPTSYTGFVESNRFPKVLQGQEICPLRSLTGKV 536
++R+ A Q+ G+ K NI + V+ +S+TGF+ES+RF KVLQGQEIC LR T K
Sbjct: 472 DVRSSAQQNQVSGGVEKLNIADYVKVHANSSFTGFMESDRFLKVLQGQEICSLRPPTSKP 531
Query: 537 DLNLGTWGKPNFGCNSMNMYQASKPNIYPPPSESLSNMFFPYGDMPKTVQHHTMPPYASN 596
+ +LG WGK N NS N +Q+ N Y S S M+FP +M T Q M SN
Sbjct: 532 EYSLGVWGKFNLSDNSFNTFQSPNSNFYHMASNSAQKMYFPRSEMHSTGQAAMMLSNDSN 591
Query: 597 LQRENVKLNSSSIQMPAIGAEIRKA--NLLNEHKPVENIPTPTFKANMRSHKDGSFNGTA 654
RE+ N S++ I ++ + +L E + + P PT +NMR+ KD N A
Sbjct: 592 FPRESALFNPSAVGANVIRTKMERTSRSLDRESLHLASAP-PTLGSNMRNSKDEHVNDNA 650
Query: 655 AGCKLFGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLF 714
GCKLFGFSLT+ET T + QS GKRSCTKVHKQGSLVGRAIDL RLNGY DL+SELE LF
Sbjct: 651 TGCKLFGFSLTTETAT-NVQSSGKRSCTKVHKQGSLVGRAIDLSRLNGYTDLISELERLF 709
Query: 715 NMEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGT-TD 773
+MEGLL+DP KGWR+LYTD+ENDVMVVGD PWH+FC+ VSKIHIYTQEEVEKMT G +D
Sbjct: 710 SMEGLLKDPDKGWRVLYTDNENDVMVVGDYPWHDFCDAVSKIHIYTQEEVEKMTNGVISD 769
Query: 774 DTQSCLDQAPVIMEVSVSKSSSVSQPDSSPTVVR 807
DTQSCLDQAP+ ME SKSSSV QPDS PT VR
Sbjct: 770 DTQSCLDQAPLCME--ASKSSSVGQPDSPPTAVR 801
>gi|259027688|gb|ACV91105.1| putative ARF4 protein [Petunia x hybrida]
Length = 808
Score = 1014 bits (2622), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/815 (64%), Positives = 614/815 (75%), Gaps = 14/815 (1%)
Query: 1 MEFDLNHAATTEGEKIAFCN-GDCGKNNSGCVCYLNSSSSSSSCSANSSSSSSLSSS-IY 58
ME DLNH +E EK A CN G+C K CV S+S+SS S SSSS+SL++S IY
Sbjct: 1 MEIDLNHE-VSEVEKNACCNNGECDKGGGSCVNCTLSTSTSSCSSNASSSSTSLATSSIY 59
Query: 59 FELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPI--EVPNFDLQPQIFCKVVD 116
ELW+ACAGPLT LPKKGNVVVYFPQGH+E+ ASSS F P+ ++P F L PQIFC+V D
Sbjct: 60 MELWYACAGPLTCLPKKGNVVVYFPQGHMEEAASSSPFSPMKMDLPTFGLHPQIFCRVDD 119
Query: 117 VQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTL 176
VQLLANKENDEVYTQ++LLP PE ++LE K+ ED G+DEE G +P KS HMFCKTL
Sbjct: 120 VQLLANKENDEVYTQLSLLPLPESVAISLEGKEHEDFGIDEERNGVNPGKSASHMFCKTL 179
Query: 177 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHL 236
TASDTSTHGGFSVPRRAAEDCFPPLDYK+QRPSQEL+AKDLHGVEW+FRHIYRGQPRRHL
Sbjct: 180 TASDTSTHGGFSVPRRAAEDCFPPLDYKEQRPSQELIAKDLHGVEWKFRHIYRGQPRRHL 239
Query: 237 LTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLS 296
LTTGWSIFVSQKNLVSGDAVLFLRG+ G+LRLGIRR+ +PRN LP+SI+ Q S +VLS
Sbjct: 240 LTTGWSIFVSQKNLVSGDAVLFLRGEGGDLRLGIRRAARPRNALPESIIKSQYSGSDVLS 299
Query: 297 VVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRC 356
VA+AVSTKS F+VFYSPRA+HADFV+PYQKYVK I I +GTRFKMRF++DDSPERR
Sbjct: 300 AVASAVSTKSAFNVFYSPRASHADFVVPYQKYVKSIKTRIPVGTRFKMRFDLDDSPERRY 359
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPR 416
+GVVTGI+D+DP+RWPNSKWRCLMVRWDE I ++HQE+VSPWEID SVSLPPLSIQSSPR
Sbjct: 360 SGVVTGISDMDPFRWPNSKWRCLMVRWDEDIMNNHQERVSPWEIDSSVSLPPLSIQSSPR 419
Query: 417 MKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHPLG 476
+KKLRT QA P D A G +LDFEE++RSSKV QGQEN G +SP YGCD PL
Sbjct: 420 LKKLRTSQQAQPVDSHF-AGGSALLDFEETIRSSKVSQGQENFGLISPPYGCDKTVRPLD 478
Query: 477 FEMRAPAHQSLALNGIRKDNINELVRAL-PTSYTGFVESNRFPKVLQGQEICPLRSLTGK 535
E+++ A +L NGI + + V+ PT+YTGF+ESNRFPKVLQGQEIC LRSLTGK
Sbjct: 479 CELQSVARHNLMPNGIENIVVGDFVKTQPPTTYTGFLESNRFPKVLQGQEICSLRSLTGK 538
Query: 536 VDLNLGTWGKPNFGCNSMNMYQASKPNIYPPPSESLSNMFFPYGDMPKTVQHHTMPPYAS 595
D+N G WGKP FGCN + YQ K N YP SE + NMF PY M + Q + Y +
Sbjct: 539 GDVNFGAWGKPEFGCNIFSTYQKPKTNFYPLASEGVRNMFLPYNAMYRAGQEPVLHSYNT 598
Query: 596 NLQRENVKLNSSSIQMPAIGAEIRKANLLNEHKPVENIPTPTFKANMRSHKDGSFNGTAA 655
N QREN +N + Q E NE + ++ T + + ++ S N A+
Sbjct: 599 NFQRENPTVNQTLTQNGVRREESGMQKFGNEQRALDLSKLSTPETHFKNENGDSLNAQAS 658
Query: 656 -GCKLFGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLF 714
F L E P+SQS GKRSCTKVHKQ L+GR DL LNG+ DLL ELE L
Sbjct: 659 VNSSAF---LDKEPSAPNSQSSGKRSCTKVHKQRGLIGRPFDLSGLNGHADLLVELERLL 715
Query: 715 NMEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI-GTTD 773
N+E LL DP KGWRILYTDS+ND+MVVG DPWHEFC VSKIHIYTQEEVEKMTI G +D
Sbjct: 716 NIEDLLSDPKKGWRILYTDSDNDLMVVGGDPWHEFCEVVSKIHIYTQEEVEKMTIEGISD 775
Query: 774 DTQSCLDQAPVIMEVSVSKSSSVSQPDSSPTVVRV 808
DTQSCL++AP +M+ SKSSSV QPDSSPTV+R+
Sbjct: 776 DTQSCLEEAPAVMD--ASKSSSVGQPDSSPTVIRI 808
>gi|225030808|gb|ACN79517.1| auxin response factor 4 [Lotus japonicus]
Length = 771
Score = 998 bits (2581), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/828 (62%), Positives = 612/828 (73%), Gaps = 77/828 (9%)
Query: 1 MEFDLNHAATTEGEKIAFCNGDCGKNNSGCVCYLNSSSSSSSCSANSSSSSSLSSSIYFE 60
ME DLN A T E +K A+CNGDC +N + CVC S SSS++ SS Y E
Sbjct: 1 MEIDLNDAVT-EVDKNAYCNGDC-ENCASCVC--------------SGSSSAIVSSSYLE 44
Query: 61 LWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQLL 120
LWHACAGPLTSLPKKGNVVVYFPQGHLEQ AS S F P++VP +DL PQIFCKV +VQLL
Sbjct: 45 LWHACAGPLTSLPKKGNVVVYFPQGHLEQAASFSPFSPLDVPTYDLHPQIFCKVANVQLL 104
Query: 121 ANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASD 180
ANKENDEVYTQV LLPQ ELEG+ LE K+LE +G D EG G++P KSTPHMFCKTLTASD
Sbjct: 105 ANKENDEVYTQVTLLPQAELEGIYLEGKELEGVGEDVEGNGKTPAKSTPHMFCKTLTASD 164
Query: 181 TSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTG 240
TSTHGGFSVPRRAAEDCFPPL QRPSQELVAKDLHGVEW+FRHIYRGQPRRHLLTTG
Sbjct: 165 TSTHGGFSVPRRAAEDCFPPL----QRPSQELVAKDLHGVEWKFRHIYRGQPRRHLLTTG 220
Query: 241 WSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVAN 300
WSIFVSQK LVSGDAVLFLRG++GELRLGIRR+ +PRNGLP+SI+ Q+ YPN LS VAN
Sbjct: 221 WSIFVSQKKLVSGDAVLFLRGENGELRLGIRRAARPRNGLPESIVGNQSCYPNFLSSVAN 280
Query: 301 AVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERR----- 355
A+S +SMFHVFYSPRA+HADFV+PY KYV+ I NP+ +GTRFKM+F+MD+SPERR
Sbjct: 281 AISARSMFHVFYSPRASHADFVVPYHKYVRSIKNPVTVGTRFKMKFDMDESPERRSTTAV 340
Query: 356 -----CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLS 410
+G+VTG++DLDPY+WP SKWRCLMVRWDE + ++HQ++VSPWE+D S SL PLS
Sbjct: 341 TINRCSSGIVTGMSDLDPYKWPKSKWRCLMVRWDEIVETNHQDRVSPWEVDPSASLSPLS 400
Query: 411 IQSSPRMKKLRTGLQAPPPDYPV--SARGG-GVLDFEESVRSSKVLQGQENVGFVSPLYG 467
IQ+S R+KK RT L+A P++ + SA GG G + FEESVRS KVLQGQEN F+S YG
Sbjct: 401 IQASRRLKKPRTDLEADSPNHLITGSATGGSGFMGFEESVRSPKVLQGQENTSFMSLYYG 460
Query: 468 CDTVNHPLGFEMRAPAHQSLALNGIRK-DNINELVRALPTSYTGFVESNRFPKVLQGQEI 526
CDTV F++++P+ +LA G+RK E++R P +Y GF E+NR P+VLQGQEI
Sbjct: 461 CDTVTKKPEFDIKSPSQPNLASTGVRKITAAAEVMRVHPFNYAGFTETNRLPRVLQGQEI 520
Query: 527 CPLRSLTGKVDLNLGTWGKPNFGCNSMNMYQASKPNIYPPPSESLSNMFFPYGDMPKTVQ 586
PL SLT E L +FP+GD+ K Q
Sbjct: 521 FPLSSLT-----------------------------------ELLQTAYFPFGDIHKAGQ 545
Query: 587 HHTMP-PYASNLQRENVKLNSSSIQMPAIGAEIRKANLL--NEHKPVENI--PTPTFKAN 641
+M +N QRENV N+ S Q + +E+ ++L NE K +NI + AN
Sbjct: 546 GFSMLCSKPTNFQRENVAFNAPSTQSGIMRSEVGLSDLTIPNEQKLQDNISGTAASLGAN 605
Query: 642 MRSHKDGSFNGTAAGCKLFGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLN 701
+R D +F+G CKLFGF L+ E+ + + Q+ KRSCTKVHKQGSLVGRAIDL RL+
Sbjct: 606 IRILNDDNFDGKVNACKLFGFPLSGESTSQNLQNTAKRSCTKVHKQGSLVGRAIDLSRLS 665
Query: 702 GYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQ 761
YNDLLSELE LF+MEGLLR+P KGWR+LYTD END+MVVGDDPWHEFCN VSKIHIYTQ
Sbjct: 666 SYNDLLSELERLFSMEGLLREPDKGWRVLYTDRENDIMVVGDDPWHEFCNVVSKIHIYTQ 725
Query: 762 EEVEKMTIG-TTDDTQSCLDQAPVIMEVSVSKSSSVSQPDSSPTVVRV 808
EEVEKMTIG +DDTQS L+QAP+IME SKSSSV QPDSSPTVVR+
Sbjct: 726 EEVEKMTIGMMSDDTQSSLEQAPLIME--TSKSSSVCQPDSSPTVVRI 771
>gi|147769056|emb|CAN70219.1| hypothetical protein VITISV_000577 [Vitis vinifera]
Length = 744
Score = 978 bits (2529), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 539/817 (65%), Positives = 604/817 (73%), Gaps = 82/817 (10%)
Query: 1 MEFDLNHAATTEGEKIAFCNGDCGKNNSGCVCYLNSSSSSSSCSANSSSSSSLSSSIYFE 60
ME DLNHA T E EK AFCNGBC K + SSSSSS SA++SS+S SSSIY E
Sbjct: 1 MEIDLNHAVT-EVEKHAFCNGBCDKASC----VCCLSSSSSSSSASNSSASPDSSSIYLE 55
Query: 61 LWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQLL 120
LWH CAG LTSLPKKGNVVVYFPQGHLEQ ASSS FPP+++ FDL PQIFC+VV+VQLL
Sbjct: 56 LWHVCAGRLTSLPKKGNVVVYFPQGHLEQAASSSPFPPMDISTFDLPPQIFCRVVNVQLL 115
Query: 121 ANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASD 180
ANKENDEVYTQV LLPQPEL G+NLE K+LE LGVDEEGGG SPTKSTPHMFCKTLTASD
Sbjct: 116 ANKENDEVYTQVTLLPQPELAGINLEGKELEGLGVDEEGGGGSPTKSTPHMFCKTLTASD 175
Query: 181 TSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTG 240
TSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTG
Sbjct: 176 TSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTG 235
Query: 241 WSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVAN 300
WSIFVSQKNLVSGDAVLFLRG+ GELRLGIRR+V+PRNGLPDSI+ QNSYPNVLS+ AN
Sbjct: 236 WSIFVSQKNLVSGDAVLFLRGEGGELRLGIRRAVRPRNGLPDSIIGNQNSYPNVLSLAAN 295
Query: 301 AVSTKSMFH---VFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRC- 356
AV+TKSMFH VF + TH + + + K + KM E+ +
Sbjct: 296 AVATKSMFHGLKVFN--KQTHLNMLQDGNQVNKFFL---------KMLPEIHNLQNVEVF 344
Query: 357 --NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSS 414
+GVVTGI DLDPYRWPNSKWRCLMVRWD+ I SD QE+VSPWEID SVSLPPLSIQSS
Sbjct: 345 LSSGVVTGIGDLDPYRWPNSKWRCLMVRWDDDIVSDPQERVSPWEIDPSVSLPPLSIQSS 404
Query: 415 PRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHP 474
PR+KKLRT LQA PP+ P++ GGG LDFEESVRSSKVLQGQENVGFVSPLYGCD VN
Sbjct: 405 PRLKKLRTSLQATPPNNPING-GGGFLDFEESVRSSKVLQGQENVGFVSPLYGCDKVNRS 463
Query: 475 LGFEMRAPAHQSLALNGIRKDNINELVRALPTSYTGFVESNRFPKVLQGQEICPLRSLTG 534
L FEM+ P SLA GI K N E +RA P +YTGF+ES+RFPKVLQGQEI PLRSL G
Sbjct: 464 LDFEMQNP---SLASTGIEKANFCEFMRAPPXTYTGFLESDRFPKVLQGQEIGPLRSLAG 520
Query: 535 KVDLNLGTWGKPNFGCNSMNMYQASKPNIYPPPSESLSNMFFPYGDMPKTVQHHTMPPYA 594
K D NLG+WGKPN GCN NMYQ KPN YP SE + NM+FPY D+ K Q M YA
Sbjct: 521 KSDFNLGSWGKPNLGCNLFNMYQKPKPNFYPLASEGIRNMYFPYNDIYKGGQDPVMLSYA 580
Query: 595 SNLQRENVKLNSSSIQMPAIGAEIRKANLLNEHKPVENIPT-PTFKANMRSHKDGSFNGT 653
SN RENV N SSI+ IG E+RK N+ NE KP ENI P + N++ KD +F+GT
Sbjct: 581 SNFPRENVPFNPSSIRSGVIGTEVRKXNIPNEPKPPENISAPPNLETNLKHQKDDTFSGT 640
Query: 654 AAGCKLFGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSE-LEH 712
AAGCKLFGFSLT ETP P+SQ+ G ++ +L+G + L+S+ LE
Sbjct: 641 AAGCKLFGFSLTGETP-PNSQNSGSQA-----------------RQLSGTSHLISQXLEW 682
Query: 713 LFNMEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIG-T 771
L EFCN VSKIHIYTQEEVEKMTIG
Sbjct: 683 LC---------------------------------EFCNVVSKIHIYTQEEVEKMTIGII 709
Query: 772 TDDTQSCLDQAPVIMEVSVSKSSSVSQPDSSPTVVRV 808
+DDTQSCL++APVI++ VSKSSSV QPDSSPTV+R+
Sbjct: 710 SDDTQSCLEEAPVILD--VSKSSSVGQPDSSPTVIRI 744
>gi|297796993|ref|XP_002866381.1| hypothetical protein ARALYDRAFT_496192 [Arabidopsis lyrata subsp.
lyrata]
gi|297312216|gb|EFH42640.1| hypothetical protein ARALYDRAFT_496192 [Arabidopsis lyrata subsp.
lyrata]
Length = 791
Score = 909 bits (2349), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/760 (64%), Positives = 559/760 (73%), Gaps = 33/760 (4%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVD 116
IY ELWHACAGPLT LPKKGNVVVYFPQGHLEQ A S P+E+P FDL PQIFC+VV
Sbjct: 57 IYSELWHACAGPLTCLPKKGNVVVYFPQGHLEQDAMVSYSSPLEIPKFDLNPQIFCRVVH 116
Query: 117 VQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTL 176
VQLLANKE DEVYTQV LLP E LN E K++++LG DEE S K TPHMFCKTL
Sbjct: 117 VQLLANKETDEVYTQVTLLPLQEFSMLNTEGKEVKELGGDEERNVSSSVKRTPHMFCKTL 176
Query: 177 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHL 236
TASDTSTHGGFSVPRRAAEDCF PLDYKQQRPSQEL+AKDLHGVEW+FRHIYRGQPRRHL
Sbjct: 177 TASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHL 236
Query: 237 LTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLS 296
LTTGWSIFVSQKNL SGDAVLFLR + GELRLGIRR+ +PRNGLPDSI+ K NS N+LS
Sbjct: 237 LTTGWSIFVSQKNLASGDAVLFLRDEGGELRLGIRRAARPRNGLPDSIIEK-NSCSNILS 295
Query: 297 VVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRC 356
++ANAVSTKSMFHVFYSPRATHA+FVIPY+KY+ I NPICIGTRF+MRFEMDDSPERRC
Sbjct: 296 LLANAVSTKSMFHVFYSPRATHAEFVIPYEKYITSIRNPICIGTRFRMRFEMDDSPERRC 355
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPR 416
GVVTG+ DLDPYRWPNSKWRCL+VRWDE SDHQE+VSPWEID S+SLP LSIQSSPR
Sbjct: 356 AGVVTGVCDLDPYRWPNSKWRCLLVRWDESFVSDHQERVSPWEIDPSISLPHLSIQSSPR 415
Query: 417 MKKLRTG-LQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHP- 474
K+ G L PP P++ R GG LDFEESVR SKVLQGQEN+G SP G D +N
Sbjct: 416 PKRPWAGLLDTTPPGNPITER-GGFLDFEESVRPSKVLQGQENIGSASPSQGFDVMNRRI 474
Query: 475 LGFEMRAPAHQSLALNGIRKDNINELV--RALPTSYTGFVESNRFPKVLQGQEICPLRSL 532
L F M++ A L L+ KD E V AL + +G ++ +RFP+VLQGQEIC L+S
Sbjct: 475 LDFAMQSHASPVL-LSSRVKDRFGEFVDATALNPACSGVMDLDRFPRVLQGQEICSLKSF 533
Query: 533 TGKVDLNLGTW-GKPNFGCNSMNMYQASKPNIYPPPSESLSNMFFPYGDMPKTVQHHTMP 591
+ GKPN G YQA+K + YP + + + PY +
Sbjct: 534 PQFAGFSPAVASGKPNLGYTDPFAYQANKSSFYPLALQGIRSTHVPYQN----------- 582
Query: 592 PYASNLQRENVKLNSSSIQMPAIGAEIRKANLLNEHKPVENIPTPT-FKANMRSHKDGS- 649
PY N ++ S +I G E RK + N N+ FK +M + GS
Sbjct: 583 PY--NAGNQSSGHPSRAIN---FGEETRKFDAQNGGGLPNNVTADLPFKIDMMGKQKGSD 637
Query: 650 FNGTA-AGCKLFGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLS 708
F+ A +GCKLFGFSL ETP + QS KR CTKVHKQGS VGRAIDL RLNGY+DLL+
Sbjct: 638 FDMNASSGCKLFGFSLPVETPASNPQSSSKRICTKVHKQGSQVGRAIDLSRLNGYDDLLT 697
Query: 709 ELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
ELE LFNMEGLLRDP KGWRILYTDSEND+MVVGDDPWH+FCN V KIH+YT+EEVE
Sbjct: 698 ELERLFNMEGLLRDPEKGWRILYTDSENDMMVVGDDPWHDFCNVVWKIHLYTKEEVEN-- 755
Query: 769 IGTTDDTQSCLDQAPVIMEVSVSKSSSVSQPDSSPTVVRV 808
DD +SCL+QA ++ME SKSSSVSQPDSSPT+ RV
Sbjct: 756 --ANDDNKSCLEQAAIMME--ASKSSSVSQPDSSPTITRV 791
>gi|15239335|ref|NP_200853.1| auxin response factor 4 [Arabidopsis thaliana]
gi|46396060|sp|Q9ZTX9.1|ARFD_ARATH RecName: Full=Auxin response factor 4
gi|12744969|gb|AAK06864.1|AF344313_1 auxin response factor 4 [Arabidopsis thaliana]
gi|4102598|gb|AAD01512.1| auxin response factor 4 [Arabidopsis thaliana]
gi|9757747|dbj|BAB08228.1| auxin response factor 4 [Arabidopsis thaliana]
gi|19424051|gb|AAL87308.1| auxin response factor ARF4 [Arabidopsis thaliana]
gi|21280887|gb|AAM45025.1| auxin response factor ARF4 [Arabidopsis thaliana]
gi|332009949|gb|AED97332.1| auxin response factor 4 [Arabidopsis thaliana]
Length = 788
Score = 897 bits (2317), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/759 (63%), Positives = 553/759 (72%), Gaps = 39/759 (5%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVD 116
IY ELWHACAGPLT LPKKGNVVVYFPQGHLEQ A S P+E+P FDL PQI C+VV+
Sbjct: 62 IYSELWHACAGPLTCLPKKGNVVVYFPQGHLEQDAMVSYSSPLEIPKFDLNPQIVCRVVN 121
Query: 117 VQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTL 176
VQLLANK+ DEVYTQV LLP E LN E K++++LG +EE G S K TPHMFCKTL
Sbjct: 122 VQLLANKDTDEVYTQVTLLPLQEFSMLNGEGKEVKELGGEEERNGSSSVKRTPHMFCKTL 181
Query: 177 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHL 236
TASDTSTHGGFSVPRRAAEDCF PLDYKQQRPSQEL+AKDLHGVEW+FRHIYRGQPRRHL
Sbjct: 182 TASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHL 241
Query: 237 LTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLS 296
LTTGWSIFVSQKNLVSGDAVLFLR + GELRLGIRR+ +PRNGLPDSI+ K NS N+LS
Sbjct: 242 LTTGWSIFVSQKNLVSGDAVLFLRDEGGELRLGIRRAARPRNGLPDSIIEK-NSCSNILS 300
Query: 297 VVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRC 356
+VANAVSTKSMFHVFYSPRATHA+FVIPY+KY+ I +P+CIGTRF+MRFEMDDSPERRC
Sbjct: 301 LVANAVSTKSMFHVFYSPRATHAEFVIPYEKYITSIRSPVCIGTRFRMRFEMDDSPERRC 360
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPR 416
GVVTG+ DLDPYRWPNSKWRCL+VRWDE SDHQE+VSPWEID SVSLP LSIQSSPR
Sbjct: 361 AGVVTGVCDLDPYRWPNSKWRCLLVRWDESFVSDHQERVSPWEIDPSVSLPHLSIQSSPR 420
Query: 417 MKKLRTG-LQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHP- 474
K+ G L PP P++ R GG LDFEESVR SKVLQGQEN+G SP G D +N
Sbjct: 421 PKRPWAGLLDTTPPGNPITKR-GGFLDFEESVRPSKVLQGQENIGSASPSQGFDVMNRRI 479
Query: 475 LGFEMRAPAHQSLALNGIRKDNINELVRA--LPTSYTGFVESNRFPKVLQGQEICPLRSL 532
L F M++ A+ L + + KD E V A + + +G ++ +RFP+VLQGQEIC L+S
Sbjct: 480 LDFAMQSHANPVLVSSRV-KDRFGEFVDATGVNPACSGVMDLDRFPRVLQGQEICSLKSF 538
Query: 533 TGKVDLNLGTWGKPNFGCNSMNMYQASKPNIYPPPSESLSNMFFPYGDMPKTVQHHTMPP 592
+ P YQA+K + YP + + PY + + PP
Sbjct: 539 PQFAGFSPAAAPNP-------FAYQANKSSYYPLALHGIRSTHVPYQNPYNAGNQSSGPP 591
Query: 593 YASNLQRENVKLNSSSIQMPAIGAEIRKANLLNEHKPVENIPTPT-FKANMRSHKDGS-F 650
S +I G E RK + NE N+ FK +M + GS
Sbjct: 592 -------------SRAIN---FGEETRKFDAQNEGGLPNNVTADLPFKIDMMGKQKGSEL 635
Query: 651 NGTA-AGCKLFGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSE 709
N A +GCKLFGFSL ETP QS KR CTKVHKQGS VGRAIDL RLNGY+DLL E
Sbjct: 636 NMNASSGCKLFGFSLPVETPASKPQSSSKRICTKVHKQGSQVGRAIDLSRLNGYDDLLME 695
Query: 710 LEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
LE LFNMEGLLRDP KGWRILYTDSEND+MVVGDDPWH+FCN V KIH+YT+EEVE
Sbjct: 696 LERLFNMEGLLRDPEKGWRILYTDSENDMMVVGDDPWHDFCNVVWKIHLYTKEEVEN--- 752
Query: 770 GTTDDTQSCLDQAPVIMEVSVSKSSSVSQPDSSPTVVRV 808
DD +SCL+QA ++ME SKSSSVSQPDSSPT+ RV
Sbjct: 753 -ANDDNKSCLEQAALMME--ASKSSSVSQPDSSPTITRV 788
>gi|379323198|gb|AFD01298.1| auxin response factor 4 [Brassica rapa subsp. pekinensis]
Length = 758
Score = 888 bits (2294), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/743 (62%), Positives = 533/743 (71%), Gaps = 59/743 (7%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVD 116
IY ELWHACAGPLTSLPKKGNVVVYFPQGHLEQ A S P+++P DL PQIFC+V +
Sbjct: 50 IYSELWHACAGPLTSLPKKGNVVVYFPQGHLEQGAMVSYSSPLDIPKLDLSPQIFCRVAN 109
Query: 117 VQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTL 176
V LLANKE DEVYTQV LLP EL LN E K++ +LG DEE G S K TPHMFCKTL
Sbjct: 110 VHLLANKETDEVYTQVTLLPLQELSVLNGEGKEVRELGGDEEKNGSSSVKKTPHMFCKTL 169
Query: 177 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHL 236
TASDTSTHGGFSVPRRAAEDCF PLDYKQQRPSQEL+AKDLHGVEW+FRHIYRGQPRRHL
Sbjct: 170 TASDTSTHGGFSVPRRAAEDCFAPLDYKQQRPSQELIAKDLHGVEWKFRHIYRGQPRRHL 229
Query: 237 LTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLS 296
LTTGWSIFVSQK+LVSGDAVLFLR ++GELRLGIRRS +PRNGLPDSI+ K +S ++LS
Sbjct: 230 LTTGWSIFVSQKSLVSGDAVLFLRDENGELRLGIRRSARPRNGLPDSIIQKYSS-SSILS 288
Query: 297 VVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRC 356
+VANAVS KSMFHVFYSPRATH++FVIPY+KY+ I NPICIGTRF+MRFEMDDSPERRC
Sbjct: 289 LVANAVSNKSMFHVFYSPRATHSEFVIPYEKYITSIKNPICIGTRFRMRFEMDDSPERRC 348
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPR 416
GVVTG+ D+DPYRWPNSKWRCL+VRWDE SDHQE+VSPWEID S SLPPLSIQSSPR
Sbjct: 349 AGVVTGVCDMDPYRWPNSKWRCLLVRWDESFMSDHQERVSPWEIDPSGSLPPLSIQSSPR 408
Query: 417 MKKLRTGL--QAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFV---SPLYGCDTV 471
K+ GL P P++ R GG LDFEESVR SKVLQGQEN+G SPL G D +
Sbjct: 409 PKRPWAGLLGTTTPQGNPITER-GGFLDFEESVRPSKVLQGQENIGSATSSSPLQGFDVM 467
Query: 472 NHP-LGFEMRAPAHQS-LALNGIRKDNINELVRALPTSYTGFVESNRFPKVLQGQEICPL 529
N L F +H + L L+ KD E V + ++ +RFP+VLQGQEIC L
Sbjct: 468 NRRILDFAGMQQSHANPLLLSSRVKDRFGEFVDSTS------LDLDRFPRVLQGQEICSL 521
Query: 530 RSLTGKVDLNLGTWGKPNFGCNSMNMYQASKPNIYPPPSESLSNMFFPY---GDMPKTVQ 586
RS L+ GK + G N YQA+K + YP S+ + + PY GD K++
Sbjct: 522 RSFPQIAGLSP---GKASLGYNGAFAYQANKTSFYPLASQGIRSSHIPYQSAGD--KSLS 576
Query: 587 HHTMPPYASNLQRENVKLNSSSIQMPAIGAEIRKANLLNEHKPVENIPTPTFKANMRSHK 646
H + S G + K +++ K E NM
Sbjct: 577 HPS----------------SRKFDAQGEGGGLPKIDMMGAEKGRE--------VNM---- 608
Query: 647 DGSFNGTAAGCKLFGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDL 706
N + GCKLFGFSL TP + QS KR CTKVHKQGSLVGRAIDL RLNGYNDL
Sbjct: 609 ----NASTTGCKLFGFSLPVGTPASNQQSSSKRICTKVHKQGSLVGRAIDLSRLNGYNDL 664
Query: 707 LSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEK 766
L+ELE LFNMEGLLRDP KGWRILYTDSEND+MVVGDDPWH+FC+ V KIH+YT+EEVE
Sbjct: 665 LTELERLFNMEGLLRDPEKGWRILYTDSENDMMVVGDDPWHDFCSVVLKIHLYTKEEVEN 724
Query: 767 MTIGTTDDTQSCLDQAPVIMEVS 789
DD +SCL+QA ++ME S
Sbjct: 725 ----GNDDNRSCLEQAALMMEAS 743
>gi|224104665|ref|XP_002313521.1| predicted protein [Populus trichocarpa]
gi|222849929|gb|EEE87476.1| predicted protein [Populus trichocarpa]
Length = 713
Score = 726 bits (1875), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 361/472 (76%), Positives = 401/472 (84%), Gaps = 22/472 (4%)
Query: 1 MEFDLNHAATTEGEKIAFC-NGDCGKNNSGCVCYLNSSSSSSSCSANSSSSSSLSSSIYF 59
ME DLNH T E EK +FC NGD S +++SSSS +SSSIY
Sbjct: 1 MEIDLNHPVT-EVEKNSFCTNGD-------------------SSCSSNSSSSPVSSSIYL 40
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
ELWHACAGPLTSLPKKGNVVVYFPQGHLEQ+ASSS F ++PNFDL PQIFCKVV+VQL
Sbjct: 41 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQLASSSPFSHRDMPNFDLHPQIFCKVVNVQL 100
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
LAN+ENDEVYT++ LLPQPE+ G +LE K+L++LGVD EG SPTKSTPHMFCKTLTAS
Sbjct: 101 LANRENDEVYTRLTLLPQPEVVGQDLEGKELQELGVDGEGDDASPTKSTPHMFCKTLTAS 160
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
DTSTHGGFSVPRRAAEDCFP LDYKQQRPSQEL+AKDLHGVEWRFRHIYRGQPRRHLLTT
Sbjct: 161 DTSTHGGFSVPRRAAEDCFPSLDYKQQRPSQELLAKDLHGVEWRFRHIYRGQPRRHLLTT 220
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVA 299
GWSIFVSQKNLVSGDAVLFLRG+ GELRLGIRR+ +PRNGLPDS+ KQNS P+ LS+V+
Sbjct: 221 GWSIFVSQKNLVSGDAVLFLRGEGGELRLGIRRAARPRNGLPDSVTGKQNSLPSALSLVS 280
Query: 300 NAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCNGV 359
NA+STKS+F V YSPRATHA FV+PYQKY+K I N +CIGTRFKMRFEMDDSPERRC+GV
Sbjct: 281 NAISTKSVFTVSYSPRATHAVFVVPYQKYIKSITNAVCIGTRFKMRFEMDDSPERRCSGV 340
Query: 360 VTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKK 419
VTG DLDPY+WPNSKWRCLMVRWDE + SDHQE+VSPWEID SVSLPPL IQSSPR+KK
Sbjct: 341 VTGTADLDPYKWPNSKWRCLMVRWDEDVISDHQERVSPWEIDASVSLPPLIIQSSPRLKK 400
Query: 420 LRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTV 471
LRTGLQA PPD P+ A GGG LDF+ESVRSSKVLQGQENVG +SP+Y C +
Sbjct: 401 LRTGLQAAPPDKPI-AGGGGFLDFKESVRSSKVLQGQENVGLLSPVYRCQEI 451
Score = 318 bits (816), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 177/307 (57%), Positives = 209/307 (68%), Gaps = 19/307 (6%)
Query: 508 YTGFVESNRFPKVLQGQE----ICPLRSLTGKVDLN-LGTWGKPNFGCNSMNMYQASKPN 562
+ F ES R KVLQGQE + P+ L+ +G GKPN G +S MY +P
Sbjct: 420 FLDFKESVRSSKVLQGQENVGLLSPVYRCQEICSLSSVGALGKPNTGRSSFQMYPGPRPA 479
Query: 563 IYPPPSESLSNMFFPYGDMPKTVQHHTMPPYASNLQRENVKLNSSSIQMPAIGAEIRKAN 622
YP +ESL +M+FPYGD+ K Q YA REN N+SSIQ + E+RK N
Sbjct: 480 FYPVAAESLRSMYFPYGDVYKNGQDPRTQSYAI-FSRENAHFNTSSIQTCVVREEVRKPN 538
Query: 623 LLNEHKPVENI-PTPTFKANMRSHKDGSFNGTAAGCKLFGFSLTSETPTPSSQSPGKRSC 681
+E+K E+I P AN+R+ KD FNG A GCKLFGFSL +ET +P+SQ+ KRSC
Sbjct: 539 QSSEYKTQESISAAPALCANLRNQKDDFFNGNATGCKLFGFSLNAET-SPNSQNTSKRSC 597
Query: 682 TKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVV 741
TKVHKQGSLVGRAIDL RLNGY+DLL+ELE LF+MEGLLR+P +GWRILYTDSENDVMVV
Sbjct: 598 TKVHKQGSLVGRAIDLSRLNGYSDLLNELERLFSMEGLLRNPEEGWRILYTDSENDVMVV 657
Query: 742 GDDPWHEFCNEVSKIHIYTQEEVEKMTIGTTDDTQSCLDQAPVIMEVSVSKSSSVSQPDS 801
GDDPW EFCN +KIHIYTQEEVEKMT+ +PVIME SKSSSV QPD
Sbjct: 658 GDDPWLEFCNVATKIHIYTQEEVEKMTL---------FGSSPVIME--ASKSSSVGQPDC 706
Query: 802 SPTVVRV 808
SPTV+RV
Sbjct: 707 SPTVIRV 713
>gi|291196871|emb|CAX63118.1| ARF4 protein [Amborella trichopoda]
Length = 748
Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/759 (52%), Positives = 503/759 (66%), Gaps = 56/759 (7%)
Query: 55 SSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPP--IEVPNFDLQPQIFC 112
SSI LWHACAGPLTSLPKKGNVVVYFPQGH+EQ ++S +++P+ L PQ+FC
Sbjct: 17 SSICLVLWHACAGPLTSLPKKGNVVVYFPQGHIEQALTASHLDEQQVQIPSXHLPPQVFC 76
Query: 113 KVVDVQLLANKENDEVYTQVALLPQPELEGLNLEA-KQLEDLGVDEEGGGRSPTKSTPHM 171
+V++V L A E DEVY QV L+P+PE E + A K L V+EE G KSTPHM
Sbjct: 77 RVLNVNLHAEPETDEVYAQVTLVPEPEPETESEPAEKSL----VEEEEGINLLHKSTPHM 132
Query: 172 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQ 231
FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDY QQRPSQELVAKDLHG+EW+FRHIYRGQ
Sbjct: 133 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGIEWKFRHIYRGQ 192
Query: 232 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLP-DSILSKQ-N 289
PRRHLLTTGWS+FV+Q+NLVSGDAVLFLRG DGELRLGIRR+ PR+ +P S+LS Q
Sbjct: 193 PRRHLLTTGWSLFVNQRNLVSGDAVLFLRGDDGELRLGIRRASHPRSIIPTHSVLSGQWG 252
Query: 290 SYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMD 349
S +VLS ANA+S+KSMFH+FY+PRA+ ++FVIPY+KYV+ I P+C+G RFKMRFEM+
Sbjct: 253 SQLSVLSAAANAISSKSMFHIFYNPRASPSEFVIPYRKYVRCINRPVCVGMRFKMRFEME 312
Query: 350 DSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPL 409
D+ ERRC+GV+TGI D+DP RWP+SKWRCLMVRWDE IG +H+ +VSPWEI+ SV P L
Sbjct: 313 DAAERRCSGVITGIGDIDPLRWPDSKWRCLMVRWDEDIGDEHRVRVSPWEIEPSVLPPAL 372
Query: 410 SIQSSPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCD 469
++ PR+KKLR L + D + GGG+L+ ESVRS KVLQGQE+ G + Y
Sbjct: 373 NV---PRLKKLRPSLPSGAADVVAVSTGGGLLEVRESVRSRKVLQGQEDAGSKTYYYA-- 427
Query: 470 TVNHPLGFEMRAPAHQSLALNGIRKDNINELVRALPTSYTGFVESNRFPKVLQGQEICPL 529
M +H L R RA GF E F KVLQGQEI PL
Sbjct: 428 ------NLRMGPGSHDPTVLGSARMGTNALTGRASDNISIGFGE---FHKVLQGQEIFPL 478
Query: 530 RSLTGKVDLNL-GTWGKPNFGCNSMNMYQASKPNIYPPPS-------------ESLSNMF 575
++ + D+ + G + N G +P SN +
Sbjct: 479 KA---QCDVPVSGNRSRENNGLRLEFFTGYQRPETVRTEVIDNSTHYQSNLRFYGASNAY 535
Query: 576 FPYGDMPKTVQHHTMPPYASNLQRENV---KLNSSSIQMPAIGAEIRKANLLNEHKPVEN 632
F +P V H +P +R+N +L SS Q ++ + + ++ V N
Sbjct: 536 FRSNQLPYDV--HNLPIINGLYERQNSWKPELVGSSQQT----MQVTEGSHSSQEDEVLN 589
Query: 633 IPTPTFKANMRSHKDGSFNGTAAGCKLFGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVG 692
P+ +++D + T CKLFG+SLT + ++ KRSCTKVHK GS VG
Sbjct: 590 HLLPSASVRKMNYQDETLART--NCKLFGYSLTEDNFLSNA---SKRSCTKVHKHGSAVG 644
Query: 693 RAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNE 752
R+IDL +LNGY+DL+SELE +FNMEGLL DP KGWR++YTD+END+++VGDDPW EFC+
Sbjct: 645 RSIDLSKLNGYSDLMSELEQIFNMEGLLHDPEKGWRVVYTDNENDMVLVGDDPWQEFCDV 704
Query: 753 VSKIHIYTQEEVEKM--TIGTTDDTQSCLDQAPVIMEVS 789
V KI I TQ++VE M ++ DD QSC ++APV++E+S
Sbjct: 705 VCKILICTQDDVENMSPSMLVNDDAQSCWEEAPVVIELS 743
>gi|301793219|emb|CBA12000.1| putative auxin response factor 3 [Illicium parviflorum]
Length = 837
Score = 672 bits (1733), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/824 (46%), Positives = 500/824 (60%), Gaps = 96/824 (11%)
Query: 59 FELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQ 118
ELW ACAGP+ SLP+KG +VVYFPQGHLEQ AF D+ P +FC+V++V
Sbjct: 32 LELWRACAGPVISLPRKGTIVVYFPQGHLEQAPKFRAFA------HDIPPHLFCRVLNVN 85
Query: 119 LLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTA 178
L A DEVY QV+L+P+PE+ +L+ + +E + +TPHMFCKTLTA
Sbjct: 86 LHAEIATDEVYAQVSLVPEPEVGAKSLDEDGEGNGEEEEI---EELSTATPHMFCKTLTA 142
Query: 179 SDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLT 238
SDTSTHGGFSVPRRAAEDCFP LDYKQQRPSQELVAKDLHGVEW+FRHIYRGQPRRHLLT
Sbjct: 143 SDTSTHGGFSVPRRAAEDCFPALDYKQQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLLT 202
Query: 239 TGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVV 298
TGWS FV+QK LVSGDAVLFLRG++GELRLGIRR+ +P G+P SIL QN + L+ V
Sbjct: 203 TGWSSFVNQKKLVSGDAVLFLRGENGELRLGIRRAARPEGGVPYSILCSQNLNLSALAAV 262
Query: 299 ANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCNG 358
+ AVSTKSMFHV+Y+PRA+ A+F+IPY+K+ K I P+ IGTRFKMR+E +D+ E+R G
Sbjct: 263 STAVSTKSMFHVYYNPRASPAEFIIPYRKFSKSINQPLSIGTRFKMRYETEDATEQRPTG 322
Query: 359 VVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMK 418
++TGI D+DP RWP SKWRCLMVRWDE G Q++VSPWEI+ S SL S +P K
Sbjct: 323 LITGIGDIDPVRWPGSKWRCLMVRWDEEAGHYCQDKVSPWEIEPSGSLSGFSSPLTPGSK 382
Query: 419 KLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHPLGFE 478
K R L + D+P G G+ DF ES+ KVLQGQE +GF +P D +NH L E
Sbjct: 383 KPRISLPSIKADFPFRD-GTGISDFGESLGFQKVLQGQEILGFKAPYGSIDGLNHHLS-E 440
Query: 479 MRAPAHQSLALNGIRKDNINELVRA----LPTSYTGFVESNRFPKVLQGQEICPLRSLTG 534
+R + + + R + GF ES++F KVLQGQEI PL+ G
Sbjct: 441 IRRCYPGANSSGIAGIGSGIGTPRGGTFEISDKRVGFGESDQFQKVLQGQEIFPLKQPYG 500
Query: 535 KVDLNLGTWGKPNFGCNSMNMYQASKPNIYPPPSESLSNMFFPYGD------------MP 582
+ +++ FG S+ +P P + + +
Sbjct: 501 RPQVDIRVHENSGFGLFEGFHMSGSR---WPLPVQGYATQVQSFKQSPEVSSPSSVLRFQ 557
Query: 583 KTVQHHTMPPYASNLQ-----RENVKLN--------SSSIQMPAIGA----EIRKAN--L 623
+ + + P +A + E +L+ SS Q+ ++ + E R+ L
Sbjct: 558 RGTNNVSYPYFAYGINHLPNVEEQGRLSGFFDRSKLSSGPQISSLSSIDCREDRRCMYPL 617
Query: 624 LNEHKPVENI-PTPTFKANMRSHKDGSFNGTAAGCKLFGFSLTSET-------------- 668
++P + PT K++ + + G GT+ C+LFGF LT E
Sbjct: 618 DQTNRPGNSFDPTLISKSDFKDRQSGEALGTS--CRLFGFPLTKEAPVANTVDPTPVASQ 675
Query: 669 -----------PTPSSQSPGK--------------RSCTKVHKQGSLVGRAIDLWRLNGY 703
PT +S PGK RSCTKVH+QG+LVGRAIDL +L+GY
Sbjct: 676 SAKDLDLKTCLPTANSMIPGKQLHAEVQSSTKTAGRSCTKVHRQGNLVGRAIDLSKLDGY 735
Query: 704 NDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEE 763
+DL++ELE LFNMEGLL DP KGW+++YTD E+D+M+VGDDPW EFCN VSKI IYT +E
Sbjct: 736 DDLITELERLFNMEGLLNDPGKGWQVVYTDDEDDMMLVGDDPWQEFCNIVSKILIYTHDE 795
Query: 764 VEKMTI-GTTDDTQSCLDQAPVIMEVSVSKSSSVSQPDSSPTVV 806
VE M GT+DD SC ++AP +V+ SS+ PDSSPT
Sbjct: 796 VELMVPGGTSDDAHSCSEEAP----ATVTSMSSLDCPDSSPTAT 835
>gi|449463651|ref|XP_004149545.1| PREDICTED: auxin response factor 4-like [Cucumis sativus]
gi|449524946|ref|XP_004169482.1| PREDICTED: auxin response factor 4-like isoform 2 [Cucumis sativus]
Length = 733
Score = 646 bits (1666), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/460 (71%), Positives = 375/460 (81%), Gaps = 12/460 (2%)
Query: 1 MEFDLNHAATTEGEKIAFCNGDCGKNNSGCVCYLNSSSSSSSCSANSSSSSSLSSSIYFE 60
ME DLN A+ G K A+C G+C + SSS+S +++SSS+ +SSS Y E
Sbjct: 1 MEIDLNQTASEVG-KNAYCYGNCEEG-----LCNCCLSSSTSSCSSNSSSTPVSSSTYLE 54
Query: 61 LWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQLL 120
LWHACAGPLTSLPKKGNVVVYFPQGHLEQ+AS+S F P+E+ FDLQP I C+V++V LL
Sbjct: 55 LWHACAGPLTSLPKKGNVVVYFPQGHLEQIASASPFSPMEMRTFDLQPHILCRVINVHLL 114
Query: 121 ANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRS---PTKSTPHMFCKTLT 177
ANKENDEVYTQ+ L P PEL G + K+LE+L ++ G S PT+STPHMFCKTLT
Sbjct: 115 ANKENDEVYTQLTLRPLPELLGTGVAGKELEELALNGADGDGSGGSPTRSTPHMFCKTLT 174
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAEDCFPPLDY Q RPSQEL+AKDLHGVEWRFRHIYRGQPRRHLL
Sbjct: 175 ASDTSTHGGFSVPRRAAEDCFPPLDYTQLRPSQELIAKDLHGVEWRFRHIYRGQPRRHLL 234
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWSIFVSQKNL+SGDAVLFLRG++GELRLGIRR+V+PRNGLPDSI+ QNS N L+
Sbjct: 235 TTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLAR 294
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCN 357
V A+STKS F VFY+PRA HA F+I QKYVK I NP+ +GTRFKMRFEMDDSPERR N
Sbjct: 295 VVKAISTKSTFDVFYNPRAYHAQFIISCQKYVKSINNPVSVGTRFKMRFEMDDSPERRFN 354
Query: 358 GVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRM 417
GVV GI+D+D +RWPNSKWRCL VRWD+ SDHQE+VSPWEID SVSLPPLS+QSSPR+
Sbjct: 355 GVVVGISDMDSFRWPNSKWRCLTVRWDK--DSDHQERVSPWEIDPSVSLPPLSVQSSPRL 412
Query: 418 KKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQE 457
KKLRT LQA PP+ + R GG +DFE+SVRSSKVLQGQE
Sbjct: 413 KKLRTSLQAAPPNNAFTGR-GGFMDFEDSVRSSKVLQGQE 451
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 178/303 (58%), Positives = 208/303 (68%), Gaps = 7/303 (2%)
Query: 508 YTGFVESNRFPKVLQGQEICPLRSLTGKVDLNLGTWGKPNFGCNSMNMYQASKPNIYPPP 567
+ F +S R KVLQGQEIC LR T K + +LG WGK N NS N +Q+ N Y
Sbjct: 434 FMDFEDSVRSSKVLQGQEICSLRPPTSKPEYSLGVWGKFNLSDNSFNTFQSPNSNFYHMA 493
Query: 568 SESLSNMFFPYGDMPKTVQHHTMPPYASNLQRENVKLNSSSIQMPAIGAEIRKAN--LLN 625
S S M+FP +M T Q M SN RE+ N S++ I ++ + + L
Sbjct: 494 SNSAQKMYFPRSEMHSTGQAAMMLSNDSNFPRESALFNPSAVGANVIRTKMERTSRSLDR 553
Query: 626 EHKPVENIPTPTFKANMRSHKDGSFNGTAAGCKLFGFSLTSETPTPSSQSPGKRSCTKVH 685
E + + P PT +NMR+ KD N A GCKLFGFSLT+ET T + QS GKRSCTKVH
Sbjct: 554 ESLHLASAP-PTLGSNMRNSKDEHVNDNATGCKLFGFSLTTETAT-NVQSSGKRSCTKVH 611
Query: 686 KQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGDDP 745
KQGSLVGRAIDL RLNGY DL+SELE LF+MEGLL+DP KGWR+LYTD+ENDVMVVGD P
Sbjct: 612 KQGSLVGRAIDLSRLNGYTDLISELERLFSMEGLLKDPDKGWRVLYTDNENDVMVVGDYP 671
Query: 746 WHEFCNEVSKIHIYTQEEVEKMTIGT-TDDTQSCLDQAPVIMEVSVSKSSSVSQPDSSPT 804
WH+FC+ VSKIHIYTQEEVEKMT G +DDTQSCLDQAP+ ME SKSSSV QPDS PT
Sbjct: 672 WHDFCDAVSKIHIYTQEEVEKMTNGVISDDTQSCLDQAPLCME--ASKSSSVGQPDSPPT 729
Query: 805 VVR 807
VR
Sbjct: 730 AVR 732
>gi|47496700|dbj|BAD19065.1| auxin response factor 5 [Cucumis sativus]
Length = 733
Score = 645 bits (1665), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/460 (71%), Positives = 375/460 (81%), Gaps = 12/460 (2%)
Query: 1 MEFDLNHAATTEGEKIAFCNGDCGKNNSGCVCYLNSSSSSSSCSANSSSSSSLSSSIYFE 60
ME DLN A+ G K A+C G+C + SSS+S +++SSS+ +SSS Y E
Sbjct: 1 MEIDLNQTASEVG-KNAYCYGNCEEG-----LCNCCLSSSTSSCSSNSSSTPVSSSTYLE 54
Query: 61 LWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQLL 120
LWHACAGPLTSLPKKGNVVVYFPQGHLEQ+AS+S F P+E+ FDLQP I C+V++V LL
Sbjct: 55 LWHACAGPLTSLPKKGNVVVYFPQGHLEQIASASPFSPMEMRTFDLQPHILCRVINVHLL 114
Query: 121 ANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRS---PTKSTPHMFCKTLT 177
ANKENDEVYTQ+ L P PEL G + K+LE+L ++ G S PTKSTPHMFCKTLT
Sbjct: 115 ANKENDEVYTQLTLRPLPELLGTGVAGKELEELALNGADGDGSGGSPTKSTPHMFCKTLT 174
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAEDCFPPLDY Q RPSQEL+AKDLHGVEWRFRHIYRGQPRRHLL
Sbjct: 175 ASDTSTHGGFSVPRRAAEDCFPPLDYTQLRPSQELIAKDLHGVEWRFRHIYRGQPRRHLL 234
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWSIFVSQKNL+SGDAVLFLRG++GELRLGIRR+V+PRNGLPDSI+ QNS N L+
Sbjct: 235 TTGWSIFVSQKNLISGDAVLFLRGENGELRLGIRRAVRPRNGLPDSIVGNQNSCANDLAR 294
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCN 357
V A+STKS F VFY+PRA HA F+I QKYVK I NP+ +GTRFKMRFEMDDSPER+ N
Sbjct: 295 VVKAISTKSTFDVFYNPRAYHAQFIISCQKYVKSINNPVSVGTRFKMRFEMDDSPERKFN 354
Query: 358 GVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRM 417
GVV GI+D+D +RWPNSKWRCL VRWD+ SDHQE+VSPWEID SVSLPPLS+QSSPR+
Sbjct: 355 GVVVGISDMDSFRWPNSKWRCLTVRWDK--DSDHQERVSPWEIDPSVSLPPLSVQSSPRL 412
Query: 418 KKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQE 457
KKLRT LQA PP+ + R GG +DFE+SVRSSKVLQGQE
Sbjct: 413 KKLRTSLQAAPPNNAFTGR-GGFMDFEDSVRSSKVLQGQE 451
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 178/303 (58%), Positives = 208/303 (68%), Gaps = 7/303 (2%)
Query: 508 YTGFVESNRFPKVLQGQEICPLRSLTGKVDLNLGTWGKPNFGCNSMNMYQASKPNIYPPP 567
+ F +S R KVLQGQEIC LR T K + +LG WGK N NS N +Q+ N Y
Sbjct: 434 FMDFEDSVRSSKVLQGQEICSLRPPTSKPEYSLGVWGKFNLSDNSFNTFQSPNSNFYHMA 493
Query: 568 SESLSNMFFPYGDMPKTVQHHTMPPYASNLQRENVKLNSSSIQMPAIGAEIRKAN--LLN 625
S S M+FP +M T Q M SN RE+ N S++ I ++ + + L
Sbjct: 494 SNSAQKMYFPRSEMHSTGQAAMMLSNDSNFPRESALFNPSAVGANVIRTKMERTSRSLDR 553
Query: 626 EHKPVENIPTPTFKANMRSHKDGSFNGTAAGCKLFGFSLTSETPTPSSQSPGKRSCTKVH 685
E + + P PT +NMR+ KD N A GCKLFGFSLT+ET T + QS GKRSCTKVH
Sbjct: 554 ESLHLASAP-PTLGSNMRNSKDEHVNDNATGCKLFGFSLTTETAT-NVQSSGKRSCTKVH 611
Query: 686 KQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGDDP 745
KQGSLVGRAIDL RLNGY DL+SELE LF+MEGLL+DP KGWR+LYTD+ENDVMVVGD P
Sbjct: 612 KQGSLVGRAIDLSRLNGYTDLISELERLFSMEGLLKDPDKGWRVLYTDNENDVMVVGDYP 671
Query: 746 WHEFCNEVSKIHIYTQEEVEKMTIGT-TDDTQSCLDQAPVIMEVSVSKSSSVSQPDSSPT 804
WH+FC+ VSKIHIYTQEEVEKMT G +DDTQSCLDQAP+ ME SKSSSV QPDS PT
Sbjct: 672 WHDFCDAVSKIHIYTQEEVEKMTNGVISDDTQSCLDQAPLCME--ASKSSSVGQPDSPPT 729
Query: 805 VVR 807
VR
Sbjct: 730 AVR 732
>gi|291196869|emb|CAX63117.1| ETTIN protein [Amborella trichopoda]
Length = 840
Score = 634 bits (1636), Expect = e-179, Method: Compositional matrix adjust.
Identities = 384/822 (46%), Positives = 491/822 (59%), Gaps = 107/822 (13%)
Query: 54 SSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCK 113
+ ++ E+W ACAG L SLP+KG+VVVYF QGHLEQ +S + L PQ+FC+
Sbjct: 23 AGTVCLEVWQACAGSLISLPRKGSVVVYFXQGHLEQAGAS-------CDGWGLPPQVFCR 75
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDE-EGGGRSPTKSTPHMF 172
V++V L A++ +DEVY QV+L P PE L +++ + G +E E RS +TPHMF
Sbjct: 76 VINVNLHADQVSDEVYAQVSLTPIPEPVEKGLPEEEVREDGEEEFEFVSRS---ATPHMF 132
Query: 173 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQP 232
CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHG EW+FRHIYRGQP
Sbjct: 133 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGFEWKFRHIYRGQP 192
Query: 233 RRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNG-LPDSILSKQNSY 291
RRHLLTTGWS+FV+QK LV+GDAVLFLRG+ GELRLGIRR+ +PR G +P L QN
Sbjct: 193 RRHLLTTGWSVFVNQKKLVAGDAVLFLRGESGELRLGIRRAGRPRGGSVPSLALLSQNLS 252
Query: 292 PNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDS 351
+ + V+ AVSTKS+FHV Y+PRA+ A+F++PY KY K +G RFKM+ E +D+
Sbjct: 253 GSTFAAVSKAVSTKSVFHVSYNPRASPAEFIVPYWKYYKNFNQQFSLGMRFKMKIETEDT 312
Query: 352 PERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSL----P 407
ERRC G+++G+ D+DP RWP SKWRCLMVRWDE G+D ++VSPWEID S+ P
Sbjct: 313 AERRCTGLISGVGDIDPVRWPGSKWRCLMVRWDEDSGNDRLDRVSPWEIDLLGSVPVFSP 372
Query: 408 PLSIQSSPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYG 467
P + PR+ PPD G DF ESVR KVLQGQE GF P
Sbjct: 373 PATGLKRPRISLPSIQTGCSPPD------GSRFSDFGESVRFHKVLQGQEKSGFSKPY-- 424
Query: 468 CDTVNHPLGFEMR-APAHQSLALNGIRKDNINELVRALP----TSYTGFVESNRFPKVLQ 522
D+ +H L R P+ S + + I + P ++ GF ES+RF KVLQ
Sbjct: 425 -DSSSHQLLESRRFIPSINSPMSSEFVRGAIQTPLGVGPFISSSNSIGFEESDRFHKVLQ 483
Query: 523 GQEICPLRSLTGK---VDLNLGT---WGKPNFGCNSMNMYQASKPNIYPPPSESLSNMFF 576
GQEI L+S + +L++GT + P G + P +P S S F
Sbjct: 484 GQEIFHLKSQNNRERNSELSVGTLEGYPIPITGERWSVLPLQGHPAQFP---LSPSTPRF 540
Query: 577 PYGDMPK---TVQHHTMPPYASNLQRENVKLN---SSSIQMPAIGAEIRKANLLNEHKPV 630
P + + + H PP +++ S + + A G E+ K LNE P
Sbjct: 541 PTPSLLRFHGSGSHLLHPPLVPQDINNTLRIAEQPSGNFSLLACG-EVSKGP-LNE-SPC 597
Query: 631 ENI------------PTPTFKANMRSHKDGSFNGTAAGCKLFGFSLTSETP--------- 669
+++ PT F+ +++ KDG+ N + C+LFGFSLT E P
Sbjct: 598 DSLKKKSQAPDVCAPPTDAFRVDIKDGKDGATNARNSCCRLFGFSLTEEPPLSNEAMDPA 657
Query: 670 --------------------------TPSSQSPGK---------RSCTKVHKQGSLVGRA 694
T QS K RSCTKVHKQGS+VGRA
Sbjct: 658 HVSLSSNDDFNSKSSFQPSTWTVSCETQQKQSESKSQCLNKTANRSCTKVHKQGSMVGRA 717
Query: 695 IDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVS 754
I+L + GY+DL+SELE LFNMEGLL DP KGW+++YTDS++D+M+VGDDPW EFCN VS
Sbjct: 718 INLSKFEGYDDLISELERLFNMEGLLNDPKKGWQVVYTDSDDDMMLVGDDPWQEFCNIVS 777
Query: 755 KIHIYTQEEVEKM--TIGTTDDTQSCLDQAPVIMEVSVSKSS 794
KI IYT +EVEKM + +DD QSC ++AP SKSS
Sbjct: 778 KILIYTHDEVEKMIPVVVASDDAQSCSEEAPTTT-TEASKSS 818
>gi|357472327|ref|XP_003606448.1| Auxin response factor [Medicago truncatula]
gi|355507503|gb|AES88645.1| Auxin response factor [Medicago truncatula]
Length = 471
Score = 620 bits (1598), Expect = e-174, Method: Compositional matrix adjust.
Identities = 323/450 (71%), Positives = 366/450 (81%), Gaps = 21/450 (4%)
Query: 1 MEFDLNHAATTEGEKIAFCNGDCGKNNSGCVCYLNSSSSSSSCSANSSSSSSLSSSIYFE 60
ME DLN+ E EK A C+ +C K CV S S S ++SSS+S L SS Y E
Sbjct: 1 MEIDLNNEVI-EVEKNALCHKECEKGFCFCV-----SCLSPSTCSSSSSTSPLVSSSYLE 54
Query: 61 LWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQLL 120
LWHACAGPLTSLPKKGNVVVYFPQGHLEQ AS S F +E+PN+DLQPQIFC+VV+VQLL
Sbjct: 55 LWHACAGPLTSLPKKGNVVVYFPQGHLEQFASFSPFKQLEIPNYDLQPQIFCRVVNVQLL 114
Query: 121 ANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASD 180
ANKENDEVYTQV LLPQ EL G+++E K++E+L DEEG G SPTKSTPHMFCKTLT SD
Sbjct: 115 ANKENDEVYTQVTLLPQAELAGMHMEGKEVEELEGDEEGDGGSPTKSTPHMFCKTLTVSD 174
Query: 181 TSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTG 240
TSTHGGFSVPRRAAEDCFPPLDYK QRPSQELVAKDLHGVEW+FRHIYRGQPRRHLLTTG
Sbjct: 175 TSTHGGFSVPRRAAEDCFPPLDYKLQRPSQELVAKDLHGVEWKFRHIYRGQPRRHLLTTG 234
Query: 241 WSIFVSQKNLVSGDAVLFLRGKD--------------GELRLGIRRSVQPRNGLPDSILS 286
WSIFV+QKNLVSGDAVLFLRG+D GELRLGIRR+V+PRNGLP+SI+
Sbjct: 235 WSIFVNQKNLVSGDAVLFLRGQDCVHLSSPDLTWGQNGELRLGIRRAVRPRNGLPESIVG 294
Query: 287 KQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRF 346
QN YPN LS VANA+STKSMFHVFYSPRA+HA+FV+PYQKYVK I NP+ IGTRFKMR
Sbjct: 295 NQNCYPNFLSSVANAISTKSMFHVFYSPRASHAEFVVPYQKYVKSIKNPMTIGTRFKMRI 354
Query: 347 EMDDSPERRC-NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS 405
EMD+SPERRC +G++ GI DLDPYRWP SKWRCLMVRWD+ ++HQ++VSPWEID S
Sbjct: 355 EMDESPERRCSSGMLIGINDLDPYRWPKSKWRCLMVRWDDDTETNHQDRVSPWEIDPSSP 414
Query: 406 LPPLSIQSSPRMKKLRTGLQAPPPDYPVSA 435
PPLSIQSSPR+KK RTGL P++ ++
Sbjct: 415 QPPLSIQSSPRLKKPRTGLLVASPNHLITG 444
>gi|291196879|emb|CAX63130.1| ARF-L1 protein [Ephedra distachya]
Length = 905
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 354/890 (39%), Positives = 467/890 (52%), Gaps = 184/890 (20%)
Query: 55 SSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASS---SAFPPIEVPNFDLQPQIF 111
SSI ELWHACAGPL SLPKKG +VVYFPQGH+EQ++S+ P + +DL PQIF
Sbjct: 35 SSICMELWHACAGPLISLPKKGALVVYFPQGHIEQLSSTFKQQPPLPPPMSPYDLPPQIF 94
Query: 112 CKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHM 171
C+V++V LLA++E DEV+ QV L+P+PE G N + ++ ++ V +K T HM
Sbjct: 95 CRVLNVNLLADQETDEVFAQVTLVPEPEPVGDNFQDEENQNASV--------LSKPTLHM 146
Query: 172 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQ 231
FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDY QQRPSQEL+AKDLHGVEW+FRHIYRGQ
Sbjct: 147 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQQRPSQELLAKDLHGVEWKFRHIYRGQ 206
Query: 232 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSY 291
PRRHLLTTGWS+FVS K L AVLFLRG++GELRLGIRR+ + + +P S+ S QN Y
Sbjct: 207 PRRHLLTTGWSVFVSPKVLSLXYAVLFLRGENGELRLGIRRNNRKLSSVPSSVFSDQNVY 266
Query: 292 PNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDS 351
+V++ NAV+TKSMFH+FY+PRA+ A+F+IPYQKYV+ + +GTRF+M+FE +D+
Sbjct: 267 LSVIAAATNAVATKSMFHIFYNPRASPAEFIIPYQKYVRSCKQSLLVGTRFRMKFESEDT 326
Query: 352 PERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSI 411
E+R G+VT I D DP +WP SKWR L V WDE ++ QE+VSPWEI+ S+++ +++
Sbjct: 327 AEKRYTGIVTSIGDADPVKWPGSKWRSLKVDWDEHSLNERQERVSPWEIEPSIAVSGVNV 386
Query: 412 QSSPRMKKLRT------------------------------------------------- 422
S R K+LR
Sbjct: 387 SSGTRCKRLRANLPVSVDNGTSDGGRLSDFGESVRLSKVLQGQENVPFKAPSNGAVLFGE 446
Query: 423 --GLQAPPPDYPVSARGGGV-------------LDFEESVRSSKVLQGQENVGFVSPLYG 467
GL A P ++ + G + +DF ES R KVLQGQE F +PL
Sbjct: 447 PRGLDAVPKNFETARIEGDIWSSVRRSELSNRFVDFGESTRFQKVLQGQEISPFKAPLQS 506
Query: 468 CDTVNHPLGFEMRAPAHQSLALNGIRKDNINELVRALPTSYTGFVESNRFPKVLQGQEIC 527
+ M+ H+ L + + + T GF + F V Q+
Sbjct: 507 SGVDLRRQLWNMKDCNHELLERAMVGNGSWVSVGHGTVTHSRGFTDDREFVGVHSSQKRN 566
Query: 528 PL----RSLTGKVDLNLGTWGKPNFGCNSMNMYQASKPNIYPPPSE----SLSNMFFPY- 578
PL K N T S Y + + PPS +SNM P
Sbjct: 567 PLGHSFSEFPSKQQKNCST------ETESQRNYSTQLSHFHSPPSNPRGSHISNMLSPLV 620
Query: 579 --------GDMP----KTVQHHTMPPYASNLQRENVKLNSS-----SIQMPAI-----GA 616
P T + + Y+ L E V + + Q P+I G
Sbjct: 621 VDDSGFYAAKHPLWKTNTCKRNGYTDYSQPLSWEAVTKHDTLKTVGERQFPSISCHDSGL 680
Query: 617 EIRKANLLNEHKPVE---------NIPTPTFKANMRSHKDGSFNGTAAGCKLFGFSLTSE 667
K+NL+ + P + +P P +++ G+ CKLFG SLT E
Sbjct: 681 SFLKSNLVGHNYPEKRFESADIACTLPGPPMLSSV-----GNDKIEKHSCKLFGISLTEE 735
Query: 668 TPTPSSQSPG----------KRSCTKVH-------------------------------- 685
P + G K TK H
Sbjct: 736 LPCVAVTEKGDFGKHEGMDIKSFTTKSHINFGSSPNYFSHPEPFKGFKERAKLSTEQEIS 795
Query: 686 ---------------KQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRIL 730
KQGS+VGRAIDL + +GY+ L++ELE LF+MEGLL +P KGW+++
Sbjct: 796 FPIQPTIVRKCTKVHKQGSVVGRAIDLSKFDGYDQLINELERLFDMEGLLNNPEKGWQVV 855
Query: 731 YTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGT-TDDTQSCL 779
YTD+E+DVM+VGDDPW EFCN V KI IYT +EV+K+ G +D+ SC
Sbjct: 856 YTDNEDDVMLVGDDPWQEFCNIVCKILIYTHDEVQKLRPGMFSDEAVSCF 905
>gi|291196863|emb|CAX63111.1| ARF4 protein [Cabomba aquatica]
Length = 709
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 325/643 (50%), Positives = 407/643 (63%), Gaps = 54/643 (8%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIE-----VPNFDLQPQI 110
I ELWHACAGPL LPKKG+ VVYFPQGHLEQV A+SS F +E + +DL PQI
Sbjct: 47 ICLELWHACAGPLIYLPKKGHTVVYFPQGHLEQVLAASSYFKSLEHHQIRMLTYDLPPQI 106
Query: 111 FCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPH 170
FC+V+DV+L A++END+VY QV LLP ELE + K LE+ DEE G K+ PH
Sbjct: 107 FCRVLDVKLHADQENDDVYAQVTLLP--ELESNEVCGKNLEE---DEESGSEILCKTIPH 161
Query: 171 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRG 230
MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDY QQRPSQELVAKDLHG EW+FRHIYRG
Sbjct: 162 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKFRHIYRG 221
Query: 231 QPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNS 290
QPRRHLLTTGWS+FV+QK LVSGDAVLFLRG+DGELRLGIRR+ +P + +P S+LS Q
Sbjct: 222 QPRRHLLTTGWSVFVNQKGLVSGDAVLFLRGEDGELRLGIRRASRPPSSIPYSVLSSQGL 281
Query: 291 YPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDD 350
+ ++LS ANA+STKSMFHVFYSPRA+ ++FVIPY KYVK + PI IG RFKMR EM+D
Sbjct: 282 HLSILSPAANALSTKSMFHVFYSPRASPSEFVIPYWKYVKSLSRPISIGMRFKMRLEMED 341
Query: 351 SPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLS 410
S E+RC G +TG D+DP RWPNSKWRCLMVRWD+ QE+VSPWEI+ S+SLP LS
Sbjct: 342 SAEKRCTGAITGACDVDPLRWPNSKWRCLMVRWDDSSLVGRQERVSPWEIEPSLSLPALS 401
Query: 411 IQSSPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDT 470
+PR+K+L+T L + + G L+F E+VRS KVLQGQENV F LY D
Sbjct: 402 CPVAPRIKRLQTCLMS-------TLDGMNPLEFAETVRSHKVLQGQENVAFAPTLYRSDP 454
Query: 471 VNHPLGFEMRAPAHQSLALNGIRKDNINE-LVRALP---TSYTGFVESNRFPKVLQGQEI 526
++ F++ P+ + L + + I + R++P + E KV QGQE+
Sbjct: 455 TDNYSEFKIWNPSQKPLQPPMLETNAIGYPVARSVPPGICTSRDLHEHELRHKVFQGQEV 514
Query: 527 CPLRSLTGKVDLNLGTWGKPNFGCNSMNMYQASKPNIYPPPSESLS-----------NMF 575
P LT K + G W N+ + +P+ P ++++ NM+
Sbjct: 515 FP---LTSKPLVESGRWVWKNYKQGLGELSANERPDCANFPGQNVTDTSVSSAFLQPNMW 571
Query: 576 FPYGDMPKTVQHHTMPPYASNLQRENVKLNSSSIQMPAIGAEIRKANL-----LNE---- 626
YG H M E++ S+S+ P + + L E
Sbjct: 572 RIYGGS----SHGFMNKSYDVESSESMCFRSNSLTSPKSNQSVVYSGTEYLEPLEECHQY 627
Query: 627 -HKPVENIPTPTFKANMRSHKDGSFNGTAAGCKLFGFSLTSET 668
K + + TPT + + +S K G+ GCKLFGF L ET
Sbjct: 628 GRKCLATVTTPTSR-DKQSDKGGN---ARKGCKLFGFPLNLET 666
>gi|291196873|emb|CAX63120.1| ARF4 protein [Amborella trichopoda]
Length = 638
Score = 566 bits (1458), Expect = e-158, Method: Compositional matrix adjust.
Identities = 330/651 (50%), Positives = 414/651 (63%), Gaps = 54/651 (8%)
Query: 55 SSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPP--IEVPNFDLQPQIFC 112
SSI LWHACAGPLTSLPKKGNVVVYFPQGH+EQ ++S +++P+ L PQ+FC
Sbjct: 17 SSICLVLWHACAGPLTSLPKKGNVVVYFPQGHIEQALTASHLDEQQVQIPSXHLPPQVFC 76
Query: 113 KVVDVQLLANKENDEVYTQVALLPQPELEGLNLEA-KQLEDLGVDEEGGGRSPTKSTPHM 171
+V++V L A E DEVY QV L+P+PE E + A K L V+EE G KSTPHM
Sbjct: 77 RVLNVNLHAEPETDEVYAQVTLVPEPEPETESEPAEKSL----VEEEEGINLLHKSTPHM 132
Query: 172 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQ 231
FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDY QQRPSQELVAKDLHG+EW+FRHIYRGQ
Sbjct: 133 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGIEWKFRHIYRGQ 192
Query: 232 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLP-DSILSKQ-N 289
PRRHLLTTGWS+FV+Q+NLVSGDAVLFLRG DGELRLGIRR+ PR+ +P S+LS Q
Sbjct: 193 PRRHLLTTGWSLFVNQRNLVSGDAVLFLRGDDGELRLGIRRASHPRSIIPTHSVLSGQWG 252
Query: 290 SYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMD 349
S +VLS ANA+S+KSMFH+FY+PRA+ ++FVIPY+KYV+ I P+C+G RFKMRFEM+
Sbjct: 253 SQLSVLSAAANAISSKSMFHIFYNPRASPSEFVIPYRKYVRCINRPVCVGMRFKMRFEME 312
Query: 350 DSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPL 409
D+ ERRC+GV+TGI D+DP RWP+SKWRCLMVRWDE IG +H+ +VSPWEI+ SV P L
Sbjct: 313 DAAERRCSGVITGIGDIDPLRWPDSKWRCLMVRWDEDIGDEHRVRVSPWEIEPSVLPPAL 372
Query: 410 SIQSSPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCD 469
++ PR+KKLR L + D + GGG+L+ ESVRS KVLQGQE+ G + Y
Sbjct: 373 NV---PRLKKLRPSLPSGAADVVAVSTGGGLLEVRESVRSRKVLQGQEDAGSKTYYYA-- 427
Query: 470 TVNHPLGFEMRAPAHQSLALNGIRKDNINELVRALPTSYTGFVESNRFPKVLQGQEICPL 529
M +H L R RA GF E F KVLQGQEI PL
Sbjct: 428 ------NLRMGPGSHDPTVLGSARMGTNALTGRASDNISIGFGE---FHKVLQGQEIFPL 478
Query: 530 RSLTGKVDLNL-GTWGKPNFGCNSMNMYQASKPNIYPPPS-------------ESLSNMF 575
++ + D+ + G + N G +P SN +
Sbjct: 479 KA---QCDVPVSGNRSRENNGLRLEFFTGYQRPETVRTEVIDNSTHYQSNLRFYGASNAY 535
Query: 576 FPYGDMPKTVQHHTMPPYASNLQRENV---KLNSSSIQMPAIGAEIRKANLLNEHKPVEN 632
F +P V H +P +R+N +L SS Q ++ + + ++ V N
Sbjct: 536 FRSNQLPYDV--HNLPIINGLYERQNSWKPELVGSSQQT----MQVTEGSHSSQEDEVLN 589
Query: 633 IPTPTFKANMRSHKDGSFNGTAAGCKLFGFSLTSETPTPSSQSPGKRSCTK 683
P+ +++D + T CKLFG+SLT + ++ KRSCTK
Sbjct: 590 HLLPSASVRKMNYQDETLART--NCKLFGYSLTEDNFLSNA---SKRSCTK 635
>gi|291196881|emb|CAX63133.1| ARF-L1 protein [Ginkgo biloba]
Length = 958
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 283/510 (55%), Positives = 354/510 (69%), Gaps = 51/510 (10%)
Query: 55 SSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIE---VPNFDLQPQIF 111
+SI ELWHACAGPL SLP+KG++VVYFPQGH+EQV +S +E + +DL PQIF
Sbjct: 30 TSICLELWHACAGPLISLPRKGSLVVYFPQGHMEQVTTSLKHQCLEQRQMRPYDLPPQIF 89
Query: 112 CKVVDVQLLANKENDEVYTQVALLPQPE-LEGLNLEAKQLEDLGVDEEGGGRSPTKSTPH 170
C+V++V L A++E DEVY QV L+P+PE E E ++ E+ GV KSTPH
Sbjct: 90 CRVLNVNLHADQETDEVYAQVTLVPEPEPAEKDLEEEEEDEEAGV--------LNKSTPH 141
Query: 171 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRG 230
MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDY QQRPSQELVAKDLHGVEWRFRHIYRG
Sbjct: 142 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELVAKDLHGVEWRFRHIYRG 201
Query: 231 QPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNS 290
QPRRHLLTTGWS+FV+ K L+SGDAVLFLRG++GELRLGIRR+ + ++ +P S+LS Q+
Sbjct: 202 QPRRHLLTTGWSVFVNHKGLMSGDAVLFLRGENGELRLGIRRAARQQSVIPSSVLSSQSM 261
Query: 291 YPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDD 350
+ VL+ ANAV+TKSMFH+FY+PRA+ A+F+IPY KYVK P+ IG RFKMRFE +D
Sbjct: 262 HLGVLASAANAVATKSMFHIFYNPRASPAEFLIPYHKYVKSCNLPLSIGMRFKMRFETED 321
Query: 351 SPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLS 410
+ ERR G++TGI D+DP +WP SKWR LMV WDE ++ QE+VSPWEI+ +S+ L+
Sbjct: 322 TAERRYTGIITGIGDVDPAKWPGSKWRSLMVGWDEHAANEQQERVSPWEIEPCISVAGLN 381
Query: 411 IQSSPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSP------ 464
+ S R+K+L+T L + P D+ + GG +LDF ESVR KVLQGQE + F +P
Sbjct: 382 VSSGTRIKRLKTSLPSTPVDF-ATPDGGRLLDFGESVRFQKVLQGQEMMPFRAPSRIDGV 440
Query: 465 ---------LYGCDTVNHPLGFEMRAPAHQSLALNGIRKDNINEL-----VRALPTSYTG 510
GCDTV LG R NE+ + + +
Sbjct: 441 DLMKCRILDYKGCDTVVEGLG----------------RTRTGNEIQSSVGISDISSRILD 484
Query: 511 FVESNRFPKVLQGQEICPLRS--LTGKVDL 538
F ES RF KVLQGQEI L++ + +VDL
Sbjct: 485 FGESVRFQKVLQGQEIVSLKAPHKSAEVDL 514
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 100/223 (44%), Positives = 139/223 (62%), Gaps = 7/223 (3%)
Query: 588 HTMPPYASNLQRENVKLNSS-SIQMPAIGAEIRKANLLNEHKPVENIPTPTFKANMRSHK 646
H+ + +L E+ ++ + S ++P G + ++ ++ +PV++ ++
Sbjct: 741 HSCKLFGFSLIEESACIDDAISSRIPRAGVTMNFLHMAHDQEPVQSSILRNLDQPLKDLH 800
Query: 647 DGSFNGTAAGCKLFGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDL 706
D S G + F S+ PT S R CTKVHKQG++VGRA+DL +L+GY++L
Sbjct: 801 DHS-EGLESSEHQITFQTISKVPT--SVPALGRKCTKVHKQGNIVGRAVDLSKLDGYDEL 857
Query: 707 LSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEK 766
+SELE LFNMEGLL DP KGW+++YTD+END+M+VGDDPW EFCN V KI IYT EEVEK
Sbjct: 858 ISELERLFNMEGLLNDPEKGWQVVYTDNENDIMLVGDDPWQEFCNIVCKILIYTHEEVEK 917
Query: 767 MTIGT-TDDTQSCLDQAPVIMEVSVSKSSSVSQPDSSPTVVRV 808
M G +DD QSC D+ P I+E VSKSS Q SP R+
Sbjct: 918 MAPGMFSDDAQSCSDEQPAIIE--VSKSSIDCQDSCSPPATRI 958
>gi|147770011|emb|CAN65414.1| hypothetical protein VITISV_009739 [Vitis vinifera]
Length = 831
Score = 520 bits (1339), Expect = e-144, Method: Compositional matrix adjust.
Identities = 329/762 (43%), Positives = 424/762 (55%), Gaps = 115/762 (15%)
Query: 52 SLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIF 111
S +SS+ ELWHACAGPL SLPKKG++VVYFPQGHLEQ+ S +P + +DL P +F
Sbjct: 41 SAASSVCLELWHACAGPLISLPKKGSLVVYFPQGHLEQL---SDYPAVA---YDLPPHVF 94
Query: 112 CKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHM 171
C+VVDV+L A DEVY QV+L+P+ +++ L+ ++E G +EE S TPHM
Sbjct: 95 CRVVDVKLHAEVVTDEVYAQVSLVPETKIKQ-KLQEGEIEADGGEEEDIEGSIKSMTPHM 153
Query: 172 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQ 231
FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHG EWRFRHIYRGQ
Sbjct: 154 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGFEWRFRHIYRGQ 213
Query: 232 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSY 291
PRRHLLTTGWS FV++K LVSGDAVLFLRG DGELRLGIRR+ Q + P L Q
Sbjct: 214 PRRHLLTTGWSAFVNKKKLVSGDAVLFLRGGDGELRLGIRRAAQIKGSSPFPALCSQQLN 273
Query: 292 PNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDS 351
N L+ V NA+ST+S+F++ Y+PRA+ ++F+IP +K+ K I + G RFKMR E +D+
Sbjct: 274 LNTLTAVVNAISTRSVFNICYNPRASSSEFIIPLRKFSKSIDHSFSAGMRFKMRVETEDA 333
Query: 352 PERRCNGVVTGITDLDPYRWPNSKWRCLM------------------------------V 381
ERR G++TGI+D+DP RWP SKWRCL+ V
Sbjct: 334 AERRYTGLITGISDMDPVRWPGSKWRCLLLHHSHGSECVLLPCLPYYSDSATFFDLSLQV 393
Query: 382 RWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGGVL 441
RWD+ I ++ +VSPWEI+ S SL + P K+ R GL PD+ V G GV
Sbjct: 394 RWDD-IEANRHNRVSPWEIELSGSLSGSGSLTVPGSKRTRIGLPGTRPDFSV-PNGMGVS 451
Query: 442 DFEESVRSSKVLQGQENVGFVSPLYGCDTVNHPLGFEMRAPAHQSLALNGIRKDNINELV 501
DF ES R KVLQGQE GF +P G DT +H E+R S + + + +
Sbjct: 452 DFGESSRFQKVLQGQEIFGFNTPYDGVDTQDHHPS-EIRCFPGSSCSRIAAIGNGVRNPL 510
Query: 502 RALPTSY--TGFVESNRFPKVLQGQEICPL----RSLTGKVDLNLGTWGKPNFGCNSMNM 555
SY GF ES RF KVLQGQE P R+L+ G++G + +
Sbjct: 511 GNSDISYKGIGFGESFRFHKVLQGQETFPSPPCGRALSANQAHENGSFGIFD------GV 564
Query: 556 YQASKPNIYPPPSESLSNMFFPYGDMPKTVQHHTMPPYASNLQRENVKLNSSSIQMPAIG 615
+ N +P +L + + + T P + ++R N SS +P +
Sbjct: 565 QVPTSRNGWP----ALVQGYNAHTHL-STPSVQVSSPSSVLMRRSKXLSNRSSFDIPEVY 619
Query: 616 AE----------IRKA--------NLLNEHKPVENIPTPTFKANMRSHKDGSFNGTAAGC 657
E +R LLNEH + +P P + + C
Sbjct: 620 GEKLTPSRCELSVRGGGQGGMNFFGLLNEHNQLA-VPHPLVTQSAFRGSQDLVPTCKSSC 678
Query: 658 KLFGFSLTSE----------TPTPSSQSPGK-------------------RSCTK----- 683
+LFGFSLT E TP SS PG +CTK
Sbjct: 679 RLFGFSLTEERSIGNKVDNPTPVTSSLIPGTSFLPQQLHSEPPVMTKAIGSNCTKRTAVV 738
Query: 684 -----VHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLL 720
HK GS+V +AI+ W+L+ ++DL+ L+HLF+MEG L
Sbjct: 739 RSKLQFHKLGSVVDQAINRWKLDRHDDLICALKHLFDMEGGL 780
>gi|359483904|ref|XP_002273401.2| PREDICTED: auxin response factor 3-like [Vitis vinifera]
Length = 740
Score = 510 bits (1314), Expect = e-141, Method: Compositional matrix adjust.
Identities = 315/692 (45%), Positives = 399/692 (57%), Gaps = 62/692 (8%)
Query: 52 SLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIF 111
S +SS+ ELWHACAGPL SLPKKG++VVYFPQGHLEQ+ S +P + +DL P +F
Sbjct: 41 SAASSVCLELWHACAGPLISLPKKGSLVVYFPQGHLEQL---SDYPAVA---YDLPPHVF 94
Query: 112 CKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHM 171
C+VVDV+L A DEVY QV+L+P+ + L+ ++E G +EE S TPHM
Sbjct: 95 CRVVDVKLHAEVVTDEVYAQVSLVPETKQIKQKLQEGEIEADGGEEEDIEGSIKSMTPHM 154
Query: 172 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQ 231
FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHG EWRFRHIYRGQ
Sbjct: 155 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGFEWRFRHIYRGQ 214
Query: 232 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSY 291
PRRHLLTTGWS FV++K LVSGDAVLFLRG DGELRLGIRR+ Q + P L Q
Sbjct: 215 PRRHLLTTGWSAFVNKKKLVSGDAVLFLRGGDGELRLGIRRAAQIKGSSPFPALCSQQLN 274
Query: 292 PNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDS 351
N L+ V NA+ST+S+F++ Y+PRA+ ++F+IP +K+ K I + G RFKMR E +D+
Sbjct: 275 LNTLTAVVNAISTRSVFNICYNPRASSSEFIIPLRKFSKSIDHSFSAGMRFKMRVETEDA 334
Query: 352 PERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSI 411
ERR G++TGI+D+DP RWP SKWRCL+VRWD+ I ++ +VSPWEI+ S SL
Sbjct: 335 AERRYTGLITGISDMDPVRWPGSKWRCLLVRWDD-IEANRHNRVSPWEIELSGSLSGSGS 393
Query: 412 QSSPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTV 471
+ P K+ R GL PD+ V G GV DF ES R KVLQGQE GF +P G DT
Sbjct: 394 LTVPGSKRTRIGLPGTRPDFSV-PNGMGVSDFGESSRFQKVLQGQEIFGFNTPYDGVDTQ 452
Query: 472 NHPLGFEMRA-PAHQSLALNGIRKDNINELVRA-LPTSYTGFVESNRFPKVLQGQEICPL 529
+H E+R P + I N L + + GF ES RF KVLQGQE P
Sbjct: 453 DHHPS-EIRCFPGSSCSGIAAIGNGVRNPLGNSDISYKGIGFGESFRFHKVLQGQETFPS 511
Query: 530 ----RSLTGKVDLNLGTWG------KPNFGCNSMNMYQASKPNIY-----PPPSESLSNM 574
R+L+ G++G P + Q + + S S +
Sbjct: 512 PPCGRALSANQAHENGSFGIFDGVQVPTSRNGWPALVQGYNAHTHLSTPSVQVSSPSSVL 571
Query: 575 FFPYGDM--PKTVQHHTMPPYASNLQRENVKLNSSSIQMPAIGAE----------IRKA- 621
F P H+ A+N ++E N SS +P + E +R
Sbjct: 572 MFQQASTAAPNIYSMHS----ANNQEKEQEISNRSSFDIPEVYGEKLTPSRCELSVRGGG 627
Query: 622 -------NLLNEHKPVENIPTPTFKANMRSHKDGSFNGTAAGCKLFGFSLTSE------- 667
LLNEH + +P P + + C+LFGFSLT E
Sbjct: 628 QGGMNFFGLLNEHNQLA-VPHPLVTQSAFRGSQDLVPTCKSSCRLFGFSLTEERSIGNKV 686
Query: 668 ---TPTPSSQSPGKRSC-TKVHKQGSLVGRAI 695
TP SS PG ++H + ++ +AI
Sbjct: 687 DNPTPVTSSLIPGTSFLPQQLHSEPPVMTKAI 718
>gi|297740441|emb|CBI30623.3| unnamed protein product [Vitis vinifera]
Length = 701
Score = 506 bits (1304), Expect = e-140, Method: Compositional matrix adjust.
Identities = 270/479 (56%), Positives = 330/479 (68%), Gaps = 12/479 (2%)
Query: 52 SLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIF 111
S +SS+ ELWHACAGPL SLPKKG++VVYFPQGHLEQ+ S +P + +DL P +F
Sbjct: 38 SAASSVCLELWHACAGPLISLPKKGSLVVYFPQGHLEQL---SDYPAVA---YDLPPHVF 91
Query: 112 CKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHM 171
C+VVDV+L A DEVY QV+L+P+ +++ L+ ++E G +EE S TPHM
Sbjct: 92 CRVVDVKLHAEVVTDEVYAQVSLVPETKIK-QKLQEGEIEADGGEEEDIEGSIKSMTPHM 150
Query: 172 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQ 231
FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHG EWRFRHIYRGQ
Sbjct: 151 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGFEWRFRHIYRGQ 210
Query: 232 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSY 291
PRRHLLTTGWS FV++K LVSGDAVLFLRG DGELRLGIRR+ Q + P L Q
Sbjct: 211 PRRHLLTTGWSAFVNKKKLVSGDAVLFLRGGDGELRLGIRRAAQIKGSSPFPALCSQQLN 270
Query: 292 PNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDS 351
N L+ V NA+ST+S+F++ Y+PRA+ ++F+IP +K+ K I + G RFKMR E +D+
Sbjct: 271 LNTLTAVVNAISTRSVFNICYNPRASSSEFIIPLRKFSKSIDHSFSAGMRFKMRVETEDA 330
Query: 352 PERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSI 411
ERR G++TGI+D+DP RWP SKWRCL+VRWD+ I ++ +VSPWEI+ S SL
Sbjct: 331 AERRYTGLITGISDMDPVRWPGSKWRCLLVRWDD-IEANRHNRVSPWEIELSGSLSGSGS 389
Query: 412 QSSPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTV 471
+ P K+ R GL PD+ V G GV DF ES R KVLQGQE GF +P G DT
Sbjct: 390 LTVPGSKRTRIGLPGTRPDFSV-PNGMGVSDFGESSRFQKVLQGQEIFGFNTPYDGVDTQ 448
Query: 472 NHPLGFEMRA-PAHQSLALNGIRKDNINELVRA-LPTSYTGFVESNRFPKVLQGQEICP 528
+H E+R P + I N L + + GF ES RF KVLQGQE P
Sbjct: 449 DHHPS-EIRCFPGSSCSGIAAIGNGVRNPLGNSDISYKGIGFGESFRFHKVLQGQETFP 506
>gi|291196867|emb|CAX63115.1| ARF4 protein [Cabomba aquatica]
Length = 605
Score = 499 bits (1284), Expect = e-138, Method: Compositional matrix adjust.
Identities = 288/585 (49%), Positives = 365/585 (62%), Gaps = 48/585 (8%)
Query: 109 QIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKST 168
QIFC+V+DV+L A++END+VY QV LLP ELE + K LE+ DEE G K+
Sbjct: 1 QIFCRVLDVKLHADQENDDVYAQVTLLP--ELESNEVCGKNLEE---DEESGSEILCKTI 55
Query: 169 PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIY 228
PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDY QQRPSQELVAKDLHG EW+FRHIY
Sbjct: 56 PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKFRHIY 115
Query: 229 RGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQ 288
RGQPRRHLLTTGWS+FV+QK LVSGDAVLFLRG+DGELRLGIRR+ +P + +P S+LS Q
Sbjct: 116 RGQPRRHLLTTGWSVFVNQKGLVSGDAVLFLRGEDGELRLGIRRASRPPSSIPYSVLSSQ 175
Query: 289 NSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEM 348
+ ++LS ANA+STKSMFHVFYSPRA+ ++FVIPY KYVK + PI IG RFKMR EM
Sbjct: 176 GLHLSILSPAANALSTKSMFHVFYSPRASPSEFVIPYWKYVKSLSRPISIGMRFKMRLEM 235
Query: 349 DDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPP 408
+DS E+RC G +TG D+DP RWPNSKWRCLMVRWD+ QE+VSPWEI+ S+SLP
Sbjct: 236 EDSAEKRCTGAITGACDVDPLRWPNSKWRCLMVRWDDSSLVGRQERVSPWEIEPSLSLPA 295
Query: 409 LSIQSSPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGC 468
LS +PR+K+L+T L + + G L+F E+VRS KVLQGQENV F L
Sbjct: 296 LSCPVAPRIKRLQTCLMS-------TLDGMNPLEFAETVRSHKVLQGQENVAFAPTLNRS 348
Query: 469 DTVNHPLGFEMRAPAHQSLALNGIRKDNINE-LVRALP---TSYTGFVESNRFPKVLQGQ 524
D ++ F++ P+ + L + + I + R++P + E KV QGQ
Sbjct: 349 DQSDNYSEFKIWNPSQKPLQPPMLDTNAIGYPVARSVPPGICTSRDLHEHELRHKVFQGQ 408
Query: 525 EICPLRSLTGKVDLNLGTWGKPNFGCNSMNMYQASKPNIYPPPSESLS-----------N 573
E+ P LT K + G W N+ + +P+ P ++++ N
Sbjct: 409 EVFP---LTSKPLVESGRWVWKNYKQGLGELSANERPDCANFPGQNVTDTSVSSAFLQPN 465
Query: 574 MFFPYGDMPKTVQHHTMPPYASNLQRENVKLNSSSIQMPAIGAEIRKANL-----LNE-- 626
M+ YG H M E++ S+S+ P + + L E
Sbjct: 466 MWRIYGGS----SHGFMNKSYDVESSESMCFRSNSLTSPKSNQSVVYSGTEYLEPLEECH 521
Query: 627 ---HKPVENIPTPTFKANMRSHKDGSFNGTAAGCKLFGFSLTSET 668
K + + TPT + + +S K G+ GCKLFGF L ET
Sbjct: 522 QYGRKCLATVTTPTSR-DKQSDKGGN---ARKGCKLFGFPLNLET 562
>gi|302398565|gb|ADL36577.1| ARF domain class transcription factor [Malus x domestica]
Length = 712
Score = 498 bits (1281), Expect = e-138, Method: Compositional matrix adjust.
Identities = 305/677 (45%), Positives = 394/677 (58%), Gaps = 53/677 (7%)
Query: 54 SSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCK 113
S+S+ ELWHACAGPL SLPKKG VVVY PQGHLEQV S FP +DL P +FC+
Sbjct: 35 SASVCLELWHACAGPLISLPKKGTVVVYLPQGHLEQV---SDFP---TSAYDLPPHLFCR 88
Query: 114 VVDVQLLANKENDEVYTQVALLPQPE-LEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMF 172
VVDV+L A D+V+ QV+L+P+ E +E LE + D D E G+S +TPHMF
Sbjct: 89 VVDVKLHAESGTDDVFAQVSLVPESEEIEHRLLEGETDADGEEDVEAMGKS---TTPHMF 145
Query: 173 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQP 232
CKTLTASDTSTHGGFSVPRRAAEDCFPPLDY QQRPSQELVAKDLHG+EWRFRHIYRGQP
Sbjct: 146 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQQRPSQELVAKDLHGLEWRFRHIYRGQP 205
Query: 233 RRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLP-DSILSKQNSY 291
RRHLLTTGWS FV++K LVSGDAVLFLRG DGELRLGIRR+ Q ++ ++ S+Q +Y
Sbjct: 206 RRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQVKSSATCPTLCSQQLNY 265
Query: 292 PNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDS 351
V VV NAVSTK+ F+V+Y+PRA+ ++F+IP +K+++ + + G RFKMRFE +D+
Sbjct: 266 STVTDVV-NAVSTKNAFNVYYNPRASSSEFIIPSRKFLRSLDHCFSAGMRFKMRFETEDA 324
Query: 352 PERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSI 411
ERR G++TGI LDP RWP SKW+CL+VRWD+ S H +VSPWEI+ S S+
Sbjct: 325 AERRYTGLITGIGALDPIRWPGSKWKCLVVRWDDIDTSKHG-RVSPWEIEPSGSVSSSHS 383
Query: 412 QSSPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTV 471
+K+ R GL A P++PV G G DF ES+R KVLQGQE GF +P G
Sbjct: 384 LMGTGLKRSRIGLSATKPEFPV-PNGNGASDFGESLRFQKVLQGQEISGFDTPFSGLGVQ 442
Query: 472 N-HPLG----FEMRAPAHQSLALNGIRKDNINELVRALPTSYTGFVESNRFPKVLQGQEI 526
N HP F+ + + NG+R+ ++ + + GF ES RF KVLQGQEI
Sbjct: 443 NPHPSEARRVFQGSGGSGIAAGSNGLRQSLVDS---EIASKGIGFGESLRFHKVLQGQEI 499
Query: 527 CPL----RSLTGKVDLNLGTWG------KPNFGCNSMNMYQASKPNIYPPPS-----ESL 571
P R+ G G P F M Q++ ++P +
Sbjct: 500 FPSSPYGRAPASNKAHEYGGPGVYDGFQVPGFRNGWSTMMQSNNTQVHPSATSVQVSSPS 559
Query: 572 SNMFFPYGDMPKT-----------VQHHTMPPYASNLQRENVKLNSSSIQMPAIGAEIRK 620
S + F P T +H + P + + + SSS E
Sbjct: 560 SVLMFQQAINPVTEFNSVYNGHNQEEHRVIHPTPYVSEYDGGRKTSSSFGERNFSREDHG 619
Query: 621 ANLLNEHKPVENIPTPTFKANMRSHKDGSFNGTAAGCKLFGFSLTSETPTPSSQSPGKRS 680
+ N P + S S + T C+LFGFSL+ + P Q+P +
Sbjct: 620 GTHSYNQHGISN--DPVISRSTFSGSQDSISPTKGSCRLFGFSLSEDKCVP-DQAP--TA 674
Query: 681 CTKVHKQGSLVGRAIDL 697
+ H + L+ A+ +
Sbjct: 675 GVRFHSKPPLMTSAVGI 691
>gi|255562988|ref|XP_002522498.1| Auxin response factor, putative [Ricinus communis]
gi|223538189|gb|EEF39798.1| Auxin response factor, putative [Ricinus communis]
Length = 730
Score = 496 bits (1277), Expect = e-137, Method: Compositional matrix adjust.
Identities = 267/487 (54%), Positives = 330/487 (67%), Gaps = 22/487 (4%)
Query: 49 SSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQP 108
SS+ +S S+ ELWHACAGPL SLPKKG+VVVYFPQGHLEQ+ P + + +DL
Sbjct: 42 SSAPVSGSVCLELWHACAGPLISLPKKGSVVVYFPQGHLEQL------PDLPLAVYDLPS 95
Query: 109 QIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKST 168
IFC+VVDV+L A NDEVY QV+L+P E L+ +LE G EE + KST
Sbjct: 96 YIFCRVVDVKLHAETANDEVYAQVSLVPDSEQIEQKLKQGKLE--GHCEEEDVEAVVKST 153
Query: 169 P-HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHI 227
HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDY QQRPSQELVAKDLHG EW+FRHI
Sbjct: 154 TTHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGFEWKFRHI 213
Query: 228 YRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSK 287
YRGQPRRHLLTTGWS FV++K LVSGDAVLFLRG DGELRLGIRR+ Q + G L
Sbjct: 214 YRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQVKCGASFPALCS 273
Query: 288 QNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFE 347
Q + L+ V +A+S +S+F++ Y+PRA+ ++F+IP K++K + +G RFKMRFE
Sbjct: 274 QQLNQSTLTDVVHAMSMRSLFNICYNPRASSSEFIIPLHKFLKSLDYSFSVGMRFKMRFE 333
Query: 348 MDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
+D+ ERR G++TGI+DLDP RWP SKWRCL+VRWD+ + ++ +VSPWEI+ S S+
Sbjct: 334 TEDAAERRYMGLITGISDLDPARWPGSKWRCLVVRWDD-METNRHSRVSPWEIEPSGSVS 392
Query: 408 PLSIQSSPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYG 467
+ +P +K+ R+G + P++PV G G DF E R KVLQGQE + F + G
Sbjct: 393 SCNSFMTPGLKRSRSGFPSSKPEFPV-PDGIGASDFGEPSRFQKVLQGQEILNFNTLYDG 451
Query: 468 CDTVNHPLGFEMRAPAHQSLAL----NGIRKDNINELVRALPTSY--TGFVESNRFPKVL 521
D HP P +S + NG R +N V SY GF ES RF KVL
Sbjct: 452 VDQNRHPSDIRRCFPGSRSSMIATTRNGARDPVVNSDV-----SYKSIGFSESLRFHKVL 506
Query: 522 QGQEICP 528
QGQEI P
Sbjct: 507 QGQEIIP 513
>gi|302820796|ref|XP_002992064.1| hypothetical protein SELMODRAFT_430287 [Selaginella moellendorffii]
gi|300140186|gb|EFJ06913.1| hypothetical protein SELMODRAFT_430287 [Selaginella moellendorffii]
Length = 781
Score = 486 bits (1251), Expect = e-134, Method: Compositional matrix adjust.
Identities = 299/722 (41%), Positives = 414/722 (57%), Gaps = 56/722 (7%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSA--FPPIEVPNFDLQPQIFCKVVDV 117
E WHACAGPL LP G+ VVYFPQGH+EQV +S+ +++P ++L QIFC+V+++
Sbjct: 75 EAWHACAGPLVCLPLVGDRVVYFPQGHIEQVLASTNQNAADLQIPQYNLPSQIFCRVLNL 134
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQL-EDLGVDEEGGGRSPTKSTPHMFCKTL 176
L A +E DEVY Q+ L+P+ EL + + +QL + L +DE +K+ MFCK L
Sbjct: 135 SLGAYRETDEVYAQMTLVPENELFYIRISDQQLDQSLELDEPTAS---SKAKLSMFCKNL 191
Query: 177 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHL 236
T+SDTSTHGGFSVPRRAAE+CFP LDY+Q P+QE++AKDLHG+EW+FRHIYRGQPRRHL
Sbjct: 192 TSSDTSTHGGFSVPRRAAEECFPRLDYQQTPPAQEIIAKDLHGIEWKFRHIYRGQPRRHL 251
Query: 237 LTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYP-NVL 295
LTTGWS+FVSQK LV+GD VLF+RG +GELR+GIRR+V+ ++ + S L +S VL
Sbjct: 252 LTTGWSVFVSQKKLVAGDTVLFVRGDNGELRIGIRRAVRTQSSVTSSSLLSSHSMQIGVL 311
Query: 296 SVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERR 355
+ A+AVSTK+MF VFY+PRA+ A+FV+PY KYVK I IG RFKMRFE +DS ERR
Sbjct: 312 AAAAHAVSTKTMFTVFYNPRASPAEFVVPYHKYVKSFKMNILIGMRFKMRFETEDSSERR 371
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS---LPPLSIQ 412
G +TGI D+DP RWP SKWR L V WDE S+ QE+VSPWEI+ ++ PP+S
Sbjct: 372 YMGTITGIGDIDPARWPGSKWRFLKVGWDEHAASERQERVSPWEIEPFIAPNVTPPVST- 430
Query: 413 SSPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVN 472
K+ R + D VS + ++ +R ++LQ N+ S Y D
Sbjct: 431 -----KRFRPTMLT---DISVSRKS-----YDNHLR--QILQANRNLQ-TSHKYEADERE 474
Query: 473 HPLGFEMRAP----AHQSLALNGIRKDNINELVRALPTSYTGFVESNRFPKVLQGQ-EIC 527
+ F +++P + + ++ LP+ + S+R + Q Q +C
Sbjct: 475 N---FLLKSPTALYSEAKVTSRVTEGHSVPGFPSGLPSPGNEGLPSHRKVDMHQQQLRLC 531
Query: 528 PLRSLTGKVDLNLGTWGKPNFGCNSMNMYQASKPNIYPPPSESLSNMFFPYGDMPKTVQH 587
+ KV L +P+ + + A +Y P + N F P
Sbjct: 532 VQQFREQKVPLQFEKPQQPSPTSSFASRQAALSCPVYLQPQHTTDNSFLKLLMSPTLSSL 591
Query: 588 HTMPPYASNLQRENVKLNSSSIQMPAIGAEIRKANLLNEHKPVENIPTPTFKANMRSHKD 647
P L R N N S + G ++ L T K ++ HKD
Sbjct: 592 QQAPRVEEPLARGNA--NDSDRECKLFGFSLKPKTAL----------ASTVKDDV--HKD 637
Query: 648 GSFNGTAAGCKLFGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLL 707
A+G + F+ + Q P R+CTKVHK G+ VGRA+DL + GY LL
Sbjct: 638 --LESEASGFRK-CFTGQNWNQQQQQQQPS-RTCTKVHKHGA-VGRALDLSKFRGYTQLL 692
Query: 708 SELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
EL+HLF ++ L W+ +Y D+E D+++VGDDPW EFC V I I + E++K+
Sbjct: 693 EELQHLFGIDESLN--GSEWQTVYVDNEGDMLLVGDDPWEEFCTTVRCIRILSPAEIQKL 750
Query: 768 TI 769
T+
Sbjct: 751 TV 752
>gi|115441981|ref|NP_001045270.1| Os01g0927600 [Oryza sativa Japonica Group]
gi|75222728|sp|Q5JK20.1|ARFD_ORYSJ RecName: Full=Auxin response factor 4; AltName: Full=OsARF2
gi|57900138|dbj|BAD88200.1| putative auxin response factor [Oryza sativa Japonica Group]
gi|113534801|dbj|BAF07184.1| Os01g0927600 [Oryza sativa Japonica Group]
Length = 808
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 298/786 (37%), Positives = 435/786 (55%), Gaps = 89/786 (11%)
Query: 51 SSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQ 109
SS +Y ELWHACAGPL ++P+ G++V YFPQGH+EQV AS + ++ +DL +
Sbjct: 15 SSTGDPLYDELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADSQMRLYDLPSK 74
Query: 110 IFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTP 169
+ C+V++V+L A ++ DEVY QV L+P+PE + +E V R P +S
Sbjct: 75 LLCRVLNVELKAEQDTDEVYAQVMLMPEPEQNEMAVEKTTPTSGPVQ----ARPPVRS-- 128
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
FCKTLTASDTSTHGGFSV RR A++C PPLD Q P+QELVAKDLH ++WRFRHI+R
Sbjct: 129 --FCKTLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHSMDWRFRHIFR 186
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQN 289
GQPRRHLL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++ + +P S++S Q+
Sbjct: 187 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQS 246
Query: 290 SYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMD 349
+ VL+ +A++TKSMF V+Y PR + ++F+IPY +Y++ + N +G RF+MRFE +
Sbjct: 247 MHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSVGMRFRMRFEGE 306
Query: 350 DSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPL 409
++PE+R G + G +LDP WP S WR L VRWDE ++VSPW+I+ + S PP+
Sbjct: 307 EAPEQRFTGTIIGSENLDPV-WPESSWRSLKVRWDEPSTIPRPDRVSPWKIEPASS-PPV 364
Query: 410 SIQSSPRMKKLRTGLQAPPPDYPVSARGGGV---LDFEESVRS--SKVLQGQENVGFVSP 464
+ R+K+ R P+ P+ + D ++ RS S VLQGQE + S
Sbjct: 365 NPLPLSRVKRPRPNAPPASPESPILTKEAATKVDTDPAQAQRSQNSTVLQGQEQMTLRSN 424
Query: 465 LYGCDTVN------------------HPLGFEMRAPAHQSLALNGIRKDNINELVRALPT 506
L + + HPL F+ R P + L G R+ + + VR+
Sbjct: 425 LTESNDSDVTAHKPMMWSPSPNAAKAHPLTFQQRPPMDNWMQL-GRRETDFKD-VRSGSQ 482
Query: 507 SY---TGFVESN---------RFPKVLQGQ-----------EICPLRSLTGKVDLNLGTW 543
S+ GF N F Q Q + P SLT + + T
Sbjct: 483 SFGDSPGFFMQNFDEAPNRLTSFKNQFQDQGSARHFSDPYYYVSPQPSLTVESSTQMHTD 542
Query: 544 GKP-NFGCNSMNMYQASKPN----IYPPPSESLSNMFFPYGDMPKTVQ-HHTMPP----- 592
K +F +Y S+ + S S N F + P+ ++ H ++ P
Sbjct: 543 SKELHFWNGQSTVYGNSRDRPQNFRFEQNSSSWLNQSFARPEQPRVIRPHASIAPVELEK 602
Query: 593 --------YASNLQRENVKLNSSSIQMPAIGAE-IRKANLLNEHKPVENIPTPTFKANMR 643
+ + N N S M A ++ + LN+ +PV+ P
Sbjct: 603 TEGSGFKIFGFKVDTTNAPNNHLSSPMAATHEPMLQTPSSLNQLQPVQTDCIPEVSV--- 659
Query: 644 SHKDGSFNGTAAGCKLFG--FSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLN 701
S GTA + G +S+ +Q RSCTKVHKQG +GR++DL + +
Sbjct: 660 -----STAGTATENEKSGQQAQQSSKDVQSKTQVASTRSCTKVHKQGVALGRSVDLSKFS 714
Query: 702 GYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQ 761
Y++L +EL+ +F +G L K W+I+YTD+E D+M+VGDDPW EFC+ V KI+IYT+
Sbjct: 715 NYDELKAELDKMFEFDGELVSSNKNWQIVYTDNEGDMMLVGDDPWEEFCSIVRKIYIYTK 774
Query: 762 EEVEKM 767
EEV+KM
Sbjct: 775 EEVQKM 780
>gi|218189656|gb|EEC72083.1| hypothetical protein OsI_05027 [Oryza sativa Indica Group]
Length = 803
Score = 483 bits (1244), Expect = e-133, Method: Compositional matrix adjust.
Identities = 298/786 (37%), Positives = 435/786 (55%), Gaps = 89/786 (11%)
Query: 51 SSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQ 109
SS +Y ELWHACAGPL ++P+ G++V YFPQGH+EQV AS + ++ +DL +
Sbjct: 10 SSTGDPLYDELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADSQMRLYDLPSK 69
Query: 110 IFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTP 169
+ C+V++V+L A ++ DEVY QV L+P+PE + +E V R P +S
Sbjct: 70 LLCRVLNVELKAEQDTDEVYAQVMLMPEPEQNEMAVEKTTPTSGPVQ----ARPPVRS-- 123
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
FCKTLTASDTSTHGGFSV RR A++C PPLD Q P+QELVAKDLH ++WRFRHI+R
Sbjct: 124 --FCKTLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHSMDWRFRHIFR 181
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQN 289
GQPRRHLL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++ + +P S++S Q+
Sbjct: 182 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQS 241
Query: 290 SYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMD 349
+ VL+ +A++TKSMF V+Y PR + ++F+IPY +Y++ + N +G RF+MRFE +
Sbjct: 242 MHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSVGMRFRMRFEGE 301
Query: 350 DSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPL 409
++PE+R G + G +LDP WP S WR L VRWDE ++VSPW+I+ + S PP+
Sbjct: 302 EAPEQRFTGTIIGSENLDPV-WPESSWRSLKVRWDEPSTIPRPDRVSPWKIEPASS-PPV 359
Query: 410 SIQSSPRMKKLRTGLQAPPPDYPVSARGGGV---LDFEESVRS--SKVLQGQENVGFVSP 464
+ R+K+ R P+ P+ + D ++ RS S VLQGQE + S
Sbjct: 360 NPLPLSRVKRPRPNAPPASPESPILTKEAATKVDTDPAQAQRSQNSTVLQGQEQMTLRSN 419
Query: 465 LYGCDTVN------------------HPLGFEMRAPAHQSLALNGIRKDNINELVRALPT 506
L + + HPL F+ R P + L G R+ + + VR+
Sbjct: 420 LTESNDSDVTAHKPMMWSPSPNAAKAHPLTFQQRPPMDNWMQL-GRRETDFKD-VRSGSQ 477
Query: 507 SY---TGFVESN---------RFPKVLQGQ-----------EICPLRSLTGKVDLNLGTW 543
S+ GF N F Q Q + P SLT + + T
Sbjct: 478 SFGDSPGFFMQNFDEAPNRLTSFKNQFQDQGSARHFSDPYYYVSPQPSLTVESSTQMHTD 537
Query: 544 GKP-NFGCNSMNMYQASKPN----IYPPPSESLSNMFFPYGDMPKTVQ-HHTMPP----- 592
K +F +Y S+ + S S N F + P+ ++ H ++ P
Sbjct: 538 SKELHFWNGQSTVYGNSRDRPQNFRFEQNSSSWLNQSFARPEQPRVIRPHASIAPVELEK 597
Query: 593 --------YASNLQRENVKLNSSSIQMPAIGAE-IRKANLLNEHKPVENIPTPTFKANMR 643
+ + N N S M A ++ + LN+ +PV+ P
Sbjct: 598 TEGSGFKIFGFKVDTTNAPNNHLSSPMAATHEPMLQTPSSLNQLQPVQTDCIPEVSV--- 654
Query: 644 SHKDGSFNGTAAGCKLFG--FSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLN 701
S GTA + G +S+ +Q RSCTKVHKQG +GR++DL + +
Sbjct: 655 -----STAGTATENEKSGQQAQQSSKDVQSKTQVASTRSCTKVHKQGVALGRSVDLSKFS 709
Query: 702 GYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQ 761
Y++L +EL+ +F +G L K W+I+YTD+E D+M+VGDDPW EFC+ V KI+IYT+
Sbjct: 710 NYDELKAELDKMFEFDGELVSSNKNWQIVYTDNEGDMMLVGDDPWEEFCSIVRKIYIYTK 769
Query: 762 EEVEKM 767
EEV+KM
Sbjct: 770 EEVQKM 775
>gi|19352039|dbj|BAB85913.1| auxin response factor 2 [Oryza sativa]
Length = 791
Score = 482 bits (1240), Expect = e-133, Method: Compositional matrix adjust.
Identities = 296/780 (37%), Positives = 432/780 (55%), Gaps = 89/780 (11%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKVV 115
+Y ELWHACAGPL ++P+ G++V YFPQGH+EQV AS + ++ +DL ++ C+V+
Sbjct: 4 LYDELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADSQMRLYDLPSKLLCRVL 63
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKT 175
+V+L A ++ DEVY QV L+P+PE + +E V R P +S FCKT
Sbjct: 64 NVELKAEQDTDEVYAQVMLMPEPEQNEMAVEKTTPTSGPVQ----ARPPVRS----FCKT 115
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
LTASDTSTHGGFSV RR A++C PPLD Q P+QELVAKDLH ++WRFRHI+RGQPRRH
Sbjct: 116 LTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHSMDWRFRHIFRGQPRRH 175
Query: 236 LLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVL 295
LL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++ + +P S++S Q+ + VL
Sbjct: 176 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVL 235
Query: 296 SVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERR 355
+ +A++TKSMF V+Y PR + ++F+IPY +Y++ + N +G RF+MRFE +++PE+R
Sbjct: 236 ATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSVGMRFRMRFEGEEAPEQR 295
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSP 415
G + G +LDP WP S WR L VRWDE ++VSPW+I+ S PP++
Sbjct: 296 FTGTIIGSENLDPV-WPESSWRSLKVRWDEPSTIPRPDRVSPWKIE-PASSPPVNPLPLS 353
Query: 416 RMKKLRTGLQAPPPDYPVSARGGGV---LDFEESVRS--SKVLQGQENVGFVSPLYGCDT 470
R+K+ R P+ P+ + D ++ RS S VLQGQE + S L +
Sbjct: 354 RVKRPRPNAPPASPESPILTKEAATKVDTDPAQAQRSQNSTVLQGQEQMTLRSNLTESND 413
Query: 471 VN------------------HPLGFEMRAPAHQSLALNGIRKDNINELVRALPTSY---T 509
+ HPL F+ R P + L G R+ + + VR+ S+
Sbjct: 414 SDVTAHKPMMWSPSPNAAKAHPLTFQQRPPMDNWMQL-GRRETDFKD-VRSGSQSFGDSP 471
Query: 510 GFVESN---------RFPKVLQGQ-----------EICPLRSLTGKVDLNLGTWGKP-NF 548
GF N F Q Q + P SLT + + T K +F
Sbjct: 472 GFFMQNFDEAPNRLTSFKNQFQDQGSARHFSDPYYYVSPQPSLTVESSTQMHTDSKELHF 531
Query: 549 GCNSMNMYQASKPN----IYPPPSESLSNMFFPYGDMPKTVQ-HHTMPP----------- 592
+Y S+ + S S N F + P+ ++ H ++ P
Sbjct: 532 WNGQSTVYGNSRDRPQNFRFEQNSSSWLNQSFARPEQPRVIRPHASIAPVELEKTEGSGF 591
Query: 593 --YASNLQRENVKLNSSSIQMPAIGAE-IRKANLLNEHKPVENIPTPTFKANMRSHKDGS 649
+ + N N S M A ++ + LN+ +PV+ P S
Sbjct: 592 KIFGFKVDTTNAPNNHLSSPMAATHEPMLQTPSSLNQLQPVQTDCIPEVSV--------S 643
Query: 650 FNGTAAGCKLFG--FSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLL 707
GTA + G +S+ +Q RSCTKVHKQG +GR++DL + + Y++L
Sbjct: 644 TAGTATENEKSGQQAQQSSKDVQSKTQVASTRSCTKVHKQGVALGRSVDLSKFSNYDELK 703
Query: 708 SELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
+EL+ +F +G L K W+I+YTD+E D+M+VGDDPW EFC+ V KI+IYT+EEV+KM
Sbjct: 704 AELDKMFEFDGELVSSNKNWQIVYTDNEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKM 763
>gi|414878885|tpg|DAA56016.1| TPA: hypothetical protein ZEAMMB73_705793 [Zea mays]
Length = 805
Score = 480 bits (1235), Expect = e-132, Method: Compositional matrix adjust.
Identities = 296/783 (37%), Positives = 430/783 (54%), Gaps = 97/783 (12%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKVV 115
+Y ELW ACAGPL ++P+ G++V YFPQGH+EQV AS + ++ +DL P++ C+V+
Sbjct: 21 LYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNQMRLYDLPPKLLCRVL 80
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKT 175
+V+L A + DEVY Q+ L+P+PE + E SP + FCKT
Sbjct: 81 NVELKAETDTDEVYAQIMLMPEPEQTDVPAEKP--------SSAPAASPRPAV-RSFCKT 131
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
LTASDTSTHGGFSV RR A++C PPLD Q P+QELVAKDLHG+EWRFRHI+RGQPRRH
Sbjct: 132 LTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQPRRH 191
Query: 236 LLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVL 295
LL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++ + +P S++S Q+ + VL
Sbjct: 192 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVL 251
Query: 296 SVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERR 355
+ +A++TKSMF V+Y PR + ++F+IPY +Y++ + N IG RF+MRFE +++PE+R
Sbjct: 252 ATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQR 311
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSP 415
G + G +LDP WP+S WR L VRWDE ++VSPW+I+ + S P + S
Sbjct: 312 FTGTIVGCENLDPL-WPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEPASSPPVNPLVHSS 370
Query: 416 RMKKLRTGLQAPPPDYPVSARGGGV---LDFEESVRSSKVLQGQENVGFVSPLYGC---- 468
R K+ R + P + V + G +D ++ + VLQGQE + + L
Sbjct: 371 RAKRPRQNVPPPSLESSVLTKEGATKVEIDSAQTQHQNSVLQGQEQMTLRNNLTESADSD 430
Query: 469 DTVNHPL------------GFEMRAPAHQSLALNGIRKDNINELVRALPTSYTG------ 510
TV P+ F+ R PA + G R+++ + A + T
Sbjct: 431 STVQKPMMWSPSLNGKAHTHFQQR-PAMDNWMPLGRRENDFKDTRSAFKDARTASQSFGD 489
Query: 511 ----FVE----------------SNRF--PKVLQGQE---ICPLRSLTGKVDLNLGTWGK 545
FV+ ++RF P Q+ + T + +L WG
Sbjct: 490 TQGFFVQAYDDNHHRLSFKNQGSTHRFADPYFYMPQQSSVTVESSTRTQTANNDLCFWGD 549
Query: 546 PN--FGCNSMNMYQASKPNIYPPPSESLSNMFFPYGDMPKTVQ-HHTMPPYASNLQRENV 602
N +G N + Q N PS L N FP + P+ V+ H T+ P+ RE
Sbjct: 550 QNAMYG-NPSDQQQGF--NFGQNPSSWL-NQPFPQVEQPRVVRPHATVAPFDLEKTREGS 605
Query: 603 KLNSSSIQ--------------MPAIGAEI---RKANLLNEHKPVENIPTPTFKANMRSH 645
Q +PAI + R + +NE +PV+ +
Sbjct: 606 GFKIFGFQVDTTSPSPVQLSSPLPAIQEHVLQTRPSAPVNELQPVQ----------IECL 655
Query: 646 KDGSFNGTAAGCKLFGFSLTSETPTPS-SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYN 704
+GS + + + S S SQ RSCTKVHKQG +GR++DL + Y
Sbjct: 656 PEGSVSTAGTATENIQQAPQSSKDIQSKSQGASTRSCTKVHKQGVALGRSVDLSKFTDYG 715
Query: 705 DLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEV 764
+L +EL+ +F+ EG L ++ W+I+YTD E D+M+VGDDPW EFC+ V KI+IYT+EEV
Sbjct: 716 ELQAELDKMFDFEGELVSGSQNWQIVYTDDEGDMMLVGDDPWEEFCSIVRKIYIYTKEEV 775
Query: 765 EKM 767
+KM
Sbjct: 776 QKM 778
>gi|295844294|gb|ADG43144.1| auxin response factor 10 [Zea mays]
Length = 799
Score = 479 bits (1234), Expect = e-132, Method: Compositional matrix adjust.
Identities = 296/783 (37%), Positives = 430/783 (54%), Gaps = 97/783 (12%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKVV 115
+Y ELW ACAGPL ++P+ G++V YFPQGH+EQV AS + ++ +DL P++ C+V+
Sbjct: 15 LYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNQMRLYDLPPKLLCRVL 74
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKT 175
+V+L A + DEVY Q+ L+P+PE + E SP + FCKT
Sbjct: 75 NVELKAETDTDEVYAQIMLMPEPEQTDVPAEKP--------SSAPAASPRPAV-RSFCKT 125
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
LTASDTSTHGGFSV RR A++C PPLD Q P+QELVAKDLHG+EWRFRHI+RGQPRRH
Sbjct: 126 LTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQPRRH 185
Query: 236 LLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVL 295
LL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++ + +P S++S Q+ + VL
Sbjct: 186 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVL 245
Query: 296 SVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERR 355
+ +A++TKSMF V+Y PR + ++F+IPY +Y++ + N IG RF+MRFE +++PE+R
Sbjct: 246 ATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQR 305
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSP 415
G + G +LDP WP+S WR L VRWDE ++VSPW+I+ + S P + S
Sbjct: 306 FTGTIVGCENLDPL-WPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEPASSPPVNPLVHSS 364
Query: 416 RMKKLRTGLQAPPPDYPVSARGGGV---LDFEESVRSSKVLQGQENVGFVSPLYGC---- 468
R K+ R + P + V + G +D ++ + VLQGQE + + L
Sbjct: 365 RAKRPRQNVPPPSLESSVLTKEGATKVEIDSAQTQHQNSVLQGQEQMTLRNNLTESADSD 424
Query: 469 DTVNHPL------------GFEMRAPAHQSLALNGIRKDNINELVRALPTSYTG------ 510
TV P+ F+ R PA + G R+++ + A + T
Sbjct: 425 STVQKPMMWSPSLNGKAHTHFQQR-PAMDNWMPLGRRENDFKDTRSAFKDARTASQSFGD 483
Query: 511 ----FVE----------------SNRF--PKVLQGQE---ICPLRSLTGKVDLNLGTWGK 545
FV+ ++RF P Q+ + T + +L WG
Sbjct: 484 TQGFFVQAYDDNHHRLSFKNQGSTHRFADPYFYMPQQSSVTVESSTRTQTANNDLCFWGD 543
Query: 546 PN--FGCNSMNMYQASKPNIYPPPSESLSNMFFPYGDMPKTVQ-HHTMPPYASNLQRENV 602
N +G N + Q N PS L N FP + P+ V+ H T+ P+ RE
Sbjct: 544 QNAMYG-NPSDQQQGF--NFGQNPSSWL-NQPFPQVEQPRVVRPHATVAPFDLEKTREGS 599
Query: 603 KLNSSSIQ--------------MPAIGAEI---RKANLLNEHKPVENIPTPTFKANMRSH 645
Q +PAI + R + +NE +PV+ +
Sbjct: 600 GFKIFGFQVDTTSPSPVQLSSPLPAIQEHVLQTRPSAPVNELQPVQ----------IECL 649
Query: 646 KDGSFNGTAAGCKLFGFSLTSETPTPS-SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYN 704
+GS + + + S S SQ RSCTKVHKQG +GR++DL + Y
Sbjct: 650 PEGSVSTAGTATENIQQAPQSSKDIQSKSQGASTRSCTKVHKQGVALGRSVDLSKFTDYG 709
Query: 705 DLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEV 764
+L +EL+ +F+ EG L ++ W+I+YTD E D+M+VGDDPW EFC+ V KI+IYT+EEV
Sbjct: 710 ELQAELDKMFDFEGELVSGSQNWQIVYTDDEGDMMLVGDDPWEEFCSIVRKIYIYTKEEV 769
Query: 765 EKM 767
+KM
Sbjct: 770 QKM 772
>gi|356548656|ref|XP_003542716.1| PREDICTED: auxin response factor 3-like [Glycine max]
Length = 714
Score = 478 bits (1229), Expect = e-132, Method: Compositional matrix adjust.
Identities = 249/476 (52%), Positives = 314/476 (65%), Gaps = 11/476 (2%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVV 115
++ ELWHACAGP+ SLPKKG+VVVYFPQGHLEQ P + ++ +FC+V+
Sbjct: 29 TVCLELWHACAGPMISLPKKGSVVVYFPQGHLEQHLHDFPLPA----SANIPSHVFCRVL 84
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKT 175
DV+L A + +DEVY QV L+P+ E L + + G +EE +TPHMFCKT
Sbjct: 85 DVKLHAEEGSDEVYCQVVLVPESEQVQQKLREGEFDADG-EEEDAEAVMKSTTPHMFCKT 143
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
LTASDTSTHGGFSVPRRAAEDCFPPLDY QQRPSQELVAKDLHG EWRFRHIYRGQPRRH
Sbjct: 144 LTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGQEWRFRHIYRGQPRRH 203
Query: 236 LLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVL 295
LLTTGWS FV++K LVSGDAVLFLRG+DGELRLGIRR+ Q ++G S LS Q P L
Sbjct: 204 LLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGIRRAAQLKSGSTFSALSGQQGSPTSL 263
Query: 296 SVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERR 355
V NA+S + F + Y+PR + ++F+IP ++VK + G RF+MRFE +D+ ERR
Sbjct: 264 MDVVNALSARCAFSIHYNPRVSSSEFIIPIHRFVKSLDYSYSAGMRFRMRFETEDAAERR 323
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSP 415
G++ GI D+DP RWP S+WRCLMVRWD+ + H +VSPWEI+ S S + S
Sbjct: 324 FTGLIVGIADVDPVRWPGSRWRCLMVRWDDLEATRHN-RVSPWEIEPSGSASTANNLMSA 382
Query: 416 RMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHPL 475
+K+ + GL + D+PVS G DF ES+R KVLQGQE +G + + +H L
Sbjct: 383 GLKRTKIGLPSAKLDFPVS-NAIGTSDFGESLRFQKVLQGQEMLGVNTTYDSFNAQSHQL 441
Query: 476 GFEMR---APAHQSLALNGIRKDNINELVRALPTSYTGFVESNRFPKVLQGQEICP 528
R + +A G I+++ + + GF ES RF KVLQGQEI P
Sbjct: 442 SDLRRCYPGSNYPRIAATG-NSIGISQVSSNVSNNGIGFSESFRFQKVLQGQEILP 496
>gi|356521420|ref|XP_003529354.1| PREDICTED: auxin response factor 3-like [Glycine max]
Length = 709
Score = 476 bits (1225), Expect = e-131, Method: Compositional matrix adjust.
Identities = 256/485 (52%), Positives = 323/485 (66%), Gaps = 17/485 (3%)
Query: 50 SSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQ 109
SS SS++ ELWHACAGPL SLPKKG+VVVYFPQGHLEQ P + ++
Sbjct: 18 SSGSSSTVCLELWHACAGPLISLPKKGSVVVYFPQGHLEQHLHDFPLPA----SANIPSH 73
Query: 110 IFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTP 169
+FC+V+DV+L A + +DEV+ QV L+P+ E L + + G +EE +TP
Sbjct: 74 VFCRVLDVKLHAEEGSDEVHCQVVLVPETEQVHQKLREGEFDADG-EEEDAEAVMKSTTP 132
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDY QQRPSQELVAKDLHG EWRFRHIYR
Sbjct: 133 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGQEWRFRHIYR 192
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQN 289
GQPRRHLLTTGWS FV++K LVSGDAVLFLRG+DGELRLGIRR+ Q ++G S LS Q
Sbjct: 193 GQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGIRRAAQLKSGSTFSALSGQQ 252
Query: 290 SYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMD 349
P L V NA+S + F + Y+PR + ++F+IP +++K + G RF+MRFE +
Sbjct: 253 LSPTSLMDVVNALSARCAFSIHYNPRVSTSEFIIPIHRFLKSLDYSYSAGMRFRMRFETE 312
Query: 350 DSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPL 409
D+ ERR G++ GI D+DP RWP SKWRCLMVRWD+ + H +VSPWEI+ S S
Sbjct: 313 DAAERRFTGLIVGIADVDPVRWPGSKWRCLMVRWDDLEVTRHN-RVSPWEIEPSGSASTA 371
Query: 410 SIQSSPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCD 469
+ S +K+ + GL + ++PVS G DF ES+R KVLQGQE +G V+P Y D
Sbjct: 372 NNLMSAGLKRTKIGLPSAKLEFPVS-NAIGTSDFGESLRFQKVLQGQEMLG-VNPTY--D 427
Query: 470 TVN---HPLGFEMR---APAHQSLALNGIRKDNINELVRALPTSYTGFVESNRFPKVLQG 523
++N H + R + +A G I ++ + ++ GF ES RF KVLQG
Sbjct: 428 SINAQSHQVSDLRRCYPVSNYPRIAATG-NSIGIPQVSSNVSSNGIGFSESFRFQKVLQG 486
Query: 524 QEICP 528
QEI P
Sbjct: 487 QEIFP 491
>gi|356549269|ref|XP_003543018.1| PREDICTED: auxin response factor 3-like [Glycine max]
Length = 736
Score = 473 bits (1217), Expect = e-130, Method: Compositional matrix adjust.
Identities = 252/477 (52%), Positives = 320/477 (67%), Gaps = 15/477 (3%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVV 115
S+ ELWHACAGPL SLPKKG+VVVY PQGH E V FP V +D+ P +FC+V+
Sbjct: 49 SVCLELWHACAGPLISLPKKGSVVVYLPQGHFEHVQD---FP---VTAYDIPPHVFCRVL 102
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKT 175
DV+L A + +DEVY QV L+P+ E +L ++ G +EE +TPHMFCKT
Sbjct: 103 DVKLHAEEGSDEVYCQVLLVPESEQVEQSLREGEIVADG-EEEDTEAIVKSTTPHMFCKT 161
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
LTASDTSTHGGFSVPRRAAEDCFPPLDY QQRPSQELVAKDLHG+EWRFRHIYRGQPRRH
Sbjct: 162 LTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGLEWRFRHIYRGQPRRH 221
Query: 236 LLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVL 295
LLTTGWS FV++K LVSGDAVLFLRG DGELRLGIRR+ Q ++ ++ S Q P L
Sbjct: 222 LLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQLKSAGSFAVPSGQQLNPATL 281
Query: 296 SVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERR 355
V NA+ST+ F V Y+PR + ++F+IP K++K + +G RF+MRFE +D+ ERR
Sbjct: 282 KGVVNALSTRCAFSVCYNPRFSSSEFIIPVHKFLKSLDCSYSVGMRFRMRFETEDAAERR 341
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSP 415
C G++ GI+D+DP RW SKWRCL+VRWD+ I + + +VSPWEI+ S S S S
Sbjct: 342 CTGLIAGISDVDPVRWLGSKWRCLLVRWDD-IEAARRNRVSPWEIEPSGSASNSSNLMSA 400
Query: 416 RMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHPL 475
+K+ R G+ + ++P + G G DF ES+R KVLQGQE +G +P G + P
Sbjct: 401 GLKRTRIGMTSVKLEFP-TPDGIGASDFGESLRFRKVLQGQEILGVNTPFDGIN-AQSPR 458
Query: 476 GFEMRAPAHQSLALNGIRKDNINELVRALPTSYT----GFVESNRFPKVLQGQEICP 528
+E+ + +GI N + + ++ GF ES RF KVLQGQEI P
Sbjct: 459 LYEL-GRCYPGSNCSGIPPTGNNIRMPHPASDFSCNGIGFSESFRFQKVLQGQEILP 514
>gi|449433792|ref|XP_004134681.1| PREDICTED: auxin response factor 3-like [Cucumis sativus]
Length = 731
Score = 473 bits (1216), Expect = e-130, Method: Compositional matrix adjust.
Identities = 297/678 (43%), Positives = 383/678 (56%), Gaps = 71/678 (10%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVD 116
I ELWHACAGPLTSLPKKG++VVY PQGH EQ+ FPP +DL P I C+V+D
Sbjct: 43 ICLELWHACAGPLTSLPKKGSLVVYLPQGHFEQMQE---FPPTP---YDLPPHILCRVID 96
Query: 117 VQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPT--KSTPHMFCK 174
VQL A +DEVY QV+L P+ E +E K E++ D E +TPHMFCK
Sbjct: 97 VQLHAEAGSDEVYAQVSLFPENE----QMEHKMQEEMNNDSEEEDVEEGEKTTTPHMFCK 152
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLTASDTSTHGGFSVPRRAAEDCFPPLDY QQRPSQELVAKDL G++W+FRHIYRGQPRR
Sbjct: 153 TLTASDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELVAKDLLGLKWKFRHIYRGQPRR 212
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDS-ILSKQNSYPN 293
HLLTTGWS FV++K LVSGDAVLFLRG DGELRLGIRR+ Q ++G S I S+Q + +
Sbjct: 213 HLLTTGWSAFVNKKRLVSGDAVLFLRGNDGELRLGIRRAAQLKSGSAFSNICSQQLNSSS 272
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
++ VV NAVS+KS F V Y+PRA + FV+P+ K++K I + +G RF++ FE DD +
Sbjct: 273 IMDVV-NAVSSKSSFSVCYNPRAASSQFVLPFHKFLKSINHSFSVGLRFRLSFETDDGAD 331
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS 413
RR G +TG++D+DP RWP S+WR LMVRWD+ + H +VSPWEI+ S S+ +
Sbjct: 332 RRHTGHITGVSDVDPIRWPGSRWRSLMVRWDDGETNRHG-RVSPWEIEPSGSVSLSTNLV 390
Query: 414 SPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNH 473
P +K+ R GL + ++PV G G DF ES+R KVLQGQE +G+ +P G +
Sbjct: 391 PPGLKRTRIGLSSTKLEFPV-PNGIGASDFGESLRFQKVLQGQEILGYSTPPDGDNNNRC 449
Query: 474 PLGFEMRAPAHQSLALNGIRKDNINELVRALPTSYTGFV--ESNRFPKVLQGQEICPLRS 531
P P + +R N L+ + TS G V ES ++ KVLQGQEI P
Sbjct: 450 PPEKRRLIPGLHGSGIALMRNGPRNPLINS-ETSSRGIVFDESFQYHKVLQGQEIFPSPY 508
Query: 532 LTGKVDLNLGTWGKPNFGCNSMN------------------------------------- 554
V N K N GC+ +
Sbjct: 509 YGRAVATN---EVKANGGCSPADGIRLPRTKDGWPMAMQCENFLTRSSIPSVQVSSPSSV 565
Query: 555 -MYQASKPNIYPPPSESLSNMFFPYGDMPKTVQHHTMPPYASNLQRENVKLNSSSIQMPA 613
M+Q S + S + N F M K+ HH+ + ++ +N+ I
Sbjct: 566 FMFQQSMVPVQSFNSHNRGN-FAEQRIMNKSTSHHSGTTFMTDH-----SMNTEFIPQGM 619
Query: 614 IGAEIRKANLLNEHKPVENIPTPTFKANMRSHKDGSFNGTAAGCKLFGFSLTSETPTPSS 673
+ + N L P T T A KD S + AGC+LFGFSLT E +
Sbjct: 620 CPTSLGEQNQLGLSHP----STTTASAAFTVSKDLS-STCKAGCRLFGFSLTEEKNVGNK 674
Query: 674 QSPGKRSCTKVHKQGSLV 691
G + T ++ + V
Sbjct: 675 DDKGSSATTPINAGTTTV 692
>gi|302761368|ref|XP_002964106.1| hypothetical protein SELMODRAFT_166729 [Selaginella moellendorffii]
gi|300167835|gb|EFJ34439.1| hypothetical protein SELMODRAFT_166729 [Selaginella moellendorffii]
Length = 774
Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust.
Identities = 297/723 (41%), Positives = 409/723 (56%), Gaps = 65/723 (8%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSA--FPPIEVPNFDLQPQIFCKVVDV 117
E WHACAGPL LP G+ VVYFPQGH+EQV +S+ +++P ++L QIFC+V+++
Sbjct: 75 EAWHACAGPLVCLPLVGDRVVYFPQGHIEQVLASTNQNAADLQIPQYNLPSQIFCRVLNL 134
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
L A +E DEVY Q+ L+P+ E +LE +DE +K+ MF K LT
Sbjct: 135 SLGAYRETDEVYAQMTLVPENEQLDQSLE--------LDEPTAS---SKAKLSMFSKNLT 183
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
+SDTSTHGGFSVPRRAAE+CFP LDY+Q P+QE++AKDLHGVEW+FRHIYRGQPRRHLL
Sbjct: 184 SSDTSTHGGFSVPRRAAEECFPRLDYQQTPPAQEIIAKDLHGVEWKFRHIYRGQPRRHLL 243
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYP-NVLS 296
TTGWS+FVSQK LV+GD VLF+RG +GELR+GIRR+V+ ++ + S L +S VL+
Sbjct: 244 TTGWSVFVSQKKLVAGDTVLFVRGDNGELRIGIRRAVRTQSSVTSSSLLSSHSMQIGVLA 303
Query: 297 VVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER-- 354
A+AVSTK+MF VFY+PRA+ A+FV+PY KYVK I IG RFKMRFE +DS ER
Sbjct: 304 AAAHAVSTKTMFTVFYNPRASPAEFVVPYHKYVKSFKMNILIGMRFKMRFETEDSSERSV 363
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS---LPPLSI 411
R G +TGI D+DP RWP SKWR L V WDE S+ QE+VSPWEI+ ++ PP+S
Sbjct: 364 RYMGTITGIGDIDPARWPGSKWRFLKVGWDEHAASERQERVSPWEIEPFIAPNVTPPVST 423
Query: 412 QSSPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTV 471
K+ R + D VS + ++ +R ++LQ N+ S Y D
Sbjct: 424 ------KRFRPTMLT---DISVSRKS-----YDNHLR--QILQANRNLQ-TSHKYEADER 466
Query: 472 NHPLGFEMRAP----AHQSLALNGIRKDNINELVRALPTSYTGFVESNRFPKVLQGQ-EI 526
+ F +++P + + ++ LP+ + S+R + Q Q +
Sbjct: 467 EN---FLLKSPTALYSEAKVTSRVTEGHSVPGFPSGLPSPGNEGLPSHRKVDMHQQQLRL 523
Query: 527 CPLRSLTGKVDLNLGTWGKPNFGCNSMNMYQASKPNIYPPPSESLSNMFFPYGDMPKTVQ 586
C + KV L +P+ + + A +Y P + N F P
Sbjct: 524 CVQQFREQKVPLQFEKPQQPSPTSSFASRQAALSCPLYLQPQHTTDNSFLKLLMSPTLAS 583
Query: 587 HHTMPPYASNLQRENVKLNSSSIQMPAIGAEIRKANLLNEHKPVENIPTPTFKANMRSHK 646
P L R N N S + G ++ L T K ++ HK
Sbjct: 584 LQQAPRVEEPLARGNA--NDSDRECKLFGFSLKPKTAL----------ASTVKDDV--HK 629
Query: 647 DGSFNGTAAGCKLFGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDL 706
D A+G + F+ + Q P R+CTKVHK G+ VGRA+DL + GY L
Sbjct: 630 D--LESEASGFRKC-FTGQNWNQQQQQQQPS-RTCTKVHKHGA-VGRALDLSKFRGYTQL 684
Query: 707 LSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEK 766
L EL+HLF ++ L W+ +Y D+E D+++VGDDPW EFC+ V I I + E++K
Sbjct: 685 LEELQHLFGIDESLN--GSEWQAVYVDNEGDMLLVGDDPWEEFCSTVRCIRILSPAEIQK 742
Query: 767 MTI 769
+T+
Sbjct: 743 LTV 745
>gi|357446777|ref|XP_003593664.1| Auxin response factor [Medicago truncatula]
gi|124360755|gb|ABN08732.1| Transcriptional factor B3; Auxin response factor [Medicago
truncatula]
gi|355482712|gb|AES63915.1| Auxin response factor [Medicago truncatula]
Length = 682
Score = 470 bits (1210), Expect = e-129, Method: Compositional matrix adjust.
Identities = 250/477 (52%), Positives = 312/477 (65%), Gaps = 13/477 (2%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVV 115
S+ ELWHACAGPL SLPKKG++VVY PQGH EQ + FP V ++ P +FC+V+
Sbjct: 49 SVCLELWHACAGPLISLPKKGSIVVYVPQGHFEQ---AHDFP---VSACNIPPHVFCRVL 102
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKT 175
DV+L A + +DEVY QV L+P+ + N+ + D +EE +TPHMFCKT
Sbjct: 103 DVKLHAEEGSDEVYCQVLLVPENQQLEQNVREGVI-DADAEEEDTEAIVKSTTPHMFCKT 161
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
LTASDTSTHGGFSVPRRAAEDCFPPLDY QQRPSQELVAKDLHG EWRFRHIYRGQPRRH
Sbjct: 162 LTASDTSTHGGFSVPRRAAEDCFPPLDYGQQRPSQELVAKDLHGSEWRFRHIYRGQPRRH 221
Query: 236 LLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVL 295
LLTTGWS FV++K LVSGDAVLFLRG+DGELRLGIRR+VQ ++ LS P L
Sbjct: 222 LLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGIRRAVQLKSSGSFGGLSGMQLDPGSL 281
Query: 296 SVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERR 355
V NA+S +S F V Y+PR + ++F+IP K++K + G RF+MRFE +D+ ERR
Sbjct: 282 MDVVNALSKRSAFSVCYNPRVSSSEFIIPVNKFLKSLDCSYSAGMRFRMRFETEDAAERR 341
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSP 415
G++ GI+D DP RWP SKW+CL+VRWD+ S H +VSPWEI+ S S S +
Sbjct: 342 FTGLIAGISDADPVRWPGSKWKCLLVRWDDIEASRHNNRVSPWEIEPSGSASNSSNLMAA 401
Query: 416 RMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHPL 475
+K+ R G + ++PV G G DF ES+R KVLQGQE +G +P Y P
Sbjct: 402 SLKRTRIGFTSAKLEFPV-PNGIGASDFGESLRFRKVLQGQEIMGMNTP-YDSINAQSPR 459
Query: 476 GFEMRA--PAHQSLALNGIRKDNINELVRALPTSYTGFVESNRFPKVLQGQEI--CP 528
+E+ P + ++ P++ GF ES RF KVLQGQEI CP
Sbjct: 460 LYELGRCYPGSNCSGIAATGNIRMHPAASDFPSNGIGFGESFRFQKVLQGQEILLCP 516
>gi|449528515|ref|XP_004171249.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 3-like
[Cucumis sativus]
Length = 730
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 300/681 (44%), Positives = 384/681 (56%), Gaps = 78/681 (11%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVD 116
I ELWHACAGPLTSLPKKG++VVY PQGH EQ+ FPP +DL P I C+V+D
Sbjct: 43 ICLELWHACAGPLTSLPKKGSLVVYLPQGHFEQMQE---FPPTP---YDLPPHILCRVID 96
Query: 117 VQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTK--STPHMFCK 174
VQL A +DEVY QV+L P+ E +E K E++ D E + +TPHMFCK
Sbjct: 97 VQLHAEAGSDEVYAQVSLFPENE----QMEHKMQEEMNNDSEEEDVEEGEKTTTPHMFCK 152
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLTASDTSTHGGFSVPRRAAEDCFPPLDY QQRPSQELVAKDL G++W+FRHIYRGQPRR
Sbjct: 153 TLTASDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELVAKDLLGLKWKFRHIYRGQPRR 212
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDS-ILSKQNSYPN 293
HLLTTGWS FV++K LVSGDAVLFLRG DGELRLGIRR+ Q ++G S I S+Q + +
Sbjct: 213 HLLTTGWSAFVNKKRLVSGDAVLFLRGNDGELRLGIRRAAQLKSGSAFSNICSQQLNSSS 272
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
++ VV NAVS+KS F V Y+PRA + FV+P+ K++K I + +G RF++ FE DD +
Sbjct: 273 IMDVV-NAVSSKSSFSVCYNPRAASSQFVLPFHKFLKSINHSFSVGLRFRLSFETDDGAD 331
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS 413
RR G +TG++D+DP RWP S+WR LMVRWD+ + H +VSPWEI+ S S+ +
Sbjct: 332 RRHTGHITGVSDVDPIRWPGSRWRSLMVRWDDGETNRHG-RVSPWEIEPSGSVSLSTNLV 390
Query: 414 SPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNH 473
P +K+ R GL + ++PV G G DF ES+R KVLQGQE +G+ +P +
Sbjct: 391 PPGLKRTRIGLSSTKLEFPV-PNGIGASDFGESLRFQKVLQGQEILGYSTPDGDNNNRCP 449
Query: 474 PLGFEMRAPAHQS---LALNGIRKDNINELVRALPTSYTGFV--ESNRFPKVLQGQEICP 528
P + H S L NG R IN TS G V ES ++ KVLQGQEI P
Sbjct: 450 PEKRRLIPGLHGSGIALMRNGPRNPLINS-----ETSSRGIVFDESFQYHKVLQGQEIFP 504
Query: 529 LRSLTGKVDLNLGTWGKPNFGCNSMN---------------------------------- 554
V N K N GC+ +
Sbjct: 505 SPYYGRAVATN---EVKANGGCSPADGIRLPRTKDGWPMAMQCENFLTRSSIPSVQVSSP 561
Query: 555 ----MYQASKPNIYPPPSESLSNMFFPYGDMPKTVQHHTMPPYASNLQRENVKLNSSSIQ 610
M+Q S + S + N F M K+ HH+ + ++ +N+ I
Sbjct: 562 SSVFMFQQSMVPVQSFNSHNRGN-FAEQRIMNKSTSHHSGTTFMTDH-----SMNTEFIP 615
Query: 611 MPAIGAEIRKANLLNEHKPVENIPTPTFKANMRSHKDGSFNGTAAGCKLFGFSLTSETPT 670
+ + N L P T T A KD S + AGC+LFGFSLT E
Sbjct: 616 QGMCPTSLGEQNQLGLSHP----STTTASAAFTVSKDLS-STCKAGCRLFGFSLTEEKNV 670
Query: 671 PSSQSPGKRSCTKVHKQGSLV 691
+ G + T ++ + V
Sbjct: 671 GNKDDKGSSATTPINAGTTTV 691
>gi|224116336|ref|XP_002331957.1| predicted protein [Populus trichocarpa]
gi|222874734|gb|EEF11865.1| predicted protein [Populus trichocarpa]
Length = 714
Score = 469 bits (1208), Expect = e-129, Method: Compositional matrix adjust.
Identities = 254/482 (52%), Positives = 329/482 (68%), Gaps = 25/482 (5%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVD 116
+ ELWHACAGPL SLPK+G+VVVYFPQGHLEQ+ P + + +DL +FC+VVD
Sbjct: 46 VCLELWHACAGPLISLPKRGSVVVYFPQGHLEQL------PDLPLAVYDLPSHVFCRVVD 99
Query: 117 VQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDL---GVDEEGGGRSPTKSTPHMFC 173
V+L A +DEVY QV+L+P+ E +E K E + +EE G + +TPHMFC
Sbjct: 100 VKLHAEAASDEVYAQVSLVPESE----EIEQKLREGIFEGDGEEEDGEATVKMTTPHMFC 155
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
KTLTASDTSTHGGFSVPRRAAEDCFPPLDY QQRPSQELVAKDLHG EW+FRHIYRGQPR
Sbjct: 156 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQQRPSQELVAKDLHGSEWKFRHIYRGQPR 215
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
RHLLTTGWS FV++K LVSGDAVLFLRG+DGELRLG+RR+ Q + G + ++ N N
Sbjct: 216 RHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGVRRAAQVKCG--PTFPAQWNHQLN 273
Query: 294 VLSV--VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDS 351
+S VANA+ST+S FH++Y+PRA+ ++F+IP+ K++K + G RFKMRFE +D+
Sbjct: 274 QISPGDVANAISTRSFFHIYYNPRASSSEFIIPFNKFLKSLDQSFSSGMRFKMRFETEDA 333
Query: 352 PERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSI 411
ERR G++TG+++LDP RWP SKW+CL+VRWD+ ++ +VSPWE++ S S S
Sbjct: 334 AERRYTGIITGVSELDPARWPGSKWKCLLVRWDD-REANRLSRVSPWEVEPSGSGSISSS 392
Query: 412 QS--SPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCD 469
+ +P +K+ R+GL + ++P+ G G F ES RS +VLQGQE + F + G D
Sbjct: 393 NNFMAPGLKRSRSGLPSSKAEFPI-PDGIGAPGFRESSRSQEVLQGQEIMSFNALYDGVD 451
Query: 470 TVN-HPLGFEMRAPAHQSLALNGIRKDNINELVRALPTSY--TGFVESNRFPKVLQGQEI 526
N HP P + S + + I + + SY GF ES RF KV QGQEI
Sbjct: 452 GQNQHPSEIRSCFPGYHSSGIAAL-GSGIRDSIATSNNSYKGIGFNESYRFHKVFQGQEI 510
Query: 527 CP 528
P
Sbjct: 511 FP 512
>gi|3228517|gb|AAC23589.1| ETTIN [Arabidopsis thaliana]
Length = 608
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 247/482 (51%), Positives = 313/482 (64%), Gaps = 46/482 (9%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVD 116
+ ELWHACAGPL SLPK+G++V+YFPQGHLEQ P + L P +FC+++D
Sbjct: 51 VCLELWHACAGPLISLPKRGSLVLYFPQGHLEQA------PDFSAAIYGLPPHVFCRILD 104
Query: 117 VQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRS----PTKSTPHMF 172
V+L A DEVY QV+LLP+ E ++E K E + +D +GG +TPHMF
Sbjct: 105 VKLHAETTTDEVYAQVSLLPESE----DIERKVREGI-IDVDGGEEDYEVLKRSNTPHMF 159
Query: 173 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQP 232
CKTLTASDTSTHGGFSVPRRAAEDCFPPLDY Q RPSQEL+A+DLHG+EWRFRHIYRGQP
Sbjct: 160 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQP 219
Query: 233 RRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYP 292
RRHLLTTGWS FV++K LVSGDAVLFLRG DG+LRLG+RR+ Q S QN
Sbjct: 220 RRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQYNQNMNH 279
Query: 293 NVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSP 352
N S VA+A+ST S+F + Y+P+A+ ++F+IP K++K++ P CIG RFK R E +D+
Sbjct: 280 NNFSEVAHAISTHSVFSISYNPKASWSNFIIPAPKFLKVVDYPFCIGMRFKARVESEDAS 339
Query: 353 ERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQ 412
ERR G+++GI+DLDP RWP SKWRCL+VRWD+ + + HQ++VSPWEI+ S S+
Sbjct: 340 ERRSPGIISGISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEPSGSISNSGSF 399
Query: 413 SSPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENV-GFVSPLYGCDTV 471
+ K+ R G+ + PD PVS G DFEES+R +VLQGQE GF++
Sbjct: 400 VTTGPKRSRIGISSGKPDIPVS-EGIRATDFEESLRFQRVLQGQEIFPGFINTC------ 452
Query: 472 NHPLGFEMRAPAHQSLALNGIRKDNINELVRALPTSYTGFVESNRFPKVLQGQEICPLRS 531
S G R+ T F +S F KVLQGQE P S
Sbjct: 453 --------------SDGGAGARRGRFKG---------TEFGDSYGFHKVLQGQETVPAYS 489
Query: 532 LT 533
+T
Sbjct: 490 IT 491
>gi|2245390|gb|AAB62404.1| auxin response transcription factor 3 [Arabidopsis thaliana]
Length = 608
Score = 469 bits (1207), Expect = e-129, Method: Compositional matrix adjust.
Identities = 247/482 (51%), Positives = 312/482 (64%), Gaps = 46/482 (9%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVD 116
+ ELWHACAGPL SLPK+G++V+YFPQGHLEQ P + L P +FC+++D
Sbjct: 51 VCLELWHACAGPLISLPKRGSLVLYFPQGHLEQA------PDFSAAIYGLPPHVFCRILD 104
Query: 117 VQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRS----PTKSTPHMF 172
V+L A DEVY QV+LLP+ E ++E K E + +D +GG +TPHMF
Sbjct: 105 VKLHAETTTDEVYAQVSLLPESE----DIERKVREGI-IDVDGGEEDYEVLKRSNTPHMF 159
Query: 173 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQP 232
CKTLTASDTSTHGGFSVPRRAAEDCFPPLDY Q RPSQEL+A+DLHG+EWRFRHIYRGQP
Sbjct: 160 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQP 219
Query: 233 RRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYP 292
RRHLLTTGWS FV++K LVSGDAVLFLRG DG+LRLG+RR+ Q S QN
Sbjct: 220 RRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQYNQNMNH 279
Query: 293 NVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSP 352
N S VA+A+ST S+F + Y+P+A+ ++F+IP K++K++ P CIG RFK R E +D+
Sbjct: 280 NNFSEVAHAISTHSVFSISYNPKASWSNFIIPAPKFLKVVDYPFCIGMRFKARVESEDAS 339
Query: 353 ERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQ 412
ERR G+++GI+DLDP RWP SKWRCL+VRWD+ + + HQ++VSPWEI+ S S+
Sbjct: 340 ERRSPGIISGISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEPSGSISNSGSF 399
Query: 413 SSPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENV-GFVSPLYGCDTV 471
+ K+ R G + PD PVS G DFEES+R +VLQGQE GF++
Sbjct: 400 VTTGPKRSRIGFSSGKPDIPVS-EGIRATDFEESLRFQRVLQGQEIFPGFINTC------ 452
Query: 472 NHPLGFEMRAPAHQSLALNGIRKDNINELVRALPTSYTGFVESNRFPKVLQGQEICPLRS 531
S G R+ T F +S F KVLQGQE P S
Sbjct: 453 --------------SDGGAGARRGRFKG---------TEFGDSYGFHKVLQGQETVPAYS 489
Query: 532 LT 533
+T
Sbjct: 490 IT 491
>gi|15226178|ref|NP_180942.1| auxin response factor 3 [Arabidopsis thaliana]
gi|46395605|sp|O23661.2|ARFC_ARATH RecName: Full=Auxin response factor 3; AltName: Full=Protein ETTIN
gi|12484199|gb|AAG53998.1|AF336917_1 auxin response transcription factor 3 [Arabidopsis thaliana]
gi|13430802|gb|AAK26023.1|AF360313_1 auxin response transcription factor 3 (ETTIN/ARF3) [Arabidopsis
thaliana]
gi|3805770|gb|AAC69148.1| auxin response transcription factor 3 (ETTIN/ARF3) [Arabidopsis
thaliana]
gi|15810653|gb|AAL07251.1| auxin response transcription factor 3 [Arabidopsis thaliana]
gi|330253806|gb|AEC08900.1| auxin response factor 3 [Arabidopsis thaliana]
Length = 608
Score = 469 bits (1206), Expect = e-129, Method: Compositional matrix adjust.
Identities = 247/482 (51%), Positives = 312/482 (64%), Gaps = 46/482 (9%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVD 116
+ ELWHACAGPL SLPK+G++V+YFPQGHLEQ P + L P +FC+++D
Sbjct: 51 VCLELWHACAGPLISLPKRGSLVLYFPQGHLEQA------PDFSAAIYGLPPHVFCRILD 104
Query: 117 VQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRS----PTKSTPHMF 172
V+L A DEVY QV+LLP+ E ++E K E + +D +GG +TPHMF
Sbjct: 105 VKLHAETTTDEVYAQVSLLPESE----DIERKVREGI-IDVDGGEEDYEVLKRSNTPHMF 159
Query: 173 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQP 232
CKTLTASDTSTHGGFSVPRRAAEDCFPPLDY Q RPSQEL+A+DLHG+EWRFRHIYRGQP
Sbjct: 160 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQP 219
Query: 233 RRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYP 292
RRHLLTTGWS FV++K LVSGDAVLFLRG DG+LRLG+RR+ Q S QN
Sbjct: 220 RRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTAALSAQYNQNMNH 279
Query: 293 NVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSP 352
N S VA+A+ST S+F + Y+P+A+ ++F+IP K++K++ P CIG RFK R E +D+
Sbjct: 280 NNFSEVAHAISTHSVFSISYNPKASWSNFIIPAPKFLKVVDYPFCIGMRFKARVESEDAS 339
Query: 353 ERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQ 412
ERR G+++GI+DLDP RWP SKWRCL+VRWD+ + + HQ++VSPWEI+ S S+
Sbjct: 340 ERRSPGIISGISDLDPIRWPGSKWRCLLVRWDDIVANGHQQRVSPWEIEPSGSISNSGSF 399
Query: 413 SSPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENV-GFVSPLYGCDTV 471
+ K+ R G + PD PVS G DFEES+R +VLQGQE GF++
Sbjct: 400 VTTGPKRSRIGFSSGKPDIPVS-EGIRATDFEESLRFQRVLQGQEIFPGFINTC------ 452
Query: 472 NHPLGFEMRAPAHQSLALNGIRKDNINELVRALPTSYTGFVESNRFPKVLQGQEICPLRS 531
S G R+ T F +S F KVLQGQE P S
Sbjct: 453 --------------SDGGAGARRGRFKG---------TEFGDSYGFHKVLQGQETVPAYS 489
Query: 532 LT 533
+T
Sbjct: 490 IT 491
>gi|225030806|gb|ACN79516.1| auxin response factor 3b [Lotus japonicus]
Length = 718
Score = 467 bits (1202), Expect = e-128, Method: Compositional matrix adjust.
Identities = 252/480 (52%), Positives = 315/480 (65%), Gaps = 26/480 (5%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVD 116
+ ELWHACAGPL SLPKKG+VVVY PQGH EQ FP V +++ +FC+V+D
Sbjct: 46 VCLELWHACAGPLISLPKKGSVVVYIPQGHFEQAQD---FP---VTAYNIPTHVFCRVLD 99
Query: 117 VQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKST-PHMFCKT 175
V+L A + +DEVY QV L+P+ E NL D D E + KST PHMFCKT
Sbjct: 100 VKLHAEEGSDEVYCQVLLIPESEQVEKNLGEG---DTDADGEEDTEAMVKSTTPHMFCKT 156
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
LTASDTSTHGGFSVPRRAAEDCFPPLDY QQRPSQELVAKDLHG+EW+FRHIYRGQPRRH
Sbjct: 157 LTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGLEWKFRHIYRGQPRRH 216
Query: 236 LLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVL 295
LLTTGWS FV++K LVSGDAVLFLRG DGELRLGIRR+ Q ++ + S Q+ P L
Sbjct: 217 LLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGIRRAAQLKSVGSFAAPSGQHLSPGTL 276
Query: 296 SVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERR 355
VANA+S++ F Y+PR + ++F+IP K++K + +G RF+MRFE +DS ERR
Sbjct: 277 MDVANALSSRCAFSACYNPRVSSSEFIIPVNKFMKSLDCSYSVGMRFRMRFETEDSAERR 336
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSP 415
G+V GI+D+DP RWP SKWRCL+VRWD+ I + +VSPWEI+ P S+
Sbjct: 337 FTGLVLGISDVDPVRWPGSKWRCLLVRWDD-IEAGRHNRVSPWEIE------PFGSASNN 389
Query: 416 RM----KKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTV 471
M K+ R G+ + ++P + G G DF ES+R KVLQGQE +G +P G +
Sbjct: 390 LMAAGLKRTRIGMTSTKMEFP-APNGIGTSDFGESLRFQKVLQGQEIMGVNTPFDGINAQ 448
Query: 472 N---HPLGFEMRAPAHQSLALNGIRKDNINELVRALPTSYTGFVESNRFPKVLQGQEICP 528
+ + LG +A G + ++ + TGF ES RFPKVLQGQEI P
Sbjct: 449 SPRFYELGRCYPGSNCSGIATTG-NSMRVPQVTSDFSCNGTGFSESFRFPKVLQGQEILP 507
>gi|413946509|gb|AFW79158.1| hypothetical protein ZEAMMB73_920641 [Zea mays]
Length = 736
Score = 467 bits (1202), Expect = e-128, Method: Compositional matrix adjust.
Identities = 296/729 (40%), Positives = 394/729 (54%), Gaps = 79/729 (10%)
Query: 29 GCVCYLNS-SSSSSSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHL 87
G C S +SS+++ + S+++ ELWHACAGP+ LP+KG+VVVY PQGH+
Sbjct: 20 GNACSQQSRTSSAATFPPPPPNQPRPSAAVCLELWHACAGPVAPLPRKGSVVVYLPQGHI 79
Query: 88 EQVASSSAFPPIEVPNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEA 147
E + ++A P L P +FC+VVDV L A+ DEVY Q+AL+ + E L
Sbjct: 80 EHLGDAAAAGGGAPPPVALPPHVFCRVVDVTLHADASTDEVYAQLALVAENEDVARRLRG 139
Query: 148 KQLEDLGVDEEGGGRSPTKST--PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQ 205
+ + D + G + + PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDY Q
Sbjct: 140 RSEDGSAEDGDEGETVKQRFSRMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQ 199
Query: 206 QRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGE 265
QRPSQELVAKDLHG EWRFRHIYRGQPRRHLLTTGWS FV++K LVSGDAVLFLRG +GE
Sbjct: 200 QRPSQELVAKDLHGTEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDNGE 259
Query: 266 LRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPY 325
LRLG+RR+ Q +NG L Q L VA+AV+TKS+FH++Y+PR + ++F+IP+
Sbjct: 260 LRLGVRRAAQLKNGSAFPALYNQCLNLGSLPNVAHAVATKSVFHIYYNPRLSQSEFIIPF 319
Query: 326 QKYVKIIMNPICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDE 385
K++K P G+RFK+++E DD+ ERRC G++ GI D DP W SKW+CLMVRWD+
Sbjct: 320 SKFIKSFSQPFSAGSRFKVKYESDDASERRCTGIIAGIGDADPM-WRGSKWKCLMVRWDD 378
Query: 386 CIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGGVLDFEE 445
+ ++SPWEI+ + S+ S S+P K+L+ L PDY V G G DF E
Sbjct: 379 DVDFRQPNRISPWEIELTSSVSG-SHMSAPNAKRLKPCLPHVNPDYLV-PNGSGRPDFAE 436
Query: 446 SVRSSKVLQGQENVGF-------VSPLYGCDTVNHPLGFEMRAPAHQSLALNGIRKDNIN 498
S + KVLQGQE +G+ V+ C+ N E S + G+ + +
Sbjct: 437 SAQFHKVLQGQELLGYRTHDNAAVATSQPCEATNMQYIDERSCSNDASNIIPGVPRIGVR 496
Query: 499 ELVRALPTSY--TGFVESNRFPKVLQGQEIC-PLRSLTGKVDLNLGT------------- 542
+ + SY +GF ES RF KVLQGQE+ P R VD +L
Sbjct: 497 TPLGSPRFSYRCSGFGESPRFQKVLQGQEVFHPYRGTL--VDASLSNSGFHQQDGSHVPT 554
Query: 543 ----WGKPNFGCNSMNMYQASKPNIYPPPSESLSNMFFPYGDMPKTVQHHTMPPYASNLQ 598
W GC + QA P + S S + F GD PK M P+
Sbjct: 555 QASKWHAQLHGC-AFRGQQA--PAVPSQSSSPPSVLMFQRGD-PK------MSPFEFGHF 604
Query: 599 RENVKLNSSSIQMPAIG-AEIRKANLLNEHKPVENIPTPTFKANMRSHKDGSFNGTAA-- 655
N K + ++ + A G + +L H ++ T ++ K A+
Sbjct: 605 HVNKKEDRRAMFVHAGGIGGTEQTTMLQAH----HVSGGTGNRDVTVEKSHPAVAAASDN 660
Query: 656 ------GCKLFGFSLTSETPTPSSQSPGK---------------------RSCTKVHKQG 688
CK+FG SLT + P + G SC VH+Q
Sbjct: 661 REVSKNSCKIFGISLTEKVPAMKEKGCGDINTNYPSPFLSLKQQVPKSLGNSCATVHEQR 720
Query: 689 SLVGRAIDL 697
+V R ID+
Sbjct: 721 PVVARVIDV 729
>gi|291196883|emb|CAX63135.1| ARF-L2 protein [Ginkgo biloba]
Length = 912
Score = 467 bits (1201), Expect = e-128, Method: Compositional matrix adjust.
Identities = 248/464 (53%), Positives = 310/464 (66%), Gaps = 58/464 (12%)
Query: 51 SSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAF-----------PPI 99
++ SSI ELWHACAGPL SLP KG++VVYFPQGH+EQ+ + PP+
Sbjct: 23 TACQSSICSELWHACAGPLISLPPKGSLVVYFPQGHMEQLIDNDPHKFGFDSPLKFTPPV 82
Query: 100 ------------------------EVPNFDLQPQIFCKVVDVQLLANKENDEVYTQVALL 135
+ P ++L PQI C+V++V L A++E DEVY Q+ L+
Sbjct: 83 APVLEKTAVASMHVAASIKQGVDQQTPPYNLPPQILCRVLNVNLHADQEMDEVYAQLTLV 142
Query: 136 PQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAE 195
P+ E +E + + T TPHMFCKTLTASDTSTHGGFSVPRRAAE
Sbjct: 143 PESEKSEKCMEEQV------------PASTSCTPHMFCKTLTASDTSTHGGFSVPRRAAE 190
Query: 196 DCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDA 255
DCFPPLDY QQRPSQELVAKDLHG EWRFRHI+RGQPRRHLLTTGWS+FVS K LVSGDA
Sbjct: 191 DCFPPLDYTQQRPSQELVAKDLHGREWRFRHIFRGQPRRHLLTTGWSVFVSNKRLVSGDA 250
Query: 256 VLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPR 315
VLFLRG++GELRLGIRR+ + ++ S+LS Q+ + VL+ A+AV+TKSMFH+F++PR
Sbjct: 251 VLFLRGENGELRLGIRRASRQQSYASSSVLSSQSMHLGVLTAAAHAVATKSMFHIFFNPR 310
Query: 316 ATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSK 375
+ A+FVIPY KYVK +P+ IG RFKMRFE +D+ ERR G +TGI D++P RWP SK
Sbjct: 311 TSPAEFVIPYHKYVKSFNHPLAIGMRFKMRFETEDAAERRYTGTITGIGDVEPARWPGSK 370
Query: 376 WRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSA 435
WR L V WDE ++ QE+VSPWEI+ +S L+I + PR+K+LRT Q D +
Sbjct: 371 WRSLKVEWDEHAANERQERVSPWEIEPFISSTGLNIPAGPRIKRLRTSFQPTSTDLCI-P 429
Query: 436 RGGGVLDFEESVRSSKVLQGQENVGFVSPLY------GCDTVNH 473
GG ++DF ES R KVLQGQE +SPL G D+V H
Sbjct: 430 DGGRLVDFGESSRFQKVLQGQE----ISPLKASFISSGGDSVKH 469
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/136 (58%), Positives = 99/136 (72%), Gaps = 3/136 (2%)
Query: 672 SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILY 731
SS RSCTKVHKQG+ VGRA+DL + +GY++L+ ELE LFNME LL DP KGW ++Y
Sbjct: 777 SSVQASGRSCTKVHKQGNAVGRAVDLSKFHGYDELIRELERLFNMENLLSDPEKGWHVVY 836
Query: 732 TDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGT-TDDTQSCLDQAPVIMEVSV 790
TD+E D+M+VGDDPW EFC+ V KI IYT+EEVEKMT G +DD QSC +Q P ++ V
Sbjct: 837 TDNEGDIMLVGDDPWQEFCSIVCKIMIYTREEVEKMTPGMLSDDAQSCFEQQPTTLD--V 894
Query: 791 SKSSSVSQPDSSPTVV 806
SK S Q SSP +
Sbjct: 895 SKCSIDGQDSSSPLIA 910
>gi|295844322|gb|ADG43158.1| auxin response factor 24 [Zea mays]
Length = 736
Score = 466 bits (1200), Expect = e-128, Method: Compositional matrix adjust.
Identities = 296/729 (40%), Positives = 394/729 (54%), Gaps = 79/729 (10%)
Query: 29 GCVCYLNS-SSSSSSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHL 87
G C S +SS+++ + S+++ ELWHACAGP+ LP+KG+VVVY PQGH+
Sbjct: 20 GNACSQQSRTSSAATFPPPPPNQPRPSAAVCLELWHACAGPVAPLPRKGSVVVYLPQGHI 79
Query: 88 EQVASSSAFPPIEVPNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEA 147
E + ++A P L P +FC+VVDV L A+ DEVY Q+AL+ + E L
Sbjct: 80 EHLGDAAAAGGGAPPPVALPPHVFCRVVDVTLHADASTDEVYAQLALVAENEDVARRLRG 139
Query: 148 KQLEDLGVDEEGGGRSPTKST--PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQ 205
+ + D + G + + PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDY Q
Sbjct: 140 RSEDGSAEDGDEGETVKQRFSRMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQ 199
Query: 206 QRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGE 265
QRPSQELVAKDLHG EWRFRHIYRGQPRRHLLTTGWS FV++K LVSGDAVLFLRG +GE
Sbjct: 200 QRPSQELVAKDLHGTEWRFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDNGE 259
Query: 266 LRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPY 325
LRLG+RR+ Q +NG L Q L VA+AV+TKS+FH++Y+PR + ++F+IP+
Sbjct: 260 LRLGVRRAAQLKNGSAFPALYNQCLNLGSLPNVAHAVATKSVFHIYYNPRLSQSEFIIPF 319
Query: 326 QKYVKIIMNPICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDE 385
K++K P G+RFK+++E DD+ ERRC G++ GI D DP W SKW+CLMVRWD+
Sbjct: 320 SKFIKSFSQPFSAGSRFKVKYESDDASERRCTGIIAGIGDADPM-WRGSKWKCLMVRWDD 378
Query: 386 CIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGGVLDFEE 445
+ ++SPWEI+ + S+ S S+P K+L+ L PDY V G G DF E
Sbjct: 379 DVDFRQPNRISPWEIELTSSVSG-SHMSAPNAKRLKPCLPHVNPDYLV-PNGSGRPDFAE 436
Query: 446 SVRSSKVLQGQENVGF-------VSPLYGCDTVNHPLGFEMRAPAHQSLALNGIRKDNIN 498
S + KVLQGQE +G+ V+ C+ N E S + G+ + +
Sbjct: 437 SAQFHKVLQGQELLGYRTHDNAAVATSQPCEATNMQYIDERSCSNDASNIIPGVPRIGVR 496
Query: 499 ELVRALPTSY--TGFVESNRFPKVLQGQEIC-PLRSLTGKVDLNLGT------------- 542
+ + SY +GF ES RF KVLQGQE+ P R VD +L
Sbjct: 497 TPLGSPRFSYRCSGFGESPRFQKVLQGQEVFHPYRGTL--VDASLSNSGFHQQDGSHVPT 554
Query: 543 ----WGKPNFGCNSMNMYQASKPNIYPPPSESLSNMFFPYGDMPKTVQHHTMPPYASNLQ 598
W GC + QA P + S S + F GD PK M P+
Sbjct: 555 QASKWHAQLHGC-AFRGQQA--PAVPSQSSSPPSVLMFQRGD-PK------MSPFEFGHF 604
Query: 599 RENVKLNSSSIQMPAIG-AEIRKANLLNEHKPVENIPTPTFKANMRSHKDGSFNGTAA-- 655
N K + ++ + A G + +L H ++ T ++ K A+
Sbjct: 605 HVNKKEDRRAMFVHAGGIGGTEQTTMLQAH----HVSGGTGNRDVTVEKSHPAVAAASDN 660
Query: 656 ------GCKLFGFSLTSETPTPSSQSPGK---------------------RSCTKVHKQG 688
CK+FG SLT + P + G SC VH+Q
Sbjct: 661 REVSKNSCKIFGISLTDKVPAMKEKGCGDINTNYPSPFLFLKQQVPKSLGNSCATVHEQR 720
Query: 689 SLVGRAIDL 697
+V R ID+
Sbjct: 721 PVVARVIDV 729
>gi|356555380|ref|XP_003546010.1| PREDICTED: auxin response factor 3-like [Glycine max]
Length = 728
Score = 464 bits (1194), Expect = e-128, Method: Compositional matrix adjust.
Identities = 248/477 (51%), Positives = 314/477 (65%), Gaps = 14/477 (2%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVV 115
S+ ELWHACAGPL SLPK+G+VVVY PQGH E V FP V FD+ P +FC+V+
Sbjct: 40 SVCLELWHACAGPLISLPKRGSVVVYLPQGHFEHVQD---FP---VNAFDIPPHVFCRVL 93
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKT 175
DV+L A + +DEVY QV L+P+ E +L ++ G +EE G + +TPHMFCKT
Sbjct: 94 DVKLHAEEGSDEVYCQVLLVPESEQVEHSLREGEIVADG-EEEDTGATVKSTTPHMFCKT 152
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
LTASDTSTHGGFSVPRRAAEDCFPPLDY QQRPSQELVAKDLHG+EWRFRHIYRGQPRRH
Sbjct: 153 LTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGLEWRFRHIYRGQPRRH 212
Query: 236 LLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVL 295
LLTTGWS FV++K LVSGDAVLFLRG DGELRLGIRR+ Q + ++ S Q P L
Sbjct: 213 LLTTGWSAFVNKKKLVSGDAVLFLRGNDGELRLGIRRAAQLKWAGSFAVPSGQQLNPATL 272
Query: 296 SVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERR 355
V NA+ST+ F V Y+PR F+IP K+++ + +G RF+MRFE +D+ +RR
Sbjct: 273 MDVVNALSTRCAFSVCYNPRYFSXXFIIPVHKFLESLDCSYSVGMRFRMRFETEDAADRR 332
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSP 415
G++ GI+D+DP RWP SKWRCL+VRWD+ + H +VSPWEI+ S S S +
Sbjct: 333 FTGLIAGISDVDPVRWPGSKWRCLLVRWDDIEAARHN-RVSPWEIEPSGSASNSSNLMAA 391
Query: 416 RMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHPL 475
+K+ R + + ++P + G DF ES+R KVLQGQE +G +P + P
Sbjct: 392 GLKRNRIEMTSAKLEFP-NPNGIQTSDFGESLRFRKVLQGQEILGVNTPPFDGINAQSPW 450
Query: 476 GFEMRAPAHQSLALNGIRKDNINELVRALPTSYT----GFVESNRFPKVLQGQEICP 528
+E+ + +GI N V + ++ GF ES RF KVLQGQEI P
Sbjct: 451 LYEL-GRCYPGSNCSGIPPTGNNIRVPHPASDFSCNGIGFSESFRFQKVLQGQEILP 506
>gi|242088827|ref|XP_002440246.1| hypothetical protein SORBIDRAFT_09g028450 [Sorghum bicolor]
gi|241945531|gb|EES18676.1| hypothetical protein SORBIDRAFT_09g028450 [Sorghum bicolor]
Length = 739
Score = 463 bits (1192), Expect = e-127, Method: Compositional matrix adjust.
Identities = 294/709 (41%), Positives = 377/709 (53%), Gaps = 93/709 (13%)
Query: 55 SSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFD-LQPQIFCK 113
+++ ELWHACAGP+ LP+KG VVVY PQGHLE + ++A P L P +FC+
Sbjct: 51 AAVCLELWHACAGPVAPLPRKGTVVVYLPQGHLEHLGDAAAAAAGGAPAPAALPPHVFCR 110
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLE--AKQLEDLGVDEEGGGRSPTKSTPHM 171
VVDV L A+ DEVY Q+AL+ + E L ++ D+ + PHM
Sbjct: 111 VVDVTLHADASTDEVYAQLALVAENEDVARRLRGGSEDGSAGDGDDGEAVKQRFSRMPHM 170
Query: 172 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQ 231
FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDY QQRPSQELVAKDLHG EWRFRHIYRGQ
Sbjct: 171 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWRFRHIYRGQ 230
Query: 232 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSY 291
PRRHLLTTGWS FV++K LVSGDAVLFLRG DGELRLG+RR+ Q +NG L Q S
Sbjct: 231 PRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAFPALYNQCSN 290
Query: 292 PNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDS 351
L+ VA+AV+TKS+FH++Y+PR + ++F+IPY K++K G RFKMR+E DD+
Sbjct: 291 LGSLANVAHAVATKSVFHIYYNPRLSQSEFIIPYSKFMKSFSQQFSAGLRFKMRYESDDA 350
Query: 352 PERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSI 411
ERRC GV+ GI D DP W SKW+CLMVRWD+ + ++SPWEI+ + S+ +
Sbjct: 351 SERRCTGVIAGIGDADPM-WRGSKWKCLMVRWDDDVDFRRPNRISPWEIELTSSVSGSHL 409
Query: 412 QSSPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGF-------VSP 464
S+P K+L+ L PPDY V G G DF ES + KVLQGQE +G+ V+
Sbjct: 410 -SAPNAKRLKPCL---PPDYLV-PNGSGCPDFAESAQFHKVLQGQELLGYRTRDNAAVAT 464
Query: 465 LYGCDTVNHPLGFEMRAPAHQSLALNGIRKDNINELVRALPTSY--TGFVESNRFPKVLQ 522
C+ N E + S ++ G+ + + + SY +GF ES RF KVLQ
Sbjct: 465 SQPCEARNMQYIDERSCSNNVSNSIPGVPRIGVRTPLGNPRFSYHCSGFGESPRFQKVLQ 524
Query: 523 GQEIC-PLRSLT---------------GKVDLNLGTWGKPNFGC---------------- 550
GQE+ P R V W GC
Sbjct: 525 GQEVFQPYRGTLVDPSLRNSGFHQQDGSHVPTQANKWHPQLHGCAFRGTQAPAIPSQSSS 584
Query: 551 -NSMNMYQASKPNIYPPPSESLSNMFFPYGDMPKTVQHHTMPPYASNLQRENVKLNSSSI 609
S+ M+Q P + P F + M K M +A + R
Sbjct: 585 PPSVLMFQRDNPKMSP--------FEFGHCHMDKNEDMRAMFGHAGGIGRTE-------- 628
Query: 610 QMPAIGAEIRKANLLNEHKPVENIPTPTFKANMRSHKDGSFNG--TAAGCKLFGFSLTSE 667
Q + A + N VE F+ + +DGS N T CK+FG SLT +
Sbjct: 629 QTMMLQAHNVSGGMGNRDVTVEK-----FQPTVAVGRDGSDNREVTKNSCKIFGISLTEK 683
Query: 668 TPTPSSQSPGK-------------------RSCTKVHKQGSLVGRAIDL 697
P + G SC +H+Q +VGR ID+
Sbjct: 684 VPAIKEKDCGDTNYPSPFLSLKQHVPKSLGNSCATIHEQRPVVGRVIDV 732
>gi|291196861|emb|CAX63106.1| ETTIN protein [Cabomba aquatica]
Length = 827
Score = 462 bits (1189), Expect = e-127, Method: Compositional matrix adjust.
Identities = 248/489 (50%), Positives = 320/489 (65%), Gaps = 21/489 (4%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVD 116
+ ELWHACAGPL SLP+KG+VVVYFPQGHLEQ + +DL PQI C+VVD
Sbjct: 36 VCLELWHACAGPLISLPQKGSVVVYFPQGHLEQHQVQES----HTRTYDLPPQIICRVVD 91
Query: 117 VQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTL 176
V+L A NDE+Y QV+LL + E+ L+ + + G + + ++ PHMFCKTL
Sbjct: 92 VKLQAEVSNDELYAQVSLLAEDEVGFLDESVVRSLNGGEEVSEENQGIRRTIPHMFCKTL 151
Query: 177 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHL 236
TASDTSTHGGFSVPRRAAEDCFPPLDY QQRPSQEL AKDL+G WRFRHIYRGQPRRHL
Sbjct: 152 TASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELTAKDLYGFIWRFRHIYRGQPRRHL 211
Query: 237 LTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSV-QPRNGLPDSILSKQNSYPNVL 295
LTTGWS F ++K L GDAVLFLR DGELRLGIRR+ Q + +P + L Q S N+L
Sbjct: 212 LTTGWSSFANKKKLKPGDAVLFLRVDDGELRLGIRRATRQSQCCVPYTGLLCQLSRVNML 271
Query: 296 SVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERR 355
S+VA+A+S K +FH++Y+PRA+ A+F++PY KY++ +P +G R K+R E +D+ E+R
Sbjct: 272 SMVADALSVKKLFHIYYNPRASPAEFMVPYWKYLRSCSHPFSMGMRLKIRVETEDAVEKR 331
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDR-----SVSLPPLS 410
G +TG+ D+DP RWPNSKWRCL+VRWD+ + ++VSPWEI++ S S P S
Sbjct: 332 YTGHITGVGDVDPIRWPNSKWRCLVVRWDDNADTCLHDRVSPWEIEQSSLVSSFSFPLKS 391
Query: 411 IQSSPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDT 470
P+M P PD G G+ ES R KVLQGQE GF++P ++
Sbjct: 392 TSKRPKMNFPSIITDIPLPD------GSGLSGSTESSRFQKVLQGQEISGFIAPYNDINS 445
Query: 471 VN-HPLGFEMRAPAHQSLALNGIRKDNINELVRALPTSYTGFVESNRFPKVLQGQEICPL 529
+N +GF+ P + + +R + V + TGF ESNRF KVLQGQE
Sbjct: 446 LNDQAVGFQSHYPLPNTGTVGFLRTPSG---VSSDHQQCTGFGESNRFVKVLQGQENVRA 502
Query: 530 RSLTGKVDL 538
+ L ++DL
Sbjct: 503 KKL-AQIDL 510
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/148 (48%), Positives = 98/148 (66%), Gaps = 6/148 (4%)
Query: 634 PTPTFKANMRSHKDGSFNGTAAGCKLFGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGR 693
P F + M SH+ +F T K+ G L+ + S P R CTKV+KQ SLVGR
Sbjct: 682 PLDIFHSGMTSHQ--TFPPTDP--KISGIHLSPNSG--GSLQPSTRRCTKVYKQESLVGR 735
Query: 694 AIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEV 753
A+DL +L GY+DL+ ELE L +MEGLLRDP KGW+++YTD+ +D+M+VGD+PW EFC+ V
Sbjct: 736 AVDLTKLTGYDDLIFELERLLDMEGLLRDPRKGWQVVYTDNVSDMMLVGDEPWQEFCDIV 795
Query: 754 SKIHIYTQEEVEKMTIGTTDDTQSCLDQ 781
SKIHI+T+EEV + + + C D
Sbjct: 796 SKIHIFTREEVTLASRVKSYEDNCCSDH 823
>gi|326528225|dbj|BAJ93294.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 731
Score = 459 bits (1180), Expect = e-126, Method: Compositional matrix adjust.
Identities = 294/733 (40%), Positives = 397/733 (54%), Gaps = 86/733 (11%)
Query: 19 CNGDCGKNNSGCVCYLNSSSSSSSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNV 78
C GDC + S + S+ ++ S S++ ELWHACAGP+ +P+KG+V
Sbjct: 27 CGGDCSSQSHSHSHSQTQSGYNGQASSPVATPPSRPSAVCLELWHACAGPVAPMPRKGSV 86
Query: 79 VVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQP 138
VVY PQGHL+ + + A +FC+VVDV L A+ DEVY Q++LLP+
Sbjct: 87 VVYLPQGHLDHLGDAPAHAAASPAAAVPP-HVFCRVVDVTLHADATTDEVYAQLSLLPEN 145
Query: 139 ELEGLNLEAKQLEDLGVDEEGGG-RSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDC 197
E E + + +D+ E+G + PHMFCKTLTASDTSTHGGFS PRRAAEDC
Sbjct: 146 E-ELVRRMREATDDVSGGEDGETVKQRFARMPHMFCKTLTASDTSTHGGFSAPRRAAEDC 204
Query: 198 FPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVL 257
FP LDY QQRPSQELVAKDLHG EW+FRHIYRGQPRRHLLTTGWS FV++K LVSGDAVL
Sbjct: 205 FPHLDYNQQRPSQELVAKDLHGTEWKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVL 264
Query: 258 FLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRAT 317
FLRG DGELRLG+RR+VQ +NG L Q S L+ V +AVSTKSMF +FY+PR +
Sbjct: 265 FLRGDDGELRLGVRRAVQLKNGSAFPALYSQCSNLGTLANVTHAVSTKSMFQIFYNPRLS 324
Query: 318 HADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWR 377
++F++PY K+ K I P +G RFKMR+E +D+ ERR G++TG D DP RW SKW+
Sbjct: 325 QSEFIVPYWKFTKSISQPFSVGWRFKMRYESEDAAERRYTGIITGTVDADP-RWRGSKWK 383
Query: 378 CLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARG 437
CL+VRWD+ ++SPWEI+ + S S ++P K+++ L P+Y V G
Sbjct: 384 CLLVRWDDDGEFRRPNRLSPWEIELT-SAASGSHLAAPTSKRMKPYLPHANPEYTVPY-G 441
Query: 438 GGVLDFEESVRSSKVLQGQENVGF-------VSPLYGCDTVNHPLGFEMRAPAHQS-LAL 489
GG DF ES + KVLQGQE +G+ V+ C+ N E + S L
Sbjct: 442 GGRPDFAESAQLRKVLQGQELLGYRTHDGTAVATSQPCEARNLQYIDERGCSNNGSNNVL 501
Query: 490 NGIRKDNINELVRALPTSYTGFVESNRFPKVLQGQEIC-PLRSLTGKVDLNLGTWGKPN- 547
G+ + + +P +GF ES RF KVLQGQE+ P R + G + + +
Sbjct: 502 GGVPSHGVRTPL-GIPYHCSGFGESQRFQKVLQGQEVFRPYRGSLVDARMRSGGFHQQDG 560
Query: 548 -FGCNSMNMYQASKPNI--YPPPSE---------------------SLSNMFFPYGDMPK 583
+ ++ ++A + + Y PP++ +S F +G M K
Sbjct: 561 PYASALLDKWRAQQQHAFGYGPPAQVLPSQPSLSPPSVLMFQKADPKVSRFEFGHGHMDK 620
Query: 584 TVQHHTMPPYASNLQRENV-KLNSSSIQMPAIGAEIRKANLLNEHKPVENI-PTPTFKAN 641
YA + E V + +S P +G+ +++ VEN PT
Sbjct: 621 NEDDW----YARFVSAEGVGRAEQASSLRPHLGS----GEVIDSRVAVENTGAAPT---- 668
Query: 642 MRSHKDGSFNGTAAGCKLFGFSLTSE-----------------TPTPSSQSPGKRSCTKV 684
CK+FG SL + +PT +S G SC V
Sbjct: 669 -------------NSCKIFGISLAEKVRARDEMVCDDGGANYSSPTQPLKSLGN-SCATV 714
Query: 685 HKQGSLVGRAIDL 697
H+Q +VGRAID+
Sbjct: 715 HEQRPVVGRAIDV 727
>gi|218197268|gb|EEC79695.1| hypothetical protein OsI_20981 [Oryza sativa Indica Group]
Length = 712
Score = 458 bits (1178), Expect = e-126, Method: Compositional matrix adjust.
Identities = 291/696 (41%), Positives = 394/696 (56%), Gaps = 58/696 (8%)
Query: 46 NSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFD 105
SS + + + ++ ELWHACAGP+ LP+KG VVVY PQGHLE + + A
Sbjct: 24 GSSPAPARAGAVCLELWHACAGPVAPLPRKGGVVVYLPQGHLEHLGDAPA---AAAAAAA 80
Query: 106 LQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPT 165
+ P +FC+VVDV LLA+ DEVY Q++L+P+ E A++ +D ++ G +
Sbjct: 81 VPPHVFCRVVDVTLLADAATDEVYAQLSLVPEKEEV-----ARRADDGEGEDGDGMKQRF 135
Query: 166 KSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFR 225
PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDY QQRPSQELVAKDLHG EWRFR
Sbjct: 136 ARMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWRFR 195
Query: 226 HIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSIL 285
HIYRGQPRRHLLTTGWS FV++K LVSGDAVLFLRG DGELRLG+RR+ Q +NG L
Sbjct: 196 HIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAFPAL 255
Query: 286 SKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMR 345
Q S L+ VA+AV+T+S+F+++Y+PR + ++F++PY K++K + P +G RFKMR
Sbjct: 256 YNQCSNLGTLANVAHAVATESVFNIYYNPRLSQSEFIVPYWKFMKSLSQPFSVGLRFKMR 315
Query: 346 FEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS 405
+E +D+ ERR G++TG D DP W SKW+CL+VRWD+ +VSPWEI+ + S
Sbjct: 316 YESEDASERRYTGIITGSGDTDPM-WHGSKWKCLLVRWDDDAEFRRPNRVSPWEIELTSS 374
Query: 406 LPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPL 465
+ + S+P K+L+ L P+Y V RGGG DF ES + KVLQGQE +GF S
Sbjct: 375 VSGSHL-STPHSKRLKPCLPHVNPEYMV-PRGGGCPDFAESAQFHKVLQGQELLGFKSHG 432
Query: 466 YGCDTVNHP-----LGF--EMRAPAHQSLALNGIRKDNINELVRALPTSY--TGFVESNR 516
+ P L + E + S ++ G+ + + SY +GF ES R
Sbjct: 433 GTAAATSQPCEARHLQYIDERSCSSDASNSILGVPRLGDRAPLGNPGFSYHCSGFGESQR 492
Query: 517 FPKVLQGQEICPLRSLTGK-VDLNLGTWG-----KPNFGCNSMNMYQA---SKPNIYPPP 567
KVLQGQE+ R G VD ++G+ G P +N +QA + + PP
Sbjct: 493 LQKVLQGQEL--FRPYRGTLVDASMGSNGFHQQDSPR-APGVVNKWQAQLHGRAAFHGPP 549
Query: 568 SESLSNMFFPYGDMPKTVQHHT-MPPYASNLQRENVKLNSSSIQM-PAIGAEIRKANLLN 625
+ +L + + Q ++ MP + + N ++ P+ G E R+ +
Sbjct: 550 ALALPSQSSSPPSVLMFQQANSKMPRLEFGHGQLDKHENDRRVRFGPSEGIERREQRIPL 609
Query: 626 EHKPVE------NIPTPTFKANMRSHKDGSFNGTAA--GCKLFGFSLTSETPTPSSQSPG 677
+ P + + R KDG N CK+FG SLT + P G
Sbjct: 610 QPYPTSGEVIDGQVTVEKSHSPGRHGKDGPDNKAVGTNSCKIFGISLTEKVPAREELDDG 669
Query: 678 K----------------RSCTKVHKQGSLVGRAIDL 697
SC VH+Q +VGR ID+
Sbjct: 670 DANYSLQSLKQVPKSLGNSCATVHEQRPVVGRVIDI 705
>gi|379323194|gb|AFD01296.1| auxin response factor 3-1 [Brassica rapa subsp. pekinensis]
Length = 605
Score = 457 bits (1177), Expect = e-126, Method: Compositional matrix adjust.
Identities = 256/536 (47%), Positives = 324/536 (60%), Gaps = 53/536 (9%)
Query: 59 FELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQ 118
ELWHACAGPL SLPK+G++V+YFPQGHLEQ P + L P +FC+++DV+
Sbjct: 51 LELWHACAGPLISLPKRGSLVLYFPQGHLEQA------PDFSAAIYGLPPHVFCRILDVK 104
Query: 119 LLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRS----PTKSTPHMFCK 174
L A DEVY QV+LLP+ E ++E K E + +D +GG +TPHMFCK
Sbjct: 105 LHAETATDEVYAQVSLLPESE----DVERKVREGV-IDVDGGEEDYEVVKRTNTPHMFCK 159
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLTASDTSTHGGFSVPRRAAEDCFPPLDY Q RPSQEL+A+DLHG+EWRFRHIYRGQPRR
Sbjct: 160 TLTASDTSTHGGFSVPRRAAEDCFPPLDYTQPRPSQELLARDLHGLEWRFRHIYRGQPRR 219
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS FV++K LVSGDAVLFLRG DG+LRLG+RR+ Q S QN N
Sbjct: 220 HLLTTGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGASAFSSQYNQNMNHNN 279
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
+ V +A+ST S F+++Y+P+A+ ++F+IP K++K + P CIG RFK R E +D+ ER
Sbjct: 280 FAEVVHAISTNSAFNIYYNPKASWSNFIIPAPKFLKTVDYPFCIGMRFKARVESEDASER 339
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDEC-IGSDHQEQVSPWEIDRSVSLPPLSIQS 413
R G++TGI DLDP RWP SKWRCL+VRWD+ HQ+++SPWEI+ S S+
Sbjct: 340 RSPGIITGINDLDPIRWPGSKWRCLLVRWDDTDANGHHQQRISPWEIEPSGSISSSGSFI 399
Query: 414 SPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENV-GFVSPLYGCDTVN 472
+ K+ R G + PD PVS G G DFEES+R +VLQGQE GF++
Sbjct: 400 TTGPKRSRIGFSSGKPDIPVS--GSGATDFEESLRFQRVLQGQEIFHGFINT-------- 449
Query: 473 HPLGFEMRAPAHQSLALNGIRKDNINELVRALPTSYTGFVESNRFPKVLQGQEICPLRSL 532
S G R+ T F +S F KVLQGQE P +
Sbjct: 450 ------------SSDGGAGARRGRFKG---------TEFGDSYGFHKVLQGQETVPAYPM 488
Query: 533 TGKVDLNLGTWGKPNFGCNSMNMYQASKPNIYPPPSESLSNMFFPYGDMPKTVQHH 588
D + N C +Q I PP S +S+ G + +HH
Sbjct: 489 M--TDQRHQGMSQRNIWCGP---FQNFSTRILPPSSVQVSSPLPSSGPNVRMEEHH 539
>gi|297724319|ref|NP_001174523.1| Os05g0563400 [Oryza sativa Japonica Group]
gi|75160561|sp|Q8S985.1|ARFO_ORYSJ RecName: Full=Auxin response factor 15; AltName: Full=ETTIN-like
protein 1; AltName: Full=OsETTIN1
gi|19352033|dbj|BAB85910.1| Arabidopsis ETTIN-like protein 1 [Oryza sativa]
gi|222632562|gb|EEE64694.1| hypothetical protein OsJ_19549 [Oryza sativa Japonica Group]
gi|255676573|dbj|BAH93251.1| Os05g0563400 [Oryza sativa Japonica Group]
Length = 712
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 290/696 (41%), Positives = 394/696 (56%), Gaps = 58/696 (8%)
Query: 46 NSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFD 105
SS + + + ++ ELWHACAGP+ LP+KG VVVY PQGHLE + + A
Sbjct: 24 GSSPAPARAGAVCLELWHACAGPVAPLPRKGGVVVYLPQGHLEHLGDAPA---AAAAAAA 80
Query: 106 LQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPT 165
+ P +FC+VVDV LLA+ DEVY Q++L+P+ E A++ +D ++ G +
Sbjct: 81 VPPHVFCRVVDVTLLADAATDEVYAQLSLVPEKEEV-----ARRADDGEGEDGDGMKQRF 135
Query: 166 KSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFR 225
PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDY QQRPSQELVAKDLH EWRFR
Sbjct: 136 ARMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHSTEWRFR 195
Query: 226 HIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSIL 285
HIYRGQPRRHLLTTGWS FV++K LVSGDAVLFLRG DGELRLG+RR+ Q +NG L
Sbjct: 196 HIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAFPAL 255
Query: 286 SKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMR 345
Q S L+ VA+AV+T+S+F+++Y+PR + ++F++PY K++K + P +G RFKMR
Sbjct: 256 YNQCSNLGTLANVAHAVATESVFNIYYNPRLSQSEFIVPYWKFMKSLSQPFSVGLRFKMR 315
Query: 346 FEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS 405
+E +D+ ERR G++TG D DP W SKW+CL+VRWD+ +VSPWEI+ + S
Sbjct: 316 YESEDATERRYTGIITGSGDTDPM-WHGSKWKCLLVRWDDDAEFRRPNRVSPWEIELTSS 374
Query: 406 LPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPL 465
+ + S+P K+L+ L P+Y V RGGG DF ES + KVLQGQE +GF S
Sbjct: 375 VSGSHL-STPHSKRLKPCLPHVNPEYMV-PRGGGCPDFAESAQFHKVLQGQELLGFKSHG 432
Query: 466 YGCDTVNHP-----LGF--EMRAPAHQSLALNGIRKDNINELVRALPTSY--TGFVESNR 516
+ P L + E + S ++ G+ + + SY +GF ES+R
Sbjct: 433 GTAAATSQPCEARHLQYIDERSCSSDASNSILGVPRLGDRAPLGNPGFSYHCSGFGESHR 492
Query: 517 FPKVLQGQEICPLRSLTGK-VDLNLGTWG-----KPNFGCNSMNMYQA---SKPNIYPPP 567
KVLQGQE+ R G VD ++G+ G P +N +QA + + PP
Sbjct: 493 LQKVLQGQEL--FRPYRGTLVDASMGSNGFHQQDSPR-APGVVNKWQAQLHGRAAFHGPP 549
Query: 568 SESLSNMFFPYGDMPKTVQHHT-MPPYASNLQRENVKLNSSSIQM-PAIGAEIRKANLLN 625
+ +L + + Q ++ MP + + N ++ P+ G E R+ +
Sbjct: 550 ALALPSQSSSPPSVLMFQQANSKMPRLEFGHGQLDKHENDRRVRFGPSEGIERREQRIPL 609
Query: 626 EHKPVE------NIPTPTFKANMRSHKDGSFNGTAA--GCKLFGFSLTSETPTPSSQSPG 677
+ P + + R KDG N CK+FG SLT + P G
Sbjct: 610 QPYPTSGEVIDGQVTVEKSHSPGRHGKDGPDNKAVGTNSCKIFGISLTEKVPAREELDDG 669
Query: 678 K----------------RSCTKVHKQGSLVGRAIDL 697
SC VH+Q +VGR ID+
Sbjct: 670 DANYSLQSLKQVPKSLGNSCATVHEQRPVVGRVIDI 705
>gi|350537897|ref|NP_001234316.1| auxin response factor 3 [Solanum lycopersicum]
gi|85069277|gb|ABC69710.1| auxin response factor 3 [Solanum lycopersicum]
Length = 747
Score = 453 bits (1166), Expect = e-124, Method: Compositional matrix adjust.
Identities = 250/486 (51%), Positives = 319/486 (65%), Gaps = 19/486 (3%)
Query: 47 SSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDL 106
+SS++ +S+ ELWHACAGPL SLPKKG+ VVY PQGHLE + S +P I +L
Sbjct: 42 TSSTTPAVASVCMELWHACAGPLISLPKKGSAVVYLPQGHLEHL---SEYPSIAC---NL 95
Query: 107 QPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTK 166
P +FC+VVDV+L A+ DEVY QV+L+P + + + + K + EE K
Sbjct: 96 PPHVFCRVVDVKLQADAATDEVYAQVSLVP--DNQQIEQKWKDGDIDADIEEEEIEGAGK 153
Query: 167 S-TPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFR 225
S TPHMFCKTLTASDTSTHGGFSVPRRAAEDCF PLDY+QQRPSQELVAKDLHG+EW+FR
Sbjct: 154 SITPHMFCKTLTASDTSTHGGFSVPRRAAEDCFAPLDYRQQRPSQELVAKDLHGIEWKFR 213
Query: 226 HIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSIL 285
HIYRGQPRRHLLTTGWS FV++K LVSGDAVLFLR DGELRLG+RR+ Q + S L
Sbjct: 214 HIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRTGDGELRLGVRRAAQAKTC--SSYL 271
Query: 286 SKQNSYPNVLSVV--ANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFK 343
+ + NV +V N +S+++ F++ Y+PR + +DF++PY K+ K + +P G RFK
Sbjct: 272 APCSKPLNVSGIVDAVNVISSRNAFNICYNPRDSSSDFIVPYHKFSKTLAHPFSAGMRFK 331
Query: 344 MRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRS 403
MR E +D+ E+R G+V G++++DP RWP SKWRCL+VRWD+ S H +VSPWEI+ S
Sbjct: 332 MRVETEDAAEQRFTGLVVGVSNVDPVRWPGSKWRCLLVRWDDLDVSRHN-RVSPWEIEPS 390
Query: 404 VSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVS 463
S P S P K+ R G D+P+ G V DF E R KVLQGQE + +
Sbjct: 391 GSAPVPSSLVMPSAKRTRVGFPISKADFPIPREGIAVSDFGEPSRFQKVLQGQEILRMHA 450
Query: 464 PLYGCDTVN-HPLGFEMRAPAHQSLALNGIRKDNINELVRALPTSY--TGFVESNRFPKV 520
P G D + P G P S ++ + ++I L S+ GF ES RF KV
Sbjct: 451 PYGGLDARSPRPAGTRC-FPGFPSSGISRM-GNSIRPLFGDTDKSHESIGFSESLRFNKV 508
Query: 521 LQGQEI 526
LQGQEI
Sbjct: 509 LQGQEI 514
>gi|414878884|tpg|DAA56015.1| TPA: hypothetical protein ZEAMMB73_705793 [Zea mays]
Length = 822
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 285/777 (36%), Positives = 417/777 (53%), Gaps = 101/777 (12%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKVV 115
+Y ELW ACAGPL ++P+ G++V YFPQGH+EQV AS + ++ +DL P++ C+V+
Sbjct: 21 LYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNQMRLYDLPPKLLCRVL 80
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKT 175
+V+L A + DEVY Q+ L+P+PE + E SP + FCKT
Sbjct: 81 NVELKAETDTDEVYAQIMLMPEPEQTDVPAEKP--------SSAPAASPRPAV-RSFCKT 131
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
LTASDTSTHGGFSV RR A++C PPLD Q P+QELVAKDLHG+EWRFRHI+RGQPRRH
Sbjct: 132 LTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQPRRH 191
Query: 236 LLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVL 295
LL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++ + +P S++S Q+ + VL
Sbjct: 192 LLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQSMHLGVL 251
Query: 296 SVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERR 355
+ +A++TKSMF V+Y PR + ++F+IPY +Y++ + N IG RF+MRFE +++PE+R
Sbjct: 252 ATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQR 311
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSP 415
G + G +LDP WP+S WR L VRWDE ++VSPW+I+ + S P + S
Sbjct: 312 FTGTIVGCENLDPL-WPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEPASSPPVNPLVHSS 370
Query: 416 RMKKLRTGLQAPPPDYPVSARGGGV---LDFEESVRSSKVLQGQENVGFVSPLYGC---- 468
R K+ R + P + V + G +D ++ + VLQGQE + + L
Sbjct: 371 RAKRPRQNVPPPSLESSVLTKEGATKVEIDSAQTQHQNSVLQGQEQMTLRNNLTESADSD 430
Query: 469 DTVNHPL------------GFEMRAPAHQSLALNGIRKDNINELVRALPTSYTG------ 510
TV P+ F+ R PA + G R+++ + A + T
Sbjct: 431 STVQKPMMWSPSLNGKAHTHFQQR-PAMDNWMPLGRRENDFKDTRSAFKDARTASQSFGD 489
Query: 511 ----FVE----------------SNRF--PKVLQGQEI-----CPLRSLTGKVDLNLGTW 543
FV+ ++RF P Q+ R+ T DL W
Sbjct: 490 TQGFFVQAYDDNHHRLSFKNQGSTHRFADPYFYMPQQSSVTVESSTRTQTANNDLCF--W 547
Query: 544 GKPN--FGCNSMNMYQASKPNIYPPPSESLSNMFFPYGDMPKTVQ-HHTMPPYASNLQRE 600
G N +G N + Q N PS L N FP + P+ V+ H T+ P+ RE
Sbjct: 548 GDQNAMYG-NPSDQQQGF--NFGQNPSSWL-NQPFPQVEQPRVVRPHATVAPFDLEKTRE 603
Query: 601 NVKLNSSSIQ--------------MPAIGAEI---RKANLLNEHKPVENIPTPTFKANMR 643
Q +PAI + R + +NE +PV+ +
Sbjct: 604 GSGFKIFGFQVDTTSPSPVQLSSPLPAIQEHVLQTRPSAPVNELQPVQ----------IE 653
Query: 644 SHKDGSFNGTAAGCKLFGFSLTSETPTPS-SQSPGKRSCTKVHKQGSLVGRAIDLWRLNG 702
+GS + + + S S SQ RSCTKVHKQG +GR++DL +
Sbjct: 654 CLPEGSVSTAGTATENIQQAPQSSKDIQSKSQGASTRSCTKVHKQGVALGRSVDLSKFTD 713
Query: 703 YNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIY 759
Y +L +EL+ +F+ EG L ++ W+I+YTD E D+M+VGDDPW + +H++
Sbjct: 714 YGELQAELDKMFDFEGELVSGSQNWQIVYTDDEGDMMLVGDDPWEVLQHSAQDLHLH 770
>gi|115439091|ref|NP_001043825.1| Os01g0670800 [Oryza sativa Japonica Group]
gi|122241144|sp|Q0JKI9.1|ARFB_ORYSJ RecName: Full=Auxin response factor 2; AltName: Full=ETTIN-like
protein 2; AltName: Full=OsETTIN2
gi|19352035|dbj|BAB85911.1| Arabidopsis ETTIN-like protein 2 [Oryza sativa]
gi|113533356|dbj|BAF05739.1| Os01g0670800 [Oryza sativa Japonica Group]
Length = 718
Score = 451 bits (1160), Expect = e-124, Method: Compositional matrix adjust.
Identities = 284/710 (40%), Positives = 384/710 (54%), Gaps = 93/710 (13%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVV 115
++ ELWHACAGP+ LP+KG+ VVY PQGHLE + ++ P P + P +FC+VV
Sbjct: 35 AVCLELWHACAGPVAPLPRKGSAVVYLPQGHLEHLGAA----PGSGPGAAVPPHVFCRVV 90
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKS---TPHMF 172
DV L A+ DEVY QV+L+ + E + ++ ED G +G G K PHMF
Sbjct: 91 DVSLHADAATDEVYAQVSLVA--DNEEVERRMREGED-GAACDGEGEDAVKRPARIPHMF 147
Query: 173 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQP 232
CKTLTASDTSTHGGFSVPRRAAEDCFPPLDY QRP QELVAKDLHG EWRFRHIYRGQP
Sbjct: 148 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSLQRPFQELVAKDLHGTEWRFRHIYRGQP 207
Query: 233 RRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYP 292
RRHLLTTGWS F+++K LVSGDAVLFLRG+DGELRLG+RR+ Q +N P L Q S
Sbjct: 208 RRHLLTTGWSGFINKKKLVSGDAVLFLRGEDGELRLGVRRAAQLKNASPFPALHNQISNT 267
Query: 293 NVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSP 352
+ LS VA+AV+ KS+FH++Y+PR + ++F+IPY K+++ P +G RFK+R+E +D+
Sbjct: 268 SSLSEVAHAVAVKSIFHIYYNPRLSQSEFIIPYWKFMRSFSQPFSVGMRFKLRYESEDAS 327
Query: 353 ERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQ 412
ERR G++ G + DP W SKW+CL+V+WD+ + VSPWEI+ S S+ +
Sbjct: 328 ERRRTGIIIGSREADPM-WHGSKWKCLVVKWDDDVECRRPNGVSPWEIELSGSVSGSHL- 385
Query: 413 SSPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVN 472
S+P K+L++ PD V G DF ES R KVLQGQE L G T +
Sbjct: 386 STPHSKRLKSCFPQVNPDI-VLPNGSVSSDFAESARFHKVLQGQE-------LLGLKTRD 437
Query: 473 HPLGFEMRAPAHQSLALNGIRKDNIN---------ELVRALPT-----SY--TGFVESNR 516
+ +A ++ R +IN L P+ SY +GF ES R
Sbjct: 438 GTVNTASQATEARNFQYTDERSCSINMSNNILGVPRLGVKTPSGNPGFSYHCSGFGESQR 497
Query: 517 FPKVLQGQEIC-PLRSLT--------------------GKVDLNLGTWGKPNFGCNSMNM 555
F +VLQGQE+ P R T G L G + G + +
Sbjct: 498 FQEVLQGQEVFRPYRGGTLSDACIRGSGFRQPDGNHAPGAAFKWLAPQGCDHHGITTSVL 557
Query: 556 YQASKPN---IYPPPSESLSNMFFPYG--DMPKTVQHHTMPPYASNLQRENVKLNSSSIQ 610
QAS P+ ++P S + + + YG D + +H + P ++ R + L
Sbjct: 558 PQASSPSSVLMFPQTSSKMPGLEYIYGCLDRNENSRHFKIGP-TQDMTRTDQTLR----- 611
Query: 611 MPAIGAEIRKANLLNEHKPVENIPTPTFKANMRSHKDGSFNGTAAGCKLFGFSLTSETPT 670
+ + +L+E E + +P A H+ + GCK+FG SLT +
Sbjct: 612 ---LWPHLISGKVLDECTRNEKLHSPVSGAE---HESNNKCLNTNGCKIFGISLTEKAQA 665
Query: 671 PSSQSPGK-------------------RSCTKVHKQGSLVGRAIDLWRLN 701
G SC VH+Q +VGR +D+ +N
Sbjct: 666 GDEVDCGNASYHSRLQSLKPQMPKSLGSSCATVHEQRPVVGRVVDISAVN 715
>gi|242058293|ref|XP_002458292.1| hypothetical protein SORBIDRAFT_03g030740 [Sorghum bicolor]
gi|241930267|gb|EES03412.1| hypothetical protein SORBIDRAFT_03g030740 [Sorghum bicolor]
Length = 702
Score = 450 bits (1157), Expect = e-123, Method: Compositional matrix adjust.
Identities = 282/690 (40%), Positives = 383/690 (55%), Gaps = 74/690 (10%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVV 115
++ ELWHACAGP+ LP+KG+ VVY PQGHLE + + VP P + C+VV
Sbjct: 32 AVCLELWHACAGPVAPLPRKGSAVVYLPQGHLEHIGGDADAAGAAVP-----PHVLCRVV 86
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQL--EDLGVD-EEGGGRSPTKSTPHMF 172
DV L A+ DEVY +V+LLP+ E A+ ED D E+G P TPHMF
Sbjct: 87 DVTLHADGATDEVYARVSLLPEDEEAERRARARVREDEDADRDGEDGAAMKPLARTPHMF 146
Query: 173 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQP 232
CKTLTASDTSTHGGFSVPRRAAEDCFPPLDY QQRPSQELVAKDLHG EW+FRHIYRGQP
Sbjct: 147 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKFRHIYRGQP 206
Query: 233 RRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYP 292
RRHLLTTGWS FV++K LVSGDAVLFLRG+DG LRLG+RR+ Q + P L Q S
Sbjct: 207 RRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGVLRLGVRRAAQLKIVTPIPALHNQCSSQ 266
Query: 293 NVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSP 352
L VA AV+T+++FH++Y+PR + ++F++PY K+ + + PI +G R +MR+E DD+
Sbjct: 267 TTLGNVAQAVATRTVFHIYYNPRLSQSEFIVPYWKFTRSLNQPISVGMRCRMRYESDDAS 326
Query: 353 ERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQ 412
ERRC G++ G + +P W SKW+CL+VRWD+ I +VSPWEI+ + S+ S
Sbjct: 327 ERRCTGIIIGSREAEPI-WYGSKWKCLVVRWDDGIECHWPNRVSPWEIEVTGSVSG-SHM 384
Query: 413 SSPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGF-------VSPL 465
+P K+L+ L P+ V G DF SVR KVLQGQE +G +S
Sbjct: 385 CAPNSKRLKPCLPQVNPEI-VLPNGSVSSDFAGSVRFHKVLQGQELLGLKTHDGTAISAF 443
Query: 466 YGCDTVNHPLGFEMRAPAHQSLALN--GIRKDNINELVRALPTSYTGFVESNRFPKVLQG 523
+ N E ++ L + G+R N + P +GF ES RF KVLQG
Sbjct: 444 QATEASNLQYSDERSNMSNNILGIPRLGVRSPN---GIPGFPYHCSGFGESQRFQKVLQG 500
Query: 524 QEICPLRSLTGK--VDLNLGTWG--KPNF----GCN------SMNMYQASKPN---IYPP 566
QE+ R G D ++ T G +P + GC+ + + QAS P+ ++P
Sbjct: 501 QEV--FRPFRGGCLADGHIRTAGMYQPKWPAPQGCDFPQPAKPVLVLQASSPSSVLMFPQ 558
Query: 567 PSESLSNMFFPYGDMPKTVQ---HHTMPPYASNLQRENVKLNSSSIQMPAIGAEIRKANL 623
++ + + Y + K T+P ++ R N L ++ +
Sbjct: 559 TGSKITPLEYEYSCLDKDEDGRFDRTVP--TQDMGRNNQTL--------SLWPHLVSGEA 608
Query: 624 LNEHKPVENIPTPTFKANMRSHKDGSFNGTAAGCKLFGFSLTSETPT--PSSQSPGKR-- 679
+ E EN+ + A S+ + + GCK+FG SL + + + KR
Sbjct: 609 IEECTGTENMHSSVSGAEHESNNESTVEN---GCKIFGISLAEKIRSCDEADSCSAKRNS 665
Query: 680 -----------SC-TKVHKQGSLVGRAIDL 697
SC VH+ S+VGR +D+
Sbjct: 666 GLQPSRSQILGSCWATVHEHRSVVGRVVDV 695
>gi|293334419|ref|NP_001170123.1| uncharacterized protein LOC100384045 [Zea mays]
gi|224033653|gb|ACN35902.1| unknown [Zea mays]
gi|295844298|gb|ADG43146.1| auxin response factor 12 [Zea mays]
gi|407232694|gb|AFT82689.1| ARF12 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|414881063|tpg|DAA58194.1| TPA: auxin response factor 12 [Zea mays]
Length = 708
Score = 449 bits (1154), Expect = e-123, Method: Compositional matrix adjust.
Identities = 287/695 (41%), Positives = 383/695 (55%), Gaps = 74/695 (10%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVV 115
++ ELWHACAGP+ LP+KG+ VVY PQGHLE + +A + P + C+VV
Sbjct: 30 AVCLELWHACAGPVPPLPRKGSAVVYLPQGHLEHIGGDAA---RGAAASAVPPHVLCRVV 86
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEA----KQLEDLGVDEEGGGRSPTKSTPHM 171
DV L A+ DEVY +V+LLP+ E +A ++ ED E+GG P TPHM
Sbjct: 87 DVTLHADGATDEVYARVSLLPEDEDAEKRAQAQARVREDEDRRDGEDGGAMRPLARTPHM 146
Query: 172 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQ 231
FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDY QQRPSQELVAKDLHG EW+FRHIYRGQ
Sbjct: 147 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKFRHIYRGQ 206
Query: 232 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSY 291
PRRHLLTTGWS FV++K L+SGDAVLFLRG+DG LRLG+RR+ Q + P Q S
Sbjct: 207 PRRHLLTTGWSAFVNRKKLISGDAVLFLRGEDGVLRLGVRRAAQLKIVTPIPAPHNQCSS 266
Query: 292 PNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDS 351
+ L VA AV+TK++FH++Y+PR T ++F++PY K+ + PI +G R +MR+E DD+
Sbjct: 267 NSNLGNVAQAVATKTVFHIYYNPRLTQSEFIVPYWKFTRSFNQPISVGMRCRMRYESDDA 326
Query: 352 PERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSI 411
ERRC G++ G + DP W SKW+CL+VRWD+ I +VSPWEI+ + S+ S
Sbjct: 327 SERRCTGIIIGSREADPI-WYGSKWKCLVVRWDDGIECRWPNRVSPWEIELTGSVSG-SQ 384
Query: 412 QSSPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTV 471
+P K+L+ L P+ V G DF S R KVLQGQE +GF T
Sbjct: 385 MCAPSSKRLKPCLPQVNPEI-VLPNGSVSSDFAGSARFHKVLQGQELLGF-------KTH 436
Query: 472 NHPLGFEMRAPAHQSLALNGIRKDNINELVR----------ALPTSYTGFVESNRFPKVL 521
+ P +A ++L + R +N + R P +GF ES RF KVL
Sbjct: 437 DGPAISASQATEARNLQYSDERSNNNLGIPRLGVRSPTGIPGFPYHCSGFGESQRFQKVL 496
Query: 522 QGQEIC-PLRSLTGKVDLNLGTWG--KPNFGCNSMNMYQASKPNIY--PPPSESL----- 571
QGQE+ P R D ++ T G +P+ S Y+ S P Y P P++ +
Sbjct: 497 QGQEVFHPFRGGC-LADGHIRTAGMYQPDGRHVSGAAYKWSAPQGYDFPQPAKPVFLLQE 555
Query: 572 ----SNMFFPYGDMPKTVQHHTMPPYASNLQRENVKLNSSSIQMPAIGAEIRKANLLNEH 627
S M FP ++ H Y+ + E+ +L+ ++ +G + +L
Sbjct: 556 SSPSSVMMFP---QTRSKITHLEYEYS---RHEDGRLD-RTVPTQDMGRSNQTLSLWPHL 608
Query: 628 KPVENIPTPTFKANMRS------HKDGSFNGTAAGCKLFGFSLTSET------------- 668
E I T NM S H+ + + GCK+FG SL +
Sbjct: 609 VSGEAIEECTGTVNMHSPVSGAEHESNNESTVENGCKIFGISLAEKIRSCDEADSCSAKC 668
Query: 669 -----PTPSSQSPGKRSC-TKVHKQGSLVGRAIDL 697
P S SC VH+Q +VGR +D+
Sbjct: 669 NSRLQPLKSQMPKSLGSCWATVHEQRPVVGRVVDV 703
>gi|224077042|ref|XP_002305105.1| predicted protein [Populus trichocarpa]
gi|222848069|gb|EEE85616.1| predicted protein [Populus trichocarpa]
Length = 709
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 244/488 (50%), Positives = 315/488 (64%), Gaps = 65/488 (13%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVD 116
+ ELWHACAGPL SLPK+G++VVY PQGHLEQ+ P + + +DL P +FC+VVD
Sbjct: 46 VCLELWHACAGPLISLPKRGSIVVYVPQGHLEQL------PDLPLGIYDLPPHVFCRVVD 99
Query: 117 VQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDL---GVDEEGGGRSPTKSTPHMFC 173
V+L A +D+VY QV+L+P+ E +E K E + +EE + +TPHMFC
Sbjct: 100 VKLHAEAASDDVYAQVSLVPESE----EIEQKLREGVFEGDGEEEDVEATVKTTTPHMFC 155
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
KTLTASDTSTHGGFSVPRRAAEDCFPPLDY QQRPSQELVAKDLHG EW+FRHIYRGQPR
Sbjct: 156 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYTQQRPSQELVAKDLHGSEWKFRHIYRGQPR 215
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
RHLLTTGWS FV++K LVSGDAVLFLRG+DGELRLG+RR+ Q + G L Q +
Sbjct: 216 RHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGVRRAAQVKCGPTFPALWNQQLNQS 275
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
L+ VANA+S +S F ++Y+PRA+ ++F+IP+ K++K + G R KMRFE +D+ E
Sbjct: 276 SLADVANAISMRSAFRIYYNPRASSSEFIIPFNKFLKSLDQSFSAGMRVKMRFETEDAAE 335
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID--------RSVS 405
RR G++TGI++LDP RWP SKW+CL+VRWD+ + H +VSPWE++ S S
Sbjct: 336 RRYTGLITGISELDPTRWPGSKWKCLLVRWDDTEANRH-SRVSPWEVEPSGSVSGSGSGS 394
Query: 406 LPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPL 465
+ + +P +K+ R+GL + ++P+ G G DF S R +VLQGQE
Sbjct: 395 ISSSNNSMAPGLKRSRSGLPSLKAEFPI-PDGIGASDFRVSSRFQEVLQGQE-------- 445
Query: 466 YGCDTVNHPLGFEMRAPAHQSLALNGIRKDNINELVRALPTSYT-----GFVESNRFPKV 520
+ +GIR ++PTS GF ES RF KV
Sbjct: 446 ---------------------IMRSGIRG--------SIPTSENSFKGIGFNESYRFHKV 476
Query: 521 LQGQEICP 528
LQGQEI P
Sbjct: 477 LQGQEIFP 484
>gi|218188818|gb|EEC71245.1| hypothetical protein OsI_03213 [Oryza sativa Indica Group]
Length = 714
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 282/707 (39%), Positives = 382/707 (54%), Gaps = 91/707 (12%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVV 115
++ ELWHACAGP+ LP+KG+ VVY PQGHLE + ++ + P +FC+VV
Sbjct: 35 AVCLELWHACAGPVAPLPRKGSAVVYLPQGHLEHLGAAPG----PAAVAAVPPHVFCRVV 90
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKT 175
DV L A+ DEVY QV+L+ E +E + E + E + P + PHMFCKT
Sbjct: 91 DVSLHADAATDEVYAQVSLVADNE----EVERRMREGEDGEGEDAVKRPAR-IPHMFCKT 145
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
LTASDTSTHGGFSVPRRAAEDCFPPLDY QRPSQELVAKDLHG EWRFRHIYRGQPRRH
Sbjct: 146 LTASDTSTHGGFSVPRRAAEDCFPPLDYSLQRPSQELVAKDLHGTEWRFRHIYRGQPRRH 205
Query: 236 LLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVL 295
LLTTGWS F+++K LVSGDAVLFLRG+DGELRLG+RR+ Q +N P L Q S + L
Sbjct: 206 LLTTGWSGFINKKKLVSGDAVLFLRGEDGELRLGVRRAAQLKNVSPFPALHNQISSTSSL 265
Query: 296 SVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERR 355
S VA+AV+ KS+FH++Y+PR + ++F+IPY K+++ P +G RFK+R+E +D+ ERR
Sbjct: 266 SEVAHAVAVKSIFHIYYNPRLSQSEFIIPYWKFMRSFSQPFSVGMRFKLRYESEDASERR 325
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSP 415
G++ G + DP W SKW+CL+V+WD+ + VSPWEI+ S S+ + S+P
Sbjct: 326 RTGIIIGSREADPM-WHGSKWKCLVVKWDDDVECRRPNGVSPWEIELSGSVSGSHL-STP 383
Query: 416 RMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHPL 475
K+L++ PD V G DF ES R KVLQGQE L G T + +
Sbjct: 384 HSKRLKSCFPQVNPDI-VLPNGSVSSDFAESARFHKVLQGQE-------LLGLKTRDGTV 435
Query: 476 GFEMRAPAHQSLALNGIRKDNIN---------ELVRALPT-----SY--TGFVESNRFPK 519
+A ++ R +IN L P+ SY +GF ES RF +
Sbjct: 436 NTASQATEARNFQYTDERSCSINMSNNILGVPRLGVKTPSGNPGFSYHCSGFGESQRFQE 495
Query: 520 VLQGQEIC-PLRSLT--------------------GKVDLNLGTWGKPNFGCNSMNMYQA 558
VLQGQE+ P R T G L G + G + + QA
Sbjct: 496 VLQGQEVFRPYRGGTLSDACIRGSGFRPPDGNHASGAAFKWLAPQGCDHHGITTSVLPQA 555
Query: 559 SKPN---IYPPPSESLSNMFFPYG--DMPKTVQHHTMPPYASNLQRENVKLNSSSIQMPA 613
S P+ ++P S + + + YG D + +H + P ++ R + L
Sbjct: 556 SSPSSVLMFPQTSSKMPGLEYIYGCLDRNENSRHFKIGP-TQDMARTDQTLR-------- 606
Query: 614 IGAEIRKANLLNEHKPVENIPTPTFKANMRSHKDGSFNGTAAGCKLFGFSLTSETPTPSS 673
+ + +L+E E + +P A S+ + N GCK+FG SLT +
Sbjct: 607 LWPHLISGKVLDECTRNEKLHSPVGGAEHESNTNKCLN--TNGCKIFGISLTEKAQAGDE 664
Query: 674 QSPGK-------------------RSCTKVHKQGSLVGRAIDLWRLN 701
G SC VH+Q +VGR +D+ +N
Sbjct: 665 VDCGNASYHSRLQSLKPQMPKSLGSSCATVHEQRPVVGRVVDISAVN 711
>gi|50511471|gb|AAT77393.1| putative ETTIN protein [Oryza sativa Japonica Group]
Length = 719
Score = 446 bits (1146), Expect = e-122, Method: Compositional matrix adjust.
Identities = 279/653 (42%), Positives = 380/653 (58%), Gaps = 42/653 (6%)
Query: 46 NSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFD 105
SS + + + ++ ELWHACAGP+ LP+KG VVVY PQGHLE + + A
Sbjct: 24 GSSPAPARAGAVCLELWHACAGPVAPLPRKGGVVVYLPQGHLEHLGDAPA---AAAAAAA 80
Query: 106 LQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPT 165
+ P +FC+VVDV LLA+ DEVY Q++L+P+ E A++ +D ++ G +
Sbjct: 81 VPPHVFCRVVDVTLLADAATDEVYAQLSLVPEKEEV-----ARRADDGEGEDGDGMKQRF 135
Query: 166 KSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFR 225
PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDY QQRPSQELVAKDLH EWRFR
Sbjct: 136 ARMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHSTEWRFR 195
Query: 226 HIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSIL 285
HIYRGQPRRHLLTTGWS FV++K LVSGDAVLFLRG DGELRLG+RR+ Q +NG L
Sbjct: 196 HIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKNGSAFPAL 255
Query: 286 SKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMR 345
Q S L+ VA+AV+T+S+F+++Y+PR + ++F++PY K++K + P +G RFKMR
Sbjct: 256 YNQCSNLGTLANVAHAVATESVFNIYYNPRLSQSEFIVPYWKFMKSLSQPFSVGLRFKMR 315
Query: 346 FEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS 405
+E +D+ ERR G++TG D DP W SKW+CL+VRWD+ +VSPWEI+ + S
Sbjct: 316 YESEDATERRYTGIITGSGDTDPM-WHGSKWKCLLVRWDDDAEFRRPNRVSPWEIELTSS 374
Query: 406 LPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPL 465
+ + S+P K+L+ L P+Y V RGGG DF ES + KVLQGQE +GF S
Sbjct: 375 VSGSHL-STPHSKRLKPCLPHVNPEYMV-PRGGGCPDFAESAQFHKVLQGQELLGFKSHG 432
Query: 466 YGCDTVNHP-----LGF--EMRAPAHQSLALNGIRKDNINELVRALPTSY--TGFVESNR 516
+ P L + E + S ++ G+ + + SY +GF ES+R
Sbjct: 433 GTAAATSQPCEARHLQYIDERSCSSDASNSILGVPRLGDRAPLGNPGFSYHCSGFGESHR 492
Query: 517 FPKVLQGQEICPLRSLTGK-VDLNLGTWG-----KPNFGCNSMNMYQA---SKPNIYPPP 567
KVLQGQE+ R G VD ++G+ G P +N +QA + + PP
Sbjct: 493 LQKVLQGQEL--FRPYRGTLVDASMGSNGFHQQDSPR-APGVVNKWQAQLHGRAAFHGPP 549
Query: 568 SESLSNMFFPYGDMPKTVQHHT-MPPYASNLQRENVKLNSSSIQM-PAIGAEIRKANLLN 625
+ +L + + Q ++ MP + + N ++ P+ G E R+ +
Sbjct: 550 ALALPSQSSSPPSVLMFQQANSKMPRLEFGHGQLDKHENDRRVRFGPSEGIERREQRIPL 609
Query: 626 EHKPVE------NIPTPTFKANMRSHKDGSFNGTAA--GCKLFGFSLTSETPT 670
+ P + + R KDG N CK+FG SLT + P
Sbjct: 610 QPYPTSGEVIDGQVTVEKSHSPGRHGKDGPDNKAVGTNSCKIFGISLTEKVPA 662
>gi|414881064|tpg|DAA58195.1| TPA: hypothetical protein ZEAMMB73_535248 [Zea mays]
Length = 698
Score = 445 bits (1144), Expect = e-122, Method: Compositional matrix adjust.
Identities = 276/646 (42%), Positives = 368/646 (56%), Gaps = 55/646 (8%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVV 115
++ ELWHACAGP+ LP+KG+ VVY PQGHLE + +A + P + C+VV
Sbjct: 30 AVCLELWHACAGPVPPLPRKGSAVVYLPQGHLEHIGGDAA---RGAAASAVPPHVLCRVV 86
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEA----KQLEDLGVDEEGGGRSPTKSTPHM 171
DV L A+ DEVY +V+LLP+ E +A ++ ED E+GG P TPHM
Sbjct: 87 DVTLHADGATDEVYARVSLLPEDEDAEKRAQAQARVREDEDRRDGEDGGAMRPLARTPHM 146
Query: 172 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQ 231
FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDY QQRPSQELVAKDLHG EW+FRHIYRGQ
Sbjct: 147 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGTEWKFRHIYRGQ 206
Query: 232 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSY 291
PRRHLLTTGWS FV++K L+SGDAVLFLRG+DG LRLG+RR+ Q + P Q S
Sbjct: 207 PRRHLLTTGWSAFVNRKKLISGDAVLFLRGEDGVLRLGVRRAAQLKIVTPIPAPHNQCSS 266
Query: 292 PNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDS 351
+ L VA AV+TK++FH++Y+PR T ++F++PY K+ + PI +G R +MR+E DD+
Sbjct: 267 NSNLGNVAQAVATKTVFHIYYNPRLTQSEFIVPYWKFTRSFNQPISVGMRCRMRYESDDA 326
Query: 352 PERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSI 411
ERRC G++ G + DP W SKW+CL+VRWD+ I +VSPWEI+ + S+ S
Sbjct: 327 SERRCTGIIIGSREADPI-WYGSKWKCLVVRWDDGIECRWPNRVSPWEIELTGSVSG-SQ 384
Query: 412 QSSPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTV 471
+P K+L+ L P+ V G DF S R KVLQGQE +GF T
Sbjct: 385 MCAPSSKRLKPCLPQVNPEI-VLPNGSVSSDFAGSARFHKVLQGQELLGF-------KTH 436
Query: 472 NHPLGFEMRAPAHQSLALNGIRKDNINELVR----------ALPTSYTGFVESNRFPKVL 521
+ P +A ++L + R +N + R P +GF ES RF KVL
Sbjct: 437 DGPAISASQATEARNLQYSDERSNNNLGIPRLGVRSPTGIPGFPYHCSGFGESQRFQKVL 496
Query: 522 QGQEIC-PLRSLTGKVDLNLGTWG--KPNFGCNSMNMYQASKPNIY--PPPSESL----- 571
QGQE+ P R D ++ T G +P+ S Y+ S P Y P P++ +
Sbjct: 497 QGQEVFHPFRGGC-LADGHIRTAGMYQPDGRHVSGAAYKWSAPQGYDFPQPAKPVFLLQE 555
Query: 572 ----SNMFFPYGDMPKTVQHHTMPPYASNLQRENVKLNSSSIQMPAIGAEIRKANLLNEH 627
S M FP ++ H Y+ + E+ +L+ ++ +G + +L
Sbjct: 556 SSPSSVMMFP---QTRSKITHLEYEYS---RHEDGRLD-RTVPTQDMGRSNQTLSLWPHL 608
Query: 628 KPVENIPTPTFKANMRS------HKDGSFNGTAAGCKLFGFSLTSE 667
E I T NM S H+ + + GCK+FG SL +
Sbjct: 609 VSGEAIEECTGTVNMHSPVSGAEHESNNESTVENGCKIFGISLAEK 654
>gi|357132570|ref|XP_003567902.1| PREDICTED: auxin response factor 15-like [Brachypodium distachyon]
Length = 730
Score = 443 bits (1139), Expect = e-121, Method: Compositional matrix adjust.
Identities = 287/702 (40%), Positives = 380/702 (54%), Gaps = 97/702 (13%)
Query: 55 SSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKV 114
S++ ELWHACAGP+ +P+KG+VVVYFPQGHLEQ+ +A N + P +FC+V
Sbjct: 63 SAVCLELWHACAGPVAPMPRKGSVVVYFPQGHLEQLGGDAA-----AANAPVPPHVFCRV 117
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
VDV L A+ DEVY Q++LLP+ E E G ++ G+ PHMFCK
Sbjct: 118 VDVSLHADASTDEVYAQLSLLPENEEAVRRKREGAEEGSGGEDGETGKQRFSRMPHMFCK 177
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLTASDTSTHGGFSVPRRAAEDCFPPLDY QQRPSQEL AKDLHG EW+FRHIYRGQPRR
Sbjct: 178 TLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELAAKDLHGTEWKFRHIYRGQPRR 237
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS FV++K LVSGDAVLFLRG DGELRLG+RR+ Q + G L Q S
Sbjct: 238 HLLTTGWSAFVNKKKLVSGDAVLFLRGDDGELRLGVRRAAQLKTGSAFPGLYSQCSNLGT 297
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
L+ VA+AV+TK MF ++Y+PR + ++F++PY K+ K + P +G RFKMR+E +D+ ER
Sbjct: 298 LANVAHAVATKGMFRIYYNPRLSQSEFIVPYWKFTKSLSQPFSVGLRFKMRYESEDAAER 357
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSS 414
R G++TG D DP W SKW+CL+VRWD+ + +VSPWEI+ + S + ++
Sbjct: 358 RYTGIITGTGDADPM-WRGSKWKCLLVRWDDDVECRRPNRVSPWEIELTSSASGSHL-AT 415
Query: 415 PRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGF-------VSPLYG 467
P K+L+ L P+Y V GGG DF ES + KVLQGQE +G+ V+
Sbjct: 416 PASKRLKPCLSHVNPEYMV-PHGGGRPDFVESAQFRKVLQGQELLGYRTHDGTAVATSRP 474
Query: 468 CDTVNHPLGFEMRAPAHQSLALNGIRKDNINELVR--ALPTSYTGFVESNRFPKVLQGQE 525
C+ N E ++ GI + P +GF ES RF KVLQGQE
Sbjct: 475 CEARNSQYIDERSCSNDVGNSVLGIPRLGARTPYGNPGFPYHCSGFRESQRFQKVLQGQE 534
Query: 526 IC-PLRSLTGKVDLNLGT-----------------WGKPNFGC----------NSMNMYQ 557
+ P R VD + + W GC S +
Sbjct: 535 VFHPYRG--SLVDARIRSSGIHQQDGPYAPGAANKWHSQLHGCAFRGPPAPVLPSQSASS 592
Query: 558 ASKPNIYPPPSESLSNMFFPYG--DMPKTVQHHTMPPYASNLQRENVKLNSSSIQM-PAI 614
++ + +S F +G DM + +H A E V ++ ++ + P +
Sbjct: 593 PPSVLMFQQANSKVSRFEFGHGHLDMNEDDRH------ARFDSTEGVGRSAQTLSLRPHL 646
Query: 615 GAEIRKANLLNEHKPVENIPTPTFKANMRSHKDGSFNGTAAGCKLFGFSLTSETPT---- 670
AE+ ++ E+K V GT + CK+FG SL +
Sbjct: 647 AAEVMDGHVAVENKSV---------------------GTNS-CKIFGISLAEKVRARDEM 684
Query: 671 -------PSSQSPGKR--------SCTKVHKQGSLVGRAIDL 697
PSS K+ SC VH+Q +VGRAID+
Sbjct: 685 GCGDANYPSSVQSLKQQVPKSLGSSCATVHEQRPVVGRAIDV 726
>gi|302190092|dbj|BAJ14105.1| auxin response factor 3 [Juncus prismatocarpus subsp.
leschenaultii]
Length = 550
Score = 439 bits (1129), Expect = e-120, Method: Compositional matrix adjust.
Identities = 258/504 (51%), Positives = 318/504 (63%), Gaps = 67/504 (13%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVA------SSSAFPPIEVPNFDLQPQ 109
++ ELWHACAGP+ SLPKKG+VVVYFPQGHLEQ+ S+ A PP
Sbjct: 20 AVNIELWHACAGPVVSLPKKGSVVVYFPQGHLEQIGCHFVGLSADALPP----------H 69
Query: 110 IFCKVVDVQLLANKENDEVYTQVALLPQPELE---GLNLEAKQLEDLGVDEEGGGRSPTK 166
+F +VV V L+A+ DEVY Q++L+P E E LN E + + EE PTK
Sbjct: 70 VFSRVVHVTLMADVGTDEVYAQLSLMPLSEEERQSHLNFEEEGDGEEKEREESDKLGPTK 129
Query: 167 STPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRH 226
PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRP+QELVAKDLHG EWRFRH
Sbjct: 130 -IPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPTQELVAKDLHGTEWRFRH 188
Query: 227 IYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILS 286
IYRGQPRRHLLTTGWS FV++K LVSGDAVLFLRG DGELRLGIRR+VQ ++ + +
Sbjct: 189 IYRGQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGIRRAVQLKS---TNFPA 245
Query: 287 KQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRF 346
QNS +S +A A+S KS+FH+ Y+PR ++F++PY K++K +PI IGTRFKM F
Sbjct: 246 IQNSN---ISNIAQAISKKSLFHICYNPRDGQSEFIVPYWKFMKSFNHPISIGTRFKMNF 302
Query: 347 EMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSL 406
E +D+ ERR NG++TGI+D+DP RWP SKWRCL+VRWDE Q +VSPWEI+ + ++
Sbjct: 303 ESEDASERRYNGLITGISDMDPLRWPGSKWRCLLVRWDENGECIRQNRVSPWEIELTGTV 362
Query: 407 PPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGGVLDF-EESVRSSKVLQGQE-NVGFVSP 464
+ +P K+L+ P P D+ E S R KVLQGQE ++GF SP
Sbjct: 363 SQGMM--APNSKRLK-------PCTPTITGNNNSSDYLEPSGRFQKVLQGQEMSLGFKSP 413
Query: 465 LYGCDTVNHPLGFEMRAPAHQSLALNGIRKDNINELVRALPTSYTGFVESNRFPKVLQGQ 524
R P + + TG S FPKVLQGQ
Sbjct: 414 WD-------------RIPITSTQPFCAVYT--------------TG--ASLGFPKVLQGQ 444
Query: 525 EICPLRSLTGKVDLNLGTWGKPNF 548
EI P + T L +GT P+F
Sbjct: 445 EILPPYNHTTTPPL-IGTIVPPDF 467
>gi|326523321|dbj|BAJ88701.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 697
Score = 437 bits (1125), Expect = e-120, Method: Compositional matrix adjust.
Identities = 271/648 (41%), Positives = 359/648 (55%), Gaps = 51/648 (7%)
Query: 54 SSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCK 113
+ ++ ELWHACAGP +LP++G+ VVY PQ HL A+ P + P + C+
Sbjct: 15 AGAVCGELWHACAGPGVALPRRGSAVVYLPQAHL---AAGGGDAPAPAGRAHVPPHVACR 71
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTK-STPHMF 172
VV V+L A+ DEVY ++AL+ + E+ ++ + E+ G DE G K PHMF
Sbjct: 72 VVGVELCADAATDEVYARLALVAEAEMFRQSVRERGSEE-GEDEMAAGDGENKPRMPHMF 130
Query: 173 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQP 232
CKTLTASDTSTHGGFSVPRRAAEDCF LDYKQ RPSQELVAKDLHG +WRFRHIYRGQP
Sbjct: 131 CKTLTASDTSTHGGFSVPRRAAEDCFAHLDYKQVRPSQELVAKDLHGTQWRFRHIYRGQP 190
Query: 233 RRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYP 292
RRHLLTTGWS FV++K LVSGDAVLFLRG DGELRLG+RR+VQ RN ++ +S
Sbjct: 191 RRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAVQLRNEALFEAVNTNDSKL 250
Query: 293 NVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSP 352
+ LS VA+++ +S+FHV + PR+ ++F++PY ++ K + + IG RFK+ E DD+
Sbjct: 251 HTLSAVASSLENRSIFHVCFDPRSGASEFIVPYWRFSKSLNHTFSIGMRFKVSNESDDAN 310
Query: 353 ERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDR---SVSLPPL 409
E R G+++GI+++DP RWP SKWRCLMVRWD+ +HQ +VSPWEI+R S+S+
Sbjct: 311 E-RSTGLISGISEVDPIRWPASKWRCLMVRWDDSTHCNHQRRVSPWEIERVGGSISVTDC 369
Query: 410 SIQSSPRMKKL---RTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLY 466
SS + KL + L AP D G G LD E+ +VLQGQE + S
Sbjct: 370 LSASSSKRAKLYFPQGNLDAPVTD------GNGCLDSMEAGNFHRVLQGQELL-MGSRTQ 422
Query: 467 GCDTVNHPLGFEMRAPAHQSLALNGIRKDNINELVRALPTSYTGFVESNRFPKVLQGQEI 526
G P R P H + N ++ I + P +GF ES RF +VLQGQE+
Sbjct: 423 GAGRSQSPDVARFRPPDHIRCSAN--VRNYIPQQSSEFPYHSSGFGESVRFSEVLQGQEM 480
Query: 527 C-PLRSLTGKV-DLNLGTWGKPNFGCNSMNMYQASKPNIYPPPSESLSNMFFPYGDMPKT 584
LR G D G FG A+ + P N F P
Sbjct: 481 SQALRFYQGSAFDARTQHGGAGPFG---YTQRSAAPIGLSPAAQGYPLNQFTPSAVGAAK 537
Query: 585 VQHHTMPPYASNLQRENVKLNS-SSIQMPAIGAEIRKANLLNEHK---PVENIPTPT--- 637
V + + L S +S + A G + R ++ E + P P+
Sbjct: 538 VSSPSSVLMFNQATVPQFDLESRTSSYIGAYGGQCRPMEMVRETEKTWPCAQRQRPSVTG 597
Query: 638 ---------FKANMRSHKDGSFNGTAAG---------CKLFGFSLTSE 667
KA+ + DGS G+AA C+LFGFSLT +
Sbjct: 598 TGCRRFEEWIKASTPASTDGSRPGSAAARDVVVGRSNCRLFGFSLTDQ 645
>gi|148910654|gb|ABR18397.1| unknown [Picea sitchensis]
Length = 920
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 244/448 (54%), Positives = 293/448 (65%), Gaps = 50/448 (11%)
Query: 55 SSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVA----------------------- 91
+S+ ELWHACAGPL SLP KG+ VVYFPQGHLEQ+A
Sbjct: 33 NSVCPELWHACAGPLISLPPKGSRVVYFPQGHLEQIADNELHKVGRGSFLNINQAVTPMA 92
Query: 92 ---SSSA---FPPIEVP--------NFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQ 137
SS+A PP + ++ L PQI C+V++V L A++E DEVY Q+ L+P
Sbjct: 93 EEASSAASLNIPPSSISQAVNQQMLSYKLPPQILCRVLNVNLHADQEMDEVYAQLTLVPD 152
Query: 138 PELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDC 197
E +E E L V P STPHMFCKTLTASDTSTHGGFSVPRRAAEDC
Sbjct: 153 SEKSEKCIE----EQLPV--------PPSSTPHMFCKTLTASDTSTHGGFSVPRRAAEDC 200
Query: 198 FPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVL 257
FPPLDY QQRPSQELVAKDLHG EWRFRHI+RGQPRRHLLTTGWS+FVS K LV+GDAVL
Sbjct: 201 FPPLDYSQQRPSQELVAKDLHGREWRFRHIFRGQPRRHLLTTGWSVFVSYKRLVAGDAVL 260
Query: 258 FLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRAT 317
FLR ++GELRLGIRR+ Q ++ +P S+LS + VL+ VA+AV+TKSMFH+FY+PR +
Sbjct: 261 FLRDENGELRLGIRRASQQQSSVPSSVLSSHGIHSGVLAAVAHAVATKSMFHIFYNPRTS 320
Query: 318 HADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWR 377
+FVIPY KYVK + IG RFKMRFE +D+ ERR G + GI D+DP RWPNS+WR
Sbjct: 321 PTEFVIPYHKYVKSFNHSFSIGMRFKMRFETEDATERRYTGTIVGIGDVDPMRWPNSEWR 380
Query: 378 CLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARG 437
V WDE + QE+VSPWEI+ S L+ PR+K+LRT P D + G
Sbjct: 381 SFKVGWDEHAAQERQERVSPWEIEPFTSATGLNALPGPRVKRLRTSFPTAPTDLSI-PDG 439
Query: 438 GGVLDFEESVRSSKVLQGQENVGFVSPL 465
+ DF ES R KVLQGQE +P
Sbjct: 440 DTLSDFGESSRFQKVLQGQEMSPLKTPF 467
Score = 164 bits (415), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/126 (64%), Positives = 96/126 (76%), Gaps = 3/126 (2%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDV 738
RSCTKVHKQG+ VGRA+DL +L GY++L+ ELEHLFNMEGLL P KGW I+YTD+E D+
Sbjct: 792 RSCTKVHKQGNAVGRAVDLSKLRGYDELIRELEHLFNMEGLLSTPEKGWHIVYTDNEGDI 851
Query: 739 MVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGT-TDDTQSCLDQAPVIMEVSVSKSSSVS 797
M+VGDDPW EFCN V KI I TQEEV+KMT G ++D QSC +Q P +E VSK S
Sbjct: 852 MLVGDDPWQEFCNIVCKILICTQEEVQKMTPGMFSEDAQSCFEQQPTTVE--VSKCSIDG 909
Query: 798 QPDSSP 803
Q SSP
Sbjct: 910 QDSSSP 915
>gi|301793235|emb|CBA12008.1| putative auxin response factor 3/4 [Pinus pinaster]
Length = 919
Score = 436 bits (1121), Expect = e-119, Method: Compositional matrix adjust.
Identities = 240/448 (53%), Positives = 291/448 (64%), Gaps = 50/448 (11%)
Query: 55 SSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSA------------------- 95
SS+ ELWHACAGPL SLP KG+ VVYFPQGHLEQ+A +
Sbjct: 33 SSVCPELWHACAGPLISLPPKGSRVVYFPQGHLEQIADNELHRGGRGSFLNVNHAAAPMA 92
Query: 96 ----------FPPIEVP--------NFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQ 137
PP + ++ L PQI C+V++V L A++E DEVY Q+ L+P
Sbjct: 93 EEASSAAALNIPPSSISQAVNQQMLSYKLPPQILCRVLNVNLHADQEMDEVYAQLTLVPD 152
Query: 138 PELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDC 197
E +E E L V P STPHMFCKTLTASDTSTHGGFSVPRRAAEDC
Sbjct: 153 SEKNEKCME----EQLSV--------PPSSTPHMFCKTLTASDTSTHGGFSVPRRAAEDC 200
Query: 198 FPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVL 257
FPPLDY QQRPSQELVAKDLHG EWRFRHI+RGQPRRHLLTTGWS+FVS K LV+GDAVL
Sbjct: 201 FPPLDYSQQRPSQELVAKDLHGREWRFRHIFRGQPRRHLLTTGWSVFVSYKRLVAGDAVL 260
Query: 258 FLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRAT 317
FLR ++GELRLGIRR+ Q ++ +P S+LS + VL+ VA+AV+TKSMFH++Y+PR +
Sbjct: 261 FLRDENGELRLGIRRASQQQSSVPSSVLSSHGIHSGVLAAVAHAVATKSMFHIYYNPRTS 320
Query: 318 HADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWR 377
+FVIPY KYVK + IG RFKMRFE +D+ ERR G + GI D+DP RWPNS+WR
Sbjct: 321 PTEFVIPYHKYVKSFNHSFSIGMRFKMRFETEDATERRYTGTIVGIGDVDPMRWPNSRWR 380
Query: 378 CLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARG 437
V WDE + Q++VSPWEI+ S L+ PR+K+LRT + P D + G
Sbjct: 381 SFKVGWDEHAAQERQDRVSPWEIEPFTSATGLNALPGPRVKRLRTSFPSAPTDLSI-PDG 439
Query: 438 GGVLDFEESVRSSKVLQGQENVGFVSPL 465
+ DF ES R KVLQGQE +P
Sbjct: 440 DTLSDFGESSRFQKVLQGQEMSPLKTPF 467
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 80/126 (63%), Positives = 96/126 (76%), Gaps = 3/126 (2%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDV 738
RSCTKVHKQG+ VGRA+DL +L GY++L+ ELEHLFNMEGLL P KGW I+YTD+E D+
Sbjct: 791 RSCTKVHKQGNAVGRAVDLSKLRGYDELIRELEHLFNMEGLLSTPEKGWHIVYTDNEGDI 850
Query: 739 MVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGT-TDDTQSCLDQAPVIMEVSVSKSSSVS 797
M+VGDDPW EFCN V KI I TQEEV+KMT G ++D Q+C +Q P +E VSK S
Sbjct: 851 MLVGDDPWQEFCNIVCKILICTQEEVQKMTPGMFSEDAQTCFEQQPTTVE--VSKCSIDG 908
Query: 798 QPDSSP 803
Q SSP
Sbjct: 909 QDSSSP 914
>gi|297826861|ref|XP_002881313.1| auxin response transcription factor 3 [Arabidopsis lyrata subsp.
lyrata]
gi|297327152|gb|EFH57572.1| auxin response transcription factor 3 [Arabidopsis lyrata subsp.
lyrata]
Length = 588
Score = 431 bits (1107), Expect = e-117, Method: Compositional matrix adjust.
Identities = 238/480 (49%), Positives = 297/480 (61%), Gaps = 63/480 (13%)
Query: 59 FELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQ 118
ELWHACAGPL SLPK+G++V+YFPQGHLEQ P + L P +FC+++DV+
Sbjct: 51 LELWHACAGPLISLPKRGSLVLYFPQGHLEQA------PDFSAAIYGLPPHVFCRILDVK 104
Query: 119 LLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRS----PTKSTPHMFCK 174
L A DEVY QV+LLP+ E ++E K E + +D +GG +TPHMFCK
Sbjct: 105 LHAETTTDEVYAQVSLLPESE----DIERKVREGI-IDVDGGEEDYEVLKRSNTPHMFCK 159
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLTASDTSTHGGFSVPRRAAEDCFPPLDY Q RPSQEL+A+DLHG+EWRFRHIYRGQPRR
Sbjct: 160 TLTASDTSTHGGFSVPRRAAEDCFPPLDYSQPRPSQELLARDLHGLEWRFRHIYRGQPRR 219
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS FV++K LVSGDAVLFLRG DG+LRLG+RR+ Q L P
Sbjct: 220 HLLTTGWSAFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQIEGTL----------MPYR 269
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
V + +T + A+ ++F+IP K++KI+ P CIG RFK R E +D+ ER
Sbjct: 270 PIVFSAFTTTNHNW-------ASWSNFIIPAPKFLKIVDYPFCIGMRFKARVESEDASER 322
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSS 414
R G++TGI+DLDP RWP SKWRCL+VRWD+ + HQ++VSPWEI+ S S+ +
Sbjct: 323 RSPGIITGISDLDPIRWPGSKWRCLLVRWDDIEANGHQQRVSPWEIEPSGSISNSGSFVT 382
Query: 415 PRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENV-GFVSPLYGCDTVNH 473
K+ R G + PD PVS G DFEES+R +VLQGQE GF++
Sbjct: 383 TGPKRSRIGFSSGKPDIPVS-EGIRATDFEESLRFQRVLQGQEIFPGFINTC-------- 433
Query: 474 PLGFEMRAPAHQSLALNGIRKDNINELVRALPTSYTGFVESNRFPKVLQGQEICPLRSLT 533
S G R+ T F +S F KVLQGQE P ++T
Sbjct: 434 ------------SDGGAGARRGRFKG---------TEFGDSYGFHKVLQGQETVPAYAIT 472
>gi|222619803|gb|EEE55935.1| hypothetical protein OsJ_04626 [Oryza sativa Japonica Group]
Length = 856
Score = 430 bits (1106), Expect = e-117, Method: Compositional matrix adjust.
Identities = 278/787 (35%), Positives = 415/787 (52%), Gaps = 89/787 (11%)
Query: 51 SSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQ 109
SS +Y ELWHACAGPL ++P+ G++V YFPQGH+EQV AS + ++ +DL +
Sbjct: 10 SSTGDPLYDELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADSQMRLYDLPSK 69
Query: 110 IFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPT-KST 168
+ C+V++V+L A ++ DEVY QV L+P+PE + +E V G P+ + +
Sbjct: 70 LLCRVLNVELKAEQDTDEVYAQVMLMPEPEQNEMAVEKTTPTSGPVQARPPGEGPSARRS 129
Query: 169 PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIY 228
P + AS S S P D Q P+QELVAKDLH ++WRFRHI+
Sbjct: 130 PRLTPARTAASLYSAATLMSA-------SLPWYDMTQSPPTQELVAKDLHSMDWRFRHIF 182
Query: 229 RGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQ 288
RGQPRRHLL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++ + +P S++S Q
Sbjct: 183 RGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVISSQ 242
Query: 289 NSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEM 348
+ + VL+ +A++TKSMF V+Y PR + ++F+IPY +Y++ + N +G RF+MRFE
Sbjct: 243 SMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSVGMRFRMRFEG 302
Query: 349 DDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPP 408
+++PE+R G + G +LDP WP S WR L VRWDE ++VSPW+I+ S PP
Sbjct: 303 EEAPEQRFTGTIIGSENLDPV-WPESSWRSLKVRWDEPSTIPRPDRVSPWKIE-PASSPP 360
Query: 409 LSIQSSPRMKKLRTGLQAPPPDYPVSARGGGV---LDFEESVRS--SKVLQGQENVGFVS 463
++ R+K+ R P+ P+ + D ++ RS S VLQGQE + S
Sbjct: 361 VNPLPLSRVKRPRPNAPPASPESPILTKEAATKVDTDPAQAQRSQNSTVLQGQEQMTLRS 420
Query: 464 PLYGCDTVN------------------HPLGFEMRAPAHQSLALNGIRKDNINELVRALP 505
L + + HPL F+ R P + L G R+ + + VR+
Sbjct: 421 NLTESNDSDVTAHKPMMWSPSPNAAKAHPLTFQQRPPMDNWMQL-GRRETDFKD-VRSGS 478
Query: 506 TSY---TGFVESN---------RFPKVLQGQ-----------EICPLRSLTGKVDLNLGT 542
S+ GF N F Q Q + P SLT + + T
Sbjct: 479 QSFGDSPGFFMQNFDEAPNRLTSFKNQFQDQGSARHFSDPYYYVSPQPSLTVESSTQMHT 538
Query: 543 WGKP-NFGCNSMNMYQASKPN----IYPPPSESLSNMFFPYGDMPKTVQ-HHTMPP---- 592
K +F +Y S+ + S S N F + P+ ++ H ++ P
Sbjct: 539 DSKELHFWNGQSTVYGNSRDRPQNFRFEQNSSSWLNQSFARPEQPRVIRPHASIAPVELE 598
Query: 593 ---------YASNLQRENVKLNSSSIQMPAIGAE-IRKANLLNEHKPVENIPTPTFKANM 642
+ + N N S M A ++ + LN+ +PV+ P
Sbjct: 599 KTEGSGFKIFGFKVDTTNAPNNHLSSPMAATHEPMLQTPSSLNQLQPVQTDCIPEVSV-- 656
Query: 643 RSHKDGSFNGTAAGCKLFG--FSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRL 700
S GTA + G +S+ +Q RSCTKVHKQG +GR++DL +
Sbjct: 657 ------STAGTATENEKSGQQAQQSSKDVQSKTQVASTRSCTKVHKQGVALGRSVDLSKF 710
Query: 701 NGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYT 760
+ Y++L +EL+ +F +G L K W+I+YTD+E D+M+VGDDPW EFC+ V KI+IYT
Sbjct: 711 SNYDELKAELDKMFEFDGELVSSNKNWQIVYTDNEGDMMLVGDDPWEEFCSIVRKIYIYT 770
Query: 761 QEEVEKM 767
+EEV+KM
Sbjct: 771 KEEVQKM 777
>gi|36939187|gb|AAQ86958.1| ETTIN-like auxin response factor [Triticum aestivum]
Length = 645
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 273/665 (41%), Positives = 363/665 (54%), Gaps = 70/665 (10%)
Query: 79 VVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQP 138
VVY PQGHL+ + + A + P +FC+VVDV L A+ DEVY Q++LLP+
Sbjct: 1 VVYLPQGHLDHLGDAPA-----PSPAAVPPHVFCRVVDVTLHADASTDEVYAQLSLLPEN 55
Query: 139 ELEGLNLEAKQLEDLGVDEEGGG-RSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDC 197
E E + + ED E+G + PHMFCKTLTASDTSTHGGFSVPRRAAEDC
Sbjct: 56 E-EVVRRMREATEDGSGGEDGETVKQRFARMPHMFCKTLTASDTSTHGGFSVPRRAAEDC 114
Query: 198 FPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVL 257
FPPLDY QQRP QELVAKDLHG EW+FRHIYRGQPRRHLLTTGWS FV++K LVSGDAVL
Sbjct: 115 FPPLDYSQQRPCQELVAKDLHGTEWKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVL 174
Query: 258 FLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRAT 317
FLRG DGELRLG+RR+VQ +NG L Q S L+ VA+AV+TKSMF +FY+PR +
Sbjct: 175 FLRGDDGELRLGVRRAVQLKNGSAFPALYSQCSNLGTLANVAHAVATKSMFQIFYNPRLS 234
Query: 318 HADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWR 377
++F++PY K+ K P +G+RFKMR+E +D+ ERR G++TG D DP W SKW+
Sbjct: 235 QSEFIVPYWKFTKSFSQPFSVGSRFKMRYESEDAAERRYTGIITGTGDADPM-WRGSKWK 293
Query: 378 CLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARG 437
CL+VRWD+ +VSPWEI+ + S + ++P K+++ L P++ V G
Sbjct: 294 CLLVRWDDDGEFRRPNRVSPWEIELTSSASGSHL-AAPTSKRMKPYLPHANPEFTV-PHG 351
Query: 438 GGVLDFEESVRSSKVLQGQENVGF-------VSPLYGCDTVNHPLGFEMRAPAHQS-LAL 489
GG DF ES + KVLQGQE +G+ V+ C+ N E + S L
Sbjct: 352 GGRPDFAESAQVRKVLQGQELLGYRTHDGTAVATSQPCEARNLQYIDERGCSNNGSNNVL 411
Query: 490 NGIRKDNINELVRALPTSYTGFVESNRFPKVLQGQEIC-PLRSLTGKVDLNLGTWGKPN- 547
G+ + + +P +GF ES RF KVLQGQE+ P R + G + + +
Sbjct: 412 GGVPSHGVKTPL-GIPYHCSGFGESQRFQKVLQGQEVFRPYRGSLVDARMRSGGFHQQDG 470
Query: 548 -----------------FGCNS---------------MNMYQASKPNIYPPPSESLSNMF 575
FG S + M+Q + P + S
Sbjct: 471 PYASALLDKWRTQQQHAFGFGSSAPVLPSQPSLSPPSVLMFQQADPKV--------SRFE 522
Query: 576 FPYGDMPKTVQHHTMPPYASNLQRENVKLNSSSIQM-PAIGAEIRKANLLNEHKPVENIP 634
F G + K + PYA + E + ++ + P +G+E+ + E+K V P
Sbjct: 523 FGQGHLDKNMDD----PYARFVSAEAIGRGEQTLSLRPHLGSEVIDTRVAVENKGV--AP 576
Query: 635 TPTFKANMRSHKDGSFNGTAAGCKLFGFSLTSETPTPSSQSPGK--RSCTKVHKQGSLVG 692
T + K S + GC G + S T Q P SC VH+Q +VG
Sbjct: 577 TNSCKIFGISLAEKVRARDEMGCDDGGANYPSSTQPLKQQVPKSLGNSCATVHEQRPVVG 636
Query: 693 RAIDL 697
RAID+
Sbjct: 637 RAIDV 641
>gi|357135881|ref|XP_003569536.1| PREDICTED: auxin response factor 2-like [Brachypodium distachyon]
Length = 697
Score = 425 bits (1092), Expect = e-116, Method: Compositional matrix adjust.
Identities = 284/708 (40%), Positives = 373/708 (52%), Gaps = 109/708 (15%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVV 115
++ ELWHACAGP+ LP+KG+ VVY PQGHLE + + + +VP P +FC+VV
Sbjct: 26 AVCLELWHACAGPVGPLPRKGSAVVYLPQGHLEHIGDAGS-AAAKVP-----PHVFCRVV 79
Query: 116 DVQLLANKENDEVYTQVALLPQPE------LEGLNLEAKQLEDLGVDEEGGGRSPTKSTP 169
DV L A+ DEVY QV L E +G N EA+ + G D + R P P
Sbjct: 80 DVNLQADAATDEVYAQVTLAVDNEESKRRVRDGENEEARDGD--GEDADAMKRLPR--IP 135
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDY RPSQELVAKDLHG EWRFRHIYR
Sbjct: 136 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSLPRPSQELVAKDLHGTEWRFRHIYR 195
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQN 289
GQPRRHLLTTGWS FV++K LVSGDAVLFLRG+DGELRLG+RR Q +N P Q+
Sbjct: 196 GQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGELRLGVRRVAQLKNVSPFPAPHNQD 255
Query: 290 SYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMD 349
+ L VA+A++ KS FHV+Y+PR ++F+IPY K+++ + P G RFKMR+E +
Sbjct: 256 PGHSSLGNVAHALAVKSTFHVYYNPRLCQSEFIIPYWKFMRSVGQPFSAGMRFKMRYENE 315
Query: 350 DSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID--RSVSLP 407
D+ ERR G++ G + DP + SKW+CL+VRWD+ I +VSPW+I+ +VS
Sbjct: 316 DASERRSTGIIIGSRESDPKSY-GSKWKCLVVRWDDDIEGRRPNRVSPWDIELTGAVSGS 374
Query: 408 PLSIQSSPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVS---P 464
LSI S RMK L PD + + G DF ES R KVLQGQE +GF +
Sbjct: 375 HLSIHHSKRMKPC---LPQVNPDMLLPS-GSVSSDFAESARFHKVLQGQELLGFKTHEGT 430
Query: 465 LYGCDTVNHPLGFEMRAPAHQSLALNGIRKDNINELVRALPT-----SY--TGFVESNRF 517
+ + F+ +S ++N + L P SY +GF ES RF
Sbjct: 431 VSASSQASEARSFQYT--DERSCSINMSNVAGVPRLGAGTPPGNHGFSYHCSGFGESQRF 488
Query: 518 PKVLQGQEIC-PLRSLTGKVDLNLGT----------------WGKPNFGCNSMN----MY 556
KVLQGQE+ P R T + G+ W P GC+ M
Sbjct: 489 QKVLQGQEVFRPYRGGTLSDAVIRGSGFCQRDGNHASGATYKWLAPQ-GCDYHGPTPAMP 547
Query: 557 QASKPN---IYPPPSESLSNMFFPYGDMPKTVQHHTMPPYASNLQRENVKLNSS-----S 608
QAS P+ ++P S + + + Y + K EN+ LN + +
Sbjct: 548 QASSPSSVLMFPQISSKIPSFEYVYRSLDKD---------------ENISLNPTQGMGRT 592
Query: 609 IQMPAIGAEIRKANLLNEHKPVENIPTPTFKANMRSHKDGSFNGTAAGCKLFGFSLTSE- 667
+ + + +++E E + TP D CK+FG SLT +
Sbjct: 593 NRTLPLWPHLVSGKVIDECTGSEKLQTP----------DKGPEHEPNVCKIFGISLTQKV 642
Query: 668 ------------------TPTPSSQSPGKRSCTKVHKQGSLVGRAIDL 697
+ P + SC VH+Q VG +D+
Sbjct: 643 QAGDEVDCGNGNYSSRHLSSKPQMPKSLRNSCATVHEQRPAVGMVVDV 690
>gi|218189070|gb|EEC71497.1| hypothetical protein OsI_03771 [Oryza sativa Indica Group]
Length = 674
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 275/661 (41%), Positives = 364/661 (55%), Gaps = 44/661 (6%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAGP+ SLP++G+ VVY PQGHL + EV L P + C+VVDV+L
Sbjct: 25 DLWHACAGPVVSLPRRGSAVVYLPQGHLSAAGAGGRIRG-EVA-VALPPHVACRVVDVEL 82
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
A+ DEVY ++AL + E+ NL +E E+G ++ HMFCKTLTAS
Sbjct: 83 CADAATDEVYARLALRAEGEVFERNLHGGGIEREDDMEDGDEERKSRML-HMFCKTLTAS 141
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
DTSTHGGFSVPRRAAEDCFPPLD+KQ RPSQELVAKDLHG +WRFRHIYRGQPRRHLLTT
Sbjct: 142 DTSTHGGFSVPRRAAEDCFPPLDHKQLRPSQELVAKDLHGAKWRFRHIYRGQPRRHLLTT 201
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVA 299
GWS FV++K LVSGDAVLFLRG DGELRLG+RR+ Q +N S ++S LS VA
Sbjct: 202 GWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRATQLKNEAIFKAFSSESSKMRTLSAVA 261
Query: 300 NAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCNGV 359
+++ S+FH+ Y+PRAT +++V+PY K+VK +P+CIG RFK +E +D ERR +G+
Sbjct: 262 DSLKHGSVFHICYNPRATASEYVVPYWKFVKSFNHPVCIGMRFKFHYESEDVNERR-SGM 320
Query: 360 VTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID---RSVSLP-PLSIQSSP 415
+ G++++DP RWP SKWR L+VRW++ + Q +VSPWEI+ S+S+ LS SS
Sbjct: 321 IAGVSEVDPIRWPGSKWRSLLVRWEDATDCNSQNRVSPWEIEIVGGSISVAHSLSASSSK 380
Query: 416 RMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHPL 475
R K G P Y G G D E+ + +VLQGQE +G + C + +
Sbjct: 381 RTKLCPQGNLDVPALY-----GNGRPDSVETEKFPRVLQGQELMGSRTHRVTCSPQSIDI 435
Query: 476 GFEMRAPAHQSLALNGIRKDNINELVRALPTSYTG-------FVESNRFPKVLQGQEIC- 527
A + L R + LP Y+G F ES FP+VLQGQEI
Sbjct: 436 TKSKSFDAWR--FLTDTRSCMLGSSTSRLPVQYSGYTHQSVSFGESIGFPEVLQGQEISQ 493
Query: 528 ---PLRSLTGKVDLNLGTWGKPNFGCNSMNMYQASKPNIYPPPSESLSNMFFPYGDMPKT 584
P++ + + N+ C M S N LS P
Sbjct: 494 TVPPIQGMLPDACSAKSRYELKNYVCTPATMNGLSSAN----EGYCLSLSTVPPSPPSSL 549
Query: 585 VQHHTMPPYASNLQRENVKLNSSSIQMPAIGAEIRKANLLNEHKPVE-NIPTPTFKANMR 643
+ + T P + N K + S PA +R+ LL+E + I + N
Sbjct: 550 MLYQTGVPQLELASKNNDKSGNDS--QPA----LRQHKLLSETSWDQFKIGKASTPGNAT 603
Query: 644 SHKDGSFNGTAAGCKLFGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGY 703
+G C+LFGFSLT E P+ + K + Q R +DL+ GY
Sbjct: 604 KPGNGGREVDRTSCRLFGFSLT-EKIIPTDKDGEKEVSYETDCQNP---RMLDLF---GY 656
Query: 704 N 704
N
Sbjct: 657 N 657
>gi|326499428|dbj|BAJ86025.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 648
Score = 422 bits (1085), Expect = e-115, Method: Compositional matrix adjust.
Identities = 244/536 (45%), Positives = 326/536 (60%), Gaps = 38/536 (7%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAGP+ +LP++G+ +VY PQ HL P L P + C+VVDV+L
Sbjct: 23 DLWHACAGPVVALPRRGSALVYLPQAHLAAAGGGGDAP------VGLPPHVACRVVDVEL 76
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
A+ DEVY ++AL+ + E+ N+ + E E+ G ++ HMFCKTLTAS
Sbjct: 77 CADPATDEVYARLALVAEGEVFEKNMGGGRFEGEDDMEDVDGERKSRML-HMFCKTLTAS 135
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
DTSTHGGFSVPRRAAEDCFPPLDY+Q RPSQELVAKDLHG +WRFRHIYRGQPRRHLLTT
Sbjct: 136 DTSTHGGFSVPRRAAEDCFPPLDYQQIRPSQELVAKDLHGAKWRFRHIYRGQPRRHLLTT 195
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVA 299
GWS FV++K LVSGDAVLFLRG DGELRLG+RR++Q +N + +S + LS V
Sbjct: 196 GWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALLKAFNSNSSKIHTLSAVV 255
Query: 300 NAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCNGV 359
N++ +S+FH+ Y+PRA ++F++PY K++K + P CIG RFK+++ +D ERR +G+
Sbjct: 256 NSLKHRSVFHICYNPRAAASEFIVPYWKFLKSLNRPFCIGMRFKIQYGSEDVNERR-SGM 314
Query: 360 VTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID---RSVSLP-PLSIQSSP 415
+TGI ++DP RW SKW+ L+VRW++ I + Q ++SPWEI+ SVS+ LS SS
Sbjct: 315 ITGINEVDPIRWTGSKWKSLLVRWEDGIDCNSQNRLSPWEIEIVGGSVSIAQSLSASSSK 374
Query: 416 RMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHPL 475
R K G P Y G G D + + +VLQGQE +G + C P
Sbjct: 375 RTKLCPQGNLDVPTLY-----GNGRPDSVGADKLPRVLQGQELMGSGTHRVTCPP--QPG 427
Query: 476 GFEMRAPAHQSLALNGIRKDNINELVRALP--TSY-----TGFVESNRFPKVLQGQEIC- 527
G + + L R ++ LP +SY GF ES RFP+VLQGQE+C
Sbjct: 428 GATEFRRSDGAGFLTDTRSCMLSGPASRLPPQSSYFAYQPVGFGESVRFPEVLQGQEVCQ 487
Query: 528 --PL-RSLTGKVDLNLGTWGKPNFGCNS--MNMYQASKPNIY------PPPSESLS 572
PL + + G +G N+ C S MN +S Y PPP+E+ S
Sbjct: 488 TVPLFQGMVSDTCSTKGGYGLYNYMCTSSAMNGGLSSAAQGYPLSLATPPPAEAAS 543
>gi|115439989|ref|NP_001044274.1| Os01g0753500 [Oryza sativa Japonica Group]
gi|75106370|sp|Q5JMM1.1|ARFC_ORYSJ RecName: Full=Auxin response factor 3
gi|57899614|dbj|BAD87193.1| putative ETTIN protein [Oryza sativa Japonica Group]
gi|57900329|dbj|BAD87282.1| putative ETTIN protein [Oryza sativa Japonica Group]
gi|113533805|dbj|BAF06188.1| Os01g0753500 [Oryza sativa Japonica Group]
gi|215701503|dbj|BAG92927.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 731
Score = 420 bits (1080), Expect = e-114, Method: Compositional matrix adjust.
Identities = 266/624 (42%), Positives = 349/624 (55%), Gaps = 37/624 (5%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAGP+ SLP++G+ VVY PQGHL + EV L P + C+VVDV+L
Sbjct: 82 DLWHACAGPVVSLPRRGSAVVYLPQGHLSAAGAGGGIRG-EVA-VALPPHVACRVVDVEL 139
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
A+ DEVY ++AL + E+ NL +E E+G ++ HMFCKTLTAS
Sbjct: 140 CADAATDEVYARLALRAEGEVFERNLHGGGIEREDDMEDGDEERKSRML-HMFCKTLTAS 198
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
DTSTHGGFSVPRRAAEDCFPPLD+KQ RPSQELVAKDLHG +WRFRHIYRGQPRRHLLTT
Sbjct: 199 DTSTHGGFSVPRRAAEDCFPPLDHKQLRPSQELVAKDLHGAKWRFRHIYRGQPRRHLLTT 258
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVA 299
GWS FV++K LVSGDAVLFLRG DGELRLG+RR+ Q +N S ++S LS VA
Sbjct: 259 GWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRATQLKNEAIFKAFSSESSKMRTLSAVA 318
Query: 300 NAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCNGV 359
+++ S+FH+ Y+PRAT +++V+PY K+VK +P+CIG RFK FE +D ERR +G+
Sbjct: 319 DSLKHGSVFHICYNPRATASEYVVPYWKFVKSFNHPVCIGMRFKFHFESEDVNERR-SGM 377
Query: 360 VTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID---RSVSLP-PLSIQSSP 415
+ G++++DP RWP SKWR L+VRW++ + Q +VSPWEI+ S+S+ LS SS
Sbjct: 378 IAGVSEVDPIRWPGSKWRSLLVRWEDATDCNSQNRVSPWEIEIVGGSISVAHSLSASSSK 437
Query: 416 RMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHPL 475
R K G P Y G G D E+ + +VLQGQE +G + C + +
Sbjct: 438 RTKLCPQGNLDVPALY-----GNGRPDSVETEKFPRVLQGQELMGSRTHRATCSPQSIDI 492
Query: 476 GFEMRAPAHQSLALNGIRKDNINELVRALPTSYTG-------FVESNRFPKVLQGQEIC- 527
A + L R + LP Y+G F ES FP+VLQGQEI
Sbjct: 493 TKSKSFDAWR--FLTDTRSCMLGSSTSRLPVQYSGYTHQSVSFGESIGFPEVLQGQEISQ 550
Query: 528 ---PLRSLTGKVDLNLGTWGKPNFGCNSMNMYQASKPNIYPPPSESLSNMFFPYGDMPKT 584
P + + + N+ C M S N LS P
Sbjct: 551 TVPPFQGMLPDACSAKSRYELKNYVCTPATMNGLSSAN----EGYCLSLSTVPPSPPSSL 606
Query: 585 VQHHTMPPYASNLQRENVKLNSSSIQMPAIGAEIRKANLLNEHKPVE-NIPTPTFKANMR 643
+ + T P + N K + S PA +R+ LL+E + I + N
Sbjct: 607 MLYQTGVPQLELASKNNDKSGNDS--QPA----LRQHKLLSETSWDQFKIGKASTPGNAT 660
Query: 644 SHKDGSFNGTAAGCKLFGFSLTSE 667
+G C+LFGFSLT +
Sbjct: 661 KPGNGGREVDRTSCRLFGFSLTEK 684
>gi|301793205|emb|CBA11993.1| putative auxin response factor 2 [Amborella trichopoda]
Length = 737
Score = 417 bits (1073), Expect = e-114, Method: Compositional matrix adjust.
Identities = 217/461 (47%), Positives = 293/461 (63%), Gaps = 21/461 (4%)
Query: 21 GDCGKNNSGCVCYLNSSSSSSSCSANSSSSSS----LSSSIYFELWHACAGPLTSLPKKG 76
G CG+ G +N SS S SS S+ + +Y ELWHACAGPL S+P+ G
Sbjct: 2 GSCGEGLKGLCPRVNGSSGGDGLSNVSSEPSAGFRDANDGLYTELWHACAGPLVSVPQMG 61
Query: 77 NVVVYFPQGHLEQVASSS---AFPPIEVPNFDLQPQIFCKVVDVQLLANKENDEVYTQVA 133
+ V YFPQGH EQV S+ A P+ PN+DL +I C+VV+V L A + DEVY Q+
Sbjct: 62 DKVFYFPQGHTEQVEKSTNQGADQPM--PNYDLPSKILCRVVNVWLKAEPDTDEVYAQLT 119
Query: 134 LLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRA 193
L+P+P + LE + ++ P + + FCKTLTASDTSTHGGFSV RR
Sbjct: 120 LIPEPNQDETTLEKETVQS----------PPRRPHVYSFCKTLTASDTSTHGGFSVLRRH 169
Query: 194 AEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSG 253
AE+C P LD QQ P+QELVAKDLHGVEWRFRHI+RGQPRRHLLTTGWS FVS K LV+G
Sbjct: 170 AEECLPRLDMSQQPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLTTGWSAFVSSKRLVAG 229
Query: 254 DAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYS 313
DA +FLRG++GELR+G+RR+++ +N +P S++S + + VL+ +A ST +MF VFY
Sbjct: 230 DAFIFLRGENGELRVGVRRALRQQNNMPTSVISSHSMHLGVLATAMHAFSTGTMFSVFYR 289
Query: 314 PRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPN 373
PR + ++FVIPY +Y++ + N IG RF+MRFE +++PE+R G + G+ D D RWP
Sbjct: 290 PRTSPSEFVIPYDQYMESVKNNYSIGMRFRMRFEGEETPEQRFTGTIVGVEDYDSNRWPA 349
Query: 374 SKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYPV 433
SKWRCL V+WDE + +VSPW+I+ S + ++ PR K+ RT + +P +
Sbjct: 350 SKWRCLKVQWDEQSSVERPLRVSPWKIEPSAAPTAINPPPIPRAKRPRTNVPSPSDVSHL 409
Query: 434 SARG--GGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVN 472
S G G+ + + R VLQGQE + V + T N
Sbjct: 410 SREGLPRGMTEHSQPPRYPGVLQGQEGMALVGGPFSSGTNN 450
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 56/106 (52%), Positives = 77/106 (72%), Gaps = 4/106 (3%)
Query: 666 SETPTP-SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPA 724
++ P P +QS RSCTKVH QG+ +GR++DL + GY DL++EL+ +F EG L DP
Sbjct: 598 TDRPLPHKAQSTSTRSCTKVHMQGNALGRSVDLTKFKGYKDLVAELDRMFGFEGELMDPM 657
Query: 725 KGWRILYTDSENDVMVVGDDPWH---EFCNEVSKIHIYTQEEVEKM 767
KGW+++YTD E D+M+VGDDPW E C V KI+IYT+EEV++M
Sbjct: 658 KGWQVVYTDDEGDMMLVGDDPWQRYREXCVMVRKIYIYTREEVQRM 703
>gi|357132990|ref|XP_003568111.1| PREDICTED: auxin response factor 14-like [Brachypodium distachyon]
Length = 676
Score = 416 bits (1069), Expect = e-113, Method: Compositional matrix adjust.
Identities = 226/469 (48%), Positives = 296/469 (63%), Gaps = 18/469 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
ELWHACAGP SLP++G+ +VY PQGHL P + P + C+V+DV+L
Sbjct: 26 ELWHACAGPGVSLPRQGSALVYLPQGHLASGGGGGGEVAGAAP--PVPPHVACRVLDVEL 83
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
A+ DEVY ++AL+ E+ NL + ++ G + P PHMFCKTLTAS
Sbjct: 84 CADAATDEVYARLALVAVCEMSRQNLGGTAWGEEDMEFGSGEKKP--RMPHMFCKTLTAS 141
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
DTSTHGGFSVPRRAAEDCFPPLDY+Q RPSQEL+AKDLHG +WRFRHIYRGQPRRHLLTT
Sbjct: 142 DTSTHGGFSVPRRAAEDCFPPLDYEQVRPSQELIAKDLHGTQWRFRHIYRGQPRRHLLTT 201
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVA 299
GWS FV++K LVSGDAVLFLRG DGELRLGIRR+VQ RN ++ +S LS VA
Sbjct: 202 GWSSFVNKKKLVSGDAVLFLRGCDGELRLGIRRAVQLRNEDLFKAVNSSDSRQRTLSAVA 261
Query: 300 NAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCNGV 359
++ +S FHV + PR+ ++F++PY K+ K + +P+ IG RFK+ +E +D+ E R G+
Sbjct: 262 SSFRNRSTFHVCFDPRSGASEFIVPYWKFSKSLNHPLSIGMRFKLSYESEDANE-RSTGM 320
Query: 360 VTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKK 419
++G++++DP RWP SKWRCL+VRWD +HQ ++SPWEI+R + ++ S K
Sbjct: 321 ISGVSEVDPIRWPGSKWRCLLVRWDGNTDCNHQHRISPWEIERVGGMNSVTHSLSASNSK 380
Query: 420 LRTGLQAPPP--DYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHPLGF 477
RT L P D PV G G D E + +VLQGQE +G S G P
Sbjct: 381 -RTKLSFPESNLDAPV-IDGNGYPDSMEIKKFRRVLQGQELMG--SKTRGVACSQSPDVA 436
Query: 478 EMRAPAHQSLALNGIRKDNINELVRALPTSYTGFVESNRFPKVLQGQEI 526
+R ++ + N+ E + GF ES FP+VLQGQE+
Sbjct: 437 NIRTSDNRWFS-------NVQEQASEFTYQHLGFGESVGFPEVLQGQEM 478
>gi|302756411|ref|XP_002961629.1| hypothetical protein SELMODRAFT_437944 [Selaginella moellendorffii]
gi|300170288|gb|EFJ36889.1| hypothetical protein SELMODRAFT_437944 [Selaginella moellendorffii]
Length = 795
Score = 415 bits (1067), Expect = e-113, Method: Compositional matrix adjust.
Identities = 211/406 (51%), Positives = 287/406 (70%), Gaps = 18/406 (4%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSS-AFPPIEVPNFDLQPQIFCKVVDVQ 118
E+WHACAGPL LP+ G+ VVYFPQGH+EQVA+S+ +++P+++L QI+C+++++
Sbjct: 36 EVWHACAGPLVCLPRVGDRVVYFPQGHIEQVAASTNQSADMQMPHYNLPSQIYCRLLNLT 95
Query: 119 LLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTA 178
L A++E DEV+ Q+ L+P+ E +G D +D E K MFCK LT+
Sbjct: 96 LGADRETDEVFAQMTLVPENE-QG---------DQSIDTEDELSPCPKRKLSMFCKNLTS 145
Query: 179 SDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLT 238
SDTSTHGGFSVPRRAAE+C PPLDY+Q P+QELVAKDLHGVEW+FRHIYRGQPRRHLLT
Sbjct: 146 SDTSTHGGFSVPRRAAEECLPPLDYQQSPPAQELVAKDLHGVEWKFRHIYRGQPRRHLLT 205
Query: 239 TGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLP-DSILSKQNSYPNVLSV 297
TGWS+FVSQK LV+GDAVLFLRG +GELR+G+RR+V+ +N + S+LS + + VL+
Sbjct: 206 TGWSVFVSQKKLVAGDAVLFLRGDNGELRIGVRRAVRQQNSVTSSSLLSSHSMHLGVLAA 265
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCN 357
A+AVSTK+MF +FY+PRA+ A+FV+PY KYVK + + +G RFKMRFE ++S ERR
Sbjct: 266 AAHAVSTKTMFTIFYNPRASPAEFVVPYHKYVKAFTHNLSVGMRFKMRFETEESSERRYM 325
Query: 358 GVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRM 417
G +TG+ D+D RW NSKWRCL V WDE ++ QE+VSPWEI+ ++ + ++ R+
Sbjct: 326 GTITGVGDIDSDRWINSKWRCLQVGWDEQTANERQERVSPWEIEPFIAPNVANPPTTQRV 385
Query: 418 KKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVS 463
KK R P ++P G D +++ + LQG +G S
Sbjct: 386 KKFRPN--TPANEFPT---GKNNSDSAQAMH-MRALQGSHALGMPS 425
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/196 (34%), Positives = 101/196 (51%), Gaps = 53/196 (27%)
Query: 657 CKLFGFSLTSETPTPSSQSPGK-------------------------------------- 678
CK+FGFSL ++P +S++P +
Sbjct: 598 CKIFGFSLIEKSPPAASRNPEEARLNPSRGGEQMTRCSGRAGPSAGNGSLEHERCASRPA 657
Query: 679 -----RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTD 733
R+CTKVH QG+ VGRA+DL + + Y++LL EL+ LF ++ L DP GW+++YTD
Sbjct: 658 SAWSLRTCTKVHLQGAAVGRAVDLSKFSCYSELLLELQQLFGLDNALDDPDSGWQVVYTD 717
Query: 734 SENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGTTDDTQSCLDQAPVIMEVSVSKS 793
+E D+++VGDDPW EFCN V I I + EVEK+ TQ L ++ V+ E ++
Sbjct: 718 NEGDMLLVGDDPWQEFCNMVRNIRILSPAEVEKL-------TQGALGKSAVVEEEPSTRD 770
Query: 794 SSV---SQPDSSPTVV 806
+S Q SSP +
Sbjct: 771 ASKLSDHQDSSSPPAI 786
>gi|357520589|ref|XP_003630583.1| Auxin response factor-like protein [Medicago truncatula]
gi|355524605|gb|AET05059.1| Auxin response factor-like protein [Medicago truncatula]
Length = 821
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 207/439 (47%), Positives = 289/439 (65%), Gaps = 20/439 (4%)
Query: 24 GKNNSGCVCYLNSSSSSSSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFP 83
G+NN V + SSSSS + ++ +Y ELWHACAGPL ++P++G +V YFP
Sbjct: 17 GENNVDGVGDAQNGSSSSSTGREAEAA------LYRELWHACAGPLVTVPREGELVFYFP 70
Query: 84 QGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEG 142
QGH+EQV AS++ +P +DL+P+I C+V++V L A + DEV+ QV L+P+P
Sbjct: 71 QGHIEQVEASTNQASEQHMPVYDLRPKILCRVINVMLKAEPDTDEVFAQVTLVPEP---- 126
Query: 143 LNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLD 202
++ V++E P + H FCKTLTASDTSTHGGFSV RR A++C PPLD
Sbjct: 127 ------NQDENAVEKEAPPAPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLD 180
Query: 203 YKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGK 262
+Q P+QELVAKDLHG EWRFRHI+RGQPRRHLL +GWS+FVS K LV+GDA +FLRG+
Sbjct: 181 MSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGE 240
Query: 263 DGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFV 322
+GELR+G+RR+++ + +P S++S + + VL+ +AV T +MF V+Y PR + A+F+
Sbjct: 241 NGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVLTGTMFTVYYKPRTSPAEFI 300
Query: 323 IPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVR 382
+PY +Y++ + N IG RFKMRFE +++PE+R G + GI D D RWP SKWRCL VR
Sbjct: 301 VPYDQYMESLKNNYTIGMRFKMRFEGEEAPEQRFTGTIVGIEDSDSKRWPTSKWRCLKVR 360
Query: 383 WDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGG--- 439
WDE E+VSPW+I+ +++ P L+ PR K+ R + PD V R
Sbjct: 361 WDETSNIPRPERVSPWKIEPALAPPALNPLPMPRPKRPRANVVPSSPDSSVLTREASSKV 420
Query: 440 VLDFEESVRSSKVLQGQEN 458
+D + +VLQGQE+
Sbjct: 421 SMDPLPTSGFQRVLQGQES 439
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 73/98 (74%)
Query: 674 QSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTD 733
QS RSCTKVHK+G +GR++DL + + Y++L +EL+ LF G L P K W +++TD
Sbjct: 693 QSGSARSCTKVHKKGIALGRSVDLTKFSDYDELTAELDQLFEFRGELISPQKDWLVVFTD 752
Query: 734 SENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGT 771
+E D+M+VGDDPW EFC+ V KI+IY +EE++KM+ GT
Sbjct: 753 NEGDMMLVGDDPWQEFCSMVRKIYIYPKEEIQKMSPGT 790
>gi|357520591|ref|XP_003630584.1| Auxin response factor-like protein [Medicago truncatula]
gi|355524606|gb|AET05060.1| Auxin response factor-like protein [Medicago truncatula]
Length = 715
Score = 414 bits (1065), Expect = e-113, Method: Compositional matrix adjust.
Identities = 207/439 (47%), Positives = 289/439 (65%), Gaps = 20/439 (4%)
Query: 24 GKNNSGCVCYLNSSSSSSSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFP 83
G+NN V + SSSSS + ++ +Y ELWHACAGPL ++P++G +V YFP
Sbjct: 17 GENNVDGVGDAQNGSSSSSTGREAEAA------LYRELWHACAGPLVTVPREGELVFYFP 70
Query: 84 QGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEG 142
QGH+EQV AS++ +P +DL+P+I C+V++V L A + DEV+ QV L+P+P
Sbjct: 71 QGHIEQVEASTNQASEQHMPVYDLRPKILCRVINVMLKAEPDTDEVFAQVTLVPEP---- 126
Query: 143 LNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLD 202
++ V++E P + H FCKTLTASDTSTHGGFSV RR A++C PPLD
Sbjct: 127 ------NQDENAVEKEAPPAPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLD 180
Query: 203 YKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGK 262
+Q P+QELVAKDLHG EWRFRHI+RGQPRRHLL +GWS+FVS K LV+GDA +FLRG+
Sbjct: 181 MSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGE 240
Query: 263 DGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFV 322
+GELR+G+RR+++ + +P S++S + + VL+ +AV T +MF V+Y PR + A+F+
Sbjct: 241 NGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVLTGTMFTVYYKPRTSPAEFI 300
Query: 323 IPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVR 382
+PY +Y++ + N IG RFKMRFE +++PE+R G + GI D D RWP SKWRCL VR
Sbjct: 301 VPYDQYMESLKNNYTIGMRFKMRFEGEEAPEQRFTGTIVGIEDSDSKRWPTSKWRCLKVR 360
Query: 383 WDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGG--- 439
WDE E+VSPW+I+ +++ P L+ PR K+ R + PD V R
Sbjct: 361 WDETSNIPRPERVSPWKIEPALAPPALNPLPMPRPKRPRANVVPSSPDSSVLTREASSKV 420
Query: 440 VLDFEESVRSSKVLQGQEN 458
+D + +VLQGQE+
Sbjct: 421 SMDPLPTSGFQRVLQGQES 439
>gi|357520593|ref|XP_003630585.1| Auxin response factor-like protein [Medicago truncatula]
gi|355524607|gb|AET05061.1| Auxin response factor-like protein [Medicago truncatula]
Length = 766
Score = 414 bits (1064), Expect = e-112, Method: Compositional matrix adjust.
Identities = 207/439 (47%), Positives = 289/439 (65%), Gaps = 20/439 (4%)
Query: 24 GKNNSGCVCYLNSSSSSSSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFP 83
G+NN V + SSSSS + ++ +Y ELWHACAGPL ++P++G +V YFP
Sbjct: 17 GENNVDGVGDAQNGSSSSSTGREAEAA------LYRELWHACAGPLVTVPREGELVFYFP 70
Query: 84 QGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEG 142
QGH+EQV AS++ +P +DL+P+I C+V++V L A + DEV+ QV L+P+P
Sbjct: 71 QGHIEQVEASTNQASEQHMPVYDLRPKILCRVINVMLKAEPDTDEVFAQVTLVPEP---- 126
Query: 143 LNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLD 202
++ V++E P + H FCKTLTASDTSTHGGFSV RR A++C PPLD
Sbjct: 127 ------NQDENAVEKEAPPAPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLD 180
Query: 203 YKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGK 262
+Q P+QELVAKDLHG EWRFRHI+RGQPRRHLL +GWS+FVS K LV+GDA +FLRG+
Sbjct: 181 MSKQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGE 240
Query: 263 DGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFV 322
+GELR+G+RR+++ + +P S++S + + VL+ +AV T +MF V+Y PR + A+F+
Sbjct: 241 NGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAVLTGTMFTVYYKPRTSPAEFI 300
Query: 323 IPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVR 382
+PY +Y++ + N IG RFKMRFE +++PE+R G + GI D D RWP SKWRCL VR
Sbjct: 301 VPYDQYMESLKNNYTIGMRFKMRFEGEEAPEQRFTGTIVGIEDSDSKRWPTSKWRCLKVR 360
Query: 383 WDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGG--- 439
WDE E+VSPW+I+ +++ P L+ PR K+ R + PD V R
Sbjct: 361 WDETSNIPRPERVSPWKIEPALAPPALNPLPMPRPKRPRANVVPSSPDSSVLTREASSKV 420
Query: 440 VLDFEESVRSSKVLQGQEN 458
+D + +VLQGQE+
Sbjct: 421 SMDPLPTSGFQRVLQGQES 439
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 53/74 (71%)
Query: 674 QSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTD 733
QS RSCTKVHK+G +GR++DL + + Y++L +EL+ LF G L P K W +++TD
Sbjct: 693 QSGSARSCTKVHKKGIALGRSVDLTKFSDYDELTAELDQLFEFRGELISPQKDWLVVFTD 752
Query: 734 SENDVMVVGDDPWH 747
+E D+M+VGDDPW
Sbjct: 753 NEGDMMLVGDDPWQ 766
>gi|359386136|gb|AEV43357.1| auxin-response factor [Citrus sinensis]
Length = 846
Score = 412 bits (1059), Expect = e-112, Method: Compositional matrix adjust.
Identities = 203/406 (50%), Positives = 279/406 (68%), Gaps = 14/406 (3%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKV 114
++Y ELWHACAGPL ++P++G V YFPQGH+EQV AS++ ++P +DL +I C+V
Sbjct: 44 ALYTELWHACAGPLVTVPREGERVYYFPQGHIEQVEASTNQVADQQMPVYDLPSKILCRV 103
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
++VQL A + DEV+ QV LLP E+ Q E+ V++E P + H FCK
Sbjct: 104 INVQLKAEPDTDEVFAQVTLLP---------ESNQDEN-AVEKEPPPPPPPRFHVHSFCK 153
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLTASDTSTHGGFSV RR A++C PPLD +Q P+QEL AKDLHG EWRFRHI+RGQPRR
Sbjct: 154 TLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELAAKDLHGNEWRFRHIFRGQPRR 213
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++ + +P S++S + + V
Sbjct: 214 HLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGV 273
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
L+ +AVST +MF V+Y PR + ++F++PY +Y++ I N IG RFKMRFE +++PE+
Sbjct: 274 LATAWHAVSTGTMFTVYYKPRTSPSEFIVPYDQYMESIKNNYSIGMRFKMRFEGEEAPEQ 333
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSS 414
R G + GI D DP RW +SKWRCL VRWDE E+VSPW+I+ +++ P L+
Sbjct: 334 RFTGTIVGIEDADPQRWRDSKWRCLKVRWDETSTIPRPERVSPWKIEPALAPPALNSLPM 393
Query: 415 PRMKKLRTGLQAPPPDYPVSARGGGV---LDFEESVRSSKVLQGQE 457
PR K+ R+ + PD V R G +D + S+VLQGQE
Sbjct: 394 PRPKRPRSNMLPSSPDSSVLTREGSSKLNVDPSSATGFSRVLQGQE 439
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 68/95 (71%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYT 732
+Q RSCTKV KQG +GR++DL + N Y++L++EL+ LF +G L P K W I+YT
Sbjct: 715 TQCGSTRSCTKVQKQGIALGRSVDLSKFNNYDELIAELDQLFEFDGELMAPKKNWLIVYT 774
Query: 733 DSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
D E D+M+VGDDPW EFC V KI IYT+EEV KM
Sbjct: 775 DDEGDMMLVGDDPWQEFCGMVRKIFIYTKEEVLKM 809
>gi|357136486|ref|XP_003569835.1| PREDICTED: auxin response factor 3-like [Brachypodium distachyon]
Length = 657
Score = 412 bits (1058), Expect = e-112, Method: Compositional matrix adjust.
Identities = 227/484 (46%), Positives = 308/484 (63%), Gaps = 28/484 (5%)
Query: 55 SSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKV 114
+++ ELWHACAGP+ +LP++G+ VVY PQ HL A++ + V L P + C+V
Sbjct: 22 TAVCRELWHACAGPIVALPRRGSKVVYLPQAHL---AAAGCGGDVAVA---LPPHVACRV 75
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
VDV+L A+ DEVY ++AL+ + E+ N+E + E E+G G ++ MFCK
Sbjct: 76 VDVELCADPSTDEVYARLALMAEGEVFERNMEGGRNEGEDDTEDGDGERKSRML-QMFCK 134
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLTASDTSTHGGFSVPRRAAEDCF PLDY+Q RPSQELVAKDLHG +WRFRHIYRGQPRR
Sbjct: 135 TLTASDTSTHGGFSVPRRAAEDCFSPLDYQQIRPSQELVAKDLHGAKWRFRHIYRGQPRR 194
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS FV++K LVSGDAVLFLRG DGEL+LG+RR++Q +N S +S N
Sbjct: 195 HLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELKLGVRRAIQLKNESLFKAFSSNSSKMNA 254
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
LS VAN++ +S+FH+ Y+PR ++F++PY K++K + +P CIG RFK+++ +D ER
Sbjct: 255 LSAVANSLKHRSVFHICYNPRDAASEFIVPYWKFLKSLNHPFCIGMRFKIQYGSEDVNER 314
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID---RSVSLPPLSI 411
R +G++TG+T++DP RWP S WR L+VRW++ + Q ++SPWEI+ SVS+
Sbjct: 315 R-SGMITGVTEVDPIRWPGSNWRSLLVRWEDGTDCNSQNRLSPWEIEIVGGSVSIAQSLP 373
Query: 412 QSSPRMKKL--RTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCD 469
SS + KL ++ L P + G G D + + +VLQGQE +G + C
Sbjct: 374 ASSSKRTKLCSQSNLDVP------TLYGNGCPDSMGTDKLPRVLQGQELMGSGTHRVTCS 427
Query: 470 TVNHPLGFEMRAPAHQSLALNGIRKDNINELVRALPT-----SY--TGFVESNRFPKVLQ 522
+ E + N R ++ LP SY GF ES FP+VLQ
Sbjct: 428 PQQAGV-TEFKCSDGMGFITN-TRSCMLSGPTSRLPARNSGFSYQSVGFGESVGFPEVLQ 485
Query: 523 GQEI 526
GQEI
Sbjct: 486 GQEI 489
>gi|224122162|ref|XP_002318767.1| predicted protein [Populus trichocarpa]
gi|222859440|gb|EEE96987.1| predicted protein [Populus trichocarpa]
Length = 854
Score = 410 bits (1055), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/438 (46%), Positives = 287/438 (65%), Gaps = 14/438 (3%)
Query: 24 GKNNSGCVCYLNSSSSSSSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFP 83
G S Y + S + SS+ +++Y ELWHACAGPL ++P++G+ V YFP
Sbjct: 17 GGGESFSSGYSEAMEGQKGHSTHPSSARDAETALYNELWHACAGPLVTVPREGDHVFYFP 76
Query: 84 QGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEG 142
QGHLEQV AS++ ++P +DL P+I C+VV+VQL A + DEV+ QV LLP
Sbjct: 77 QGHLEQVEASTNQVADQQMPLYDLPPKILCRVVNVQLKAEPDTDEVFAQVTLLP------ 130
Query: 143 LNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLD 202
++ ++E P + H FCKTLTASDTSTHGGFSV RR A++C PPLD
Sbjct: 131 ----LHNQDENASEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLD 186
Query: 203 YKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGK 262
+Q P+QELVAKDLHG EWRFRHI+RGQPRRHLL +GWS+FVS K LV+GDA +FLRG+
Sbjct: 187 MSRQPPTQELVAKDLHGSEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGE 246
Query: 263 DGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFV 322
+GELR+G+RR+++ ++ +P S++S + + VL+ +AVST +MF V+Y PR + A+F+
Sbjct: 247 NGELRVGVRRAMRQQSNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRTSPAEFI 306
Query: 323 IPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVR 382
+P+ +Y++ + + IG RFKMRFE +++PE+R G + GI D DP RW +SKWRCL VR
Sbjct: 307 VPFDQYMESVKSNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPSRWKDSKWRCLKVR 366
Query: 383 WDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGG--- 439
WDE ++VSPW+I+ +++ P L+ PR K+ R + PD V R G
Sbjct: 367 WDETSTIPRPDRVSPWKIEPALAPPALNPLPMPRPKRPRANMVPSSPDSSVLTREGSSKV 426
Query: 440 VLDFEESVRSSKVLQGQE 457
D + S+VL+GQE
Sbjct: 427 TADPSSASGFSRVLRGQE 444
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 72/99 (72%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYT 732
+Q+ RSCTKVHKQG +GR++DL R N Y++L++EL+ LF G L P K W I+YT
Sbjct: 722 AQNSSTRSCTKVHKQGIALGRSVDLTRFNNYDELIAELDRLFEFNGELLAPQKNWLIVYT 781
Query: 733 DSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGT 771
D E+D+M+VGDDPW EF V KI IYT+EEV+++ GT
Sbjct: 782 DDEDDMMLVGDDPWQEFVGMVRKIVIYTREEVQRIKPGT 820
>gi|302762557|ref|XP_002964700.1| hypothetical protein SELMODRAFT_438973 [Selaginella moellendorffii]
gi|300166933|gb|EFJ33538.1| hypothetical protein SELMODRAFT_438973 [Selaginella moellendorffii]
Length = 396
Score = 410 bits (1054), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/358 (56%), Positives = 268/358 (74%), Gaps = 16/358 (4%)
Query: 46 NSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSS-AFPPIEVPNF 104
N ++++L S E+WHACAGPL LP+ G+ VVYFPQGH+EQVA+S+ +++P++
Sbjct: 26 NHGNTNALDS----EVWHACAGPLVCLPRVGDRVVYFPQGHIEQVAASTNQSADMQMPHY 81
Query: 105 DLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSP 164
+L QI+C+++++ L A++E DEV+ Q+ L+P+ E +G D +D E
Sbjct: 82 NLPSQIYCRLLNLTLGADRETDEVFAQMTLVPENE-QG---------DQSIDTEDELSPC 131
Query: 165 TKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRF 224
K MFCK LT+SDTSTHGGFSVPRRAAE+C PPLDY+Q P+QELVAKDLHGVEW+F
Sbjct: 132 PKRKLSMFCKNLTSSDTSTHGGFSVPRRAAEECLPPLDYQQSPPAQELVAKDLHGVEWKF 191
Query: 225 RHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLP-DS 283
RHIYRGQPRRHLLTTGWS+FVSQK LV+GDAVLFLRG +GELR+G+RR+V+ +N + S
Sbjct: 192 RHIYRGQPRRHLLTTGWSVFVSQKKLVAGDAVLFLRGDNGELRIGVRRAVRQQNSVTSSS 251
Query: 284 ILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFK 343
+LS + + VL+ A+AVSTK+MF +FY+PRA+ A+FV+PY KYVK + + +G RFK
Sbjct: 252 LLSSHSMHLGVLAAAAHAVSTKTMFTIFYNPRASPAEFVVPYHKYVKAFTHNLSVGMRFK 311
Query: 344 MRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
MRFE ++S ERR G +TG+ D+D RW NSKWRCL V WDE ++ QE+VSPWEI+
Sbjct: 312 MRFETEESSERRYMGTITGVGDIDSDRWINSKWRCLQVGWDEQTANERQERVSPWEIE 369
>gi|356508865|ref|XP_003523174.1| PREDICTED: auxin response factor 2-like [Glycine max]
Length = 843
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/441 (46%), Positives = 288/441 (65%), Gaps = 24/441 (5%)
Query: 21 GDCGKNNSGCVCYLNSSSSSSSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVV 80
G+C +N G +S S++ A +++ ELWHACAGPL ++P++ V
Sbjct: 10 GNCLNHNDGGATEPHSPSTAKDAEA----------ALFRELWHACAGPLVTVPRERERVF 59
Query: 81 YFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPE 139
YFPQGH+EQV AS++ +P +DL P+I C+V++VQL A + DEV+ QV LLP+P
Sbjct: 60 YFPQGHIEQVEASTNQVADQHMPVYDLPPKILCRVINVQLKAEPDTDEVFAQVTLLPEP- 118
Query: 140 LEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFP 199
++ V++E P + H FCKTLTASDTSTHGGFSV RR A++C P
Sbjct: 119 ---------NQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLP 169
Query: 200 PLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFL 259
PLD +Q P+QELVAKDLH EWRF+HI+RGQPRRHLL +GWS+FVS K LV+GDA +FL
Sbjct: 170 PLDMSKQPPTQELVAKDLHANEWRFKHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL 229
Query: 260 RGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHA 319
RG++GELR+G+RR+++ + +P S++S + + VL+ +A+ST ++F V+Y PR + A
Sbjct: 230 RGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAISTGTIFTVYYKPRTSPA 289
Query: 320 DFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCL 379
+F++PY +Y++ + N IG RFKMRFE +++PE+R G + GI D DP RW +SKWRCL
Sbjct: 290 EFIVPYDQYMESLKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDSDPKRWRDSKWRCL 349
Query: 380 MVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGG 439
VRWDE + E+VSPW+I+ +++ P L+ S PR K+ R+ PD V R
Sbjct: 350 KVRWDETSNTPRPERVSPWKIEPALAPPALNPLSMPRPKRPRSNAVPSSPDSSVLTREAS 409
Query: 440 ---VLDFEESVRSSKVLQGQE 457
+D + +VLQGQE
Sbjct: 410 SKVSIDPSPANGFPRVLQGQE 430
Score = 117 bits (293), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 50/93 (53%), Positives = 71/93 (76%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDV 738
RSCTKVHK+G +GR++DL + +GY++L++EL+ LF G L K W I++TD+E D+
Sbjct: 713 RSCTKVHKKGIALGRSVDLTKYSGYDELVAELDQLFEFGGELLSTKKDWLIVFTDNEGDM 772
Query: 739 MVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGT 771
M+VGDDPW EFC V KI+IY +EE++KM+ GT
Sbjct: 773 MLVGDDPWQEFCAMVRKIYIYPKEEIQKMSPGT 805
>gi|356516493|ref|XP_003526928.1| PREDICTED: auxin response factor 2-like [Glycine max]
Length = 843
Score = 406 bits (1043), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/441 (46%), Positives = 287/441 (65%), Gaps = 24/441 (5%)
Query: 21 GDCGKNNSGCVCYLNSSSSSSSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVV 80
G+C +N G +S S++ A +++ ELWHACAGPL ++P++ V
Sbjct: 10 GNCLNHNDGGATEPHSPSTAKDAEA----------ALFRELWHACAGPLVTVPREKERVF 59
Query: 81 YFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPE 139
YFPQGH+EQV AS++ +P +DL P+I C+V++VQL A + DEV+ QV LLP+P
Sbjct: 60 YFPQGHIEQVEASTNQVADQHMPVYDLPPKILCRVINVQLKAEPDTDEVFAQVTLLPEP- 118
Query: 140 LEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFP 199
++ V++E P + H FCKTLTASDTSTHGGFSV RR A++C P
Sbjct: 119 ---------NQDENAVEKEPPPPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLP 169
Query: 200 PLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFL 259
PLD +Q P+QELVAKDLH EWRF+HI+RGQPRRHLL +GWS+FVS K LV+GDA +FL
Sbjct: 170 PLDMSKQPPTQELVAKDLHANEWRFKHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFL 229
Query: 260 RGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHA 319
RG++GELR+G+RR+++ + +P S++S + + VL+ +A+ T ++F V+Y PR + A
Sbjct: 230 RGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAILTGTIFTVYYKPRTSPA 289
Query: 320 DFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCL 379
+F++PY +Y++ + N IG RFKMRFE +++PE+R G V GI D DP RW +SKWRCL
Sbjct: 290 EFIVPYDQYMESLKNSYSIGMRFKMRFEGEEAPEQRFTGTVVGIEDSDPKRWRDSKWRCL 349
Query: 380 MVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGG 439
VRWDE + E+VSPW+I+ +++ P L+ S PR K+ R+ PD V R
Sbjct: 350 KVRWDETSNTPRPERVSPWKIEPALAPPALNPLSMPRPKRPRSNAVPSSPDSSVLTREAS 409
Query: 440 ---VLDFEESVRSSKVLQGQE 457
+D + +VLQGQE
Sbjct: 410 SKVSIDPSPANGFPRVLQGQE 430
Score = 119 bits (297), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 71/93 (76%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDV 738
RSCTKVHK+G +GR++DL + +GY++L++EL+ LF G L K W I+YTD+E D+
Sbjct: 713 RSCTKVHKKGIALGRSVDLTKYSGYDELVAELDQLFEFGGELLSTKKDWLIVYTDNEGDM 772
Query: 739 MVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGT 771
M+VGDDPW EFC V KI+IY +EE++KM+ GT
Sbjct: 773 MLVGDDPWQEFCAMVCKIYIYPKEEIQKMSPGT 805
>gi|195615760|gb|ACG29710.1| auxin response factor 4 [Zea mays]
Length = 680
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 265/662 (40%), Positives = 357/662 (53%), Gaps = 89/662 (13%)
Query: 54 SSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASS----SAFPPIEVPNFDLQPQ 109
+ ++ ELWHACAG +LP++G+ VVY PQ HL SA P VP P
Sbjct: 14 AGAVCAELWHACAGAGVALPRRGSAVVYLPQAHLAAGGCDGGGMSAPAPPRVP-----PH 68
Query: 110 IFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNL-EAKQLEDLGVDEEGGGRSPTKST 168
+ C+VVDV+L A+ DEVY ++AL+ + G N+ + + E G +E+G G K
Sbjct: 69 VVCRVVDVELRADAATDEVYARLALVAMDTMFGRNINDGETEEKNGEEEDGDGEK--KHA 126
Query: 169 PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIY 228
HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDY+Q RPSQEL+AKDLHG++WRFRHIY
Sbjct: 127 SHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFRHIY 186
Query: 229 RGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQ 288
RGQPRRHLLTTGWS F+++K LVSGDAVLFLRG DGELRLG+RR+VQ +N ++
Sbjct: 187 RGQPRRHLLTTGWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAVNCT 246
Query: 289 NSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEM 348
+S +LS VAN++ +S+FH+ ++PR ++F++PY K++K + P +GTRFK+ E
Sbjct: 247 DSKLLMLSAVANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSLNYPFSVGTRFKVGCEN 306
Query: 349 DDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPP 408
+D+ ER G++ GI+++DP WP SKW+ L+++WD HQ +VSPW+I+ S
Sbjct: 307 EDANERSF-GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGVGSSVS 365
Query: 409 LSIQSSPRMKKLRTGLQAPPPDY--PVSARGGGVLDFEESVRSSKVLQGQENV------- 459
++ + S + K RT L PP D P+ G G D E+ R +VLQGQE V
Sbjct: 366 VTHRLSSSVSK-RTKLCFPPSDLDTPI-LDGNGRPDSVETERFHRVLQGQELVHSSIHGA 423
Query: 460 ------------GFVSPLYGCDTVNHPLGFEMRAPAHQSLALNGIRKDNINELVRALPTS 507
G + D N + M P H LN
Sbjct: 424 ACSHSSDSPRCQGSYGRRFSADAWNCKMNDVMSGPRH----LNAT----------GFAYQ 469
Query: 508 YTGFVESNRFPKVLQGQEICPLRSLTGKVDLNLGTWGKPNF---GCNSMNMYQASKPNIY 564
GF ES +F +VLQGQE+ + P+F NS +P Y
Sbjct: 470 PLGFSESVKFSEVLQGQEM---------------SQAVPSFMRSAFNSGTQNGRVRPFDY 514
Query: 565 PPPSESLSNMFFPYGDMPKTVQH---------HTMPPYA---SNLQRENVKLNSSSIQMP 612
S++ ++P T H TM P+A RE V S +
Sbjct: 515 VQRSDATQGYALQQFNLPATEVHSPSSVLMFNQTMVPHAELDGATNREEVH-GSRYLSSN 573
Query: 613 AIGAEIRKANLLNEHKPVEN----IPTPTFKANMRSHKDGSFNGTAAG---CKLFGFSLT 665
AIG E + + + N + T A R+ + GS G G CKLFGFSLT
Sbjct: 574 AIGREAEPWPSMEQQRASVNGSEPLDTTEASAPARNAESGSV-GRGVGRSSCKLFGFSLT 632
Query: 666 SE 667
+
Sbjct: 633 EK 634
>gi|301793229|emb|CBA12005.1| putative auxin response factor 3/4, partial [Cycas rumphii]
Length = 811
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 214/373 (57%), Positives = 261/373 (69%), Gaps = 37/373 (9%)
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAEDCFPPLDY QQRPSQEL+AKDLHGVEWRFRHIYRGQPRRHLL
Sbjct: 1 ASDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELLAKDLHGVEWRFRHIYRGQPRRHLL 60
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FV QK LVSGDAVLFLR ++GELRLGIRR+ + ++ +P S++S Q+ + VL+
Sbjct: 61 TTGWSVFVGQKGLVSGDAVLFLRDENGELRLGIRRASRQQSVVPSSVVSSQSMHLGVLAA 120
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCN 357
ANAVSTKSMFH+FY+PRA+ A+F+IPYQKYVK P+ IG RFKMRFE +D+ ERR
Sbjct: 121 AANAVSTKSMFHIFYNPRASPAEFIIPYQKYVKSCSQPLSIGMRFKMRFETEDAAERRYT 180
Query: 358 GVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRM 417
G++TGI D+DP RWP SKWR LMV WDE ++ QE+VSPWEI+ S+S+ LSI S R+
Sbjct: 181 GIITGIGDVDPTRWPGSKWRSLMVGWDEHAANEQQERVSPWEIEPSISVSGLSIPSCSRI 240
Query: 418 KKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLY--GCDTVNHPL 475
K+LRT L + P D+ V GG + DF ESVR KVLQGQE + F +P G D +
Sbjct: 241 KRLRTNLPSTPVDFSV-PDGGRLYDFGESVRFQKVLQGQEMMSFKTPFRNDGVDLIK--- 296
Query: 476 GFEMRAPAHQSLALNGIRKDNINELVRALPTSYTG------------------FVESNRF 517
+Q+ G ++ + + T+ TG F ES F
Sbjct: 297 --------NQASEYKG-----VDSVTKGFETAKTGIEIRPSLGRFNISSRLLDFGESVGF 343
Query: 518 PKVLQGQEICPLR 530
KVLQGQEI PL+
Sbjct: 344 QKVLQGQEILPLK 356
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/125 (62%), Positives = 99/125 (79%), Gaps = 4/125 (3%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDV 738
RSCTKVHKQG+ VGRA+DL +L+GY++L+SELE LFNMEGLL DP KGW+++YTDSE+D+
Sbjct: 670 RSCTKVHKQGNAVGRAVDLSKLDGYDELISELERLFNMEGLLNDPDKGWQVVYTDSEDDM 729
Query: 739 MVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGT-TDDTQSCLDQAPVIMEVSVSKSSSVS 797
M+VGDDPW EFCN V KI IYT EE++K T G +DD SC ++ P IME+S S+
Sbjct: 730 MLVGDDPWQEFCNIVCKILIYTHEELKKWTPGMLSDDAHSCSEEQPAIMEIS---KCSID 786
Query: 798 QPDSS 802
+ DSS
Sbjct: 787 REDSS 791
>gi|225456475|ref|XP_002284543.1| PREDICTED: auxin response factor 2 [Vitis vinifera]
gi|297734502|emb|CBI15749.3| unnamed protein product [Vitis vinifera]
Length = 862
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 204/449 (45%), Positives = 290/449 (64%), Gaps = 16/449 (3%)
Query: 13 GEKIAFCNGDCGKNNSGCVCYLNSSSSSSSCSANSSSSSSLSSSIYFELWHACAGPLTSL 72
G +F +G N+ G + + S+ S + +++Y ELWHACAGPL ++
Sbjct: 15 GRGESFTSGYSEPNDGGVSRSV--AEGQKGHSSVSGAGKDFETALYTELWHACAGPLVTV 72
Query: 73 PKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKVVDVQLLANKENDEVYTQ 131
P++ V YFPQGH+EQV AS++ ++P +DL +I C+V++VQL A + DEV+ Q
Sbjct: 73 PRERERVFYFPQGHIEQVEASTNQVSDQQMPVYDLPSKILCRVINVQLKAEPDTDEVFAQ 132
Query: 132 VALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPR 191
V LLP+P ++ ++E P + H FCKTLTASDTSTHGGFSV R
Sbjct: 133 VTLLPEP----------NQDETAQEKEPLPPPPPRFHVHSFCKTLTASDTSTHGGFSVLR 182
Query: 192 RAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLV 251
R A++C P LD +Q P+QELVAKDLHG EWRFRHI+RGQPRRHLL +GWS+FVS K LV
Sbjct: 183 RHADECLPQLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLV 242
Query: 252 SGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVF 311
+GDA +FLRG++GELR+G+RR+++ + +P S++S + + VL+ +A ST +MF V+
Sbjct: 243 AGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAKSTGTMFTVY 302
Query: 312 YSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRW 371
Y PR + A+F++P+ +Y++ + N IG RFKMRFE +++PE+R G + GI D DP RW
Sbjct: 303 YKPRTSPAEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPKRW 362
Query: 372 PNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDY 431
+SKWRCL VRWDE ++VSPW+I+ +V+ P L+ PR K+ R+ + PD
Sbjct: 363 RDSKWRCLKVRWDETSTIPRPDRVSPWKIEPAVTPPALNPLPVPRPKRPRSNMVPSSPDS 422
Query: 432 PVSARGGG---VLDFEESVRSSKVLQGQE 457
V R G +D + S+VLQGQE
Sbjct: 423 SVLTREGSSKVTVDPSPASGFSRVLQGQE 451
Score = 127 bits (319), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/114 (51%), Positives = 77/114 (67%), Gaps = 3/114 (2%)
Query: 674 QSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTD 733
QS RSCTKVHKQG +GR++DL + N Y++L++EL+ LF G L P K W I+YTD
Sbjct: 731 QSVSTRSCTKVHKQGIALGRSVDLTKFNNYDELIAELDQLFEFGGELMAPKKNWLIVYTD 790
Query: 734 SENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGTTDDTQSCLDQAPVIME 787
E D+M+VGDDPW EFC V KI+IYT+EEV++M GT + D P + E
Sbjct: 791 DEGDMMLVGDDPWQEFCGMVRKIYIYTREEVQRMNPGTLNSKN---DDNPSVAE 841
>gi|356513463|ref|XP_003525433.1| PREDICTED: auxin response factor 2-like [Glycine max]
Length = 858
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 197/407 (48%), Positives = 275/407 (67%), Gaps = 14/407 (3%)
Query: 55 SSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCK 113
+++Y ELWHACAGPL ++P++G V YFPQGH+EQV AS++ +P +DL P+I C+
Sbjct: 52 AALYRELWHACAGPLVTVPREGERVFYFPQGHIEQVEASTNQVAEQHMPVYDLPPKILCR 111
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFC 173
V++V L A + DEV+ QV LLP+P ++ V++EG +P + H FC
Sbjct: 112 VINVMLKAEPDTDEVFAQVTLLPEP----------NQDENAVEKEGPPAAPPRFHVHSFC 161
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
KTLTASDTSTHGGFSV RR A++C PPLD +Q P+QELVAKDLHG EWRFRHI+RGQPR
Sbjct: 162 KTLTASDTSTHGGFSVLRRHADECLPPLDMTKQPPTQELVAKDLHGNEWRFRHIFRGQPR 221
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
RHLL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++ + +P S++S + +
Sbjct: 222 RHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLG 281
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
VL+ +A+ T +MF V+Y PR + A+F++PY +Y++ + N IG RFKMRFE +++PE
Sbjct: 282 VLATAWHAILTGTMFTVYYKPRTSPAEFIVPYDQYMESLKNNYTIGMRFKMRFEGEEAPE 341
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS 413
+R G + GI D D RWP SKWR L VRWDE E+VS W+I+ +++ P L+
Sbjct: 342 QRFTGTIVGIEDADTKRWPKSKWRSLKVRWDETSNIPRPERVSQWKIEPALAPPALNPLP 401
Query: 414 SPRMKKLRTGLQAPPPDYPVSARGGG---VLDFEESVRSSKVLQGQE 457
PR K+ R+ + PD V R +D + +VLQGQE
Sbjct: 402 MPRPKRPRSNVVPSSPDSSVLTREASSKVSVDPLPTSGFQRVLQGQE 448
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 84/129 (65%), Gaps = 4/129 (3%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYT 732
S S RSCTKVHK+G +GR++DL + + Y +L++EL+ LF GLL P K W I+YT
Sbjct: 728 SHSGSARSCTKVHKKGIALGRSVDLTKFSDYGELIAELDQLFEFGGLLTSPQKDWLIVYT 787
Query: 733 DSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGT----TDDTQSCLDQAPVIMEV 788
D+E D+M+VGDDPW EF V KI+IY +EE++KM+ GT ++ QS + A E+
Sbjct: 788 DNEGDMMLVGDDPWQEFVAMVRKIYIYPKEEIQKMSPGTLSSKNEENQSASEGATDTQEI 847
Query: 789 SVSKSSSVS 797
++S S
Sbjct: 848 KCQLNNSAS 856
>gi|334188562|ref|NP_001190591.1| auxin response factor 2 [Arabidopsis thaliana]
gi|332010168|gb|AED97551.1| auxin response factor 2 [Arabidopsis thaliana]
Length = 853
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/423 (46%), Positives = 286/423 (67%), Gaps = 14/423 (3%)
Query: 39 SSSSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFP 97
S+S+ SA + + +++Y ELWHACAGPL ++P++ + V YFPQGH+EQV AS++
Sbjct: 40 SNSTRSAAAERALDPEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAA 99
Query: 98 PIEVPNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDE 157
++P +DL ++ C+V++V L A + DEVY Q+ LLP EA Q E+ +++
Sbjct: 100 EQQMPLYDLPSKLLCRVINVDLKAEADTDEVYAQITLLP---------EANQDEN-AIEK 149
Query: 158 EGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDL 217
E P + H FCKTLTASDTSTHGGFSV RR A++C PPLD +Q P+QELVAKDL
Sbjct: 150 EAPLPPPPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDL 209
Query: 218 HGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPR 277
H EWRFRHI+RGQPRRHLL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++ +
Sbjct: 210 HANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQ 269
Query: 278 NGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPIC 337
+P S++S + + VL+ +A+ST +MF V+Y PR + ++F++P+ +Y++ + N
Sbjct: 270 GNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYS 329
Query: 338 IGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSP 397
IG RFKMRFE +++PE+R G + GI + DP RWP SKWR L VRWDE ++VSP
Sbjct: 330 IGMRFKMRFEGEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSP 389
Query: 398 WEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGGV---LDFEESVRSSKVLQ 454
W+++ +++ P LS PR K+ R+ + PD + R G +D + S+VLQ
Sbjct: 390 WKVEPALAPPALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMDPLPASGLSRVLQ 449
Query: 455 GQE 457
GQE
Sbjct: 450 GQE 452
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 104/193 (53%), Gaps = 9/193 (4%)
Query: 582 PKTVQHHTMPPYASNLQRENVKLNSSSIQMPAIGAEIRKANLLNEHKPVENIPTPTFKAN 641
P T+Q T N + + L ++ M + + + N LN+ + I +P + +
Sbjct: 639 PFTIQEETAKSREGNCRLFGIPLTNN---MNGTDSTMSQRNNLNDAAGLTQIASPKVQ-D 694
Query: 642 MRSHKDGSFNGTAAGCKLFGFSLTSETPTPS---SQSPGKRSCTKVHKQGSLVGRAIDLW 698
+ GS + + G + P P +++ RSCTKVHKQG +GR++DL
Sbjct: 695 LSDQSKGS--KSTNDHREQGRPFQTNNPHPKDAQTKTNSSRSCTKVHKQGIALGRSVDLS 752
Query: 699 RLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHI 758
+ Y +L++EL+ LF G L P K W I+YTD END+M+VGDDPW EFC V KI I
Sbjct: 753 KFQNYEELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFI 812
Query: 759 YTQEEVEKMTIGT 771
YT+EEV KM GT
Sbjct: 813 YTKEEVRKMNPGT 825
>gi|223973083|gb|ACN30729.1| unknown [Zea mays]
Length = 680
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 264/659 (40%), Positives = 356/659 (54%), Gaps = 83/659 (12%)
Query: 54 SSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASS----SAFPPIEVPNFDLQPQ 109
+ ++ ELWHACAG +LP++G+ VVY PQ HL SA P VP P
Sbjct: 14 AGAVCAELWHACAGAGVALPRRGSAVVYLPQAHLAAGGCDGGGMSAPAPPRVP-----PH 68
Query: 110 IFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNL-EAKQLEDLGVDEEGGGRSPTKST 168
+ C+VVDV+L A+ DEVY ++AL+ + G N+ + + E G +E+G G K
Sbjct: 69 VVCRVVDVELRADAATDEVYARLALVAMDTMFGRNINDGETEEKNGEEEDGDGEK--KHA 126
Query: 169 PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIY 228
HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDY+Q RPSQEL+AKDLHG++WRFRHIY
Sbjct: 127 SHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFRHIY 186
Query: 229 RGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQ 288
RGQPRRHLLTTGWS F+++K LVSGDAVLFLRG DGELRLG+RR+VQ +N ++
Sbjct: 187 RGQPRRHLLTTGWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAVNCT 246
Query: 289 NSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEM 348
+S +LS VAN++ +S+FH+ ++PR ++F++PY K++K + P +GTRFK+ E
Sbjct: 247 DSKLLMLSAVANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSLNYPFSVGTRFKVGCEN 306
Query: 349 DDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPP 408
+D+ ER G++ GI+++DP WP SKW+ L+++WD HQ +VSPW+I+ S
Sbjct: 307 EDANERSF-GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGVGSSVL 365
Query: 409 LSIQSSPRMKKLRTGLQAPPPDY--PVSARGGGVLDFEESVRSSKVLQGQENV------- 459
++ + S + K RT L PP D P+ G G D E+ R +VLQGQE V
Sbjct: 366 VTHRLSSSVSK-RTKLCFPPSDLDTPI-LDGNGRPDSVETERFHRVLQGQELVHPSIHGA 423
Query: 460 ------------GFVSPLYGCDTVNHPLGFEMRAPAHQSLALNGIRKDNINELVRALPTS 507
G + D N + M P H LN
Sbjct: 424 ACSHSSDSPRCQGSYGRRFSADVWNCKMNDVMSGPRH----LNAT----------GFAYQ 469
Query: 508 YTGFVESNRFPKVLQGQEICPLRSLTGKVDLNLGTWGKPNFGCNSMNMYQASKPNIYPPP 567
GF ES +F +VLQGQEI + N GT +P Y
Sbjct: 470 PLGFSESVKFSEVLQGQEISQAVPSFMRSAFNAGT------------QNGRVRPFDYVQR 517
Query: 568 SESLSNMFFPYGDMPKTVQH---------HTMPPYA---SNLQRENVKLNSSSIQMPAIG 615
S++ ++P T H TM P+A RE V S ++ +IG
Sbjct: 518 SDATQGYALQQFNLPATEVHSPSSVLMFNQTMVPHAELDGVTNREEVH-GSRNLSSNSIG 576
Query: 616 AEIRKANLLNEHKPVEN----IPTPTFKANMRSHKDGSFNGTAAG---CKLFGFSLTSE 667
E + + + N + T A R+ + GS G G CKLFGFSLT +
Sbjct: 577 REAEPWPSMQQQRASVNGSEPLDTTEASAPARNAESGSV-GRGVGRSSCKLFGFSLTEK 634
>gi|30697610|ref|NP_851244.1| auxin response factor 2 [Arabidopsis thaliana]
gi|30697612|ref|NP_201006.2| auxin response factor 2 [Arabidopsis thaliana]
gi|42573768|ref|NP_974980.1| auxin response factor 2 [Arabidopsis thaliana]
gi|46395940|sp|Q94JM3.2|ARFB_ARATH RecName: Full=Auxin response factor 2; AltName: Full=ARF1-binding
protein; Short=ARF1-BP; AltName: Full=Protein
MEGAINTEGUMENTA
gi|10176918|dbj|BAB10162.1| auxin response factor-like protein [Arabidopsis thaliana]
gi|23397283|gb|AAN31923.1| auxin response factor [Arabidopsis thaliana]
gi|49616349|gb|AAT67071.1| ARF2 [Arabidopsis thaliana]
gi|62319913|dbj|BAD93985.1| ARF1-binding protein [Arabidopsis thaliana]
gi|62319959|dbj|BAD94058.1| ARF1-binding protein [Arabidopsis thaliana]
gi|332010165|gb|AED97548.1| auxin response factor 2 [Arabidopsis thaliana]
gi|332010166|gb|AED97549.1| auxin response factor 2 [Arabidopsis thaliana]
gi|332010167|gb|AED97550.1| auxin response factor 2 [Arabidopsis thaliana]
Length = 859
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/423 (46%), Positives = 286/423 (67%), Gaps = 14/423 (3%)
Query: 39 SSSSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFP 97
S+S+ SA + + +++Y ELWHACAGPL ++P++ + V YFPQGH+EQV AS++
Sbjct: 40 SNSTRSAAAERALDPEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAA 99
Query: 98 PIEVPNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDE 157
++P +DL ++ C+V++V L A + DEVY Q+ LLP EA Q E+ +++
Sbjct: 100 EQQMPLYDLPSKLLCRVINVDLKAEADTDEVYAQITLLP---------EANQDEN-AIEK 149
Query: 158 EGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDL 217
E P + H FCKTLTASDTSTHGGFSV RR A++C PPLD +Q P+QELVAKDL
Sbjct: 150 EAPLPPPPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDL 209
Query: 218 HGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPR 277
H EWRFRHI+RGQPRRHLL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++ +
Sbjct: 210 HANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQ 269
Query: 278 NGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPIC 337
+P S++S + + VL+ +A+ST +MF V+Y PR + ++F++P+ +Y++ + N
Sbjct: 270 GNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYS 329
Query: 338 IGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSP 397
IG RFKMRFE +++PE+R G + GI + DP RWP SKWR L VRWDE ++VSP
Sbjct: 330 IGMRFKMRFEGEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSP 389
Query: 398 WEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGGV---LDFEESVRSSKVLQ 454
W+++ +++ P LS PR K+ R+ + PD + R G +D + S+VLQ
Sbjct: 390 WKVEPALAPPALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMDPLPASGLSRVLQ 449
Query: 455 GQE 457
GQE
Sbjct: 450 GQE 452
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 104/193 (53%), Gaps = 9/193 (4%)
Query: 582 PKTVQHHTMPPYASNLQRENVKLNSSSIQMPAIGAEIRKANLLNEHKPVENIPTPTFKAN 641
P T+Q T N + + L ++ M + + + N LN+ + I +P + +
Sbjct: 639 PFTIQEETAKSREGNCRLFGIPLTNN---MNGTDSTMSQRNNLNDAAGLTQIASPKVQ-D 694
Query: 642 MRSHKDGSFNGTAAGCKLFGFSLTSETPTPS---SQSPGKRSCTKVHKQGSLVGRAIDLW 698
+ GS + + G + P P +++ RSCTKVHKQG +GR++DL
Sbjct: 695 LSDQSKGS--KSTNDHREQGRPFQTNNPHPKDAQTKTNSSRSCTKVHKQGIALGRSVDLS 752
Query: 699 RLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHI 758
+ Y +L++EL+ LF G L P K W I+YTD END+M+VGDDPW EFC V KI I
Sbjct: 753 KFQNYEELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFI 812
Query: 759 YTQEEVEKMTIGT 771
YT+EEV KM GT
Sbjct: 813 YTKEEVRKMNPGT 825
>gi|62319853|dbj|BAD93891.1| ARF1-binding protein [Arabidopsis thaliana]
gi|62319857|dbj|BAD93897.1| ARF1-binding protein [Arabidopsis thaliana]
gi|62319897|dbj|BAD93959.1| ARF1-binding protein [Arabidopsis thaliana]
Length = 859
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/423 (46%), Positives = 286/423 (67%), Gaps = 14/423 (3%)
Query: 39 SSSSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFP 97
S+S+ SA + + +++Y ELWHACAGPL ++P++ + V YFPQGH+EQV AS++
Sbjct: 40 SNSTRSAAAERALDPEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAA 99
Query: 98 PIEVPNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDE 157
++P +DL ++ C+V++V L A + DEVY Q+ LLP EA Q E+ +++
Sbjct: 100 EQQMPLYDLPSKLLCRVINVDLKAEADTDEVYAQITLLP---------EANQDEN-AIEK 149
Query: 158 EGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDL 217
E P + H FCKTLTASDTSTHGGFSV RR A++C PPLD +Q P+QELVAKDL
Sbjct: 150 EAPLPPPPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDL 209
Query: 218 HGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPR 277
H EWRFRHI+RGQPRRHLL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++ +
Sbjct: 210 HANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQ 269
Query: 278 NGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPIC 337
+P S++S + + VL+ +A+ST +MF V+Y PR + ++F++P+ +Y++ + N
Sbjct: 270 GNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYS 329
Query: 338 IGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSP 397
IG RFKMRFE +++PE+R G + GI + DP RWP SKWR L VRWDE ++VSP
Sbjct: 330 IGMRFKMRFEGEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSP 389
Query: 398 WEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGGV---LDFEESVRSSKVLQ 454
W+++ +++ P LS PR K+ R+ + PD + R G +D + S+VLQ
Sbjct: 390 WKVEPALAPPALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMDPLPASGLSRVLQ 449
Query: 455 GQE 457
GQE
Sbjct: 450 GQE 452
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 118/223 (52%), Gaps = 15/223 (6%)
Query: 582 PKTVQHHTMPPYASNLQRENVKLNSSSIQMPAIGAEIRKANLLNEHKPVENIPTPTFKAN 641
P T+Q T N + + L ++ M + + + N LN+ + I +P + +
Sbjct: 639 PFTIQEETAKSREGNCRLFGIPLTNN---MNGTDSTMSQRNNLNDAAGLTQIASPKVQ-D 694
Query: 642 MRSHKDGSFNGTAAGCKLFGFSLTSETPTPS---SQSPGKRSCTKVHKQGSLVGRAIDLW 698
+ GS + + G + P P +++ RSCTKVHKQG +GR++DL
Sbjct: 695 LSDQSKGS--KSTNDHREQGRPFQTNNPHPKDAQTKTNSSRSCTKVHKQGIALGRSVDLS 752
Query: 699 RLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHI 758
+ Y +L++EL+ LF G L P K W I+YTD END+M+VGDDPW EFC V KI I
Sbjct: 753 KFQNYEELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFI 812
Query: 759 YTQEEVEKMTIGTTDDTQSCL-DQAPVIMEVSVSK-SSSVSQP 799
YT+EEV KM GT SC ++ V+ E S +K + S S P
Sbjct: 813 YTKEEVRKMNPGTV----SCRSEEEAVVGEGSDAKDAKSASNP 851
>gi|62319903|dbj|BAD93968.1| ARF1-binding protein [Arabidopsis thaliana]
Length = 859
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/423 (46%), Positives = 286/423 (67%), Gaps = 14/423 (3%)
Query: 39 SSSSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFP 97
S+S+ SA + + +++Y ELWHACAGPL ++P++ + V YFPQGH+EQV AS++
Sbjct: 40 SNSTRSAAAERALDPEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAA 99
Query: 98 PIEVPNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDE 157
++P +DL ++ C+V++V L A + DEVY Q+ LLP EA Q E+ +++
Sbjct: 100 EQQMPLYDLPSKLLCRVINVDLKAEADTDEVYAQITLLP---------EANQDEN-AIEK 149
Query: 158 EGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDL 217
E P + H FCKTLTASDTSTHGGFSV RR A++C PPLD +Q P+QELVAKDL
Sbjct: 150 EAPLPPPPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDL 209
Query: 218 HGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPR 277
H EWRFRHI+RGQPRRHLL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++ +
Sbjct: 210 HANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQ 269
Query: 278 NGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPIC 337
+P S++S + + VL+ +A+ST +MF V+Y PR + ++F++P+ +Y++ + N
Sbjct: 270 GNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYS 329
Query: 338 IGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSP 397
IG RFKMRFE +++PE+R G + GI + DP RWP SKWR L VRWDE ++VSP
Sbjct: 330 IGMRFKMRFEGEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSP 389
Query: 398 WEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGGV---LDFEESVRSSKVLQ 454
W+++ +++ P LS PR K+ R+ + PD + R G +D + S+VLQ
Sbjct: 390 WKVEPALAPPALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMDPLPASGLSRVLQ 449
Query: 455 GQE 457
GQE
Sbjct: 450 GQE 452
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 104/193 (53%), Gaps = 9/193 (4%)
Query: 582 PKTVQHHTMPPYASNLQRENVKLNSSSIQMPAIGAEIRKANLLNEHKPVENIPTPTFKAN 641
P T+Q T N + + L ++ M + + + N LN+ + I +P + +
Sbjct: 639 PFTIQEETAKSREGNCRLFGIPLTNN---MNGTDSTMSQRNNLNDAAGLTQIASPKVQ-D 694
Query: 642 MRSHKDGSFNGTAAGCKLFGFSLTSETPTPS---SQSPGKRSCTKVHKQGSLVGRAIDLW 698
+ GS + + G + P P +++ RSCTKVHKQG +GR++DL
Sbjct: 695 LSDQSKGS--KSTNDHREQGRPFQTNNPHPKDAQTKTNSSRSCTKVHKQGIALGRSVDLS 752
Query: 699 RLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHI 758
+ Y +L++EL+ LF G L P K W I+YTD END+M+VGDDPW EFC V KI I
Sbjct: 753 KFQNYEELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFI 812
Query: 759 YTQEEVEKMTIGT 771
YT+EEV KM GT
Sbjct: 813 YTKEEVRKMNPGT 825
>gi|224030497|gb|ACN34324.1| unknown [Zea mays]
gi|407232698|gb|AFT82691.1| ARF23 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|413946059|gb|AFW78708.1| auxin response factor 4 [Zea mays]
Length = 680
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 265/662 (40%), Positives = 357/662 (53%), Gaps = 89/662 (13%)
Query: 54 SSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASS----SAFPPIEVPNFDLQPQ 109
+ ++ ELWHACAG +LP++G+ VVY PQ HL SA P VP P
Sbjct: 14 AGAVCAELWHACAGAGVALPRRGSAVVYLPQAHLAAGGCDGGGVSAPAPPRVP-----PH 68
Query: 110 IFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNL-EAKQLEDLGVDEEGGGRSPTKST 168
+ C+VVDV+L A+ DEVY ++AL+ + G N+ + + E G +E+G G K
Sbjct: 69 VVCRVVDVELRADAATDEVYARLALVAMDTMFGRNINDGETEEKNGEEEDGDGEK--KHA 126
Query: 169 PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIY 228
HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDY+Q RPSQEL+AKDLHG++WRFRHIY
Sbjct: 127 SHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFRHIY 186
Query: 229 RGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQ 288
RGQPRRHLLTTGWS F+++K LVSGDAVLFLRG DGELRLG+RR+VQ +N ++
Sbjct: 187 RGQPRRHLLTTGWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAVNCT 246
Query: 289 NSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEM 348
+S +LS VAN++ +S+FH+ ++PR ++F++PY K++K + +GTRFK+ E
Sbjct: 247 DSKLLMLSAVANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSLNYHFSVGTRFKVGCEN 306
Query: 349 DDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPP 408
+D+ ER G++ GI+++DP WP SKW+ L+++WD HQ +VSPW+I+ S
Sbjct: 307 EDANERSF-GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGVGSSVS 365
Query: 409 LSIQSSPRMKKLRTGLQAPPPDY--PVSARGGGVLDFEESVRSSKVLQGQENV------- 459
++ + S + K RT L PP D P+ G G D E+ R +VLQGQE V
Sbjct: 366 VTHRLSSSVSK-RTKLCFPPSDLDTPI-LDGNGRPDSVETERFHRVLQGQELVHSSIHGT 423
Query: 460 ------------GFVSPLYGCDTVNHPLGFEMRAPAHQSLALNGIRKDNINELVRALPTS 507
G + D N + M P H LN
Sbjct: 424 ACSHSSDSPRCQGSYGRRFSADAWNCKMNDVMSGPRH----LNAT----------GFAYQ 469
Query: 508 YTGFVESNRFPKVLQGQEICPLRSLTGKVDLNLGTWGKPNF---GCNSMNMYQASKPNIY 564
GF ES +F +VLQGQE+ + P+F NS +P Y
Sbjct: 470 PLGFSESVKFSEVLQGQEM---------------SQAVPSFMRSAFNSGTQNGRVRPFDY 514
Query: 565 PPPSESLSNMFFPYGDMPKTVQH---------HTMPPYA---SNLQRENVKLNSSSIQMP 612
S++ ++P T H TM P+A RE V S +
Sbjct: 515 VQRSDATQGYALQQFNLPATEVHSPSSVLMFNQTMVPHAELDGATNREEVH-GSRYLSSN 573
Query: 613 AIGAEIRKANLLNEHKPVEN----IPTPTFKANMRSHKDGSFNGTAAG---CKLFGFSLT 665
AIG E + + + N + T A R+ + GS G AG CKLFGFSLT
Sbjct: 574 AIGREAEPWPSMQQQRASVNGSEPLDTTEASAPARNAESGSV-GRGAGRSNCKLFGFSLT 632
Query: 666 SE 667
+
Sbjct: 633 EK 634
>gi|14190369|gb|AAK55665.1|AF378862_1 AT5g62000/mtg10_20 [Arabidopsis thaliana]
gi|24111405|gb|AAN46837.1| At5g62000/mtg10_20 [Arabidopsis thaliana]
Length = 678
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/464 (43%), Positives = 297/464 (64%), Gaps = 22/464 (4%)
Query: 39 SSSSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFP 97
S+S+ SA + + +++Y ELWHACAGPL ++P++ + V YFPQGH+EQV AS++
Sbjct: 40 SNSTRSAAAERALDPEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAA 99
Query: 98 PIEVPNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDE 157
++P +DL ++ C+V++V L A + DEVY Q+ LLP EA Q E+ +++
Sbjct: 100 EQQMPLYDLPSKLLCRVINVDLKAEADTDEVYAQITLLP---------EANQDEN-AIEK 149
Query: 158 EGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDL 217
E P + H FCKTLTASDTSTHGGFSV RR A++C PPLD +Q P+QELVAKDL
Sbjct: 150 EAPLPPPPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDL 209
Query: 218 HGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPR 277
H EWRFRHI+RGQPRRHLL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++ +
Sbjct: 210 HANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQ 269
Query: 278 NGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPIC 337
+P S++S + + VL+ +A+ST +MF V+Y PR + ++F++P+ +Y++ + N
Sbjct: 270 GNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYS 329
Query: 338 IGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSP 397
IG RFKMRFE +++PE+R G + GI + DP RWP SKWR L VRWDE ++VSP
Sbjct: 330 IGMRFKMRFEGEEAPEQRFTGTIVGIEESDPTRWPKSKWRSLKVRWDETSSIPRPDRVSP 389
Query: 398 WEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGGV---LDFEESVRSSKVLQ 454
W+++ +++ P LS PR K+ R+ + PD + R G +D + S+VLQ
Sbjct: 390 WKVEPALAPPALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMDPLPASGLSRVLQ 449
Query: 455 GQENVGFVSPLYGCDTVNHPLGFEMRAPAHQSLALNGIRKDNIN 498
GQE Y H E AP + + + D ++
Sbjct: 450 GQE--------YSTLRTKHTESVECDAPENSVVWQSSADDDKVD 485
>gi|379323190|gb|AFD01294.1| auxin response factor 2-2 [Brassica rapa subsp. pekinensis]
Length = 851
Score = 404 bits (1037), Expect = e-109, Method: Compositional matrix adjust.
Identities = 195/407 (47%), Positives = 276/407 (67%), Gaps = 14/407 (3%)
Query: 55 SSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCK 113
+++Y ELWHACAGPL ++P++ + V YFPQGH+EQV AS++ ++P +DL +I C+
Sbjct: 52 AALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKILCR 111
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFC 173
V++V L A + DEVY Q+ LLP+P ++ +++E P + H FC
Sbjct: 112 VINVDLKAEADTDEVYAQITLLPEP----------VQDENAIEKESPPPPPPRFQVHSFC 161
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
KTLTASDTSTHGGFSV RR A++C PPLD +Q P+QELVAKDLH EWRFRHI+RGQPR
Sbjct: 162 KTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHASEWRFRHIFRGQPR 221
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
RHLL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++ + +P S++S + +
Sbjct: 222 RHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLG 281
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
VL+ +A+ST +MF V+Y PR + ++F++P+ +Y++ + N IG RFKMRFE +++PE
Sbjct: 282 VLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPE 341
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS 413
+R G + GI D DP RW SKWR L VRWDE ++VSPW+I+ ++S P LS
Sbjct: 342 QRFTGTIVGIEDSDPTRWAKSKWRSLKVRWDETTSIPRPDRVSPWKIEPALSPPALSPVP 401
Query: 414 SPRMKKLRTGLQAPPPDYPVSARGGGV---LDFEESVRSSKVLQGQE 457
PR K+ R+ L PD + R G +D + S+VLQGQE
Sbjct: 402 MPRPKRPRSNLAPSTPDSSMRIREGSSKANMDPLPASGLSRVLQGQE 448
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 64/123 (52%), Positives = 81/123 (65%), Gaps = 6/123 (4%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDV 738
RSCTKV KQG +GR++DL + Y +L++EL+ LF G L P K W I+YTD END+
Sbjct: 725 RSCTKVQKQGIALGRSVDLSKFQNYEELVTELDRLFEFNGELMAPKKDWLIVYTDDENDM 784
Query: 739 MVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGTTDDTQSCL-DQAPVIMEVSVSK-SSSV 796
M+VGDDPW EFC V KI IYT+EEV KM GT SC ++ PV+ E S +K + S
Sbjct: 785 MLVGDDPWQEFCCMVRKIFIYTKEEVRKMNPGTL----SCRNEEEPVVGEGSDAKDAKSA 840
Query: 797 SQP 799
S P
Sbjct: 841 SNP 843
>gi|147791931|emb|CAN67897.1| hypothetical protein VITISV_040395 [Vitis vinifera]
Length = 946
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/418 (47%), Positives = 280/418 (66%), Gaps = 14/418 (3%)
Query: 44 SANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVP 102
S+ S + +++Y ELWHACAGPL ++P++ V YFPQGH+EQV AS++ ++P
Sbjct: 44 SSVSGAGKDFETALYTELWHACAGPLVTVPRERERVFYFPQGHIEQVEASTNQVSDQQMP 103
Query: 103 NFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGR 162
+DL +I C+V++VQL A + DEV+ QV LLP+P ++ ++E
Sbjct: 104 VYDLPSKILCRVINVQLKAEPDTDEVFAQVTLLPEP----------NQDETAQEKEPLPP 153
Query: 163 SPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEW 222
P + H FCKTLTASDTSTHGGFSV RR A++C P LD +Q P+QELVAKDLHG EW
Sbjct: 154 PPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPQLDMSRQPPTQELVAKDLHGNEW 213
Query: 223 RFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPD 282
RFRHI+RGQPRRHLL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++ + +P
Sbjct: 214 RFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPS 273
Query: 283 SILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRF 342
S++S + + VL+ +A ST +MF V+Y PR + A+F++P+ +Y++ + N IG RF
Sbjct: 274 SVISSHSMHLGVLATAWHAKSTGTMFTVYYKPRTSPAEFIVPFDQYMESVKNNYSIGMRF 333
Query: 343 KMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDR 402
KMRFE +++PE+R G + GI D DP RW +SKWRCL VRWDE ++VSPW+I+
Sbjct: 334 KMRFEGEEAPEQRFTGTIVGIEDADPKRWRDSKWRCLKVRWDETSTIPRPDRVSPWKIEP 393
Query: 403 SVSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGG---VLDFEESVRSSKVLQGQE 457
+V+ P L+ PR K+ R+ + PD V R G +D + S+VLQGQE
Sbjct: 394 AVTPPALNPLPVPRPKRPRSNMVPSSPDSSVLTREGSSKVTVDPSPASGFSRVLQGQE 451
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 70/104 (67%), Gaps = 3/104 (2%)
Query: 684 VHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGD 743
VHKQG +GR++DL + N Y++L++EL+ LF G L P K W I+YTD E D+M+VGD
Sbjct: 786 VHKQGIALGRSVDLTKFNNYDELIAELDQLFEFGGELMAPKKNWLIVYTDDEGDMMLVGD 845
Query: 744 DPWHEFCNEVSKIHIYTQEEVEKMTIGTTDDTQSCLDQAPVIME 787
DPW EFC V KI+IYT+EEV++M GT + D P + E
Sbjct: 846 DPWQEFCGMVRKIYIYTREEVQRMNPGTLNSKN---DDNPSVAE 886
>gi|291196865|emb|CAX63113.1| ETTIN protein [Cabomba aquatica]
Length = 744
Score = 403 bits (1035), Expect = e-109, Method: Compositional matrix adjust.
Identities = 218/437 (49%), Positives = 285/437 (65%), Gaps = 17/437 (3%)
Query: 109 QIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKST 168
QI C+VVDV+L A NDE+Y QV+LL + E+ L+ + + G + + ++
Sbjct: 1 QIICRVVDVKLQAEVSNDELYAQVSLLAEDEVGFLDESVVRSLNGGEEVSEENQGIRRTI 60
Query: 169 PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIY 228
PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDY QQRPSQEL AKDL+G WRFRHIY
Sbjct: 61 PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELTAKDLYGFIWRFRHIY 120
Query: 229 RGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSV-QPRNGLPDSILSK 287
RGQPRRHLLTTGWS F ++K L GDAVLFLR DGELRLGIRR+ Q + +P + L
Sbjct: 121 RGQPRRHLLTTGWSSFANKKKLKPGDAVLFLRVDDGELRLGIRRATRQSQCCVPYTGLLC 180
Query: 288 QNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFE 347
Q S N+LS+VA+A+S K +FH++Y+PRA+ A+F++PY KY++ +P +G R K+R E
Sbjct: 181 QLSRVNMLSMVADALSVKKLFHIYYNPRASPAEFMVPYWKYLRSCSHPFSMGMRLKIRVE 240
Query: 348 MDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDR----- 402
+D+ E+R G +TG+ D+DP RWPNSKWRCL+VRWD+ + ++VSPWEI++
Sbjct: 241 TEDAVEKRYTGHITGVGDVDPIRWPNSKWRCLVVRWDDNADTCLHDRVSPWEIEQSSLVS 300
Query: 403 SVSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFV 462
S S P S P+M P PD G G+ ES R KVLQGQE GF+
Sbjct: 301 SFSFPLKSTSKRPKMNFPSIITDIPLPD------GSGLSGSTESSRFQKVLQGQEISGFI 354
Query: 463 SPLYGCDTVN-HPLGFEMRAPAHQSLALNGIRKDNINELVRALPTSYTGFVESNRFPKVL 521
+P +++N +GF+ P + + +R + V + TGF ESNRF KVL
Sbjct: 355 APYNDINSLNDQAVGFQSHYPLPNTGTVGFLRTPSG---VSSDHQQCTGFGESNRFVKVL 411
Query: 522 QGQEICPLRSLTGKVDL 538
QGQE + L ++DL
Sbjct: 412 QGQENVRAKKL-AQIDL 427
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/148 (48%), Positives = 98/148 (66%), Gaps = 6/148 (4%)
Query: 634 PTPTFKANMRSHKDGSFNGTAAGCKLFGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGR 693
P F + M SH+ +F T K+ G L+ + S P R CTKV+KQ SLVGR
Sbjct: 599 PLDIFHSGMTSHQ--TFPPTDP--KISGIHLSPNSG--GSLQPSTRRCTKVYKQESLVGR 652
Query: 694 AIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEV 753
A+DL +L GY+DL+ ELE L +MEGLLRDP KGW+++YTD+ +D+M+VGD+PW EFC+ V
Sbjct: 653 AVDLTKLTGYDDLIFELERLLDMEGLLRDPRKGWQVVYTDNVSDMMLVGDEPWQEFCDIV 712
Query: 754 SKIHIYTQEEVEKMTIGTTDDTQSCLDQ 781
SKIHI+T+EEV + + + C D
Sbjct: 713 SKIHIFTREEVTLASRVKSYEDNCCSDH 740
>gi|307136001|gb|ADN33857.1| auxin response factor-like protein [Cucumis melo subsp. melo]
Length = 840
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/425 (47%), Positives = 282/425 (66%), Gaps = 14/425 (3%)
Query: 37 SSSSSSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSA 95
S+ +S N+ S ++Y ELW+ACAGPL S+P++ V YFPQGH+EQV AS+S
Sbjct: 21 STKDTSDPPNALSPRDADIALYTELWNACAGPLVSVPRENERVFYFPQGHIEQVEASTSQ 80
Query: 96 FPPIEVPNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGV 155
++P ++L +I C+V++V L A E DEV+ Q+ LLP EA Q ++ V
Sbjct: 81 VADQQMPVYNLPSKILCRVINVHLKAEPETDEVFAQITLLP---------EANQ-DEHAV 130
Query: 156 DEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAK 215
D+E P + H FCKTLTASDTSTHGGFSV RR A++C PPLD +Q P+QELVAK
Sbjct: 131 DKEPPPPPPRRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAK 190
Query: 216 DLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQ 275
DLHG EWRFRHI+RGQPRRHLL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++
Sbjct: 191 DLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMR 250
Query: 276 PRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP 335
+P S++S + + VL+ +A+ST +MF V+Y PR + ++F++PY +Y++ I
Sbjct: 251 QHGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPYDQYMESIKKS 310
Query: 336 ICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQV 395
IG RFKMRFE +++PE+R G + G D DP RW +SKWRCL VRWDE E+V
Sbjct: 311 YTIGMRFKMRFEGEEAPEQRFTGTIIGCEDADPKRWKDSKWRCLKVRWDETSTISRPEKV 370
Query: 396 SPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGG---VLDFEESVRSSKV 452
SPW+I+ +++ P L+ R K+ R+ + + PD V R G +D + ++V
Sbjct: 371 SPWKIEPALAPPALNPLPMTRPKRPRSNMVSTSPDSSVLTREGSSRVTVDPSPASVFTRV 430
Query: 453 LQGQE 457
LQGQE
Sbjct: 431 LQGQE 435
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 72/102 (70%)
Query: 670 TPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRI 729
T SQ RSCTKVHKQG +GR++DL R N Y++L++EL+ LF G L P K W I
Sbjct: 706 TCKSQGTSARSCTKVHKQGIALGRSVDLSRFNNYDELVAELDQLFEFGGELLAPKKNWLI 765
Query: 730 LYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGT 771
+YTD E D+M+VGDDPW EFC V KI IYT+EEV+KM G+
Sbjct: 766 VYTDDEGDMMLVGDDPWREFCGMVRKIFIYTREEVQKMNPGS 807
>gi|297793759|ref|XP_002864764.1| hypothetical protein ARALYDRAFT_919450 [Arabidopsis lyrata subsp.
lyrata]
gi|297310599|gb|EFH41023.1| hypothetical protein ARALYDRAFT_919450 [Arabidopsis lyrata subsp.
lyrata]
Length = 858
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/423 (47%), Positives = 284/423 (67%), Gaps = 14/423 (3%)
Query: 39 SSSSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFP 97
S+SS A + + +++Y ELWHACAGPL ++P++ + V YFPQGH+EQV AS++
Sbjct: 36 SNSSRPAAAERAVDPEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAA 95
Query: 98 PIEVPNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDE 157
++P +DL ++ C+V++V L A + DEVY Q+ LLP EA Q E+ +++
Sbjct: 96 EQQMPLYDLPSKLLCRVINVDLKAEADTDEVYAQITLLP---------EANQDEN-AIEK 145
Query: 158 EGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDL 217
E P + H FCKTLTASDTSTHGGFSV RR A++C PPLD +Q P+QELVAKDL
Sbjct: 146 EAPPPPPPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDL 205
Query: 218 HGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPR 277
H EWRFRHI+RGQPRRHLL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++ +
Sbjct: 206 HANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQ 265
Query: 278 NGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPIC 337
+P S++S + + VL+ +A+ST +MF V+Y PR + ++F++P+ +Y++ + N
Sbjct: 266 GNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYS 325
Query: 338 IGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSP 397
IG RFKMRFE +++PE+R G + GI D D RWP SKWR L VRWDE ++VSP
Sbjct: 326 IGMRFKMRFEGEEAPEQRFTGTIVGIEDSDITRWPKSKWRSLKVRWDETSSIPRPDRVSP 385
Query: 398 WEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGGV---LDFEESVRSSKVLQ 454
W+I+ +++ P LS PR K+ R+ + PD + R G +D + S+VLQ
Sbjct: 386 WKIEPALAPPALSPVPMPRPKRPRSNIAPSSPDSSMLTREGTTKANMDPLPASGLSRVLQ 445
Query: 455 GQE 457
GQE
Sbjct: 446 GQE 448
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 65/128 (50%), Positives = 83/128 (64%), Gaps = 5/128 (3%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYT 732
++S RSCTKVHKQG +GR++DL + Y +L++EL+ LF G L P K W I+YT
Sbjct: 727 TKSNSSRSCTKVHKQGIALGRSVDLSKFQNYEELIAELDRLFEFNGELMAPKKDWLIVYT 786
Query: 733 DSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGTTDDTQSCLDQAPVIMEVSVSK 792
D END+M+VGDDPW EFC V KI IYT+EEV KM GT SC + V+ E S +K
Sbjct: 787 DDENDMMLVGDDPWQEFCCMVRKIFIYTKEEVRKMNPGTL----SCRSEEGVVGEGSDAK 842
Query: 793 -SSSVSQP 799
+ S S P
Sbjct: 843 DAKSASNP 850
>gi|301069326|ref|NP_001130681.2| auxin response factor 23 [Zea mays]
gi|295844320|gb|ADG43157.1| auxin response factor 23 [Zea mays]
Length = 680
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 264/656 (40%), Positives = 353/656 (53%), Gaps = 89/656 (13%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSS----AFPPIEVPNFDLQPQIFCKVV 115
ELWHACAG +LP++G+ VVY PQ HL A P VP P + C+VV
Sbjct: 20 ELWHACAGAGVALPRRGSAVVYLPQAHLAAGGCDGGGGLAPAPPRVP-----PHVVCRVV 74
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNL-EAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
DV+L A+ DEVY ++AL+ + G N+ + + E G +E+G G K HMFCK
Sbjct: 75 DVELRADAATDEVYARLALVAMDTMFGRNINDGETEEKNGEEEDGDGEK--KHASHMFCK 132
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLTASDTSTHGGFSVPRRAAEDCFPPLDY+Q RPSQEL+AKDLHG++WRFRHIYRGQPRR
Sbjct: 133 TLTASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGMKWRFRHIYRGQPRR 192
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS F+++K LVSGDAVLFLRG DGELRLG+RR+VQ +N ++ +S +
Sbjct: 193 HLLTTGWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEALLEAVNCTDSKLLM 252
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
LS VAN++ +S+FH+ ++PR ++F++PY K++K + +GTRFK+ E +D+ ER
Sbjct: 253 LSAVANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSLNYHFSVGTRFKVGCENEDANER 312
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSS 414
G++ GI+++DP WP SKW+ L+++WD HQ +VSPW+I+ S ++ + S
Sbjct: 313 SF-GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGVGSSVSVTHRLS 371
Query: 415 PRMKKLRTGLQAPPPDY--PVSARGGGVLDFEESVRSSKVLQGQENV------------- 459
+ K RT L PP D P+ G G D E+ R +VLQGQE V
Sbjct: 372 SSVSK-RTKLCFPPSDLDTPI-LDGNGRPDSVETERFHRVLQGQELVHSSIHGTACSHSS 429
Query: 460 ------GFVSPLYGCDTVNHPLGFEMRAPAHQSLALNGIRKDNINELVRALPTSYTGFVE 513
G + D N + M P H LN GF E
Sbjct: 430 DSPRCQGSYGRRFSADAWNCKMNDVMSGPRH----LNAT----------GFAYQPLGFSE 475
Query: 514 SNRFPKVLQGQEICPLRSLTGKVDLNLGTWGKPNF---GCNSMNMYQASKPNIYPPPSES 570
S +F +VLQGQE+ + P+F NS +P Y S++
Sbjct: 476 SVKFSEVLQGQEM---------------SQAVPSFMRSAFNSGTQNGRVRPFDYVQRSDA 520
Query: 571 LSNMFFPYGDMPKTVQH---------HTMPPYA---SNLQRENVKLNSSSIQMPAIGAEI 618
++P T H TM P+A RE V S + AIG E
Sbjct: 521 TQGYALQQFNLPATEVHSPSSVLMFNQTMVPHAELDGATNREEVH-GSRYLSSNAIGREA 579
Query: 619 RKANLLNEHKPVEN----IPTPTFKANMRSHKDGSFNGTAAG---CKLFGFSLTSE 667
+ + + N + T A R+ + GS G AG CKLFGFSLT +
Sbjct: 580 EPWPSMQQQRASVNGSEPLDTTEASAPARNAESGSV-GRGAGRSNCKLFGFSLTEK 634
>gi|407971008|ref|NP_001233765.1| auxin response factor 2 [Solanum lycopersicum]
gi|85069279|gb|ABC69711.1| auxin response factor 2 [Solanum lycopersicum]
Length = 846
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 204/443 (46%), Positives = 281/443 (63%), Gaps = 29/443 (6%)
Query: 33 YLNSSSSSSSCSANSSSSSSLS-----SSIYFELWHACAGPLTSLPKKGNVVVYFPQGHL 87
Y S S S SSS + +++Y ELW +CAGPL ++P++G +V YFPQGH+
Sbjct: 11 YSEPSDGSRPVSETGRSSSGVGIVDADTALYTELWRSCAGPLVTVPREGELVYYFPQGHI 70
Query: 88 EQV-ASSSAFPPIEVPNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLE 146
EQV AS++ ++P ++L +I C+VV+V L A + DEVY QV L+P+P
Sbjct: 71 EQVEASTNQVADQQMPLYNLPSKILCRVVNVLLKAEPDTDEVYAQVTLMPEPNQ------ 124
Query: 147 AKQLEDLGVDEEGGGRSPTKSTP-----HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPL 201
DE + P + P H FCKTLTASDTSTHGGFSV RR A++C P L
Sbjct: 125 ---------DENAVKKEPMRPPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPQL 175
Query: 202 DYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRG 261
D +Q P+QELVAKDLHG EWRFRHI+RGQPRRHLL +GWS+FVS K LV+GDA +FLRG
Sbjct: 176 DMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRG 235
Query: 262 KDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADF 321
++GELR+G+RR+++ + P S++S + + VL+ +A+ TK+MF V+Y PR + A+F
Sbjct: 236 ENGELRVGVRRAMRQQGNAPSSVISSHSMHLGVLATAWHAIQTKTMFTVYYKPRTSPAEF 295
Query: 322 VIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMV 381
++PY Y++ + N IG RFKMRFE +++PE+R G + GI D DP RW SKWRCL V
Sbjct: 296 IVPYDHYMESVKNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDADPQRWLESKWRCLKV 355
Query: 382 RWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGG--- 438
RWDE ++VSPW+I+ ++S P L++ R K+ R+ + PD V R G
Sbjct: 356 RWDENSSIPRPDRVSPWKIEPALSPPALNVPPVARPKRPRSSILPTSPDSSVLTREGSSR 415
Query: 439 GVLDFEESVRSSKVLQGQENVGF 461
D ++ +VLQGQE F
Sbjct: 416 ATADHSQASGFPRVLQGQELSTF 438
Score = 129 bits (324), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 104/183 (56%), Gaps = 10/183 (5%)
Query: 592 PYASNLQRENVKLNSSSIQMPAIGAEIRKANLLNEHKPVENIPTPTFKANMRSHKDGSFN 651
P SN+ + V + SS+ PA I P +++ T + + + +S +
Sbjct: 637 PLTSNVCTDAVMMRKSSLIDPASDMNIGI-------HPHQSLATDSDQRSEQSKGSKVDD 689
Query: 652 GTAAG---CKLFGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLS 708
G AA + F L + S RSCTKVHKQG+ +GR++DL + N Y++L++
Sbjct: 690 GVAANDHDKQFHTFHLAARDKDGKGHSSSTRSCTKVHKQGTALGRSVDLAKFNNYDELIA 749
Query: 709 ELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
EL+ LF+ G L+ +K W ++YTD E D+M+VGDDPW EFC V KI IYT+EEV++M
Sbjct: 750 ELDQLFDFNGELKARSKSWLVVYTDDEGDMMLVGDDPWQEFCGMVRKIFIYTKEEVQRMN 809
Query: 769 IGT 771
GT
Sbjct: 810 PGT 812
>gi|379323196|gb|AFD01297.1| auxin response factor 3-2 [Brassica rapa subsp. pekinensis]
Length = 552
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 238/495 (48%), Positives = 294/495 (59%), Gaps = 89/495 (17%)
Query: 45 ANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNF 104
AN SSSSS SS + ELWHACAGPL SLPK+G++V+YFPQGHLEQ A P +
Sbjct: 36 ANGSSSSSSSSGVCLELWHACAGPLISLPKRGSLVLYFPQGHLEQQA-----PGFSAAIY 90
Query: 105 DLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDL-----GVDEEG 159
L P +FC+++DV+L A + DEVY QV+LLP+ E ++E K E + G D+E
Sbjct: 91 GLPPHVFCRILDVKLHAETDTDEVYAQVSLLPESE----DIERKLREGVIDVVDGGDQED 146
Query: 160 GGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHG 219
+TPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDY + RPSQEL+A+DLHG
Sbjct: 147 YEVVKRSNTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYSKPRPSQELLARDLHG 206
Query: 220 VEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNG 279
+EWRFRHIYRGQPRRHLLTTGWS FV++K LVSGDAVLFLRG DG+LRLG+RR+ Q
Sbjct: 207 LEWRFRHIYRGQPRRHLLTTGWSGFVNKKKLVSGDAVLFLRGDDGKLRLGVRRASQFEGA 266
Query: 280 LPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIG 339
S QN+ N S VA+A+ST S F+++Y+P++
Sbjct: 267 SAFSAQYNQNTNHNNFSEVAHAISTNSAFNIYYNPKSL---------------------- 304
Query: 340 TRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWE 399
G++TGI+DLDP RWP SKWRCL+VRWD+ + HQ++VSPWE
Sbjct: 305 ------------------GIITGISDLDPIRWPGSKWRCLIVRWDDNEANRHQQRVSPWE 346
Query: 400 IDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENV 459
I+ S S+ + K+ R G PD PVS G DFEES+R +VLQGQE
Sbjct: 347 IEPSGSISSSGSFMTTGPKRSRIGF----PDIPVS-EGIHATDFEESLRFQRVLQGQEKF 401
Query: 460 -GFVSPLYGCDTVNHPLGFEMRAPAHQSLALNGIRKDNINELVRALPTSYTGFVESNRFP 518
GF++ S G R+ T F +S F
Sbjct: 402 PGFINT--------------------SSDGGAGARRGRFKG---------TEFGDSYGFH 432
Query: 519 KVLQGQEICPLRSLT 533
KVLQGQE P S+T
Sbjct: 433 KVLQGQETVPAYSMT 447
>gi|30027167|gb|AAP06759.1| auxin response factor-like protein [Mangifera indica]
Length = 840
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/430 (46%), Positives = 285/430 (66%), Gaps = 19/430 (4%)
Query: 34 LNSSSSSSSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-AS 92
+ SS+ +S +L +++Y ELWHACAGPL ++P++G V YFPQGH+EQV AS
Sbjct: 11 IKSSNETSKSPMEEDKDLNLETALYKELWHACAGPLVTVPRQGERVYYFPQGHIEQVEAS 70
Query: 93 SSAFPPIEVPNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLED 152
++ F ++P +DL+ +I C+V++VQL A + DEV+ Q+ LLP+P ++
Sbjct: 71 TNQFADQQMPIYDLRSKILCRVINVQLKAKPDTDEVFAQITLLPEP----------NQDE 120
Query: 153 LGVDEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQEL 212
V++E + H FCKTLTASDTSTHGGFSV RR AE+C P LD QQ P+Q+L
Sbjct: 121 NAVEKEPPPPLLPRFHVHSFCKTLTASDTSTHGGFSVLRRHAEECLPELDMSQQPPTQDL 180
Query: 213 VAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRR 272
VAKDLHG EWRFRHI+RGQPRRHLL +GWS+FVS K LV+GDA +FLR + ELR+G+RR
Sbjct: 181 VAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRC-EKELRVGVRR 239
Query: 273 SVQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKII 332
+++ + +P S++S + + VL+ +AVST +MF V+Y PR + A+F++P+ +Y++ +
Sbjct: 240 AMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRISPAEFIVPFDQYMESV 299
Query: 333 MNPICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQ 392
+ IG F+MRFE +++PE+R G + GI D DP RWP+SKWRCL VRWDE
Sbjct: 300 KSNYSIGMGFEMRFEGEEAPEQRYTGTIVGIEDADPQRWPDSKWRCLKVRWDETSTVPRP 359
Query: 393 EQVSPWEIDRSVSLPPLSIQSSP--RMKKLRTGLQAPPPDYPVSARGGGV---LDFEESV 447
E+VSPW+I+ +L PL++ P R K+ R+ + PD V R G +D +
Sbjct: 360 ERVSPWKIE--PALAPLALNPLPLSRPKRPRSNMVPSSPDSSVLTREGSFKVNVDPSSAT 417
Query: 448 RSSKVLQGQE 457
S+VLQGQE
Sbjct: 418 GFSRVLQGQE 427
Score = 126 bits (316), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 56/99 (56%), Positives = 71/99 (71%)
Query: 674 QSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTD 733
QS RSCTKVHKQG +GR++DL + N Y +L++EL+ LF G L P K W I+YTD
Sbjct: 709 QSGSSRSCTKVHKQGIALGRSVDLSKFNNYEELIAELDRLFEFGGELMTPKKNWLIIYTD 768
Query: 734 SENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGTT 772
E D+M+VGDDPW EFC V KI IYT+EEV+KM G++
Sbjct: 769 DEGDIMLVGDDPWKEFCGMVRKIFIYTREEVQKMKPGSS 807
>gi|449440496|ref|XP_004138020.1| PREDICTED: auxin response factor 2-like [Cucumis sativus]
Length = 839
Score = 401 bits (1030), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/435 (46%), Positives = 284/435 (65%), Gaps = 14/435 (3%)
Query: 27 NSGCVCYLNSSSSSSSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGH 86
NS S+ +S N+ S ++Y ELW+ACAGPL S+P++ V YFPQGH
Sbjct: 11 NSASFNDHADSTKDTSDPPNALSPRDADIALYTELWNACAGPLVSVPRENERVFYFPQGH 70
Query: 87 LEQV-ASSSAFPPIEVPNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNL 145
+EQV AS+S ++P ++L +I C+V++V L A + DEV+ Q+ LLP
Sbjct: 71 IEQVEASTSQVADQQMPVYNLPSKILCRVINVHLKAEPDTDEVFAQITLLP--------- 121
Query: 146 EAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQ 205
EA Q ++ VD+E P + H FCKTLTASDTSTHGGFSV RR A++C PPLD +
Sbjct: 122 EANQ-DEHAVDKEPPPPPPRRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSR 180
Query: 206 QRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGE 265
Q P+QELVAKDLHG EWRFRHI+RGQPRRHLL +GWS+FVS K LV+GDA +FLRG++GE
Sbjct: 181 QPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGE 240
Query: 266 LRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPY 325
LR+G+RR+++ +P S++S + + VL+ +A+ST ++F V+Y PR + ++F++PY
Sbjct: 241 LRVGVRRAMRQHGNVPSSVISSHSMHLGVLATAWHAISTGTLFTVYYKPRTSPSEFIVPY 300
Query: 326 QKYVKIIMNPICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDE 385
+Y++ I IG RFKMRFE +++PE+R G + G D DP RW +SKWRCL VRWDE
Sbjct: 301 DQYMESIKKSYTIGMRFKMRFEGEEAPEQRFTGTIIGCEDADPKRWKDSKWRCLKVRWDE 360
Query: 386 CIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGG---VLD 442
E+VSPW+I+ +++ P L+ R K+ R+ + + PD V R G +D
Sbjct: 361 TSTISRPEKVSPWKIEPALAPPALNPLPMTRPKRPRSNMVSTSPDSSVLTREGSSRVTVD 420
Query: 443 FEESVRSSKVLQGQE 457
+ ++VLQGQE
Sbjct: 421 PSPASAFTRVLQGQE 435
Score = 128 bits (322), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/138 (50%), Positives = 90/138 (65%), Gaps = 8/138 (5%)
Query: 670 TPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRI 729
T SQ RSCTKVHKQG +GR++DL R N Y++L++EL+ LF G L+ P K W I
Sbjct: 705 TCKSQGTSARSCTKVHKQGIALGRSVDLSRFNNYDELVAELDQLFEFGGELQAPKKNWLI 764
Query: 730 LYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGTTDDTQSCLDQAPVI--ME 787
+YTD E D+M+VGDDPW EFC V KI IYT+EEV+KM G+ + D+ P + E
Sbjct: 765 VYTDDEGDMMLVGDDPWREFCGMVRKIFIYTREEVQKMNPGSLNLKG---DENPSVEGEE 821
Query: 788 VSVSKSSSV---SQPDSS 802
V +KS +V S P+SS
Sbjct: 822 VKETKSQAVPSMSAPESS 839
>gi|47716275|emb|CAG30068.1| putative auxin response factor [Brassica napus]
Length = 848
Score = 400 bits (1029), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/466 (43%), Positives = 293/466 (62%), Gaps = 24/466 (5%)
Query: 55 SSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCK 113
+++Y ELWHACAGPL ++P++ + V YFPQGH+EQV AS++ ++P +DL +I C+
Sbjct: 51 AALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKILCR 110
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFC 173
V++V L A + DEVY Q+ LLP+P ++ +++E P + H FC
Sbjct: 111 VINVDLKAEADTDEVYAQITLLPEP----------VQDENSIEKEAPPPPPPRFQVHSFC 160
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
KTLTASDTSTHGGFSV RR A++C PPLD +Q P+QELVAKDLH EWRFRHI+RGQPR
Sbjct: 161 KTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHASEWRFRHIFRGQPR 220
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
RHLL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++ + +P S++S + +
Sbjct: 221 RHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLG 280
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
VL+ +A+ST +MF V+Y PR + ++F++P+ +Y + + IG RFKMRFE +++PE
Sbjct: 281 VLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYTESVKINYSIGMRFKMRFEGEEAPE 340
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS 413
+R G + GI D DP RW SKWR L VRWDE ++VSPW+I+ ++S P LS
Sbjct: 341 QRFTGTIVGIEDSDPTRWAKSKWRSLKVRWDETTSIPRPDRVSPWKIEPALSPPALSPVP 400
Query: 414 SPRMKKLRTGLQAPPPDYPVSARGGGV---LDFEESVRSSKVLQGQENVGFVSPLYGCDT 470
PR K+ R+ L + PD + R G +D + S+VLQGQE Y
Sbjct: 401 MPRPKRPRSNLASSTPDSSMRIREGSSKANMDPLPASGLSRVLQGQE--------YPTLR 452
Query: 471 VNHPLGFEMRAPAHQSLALNGIRKDNINELVRALPTSYTGFVESNR 516
H E AP + + + D ++ V + Y ++ S R
Sbjct: 453 TKHVESVECDAPENSVVWQSSTDDDKVD--VISASRRYENWISSGR 496
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/124 (50%), Positives = 80/124 (64%), Gaps = 8/124 (6%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDV 738
RSCTKV KQG +GR++DL + Y +L++EL+ LF G L P K W I+YTD END+
Sbjct: 722 RSCTKVQKQGIALGRSVDLSKFQNYEELVTELDRLFEFNGELMAPKKDWLIVYTDDENDM 781
Query: 739 MVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGTTDDTQSCL--DQAPVIMEVSVSK-SSS 795
M+VGDDPW EFC V KI IYT+EEV KM GT C ++ PV+ E S +K + S
Sbjct: 782 MLVGDDPWQEFCCMVRKIFIYTKEEVRKMNPGTL-----CCRNEEEPVVGEGSDAKDAKS 836
Query: 796 VSQP 799
S P
Sbjct: 837 ASNP 840
>gi|312282635|dbj|BAJ34183.1| unnamed protein product [Thellungiella halophila]
Length = 854
Score = 400 bits (1029), Expect = e-108, Method: Compositional matrix adjust.
Identities = 194/407 (47%), Positives = 278/407 (68%), Gaps = 14/407 (3%)
Query: 55 SSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCK 113
+++Y ELWHACAGPL ++P++ + V YFPQGH+EQV AS++ ++P +DL ++ C+
Sbjct: 56 AALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLCR 115
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFC 173
V++V L A + DEVY Q+ LLP+P Q E++ +++E P + H FC
Sbjct: 116 VINVDLKAEADTDEVYAQITLLPEP---------NQDENV-IEKETPPPPPPRFQVHSFC 165
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
KTLTASDTSTHGGFSV RR A++C PPLD +Q P+QELVAKDLH EWRFRHI+RGQPR
Sbjct: 166 KTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHANEWRFRHIFRGQPR 225
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
RHLL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++ + +P S++S + +
Sbjct: 226 RHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLG 285
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
VL+ +A+ST +MF V+Y PR + ++F++P+ +Y++ + N IG RFKMRFE +++PE
Sbjct: 286 VLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPE 345
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS 413
+R G + GI D DP RW SKWR L VRWDE ++VSPW+I+ +++ P LS
Sbjct: 346 QRFTGTIVGIEDSDPTRWAKSKWRSLKVRWDETSSIPRPDRVSPWKIEPALAPPALSPVP 405
Query: 414 SPRMKKLRTGLQAPPPDYPVSARGGGV---LDFEESVRSSKVLQGQE 457
PR K+ R+ + PD + R G +D + S+VLQGQE
Sbjct: 406 MPRPKRPRSNIAPSSPDSSMLQREGSTKANMDPLPASGLSRVLQGQE 452
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 55/93 (59%), Positives = 66/93 (70%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDV 738
RSCTKVHKQG +GR++DL + Y +L++EL+ LF G L P K W I+YTD END+
Sbjct: 728 RSCTKVHKQGIALGRSVDLSKFQNYEELIAELDRLFEFNGELMAPKKDWLIVYTDDENDM 787
Query: 739 MVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGT 771
M VGDDPW EFC V KI IYT+EEV KM GT
Sbjct: 788 MRVGDDPWQEFCCMVRKIFIYTKEEVRKMNPGT 820
>gi|449531444|ref|XP_004172696.1| PREDICTED: auxin response factor 2-like, partial [Cucumis sativus]
Length = 718
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/435 (46%), Positives = 284/435 (65%), Gaps = 14/435 (3%)
Query: 27 NSGCVCYLNSSSSSSSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGH 86
NS S+ +S N+ S ++Y ELW+ACAGPL S+P++ V YFPQGH
Sbjct: 11 NSASFNDHADSTKDTSDPPNALSPRDADIALYTELWNACAGPLVSVPRENERVFYFPQGH 70
Query: 87 LEQV-ASSSAFPPIEVPNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNL 145
+EQV AS+S ++P ++L +I C+V++V L A + DEV+ Q+ LLP
Sbjct: 71 IEQVEASTSQVADQQMPVYNLPSKILCRVINVHLKAEPDTDEVFAQITLLP--------- 121
Query: 146 EAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQ 205
EA Q ++ VD+E P + H FCKTLTASDTSTHGGFSV RR A++C PPLD +
Sbjct: 122 EANQ-DEHAVDKEPPPPPPRRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSR 180
Query: 206 QRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGE 265
Q P+QELVAKDLHG EWRFRHI+RGQPRRHLL +GWS+FVS K LV+GDA +FLRG++GE
Sbjct: 181 QPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGE 240
Query: 266 LRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPY 325
LR+G+RR+++ +P S++S + + VL+ +A+ST ++F V+Y PR + ++F++PY
Sbjct: 241 LRVGVRRAMRQHGNVPSSVISSHSMHLGVLATAWHAISTGTLFTVYYKPRTSPSEFIVPY 300
Query: 326 QKYVKIIMNPICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDE 385
+Y++ I IG RFKMRFE +++PE+R G + G D DP RW +SKWRCL VRWDE
Sbjct: 301 DQYMESIKKSYTIGMRFKMRFEGEEAPEQRFTGTIIGCEDADPKRWKDSKWRCLKVRWDE 360
Query: 386 CIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGG---VLD 442
E+VSPW+I+ +++ P L+ R K+ R+ + + PD V R G +D
Sbjct: 361 TSTISRPEKVSPWKIEPALAPPALNPLPMTRPKRPRSNMVSTSPDSSVLTREGSSRVTVD 420
Query: 443 FEESVRSSKVLQGQE 457
+ ++VLQGQE
Sbjct: 421 PSPASAFTRVLQGQE 435
>gi|225425242|ref|XP_002268849.1| PREDICTED: auxin response factor 2-like [Vitis vinifera]
Length = 769
Score = 400 bits (1028), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/406 (49%), Positives = 271/406 (66%), Gaps = 14/406 (3%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKV 114
++Y ELWHACAGPL ++P+ G V YFPQGHLEQV AS++ ++P +DL+ +I C+V
Sbjct: 9 ALYKELWHACAGPLVTVPRVGERVFYFPQGHLEQVEASTNQVADQQMPAYDLRAKILCRV 68
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
++V L A + DEV+ QV LLP+P KQ E+ E+ +P + H FCK
Sbjct: 69 INVHLKAESDTDEVFAQVTLLPEP---------KQDENSAEKEDVLTPTP-RPRVHSFCK 118
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLTASDTSTHGGFSV RR A++C PPLD +Q P+QELVAKDLHG EWRFRHI+RGQPRR
Sbjct: 119 TLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRR 178
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++ + P S++S + + V
Sbjct: 179 HLLQSGWSLFVSSKKLVAGDAFIFLRGENGELRVGVRRAMRQLSNGPSSVISSHSMHLGV 238
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
L+ +AVST ++F V+Y PR + A+F+IP+ +Y++ + N IG RFKM+FE +++PE+
Sbjct: 239 LATAWHAVSTGTIFTVYYKPRTSPAEFIIPFDQYMEAVKNHYSIGMRFKMKFEGEEAPEQ 298
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSS 414
R G V G D DP RWP SKWRCL VRWDE E VSPW I+ +++ P L+
Sbjct: 299 RFTGTVIGTEDADPMRWPGSKWRCLKVRWDETSSVPRPECVSPWNIEVALTPPSLNPLPV 358
Query: 415 PRMKKLRTGLQAPPPDYPVSARGG---GVLDFEESVRSSKVLQGQE 457
R K+ R + + + V R G +D S+ LQGQE
Sbjct: 359 SRSKRPRANMMSSSTESSVLTREGLSKVTIDHSPGSGFSRALQGQE 404
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 66/89 (74%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDV 738
RSC KVHKQG VGR++DL + NGY +L+SEL+ +F G L K W I++TD E D+
Sbjct: 638 RSCIKVHKQGIAVGRSVDLTKFNGYTELISELDQIFEFNGELISLNKDWLIVFTDDEGDM 697
Query: 739 MVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
M+VGDDPW EFC+ V KI +YT+EE+++M
Sbjct: 698 MLVGDDPWPEFCSMVRKIFVYTREEIQRM 726
>gi|224136320|ref|XP_002322300.1| predicted protein [Populus trichocarpa]
gi|222869296|gb|EEF06427.1| predicted protein [Populus trichocarpa]
Length = 852
Score = 400 bits (1027), Expect = e-108, Method: Compositional matrix adjust.
Identities = 203/407 (49%), Positives = 280/407 (68%), Gaps = 14/407 (3%)
Query: 55 SSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCK 113
+++Y ELWHACAGPL ++P++G+ V YFPQGH+EQV AS++ ++P ++L P+I C+
Sbjct: 50 TALYNELWHACAGPLVTVPREGDRVFYFPQGHIEQVEASTNQVADQQMPLYNLLPKILCR 109
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFC 173
VV+VQL A + DEV+ QV LLP E Q E + +++E P + H FC
Sbjct: 110 VVNVQLKAEPDTDEVFAQVTLLP---------EHNQDESV-LEKEPPPPPPPRFHVHSFC 159
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
KTLTASDTSTHGGFSV RR A++C PPLD +Q P+QELVAKDLHG EWRFRHI+RGQPR
Sbjct: 160 KTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPR 219
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
RHLL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++ + +P S++S + +
Sbjct: 220 RHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISSHSMHLG 279
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
VL+ +AVST ++F V+Y PR + A+F++P+ +Y++ + N IG RFKMRFE +++PE
Sbjct: 280 VLATAWHAVSTGTLFTVYYKPRTSPAEFIVPFDQYMESVKNNYSIGMRFKMRFEGEEAPE 339
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS 413
+R G + GI D DP RW NSKWRCL VRWDE E+VSPW+I+ +++ P L+
Sbjct: 340 QRFTGTIVGIEDADPGRWKNSKWRCLKVRWDETSTMPRPERVSPWKIEPALAPPALNPLP 399
Query: 414 SPRMKKLRTGLQAPPPDYPVSARGGG---VLDFEESVRSSKVLQGQE 457
PR K+ R + PD V R G D + S+VLQGQE
Sbjct: 400 LPRPKRPRANMVPSSPDSSVLTRDGSFKVTADPPSASGFSRVLQGQE 446
Score = 118 bits (295), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/216 (36%), Positives = 112/216 (51%), Gaps = 10/216 (4%)
Query: 563 IYPPPSESLSNMFFPYGDMPKTV---QHHTMPPYASNLQRENVKLNSSSIQMP-AIGAEI 618
++PPPS N MPK V +H + N + + L S P A G I
Sbjct: 605 MHPPPSH-FDNHANSRELMPKPVLMQEHDSGKSLEGNCKLFGIPLKISKPVAPEAAGTTI 663
Query: 619 RKANLLNEHKPVENIPTPTFKANMRSHKDGSFNGTAAGCKLFGFS---LTSETPTPSSQS 675
L+ +PV + TF+++ +S + T F L ++ +Q+
Sbjct: 664 TMNEPLSHIQPVSH--QLTFESDQKSEQSKGSKMTDENENEKPFQAGHLRTKDNHGKAQN 721
Query: 676 PGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSE 735
RSCTKVHKQG +GR++DL + N Y++L++EL+ LF G L P K W I+YTD E
Sbjct: 722 GSTRSCTKVHKQGIALGRSVDLAKFNNYDELIAELDRLFEFNGELMAPQKNWLIVYTDDE 781
Query: 736 NDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGT 771
+D+M+VGDDPW EF V KI IYT+EE +K+ G
Sbjct: 782 DDMMLVGDDPWQEFVGMVRKIVIYTKEEAQKIKPGA 817
>gi|296088177|emb|CBI35669.3| unnamed protein product [Vitis vinifera]
Length = 767
Score = 399 bits (1026), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/406 (49%), Positives = 271/406 (66%), Gaps = 14/406 (3%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKV 114
++Y ELWHACAGPL ++P+ G V YFPQGHLEQV AS++ ++P +DL+ +I C+V
Sbjct: 9 ALYKELWHACAGPLVTVPRVGERVFYFPQGHLEQVEASTNQVADQQMPAYDLRAKILCRV 68
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
++V L A + DEV+ QV LLP+P KQ E+ E+ +P + H FCK
Sbjct: 69 INVHLKAESDTDEVFAQVTLLPEP---------KQDENSAEKEDVLTPTP-RPRVHSFCK 118
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLTASDTSTHGGFSV RR A++C PPLD +Q P+QELVAKDLHG EWRFRHI+RGQPRR
Sbjct: 119 TLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGNEWRFRHIFRGQPRR 178
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++ + P S++S + + V
Sbjct: 179 HLLQSGWSLFVSSKKLVAGDAFIFLRGENGELRVGVRRAMRQLSNGPSSVISSHSMHLGV 238
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
L+ +AVST ++F V+Y PR + A+F+IP+ +Y++ + N IG RFKM+FE +++PE+
Sbjct: 239 LATAWHAVSTGTIFTVYYKPRTSPAEFIIPFDQYMEAVKNHYSIGMRFKMKFEGEEAPEQ 298
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSS 414
R G V G D DP RWP SKWRCL VRWDE E VSPW I+ +++ P L+
Sbjct: 299 RFTGTVIGTEDADPMRWPGSKWRCLKVRWDETSSVPRPECVSPWNIEVALTPPSLNPLPV 358
Query: 415 PRMKKLRTGLQAPPPDYPVSARGG---GVLDFEESVRSSKVLQGQE 457
R K+ R + + + V R G +D S+ LQGQE
Sbjct: 359 SRSKRPRANMMSSSTESSVLTREGLSKVTIDHSPGSGFSRALQGQE 404
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 66/89 (74%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDV 738
RSC KVHKQG VGR++DL + NGY +L+SEL+ +F G L K W I++TD E D+
Sbjct: 638 RSCIKVHKQGIAVGRSVDLTKFNGYTELISELDQIFEFNGELISLNKDWLIVFTDDEGDM 697
Query: 739 MVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
M+VGDDPW EFC+ V KI +YT+EE+++M
Sbjct: 698 MLVGDDPWPEFCSMVRKIFVYTREEIQRM 726
>gi|125572056|gb|EAZ13571.1| hypothetical protein OsJ_03487 [Oryza sativa Japonica Group]
Length = 668
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 270/661 (40%), Positives = 356/661 (53%), Gaps = 50/661 (7%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAGP+ SLP++G+ VVY PQGHL + EV L P + C+VVDV+L
Sbjct: 25 DLWHACAGPVVSLPRRGSAVVYLPQGHLSAAGAGGGIRG-EVA-VALPPHVACRVVDVEL 82
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
+ E + +L + L G +E + + G +E HMFCKTLTAS
Sbjct: 83 CVS-EPLSLVVGFSLYLRGTLHGGGIEREDDMEDGDEER------KSRMLHMFCKTLTAS 135
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
DTSTHGGFSVPRRAAEDCFPPLD+KQ RPSQELVAKDLHG +WRFRHIYRGQPRRHLLTT
Sbjct: 136 DTSTHGGFSVPRRAAEDCFPPLDHKQLRPSQELVAKDLHGAKWRFRHIYRGQPRRHLLTT 195
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVA 299
GWS FV++K LVSGDAVLFLRG DGELRLG+RR+ Q +N S ++S LS VA
Sbjct: 196 GWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRATQLKNEAIFKAFSSESSKMRTLSAVA 255
Query: 300 NAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCNGV 359
+++ S+FH+ Y+PRAT +++V+PY K+VK +P+CIG RFK FE +D ERR +G+
Sbjct: 256 DSLKHGSVFHICYNPRATASEYVVPYWKFVKSFNHPVCIGMRFKFHFESEDVNERR-SGM 314
Query: 360 VTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID---RSVSLP-PLSIQSSP 415
+ G++++DP RWP SKWR L+VRW++ + Q +VSPWEI+ S+S+ LS SS
Sbjct: 315 IAGVSEVDPIRWPGSKWRSLLVRWEDATDCNSQNRVSPWEIEIVGGSISVAHSLSASSSK 374
Query: 416 RMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHPL 475
R K G P Y G G D E+ + +VLQGQE +G + C + +
Sbjct: 375 RTKLCPQGNLDVPALY-----GNGRPDSVETEKFPRVLQGQELMGSRTHRATCSPQSIDI 429
Query: 476 GFEMRAPAHQSLALNGIRKDNINELVRALPTSYTG-------FVESNRFPKVLQGQEIC- 527
A + L R + LP Y+G F ES FP+VLQGQEI
Sbjct: 430 TKSKSFDAWR--FLTDTRSCMLGSSTSRLPVQYSGYTHQSVSFGESIGFPEVLQGQEISQ 487
Query: 528 ---PLRSLTGKVDLNLGTWGKPNFGCNSMNMYQASKPNIYPPPSESLSNMFFPYGDMPKT 584
P + + + N+ C M S N LS P
Sbjct: 488 TVPPFQGMLPDACSAKSRYELKNYVCTPATMNGLSSAN----EGYCLSLSTVPPSPPSSL 543
Query: 585 VQHHTMPPYASNLQRENVKLNSSSIQMPAIGAEIRKANLLNEHKPVE-NIPTPTFKANMR 643
+ + T P + N K + S PA +R+ LL+E + I + N
Sbjct: 544 MLYQTGVPQLELASKNNDKSGNDS--QPA----LRQHKLLSETSWDQFKIGKASTPGNAT 597
Query: 644 SHKDGSFNGTAAGCKLFGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGY 703
+G C+LFGFSLT E P+ + K + Q R +DL+ GY
Sbjct: 598 KPGNGGREVDRTSCRLFGFSLT-EKIIPTDKDGEKEVSYETDCQNP---RMLDLF---GY 650
Query: 704 N 704
N
Sbjct: 651 N 651
>gi|356527524|ref|XP_003532359.1| PREDICTED: auxin response factor 2-like [Glycine max]
Length = 851
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 204/437 (46%), Positives = 287/437 (65%), Gaps = 15/437 (3%)
Query: 24 GKNNSGCVCYLNSSSSSSSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFP 83
G N+SG NS + + S++SSS+ +++Y ELWHACAGPL ++P++ V YFP
Sbjct: 17 GDNSSGDA--RNSGGEAQNASSSSSSARDAEAALYRELWHACAGPLVTVPRERERVFYFP 74
Query: 84 QGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEG 142
QGH+EQV AS++ +P +DL P+I C+V++V L A + DEV+ QV LLP+P
Sbjct: 75 QGHIEQVEASTNQVAEQHMPVYDLPPKILCRVINVMLKAEPDTDEVFAQVTLLPEP---- 130
Query: 143 LNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLD 202
++ V++EG P + H FCKTLTASDTSTHGGFSV RR A++C PPLD
Sbjct: 131 ------NQDENAVEKEGPPAPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLD 184
Query: 203 YKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGK 262
+Q P+QELVAKDLH EWRFRHI+RGQPRRHLL +GWS+FVS K LV+GDA +FLRG+
Sbjct: 185 MSKQPPTQELVAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGE 244
Query: 263 DGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFV 322
+GELR+G+RR+++ + +P S++S + + VL+ +A+ T +MF V+Y PR + A+F+
Sbjct: 245 NGELRVGVRRAMRQQGNVPSSVISSHSMHLGVLATAWHAILTGTMFTVYYKPRTSPAEFI 304
Query: 323 IPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVR 382
+PY +Y++ + N IG RFKMRFE +++PE+R G + GI D D RWP SKWR L VR
Sbjct: 305 VPYDQYMESLKNNYTIGMRFKMRFEGEEAPEQRFTGTIVGIEDADTKRWPKSKWRSLKVR 364
Query: 383 WDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGGVLD 442
WDE E+VS W+I+ +++ L+ PR K+ R+ + PD V R +
Sbjct: 365 WDETSNIPRPERVSQWKIEPALAPLALNPLPMPRPKRPRSNVVPSSPDSSVLTREASKVS 424
Query: 443 FEESVRS--SKVLQGQE 457
+ S +VLQGQE
Sbjct: 425 VDPLPTSGFQRVLQGQE 441
Score = 117 bits (294), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 79/120 (65%), Gaps = 4/120 (3%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYT 732
S S RSCTKVHK+G +GR++DL + + Y +L++EL+ LF G L P K W I+YT
Sbjct: 721 SHSGSARSCTKVHKKGIALGRSVDLTKFSDYGELITELDQLFEFGGELTSPQKDWLIVYT 780
Query: 733 DSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGT----TDDTQSCLDQAPVIMEV 788
D+E D+M+VGDDPW EF V KI+IY +EE++KM+ GT ++ QS + A E+
Sbjct: 781 DNEGDMMLVGDDPWQEFVAMVRKIYIYPKEEIQKMSPGTLSSKNEENQSASEGAADAQEI 840
>gi|413952425|gb|AFW85074.1| hypothetical protein ZEAMMB73_374158 [Zea mays]
Length = 683
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 219/478 (45%), Positives = 295/478 (61%), Gaps = 28/478 (5%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
ELWHACAGP+ +LP++G++VVY PQGHL DL P + C+V DV+L
Sbjct: 24 ELWHACAGPVVALPRRGSLVVYLPQGHLAAAGGGDV-------AADLPPHVVCRVADVEL 76
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQ------LEDLGVDEEGGGRSPTKSTPHMFC 173
A+ DEV ++AL+ + E G NL +ED + + G HMFC
Sbjct: 77 CADAATDEVCARLALVAEGEAFGRNLGGGGVEGDDGMEDFDAERKSG-------MLHMFC 129
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
KTLTASDTSTHGGFSVPRRAAEDCFPPLDY Q RPSQELVAKDLHG +W+FRHIYRGQPR
Sbjct: 130 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRHIYRGQPR 189
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
RHLLTTGWS FV++K LVSGDAVLFLRG DGELRLG+RR++Q +N + ++ +
Sbjct: 190 RHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALFEDFNSDSTKRH 249
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
L+ VA+++ +S+FH+ Y+PRAT ++++IPY K++K + +P+CIG R + +D E
Sbjct: 250 SLTAVADSLKNRSVFHISYNPRATASEYIIPYAKFLKSLNHPVCIGARINFQCHNEDVSE 309
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS 413
RR +GVV I+++DP +WP SKWR L+VRW++ + Q++VSPWEI+ + +S
Sbjct: 310 RR-SGVVVRISEIDPMKWPGSKWRSLLVRWEDGAECNGQDRVSPWEIEIAGGSVSVSHSL 368
Query: 414 SPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNH 473
S K RT L P + V A G D E+ + +VLQGQE + F + C
Sbjct: 369 SASSSK-RTKL-CPQGNLDVPAMWNGCTDSMETGKLPRVLQGQELMSFRTCHVPCAPQTA 426
Query: 474 PLGFEMRAPAHQSLA-LNGIRKDNINELVRALPTSYT----GFVESNRFPKVLQGQEI 526
+ A + L+ +G + + +T GF ES F +VLQGQEI
Sbjct: 427 EAAKLQSSDASRFLSNAHGCALGGPTSRLAVHSSGFTYQCVGFNESIGFSEVLQGQEI 484
>gi|379323192|gb|AFD01295.1| auxin response factor 2-3 [Brassica rapa subsp. pekinensis]
Length = 888
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/429 (46%), Positives = 287/429 (66%), Gaps = 14/429 (3%)
Query: 34 LNSSSSSSSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-AS 92
LN + S +SS +++Y ELWHACAGPL ++P++ + V YFPQGH+EQV AS
Sbjct: 63 LNVAVSGEGQKGHSSRVVDAEAALYRELWHACAGPLVTVPRQDDRVFYFPQGHIEQVEAS 122
Query: 93 SSAFPPIEVPNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLED 152
++ ++P +DL +I C+V++V L A ++DEVY Q+ LLP EA Q E+
Sbjct: 123 TNQAAEQQMPLYDLPSKILCRVINVDLKAEVDSDEVYAQITLLP---------EAIQDEN 173
Query: 153 LGVDEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQEL 212
+++E P + H FCKTLTASDTSTHGGFSV RR A++C PPLD +Q P+QEL
Sbjct: 174 -AIEKEAPPPPPPRFQVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQEL 232
Query: 213 VAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRR 272
VAKDLH EWRFRHI+RGQPRRHLL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR
Sbjct: 233 VAKDLHANEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRR 292
Query: 273 SVQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKII 332
+++ + + S++S + + VL+ +A+ST +MF V+Y PR + ++F++P+ +Y++ +
Sbjct: 293 AMRQQGNVSSSVISSHSMHLGVLATAWHAISTGTMFSVYYKPRTSPSEFIVPFDQYMESV 352
Query: 333 MNPICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQ 392
N IG RFKMRFE +++PE+R G + GI D DP RW SKWR L VRWDE
Sbjct: 353 KNNYSIGMRFKMRFEGEEAPEQRFTGTIVGIEDSDPTRWAKSKWRSLKVRWDETSSIPRP 412
Query: 393 EQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRS--- 449
++VSPW+++ +++ P LS PR K+ R+ + PD V R G + ++ + +
Sbjct: 413 DRVSPWKLEPALAPPALSPVPMPRPKRPRSNIAPSSPDSSVLIREGSAMGNKDPLPASGL 472
Query: 450 SKVLQGQEN 458
S+VLQGQE+
Sbjct: 473 SRVLQGQEH 481
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/93 (56%), Positives = 66/93 (70%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDV 738
RSCTKV KQG +GR++DL + Y +L++EL+ +F G L P K W I+YTD END+
Sbjct: 762 RSCTKVQKQGIALGRSVDLSKFQNYEELIAELDRMFEFNGELMAPKKDWLIVYTDDENDM 821
Query: 739 MVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGT 771
M+VGDDPW EFC V KI IYT+EEV KM GT
Sbjct: 822 MLVGDDPWQEFCGMVRKISIYTKEEVRKMNPGT 854
>gi|295844326|gb|ADG43160.1| auxin response factor 26 [Zea mays]
Length = 686
Score = 393 bits (1009), Expect = e-106, Method: Compositional matrix adjust.
Identities = 220/481 (45%), Positives = 296/481 (61%), Gaps = 31/481 (6%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
ELWHACAGP+ +LP++G++VVY PQGHL DL P + C+V DV+L
Sbjct: 24 ELWHACAGPVVALPRRGSLVVYLPQGHLAAAGGGDV-------AADLPPHVVCRVADVEL 76
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQ------LEDLGVDEEGGGRSPTKSTPHMFC 173
A+ DEV ++AL+ + E G NL +ED + + G HMFC
Sbjct: 77 CADAATDEVCARLALVAEGEAFGRNLGGGGVEGDDGMEDFDAERKSG-------MLHMFC 129
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
KTLTASDTSTHGGFSVPRRAAEDCFPPLDY Q RPSQELVAKDLHG +W+FRHIYRGQPR
Sbjct: 130 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRHIYRGQPR 189
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
RHLLTTGWS FV++K LVSGDAVLFLRG DGELRLG+RR++Q +N + ++ +
Sbjct: 190 RHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALFEDFNSDSTKRH 249
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
L+ VA+++ +S+FH+ Y+PRAT ++++IPY K++K + +P+CIG R + +D E
Sbjct: 250 SLTAVADSLKNRSVFHISYNPRATASEYIIPYAKFLKSLNHPVCIGARINFQCHNEDVSE 309
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS 413
RR +GVV I+++DP +WP SKWR L+VRW++ + Q++VSPWEI+ + +S
Sbjct: 310 RR-SGVVVRISEIDPMKWPGSKWRSLLVRWEDGAECNGQDRVSPWEIEIAGGSVSVSHSL 368
Query: 414 SPRMKKLRTGLQAPPPDYPVSA---RGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDT 470
S K RT L P + V A G G D E+ + +VLQGQE + F + C
Sbjct: 369 SASSSK-RTKL-CPQGNLDVPAMYVTGNGCTDSMETGKLPRVLQGQELMSFRTCHVPCAP 426
Query: 471 VNHPLGFEMRAPAHQSLA-LNGIRKDNINELVRALPTSYT----GFVESNRFPKVLQGQE 525
+ A + L+ +G + + +T GF ES F +VLQGQE
Sbjct: 427 QTAEAAKLQSSDASRFLSNAHGCALGGPTSRLAVHSSGFTYQCVGFNESIGFSEVLQGQE 486
Query: 526 I 526
I
Sbjct: 487 I 487
>gi|122207373|sp|Q2R3F5.2|ARFW_ORYSJ RecName: Full=Auxin response factor 23; AltName: Full=OsARF1
gi|108864435|gb|ABA93992.2| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
Group]
gi|222616062|gb|EEE52194.1| hypothetical protein OsJ_34072 [Oryza sativa Japonica Group]
Length = 853
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 255/652 (39%), Positives = 354/652 (54%), Gaps = 65/652 (9%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKVV 115
++ ELW ACAGPL ++P+ G V YFPQGH+EQV AS++ + ++L +I C+V+
Sbjct: 38 LFTELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLYNLPWKILCEVM 97
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPT----KSTPHM 171
+V+L A + DEVY Q+ LLP E+KQ ED G EE +P + H
Sbjct: 98 NVELKAEPDTDEVYAQLTLLP---------ESKQQEDNGSTEEEVPSAPAAGHVRPRVHS 148
Query: 172 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQ 231
FCKTLTASDTSTHGGFSV RR A++C PPLD +Q P+QELVAKDLHGVEWRFRHI+RGQ
Sbjct: 149 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQ 208
Query: 232 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSY 291
PRRHLL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++ + +P S++S + +
Sbjct: 209 PRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMH 268
Query: 292 PNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDS 351
VL+ +AV+T +MF V+Y PR + A+FV+PY +Y++ + IG RFKMRFE +++
Sbjct: 269 LGVLATAWHAVNTGTMFTVYYKPRTSPAEFVVPYDRYMESLKQNYSIGMRFKMRFEGEEA 328
Query: 352 PERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSI 411
PE+R G + G+ D DP WP SKWR L VRWDE E+VSPW+I+ +VS PP++
Sbjct: 329 PEQRFTGTIVGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEPAVSPPPVNP 388
Query: 412 QSSPRMKKLRTGLQAPPPDYPVSARGGG--VLDFEESVRSSKVLQGQENV------GFVS 463
PR K+LR A P D A+ V+ E + + Q QEN G S
Sbjct: 389 LPVPRTKRLRPNATALPADSSAIAKEAATKVVVESEPNGTQRTFQTQENATPKSGFGNSS 448
Query: 464 PLYGCD-TVNHPLGFEMR---APAHQSLALNGIRKDNINELVRALPTSYTGFVESNRFPK 519
L ++ P GF+ P L +G + + P SY+ + + PK
Sbjct: 449 ELESAQKSIMRPSGFDREKNNTPIQWKLGSDG-------RMQMSKPESYSEMLSGFQPPK 501
Query: 520 VLQ-GQEICPLRSLTGKVDLNLGTWGKPNF--GCNSMNMYQASKPNIYPPPSESLSNMFF 576
+Q Q C SL ++ T G NF N+ Q S N++P S +
Sbjct: 502 DVQIPQGFC---SLPEQI-----TAGHSNFWHTVNAQYQDQQSNHNMFP----SSWSFMP 549
Query: 577 PYGDMPKTVQHHTMPPYASNLQRE--NVKL-NSSSIQMPAIGAEIRKANLLNEHKPVENI 633
P + Q+++M A L + N K N +P G E P ++
Sbjct: 550 PNTRLGLNKQNYSMIQEAGVLSQRPGNTKFGNGVYAALPGRGTEQYSGGWFGHMMPNSHM 609
Query: 634 ---------PTPTFKANMRSHKDGSFNGTAAGCKLFGFSLTSETPTPSSQSP 676
P P A+ K A CKLFG L S + +SP
Sbjct: 610 DDTQPRLIKPKPLVVAHGDVQK-----AKGASCKLFGIHLDSPAKSEPLKSP 656
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 74/99 (74%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYT 732
SQ RSC KVHKQG +GR++DL + NGY +L++EL+ +F+ G L+ P K W ++YT
Sbjct: 719 SQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELIAELDDMFDFNGELKGPKKEWMVVYT 778
Query: 733 DSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGT 771
D+E D+M+VGDDPW EFC+ V KI IYT+EEV++M GT
Sbjct: 779 DNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRMNPGT 817
>gi|115485689|ref|NP_001067988.1| Os11g0523800 [Oryza sativa Japonica Group]
gi|108864434|gb|ABG22498.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
Group]
gi|108864436|gb|ABG22499.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
Group]
gi|113645210|dbj|BAF28351.1| Os11g0523800 [Oryza sativa Japonica Group]
Length = 852
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 255/652 (39%), Positives = 354/652 (54%), Gaps = 65/652 (9%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKVV 115
++ ELW ACAGPL ++P+ G V YFPQGH+EQV AS++ + ++L +I C+V+
Sbjct: 37 LFTELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLYNLPWKILCEVM 96
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPT----KSTPHM 171
+V+L A + DEVY Q+ LLP E+KQ ED G EE +P + H
Sbjct: 97 NVELKAEPDTDEVYAQLTLLP---------ESKQQEDNGSTEEEVPSAPAAGHVRPRVHS 147
Query: 172 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQ 231
FCKTLTASDTSTHGGFSV RR A++C PPLD +Q P+QELVAKDLHGVEWRFRHI+RGQ
Sbjct: 148 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQ 207
Query: 232 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSY 291
PRRHLL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++ + +P S++S + +
Sbjct: 208 PRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMH 267
Query: 292 PNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDS 351
VL+ +AV+T +MF V+Y PR + A+FV+PY +Y++ + IG RFKMRFE +++
Sbjct: 268 LGVLATAWHAVNTGTMFTVYYKPRTSPAEFVVPYDRYMESLKQNYSIGMRFKMRFEGEEA 327
Query: 352 PERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSI 411
PE+R G + G+ D DP WP SKWR L VRWDE E+VSPW+I+ +VS PP++
Sbjct: 328 PEQRFTGTIVGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEPAVSPPPVNP 387
Query: 412 QSSPRMKKLRTGLQAPPPDYPVSARGGG--VLDFEESVRSSKVLQGQENV------GFVS 463
PR K+LR A P D A+ V+ E + + Q QEN G S
Sbjct: 388 LPVPRTKRLRPNATALPADSSAIAKEAATKVVVESEPNGTQRTFQTQENATPKSGFGNSS 447
Query: 464 PLYGCD-TVNHPLGFEMR---APAHQSLALNGIRKDNINELVRALPTSYTGFVESNRFPK 519
L ++ P GF+ P L +G + + P SY+ + + PK
Sbjct: 448 ELESAQKSIMRPSGFDREKNNTPIQWKLGSDG-------RMQMSKPESYSEMLSGFQPPK 500
Query: 520 VLQ-GQEICPLRSLTGKVDLNLGTWGKPNF--GCNSMNMYQASKPNIYPPPSESLSNMFF 576
+Q Q C SL ++ T G NF N+ Q S N++P S +
Sbjct: 501 DVQIPQGFC---SLPEQI-----TAGHSNFWHTVNAQYQDQQSNHNMFP----SSWSFMP 548
Query: 577 PYGDMPKTVQHHTMPPYASNLQRE--NVKL-NSSSIQMPAIGAEIRKANLLNEHKPVENI 633
P + Q+++M A L + N K N +P G E P ++
Sbjct: 549 PNTRLGLNKQNYSMIQEAGVLSQRPGNTKFGNGVYAALPGRGTEQYSGGWFGHMMPNSHM 608
Query: 634 ---------PTPTFKANMRSHKDGSFNGTAAGCKLFGFSLTSETPTPSSQSP 676
P P A+ K A CKLFG L S + +SP
Sbjct: 609 DDTQPRLIKPKPLVVAHGDVQK-----AKGASCKLFGIHLDSPAKSEPLKSP 655
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 74/99 (74%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYT 732
SQ RSC KVHKQG +GR++DL + NGY +L++EL+ +F+ G L+ P K W ++YT
Sbjct: 718 SQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELIAELDDMFDFNGELKGPKKEWMVVYT 777
Query: 733 DSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGT 771
D+E D+M+VGDDPW EFC+ V KI IYT+EEV++M GT
Sbjct: 778 DNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRMNPGT 816
>gi|158513335|sp|A2ZET6.1|ARFW_ORYSI RecName: Full=Auxin response factor 23; AltName: Full=OsARF1
gi|125534572|gb|EAY81120.1| hypothetical protein OsI_36300 [Oryza sativa Indica Group]
Length = 853
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 255/652 (39%), Positives = 353/652 (54%), Gaps = 65/652 (9%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKVV 115
++ ELW ACAGPL ++P+ G V YFPQGH+EQV AS++ + ++L +I C+V+
Sbjct: 38 LFTELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLYNLPWKILCEVM 97
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPT----KSTPHM 171
+V+L A + DEVY Q+ LLP E KQ ED G EE +P + H
Sbjct: 98 NVELKAEPDTDEVYAQLTLLP---------ELKQQEDNGSTEEEVPSAPAAGHVRPRVHS 148
Query: 172 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQ 231
FCKTLTASDTSTHGGFSV RR A++C PPLD +Q P+QELVAKDLHGVEWRFRHI+RGQ
Sbjct: 149 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQ 208
Query: 232 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSY 291
PRRHLL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++ + +P S++S + +
Sbjct: 209 PRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMH 268
Query: 292 PNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDS 351
VL+ +AV+T +MF V+Y PR + A+FV+PY +Y++ + IG RFKMRFE +++
Sbjct: 269 LGVLATAWHAVNTGTMFTVYYKPRTSPAEFVVPYDRYMESLKRNYSIGMRFKMRFEGEEA 328
Query: 352 PERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSI 411
PE+R G + G+ D DP WP SKWR L VRWDE E+VSPW+I+ +VS PP++
Sbjct: 329 PEQRFTGTIVGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEPAVSPPPVNP 388
Query: 412 QSSPRMKKLRTGLQAPPPDYPVSARGGG--VLDFEESVRSSKVLQGQENV------GFVS 463
PR K+LR A P D A+ V+ E + + Q QEN G S
Sbjct: 389 LPVPRTKRLRPNATALPADSSAIAKEAATKVVVESEPNGTQRTFQTQENATPKSGFGNSS 448
Query: 464 PLYGCD-TVNHPLGFEMR---APAHQSLALNGIRKDNINELVRALPTSYTGFVESNRFPK 519
L ++ P GF+ P L +G + + P SY+ + + PK
Sbjct: 449 ELESAQKSIMRPSGFDREKNNTPIQWKLGSDGW-------MQMSKPESYSEMLSGFQPPK 501
Query: 520 VLQG-QEICPLRSLTGKVDLNLGTWGKPNF--GCNSMNMYQASKPNIYPPPSESLSNMFF 576
+Q Q C SL ++ T G NF N+ Q S N++P S +
Sbjct: 502 DVQTPQGFC---SLPEQI-----TAGHSNFWHTVNAQYQDQQSNHNMFP----SSWSFMP 549
Query: 577 PYGDMPKTVQHHTMPPYASNLQRE--NVKL-NSSSIQMPAIGAEIRKANLLNEHKPVENI 633
P + Q+++M A L + N K N +P G E P ++
Sbjct: 550 PNTRLGLNKQNYSMIQEAGVLSQRPGNTKFGNGVYAALPGRGTEQYSGGWFGHMMPNSHM 609
Query: 634 ---------PTPTFKANMRSHKDGSFNGTAAGCKLFGFSLTSETPTPSSQSP 676
P P A+ K A CKLFG L S + +SP
Sbjct: 610 DDTQPRLIKPKPLVVAHGDVQK-----AKGASCKLFGIHLDSPAKSEPLKSP 656
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 74/99 (74%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYT 732
SQ RSC KVHKQG +GR++DL + NGY +L++EL+ +F+ G L+ P K W ++YT
Sbjct: 719 SQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELIAELDDMFDFNGELKGPKKEWMVVYT 778
Query: 733 DSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGT 771
D+E D+M+VGDDPW EFC+ V KI IYT+EEV++M GT
Sbjct: 779 DNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRMNPGT 817
>gi|300373058|gb|ADG43145.1| auxin response factor 11 [Zea mays]
gi|414880472|tpg|DAA57603.1| TPA: hypothetical protein ZEAMMB73_690278 [Zea mays]
Length = 688
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 217/487 (44%), Positives = 295/487 (60%), Gaps = 33/487 (6%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVV 115
++ ELWHACAGP+ +LP++G++VVY PQGHL + DL P + C+V
Sbjct: 20 AVCRELWHACAGPVVALPRRGSLVVYLPQGHLAAAGGGNV-------AVDLPPHVACRVA 72
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKT 175
DV+L A+ DEVY ++AL+ + E G NL ++ E+ ++ HMFCKT
Sbjct: 73 DVELCADAATDEVYARLALVAEGEAFGRNLRGGGVDGDDDMEDFDVERKSRML-HMFCKT 131
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
LTASDTSTHGGFSVPRRAAEDCFPPLDY Q RPSQELVAKDLHG +W+FRHIYRGQPRRH
Sbjct: 132 LTASDTSTHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRHIYRGQPRRH 191
Query: 236 LLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVL 295
LLTTGWS FV++K LVSGDAVLFLRG DGELRLG+RR++Q +N S ++ + L
Sbjct: 192 LLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALFDDFSCDSTKRHTL 251
Query: 296 SVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERR 355
VA+++ KS+FH+ Y+PRAT ++++IP+ K++K + P CIG R ++ +D ERR
Sbjct: 252 LAVADSLKHKSVFHISYNPRATASEYIIPHHKFLKSLNLPFCIGARINLQCHNEDVSERR 311
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSP 415
+G+V ++++DP +WP SKWR L+VRW++ + + Q++VSPWEI+ + ++ S
Sbjct: 312 -SGMVVHVSEIDPMKWPGSKWRSLLVRWEDGVECNGQDRVSPWEIEIAGGSVSVAHSVSA 370
Query: 416 RMKKLRTGL----QAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTV 471
K RT L P V+ G G D E+ + +VLQGQ+ + F T
Sbjct: 371 SSSK-RTKLCPQGNLDVPTMYVTGNGNGCTDSVETGKFPRVLQGQDLMSF-------RTR 422
Query: 472 NHPLGFEMRAPAHQSLALNGIRKDNINELVRALPTSY------------TGFVESNRFPK 519
+ P + A + N PTS GF ES F +
Sbjct: 423 HVPSAPQTVEAAKLQSSGASRFLSNARGCALGGPTSRLAVHNSDFTYQSVGFNESIGFSE 482
Query: 520 VLQGQEI 526
VLQGQEI
Sbjct: 483 VLQGQEI 489
>gi|23893346|emb|CAC83756.1| auxin response factor 1 [Oryza sativa Japonica Group]
Length = 836
Score = 390 bits (1003), Expect = e-105, Method: Compositional matrix adjust.
Identities = 253/652 (38%), Positives = 354/652 (54%), Gaps = 63/652 (9%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKV 114
+++ ELW ACAGPL ++P+ G V YFPQGH+EQV AS++ + ++L +I C+V
Sbjct: 20 ALFTELWSACAGPLVTVPRVGEKVFYFPQGHIEQVEASTNQVGEQRMQLYNLPWKILCEV 79
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPT----KSTPH 170
++V+L A + DEVY Q+ LLP E+KQ ED G EE +P + H
Sbjct: 80 MNVELKAEPDTDEVYAQLTLLP---------ESKQQEDNGSTEEEVPSAPAAGHVRPRVH 130
Query: 171 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRG 230
FCKTLTASDTSTHGGFSV RR A++C PPLD +Q P+QELVAKDLHGVEWRFRHI+RG
Sbjct: 131 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRG 190
Query: 231 QPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNS 290
QPRRHLL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++ + +P S++S +
Sbjct: 191 QPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSM 250
Query: 291 YPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDD 350
+ VL+ +AV+T +MF V+Y PR + A+FV+PY +Y++ + IG RFKMRFE ++
Sbjct: 251 HLGVLATAWHAVNTGTMFTVYYKPRTSPAEFVVPYDRYMESLKQNYSIGMRFKMRFEGEE 310
Query: 351 SPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLS 410
+PE+R G + G+ D DP WP SKWR L VRWDE E+VSPW+I+ +VS PP++
Sbjct: 311 APEQRFTGTIVGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEPAVSPPPVN 370
Query: 411 IQSSPRMKKLRTGLQAPPPDYPVSARGGG--VLDFEESVRSSKVLQGQENV------GFV 462
PR K+LR A P D A+ V+ E + + Q QEN G
Sbjct: 371 PLPVPRTKRLRPNATALPADSSAIAKEAATKVVVESEPNGTQRTFQTQENATPKSGFGNS 430
Query: 463 SPLYGCD-TVNHPLGFEMR---APAHQSLALNGIRKDNINELVRALPTSYTGFVESNRFP 518
S L ++ P GF+ P L +G + + P SY+ + + P
Sbjct: 431 SELESAQKSIMRPSGFDREKNNTPIQWKLGSDG-------RMQMSKPESYSEMLSGFQPP 483
Query: 519 KVLQGQEICPLRSLTGKVDLNLGTWGKPNF--GCNSMNMYQASKPNIYPPPSESLSNMFF 576
K +Q + SL ++ T G NF N+ Q S N++P S +
Sbjct: 484 KDVQIPQ--GFWSLPEQI-----TAGHSNFWHTVNAQYQDQQSNHNMFP----SSWSFMP 532
Query: 577 PYGDMPKTVQHHTMPPYASNLQRE--NVKL-NSSSIQMPAIGAEIRKANLLNEHKPVENI 633
P + Q+++M A L + N K N +P G E P ++
Sbjct: 533 PNTRLGLNKQNYSMIQEAGVLSQRPGNTKFGNGVYAALPGRGTEQYSGGWFGHMMPNSHM 592
Query: 634 ---------PTPTFKANMRSHKDGSFNGTAAGCKLFGFSLTSETPTPSSQSP 676
P P A+ K A CKLFG L S + +SP
Sbjct: 593 DDTQPRLIKPKPLVVAHGDVQK-----AKGASCKLFGIHLDSPAKSEPLKSP 639
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 74/99 (74%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYT 732
SQ RSC KVHKQG +GR++DL + NGY +L++EL+ +F+ G L+ P K W ++YT
Sbjct: 702 SQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELIAELDDMFDFNGELKGPKKEWMVVYT 761
Query: 733 DSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGT 771
D+E D+M+VGDDPW EFC+ V KI IYT+EEV++M GT
Sbjct: 762 DNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRMNPGT 800
>gi|158564103|sp|Q0DGS1.2|ARFN_ORYSJ RecName: Full=Auxin response factor 14
Length = 687
Score = 390 bits (1001), Expect = e-105, Method: Compositional matrix adjust.
Identities = 218/471 (46%), Positives = 288/471 (61%), Gaps = 10/471 (2%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
ELWHACAGP +LP++G+ +VY PQ HL A + P + C+VV V+L
Sbjct: 23 ELWHACAGPGVALPRRGSALVYLPQAHL--AADGGGGEVPPAGAAAVPPHVACRVVGVEL 80
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
A+ DEVY ++AL+ + E+ N ED + EG PHMFCKTLTAS
Sbjct: 81 RADAATDEVYARLALVAEGEMLQRNFREGGGEDGAGEMEGCDAEKKPRMPHMFCKTLTAS 140
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
DTSTHGGFSVPRRAAEDCFPPLDYK RPSQEL+A DLHG +W+FRHIYRGQPRRHLLT
Sbjct: 141 DTSTHGGFSVPRRAAEDCFPPLDYKTVRPSQELIAVDLHGTQWKFRHIYRGQPRRHLLTI 200
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVA 299
GWS FV++K LVSGDAVLFLRG DG+LRLG+RR+VQ RN ++ +S +LS VA
Sbjct: 201 GWSSFVNRKKLVSGDAVLFLRGDDGQLRLGVRRAVQLRNEALFEPVNSSDSKLRILSSVA 260
Query: 300 NAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCNGV 359
+++ KS+FH+ ++PR+ ++F++PY + +K + +P IG RF++ +E +D+ ER G+
Sbjct: 261 SSLENKSVFHICFNPRSGASEFIVPYWRLLKSLNHPFSIGMRFRVCYESEDANERSA-GL 319
Query: 360 VTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKK 419
++GI+++DP RWP S+W+CL+VRWD+ S HQ +VSPWEI+R +S+ S
Sbjct: 320 ISGISEVDPIRWPGSRWKCLLVRWDDSTDSSHQNRVSPWEIERVGG--SVSVTHSLSSGS 377
Query: 420 LRTGLQAPPP--DYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHPLGF 477
RT L P D P G G D + +VLQGQE G S C F
Sbjct: 378 KRTKLHFPQGSLDTPF-LNGNGHPDSMGTENFHRVLQGQEFRGSRSHGVVCSESPGVPNF 436
Query: 478 EMRAPAHQSLALNGIRKDNINELVRALPTSY--TGFVESNRFPKVLQGQEI 526
+ S + G R +Y GF ES FP+VLQGQE+
Sbjct: 437 QSPDNRRFSADMRGYMMPASGPPQRNTEFTYQPIGFSESLGFPEVLQGQEM 487
>gi|255543190|ref|XP_002512658.1| transcription factor, putative [Ricinus communis]
gi|223548619|gb|EEF50110.1| transcription factor, putative [Ricinus communis]
Length = 787
Score = 388 bits (997), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/376 (50%), Positives = 259/376 (68%), Gaps = 14/376 (3%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKV 114
++Y ELWHACAGPL ++P++G +V YFPQGH+EQV AS++ ++P +DL +I C+V
Sbjct: 18 ALYKELWHACAGPLVTVPRQGELVFYFPQGHIEQVEASTNQAADEQMPAYDLPGKILCRV 77
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
V+VQL A + DEV+ Q+ LLPQ E + +E K L +PT+ H FCK
Sbjct: 78 VNVQLKAEPDTDEVFAQITLLPQSEQDENLVEKKALP-----------APTRPRVHSFCK 126
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLTASDTSTHGGFSV RR A++C PPLD Q P+QELVAKDL G EWRFRHI+RGQPRR
Sbjct: 127 TLTASDTSTHGGFSVLRRHADECLPPLDMSLQPPAQELVAKDLLGNEWRFRHIFRGQPRR 186
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLL +GWS+FVS K LV+GDA +FLRG+ GELR+G+RR+++ +P S +S + + +
Sbjct: 187 HLLQSGWSLFVSAKKLVAGDAFIFLRGETGELRVGVRRAMRQSCNVPSSFMSSHSMHIGI 246
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
L+ +AVST +MF V+Y PR + A+F+IP KY++ + N IG RFKMRFE +++PE+
Sbjct: 247 LATAWHAVSTGTMFTVYYKPRTSPAEFIIPMDKYMESVKNNFTIGMRFKMRFEAEEAPEQ 306
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSS 414
R G V G+ DP RWP S+WRCL VRWDE ++VSPWE++ +L PL +
Sbjct: 307 RFLGTVIGVEHADPKRWPTSRWRCLKVRWDETSSLHRPDRVSPWEVE--PALAPLDPLPT 364
Query: 415 PRMKKLRTGLQAPPPD 430
R+K+ R+ + P D
Sbjct: 365 CRLKRSRSNMPMPSAD 380
Score = 111 bits (278), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 63/91 (69%)
Query: 677 GKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSEN 736
G C KVHKQG VGR +DL + NGYN+L++EL+ +F G L K W I +TD E
Sbjct: 672 GSTRCVKVHKQGIAVGRYVDLTKFNGYNELIAELDRIFEFSGELITSNKNWLIAFTDDEG 731
Query: 737 DVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
D+M+VGDDPW EFC+ V +I +YT+EE+ +M
Sbjct: 732 DMMLVGDDPWEEFCSMVRRIFVYTREEINRM 762
>gi|326520141|dbj|BAK03995.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 826
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 204/468 (43%), Positives = 286/468 (61%), Gaps = 29/468 (6%)
Query: 51 SSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQ 109
+S +Y ELWHACAGPL ++P+ G++V YFPQGH+EQV AS + ++ +DL +
Sbjct: 16 TSTGDPLYDELWHACAGPLVTVPRVGDMVYYFPQGHIEQVEASMNQVAANQMRLYDLPSK 75
Query: 110 IFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTP 169
+ C+V++V+L A + DEVY QV L+P+PE EA GG P +
Sbjct: 76 LLCRVLNVELKAEADTDEVYAQVMLMPEPE----QSEAAATTTEKSSSATGGTMPARPAV 131
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
FCKTLTASDTSTHGGFSV RR A++C PPLD Q P+QELVAKDLHG+EWRFRHI+R
Sbjct: 132 RSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFR 191
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQN 289
GQPRRHLL +GWS+FVS K LV+GDA +FLRG+ GELR+G+RR+++ + + S++S +
Sbjct: 192 GQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRAMRQLSNIASSVISSHS 251
Query: 290 SYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMD 349
+ VL+ +A++TK+MF V+Y PR + ++F+IPY KY + + N IGTRFKMRFE +
Sbjct: 252 MHLGVLATAWHAINTKTMFTVYYKPRTSRSEFIIPYDKYTESVKNIYSIGTRFKMRFEGE 311
Query: 350 DSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPL 409
++PE+R G + G +LD WP S WR L VRWDE ++VSPWEI+ + S PP+
Sbjct: 312 EAPEQRFTGTIVGSDNLDQL-WPESSWRSLKVRWDESSTIPRPDRVSPWEIEPASS-PPV 369
Query: 410 SIQSSPRMKKLRTGLQAPPPDYPVSARGGGV---LDFEESVRS--SKVLQGQEN-VGFVS 463
+ R K+ R + P+ V + G +D ++ R+ + VL G E ++
Sbjct: 370 NPLPLSRAKRSRPNVPPASPESSVRTKEGATKADMDCAQAQRNQNNTVLPGHEQRSNKLT 429
Query: 464 PLYGCDTV----------------NHPLGFEMRAPAHQSLALNGIRKD 495
+ D N+PL F+ R H S+ L D
Sbjct: 430 DINDFDATVQKPMVWSTPPPNIGKNNPLTFQQRPSVHNSIQLRRREAD 477
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 72/101 (71%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYT 732
S RSCTKVHKQG +GR++DL + Y++L +EL+ +F+ +G L K W+I+YT
Sbjct: 690 SHGASTRSCTKVHKQGVALGRSVDLSKFVDYDELTAELDKMFDFDGELMSSNKNWQIVYT 749
Query: 733 DSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGTTD 773
D+E D+M+VGDDPW EFC+ V KI IYT+EEV+KM +D
Sbjct: 750 DNEGDMMLVGDDPWEEFCSMVRKICIYTKEEVQKMNSKPSD 790
>gi|301793211|emb|CBA11996.1| putative auxin response factor 2 [Cabomba aquatica]
Length = 782
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/431 (44%), Positives = 279/431 (64%), Gaps = 25/431 (5%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKVV 115
+Y ELWHACAGPL ++P++G V YFPQGH+EQV AS++ ++P + L +I C V+
Sbjct: 55 LYNELWHACAGPLVTVPRRGEKVFYFPQGHIEQVEASTNQVSDQQMPIYKLPSKILCTVI 114
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHM--FC 173
++ L A + DEV+ Q+ L+P+ + +D+ ++ P +S PH+ FC
Sbjct: 115 NIDLKAEPDTDEVFAQMTLVPE--------STQDEKDIIIETP----PPLQSRPHVHSFC 162
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
KTLTASDTSTHGGFSV RR A++C PPLD +Q PSQELVAKDLHG EW FRHI+RGQPR
Sbjct: 163 KTLTASDTSTHGGFSVLRRHADECLPPLDMCRQPPSQELVAKDLHGKEWSFRHIFRGQPR 222
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
RHLL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++ ++ +P S++S + +
Sbjct: 223 RHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQSNVPSSVISSHSMHLG 282
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
VL+ ++A+ T +MF V+Y PR + ++F++P+ +YV+ I IG RFKMRFE +++PE
Sbjct: 283 VLATASHAIQTGTMFTVYYKPRTSPSEFIVPFAQYVESIKKNYSIGMRFKMRFEGEEAPE 342
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS 413
+R G + GI D+D RWP SKWRCL VRWDE +++SPW+I+ +L P+++
Sbjct: 343 QRFTGTIIGIGDVDSTRWPESKWRCLKVRWDEQTSVPRPDKISPWQIE--PALAPIALNP 400
Query: 414 SP--RMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRS---SKVLQGQENVGFVSPLYGC 468
P R K+ R + PD R + + + + S+VLQGQE C
Sbjct: 401 LPVSRTKRPRPNILPTSPDVSALTRVPPKVAVDAAAQDHGFSRVLQGQEITTLRGAFAEC 460
Query: 469 ---DTVNHPLG 476
+ P+G
Sbjct: 461 SESENAQKPVG 471
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/68 (52%), Positives = 52/68 (76%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDV 738
RSCTKV KQGS +GR++DL + Y +L++EL+H+F +G L + K W ++YTD+E D+
Sbjct: 714 RSCTKVQKQGSALGRSVDLAKFTSYEELITELDHMFEFQGELMNSNKNWLVVYTDNEGDM 773
Query: 739 MVVGDDPW 746
M+VGDDPW
Sbjct: 774 MLVGDDPW 781
>gi|224030853|gb|ACN34502.1| unknown [Zea mays]
gi|413951417|gb|AFW84066.1| hypothetical protein ZEAMMB73_313624 [Zea mays]
Length = 806
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 275/421 (65%), Gaps = 19/421 (4%)
Query: 47 SSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSS---AFPPIEVPN 103
S + S+ +Y ELW ACAGPL ++P+ G++V YFPQGH+EQV +S A P+ +
Sbjct: 10 SQAPSNSGDPLYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNPMRL-- 67
Query: 104 FDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRS 163
+DL ++ C+V++V+L A + DEVY Q+ L+P+PE + E G +
Sbjct: 68 YDLPSKLLCRVLNVELKAETDTDEVYAQIMLMPEPEQNDVAAEKT---------SSGSAA 118
Query: 164 PTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWR 223
P + FCKTLTASDTSTHGGFSV RR A++C P LD Q P+QELVAKDLHG+EWR
Sbjct: 119 PPRPAVRSFCKTLTASDTSTHGGFSVLRRHADECLPALDMSQSPPTQELVAKDLHGMEWR 178
Query: 224 FRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDS 283
FRHI+RGQPRRHLL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++ + +P S
Sbjct: 179 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSS 238
Query: 284 ILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFK 343
++S Q+ + VL+ +A++TKSMF V+Y PR + ++F+IPY +Y++ + N IG RF+
Sbjct: 239 VISSQSMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFR 298
Query: 344 MRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRS 403
MRFE +++PE+R G + G +LDP WP+S WR L VRWDE ++VSPW+I+
Sbjct: 299 MRFEGEEAPEQRFTGTIVGCENLDPL-WPDSSWRYLKVRWDEPSTIPRPDKVSPWKIE-P 356
Query: 404 VSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGGV---LDFEESVRSSKVLQGQENVG 460
S PP++ R K+ R P P+ V + G D ++ + VLQ QE +
Sbjct: 357 ASSPPVNPLPLSRGKRPRQNAPPPSPESSVLTKEGATKIDTDSAQTPHQNSVLQSQEQMS 416
Query: 461 F 461
F
Sbjct: 417 F 417
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 70/95 (73%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYT 732
SQ RSCTKVHKQG +GR++DL + Y +L +EL+ +F EG L + W+I+YT
Sbjct: 686 SQGASTRSCTKVHKQGVALGRSVDLSKFTDYGELKAELDKMFEFEGELVSANRNWQIVYT 745
Query: 733 DSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
D+E D+M+VGDDPW EFCN V KI+IYT+EEV+KM
Sbjct: 746 DNEGDMMLVGDDPWEEFCNIVRKIYIYTKEEVQKM 780
>gi|326512148|dbj|BAJ96055.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326517244|dbj|BAJ99988.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 801
Score = 386 bits (992), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/412 (46%), Positives = 278/412 (67%), Gaps = 21/412 (5%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKVV 115
+Y ELWHACAGPL ++P+ G++V YFPQGH+EQV AS + ++ +DL P++ C+V+
Sbjct: 18 LYDELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNQMRLYDLPPKLLCRVI 77
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGG--GRSPTKSTPHMFC 173
+V+L A + DEVY QV L+P+PE ++ VD+ G +P + FC
Sbjct: 78 NVELKAEADTDEVYAQVMLMPEPEQN----------EMAVDKSTSTTGATPPRPAVRSFC 127
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
KTLTASDTSTHGGFSV RR A++C PPLD Q P+QELVAKDLHG++WRFRHI+RGQPR
Sbjct: 128 KTLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMDWRFRHIFRGQPR 187
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
RHLL +GWS+FVS K LV+GDA +FLRG+ GELR+G+RR+++ + +P S++S + +
Sbjct: 188 RHLLQSGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRAMRQLSNVPSSVISSHSMHLG 247
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
VL+ +A++TKSMF V+Y PR + ++F+IPY +Y++ + N IG RF+MRFE +++PE
Sbjct: 248 VLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPE 307
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS 413
+R G + G +LD WP S WR L VRWDE ++VSPW+I+ + S PP++
Sbjct: 308 QRFTGTIVGSENLDQL-WPESNWRSLKVRWDEPSTIPRPDRVSPWKIEPASS-PPVNPLP 365
Query: 414 SPRMKKLRTGLQAPPPDYPVSARGGGV-LDFEESV-----RSSKVLQGQENV 459
R+K+ R + P+ V + G +D + + ++S VLQGQE++
Sbjct: 366 LSRVKRPRPNVPPVSPESSVLTKEGATKIDMDSAQAQQRNQNSMVLQGQEHM 417
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 68/95 (71%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYT 732
S RSCTKVHKQG +GR++DL + Y++L +EL+ +F +G L + W+I+YT
Sbjct: 674 SHGASTRSCTKVHKQGVALGRSVDLSKFGDYDELTAELDRMFEFDGELMSSNRDWQIVYT 733
Query: 733 DSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
D E D+M+VGDDPW EFC+ V KI IYT+EEV+KM
Sbjct: 734 DPEGDMMLVGDDPWEEFCSIVRKIFIYTKEEVQKM 768
>gi|295844324|gb|ADG43159.1| auxin response factor 25 [Zea mays]
Length = 801
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 275/421 (65%), Gaps = 19/421 (4%)
Query: 47 SSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSS---AFPPIEVPN 103
S + S+ +Y ELW ACAGPL ++P+ G++V YFPQGH+EQV +S A P+ +
Sbjct: 5 SQAPSNSGDPLYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNPMRL-- 62
Query: 104 FDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRS 163
+DL ++ C+V++V+L A + DEVY Q+ L+P+PE + E G +
Sbjct: 63 YDLPSKLLCRVLNVELKAETDTDEVYAQIMLMPEPEQNDVAAEKT---------SSGSAA 113
Query: 164 PTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWR 223
P + FCKTLTASDTSTHGGFSV RR A++C P LD Q P+QELVAKDLHG+EWR
Sbjct: 114 PPRPAVRSFCKTLTASDTSTHGGFSVLRRHADECLPALDMSQSPPTQELVAKDLHGMEWR 173
Query: 224 FRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDS 283
FRHI+RGQPRRHLL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++ + +P S
Sbjct: 174 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSS 233
Query: 284 ILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFK 343
++S Q+ + VL+ +A++TKSMF V+Y PR + ++F+IPY +Y++ + N IG RF+
Sbjct: 234 VISSQSMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFR 293
Query: 344 MRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRS 403
MRFE +++PE+R G + G +LDP WP+S WR L VRWDE ++VSPW+I+
Sbjct: 294 MRFEGEEAPEQRFTGTIVGCENLDPL-WPDSSWRYLKVRWDEPSTIPRPDKVSPWKIE-P 351
Query: 404 VSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGGV---LDFEESVRSSKVLQGQENVG 460
S PP++ R K+ R P P+ V + G D ++ + VLQ QE +
Sbjct: 352 ASSPPVNPLPLSRGKRPRQNAPPPSPESSVLTKEGATKIDTDSAQTPHQNSVLQSQEQMS 411
Query: 461 F 461
F
Sbjct: 412 F 412
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 70/95 (73%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYT 732
SQ RSCTKVHKQG +GR++DL + Y +L +EL+ +F EG L + W+I+YT
Sbjct: 681 SQGASTRSCTKVHKQGVALGRSVDLSKFTDYGELKAELDKMFEFEGELVSANRNWQIVYT 740
Query: 733 DSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
D+E D+M+VGDDPW EFCN V KI+IYT+EEV+KM
Sbjct: 741 DNEGDMMLVGDDPWEEFCNIVRKIYIYTKEEVQKM 775
>gi|413951418|gb|AFW84067.1| hypothetical protein ZEAMMB73_313624 [Zea mays]
gi|413951419|gb|AFW84068.1| hypothetical protein ZEAMMB73_313624 [Zea mays]
Length = 812
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 276/421 (65%), Gaps = 19/421 (4%)
Query: 47 SSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSS---AFPPIEVPN 103
S + S+ +Y ELW ACAGPL ++P+ G++V YFPQGH+EQV +S A P+ +
Sbjct: 10 SQAPSNSGDPLYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNPMRL-- 67
Query: 104 FDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRS 163
+DL ++ C+V++V+L A + DEVY Q+ L+P+PE + E G +
Sbjct: 68 YDLPSKLLCRVLNVELKAETDTDEVYAQIMLMPEPEQNDVAAEKT---------SSGSAA 118
Query: 164 PTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWR 223
P + FCKTLTASDTSTHGGFSV RR A++C P LD Q P+QELVAKDLHG+EWR
Sbjct: 119 PPRPAVRSFCKTLTASDTSTHGGFSVLRRHADECLPALDMSQSPPTQELVAKDLHGMEWR 178
Query: 224 FRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDS 283
FRHI+RGQPRRHLL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++ + +P S
Sbjct: 179 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSS 238
Query: 284 ILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFK 343
++S Q+ + VL+ +A++TKSMF V+Y PR + ++F+IPY +Y++ + N IG RF+
Sbjct: 239 VISSQSMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFR 298
Query: 344 MRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRS 403
MRFE +++PE+R G + G +LDP WP+S WR L VRWDE ++VSPW+I+ +
Sbjct: 299 MRFEGEEAPEQRFTGTIVGCENLDPL-WPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEPA 357
Query: 404 VSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGGV---LDFEESVRSSKVLQGQENVG 460
S PP++ R K+ R P P+ V + G D ++ + VLQ QE +
Sbjct: 358 SS-PPVNPLPLSRGKRPRQNAPPPSPESSVLTKEGATKIDTDSAQTPHQNSVLQSQEQMS 416
Query: 461 F 461
F
Sbjct: 417 F 417
Score = 116 bits (290), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 70/101 (69%), Gaps = 6/101 (5%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYT 732
SQ RSCTKVHKQG +GR++DL + Y +L +EL+ +F EG L + W+I+YT
Sbjct: 686 SQGASTRSCTKVHKQGVALGRSVDLSKFTDYGELKAELDKMFEFEGELVSANRNWQIVYT 745
Query: 733 DSENDVMVVGDDPW------HEFCNEVSKIHIYTQEEVEKM 767
D+E D+M+VGDDPW EFCN V KI+IYT+EEV+KM
Sbjct: 746 DNEGDMMLVGDDPWDPLLTSREFCNIVRKIYIYTKEEVQKM 786
>gi|413951416|gb|AFW84065.1| hypothetical protein ZEAMMB73_313624 [Zea mays]
Length = 728
Score = 386 bits (991), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/421 (45%), Positives = 276/421 (65%), Gaps = 19/421 (4%)
Query: 47 SSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSS---AFPPIEVPN 103
S + S+ +Y ELW ACAGPL ++P+ G++V YFPQGH+EQV +S A P+ +
Sbjct: 10 SQAPSNSGDPLYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNPMRL-- 67
Query: 104 FDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRS 163
+DL ++ C+V++V+L A + DEVY Q+ L+P+PE + E G +
Sbjct: 68 YDLPSKLLCRVLNVELKAETDTDEVYAQIMLMPEPEQNDVAAEKT---------SSGSAA 118
Query: 164 PTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWR 223
P + FCKTLTASDTSTHGGFSV RR A++C P LD Q P+QELVAKDLHG+EWR
Sbjct: 119 PPRPAVRSFCKTLTASDTSTHGGFSVLRRHADECLPALDMSQSPPTQELVAKDLHGMEWR 178
Query: 224 FRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDS 283
FRHI+RGQPRRHLL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++ + +P S
Sbjct: 179 FRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSS 238
Query: 284 ILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFK 343
++S Q+ + VL+ +A++TKSMF V+Y PR + ++F+IPY +Y++ + N IG RF+
Sbjct: 239 VISSQSMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFR 298
Query: 344 MRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRS 403
MRFE +++PE+R G + G +LDP WP+S WR L VRWDE ++VSPW+I+ +
Sbjct: 299 MRFEGEEAPEQRFTGTIVGCENLDPL-WPDSSWRYLKVRWDEPSTIPRPDKVSPWKIEPA 357
Query: 404 VSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGGV---LDFEESVRSSKVLQGQENVG 460
S PP++ R K+ R P P+ V + G D ++ + VLQ QE +
Sbjct: 358 SS-PPVNPLPLSRGKRPRQNAPPPSPESSVLTKEGATKIDTDSAQTPHQNSVLQSQEQMS 416
Query: 461 F 461
F
Sbjct: 417 F 417
>gi|26251300|gb|AAG43286.2|AF140228_1 putative auxin response factor 1 [Oryza sativa Indica Group]
Length = 857
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 251/642 (39%), Positives = 352/642 (54%), Gaps = 65/642 (10%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKVV 115
++ ELW ACAGPL ++P+ G YFPQGH+EQV AS++ + ++L +I C+V+
Sbjct: 37 LFTELWSACAGPLVTVPRVGEKEFYFPQGHIEQVEASTNQVGEQRMQLYNLPWKILCEVM 96
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPT----KSTPHM 171
+V+L A + DEVY Q+ LLP E K+ ED G EE +P + H
Sbjct: 97 NVELKAEPDTDEVYAQLTLLP---------ELKRQEDNGSTEEEVPSAPAAGHVRPRVHS 147
Query: 172 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQ 231
FCKTLTASDTSTHGGFSV RR A++C PPLD +Q P+QELVAKDLHGVEWRFRHI+RGQ
Sbjct: 148 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGVEWRFRHIFRGQ 207
Query: 232 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSY 291
PRRHLL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++ + +P S++S + +
Sbjct: 208 PRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMH 267
Query: 292 PNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDS 351
VL+ +AV+T +MF V+Y PR + A+FV+PY +Y++ + IG RFKMRFE +++
Sbjct: 268 LGVLATAWHAVNTGTMFTVYYKPRTSPAEFVVPYDRYMESLKRNYSIGMRFKMRFESEEA 327
Query: 352 PERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSI 411
PE+R G + G+ D DP WP SKWR L VRWDE E+VSPW+I+ +VS PP++
Sbjct: 328 PEQRFTGTIVGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQIEPAVSPPPVNP 387
Query: 412 QSSPRMKKLRTGLQAPPPDYPVSARGGG--VLDFEESVRSSKVLQGQENV------GFVS 463
PR K+LR A P D A+ V+ E + + Q QEN G S
Sbjct: 388 LPVPRTKRLRPNATALPADSSAIAKEAATKVVVESEPNGTQRTFQTQENATPKSGFGNSS 447
Query: 464 PLYGCD-TVNHPLGFEMR---APAHQSLALNGIRKDNINELVRALPTSYTGFVESNRFPK 519
L ++ P GF+ P L +G + + P SY+ + + PK
Sbjct: 448 ELESAQKSIMRPSGFDREKNNTPIQWKLGSDG-------RMQMSKPESYSEMLSGFQPPK 500
Query: 520 VLQG-QEICPLRSLTGKVDLNLGTWGKPNF--GCNSMNMYQASKPNIYPPPSESLSNMFF 576
+Q Q C SL ++ T G NF N+ Q S N++P S +
Sbjct: 501 DVQTPQGFC---SLPEQI-----TAGHSNFWHTVNAQYQDQQSNHNMFP----SSWSFMP 548
Query: 577 PYGDMPKTVQHHTMPPYASNLQRE--NVKL-NSSSIQMPAIGAE---------IRKANLL 624
P + Q+++M A L + N K N +P G E + + +
Sbjct: 549 PNTRLGLNKQNYSMIQEAGVLSQRPGNTKFGNGVYAALPGRGTEQYSGGWFGLMMPNSHM 608
Query: 625 NEHKPVENIPTPTFKANMRSHKDGSFNGTAAGCKLFGFSLTS 666
++ +P P P A+ K A CKLFG L S
Sbjct: 609 DDTQPRLIKPKPLVVAHGDVQK-----AKGASCKLFGIHLDS 645
Score = 125 bits (314), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 74/99 (74%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYT 732
SQ RSC KVHKQG +GR++DL + NGY +L++EL+ +F+ G L+ P K W ++YT
Sbjct: 723 SQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELIAELDDMFDFNGELKGPKKEWMVVYT 782
Query: 733 DSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGT 771
D+E D+M+VGDDPW EFC+ V KI IYT+EEV++M GT
Sbjct: 783 DNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRMNPGT 821
>gi|357472329|ref|XP_003606449.1| Auxin response factor [Medicago truncatula]
gi|355507504|gb|AES88646.1| Auxin response factor [Medicago truncatula]
Length = 361
Score = 385 bits (990), Expect = e-104, Method: Compositional matrix adjust.
Identities = 215/379 (56%), Positives = 253/379 (66%), Gaps = 33/379 (8%)
Query: 439 GVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHPLGFEMRAPAH-QSLALNGIRKD-N 496
G++ FEESVRS KVLQGQEN GF+S YGCD V + GFE+ +H Q+LA GI K
Sbjct: 7 GMMGFEESVRSPKVLQGQENTGFMSLYYGCDKVTNQPGFELSTSSHHQNLASTGIGKVVT 66
Query: 497 INELVRALPTSYTGFVESNRFPKVLQGQEICPLRSLTGKVDLNLGTWGKPNFGCNSMNMY 556
+EL+ P SY GF+ESN FP+VLQGQEIC L+SL+GKVD N+G WG
Sbjct: 67 SSELMSVHPFSYAGFMESNNFPRVLQGQEICKLKSLSGKVDFNIGAWG------------ 114
Query: 557 QASKPNIYPPPSESLSNMFFPYGDMPKTVQHHTMPPYASNLQRENVKLNSSSIQMPAIGA 616
+KP S + FPYGD+ K+ Q ++ +NV N+ SI I
Sbjct: 115 --TKP--------SFQSACFPYGDIDKSNQASMFSSKHTSFMSDNVPFNTPSIVAGDIRK 164
Query: 617 EIRKA--NLL-NEHKPVENIPTPT--FKANMRSHKDGSFNGTAAGCKLFGFSLTSETPTP 671
E+ ++ NLL NEHK +N+ N + D + G A CKLFGF L+ E +
Sbjct: 165 EVGRSGSNLLPNEHKLQDNVSASASLVDTNRNAPNDNNVKGKANSCKLFGFPLSGEPSSQ 224
Query: 672 SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILY 731
+ Q+ KRSCTKVHKQGSLVGRAIDL RL+GYNDLLSELE LF MEGLLRD KGWRILY
Sbjct: 225 NLQNTAKRSCTKVHKQGSLVGRAIDLSRLSGYNDLLSELEKLFGMEGLLRDSDKGWRILY 284
Query: 732 TDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIG--TTDDTQSCLDQAPVIMEVS 789
TDSEND+MVVGDDPWHEFC+ VSKIHIYT+EEVEKMT G T DDT SCLDQAPVI+E
Sbjct: 285 TDSENDIMVVGDDPWHEFCDVVSKIHIYTKEEVEKMTFGMMTNDDTHSCLDQAPVIIE-- 342
Query: 790 VSKSSSVSQPDSSPTVVRV 808
SKSSSV QPD SPTVVRV
Sbjct: 343 PSKSSSVGQPDYSPTVVRV 361
>gi|357445193|ref|XP_003592874.1| Auxin response factor [Medicago truncatula]
gi|355481922|gb|AES63125.1| Auxin response factor [Medicago truncatula]
Length = 671
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 187/384 (48%), Positives = 261/384 (67%), Gaps = 12/384 (3%)
Query: 39 SSSSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFP 97
+S+ SA +S + S + ++Y ELWHACAGPL +LP++G V YFPQGH+EQ+ AS +
Sbjct: 2 ASNHMSAVTSRAGSTNDALYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMNQGL 61
Query: 98 PIEVPNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDE 157
++P+F+L +I CKVV++ L A E DEVY Q+ LLP+ + + L +
Sbjct: 62 EQQMPSFNLPSKILCKVVNIHLRAEPETDEVYAQITLLPETDQSEVTSPDDPLPE----- 116
Query: 158 EGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDL 217
P + T H FCKTLTASDTSTHGGFSV RR A+DC PPLD QQ P QELVA DL
Sbjct: 117 ------PPRCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDL 170
Query: 218 HGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPR 277
HG EW FRHI+RGQPRRHLLTTGWS+FVS K LV+GDA +FLRG++GELR+G+RR ++ +
Sbjct: 171 HGNEWHFRHIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQ 230
Query: 278 NGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPIC 337
+ +P S++S + + VL+ ++A+ST ++F VFY PR + ++F++ KY++ + +
Sbjct: 231 SNMPSSVISSHSMHLGVLATASHAISTGTLFSVFYKPRTSRSEFIVSINKYLEARNHKLS 290
Query: 338 IGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSP 397
+G RFKMRFE D+ PERR +G + G+ D W +S+WR L V+WDE ++VSP
Sbjct: 291 VGMRFKMRFEGDEVPERRFSGTIVGVEDNKSSVWADSEWRSLKVQWDEPSSILRPDRVSP 350
Query: 398 WEIDRSVSLPPLSIQSSPRMKKLR 421
WE++ VS PP + Q + R K+ R
Sbjct: 351 WELEPLVSTPPANSQPTQRNKRSR 374
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 56/96 (58%), Positives = 73/96 (76%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYT 732
SQS RSCTKVH QG VGRA+DL R +GY DLL +LE +F++EG L K W ++YT
Sbjct: 541 SQSRQIRSCTKVHMQGMAVGRAVDLTRFDGYEDLLRKLEEMFDIEGELCGATKKWLVVYT 600
Query: 733 DSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
D+E+D+M+VGDDPW EFC+ V K+ IYT EEV+K++
Sbjct: 601 DNEDDMMMVGDDPWLEFCSVVRKMFIYTPEEVKKLS 636
>gi|357152133|ref|XP_003576020.1| PREDICTED: auxin response factor 23-like [Brachypodium distachyon]
Length = 882
Score = 384 bits (985), Expect = e-103, Method: Compositional matrix adjust.
Identities = 213/489 (43%), Positives = 297/489 (60%), Gaps = 38/489 (7%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKV 114
+++ ELW ACAGPL ++PK G+ V YFPQGH+EQV AS++ + ++L +I C+V
Sbjct: 66 ALFSELWSACAGPLVTVPKVGDKVFYFPQGHIEQVEASTNQVAEQRMQLYNLPWKILCEV 125
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEE---GGGRSPTKSTPHM 171
++V+L A + DEVY Q+ LLP E+KQ E+ EE +P + H
Sbjct: 126 MNVELKAESDTDEVYAQLTLLP---------ESKQQEENASTEEVSAAPSAAPVRPRVHS 176
Query: 172 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQ 231
FCKTLTASDTSTHGGFSV RR A++C PPLD +Q P+QEL AKDLHG EWRFRHI+RGQ
Sbjct: 177 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELTAKDLHGAEWRFRHIFRGQ 236
Query: 232 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSY 291
PRRHLL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++ + +P S++S + +
Sbjct: 237 PRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTNVPSSVISSHSMH 296
Query: 292 PNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDS 351
VL+ +AV+T +MF V+Y PR + A+FV+PY +Y++ + IG RFKMRFE +++
Sbjct: 297 LGVLATAWHAVNTGTMFTVYYKPRTSPAEFVVPYDRYMESLKRNYSIGMRFKMRFEGEEA 356
Query: 352 PERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSI 411
PE+R G + G+ D DP W SKWR L VRWDE E+VSPW+I+ +VS PP++
Sbjct: 357 PEQRFTGTIVGMGDSDPAGWAESKWRSLKVRWDEASSIPRPERVSPWQIEPAVSPPPINP 416
Query: 412 QSSPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSS--KVLQGQENVGFVSPLYG-- 467
PR K+ R + A D A+ E+ + + + Q QEN +P G
Sbjct: 417 LPVPRTKRPRPNVIASTTDSSTQAKEVAPKVAAETQQHALQRAFQTQEN---ATPKTGFG 473
Query: 468 ----CDT----VNHPLGFEMRA---PAHQSLALNGIRKDNINELVRALPTSYTGFVESNR 516
DT V P GFE P L NG + + P SY+ + +
Sbjct: 474 DGSELDTTQKSVLQPSGFEREKNNIPTQIKLGSNGW-------MQMSRPESYSEMLSGFQ 526
Query: 517 FPKVLQGQE 525
PK +Q Q+
Sbjct: 527 PPKDVQNQQ 535
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/93 (55%), Positives = 69/93 (74%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDV 738
RSC KVHKQG +GR++DL + NGY +L+SEL+ +F+ G L+ K W ++YTD E D+
Sbjct: 754 RSCKKVHKQGIALGRSVDLTKFNGYMELVSELDDMFDFNGDLKSSNKEWMVVYTDHEGDM 813
Query: 739 MVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGT 771
M+VGDDPW EFCN V KI IYT+EEV++M G
Sbjct: 814 MLVGDDPWSEFCNIVHKIFIYTREEVQRMAPGA 846
>gi|242055485|ref|XP_002456888.1| hypothetical protein SORBIDRAFT_03g044630 [Sorghum bicolor]
gi|241928863|gb|EES02008.1| hypothetical protein SORBIDRAFT_03g044630 [Sorghum bicolor]
Length = 704
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/417 (45%), Positives = 274/417 (65%), Gaps = 14/417 (3%)
Query: 47 SSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFD 105
S + S+ +Y ELW ACAGPL ++P+ G++V YFPQGH+EQV AS + ++ +D
Sbjct: 11 SQAPSNSGDPLYPELWRACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVAGNQMRLYD 70
Query: 106 LQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPT 165
L ++ C+V++V+L A + DEVY Q+ L+P+PE Q + +
Sbjct: 71 LPSKLLCRVLNVELKAETDTDEVYAQIMLMPEPE---------QTDVAAEKASSASAASP 121
Query: 166 KSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFR 225
+ FCKTLTASDTSTHGGFSV RR A++C PPLD Q P+QELVAKDLHG+EWRFR
Sbjct: 122 RPAVRSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFR 181
Query: 226 HIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSIL 285
HI+RGQPRRHLL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++ + +P S++
Sbjct: 182 HIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQLSNVPSSVI 241
Query: 286 SKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMR 345
S Q+ + VL+ +A++TKSMF V+Y PR + ++F+IPY +Y++ + N IG RF+MR
Sbjct: 242 SSQSMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMR 301
Query: 346 FEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS 405
FE +++PE+R G + G +LDP WP+S WR L VRWDE ++VSPW+I+ + S
Sbjct: 302 FEGEEAPEQRFTGTIVGCENLDPL-WPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEPASS 360
Query: 406 LPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGGV---LDFEESVRSSKVLQGQENV 459
P + S R+K+ R P P+ V + +D ++ + VLQGQE +
Sbjct: 361 PPVNPLPLSSRVKRPRQNAPPPSPEASVLTKESAAKIDIDSAQTQHQNSVLQGQEQM 417
>gi|222619023|gb|EEE55155.1| hypothetical protein OsJ_02959 [Oryza sativa Japonica Group]
Length = 658
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 251/640 (39%), Positives = 339/640 (52%), Gaps = 89/640 (13%)
Query: 126 DEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKS---TPHMFCKTLTASDTS 182
DEVY QV+L+ + E + ++ ED G +G G K PHMFCKTLTASDTS
Sbjct: 41 DEVYAQVSLVA--DNEEVERRMREGED-GAACDGEGEDAVKRPARIPHMFCKTLTASDTS 97
Query: 183 THGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWS 242
THGGFSVPRRAAEDCFPPLDY QRP QELVAKDLHG EWRFRHIYRGQPRRHLLTTGWS
Sbjct: 98 THGGFSVPRRAAEDCFPPLDYSLQRPFQELVAKDLHGTEWRFRHIYRGQPRRHLLTTGWS 157
Query: 243 IFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVANAV 302
F+++K LVSGDAVLFLRG+DGELRLG+RR+ Q +N P L Q S + LS VA+AV
Sbjct: 158 GFINKKKLVSGDAVLFLRGEDGELRLGVRRAAQLKNASPFPALHNQISNTSSLSEVAHAV 217
Query: 303 STKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCNGVVTG 362
+ KS+FH++Y+PR + ++F+IPY K+++ P +G RFK+R+E +D+ ERR G++ G
Sbjct: 218 AVKSIFHIYYNPRLSQSEFIIPYWKFMRSFSQPFSVGMRFKLRYESEDASERRRTGIIIG 277
Query: 363 ITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRT 422
+ DP W SKW+CL+V+WD+ + VSPWEI+ S S+ + S+P K+L++
Sbjct: 278 SREADPM-WHGSKWKCLVVKWDDDVECRRPNGVSPWEIELSGSVSGSHL-STPHSKRLKS 335
Query: 423 GLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHPLGFEMRAP 482
PD V G DF ES R KVLQGQE L G T + + +A
Sbjct: 336 CFPQVNPDI-VLPNGSVSSDFAESARFHKVLQGQE-------LLGLKTRDGTVNTASQAT 387
Query: 483 AHQSLALNGIRKDNIN---------ELVRALPT-----SY--TGFVESNRFPKVLQGQEI 526
++ R +IN L P+ SY +GF ES RF +VLQGQE+
Sbjct: 388 EARNFQYTDERSCSINMSNNILGVPRLGVKTPSGNPGFSYHCSGFGESQRFQEVLQGQEV 447
Query: 527 C-PLRSLT--------------------GKVDLNLGTWGKPNFGCNSMNMYQASKPN--- 562
P R T G L G + G + + QAS P+
Sbjct: 448 FRPYRGGTLSDACIRGSGFRQPDGNHAPGAAFKWLAPQGCDHHGITTSVLPQASSPSSVL 507
Query: 563 IYPPPSESLSNMFFPYG--DMPKTVQHHTMPPYASNLQRENVKLNSSSIQMPAIGAEIRK 620
++P S + + + YG D + +H + P ++ R + L + +
Sbjct: 508 MFPQTSSKMPGLEYIYGCLDRNENSRHFKIGP-TQDMTRTDQTLR--------LWPHLIS 558
Query: 621 ANLLNEHKPVENIPTPTFKANMRSHKDGSFNGTAAGCKLFGFSLTSETPTPSSQSPGK-- 678
+L+E E + +P A H+ + GCK+FG SLT + G
Sbjct: 559 GKVLDECTRNEKLHSPVSGAE---HESNNKCLNTNGCKIFGISLTEKAQAGDEVDCGNAS 615
Query: 679 -----------------RSCTKVHKQGSLVGRAIDLWRLN 701
SC VH+Q +VGR +D+ +N
Sbjct: 616 YHSRLQSLKPQMPKSLGSSCATVHEQRPVVGRVVDISAVN 655
>gi|301793217|emb|CBA11999.1| putative auxin response factor 1 [Illicium parviflorum]
Length = 684
Score = 380 bits (977), Expect = e-102, Method: Compositional matrix adjust.
Identities = 192/416 (46%), Positives = 267/416 (64%), Gaps = 13/416 (3%)
Query: 41 SSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPI 99
S+ S+ + S + ++Y ELWHACAGPL ++P++G V YFPQGH+EQ+ AS++
Sbjct: 6 STPSSGALGSVAYKDALYQELWHACAGPLVTVPREGERVYYFPQGHMEQLEASTNQGADQ 65
Query: 100 EVPNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEG 159
++P F L +I C+VV VQL A E DEVY Q+ LLP+PE + + +
Sbjct: 66 QMPLFSLPAKILCRVVHVQLRAEPETDEVYAQITLLPEPEQGEITSPDPPIPEP------ 119
Query: 160 GGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHG 219
+ T H FCKTLTASDTSTHGGFSV RR A++C P LD Q P QELVA DLHG
Sbjct: 120 -----PRCTVHSFCKTLTASDTSTHGGFSVLRRHADECLPQLDMSQHPPWQELVATDLHG 174
Query: 220 VEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNG 279
EW FRHI+RGQPRRHLLTTGWS+FVS K LV+GDA +FLRG++GELR+G+RR ++ +
Sbjct: 175 NEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQPSN 234
Query: 280 LPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIG 339
+P S++S + + VL+ ++A+ST ++F VFY PR + ++F+I KY++ + + +G
Sbjct: 235 MPSSVISSHSMHLGVLATASHAISTGTLFSVFYKPRTSQSEFIISLNKYLEAKNHKLSVG 294
Query: 340 TRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWE 399
RFKMRFE +D+PERR +G + G+ D RW +S+WR L V+WDE +VSPWE
Sbjct: 295 MRFKMRFEGEDAPERRFSGTIIGVGDAVSSRWADSEWRSLKVQWDEPSSIPRPVRVSPWE 354
Query: 400 IDRSVSLPPLSIQSSPRMKKLR-TGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQ 454
++ V+ P + Q +PR K+ R L PD P +R +D + S LQ
Sbjct: 355 LEPLVAAVPSAPQPTPRSKRARPPALLPSTPDIPACSRWKSHIDAGSAFSHSSGLQ 410
Score = 129 bits (324), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 58/94 (61%), Positives = 72/94 (76%)
Query: 674 QSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTD 733
QS RSCTKVH QG VGRA+DL RL+ Y DLL++LE +FN+EG L P K W+++YTD
Sbjct: 551 QSRQTRSCTKVHLQGMAVGRAVDLSRLDCYEDLLNKLEQMFNIEGELSGPTKKWQLVYTD 610
Query: 734 SENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
E+D M+VGDDPWHEFC V KI+IYT EEV+ +
Sbjct: 611 DEDDTMLVGDDPWHEFCGIVRKINIYTPEEVKNL 644
>gi|413952426|gb|AFW85075.1| hypothetical protein ZEAMMB73_374158 [Zea mays]
Length = 393
Score = 380 bits (975), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/348 (52%), Positives = 243/348 (69%), Gaps = 21/348 (6%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
ELWHACAGP+ +LP++G++VVY PQGHL DL P + C+V DV+L
Sbjct: 24 ELWHACAGPVVALPRRGSLVVYLPQGHLAAAGGGDV-------AADLPPHVVCRVADVEL 76
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQ------LEDLGVDEEGGGRSPTKSTPHMFC 173
A+ DEV ++AL+ + E G NL +ED + + G HMFC
Sbjct: 77 CADAATDEVCARLALVAEGEAFGRNLGGGGVEGDDGMEDFDAERKSG-------MLHMFC 129
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
KTLTASDTSTHGGFSVPRRAAEDCFPPLDY Q RPSQELVAKDLHG +W+FRHIYRGQPR
Sbjct: 130 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRHIYRGQPR 189
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
RHLLTTGWS FV++K LVSGDAVLFLRG DGELRLG+RR++Q +N + ++ +
Sbjct: 190 RHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALFEDFNSDSTKRH 249
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
L+ VA+++ +S+FH+ Y+PRAT ++++IPY K++K + +P+CIG R + +D E
Sbjct: 250 SLTAVADSLKNRSVFHISYNPRATASEYIIPYAKFLKSLNHPVCIGARINFQCHNEDVSE 309
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
RR +GVV I+++DP +WP SKWR L+VRW++ + Q++VSPWEI+
Sbjct: 310 RR-SGVVVRISEIDPMKWPGSKWRSLLVRWEDGAECNGQDRVSPWEIE 356
>gi|295844286|gb|ADG43140.1| auxin response factor 6 [Zea mays]
gi|414587106|tpg|DAA37677.1| TPA: hypothetical protein ZEAMMB73_822305 [Zea mays]
Length = 657
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 187/373 (50%), Positives = 250/373 (67%), Gaps = 16/373 (4%)
Query: 54 SSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIE--VPNFDLQPQIF 111
S ++Y ELWHACAGPL ++P++G V YFPQGH+EQ+ +S+ ++ +P FDL P+I
Sbjct: 16 SDALYQELWHACAGPLVTVPRQGERVYYFPQGHMEQLEASAHHQQLDQYLPMFDLPPKIL 75
Query: 112 CKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHM 171
C+VV+V+L A ++DEVY Q+ L P EA Q E +D E R K T H
Sbjct: 76 CRVVNVELRAEADSDEVYAQIMLQP---------EADQNELTSLDAEPQERE--KCTAHS 124
Query: 172 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQ 231
FCKTLTASDTSTHGGFSV RR AE+C P LD Q P QELVAKDLHG EW FRHI+RGQ
Sbjct: 125 FCKTLTASDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQ 184
Query: 232 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSY 291
P+RHLLTTGWS+FVS K LVSGDA +F+RG++GELR+G+RR ++ N +P S++S + +
Sbjct: 185 PKRHLLTTGWSVFVSSKRLVSGDAFIFMRGENGELRVGVRRLMRQVNSMPSSVISSHSMH 244
Query: 292 PNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDS 351
VL+ ++A+ST ++F VFY PR + +DF++ KY++ I +G RFKMRFE DD+
Sbjct: 245 LGVLATASHAISTGTLFSVFYKPRTSRSDFIVSVNKYLEAKKQKISVGMRFKMRFEGDDA 304
Query: 352 PERRCNGVVTGITDLDPYR---WPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPP 408
PERR +G + GI L W +S WR L V+WDE +++SPWE++ + P
Sbjct: 305 PERRFSGTIIGIGSLPAMSKSLWADSDWRSLKVQWDEPSSILRPDRISPWEVEPLDAANP 364
Query: 409 LSIQSSPRMKKLR 421
S Q R K+ R
Sbjct: 365 QSPQPPLRAKRPR 377
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 76/108 (70%)
Query: 661 GFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLL 720
+ +SE SQS RSCTKV QG VGRA+DL +L+GY+DL +LE +F+++G L
Sbjct: 528 ALAASSERSPLESQSRQVRSCTKVIMQGMAVGRAVDLTKLSGYSDLCQKLEEMFDIQGEL 587
Query: 721 RDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
K WR+++TD E+D+M+VGDDPW EFC V +I+IYT EE +K+T
Sbjct: 588 GSTLKKWRVIFTDDEDDMMLVGDDPWDEFCRMVKRIYIYTYEEAKKLT 635
>gi|356543365|ref|XP_003540131.1| PREDICTED: auxin response factor 1-like [Glycine max]
Length = 665
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/376 (50%), Positives = 258/376 (68%), Gaps = 12/376 (3%)
Query: 47 SSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFD 105
S++ + + ++Y ELWHACAGPL +LP++G V YFPQGH+EQ+ AS + ++P+F+
Sbjct: 3 SAAPGATNDALYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMNQGLEQQMPSFN 62
Query: 106 LQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPT 165
L +I CKVV+V L A E DEVY Q+ LLP EA Q E D+ SP
Sbjct: 63 LPSKILCKVVNVHLRAEPETDEVYAQITLLP---------EADQSEVTSPDDPLP-ESP- 111
Query: 166 KSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFR 225
+ T H FCKTLTASDTSTHGGFSV RR A+DC PPLD QQ P QELVA DLHG EW FR
Sbjct: 112 RCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFR 171
Query: 226 HIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSIL 285
HI+RGQPRRHLLTTGWS+FVS K LV+GDA +FLRG++GELR+G+RR ++ ++ +P S++
Sbjct: 172 HIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQSNMPSSVI 231
Query: 286 SKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMR 345
S + + VL+ ++A++T ++F VFY PR + ++F++ KY++ + + +G RFKMR
Sbjct: 232 SSHSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARSHKLSVGMRFKMR 291
Query: 346 FEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS 405
FE D+ PERR +G + G+ D W +S+WR L V+WDE ++VSPWE++ VS
Sbjct: 292 FEGDEVPERRFSGTIVGVGDNKSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVS 351
Query: 406 LPPLSIQSSPRMKKLR 421
PP + Q S R K+ R
Sbjct: 352 TPPTNPQPSQRNKRSR 367
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/138 (48%), Positives = 89/138 (64%), Gaps = 15/138 (10%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYT 732
SQS RSCTKVH QG VGRA+DL R +GY DLL +LE +F++ G L K W+++YT
Sbjct: 535 SQSRQIRSCTKVHMQGMAVGRAVDLTRFDGYEDLLRKLEEMFDITGELCGSTKKWQVVYT 594
Query: 733 DSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT--IGTTDDTQSCLDQAPVIMEVSV 790
D+E+D+M+VGDDPW EFC+ V KI IYT EEV K++ IG P+ EV
Sbjct: 595 DNEDDMMMVGDDPWLEFCSIVRKIFIYTAEEVRKLSPKIGL-----------PISEEVKP 643
Query: 791 SK--SSSVSQPDSSPTVV 806
SK S +V+ P+ ++V
Sbjct: 644 SKMDSEAVANPEDQSSIV 661
>gi|356560035|ref|XP_003548301.1| PREDICTED: auxin response factor 1-like [Glycine max]
Length = 665
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 189/376 (50%), Positives = 257/376 (68%), Gaps = 12/376 (3%)
Query: 47 SSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFD 105
S++ + + ++Y ELWHACAGPL +LP++G V YFPQGH+EQ+ AS + ++P+F+
Sbjct: 3 SAAPGATNDALYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMNQGLEQQMPSFN 62
Query: 106 LQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPT 165
L +I CKVV+V L A E DEVY Q+ LLP EA Q E D+ SP
Sbjct: 63 LPSKILCKVVNVHLRAEPETDEVYAQITLLP---------EADQSEVTSPDDPLP-ESP- 111
Query: 166 KSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFR 225
+ T H FCKTLTASDTSTHGGFSV RR A+DC PPLD QQ P QELVA DLHG EW FR
Sbjct: 112 RCTVHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFR 171
Query: 226 HIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSIL 285
HI+RGQPRRHLLTTGWS+FVS K LV+GDA +FLRG++GELR+G+RR ++ + +P S++
Sbjct: 172 HIFRGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQHSNMPSSVI 231
Query: 286 SKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMR 345
S + + VL+ ++A++T ++F VFY PR + ++F++ KY++ + + +G RFKMR
Sbjct: 232 SSHSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEAQSHKLSVGMRFKMR 291
Query: 346 FEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS 405
FE D+ PERR +G + G+ D W +S+WR L V+WDE ++VSPWE++ VS
Sbjct: 292 FEGDEVPERRFSGTIVGVEDNKSLVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLVS 351
Query: 406 LPPLSIQSSPRMKKLR 421
PP + Q S R K+ R
Sbjct: 352 NPPTNSQPSQRNKRSR 367
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 56/96 (58%), Positives = 73/96 (76%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYT 732
SQS RSCTKVH QG VGRA+DL R +GY DLL +LE +F++ G L K W+++YT
Sbjct: 535 SQSRQIRSCTKVHMQGMAVGRAVDLTRFDGYEDLLRKLEEMFDINGELCGSTKEWQVVYT 594
Query: 733 DSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
D+E+D+M+VGDDPW EFC+ V KI IYT EEV+K++
Sbjct: 595 DNEDDMMMVGDDPWLEFCSIVRKIFIYTAEEVKKLS 630
>gi|224129786|ref|XP_002328802.1| predicted protein [Populus trichocarpa]
gi|222839100|gb|EEE77451.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 379 bits (974), Expect = e-102, Method: Compositional matrix adjust.
Identities = 196/427 (45%), Positives = 272/427 (63%), Gaps = 22/427 (5%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASS--SAFPPIEVPNFDLQPQIFCK 113
++Y ELWHACAGPL +LP++G +V YFPQGH+EQ+ +S P ++P F+L +I CK
Sbjct: 22 ALYKELWHACAGPLVTLPREGELVYYFPQGHMEQLEASMHQGMEP-QMPLFNLPSKILCK 80
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFC 173
VV+VQ A E DEVY Q+ LLP+P+ + L + P + T H FC
Sbjct: 81 VVNVQRRAEPETDEVYAQITLLPEPDQSEVTSPDPPLPE-----------PERCTVHSFC 129
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
KTLTASDTSTHGGFSV RR A+DC PPLD QQ P QELVA DLHG EW FRHI+RGQPR
Sbjct: 130 KTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRHIFRGQPR 189
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
RHLLTTGWS+FVS K LV+GDA +FLRG++GELR+G+RR ++ + +P S++S Q+ +
Sbjct: 190 RHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQTNMPSSVISSQSMHLG 249
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
VL+ ++A++T ++F VFY PR + ++F++ KY+++ + + +G RFKMRFE ++ PE
Sbjct: 250 VLATASHAIATGTLFSVFYKPRTSRSEFIVSLNKYLEVRNHKLSVGMRFKMRFEGEEVPE 309
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS 413
RR +G + G+ D W +S WR L V+WDE E+VS WE++ V+ P + Q
Sbjct: 310 RRFSGTIVGVGDNISSGWADSDWRSLKVQWDEPSSIMRPERVSHWELEPLVATTPSNSQP 369
Query: 414 SPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVG---FVSPLYGCDT 470
R K+ R + P P +SA G ++ V SS + G G + SP +
Sbjct: 370 VQRNKRARPYV-IPSPTADLSALGM----WKSPVESSALSYGDSQRGRDLYSSPNFSTTA 424
Query: 471 VNHPLGF 477
+ LGF
Sbjct: 425 KVNSLGF 431
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 70/95 (73%)
Query: 674 QSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTD 733
QS RSCTKVH QG VGRA+DL + Y DLL +LE +F++EG L K W+++YTD
Sbjct: 533 QSRQIRSCTKVHMQGVAVGRAVDLTQFKRYEDLLRKLEEMFDIEGELSGSTKKWQVVYTD 592
Query: 734 SENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
+E+D+M VGDDPW+EFC V KI IYT EEV++++
Sbjct: 593 NEDDMMKVGDDPWNEFCGMVKKIFIYTSEEVKRLS 627
>gi|36939190|gb|AAQ86959.1| ETTIN-like auxin response factor [Triticum aestivum]
Length = 632
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 210/436 (48%), Positives = 273/436 (62%), Gaps = 24/436 (5%)
Query: 108 PQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDL--GVDEEGGGRSPT 165
P +FC+VVDV L A+ DEVY QV+LL E + + E+ G E+ G
Sbjct: 34 PHVFCRVVDVNLQADPATDEVYAQVSLLVDNEEAKRRMRQGESEEACDGDGEDTGAAKRR 93
Query: 166 KSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFR 225
PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDY QRPSQELVAKDLHG EWRFR
Sbjct: 94 ARMPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNLQRPSQELVAKDLHGTEWRFR 153
Query: 226 HIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSIL 285
HIYRGQPRRHLLTTGWS FV++K LVSGDAVLFLRG+DG L+LG+RR+ Q +N P L
Sbjct: 154 HIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGVLQLGVRRAAQLKNVSPFPAL 213
Query: 286 SKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMR 345
Q+S L VA+AV+ KS+FH++Y+PR ++F++PY K+++ P +G RFKM+
Sbjct: 214 FNQDSSLRSLGNVAHAVAMKSIFHIYYNPRLCESEFIVPYWKFMRSFSQPFSVGMRFKMK 273
Query: 346 FEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS 405
+E +D+ ERR G++TG + D + SKW+CL+VRWD+ + +VSPWEI+ + S
Sbjct: 274 YENEDASERRSTGMITGSRESD-LKSHGSKWKCLVVRWDDDVECRRLNRVSPWEIELAGS 332
Query: 406 LPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPL 465
+ + SSP K+L+ L PD + + G DF ES R KVLQGQE +G +
Sbjct: 333 VSGSHL-SSPHSKRLKPCLPQVNPDMLLPS-GSVSSDFAESARFHKVLQGQELLGSKAH- 389
Query: 466 YGCDTVNHPLGFEMRAPAHQSLALNGIRKDNINEL---------VRALPTSY------TG 510
D + +A ++ + R +IN R P ++ +G
Sbjct: 390 ---DGTVNSASEASQASEARNFQYSDDRNCSINMCNIPGVPGLGARTPPENHGFSYHCSG 446
Query: 511 FVESNRFPKVLQGQEI 526
F ES RF KVLQGQE+
Sbjct: 447 FGESQRFQKVLQGQEV 462
>gi|350540016|ref|NP_001234871.1| auxin response factor 1 [Solanum lycopersicum]
gi|299118178|gb|ADJ10892.1| auxin response factor 1 [Solanum lycopersicum]
Length = 654
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/379 (48%), Positives = 253/379 (66%), Gaps = 12/379 (3%)
Query: 51 SSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQ 109
+S ++++Y ELWHACAGPL ++P++G V YFPQGH+EQ+ AS+ +P+F+L +
Sbjct: 17 ASANNALYKELWHACAGPLVTVPREGERVYYFPQGHMEQLEASTHQGVDQHLPSFNLPAK 76
Query: 110 IFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTP 169
I CKV++VQL A E DEVY Q+ LLP+P+ + L + P K T
Sbjct: 77 ILCKVMNVQLRAESETDEVYAQITLLPEPDQGEITSPDPPLPE-----------PEKCTV 125
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
H FCKTLTASDTSTHGGFSV RR A++C PPLD QQ P QELVA DLHG EW FRHI+R
Sbjct: 126 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQQPPWQELVASDLHGNEWHFRHIFR 185
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQN 289
GQPRRHLLTTGWS+FVS K LV+GDA +FLRG GELR+G+RR ++ N +P S++S +
Sbjct: 186 GQPRRHLLTTGWSVFVSAKKLVAGDAFIFLRGDSGELRVGVRRLMRQLNNMPSSVISSHS 245
Query: 290 SYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMD 349
+ VL+ ++A+ T ++F VFY PR + ++F++ KY++ + + +G RFKMRFE +
Sbjct: 246 MHLGVLATASHAIMTGTLFSVFYKPRTSQSEFIVSVNKYLEARNHKLSVGMRFKMRFEGE 305
Query: 350 DSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPL 409
+ PERR +G + G+ D RWP+S+WR L V WDE ++VSPW+++ V+ P
Sbjct: 306 EVPERRFSGTIVGVGDNPSSRWPDSEWRSLKVHWDEPSSILRPDRVSPWDMEPLVAATPT 365
Query: 410 SIQSSPRMKKLRTGLQAPP 428
+ Q R K+ R + P
Sbjct: 366 NTQPPQRNKRARPSVLPSP 384
Score = 133 bits (334), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 130/245 (53%), Gaps = 22/245 (8%)
Query: 540 LGTWGKPNFGCNSMNMYQASK-PNIYPPPSESLSNMFFPYGD---MPKTVQHHTMPPYAS 595
LG W P +S + S+ ++YP P S + YG+ MP + + TM ++S
Sbjct: 391 LGMWKSPVDSPSSFSYCDPSRGRDLYPSPKLSSAAKGLGYGENGSMPLSTK--TMY-WSS 447
Query: 596 NLQRENVKLNSSSIQMPAIGAEIRKANLLN------------EHKPVENIPTPTFKANMR 643
+ + +S + PA G + LL+ VE+ P P+ +
Sbjct: 448 QSETCTESVAPASEKRPANGCRLFGIELLDCPTIDESSSVAMPSAVVEDQPVPSLNVDSD 507
Query: 644 SHKDGSFNGTAAGCKLFGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGY 703
+ + S + C+ SL S T SQS RSCTKVH QG VGRA+DL RL+ Y
Sbjct: 508 RNSEPSNPIPSVSCEPEKSSLRS---THESQSKQIRSCTKVHMQGKAVGRAVDLTRLDSY 564
Query: 704 NDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEE 763
DLL +LE +F +EG LR K W+++YTD E+D+M+VGDDPWH FC+ V KI++YT EE
Sbjct: 565 EDLLKKLEVMFEIEGELRGSTKKWQVVYTDDEDDMMMVGDDPWHGFCSMVRKIYVYTAEE 624
Query: 764 VEKMT 768
+K++
Sbjct: 625 AKKLS 629
>gi|225459961|ref|XP_002266947.1| PREDICTED: auxin response factor 1-like isoform 1 [Vitis vinifera]
Length = 645
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/384 (48%), Positives = 257/384 (66%), Gaps = 12/384 (3%)
Query: 46 NSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNF 104
N S +++ ++Y ELWHACAGPL ++P++ V YFPQGH+EQ+ AS ++P+F
Sbjct: 11 NGSKLGTVNDALYKELWHACAGPLVNVPREQERVYYFPQGHMEQLEASMHQGLDQKMPSF 70
Query: 105 DLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSP 164
+L +I CKVV+V L A E DEVY QV LLP+P+ + L + P
Sbjct: 71 NLPSKILCKVVNVHLRAEPETDEVYAQVTLLPEPDQSEITSPDPPLPE-----------P 119
Query: 165 TKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRF 224
T H FCKTLTASDTSTHGGFSV RR A++C PPLD Q P QELVAKDLHG EW F
Sbjct: 120 QSCTVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQNPPWQELVAKDLHGNEWHF 179
Query: 225 RHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSI 284
RHI+RGQPRRHLLTTGWS+FVS K L +GDA +FLRG++GELR+G+RR ++ N +P S+
Sbjct: 180 RHIFRGQPRRHLLTTGWSVFVSSKRLAAGDAFIFLRGENGELRVGVRRLMRQLNNVPPSV 239
Query: 285 LSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKM 344
+S + + VL+ ++A++T ++F VFY PRA+ ++F++ KY++ + + +G RFKM
Sbjct: 240 ISSHSMHLGVLATASHAITTGTLFSVFYKPRASPSEFIVSVNKYLEARNHKVSVGMRFKM 299
Query: 345 RFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSV 404
RFE D++PERR +G + G+ D W +S+WR L V+WDE E+VSPWE++ V
Sbjct: 300 RFEGDEAPERRFSGTIVGVGDTGSSGWTDSEWRSLKVQWDEPSSILRPERVSPWELEPLV 359
Query: 405 SLPPLSIQSSPRMKKLRTGLQAPP 428
+ PL+ Q R K+ R+ + + P
Sbjct: 360 TETPLTAQPMQRSKRPRSPVLSSP 383
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 74/95 (77%)
Query: 674 QSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTD 733
QS RSCTKVH QG VGRA+DL + + Y +LLS+LE +F+++G L P K W+++YTD
Sbjct: 516 QSRQIRSCTKVHMQGMAVGRAVDLTQFSSYKELLSKLEEMFDIKGELCGPTKKWQVVYTD 575
Query: 734 SENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
E+D+M+VGDDPWHEFC+ V KI IYT EEV++++
Sbjct: 576 DEDDMMMVGDDPWHEFCSMVRKIFIYTVEEVKELS 610
>gi|297734755|emb|CBI16989.3| unnamed protein product [Vitis vinifera]
Length = 643
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/384 (48%), Positives = 257/384 (66%), Gaps = 12/384 (3%)
Query: 46 NSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNF 104
N S +++ ++Y ELWHACAGPL ++P++ V YFPQGH+EQ+ AS ++P+F
Sbjct: 9 NGSKLGTVNDALYKELWHACAGPLVNVPREQERVYYFPQGHMEQLEASMHQGLDQKMPSF 68
Query: 105 DLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSP 164
+L +I CKVV+V L A E DEVY QV LLP+P+ + L + P
Sbjct: 69 NLPSKILCKVVNVHLRAEPETDEVYAQVTLLPEPDQSEITSPDPPLPE-----------P 117
Query: 165 TKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRF 224
T H FCKTLTASDTSTHGGFSV RR A++C PPLD Q P QELVAKDLHG EW F
Sbjct: 118 QSCTVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQNPPWQELVAKDLHGNEWHF 177
Query: 225 RHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSI 284
RHI+RGQPRRHLLTTGWS+FVS K L +GDA +FLRG++GELR+G+RR ++ N +P S+
Sbjct: 178 RHIFRGQPRRHLLTTGWSVFVSSKRLAAGDAFIFLRGENGELRVGVRRLMRQLNNVPPSV 237
Query: 285 LSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKM 344
+S + + VL+ ++A++T ++F VFY PRA+ ++F++ KY++ + + +G RFKM
Sbjct: 238 ISSHSMHLGVLATASHAITTGTLFSVFYKPRASPSEFIVSVNKYLEARNHKVSVGMRFKM 297
Query: 345 RFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSV 404
RFE D++PERR +G + G+ D W +S+WR L V+WDE E+VSPWE++ V
Sbjct: 298 RFEGDEAPERRFSGTIVGVGDTGSSGWTDSEWRSLKVQWDEPSSILRPERVSPWELEPLV 357
Query: 405 SLPPLSIQSSPRMKKLRTGLQAPP 428
+ PL+ Q R K+ R+ + + P
Sbjct: 358 TETPLTAQPMQRSKRPRSPVLSSP 381
Score = 122 bits (306), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 74/95 (77%)
Query: 674 QSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTD 733
QS RSCTKVH QG VGRA+DL + + Y +LLS+LE +F+++G L P K W+++YTD
Sbjct: 514 QSRQIRSCTKVHMQGMAVGRAVDLTQFSSYKELLSKLEEMFDIKGELCGPTKKWQVVYTD 573
Query: 734 SENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
E+D+M+VGDDPWHEFC+ V KI IYT EEV++++
Sbjct: 574 DEDDMMMVGDDPWHEFCSMVRKIFIYTVEEVKELS 608
>gi|357126622|ref|XP_003564986.1| PREDICTED: auxin response factor 4-like [Brachypodium distachyon]
Length = 814
Score = 377 bits (968), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/409 (45%), Positives = 274/409 (66%), Gaps = 20/409 (4%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKVV 115
++ ELWHACAGPL ++P+ G++V YFPQGH+EQV AS + ++ +DL ++ C V+
Sbjct: 19 LFNELWHACAGPLVTVPRVGDLVFYFPQGHIEQVEASMNQVADNQMRLYDLPSKLLCSVI 78
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHM--FC 173
+V+L A + DEVY QV L+P+ ++ V++ + T + P + FC
Sbjct: 79 NVELKAEADTDEVYAQVMLIPE----------NDQNEMAVEKSSSKAATTLAKPAVRSFC 128
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
KTLTASDTSTHGGFSV RR A++C PPLD Q P+QELVAKDLHG++WRFRHI+RGQPR
Sbjct: 129 KTLTASDTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMDWRFRHIFRGQPR 188
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
RHLL +GWS+FVS K LV+GDA +FLRG+ GELR+G+RR+++ + +P S++S + +
Sbjct: 189 RHLLQSGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRAMRQLSNVPSSVISSHSMHLG 248
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
VL+ +A++TKSMF V+Y PR + ++F+IPY +Y++ + N IG RF+MRFE +++PE
Sbjct: 249 VLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGVRFRMRFEGEEAPE 308
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS 413
+R G + G +LDP WP S WR L VRWDE ++VSPW+I+ + S PP++
Sbjct: 309 QRFTGTIIGSENLDPL-WPESSWRSLKVRWDEPSTIPRPDRVSPWKIEPASS-PPVNPLP 366
Query: 414 SPRMKKLRTGL-QAPPPDYPVSARGGGVLDFEESV----RSSKVLQGQE 457
R+K+ R + A P ++ G +D + + ++S VLQGQE
Sbjct: 367 LSRVKRPRPNVPPASPESSALTKEGATKVDVDSAQAQRNQTSMVLQGQE 415
Score = 116 bits (291), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 51/95 (53%), Positives = 71/95 (74%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYT 732
S RSCTKVHKQG +GR++DL + + Y++L +EL+ +F +G L K W+I+YT
Sbjct: 687 SHGASTRSCTKVHKQGVALGRSVDLSKFSDYDELKAELDKMFEFDGELMSSNKNWQIVYT 746
Query: 733 DSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
D+E+D+M+VGDDPW EFC+ V KI IYT+EEV+KM
Sbjct: 747 DNEDDMMLVGDDPWGEFCSIVRKICIYTKEEVQKM 781
>gi|356503887|ref|XP_003520732.1| PREDICTED: auxin response factor 7-like, partial [Glycine max]
Length = 1043
Score = 377 bits (967), Expect = e-101, Method: Compositional matrix adjust.
Identities = 252/770 (32%), Positives = 384/770 (49%), Gaps = 152/770 (19%)
Query: 25 KNNSGCVCYLNSSSSSSSCSANSSSSSSLSSS----------IYFELWHACAGPLTSLPK 74
K N+G C S +A++ + ++ SS +Y ELW ACAG +P+
Sbjct: 369 KGNNGLYCVGLSRRGFYGAAADAENIANDVSSFTQHPCVQDILYTELWRACAGSFVYVPR 428
Query: 75 KGNVVVYFPQGHLEQVASSSAFPP---IEVPNFDLQPQIFCKVVDVQLLANKENDEVYTQ 131
+ V YFPQGHLEQVA+ + P +E+P +DL +I CK+++V+L A +DEVY Q
Sbjct: 429 VDDRVFYFPQGHLEQVAAYTQNQPDSHLEIPVYDLPSKILCKIMNVELKAEAYSDEVYAQ 488
Query: 132 VALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPR 191
V L+P+ + + L E E++ +D+ P+++ + F K LT SDTSTHGGFSVP+
Sbjct: 489 VTLVPEVQKDNLCFE----EEVNIDQ-----IPSRNAAYSFSKILTPSDTSTHGGFSVPK 539
Query: 192 RAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLV 251
+ A++CFPPLD Q P+QE+VAKDL+G EWRFRHIYRGQP+RHLLT+GWS+FV+ K LV
Sbjct: 540 KYADECFPPLDMTLQTPAQEIVAKDLNGFEWRFRHIYRGQPKRHLLTSGWSLFVNAKKLV 599
Query: 252 SGDAVLFLRGKDGELRLGIRRSVQPRNGLPD--SILSKQNSYPNVLSVVANAVSTKSMFH 309
+GD+ +F+RG+ GELR+GIRR+ + + + S++S + +L+ +NAV ++MF
Sbjct: 600 AGDSCIFVRGESGELRVGIRRAAENLSNISQSSSLISGHSMQLGILTNASNAVGNRTMFL 659
Query: 310 VFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPY 369
V+Y P +F++ Q Y+K + IGTR +M+ E+++S RR G + G D+D
Sbjct: 660 VYYRPWTNPFEFIVHLQTYLKSTLQDYPIGTRVQMQHEVEES-LRRLAGTIIGNEDIDSI 718
Query: 370 RWPNSKWRCLMVRWDECIGSD-HQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPP 428
RWP S WR L V+WD + H E+V PW I+ ++S+ K++
Sbjct: 719 RWPGSAWRRLKVQWDAIVEDKMHPERVCPWWIE--------PLESAKEKKQV-------- 762
Query: 429 PDYPVSARGGGVLD----------------------FEESVRSSKVLQGQENVGFVSPLY 466
P P +G +L+ ++ R+ LQGQ+ G P
Sbjct: 763 PALPTKKKGHALLNQRSLPGISGFGKNDVHQNSAGPSSQTRRADGDLQGQDYSGLSPP-- 820
Query: 467 GCDTVNHPLGFEMRAPAHQSLALNGIRKDNINELVR--ALPTSYTGFVESNRFPKVLQGQ 524
PL RAP+ +++R +P + F + NR Q
Sbjct: 821 ------QPL---QRAPS--------------TDIIRPSKVPIRGSRFGKENRNQHPFLKQ 857
Query: 525 EICPLRSLTGKV------DLNLGTWGKPNFGCNSMNMYQASKPNIYPPPSESLSNMFFPY 578
+ PL G+ DL++ + + G S+ M P +ES P+
Sbjct: 858 D--PLHKSLGRSMSLTHEDLSITSSNLTSIGSESLGM----------PSTESRDENDAPF 905
Query: 579 GDMPKTVQHHTMPPYASNLQRENVKLNSSSIQMPAIG-AEIRKANLLNEHKPVENIPTPT 637
G P +S + V L SS ++P++ ++ K + L P+ P T
Sbjct: 906 GQ----------PGSSSTFKLFGVNLIDSSPEIPSVNFVDLNKTSSLPSSPPMGVAPGKT 955
Query: 638 FKANMRSHKDGSFNGTAAGCKLFGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDL 697
K C+ RSCTKV K G+ +GRA+DL
Sbjct: 956 CKK----------------CRCV----------------NNRSCTKVLKLGNALGRAVDL 983
Query: 698 WRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGDDPWH 747
R NGY +L++EL+ +F+ +G L GW + D E D+M +GD PW
Sbjct: 984 ARFNGYTELIAELDSMFDFQGTLISGGSGWHVTCLDDEGDMMQLGDYPWQ 1033
>gi|224119856|ref|XP_002331079.1| predicted protein [Populus trichocarpa]
gi|222872807|gb|EEF09938.1| predicted protein [Populus trichocarpa]
Length = 660
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/426 (46%), Positives = 270/426 (63%), Gaps = 20/426 (4%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKV 114
++Y ELWHACAGPL +LP +G V YFPQGH+EQ+ AS ++P+F+L +I CKV
Sbjct: 17 ALYKELWHACAGPLVTLPCEGERVYYFPQGHMEQLEASMHQGMEQQMPSFNLPSKILCKV 76
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
V+VQ A E DEVY Q+ LLP+P+ + L + P + T H FCK
Sbjct: 77 VNVQRRAEPETDEVYAQITLLPEPDQSEVTSPDPPLPE-----------PERCTVHSFCK 125
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLTASDTSTHGGFSV RR A+DC PPLD QQ P QELVA DLHG EW FRHI+RGQPRR
Sbjct: 126 TLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRHIFRGQPRR 185
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS+FVS K LV+GDA +FLRG++GELR+G+RR ++ + +P S++S Q+ + V
Sbjct: 186 HLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQTNMPSSVISSQSMHLGV 245
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
L+ ++A++T ++F VFY PR + ++F++ KY++ + + +G RFKMRFE ++ PER
Sbjct: 246 LATASHAIATGTLFSVFYKPRTSRSEFIVNLNKYIEAQNHKLSVGMRFKMRFEGEEVPER 305
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSS 414
R +G + G+ D W +S+WR L V WDE E+VSPW+++ V+ P + Q
Sbjct: 306 RFSGTIVGVGDNISSGWADSEWRSLKVHWDEPSSILRPERVSPWDLEPLVATTPSNSQPM 365
Query: 415 PRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVG---FVSPLYGCDTV 471
R K+ R + P P +SA G ++ SV SS G+ G + SP +
Sbjct: 366 QRNKRPRPSV-LPSPTANLSALGM----WKPSVESSAFSYGESQRGRDPYPSPNFSTTAK 420
Query: 472 NHPLGF 477
+ L F
Sbjct: 421 ANSLSF 426
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 80/120 (66%), Gaps = 2/120 (1%)
Query: 674 QSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTD 733
QS RSCTKVH QG VGRA+DL + Y DLL +LE +F++EG L K W+++YTD
Sbjct: 529 QSRQIRSCTKVHMQGVAVGRAVDLTQFERYEDLLRKLEEMFDIEGELSGSTKKWQVVYTD 588
Query: 734 SENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT--IGTTDDTQSCLDQAPVIMEVSVS 791
+E+D+M VGDDPWHEFC+ V KI IY EEV++++ I + D + D A + SV+
Sbjct: 589 NEDDMMKVGDDPWHEFCSMVKKIFIYASEEVKRLSPKIKLSGDEEIKGDSANANADASVN 648
>gi|295844300|gb|ADG43147.1| auxin response factor 13 [Zea mays]
gi|413920956|gb|AFW60888.1| auxin response factor [Zea mays]
Length = 850
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/378 (49%), Positives = 255/378 (67%), Gaps = 13/378 (3%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKVV 115
+Y ELW+ CAGPL ++P+ G+ V YFPQGH+EQV AS++ + +DL +I C+V+
Sbjct: 39 MYTELWNLCAGPLVTVPRVGDKVYYFPQGHIEQVEASTNQVAEQHMQFYDLPWKILCEVM 98
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPT---KSTPHMF 172
+V+L A +NDEVY Q+ LLP E+KQ E+ G EE P + H F
Sbjct: 99 NVELKAEPDNDEVYAQLTLLP---------ESKQPEENGSSEEMPASPPAALARPRVHSF 149
Query: 173 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQP 232
CKTLTASDTSTHGGFSV RR A++C PPLD +Q P+QELVAKDLHGVEWRFRHI+RGQP
Sbjct: 150 CKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFRGQP 209
Query: 233 RRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYP 292
RRHLL +GWS+FVS K LV+GDA +FLRG GELR+G+RR+++ + +P S++S + +
Sbjct: 210 RRHLLQSGWSVFVSAKRLVAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHSMHL 269
Query: 293 NVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSP 352
VL+ +AV+T +MF V+Y PR + A+FV+P +Y++ + IG RFKMRFE +++P
Sbjct: 270 GVLATAWHAVNTGTMFTVYYKPRTSPAEFVVPCDRYMESLKRNYPIGMRFKMRFEGEEAP 329
Query: 353 ERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQ 412
E+R G + G D D W SKWR L VRWDE E+VSPW+I+ +VS PP++
Sbjct: 330 EQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPPPINPL 389
Query: 413 SSPRMKKLRTGLQAPPPD 430
R K+ R+ A P+
Sbjct: 390 PVHRPKRPRSNAVASLPE 407
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 73/99 (73%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYT 732
SQ RSC KVHKQG +GR++DL + NGY +L++EL+ +F+ G L+ +K W ++YT
Sbjct: 711 SQGGSTRSCKKVHKQGMALGRSVDLTKFNGYTELVAELDEMFDFNGELKGCSKEWMVVYT 770
Query: 733 DSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGT 771
D E D+M+VGDDPW+EFC+ V KI +YT+EEV++M G
Sbjct: 771 DYEGDMMLVGDDPWNEFCSMVHKIFVYTREEVQRMNPGA 809
>gi|255573832|ref|XP_002527835.1| Auxin response factor, putative [Ricinus communis]
gi|223532759|gb|EEF34538.1| Auxin response factor, putative [Ricinus communis]
Length = 671
Score = 374 bits (959), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/377 (48%), Positives = 251/377 (66%), Gaps = 14/377 (3%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASS--SAFPPIEVPNFDLQPQIFCK 113
++Y ELWHACAGPL +LP++G V YFPQGH+EQ+ +S P ++P+FDL +I CK
Sbjct: 14 ALYKELWHACAGPLVNLPREGERVYYFPQGHMEQLEASMHQGLEP-QMPSFDLPSKILCK 72
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFC 173
VV+VQ A E DEVY Q+ LLP P+ + L + P + T H FC
Sbjct: 73 VVNVQRKAEPETDEVYAQITLLPDPDQSEVTSPDTPLPE-----------PERCTVHSFC 121
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
KTLTASDTSTHGGFSV RR A+DC PPLD QQ P QELVA DLHG +W FRHI+RGQPR
Sbjct: 122 KTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNQWHFRHIFRGQPR 181
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
RHLLTTGWS+FVS K LV+GDA +FLRG++GELR+G+RR ++ + +P S++S Q+ +
Sbjct: 182 RHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQQTNMPSSVISSQSMHLG 241
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
VL+ ++A++T ++F VFY PR + ++F++ KY++ + + +G RFKMRFE ++ PE
Sbjct: 242 VLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEARSHKLSVGMRFKMRFEGEEVPE 301
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS 413
RR +G + G+ D W +S+WR L V+WDE ++VS WE++ V+ P + Q
Sbjct: 302 RRFSGTIVGVGDNVSSGWADSEWRSLKVQWDEPSSILRPDRVSSWELEPLVATTPSNSQP 361
Query: 414 SPRMKKLRTGLQAPPPD 430
R K+ R + PD
Sbjct: 362 VQRNKRARPSVLPSTPD 378
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 55/95 (57%), Positives = 72/95 (75%)
Query: 674 QSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTD 733
QS RSCTKVH QG VGRA+DL R Y DLL +LE +F++EG L +K W+++YTD
Sbjct: 540 QSRQIRSCTKVHMQGIAVGRAVDLTRFECYEDLLRKLEEMFDIEGELSGFSKKWQVVYTD 599
Query: 734 SENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
E+D+M+VGDDPWHEFC+ V KI IYT EEV++++
Sbjct: 600 DEDDMMMVGDDPWHEFCSMVRKIFIYTSEEVKRLS 634
>gi|269986107|gb|ACX68650.3| auxin response factor [Dimocarpus longan]
Length = 681
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/433 (44%), Positives = 270/433 (62%), Gaps = 26/433 (6%)
Query: 54 SSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFC 112
+ ++Y ELWHACAGPL SLP++G V YFPQGH+EQ+ AS ++P+F+L +I C
Sbjct: 24 TDALYRELWHACAGPLVSLPREGERVYYFPQGHMEQLEASMHQGLEQQMPSFNLPSKILC 83
Query: 113 KVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMF 172
KVV+VQ A E DEVY Q+ LLP+P+ + P K T H F
Sbjct: 84 KVVNVQRRAEPETDEVYAQITLLPEPDPNEVTSPDPPPP-----------EPEKCTVHSF 132
Query: 173 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQP 232
CKTLTASDTSTHGGFSV RR A+DC PPLD QQ P QELVA DLHG EW FRHI+RGQP
Sbjct: 133 CKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNEWHFRHIFRGQP 192
Query: 233 RRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYP 292
RRHLLTTGWS+FVS K LV+GDA +FLRG+ GELR+G+RR ++ + +P S++S + +
Sbjct: 193 RRHLLTTGWSVFVSSKKLVAGDAFIFLRGETGELRVGVRRHMRQQTNMPSSVISSHSMHL 252
Query: 293 NVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSP 352
VL+ ++A++T ++F +FY PR + ++F++ KY++ + + +G RFKMRFE ++ P
Sbjct: 253 GVLATASHAIATGTLFSIFYKPRTSRSEFIVSVNKYLEARKHKLSVGMRFKMRFEGEEVP 312
Query: 353 ERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID----RSVSLPP 408
+ +G++ G+ D WPNS+WR L V+WDE ++VS WE++ + + PP
Sbjct: 313 DEGFSGIIVGVEDNKTSAWPNSEWRSLKVQWDEPSSILRPDRVSSWELEPLVANTTTPPP 372
Query: 409 LSIQSSPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVG----FVSP 464
+ Q + R K+ R PP P A VL +S S+ ++ ++SP
Sbjct: 373 PNSQPAQRNKRAR------PPVLPTPAPDLSVLGMWKSPVESQAFSYSDSQHGRDLYLSP 426
Query: 465 LYGCDTVNHPLGF 477
+ T +PLGF
Sbjct: 427 KFSPATKANPLGF 439
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 97/168 (57%), Gaps = 18/168 (10%)
Query: 601 NVKLNSSSIQMPAIGAEIRKANLLNEHKPVENIPTPTFKANMRSHKDGSFNGTAAGCKLF 660
N++ +S+++ M A + R P P+ A+ H + S N + C
Sbjct: 497 NIEESSAAVTMSATVGDDR--------------PVPSLDADSEQHSEPS-NIPSVSCDAE 541
Query: 661 GFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLL 720
L S SQS RSCTKVH QG VGRA+DL R + Y+DLL LE +F++ G L
Sbjct: 542 KSCLRSPQ---ESQSRQIRSCTKVHMQGIAVGRAVDLTRFDRYDDLLKRLEEMFDIGGEL 598
Query: 721 RDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
K W+++YTD E+D+M+VGDDPWHEFC+ V KI IYT EEV++++
Sbjct: 599 SGATKKWQVVYTDDEDDMMMVGDDPWHEFCSMVRKIFIYTAEEVKRLS 646
>gi|140053546|gb|ABO80473.1| AUX/IAA protein; Transcriptional factor B3; Auxin response factor
[Medicago truncatula]
Length = 670
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 183/377 (48%), Positives = 254/377 (67%), Gaps = 16/377 (4%)
Query: 50 SSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQP 108
+ S + ++Y ELWHACAGPL +LP++G V YFPQGH+EQ+ AS + ++P+F+L
Sbjct: 8 TGSTNDALYKELWHACAGPLVTLPREGERVYYFPQGHMEQLEASMNQGLEQQMPSFNLPS 67
Query: 109 QIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKST 168
+I CKVV++ L A E DEVY Q+ LLP+ + + L + P + T
Sbjct: 68 KILCKVVNIHLRAEPETDEVYAQITLLPETDQSEVTSPDDPLPE-----------PPRCT 116
Query: 169 PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIY 228
H FCKTLTASDTSTHGGFSV RR A+DC PPLD QQ P QELVA DLHG EW FRHI+
Sbjct: 117 VHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELVATDLHGNEWHFRHIF 176
Query: 229 RGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLR----GKDGELRLGIRRSVQPRNGLPDSI 284
RGQPRRHLLTTGWS+FVS K LV+GDA +FLR G++GELR+G+RR ++ ++ +P S+
Sbjct: 177 RGQPRRHLLTTGWSVFVSSKKLVAGDAFIFLRQVVLGENGELRVGVRRLMRQQSNMPSSV 236
Query: 285 LSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKM 344
+S + + VL+ ++A+ST ++F VFY PR + ++F++ KY++ + + +G RFKM
Sbjct: 237 ISSHSMHLGVLATASHAISTGTLFSVFYKPRTSRSEFIVSINKYLEARNHKLSVGMRFKM 296
Query: 345 RFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSV 404
RFE D+ PERR +G + G+ D W +S+WR L V+WDE ++VSPWE++ V
Sbjct: 297 RFEGDEVPERRFSGTIVGVEDNKSSVWADSEWRSLKVQWDEPSSILRPDRVSPWELEPLV 356
Query: 405 SLPPLSIQSSPRMKKLR 421
S PP + Q + R K+ R
Sbjct: 357 STPPANSQPTQRNKRSR 373
Score = 122 bits (306), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 56/96 (58%), Positives = 73/96 (76%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYT 732
SQS RSCTKVH QG VGRA+DL R +GY DLL +LE +F++EG L K W ++YT
Sbjct: 540 SQSRQIRSCTKVHMQGMAVGRAVDLTRFDGYEDLLRKLEEMFDIEGELCGATKKWLVVYT 599
Query: 733 DSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
D+E+D+M+VGDDPW EFC+ V K+ IYT EEV+K++
Sbjct: 600 DNEDDMMMVGDDPWLEFCSVVRKMFIYTPEEVKKLS 635
>gi|125598233|gb|EAZ38013.1| hypothetical protein OsJ_22358 [Oryza sativa Japonica Group]
Length = 904
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/377 (51%), Positives = 258/377 (68%), Gaps = 15/377 (3%)
Query: 36 SSSSSSSCSANSSSSSSLSSS--IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASS 93
SSSS S A ++S ++ + ELWHACAGPL SLP G+ VVYFPQGH EQVA+S
Sbjct: 4 SSSSGSVLPAQAASPEAVEEQKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAAS 63
Query: 94 SAFP-PIEVPNF-DLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLE 151
+ ++PN+ +L PQ+ C++ +V + A+ E DEVY Q+ L P L ++L+
Sbjct: 64 TNKEMESQIPNYPNLPPQLICQLHNVTMHADAETDEVYAQMTLQP--------LSPQELK 115
Query: 152 DLGVDEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQE 211
D + E G S K + FCKTLTASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QE
Sbjct: 116 DPYLPAELG--SANKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQE 173
Query: 212 LVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIR 271
L+AKDLHG EW+FRHI+RGQP+RHLLTTGWS+FVS K LV+GD+VLF+ + +L LGIR
Sbjct: 174 LIAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIR 233
Query: 272 RSVQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKI 331
R+ +P+ +P S+LS + + +L+ A+A ST S F +FY+PRA+ ++FVIP KYVK
Sbjct: 234 RANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIPLSKYVKA 293
Query: 332 IMNP-ICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSD 390
+ + I +G RF+M FE ++S RR G +TGI+DLD RWPNS WR + V WDE +
Sbjct: 294 VYHTRISVGMRFRMLFETEESSVRRYMGTITGISDLDAARWPNSHWRSVKVGWDESTAGE 353
Query: 391 HQEQVSPWEIDRSVSLP 407
Q +VS WEI+ + P
Sbjct: 354 RQPRVSLWEIEPLTTFP 370
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 45/62 (72%), Gaps = 1/62 (1%)
Query: 707 LSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVE 765
+ EL LF +EG L +P + GW++++ D E+DV++VGDDPW EF N VS I I + +EV+
Sbjct: 800 MEELGRLFGLEGQLENPLRSGWQLVFVDREDDVLLVGDDPWQEFVNSVSCIKILSPQEVQ 859
Query: 766 KM 767
+M
Sbjct: 860 QM 861
>gi|158512939|sp|A2YG67.1|ARFQ_ORYSI RecName: Full=Auxin response factor 17
gi|125556472|gb|EAZ02078.1| hypothetical protein OsI_24158 [Oryza sativa Indica Group]
Length = 917
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/377 (51%), Positives = 258/377 (68%), Gaps = 15/377 (3%)
Query: 36 SSSSSSSCSANSSSSSSLSSS--IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASS 93
SSSS S A ++S ++ + ELWHACAGPL SLP G+ VVYFPQGH EQVA+S
Sbjct: 4 SSSSGSVLPAQAASPEAVEEQKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAAS 63
Query: 94 SAFP-PIEVPNF-DLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLE 151
+ ++PN+ +L PQ+ C++ +V + A+ E DEVY Q+ L P L ++L+
Sbjct: 64 TNKEMESQIPNYPNLPPQLICQLHNVTMHADAETDEVYAQMTLQP--------LSPQELK 115
Query: 152 DLGVDEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQE 211
D + E G S K + FCKTLTASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QE
Sbjct: 116 DPYLPAELG--SANKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQE 173
Query: 212 LVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIR 271
L+AKDLHG EW+FRHI+RGQP+RHLLTTGWS+FVS K LV+GD+VLF+ + +L LGIR
Sbjct: 174 LIAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIR 233
Query: 272 RSVQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKI 331
R+ +P+ +P S+LS + + +L+ A+A ST S F +FY+PRA+ ++FVIP KYVK
Sbjct: 234 RANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIPLSKYVKA 293
Query: 332 IMNP-ICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSD 390
+ + I +G RF+M FE ++S RR G +TGI+DLD RWPNS WR + V WDE +
Sbjct: 294 VYHTRISVGMRFRMLFETEESSVRRYMGTITGISDLDAARWPNSHWRSVKVGWDESTAGE 353
Query: 391 HQEQVSPWEIDRSVSLP 407
Q +VS WEI+ + P
Sbjct: 354 RQPRVSLWEIEPLTTFP 370
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 62/86 (72%), Gaps = 2/86 (2%)
Query: 683 KVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMVV 741
KV+K G+ GR++D+ R + Y++L EL LF +EG L +P + GW++++ D E+DV++V
Sbjct: 790 KVYKSGT-YGRSLDITRFSSYHELRRELGRLFGLEGQLENPLRSGWQLVFVDREDDVLLV 848
Query: 742 GDDPWHEFCNEVSKIHIYTQEEVEKM 767
GDDPW EF N VS I I + +EV++M
Sbjct: 849 GDDPWQEFVNSVSCIKILSPQEVQQM 874
>gi|225465265|ref|XP_002268348.1| PREDICTED: auxin response factor 1 [Vitis vinifera]
gi|297739458|emb|CBI29640.3| unnamed protein product [Vitis vinifera]
Length = 678
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 181/370 (48%), Positives = 252/370 (68%), Gaps = 15/370 (4%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPI--EVPNFDLQPQIFCK 113
++Y ELWHACAGPL ++P++G V YFPQGH+EQ+ +S+ + ++P+F+L +I CK
Sbjct: 21 ALYKELWHACAGPLVTVPREGERVYYFPQGHMEQLEASTTHQGLDQQMPSFNLPSKILCK 80
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFC 173
VV VQL A E DEVY QV LLP+P+ + L + P + T H FC
Sbjct: 81 VVHVQLRAEPETDEVYAQVTLLPEPDQSEITSPDPPLPE-----------PQRCTVHSFC 129
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
KTLTASDTSTHGGFSV RR A+DC PPLD QQ P QELVA DLHG EW FRHI+RGQPR
Sbjct: 130 KTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVAADLHGNEWHFRHIFRGQPR 189
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
RHLLTTGWS+FVS K LV+GDA +FLRG++GELR+G+RR ++ + +P S++S + +
Sbjct: 190 RHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQLSNMPSSVISSHSMHLG 249
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
VL+ ++A+ST ++F VFY PR + ++F++ KY++ + + +G RFKMRFE ++ PE
Sbjct: 250 VLATASHAISTGTLFSVFYKPRTSRSEFIVSLNKYLEARNHKLSVGMRFKMRFEGEEVPE 309
Query: 354 RRCNGVVTGITDLDPYR-WPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSV-SLPPLSI 411
RR +G + G+ D + W +S+WR L V+WDE E+VS WE++ V + P ++
Sbjct: 310 RRFSGTIVGVGDKNTSSGWADSEWRSLKVQWDEPASIFRPERVSAWELEPLVAAAAPTNL 369
Query: 412 QSSPRMKKLR 421
Q + R K+ R
Sbjct: 370 QPAQRNKRAR 379
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 95/163 (58%), Gaps = 11/163 (6%)
Query: 614 IGAEIRKANLLNEHKPV----ENIPTPTFKANMRSHKDGS-FNGT---AAGCKLFGFSLT 665
G ++ + L E PV E+ P P+ H + S N + + C+ SL
Sbjct: 483 FGFQLLDNSTLEETLPVLTVGEDQPVPSLDVESDQHSEPSNINRSDIPSVSCEPDKLSLR 542
Query: 666 SETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK 725
S SQS RSCTKVH QG VGRA+DL R + Y DLL +LE +F+++G L
Sbjct: 543 SPQ---ESQSRQIRSCTKVHMQGIAVGRAVDLTRFDRYEDLLKKLEEMFDIQGELCGLTS 599
Query: 726 GWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
W+++YTD E+D+M+VGDDPW EFC+ V KI IYT EEV++++
Sbjct: 600 IWQVVYTDDEDDMMMVGDDPWLEFCSMVRKIFIYTAEEVKRLS 642
>gi|115469522|ref|NP_001058360.1| Os06g0677800 [Oryza sativa Japonica Group]
gi|75253264|sp|Q653U3.1|ARFQ_ORYSJ RecName: Full=Auxin response factor 17
gi|52076626|dbj|BAD45527.1| putative auxin response factor [Oryza sativa Japonica Group]
gi|52076912|dbj|BAD45924.1| putative auxin response factor [Oryza sativa Japonica Group]
gi|113596400|dbj|BAF20274.1| Os06g0677800 [Oryza sativa Japonica Group]
Length = 917
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 194/377 (51%), Positives = 258/377 (68%), Gaps = 15/377 (3%)
Query: 36 SSSSSSSCSANSSSSSSLSSS--IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASS 93
SSSS S A ++S ++ + ELWHACAGPL SLP G+ VVYFPQGH EQVA+S
Sbjct: 4 SSSSGSVLPAQAASPEAVEEQKCLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAAS 63
Query: 94 SAFP-PIEVPNF-DLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLE 151
+ ++PN+ +L PQ+ C++ +V + A+ E DEVY Q+ L P L ++L+
Sbjct: 64 TNKEMESQIPNYPNLPPQLICQLHNVTMHADAETDEVYAQMTLQP--------LSPQELK 115
Query: 152 DLGVDEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQE 211
D + E G S K + FCKTLTASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QE
Sbjct: 116 DPYLPAELG--SANKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQE 173
Query: 212 LVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIR 271
L+AKDLHG EW+FRHI+RGQP+RHLLTTGWS+FVS K LV+GD+VLF+ + +L LGIR
Sbjct: 174 LIAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIR 233
Query: 272 RSVQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKI 331
R+ +P+ +P S+LS + + +L+ A+A ST S F +FY+PRA+ ++FVIP KYVK
Sbjct: 234 RANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIPLSKYVKA 293
Query: 332 IMNP-ICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSD 390
+ + I +G RF+M FE ++S RR G +TGI+DLD RWPNS WR + V WDE +
Sbjct: 294 VYHTRISVGMRFRMLFETEESSVRRYMGTITGISDLDAARWPNSHWRSVKVGWDESTAGE 353
Query: 391 HQEQVSPWEIDRSVSLP 407
Q +VS WEI+ + P
Sbjct: 354 RQPRVSLWEIEPLTTFP 370
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 62/86 (72%), Gaps = 2/86 (2%)
Query: 683 KVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMVV 741
KV+K G+ GR++D+ R + Y++L EL LF +EG L +P + GW++++ D E+DV++V
Sbjct: 790 KVYKSGT-YGRSLDITRFSSYHELRRELGRLFGLEGQLENPLRSGWQLVFVDREDDVLLV 848
Query: 742 GDDPWHEFCNEVSKIHIYTQEEVEKM 767
GDDPW EF N VS I I + +EV++M
Sbjct: 849 GDDPWQEFVNSVSCIKILSPQEVQQM 874
>gi|449443756|ref|XP_004139643.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
Length = 693
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 185/376 (49%), Positives = 249/376 (66%), Gaps = 17/376 (4%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNFDLQPQIFCKVV 115
+Y ELW ACAGPL +P G V YFPQGH+EQ+ S+ ++P+FDL P+I C+VV
Sbjct: 20 LYEELWKACAGPLVEVPVDGERVFYFPQGHMEQLEESTNQELNHQIPHFDLPPKILCRVV 79
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKT 175
+++LLA KE DEVY Q+ L P EA Q E D E R T+ T H FCK
Sbjct: 80 NIRLLAEKETDEVYAQITLYP---------EADQSEPQSADPEPPER--TRQTVHSFCKI 128
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
LTASDTSTHGGFSV R+ A +C PPLD Q P+QEL AKDLHG EW+F+HI+RGQPRRH
Sbjct: 129 LTASDTSTHGGFSVLRKHATECLPPLDMSQSTPTQELAAKDLHGYEWKFKHIFRGQPRRH 188
Query: 236 LLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVL 295
LLTTGWS FV+ K LV+GDA +FLRG +GELR+G+RR + ++ +P S++S + + VL
Sbjct: 189 LLTTGWSTFVTSKRLVAGDAFVFLRGDNGELRVGVRRQARQQSLMPSSVISSHSMHLGVL 248
Query: 296 SVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERR 355
+ ++AV T++ F V+Y PR + F+I KY++ + N +G RFKMRFE ++SPERR
Sbjct: 249 ATASHAVRTQTYFVVYYKPRTSQ--FIISLNKYLETVKNGYEVGMRFKMRFEGEESPERR 306
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSP 415
G + G+ D+ P +W +SKWR L ++WDE E+VSPWEI+ V L+ + P
Sbjct: 307 FTGTIVGVGDMSP-QWSDSKWRSLKIQWDEPATIQRPERVSPWEIEPFVPSASLNF-THP 364
Query: 416 RMKKLRTG-LQAPPPD 430
+K R ++ PPP+
Sbjct: 365 AIKSKRARPVEIPPPE 380
Score = 105 bits (263), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 70/105 (66%), Gaps = 1/105 (0%)
Query: 664 LTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDP 723
LT T T + R+ TKV QG VGRA+DL L GY DL+ ELE++F ++G LR
Sbjct: 568 LTKGTQTKHISNLSSRTRTKVQMQGVAVGRAVDLTTLEGYEDLIDELENVFEIKGELRGI 627
Query: 724 AKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
K W I++TD END+M+VGDDPW EFC V +I I + EEV+KM+
Sbjct: 628 NK-WSIVFTDDENDMMLVGDDPWPEFCKMVKRIFICSSEEVKKMS 671
>gi|218190977|gb|EEC73404.1| hypothetical protein OsI_07659 [Oryza sativa Indica Group]
Length = 678
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 180/360 (50%), Positives = 246/360 (68%), Gaps = 18/360 (5%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKV 114
++Y ELWHACAGPL ++P++G +V YFPQGH+EQ+ AS+ +P F+L +I CKV
Sbjct: 22 ALYRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLFNLPSKILCKV 81
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
V+V+L A ++DEVY Q+ L QPE + L + + E P K H FCK
Sbjct: 82 VNVELRAETDSDEVYAQIML--QPEADQNELTSPKPEP---------HEPEKCNVHSFCK 130
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLTASDTSTHGGFSV RR AE+C PPLD Q P QELVA+DLHG EW FRHI+RGQPRR
Sbjct: 131 TLTASDTSTHGGFSVLRRHAEECLPPLDMTQNPPWQELVARDLHGNEWHFRHIFRGQPRR 190
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS+FVS K LV+GDA +FLRG++GELR+G+RR ++ N +P S++S + + V
Sbjct: 191 HLLTTGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGV 250
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
L+ ++A+ST ++F VFY PR + ++FV+ KY++ + I +G RFKMRFE D++PER
Sbjct: 251 LATASHAISTGTLFSVFYKPRTSQSEFVVSANKYLEAKNSKISVGMRFKMRFEGDEAPER 310
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSS 414
R +G + G+ + W NS WR L V+WDE ++VSPWE++ PL++ +S
Sbjct: 311 RFSGTIIGVGSMSTSPWANSDWRSLKVQWDEPSVVPRPDRVSPWELE------PLAVSNS 364
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 77/105 (73%), Gaps = 1/105 (0%)
Query: 665 TSETPTP-SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDP 723
S P+P +QS RSCTKV QG VGRA+DL RL+GY+DL +LE +F+++G L
Sbjct: 533 ASSEPSPHETQSRQVRSCTKVIMQGMAVGRAVDLTRLHGYDDLRCKLEEMFDIQGELSAS 592
Query: 724 AKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
K W+++YTD E+D+M+VGDDPW EFC+ V +I+IYT EE +++T
Sbjct: 593 LKKWKVVYTDDEDDMMLVGDDPWPEFCSMVKRIYIYTYEEAKQLT 637
>gi|115446715|ref|NP_001047137.1| Os02g0557200 [Oryza sativa Japonica Group]
gi|75225108|sp|Q6YVY0.1|ARFG_ORYSJ RecName: Full=Auxin response factor 7
gi|46390905|dbj|BAD16420.1| putative auxin-responsive factor (ARF1) [Oryza sativa Japonica
Group]
gi|113536668|dbj|BAF09051.1| Os02g0557200 [Oryza sativa Japonica Group]
gi|222623062|gb|EEE57194.1| hypothetical protein OsJ_07141 [Oryza sativa Japonica Group]
Length = 678
Score = 370 bits (949), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 180/360 (50%), Positives = 246/360 (68%), Gaps = 18/360 (5%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKV 114
++Y ELWHACAGPL ++P++G +V YFPQGH+EQ+ AS+ +P F+L +I CKV
Sbjct: 22 ALYRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLFNLPSKILCKV 81
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
V+V+L A ++DEVY Q+ L QPE + L + + E P K H FCK
Sbjct: 82 VNVELRAETDSDEVYAQIML--QPEADQNELTSPKPEP---------HEPEKCNVHSFCK 130
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLTASDTSTHGGFSV RR AE+C PPLD Q P QELVA+DLHG EW FRHI+RGQPRR
Sbjct: 131 TLTASDTSTHGGFSVLRRHAEECLPPLDMTQNPPWQELVARDLHGNEWHFRHIFRGQPRR 190
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS+FVS K LV+GDA +FLRG++GELR+G+RR ++ N +P S++S + + V
Sbjct: 191 HLLTTGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHLGV 250
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
L+ ++A+ST ++F VFY PR + ++FV+ KY++ + I +G RFKMRFE D++PER
Sbjct: 251 LATASHAISTGTLFSVFYKPRTSQSEFVVSANKYLEAKNSKISVGMRFKMRFEGDEAPER 310
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSS 414
R +G + G+ + W NS WR L V+WDE ++VSPWE++ PL++ +S
Sbjct: 311 RFSGTIIGVGSMSTSPWANSDWRSLKVQWDEPSVVPRPDRVSPWELE------PLAVSNS 364
Score = 119 bits (298), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 77/105 (73%), Gaps = 1/105 (0%)
Query: 665 TSETPTP-SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDP 723
S P+P +QS RSCTKV QG VGRA+DL RL+GY+DL +LE +F+++G L
Sbjct: 533 ASSEPSPHETQSRQVRSCTKVIMQGMAVGRAVDLTRLHGYDDLRCKLEEMFDIQGELSAS 592
Query: 724 AKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
K W+++YTD E+D+M+VGDDPW EFC+ V +I+IYT EE +++T
Sbjct: 593 LKKWKVVYTDDEDDMMLVGDDPWPEFCSMVKRIYIYTYEEAKQLT 637
>gi|413920955|gb|AFW60887.1| auxin response factor [Zea mays]
Length = 849
Score = 369 bits (948), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 185/378 (48%), Positives = 253/378 (66%), Gaps = 14/378 (3%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKVV 115
+Y ELW+ CAGPL ++P+ G+ V YFPQGH+EQV AS++ + +DL +I C+V+
Sbjct: 39 MYTELWNLCAGPLVTVPRVGDKVYYFPQGHIEQVEASTNQVAEQHMQFYDLPWKILCEVM 98
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPT---KSTPHMF 172
+V+L A +NDEVY Q+ LLP+ + E+ G EE P + H F
Sbjct: 99 NVELKAEPDNDEVYAQLTLLPE----------SKPEENGSSEEMPASPPAALARPRVHSF 148
Query: 173 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQP 232
CKTLTASDTSTHGGFSV RR A++C PPLD +Q P+QELVAKDLHGVEWRFRHI+RGQP
Sbjct: 149 CKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFRGQP 208
Query: 233 RRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYP 292
RRHLL +GWS+FVS K LV+GDA +FLRG GELR+G+RR+++ + +P S++S + +
Sbjct: 209 RRHLLQSGWSVFVSAKRLVAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHSMHL 268
Query: 293 NVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSP 352
VL+ +AV+T +MF V+Y PR + A+FV+P +Y++ + IG RFKMRFE +++P
Sbjct: 269 GVLATAWHAVNTGTMFTVYYKPRTSPAEFVVPCDRYMESLKRNYPIGMRFKMRFEGEEAP 328
Query: 353 ERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQ 412
E+R G + G D D W SKWR L VRWDE E+VSPW+I+ +VS PP++
Sbjct: 329 EQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPPPINPL 388
Query: 413 SSPRMKKLRTGLQAPPPD 430
R K+ R+ A P+
Sbjct: 389 PVHRPKRPRSNAVASLPE 406
Score = 120 bits (302), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 73/99 (73%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYT 732
SQ RSC KVHKQG +GR++DL + NGY +L++EL+ +F+ G L+ +K W ++YT
Sbjct: 710 SQGGSTRSCKKVHKQGMALGRSVDLTKFNGYTELVAELDEMFDFNGELKGCSKEWMVVYT 769
Query: 733 DSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGT 771
D E D+M+VGDDPW+EFC+ V KI +YT+EEV++M G
Sbjct: 770 DYEGDMMLVGDDPWNEFCSMVHKIFVYTREEVQRMNPGA 808
>gi|413920952|gb|AFW60884.1| auxin response factor [Zea mays]
Length = 817
Score = 369 bits (948), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 187/392 (47%), Positives = 256/392 (65%), Gaps = 14/392 (3%)
Query: 43 CSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEV 101
CS + +Y ELW+ CAGPL ++P+ G+ V YFPQGH+EQV AS++ +
Sbjct: 58 CSLLLAGGGGTEDGMYTELWNLCAGPLVTVPRVGDKVYYFPQGHIEQVEASTNQVAEQHM 117
Query: 102 PNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGG 161
+DL +I C+V++V+L A +NDEVY Q+ LLP+ + E+ G EE
Sbjct: 118 QFYDLPWKILCEVMNVELKAEPDNDEVYAQLTLLPE----------SKPEENGSSEEMPA 167
Query: 162 RSPT---KSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLH 218
P + H FCKTLTASDTSTHGGFSV RR A++C PPLD +Q P+QELVAKDLH
Sbjct: 168 SPPAALARPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLH 227
Query: 219 GVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRN 278
GVEWRFRHI+RGQPRRHLL +GWS+FVS K LV+GDA +FLRG GELR+G+RR+++ +
Sbjct: 228 GVEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGDSGELRVGVRRAMRQQA 287
Query: 279 GLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICI 338
+P S++S + + VL+ +AV+T +MF V+Y PR + A+FV+P +Y++ + I
Sbjct: 288 NVPSSVISSHSMHLGVLATAWHAVNTGTMFTVYYKPRTSPAEFVVPCDRYMESLKRNYPI 347
Query: 339 GTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPW 398
G RFKMRFE +++PE+R G + G D D W SKWR L VRWDE E+VSPW
Sbjct: 348 GMRFKMRFEGEEAPEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPW 407
Query: 399 EIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPD 430
+I+ +VS PP++ R K+ R+ A P+
Sbjct: 408 QIEPAVSPPPINPLPVHRPKRPRSNAVASLPE 439
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 54/74 (72%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYT 732
SQ RSC KVHKQG +GR++DL + NGY +L++EL+ +F+ G L+ +K W ++YT
Sbjct: 743 SQGGSTRSCKKVHKQGMALGRSVDLTKFNGYTELVAELDEMFDFNGELKGCSKEWMVVYT 802
Query: 733 DSENDVMVVGDDPW 746
D E D+M+VGDDPW
Sbjct: 803 DYEGDMMLVGDDPW 816
>gi|359493580|ref|XP_003634630.1| PREDICTED: auxin response factor 1-like isoform 2 [Vitis vinifera]
Length = 640
Score = 369 bits (948), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 187/390 (47%), Positives = 259/390 (66%), Gaps = 17/390 (4%)
Query: 43 CSANSSSSS---SLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPP 98
S NSS SS +++ ++Y ELWHACAGPL ++P++ V YFPQGH+EQ+ AS
Sbjct: 2 VSLNSSYSSLVGTVNDALYKELWHACAGPLVNVPREQERVYYFPQGHMEQLEASMHQGLD 61
Query: 99 IEVPNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEE 158
++P+F+L +I CKVV+V L A E DEVY QV LLP+P+ + L +
Sbjct: 62 QKMPSFNLPSKILCKVVNVHLRAEPETDEVYAQVTLLPEPDQSEITSPDPPLPE------ 115
Query: 159 GGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLH 218
P T H FCKTLTASDTSTHGGFSV RR A++C PPLD Q P QELVAKDLH
Sbjct: 116 -----PQSCTVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQNPPWQELVAKDLH 170
Query: 219 GVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRN 278
G EW FRHI+RGQPRRHLLTTGWS+FVS K L +GDA +FLRG++GELR+G+RR ++ N
Sbjct: 171 GNEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLAAGDAFIFLRGENGELRVGVRRLMRQLN 230
Query: 279 GLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICI 338
+P S++S + + VL+ ++A++T ++F VFY P + ++F++ KY++ + + +
Sbjct: 231 NVPPSVISSHSMHLGVLATASHAITTGTLFSVFYKP--SPSEFIVSVNKYLEARNHKVSV 288
Query: 339 GTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPW 398
G RFKMRFE D++PERR +G + G+ D W +S+WR L V+WDE E+VSPW
Sbjct: 289 GMRFKMRFEGDEAPERRFSGTIVGVGDTGSSGWTDSEWRSLKVQWDEPSSILRPERVSPW 348
Query: 399 EIDRSVSLPPLSIQSSPRMKKLRTGLQAPP 428
E++ V+ PL+ Q R K+ R+ + + P
Sbjct: 349 ELEPLVTETPLTAQPMQRSKRPRSPVLSSP 378
Score = 122 bits (307), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 74/95 (77%)
Query: 674 QSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTD 733
QS RSCTKVH QG VGRA+DL + + Y +LLS+LE +F+++G L P K W+++YTD
Sbjct: 511 QSRQIRSCTKVHMQGMAVGRAVDLTQFSSYKELLSKLEEMFDIKGELCGPTKKWQVVYTD 570
Query: 734 SENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
E+D+M+VGDDPWHEFC+ V KI IYT EEV++++
Sbjct: 571 DEDDMMMVGDDPWHEFCSMVRKIFIYTVEEVKELS 605
>gi|224057828|ref|XP_002299344.1| predicted protein [Populus trichocarpa]
gi|222846602|gb|EEE84149.1| predicted protein [Populus trichocarpa]
Length = 376
Score = 369 bits (948), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 184/353 (52%), Positives = 246/353 (69%), Gaps = 14/353 (3%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSS--AFPPIEVPNFDLQPQIFCK 113
++Y ELWHACAGPL ++P++G +V YFPQGH+EQV +S+ ++P ++L P+I C+
Sbjct: 3 ALYKELWHACAGPLVTVPRQGELVYYFPQGHIEQVEASTNQVADDQQMPAYNLPPKILCR 62
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFC 173
VV+VQL A + DEV+ QV LLP A+Q DL V++E P + H FC
Sbjct: 63 VVNVQLKAELDTDEVFAQVILLPV---------AEQDVDL-VEKEDLPPPPARPRVHSFC 112
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
K LTASDTSTHGGFSV RR A++C PPLD Q P+QELVAKDLHG EWRFRHI+RGQPR
Sbjct: 113 KMLTASDTSTHGGFSVLRRHADECLPPLDMSLQPPAQELVAKDLHGNEWRFRHIFRGQPR 172
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSV-QPRNGLPDSILSKQNSYP 292
RHLL +GWS+FVS K LV+GDA +FLRG+ ELR+G+RR++ QP N + S
Sbjct: 173 RHLLQSGWSLFVSAKKLVAGDAFIFLRGETEELRVGVRRALSQPSNVPSSVMSSHSMHI- 231
Query: 293 NVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSP 352
+L+ V +AVST SMF V+Y PR + A+F+IP KY + + IG RFKM+FE +++P
Sbjct: 232 GILATVWHAVSTGSMFTVYYKPRTSPAEFIIPIDKYRESVKINYAIGMRFKMKFEAEEAP 291
Query: 353 ERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS 405
E+R +G V G+ + DP +WP SKWRCL VRWDE ++VSPW+I+R+++
Sbjct: 292 EQRFSGTVIGVEEADPKKWPRSKWRCLKVRWDETSPVHRPDRVSPWKIERALA 344
>gi|449462367|ref|XP_004148912.1| PREDICTED: auxin response factor 8-like [Cucumis sativus]
Length = 836
Score = 369 bits (947), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 184/351 (52%), Positives = 246/351 (70%), Gaps = 13/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G VVYFPQGH EQVA+++ +PN+ +L PQ+ C++ +V
Sbjct: 24 ELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNKEVDGHIPNYPNLPPQLICQLHNV 83
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L A++ +D + E G P++ + FCKTLT
Sbjct: 84 TMHADVETDEVYAQMTLQP--------LTAQEQKDTFLPMELG--IPSRQPTNYFCKTLT 133
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+AKDLH +EW+FRHI+RGQP+RHLL
Sbjct: 134 ASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIAKDLHDIEWKFRHIFRGQPKRHLL 193
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+VLF+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 194 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAA 253
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F VFY+PRA+ ++FVIP KYVK + + + +G RF+M FE ++S RR
Sbjct: 254 AAHAAATNSCFTVFYNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 313
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI+DLDP RWPNS WR + V WDE + Q +VS WEI+ + P
Sbjct: 314 MGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 364
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEG-LLRDPAK-GWRILYTDSEN 736
R+ KV+K GS VGR++D+ R + Y +L EL +F +EG L+ DP + GW++++ D EN
Sbjct: 710 RTFVKVYKTGS-VGRSLDISRFSSYQELREELAQMFGIEGQLVEDPRRSGWQLVFVDREN 768
Query: 737 DVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
DV+++GDDPW F N V I I + E+ +K+
Sbjct: 769 DVLLLGDDPWEAFVNNVGFIKILSPEDFQKL 799
>gi|242060620|ref|XP_002451599.1| hypothetical protein SORBIDRAFT_04g004430 [Sorghum bicolor]
gi|241931430|gb|EES04575.1| hypothetical protein SORBIDRAFT_04g004430 [Sorghum bicolor]
Length = 911
Score = 369 bits (947), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 187/351 (53%), Positives = 244/351 (69%), Gaps = 13/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA+S+ ++PN+ L PQ+ C++ +V
Sbjct: 30 ELWHACAGPLVSLPAVGSRVVYFPQGHGEQVAASTNKEMEAQIPNYPSLPPQLICQLHNV 89
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L ++L+D + E G S K + FCKTLT
Sbjct: 90 TMHADAETDEVYAQMTLQP--------LSPQELKDPFLPAELGTAS--KQPTNYFCKTLT 139
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+A DLHG EW+FRHI+RGQP+RHLL
Sbjct: 140 ASDTSTHGGFSVPRRAAEKVFPPLDFNQQPPAQELIATDLHGNEWKFRHIFRGQPKRHLL 199
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+VLF+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 200 TTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAA 259
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A ST S F +FY+PRA+ +FVIP KYVK + + I +G RF+M FE ++S RR
Sbjct: 260 AAHAASTNSRFTIFYNPRASPCEFVIPMAKYVKAVYHTRISVGMRFRMLFETEESSVRRY 319
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI+DLDP RWPNS WR + V WDE + Q +VS WEI+ + P
Sbjct: 320 MGTITGISDLDPVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPLTTFP 370
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 63/87 (72%), Gaps = 2/87 (2%)
Query: 682 TKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMV 740
KV+K G+ VGR +D+ R + Y++L SE+ LF +EG L DP + GW++++ D E+DV++
Sbjct: 782 VKVYKSGN-VGRLLDITRFSSYDELRSEVGRLFGLEGQLEDPLRSGWQLVFVDREDDVLL 840
Query: 741 VGDDPWHEFCNEVSKIHIYTQEEVEKM 767
VGDDPW EF N VS I I + EEV++M
Sbjct: 841 VGDDPWQEFVNSVSCIKILSPEEVQQM 867
>gi|115444427|ref|NP_001045993.1| Os02g0164900 [Oryza sativa Japonica Group]
gi|75259114|sp|Q6H6V4.1|ARFF_ORYSJ RecName: Full=Auxin response factor 6; AltName: Full=OsARF6a
gi|158512870|sp|A2X1A1.1|ARFF_ORYSI RecName: Full=Auxin response factor 6; AltName: Full=OsARF6a
gi|49388055|dbj|BAD25169.1| putative auxin response transcription factor(ARF6) [Oryza sativa
Japonica Group]
gi|49388412|dbj|BAD25545.1| putative auxin response transcription factor(ARF6) [Oryza sativa
Japonica Group]
gi|113535524|dbj|BAF07907.1| Os02g0164900 [Oryza sativa Japonica Group]
gi|125538216|gb|EAY84611.1| hypothetical protein OsI_05979 [Oryza sativa Indica Group]
gi|125580929|gb|EAZ21860.1| hypothetical protein OsJ_05506 [Oryza sativa Japonica Group]
gi|215697842|dbj|BAG92035.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 908
Score = 369 bits (947), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 204/411 (49%), Positives = 267/411 (64%), Gaps = 23/411 (5%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA+S+ ++PN+ +L PQ+ C++ +V
Sbjct: 30 ELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQLICQLHNV 89
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L ++L+D + E G S K + FCKTLT
Sbjct: 90 TMHADAETDEVYAQMTLQP--------LSPQELKDPFLPAELGTAS--KQPTNYFCKTLT 139
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+AKDLHG EW+FRHI+RGQP+RHLL
Sbjct: 140 ASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELMAKDLHGNEWKFRHIFRGQPKRHLL 199
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+VLF+ +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 200 TTGWSVFVSAKRLVAGDSVLFIWNDSNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAA 259
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A ST S F +FY+PRA+ ++FVIP KYVK + + I +G RF+M FE ++S RR
Sbjct: 260 AAHAASTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRY 319
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPR 416
G +TGI+DLDP RW NS WR + V WDE + Q +VS WEI+ + P P
Sbjct: 320 MGTITGISDLDPVRWMNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-----MYPS 374
Query: 417 MKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYG 467
LR L+ P P S GG D S+ L+ +N GF S +G
Sbjct: 375 PFPLR--LKRPWPTGLPSLYGGKEDDLASSL---MWLRDSQNTGFQSLNFG 420
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 63/86 (73%), Gaps = 2/86 (2%)
Query: 683 KVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMVV 741
KV+K G+ VGR +D+ R + Y++L SE+ LF +EG L DP + GW++++ D E+DV++V
Sbjct: 781 KVYKSGT-VGRLLDITRFSSYHELRSEVGRLFGLEGQLEDPLRSGWQLVFVDREDDVLLV 839
Query: 742 GDDPWHEFCNEVSKIHIYTQEEVEKM 767
GDDPW EF N VS I I + +EV++M
Sbjct: 840 GDDPWQEFVNSVSCIKILSPQEVQQM 865
>gi|242073172|ref|XP_002446522.1| hypothetical protein SORBIDRAFT_06g017490 [Sorghum bicolor]
gi|241937705|gb|EES10850.1| hypothetical protein SORBIDRAFT_06g017490 [Sorghum bicolor]
Length = 661
Score = 369 bits (946), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 180/362 (49%), Positives = 243/362 (67%), Gaps = 15/362 (4%)
Query: 44 SANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVP 102
+A + S S ++Y ELWHACAGPL ++P++G V YFPQGH+EQ+ AS+ +P
Sbjct: 11 AAAAGSGGMPSDALYRELWHACAGPLVTVPRQGERVYYFPQGHMEQLEASTHQQLDQYLP 70
Query: 103 NFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGR 162
F+L P+I C VV+V+L A ++DEVY Q+ L P EA Q E +D E +
Sbjct: 71 MFNLPPKILCSVVNVELRAEADSDEVYAQIMLQP---------EADQNELTSLDPEP--Q 119
Query: 163 SPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEW 222
P K T H FCKTLTASDTSTHGGFSV RR AE+C P LD P QELVAKDLHG EW
Sbjct: 120 EPEKCTAHSFCKTLTASDTSTHGGFSVLRRHAEECLPQLDMSLNPPCQELVAKDLHGTEW 179
Query: 223 RFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPD 282
FRHI+RGQP+RHLLTTGWS+FVS K LV+GDA +F+RG++GELR+G+RR ++ N +P
Sbjct: 180 HFRHIFRGQPKRHLLTTGWSVFVSSKRLVAGDAFIFMRGENGELRVGVRRLMRQVNSMPS 239
Query: 283 SILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRF 342
S++S + + VL+ ++A+ST ++F VFY PR + +DF++ KY++ I +G RF
Sbjct: 240 SVISSHSMHLGVLATASHAISTGTLFSVFYKPRTSRSDFIVSVNKYLEAKKQKISVGMRF 299
Query: 343 KMRFEMDDSPERRCNGVVTGITDLDPYR---WPNSKWRCLMVRWDECIGSDHQEQVSPWE 399
KMRFE D++PERR +G + GI L W +S WR L V+WDE +++SPWE
Sbjct: 300 KMRFEGDEAPERRFSGTIIGIGSLPAMSKSLWADSDWRSLKVQWDEPSSILRPDRISPWE 359
Query: 400 ID 401
++
Sbjct: 360 VE 361
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 55/104 (52%), Positives = 74/104 (71%)
Query: 665 TSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPA 724
+SE SQS RSCTKV QG VGRA+DL +L+GY+DL +LE +F++ G L
Sbjct: 536 SSERSPLESQSRQVRSCTKVIMQGMAVGRAVDLTKLSGYSDLCQKLEEMFDIHGELGCTL 595
Query: 725 KGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
K WR+++TD E+D+M+VGDDPW EFC V +I+IYT EE +K+T
Sbjct: 596 KKWRVIFTDDEDDMMLVGDDPWDEFCRMVKRIYIYTYEEAKKLT 639
>gi|413920954|gb|AFW60886.1| auxin response factor [Zea mays]
Length = 751
Score = 369 bits (946), Expect = 5e-99, Method: Compositional matrix adjust.
Identities = 192/410 (46%), Positives = 263/410 (64%), Gaps = 16/410 (3%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKVV 115
+Y ELW+ CAGPL ++P+ G+ V YFPQGH+EQV AS++ + +DL +I C+V+
Sbjct: 39 MYTELWNLCAGPLVTVPRVGDKVYYFPQGHIEQVEASTNQVAEQHMQFYDLPWKILCEVM 98
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPT---KSTPHMF 172
+V+L A +NDEVY Q+ LLP+ + E+ G EE P + H F
Sbjct: 99 NVELKAEPDNDEVYAQLTLLPE----------SKPEENGSSEEMPASPPAALARPRVHSF 148
Query: 173 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQP 232
CKTLTASDTSTHGGFSV RR A++C PPLD +Q P+QELVAKDLHGVEWRFRHI+RGQP
Sbjct: 149 CKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGVEWRFRHIFRGQP 208
Query: 233 RRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYP 292
RRHLL +GWS+FVS K LV+GDA +FLRG GELR+G+RR+++ + +P S++S + +
Sbjct: 209 RRHLLQSGWSVFVSAKRLVAGDAFIFLRGDSGELRVGVRRAMRQQANVPSSVISSHSMHL 268
Query: 293 NVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSP 352
VL+ +AV+T +MF V+Y PR + A+FV+P +Y++ + IG RFKMRFE +++P
Sbjct: 269 GVLATAWHAVNTGTMFTVYYKPRTSPAEFVVPCDRYMESLKRNYPIGMRFKMRFEGEEAP 328
Query: 353 ERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQ 412
E+R G + G D D W SKWR L VRWDE E+VSPW+I+ +VS PP++
Sbjct: 329 EQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQIEPAVSPPPINPL 388
Query: 413 SSPRMKKLRTGLQAPPPD--YPVSARGGGVLDFEESVRSSKVLQGQENVG 460
R K+ R+ A P+ P V + + LQ Q+NV
Sbjct: 389 PVHRPKRPRSNAVASLPESSAPTKEAAPKVTLETQQHALQRPLQTQDNVA 438
>gi|357149540|ref|XP_003575147.1| PREDICTED: auxin response factor 7-like [Brachypodium distachyon]
Length = 672
Score = 368 bits (945), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 186/380 (48%), Positives = 248/380 (65%), Gaps = 15/380 (3%)
Query: 46 NSSSSSSLSSS---IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEV 101
NS + +L SS +Y ELWHACAGPL ++P++G V YFPQGH+EQ+ AS+ +
Sbjct: 3 NSGVAGALGSSSDALYRELWHACAGPLVTVPRQGERVYYFPQGHMEQLEASTDQQLDQHL 62
Query: 102 PNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGG 161
P F+L +I CKVV+V+L A ++DEVY Q+ L P E Q E D E
Sbjct: 63 PLFNLPSKILCKVVNVELRAETDSDEVYAQIMLQP---------ETDQSEPSSADPE--P 111
Query: 162 RSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVE 221
P K H FCKTLTASDTSTHGGFSV RR AE+C PPLD Q P QELVAKDLH E
Sbjct: 112 HEPEKCNAHSFCKTLTASDTSTHGGFSVLRRHAEECLPPLDMTQNPPWQELVAKDLHANE 171
Query: 222 WRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLP 281
W FRHI+RGQPRRHLLTTGWS+FVS K LV+GDA +FLRG +G+LR+G+RR ++ N +P
Sbjct: 172 WHFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGDNGDLRVGVRRLMRQLNNMP 231
Query: 282 DSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTR 341
S++S + + VL+ ++A+ST ++F VFY PR + ++FV+ KY++ N + +G R
Sbjct: 232 SSVISSHSMHLGVLATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKNNKMSVGMR 291
Query: 342 FKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
FKMRFE D++PERR +G + G+ + W +S WR L V+WDE ++VSPWE++
Sbjct: 292 FKMRFEGDEAPERRFSGTIIGVGSMTTSPWADSDWRSLKVQWDEPSAIPRPDRVSPWELE 351
Query: 402 RSVSLPPLSIQSSPRMKKLR 421
V+ Q R K+ R
Sbjct: 352 PLVATSIQPPQPPARNKRAR 371
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 71/96 (73%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYT 732
+QS RSCTKV +G VGRA+DL RL+GY DL +LE +F+++G L K W+++YT
Sbjct: 535 TQSRQVRSCTKVIMEGMAVGRAVDLTRLHGYEDLHQKLEEMFDIQGELSASLKKWKLVYT 594
Query: 733 DSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
D E+D+M+VGDDPW EFC+ V K++IY+ EE + +T
Sbjct: 595 DDEDDMMLVGDDPWSEFCSMVKKVYIYSYEEAKHLT 630
>gi|302818562|ref|XP_002990954.1| hypothetical protein SELMODRAFT_451392 [Selaginella moellendorffii]
gi|300141285|gb|EFJ07998.1| hypothetical protein SELMODRAFT_451392 [Selaginella moellendorffii]
Length = 824
Score = 368 bits (945), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 189/372 (50%), Positives = 247/372 (66%), Gaps = 16/372 (4%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPP-IEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G VVYFPQGH EQVA+S+ ++P++ +L P + C++ ++
Sbjct: 27 ELWHACAGPLVSLPSVGTRVVYFPQGHSEQVAASTQKEADADIPSYPNLPPHLVCQLHNI 86
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
L A+ E DEVY Q+ L P + ++ + DLG R P++ FCKTLT
Sbjct: 87 TLHADTETDEVYAQMTLQP---MNAQEKDSFMVSDLGRQ----NRQPSE----YFCKTLT 135
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFS+PRRAAE FPPLD+ QQ P+QE+VA+DLH EWRFRHIYRGQPRRHLL
Sbjct: 136 ASDTSTHGGFSIPRRAAEKVFPPLDFSQQPPAQEIVARDLHDTEWRFRHIYRGQPRRHLL 195
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K L +GDAVLF+R + G+L LGIRR+ + + +P S+LS + Y +L+
Sbjct: 196 TTGWSVFVSAKRLQTGDAVLFIRDEKGQLLLGIRRANRQQASMPLSLLSTDSMYIGILAA 255
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICI--GTRFKMRFEMDDSPERR 355
A+A ST S F +FY+PRA+ ++FVIP KY + N + + G RF+M+FE ++S RR
Sbjct: 256 AAHANSTSSRFTIFYNPRASPSEFVIPLSKYYNAVYNNMQVSPGMRFRMQFETEESGIRR 315
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSP 415
G + G DLDP RWPNS WR L V WDE + Q+++S WEI+ S P L S
Sbjct: 316 HTGTIVGSGDLDPVRWPNSHWRSLKVEWDEPAAGEKQQRISLWEIE-PASTPYLVCSPSF 374
Query: 416 RMKKLRTGLQAP 427
+ R QAP
Sbjct: 375 TFRSKRPWSQAP 386
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 64/90 (71%), Gaps = 2/90 (2%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSEND 737
R+ TKV+K GS VGR++DL RLN Y+ L SEL +F +EG L DP + GW++++ D+END
Sbjct: 706 RTFTKVYKTGS-VGRSLDLTRLNCYDGLRSELARMFGLEGQLEDPHRSGWQLVFVDNEND 764
Query: 738 VMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
V++VGDDPW EF + V I I + E+ M
Sbjct: 765 VLLVGDDPWEEFVSCVRCIKIMSPSELSHM 794
>gi|295844302|gb|ADG43148.1| auxin response factor 14 [Zea mays]
Length = 672
Score = 368 bits (945), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 185/376 (49%), Positives = 248/376 (65%), Gaps = 15/376 (3%)
Query: 50 SSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQP 108
S S +++ ELWHACAGPL ++P++G +V YFPQGH+EQ+ AS+ +P FDL P
Sbjct: 10 SGSAGDALFRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLFDLPP 69
Query: 109 QIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKST 168
+I CKVV+V+L A ++DEVY Q+ L P EA Q E D E P +
Sbjct: 70 KILCKVVNVELRAETDSDEVYAQIMLQP---------EADQSEPTSPDSEPP--EPERCN 118
Query: 169 PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIY 228
+ FCKTLTASDTSTHGGFSV RR AE+C P LD Q P QEL+AKDLHG EW FRHI+
Sbjct: 119 VYSFCKTLTASDTSTHGGFSVLRRHAEECLPQLDMTQNPPWQELLAKDLHGNEWHFRHIF 178
Query: 229 RGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQ 288
RGQPRRHLLTTGWS+FVS K LV+GDA +FLRG++GELR+G+RR ++ N +P S++S
Sbjct: 179 RGQPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSH 238
Query: 289 NSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEM 348
N + VL+ ++A+ST ++F VFY PR + ++FV+ KY++ + + +G RFKMRFE
Sbjct: 239 NMHLGVLATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKNHKVSVGMRFKMRFEG 298
Query: 349 DDSPERRCNGVVTGITDLDPYR---WPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS 405
D+SPERR +G + G+ + W NS WR L V+WDE ++VSPWE++ +
Sbjct: 299 DESPERRLSGTIIGLGSMPANSTSPWANSDWRSLRVQWDEPSAILRPDRVSPWELEPLDA 358
Query: 406 LPPLSIQSSPRMKKLR 421
P Q R K+ R
Sbjct: 359 TNPQPPQPHLRNKRAR 374
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 72/104 (69%)
Query: 665 TSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPA 724
+SE S+S RSCTKV QG VGRA+DL RL+GY DL +LE +F+++G L
Sbjct: 528 SSERSLNESESRQVRSCTKVIMQGMAVGRAVDLTRLDGYADLHRKLEEMFDIQGELSANL 587
Query: 725 KGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
K W+++YTD E+D M+VGDDPW+EF V +I+IY+ EE + +T
Sbjct: 588 KKWKVIYTDDEDDTMLVGDDPWNEFLRMVKRIYIYSYEEAKSLT 631
>gi|242096722|ref|XP_002438851.1| hypothetical protein SORBIDRAFT_10g027220 [Sorghum bicolor]
gi|241917074|gb|EER90218.1| hypothetical protein SORBIDRAFT_10g027220 [Sorghum bicolor]
Length = 919
Score = 368 bits (945), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 187/351 (53%), Positives = 245/351 (69%), Gaps = 13/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA+S+ ++PN+ +L PQ+ C++ +V
Sbjct: 31 ELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQLICQLHNV 90
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L ++L+D + E G S K + FCKTLT
Sbjct: 91 TMHADAETDEVYAQMTLQP--------LNPQELKDPYLPAELG--SANKQPTNYFCKTLT 140
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ QQ P QEL+AKDLHG EW+FRHI+RGQP+RHLL
Sbjct: 141 ASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPCQELMAKDLHGNEWKFRHIFRGQPKRHLL 200
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+VLF+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 201 TTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAA 260
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A ST S F +FY+PRA+ ++FVIP KYVK + + I +G RF+M FE ++S RR
Sbjct: 261 AAHAASTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRY 320
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI+DLD RWPNS WR + V WDE + Q +VS WEI+ + P
Sbjct: 321 MGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 371
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 61/86 (70%), Gaps = 2/86 (2%)
Query: 683 KVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMVV 741
KV+K G+ GR++D+ R + Y++L EL LF +EG L DP + GW++++ D E DV++V
Sbjct: 791 KVYKSGT-YGRSLDITRFSSYHELRRELGRLFGLEGQLEDPLRSGWQLVFVDREEDVLLV 849
Query: 742 GDDPWHEFCNEVSKIHIYTQEEVEKM 767
GDDPW EF + VS I I + +EV++M
Sbjct: 850 GDDPWQEFVSTVSCIKILSPQEVQQM 875
>gi|302802197|ref|XP_002982854.1| hypothetical protein SELMODRAFT_179736 [Selaginella moellendorffii]
gi|300149444|gb|EFJ16099.1| hypothetical protein SELMODRAFT_179736 [Selaginella moellendorffii]
Length = 824
Score = 368 bits (945), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 189/372 (50%), Positives = 247/372 (66%), Gaps = 16/372 (4%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPP-IEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G VVYFPQGH EQVA+S+ ++P++ +L P + C++ ++
Sbjct: 27 ELWHACAGPLVSLPSVGTRVVYFPQGHSEQVAASTQKEADADIPSYPNLPPHLVCQLHNI 86
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
L A+ E DEVY Q+ L P + ++ + DLG R P++ FCKTLT
Sbjct: 87 TLHADTETDEVYAQMTLQP---MNAQEKDSFMVSDLGRQ----NRQPSE----YFCKTLT 135
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFS+PRRAAE FPPLD+ QQ P+QE+VA+DLH EWRFRHIYRGQPRRHLL
Sbjct: 136 ASDTSTHGGFSIPRRAAEKVFPPLDFSQQPPAQEIVARDLHDTEWRFRHIYRGQPRRHLL 195
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K L +GDAVLF+R + G+L LGIRR+ + + +P S+LS + Y +L+
Sbjct: 196 TTGWSVFVSAKRLQTGDAVLFIRDEKGQLLLGIRRANRQQASMPLSLLSTDSMYIGILAA 255
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICI--GTRFKMRFEMDDSPERR 355
A+A ST S F +FY+PRA+ ++FVIP KY + N + + G RF+M+FE ++S RR
Sbjct: 256 AAHANSTSSRFTIFYNPRASPSEFVIPLSKYYNAVYNNMQVSPGMRFRMQFETEESGIRR 315
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSP 415
G + G DLDP RWPNS WR L V WDE + Q+++S WEI+ S P L S
Sbjct: 316 HTGTIVGSGDLDPVRWPNSHWRSLKVEWDEPAAGEKQQRISLWEIE-PASTPYLVCSPSF 374
Query: 416 RMKKLRTGLQAP 427
+ R QAP
Sbjct: 375 TFRSKRPWSQAP 386
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/131 (43%), Positives = 80/131 (61%), Gaps = 10/131 (7%)
Query: 646 KDGS---FNGTAAGCKLFGFSLTSETP-----TPSSQSPGKRSCTKVHKQGSLVGRAIDL 697
KDG + TA+ L + T E P + S+Q R+ TKV+K GS VGR++DL
Sbjct: 665 KDGQQRVLSSTASDLHLSSDNGTLEEPAYLQRSSSAQHMLPRTFTKVYKTGS-VGRSLDL 723
Query: 698 WRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMVVGDDPWHEFCNEVSKI 756
RLN Y+ L SEL +F +EG L DP + GW++++ D+ENDV++VGDDPW EF + V I
Sbjct: 724 TRLNCYDGLRSELARMFGLEGQLEDPHRSGWQLVFVDNENDVLLVGDDPWEEFVSCVRCI 783
Query: 757 HIYTQEEVEKM 767
I + E+ M
Sbjct: 784 KIMSPAELSHM 794
>gi|122204131|sp|Q2QQX6.1|ARFX_ORYSJ RecName: Full=Auxin response factor 24
gi|77555450|gb|ABA98246.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
Group]
Length = 841
Score = 368 bits (944), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 231/638 (36%), Positives = 338/638 (52%), Gaps = 52/638 (8%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIE--VPNFDLQPQIFCKV 114
++ ELW ACAGPL ++P G V Y PQGH+EQV +S+ + P ++L +I CKV
Sbjct: 29 LFVELWRACAGPLVTVPAVGERVFYLPQGHIEQVEASTNQVAEQQGAPLYNLPWKIPCKV 88
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTP--HMF 172
++V+L A + DEVY Q+ LLP+ + +G + V+EE P H F
Sbjct: 89 MNVELKAEPDTDEVYAQLTLLPEKQQDGNGSGNGNVSKDKVEEEEVVPPAATERPRVHSF 148
Query: 173 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQP 232
CKTLTASDTSTHGGFSV RR A++C PPLD Q P+QELVAKDLHGVEWRFRHI+RGQP
Sbjct: 149 CKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPTQELVAKDLHGVEWRFRHIFRGQP 208
Query: 233 RRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYP 292
RRHLL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++ + +P S++S + +
Sbjct: 209 RRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSMHL 268
Query: 293 NVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSP 352
VL+ +AV+T +MF V+Y PR + ++FV+P Y + + IG RFKM FE +++
Sbjct: 269 GVLATAWHAVNTGTMFTVYYKPRTSPSEFVVPRDLYKESLKRNHSIGMRFKMTFEGEEAA 328
Query: 353 ERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQ 412
E+R G + G+ D DP W +SKWR L VRWDE ++VSPW+I+ + S P++
Sbjct: 329 EQRFTGTIVGVGDSDPSGWADSKWRSLKVRWDEAASVPRPDRVSPWQIEPANSPSPVNPL 388
Query: 413 SSPRMKKLRTGLQAPPPDYPVSAR--GGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDT 470
+PR K+ R + A PD + V+ + + QEN+ S +
Sbjct: 389 PAPRTKRARPNVLASSPDLSAVNKEVASKVMANSQQNGLPRAFHSQENMNLRSRFGDSNE 448
Query: 471 VNHPLGFEMRAPAHQSLALNGIRKDNINELVRALPTSYTGFVESNRFPKVLQGQEIC--- 527
+N M + K+N++ S+ + ++L G +
Sbjct: 449 LNTSQKLTMWSSGSNQ------EKNNVSVQRELGSQSWMQMRRPDGSSEILSGFQPLKDT 502
Query: 528 --PLRSLTGKVDLNL-GTWGKPNFGCNSMNMY---QASKPNIYPPPSESLSNMFFPYGDM 581
PL S ++ N TW N++N++ Q + N+YP ++ P
Sbjct: 503 RNPLSSFPSQISGNRSNTW-------NTINVHYPDQNANHNMYP----GTWSLMPPNTGF 551
Query: 582 PKTVQHHTMPPYASNLQRE-NVKL--NSSSIQMPAIGAEIRKANLLNEHKPVENI----- 633
Q++ M P + QR N K N + + A G + R + L +P +I
Sbjct: 552 GVNQQNYLMTPDITLPQRSLNAKFGGNGAFTSLRAHGIDQRSSGWLGHIEPSSHIDDASS 611
Query: 634 ----PTP-TFKANMRSHKDGSFNGTAAGCKLFGFSLTS 666
P P N++ K S C LFG SL S
Sbjct: 612 SLIKPQPLVIDHNVQKAKGSS-------CMLFGISLDS 642
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 72/98 (73%)
Query: 674 QSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTD 733
Q+ RSC KVHKQG +GR+IDL + Y++L++EL+ +F+ G L +K W ++YTD
Sbjct: 708 QNGSSRSCKKVHKQGIALGRSIDLTKFTCYDELIAELDQMFDFNGELNSSSKNWMVVYTD 767
Query: 734 SENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGT 771
+E D+M+VGDDPW+EFCN V KI IYT+EEV+KM G
Sbjct: 768 NEGDMMLVGDDPWNEFCNMVHKIFIYTREEVQKMNPGA 805
>gi|38346580|emb|CAE04227.2| OSJNBa0064D20.11 [Oryza sativa Japonica Group]
gi|222628930|gb|EEE61062.1| hypothetical protein OsJ_14920 [Oryza sativa Japonica Group]
Length = 669
Score = 368 bits (944), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 181/365 (49%), Positives = 244/365 (66%), Gaps = 21/365 (5%)
Query: 44 SANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVP 102
+AN S + S +++ ELWHACAGPL ++PK+G V YFPQGH+EQ+ AS++ +P
Sbjct: 4 AANPGGSGTCSDALFRELWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQQLDQYLP 63
Query: 103 NFDLQPQIFCKVVDVQLLANKENDEVYTQVALLP---QPELEGLNLEAKQLEDLGVDEEG 159
F+L +I C VV+V+L A ++DEVY Q+ L P Q EL L+ E + LE
Sbjct: 64 MFNLPSKILCSVVNVELRAEADSDEVYAQIMLQPEADQSELTSLDPELQDLE-------- 115
Query: 160 GGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHG 219
K T H FCKTLTASDTSTHGGFSV RR AE+C P LD Q P QELVAKDLHG
Sbjct: 116 ------KCTAHSFCKTLTASDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHG 169
Query: 220 VEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNG 279
EW FRHI+RGQPRRHLLTTGWS+FVS K LV+GDA +FLRG+ GELR+G+RR ++ N
Sbjct: 170 TEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRLMRQVNN 229
Query: 280 LPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIG 339
+P S++S + + VL+ ++A+ST ++F VFY PR + ++FV+ KY++ + +G
Sbjct: 230 MPSSVISSHSMHLGVLATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKKQNLSVG 289
Query: 340 TRFKMRFEMDDSPERRCNGVVTGITDLDPYR---WPNSKWRCLMVRWDECIGSDHQEQVS 396
RFKMRFE D++PERR +G + GI + W +S W+ L V+WDE ++VS
Sbjct: 290 MRFKMRFEGDEAPERRFSGTIIGIGSVPAMSKSPWADSDWKSLKVQWDEPSAIVRPDRVS 349
Query: 397 PWEID 401
PWE++
Sbjct: 350 PWELE 354
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 74/104 (71%)
Query: 665 TSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPA 724
+SE SQS RSCTKV QG VGRA+DL +LNGY DL S+LE +F+++G L
Sbjct: 529 SSERSPLESQSRQVRSCTKVIMQGMAVGRAVDLTKLNGYGDLRSKLEEMFDIQGDLCPTL 588
Query: 725 KGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
K W+++YTD E+D+M+VGDDPW EFC+ V +I+IY+ EE + +
Sbjct: 589 KRWQVVYTDDEDDMMLVGDDPWDEFCSMVKRIYIYSYEEAKLLA 632
>gi|296278602|gb|ADH04265.1| ARF1 [Nicotiana benthamiana]
Length = 889
Score = 368 bits (944), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 188/363 (51%), Positives = 250/363 (68%), Gaps = 12/363 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA+S+ +PN+ L PQ+ C++ ++
Sbjct: 25 ELWHACAGPLVSLPPVGSGVVYFPQGHSEQVAASTNKEVDAHIPNYPGLPPQLICQLHNL 84
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L A++ +D+ + G P+K + FCKTLT
Sbjct: 85 TMHADVETDEVYAQMTLQP--------LSAQEQKDVCLLPAELG-IPSKQPTNYFCKTLT 135
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLDY QQ P QEL+AKDLHG EW+FRHI+RGQP+RHLL
Sbjct: 136 ASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPCQELIAKDLHGNEWKFRHIFRGQPKRHLL 195
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GDAV+F+ ++ +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 196 TTGWSVFVSAKRLVAGDAVIFIWNENNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAA 255
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F +FY+PRA+ ++FVIP KY K + + I +G RF+M FE ++S RR
Sbjct: 256 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYAKAVYHTRISVGMRFRMLFETEESSVRRY 315
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPR 416
G +TGI+DLDP RWPNS WR + V WDE + Q +VS WEI+ + P S R
Sbjct: 316 MGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFSLR 375
Query: 417 MKK 419
+K+
Sbjct: 376 LKR 378
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 73/108 (67%), Gaps = 4/108 (3%)
Query: 661 GFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLL 720
GF +SE ++P R+ KVHK GS GR++D+ + + Y++L SEL H+F +EGLL
Sbjct: 739 GFLQSSENG--DQRNPTNRTFVKVHKSGSF-GRSLDISKFSNYHELRSELAHMFGLEGLL 795
Query: 721 RDPAK-GWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
DP + GW++++ D ENDV+++GDDPW EF N V I I + EV++M
Sbjct: 796 EDPERSGWQLVFVDRENDVLLLGDDPWQEFVNNVWYIKILSPLEVQQM 843
>gi|356520147|ref|XP_003528726.1| PREDICTED: auxin response factor 1-like [Glycine max]
Length = 674
Score = 368 bits (944), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 183/389 (47%), Positives = 258/389 (66%), Gaps = 23/389 (5%)
Query: 40 SSSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPI 99
+S+ + + +++ +Y ELWHACAGPL +LP++G V YFPQGH+EQ+ +S + +
Sbjct: 2 ASTLKSGGIHTGAINDDLYKELWHACAGPLVTLPREGERVYYFPQGHMEQL-EASMYEGL 60
Query: 100 E--VPNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDE 157
E +P+F+L +I CKVV+V L A E DEVY Q+ LLP EA Q E D+
Sbjct: 61 EQQMPSFNLPSKILCKVVNVHLRAEPETDEVYAQITLLP---------EADQSEVTSPDD 111
Query: 158 EGGGRSPTKSTP----HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELV 213
P +P H FCKTLTASDTSTHGGFSV RR A+DC PPLD QQ P QELV
Sbjct: 112 ------PLPESPRVKIHSFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELV 165
Query: 214 AKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRS 273
A DLHG EW FRHI+RGQP+RHLLTTGWS+FVS K L +GDA +FLRG++GELR+G+RR
Sbjct: 166 ATDLHGNEWHFRHIFRGQPKRHLLTTGWSVFVSSKKLAAGDAFIFLRGENGELRVGVRRV 225
Query: 274 VQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIM 333
++ ++ +P S++S + + VL+ ++A++T ++F VFY PR + ++F++ KY+++
Sbjct: 226 MRQQSNVPSSVISSHSMHLGVLATASHAIATGTLFSVFYKPRTSRSEFIVSVNKYLEVQS 285
Query: 334 NPICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYR-WPNSKWRCLMVRWDECIGSDHQ 392
+ + +G RFKMRFE D+ PERR +G + G+ D WP+S+WR L V+WDE
Sbjct: 286 HKLSVGMRFKMRFEGDEIPERRFSGTIVGVGDNKSSSVWPDSEWRSLKVQWDEPSSILRP 345
Query: 393 EQVSPWEIDRSVSLPPLSIQSSPRMKKLR 421
++VS WE++ VS + Q + R K+ R
Sbjct: 346 DRVSSWELEPLVSTTLANSQPTQRNKRAR 374
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 56/96 (58%), Positives = 73/96 (76%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYT 732
SQS RSCTKVH QG VGRA+DL R +GY DLL +LE +FN++ L K W+++YT
Sbjct: 544 SQSKQIRSCTKVHMQGMAVGRAVDLTRFDGYEDLLRKLEDMFNIKTELCGSLKKWQVVYT 603
Query: 733 DSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
D+E+D+M+VGDDPW EFC+ V KI IYT EEV+K++
Sbjct: 604 DNEDDMMMVGDDPWDEFCSVVRKIFIYTAEEVKKLS 639
>gi|308080234|ref|NP_001183800.1| hypothetical protein [Zea mays]
gi|238014618|gb|ACR38344.1| unknown [Zea mays]
gi|407232702|gb|AFT82693.1| ARF14 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|413922703|gb|AFW62635.1| hypothetical protein ZEAMMB73_114282 [Zea mays]
Length = 511
Score = 368 bits (944), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 185/376 (49%), Positives = 248/376 (65%), Gaps = 15/376 (3%)
Query: 50 SSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQP 108
S S +++ ELWHACAGPL ++P++G +V YFPQGH+EQ+ AS+ +P FDL P
Sbjct: 10 SGSAGDALFRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLFDLPP 69
Query: 109 QIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKST 168
+I CKVV+V+L A ++DEVY Q+ L P EA Q E D E P +
Sbjct: 70 KILCKVVNVELRAETDSDEVYAQIMLQP---------EADQSEPTSPDSEPP--EPERCN 118
Query: 169 PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIY 228
+ FCKTLTASDTSTHGGFSV RR AE+C P LD Q P QEL+AKDLHG EW FRHI+
Sbjct: 119 VYSFCKTLTASDTSTHGGFSVLRRHAEECLPQLDMTQNPPWQELLAKDLHGNEWHFRHIF 178
Query: 229 RGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQ 288
RGQPRRHLLTTGWS+FVS K LV+GDA +FLRG++GELR+G+RR ++ N +P S++S
Sbjct: 179 RGQPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSH 238
Query: 289 NSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEM 348
N + VL+ ++A+ST ++F VFY PR + ++FV+ KY++ + + +G RFKMRFE
Sbjct: 239 NMHLGVLATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKNHKVSVGMRFKMRFEG 298
Query: 349 DDSPERRCNGVVTGITDLDPYR---WPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS 405
D+SPERR +G + G+ + W NS WR L V+WDE ++VSPWE++ +
Sbjct: 299 DESPERRLSGTIIGLGSMPANSTSPWANSDWRSLRVQWDEPSAILRPDRVSPWELEPLDA 358
Query: 406 LPPLSIQSSPRMKKLR 421
P Q R K+ R
Sbjct: 359 TNPQPPQPHLRNKRAR 374
>gi|224079698|ref|XP_002305917.1| predicted protein [Populus trichocarpa]
gi|222848881|gb|EEE86428.1| predicted protein [Populus trichocarpa]
Length = 827
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 186/351 (52%), Positives = 243/351 (69%), Gaps = 13/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA+++ +PN+ L PQ+ C++ +V
Sbjct: 22 ELWHACAGPLVSLPTAGSRVVYFPQGHSEQVAATTNKEVDAHIPNYPSLPPQLICQLHNV 81
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P E E DLG+ P+K + FCKTLT
Sbjct: 82 TMHADVETDEVYAQMTLQPLTPQE--QKETFLPMDLGM--------PSKQPTNYFCKTLT 131
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+A+DLH VEW+FRHI+RGQP+RHLL
Sbjct: 132 ASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 191
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+VLF+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 192 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAA 251
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F VFY+PRA+ ++FVIP KYVK + + I +G RF+M FE ++S RR
Sbjct: 252 AAHAAATNSCFTVFYNPRASPSEFVIPLSKYVKAVFHTRISVGMRFRMLFETEESSVRRY 311
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI+DLDP RWPNS WR + V WDE + Q +VS WEI+ + P
Sbjct: 312 MGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 362
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 99/188 (52%), Gaps = 20/188 (10%)
Query: 589 TMPPYASNLQRENVKLNSSSIQMPAI-GAEIRKANLLNEHKPVENIPTPTFKANMRSH-- 645
T P +++ EN SS Q P + GA I + LL V T + A++ S
Sbjct: 630 TYPEKDPSMEAENC---SSDAQNPTLFGANIDSSGLLLP-TTVPRYSTSSIDADVSSMPL 685
Query: 646 KDGSFNGTAAGC-----KLFGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRL 700
D F + GC +L + + PTPS + KV+K GS VGR++D+ R
Sbjct: 686 GDSGFQNSLYGCVQDSSELLSNAGQMDPPTPSG------TFVKVYKSGS-VGRSLDISRF 738
Query: 701 NGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIY 759
+ Y++L EL +F +EG L +P + GW++++ D ENDV+++GDDPW F N V I I
Sbjct: 739 SSYHELRGELAQMFGIEGKLENPHRSGWQLVFVDRENDVLLLGDDPWELFVNNVWYIKIL 798
Query: 760 TQEEVEKM 767
+ E+V K+
Sbjct: 799 SPEDVLKL 806
>gi|449506738|ref|XP_004162834.1| PREDICTED: auxin response factor 8-like [Cucumis sativus]
Length = 854
Score = 367 bits (943), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 184/351 (52%), Positives = 245/351 (69%), Gaps = 13/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G VVYFPQGH EQVA+++ +PN+ +L PQ+ C++ +V
Sbjct: 24 ELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNKEVDGHIPNYPNLPPQLICQLHNV 83
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A E DEVY Q+ L P L A++ +D + E G P++ + FCKTLT
Sbjct: 84 TMHAVVETDEVYAQMTLQP--------LTAQEQKDTFLPMELG--IPSRQPTNYFCKTLT 133
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+AKDLH +EW+FRHI+RGQP+RHLL
Sbjct: 134 ASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIAKDLHDIEWKFRHIFRGQPKRHLL 193
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+VLF+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 194 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAA 253
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F VFY+PRA+ ++FVIP KYVK + + + +G RF+M FE ++S RR
Sbjct: 254 AAHAAATNSCFTVFYNPRASPSEFVIPLTKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 313
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI+DLDP RWPNS WR + V WDE + Q +VS WEI+ + P
Sbjct: 314 MGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 364
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 62/91 (68%), Gaps = 3/91 (3%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEG-LLRDPAK-GWRILYTDSEN 736
R+ KV+K GS VGR++D+ R + Y +L EL +F +EG L+ DP + GW++++ D EN
Sbjct: 728 RTFVKVYKTGS-VGRSLDISRFSSYQELREELAQMFGIEGQLVEDPRRSGWQLVFVDREN 786
Query: 737 DVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
DV+++GDDPW F N V I I + E+ +K+
Sbjct: 787 DVLLLGDDPWEAFVNNVGFIKILSPEDFQKL 817
>gi|222539816|gb|ACM66271.1| ARF8 [Solanum melongena]
Length = 891
Score = 367 bits (942), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 189/363 (52%), Positives = 248/363 (68%), Gaps = 12/363 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA+S+ +PN+ L PQ+ C++ ++
Sbjct: 25 ELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPGLPPQLICQLHNL 84
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P E ++ E LG+ P+K + FCKTLT
Sbjct: 85 TMHADVETDEVYAQMTLQPLSPQEQKDVCLLPAE-LGI--------PSKQPTNYFCKTLT 135
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
AS TSTHGGFSVPRRAAE FPPLDY QQ P QEL+AKDLHG EW+FRHI+RGQP+RHLL
Sbjct: 136 ASGTSTHGGFSVPRRAAEKVFPPLDYSQQPPCQELIAKDLHGNEWKFRHIFRGQPKRHLL 195
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GDAV+F+ ++ +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 196 TTGWSVFVSAKRLVAGDAVIFIWNENNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAA 255
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F +FY+PRA+ ++FVIP KYVK + + I +G RF+M FE ++S RR
Sbjct: 256 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRY 315
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPR 416
G +TGI+DLDP RWPNS WR + V WDE D Q +VS WEI+ + P S R
Sbjct: 316 MGTITGISDLDPVRWPNSHWRSVKVGWDESTAGDRQPRVSLWEIEPLTTFPMYPSPFSLR 375
Query: 417 MKK 419
+K+
Sbjct: 376 LKR 378
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/117 (42%), Positives = 74/117 (63%), Gaps = 5/117 (4%)
Query: 653 TAAGC-KLFGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELE 711
TA+ C GF +SE ++Q+ R KV K GS GR++D+ + + Y++L SEL
Sbjct: 732 TASSCVDESGFLQSSENGDQANQT--NRIFVKVQKSGSF-GRSLDISKFSSYHELRSELA 788
Query: 712 HLFNMEGLLRDPAK-GWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
+F +EGLL DP + GW+++ D ENDV+++GDDPW EF N V I I + EV++M
Sbjct: 789 RMFGLEGLLEDPERSGWQLVIVDRENDVLLLGDDPWQEFVNNVWYIKILSPYEVQQM 845
>gi|413926489|gb|AFW66421.1| hypothetical protein ZEAMMB73_859793 [Zea mays]
Length = 914
Score = 367 bits (942), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 188/353 (53%), Positives = 246/353 (69%), Gaps = 17/353 (4%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA+S+ ++PN+ L PQ+ C++ +V
Sbjct: 30 ELWHACAGPLVSLPSVGSRVVYFPQGHGEQVAASTNKEMEAQIPNYPSLPPQLICQLHNV 89
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRS--PTKSTPHMFCKT 175
+ A+ E DEVY Q+ L P L ++L+D + E G S PT + FCKT
Sbjct: 90 TMHADAETDEVYAQMTLQP--------LSPQELKDPFLPAELGTASNQPT----NYFCKT 137
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
LTASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+AKDLHG +W+FRHI+RGQP+RH
Sbjct: 138 LTASDTSTHGGFSVPRRAAEKVFPPLDFNQQPPAQELIAKDLHGNDWKFRHIFRGQPKRH 197
Query: 236 LLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVL 295
LLTTGWS+FVS K LV+GD+VLF+ + +L LGIRR+ +P+ +P S+LS + + +L
Sbjct: 198 LLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLL 257
Query: 296 SVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPER 354
+ A+A ST S F +FY+PRA+ +FVIP KYVK + + I +G RF+M FE ++S R
Sbjct: 258 AAAAHAASTNSRFTIFYNPRASPCEFVIPMAKYVKAVYHTRISVGMRFRMLFETEESSVR 317
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
R G +TGI+DLDP RWPNS WR + V WDE + Q +VS WEI+ + P
Sbjct: 318 RYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPLTTFP 370
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 63/87 (72%), Gaps = 2/87 (2%)
Query: 682 TKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMV 740
KV+K G+ VGR +D+ R + Y++L SE+ LF +EG L DP + GW++++ D E+DV++
Sbjct: 785 VKVYKSGT-VGRLLDITRFSSYDELRSEVGRLFGLEGQLEDPLRSGWQLVFVDREDDVLL 843
Query: 741 VGDDPWHEFCNEVSKIHIYTQEEVEKM 767
VGDDPW EF N VS I I + EEV++M
Sbjct: 844 VGDDPWQEFVNSVSCIKILSPEEVQRM 870
>gi|379323186|gb|AFD01292.1| auxin response factor 1 [Brassica rapa subsp. pekinensis]
Length = 665
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 187/391 (47%), Positives = 258/391 (65%), Gaps = 16/391 (4%)
Query: 52 SLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQI 110
+LS ++ ELWHACAGPL +LP++G V YFP+GH+EQ+ AS ++P+F+L +I
Sbjct: 14 ALSDALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKI 73
Query: 111 FCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPH 170
CKV+++Q A E DEVY Q+ LLP EA Q E + D + P K T H
Sbjct: 74 LCKVINIQRRAEPETDEVYAQITLLP---------EADQSEPMSPD--APVQEPEKCTVH 122
Query: 171 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRG 230
FCKTLTASDTSTHGGFSV RR A+DC PPLD QQ P QELVA DLH EW FRHI+RG
Sbjct: 123 SFCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNNEWHFRHIFRG 182
Query: 231 QPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNS 290
QPRRHLLTTGWS+FVS K LV+GDA +FLRG++ ELR+G+RR ++ + +P S++S +
Sbjct: 183 QPRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSM 242
Query: 291 YPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDD 350
+ VL+ A+A++T ++F VFY PR + ++F++ +Y++ + +G RFKMRFE ++
Sbjct: 243 HIGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKNQKLAVGMRFKMRFEGEE 302
Query: 351 SPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLS 410
+PE+R +G + G+ + W +S+WR L V+WDE E+VSPWE++ V+ S
Sbjct: 303 APEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANNTPS 362
Query: 411 IQSSP-RMKKLR-TGLQAP--PPDYPVSARG 437
P R K+ R GL +P P PV+A G
Sbjct: 363 AHLPPQRNKRPRPPGLLSPTTAPSTPVTADG 393
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 72/96 (75%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYT 732
SQS RSCTKVH QGS VGRA+DL R Y DL +LE +F+++G L + K W+++YT
Sbjct: 536 SQSRQIRSCTKVHMQGSAVGRAVDLTRSECYEDLFKKLEEMFDIKGELLESTKKWQVVYT 595
Query: 733 DSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
D E+D+M+VGDDPW+EFC V KI IYT EEV+K++
Sbjct: 596 DDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLS 631
>gi|295844310|gb|ADG43152.1| auxin response factor 18 [Zea mays]
Length = 913
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 189/352 (53%), Positives = 245/352 (69%), Gaps = 15/352 (4%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIE--VPNF-DLQPQIFCKVVD 116
ELWHACAGPL SLP G+ VVYFPQGH EQVA+S+ IE +PN+ +L PQ+ C++ +
Sbjct: 30 ELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTN-KEIESQIPNYPNLPPQLICQLHN 88
Query: 117 VQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTL 176
V + A+ E DEVY Q+ L P L ++L+D + E G S K + FCKTL
Sbjct: 89 VTMHADAETDEVYAQMTLQP--------LNPQELKDPYLPAELG--SANKQPTNYFCKTL 138
Query: 177 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHL 236
TASDTSTHGGFSVPRRAAE FPPLD+ QQ P QEL+AKDLHG EW+FRHI+RGQP+RHL
Sbjct: 139 TASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPCQELMAKDLHGNEWKFRHIFRGQPKRHL 198
Query: 237 LTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLS 296
LTTGWS+FVS K LV+GD+VLF+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 199 LTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLA 258
Query: 297 VVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERR 355
A+A ST S F +FY+PRA+ ++FVIP KYVK + + I +G RF+M FE ++S RR
Sbjct: 259 AAAHAASTNSRFTIFYNPRASPSEFVIPLVKYVKAVYHTRISVGMRFRMLFETEESSVRR 318
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI DLD RWPNS WR + V WDE + Q +VS WEI+ + P
Sbjct: 319 YMGTITGICDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 370
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 61/87 (70%), Gaps = 2/87 (2%)
Query: 682 TKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMV 740
KV+K G+ GR++D+ R + Y++L EL LF +EG L DP + GW++++ + E DV++
Sbjct: 783 VKVYKSGT-YGRSLDITRFSSYHELRRELGRLFGLEGQLEDPLRSGWQLVFVNREEDVLL 841
Query: 741 VGDDPWHEFCNEVSKIHIYTQEEVEKM 767
VGDDPW EF + VS I I + +EV++M
Sbjct: 842 VGDDPWQEFVSTVSCIKILSPQEVQQM 868
>gi|295844306|gb|ADG43150.1| auxin response factor 16 [Zea mays]
Length = 905
Score = 367 bits (941), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 188/353 (53%), Positives = 246/353 (69%), Gaps = 17/353 (4%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA+S+ ++PN+ L PQ+ C++ +V
Sbjct: 21 ELWHACAGPLVSLPSVGSRVVYFPQGHGEQVAASTNKEMEAQIPNYPSLPPQLICQLHNV 80
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRS--PTKSTPHMFCKT 175
+ A+ E DEVY Q+ L P L ++L+D + E G S PT + FCKT
Sbjct: 81 TMHADAETDEVYAQMTLQP--------LSPQELKDPFLPAELGTASNQPT----NYFCKT 128
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
LTASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+AKDLHG +W+FRHI+RGQP+RH
Sbjct: 129 LTASDTSTHGGFSVPRRAAEKVFPPLDFNQQPPAQELIAKDLHGNDWKFRHIFRGQPKRH 188
Query: 236 LLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVL 295
LLTTGWS+FVS K LV+GD+VLF+ + +L LGIRR+ +P+ +P S+LS + + +L
Sbjct: 189 LLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLL 248
Query: 296 SVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPER 354
+ A+A ST S F +FY+PRA+ +FVIP KYVK + + I +G RF+M FE ++S R
Sbjct: 249 AAAAHAASTNSRFTIFYNPRASPCEFVIPMAKYVKAVYHTRISVGMRFRMLFETEESSVR 308
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
R G +TGI+DLDP RWPNS WR + V WDE + Q +VS WEI+ + P
Sbjct: 309 RYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPLTTFP 361
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 63/87 (72%), Gaps = 2/87 (2%)
Query: 682 TKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMV 740
KV+K G+ VGR +D+ R + Y++L SE+ LF +EG L DP + GW++++ D E+DV++
Sbjct: 776 VKVYKSGT-VGRLLDITRFSSYDELRSEVGRLFGLEGQLEDPLRSGWQLVFVDREDDVLL 834
Query: 741 VGDDPWHEFCNEVSKIHIYTQEEVEKM 767
VGDDPW EF N VS I I + EEV++M
Sbjct: 835 VGDDPWQEFVNSVSCIKILSPEEVQRM 861
>gi|161579976|gb|ABN10955.2| auxin response factor 8 [Ipomoea nil]
Length = 838
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 186/363 (51%), Positives = 250/363 (68%), Gaps = 12/363 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQV AS++ +P++ L Q+ C++ +V
Sbjct: 25 ELWHACAGPLVSLPPLGSRVVYFPQGHSEQVTASTNKEIDAHIPSYPGLPAQLICQLHNV 84
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L A++ +D+ + G P+K + FCKTLT
Sbjct: 85 TMHADNETDEVYAQMTLQP--------LSAQEQKDVCLLPAELGM-PSKQPTNYFCKTLT 135
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLDY QQ P+QEL+AKDLHG EW+FRH++RGQP+RHLL
Sbjct: 136 ASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIAKDLHGNEWKFRHVFRGQPKRHLL 195
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GDAV+F+ ++ +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 196 TTGWSVFVSAKRLVAGDAVIFIWNENNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAA 255
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F +FY+PRA+ +DFVIP KY K + + + +G RF+M FE ++S RR
Sbjct: 256 AAHAAATNSRFTIFYNPRASPSDFVIPLAKYAKAVYHTRVSVGMRFRMLFETEESSVRRY 315
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPR 416
G +TGI+DLDP RWPNS WR + V WDE + Q +VS WEI+ + P S R
Sbjct: 316 MGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYSSLFPLR 375
Query: 417 MKK 419
+K+
Sbjct: 376 LKR 378
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 64/90 (71%), Gaps = 2/90 (2%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSEND 737
R+ KV+K G VGR++D+ R++ Y++L EL +F +EGLL DP + GW++++ D END
Sbjct: 712 RTFIKVYKSG-YVGRSLDITRISSYHELRQELAQMFGIEGLLEDPQRSGWQLVFVDREND 770
Query: 738 VMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
V+++GDDPW F N V I I + E+V+K+
Sbjct: 771 VLLLGDDPWEAFVNNVWYIKILSPEDVQKL 800
>gi|19352041|dbj|BAB85914.1| auxin response factor 6a [Oryza sativa]
Length = 396
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 203/407 (49%), Positives = 265/407 (65%), Gaps = 23/407 (5%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA+S+ ++PN+ +L PQ+ C++ +V
Sbjct: 9 ELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPNYPNLPPQLICQLHNV 68
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L ++L+D + E G S K + FCKTLT
Sbjct: 69 TMHADAETDEVYAQMTLQP--------LSPQELKDPFLPAELGTAS--KQPTNYFCKTLT 118
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+AKDLHG EW+FRHI+RGQP+RHLL
Sbjct: 119 ASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELMAKDLHGNEWKFRHIFRGQPKRHLL 178
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+VLF+ +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 179 TTGWSVFVSAKRLVAGDSVLFIWNDSNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAA 238
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A ST S F +FY+PRA+ ++FVIP KYVK + + I +G RF+M FE ++S RR
Sbjct: 239 AAHAASTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRY 298
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPR 416
G +TGI+DLDP RW NS WR + V WDE + Q +VS WEI+ + P P
Sbjct: 299 MGTITGISDLDPVRWMNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP-----MYPS 353
Query: 417 MKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVS 463
LR L+ P P S GG D S+ L+ +N GF S
Sbjct: 354 PFPLR--LKRPWPTGLPSLYGGKEDDLASSL---MWLRDSQNTGFQS 395
>gi|32479677|emb|CAE02512.1| P0076O17.10 [Oryza sativa Japonica Group]
Length = 1673
Score = 366 bits (940), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 181/365 (49%), Positives = 244/365 (66%), Gaps = 21/365 (5%)
Query: 44 SANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVP 102
+AN S + S +++ ELWHACAGPL ++PK+G V YFPQGH+EQ+ AS++ +P
Sbjct: 4 AANPGGSGTCSDALFRELWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQQLDQYLP 63
Query: 103 NFDLQPQIFCKVVDVQLLANKENDEVYTQVALLP---QPELEGLNLEAKQLEDLGVDEEG 159
F+L +I C VV+V+L A ++DEVY Q+ L P Q EL L+ E + LE
Sbjct: 64 MFNLPSKILCSVVNVELRAEADSDEVYAQIMLQPEADQSELTSLDPELQDLE-------- 115
Query: 160 GGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHG 219
K T H FCKTLTASDTSTHGGFSV RR AE+C P LD Q P QELVAKDLHG
Sbjct: 116 ------KCTAHSFCKTLTASDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHG 169
Query: 220 VEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNG 279
EW FRHI+RGQPRRHLLTTGWS+FVS K LV+GDA +FLRG+ GELR+G+RR ++ N
Sbjct: 170 TEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRLMRQVNN 229
Query: 280 LPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIG 339
+P S++S + + VL+ ++A+ST ++F VFY PR + ++FV+ KY++ + +G
Sbjct: 230 MPSSVISSHSMHLGVLATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKKQNLSVG 289
Query: 340 TRFKMRFEMDDSPERRCNGVVTGITDLDPYR---WPNSKWRCLMVRWDECIGSDHQEQVS 396
RFKMRFE D++PERR +G + GI + W +S W+ L V+WDE ++VS
Sbjct: 290 MRFKMRFEGDEAPERRFSGTIIGIGSVPAMSKSPWADSDWKSLKVQWDEPSAIVRPDRVS 349
Query: 397 PWEID 401
PWE++
Sbjct: 350 PWELE 354
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 46/85 (54%), Positives = 61/85 (71%)
Query: 665 TSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPA 724
+SE SQS RSCTKV QG VGRA+DL +LNGY DL S+LE +F+++G L
Sbjct: 411 SSERSPLESQSRQVRSCTKVIMQGMAVGRAVDLTKLNGYGDLRSKLEEMFDIQGDLCPTL 470
Query: 725 KGWRILYTDSENDVMVVGDDPWHEF 749
K W+++YTD E+D+M+VGDDPW +F
Sbjct: 471 KRWQVVYTDDEDDMMLVGDDPWEKF 495
>gi|218194918|gb|EEC77345.1| hypothetical protein OsI_16025 [Oryza sativa Indica Group]
Length = 660
Score = 366 bits (940), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 181/365 (49%), Positives = 244/365 (66%), Gaps = 21/365 (5%)
Query: 44 SANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVP 102
+AN S + S +++ ELWHACAGPL ++PK+G V YFPQGH+EQ+ AS++ +P
Sbjct: 4 AANPGGSGTCSDALFRELWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQQLDQYLP 63
Query: 103 NFDLQPQIFCKVVDVQLLANKENDEVYTQVALLP---QPELEGLNLEAKQLEDLGVDEEG 159
F+L +I C VV+V+L A ++DEVY Q+ L P Q EL L+ E + LE
Sbjct: 64 MFNLPSKILCSVVNVELRAEADSDEVYAQIMLQPEADQSELTSLDPELQDLE-------- 115
Query: 160 GGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHG 219
K T H FCKTLTASDTSTHGGFSV RR AE+C P LD Q P QELVAKDLHG
Sbjct: 116 ------KCTAHSFCKTLTASDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHG 169
Query: 220 VEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNG 279
EW FRHI+RGQPRRHLLTTGWS+FVS K LV+GDA +FLRG+ GELR+G+RR ++ N
Sbjct: 170 TEWHFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRLMRQVNN 229
Query: 280 LPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIG 339
+P S++S + + VL+ ++A+ST ++F VFY PR + ++FV+ KY++ + +G
Sbjct: 230 MPSSVISSHSMHLGVLATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKKQNLSVG 289
Query: 340 TRFKMRFEMDDSPERRCNGVVTGITDLDPYR---WPNSKWRCLMVRWDECIGSDHQEQVS 396
RFKMRFE D++PERR +G + GI + W +S W+ L V+WDE ++VS
Sbjct: 290 MRFKMRFEGDEAPERRFSGTIIGIGSVPAMSKSPWADSDWKSLKVQWDEPSAIVCPDRVS 349
Query: 397 PWEID 401
PWE++
Sbjct: 350 PWELE 354
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 102/210 (48%), Gaps = 52/210 (24%)
Query: 611 MPAIGAEIRKANLLNEH--KPVENIPTPTFKANMRSHKDGSFNG-------------TAA 655
P+I A I A+ E K +I + F +MR K SF+ T
Sbjct: 414 FPSIPASIFSASSHVEFNSKNEPSILSNQFYWSMRDSKTDSFSASTNKARVERKQEPTTM 473
Query: 656 GCKLFGFSLTS--ETPTPS------------------------------SQSPGKRS--- 680
GC+LFG ++S E P+ S +PG S
Sbjct: 474 GCRLFGIEISSAVEEALPAATVSGVGYDQTVLSVDVDSDQISQPSNGNKSDAPGTSSERS 533
Query: 681 --CTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDV 738
KV QG VGRA+DL +LNGY DL S+LE +F+++G L K W+++YTD E+D+
Sbjct: 534 PLSPKVIMQGMAVGRAVDLTKLNGYGDLRSKLEEMFDIQGDLCPTLKRWQVVYTDDEDDM 593
Query: 739 MVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
M+VGDDPW EFC+ V +I+IY+ EE + +
Sbjct: 594 MLVGDDPWDEFCSMVKRIYIYSYEEAKLLA 623
>gi|242065406|ref|XP_002453992.1| hypothetical protein SORBIDRAFT_04g022830 [Sorghum bicolor]
gi|241933823|gb|EES06968.1| hypothetical protein SORBIDRAFT_04g022830 [Sorghum bicolor]
Length = 672
Score = 366 bits (940), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 184/374 (49%), Positives = 249/374 (66%), Gaps = 15/374 (4%)
Query: 52 SLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQI 110
S +++ ELWHACAGPL ++P++G +V YFPQGH+EQ+ AS+ +P F+L P+I
Sbjct: 12 SAGDALFRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLFNLPPKI 71
Query: 111 FCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPH 170
CKVV+V+L A ++DEVY Q+ L P EA+Q E D E P + H
Sbjct: 72 LCKVVNVELRAETDSDEVYAQIMLQP---------EAEQNEPTSPDAEPP--EPERCNVH 120
Query: 171 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRG 230
FCKTLTASDTSTHGGFSV RR AE+C P LD Q P QELVAKDLHG EW FRHI+RG
Sbjct: 121 SFCKTLTASDTSTHGGFSVLRRHAEECLPQLDMTQNPPWQELVAKDLHGNEWHFRHIFRG 180
Query: 231 QPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNS 290
QPRRHLLTTGWS+FVS K LV+GDA +FLRG++GELR+G+RR ++ N +P S++S +
Sbjct: 181 QPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSM 240
Query: 291 YPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDD 350
+ VL+ ++A+ST ++F VFY PR + ++FV+ KY++ + + +G RFKMRFE D+
Sbjct: 241 HLGVLATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKNHKMSVGMRFKMRFEGDE 300
Query: 351 SPERRCNGVVTGITDLDPYR---WPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
SPERR +G + G+ + W NS+WR L V+WDE ++VSPWE++ +
Sbjct: 301 SPERRFSGTIIGLGSMPANSTSPWANSEWRSLKVQWDEPSAILRPDRVSPWELEPLDATN 360
Query: 408 PLSIQSSPRMKKLR 421
P Q R K+ R
Sbjct: 361 PQPPQPPLRNKRAR 374
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/106 (48%), Positives = 75/106 (70%)
Query: 663 SLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRD 722
+ +SE ++S RSCTKV QG VGRA+DL RL+GY+DL +LE +F++ G L
Sbjct: 526 AASSERSPNETESRQVRSCTKVIMQGMAVGRAVDLTRLDGYDDLHRKLEEMFDIHGELSA 585
Query: 723 PAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
+ W+++YTD E+D+M+VGDDPW+EFC V +I+IY+ EE + +T
Sbjct: 586 NLRKWKVVYTDDEDDMMLVGDDPWNEFCRMVKRIYIYSYEEAKSLT 631
>gi|359485334|ref|XP_002282830.2| PREDICTED: auxin response factor 6-like [Vitis vinifera]
Length = 891
Score = 366 bits (939), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 185/351 (52%), Positives = 243/351 (69%), Gaps = 12/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA+S+ +PN+ L PQ+ C++ +V
Sbjct: 23 ELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLAPQLICQLHNV 82
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P E Q E + E G SP+K + FCKTLT
Sbjct: 83 TMHADVETDEVYAQMTLQPLSPQE-------QKEVCLLPAELG--SPSKQPTNYFCKTLT 133
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLDY QQ P+QEL+A+DLHG EW+FRHI+RGQP+RHLL
Sbjct: 134 ASDTSTHGGFSVPRRAAEKVFPPLDYTQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLL 193
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K L++GD+VLF+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 194 TTGWSVFVSAKRLIAGDSVLFIWNEKNQLLLGIRRANRPQTIMPSSVLSSDSMHIGLLAA 253
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F +FY+PRA+ ++FVIP KY K + + + +G RF+M FE ++S RR
Sbjct: 254 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYAKAVYHTRVSVGMRFRMLFETEESSVRRY 313
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI+DLDP RWPNS WR + V WDE + Q +VS WEI+ + P
Sbjct: 314 MGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 364
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 64/94 (68%), Gaps = 2/94 (2%)
Query: 675 SPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTD 733
+P R+ KVHK GS GR++D+ + + Y++L EL +F +EG L DP + GW++++ D
Sbjct: 773 NPPTRTFVKVHKLGSF-GRSLDITKFSSYDELRGELGRMFGLEGRLEDPLRSGWQLVFVD 831
Query: 734 SENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
ENDV+++GDDPW EF N V I I + EV++M
Sbjct: 832 RENDVLLLGDDPWQEFVNNVWYIKILSPLEVQQM 865
>gi|115458558|ref|NP_001052879.1| Os04g0442000 [Oryza sativa Japonica Group]
gi|122240925|sp|Q0JCZ4.1|ARFI_ORYSJ RecName: Full=Auxin response factor 9
gi|113564450|dbj|BAF14793.1| Os04g0442000 [Oryza sativa Japonica Group]
Length = 673
Score = 365 bits (938), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 180/363 (49%), Positives = 242/363 (66%), Gaps = 21/363 (5%)
Query: 46 NSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNF 104
N S + S +++ ELWHACAGPL ++PK+G V YFPQGH+EQ+ AS++ +P F
Sbjct: 10 NPGGSGTCSDALFRELWHACAGPLVTVPKRGERVYYFPQGHMEQLEASTNQQLDQYLPMF 69
Query: 105 DLQPQIFCKVVDVQLLANKENDEVYTQVALLP---QPELEGLNLEAKQLEDLGVDEEGGG 161
+L +I C VV+V+L A ++DEVY Q+ L P Q EL L+ E + LE
Sbjct: 70 NLPSKILCSVVNVELRAEADSDEVYAQIMLQPEADQSELTSLDPELQDLE---------- 119
Query: 162 RSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVE 221
K T H FCKTLTASDTSTHGGFSV RR AE+C P LD Q P QELVAKDLHG E
Sbjct: 120 ----KCTAHSFCKTLTASDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTE 175
Query: 222 WRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLP 281
W FRHI+RGQPRRHLLTTGWS+FVS K LV+GDA +FLRG+ GELR+G+RR ++ N +P
Sbjct: 176 WHFRHIFRGQPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRLMRQVNNMP 235
Query: 282 DSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTR 341
S++S + + VL+ ++A+ST ++F VFY PR + ++FV+ KY++ + +G R
Sbjct: 236 SSVISSHSMHLGVLATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKKQNLSVGMR 295
Query: 342 FKMRFEMDDSPERRCNGVVTGITDLDPYR---WPNSKWRCLMVRWDECIGSDHQEQVSPW 398
FKMRFE D++PERR +G + GI + W +S W+ L V+WDE ++VSPW
Sbjct: 296 FKMRFEGDEAPERRFSGTIIGIGSVPAMSKSPWADSDWKSLKVQWDEPSAIVRPDRVSPW 355
Query: 399 EID 401
E++
Sbjct: 356 ELE 358
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 74/104 (71%)
Query: 665 TSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPA 724
+SE SQS RSCTKV QG VGRA+DL +LNGY DL S+LE +F+++G L
Sbjct: 533 SSERSPLESQSRQVRSCTKVIMQGMAVGRAVDLTKLNGYGDLRSKLEEMFDIQGDLCPTL 592
Query: 725 KGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
K W+++YTD E+D+M+VGDDPW EFC+ V +I+IY+ EE + +
Sbjct: 593 KRWQVVYTDDEDDMMLVGDDPWDEFCSMVKRIYIYSYEEAKLLA 636
>gi|449449170|ref|XP_004142338.1| PREDICTED: auxin response factor 1-like [Cucumis sativus]
Length = 739
Score = 365 bits (937), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 199/426 (46%), Positives = 268/426 (62%), Gaps = 17/426 (3%)
Query: 54 SSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFC 112
S ++Y ELWHACAGPL +LP++ V YFPQGH+EQ+ AS ++P+F+L +I C
Sbjct: 81 SDALYRELWHACAGPLVTLPRQDERVYYFPQGHMEQLEASMHQGLEQQMPSFNLPSKILC 140
Query: 113 KVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMF 172
KVV+V L A + DEVY Q+ LLP E+ Q E D PT+ H F
Sbjct: 141 KVVNVVLRAESDTDEVYAQITLLP---------ESNQNEVTSPDPPLP--EPTRCNVHSF 189
Query: 173 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQP 232
CKTLTASDTSTHGGFSV RR A+DC PPLD QQ P QELVA DLHG +W FRHI+RGQP
Sbjct: 190 CKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNQWHFRHIFRGQP 249
Query: 233 RRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYP 292
RRHLLTTGWS+FVS K LV+GDA +FLRG++GELR+G+RR ++ N +P S++S + +
Sbjct: 250 RRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHL 309
Query: 293 NVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSP 352
VL+ ++A+ST ++F VFY PR + + F++ KY++ + + +G RFKMRFE ++ P
Sbjct: 310 GVLATASHAISTGTLFSVFYKPRTSRSTFLVSLNKYLEAQNHKLSVGMRFKMRFEGEEVP 369
Query: 353 ERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQ 412
ER +G + G+ D W NS+WR L V+WDE ++VS WE++ V+ PLS Q
Sbjct: 370 ERSFSGTIVGLGDNASPGWANSEWRSLKVQWDEPSSILRPDKVSAWELEPLVASNPLSTQ 429
Query: 413 SSPRMKKLR-TGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTV 471
+ R K+ R T L + PD + GG E S S Q ++ + SP +
Sbjct: 430 PTQRNKRPRPTVLPSSSPD--ATVLGGWKPTVESSTFSYAEPQRGRDL-YSSPKFSTAAS 486
Query: 472 NHPLGF 477
N LGF
Sbjct: 487 NS-LGF 491
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/96 (58%), Positives = 74/96 (77%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYT 732
SQS RSCTKVH QG VGRA+DL R N Y+DLL +LE +F++EG L K W+++YT
Sbjct: 608 SQSRQIRSCTKVHMQGIAVGRAVDLTRFNQYDDLLRKLEEMFDIEGELCGSLKKWQVVYT 667
Query: 733 DSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
D E+D+M+VGDDPW+EFC+ V KI IYT EEV++++
Sbjct: 668 DDEDDMMLVGDDPWNEFCSMVRKIFIYTTEEVKRLS 703
>gi|255570473|ref|XP_002526195.1| Auxin response factor, putative [Ricinus communis]
gi|223534499|gb|EEF36199.1| Auxin response factor, putative [Ricinus communis]
Length = 826
Score = 365 bits (937), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 183/351 (52%), Positives = 245/351 (69%), Gaps = 13/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA+++ +PN+ L PQ+ C++ +V
Sbjct: 23 ELWHACAGPLVSLPTVGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLICQLHNV 82
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L ++ +D + E G P+K + FCKTLT
Sbjct: 83 TMHADVETDEVYAQMTLQP--------LTPQEQKDTFLPMELG--MPSKQPTNYFCKTLT 132
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+A+DLH VEW+FRHI+RGQP+RHLL
Sbjct: 133 ASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 192
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+VLF+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAA 252
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F +FY+PRA+ ++FVIP KYVK + + + +G RF+M FE ++S RR
Sbjct: 253 AAHAAATNSCFTIFYNPRASPSEFVIPLSKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 312
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI+DLDP RWPNS WR + V WDE + Q +VS WEI+ + P
Sbjct: 313 MGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 63/90 (70%), Gaps = 2/90 (2%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSEND 737
R+ KV+K GS VGR++D+ R + Y++L EL +F +EG L +P + GW++++ D END
Sbjct: 725 RTFVKVYKLGS-VGRSLDISRFSSYHELREELAQMFGIEGKLENPHRSGWQLVFVDREND 783
Query: 738 VMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
V+++GDDPW F N V I I + E+V+KM
Sbjct: 784 VLLLGDDPWEAFVNNVWYIKILSPEDVQKM 813
>gi|359476473|ref|XP_002266678.2| PREDICTED: auxin response factor 8-like [Vitis vinifera]
Length = 846
Score = 365 bits (937), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 183/351 (52%), Positives = 245/351 (69%), Gaps = 13/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA+++ +PN+ L PQ+ C++ +V
Sbjct: 24 ELWHACAGPLVSLPTVGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLICQLHNV 83
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L ++ +D + E G P+K + FCKTLT
Sbjct: 84 TMHADVETDEVYAQMTLQP--------LTPQEQKDTFLPVELG--IPSKQPTNYFCKTLT 133
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+A+DLH VEW+FRHI+RGQP+RHLL
Sbjct: 134 ASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 193
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+VLF+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 194 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAA 253
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F +FY+PRA+ ++FVIP KYVK + + + +G RF+M FE ++S RR
Sbjct: 254 AAHAAATNSCFTIFYNPRASPSEFVIPLSKYVKAVFHTRVSVGMRFRMLFETEESSVRRY 313
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI+DLDP RWPNS WR + V WDE + Q +VS WEI+ + P
Sbjct: 314 MGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 364
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 76/124 (61%), Gaps = 13/124 (10%)
Query: 650 FNGTAAGC-----KLFGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYN 704
F G+ GC +L + + PTPS R+ KV+K GS VGR++D+ R + Y+
Sbjct: 691 FQGSLFGCVQDPSELLQNAGQVDPPTPS------RTFVKVYKSGS-VGRSLDITRFSSYH 743
Query: 705 DLLSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEE 763
+L EL +F +EG L +P + GW++++ D ENDV+++GDDPW F N V I I + E+
Sbjct: 744 ELREELGQMFGIEGKLENPLRSGWQLVFVDRENDVLLLGDDPWEAFVNNVWYIKILSPED 803
Query: 764 VEKM 767
V+KM
Sbjct: 804 VQKM 807
>gi|295844318|gb|ADG43156.1| auxin response factor 22 [Zea mays]
Length = 925
Score = 365 bits (937), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 201/416 (48%), Positives = 267/416 (64%), Gaps = 23/416 (5%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA+S+ ++P++ +L PQ+ C++ +V
Sbjct: 44 ELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEMESQIPSYPNLPPQLICQLHNV 103
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E +EVY Q+ L P L ++L+D + E G S K + FCKTLT
Sbjct: 104 TMQADAETEEVYAQMTLQP--------LNPQELKDPYLPAELGLVS--KQPTNYFCKTLT 153
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ QQ P QEL+A DLHG EW+FRHI+RGQP+RHLL
Sbjct: 154 ASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPCQELMATDLHGNEWKFRHIFRGQPKRHLL 213
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+VLF+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 214 TTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAA 273
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A ST S F +FY+PRA+ ++FVIP KYVK + + I +G RF+M FE ++S RR
Sbjct: 274 AAHAASTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRY 333
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPR 416
G +TGI+DLD RWPNS WR + V WDE D Q +VS WEI+ + P + R
Sbjct: 334 MGTITGISDLDSVRWPNSHWRSVKVGWDESTAGDRQPRVSLWEIEPLTTFPTYTSPFPLR 393
Query: 417 MKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVN 472
+K+ P P S GG D S+ L+ N GF S +G +N
Sbjct: 394 LKR-------PWPTGLPSLHGGKDDDLANSL---MWLRDTTNPGFQSLNFGGLGMN 439
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 61/86 (70%), Gaps = 2/86 (2%)
Query: 683 KVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMVV 741
KV+K G+ GR++D+ R + Y++L EL LF +EG L DP + GW++++ D E DV++V
Sbjct: 796 KVYKSGT-YGRSLDITRFSSYHELRRELGRLFGLEGQLEDPLRSGWQLVFVDREEDVLLV 854
Query: 742 GDDPWHEFCNEVSKIHIYTQEEVEKM 767
GDDPW EF + VS I I + +EV++M
Sbjct: 855 GDDPWQEFASTVSCIKILSPQEVQQM 880
>gi|30696352|ref|NP_849830.1| auxin response factor 1 [Arabidopsis thaliana]
gi|332195492|gb|AEE33613.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 662
Score = 365 bits (936), Expect = 6e-98, Method: Compositional matrix adjust.
Identities = 182/386 (47%), Positives = 250/386 (64%), Gaps = 16/386 (4%)
Query: 53 LSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIF 111
LS ++ ELWHACAGPL +LP++G V YFP+GH+EQ+ AS ++P+F+L +I
Sbjct: 15 LSDALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKIL 74
Query: 112 CKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHM 171
CKV+++Q A E DEVY Q+ LLP+ L+ D V E P K T H
Sbjct: 75 CKVINIQRRAEPETDEVYAQITLLPE-----LDQSEPTSPDAPVQE------PEKCTVHS 123
Query: 172 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQ 231
FCKTLTASDTSTHGGFSV RR A+DC PPLD QQ P QELVA DLH EW FRHI+RGQ
Sbjct: 124 FCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQ 183
Query: 232 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSY 291
PRRHLLTTGWS+FVS K LV+GDA +FLRG++ ELR+G+RR ++ + +P S++S + +
Sbjct: 184 PRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMH 243
Query: 292 PNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDS 351
VL+ A+A++T ++F VFY PR + ++F++ +Y++ + +G RFKMRFE +++
Sbjct: 244 IGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEA 303
Query: 352 PERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSI 411
PE+R +G + G+ + W +S+WR L V+WDE E+VSPWE++ V+ S
Sbjct: 304 PEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSS 363
Query: 412 QSSPRMKKLRTGLQAPPPDYPVSARG 437
Q P + R PP P A G
Sbjct: 364 QPQPPQRNKRPR----PPGLPSPATG 385
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 56/96 (58%), Positives = 72/96 (75%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYT 732
SQS RSCTKVH QGS VGRAIDL R Y DL +LE +F+++G L + K W+++YT
Sbjct: 533 SQSRQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKKWQVVYT 592
Query: 733 DSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
D E+D+M+VGDDPW+EFC V KI IYT EEV+K++
Sbjct: 593 DDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLS 628
>gi|357150158|ref|XP_003575362.1| PREDICTED: auxin response factor 6-like [Brachypodium distachyon]
Length = 915
Score = 365 bits (936), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 187/363 (51%), Positives = 252/363 (69%), Gaps = 13/363 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ V+YFPQGH EQV AS++ ++PN+ +L PQ+ C++ +V
Sbjct: 30 ELWHACAGPLVSLPAVGSRVLYFPQGHSEQVSASTNKEIESQIPNYPNLPPQLICQLHNV 89
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEV Q+ L P L ++L+D + E G + K + FCKTLT
Sbjct: 90 IMHADAETDEVCAQMTLQP--------LSPQELKDPFLPAELG--TANKQPTNYFCKTLT 139
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+AKDLHG EW+FRHI+RGQP+RHLL
Sbjct: 140 ASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELMAKDLHGNEWKFRHIFRGQPKRHLL 199
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+F+S K LV+GD+VLF+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 200 TTGWSVFISAKRLVAGDSVLFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAA 259
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A ST S F +FY+PRA+ ++FVIP KYVK + + I +G RF+M FE ++S RR
Sbjct: 260 AAHAASTNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRY 319
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPR 416
G +TGI+DLDP RWPNS WR + V WDE + Q +VS WEI+ ++P S R
Sbjct: 320 MGTITGISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTIPMYSSPFPMR 379
Query: 417 MKK 419
+K+
Sbjct: 380 LKR 382
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 78/117 (66%), Gaps = 5/117 (4%)
Query: 653 TAAGC-KLFGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELE 711
T++GC G+ SE P ++ P + KV+K G+ VGR +D+ R + Y++L SEL
Sbjct: 758 TSSGCLDGSGYVPFSENPDQVNRPPA--TFVKVYKSGA-VGRLLDITRFSSYHELRSELG 814
Query: 712 HLFNMEGLLRDPAK-GWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
HLF +EG L DP + GW++++ D ENDV++VGDDPW EF N VS I I + +EV++M
Sbjct: 815 HLFGLEGQLEDPVRSGWQLVFVDRENDVLLVGDDPWQEFVNSVSCIKILSPQEVQQM 871
>gi|297840605|ref|XP_002888184.1| hypothetical protein ARALYDRAFT_475338 [Arabidopsis lyrata subsp.
lyrata]
gi|297334025|gb|EFH64443.1| hypothetical protein ARALYDRAFT_475338 [Arabidopsis lyrata subsp.
lyrata]
Length = 665
Score = 365 bits (936), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 184/391 (47%), Positives = 254/391 (64%), Gaps = 17/391 (4%)
Query: 53 LSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIF 111
LS ++ ELWHACAGPL +LP++G V YFP+GH+EQ+ AS ++P+F+L +I
Sbjct: 15 LSDALCTELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKIL 74
Query: 112 CKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHM 171
CKV+++Q A E DEVY Q+ LLP+ L+ D V E P K T H
Sbjct: 75 CKVINIQRRAEPETDEVYAQITLLPE-----LDQNEPTSPDAPVQE------PEKCTVHS 123
Query: 172 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQ 231
FCKTLTASDTSTHGGFSV RR A+DC PPLD QQ P QELVA DLH EW FRHI+RGQ
Sbjct: 124 FCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNNEWHFRHIFRGQ 183
Query: 232 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSY 291
PRRHLLTTGWS+FVS K LV+GDA +FLRG++ ELR+G+RR ++ + +P S++S + +
Sbjct: 184 PRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMH 243
Query: 292 PNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDS 351
VL+ A+A++T ++F VFY PR + ++F++ +Y++ + +G RFKMRFE +++
Sbjct: 244 IGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEA 303
Query: 352 PERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSI 411
PE+R +G + G+ + W +S+WR L V+WDE E+VSPWE++ V+ S
Sbjct: 304 PEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSS 363
Query: 412 QSSPRMKKLR---TGLQAPP--PDYPVSARG 437
Q P + R GL +P P PV+ G
Sbjct: 364 QPQPPQRNKRPRPPGLPSPTTGPSAPVTPDG 394
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 70/96 (72%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYT 732
SQS RSCTKVH QGS VGRA+DL R Y DL +LE +F ++G L K W+++YT
Sbjct: 536 SQSRQIRSCTKVHMQGSAVGRAVDLTRSECYEDLFKKLEEMFEIKGELLKSTKKWQVVYT 595
Query: 733 DSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
D E+D+M+VGDDPW+EFC V KI IYT EEV+K++
Sbjct: 596 DDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLS 631
>gi|302143499|emb|CBI22060.3| unnamed protein product [Vitis vinifera]
Length = 836
Score = 365 bits (936), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 185/351 (52%), Positives = 243/351 (69%), Gaps = 12/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA+S+ +PN+ L PQ+ C++ +V
Sbjct: 23 ELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLAPQLICQLHNV 82
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P E Q E + E G SP+K + FCKTLT
Sbjct: 83 TMHADVETDEVYAQMTLQPLSPQE-------QKEVCLLPAELG--SPSKQPTNYFCKTLT 133
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLDY QQ P+QEL+A+DLHG EW+FRHI+RGQP+RHLL
Sbjct: 134 ASDTSTHGGFSVPRRAAEKVFPPLDYTQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLL 193
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K L++GD+VLF+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 194 TTGWSVFVSAKRLIAGDSVLFIWNEKNQLLLGIRRANRPQTIMPSSVLSSDSMHIGLLAA 253
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F +FY+PRA+ ++FVIP KY K + + + +G RF+M FE ++S RR
Sbjct: 254 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYAKAVYHTRVSVGMRFRMLFETEESSVRRY 313
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI+DLDP RWPNS WR + V WDE + Q +VS WEI+ + P
Sbjct: 314 MGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 364
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 64/94 (68%), Gaps = 2/94 (2%)
Query: 675 SPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTD 733
+P R+ KVHK GS GR++D+ + + Y++L EL +F +EG L DP + GW++++ D
Sbjct: 676 NPPTRTFVKVHKLGSF-GRSLDITKFSSYDELRGELGRMFGLEGRLEDPLRSGWQLVFVD 734
Query: 734 SENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
ENDV+++GDDPW EF N V I I + EV++M
Sbjct: 735 RENDVLLLGDDPWQEFVNNVWYIKILSPLEVQQM 768
>gi|334183431|ref|NP_001185266.1| auxin response factor 1 [Arabidopsis thaliana]
gi|332195494|gb|AEE33615.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 660
Score = 365 bits (936), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 182/386 (47%), Positives = 250/386 (64%), Gaps = 16/386 (4%)
Query: 53 LSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIF 111
LS ++ ELWHACAGPL +LP++G V YFP+GH+EQ+ AS ++P+F+L +I
Sbjct: 15 LSDALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKIL 74
Query: 112 CKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHM 171
CKV+++Q A E DEVY Q+ LLP+ L+ D V E P K T H
Sbjct: 75 CKVINIQRRAEPETDEVYAQITLLPE-----LDQSEPTSPDAPVQE------PEKCTVHS 123
Query: 172 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQ 231
FCKTLTASDTSTHGGFSV RR A+DC PPLD QQ P QELVA DLH EW FRHI+RGQ
Sbjct: 124 FCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQ 183
Query: 232 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSY 291
PRRHLLTTGWS+FVS K LV+GDA +FLRG++ ELR+G+RR ++ + +P S++S + +
Sbjct: 184 PRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMH 243
Query: 292 PNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDS 351
VL+ A+A++T ++F VFY PR + ++F++ +Y++ + +G RFKMRFE +++
Sbjct: 244 IGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEA 303
Query: 352 PERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSI 411
PE+R +G + G+ + W +S+WR L V+WDE E+VSPWE++ V+ S
Sbjct: 304 PEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSS 363
Query: 412 QSSPRMKKLRTGLQAPPPDYPVSARG 437
Q P + R PP P A G
Sbjct: 364 QPQPPQRNKRPR----PPGLPSPATG 385
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 56/96 (58%), Positives = 72/96 (75%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYT 732
SQS RSCTKVH QGS VGRAIDL R Y DL +LE +F+++G L + K W+++YT
Sbjct: 531 SQSRQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKKWQVVYT 590
Query: 733 DSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
D E+D+M+VGDDPW+EFC V KI IYT EEV+K++
Sbjct: 591 DDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLS 626
>gi|15218904|ref|NP_176184.1| auxin response factor 1 [Arabidopsis thaliana]
gi|79320256|ref|NP_001031208.1| auxin response factor 1 [Arabidopsis thaliana]
gi|46395894|sp|Q8L7G0.2|ARFA_ARATH RecName: Full=Auxin response factor 1
gi|5080809|gb|AAD39318.1|AC007258_7 auxin response factor 1 [Arabidopsis thaliana]
gi|2245378|gb|AAC49751.1| auxin response factor 1 [Arabidopsis thaliana]
gi|27754247|gb|AAO22577.1| auxin response factor 1 [Arabidopsis thaliana]
gi|222423864|dbj|BAH19896.1| AT1G59750 [Arabidopsis thaliana]
gi|332195491|gb|AEE33612.1| auxin response factor 1 [Arabidopsis thaliana]
gi|332195493|gb|AEE33614.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 665
Score = 365 bits (936), Expect = 8e-98, Method: Compositional matrix adjust.
Identities = 182/386 (47%), Positives = 250/386 (64%), Gaps = 16/386 (4%)
Query: 53 LSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIF 111
LS ++ ELWHACAGPL +LP++G V YFP+GH+EQ+ AS ++P+F+L +I
Sbjct: 15 LSDALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKIL 74
Query: 112 CKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHM 171
CKV+++Q A E DEVY Q+ LLP+ L+ D V E P K T H
Sbjct: 75 CKVINIQRRAEPETDEVYAQITLLPE-----LDQSEPTSPDAPVQE------PEKCTVHS 123
Query: 172 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQ 231
FCKTLTASDTSTHGGFSV RR A+DC PPLD QQ P QELVA DLH EW FRHI+RGQ
Sbjct: 124 FCKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQ 183
Query: 232 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSY 291
PRRHLLTTGWS+FVS K LV+GDA +FLRG++ ELR+G+RR ++ + +P S++S + +
Sbjct: 184 PRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMH 243
Query: 292 PNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDS 351
VL+ A+A++T ++F VFY PR + ++F++ +Y++ + +G RFKMRFE +++
Sbjct: 244 IGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEA 303
Query: 352 PERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSI 411
PE+R +G + G+ + W +S+WR L V+WDE E+VSPWE++ V+ S
Sbjct: 304 PEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSS 363
Query: 412 QSSPRMKKLRTGLQAPPPDYPVSARG 437
Q P + R PP P A G
Sbjct: 364 QPQPPQRNKRPR----PPGLPSPATG 385
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 56/96 (58%), Positives = 72/96 (75%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYT 732
SQS RSCTKVH QGS VGRAIDL R Y DL +LE +F+++G L + K W+++YT
Sbjct: 536 SQSRQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKKWQVVYT 595
Query: 733 DSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
D E+D+M+VGDDPW+EFC V KI IYT EEV+K++
Sbjct: 596 DDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLS 631
>gi|356501413|ref|XP_003519519.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 896
Score = 364 bits (935), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 184/351 (52%), Positives = 243/351 (69%), Gaps = 12/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA+S+ +PN+ +L PQ+ C++ +V
Sbjct: 24 ELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNREVDAHIPNYPNLPPQLICQLHNV 83
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P E Q E + E G +P+K + FCKTLT
Sbjct: 84 TMHADAETDEVYAQMTLQPLSPQE-------QKEVYLLPAELG--TPSKQPTNYFCKTLT 134
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLDY QQ P+QEL+A+DLH EW+FRHI+RGQP+RHLL
Sbjct: 135 ASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLL 194
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+VLF+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 195 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTIMPSSVLSSDSMHIGLLAA 254
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F +FY+PRA+ ++F IP KYVK + + + +G RF+M FE ++S RR
Sbjct: 255 AAHAAATNSRFTIFYNPRASPSEFAIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRY 314
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI+DLDP RWPNS WR + V WDE + Q +VS WEI+ + P
Sbjct: 315 MGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 365
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 61/89 (68%), Gaps = 4/89 (4%)
Query: 682 TKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPA---KGWRILYTDSENDV 738
KVHK GS GR++D+ + + Y++L+SEL +F +EG L DP GW++++ D ENDV
Sbjct: 763 VKVHKSGSF-GRSLDISKFSSYDELISELARMFGLEGQLEDPKTQRSGWQLVFVDRENDV 821
Query: 739 MVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
+++GDDPW EF N V I I + EV++M
Sbjct: 822 LLLGDDPWQEFVNNVWYIKILSPLEVQQM 850
>gi|301793207|emb|CBA11994.1| putative auxin response factor 6 [Amborella trichopoda]
Length = 914
Score = 364 bits (935), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 184/351 (52%), Positives = 244/351 (69%), Gaps = 13/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA+S+ +PN+ L PQ+ C++ +V
Sbjct: 23 ELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQLICQLHNV 82
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P LN + ++ L D G+ PT + FCKTLT
Sbjct: 83 TMHADVETDEVYAQMTLQP------LNPQEQKDAFLPADLGTSGKQPT----NYFCKTLT 132
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+A+DLH EW+FRHI+RGQP+RHLL
Sbjct: 133 ASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLL 192
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+VLF+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAA 252
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F +FY+PRA+ ++FVIP KYVK + + + +G RF+M FE ++S RR
Sbjct: 253 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRY 312
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI+DLDP RWPNS WR + V WDE + Q +VS WEI+ + P
Sbjct: 313 MGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 67/101 (66%), Gaps = 5/101 (4%)
Query: 671 PSSQSPGK---RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-G 726
PS ++ G+ ++ KV K GS GR++++ R + Y +L SEL +F +EG L DP + G
Sbjct: 770 PSPENVGQINPQNFVKVCKSGSF-GRSLEITRFSSYLELRSELARMFGLEGQLEDPLRSG 828
Query: 727 WRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
W+++Y D +NDV+++GDDPW +F S I I + +E+++M
Sbjct: 829 WQLIYIDRDNDVLLLGDDPWPDFVKNASCIKILSPQELQQM 869
>gi|115488556|ref|NP_001066765.1| Os12g0479400 [Oryza sativa Japonica Group]
gi|77555451|gb|ABA98247.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
Group]
gi|113649272|dbj|BAF29784.1| Os12g0479400 [Oryza sativa Japonica Group]
gi|215695057|dbj|BAG90248.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 840
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 231/638 (36%), Positives = 338/638 (52%), Gaps = 53/638 (8%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIE--VPNFDLQPQIFCKV 114
++ ELW ACAGPL ++P G V Y PQGH+EQV +S+ + P ++L +I CKV
Sbjct: 29 LFVELWRACAGPLVTVPAVGERVFYLPQGHIEQVEASTNQVAEQQGAPLYNLPWKIPCKV 88
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTP--HMF 172
++V+L A + DEVY Q+ LLP+ + +G + V+EE P H F
Sbjct: 89 MNVELKAEPDTDEVYAQLTLLPEKQ-DGNGSGNGNVSKDKVEEEEVVPPAATERPRVHSF 147
Query: 173 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQP 232
CKTLTASDTSTHGGFSV RR A++C PPLD Q P+QELVAKDLHGVEWRFRHI+RGQP
Sbjct: 148 CKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPTQELVAKDLHGVEWRFRHIFRGQP 207
Query: 233 RRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYP 292
RRHLL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++ + +P S++S + +
Sbjct: 208 RRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSMHL 267
Query: 293 NVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSP 352
VL+ +AV+T +MF V+Y PR + ++FV+P Y + + IG RFKM FE +++
Sbjct: 268 GVLATAWHAVNTGTMFTVYYKPRTSPSEFVVPRDLYKESLKRNHSIGMRFKMTFEGEEAA 327
Query: 353 ERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQ 412
E+R G + G+ D DP W +SKWR L VRWDE ++VSPW+I+ + S P++
Sbjct: 328 EQRFTGTIVGVGDSDPSGWADSKWRSLKVRWDEAASVPRPDRVSPWQIEPANSPSPVNPL 387
Query: 413 SSPRMKKLRTGLQAPPPDYPVSAR--GGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDT 470
+PR K+ R + A PD + V+ + + QEN+ S +
Sbjct: 388 PAPRTKRARPNVLASSPDLSAVNKEVASKVMANSQQNGLPRAFHSQENMNLRSRFGDSNE 447
Query: 471 VNHPLGFEMRAPAHQSLALNGIRKDNINELVRALPTSYTGFVESNRFPKVLQGQEIC--- 527
+N M + K+N++ S+ + ++L G +
Sbjct: 448 LNTSQKLTMWSSGSNQ------EKNNVSVQRELGSQSWMQMRRPDGSSEILSGFQPLKDT 501
Query: 528 --PLRSLTGKVDLNL-GTWGKPNFGCNSMNMY---QASKPNIYPPPSESLSNMFFPYGDM 581
PL S ++ N TW N++N++ Q + N+YP ++ P
Sbjct: 502 RNPLSSFPSQISGNRSNTW-------NTINVHYPDQNANHNMYP----GTWSLMPPNTGF 550
Query: 582 PKTVQHHTMPPYASNLQRE-NVKL--NSSSIQMPAIGAEIRKANLLNEHKPVENI----- 633
Q++ M P + QR N K N + + A G + R + L +P +I
Sbjct: 551 GVNQQNYLMTPDITLPQRSLNAKFGGNGAFTSLRAHGIDQRSSGWLGHIEPSSHIDDASS 610
Query: 634 ----PTP-TFKANMRSHKDGSFNGTAAGCKLFGFSLTS 666
P P N++ K S C LFG SL S
Sbjct: 611 SLIKPQPLVIDHNVQKAKGSS-------CMLFGISLDS 641
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 72/98 (73%)
Query: 674 QSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTD 733
Q+ RSC KVHKQG +GR+IDL + Y++L++EL+ +F+ G L +K W ++YTD
Sbjct: 707 QNGSSRSCKKVHKQGIALGRSIDLTKFTCYDELIAELDQMFDFNGELNSSSKNWMVVYTD 766
Query: 734 SENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGT 771
+E D+M+VGDDPW+EFCN V KI IYT+EEV+KM G
Sbjct: 767 NEGDMMLVGDDPWNEFCNMVHKIFIYTREEVQKMNPGA 804
>gi|356553218|ref|XP_003544955.1| PREDICTED: auxin response factor 8-like [Glycine max]
Length = 842
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 183/351 (52%), Positives = 244/351 (69%), Gaps = 13/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G VVYFPQGH EQVA+++ +PN+ L PQ+ C++ +V
Sbjct: 23 ELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNREVDGHIPNYPSLPPQLVCQLHNV 82
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L ++ +D + E G P+K + FCKTLT
Sbjct: 83 TMHADVETDEVYAQMTLQP--------LTPQEQKDTFLPMELG--VPSKQPSNYFCKTLT 132
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+A+DLH VEW+FRHI+RGQP+RHLL
Sbjct: 133 ASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 192
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+VLF+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAA 252
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F VFY+PRA+ ++FVIP KY+K + + + +G RF+M FE ++S RR
Sbjct: 253 AAHAAATNSCFTVFYNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRY 312
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI+DLDP RWPNS WR + V WDE + Q +VS WEI+ + P
Sbjct: 313 MGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 62/90 (68%), Gaps = 2/90 (2%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSEND 737
R+ KV+K GS VGR++D+ R + Y++L EL +F +EG L DP + GW++++ D END
Sbjct: 716 RTFVKVYKSGS-VGRSLDISRFSSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDREND 774
Query: 738 VMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
V+++GDDPW F N V I I + E++ KM
Sbjct: 775 VLLLGDDPWESFVNNVWYIKILSPEDIHKM 804
>gi|255584509|ref|XP_002532983.1| Auxin response factor, putative [Ricinus communis]
gi|223527247|gb|EEF29407.1| Auxin response factor, putative [Ricinus communis]
Length = 478
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 186/370 (50%), Positives = 250/370 (67%), Gaps = 13/370 (3%)
Query: 41 SSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PI 99
SS N + + + ELWHACAGPL SLP G+ VVYFPQGH EQVA+S+
Sbjct: 4 SSAGFNPQTQEGENRVLNSELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDA 63
Query: 100 EVPNF-DLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEE 158
+PN+ L PQ+ C++ +V + A+ E DEVY Q+ L P L ++ +D + E
Sbjct: 64 HIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQP--------LSPQEQKDAYLPAE 115
Query: 159 GGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLH 218
G +P K + FCKTLTASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+A+DLH
Sbjct: 116 LG--TPNKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLH 173
Query: 219 GVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRN 278
EW+FRHI+RGQP+RHLLTTGWS+FVS K LV+GD+VLF+ + +L LGIRR+ +P+
Sbjct: 174 DNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQT 233
Query: 279 GLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-IC 337
+P S+LS + + +L+ A+A +T S F +FY+PRA+ ++FVIP KYVK + + +
Sbjct: 234 VMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVS 293
Query: 338 IGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSP 397
+G RF+M FE ++S RR G +TGI+DLDP RWPNS WR + V WDE + Q +VS
Sbjct: 294 VGMRFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSL 353
Query: 398 WEIDRSVSLP 407
WEI+ + P
Sbjct: 354 WEIEPLTTFP 363
>gi|242085500|ref|XP_002443175.1| hypothetical protein SORBIDRAFT_08g014320 [Sorghum bicolor]
gi|241943868|gb|EES17013.1| hypothetical protein SORBIDRAFT_08g014320 [Sorghum bicolor]
Length = 839
Score = 364 bits (934), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 184/387 (47%), Positives = 255/387 (65%), Gaps = 12/387 (3%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIE--VPNFDLQPQIFCKV 114
++ ELW ACAGPL+S+P G V YFPQGH+EQV +S+ + P ++L +I CK+
Sbjct: 27 LFVELWKACAGPLSSVPPLGEKVYYFPQGHIEQVEASTNQIAEQQGTPLYNLPWKIPCKL 86
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTP--HMF 172
++++L A + DEVY Q+ LLP + + N + +E PT P H F
Sbjct: 87 MNIELKAEPDTDEVYAQLTLLPDKK-QDENTSTTVENEEAEEEVVPHAPPTNEGPRIHSF 145
Query: 173 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQP 232
CKTLTASDTSTHGGFSV RR A++C PPLD Q P+QELVAKDLHG+EWRFRHI+RGQP
Sbjct: 146 CKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGIEWRFRHIFRGQP 205
Query: 233 RRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYP 292
RRHLL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++ + +P S++S + +
Sbjct: 206 RRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHSMHL 265
Query: 293 NVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSP 352
VL+ +AV+T SMF V+Y PR + A+FV+ +Y + + IG RFKMRFE +++
Sbjct: 266 GVLATAWHAVNTGSMFTVYYKPRTSPAEFVVSRDRYYESLKRNYSIGMRFKMRFEGEEAA 325
Query: 353 ERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS---LPPL 409
E+R G + GI DP W +SKWR L VRWDE E+VSPW+I+ ++S + PL
Sbjct: 326 EQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEASSVPRPERVSPWQIEPAISPSPVNPL 385
Query: 410 SIQSSPRMKKLRTGLQAPPPDYPVSAR 436
+ R K+ R+ + A P D P +R
Sbjct: 386 PV----RFKRSRSSVNASPSDVPTVSR 408
Score = 129 bits (323), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 76/97 (78%)
Query: 674 QSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTD 733
QS RSC KVHKQGS +GR+IDL + Y++L++EL+ +F+ +G L++P K W ++YTD
Sbjct: 705 QSSSTRSCKKVHKQGSALGRSIDLTKFTCYDELIAELDQMFDFDGELKNPCKNWLVVYTD 764
Query: 734 SENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIG 770
+E D+M+VGDDPW+EFC+ V KI IYT+EEVE+M G
Sbjct: 765 NEGDIMLVGDDPWNEFCDMVHKIFIYTREEVERMNPG 801
>gi|402746980|gb|AFQ94050.1| auxin response factor 1 [Camellia sinensis]
Length = 820
Score = 363 bits (933), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 188/374 (50%), Positives = 252/374 (67%), Gaps = 17/374 (4%)
Query: 37 SSSSSSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAF 96
S+S S A+ + L+S ELWHACAGPL SLP G+ VVYFPQGH EQVA+++
Sbjct: 4 STSGLSQQAHEGENKCLNS----ELWHACAGPLVSLPTVGSRVVYFPQGHSEQVAATTNK 59
Query: 97 P-PIEVPNF-DLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLG 154
+PN+ L PQ+ C++ +V + A+ E DEVY Q+ L P L ++ +D
Sbjct: 60 EVDAHIPNYPSLPPQLICQLHNVTMHADVETDEVYAQMTLQP--------LTPQEQKDTY 111
Query: 155 VDEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVA 214
+ E G P+K + FCKTLTASDTSTHGGFSVPRRAAE FPPLD+ QQ P QEL+A
Sbjct: 112 IPVELG--IPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPCQELIA 169
Query: 215 KDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSV 274
+DLH VEW+FRHI+RGQP+RHLLTTGWS+FVS K LV+GD+VLF+ + +L LGIRR+
Sbjct: 170 RDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRAT 229
Query: 275 QPRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMN 334
+P+ +P S+LS + + +L+ A+A ST S F +FY+PRA+ ++FVIP KY+K + +
Sbjct: 230 RPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSCFTIFYNPRASPSEFVIPLSKYIKAVYH 289
Query: 335 P-ICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQE 393
+ +G RF+M FE ++S RR G +TGI DLDP RW NS WR + V WDE + Q
Sbjct: 290 TRVSVGMRFRMLFETEESSVRRYMGTITGIGDLDPIRWANSHWRSVKVGWDESTAGERQP 349
Query: 394 QVSPWEIDRSVSLP 407
+VS WEI+ + P
Sbjct: 350 RVSLWEIEPLTTFP 363
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 122/241 (50%), Gaps = 29/241 (12%)
Query: 539 NLGTWGKPN-FGCNSMNMYQASKPNIYPPPSESLSNMFFPYGDMPKTVQHHTMPPYA--- 594
+L T G N F +S S+P+ P S+ F + + + ++ PY
Sbjct: 576 SLSTDGSANLFNFSSTGQSMVSEPSQQPWVSK------FTHSQVNPSANSVSLTPYPGKD 629
Query: 595 SNLQRENVKLNSSSIQMPAIGAEIRKANLLNEHKPVENIPTPTFKANMRSHKDGS--FNG 652
+ +++EN L+ + + GA I LL + +I T + A++ S G+ F
Sbjct: 630 TAVEQENCSLDGQNHAL--FGANIDPGLLLP--TTLSSIGTSSVNADVSSMPLGASGFQS 685
Query: 653 TAAGC-----KLFGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLL 707
+ GC +L + + PT R+ KV+K GS VGR++D+ R + YN+L
Sbjct: 686 SLYGCMQDSSELLHSAAQVDPPT------ANRTFVKVYKSGS-VGRSLDISRFSSYNELR 738
Query: 708 SELEHLFNMEGLLRDPAK-GWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEK 766
EL +F +EGLL+DP + GW++++ D E+DV+++GD PW F N V I I + E+V K
Sbjct: 739 EELGQMFGIEGLLKDPQRSGWQLVFVDREDDVLLLGDGPWEAFVNNVWYIKILSPEDVLK 798
Query: 767 M 767
+
Sbjct: 799 L 799
>gi|356554039|ref|XP_003545357.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 866
Score = 363 bits (933), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 185/352 (52%), Positives = 245/352 (69%), Gaps = 14/352 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA+S+ +PN+ +L PQ+ C++ +V
Sbjct: 24 ELWHACAGPLVSLPLVGSRVVYFPQGHSEQVAASTNREVDAHIPNYPNLPPQLICQLHNV 83
Query: 118 QLLANKENDEVYTQVALLP-QPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTL 176
+ A+ E DEVY Q+ L P P+ E K++ L + G+ PT + FCKTL
Sbjct: 84 TMHADAETDEVYAQMTLQPLSPQ------EQKEVYLLPAELGTPGKQPT----NYFCKTL 133
Query: 177 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHL 236
TASDTSTHGGFSVPRRAAE FPPLDY QQ P+QEL+A+DLH EW+FRHI+RGQP+RHL
Sbjct: 134 TASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHL 193
Query: 237 LTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLS 296
LTTGWS+FVS K LV+GD+VLF+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 194 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTIMPSSVLSSDSMHIGLLA 253
Query: 297 VVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERR 355
A+A +T S F +FY+PRA+ ++FVIP KYVK + + I +G RF+M FE ++S R
Sbjct: 254 AAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVPR 313
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI+DLDP RWPNS WR + V WDE + Q +VS WEI+ + P
Sbjct: 314 YMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 365
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 64/97 (65%), Gaps = 4/97 (4%)
Query: 682 TKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPA---KGWRILYTDSENDV 738
KVHK GS GR++D+ + + Y++L+SEL +F +EG L DP GW++++ D ENDV
Sbjct: 763 VKVHKSGSF-GRSLDISKFSSYDELISELARMFGLEGQLEDPKTQRSGWQLVFVDRENDV 821
Query: 739 MVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGTTDDT 775
+++GDDPW EF N V I I + EV++M G + T
Sbjct: 822 LLLGDDPWQEFVNNVWYIKILSPLEVQQMGKGLSPST 858
>gi|356539752|ref|XP_003538358.1| PREDICTED: auxin response factor 8-like [Glycine max]
Length = 843
Score = 363 bits (933), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 183/351 (52%), Positives = 243/351 (69%), Gaps = 13/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G VVYFPQGH EQVA+++ +PN+ L PQ+ C++ ++
Sbjct: 23 ELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNREIDGHIPNYPSLPPQLICQLHNI 82
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L ++ +D + E G P+K + FCKTLT
Sbjct: 83 TMHADVETDEVYAQMTLQP--------LTPQEQKDTFLPMELG--IPSKQPSNYFCKTLT 132
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+A+DLH VEW+FRHI+RGQP+RHLL
Sbjct: 133 ASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 192
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWSIFVS K LV+GD+VLF+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 193 TTGWSIFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAA 252
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F VFY+PRA+ ++FVIP KY+K + + I +G RF+M FE ++S RR
Sbjct: 253 AAHAAATNSCFTVFYNPRASPSEFVIPLSKYIKAVYHTRISVGMRFRMLFETEESSVRRY 312
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI+DLD RWPNS WR + V WDE + Q +VS WEI+ + P
Sbjct: 313 MGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 76/124 (61%), Gaps = 7/124 (5%)
Query: 647 DGSFNGTAAGCKLFGFSL--TSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYN 704
+ F G+ GC L ++ P +Q+ ++ KV+K GS VGR++D+ R + Y+
Sbjct: 686 ESGFQGSLYGCMQDSSELLQSAGHTDPENQT---QTFVKVYKSGS-VGRSLDISRFSSYH 741
Query: 705 DLLSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEE 763
+L EL +F +EG L DP + GW++++ D ENDV+++GDDPW F N V I I + E+
Sbjct: 742 ELREELAQMFGIEGKLEDPLRSGWQLVFVDRENDVLLLGDDPWESFVNNVWYIKILSPED 801
Query: 764 VEKM 767
++KM
Sbjct: 802 IQKM 805
>gi|297742361|emb|CBI34510.3| unnamed protein product [Vitis vinifera]
Length = 682
Score = 363 bits (933), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 177/360 (49%), Positives = 238/360 (66%), Gaps = 29/360 (8%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKVV 115
+Y ELW ACAGPL +P++G V YFPQGH+EQ+ AS++ +P F+L +I C+V+
Sbjct: 12 LYAELWKACAGPLVDVPRRGERVFYFPQGHVEQLEASTNQELSQRIPLFNLPSKILCRVI 71
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTP------ 169
+QL A +E DEVY Q+ LLP+P+ + RSP TP
Sbjct: 72 HIQLRAEQETDEVYAQITLLPEPD------------------QAEPRSPDPCTPEPPRPT 113
Query: 170 -HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIY 228
H FCK LTASDTSTHGGFSV R+ A +C P LD Q P+QELVAKDLHG EWRF+HI+
Sbjct: 114 VHSFCKVLTASDTSTHGGFSVLRKHANECLPQLDMNQATPTQELVAKDLHGYEWRFKHIF 173
Query: 229 RGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQ 288
RGQPRRHLLTTGWS FV+ K LV+GD+ +FLRG +GELR+G+RR + ++ +P S++S Q
Sbjct: 174 RGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGDNGELRVGVRRLARQQSTMPTSVISSQ 233
Query: 289 NSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEM 348
+ + VL+ ++AV+T+++F V+Y PR + F+I KY++ + N +G RFKMRFE
Sbjct: 234 SMHLGVLATASHAVATQTLFIVYYKPRTSQ--FIIGLNKYLEAVSNGFAVGMRFKMRFEG 291
Query: 349 DDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPP 408
+DSPERR +G + G D P W +S+WR L V+WDE E+VSPWEI+ VS P
Sbjct: 292 EDSPERRFSGTIVGGEDFSP-EWKDSEWRSLKVQWDEPASIPRPEKVSPWEIEHYVSSVP 350
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 67/93 (72%), Gaps = 1/93 (1%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDV 738
RS TKV QG VGRA+DL L GY++L+ ELE +F ++G LR P W I++TD E D+
Sbjct: 570 RSRTKVQMQGIAVGRAVDLTALEGYDELIDELEEMFEIKGELR-PRYKWEIVFTDDEGDM 628
Query: 739 MVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGT 771
M+VGDDPW EFCN V +I I + ++V+KM+ G+
Sbjct: 629 MLVGDDPWPEFCNMVRRIFICSSQDVKKMSPGS 661
>gi|357123410|ref|XP_003563403.1| PREDICTED: auxin response factor 17-like [Brachypodium distachyon]
Length = 907
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 187/352 (53%), Positives = 243/352 (69%), Gaps = 15/352 (4%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIE--VPNF-DLQPQIFCKVVD 116
ELWHACAGPL SLP G+ VVYFPQGH EQVA+S+ IE +PN+ +L PQ+ C++ +
Sbjct: 31 ELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTN-KEIESQIPNYPNLPPQLICQLHN 89
Query: 117 VQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTL 176
V + A+ E DEVY Q+ L P L ++L+D + E G + K + FCKTL
Sbjct: 90 VTMNADPETDEVYAQMTLQP--------LNPQELKDPYLPAELG--TANKQPTNYFCKTL 139
Query: 177 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHL 236
TASDTSTHGGFSVPRRAAE FPPLD+ Q P+QEL AKDLHG EW+FRHI+RGQP+RHL
Sbjct: 140 TASDTSTHGGFSVPRRAAEKVFPPLDFTLQPPAQELFAKDLHGNEWKFRHIFRGQPKRHL 199
Query: 237 LTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLS 296
LTTGWS+FVS K LV+GD+VLF+ +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 200 LTTGWSVFVSAKRLVAGDSVLFIWNDSNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLA 259
Query: 297 VVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERR 355
A+A ST S F +FY+PRA+ +FVIP KYVK + + I +G RF+M FE ++S RR
Sbjct: 260 AAAHAASTNSRFTIFYNPRASPCEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRR 319
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI+DLD RWPNS WR + V WDE + Q +VS WEI+ + P
Sbjct: 320 YMGTITGISDLDAVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 371
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 82/148 (55%), Gaps = 7/148 (4%)
Query: 624 LNEHKPVENIPTPTFKANMRSHKDGSFNGT--AAGC-KLFGFSLTSETPTPSSQSPGKRS 680
L++ IP T S D S + T + GC G+ S P +Q P +
Sbjct: 719 LHDENDSTTIPYSTSNFLSPSQNDFSLDQTLNSPGCLDESGYVPCSHNPNQGNQPPA--T 776
Query: 681 CTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSENDVM 739
KV+K G+ GR++D+ R + Y++L EL LF +EG L DP + GW++++ D E DV+
Sbjct: 777 FVKVYKSGT-YGRSLDITRFSSYHELRRELGRLFGLEGQLEDPLRSGWQLVFVDREEDVL 835
Query: 740 VVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
+VGDDPW EF N V I I + +EV++M
Sbjct: 836 LVGDDPWQEFVNSVFCIKILSPQEVQQM 863
>gi|357152661|ref|XP_003576194.1| PREDICTED: auxin response factor 24-like [Brachypodium distachyon]
Length = 813
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 241/632 (38%), Positives = 344/632 (54%), Gaps = 55/632 (8%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIE--VPNFDLQPQIFCKV 114
+Y ELW ACAGPL S+P G V YFPQGH+EQV +S+ + P ++L +I CKV
Sbjct: 20 LYAELWKACAGPLVSVPAVGERVFYFPQGHIEQVEASTNQVAEQQGAPLYNLPWKIPCKV 79
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPT---KSTPHM 171
++V+L A ++ DEVY Q+ LLP+ + E + E G EE P + H
Sbjct: 80 MNVELKAEQDTDEVYAQLTLLPEKQNEHASTE-------GEKEEVPAAVPAVHERPRVHS 132
Query: 172 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQ 231
FCKTLTASDTSTHGGFSV RR A++C PPLD Q P+QEL+ +DLHGVEWRFRHI+RGQ
Sbjct: 133 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQNPPTQELMTRDLHGVEWRFRHIFRGQ 192
Query: 232 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSY 291
P+RHLL +GWS+FVS K LV+ DA +FLRG++GELR+G+RR+++ + +P S++S + +
Sbjct: 193 PKRHLLQSGWSVFVSNKRLVARDAFIFLRGENGELRVGVRRAMRQQANIPSSVISSHSMH 252
Query: 292 PNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDS 351
VL+ +AV+T SMF V+Y PR + A+FV+P Y + + IG RFKMRFE +++
Sbjct: 253 LGVLATAWHAVNTGSMFTVYYKPRTSPAEFVVPCDLYYESMKRNHSIGMRFKMRFEGEEA 312
Query: 352 PERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSI 411
E+R G + GI D DP W +SKWR L VRWDE ++VSPW+I+ +VS PLS+
Sbjct: 313 AEQRFTGTIVGIGDSDPSGWADSKWRSLKVRWDEASSVPRPDRVSPWQIEPAVS--PLSV 370
Query: 412 Q--SSPRMKKLRTGLQAPPPDY-PVSAR-GGGVLDFEESVRSSKVLQGQENVGFVSPLYG 467
+PR K+ R A P+ PV+ V + + LQ QE+ S +G
Sbjct: 371 NPLQAPRNKRSRPNAIASSPELSPVNREVSSKVTANSQHNGLPRALQRQESETSTS-RFG 429
Query: 468 CDTVNHPLGFEMR-APAHQSLALNGIRKDNINELVRALPTSYTGFVESNRFPKVLQGQEI 526
+ V P M + Q + +++ + + P YT V +RF + Q
Sbjct: 430 DNNVKTPGKLTMWPSRTDQEKSNITVQRSSEGWMQMQRPEGYTNIV--SRFQPLKDAQN- 486
Query: 527 CPLRSLTGKVDLNL-GTWGKPNFGCNSMNMYQASKPNIYPPPSESLSNMFFP--YGDMPK 583
P S ++ N TW N +N++ P + ++ FP + MP
Sbjct: 487 -PPCSFPSQISGNCSNTW-------NIVNVHY---------PDQQVNRNTFPGTWSCMPP 529
Query: 584 TV-----QHHTM--PPYASNLQRENVKL--NSSSIQMPAIGAEIRKANLLNEHKPVENIP 634
QH+ + P A + + EN K N + A G + R +P +I
Sbjct: 530 NSGFGVNQHNYLMTPDRAPSQRAENAKFSWNGDFTSVQARGIDERSLGWFEHAEPNPHID 589
Query: 635 TPTFKANMRSHKDGSFNGTAAG--CKLFGFSL 664
+ + ++SH G G G C LFGF L
Sbjct: 590 DAS-SSVIKSHPLGHALGKTKGSPCMLFGFPL 620
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 77/111 (69%), Gaps = 5/111 (4%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDV 738
RSC KVHKQG +GR++DL R Y++L++EL+ +F+ G L+ + W ++YTDS+ND+
Sbjct: 701 RSCKKVHKQGIALGRSVDLTRFTCYDELIAELDRMFDFGGELKGSCENWMVVYTDSDNDM 760
Query: 739 MVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIG-----TTDDTQSCLDQAPV 784
M+VGDDPW+EFC+ V KI IYT+EEV KM G + D + LD+ V
Sbjct: 761 MLVGDDPWNEFCDVVHKIFIYTREEVSKMNPGALVSRSEDSLSASLDRGVV 811
>gi|359473930|ref|XP_002265162.2| PREDICTED: auxin response factor 9-like [Vitis vinifera]
Length = 693
Score = 363 bits (932), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 177/360 (49%), Positives = 238/360 (66%), Gaps = 29/360 (8%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKVV 115
+Y ELW ACAGPL +P++G V YFPQGH+EQ+ AS++ +P F+L +I C+V+
Sbjct: 12 LYAELWKACAGPLVDVPRRGERVFYFPQGHVEQLEASTNQELSQRIPLFNLPSKILCRVI 71
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTP------ 169
+QL A +E DEVY Q+ LLP+P+ + RSP TP
Sbjct: 72 HIQLRAEQETDEVYAQITLLPEPD------------------QAEPRSPDPCTPEPPRPT 113
Query: 170 -HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIY 228
H FCK LTASDTSTHGGFSV R+ A +C P LD Q P+QELVAKDLHG EWRF+HI+
Sbjct: 114 VHSFCKVLTASDTSTHGGFSVLRKHANECLPQLDMNQATPTQELVAKDLHGYEWRFKHIF 173
Query: 229 RGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQ 288
RGQPRRHLLTTGWS FV+ K LV+GD+ +FLRG +GELR+G+RR + ++ +P S++S Q
Sbjct: 174 RGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGDNGELRVGVRRLARQQSTMPTSVISSQ 233
Query: 289 NSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEM 348
+ + VL+ ++AV+T+++F V+Y PR + F+I KY++ + N +G RFKMRFE
Sbjct: 234 SMHLGVLATASHAVATQTLFIVYYKPRTSQ--FIIGLNKYLEAVSNGFAVGMRFKMRFEG 291
Query: 349 DDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPP 408
+DSPERR +G + G D P W +S+WR L V+WDE E+VSPWEI+ VS P
Sbjct: 292 EDSPERRFSGTIVGGEDFSP-EWKDSEWRSLKVQWDEPASIPRPEKVSPWEIEHYVSSVP 350
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 67/93 (72%), Gaps = 1/93 (1%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDV 738
RS TKV QG VGRA+DL L GY++L+ ELE +F ++G LR P W I++TD E D+
Sbjct: 581 RSRTKVQMQGIAVGRAVDLTALEGYDELIDELEEMFEIKGELR-PRYKWEIVFTDDEGDM 639
Query: 739 MVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGT 771
M+VGDDPW EFCN V +I I + ++V+KM+ G+
Sbjct: 640 MLVGDDPWPEFCNMVRRIFICSSQDVKKMSPGS 672
>gi|357447187|ref|XP_003593869.1| Auxin response factor [Medicago truncatula]
gi|355482917|gb|AES64120.1| Auxin response factor [Medicago truncatula]
Length = 908
Score = 363 bits (931), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 182/351 (51%), Positives = 244/351 (69%), Gaps = 13/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVA-SSSAFPPIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA S++ +PN+ L PQ+ C++ ++
Sbjct: 23 ELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVDAHIPNYPSLPPQLICQLHNL 82
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L A++ ++ + E G +P+K + FCKTLT
Sbjct: 83 TMHADVETDEVYAQMTLQP--------LNAQEQKEAYLPAELG--TPSKQPTNYFCKTLT 132
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+A+DLHG EW+FRHI+RGQP+RHLL
Sbjct: 133 ASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLL 192
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+VLF+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHLGLLAA 252
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F +FY+PRA ++FVIP KYVK + + + +G RF+M FE ++S RR
Sbjct: 253 AAHAAATNSRFTIFYNPRACPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRY 312
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI DLD RWPNS WR + V WDE + Q +VS WEI+ + P
Sbjct: 313 MGTITGICDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 73/123 (59%), Gaps = 4/123 (3%)
Query: 647 DGSFN-GTAAGCKLFGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYND 705
D S N G GF T E +P ++ KV+K GS GR++D+ + + YN+
Sbjct: 743 DSSLNHGVTPSIGESGFLHTQEN-GEQGNNPLNKTFVKVYKSGSF-GRSLDITKFSSYNE 800
Query: 706 LLSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEV 764
L SEL +F +EG L DP + GW++++ D ENDV+++GD PW EF N V I I + EEV
Sbjct: 801 LRSELARMFGLEGELEDPVRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPEEV 860
Query: 765 EKM 767
++M
Sbjct: 861 QQM 863
>gi|356500980|ref|XP_003519308.1| PREDICTED: auxin response factor 8-like [Glycine max]
Length = 846
Score = 363 bits (931), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 182/351 (51%), Positives = 243/351 (69%), Gaps = 13/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G V YFPQGH EQVA+++ +PN+ L PQ+ C++ +V
Sbjct: 23 ELWHACAGPLVSLPTAGTRVAYFPQGHSEQVAATTNREVDGHIPNYPSLPPQLICQLHNV 82
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L ++ +D + E G P+K + FCKTLT
Sbjct: 83 TMHADVETDEVYAQMTLQP--------LTPQEQKDTFLPMELG--VPSKQPSNYFCKTLT 132
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+A+DLH VEW+FRHI+RGQP+RHLL
Sbjct: 133 ASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 192
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+VLF+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAA 252
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F VFY+PRA+ ++FVIP KY+K + + + +G RF+M FE ++S RR
Sbjct: 253 AAHAAATNSCFTVFYNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRY 312
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI+DLDP RWPNS WR + V WDE + Q +VS WEI+ + P
Sbjct: 313 MGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 62/90 (68%), Gaps = 2/90 (2%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSEND 737
R+ KV+K GS VGR++D+ R + Y++L EL +F +EG L DP + GW++++ D END
Sbjct: 720 RTFVKVYKSGS-VGRSLDISRFSSYHELREELAQMFGIEGKLEDPLRSGWQLVFVDREND 778
Query: 738 VMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
V+++GDDPW F N V I I + E++ KM
Sbjct: 779 VLLLGDDPWESFVNNVWYIKILSPEDIHKM 808
>gi|356549132|ref|XP_003542951.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 895
Score = 362 bits (930), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 182/351 (51%), Positives = 245/351 (69%), Gaps = 13/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVA-SSSAFPPIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA S++ +PN+ L PQ+ C++ ++
Sbjct: 23 ELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVDAHIPNYPSLPPQLICQLHNM 82
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L ++ ++ + E G +P+K + FCKTLT
Sbjct: 83 TMHADAETDEVYAQMTLQP--------LNPQEQKEAYLPAELG--TPSKQPTNYFCKTLT 132
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+A+DLHG EW+FRHI+RGQP+RHLL
Sbjct: 133 ASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLL 192
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+VLF+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAA 252
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F +FY+PRA+ ++FVIP KYVK + + + +G RF+M FE ++S RR
Sbjct: 253 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRY 312
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI+DLDP RW NS WR + V WDE D Q +VS WEI+ + P
Sbjct: 313 MGTITGISDLDPVRWQNSHWRSVKVGWDESTAGDRQPRVSLWEIEPLTTFP 363
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 64/94 (68%), Gaps = 2/94 (2%)
Query: 675 SPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTD 733
+P ++ KV+K GS GR++D+ + + Y++L EL +F +EG L DP + GW++++ D
Sbjct: 758 NPLNKTFVKVYKSGSF-GRSLDITKFSSYHELRGELARMFGLEGELEDPVRSGWQLVFVD 816
Query: 734 SENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
ENDV+++GD PW EF N V I I + +EV++M
Sbjct: 817 RENDVLLLGDGPWPEFVNSVWCIKILSPQEVQQM 850
>gi|225443952|ref|XP_002279808.1| PREDICTED: auxin response factor 6-like [Vitis vinifera]
Length = 908
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 182/351 (51%), Positives = 243/351 (69%), Gaps = 13/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA+S+ +PN+ L PQ+ C++ +V
Sbjct: 23 ELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQLICQLHNV 82
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L ++ +D + E G P+K + FCKTLT
Sbjct: 83 TMHADVETDEVYAQMTLQP--------LSPQEQKDAYLPAELG--VPSKQPSNYFCKTLT 132
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+A+DLH EW+FRHI+RGQP+RHLL
Sbjct: 133 ASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLL 192
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+VLF+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAA 252
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F +FY+PRA+ ++FVIP KY K + + + +G RF+M FE ++S RR
Sbjct: 253 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYAKAVYHTRVSVGMRFRMLFETEESSVRRY 312
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI+DLDP RWPNS WR + V WDE + Q +VS WEI+ + P
Sbjct: 313 MGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 64/93 (68%), Gaps = 2/93 (2%)
Query: 676 PGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDS 734
P R+ KV+K GS GR++D+ + + Y++L EL +F +EG L DP + GW++++ D
Sbjct: 772 PPTRTFVKVYKSGSF-GRSLDITKFSSYHELRGELARMFGLEGQLEDPRRSGWQLVFVDR 830
Query: 735 ENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
ENDV+++GDDPW EF N V I I + +EV++M
Sbjct: 831 ENDVLLLGDDPWPEFVNSVWCIKILSLQEVQQM 863
>gi|79318949|ref|NP_001031115.1| auxin response factor 6 [Arabidopsis thaliana]
gi|238054274|sp|Q9ZTX8.2|ARFF_ARATH RecName: Full=Auxin response factor 6
gi|49616351|gb|AAT67072.1| ARF6 [Arabidopsis thaliana]
gi|332193086|gb|AEE31207.1| auxin response factor 6 [Arabidopsis thaliana]
Length = 935
Score = 362 bits (929), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 183/351 (52%), Positives = 242/351 (68%), Gaps = 13/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA+S+ +PN+ L PQ+ C++ +V
Sbjct: 25 ELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLHPQLICQLHNV 84
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L A++ +D + E G P++ + FCKTLT
Sbjct: 85 TMHADVETDEVYAQMTLQP--------LNAQEQKDPYLPAELG--VPSRQPTNYFCKTLT 134
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLDY QQ P+QEL+A+DLH EW+FRHI+RGQP+RHLL
Sbjct: 135 ASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLL 194
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+VLF+ +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 195 TTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAA 254
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F +FY+PRA+ ++FVIP KYVK + + + +G RF+M FE ++S RR
Sbjct: 255 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRY 314
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI DLDP RW NS WR + V WDE + Q +VS WEI+ + P
Sbjct: 315 MGTITGICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 365
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 92/167 (55%), Gaps = 6/167 (3%)
Query: 602 VKLNSSSIQMPAIGAEIRKANLLNEHKPVENIPTPTFKANMRSHKDGSFNGTAAGCKLFG 661
V ++SSS+ MP + +R + + ++ P +N + G+ T +
Sbjct: 723 VNIDSSSLLMPNGMSNLRSIGI----EGGDSTTLPFTSSNFNNDFSGNLAMTTPSSCIDE 778
Query: 662 FSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLR 721
+ S++P + KV+K GS GR++D+ + + Y++L SEL +F +EG L
Sbjct: 779 SGFLQSSENLGSENPQSNTFVKVYKSGSF-GRSLDISKFSSYHELRSELARMFGLEGQLE 837
Query: 722 DPAK-GWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
DP + GW++++ D ENDV+++GDDPW EF + V I I + +EV++M
Sbjct: 838 DPVRSGWQLVFVDRENDVLLLGDDPWPEFVSSVWCIKILSPQEVQQM 884
>gi|15220728|ref|NP_174323.1| auxin response factor 6 [Arabidopsis thaliana]
gi|12322119|gb|AAG51093.1|AC025295_1 auxin response factor 6 (ARF6) [Arabidopsis thaliana]
gi|4102600|gb|AAD01513.1| ARF6 [Arabidopsis thaliana]
gi|332193085|gb|AEE31206.1| auxin response factor 6 [Arabidopsis thaliana]
Length = 933
Score = 362 bits (929), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 183/351 (52%), Positives = 242/351 (68%), Gaps = 13/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA+S+ +PN+ L PQ+ C++ +V
Sbjct: 23 ELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLHPQLICQLHNV 82
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L A++ +D + E G P++ + FCKTLT
Sbjct: 83 TMHADVETDEVYAQMTLQP--------LNAQEQKDPYLPAELG--VPSRQPTNYFCKTLT 132
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLDY QQ P+QEL+A+DLH EW+FRHI+RGQP+RHLL
Sbjct: 133 ASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLL 192
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+VLF+ +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 193 TTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAA 252
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F +FY+PRA+ ++FVIP KYVK + + + +G RF+M FE ++S RR
Sbjct: 253 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRY 312
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI DLDP RW NS WR + V WDE + Q +VS WEI+ + P
Sbjct: 313 MGTITGICDLDPTRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 92/167 (55%), Gaps = 6/167 (3%)
Query: 602 VKLNSSSIQMPAIGAEIRKANLLNEHKPVENIPTPTFKANMRSHKDGSFNGTAAGCKLFG 661
V ++SSS+ MP + +R + + ++ P +N + G+ T +
Sbjct: 721 VNIDSSSLLMPNGMSNLRSIGI----EGGDSTTLPFTSSNFNNDFSGNLAMTTPSSCIDE 776
Query: 662 FSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLR 721
+ S++P + KV+K GS GR++D+ + + Y++L SEL +F +EG L
Sbjct: 777 SGFLQSSENLGSENPQSNTFVKVYKSGSF-GRSLDISKFSSYHELRSELARMFGLEGQLE 835
Query: 722 DPAK-GWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
DP + GW++++ D ENDV+++GDDPW EF + V I I + +EV++M
Sbjct: 836 DPVRSGWQLVFVDRENDVLLLGDDPWPEFVSSVWCIKILSPQEVQQM 882
>gi|22136676|gb|AAM91657.1| auxin response factor 1 [Arabidopsis thaliana]
Length = 662
Score = 362 bits (928), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 181/386 (46%), Positives = 249/386 (64%), Gaps = 16/386 (4%)
Query: 53 LSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIF 111
LS ++ ELWHACAGPL +LP++G V YFP+GH+EQ+ AS ++P+F+L +I
Sbjct: 15 LSDALCRELWHACAGPLVTLPREGERVYYFPEGHMEQLEASMHQGLEQQMPSFNLPSKIL 74
Query: 112 CKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHM 171
CKV+++Q A E DEVY Q+ LLP+ L+ D V E P K T H
Sbjct: 75 CKVINIQRRAEPETDEVYAQITLLPE-----LDQSEPTSPDAPVQE------PEKCTVHS 123
Query: 172 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQ 231
FCKTLTASDTST GGFSV RR A+DC PPLD QQ P QELVA DLH EW FRHI+RGQ
Sbjct: 124 FCKTLTASDTSTQGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHNSEWHFRHIFRGQ 183
Query: 232 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSY 291
PRRHLLTTGWS+FVS K LV+GDA +FLRG++ ELR+G+RR ++ + +P S++S + +
Sbjct: 184 PRRHLLTTGWSVFVSSKKLVAGDAFIFLRGENEELRVGVRRHMRQQTNIPSSVISSHSMH 243
Query: 292 PNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDS 351
VL+ A+A++T ++F VFY PR + ++F++ +Y++ + +G RFKMRFE +++
Sbjct: 244 IGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQKLSVGMRFKMRFEGEEA 303
Query: 352 PERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSI 411
PE+R +G + G+ + W +S+WR L V+WDE E+VSPWE++ V+ S
Sbjct: 304 PEKRFSGTIVGVQENKSSVWHDSEWRSLKVQWDEPSSVFRPERVSPWELEPLVANSTPSS 363
Query: 412 QSSPRMKKLRTGLQAPPPDYPVSARG 437
Q P + R PP P A G
Sbjct: 364 QPQPPQRNKRPR----PPGLPSPATG 385
Score = 122 bits (306), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 56/96 (58%), Positives = 72/96 (75%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYT 732
SQS RSCTKVH QGS VGRAIDL R Y DL +LE +F+++G L + K W+++YT
Sbjct: 533 SQSRQIRSCTKVHMQGSAVGRAIDLTRSECYEDLFKKLEEMFDIKGELLESTKKWQVVYT 592
Query: 733 DSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
D E+D+M+VGDDPW+EFC V KI IYT EEV+K++
Sbjct: 593 DDEDDMMMVGDDPWNEFCGMVRKIFIYTPEEVKKLS 628
>gi|449466121|ref|XP_004150775.1| PREDICTED: auxin response factor 6-like [Cucumis sativus]
Length = 899
Score = 362 bits (928), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 180/351 (51%), Positives = 246/351 (70%), Gaps = 13/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA+S+ ++PN+ L PQ+ C++ ++
Sbjct: 23 ELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNREVDAQIPNYPSLPPQLICQLHNL 82
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L A++L++ + E G +P++ + FCKTLT
Sbjct: 83 TMHADAETDEVYAQMTLQP--------LSAQELKEAYLPAELG--TPSRQPTNYFCKTLT 132
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ Q P+QEL+A+DLH EW+FRHI+RGQP+RHLL
Sbjct: 133 ASDTSTHGGFSVPRRAAEKVFPPLDFSMQPPAQELIARDLHDNEWKFRHIFRGQPKRHLL 192
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GDAVLF+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 193 TTGWSVFVSAKRLVAGDAVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHLGLLAA 252
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F +F++PRA+ ++FVIP KYVK + + + +G RF+M FE ++S RR
Sbjct: 253 AAHAAATISRFTIFFNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRY 312
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI+DLDP RW NS WR + V WDE + Q +VS WEI+ + P
Sbjct: 313 MGTITGISDLDPVRWQNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 60/93 (64%), Gaps = 2/93 (2%)
Query: 676 PGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDS 734
P + KVHK G+ R++D+ + N Y +L SEL +F +EG L DP + GW++++ D
Sbjct: 763 PPNGTFVKVHKSGT-YSRSLDITKFNSYPELRSELARMFGLEGELEDPLRSGWQLVFVDR 821
Query: 735 ENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
ENDV+++GD PW EF N V I I + EEV+ M
Sbjct: 822 ENDVLLLGDGPWPEFVNSVWCIKILSPEEVQDM 854
>gi|356555494|ref|XP_003546066.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 897
Score = 362 bits (928), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 182/351 (51%), Positives = 242/351 (68%), Gaps = 13/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVA-SSSAFPPIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA S++ +PN+ L PQ+ C++ ++
Sbjct: 23 ELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNKEVDAHIPNYPSLPPQLICQLHNM 82
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P LN + + L + + PT + FCKTLT
Sbjct: 83 TMHADVETDEVYAQMTLQP------LNPQEQNEAYLPAELGTASKQPT----NYFCKTLT 132
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+A+DLHG EW+FRHI+RGQP+RHLL
Sbjct: 133 ASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHGNEWKFRHIFRGQPKRHLL 192
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+VLF+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAA 252
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F +FY+PRA+ ++FVIP KYVK + + + +G RF+M FE ++S RR
Sbjct: 253 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRY 312
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI DLDP RWPNS WR + V WDE + Q +VS WEI+ + P
Sbjct: 313 MGTITGIGDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 64/94 (68%), Gaps = 2/94 (2%)
Query: 675 SPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTD 733
+P ++ KV+K GS GR++D+ + + Y++L EL +F +EG L DP + GW++++ D
Sbjct: 760 NPLNKTFVKVYKSGSF-GRSLDITKFSSYHELRGELARMFGLEGELEDPVRSGWQLVFVD 818
Query: 734 SENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
ENDV+++GD PW EF N V I I + +EV++M
Sbjct: 819 RENDVLLLGDGPWPEFVNSVWCIKILSPQEVQQM 852
>gi|297851462|ref|XP_002893612.1| hypothetical protein ARALYDRAFT_473256 [Arabidopsis lyrata subsp.
lyrata]
gi|297339454|gb|EFH69871.1| hypothetical protein ARALYDRAFT_473256 [Arabidopsis lyrata subsp.
lyrata]
Length = 891
Score = 362 bits (928), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 183/351 (52%), Positives = 242/351 (68%), Gaps = 13/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA+S+ +PN+ L PQ+ C++ +V
Sbjct: 25 ELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLHPQLICQLHNV 84
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L A++ +D + E G P++ + FCKTLT
Sbjct: 85 TMHADVETDEVYAQMTLQP--------LNAQEQKDPYLPAELG--VPSRQPTNYFCKTLT 134
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLDY QQ P+QEL+A+DLH EW+FRHI+RGQP+RHLL
Sbjct: 135 ASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLL 194
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+VLF+ +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 195 TTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAA 254
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F +FY+PRA+ ++FVIP KYVK + + + +G RF+M FE ++S RR
Sbjct: 255 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRY 314
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI DLDP RW NS WR + V WDE + Q +VS WEI+ + P
Sbjct: 315 MGTITGICDLDPSRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 365
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 92/167 (55%), Gaps = 6/167 (3%)
Query: 602 VKLNSSSIQMPAIGAEIRKANLLNEHKPVENIPTPTFKANMRSHKDGSFNGTAAGCKLFG 661
V ++SSS+ MP + +R + + ++ P +N + G+ T +
Sbjct: 679 VNIDSSSLLMPNGMSNLRSIGI----EGGDSTALPFTSSNFNNDFSGNLAMTTPSSCIDE 734
Query: 662 FSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLR 721
+ +++P + KV+K GS GR++D+ + + Y++L SEL +F +EG L
Sbjct: 735 SGFLQSSENLGTENPQSNTFVKVYKSGSF-GRSLDISKFSSYHELRSELARMFGLEGQLE 793
Query: 722 DPAK-GWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
DP + GW++++ D ENDV+++GDDPW EF + V I I + +EV++M
Sbjct: 794 DPVRSGWQLVFVDRENDVLLLGDDPWPEFVSSVWCIKILSPQEVQQM 840
>gi|357491655|ref|XP_003616115.1| Auxin response factor [Medicago truncatula]
gi|355517450|gb|AES99073.1| Auxin response factor [Medicago truncatula]
Length = 841
Score = 361 bits (927), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 180/351 (51%), Positives = 244/351 (69%), Gaps = 13/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G VVYFPQGH EQV A+++ ++PN+ L PQ+ C++ +V
Sbjct: 24 ELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREIDGQIPNYPSLPPQLICQLHNV 83
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L ++ +D + E G P+K + FCKTLT
Sbjct: 84 TMHADVETDEVYAQMTLQP--------LTPQEQKDTFLPMELG--IPSKQPTNYFCKTLT 133
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+A+DLH VEW+FRHI+RGQP+RHLL
Sbjct: 134 ASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 193
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+VLF+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 194 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAA 253
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F VF++PRA+ ++FVIP KY+K + + + +G RF+M FE ++S RR
Sbjct: 254 AAHAAATNSCFTVFFNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRY 313
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +T I+D+DP RWPNS WR + V WDE + Q +VS WEI+ + P
Sbjct: 314 MGTITSISDMDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 364
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 60/86 (69%), Gaps = 2/86 (2%)
Query: 683 KVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMVV 741
KV+K GS VGR++D+ R N Y++L EL +F +EG DP + GW++++ D ENDV+++
Sbjct: 719 KVYKSGS-VGRSLDISRFNSYHELREELAQMFGIEGKFEDPLRSGWQLVFVDRENDVLLL 777
Query: 742 GDDPWHEFCNEVSKIHIYTQEEVEKM 767
GDDPW F N V I I + E+++KM
Sbjct: 778 GDDPWESFVNNVWYIKILSPEDIQKM 803
>gi|297740768|emb|CBI30950.3| unnamed protein product [Vitis vinifera]
Length = 531
Score = 361 bits (926), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 182/351 (51%), Positives = 243/351 (69%), Gaps = 13/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA+S+ +PN+ L PQ+ C++ +V
Sbjct: 23 ELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQLICQLHNV 82
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L ++ +D + E G P+K + FCKTLT
Sbjct: 83 TMHADVETDEVYAQMTLQP--------LSPQEQKDAYLPAELG--VPSKQPSNYFCKTLT 132
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+A+DLH EW+FRHI+RGQP+RHLL
Sbjct: 133 ASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLL 192
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+VLF+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAA 252
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F +FY+PRA+ ++FVIP KY K + + + +G RF+M FE ++S RR
Sbjct: 253 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYAKAVYHTRVSVGMRFRMLFETEESSVRRY 312
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI+DLDP RWPNS WR + V WDE + Q +VS WEI+ + P
Sbjct: 313 MGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
>gi|379323206|gb|AFD01302.1| auxin response factor 6 [Brassica rapa subsp. pekinensis]
Length = 832
Score = 361 bits (926), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 185/351 (52%), Positives = 241/351 (68%), Gaps = 13/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA+S+ PN+ LQPQ+ C++ +V
Sbjct: 27 ELWHACAGPLVSLPPLGSRVVYFPQGHSEQVAASTNKEVDAHTPNYPSLQPQLICQLHNV 86
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L A++ +D + E G P++ + FCKTLT
Sbjct: 87 TMHADVETDEVYAQMTLQP--------LNAQEQKDSYLAAELG--VPSRQPTNYFCKTLT 136
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLDY QQ P+QEL+A+DLH EW+FRHI+RGQP+RHLL
Sbjct: 137 ASDTSTHGGFSVPRRAAEKVFPPLDYTQQPPAQELMARDLHDNEWKFRHIFRGQPKRHLL 196
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+VLF+ +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 197 TTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRAHRPQTVMPSSVLSSDSMHLGLLAA 256
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A T S F +FY+PRA+ ++FVIP KYVK + + + +G RF+M FE ++S RR
Sbjct: 257 AAHAAPTNSRFTIFYNPRASTSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRY 316
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI DLDP RW NS WR + V WDE D Q +VS WEI+ + P
Sbjct: 317 MGTITGICDLDPARWANSHWRSVKVGWDESTAGDRQPRVSLWEIEPLTTFP 367
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 60/116 (51%), Gaps = 23/116 (19%)
Query: 662 FSLTSETPTPSSQSPG---------KRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEH 712
FS T TP+ + PG + KV+K GS GR++D+ + + YN+L SEL
Sbjct: 679 FSGTMTTPSSCIEEPGFLQPSENQQSNTFVKVYKSGSF-GRSLDITKFSSYNELRSELAR 737
Query: 713 LFNMEGLLRDPAK-GWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
+F +EG L DP + GW++++ E EF + V I I + +EV++M
Sbjct: 738 MFGLEGQLEDPVRSGWQLVFVGRE------------EFVSSVWCIKILSPQEVQQM 781
>gi|414868951|tpg|DAA47508.1| TPA: hypothetical protein ZEAMMB73_035781 [Zea mays]
Length = 897
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 183/363 (50%), Positives = 249/363 (68%), Gaps = 13/363 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA+S+ ++PN+ +L PQ+ C++ +V
Sbjct: 25 ELWHACAGPLVSLPVVGSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLICQLHNV 84
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E +EVY Q+ L P L+ E ++ L ++ G + PT + FCKTLT
Sbjct: 85 TMHADAETEEVYAQMTLQP------LSPEEQKDPFLPIELGAGSKQPT----NYFCKTLT 134
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ QQ P QELVA+DLH EW+FRHI+RGQP+RHLL
Sbjct: 135 ASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPVQELVARDLHDNEWKFRHIFRGQPKRHLL 194
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+++F+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 195 TTGWSVFVSAKRLVAGDSIIFIWNDNNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAA 254
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F +FY+PRA+ ++FVIP KYVK + + + +G RF+M FE ++S RR
Sbjct: 255 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRY 314
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPR 416
G +TGI+DLD RWPNS WR + V WDE D Q +VS WEI+ + P R
Sbjct: 315 MGTITGISDLDSERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPLTTFPMYPTAFPLR 374
Query: 417 MKK 419
+K+
Sbjct: 375 LKR 377
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 65/98 (66%), Gaps = 2/98 (2%)
Query: 682 TKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMV 740
KV+K GSL GR++D+ R Y +L ELE LF +EG L DPA+ GW++++ D ENDV++
Sbjct: 766 VKVYKSGSL-GRSLDITRFGSYYELRVELERLFGLEGQLEDPARSGWQLVFVDRENDVLL 824
Query: 741 VGDDPWHEFCNEVSKIHIYTQEEVEKMTIGTTDDTQSC 778
+GDDPW EF N V I I + +++++M G D S
Sbjct: 825 LGDDPWQEFVNSVGCIKILSPQDLQQMARGGGGDLLSA 862
>gi|301793223|emb|CBA12002.1| putative auxin response factor 6/8 [Ephedra distachya]
Length = 870
Score = 360 bits (925), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 183/345 (53%), Positives = 242/345 (70%), Gaps = 13/345 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA+S+ +++PN+ L PQ+ C + +V
Sbjct: 21 ELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNRELDVQIPNYTSLPPQLICHLHNV 80
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L+L+ +Q E V + G SP+K + FC TLT
Sbjct: 81 TMNADVETDEVYAQMTLQP------LSLQ-EQKESYFVPDLG---SPSKQPSNYFCXTLT 130
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFS+PRRAAE FP LD+ QQ P+QEL A+DLH EW+FRHIYRGQP+RHLL
Sbjct: 131 ASDTSTHGGFSIPRRAAEKVFPLLDFTQQPPAQELCARDLHNTEWKFRHIYRGQPKRHLL 190
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+VLF+R G+L LGIRR+ + +P S+LS + + VL+
Sbjct: 191 TTGWSVFVSAKRLVAGDSVLFIRNDSGQLLLGIRRANKSPTVMPSSVLSSDSMHIGVLAA 250
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F++FY+PRA+ ++FVIP+ KY K + + + +G RF+M FE ++S RR
Sbjct: 251 AAHAAATNSPFNIFYNPRASPSEFVIPFSKYEKAVYHTQVSVGLRFRMLFETEESGVRRY 310
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
G +TGI D+DP RWPNS+WR L V WDE + +VS WEI+
Sbjct: 311 MGTITGIGDMDPVRWPNSRWRSLKVGWDESTAGERNPRVSLWEIE 355
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 50/123 (40%), Positives = 76/123 (61%), Gaps = 5/123 (4%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDV 738
R+ TKV+K GS +GR+ID+ R +GY +L EL +FN+EG L D GW++++ D ENDV
Sbjct: 738 RTFTKVYKLGS-IGRSIDVTRFSGYPELRCELARMFNLEGQLEDCRSGWQLVFVDKENDV 796
Query: 739 MVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGTTDDTQSCLDQAPVIMEVSVSKSSSVSQ 798
+++GDDPW EF V I I + EV++M T + L+ P+ + S S +++
Sbjct: 797 LLLGDDPWEEFVINVRYIKILSPPEVQQM----TQEGMELLNSIPLQRQTSSSSEECLTR 852
Query: 799 PDS 801
DS
Sbjct: 853 QDS 855
>gi|379323234|gb|AFD01316.1| auxin response factor 18-2 [Brassica rapa subsp. pekinensis]
Length = 555
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 185/396 (46%), Positives = 254/396 (64%), Gaps = 25/396 (6%)
Query: 46 NSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSS--AFPPIEVPN 103
+S S S + +Y ELW ACAGPL +P G V YFPQGH+EQ+ +S+ E+P+
Sbjct: 10 RTSLSRSYNDELYTELWKACAGPLVEVPLAGEKVFYFPQGHMEQLVASTNQGIESEEIPD 69
Query: 104 FDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGL-NLEAKQLEDLGVDEEGGGR 162
F L P+I C+V+ V L A + DEVY Q+ L P+ + L +L+ +E
Sbjct: 70 FKLPPKILCRVLSVMLKAEHDTDEVYAQITLKPEEDQSELTSLDPPLVE----------- 118
Query: 163 SPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEW 222
PTK H F K LTASDTSTHGGFSV R+ A +C P LD Q P+QELV +DLHG EW
Sbjct: 119 -PTKQMFHSFVKILTASDTSTHGGFSVLRKHATECLPALDMGQATPTQELVTRDLHGFEW 177
Query: 223 RFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPD 282
RF+HI+RGQPRRHLLTTGWS FVS K LV+GDA +FLRG++G+LR+G+RR + ++ +P
Sbjct: 178 RFKHIFRGQPRRHLLTTGWSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPT 237
Query: 283 SILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRF 342
S++S Q+ + VL+ ++AV TK++F VFY PR + F++ KY++ + + +GTRF
Sbjct: 238 SVISSQSMHLGVLATASHAVVTKTIFLVFYKPRISQ--FIVGVNKYMEAMKHGFSLGTRF 295
Query: 343 KMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDR 402
+MRFE ++SPER G + GI DL +WP S WR L V+WDE ++VSPWEI+
Sbjct: 296 RMRFEGEESPERMFTGTIVGIGDLSS-QWPASTWRSLQVQWDEPTTFQRPDRVSPWEIEP 354
Query: 403 SVSLPPLSI---QSSPRMKKLR----TGLQAPPPDY 431
+S PP+S QS P+ K+ R + L PP +
Sbjct: 355 FLSSPPVSTPAQQSQPKCKRSRPVESSVLTPAPPSF 390
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 76/128 (59%), Gaps = 18/128 (14%)
Query: 658 KLFGFSLTSETPTP-------------SSQSPGK----RSCTKVHKQGSLVGRAIDLWRL 700
+LFGF LTS P P ++ P K R+ TKV QG VGRA+DL L
Sbjct: 413 RLFGFDLTSNPPAPIPPDKCQEPITPSAANEPKKQQKQRTRTKVIMQGVAVGRAVDLTLL 472
Query: 701 NGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYT 760
YN+L+ ELE +F ++G L K W +++TD E D+M+ GDDPW+EFC KI IY+
Sbjct: 473 KSYNELIKELEEMFEIKGQLLTREK-WVVVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYS 531
Query: 761 QEEVEKMT 768
+EV+KMT
Sbjct: 532 SDEVKKMT 539
>gi|242086258|ref|XP_002443554.1| hypothetical protein SORBIDRAFT_08g021460 [Sorghum bicolor]
gi|241944247|gb|EES17392.1| hypothetical protein SORBIDRAFT_08g021460 [Sorghum bicolor]
Length = 895
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 183/363 (50%), Positives = 249/363 (68%), Gaps = 13/363 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA+S+ ++PN+ +L PQ+ C++ +V
Sbjct: 25 ELWHACAGPLVSLPVVGSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLICQLHNV 84
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E +EVY Q+ L P L+ E ++ L ++ G + PT + FCKTLT
Sbjct: 85 TMHADAETEEVYAQMTLQP------LSPEEQKEPFLPIELGAGSKQPT----NYFCKTLT 134
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ QQ P QELVA+DLH EW+FRHI+RGQP+RHLL
Sbjct: 135 ASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPVQELVARDLHDNEWKFRHIFRGQPKRHLL 194
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+++F+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 195 TTGWSVFVSAKRLVAGDSIIFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAA 254
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F +FY+PRA+ ++FVIP KYVK + + + +G RF+M FE ++S RR
Sbjct: 255 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRY 314
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPR 416
G +TGI+DLD RWPNS WR + V WDE D Q +VS WEI+ + P R
Sbjct: 315 MGTITGISDLDSERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPLTTFPMYPTAFPLR 374
Query: 417 MKK 419
+K+
Sbjct: 375 LKR 377
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/93 (48%), Positives = 65/93 (69%), Gaps = 2/93 (2%)
Query: 682 TKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMV 740
KV+K GSL GR++D+ R + Y +L SELE LF +EG L DP + GW++++ D END+++
Sbjct: 765 VKVYKSGSL-GRSLDITRFSSYYELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDILL 823
Query: 741 VGDDPWHEFCNEVSKIHIYTQEEVEKMTIGTTD 773
VGDDPW EF N V I I + ++V++M G D
Sbjct: 824 VGDDPWQEFVNSVWCIKILSPQDVQQMVRGGGD 856
>gi|356510873|ref|XP_003524158.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 884
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 181/351 (51%), Positives = 244/351 (69%), Gaps = 13/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVA-SSSAFPPIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA S++ +PN+ L PQ+ C++ +V
Sbjct: 23 ELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNREVDGHIPNYPSLPPQLICQLHNV 82
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L ++ ++ + E G +P+K + FCK LT
Sbjct: 83 TMHADTETDEVYAQMTLQP--------LNPQEQKEAYLPAELG--TPSKQPTNYFCKILT 132
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ QQ P QEL+A+DLHG EW+FRHI+RGQP+RHLL
Sbjct: 133 ASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPCQELIARDLHGNEWKFRHIFRGQPKRHLL 192
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+VLF+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQPVMPSSVLSSDSMHLGLLAA 252
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F +FY+PRA+ ++FVIP+ KYVK + + + +G RF+M FE ++S RR
Sbjct: 253 AAHAAATNSRFTIFYNPRASPSEFVIPFAKYVKAVYHTRVSVGMRFRMLFETEESSVRRY 312
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI+DLD RWPNS WR + V WDE + Q +VS WEI+ + P
Sbjct: 313 MGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 67/103 (65%), Gaps = 3/103 (2%)
Query: 667 ETPTPSSQ-SPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK 725
+TP Q +P ++ KV+K GS GR++D+ + Y +L SEL +F +EG L DP +
Sbjct: 738 QTPENGGQGNPTNKTFVKVYKSGSF-GRSLDITKFTSYPELRSELARMFGLEGELEDPVR 796
Query: 726 -GWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
GW++++ D ENDV+++GD PW EF N V I I + +EV++M
Sbjct: 797 SGWQLVFVDQENDVLLLGDGPWPEFVNSVGCIKILSPQEVQQM 839
>gi|449515293|ref|XP_004164684.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 6-like,
partial [Cucumis sativus]
Length = 884
Score = 360 bits (924), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 180/351 (51%), Positives = 245/351 (69%), Gaps = 13/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA+S+ ++PN+ L PQ+ C++ ++
Sbjct: 8 ELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAASTNREVDAQIPNYPSLPPQLICQLHNL 67
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L A++L++ + E G +P++ + FCKTLT
Sbjct: 68 TMHADAETDEVYAQMTLQP--------LSAQELKEAYLPAELG--TPSRQPTNYFCKTLT 117
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ Q P+QEL+A+DLH EW+FRHI+RGQP+RHLL
Sbjct: 118 ASDTSTHGGFSVPRRAAEKVFPPLDFSMQPPAQELIARDLHDNEWKFRHIFRGQPKRHLL 177
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GDAVLF+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 178 TTGWSVFVSAKRLVAGDAVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHLGLLAA 237
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F +F++PRA+ ++FVIP KYVK + + + +G RF+M FE +S RR
Sbjct: 238 AAHAAATISRFTIFFNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETXESSVRRY 297
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI+DLDP RW NS WR + V WDE + Q +VS WEI+ + P
Sbjct: 298 MGTITGISDLDPVRWQNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 348
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 60/93 (64%), Gaps = 2/93 (2%)
Query: 676 PGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDS 734
P + KVHK G+ R++D+ + N Y +L SEL +F +EG L DP + GW++++ D
Sbjct: 748 PPNGTFVKVHKSGT-YSRSLDITKFNSYPELRSELARMFGLEGELEDPLRSGWQLVFVDR 806
Query: 735 ENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
ENDV+++GD PW EF N V I I + EEV+ M
Sbjct: 807 ENDVLLLGDGPWPEFVNSVWCIKILSPEEVQDM 839
>gi|356569910|ref|XP_003553137.1| PREDICTED: auxin response factor 8-like [Glycine max]
Length = 841
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 182/351 (51%), Positives = 241/351 (68%), Gaps = 13/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G VVYFPQGH EQVA+++ +PN+ L PQ+ C++ +V
Sbjct: 24 ELWHACAGPLVSLPTAGTRVVYFPQGHSEQVAATTNREIDGHIPNYPSLPPQLICQLHNV 83
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L ++ +D + E G P+K + FCKTLT
Sbjct: 84 TMHADVETDEVYAQMTLQP--------LTPQEQKDTFLSMELG--IPSKQPSNYFCKTLT 133
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ Q P+QEL+A+DLH EW+FRHI+RGQP+RHLL
Sbjct: 134 ASDTSTHGGFSVPRRAAEKVFPPLDFSLQPPAQELIARDLHDAEWKFRHIFRGQPKRHLL 193
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWSIFVS K LV+GD+VLF+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 194 TTGWSIFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAA 253
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F VFY+PRA+ ++FVIP KY+K + + I +G RF+M FE ++S RR
Sbjct: 254 AAHAAATNSCFTVFYNPRASPSEFVIPLSKYIKAVYHTRISVGMRFRMLFETEESSVRRY 313
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI+DLD RWPNS WR + V WDE + Q +VS WEI+ + P
Sbjct: 314 MGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 364
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 87/165 (52%), Gaps = 6/165 (3%)
Query: 605 NSSSIQMPAIGAEIRKANLLNEHKPVENIPTPTFKANMRSHKDGSFNGTAAGCKLFGFSL 664
NS + G I + LL P + ++ D F G+ GC L
Sbjct: 643 NSDAQNSTLFGVNIDSSGLLPITVPGYTTSSADTNSSTMPLADSGFQGSLYGCMDSSELL 702
Query: 665 TSETPT-PSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDP 723
S P +QS ++ KV+K GS VGR++D+ R + Y++L EL +F +EG L DP
Sbjct: 703 QSAGHVDPENQS---QTFVKVYKSGS-VGRSLDISRFSSYHELREELAQMFGIEGKLEDP 758
Query: 724 AK-GWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
+ GW++++ D ENDV+++GDDPW F N V I I + E+++KM
Sbjct: 759 LRSGWQLVFVDRENDVLLLGDDPWESFVNNVWYIKILSPEDIQKM 803
>gi|350539842|ref|NP_001234545.1| auxin response factor 5 [Solanum lycopersicum]
gi|300253180|gb|ADJ96592.1| auxin response factor 5 [Solanum lycopersicum]
gi|310697420|gb|ADP06665.1| auxin response factor 5 [Solanum lycopersicum]
Length = 930
Score = 360 bits (923), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 183/355 (51%), Positives = 240/355 (67%), Gaps = 18/355 (5%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVA-SSSAFPPIEVPNF-DLQPQIFCKV 114
I ELWHACAGPL +LP+ G++V YFPQGH EQVA S++ ++PN+ +L Q+ C+V
Sbjct: 41 ISSELWHACAGPLVTLPQVGSLVYYFPQGHSEQVAVSTNRTATSQIPNYPNLASQLLCQV 100
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQ--LEDLGVDEEGGGRSPTKSTPHMF 172
+V L A+KE DE+Y Q++L P +N E + D G+ P K F
Sbjct: 101 HNVTLHADKETDEIYAQMSLQP------VNSEKDVFPIPDFGL-------KPNKHPTEFF 147
Query: 173 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQP 232
CKTLTASDTSTHGGFSVPRRAAE FPPLDY Q P+QELV +DLH W FRHIYRGQP
Sbjct: 148 CKTLTASDTSTHGGFSVPRRAAEKLFPPLDYSMQPPTQELVVRDLHDNTWTFRHIYRGQP 207
Query: 233 RRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYP 292
+RHLLTTGWS+FV K L +GD+VLF+R + +L LG+RR+ + + LP S+LS + +
Sbjct: 208 KRHLLTTGWSMFVGAKRLRAGDSVLFIRDEKSQLLLGVRRANRQQTSLPSSVLSADSMHI 267
Query: 293 NVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDS 351
VL+ A+A + +S F +FY+PRA ++FVIP K+ K + N + +G RF M FE ++S
Sbjct: 268 GVLAAAAHAAANRSTFTIFYNPRACPSEFVIPLAKFRKSVYNTQLSVGMRFGMMFETEES 327
Query: 352 PERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSL 406
+RR G ++GI+DLDP RWP SKWRCL V WDE D Q +VSPWE++ SL
Sbjct: 328 GKRRYMGTISGISDLDPLRWPGSKWRCLQVEWDEPGCGDKQNRVSPWEVETPESL 382
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
Query: 675 SPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDP-AKGWRILYTD 733
+P R+ TK+ K GS VGR+ID+ Y +L SE+E +F +EGLL D W+++Y D
Sbjct: 813 APRVRTYTKIQKTGS-VGRSIDVSGFKNYEELRSEIERMFGLEGLLNDTRGSSWKLVYVD 871
Query: 734 SENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
ENDV++VGDDPW EF V I I + EV++M
Sbjct: 872 FENDVLLVGDDPWEEFVGCVRCIRILSPTEVQQM 905
>gi|224072228|ref|XP_002303662.1| predicted protein [Populus trichocarpa]
gi|222841094|gb|EEE78641.1| predicted protein [Populus trichocarpa]
Length = 575
Score = 360 bits (923), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 186/374 (49%), Positives = 252/374 (67%), Gaps = 17/374 (4%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKVV 115
+Y ELW ACAGPL +PK+G V YFPQGH+EQ+ AS++ VP F+L +I C+V+
Sbjct: 17 LYTELWKACAGPLVDVPKRGERVFYFPQGHMEQLEASTNQELNQRVPLFNLPSKILCRVI 76
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKT 175
+ QLLA +E DEVY Q+ LLP E+ Q+E D P + T H FCK
Sbjct: 77 NTQLLAEQETDEVYAQITLLP---------ESDQIETTSPDP--CPSEPPRPTVHSFCKV 125
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
LTASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG EWRF+HI+RGQPRRH
Sbjct: 126 LTASDTSTHGGFSVLRKHASECLPPLDMIQPIPTQELVAKDLHGYEWRFKHIFRGQPRRH 185
Query: 236 LLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVL 295
LLTTGWS FV+ K LV+GD+ +FLRG++GELR+G+RR + ++ +P S++S Q+ + VL
Sbjct: 186 LLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVRRVARQQSSMPSSVISSQSMHLGVL 245
Query: 296 SVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERR 355
+ ++A+ST ++F V+Y PR + F+I KY++ + N +G RFKMRFE +DSPERR
Sbjct: 246 ATASHAISTLTLFVVYYKPRTSQ--FIISLNKYLEAVNNKFAVGMRFKMRFEGEDSPERR 303
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPP--LSIQS 413
+G + G+ D P+ W +SKWR L V+WDE ++VSPWEI+ V+ P LS
Sbjct: 304 FSGTIVGVEDFSPH-WNDSKWRSLKVQWDEPASISRPDRVSPWEIEPCVASVPANLSQPV 362
Query: 414 SPRMKKLRTGLQAP 427
P+ K+ R ++ P
Sbjct: 363 QPKNKRPRPPIEIP 376
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/97 (51%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
Query: 675 SPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDS 734
S RS TKV QG VGRA+DL + GY L+ ELE LF+++G L P W I+YTD
Sbjct: 478 STSTRSRTKVQLQGIAVGRAVDLTLIKGYGQLIDELEQLFDIKGQLH-PRDKWEIVYTDD 536
Query: 735 ENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGT 771
E D+M+VGDDPW EFCN V +I I + ++V+KM+ G+
Sbjct: 537 EGDMMLVGDDPWPEFCNMVRRIFICSSQDVKKMSPGS 573
>gi|357460625|ref|XP_003600594.1| Auxin response factor [Medicago truncatula]
gi|355489642|gb|AES70845.1| Auxin response factor [Medicago truncatula]
Length = 849
Score = 359 bits (922), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 183/351 (52%), Positives = 243/351 (69%), Gaps = 13/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G VVYFPQGH EQV A+++ ++PN+ L PQ+ C++ +V
Sbjct: 26 ELWHACAGPLVSLPTAGTRVVYFPQGHSEQVSATTNREIDGQIPNYPSLPPQLVCQLHNV 85
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L ++ +D + E G P+K + FCKTLT
Sbjct: 86 TMHADVETDEVYAQMTLQP--------LTPEEQKDTFLPMELG--IPSKQPSNYFCKTLT 135
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+A+DLH VEW+FRHI+RGQP+RHLL
Sbjct: 136 ASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 195
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWSIFVS K LV+GD+VLF+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 196 TTGWSIFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAA 255
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F VFY+PRA+ ++FVIP KY+K + + I +G RF+M FE ++S RR
Sbjct: 256 AAHASATNSCFTVFYNPRASPSEFVIPLSKYIKAVYHTRISVGMRFRMLFETEESSVRRY 315
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI+DLD RW NS WR + V WDE + Q +VS WEI+ + P
Sbjct: 316 MGTITGISDLDAVRWQNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 366
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 74/123 (60%), Gaps = 6/123 (4%)
Query: 647 DGSFNGTAAGC-KLFGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYND 705
+ F G+ C + F +E +Q+P + KV+K GS VGR++D+ R + Y +
Sbjct: 693 ESGFQGSLYACMQDSSFLQNAEQIDTQNQNP---TFVKVYKSGS-VGRSLDISRFSCYRE 748
Query: 706 LLSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEV 764
L EL +F +EG L DP + GW++++ D ENDV+++GDDPW F N V I I + E++
Sbjct: 749 LREELGQMFGIEGKLEDPLRSGWQLVFVDRENDVLLLGDDPWESFVNNVWYIKILSPEDI 808
Query: 765 EKM 767
+KM
Sbjct: 809 QKM 811
>gi|350539862|ref|NP_001234552.1| auxin response factor 8-1 [Solanum lycopersicum]
gi|302035373|gb|ADK92393.1| auxin response factor 8-1 [Solanum lycopersicum]
Length = 844
Score = 359 bits (922), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 181/351 (51%), Positives = 242/351 (68%), Gaps = 13/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL LP G+ VVYFPQGH EQVA+++ I +PN+ +L PQ+ C++ +V
Sbjct: 23 ELWHACAGPLVCLPTVGSRVVYFPQGHSEQVAATTNKEVDIHIPNYPNLPPQLICQLHNV 82
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L L+ ++ L V+ R PT + FCKTLT
Sbjct: 83 TMHADVETDEVYAQMTLQP------LTLQEQKDTYLPVELGIPSRQPT----NYFCKTLT 132
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ Q P QEL+A+DLH +EW+FRHI+RGQP+RHLL
Sbjct: 133 ASDTSTHGGFSVPRRAAEKVFPPLDFSQTPPCQELIARDLHDIEWKFRHIFRGQPKRHLL 192
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+VLF+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLFLGIRRATRPQTVMPSSVLSSDSMHIGLLAA 252
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A ST S F VF++PRA+ ++FVIP KY+K + + + +G RF+M FE ++S RR
Sbjct: 253 AAHAASTNSCFIVFFNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRY 312
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI DLDP RW NS WR + V WDE + Q +VS WEI+ + P
Sbjct: 313 MGTITGIGDLDPVRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 63/90 (70%), Gaps = 2/90 (2%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSEND 737
R+ KV+K SL GR++D+ R N Y++L EL +F +EG L +P + GW++++ D END
Sbjct: 717 RTFVKVYKSASL-GRSLDITRFNSYHELRQELGQMFGIEGFLENPQRSGWQLVFVDREND 775
Query: 738 VMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
V+++GDDPW EF N V I I + E+V+K+
Sbjct: 776 VLLLGDDPWEEFVNNVWYIKILSPEDVQKL 805
>gi|73697834|gb|AAZ81521.1| auxin response factor 1 [Gossypium barbadense]
Length = 673
Score = 359 bits (921), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 179/367 (48%), Positives = 243/367 (66%), Gaps = 13/367 (3%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKVV 115
+Y ELWHACAGPL +LP+ G V YFPQGH+EQ+ AS ++P+FDL +I CKV
Sbjct: 19 LYRELWHACAGPLVTLPRVGERVYYFPQGHMEQLEASMHQGLEHQMPSFDLPSKILCKVA 78
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKT 175
VQ A + DEVY Q+ L+P E Q E + D+ + P + H FCKT
Sbjct: 79 SVQRKAEPDTDEVYAQITLVP---------EVDQSEVMSPDDPL--QEPERCIVHSFCKT 127
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
LTASDTSTHGGFSV RR A+DC PPLD QQ P QEL+A DLHG EW FRHI+RGQPRRH
Sbjct: 128 LTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELIATDLHGNEWHFRHIFRGQPRRH 187
Query: 236 LLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVL 295
LLTTGWS+FVS K LV+GDA +FLRG +G+LR+G+RR ++ + +P S++S + + VL
Sbjct: 188 LLTTGWSVFVSSKKLVAGDAFIFLRGANGDLRVGVRRLMRQQANMPSSVISSHSMHLGVL 247
Query: 296 SVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERR 355
+ + A+ST+SMF +FY PR + ++F++ KY++ + + +G RFKMRFE ++ PERR
Sbjct: 248 ATASYALSTRSMFSIFYKPRTSLSEFIVSVNKYLEARSHKLSVGMRFKMRFEGEEVPERR 307
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSI-QSS 414
+G + G+ W +S+WR L V+WDE ++VSPWE++ V+ SI Q +
Sbjct: 308 FSGTIVGVEADKSSGWADSEWRSLKVQWDEPSSIIRPDRVSPWELEPLVATSNSSISQPA 367
Query: 415 PRMKKLR 421
R K+ R
Sbjct: 368 QRNKRAR 374
Score = 123 bits (308), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 55/96 (57%), Positives = 73/96 (76%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYT 732
SQS RSCTKVH QG VGRA+DL R + Y DLL +LE++F+++G L K W+++YT
Sbjct: 540 SQSKQIRSCTKVHMQGMAVGRAVDLTRFDCYEDLLKKLEYMFDIKGQLCGSTKNWQVVYT 599
Query: 733 DSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
D E+D+M+VGDDPW+EFC+ V KI IYT EEV K++
Sbjct: 600 DDEDDMMMVGDDPWNEFCSMVRKIFIYTSEEVRKLS 635
>gi|224134659|ref|XP_002327459.1| predicted protein [Populus trichocarpa]
gi|222836013|gb|EEE74434.1| predicted protein [Populus trichocarpa]
Length = 799
Score = 359 bits (921), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 185/352 (52%), Positives = 242/352 (68%), Gaps = 14/352 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA+++ +PN+ L PQ+ C++ +V
Sbjct: 11 ELWHACAGPLVSLPTMGSRVVYFPQGHSEQVAATTNKEVDAHIPNYPSLPPQLICQLHNV 70
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L QP E DLG+ P+K + FCKTLT
Sbjct: 71 TMHADVETDEVYAQMTL--QPLTPQEQKETFLPLDLGM--------PSKQPTNYFCKTLT 120
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+A+DLH VEW+FRHI+RGQP+RHLL
Sbjct: 121 ASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 180
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+VLF+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 181 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAA 240
Query: 298 VANAVSTKSMFHVFYSPR-ATHADFVIPYQKYVKIIMN-PICIGTRFKMRFEMDDSPERR 355
A+A +T S F VFY+PR A+ ++FVIP KYVK + + + +G RF+M FE ++S RR
Sbjct: 241 AAHAAATNSCFTVFYNPRWASPSEFVIPLSKYVKAVFHIRVSVGMRFRMLFETEESSVRR 300
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TG +DLDP RWPNS WR + V WDE + Q +VS WEI+ S P
Sbjct: 301 YMGTITGTSDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTSFP 352
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 82/146 (56%), Gaps = 15/146 (10%)
Query: 630 VENIPTPTFKANMRSHK--DGSFNGTAAGC-----KLFGFSLTSETPTPSSQSPGKRSCT 682
V PT T ++ S D F + GC +L + + PTPS R+
Sbjct: 646 VPRYPTSTVDTDVSSMPLGDSGFQNSLYGCVQDSSELLPNAGQMDPPTPS------RTFV 699
Query: 683 KVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMVV 741
KV+K GS VGR++D+ R + Y++L EL +F +EG L +P + GW++++ D ENDV+++
Sbjct: 700 KVYKSGS-VGRSLDISRFSSYHELREELAQMFGIEGKLENPHRSGWQLVFVDRENDVLLL 758
Query: 742 GDDPWHEFCNEVSKIHIYTQEEVEKM 767
GDDPW F N V I I + E+V KM
Sbjct: 759 GDDPWELFVNNVWYIKILSPEDVLKM 784
>gi|350536917|ref|NP_001234783.1| auxin response factor 8 [Solanum lycopersicum]
gi|154550159|gb|ABS83388.1| auxin response factor 8 [Solanum lycopersicum]
Length = 844
Score = 358 bits (920), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 181/351 (51%), Positives = 241/351 (68%), Gaps = 13/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL LP G+ VVYFPQGH EQVA+++ I +PN+ +L PQ+ C + +V
Sbjct: 23 ELWHACAGPLVCLPTVGSRVVYFPQGHSEQVAATTNKELDIHIPNYPNLPPQLICPLHNV 82
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L L+ ++ L V+ R PT + FCKTLT
Sbjct: 83 TMHADVETDEVYAQMTLQP------LTLQEQKDTYLPVELGIPSRQPT----NYFCKTLT 132
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ Q P QEL+A+DLH +EW+FRHI+RGQP+RHLL
Sbjct: 133 ASDTSTHGGFSVPRRAAEKVFPPLDFSQTPPCQELIARDLHDIEWKFRHIFRGQPKRHLL 192
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+VLF+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLFLGIRRATRPQTVMPSSVLSSDSMHIGLLAA 252
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A ST S F VF++PRA+ ++FVIP KY+K + + + +G RF+M FE ++S RR
Sbjct: 253 AAHAASTNSCFIVFFNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRY 312
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI DLDP RW NS WR + V WDE + Q +VS WEI+ + P
Sbjct: 313 MGTITGIGDLDPVRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
Score = 95.9 bits (237), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 43/90 (47%), Positives = 64/90 (71%), Gaps = 2/90 (2%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSEND 737
R+ KV+K SL GR++D+ R N Y++L EL +F +EGLL DP + GW++++ D END
Sbjct: 717 RTFVKVYKSASL-GRSLDITRFNSYHELRQELGQMFGIEGLLEDPQRSGWQLVFVDREND 775
Query: 738 VMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
V+++GDDPW EF N V I I + E+V+K+
Sbjct: 776 VLLLGDDPWEEFVNNVWYIKILSPEDVQKL 805
>gi|297738133|emb|CBI27334.3| unnamed protein product [Vitis vinifera]
Length = 486
Score = 358 bits (920), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 183/352 (51%), Positives = 245/352 (69%), Gaps = 14/352 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA+++ +PN+ L PQ+ C++ +V
Sbjct: 24 ELWHACAGPLVSLPTVGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLICQLHNV 83
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L ++ +D + E G P+K + FCKTLT
Sbjct: 84 TMHADVETDEVYAQMTLQP--------LTPQEQKDTFLPVELG--IPSKQPTNYFCKTLT 133
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRG-QPRRHL 236
ASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+A+DLH VEW+FRHI+RG QP+RHL
Sbjct: 134 ASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRGRQPKRHL 193
Query: 237 LTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLS 296
LTTGWS+FVS K LV+GD+VLF+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 194 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLA 253
Query: 297 VVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERR 355
A+A +T S F +FY+PRA+ ++FVIP KYVK + + + +G RF+M FE ++S RR
Sbjct: 254 AAAHAAATNSCFTIFYNPRASPSEFVIPLSKYVKAVFHTRVSVGMRFRMLFETEESSVRR 313
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI+DLDP RWPNS WR + V WDE + Q +VS WEI+ + P
Sbjct: 314 YMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 365
>gi|379323214|gb|AFD01306.1| auxin response factor 8-2 [Brassica rapa subsp. pekinensis]
Length = 844
Score = 358 bits (920), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 181/351 (51%), Positives = 242/351 (68%), Gaps = 13/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA+++ +PN+ L PQ+ C++ +V
Sbjct: 22 ELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLICQLHNV 81
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L ++ ++ V E G P+K + FCKTLT
Sbjct: 82 TMHADVETDEVYAQMTLQP--------LTPEEQKETFVPIELG--IPSKQPSNYFCKTLT 131
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLDY Q P+QEL+A+DLH VEW+FRHI+RGQP+RHLL
Sbjct: 132 ASDTSTHGGFSVPRRAAEKVFPPLDYSLQPPAQELLARDLHDVEWKFRHIFRGQPKRHLL 191
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+V+F+R + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 192 TTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRRATRPQTIVPSSVLSSDSMHIGLLAA 251
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F VF+ PRA+ ++FVI KY+K + + I +G RF+M FE ++S RR
Sbjct: 252 AAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEESSVRRY 311
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI+DLD RWPNS WR + V WDE + Q +VS WEI+ + P
Sbjct: 312 MGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 362
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 70/99 (70%), Gaps = 5/99 (5%)
Query: 670 TPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWR 728
+PS+Q+ ++ KV+K GS VGR++D+ R + Y++L EL +F +EGLL DP + GW+
Sbjct: 732 SPSNQT---KNFVKVYKSGS-VGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQ 787
Query: 729 ILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
+++ D END++++GDDPW F + V I I + E+V++M
Sbjct: 788 LVFVDKENDILLLGDDPWESFVSNVWYIKILSPEDVQEM 826
>gi|356560266|ref|XP_003548414.1| PREDICTED: auxin response factor 7-like [Glycine max]
Length = 799
Score = 358 bits (919), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 184/383 (48%), Positives = 251/383 (65%), Gaps = 20/383 (5%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKVV 115
+Y ELW CAGPL +P+ G+ V YFPQGH+EQ+ AS+ E+P+F+L +IFC+VV
Sbjct: 112 LYRELWKLCAGPLVDVPRTGDRVFYFPQGHMEQLQASTDQELNQEIPHFNLPAKIFCRVV 171
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKT 175
++QLLA ++ DEVY +ALLP E+ Q E D P K H FCK
Sbjct: 172 NIQLLAEQDTDEVYACIALLP---------ESDQTEPTNPDPNIS--EPPKQKFHSFCKI 220
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
LTASDTSTHGGFSV R+ A +C P LD Q P+QEL AKDLHG EW+F+HIYRGQPRRH
Sbjct: 221 LTASDTSTHGGFSVLRKHATECLPALDMTQATPTQELAAKDLHGFEWKFKHIYRGQPRRH 280
Query: 236 LLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVL 295
LLTTGWS FV+ K LV+GDA +FLRG+ G+LR+G+RR + ++ +P S++S Q+ + VL
Sbjct: 281 LLTTGWSTFVASKRLVAGDAFVFLRGEHGQLRVGVRRLARQQSPMPSSVISSQSMHLGVL 340
Query: 296 SVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERR 355
+ ++AV T++MF V+Y PR + F++ KY++ + N +G RFKMRFE DDSPERR
Sbjct: 341 ATASHAVMTRTMFLVYYKPRTSQ--FIVGLNKYLEAVNNKFSLGMRFKMRFEGDDSPERR 398
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSP 415
+G + G+ D+ W NS+WR L V+WDE ++VS WEI+ V+ L++ + P
Sbjct: 399 FSGTIVGVGDVSA-GWSNSQWRSLKVQWDEPATIPRPDRVSCWEIEPFVASTALNV-TQP 456
Query: 416 RMKKLRTGLQAPPPDYPVSARGG 438
+K G ++ P D SA G
Sbjct: 457 AVK----GKRSRPADVSSSAASG 475
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 49/92 (53%), Positives = 64/92 (69%), Gaps = 1/92 (1%)
Query: 676 PGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSE 735
P R+ TKV QG VGRA DL L+GY+DL+ ELE LF + G L K W + +TD E
Sbjct: 676 PSMRTRTKVQMQGVAVGRAFDLTTLSGYDDLIEELEKLFEIRGELHSQDK-WAVTFTDDE 734
Query: 736 NDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
ND+M+VGDDPW EFCN V +I I ++E+++KM
Sbjct: 735 NDMMLVGDDPWPEFCNMVKRIFICSREDLKKM 766
>gi|18412151|ref|NP_567119.1| auxin response factor 18 [Arabidopsis thaliana]
gi|46576636|sp|Q9C5W9.1|ARFR_ARATH RecName: Full=Auxin response factor 18
gi|12248007|gb|AAG50095.1|AF334717_1 auxin response factor ARF18 [Arabidopsis thaliana]
gi|16604603|gb|AAL24094.1| auxin response factor ARF18 [Arabidopsis thaliana]
gi|17979225|gb|AAL49929.1| AT3g61830/F15G16_220 [Arabidopsis thaliana]
gi|20259231|gb|AAM14331.1| putative auxin response factor protein [Arabidopsis thaliana]
gi|332646743|gb|AEE80264.1| auxin response factor 18 [Arabidopsis thaliana]
Length = 602
Score = 358 bits (919), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 180/366 (49%), Positives = 238/366 (65%), Gaps = 16/366 (4%)
Query: 47 SSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSS--AFPPIEVPNF 104
SSSS S +Y ELW CAGPL +P+ V YFPQGH+EQ+ +S+ E+P F
Sbjct: 12 SSSSRSYQDQLYTELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVASTNQGINSEEIPVF 71
Query: 105 DLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSP 164
DL P+I C+V+DV L A E DEVY Q+ L P E Q E +D G P
Sbjct: 72 DLPPKILCRVLDVTLKAEHETDEVYAQITLQP---------EEDQSEPTSLDPPIVG--P 120
Query: 165 TKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRF 224
TK H F K LTASDTSTHGGFSV R+ A +C P LD Q P+QELV +DLHG EWRF
Sbjct: 121 TKQEFHSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRF 180
Query: 225 RHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSI 284
+HI+RGQPRRHLLTTGWS FVS K LV+GDA +FLRG++G+LR+G+RR + ++ +P S+
Sbjct: 181 KHIFRGQPRRHLLTTGWSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSV 240
Query: 285 LSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKM 344
+S Q+ + VL+ ++AV T ++F VFY PR + F++ KY++ I + +GTRF+M
Sbjct: 241 ISSQSMHLGVLATASHAVRTTTIFVVFYKPRISQ--FIVGVNKYMEAIKHGFSLGTRFRM 298
Query: 345 RFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSV 404
RFE ++SPER G + G DL +WP SKWR L V+WDE ++VSPWEI+ +
Sbjct: 299 RFEGEESPERIFTGTIVGSGDLS-SQWPASKWRSLQVQWDEPTTVQRPDKVSPWEIEPFL 357
Query: 405 SLPPLS 410
+ P+S
Sbjct: 358 ATSPIS 363
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 80/145 (55%), Gaps = 32/145 (22%)
Query: 653 TAAGCKLFGFSLTSETP----------------------TPSSQSPGK-----RSCTKVH 685
T +LFGF LTS +P TP+S S K RS TKV
Sbjct: 436 TNCSYRLFGFDLTSNSPAPIPQDKQPMDTCGAAKCQEPITPTSMSEQKKQQTSRSRTKVQ 495
Query: 686 KQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEG--LLRDPAKGWRILYTDSENDVMVVGD 743
QG VGRA+DL L Y++L+ ELE +F ++G L RD W +++TD E D+M+ GD
Sbjct: 496 MQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLLARD---KWIVVFTDDEGDMMLAGD 552
Query: 744 DPWHEFCNEVSKIHIYTQEEVEKMT 768
DPW+EFC KI IY+ +EV+KMT
Sbjct: 553 DPWNEFCKMAKKIFIYSSDEVKKMT 577
>gi|297745485|emb|CBI40565.3| unnamed protein product [Vitis vinifera]
Length = 607
Score = 358 bits (919), Expect = 7e-96, Method: Compositional matrix adjust.
Identities = 185/383 (48%), Positives = 250/383 (65%), Gaps = 22/383 (5%)
Query: 54 SSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFC 112
S ++ ELW ACAGPL +PK V YFPQGH+EQ+ AS++ +P F+L +I C
Sbjct: 17 SDHLFTELWRACAGPLVDVPKPHERVFYFPQGHMEQLQASTNQGVDQRIPLFNLPSKILC 76
Query: 113 KVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMF 172
+VV +LLA +E DEVY Q+ L P EA Q E D +P K T H F
Sbjct: 77 RVVHTRLLAEQETDEVYAQITLQP---------EADQTEPKSPDS-CPDEAP-KQTVHSF 125
Query: 173 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQP 232
CK LTASDTSTHGGFSV R+ A +C PPLD Q P+QELVA+DLHG EWRF+HI+RGQP
Sbjct: 126 CKILTASDTSTHGGFSVLRKHANECLPPLDMSQATPTQELVARDLHGYEWRFKHIFRGQP 185
Query: 233 RRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYP 292
RRHLLTTGWS FV+ K LV+GDA +FLRG +GELR+G+RR + ++ +P S++S Q+ +
Sbjct: 186 RRHLLTTGWSTFVTSKRLVAGDAFVFLRGDNGELRVGVRRLARQQSPMPSSVISSQSMHL 245
Query: 293 NVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSP 352
VL+ ++AV+T+++F V+Y PR + F+I KY++ + +G RFKMRFE +DSP
Sbjct: 246 GVLATASHAVTTQTLFVVYYKPRTSQ--FIISLNKYLEAVNYGFAVGMRFKMRFEGEDSP 303
Query: 353 ERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQ 412
ERR G + GI D+ P +W NSKWR L ++WDE E+VS W+I+ V+ L++
Sbjct: 304 ERRFTGTIVGIGDISP-QWSNSKWRSLKIQWDEPATIQRPERVSSWDIEPFVASASLNLT 362
Query: 413 SSP-RMKKLRTGLQAPPPDYPVS 434
P ++K+ R P D PV+
Sbjct: 363 QPPVKIKRPR------PLDLPVA 379
Score = 109 bits (272), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 62/167 (37%), Positives = 88/167 (52%), Gaps = 35/167 (20%)
Query: 653 TAAGCKLFGFSLTSETPTPS--------------------------SQSPGKRSCT---- 682
++ GC+LFG LT+ + + ++ G++SCT
Sbjct: 432 SSIGCRLFGIDLTNNSKATALLEMIQNLDVSKSSNEQKQVVPEASQKETQGRQSCTPSSR 491
Query: 683 ----KVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDV 738
KV QG VGRA+DL L GY++L+SELE +F ++G L P W +++TD E D+
Sbjct: 492 TRTKKVQMQGVAVGRAVDLTALEGYDELISELEKMFEIKGEL-CPRNKWEVVFTDDEGDM 550
Query: 739 MVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGTTDDTQSCLDQAPVI 785
M+VGDDPW EFC V KI IY+ EEV+KM+ T S + VI
Sbjct: 551 MLVGDDPWQEFCKMVRKIFIYSSEEVKKMSPRCKLSTSSLDGEGTVI 597
>gi|413916383|gb|AFW56315.1| hypothetical protein ZEAMMB73_567315 [Zea mays]
Length = 826
Score = 358 bits (918), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 183/383 (47%), Positives = 253/383 (66%), Gaps = 13/383 (3%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIE--VPNFDLQPQIFCK 113
+++ ELW ACAGPL+S+P G V YFPQGH+EQV +S+ P ++L +I CK
Sbjct: 27 ALFVELWKACAGPLSSVPLLGEKVYYFPQGHIEQVEASTNHLAEHQGTPLYNLPWKIPCK 86
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTP---H 170
+++++L A + DEVY Q+ LLP + + N A+ + +E P S H
Sbjct: 87 LMNMELKAEPDTDEVYAQLTLLPDKK-QDENTSARVENEEAEEEVVPHVPPATSEGLRIH 145
Query: 171 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRG 230
FCKTLTASDTSTHGGFSV RR A++C PPLD Q P+QELVAKDLHGVEWRFRHI+RG
Sbjct: 146 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGVEWRFRHIFRG 205
Query: 231 QPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNS 290
QPRRHLL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++ + +P S++S +
Sbjct: 206 QPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHSM 265
Query: 291 YPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDD 350
+ VL+ +AV+T SMF V+Y PR + A+FV+ +Y + + IG RF+MRFE ++
Sbjct: 266 HLGVLATAWHAVNTGSMFTVYYKPRTSPAEFVVSRARYCESLKRNYSIGMRFRMRFEGEE 325
Query: 351 SPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS---LP 407
+ E+R G + GI DP W +SKWR L VRWDE E+VSPW+I+ +VS +
Sbjct: 326 AAEQRFTGTIVGICVSDPSGWADSKWRSLKVRWDEASSVPRPERVSPWQIEPAVSPSPVN 385
Query: 408 PLSIQSSPRMKKLRTGLQAPPPD 430
PL + R K+ R+ + A P D
Sbjct: 386 PLPV----RFKRSRSSVNASPSD 404
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 89/136 (65%), Gaps = 8/136 (5%)
Query: 674 QSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTD 733
QS RSC KVHKQGS +GR+IDL + Y++L++EL+ +F+ +G L+ P + W ++YTD
Sbjct: 674 QSSSTRSCKKVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDGELKSPCRNWLVVYTD 733
Query: 734 SENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGTTD-DTQSCLDQAPVIMEVSVSK 792
+E D+M+VGDDPW+EFC+ V KI IYT+EEVE+M G + + CL S+ +
Sbjct: 734 NEGDMMLVGDDPWNEFCDMVHKIFIYTREEVERMNPGALNARLEDCLSD-------SLGR 786
Query: 793 SSSVSQPDSSPTVVRV 808
+ +P S P+ V
Sbjct: 787 GLASKEPRSGPSTSAV 802
>gi|301793221|emb|CBA12001.1| putative auxin response factor 8 [Illicium parviflorum]
Length = 794
Score = 358 bits (918), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 192/377 (50%), Positives = 251/377 (66%), Gaps = 17/377 (4%)
Query: 34 LNSSSSSSSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVA-S 92
L+SSSS SL+S ELWHACAGPL SLP G+ VVYFPQGH EQVA S
Sbjct: 3 LSSSSSGIVQPGQEGEKKSLNS----ELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVS 58
Query: 93 SSAFPPIEVPNF-DLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLE 151
++ +PN+ L PQ+ C++ +V + A+ E DEVY Q+ L P L ++ +
Sbjct: 59 TNKEVNGHIPNYPSLSPQLICQLHNVTMHADMETDEVYAQMTLQP--------LNQQEQK 110
Query: 152 DLGVDEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQE 211
D + E G P+K + FCKTLTASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QE
Sbjct: 111 DSYLPAELG--VPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQE 168
Query: 212 LVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIR 271
LVA+DLH VEW+FRHI+RGQP+RHLLTTGWS+FVS K LV+GD+VLF+ + +L LGIR
Sbjct: 169 LVARDLHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIR 228
Query: 272 RSVQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKI 331
R+ +P+ +P S+LS + + +L+ A+A +T S F +FY+PRA+ ++FVIP KY K
Sbjct: 229 RASRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLSKYAKA 288
Query: 332 IMNP-ICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSD 390
+ + I RF+M FE D+S RR G +TGI+DLDP RW NS WR + V WDE +
Sbjct: 289 VFHTRISDDMRFRMLFETDESSVRRYMGRITGISDLDPVRWSNSHWRSVKVIWDESTAGE 348
Query: 391 HQEQVSPWEIDRSVSLP 407
Q +VS WEI+ + P
Sbjct: 349 RQPRVSLWEIEPLTTFP 365
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 63/93 (67%), Gaps = 2/93 (2%)
Query: 676 PGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDS 734
P R+ KV+K GS VGR++D+ + + Y++L EL +F + G LRDP + GW++++ D
Sbjct: 665 PPTRTFVKVYKSGS-VGRSLDIAQFSSYHELREELGQMFGLGGKLRDPLRSGWQLVFVDR 723
Query: 735 ENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
ENDV+++GDDPW F N V I I + ++V+ M
Sbjct: 724 ENDVLLLGDDPWESFVNNVWYIKILSPDDVQNM 756
>gi|312281961|dbj|BAJ33846.1| unnamed protein product [Thellungiella halophila]
Length = 801
Score = 358 bits (918), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 181/352 (51%), Positives = 242/352 (68%), Gaps = 15/352 (4%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIE--VPNF-DLQPQIFCKVVD 116
ELWHACAGPL SLP G+ VVYFPQGH EQVA+++ +E +PN+ L PQ+ C++ +
Sbjct: 23 ELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTN-KEVEGHIPNYPSLPPQLICQLHN 81
Query: 117 VQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTL 176
V + A+ E DEVY Q+ L P L ++ +D V E G P+K + FCKTL
Sbjct: 82 VTMHADVETDEVYAQMVLQP--------LTQEEQKDTFVPIELG--IPSKQPSNYFCKTL 131
Query: 177 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHL 236
TASDTSTHGGFSVPRRAAE FPPLDY QQ P+QEL+A+DLH EW+FRHI+RGQP+RHL
Sbjct: 132 TASDTSTHGGFSVPRRAAEKVFPPLDYTQQPPAQELIARDLHDNEWKFRHIFRGQPKRHL 191
Query: 237 LTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLS 296
LTTGWS+FVS K LV+GD+V+F+R + +L LGIR + +P+ +P S+LS + + +L+
Sbjct: 192 LTTGWSVFVSAKRLVTGDSVIFIRNERNQLLLGIRHASRPQTIVPSSMLSSDSMHIGLLA 251
Query: 297 VVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERR 355
A+A +T S F VFY PR++ ++FV+P KY+K + + I +G RF+M FE ++S RR
Sbjct: 252 AAAHAAATNSCFTVFYHPRSSSSEFVLPLPKYIKAVFHTRISVGMRFRMLFETEESSVRR 311
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI DLD RWPNS WR + V WDE + Q + S WEI+ + P
Sbjct: 312 YMGTITGIGDLDSVRWPNSHWRSVKVGWDESTAGERQARASLWEIEPLTTFP 363
Score = 86.7 bits (213), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 64/90 (71%), Gaps = 2/90 (2%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSEND 737
++ KV+K GS VGR++D+ R + Y++L EL +F+++GLL D + GW++++ D E+D
Sbjct: 694 KNFVKVYKSGS-VGRSLDISRFSSYHELREELGKMFDIKGLLEDAFRSGWQLVFVDKEDD 752
Query: 738 VMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
V+++GDDPW F N V I I + E+V+KM
Sbjct: 753 VLLLGDDPWESFVNSVWYIKILSPEDVQKM 782
>gi|168034767|ref|XP_001769883.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678789|gb|EDQ65243.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 411
Score = 358 bits (918), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 185/346 (53%), Positives = 235/346 (67%), Gaps = 15/346 (4%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVA-SSSAFPPIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA S+ I +PN+ +L+P + C + +V
Sbjct: 38 ELWHACAGPLVSLPPVGSQVVYFPQGHSEQVAVSTQKEADIHIPNYPNLRPHLICTLENV 97
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
L A+ E D+VY Q+ L+P + E E L D+ V + PT+ FCKTLT
Sbjct: 98 TLHADLETDDVYAQMVLIPTQDPEK---ETMLLPDVVVQ----NKQPTE----YFCKTLT 146
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR-GQPRRHL 236
ASDTSTHGGFS+PRRAAE FP LDY QQ P+QELVA+DLH +W FRHIYR GQPRRHL
Sbjct: 147 ASDTSTHGGFSIPRRAAEKVFPTLDYTQQPPAQELVARDLHDQDWHFRHIYRAGQPRRHL 206
Query: 237 LTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLS 296
LTTGWSIF+S K L +GDAVLF+R G+L LGIRR+ + + +P S+LS + + +L+
Sbjct: 207 LTTGWSIFISAKRLQAGDAVLFIRDDKGQLLLGIRRANRLQTIMPSSVLSSDSMHIGILA 266
Query: 297 VVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERR 355
++A T S F +FY+PR + ++FVIP KY K + + I +G RF+M FE ++S RR
Sbjct: 267 AASHAAQTSSRFTIFYNPRQSPSEFVIPSAKYQKAVYSTQITVGMRFRMMFETEESTVRR 326
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
G VTGI DLDP RWPNS WR L V WDE + Q +VS WEI+
Sbjct: 327 YMGTVTGIGDLDPVRWPNSHWRSLKVGWDESTAGERQRRVSLWEIE 372
>gi|302398563|gb|ADL36576.1| ARF domain class transcription factor [Malus x domestica]
Length = 895
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 183/351 (52%), Positives = 241/351 (68%), Gaps = 13/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G VVYFPQGH EQVA+S+ +PN L PQ+ C++ +V
Sbjct: 23 ELWHACAGPLVSLPAVGTRVVYFPQGHSEQVAASTNKEVDAHIPNHPSLPPQLICQLHNV 82
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L ++ +D G G G SP K + FCKTLT
Sbjct: 83 TMHADVETDEVYAQMTLQP--------LNPQEQKD-GYLPAGLG-SPNKQPTNYFCKTLT 132
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+A+DLH EW+FRHI+RGQP+RHLL
Sbjct: 133 ASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLL 192
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+VLF+ + +L LGIRR+ + + +P S+LS + + +L+
Sbjct: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRQQTVMPSSVLSSDSMHLGLLAA 252
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F +FY+PRA+ ++FVIP KY+K + + I +G RF+M FE ++S RR
Sbjct: 253 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYIKAVYHTCISVGMRFRMLFETEESSVRRY 312
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI+DLDP RWPNS WR + V WDE + Q +VS WE++ + P
Sbjct: 313 MGTITGISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEVEPLTTFP 363
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 64/93 (68%), Gaps = 2/93 (2%)
Query: 676 PGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDS 734
P R+ KV+K GS GR++D+ + + Y +L +EL +F +EG L DP + GW++++ D
Sbjct: 759 PLNRNFVKVYKSGSF-GRSLDITKFSSYQELRNELARMFGLEGKLDDPVRSGWQLVFVDR 817
Query: 735 ENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
ENDV+++GDDPW EF N V I I + +EV++M
Sbjct: 818 ENDVLLLGDDPWPEFVNSVWCIKILSPQEVQQM 850
>gi|242092304|ref|XP_002436642.1| hypothetical protein SORBIDRAFT_10g006440 [Sorghum bicolor]
gi|241914865|gb|EER88009.1| hypothetical protein SORBIDRAFT_10g006440 [Sorghum bicolor]
Length = 952
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 179/346 (51%), Positives = 238/346 (68%), Gaps = 11/346 (3%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNF-DLQPQIFCKVV 115
I ELWHACAGPL SLP G++VVYFPQGH EQVA+S +P++ L ++ CK++
Sbjct: 21 INSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELDTIPSYPSLPSKLICKLL 80
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKT 175
+ L A+ E DEVY Q+ L P + + +A +LG+ + + PT+ FCKT
Sbjct: 81 SLTLHADSETDEVYAQMTLQP---VNKYDRDAMLASELGLKQ---NKQPTE----FFCKT 130
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
LTASDTSTHGGFSVPRRAAE FPPLD+ Q P+QEL+AKDLH + W+FRHIYRGQP+RH
Sbjct: 131 LTASDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRH 190
Query: 236 LLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVL 295
LLTTGWS+FVS K L++GD+VLF+R + +L LGIRR+ +P+ L S+LS + + +L
Sbjct: 191 LLTTGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRASRPQPALSSSVLSCDSMHIGIL 250
Query: 296 SVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERR 355
+ A+A + S F +FY+PRA+ ++FVIP KY K + + +G RF+M FE +DS RR
Sbjct: 251 AAAAHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVRR 310
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
G +TGI DLDP RW NS WR L V WDE S+ + +VS WEI+
Sbjct: 311 YMGTITGIGDLDPLRWKNSHWRNLQVGWDESTASERRTRVSIWEIE 356
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 73/112 (65%), Gaps = 6/112 (5%)
Query: 672 SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRIL 730
+SQ+ R+ TKV K+GS VGR+ID+ R GY DL +L +F ++G L DP + W+++
Sbjct: 831 NSQTQRMRTFTKVQKRGS-VGRSIDITRYRGYEDLRHDLACMFGIQGQLEDPYRTDWKLV 889
Query: 731 YTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT----IGTTDDTQSC 778
Y D END+++VGDDPW EF + V I I + EV++M+ +G TQ+C
Sbjct: 890 YVDHENDILLVGDDPWEEFVSCVKSIKILSSAEVQQMSLDGDLGCIPQTQAC 941
>gi|293337297|ref|NP_001169329.1| uncharacterized protein LOC100383196 [Zea mays]
gi|224028731|gb|ACN33441.1| unknown [Zea mays]
gi|407232688|gb|AFT82686.1| ARF28 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|413916381|gb|AFW56313.1| hypothetical protein ZEAMMB73_567315 [Zea mays]
gi|413916382|gb|AFW56314.1| hypothetical protein ZEAMMB73_567315 [Zea mays]
Length = 813
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 183/383 (47%), Positives = 253/383 (66%), Gaps = 13/383 (3%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIE--VPNFDLQPQIFCK 113
+++ ELW ACAGPL+S+P G V YFPQGH+EQV +S+ P ++L +I CK
Sbjct: 27 ALFVELWKACAGPLSSVPLLGEKVYYFPQGHIEQVEASTNHLAEHQGTPLYNLPWKIPCK 86
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTP---H 170
+++++L A + DEVY Q+ LLP + + N A+ + +E P S H
Sbjct: 87 LMNMELKAEPDTDEVYAQLTLLPDKK-QDENTSARVENEEAEEEVVPHVPPATSEGLRIH 145
Query: 171 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRG 230
FCKTLTASDTSTHGGFSV RR A++C PPLD Q P+QELVAKDLHGVEWRFRHI+RG
Sbjct: 146 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGVEWRFRHIFRG 205
Query: 231 QPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNS 290
QPRRHLL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++ + +P S++S +
Sbjct: 206 QPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHSM 265
Query: 291 YPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDD 350
+ VL+ +AV+T SMF V+Y PR + A+FV+ +Y + + IG RF+MRFE ++
Sbjct: 266 HLGVLATAWHAVNTGSMFTVYYKPRTSPAEFVVSRARYCESLKRNYSIGMRFRMRFEGEE 325
Query: 351 SPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS---LP 407
+ E+R G + GI DP W +SKWR L VRWDE E+VSPW+I+ +VS +
Sbjct: 326 AAEQRFTGTIVGICVSDPSGWADSKWRSLKVRWDEASSVPRPERVSPWQIEPAVSPSPVN 385
Query: 408 PLSIQSSPRMKKLRTGLQAPPPD 430
PL + R K+ R+ + A P D
Sbjct: 386 PLPV----RFKRSRSSVNASPSD 404
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 89/136 (65%), Gaps = 8/136 (5%)
Query: 674 QSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTD 733
QS RSC KVHKQGS +GR+IDL + Y++L++EL+ +F+ +G L+ P + W ++YTD
Sbjct: 674 QSSSTRSCKKVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDGELKSPCRNWLVVYTD 733
Query: 734 SENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGTTD-DTQSCLDQAPVIMEVSVSK 792
+E D+M+VGDDPW+EFC+ V KI IYT+EEVE+M G + + CL S+ +
Sbjct: 734 NEGDMMLVGDDPWNEFCDMVHKIFIYTREEVERMNPGALNARLEDCLSD-------SLGR 786
Query: 793 SSSVSQPDSSPTVVRV 808
+ +P S P+ V
Sbjct: 787 GLASKEPRSGPSTSAV 802
>gi|359489584|ref|XP_002264072.2| PREDICTED: auxin response factor 18-like [Vitis vinifera]
Length = 764
Score = 357 bits (917), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 184/384 (47%), Positives = 251/384 (65%), Gaps = 22/384 (5%)
Query: 53 LSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIF 111
+S ++ +LW ACAGPL +PK V YFPQGH+EQ+ AS++ +P F+L +I
Sbjct: 79 ISEAVSSQLWRACAGPLVDVPKPHERVFYFPQGHMEQLQASTNQGVDQRIPLFNLPSKIL 138
Query: 112 CKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHM 171
C+VV +LLA +E DEVY Q+ L P EA Q E D +P K T H
Sbjct: 139 CRVVHTRLLAEQETDEVYAQITLQP---------EADQTEPKSPDS-CPDEAP-KQTVHS 187
Query: 172 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQ 231
FCK LTASDTSTHGGFSV R+ A +C PPLD Q P+QELVA+DLHG EWRF+HI+RGQ
Sbjct: 188 FCKILTASDTSTHGGFSVLRKHANECLPPLDMSQATPTQELVARDLHGYEWRFKHIFRGQ 247
Query: 232 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSY 291
PRRHLLTTGWS FV+ K LV+GDA +FLRG +GELR+G+RR + ++ +P S++S Q+ +
Sbjct: 248 PRRHLLTTGWSTFVTSKRLVAGDAFVFLRGDNGELRVGVRRLARQQSPMPSSVISSQSMH 307
Query: 292 PNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDS 351
VL+ ++AV+T+++F V+Y PR + F+I KY++ + +G RFKMRFE +DS
Sbjct: 308 LGVLATASHAVTTQTLFVVYYKPRTSQ--FIISLNKYLEAVNYGFAVGMRFKMRFEGEDS 365
Query: 352 PERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSI 411
PERR G + GI D+ P +W NSKWR L ++WDE E+VS W+I+ V+ L++
Sbjct: 366 PERRFTGTIVGIGDISP-QWSNSKWRSLKIQWDEPATIQRPERVSSWDIEPFVASASLNL 424
Query: 412 QSSP-RMKKLRTGLQAPPPDYPVS 434
P ++K+ R P D PV+
Sbjct: 425 TQPPVKIKRPR------PLDLPVA 442
Score = 111 bits (277), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/119 (47%), Positives = 75/119 (63%), Gaps = 1/119 (0%)
Query: 667 ETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKG 726
ET S +P R+ TKV QG VGRA+DL L GY++L+SELE +F ++G L P
Sbjct: 637 ETQGRQSCTPSSRTRTKVQMQGVAVGRAVDLTALEGYDELISELEKMFEIKGEL-CPRNK 695
Query: 727 WRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGTTDDTQSCLDQAPVI 785
W +++TD E D+M+VGDDPW EFC V KI IY+ EEV+KM+ T S + VI
Sbjct: 696 WEVVFTDDEGDMMLVGDDPWQEFCKMVRKIFIYSSEEVKKMSPRCKLSTSSLDGEGTVI 754
>gi|449518891|ref|XP_004166469.1| PREDICTED: auxin response factor 6-like [Cucumis sativus]
Length = 916
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 179/351 (50%), Positives = 245/351 (69%), Gaps = 13/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVA-SSSAFPPIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA S++ +P++ L PQ+ C++ +V
Sbjct: 23 ELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAISTNREVDAHIPSYPSLPPQLICQLHNV 82
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L A++ ++ + E G +P+K + FCKTLT
Sbjct: 83 TMHADIETDEVYAQMTLQP--------LTAQEQKEPYLPAELG--APSKQPTNYFCKTLT 132
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+A+DLH EW+FRHI+RGQP+RHLL
Sbjct: 133 ASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLL 192
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+V+F+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 193 TTGWSVFVSAKRLVAGDSVIFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAA 252
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F +FY+PRA+ ++F+IP KYVK + + + +G RF+M FE ++S RR
Sbjct: 253 AAHAAATNSRFTIFYNPRASPSEFIIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRY 312
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI+DLD RWPNS WR + V WDE + Q +VS WEI+ + P
Sbjct: 313 MGTITGISDLDSTRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 65/94 (69%), Gaps = 2/94 (2%)
Query: 675 SPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTD 733
+P R+ KV+K GS GR++D+ + + Y+ L SEL H+F +EG L DP + GW++++ D
Sbjct: 778 NPPTRTFVKVYKSGSF-GRSLDISKFSSYHQLRSELAHMFGLEGELEDPLRSGWQLVFVD 836
Query: 734 SENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
ENDV+++GDDPW EF N V I I + +EV+ M
Sbjct: 837 RENDVLLLGDDPWPEFVNSVWCIKILSPQEVQDM 870
>gi|308044209|ref|NP_001183794.1| hypothetical protein [Zea mays]
gi|238014578|gb|ACR38324.1| unknown [Zea mays]
gi|413952427|gb|AFW85076.1| hypothetical protein ZEAMMB73_374158 [Zea mays]
Length = 340
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 173/328 (52%), Positives = 228/328 (69%), Gaps = 21/328 (6%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
ELWHACAGP+ +LP++G++VVY PQGHL DL P + C+V DV+L
Sbjct: 24 ELWHACAGPVVALPRRGSLVVYLPQGHLAAAGGGDV-------AADLPPHVVCRVADVEL 76
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQ------LEDLGVDEEGGGRSPTKSTPHMFC 173
A+ DEV ++AL+ + E G NL +ED + + G HMFC
Sbjct: 77 CADAATDEVCARLALVAEGEAFGRNLGGGGVEGDDGMEDFDAERKSG-------MLHMFC 129
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
KTLTASDTSTHGGFSVPRRAAEDCFPPLDY Q RPSQELVAKDLHG +W+FRHIYRGQPR
Sbjct: 130 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYNQLRPSQELVAKDLHGAKWKFRHIYRGQPR 189
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
RHLLTTGWS FV++K LVSGDAVLFLRG DGELRLG+RR++Q +N + ++ +
Sbjct: 190 RHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALFEDFNSDSTKRH 249
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
L+ VA+++ +S+FH+ Y+PRAT ++++IPY K++K + +P+CIG R + +D E
Sbjct: 250 SLTAVADSLKNRSVFHISYNPRATASEYIIPYAKFLKSLNHPVCIGARINFQCHNEDVSE 309
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMV 381
RR +GVV I+++DP +WP SKWR L++
Sbjct: 310 RR-SGVVVRISEIDPMKWPGSKWRSLLM 336
>gi|224072482|ref|XP_002303753.1| predicted protein [Populus trichocarpa]
gi|222841185|gb|EEE78732.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 176/356 (49%), Positives = 244/356 (68%), Gaps = 13/356 (3%)
Query: 68 PLTSLPKKGNVVVYFPQGHLEQVASSS--AFPPIEVPNFDLQPQIFCKVVDVQLLANKEN 125
PL ++P++G +V YFPQGH+EQV +S+ ++P ++L P+I C+VV+VQL A +
Sbjct: 4 PLVTVPRQGELVYYFPQGHIEQVEASTNQVADDQQMPAYNLSPKILCRVVNVQLKAELDT 63
Query: 126 DEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASDTSTHG 185
DEV+ QV LLP E +Q +L V+EE P + H FCK LTASDTSTHG
Sbjct: 64 DEVFAQVILLP---------ETQQDVEL-VEEEDLPPLPARPRVHSFCKMLTASDTSTHG 113
Query: 186 GFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFV 245
GFSV +R A++C PPLD Q P QELVAKDLHG EWRFRHI+RGQPRRHLL +GWS+FV
Sbjct: 114 GFSVLKRHADECLPPLDMSLQPPVQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSLFV 173
Query: 246 SQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVANAVSTK 305
S K LV+GDA +FLRG+ ELR+G+RR+++ + +P S++S + + +L+ +AVST
Sbjct: 174 SAKKLVAGDAFIFLRGETEELRVGVRRALRQPSKIPSSLISSHSMHIGILATAWHAVSTG 233
Query: 306 SMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCNGVVTGITD 365
SMF V+Y PR + A+F+IP KY++ + IG RFKMRFE DD+PE+R +G V G+ +
Sbjct: 234 SMFTVYYKPRTSPAEFIIPVDKYMESVKINYAIGMRFKMRFEADDAPEQRFSGTVIGVEE 293
Query: 366 LDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLR 421
DP +WP S WRCL V WDE ++VSPW+++ +++ P + S R+K+ R
Sbjct: 294 ADPKKWPRSNWRCLKVHWDETSPVHRPDRVSPWKVEPALA-PSMDPVSGCRLKRHR 348
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 67/89 (75%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDV 738
R C KVHKQG+ VGR++DL + NGYN+L +EL+ +F G L P K W I++TD E+D+
Sbjct: 609 RRCVKVHKQGTAVGRSLDLSKFNGYNELTAELDQIFEFNGELVAPNKDWLIVFTDDEDDM 668
Query: 739 MVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
M+VGDDPW EFC+ V +I IYT+EE+ +M
Sbjct: 669 MLVGDDPWQEFCSMVRRIFIYTKEEINRM 697
>gi|449433545|ref|XP_004134558.1| PREDICTED: auxin response factor 6-like [Cucumis sativus]
Length = 902
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 179/351 (50%), Positives = 245/351 (69%), Gaps = 13/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVA-SSSAFPPIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA S++ +P++ L PQ+ C++ +V
Sbjct: 25 ELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAISTNREVDAHIPSYPSLPPQLICQLHNV 84
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L A++ ++ + E G +P+K + FCKTLT
Sbjct: 85 TMHADIETDEVYAQMTLQP--------LTAQEQKEPYLPAELG--APSKQPTNYFCKTLT 134
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+A+DLH EW+FRHI+RGQP+RHLL
Sbjct: 135 ASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLL 194
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+V+F+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 195 TTGWSVFVSAKRLVAGDSVIFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAA 254
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F +FY+PRA+ ++F+IP KYVK + + + +G RF+M FE ++S RR
Sbjct: 255 AAHAAATNSRFTIFYNPRASPSEFIIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRY 314
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI+DLD RWPNS WR + V WDE + Q +VS WEI+ + P
Sbjct: 315 MGTITGISDLDSTRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 365
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 65/94 (69%), Gaps = 2/94 (2%)
Query: 675 SPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTD 733
+P R+ KV+K GS GR++D+ + + Y+ L SEL H+F +EG L DP + GW++++ D
Sbjct: 764 NPPTRTFVKVYKSGSF-GRSLDISKFSSYHQLRSELAHMFGLEGELEDPLRSGWQLVFVD 822
Query: 734 SENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
ENDV+++GDDPW EF N V I I + +EV+ M
Sbjct: 823 RENDVLLLGDDPWPEFVNSVWCIKILSPQEVQDM 856
>gi|145334653|ref|NP_001078672.1| auxin response factor 8 [Arabidopsis thaliana]
gi|332006755|gb|AED94138.1| auxin response factor 8 [Arabidopsis thaliana]
Length = 773
Score = 357 bits (916), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 180/351 (51%), Positives = 241/351 (68%), Gaps = 13/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA+++ +PN+ L PQ+ C++ +V
Sbjct: 22 ELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLICQLHNV 81
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L ++ ++ V E G P+K + FCKTLT
Sbjct: 82 TMHADVETDEVYAQMTLQP--------LTPEEQKETFVPIELG--IPSKQPSNYFCKTLT 131
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLDY Q P+QEL+A+DLH VEW+FRHI+RGQP+RHLL
Sbjct: 132 ASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 191
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+V+F+R + +L LGIR + +P+ +P S+LS + + +L+
Sbjct: 192 TTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVLSSDSMHIGLLAA 251
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F VF+ PRA+ ++FVI KY+K + + I +G RF+M FE ++S RR
Sbjct: 252 AAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEESSVRRY 311
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI+DLD RWPNS WR + V WDE + Q +VS WEI+ + P
Sbjct: 312 MGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 362
Score = 75.9 bits (185), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 32/69 (46%), Positives = 52/69 (75%), Gaps = 2/69 (2%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSEND 737
++ KV+K GS VGR++D+ R + Y++L EL +F +EGLL DP + GW++++ D END
Sbjct: 705 KNFVKVYKSGS-VGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVDKEND 763
Query: 738 VMVVGDDPW 746
++++GDDPW
Sbjct: 764 ILLLGDDPW 772
>gi|223973945|gb|ACN31160.1| unknown [Zea mays]
gi|408690390|gb|AFU81655.1| ARF-type transcription factor, partial [Zea mays subsp. mays]
gi|413937283|gb|AFW71834.1| auxin response factor 1 [Zea mays]
Length = 677
Score = 357 bits (916), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 179/366 (48%), Positives = 243/366 (66%), Gaps = 18/366 (4%)
Query: 50 SSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQP 108
S S +++ ELWHACAGPL ++P++G +V YFPQGH+EQ+ AS+ +P F+L
Sbjct: 10 SGSAGDALFRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLFNLPH 69
Query: 109 QIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKST 168
+I CKVV+V+L A ++DEVY Q+ L PQ E + + P +
Sbjct: 70 KILCKVVNVELRAETDSDEVYAQIMLQPQTE-----------QSEPTSPDPEPPEPERCN 118
Query: 169 PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIY 228
H FCKTLTASDTSTHGGFSV RR AE+C P LD Q P QELVAKDLHG EW FRHI+
Sbjct: 119 IHSFCKTLTASDTSTHGGFSVLRRHAEECLPQLDMTQNPPWQELVAKDLHGNEWHFRHIF 178
Query: 229 RGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQ 288
RGQPRRHLLTTGWS+FVS K LV+GDA +FLRG++GELR+G+RR ++ N +P S++S
Sbjct: 179 RGQPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSH 238
Query: 289 NSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEM 348
+ + VL+ ++A+ST ++F VFY PR + ++FV+ KY++ + + +G RFKMRFE
Sbjct: 239 SMHLGVLATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKNHKMSVGMRFKMRFEG 298
Query: 349 DDSPERRCNGVVTGITDLDPYR---WPNSKWRCLMVRWDECIGSDHQEQVSPWEI---DR 402
D+SPERR +G + G+ + W NS+WR L V+WDE ++VSPWE+ DR
Sbjct: 299 DESPERRFSGTIIGMGCMPANSTSPWANSEWRSLKVQWDEPSAILRPDRVSPWEVEPLDR 358
Query: 403 SVSLPP 408
+ PP
Sbjct: 359 TNPQPP 364
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 50/96 (52%), Positives = 70/96 (72%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYT 732
++S RSCTKV QG VGRA+DL RL+GY+DL +LE +F++ G L K W+++YT
Sbjct: 539 TESRQARSCTKVIMQGVAVGRAVDLTRLDGYDDLRRKLEEMFDIPGELSASLKKWKVIYT 598
Query: 733 DSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
D E+D+M+VGDDPW EFC V +I+IY+ EE + +T
Sbjct: 599 DDEDDMMLVGDDPWSEFCRMVKRIYIYSYEEAKSLT 634
>gi|47496696|dbj|BAD19063.1| auxin response factor 3 [Cucumis sativus]
Length = 916
Score = 357 bits (916), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 179/351 (50%), Positives = 245/351 (69%), Gaps = 13/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVA-SSSAFPPIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA S++ +P++ L PQ+ C++ +V
Sbjct: 23 ELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAISTNREVDAHIPSYPSLPPQLICQLHNV 82
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L A++ ++ + E G +P+K + FCKTLT
Sbjct: 83 TMHADIETDEVYAQMTLQP--------LTAQEQKEPYLPAELG--APSKQPTNYFCKTLT 132
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+A+DLH EW+FRHI+RGQP+RHLL
Sbjct: 133 ASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLL 192
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+V+F+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 193 TTGWSVFVSAKRLVAGDSVIFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHLGLLAA 252
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F +FY+PRA+ ++F+IP KYVK + + + +G RF+M FE ++S RR
Sbjct: 253 AAHAAATNSRFTIFYNPRASPSEFIIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRY 312
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI+DLD RWPNS WR + V WDE + Q +VS WEI+ + P
Sbjct: 313 MGTITGISDLDSTRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 64/94 (68%), Gaps = 2/94 (2%)
Query: 675 SPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTD 733
+P + KV+K GS GR++D+ + + Y+ L SEL H+F +EG L DP + GW++++ D
Sbjct: 778 NPPTTTFVKVYKSGSF-GRSLDISKFSRYHQLRSELAHMFGLEGELEDPLRSGWQLVFVD 836
Query: 734 SENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
ENDV+++GDDPW EF N V I I + +EV+ M
Sbjct: 837 RENDVLLLGDDPWPEFVNSVWCIKILSPQEVQDM 870
>gi|15239481|ref|NP_198518.1| auxin response factor 8 [Arabidopsis thaliana]
gi|46576647|sp|Q9FGV1.2|ARFH_ARATH RecName: Full=Auxin response factor 8; AltName: Full=Protein FRUIT
WITHOUT FERTILIZATION
gi|4104931|gb|AAD02219.1| auxin response factor 8 [Arabidopsis thaliana]
gi|49616355|gb|AAT67074.1| ARF8 [Arabidopsis thaliana]
gi|332006754|gb|AED94137.1| auxin response factor 8 [Arabidopsis thaliana]
Length = 811
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 180/351 (51%), Positives = 241/351 (68%), Gaps = 13/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA+++ +PN+ L PQ+ C++ +V
Sbjct: 22 ELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLICQLHNV 81
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L ++ ++ V E G P+K + FCKTLT
Sbjct: 82 TMHADVETDEVYAQMTLQP--------LTPEEQKETFVPIELG--IPSKQPSNYFCKTLT 131
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLDY Q P+QEL+A+DLH VEW+FRHI+RGQP+RHLL
Sbjct: 132 ASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 191
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+V+F+R + +L LGIR + +P+ +P S+LS + + +L+
Sbjct: 192 TTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVLSSDSMHIGLLAA 251
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F VF+ PRA+ ++FVI KY+K + + I +G RF+M FE ++S RR
Sbjct: 252 AAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEESSVRRY 311
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI+DLD RWPNS WR + V WDE + Q +VS WEI+ + P
Sbjct: 312 MGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 362
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 63/90 (70%), Gaps = 2/90 (2%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSEND 737
++ KV+K GS VGR++D+ R + Y++L EL +F +EGLL DP + GW++++ D END
Sbjct: 705 KNFVKVYKSGS-VGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVDKEND 763
Query: 738 VMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
++++GDDPW F N V I I + E+V +M
Sbjct: 764 ILLLGDDPWESFVNNVWYIKILSPEDVHQM 793
>gi|118486652|gb|ABK95163.1| unknown [Populus trichocarpa]
Length = 907
Score = 357 bits (915), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 180/351 (51%), Positives = 242/351 (68%), Gaps = 12/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA+S+ +PN+ L PQ+ C++ +V
Sbjct: 27 ELWHACAGPLVSLPHVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQLICQLHNV 86
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L+ + ++ L E G + +K + FCKTLT
Sbjct: 87 TMHADVETDEVYAQMTLQP------LSQDDQKDAYLLPAELG---TASKQPTNYFCKTLT 137
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FP LDY Q P+QEL+A+DLH EW+FRHI+RGQP+RHLL
Sbjct: 138 ASDTSTHGGFSVPRRAAEKVFPTLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLL 197
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+VLF+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 198 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTFMPSSVLSSDSMHIGLLAA 257
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F +FY+PRA+ ++FVIP KY+K + + + +G RF+M FE ++S RR
Sbjct: 258 AAHAAATNSRFTIFYNPRASPSEFVIPLVKYIKAVYHTRVSVGMRFRMLFETEESSVRRY 317
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI+DLDP RWPNS WR + V WDE + Q +VS WEI+ + P
Sbjct: 318 MGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 368
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 66/94 (70%), Gaps = 2/94 (2%)
Query: 675 SPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTD 733
+P R+ KVHK GS GR++D+ + + Y++L SEL LF +EGLL DP + GW++++ D
Sbjct: 770 NPSTRTFVKVHKSGS-YGRSLDISKFSSYDELRSELARLFCLEGLLEDPQRSGWQLVFGD 828
Query: 734 SENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
ENDV+++GDDPW EF N V I I + EV++M
Sbjct: 829 RENDVLLLGDDPWQEFVNNVWYIKILSPLEVQQM 862
>gi|297805254|ref|XP_002870511.1| hypothetical protein ARALYDRAFT_493698 [Arabidopsis lyrata subsp.
lyrata]
gi|297316347|gb|EFH46770.1| hypothetical protein ARALYDRAFT_493698 [Arabidopsis lyrata subsp.
lyrata]
Length = 805
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 180/351 (51%), Positives = 241/351 (68%), Gaps = 13/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA+++ +PN+ L PQ+ C++ +V
Sbjct: 22 ELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLICQLHNV 81
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L ++ ++ V E G P+K + FCKTLT
Sbjct: 82 TMHADVETDEVYAQMTLQP--------LTPEEQKETFVPIELG--IPSKQPSNYFCKTLT 131
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLDY Q P+QEL+A+DLH VEW+FRHI+RGQP+RHLL
Sbjct: 132 ASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 191
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+V+F+R + +L LGIR + +P+ +P S+LS + + +L+
Sbjct: 192 TTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVLSSDSMHIGLLAA 251
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F VF+ PRA+ ++FVI KY+K + + I +G RF+M FE ++S RR
Sbjct: 252 AAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEESSVRRY 311
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI+DLD RWPNS WR + V WDE + Q +VS WEI+ + P
Sbjct: 312 MGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 362
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/132 (37%), Positives = 80/132 (60%), Gaps = 7/132 (5%)
Query: 639 KANMRSHKDGSFNGTAAGCKLFGFSLT--SETPTPSSQSPGKRSCTKVHKQGSLVGRAID 696
+A+ S D F + GC L + PS+Q+ ++ KV+K GS VGR++D
Sbjct: 660 EASPMSLTDSGFQNSLFGCMQDTHELLHGAGQINPSTQT---KNFVKVYKSGS-VGRSLD 715
Query: 697 LWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMVVGDDPWHEFCNEVSK 755
+ R + Y++L EL +F +EGLL DP + GW++++ D END++++GDDPW F N V
Sbjct: 716 ISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVDKENDILLLGDDPWESFVNNVWY 775
Query: 756 IHIYTQEEVEKM 767
I I + E+V++M
Sbjct: 776 IKILSPEDVQQM 787
>gi|9758525|dbj|BAB08972.1| auxin responsive transcription factor [Arabidopsis thaliana]
Length = 821
Score = 356 bits (914), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 180/351 (51%), Positives = 241/351 (68%), Gaps = 13/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA+++ +PN+ L PQ+ C++ +V
Sbjct: 22 ELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAATTNKEVDGHIPNYPSLPPQLICQLHNV 81
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L ++ ++ V E G P+K + FCKTLT
Sbjct: 82 TMHADVETDEVYAQMTLQP--------LTPEEQKETFVPIELG--IPSKQPSNYFCKTLT 131
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLDY Q P+QEL+A+DLH VEW+FRHI+RGQP+RHLL
Sbjct: 132 ASDTSTHGGFSVPRRAAEKVFPPLDYTLQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 191
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+V+F+R + +L LGIR + +P+ +P S+LS + + +L+
Sbjct: 192 TTGWSVFVSAKRLVAGDSVIFIRNEKNQLFLGIRHATRPQTIVPSSVLSSDSMHIGLLAA 251
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F VF+ PRA+ ++FVI KY+K + + I +G RF+M FE ++S RR
Sbjct: 252 AAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEESSVRRY 311
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI+DLD RWPNS WR + V WDE + Q +VS WEI+ + P
Sbjct: 312 MGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 362
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 71/114 (62%), Gaps = 10/114 (8%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSEND 737
++ KV+K GS VGR++D+ R + Y++L EL +F +EGLL DP + GW++++ D END
Sbjct: 705 KNFVKVYKSGS-VGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVDKEND 763
Query: 738 VMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGTTDDT----QSCLDQAPVIME 787
++++GDDPW + ++ E +EK +G + T +SC + ++++
Sbjct: 764 ILLLGDDPWEYYHQKM----CIKWEIMEKAVVGYSRKTRPISRSCFGVSLIMLQ 813
>gi|295844330|gb|ADG43162.1| auxin response factor 28 [Zea mays]
Length = 813
Score = 356 bits (914), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 182/383 (47%), Positives = 253/383 (66%), Gaps = 13/383 (3%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIE--VPNFDLQPQIFCK 113
+++ ELW ACAGPL+S+P G V YFPQGH+EQV +S+ P ++L +I CK
Sbjct: 27 ALFVELWKACAGPLSSVPLLGEKVYYFPQGHIEQVEASTNHLAEHQGTPLYNLPWKIPCK 86
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTP---H 170
+++++L A + DEVY Q+ LLP + + N A+ + +E P S H
Sbjct: 87 LMNMELKAEPDTDEVYAQLTLLPDKK-QDENTSARVENEEAEEEVVPHVPPATSEGLRIH 145
Query: 171 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRG 230
FCKTLTASDTSTHGGFSV RR A++C PPLD Q P+QELVA+DLHGVEWRFRHI+RG
Sbjct: 146 SFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAQDLHGVEWRFRHIFRG 205
Query: 231 QPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNS 290
QPRRHLL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++ + +P S++S +
Sbjct: 206 QPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVISSHSM 265
Query: 291 YPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDD 350
+ VL+ +AV+T SMF V+Y PR + A+FV+ +Y + + IG RF+MRFE ++
Sbjct: 266 HLGVLATAWHAVNTGSMFTVYYKPRTSPAEFVVSRARYCESLKRNYSIGMRFRMRFEGEE 325
Query: 351 SPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS---LP 407
+ E+R G + GI DP W +SKWR L VRWDE E+VSPW+I+ +VS +
Sbjct: 326 AAEQRFTGTIVGICVSDPSGWADSKWRSLKVRWDEASSVPRPERVSPWQIEPAVSPSPVN 385
Query: 408 PLSIQSSPRMKKLRTGLQAPPPD 430
PL + R K+ R+ + A P D
Sbjct: 386 PLPV----RFKRSRSSVNASPSD 404
Score = 126 bits (317), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/136 (44%), Positives = 89/136 (65%), Gaps = 8/136 (5%)
Query: 674 QSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTD 733
QS RSC KVHKQGS +GR+IDL + Y++L++EL+ +F+ +G L+ P + W ++YTD
Sbjct: 674 QSSSTRSCKKVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDGELKSPCRNWLVVYTD 733
Query: 734 SENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGTTD-DTQSCLDQAPVIMEVSVSK 792
+E D+M+VGDDPW+EFC+ V KI IYT+EEVE+M G + + CL S+ +
Sbjct: 734 NEGDMMLVGDDPWNEFCDMVHKIFIYTREEVERMNPGALNARLEDCLSD-------SLGR 786
Query: 793 SSSVSQPDSSPTVVRV 808
+ +P S P+ V
Sbjct: 787 GLASKEPRSGPSTSAV 802
>gi|356525110|ref|XP_003531170.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 904
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 180/351 (51%), Positives = 242/351 (68%), Gaps = 13/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVA-SSSAFPPIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA S++ +PN+ L PQ+ C++ ++
Sbjct: 23 ELWHACAGPLVSLPAVGSRVVYFPQGHSEQVAVSTNREVDGHIPNYPSLPPQLICQLHNL 82
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L ++ + + E G +P+K + FCK LT
Sbjct: 83 TMHADTETDEVYAQMTLQP--------LNPQEQKGAYLPAELG--TPSKQPTNYFCKILT 132
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ QQ P QEL+A+DLHG EW+FRHI+RGQP+RHLL
Sbjct: 133 ASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPCQELIARDLHGNEWKFRHIFRGQPKRHLL 192
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+VLF+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 193 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQPVMPSSVLSSDSMHLGLLAA 252
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F +FY+PRA+ ++FVIP KYVK + + + +G RF+M FE ++S RR
Sbjct: 253 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRY 312
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI+DLD RWPNS WR + V WDE + Q +VS WEI+ + P
Sbjct: 313 MGTITGISDLDSIRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 63/94 (67%), Gaps = 2/94 (2%)
Query: 675 SPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTD 733
+P ++ KV+K GS GR++D+ + Y +L SEL +F +EG L DP + GW++++ D
Sbjct: 773 NPSNKTFVKVYKSGSF-GRSLDITKFTSYPELRSELARMFGLEGELEDPVRSGWQLVFVD 831
Query: 734 SENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
ENDV+++GD PW EF N V I I + +EV++M
Sbjct: 832 QENDVLLLGDGPWPEFVNSVGYIKILSPQEVQQM 865
>gi|224114483|ref|XP_002316773.1| predicted protein [Populus trichocarpa]
gi|222859838|gb|EEE97385.1| predicted protein [Populus trichocarpa]
Length = 914
Score = 356 bits (913), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 180/370 (48%), Positives = 248/370 (67%), Gaps = 13/370 (3%)
Query: 41 SSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PI 99
SS S N + + ELWHACAGPL SLP G+ VVYF QGH EQVA+S+
Sbjct: 4 SSASFNPQTQEGEKRVLNSELWHACAGPLVSLPAVGSRVVYFAQGHSEQVAASTNKEVDA 63
Query: 100 EVPNF-DLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEE 158
+PN+ L PQ+ C++ +V + A+ E DEVY Q+ L P L ++ +D + +
Sbjct: 64 RIPNYPSLPPQLICQLHNVTMHADVETDEVYAQLTLQP--------LSPQEQKDAYLPAD 115
Query: 159 GGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLH 218
G +P+K + FCKTLTASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+A+DLH
Sbjct: 116 LG--TPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLH 173
Query: 219 GVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRN 278
EW+FRHI+RGQP+RHLLTTGWS+FVS K L++GD+VLF+ + +L LGI+R+ +P+
Sbjct: 174 DNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLIAGDSVLFIWNEKNQLLLGIKRATRPQT 233
Query: 279 GLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVK-IIMNPIC 337
+P S+LS + + +L+ A+A +T S F +FY+PRA+ ++F+IP KY+K + +
Sbjct: 234 VMPSSVLSSDSMHLGLLAAAAHAAATNSRFTIFYNPRASPSEFIIPLAKYLKAVYYTRVS 293
Query: 338 IGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSP 397
+G RF+M FE ++S RR G +TGI+DLD RWPNS WR + V WDE + Q +VS
Sbjct: 294 VGMRFRMLFETEESSVRRYMGTITGISDLDVARWPNSLWRSVKVGWDESTAGERQPRVSL 353
Query: 398 WEIDRSVSLP 407
WEI+ + P
Sbjct: 354 WEIEPLTTFP 363
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 64/93 (68%), Gaps = 2/93 (2%)
Query: 676 PGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDS 734
P R+ KV+K GS GR++D+ + + YN+L SEL +F +EG L DP + GW++++ D
Sbjct: 775 PPSRTFVKVYKSGSF-GRSLDITKFSNYNELRSELAFMFGLEGQLEDPLRSGWQLVFIDR 833
Query: 735 ENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
ENDV+++GD PW EF N V I I + +EV++M
Sbjct: 834 ENDVLLLGDGPWPEFVNSVWCIKILSPQEVQQM 866
>gi|379323212|gb|AFD01305.1| auxin response factor 8-1 [Brassica rapa subsp. pekinensis]
Length = 780
Score = 355 bits (912), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 187/378 (49%), Positives = 251/378 (66%), Gaps = 19/378 (5%)
Query: 34 LNSSSSSSSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASS 93
+N SSS ++ L+S ELWHACAGPL SLP G+ VVYFPQGH EQVA++
Sbjct: 1 MNLSSSGFGHQSHEGEKKCLNS----ELWHACAGPLVSLPSSGSRVVYFPQGHSEQVAAT 56
Query: 94 SAFPPIE--VPNF-DLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQL 150
+ +E +PN+ L PQ+ C++ +V + A+ E DEVY Q+ L P L ++
Sbjct: 57 TN-KEVEGHIPNYPTLPPQLICQLHNVTMHADLETDEVYAQMVLQP--------LTQEEQ 107
Query: 151 EDLGVDEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQ 210
+D V E G P+K + FCKTLTASDTSTHGGFSVPRRAAE FPPLDY QQ P+Q
Sbjct: 108 KDTFVPIELG--VPSKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYTQQPPAQ 165
Query: 211 ELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGI 270
EL+AKDLH EW+FRHI+RGQP+RHLLTTGWS+FVS K LV+GD+V+F+R + +L LGI
Sbjct: 166 ELIAKDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVTGDSVIFIRNERNQLLLGI 225
Query: 271 RRSVQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVK 330
R + +P+ +P S+LS + + +L+ A+A +T S F VFY PR++ ++FV+P KY+K
Sbjct: 226 RHATRPQTIVPSSMLSSDSMHIGLLAAAAHAAATNSCFTVFYHPRSSSSEFVLPLPKYIK 285
Query: 331 IIMNP-ICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGS 389
+ + I +G RF+M FE ++S RR G +TGI DLD WPNS WR + V WDE
Sbjct: 286 AVFHTRISVGMRFRMLFETEESSVRRYMGTITGIGDLDSVLWPNSHWRSVKVGWDESTAG 345
Query: 390 DHQEQVSPWEIDRSVSLP 407
+ Q + S WEI+ + P
Sbjct: 346 ERQARASLWEIEPLTTFP 363
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 61/86 (70%), Gaps = 2/86 (2%)
Query: 683 KVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMVV 741
KV+K GS VGR++D+ R + YN+L EL +F+++GLL D + GW++++ D E+D++++
Sbjct: 680 KVYKSGS-VGRSLDISRFSSYNELREELGRMFDIKGLLEDAFRSGWQLVFVDKEDDILLL 738
Query: 742 GDDPWHEFCNEVSKIHIYTQEEVEKM 767
GDDPW F N V I I + ++V KM
Sbjct: 739 GDDPWESFVNSVWYIKILSPDDVHKM 764
>gi|168028300|ref|XP_001766666.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682098|gb|EDQ68519.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 369
Score = 355 bits (911), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 181/348 (52%), Positives = 235/348 (67%), Gaps = 19/348 (5%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVA-SSSAFPPIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA S+ +PN+ +L+P + C + ++
Sbjct: 4 ELWHACAGPLVSLPPVGSQVVYFPQGHSEQVAVSTQKEADTHIPNYPNLRPHLVCTLDNI 63
Query: 118 QLLANKENDEVYTQVALLP--QPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKT 175
L A+ E DEVY Q+ L+P P+ E + L +++ + PT+ FCKT
Sbjct: 64 TLHADLETDEVYAQMVLIPSQDPDKETMLLPDAVVQN---------KQPTE----YFCKT 110
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR-GQPRR 234
LTASDTSTHGGFS+PRRAAE FP LDY QQ P+QELVA+DLH +W FRHIYR GQPRR
Sbjct: 111 LTASDTSTHGGFSIPRRAAEKVFPTLDYNQQPPAQELVARDLHDQDWHFRHIYRAGQPRR 170
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS+FVS K L +GDAVLF+R G+L LGIRR+ + + +P S+LS + + +
Sbjct: 171 HLLTTGWSVFVSAKRLQAGDAVLFIRDDKGQLLLGIRRANRLQTMMPSSVLSSDSMHIGI 230
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPE 353
L+ ++A T S F +FY+PR + ++FVIP KY K + + + +G RF+M FE ++S
Sbjct: 231 LAAASHAAQTSSRFTIFYNPRQSPSEFVIPLAKYQKAVYSTQVTVGMRFRMVFETEESTV 290
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
RR G VTGI DLDP RWPNS WR L V WDE + Q +VS WEI+
Sbjct: 291 RRYMGTVTGIGDLDPVRWPNSHWRSLKVGWDESTAGERQRRVSLWEIE 338
>gi|357520595|ref|XP_003630586.1| Auxin response factor-like protein [Medicago truncatula]
gi|355524608|gb|AET05062.1| Auxin response factor-like protein [Medicago truncatula]
Length = 733
Score = 355 bits (911), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 173/361 (47%), Positives = 241/361 (66%), Gaps = 13/361 (3%)
Query: 101 VPNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGG 160
+P +DL+P+I C+V++V L A + DEV+ QV L+P+P ++ V++E
Sbjct: 1 MPVYDLRPKILCRVINVMLKAEPDTDEVFAQVTLVPEP----------NQDENAVEKEAP 50
Query: 161 GRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGV 220
P + H FCKTLTASDTSTHGGFSV RR A++C PPLD +Q P+QELVAKDLHG
Sbjct: 51 PAPPPRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSKQPPTQELVAKDLHGN 110
Query: 221 EWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGL 280
EWRFRHI+RGQPRRHLL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++ + +
Sbjct: 111 EWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNV 170
Query: 281 PDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGT 340
P S++S + + VL+ +AV T +MF V+Y PR + A+F++PY +Y++ + N IG
Sbjct: 171 PSSVISSHSMHLGVLATAWHAVLTGTMFTVYYKPRTSPAEFIVPYDQYMESLKNNYTIGM 230
Query: 341 RFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEI 400
RFKMRFE +++PE+R G + GI D D RWP SKWRCL VRWDE E+VSPW+I
Sbjct: 231 RFKMRFEGEEAPEQRFTGTIVGIEDSDSKRWPTSKWRCLKVRWDETSNIPRPERVSPWKI 290
Query: 401 DRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGG---VLDFEESVRSSKVLQGQE 457
+ +++ P L+ PR K+ R + PD V R +D + +VLQGQE
Sbjct: 291 EPALAPPALNPLPMPRPKRPRANVVPSSPDSSVLTREASSKVSMDPLPTSGFQRVLQGQE 350
Query: 458 N 458
+
Sbjct: 351 S 351
Score = 120 bits (300), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 51/98 (52%), Positives = 73/98 (74%)
Query: 674 QSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTD 733
QS RSCTKVHK+G +GR++DL + + Y++L +EL+ LF G L P K W +++TD
Sbjct: 605 QSGSARSCTKVHKKGIALGRSVDLTKFSDYDELTAELDQLFEFRGELISPQKDWLVVFTD 664
Query: 734 SENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGT 771
+E D+M+VGDDPW EFC+ V KI+IY +EE++KM+ GT
Sbjct: 665 NEGDMMLVGDDPWQEFCSMVRKIYIYPKEEIQKMSPGT 702
>gi|414877792|tpg|DAA54923.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 707
Score = 355 bits (910), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 184/392 (46%), Positives = 249/392 (63%), Gaps = 22/392 (5%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIE-VPNFDLQPQIFCK 113
+++ ELW ACAGPL+ +P G V Y PQGH+EQV AS++ + P ++L +I CK
Sbjct: 20 ALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWKIPCK 79
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTP---- 169
+++++L + DEVY Q+ LLP + KQ E+ E + P
Sbjct: 80 LMNIELKVEPDTDEVYAQLTLLP---------DKKQDENTSTTVEEEEVVVPPALPATNE 130
Query: 170 ----HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFR 225
H FCKTLTASDTSTHGGFSV RR A++C PPLD Q P+QELVAKDLHG EWRFR
Sbjct: 131 GPHIHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFR 190
Query: 226 HIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSIL 285
HI+RGQPRRHLL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++ + +P S++
Sbjct: 191 HIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVI 250
Query: 286 SKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMR 345
S N + VL+ +AV+T SMF V+Y PR + A+FV+ +Y + + IG RFKMR
Sbjct: 251 SSHNMHLGVLATAWHAVNTDSMFTVYYKPRTSPAEFVVSRDRYYESLKRNYSIGMRFKMR 310
Query: 346 FEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS 405
FE +++ E+R G + GI DP W +SKWR L VRWDE E+VSPW+I+ SVS
Sbjct: 311 FEGEEAAEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEPSVS 370
Query: 406 LPPLSIQSSP-RMKKLRTGLQAPPPDYPVSAR 436
P + P R K+ R+ + A P D R
Sbjct: 371 --PCHVNPLPVRFKRSRSSVNALPSDVSTVTR 400
>gi|301793209|emb|CBA11995.1| putative auxin response factor 8 [Amborella trichopoda]
Length = 838
Score = 355 bits (910), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 181/363 (49%), Positives = 244/363 (67%), Gaps = 13/363 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVY PQGH EQVA+S+ +PN+ L PQ+ C++ DV
Sbjct: 23 ELWHACAGPLVSLPAVGSRVVYLPQGHSEQVAASTNKEIDAHIPNYPSLPPQLICQLHDV 82
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L ++ +D V G P+K + FCKTLT
Sbjct: 83 TMHADVETDEVYAQMTLQP--------LTQQEQKDAYVPTVLG--FPSKQPTNYFCKTLT 132
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+A+DLH VEW+FRHI+RGQP+RHLL
Sbjct: 133 ASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPAQELIARDLHDVEWKFRHIFRGQPKRHLL 192
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+V+F+ +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 193 TTGWSVFVSAKRLVAGDSVIFIWNDKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAA 252
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F +FY+PRA+ ++FVIP+ K+ K + + I +G RF+M FE ++S RR
Sbjct: 253 AAHAAATNSRFTIFYNPRASPSEFVIPFAKFAKAVYHTRISVGMRFRMLFETEESGVRRY 312
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPR 416
G +TG DLDP RW NS WR + V WDE + Q +VS W+I+ + P + R
Sbjct: 313 MGTITGKCDLDPVRWSNSHWRSVKVGWDESTAGERQPRVSLWDIEPLTTFPMYPSPFALR 372
Query: 417 MKK 419
+K+
Sbjct: 373 LKR 375
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 55/92 (59%), Gaps = 2/92 (2%)
Query: 683 KVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMVV 741
K++K G VGR +D+ + + Y +L ++ +F +EG L DP + GW++++ D END +++
Sbjct: 712 KIYKTGC-VGRTLDISQFSSYEELRGKVADMFGLEGQLDDPLRSGWQLVFVDRENDALLL 770
Query: 742 GDDPWHEFCNEVSKIHIYTQEEVEKMTIGTTD 773
GD PW F N V I I + +++ M D
Sbjct: 771 GDGPWEAFVNNVWYIKILSPHDIQMMGTNGVD 802
>gi|224028299|gb|ACN33225.1| unknown [Zea mays]
Length = 832
Score = 355 bits (910), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 184/392 (46%), Positives = 249/392 (63%), Gaps = 22/392 (5%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIE-VPNFDLQPQIFCK 113
+++ ELW ACAGPL+ +P G V Y PQGH+EQV AS++ + P ++L +I CK
Sbjct: 22 ALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWKIPCK 81
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTP---- 169
+++++L + DEVY Q+ LLP + KQ E+ E + P
Sbjct: 82 LMNIELKVEPDTDEVYAQLTLLP---------DKKQDENTSTTVEEEEVVVPPALPATNE 132
Query: 170 ----HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFR 225
H FCKTLTASDTSTHGGFSV RR A++C PPLD Q P+QELVAKDLHG EWRFR
Sbjct: 133 GPHIHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFR 192
Query: 226 HIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSIL 285
HI+RGQPRRHLL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++ + +P S++
Sbjct: 193 HIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVI 252
Query: 286 SKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMR 345
S N + VL+ +AV+T SMF V+Y PR + A+FV+ +Y + + IG RFKMR
Sbjct: 253 SSHNMHLGVLATAWHAVNTDSMFTVYYKPRTSPAEFVVSRDRYYESLKRNYSIGMRFKMR 312
Query: 346 FEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS 405
FE +++ E+R G + GI DP W +SKWR L VRWDE E+VSPW+I+ SVS
Sbjct: 313 FEGEEAAEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEPSVS 372
Query: 406 LPPLSIQSSP-RMKKLRTGLQAPPPDYPVSAR 436
P + P R K+ R+ + A P D R
Sbjct: 373 --PCHVNPLPVRFKRSRSSVNALPSDVSTVTR 402
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 75/97 (77%)
Query: 674 QSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTD 733
QS RSC KVHKQGS +GR+IDL + Y++L++EL+ +F+ +G L+ P K W ++YTD
Sbjct: 699 QSSSTRSCKKVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDGELKSPCKSWLVVYTD 758
Query: 734 SENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIG 770
+E D+M+VGDDPW+EFC+ V KI IYT+EEVE+M G
Sbjct: 759 NEGDIMLVGDDPWNEFCDMVHKIFIYTREEVERMNPG 795
>gi|224029659|gb|ACN33905.1| unknown [Zea mays]
Length = 830
Score = 355 bits (910), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 184/392 (46%), Positives = 249/392 (63%), Gaps = 22/392 (5%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIE-VPNFDLQPQIFCK 113
+++ ELW ACAGPL+ +P G V Y PQGH+EQV AS++ + P ++L +I CK
Sbjct: 20 ALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWKIPCK 79
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTP---- 169
+++++L + DEVY Q+ LLP + KQ E+ E + P
Sbjct: 80 LMNIELKVEPDTDEVYAQLTLLP---------DKKQDENTSTTVEEEEVVVPPALPATNE 130
Query: 170 ----HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFR 225
H FCKTLTASDTSTHGGFSV RR A++C PPLD Q P+QELVAKDLHG EWRFR
Sbjct: 131 GPHIHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFR 190
Query: 226 HIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSIL 285
HI+RGQPRRHLL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++ + +P S++
Sbjct: 191 HIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVI 250
Query: 286 SKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMR 345
S N + VL+ +AV+T SMF V+Y PR + A+FV+ +Y + + IG RFKMR
Sbjct: 251 SSHNMHLGVLATAWHAVNTDSMFTVYYKPRTSPAEFVVSRDRYYESLKRNYSIGMRFKMR 310
Query: 346 FEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS 405
FE +++ E+R G + GI DP W +SKWR L VRWDE E+VSPW+I+ SVS
Sbjct: 311 FEGEEAAEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEPSVS 370
Query: 406 LPPLSIQSSP-RMKKLRTGLQAPPPDYPVSAR 436
P + P R K+ R+ + A P D R
Sbjct: 371 --PCHVNPLPVRFKRSRSSVNALPSDVSTVTR 400
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 75/97 (77%)
Query: 674 QSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTD 733
QS RSC KVHKQGS +GR+IDL + Y++L++EL+ +F+ +G L+ P K W ++YTD
Sbjct: 697 QSSSTRSCKKVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDGELKSPCKSWLVVYTD 756
Query: 734 SENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIG 770
+E D+M+VGDDPW+EFC+ V KI IYT+EEVE+M G
Sbjct: 757 NEGDIMLVGDDPWNEFCDMVHKIFIYTREEVERMNPG 793
>gi|168004026|ref|XP_001754713.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694334|gb|EDQ80683.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 398
Score = 354 bits (909), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 187/407 (45%), Positives = 257/407 (63%), Gaps = 33/407 (8%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNF-DLQPQIFCKVVDVQ 118
ELWHACAGPLT LP + V+Y+PQGH+EQV ++ + + F +L + CK+ ++
Sbjct: 7 ELWHACAGPLTQLPPVDSHVMYWPQGHIEQVCAADVYQASK--QFSNLPAHLLCKISKIE 64
Query: 119 LLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPT-KSTPHMFCKTLT 177
L A+ DEV+ Q+ L PQ E E K+++D PT + FCKTLT
Sbjct: 65 LQADPHTDEVFAQMDLTPQYETEF----TKEMKD--------APPPTMQKNVRSFCKTLT 112
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAEDC P LD+ P QELVAKDLHG EW FRHIYRG PRRHLL
Sbjct: 113 ASDTSTHGGFSVPRRAAEDCLPLLDHSMNPPCQELVAKDLHGKEWNFRHIYRGHPRRHLL 172
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVSQK LV+GD V+FLRG++G+LR+G+RR+ + + S N + VL+
Sbjct: 173 TTGWSVFVSQKRLVAGDTVIFLRGENGQLRVGVRRASKQLPQTRSTHFSNANLHLGVLAA 232
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCN 357
++A + + F V Y+PR + ++FVIPY KY+K N + +G+RFKM+FE D+S ERR +
Sbjct: 233 ASHAATERLRFSVIYNPRTSPSEFVIPYHKYLKTKENNLTVGSRFKMKFESDESTERRYS 292
Query: 358 GVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSV---SLPPLSIQSS 414
G + ++D DP +WPNS WR + V WDE S+ E+VSPWEI+ V +LP S+
Sbjct: 293 GTIVEVSDADPLKWPNSAWRSMKVEWDES-ASERHERVSPWEIEPFVPISTLPTPSVGPR 351
Query: 415 PRMKKLRTGLQAPPPDYPVSARGGG----VLDFEESVRSSKVLQGQE 457
P+ + PP + + G VLD ++S + +++L +
Sbjct: 352 PKRR---------PPTFVTDSSPQGTSQSVLDPQQSNKLARILHSHD 389
>gi|414878009|tpg|DAA55140.1| TPA: hypothetical protein ZEAMMB73_057592 [Zea mays]
Length = 781
Score = 354 bits (909), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 181/363 (49%), Positives = 246/363 (67%), Gaps = 13/363 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA+S+ ++PN+ +L PQ+ C++ +V
Sbjct: 25 ELWHACAGPLVSLPVVGSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLICQLHNV 84
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E EVY Q+ L P L+ E ++ L ++ G PT + FCKTLT
Sbjct: 85 TMHADAETGEVYAQMTLQP------LSPEEQKEPFLPIELGAGSNQPT----NYFCKTLT 134
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ Q P QELVA+DLH EW+FRHI+RGQP+RHLL
Sbjct: 135 ASDTSTHGGFSVPRRAAEKVFPPLDFSQHPPVQELVARDLHDNEWKFRHIFRGQPKRHLL 194
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+++F+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 195 TTGWSVFVSAKRLVAGDSIIFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAA 254
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F +FY+PRA+ ++FVIP KYVK + + + +G RF+M FE ++S RR
Sbjct: 255 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRY 314
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPR 416
G +T I+DLD RWPNS WR + V WDE D Q +VS WEI+ ++ P R
Sbjct: 315 MGTITCISDLDSERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPLMAFPMYPTAFPLR 374
Query: 417 MKK 419
+K+
Sbjct: 375 LKR 377
>gi|302030878|gb|ADK91822.1| auxin response factor 6 [Solanum lycopersicum]
Length = 868
Score = 354 bits (908), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 183/367 (49%), Positives = 247/367 (67%), Gaps = 12/367 (3%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPI-EVPNF-DLQPQIFCK 113
S+ ELWHACAGPL SLP G VVYFPQGH EQVA+S+ +P++ L PQ+ C+
Sbjct: 8 SLNSELWHACAGPLVSLPHVGTRVVYFPQGHSEQVAASTNKEINGHIPSYPGLPPQLICQ 67
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFC 173
+ +V + A+ E DEVY Q+ L P L ++ +D+ + G + +K + FC
Sbjct: 68 LHNVTMDADVETDEVYAQMTLQP--------LTPQEQKDVCLLPAELG-TLSKQPSNYFC 118
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
KTLTASDTSTHGGFSVPRRAAE FPPLDY QQ P QEL+ KDLHG EW+FRHI+RGQP+
Sbjct: 119 KTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPVQELIGKDLHGNEWKFRHIFRGQPK 178
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
RHLLTTGWS+FVS K LV+GD+V+F+ ++ +L LGIRR+ +P+ LP S+LS + +
Sbjct: 179 RHLLTTGWSVFVSAKRLVAGDSVIFIWNENNQLLLGIRRANRPQTVLPSSVLSSDSMHIG 238
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSP 352
+L+ A+A +T S F +F++PRA ++FVIP KY K + + + +G RF+M FE ++S
Sbjct: 239 LLAAAAHAAATNSRFTIFFNPRACPSEFVIPLAKYAKAVYHTRVSVGMRFRMLFETEESS 298
Query: 353 ERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQ 412
RR G +TGI DLDP RWPNS W+ + V WDE + Q +VS WEI+ + P
Sbjct: 299 IRRYMGTITGIGDLDPVRWPNSHWQSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSP 358
Query: 413 SSPRMKK 419
S R+K+
Sbjct: 359 FSLRLKR 365
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 62/86 (72%), Gaps = 2/86 (2%)
Query: 683 KVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMVV 741
KV+K S GR++D+ + + YN+L SEL +F +EGLL DP + GW++++ D ENDV+++
Sbjct: 738 KVYKSESF-GRSLDISKFSSYNELRSELARMFGLEGLLEDPERSGWQLVFVDRENDVLLL 796
Query: 742 GDDPWHEFCNEVSKIHIYTQEEVEKM 767
GDDPWHEF N V I I + EV++M
Sbjct: 797 GDDPWHEFVNSVWYIKILSPLEVQQM 822
>gi|168023081|ref|XP_001764067.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684806|gb|EDQ71206.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 875
Score = 353 bits (907), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 185/350 (52%), Positives = 234/350 (66%), Gaps = 14/350 (4%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV--ASSSAFPPIEVPNF-DLQPQIFC 112
S+ ELWHACAGPL SLP G+ VVYFPQGH EQV AS+ +PN+ +L ++ C
Sbjct: 7 SLNSELWHACAGPLVSLPPVGSRVVYFPQGHTEQVVAASTQKEADAHIPNYPNLPSRLVC 66
Query: 113 KVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMF 172
+ +V L A+ E DEVY Q+ L+P L EA D+G+ R PT+ F
Sbjct: 67 LLDNVTLHADLETDEVYAQMTLIP--VLPANEKEALISPDIGMR----SRQPTE----YF 116
Query: 173 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQP 232
CKTLTASDTSTHGGFS+PRRAAE FPPLDY Q P+QEL A+DLH EW FRHIYRGQP
Sbjct: 117 CKTLTASDTSTHGGFSIPRRAAEKVFPPLDYTQTPPAQELKARDLHDQEWHFRHIYRGQP 176
Query: 233 RRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYP 292
RRHLLTTGWS+FVS K L +GDAVLF+R G+L+LGIRR + + +P S+LS + +
Sbjct: 177 RRHLLTTGWSVFVSAKRLQAGDAVLFIRDDKGQLQLGIRRQNRQQTVMPSSVLSSDSMHI 236
Query: 293 NVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMN-PICIGTRFKMRFEMDDS 351
VL+ +A +T S F +FY+PR + ++FVIP KY K I + + +G RF+M FE ++S
Sbjct: 237 GVLAAANHAAATSSRFTIFYNPRQSPSEFVIPVAKYQKAICSLQVSVGMRFRMVFETEES 296
Query: 352 PERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
RR G +TG+ DLDP RWPNS WR L V WDE + Q +VS WEI+
Sbjct: 297 SVRRYMGTITGMGDLDPIRWPNSHWRSLKVGWDESTAGERQRRVSLWEIE 346
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 65/90 (72%), Gaps = 2/90 (2%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSEND 737
R+ TKVHK GS VGR+ID+ + Y++L +EL LFN++ LL DP + GW++++ D+END
Sbjct: 740 RTFTKVHKLGS-VGRSIDVQKFQNYSELRAELARLFNLDNLLDDPQRTGWQLVFVDNEND 798
Query: 738 VMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
++VGDDPW EF N V I I + E+++M
Sbjct: 799 TLLVGDDPWEEFVNYVRSIKILSPNEIQQM 828
>gi|350539495|ref|NP_001234663.1| auxin response factor 6 [Solanum lycopersicum]
gi|294652034|gb|ACU30063.2| auxin response factor 6 [Solanum lycopersicum]
Length = 881
Score = 353 bits (907), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 183/367 (49%), Positives = 247/367 (67%), Gaps = 12/367 (3%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPI-EVPNF-DLQPQIFCK 113
S+ ELWHACAGPL SLP G VVYFPQGH EQVA+S+ +P++ L PQ+ C+
Sbjct: 21 SLNSELWHACAGPLVSLPHVGTRVVYFPQGHSEQVAASTNKEINGHIPSYPGLPPQLICQ 80
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFC 173
+ +V + A+ E DEVY Q+ L P L ++ +D+ + G + +K + FC
Sbjct: 81 LHNVTMDADVETDEVYAQMTLQP--------LTPQEQKDVCLLPAELG-TLSKQPSNYFC 131
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
KTLTASDTSTHGGFSVPRRAAE FPPLDY QQ P QEL+ KDLHG EW+FRHI+RGQP+
Sbjct: 132 KTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPVQELIGKDLHGNEWKFRHIFRGQPK 191
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
RHLLTTGWS+FVS K LV+GD+V+F+ ++ +L LGIRR+ +P+ LP S+LS + +
Sbjct: 192 RHLLTTGWSVFVSAKRLVAGDSVIFIWNENNQLLLGIRRANRPQTVLPSSVLSSDSMHIG 251
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSP 352
+L+ A+A +T S F +F++PRA ++FVIP KY K + + + +G RF+M FE ++S
Sbjct: 252 LLAAAAHAAATNSRFTIFFNPRACPSEFVIPLAKYAKAVYHTRVSVGMRFQMLFETEESS 311
Query: 353 ERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQ 412
RR G +TGI DLDP RWPNS W+ + V WDE + Q +VS WEI+ + P
Sbjct: 312 IRRYMGTITGIGDLDPVRWPNSHWQSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSP 371
Query: 413 SSPRMKK 419
S R+K+
Sbjct: 372 FSLRLKR 378
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 62/86 (72%), Gaps = 2/86 (2%)
Query: 683 KVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMVV 741
KV+K S GR++D+ + + YN+L SEL +F +EGLL DP + GW++++ D ENDV+++
Sbjct: 751 KVYKSESF-GRSLDISKFSSYNELRSELARMFGLEGLLEDPERSGWQLVFVDRENDVLLL 809
Query: 742 GDDPWHEFCNEVSKIHIYTQEEVEKM 767
GDDPWHEF N V I I + EV++M
Sbjct: 810 GDDPWHEFVNSVWYIKILSPLEVQQM 835
>gi|226501654|ref|NP_001146279.1| uncharacterized protein LOC100279854 [Zea mays]
gi|219886495|gb|ACL53622.1| unknown [Zea mays]
gi|407232696|gb|AFT82690.1| ARF9 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|414878010|tpg|DAA55141.1| TPA: hypothetical protein ZEAMMB73_057592 [Zea mays]
Length = 888
Score = 353 bits (907), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 181/363 (49%), Positives = 246/363 (67%), Gaps = 13/363 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA+S+ ++PN+ +L PQ+ C++ +V
Sbjct: 25 ELWHACAGPLVSLPVVGSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLICQLHNV 84
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E EVY Q+ L P L+ E ++ L ++ G PT + FCKTLT
Sbjct: 85 TMHADAETGEVYAQMTLQP------LSPEEQKEPFLPIELGAGSNQPT----NYFCKTLT 134
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ Q P QELVA+DLH EW+FRHI+RGQP+RHLL
Sbjct: 135 ASDTSTHGGFSVPRRAAEKVFPPLDFSQHPPVQELVARDLHDNEWKFRHIFRGQPKRHLL 194
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+++F+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 195 TTGWSVFVSAKRLVAGDSIIFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAA 254
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F +FY+PRA+ ++FVIP KYVK + + + +G RF+M FE ++S RR
Sbjct: 255 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRY 314
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPR 416
G +T I+DLD RWPNS WR + V WDE D Q +VS WEI+ ++ P R
Sbjct: 315 MGTITCISDLDSERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPLMAFPMYPTAFPLR 374
Query: 417 MKK 419
+K+
Sbjct: 375 LKR 377
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 64/93 (68%), Gaps = 2/93 (2%)
Query: 682 TKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMV 740
KV+K GS GR++D+ R + Y +L SELE LF +EG L DP + GW++++ D END+++
Sbjct: 758 VKVYKSGS-PGRSLDITRFSSYYELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDILL 816
Query: 741 VGDDPWHEFCNEVSKIHIYTQEEVEKMTIGTTD 773
VGDDPW EF N V I I + ++V++M G D
Sbjct: 817 VGDDPWQEFVNSVWCIKILSPQDVQQMVRGGGD 849
>gi|300373056|gb|ADG43143.1| auxin response factor 9 [Zea mays]
Length = 881
Score = 353 bits (907), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 181/363 (49%), Positives = 246/363 (67%), Gaps = 13/363 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA+S+ ++PN+ +L PQ+ C++ +V
Sbjct: 18 ELWHACAGPLVSLPVVGSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLICQLHNV 77
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E EVY Q+ L P L+ E ++ L ++ G PT + FCKTLT
Sbjct: 78 TMHADAETGEVYAQMTLQP------LSPEEQKEPFLPIELGAGSNQPT----NYFCKTLT 127
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ Q P QELVA+DLH EW+FRHI+RGQP+RHLL
Sbjct: 128 ASDTSTHGGFSVPRRAAEKVFPPLDFSQHPPVQELVARDLHDNEWKFRHIFRGQPKRHLL 187
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+++F+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 188 TTGWSVFVSAKRLVAGDSIIFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAA 247
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F +FY+PRA+ ++FVIP KYVK + + + +G RF+M FE ++S RR
Sbjct: 248 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRY 307
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPR 416
G +T I+DLD RWPNS WR + V WDE D Q +VS WEI+ ++ P R
Sbjct: 308 MGTITCISDLDSERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPLMAFPMYPTAFPLR 367
Query: 417 MKK 419
+K+
Sbjct: 368 LKR 370
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 64/93 (68%), Gaps = 2/93 (2%)
Query: 682 TKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMV 740
KV+K GS GR++D+ R + Y +L SELE LF +EG L DP + GW++++ D END+++
Sbjct: 751 VKVYKSGS-PGRSLDITRFSSYYELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDILL 809
Query: 741 VGDDPWHEFCNEVSKIHIYTQEEVEKMTIGTTD 773
VGDDPW EF N V I I + ++V++M G D
Sbjct: 810 VGDDPWQEFVNSVWCIKILSPQDVQQMVRGGGD 842
>gi|359492209|ref|XP_003634381.1| PREDICTED: auxin response factor 5-like isoform 1 [Vitis vinifera]
Length = 925
Score = 353 bits (907), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 186/371 (50%), Positives = 244/371 (65%), Gaps = 18/371 (4%)
Query: 41 SSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPI- 99
SS N + +S +I ELWHACAGPL SLP+ G++V YFPQGH EQVA S+
Sbjct: 3 SSVEENIKAGGLVSEAINSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTKRTATS 62
Query: 100 EVPNF-DLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAK--QLEDLGVD 156
++PN+ +L Q+ C+V +V L A+K+ DE+Y Q++L P +N E + D G+
Sbjct: 63 QIPNYPNLPSQLMCQVHNVTLHADKDTDEIYAQMSLQP------VNSEKDIFPIPDFGL- 115
Query: 157 EEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKD 216
P+K FCKTLTASDTSTHGGFSVPRRAAE FPPLDY Q P+QEL+ +D
Sbjct: 116 ------KPSKHPSEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYSMQPPTQELIVRD 169
Query: 217 LHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQP 276
LH + + FRHIYRGQP+RHLLTTGWS+FVS K L +GDAVLF+R + +L LG+RR+ +
Sbjct: 170 LHDITYTFRHIYRGQPKRHLLTTGWSVFVSAKRLRAGDAVLFIRDEKSQLLLGVRRANRQ 229
Query: 277 RNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIM-NP 335
+ LP S+LS + + VL+ A+A + +S F +FY+PRA ++FVIP KY K +
Sbjct: 230 QTSLPSSVLSADSMHIGVLAAAAHAAANRSPFTIFYNPRACPSEFVIPLAKYRKSVYGTQ 289
Query: 336 ICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQV 395
I +G RF M FE ++S +RR G + GI+DLDP WP SKWR L V WDE D Q +V
Sbjct: 290 ISVGMRFGMMFETEESGKRRYMGTIVGISDLDPLSWPGSKWRNLQVEWDESGCGDKQSRV 349
Query: 396 SPWEIDRSVSL 406
S WEI+ SL
Sbjct: 350 SSWEIETPESL 360
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
Query: 676 PGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRD-PAKGWRILYTDS 734
P R+ TKV K GS VGR+ID+ Y +L S +E +F +EGLL D GW+++Y D
Sbjct: 812 PPMRTYTKVQKMGS-VGRSIDVASFKNYEELCSAIECMFGLEGLLNDQKGSGWKLVYVDY 870
Query: 735 ENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
ENDV++VGDDPW EF V I I + EV++M+
Sbjct: 871 ENDVLLVGDDPWKEFVGCVRCIRILSPSEVQQMS 904
>gi|168042037|ref|XP_001773496.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675198|gb|EDQ61696.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1103
Score = 353 bits (905), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 185/360 (51%), Positives = 232/360 (64%), Gaps = 28/360 (7%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPP-IEVPNF-DLQPQIFC----- 112
ELWHACAGPL SLP G+ VVYFPQGH EQVA+S+ +PN+ L ++ C
Sbjct: 77 ELWHACAGPLVSLPPIGSRVVYFPQGHTEQVAASTQREAETHIPNYPSLPSRLVCLLDNV 136
Query: 113 ----------KVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGR 162
++DV + A+ E DEVY Q+ L+P P EA D+G+ R
Sbjct: 137 TLHVSDRYSMSLIDVVIQADLETDEVYAQMTLIPVPPAN--EKEALMSPDIGIR----SR 190
Query: 163 SPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEW 222
PT FCKTLTASDTSTHGGFS+PRRAAE FPPLDY Q P+QEL A+DLH EW
Sbjct: 191 QPTD----YFCKTLTASDTSTHGGFSIPRRAAEKVFPPLDYSQTPPAQELKARDLHDQEW 246
Query: 223 RFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPD 282
FRHIYRGQPRRHLLTTGWS+FVS K L +GDAVLF+R G+L+LGIRR + + +P
Sbjct: 247 HFRHIYRGQPRRHLLTTGWSVFVSAKRLQAGDAVLFIRDDKGQLQLGIRRQNRQQTVMPS 306
Query: 283 SILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMN-PICIGTR 341
S+LS + + VL+ +A +T S F +FY+PR + ++FVIP KY K I N + +G R
Sbjct: 307 SVLSSDSMHIGVLAAANHAAATSSRFTIFYNPRQSPSEFVIPVAKYQKAICNLQVSVGMR 366
Query: 342 FKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
F+M FE ++S RR G +TG+ DLDP RWPNS WR L V WDE + Q +VS WEI+
Sbjct: 367 FRMVFETEESSVRRYMGTITGMGDLDPIRWPNSHWRSLKVGWDESTAGERQRRVSLWEIE 426
Score = 102 bits (254), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 48/98 (48%), Positives = 69/98 (70%), Gaps = 2/98 (2%)
Query: 672 SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRIL 730
S+ +P R+ TKVHK GS VGR+ID+ + Y++L EL LFN+EGLL DP + GW+++
Sbjct: 804 SAMAPTSRTFTKVHKLGS-VGRSIDVQKFQNYSELRVELARLFNLEGLLDDPQRSGWQLV 862
Query: 731 YTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
+ D+END ++VGDDPW EF N V I I + E+ +M+
Sbjct: 863 FVDNENDTLLVGDDPWEEFVNCVRSIKILSPNEILQMS 900
>gi|379323232|gb|AFD01315.1| auxin response factor 18-1 [Brassica rapa subsp. pekinensis]
Length = 1055
Score = 353 bits (905), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 180/381 (47%), Positives = 246/381 (64%), Gaps = 21/381 (5%)
Query: 45 ANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSS--AFPPIEVP 102
+ SS SS +Y ELW ACAGPL +P G V YFPQGH+EQ+ +S+ ++P
Sbjct: 9 SRSSFPSSYQDQLYTELWKACAGPLVEVPLVGERVFYFPQGHMEQLVASTNQGIESEKIP 68
Query: 103 NFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPEL-EGLNLEAKQLEDLGVDEEGGG 161
+F L P+I C+V+ V L A + DEVY Q+ L P+ + E +L+ +E
Sbjct: 69 DFKLPPKILCQVLSVMLKAEHDTDEVYAQITLKPEEDQSEPTSLDPPIVE---------- 118
Query: 162 RSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVE 221
PTK H F K LTASDTSTHGGFSV R+ A +C P LD Q P+QELV +DLHG E
Sbjct: 119 --PTKQMFHSFVKILTASDTSTHGGFSVLRKHATECLPALDMTQAIPTQELVTRDLHGFE 176
Query: 222 WRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLP 281
WRF+HI+RGQPRRHLLTTGWS FVS K LV+GDA +FLRG++G+LR+G+RR + +N +P
Sbjct: 177 WRFKHIFRGQPRRHLLTTGWSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQNTMP 236
Query: 282 DSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTR 341
S++S Q+ + VL+ ++AV+T++MF VFY PR + F++ KY++ + + +GTR
Sbjct: 237 ASVISSQSMHLGVLATASHAVNTQTMFLVFYKPRISQ--FIVSVNKYMEAMKHGFSLGTR 294
Query: 342 FKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
F+MRFE ++SPER G + GI DL +WP S WR L V+WDE ++VSPWEI+
Sbjct: 295 FRMRFEGEESPERIFTGTIVGIGDLSS-QWPASTWRSLQVQWDEPTTVQRPDKVSPWEIE 353
Query: 402 RSVSLPPLSI---QSSPRMKK 419
+ P S QS P+ K+
Sbjct: 354 PFLPSSPASTPSQQSQPKSKR 374
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/164 (35%), Positives = 82/164 (50%), Gaps = 29/164 (17%)
Query: 628 KPVENIPTPTFKANMRSHKDGSFNGTAAGC-KLFGFSLTSETPTP--------------- 671
KP+E+ +A+ + A+ C +LFGF LTS P P
Sbjct: 376 KPIESSSLSPGQASFLGVQAEPPPPPASSCYRLFGFDLTSNPPAPIPPDKQPMDTSEAAK 435
Query: 672 --------SSQSPGK----RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGL 719
S P K R+ TKV QG VGRA+DL L Y++L+ ELE +F ++G
Sbjct: 436 CQDPITPSSVNEPKKQQTSRTRTKVQMQGIAVGRAVDLTLLKSYDELIKELEEMFEIQGQ 495
Query: 720 LRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEE 763
L P W +++TD E D+M+ GDDPW+EFC KI IY+ +E
Sbjct: 496 LL-PRDKWIVVFTDDEGDMMLAGDDPWNEFCKMAKKIFIYSSDE 538
>gi|356522502|ref|XP_003529885.1| PREDICTED: auxin response factor 7-like [Glycine max]
Length = 722
Score = 353 bits (905), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 178/367 (48%), Positives = 245/367 (66%), Gaps = 16/367 (4%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKVV 115
+Y ELW CAGPL +P+ G+ V YFPQGH+EQ+ AS+ E+P+F+L +IFC+VV
Sbjct: 28 LYRELWKLCAGPLVDVPRNGDRVFYFPQGHMEQLQASTDQELNQEIPHFNLPAKIFCRVV 87
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKT 175
++QLLA ++ DEVY +ALLP E+ Q E D +P K H FCK
Sbjct: 88 NIQLLAEQDTDEVYACIALLP---------ESDQTEPTNPDP-NVSEAP-KQKFHSFCKI 136
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
LTASDTSTHGGFSV R+ A +C P LD Q P+QEL AKDLHG EW+F+HIYRGQPRRH
Sbjct: 137 LTASDTSTHGGFSVLRKHATECLPELDMTQSTPTQELAAKDLHGFEWKFKHIYRGQPRRH 196
Query: 236 LLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVL 295
LLTTGWS FV+ K LV+GDA +FLRG+ G+LR+G+RR + ++ +P S++S Q+ + VL
Sbjct: 197 LLTTGWSTFVASKRLVAGDAFVFLRGEHGQLRVGVRRLARQQSPMPSSVISSQSMHLGVL 256
Query: 296 SVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERR 355
+ ++AV T++MF V+Y PR + F++ KY++ + N + RFKMRFE DDSPERR
Sbjct: 257 ATASHAVMTRTMFLVYYKPRTSQ--FIVGLNKYLEAVNNKFSLSMRFKMRFEGDDSPERR 314
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSP 415
+G + G+ D+ W NS+WR L V+WDE ++VS WEI+ V+ L++ + P
Sbjct: 315 FSGTIVGVGDVSA-GWSNSQWRSLKVQWDEPATIPRPDRVSCWEIEPFVASTALNV-TQP 372
Query: 416 RMKKLRT 422
+K R+
Sbjct: 373 AVKGKRS 379
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDV 738
R+ TKV QG VGRA DL L+GY+DL+ ELE LF + G LR K W + +TD END+
Sbjct: 602 RTRTKVQMQGVAVGRAFDLTTLSGYDDLIDELEKLFEIRGELRSQDK-WAVTFTDDENDM 660
Query: 739 MVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
M+ GDDPW EFCN V +I I ++E+++KM
Sbjct: 661 MLAGDDPWPEFCNMVKRIFICSREDLKKM 689
>gi|6850874|emb|CAB71113.1| auxin response factor-like protein [Arabidopsis thaliana]
Length = 613
Score = 353 bits (905), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 181/377 (48%), Positives = 239/377 (63%), Gaps = 27/377 (7%)
Query: 47 SSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSS--AFPPIEVPNF 104
SSSS S +Y ELW CAGPL +P+ V YFPQGH+EQ+ +S+ E+P F
Sbjct: 12 SSSSRSYQDQLYTELWKVCAGPLVEVPRAQERVFYFPQGHMEQLVASTNQGINSEEIPVF 71
Query: 105 DLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSP 164
DL P+I C+V+DV L A E DEVY Q+ L P E Q E +D G P
Sbjct: 72 DLPPKILCRVLDVTLKAEHETDEVYAQITLQP---------EEDQSEPTSLDPPIVG--P 120
Query: 165 TKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRF 224
TK H F K LTASDTSTHGGFSV R+ A +C P LD Q P+QELV +DLHG EWRF
Sbjct: 121 TKQEFHSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQATPTQELVTRDLHGFEWRF 180
Query: 225 RHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSI 284
+HI+RGQPRRHLLTTGWS FVS K LV+GDA +FLRG++G+LR+G+RR + ++ +P S+
Sbjct: 181 KHIFRGQPRRHLLTTGWSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTSV 240
Query: 285 LSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKM 344
+S Q+ + VL+ ++AV T ++F VFY PR + F++ KY++ I + +GTRF+M
Sbjct: 241 ISSQSMHLGVLATASHAVRTTTIFVVFYKPRISQ--FIVGVNKYMEAIKHGFSLGTRFRM 298
Query: 345 RFEMDDSPER-----------RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQE 393
RFE ++SPER R G + G DL +WP SKWR L V+WDE +
Sbjct: 299 RFEGEESPERIVLDSETWNVFRFTGTIVGSGDLSS-QWPASKWRSLQVQWDEPTTVQRPD 357
Query: 394 QVSPWEIDRSVSLPPLS 410
+VSPWEI+ ++ P+S
Sbjct: 358 KVSPWEIEPFLATSPIS 374
Score = 106 bits (264), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 80/145 (55%), Gaps = 32/145 (22%)
Query: 653 TAAGCKLFGFSLTSETP----------------------TPSSQSPGK-----RSCTKVH 685
T +LFGF LTS +P TP+S S K RS TKV
Sbjct: 447 TNCSYRLFGFDLTSNSPAPIPQDKQPMDTCGAAKCQEPITPTSMSEQKKQQTSRSRTKVQ 506
Query: 686 KQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEG--LLRDPAKGWRILYTDSENDVMVVGD 743
QG VGRA+DL L Y++L+ ELE +F ++G L RD W +++TD E D+M+ GD
Sbjct: 507 MQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLLARD---KWIVVFTDDEGDMMLAGD 563
Query: 744 DPWHEFCNEVSKIHIYTQEEVEKMT 768
DPW+EFC KI IY+ +EV+KMT
Sbjct: 564 DPWNEFCKMAKKIFIYSSDEVKKMT 588
>gi|225030804|gb|ACN79515.1| auxin response factor 3a [Lotus japonicus]
Length = 679
Score = 352 bits (904), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 218/497 (43%), Positives = 284/497 (57%), Gaps = 85/497 (17%)
Query: 54 SSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCK 113
+SS+ ELWHACAGP+ LPKKG+VVVYFPQGHLE V P ++ P +FC+
Sbjct: 38 ASSVCLELWHACAGPMICLPKKGSVVVYFPQGHLELVQDLQLLLP------NIPPHVFCR 91
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFC 173
VVDV+L A + +DEVY QV L+P+ E L+ +++ G +EE STPHMFC
Sbjct: 92 VVDVKLHAEEGSDEVYCQVLLVPESEQVQQKLQEGEVDADGEEEEDTETMMKSSTPHMFC 151
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
KTLTASDTSTHGGFSVPRRAAEDCFPPLDY QQRPSQELVAKDLHG EW+FRHIYRG
Sbjct: 152 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYSQQRPSQELVAKDLHGREWKFRHIYRGVS- 210
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
L++ W QPR L + + + + N
Sbjct: 211 --LMSHVW---------------------------------QPRRHL---LTTGWSGFVN 232
Query: 294 VLSVVA-NAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSP 352
+V+ +AV +F RA+ ++F++P K++K + G RF+MRFE DD+
Sbjct: 233 KKKLVSGDAV-------LFL--RASSSEFIVPIHKFLKSLDYSYSAGMRFRMRFETDDAA 283
Query: 353 ERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID--RSVSLPPLS 410
ERRC G++ GITD+DP RWP SKW+CL+VRWD+ + + +VSPWEI+ S S+P
Sbjct: 284 ERRCAGLIVGITDVDPVRWPGSKWKCLLVRWDD-LEATRNNRVSPWEIEPSGSASIPNNL 342
Query: 411 IQSSPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDT 470
+ +S +K+ R GL + ++PV G G DF ES+R KVLQGQE G + G
Sbjct: 343 MAAS--LKRTRIGLPSTQLEFPV-PNGMGASDFGESLRFQKVLQGQEISGVDTTFDG--- 396
Query: 471 VNHPLGFEMRAPAHQSLALN---------GIRKDN----INELVRALPTSYTGFVESNRF 517
+ AP+HQS L GI I ++ + + GF ES RF
Sbjct: 397 --------INAPSHQSYELRRCYPGSNYPGISSTGSSIRIPQMSSDVSYNSIGFSESFRF 448
Query: 518 PKVLQGQEICPLRSLTG 534
KVLQGQEI P + G
Sbjct: 449 QKVLQGQEILPSQPYGG 465
>gi|301793215|emb|CBA11998.1| putative auxin response factor 8, partial [Cabomba aquatica]
Length = 795
Score = 352 bits (904), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 181/351 (51%), Positives = 238/351 (67%), Gaps = 13/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIE-VPNF-DLQPQIFCKVVDV 117
ELWHACAGPL LP + VVYFPQGH EQVA+S+ + VPN+ L PQ+ C++ DV
Sbjct: 13 ELWHACAGPLVCLPAISSRVVYFPQGHSEQVAASTNREVTDHVPNYPGLPPQLICQLHDV 72
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L ++ +D + E G PT + FCKTLT
Sbjct: 73 TMHADAETDEVYAQMTLQP--------LSPQEQKDAFLPAELG--IPTNQPTNYFCKTLT 122
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ QQ PSQEL+A+DLH VEW+FRHI+RGQP+RHLL
Sbjct: 123 ASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPSQELIARDLHDVEWKFRHIFRGQPKRHLL 182
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+V+F+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 183 TTGWSVFVSAKRLVTGDSVIFIWNEKNQLLLGIRRAARPQTVMPYSVLSSDSMHIGLLAA 242
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F VFY+PRA+ ++FVI KY+K + + +G RF+M FE ++S RR
Sbjct: 243 AAHAAATNSRFTVFYNPRASPSEFVISLVKYIKAVFQTRVSVGMRFRMLFETEESSVRRY 302
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +T I+DLDP RW NS WR + V WDE Q +VS WEI+ + P
Sbjct: 303 MGTITSISDLDPVRWANSHWRSVKVGWDESTAGIRQPRVSLWEIEPLTTFP 353
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 65/104 (62%), Gaps = 2/104 (1%)
Query: 671 PSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRI 729
P P ++ KV+K G VGR++D+ R + YN+L EL +F +EGLL DP + GW++
Sbjct: 678 PGQLDPHCQTFVKVYKSGC-VGRSLDIARFSSYNELRDELCQMFGLEGLLEDPQRSGWQL 736
Query: 730 LYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGTTD 773
+ D END++++GDDPW F N V I I + ++V++M D
Sbjct: 737 VLVDRENDILLMGDDPWEAFVNSVWSIKILSPQDVQQMGAQQND 780
>gi|359479836|ref|XP_002270286.2| PREDICTED: auxin response factor 23-like [Vitis vinifera]
Length = 801
Score = 352 bits (903), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 188/403 (46%), Positives = 254/403 (63%), Gaps = 18/403 (4%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKVV 115
+Y ELW CAGPL ++ + G VVYFPQGH+EQV A ++ +E+P ++L +IFCKVV
Sbjct: 136 LYTELWLGCAGPLVNILRAGQKVVYFPQGHIEQVEAYTNQDGQMEMPIYNLPSKIFCKVV 195
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKT 175
VQL A DEV+ QV LLP EAKQ E D P ++ + F KT
Sbjct: 196 YVQLKAEACTDEVFAQVTLLP---------EAKQ-EWQSPDHGNSQFFPRRTHSYSFSKT 245
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
LT SDT+THGGFSVP+R A++C PPLD QQ P QEL+AKDLHG EWRFRHI+RGQP+RH
Sbjct: 246 LTPSDTNTHGGFSVPKRHADECLPPLDMTQQPPVQELIAKDLHGTEWRFRHIFRGQPKRH 305
Query: 236 LLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVL 295
LLT+GWS FV+ K LV+GDA +FLRG +GELR+G+RR+ + +N + S+LS + +L
Sbjct: 306 LLTSGWSQFVTSKKLVAGDACIFLRGANGELRVGVRRATRLQNNVSASVLSGHSMQHGIL 365
Query: 296 SVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERR 355
+ +A+ST +MF V++ P T +F+IPY +Y+K N +GTRF+M FE ++ ++R
Sbjct: 366 ASAFHAISTGTMFTVYFRP-WTSPEFIIPYDQYIKSAENNYSVGTRFRMLFEGEECSQQR 424
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSP 415
C G + GI D+D RWPNS+WR V+WD + E+V+ W I+ + P
Sbjct: 425 CAGTIVGIEDVDAIRWPNSEWRRFKVQWDTSDITPCPERVAAWNIEPIEFIKKKHTSILP 484
Query: 416 RMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQEN 458
++K+ R P D A V D E + S VLQGQEN
Sbjct: 485 QLKRAR------PTDPLCPAIPILVGDVEHTKIQSGVLQGQEN 521
Score = 95.9 bits (237), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 63/93 (67%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDV 738
RSCTKV K G+ +GR+IDL R +GY++L+ EL+ +F+ G L D + W + YTD E D+
Sbjct: 707 RSCTKVLKYGTALGRSIDLARFDGYDELIIELDQMFDFGGSLMDGSCRWHVTYTDDEGDM 766
Query: 739 MVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGT 771
M++GD PW EF + V +I I +EE E++ T
Sbjct: 767 MLLGDYPWQEFRSMVQRIFICPKEETERLNSAT 799
>gi|296086637|emb|CBI32272.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 352 bits (902), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 188/403 (46%), Positives = 254/403 (63%), Gaps = 18/403 (4%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKVV 115
+Y ELW CAGPL ++ + G VVYFPQGH+EQV A ++ +E+P ++L +IFCKVV
Sbjct: 31 LYTELWLGCAGPLVNILRAGQKVVYFPQGHIEQVEAYTNQDGQMEMPIYNLPSKIFCKVV 90
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKT 175
VQL A DEV+ QV LLP EAKQ E D P ++ + F KT
Sbjct: 91 YVQLKAEACTDEVFAQVTLLP---------EAKQ-EWQSPDHGNSQFFPRRTHSYSFSKT 140
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
LT SDT+THGGFSVP+R A++C PPLD QQ P QEL+AKDLHG EWRFRHI+RGQP+RH
Sbjct: 141 LTPSDTNTHGGFSVPKRHADECLPPLDMTQQPPVQELIAKDLHGTEWRFRHIFRGQPKRH 200
Query: 236 LLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVL 295
LLT+GWS FV+ K LV+GDA +FLRG +GELR+G+RR+ + +N + S+LS + +L
Sbjct: 201 LLTSGWSQFVTSKKLVAGDACIFLRGANGELRVGVRRATRLQNNVSASVLSGHSMQHGIL 260
Query: 296 SVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERR 355
+ +A+ST +MF V++ P T +F+IPY +Y+K N +GTRF+M FE ++ ++R
Sbjct: 261 ASAFHAISTGTMFTVYFRP-WTSPEFIIPYDQYIKSAENNYSVGTRFRMLFEGEECSQQR 319
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSP 415
C G + GI D+D RWPNS+WR V+WD + E+V+ W I+ + P
Sbjct: 320 CAGTIVGIEDVDAIRWPNSEWRRFKVQWDTSDITPCPERVAAWNIEPIEFIKKKHTSILP 379
Query: 416 RMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQEN 458
++K+ R P D A V D E + S VLQGQEN
Sbjct: 380 QLKRAR------PTDPLCPAIPILVGDVEHTKIQSGVLQGQEN 416
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 63/93 (67%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDV 738
RSCTKV K G+ +GR+IDL R +GY++L+ EL+ +F+ G L D + W + YTD E D+
Sbjct: 602 RSCTKVLKYGTALGRSIDLARFDGYDELIIELDQMFDFGGSLMDGSCRWHVTYTDDEGDM 661
Query: 739 MVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGT 771
M++GD PW EF + V +I I +EE E++ T
Sbjct: 662 MLLGDYPWQEFRSMVQRIFICPKEETERLNSAT 694
>gi|301793225|emb|CBA12003.1| putative auxin response factor 6/8 [Ginkgo biloba]
Length = 924
Score = 352 bits (902), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 179/349 (51%), Positives = 239/349 (68%), Gaps = 13/349 (3%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCK 113
S+ ELWHACAGPL LP G+ VVYFPQGH EQVA+S+ +PN+ +L PQ+ C+
Sbjct: 16 SLNSELWHACAGPLVLLPVVGSHVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQLICQ 75
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFC 173
+ +V L A+ E DEVY Q+ L P L ++ ++ + G +P+ + FC
Sbjct: 76 LHNVTLQADVETDEVYAQMTLQP--------LNPQEPKESYLAPALG--TPSGQPTNYFC 125
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
KTLTASDTSTHGGFS+PRRAAE FP LD+ QQ P QEL+A+DLH EW+FRHIYRGQP+
Sbjct: 126 KTLTASDTSTHGGFSIPRRAAEKVFPLLDFTQQPPVQELIARDLHDTEWKFRHIYRGQPK 185
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
RHLLTTGWS+FVS K LV+GD+VLF+R G+L LGIRR+ + + +P S+LS + +
Sbjct: 186 RHLLTTGWSVFVSAKRLVAGDSVLFIRNDKGQLLLGIRRANRAQMVMPSSVLSSDSMHIG 245
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSP 352
VL+ A+A ST F +FY+PRA+ ++FV+P K+ K + + + IG RF+M FE ++S
Sbjct: 246 VLAAAAHAASTNCRFTIFYNPRASPSEFVVPLAKFEKAVYHTRVSIGMRFRMLFETEEST 305
Query: 353 ERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
RR G +TGI DLDPYRW NS+WR + V WDE + Q +VS WEI+
Sbjct: 306 VRRYMGTITGIGDLDPYRWRNSQWRSIKVGWDESTAGERQPRVSLWEIE 354
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 67/95 (70%), Gaps = 2/95 (2%)
Query: 675 SPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTD 733
+P R+ TKV+K GS VGR++D+ R NGY +L +EL+ +F +EG L DP + GW++++ D
Sbjct: 788 NPPTRTFTKVYKLGS-VGRSLDVTRFNGYQELRAELDRMFGLEGQLEDPQRSGWQLVFVD 846
Query: 734 SENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
E DV+++GDDPW EF N V I I + EV +M+
Sbjct: 847 KEKDVLLLGDDPWEEFVNSVRFIKILSPPEVMQMS 881
>gi|224056403|ref|XP_002298839.1| predicted protein [Populus trichocarpa]
gi|222846097|gb|EEE83644.1| predicted protein [Populus trichocarpa]
Length = 884
Score = 352 bits (902), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 195/410 (47%), Positives = 266/410 (64%), Gaps = 25/410 (6%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPP-IEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VYFPQGH EQVA+S+ ++P++ L Q+ C++ +V
Sbjct: 23 ELWHACAGPLVSLPAVGSRAVYFPQGHSEQVAASTNKEVNAQIPSYPSLPAQLICQLHNV 82
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQL-EDLGVDEEGGGRSPTKSTPHMFCKTL 176
+ A+ E DEVY Q+ L P L +A L D+G +P+K + FCKTL
Sbjct: 83 TMHADVETDEVYAQMTLQP---LSPQEQKAAYLPADMG--------TPSKQPTNYFCKTL 131
Query: 177 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHL 236
TASDTSTHGGFSVPRRAAE FPPLD+ Q P+QEL+A+DLH EW+FRHI+RGQP+RHL
Sbjct: 132 TASDTSTHGGFSVPRRAAEKVFPPLDFSQHPPAQELIARDLHDNEWKFRHIFRGQPKRHL 191
Query: 237 LTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLS 296
LTTGWS+FVS K LV+GD+VLF+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 192 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRATRPQTVMPSSVLSSDSMHLGLLA 251
Query: 297 VVANAVSTKSMFHVFYSPRATHADFVIPYQKYVK-IIMNPICIGTRFKMRFEMDDSPERR 355
A+A +T S F +FY+PRA+ ++FVIP KY+K + + +G RF+M FE ++S RR
Sbjct: 252 AAAHAAATNSRFTIFYNPRASPSEFVIPLAKYLKAVYYTRVSVGMRFRMMFETEESSVRR 311
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSP 415
G +TGI+DLD RWPNS+WR + V WDE + Q +VS WEI+ + P + P
Sbjct: 312 YMGTITGISDLDVVRWPNSQWRSVKVGWDESTDGERQPRVSLWEIEPLTTFP-----TYP 366
Query: 416 RMKKLRTGLQAP-PPDYPVSARGGGVLDFEESVRSSKV-LQGQENVGFVS 463
LR L+ P PP P S G G+ D + S + L+G + G+ S
Sbjct: 367 SPFPLR--LKRPWPPGLP-SFHGLGIKDDDLGKNPSLMWLRGDGDCGYQS 413
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 67/101 (66%), Gaps = 2/101 (1%)
Query: 668 TPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-G 726
T S +P R+ KV+K GS GR++D+ + + YN+L SEL +F +EG L DP + G
Sbjct: 740 TENASQGNPPTRTFVKVYKSGSF-GRSLDITKFSSYNELRSELSRMFGLEGQLEDPLRSG 798
Query: 727 WRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
W++++ D ENDV+++GD PW EF N V I I + +EV++M
Sbjct: 799 WQLVFIDRENDVLLLGDGPWPEFVNSVWYIKILSPQEVQQM 839
>gi|224085433|ref|XP_002307574.1| predicted protein [Populus trichocarpa]
gi|222857023|gb|EEE94570.1| predicted protein [Populus trichocarpa]
Length = 372
Score = 351 bits (901), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 180/351 (51%), Positives = 241/351 (68%), Gaps = 12/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA+S+ +PN+ L PQ+ C++ +V
Sbjct: 8 ELWHACAGPLVSLPHVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPSLPPQLICQLHNV 67
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L+ + ++ L E G +K + FCKTLT
Sbjct: 68 TMHADVETDEVYAQMTLQP------LSQDDQKDAYLLPAELGTA---SKQPTNYFCKTLT 118
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FP LDY Q P+QEL+A+DLH EW+FRHI+RGQP+RHLL
Sbjct: 119 ASDTSTHGGFSVPRRAAEKVFPTLDYSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLL 178
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+VLF+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 179 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTFMPSSVLSSDSMHIGLLAA 238
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F +FY+PRA+ ++FVIP KY+K + + + +G RF+M FE ++S RR
Sbjct: 239 AAHAAATNSRFTIFYNPRASPSEFVIPLVKYIKAVYHTRVSVGMRFRMLFETEESSVRRY 298
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI+DLDP RWPNS WR + V WDE + Q +VS WEI+ + P
Sbjct: 299 MGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 349
>gi|115489558|ref|NP_001067266.1| Os12g0613700 [Oryza sativa Japonica Group]
gi|122203162|sp|Q2QM84.1|ARFY_ORYSJ RecName: Full=Auxin response factor 25; AltName: Full=OsARF6b
gi|77556604|gb|ABA99400.1| Auxin response factor 6, putative, expressed [Oryza sativa Japonica
Group]
gi|113649773|dbj|BAF30285.1| Os12g0613700 [Oryza sativa Japonica Group]
gi|125580063|gb|EAZ21209.1| hypothetical protein OsJ_36859 [Oryza sativa Japonica Group]
Length = 899
Score = 351 bits (901), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 178/351 (50%), Positives = 242/351 (68%), Gaps = 13/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP + VVYFPQGH EQVA+S+ ++PN+ +L PQ+ C++ +V
Sbjct: 28 ELWHACAGPLVSLPVVRSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLICQLHNV 87
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L+ E ++ L ++ + PT + FCKTLT
Sbjct: 88 TMHADAETDEVYAQMTLQP------LSPEEQKEPFLPMELGAASKQPT----NYFCKTLT 137
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+A+DLH EW+FRHI+RGQP+RHLL
Sbjct: 138 ASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLL 197
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+V+F+ + +L LGIRR+ + + +P S+LS + + +L+
Sbjct: 198 TTGWSVFVSAKRLVAGDSVIFIWNDNNQLLLGIRRANRQQTVMPSSVLSSDSMHIGLLAA 257
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F +FY+PRA+ ++FVIP KYVK + + + +G RF+M FE ++S RR
Sbjct: 258 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRY 317
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +T I+DLD RWPNS WR + V WDE D Q +VS WEI+ + P
Sbjct: 318 MGTITSISDLDSVRWPNSHWRSVKVGWDESTTGDKQPRVSLWEIEPLTTFP 368
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 64/90 (71%), Gaps = 2/90 (2%)
Query: 682 TKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMV 740
KV+K GSL GR++D+ R + Y +L SELE LF +EG L DP + GW++++ D END+++
Sbjct: 769 VKVYKSGSL-GRSLDISRFSSYCELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDILL 827
Query: 741 VGDDPWHEFCNEVSKIHIYTQEEVEKMTIG 770
VGDDPW EF N V I I + +EV+++ G
Sbjct: 828 VGDDPWQEFANSVWCIKILSPQEVQQLVRG 857
>gi|125537393|gb|EAY83881.1| hypothetical protein OsI_39101 [Oryza sativa Indica Group]
Length = 899
Score = 351 bits (901), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 178/351 (50%), Positives = 242/351 (68%), Gaps = 13/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP + VVYFPQGH EQVA+S+ ++PN+ +L PQ+ C++ +V
Sbjct: 28 ELWHACAGPLVSLPVVRSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLICQLHNV 87
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L+ E ++ L ++ + PT + FCKTLT
Sbjct: 88 TMHADAETDEVYAQMTLQP------LSPEEQKEPFLPMELGAASKQPT----NYFCKTLT 137
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+A+DLH EW+FRHI+RGQP+RHLL
Sbjct: 138 ASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLL 197
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+V+F+ + +L LGIRR+ + + +P S+LS + + +L+
Sbjct: 198 TTGWSVFVSAKRLVAGDSVIFIWNDNNQLLLGIRRANRQQTVMPSSVLSSDSMHIGLLAA 257
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F +FY+PRA+ ++FVIP KYVK + + + +G RF+M FE ++S RR
Sbjct: 258 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRY 317
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +T I+DLD RWPNS WR + V WDE D Q +VS WEI+ + P
Sbjct: 318 MGTITSISDLDSVRWPNSHWRSVKVGWDESTTGDKQPRVSLWEIEPLTTFP 368
Score = 95.5 bits (236), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 64/90 (71%), Gaps = 2/90 (2%)
Query: 682 TKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMV 740
KV+K GSL GR++D+ R + Y +L SELE LF +EG L DP + GW++++ D END+++
Sbjct: 769 VKVYKSGSL-GRSLDISRFSSYCELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDILL 827
Query: 741 VGDDPWHEFCNEVSKIHIYTQEEVEKMTIG 770
VGDDPW EF N V I I + +EV+++ G
Sbjct: 828 VGDDPWQEFANSVWCIKILSPQEVQQLVRG 857
>gi|302806465|ref|XP_002984982.1| hypothetical protein SELMODRAFT_451395 [Selaginella moellendorffii]
gi|300147192|gb|EFJ13857.1| hypothetical protein SELMODRAFT_451395 [Selaginella moellendorffii]
Length = 835
Score = 351 bits (900), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 184/344 (53%), Positives = 230/344 (66%), Gaps = 12/344 (3%)
Query: 61 LWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNF-DLQPQIFCKVVDVQ 118
LW CAGPL +LP G+ VVYFPQGH EQV AS+ EVP++ +L PQ+FC + ++
Sbjct: 19 LWLECAGPLITLPAIGSQVVYFPQGHSEQVIASTHKEADFEVPSYPNLPPQLFCILHNIT 78
Query: 119 LLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTA 178
L A++ENDEV+ Q+ L P + L + L D G+ TK T F KTLTA
Sbjct: 79 LHADQENDEVFAQMTLQPFSQTALLK-DPFLLPDFGIQ--------TKQTIVSFSKTLTA 129
Query: 179 SDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLT 238
SDTSTHGGFS+PRRAAE FPPLD+ + P+QELVA+DLH EW FRHIYRGQPRRHLLT
Sbjct: 130 SDTSTHGGFSIPRRAAEKVFPPLDFTKTPPAQELVARDLHNNEWHFRHIYRGQPRRHLLT 189
Query: 239 TGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVV 298
TGWS+FVS K L +GD VLFLR + G+ LGIRR+ + + LP S+LS + VL+
Sbjct: 190 TGWSVFVSAKRLQAGDTVLFLRDEQGQHMLGIRRANRQQTNLPTSLLSSDSMLIGVLAAA 249
Query: 299 ANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRCN 357
A+A ST S F +FY+PRA+ ++FVIP KY K + P + +G RF+M E +DS RR
Sbjct: 250 AHAASTNSRFTIFYNPRASPSEFVIPLAKYQKALHPPQLTVGMRFRMEMETEDSSTRRYM 309
Query: 358 GVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
G +TGI DLDP RWPNS WR L V WDE Q +VS WEI+
Sbjct: 310 GTITGIGDLDPVRWPNSHWRSLKVGWDESTAGQKQRRVSAWEIE 353
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 71/126 (56%), Gaps = 8/126 (6%)
Query: 646 KDGSFNGTAAGCKLFGFSLTSETPTPS----SQSPGKRSCTKVHKQGSLVGRAIDLWRLN 701
K F+G A L + + P PS P R+ TKVHK GS VGR++D+ R
Sbjct: 638 KPKDFSGAQADIALLHAAEENGVPQPSWPQQVYPPPVRTFTKVHKVGS-VGRSLDITRFK 696
Query: 702 GYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQ 761
Y++L +EL +F GL D GW++++ D+END++++GDDPW EF V I I +
Sbjct: 697 NYHELRNELTRMF---GLEHDHKSGWQLVFIDNENDMLLLGDDPWDEFIGCVKSIRILSS 753
Query: 762 EEVEKM 767
E+ +M
Sbjct: 754 SEILQM 759
>gi|356504181|ref|XP_003520877.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 662
Score = 351 bits (900), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 181/371 (48%), Positives = 245/371 (66%), Gaps = 22/371 (5%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKVV 115
+Y +LW CAGPL +P++G V YFPQGH+EQ+ AS++ E+P+F+L P+I C+VV
Sbjct: 9 LYTQLWKLCAGPLVDVPRQGERVFYFPQGHMEQLQASTNQGLNQEIPHFNLPPKILCRVV 68
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSP---TKSTPHMF 172
+QLLA +E DEVY ++ LLP E+ Q E D SP K H F
Sbjct: 69 HIQLLAEQETDEVYARITLLP---------ESNQEEPTSPDP-----SPPETQKQVFHTF 114
Query: 173 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQP 232
K LTASDTSTHGGFSV RR A +C P LD Q PSQELVA+DLHG EW+F+HI+RGQP
Sbjct: 115 SKILTASDTSTHGGFSVLRRHATECLPQLDMTQTTPSQELVAEDLHGFEWKFKHIFRGQP 174
Query: 233 RRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYP 292
RRHLLTTGWS FV+ K LV+GDA +FLRG++GELR+G+RR + ++ +P S++S Q+ +
Sbjct: 175 RRHLLTTGWSTFVTSKKLVAGDAFVFLRGENGELRVGVRRVARQQSPMPSSVISSQSMHL 234
Query: 293 NVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSP 352
VL+ ++A T +MF V+Y PR + F+I KY++ N +G RFKMRFE++DSP
Sbjct: 235 GVLATASHAFLTSTMFVVYYKPRTSQ--FIIGVNKYLEAENNKFSVGMRFKMRFEVEDSP 292
Query: 353 ERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSI- 411
ERR +G + G+ D+ P W NS+WR L V+WDE E+VS WEI+ + L++
Sbjct: 293 ERRFSGTIVGVGDVSPGWW-NSQWRSLKVQWDEPAIIPRPERVSSWEIEPFAASTALNVT 351
Query: 412 QSSPRMKKLRT 422
Q + K+ RT
Sbjct: 352 QQLVKSKRSRT 362
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 670 TPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRI 729
+PS+ R+ TKV QG VGRA+DL L Y+DL+ ELE +F+++G L+ K W I
Sbjct: 547 SPSASQRHTRTRTKVQMQGIAVGRAVDLTVLKDYDDLIDELEKMFDIKGELQMQTK-WAI 605
Query: 730 LYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEV 764
+TD ND+M+VGDDPW EFC V +I I ++E+V
Sbjct: 606 TFTDDGNDMMLVGDDPWPEFCTVVKRIFICSREDV 640
>gi|302808955|ref|XP_002986171.1| hypothetical protein SELMODRAFT_451397 [Selaginella moellendorffii]
gi|300146030|gb|EFJ12702.1| hypothetical protein SELMODRAFT_451397 [Selaginella moellendorffii]
Length = 826
Score = 351 bits (900), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 187/358 (52%), Positives = 235/358 (65%), Gaps = 12/358 (3%)
Query: 47 SSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNF- 104
SS + +I LW CAGPL +LP G+ VVYFPQGH EQV AS+ EVP++
Sbjct: 5 SSLTGGDKKAINQALWLECAGPLITLPAIGSQVVYFPQGHSEQVIASTHKEADFEVPSYP 64
Query: 105 DLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSP 164
+L PQ+FC + ++ L A++ENDEV+ Q+ L P + L + L D G+
Sbjct: 65 NLPPQLFCILHNITLHADQENDEVFAQMTLQPFSQTALLK-DPFLLPDFGIQ-------- 115
Query: 165 TKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRF 224
TK T F KTLTASDTSTHGGFS+PRRAAE FPPLD+ + P+QELVA+DLH EW F
Sbjct: 116 TKQTIVSFSKTLTASDTSTHGGFSIPRRAAEKVFPPLDFTKTPPAQELVARDLHNNEWHF 175
Query: 225 RHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSI 284
RHIYRGQPRRHLLTTGWS+FVS K L +GD VLFLR + G+ LGIRR+ + + LP S+
Sbjct: 176 RHIYRGQPRRHLLTTGWSVFVSAKRLQAGDTVLFLRDEQGQHMLGIRRANRQQTNLPTSL 235
Query: 285 LSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFK 343
LS + VL+ A+A ST S F +FY+PRA+ ++FVIP KY K + P + +G RF+
Sbjct: 236 LSSDSMLIGVLAAAAHAASTNSRFTIFYNPRASPSEFVIPLAKYQKALHPPQLTVGMRFR 295
Query: 344 MRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
M E +DS RR G +TGI DLDP RWPNS WR L V WDE Q +VS WEI+
Sbjct: 296 MEMETEDSSTRRYMGTITGIGDLDPVRWPNSHWRSLKVGWDESTAGQKQRRVSAWEIE 353
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 70/126 (55%), Gaps = 8/126 (6%)
Query: 646 KDGSFNGTAAGCKLFGFSLTSETPTPS----SQSPGKRSCTKVHKQGSLVGRAIDLWRLN 701
K F+G L + + P PS P R+ TKVHK GS VGR++D+ R
Sbjct: 626 KPKDFSGAQPDIALLHAAEENGVPQPSWPQQVYPPPVRTFTKVHKVGS-VGRSLDITRFK 684
Query: 702 GYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQ 761
Y++L +EL +F GL D GW++++ D+END++++GDDPW EF V I I +
Sbjct: 685 NYHELRNELTRMF---GLEHDHKSGWQLVFIDNENDMLLLGDDPWDEFIGCVKSIRILSS 741
Query: 762 EEVEKM 767
E+ +M
Sbjct: 742 SEILQM 747
>gi|19352043|dbj|BAB85915.1| auxin response factor 6b [Oryza sativa]
Length = 880
Score = 351 bits (900), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 178/351 (50%), Positives = 242/351 (68%), Gaps = 13/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP + VVYFPQGH EQVA+S+ ++PN+ +L PQ+ C++ +V
Sbjct: 9 ELWHACAGPLVSLPVVRSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLICQLHNV 68
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L+ E ++ L ++ + PT + FCKTLT
Sbjct: 69 TMHADAETDEVYAQMTLQP------LSPEEQKEPFLPMELGAASKQPT----NYFCKTLT 118
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+A+DLH EW+FRHI+RGQP+RHLL
Sbjct: 119 ASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLL 178
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+V+F+ + +L LGIRR+ + + +P S+LS + + +L+
Sbjct: 179 TTGWSVFVSAKRLVAGDSVIFIWNDNNQLLLGIRRANRQQTVMPSSVLSSDSMHIGLLAA 238
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F +FY+PRA+ ++FVIP KYVK + + + +G RF+M FE ++S RR
Sbjct: 239 AAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRY 298
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +T I+DLD RWPNS WR + V WDE D Q +VS WEI+ + P
Sbjct: 299 MGTITSISDLDSVRWPNSHWRSVKVGWDESTTGDKQPRVSLWEIEPLTTFP 349
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 64/90 (71%), Gaps = 2/90 (2%)
Query: 682 TKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMV 740
KV+K GSL GR++D+ R + Y +L SELE LF +EG L DP + GW++++ D END+++
Sbjct: 750 VKVYKSGSL-GRSLDISRFSSYCELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDILL 808
Query: 741 VGDDPWHEFCNEVSKIHIYTQEEVEKMTIG 770
VGDDPW EF N V I I + +EV+++ G
Sbjct: 809 VGDDPWQEFANSVWCIKILSPQEVQQLVRG 838
>gi|381149271|gb|AFF60411.1| auxin response factor 8 [Nicotiana tabacum]
Length = 843
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 177/351 (50%), Positives = 240/351 (68%), Gaps = 13/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
EL HACAGPL LP G+ VVYFPQGH EQVA+++ +PN+ +L PQ+ C++ +V
Sbjct: 23 ELRHACAGPLVCLPTVGSRVVYFPQGHSEQVAATTNKEVDAHIPNYPNLPPQLICQLHNV 82
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L ++ +D + E G P++ + FCKTLT
Sbjct: 83 TMHADVETDEVYAQMTLQP--------LTRQEQKDTYLPVELG--IPSRQPTNYFCKTLT 132
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ Q P QEL+A+DLH +EW+FRHI+RGQP+RHLL
Sbjct: 133 ASDTSTHGGFSVPRRAAEKVFPPLDFSQTPPCQELIARDLHDIEWKFRHIFRGQPKRHLL 192
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+VLF+ K +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 193 TTGWSVFVSAKRLVAGDSVLFIWNKKNQLLLGIRRATRPQTVMPSSVLSSDSMHIGLLAA 252
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F VF++PRA+ ++FVIP KY+K + + + +G RF+M FE ++S RR
Sbjct: 253 AAHAAATNSCFTVFFNPRASPSEFVIPLSKYIKAVYHTRVSVGMRFRMLFETEESSVRRY 312
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI DLDP RW NS WR + V WDE + Q +VS WEI+ + P
Sbjct: 313 MGTITGIGDLDPVRWANSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 363
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 62/90 (68%), Gaps = 2/90 (2%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSEND 737
R+ KV+K GS VGR++D+ R N Y++L EL +F +EG L DP + GW++++ D END
Sbjct: 717 RTFVKVYKSGS-VGRSLDITRFNSYHELRQELGQMFGIEGFLEDPQRSGWQLVFVDREND 775
Query: 738 VMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
V+++GDDPW F N V I I + E+V K+
Sbjct: 776 VLLLGDDPWEAFVNNVWYIKILSPEDVLKL 805
>gi|255555629|ref|XP_002518850.1| hypothetical protein RCOM_1311830 [Ricinus communis]
gi|223541837|gb|EEF43383.1| hypothetical protein RCOM_1311830 [Ricinus communis]
Length = 694
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 187/394 (47%), Positives = 255/394 (64%), Gaps = 16/394 (4%)
Query: 45 ANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPN 103
+ +S S +Y ELW ACAGPL +PK G V YFPQGH+EQ+ AS++ VP
Sbjct: 10 SQGNSEGSCGDDLYTELWKACAGPLVDVPKDGERVFYFPQGHMEQLEASTNQELNQRVPL 69
Query: 104 FDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRS 163
F+L +I C+V+++ LLA ++ DEVY Q+ LLP E+ Q E D S
Sbjct: 70 FNLPSKILCRVINIHLLAEQDTDEVYAQITLLP---------ESDQTEPTSPDPSPAEPS 120
Query: 164 PTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWR 223
+ H FCK LTASDTSTHGGFSV R+ A +C P LD Q P+QELVAKDLHG EWR
Sbjct: 121 -RRPAVHSFCKVLTASDTSTHGGFSVLRKHATECLPQLDMTQPTPTQELVAKDLHGYEWR 179
Query: 224 FRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDS 283
F+HI+RGQPRRHLLTTGWS FV+ K LV+GD+ +FLRG++GELR+G+RR + ++ +P S
Sbjct: 180 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVRRLARQQSSMPSS 239
Query: 284 ILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFK 343
++S Q+ + VL+ ++AV+T+++F V+Y PR + F+I KY++ I N +G RFK
Sbjct: 240 VISSQSMHLGVLATASHAVATQTLFVVYYKPRTSQ--FIISLNKYLEAINNKFSVGMRFK 297
Query: 344 MRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID-R 402
MRFE +DSPERR +G + G+ D P+ W +SKWR L V+WDE ++VSPWEI+
Sbjct: 298 MRFEGEDSPERRFSGTIVGVEDFSPH-WLDSKWRQLKVQWDEPASIPRPDKVSPWEIEPF 356
Query: 403 SVSLPPLSIQSSP-RMKKLRTGLQAPPPDYPVSA 435
S S P Q P + K+ R ++ P D +A
Sbjct: 357 SASAPSNISQPVPLKNKRPRPPIEVPTLDLSSTA 390
Score = 107 bits (267), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 52/97 (53%), Positives = 66/97 (68%), Gaps = 1/97 (1%)
Query: 675 SPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDS 734
S RS TKV QG VGRAIDL + GYN LL ELE +F+++G L P W I+YTD
Sbjct: 578 SASTRSRTKVQMQGVAVGRAIDLTMIKGYNQLLDELEEMFDIKGQLH-PRDKWEIVYTDD 636
Query: 735 ENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGT 771
E D+M+VGDDPW EFCN V +I I + ++V+KM G+
Sbjct: 637 EGDMMLVGDDPWPEFCNMVRRIFICSSQDVKKMMPGS 673
>gi|359492211|ref|XP_003634382.1| PREDICTED: auxin response factor 5-like isoform 2 [Vitis vinifera]
Length = 947
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 182/356 (51%), Positives = 238/356 (66%), Gaps = 18/356 (5%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPI-EVPNF-DLQPQIFCK 113
+I ELWHACAGPL SLP+ G++V YFPQGH EQVA S+ ++PN+ +L Q+ C+
Sbjct: 40 AINSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTKRTATSQIPNYPNLPSQLMCQ 99
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAK--QLEDLGVDEEGGGRSPTKSTPHM 171
V +V L A+K+ DE+Y Q++L P +N E + D G+ P+K
Sbjct: 100 VHNVTLHADKDTDEIYAQMSLQP------VNSEKDIFPIPDFGL-------KPSKHPSEF 146
Query: 172 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQ 231
FCKTLTASDTSTHGGFSVPRRAAE FPPLDY Q P+QEL+ +DLH + + FRHIYRGQ
Sbjct: 147 FCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYSMQPPTQELIVRDLHDITYTFRHIYRGQ 206
Query: 232 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSY 291
P+RHLLTTGWS+FVS K L +GDAVLF+R + +L LG+RR+ + + LP S+LS + +
Sbjct: 207 PKRHLLTTGWSVFVSAKRLRAGDAVLFIRDEKSQLLLGVRRANRQQTSLPSSVLSADSMH 266
Query: 292 PNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIM-NPICIGTRFKMRFEMDD 350
VL+ A+A + +S F +FY+PRA ++FVIP KY K + I +G RF M FE ++
Sbjct: 267 IGVLAAAAHAAANRSPFTIFYNPRACPSEFVIPLAKYRKSVYGTQISVGMRFGMMFETEE 326
Query: 351 SPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSL 406
S +RR G + GI+DLDP WP SKWR L V WDE D Q +VS WEI+ SL
Sbjct: 327 SGKRRYMGTIVGISDLDPLSWPGSKWRNLQVEWDESGCGDKQSRVSSWEIETPESL 382
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
Query: 676 PGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRD-PAKGWRILYTDS 734
P R+ TKV K GS VGR+ID+ Y +L S +E +F +EGLL D GW+++Y D
Sbjct: 834 PPMRTYTKVQKMGS-VGRSIDVASFKNYEELCSAIECMFGLEGLLNDQKGSGWKLVYVDY 892
Query: 735 ENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
ENDV++VGDDPW EF V I I + EV++M+
Sbjct: 893 ENDVLLVGDDPWKEFVGCVRCIRILSPSEVQQMS 926
>gi|359359130|gb|AEV41036.1| putative auxin response factor [Oryza minuta]
Length = 818
Score = 350 bits (899), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 178/352 (50%), Positives = 240/352 (68%), Gaps = 15/352 (4%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIE--VPNF-DLQPQIFCKVVD 116
ELWHACAGPL LP G VVYFPQGH EQVA+S+ +E +PN+ +L Q+ C++ D
Sbjct: 30 ELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTN-KEVEGHIPNYPNLPAQLICQLHD 88
Query: 117 VQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTL 176
V + A+ E DEVY Q+ L P L ++ D + E G S K + FCKTL
Sbjct: 89 VTMHADVETDEVYAQMTLQP--------LNPQEQNDAYLPAEMGIMS--KQPTNYFCKTL 138
Query: 177 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHL 236
TASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+A+D+H +EW+FRHI+RGQP+RHL
Sbjct: 139 TASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHL 198
Query: 237 LTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLS 296
LTTGWSIFVS K LV+GD+VLF+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 199 LTTGWSIFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLA 258
Query: 297 VVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERR 355
A+A +T S F +FY+PRA+ ++FVIP KY+K + + I +G RF+M FE ++S RR
Sbjct: 259 AAAHAAATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRR 318
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +T ++D DP RWP+S WR + V WDE + +VS WEI+ + P
Sbjct: 319 YMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFP 370
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Query: 676 PGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDS 734
P R+ KV+K GS VGR++D+ R + Y +L EL +F ++G L DP + GW++++ D
Sbjct: 716 PTTRTFVKVYKSGS-VGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDR 774
Query: 735 ENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
ENDV+++GDDPW F N V I I + E+V KM
Sbjct: 775 ENDVLLLGDDPWESFVNSVWYIKILSPEDVHKM 807
>gi|224058145|ref|XP_002299455.1| predicted protein [Populus trichocarpa]
gi|222846713|gb|EEE84260.1| predicted protein [Populus trichocarpa]
Length = 537
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 196/424 (46%), Positives = 270/424 (63%), Gaps = 28/424 (6%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKVV 115
+Y ELW ACAGPL +PK+G V YFPQGH+EQ+ AS++ VP F+L +I C+V+
Sbjct: 3 LYTELWKACAGPLVDVPKRGERVFYFPQGHMEQLEASTNQELNQRVPLFNLPSKILCRVI 62
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKT 175
QLLA ++ DEVY Q+ L+P E+ Q+E + P + T H FCK
Sbjct: 63 HTQLLAEQDTDEVYAQITLIP---------ESDQIE--PTSPDSSSSEPPRPTVHSFCKV 111
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
LTASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG EWRF+HI+RGQPRRH
Sbjct: 112 LTASDTSTHGGFSVLRKHATECLPPLDMTQPTPTQELVAKDLHGYEWRFKHIFRGQPRRH 171
Query: 236 LLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVL 295
LLTTGWS FV+ K LV+GD+ +FLRG++GELR+G+RR ++ +P S++S Q+ + VL
Sbjct: 172 LLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVRRVACQQSSMPSSVISSQSMHLGVL 231
Query: 296 SVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERR 355
+ ++AVST ++F V+Y PR + F+I KY++ + N +G RFKMRFE +DSP+RR
Sbjct: 232 ATASHAVSTLTLFVVYYKPRTSQ--FIISLNKYLEAVSNKFVVGMRFKMRFEGEDSPDRR 289
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPP--LSIQS 413
+G + G+ D P+ W +SKWR L V+WDE ++VSPWEI+ V+ P LS
Sbjct: 290 FSGTIVGVEDFSPH-WNDSKWRSLKVQWDEPAPIPRPDRVSPWEIEPCVASVPTNLSQPV 348
Query: 414 SPRMKKLRTGLQAPPPDY--PVSARG--GGVLDFEESVRSSKVLQGQENVGFVSPLYGCD 469
+ + K+ R + P Y P+S++ +LD + R S+V L+G D
Sbjct: 349 TQKNKRPRPPFEIPALGYSTPLSSKSKNDAILDPSDKGRKSEVPTSYR-------LFGID 401
Query: 470 TVNH 473
VNH
Sbjct: 402 LVNH 405
Score = 103 bits (258), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
Query: 675 SPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDS 734
S RS TKV QG VGRA+DL L GY+ L+ ELE LF+++G L P W I+YTD
Sbjct: 446 STSTRSRTKVQMQGIAVGRAVDLTMLKGYSQLIDELEQLFDIKGQLH-PRDKWEIVYTDD 504
Query: 735 ENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
E D+M+VGDDPW EFCN V +I+I + ++V++M
Sbjct: 505 EGDMMLVGDDPWPEFCNMVRRIYICSSQDVKRM 537
>gi|359359176|gb|AEV41081.1| putative auxin response factor [Oryza minuta]
Length = 821
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 177/352 (50%), Positives = 240/352 (68%), Gaps = 15/352 (4%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIE--VPNF-DLQPQIFCKVVD 116
ELWHACAGPL LP G VVYFPQGH EQVA+S+ +E +PN+ +L Q+ C++ D
Sbjct: 30 ELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTN-KEVEGHIPNYPNLPAQLICQLHD 88
Query: 117 VQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTL 176
V + A+ E DEVY Q+ L P L ++ D + E G S K + FCKTL
Sbjct: 89 VTMHADVETDEVYAQMTLQP--------LNPQEQNDAYLPAEMGIMS--KQPTNYFCKTL 138
Query: 177 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHL 236
TASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+A+D+H +EW+FRHI+RGQP+RHL
Sbjct: 139 TASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHL 198
Query: 237 LTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLS 296
LTTGWS+FVS K LV+GD+VLF+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 199 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLA 258
Query: 297 VVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERR 355
A+A +T S F +FY+PRA+ ++FVIP KY+K + + I +G RF+M FE ++S RR
Sbjct: 259 AAAHAAATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRR 318
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +T ++D DP RWP+S WR + V WDE + +VS WEI+ + P
Sbjct: 319 YMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFP 370
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Query: 676 PGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDS 734
P R+ KV+K GS VGR++D+ R + Y +L EL +F ++G L DP + GW++++ D
Sbjct: 719 PTTRTFVKVYKSGS-VGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDR 777
Query: 735 ENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
ENDV+++GDDPW F N V I I + E+V KM
Sbjct: 778 ENDVLLLGDDPWESFVNSVWYIKILSPEDVHKM 810
>gi|414584845|tpg|DAA35416.1| TPA: hypothetical protein ZEAMMB73_535909 [Zea mays]
Length = 786
Score = 350 bits (898), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 177/351 (50%), Positives = 237/351 (67%), Gaps = 13/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL LP G VVYFPQGH EQVA+S+ +PN+ +L PQ+ C++ DV
Sbjct: 29 ELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLPPQLICQLHDV 88
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L ++ D + E G S K + FCKTLT
Sbjct: 89 TMHADVETDEVYAQMTLQP--------LNPQEQNDAYLPAEMGIMS--KQPTNYFCKTLT 138
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+A+D+H VEW+FRHI+RGQP+RHLL
Sbjct: 139 ASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDVEWKFRHIFRGQPKRHLL 198
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+VLF+ + +L LGIR + +P+ +P S+LS + + +L+
Sbjct: 199 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRHATRPQTVMPSSVLSSDSMHIGLLAA 258
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F +FY+PRA+ +FVIP KY+K + + I +G RF+M FE ++S RR
Sbjct: 259 AAHAAATNSRFTIFYNPRASPTEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRY 318
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +T ++D DP RWP+S WR + V WDE + +VS WEI+ + P
Sbjct: 319 MGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFP 369
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 51/72 (70%), Gaps = 2/72 (2%)
Query: 676 PGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDS 734
P R+ KV+K GS VGR++D+ R + Y +L EL +F ++G L DP + GW++++ D
Sbjct: 715 PTTRTFVKVYKSGS-VGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDR 773
Query: 735 ENDVMVVGDDPW 746
ENDV+++GDDPW
Sbjct: 774 ENDVLLLGDDPW 785
>gi|359359225|gb|AEV41129.1| putative auxin response factor [Oryza officinalis]
Length = 819
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 177/352 (50%), Positives = 240/352 (68%), Gaps = 15/352 (4%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIE--VPNF-DLQPQIFCKVVD 116
ELWHACAGPL LP G VVYFPQGH EQVA+S+ +E +PN+ +L Q+ C++ D
Sbjct: 30 ELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTN-KEVEGHIPNYPNLPAQLICQLHD 88
Query: 117 VQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTL 176
V + A+ E DEVY Q+ L P L ++ D + E G S K + FCKTL
Sbjct: 89 VTMHADVETDEVYAQMTLQP--------LNPQEQNDAYLPAEMGIMS--KQPTNYFCKTL 138
Query: 177 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHL 236
TASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+A+D+H +EW+FRHI+RGQP+RHL
Sbjct: 139 TASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHL 198
Query: 237 LTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLS 296
LTTGWS+FVS K LV+GD+VLF+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 199 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLA 258
Query: 297 VVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERR 355
A+A +T S F +FY+PRA+ ++FVIP KY+K + + I +G RF+M FE ++S RR
Sbjct: 259 AAAHAAATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRR 318
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +T ++D DP RWP+S WR + V WDE + +VS WEI+ + P
Sbjct: 319 YMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFP 370
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Query: 676 PGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDS 734
P R+ KV+K GS VGR++D+ R + Y +L EL +F ++G L DP + GW++++ D
Sbjct: 717 PTTRTFVKVYKSGS-VGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDR 775
Query: 735 ENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
ENDV+++GDDPW F N V I I + E+V KM
Sbjct: 776 ENDVLLLGDDPWESFVNSVWYIKILSPEDVHKM 808
>gi|359359078|gb|AEV40985.1| putative auxin response factor [Oryza punctata]
Length = 818
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 177/352 (50%), Positives = 240/352 (68%), Gaps = 15/352 (4%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIE--VPNF-DLQPQIFCKVVD 116
ELWHACAGPL LP G VVYFPQGH EQVA+S+ +E +PN+ +L Q+ C++ D
Sbjct: 30 ELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTN-KEVEGHIPNYPNLPAQLICQLHD 88
Query: 117 VQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTL 176
V + A+ E DEVY Q+ L P L ++ D + E G S K + FCKTL
Sbjct: 89 VTMHADVETDEVYAQMTLQP--------LNPQEQNDAYLPAEMGIMS--KQPTNYFCKTL 138
Query: 177 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHL 236
TASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+A+D+H +EW+FRHI+RGQP+RHL
Sbjct: 139 TASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHL 198
Query: 237 LTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLS 296
LTTGWS+FVS K LV+GD+VLF+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 199 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLA 258
Query: 297 VVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERR 355
A+A +T S F +FY+PRA+ ++FVIP KY+K + + I +G RF+M FE ++S RR
Sbjct: 259 AAAHAAATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRR 318
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +T ++D DP RWP+S WR + V WDE + +VS WEI+ + P
Sbjct: 319 YMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFP 370
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Query: 676 PGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDS 734
P R+ KV+K GS VGR++D+ R + Y +L EL +F ++G L DP + GW++++ D
Sbjct: 716 PTTRTFVKVYKSGS-VGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDR 774
Query: 735 ENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
ENDV+++GDDPW F N V I I + E+V KM
Sbjct: 775 ENDVLLLGDDPWESFVNSVWYIKILSPEDVHKM 807
>gi|414584844|tpg|DAA35415.1| TPA: hypothetical protein ZEAMMB73_535909 [Zea mays]
Length = 817
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 177/351 (50%), Positives = 237/351 (67%), Gaps = 13/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL LP G VVYFPQGH EQVA+S+ +PN+ +L PQ+ C++ DV
Sbjct: 29 ELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLPPQLICQLHDV 88
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L ++ D + E G S K + FCKTLT
Sbjct: 89 TMHADVETDEVYAQMTLQP--------LNPQEQNDAYLPAEMGIMS--KQPTNYFCKTLT 138
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+A+D+H VEW+FRHI+RGQP+RHLL
Sbjct: 139 ASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDVEWKFRHIFRGQPKRHLL 198
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+VLF+ + +L LGIR + +P+ +P S+LS + + +L+
Sbjct: 199 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRHATRPQTVMPSSVLSSDSMHIGLLAA 258
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F +FY+PRA+ +FVIP KY+K + + I +G RF+M FE ++S RR
Sbjct: 259 AAHAAATNSRFTIFYNPRASPTEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRY 318
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +T ++D DP RWP+S WR + V WDE + +VS WEI+ + P
Sbjct: 319 MGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFP 369
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Query: 676 PGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDS 734
P R+ KV+K GS VGR++D+ R + Y +L EL +F ++G L DP + GW++++ D
Sbjct: 715 PTTRTFVKVYKSGS-VGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDR 773
Query: 735 ENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
ENDV+++GDDPW F N V I I + E+V KM
Sbjct: 774 ENDVLLLGDDPWESFVNSVWYIKILSPEDVHKM 806
>gi|320117915|gb|ADW11246.1| putative auxin response factor [Gossypium hirsutum]
Length = 672
Score = 350 bits (897), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 179/367 (48%), Positives = 242/367 (65%), Gaps = 13/367 (3%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKVV 115
+Y ELWHACAGPL +LP+ G V YFPQGH+EQ+ AS ++P+FDL +I CKV
Sbjct: 19 LYRELWHACAGPLVTLPRVGERVYYFPQGHMEQLEASMHQGLEHQMPSFDLPSKILCKVA 78
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKT 175
VQ A + DEVY Q+ L+P E Q E + D+ + P + H FCKT
Sbjct: 79 SVQRKAEPDTDEVYAQITLVP---------EVDQSEVMSPDDPL--QEPERCIVHSFCKT 127
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
LTASDTSTHGGFSV RR A+DC PPLD QQ P QEL+A DLHG EW FRHI RGQPRRH
Sbjct: 128 LTASDTSTHGGFSVLRRHADDCLPPLDMTQQPPWQELIATDLHGNEWHFRHIRRGQPRRH 187
Query: 236 LLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVL 295
LLTTGWS+FVS K LV+GDA++FLRG +G+LR+G+RR ++ + +P S++S + VL
Sbjct: 188 LLTTGWSVFVSSKKLVAGDALIFLRGANGDLRVGVRRLMRQQANMPSSVISSHSIILGVL 247
Query: 296 SVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERR 355
+ + A+ST+SMF +FY PR + ++F++ KY++ + + +G RFKMRFE ++ PERR
Sbjct: 248 ATASYALSTRSMFSIFYKPRTSLSEFIVSVNKYLEARSHKLSVGMRFKMRFEGEEVPERR 307
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSI-QSS 414
+G + G+ W +S+WR L V+WDE ++VSPWE++ V+ SI Q +
Sbjct: 308 FSGTIVGVEADKSSGWADSEWRSLKVQWDEPSSIIRPDRVSPWELEPLVATSNSSISQPA 367
Query: 415 PRMKKLR 421
R K+ R
Sbjct: 368 QRNKRAR 374
Score = 119 bits (299), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/129 (48%), Positives = 85/129 (65%), Gaps = 6/129 (4%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYT 732
SQS RSCTKVH QG VGRA+DL R + Y DLL +LE++F+++G L K W+++YT
Sbjct: 540 SQSKQIRSCTKVHMQGMAVGRAVDLTRFDCYEDLLKKLEYMFDIKGQLCGSTKNWQVVYT 599
Query: 733 DSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGTT-----DDTQSCLDQAPVIME 787
D E+D+M+VGDDPW+EFC+ V KI IYT EEV K++ DD S L +A V
Sbjct: 600 DDEDDMMMVGDDPWNEFCSMVRKI-IYTSEEVRKLSPKIKAPVNDDDDDSKLTKAGVDTV 658
Query: 788 VSVSKSSSV 796
++ SS+
Sbjct: 659 INPEDRSSI 667
>gi|158513349|sp|A3B9A0.1|ARFP_ORYSJ RecName: Full=Auxin response factor 16
gi|125596359|gb|EAZ36139.1| hypothetical protein OsJ_20449 [Oryza sativa Japonica Group]
Length = 1055
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 178/347 (51%), Positives = 235/347 (67%), Gaps = 11/347 (3%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNF-DLQPQIFCKV 114
+I ELWHACAGPL SLP G++VVYFPQGH EQVA+S +P + L ++ CK+
Sbjct: 20 AINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELDNIPGYPSLPSKLICKL 79
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
+ + L A+ E DEVY Q+ L P + + +A +LG+ + K FCK
Sbjct: 80 LSLTLHADSETDEVYAQMTLQP---VNKYDRDAMLASELGLKQ-------NKQPAEFFCK 129
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLTASDTSTHGGFSVPRRAAE FPPLD+ Q P+QEL+AKDLH + W+FRHIYRGQP+R
Sbjct: 130 TLTASDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKR 189
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS+FVS K L++GD+VLF+R + +L LGIRR+ +P+ L S+LS + + +
Sbjct: 190 HLLTTGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRATRPQPALSSSVLSSDSMHIGI 249
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
L+ A+A + S F +FY+PRA+ ++FVIP KY K + + +G RF+M FE +DS R
Sbjct: 250 LAAAAHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVR 309
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
R G +TGI DLDP RW NS WR L V WDE S+ + +VS WEI+
Sbjct: 310 RYMGTITGIGDLDPVRWKNSHWRNLQVGWDESTASERRTRVSIWEIE 356
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 72/113 (63%), Gaps = 7/113 (6%)
Query: 672 SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRIL 730
++Q+ R+ TKV K+GS VGR+ID+ R Y++L +L +F ++G L DP + W+++
Sbjct: 933 NNQTQRMRTFTKVQKRGS-VGRSIDITRYRDYDELRHDLACMFGIQGQLEDPYRMDWKLV 991
Query: 731 YTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI-----GTTDDTQSC 778
Y D END+++VGDDPW EF V I I + EV++M++ G TQ+C
Sbjct: 992 YVDHENDILLVGDDPWEEFVGCVKSIKILSAAEVQQMSLDGDLGGVPPQTQAC 1044
>gi|158512935|sp|A2YAA5.1|ARFP_ORYSI RecName: Full=Auxin response factor 16
gi|125554410|gb|EAZ00016.1| hypothetical protein OsI_22015 [Oryza sativa Indica Group]
Length = 1055
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 178/347 (51%), Positives = 235/347 (67%), Gaps = 11/347 (3%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNF-DLQPQIFCKV 114
+I ELWHACAGPL SLP G++VVYFPQGH EQVA+S +P + L ++ CK+
Sbjct: 20 AINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELDNIPGYPSLPSKLICKL 79
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
+ + L A+ E DEVY Q+ L P + + +A +LG+ + K FCK
Sbjct: 80 LSLTLHADSETDEVYVQMTLQP---VNKYDRDAMLASELGLKQ-------NKQPAEFFCK 129
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLTASDTSTHGGFSVPRRAAE FPPLD+ Q P+QEL+AKDLH + W+FRHIYRGQP+R
Sbjct: 130 TLTASDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKR 189
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS+FVS K L++GD+VLF+R + +L LGIRR+ +P+ L S+LS + + +
Sbjct: 190 HLLTTGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRATRPQPALSSSVLSSDSMHIGI 249
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
L+ A+A + S F +FY+PRA+ ++FVIP KY K + + +G RF+M FE +DS R
Sbjct: 250 LAAAAHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVR 309
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
R G +TGI DLDP RW NS WR L V WDE S+ + +VS WEI+
Sbjct: 310 RYMGTITGIGDLDPVRWKNSHWRNLQVGWDESTASERRTRVSIWEIE 356
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 72/113 (63%), Gaps = 7/113 (6%)
Query: 672 SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRIL 730
++Q+ R+ TKV K+GS VGR+ID+ R Y++L +L +F ++G L DP + W+++
Sbjct: 933 NNQTQRMRTFTKVQKRGS-VGRSIDITRYRDYDELRHDLACMFGIQGQLEDPYRMDWKLV 991
Query: 731 YTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI-----GTTDDTQSC 778
Y D END+++VGDDPW EF V I I + EV++M++ G TQ+C
Sbjct: 992 YVDHENDILLVGDDPWEEFVGCVKSIKILSAAEVQQMSLDGDLGGVPPQTQAC 1044
>gi|122195722|sp|Q258Y5.1|ARFL_ORYSI RecName: Full=Auxin response factor 12; AltName: Full=OsARF8
gi|90265252|emb|CAH67705.1| H0624F09.13 [Oryza sativa Indica Group]
Length = 816
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 177/352 (50%), Positives = 240/352 (68%), Gaps = 15/352 (4%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIE--VPNF-DLQPQIFCKVVD 116
ELWHACAGPL LP G VVYFPQGH EQVA+S+ +E +PN+ +L Q+ C++ D
Sbjct: 31 ELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTN-KEVEGHIPNYPNLPAQLICQLHD 89
Query: 117 VQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTL 176
V + A+ E DEVY Q+ L P L ++ D + E G S K + FCKTL
Sbjct: 90 VTMHADVETDEVYAQMTLQP--------LNPQEQNDAYLPAEMGIMS--KQPTNYFCKTL 139
Query: 177 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHL 236
TASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+A+D+H +EW+FRHI+RGQP+RHL
Sbjct: 140 TASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHL 199
Query: 237 LTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLS 296
LTTGWS+FVS K LV+GD+VLF+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 200 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLA 259
Query: 297 VVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERR 355
A+A +T S F +FY+PRA+ ++FVIP KY+K + + I +G RF+M FE ++S RR
Sbjct: 260 AAAHAAATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRR 319
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +T ++D DP RWP+S WR + V WDE + +VS WEI+ + P
Sbjct: 320 YMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFP 371
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Query: 676 PGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDS 734
P R+ KV+K GS VGR++D+ R + Y +L EL +F ++G L DP + GW++++ D
Sbjct: 714 PATRTFVKVYKSGS-VGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDR 772
Query: 735 ENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
ENDV+++GDDPW F N V I I + E+V KM
Sbjct: 773 ENDVLLLGDDPWESFVNSVWYIKILSPEDVHKM 805
>gi|115461244|ref|NP_001054222.1| Os04g0671900 [Oryza sativa Japonica Group]
gi|122228290|sp|Q0J951.1|ARFL_ORYSJ RecName: Full=Auxin response factor 12; AltName: Full=OsARF8
gi|113565793|dbj|BAF16136.1| Os04g0671900 [Oryza sativa Japonica Group]
gi|222629754|gb|EEE61886.1| hypothetical protein OsJ_16583 [Oryza sativa Japonica Group]
Length = 818
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 177/352 (50%), Positives = 240/352 (68%), Gaps = 15/352 (4%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIE--VPNF-DLQPQIFCKVVD 116
ELWHACAGPL LP G VVYFPQGH EQVA+S+ +E +PN+ +L Q+ C++ D
Sbjct: 31 ELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTN-KEVEGHIPNYPNLPAQLICQLHD 89
Query: 117 VQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTL 176
V + A+ E DEVY Q+ L P L ++ D + E G S K + FCKTL
Sbjct: 90 VTMHADVETDEVYAQMTLQP--------LNPQEQNDAYLPAEMGIMS--KQPTNYFCKTL 139
Query: 177 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHL 236
TASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+A+D+H +EW+FRHI+RGQP+RHL
Sbjct: 140 TASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHL 199
Query: 237 LTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLS 296
LTTGWS+FVS K LV+GD+VLF+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 200 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLA 259
Query: 297 VVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERR 355
A+A +T S F +FY+PRA+ ++FVIP KY+K + + I +G RF+M FE ++S RR
Sbjct: 260 AAAHAAATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRR 319
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +T ++D DP RWP+S WR + V WDE + +VS WEI+ + P
Sbjct: 320 YMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFP 371
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Query: 676 PGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDS 734
P R+ KV+K GS VGR++D+ R + Y +L EL +F ++G L DP + GW++++ D
Sbjct: 716 PATRTFVKVYKSGS-VGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDR 774
Query: 735 ENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
ENDV+++GDDPW F N V I I + E+V KM
Sbjct: 775 ENDVLLLGDDPWESFVNSVWYIKILSPEDVHKM 807
>gi|295844328|gb|ADG43161.1| auxin response factor 27 [Zea mays]
gi|413952805|gb|AFW85454.1| hypothetical protein ZEAMMB73_050536 [Zea mays]
Length = 1053
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 180/346 (52%), Positives = 238/346 (68%), Gaps = 11/346 (3%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNF-DLQPQIFCKVV 115
I ELWHACAGPL SLP G++VVYFPQGH EQVA+S VP++ L ++ CK++
Sbjct: 21 INSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELDTVPSYPSLPSKLICKLL 80
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKT 175
+ L A+ E DEVY Q+ L P + + +A +LG+ + + PT+ FCKT
Sbjct: 81 SLTLHADSETDEVYAQMMLQP---VNKYDRDAMLASELGLKQ---NKQPTE----FFCKT 130
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
LTASDTSTHGGFSVPRRAAE FPPLD+ Q P+QEL+AKDLH + W+FRHIYRGQP+RH
Sbjct: 131 LTASDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRH 190
Query: 236 LLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVL 295
LLTTGWS+FVS K L++GD+VLF+R + +L LGIRR+ +P+ L S+LS + + +L
Sbjct: 191 LLTTGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRASRPQPALSSSVLSSDSMHIGIL 250
Query: 296 SVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERR 355
+ A+A + S F +FY+PRA+ ++FVIP KY K + + +G RF+M FE +DS RR
Sbjct: 251 AAAAHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVRR 310
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
G +TGI DLDP RW NS WR L V WDE S+ + +VS WEI+
Sbjct: 311 YMGTITGIGDLDPLRWKNSHWRNLQVGWDESTASERRTRVSIWEIE 356
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/112 (43%), Positives = 73/112 (65%), Gaps = 6/112 (5%)
Query: 672 SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRIL 730
+SQ+ R+ TKV K+GS VGR+ID+ R GY DL +L +F ++G L DP + W+++
Sbjct: 932 NSQTQRMRTFTKVQKRGS-VGRSIDITRYRGYEDLRHDLACMFGIQGQLEDPYRTDWKLV 990
Query: 731 YTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT----IGTTDDTQSC 778
Y D END+++VGDDPW EF + V I I + EV++M+ +G TQ+C
Sbjct: 991 YVDHENDILLVGDDPWEEFVSCVKSIKILSSVEVQQMSLDGDLGCIPQTQAC 1042
>gi|224062573|ref|XP_002300854.1| predicted protein [Populus trichocarpa]
gi|222842580|gb|EEE80127.1| predicted protein [Populus trichocarpa]
Length = 372
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 179/351 (50%), Positives = 239/351 (68%), Gaps = 12/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VYFPQGH EQVA+S+ +PN+ L Q+ C++ +V
Sbjct: 8 ELWHACAGPLVSLPHVGSRAVYFPQGHSEQVAASTNKEVDAHIPNYPSLPAQLICQLHNV 67
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L+ E K+ L E G +K + FCKTLT
Sbjct: 68 TMHADVETDEVYAQMTLQP------LSPEDKKDAYLLPAELGTA---SKQPSNYFCKTLT 118
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ Q P+QEL+A+DLH EW+FRHI+RGQP+RHLL
Sbjct: 119 ASDTSTHGGFSVPRRAAEKVFPPLDFSQTPPAQELIARDLHDNEWKFRHIFRGQPKRHLL 178
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+VLF+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 179 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAA 238
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F +FY+PR + ++FVIP KY+K + + + +G RF+M FE ++S RR
Sbjct: 239 AAHAAATNSRFTIFYNPRTSPSEFVIPLVKYIKAVYHTRVSVGMRFRMLFETEESSVRRY 298
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI+DLDP RWPNS WR + V WDE + Q +VS WEI+ + P
Sbjct: 299 MGTITGISDLDPARWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFP 349
>gi|326517318|dbj|BAK00026.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 891
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 177/363 (48%), Positives = 245/363 (67%), Gaps = 13/363 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ V+YFPQGH EQVA+S+ ++PN+ +L PQ+ C++ +V
Sbjct: 27 ELWHACAGPLVSLPAVGSRVIYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLICQLHNV 86
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L+ E ++ L ++ + PT + FCKTLT
Sbjct: 87 TMHADAETDEVYAQMTLQP------LSPEEQKEPFLPIELGAASKQPT----NYFCKTLT 136
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRR+AE FPPLD+ Q P QEL+AKDLH EW+FRHI+RGQP+RHLL
Sbjct: 137 ASDTSTHGGFSVPRRSAEKVFPPLDFSLQPPCQELIAKDLHDNEWKFRHIFRGQPKRHLL 196
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+V+F+ + +L LGIR + +P+ +P S+LS + + +L+
Sbjct: 197 TTGWSVFVSAKRLVAGDSVIFIWNDNNQLLLGIRHANRPQTVMPSSVLSSDSMHIGLLAA 256
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F +FY+PRA+ ++F+IP KYVK + + + +G RF+M FE ++S RR
Sbjct: 257 AAHAAATNSRFTIFYNPRASPSEFIIPLAKYVKSVYHTRVSVGMRFRMLFETEESSVRRY 316
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPR 416
G +T I+DLD RWPNS WR + V WDE + Q +VS WEI+ + P R
Sbjct: 317 MGTITTISDLDSARWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPLTTFPMYPTAFPLR 376
Query: 417 MKK 419
+K+
Sbjct: 377 LKR 379
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 63/90 (70%), Gaps = 2/90 (2%)
Query: 682 TKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMV 740
KV K GS GR++D+ + + Y +L SELEHLF +EG L DP + GW++++ D END+++
Sbjct: 760 VKVCKSGS-PGRSLDITKFSSYYELRSELEHLFGLEGQLEDPVRSGWQLVFVDRENDILL 818
Query: 741 VGDDPWHEFCNEVSKIHIYTQEEVEKMTIG 770
VGDDPW EF N V I I + +EV++M G
Sbjct: 819 VGDDPWQEFVNSVGCIKILSPQEVQRMVRG 848
>gi|19352049|dbj|BAB85918.1| auxin response factor 8 [Oryza sativa]
Length = 795
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 177/352 (50%), Positives = 240/352 (68%), Gaps = 15/352 (4%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIE--VPNF-DLQPQIFCKVVD 116
ELWHACAGPL LP G VVYFPQGH EQVA+S+ +E +PN+ +L Q+ C++ D
Sbjct: 8 ELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTN-KEVEGHIPNYPNLPAQLICQLHD 66
Query: 117 VQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTL 176
V + A+ E DEVY Q+ L P L ++ D + E G S K + FCKTL
Sbjct: 67 VTMHADVETDEVYAQMTLQP--------LNPQEQNDAYLPAEMGIMS--KQPTNYFCKTL 116
Query: 177 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHL 236
TASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+A+D+H +EW+FRHI+RGQP+RHL
Sbjct: 117 TASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFRGQPKRHL 176
Query: 237 LTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLS 296
LTTGWS+FVS K LV+GD+VLF+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 177 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLA 236
Query: 297 VVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERR 355
A+A +T S F +FY+PRA+ ++FVIP KY+K + + I +G RF+M FE ++S RR
Sbjct: 237 AAAHAAATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRR 296
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +T ++D DP RWP+S WR + V WDE + +VS WEI+ + P
Sbjct: 297 YMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFP 348
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Query: 676 PGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDS 734
P R+ KV+K GS VGR++D+ R + Y +L EL +F ++G L DP + GW++++ D
Sbjct: 693 PATRTFVKVYKSGS-VGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDR 751
Query: 735 ENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
ENDV+++GDDPW F N V I I + E+V KM
Sbjct: 752 ENDVLLLGDDPWESFVNSVWYIKILSPEDVHKM 784
>gi|302398561|gb|ADL36575.1| ARF domain class transcription factor [Malus x domestica]
Length = 695
Score = 349 bits (896), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 177/366 (48%), Positives = 240/366 (65%), Gaps = 16/366 (4%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNFDLQPQIFCKVV 115
+Y ELW CAGPL +P+ G V YFPQGH+EQ+ SS+ ++P F+L +I C VV
Sbjct: 22 LYTELWKLCAGPLVDVPRPGEKVYYFPQGHMEQLESSTNQELNQQIPLFNLPSKILCSVV 81
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKT 175
++LLA +E DEVY Q+ L P EA Q E D +P K+T H FCK
Sbjct: 82 HIRLLAEQETDEVYAQITLHP---------EADQCEPSSPDP-CKPEAP-KATVHWFCKI 130
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
LTASDTSTHGGFSV R+ A +C PPLD Q P+QEL+AKDLHG EW+F+HI+RGQPRRH
Sbjct: 131 LTASDTSTHGGFSVLRKHATECLPPLDMNQATPTQELIAKDLHGYEWKFKHIFRGQPRRH 190
Query: 236 LLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVL 295
LLTTGWS FV+ K LV+GDA +FLRG +GELR G+RR + ++ +P S++S Q+ + VL
Sbjct: 191 LLTTGWSTFVTSKRLVAGDAFVFLRGDNGELRAGVRRLARQQSQIPSSVISSQSMHLGVL 250
Query: 296 SVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERR 355
+ ++A+ TK++F V+ PR + F+I KY++ +GTRF+MRFE D+SPERR
Sbjct: 251 ATASHALMTKTLFVVYSKPRTSQ--FIIGLSKYLEATKTKFSLGTRFRMRFEGDESPERR 308
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSP 415
G + + DL P +W SKWR L V+WDE ++VSPW+I+ V+ P ++ + P
Sbjct: 309 FTGTIVEVGDLSP-QWSESKWRSLKVQWDEHAAVQRPDRVSPWDIEPFVASAPSNL-AQP 366
Query: 416 RMKKLR 421
+K R
Sbjct: 367 MVKSKR 372
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 63/89 (70%), Gaps = 1/89 (1%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDV 738
R+ TKV QG VGRA+DL L GY+ L+ ELE +F ++G LR P W +++TD END+
Sbjct: 580 RTRTKVQMQGVAVGRAVDLTALKGYDHLIDELEKMFEIKGELR-PKNKWAVVFTDDENDM 638
Query: 739 MVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
M++GDD W +FC V KI IY+ +EV+KM
Sbjct: 639 MLMGDDQWPDFCKLVKKIFIYSSDEVQKM 667
>gi|63095201|gb|AAY32331.1| ARF1 [Phyllostachys praecox]
Length = 362
Score = 349 bits (895), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 173/350 (49%), Positives = 234/350 (66%), Gaps = 16/350 (4%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIE--VPNFDLQPQIFCKV 114
++ ELW ACAGPL ++P G V YFPQGH+EQV +S+ + P ++L +I CKV
Sbjct: 22 LFVELWKACAGPLAAVPAVGERVFYFPQGHIEQVEASTNQVAEQQGTPLYNLPWKIPCKV 81
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEE-----GGGRSPTKSTP 169
++V+L A ++ DEVY Q+ LLP E KQ E++ +EE ++
Sbjct: 82 MNVELKAEQDTDEVYAQLTLLP---------EKKQDENVSKEEEEVVPDAPPAVAERTRV 132
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
H FCKTLTASDTSTHGGFSV RR A++C PPLD Q P+QELVAKDLHGVEW FRHI+R
Sbjct: 133 HSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPTQELVAKDLHGVEWPFRHIFR 192
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQN 289
GQPRRHLL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++ R +P S++S +
Sbjct: 193 GQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQRANIPSSVISSHS 252
Query: 290 SYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMD 349
+ VL+ + +T +MF V+Y PR + A+FV+P + + + IG RFKMRFE +
Sbjct: 253 MHLGVLATAWHVANTGTMFTVYYKPRTSPAEFVVPRDWFDESLKRNHSIGMRFKMRFEGE 312
Query: 350 DSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWE 399
++ E+R G + GI D DP W +SKWR L VRWDE E+VSPW+
Sbjct: 313 EAAEQRFTGTIVGIGDSDPSGWVDSKWRSLKVRWDEASSVPRPERVSPWQ 362
>gi|379323218|gb|AFD01308.1| auxin response factor 9 [Brassica rapa subsp. pekinensis]
Length = 629
Score = 349 bits (895), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 178/377 (47%), Positives = 240/377 (63%), Gaps = 34/377 (9%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSS-----AFPPIEVPNFDLQPQIF 111
+Y ELW CAGP+ +P+ V YFPQGH+EQ+ +S+ A P + P FDL P+I
Sbjct: 7 MYGELWKLCAGPVVDVPQAAERVFYFPQGHMEQLEASTQQDLNAVKPTK-PLFDLPPKIL 65
Query: 112 CKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTP-- 169
C+V+DV+L A K+ DEVY Q+ L+P EG VDE SP S P
Sbjct: 66 CRVMDVRLQAEKDTDEVYAQIMLMP----EGT-----------VDE---PMSPDPSPPES 107
Query: 170 -----HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRF 224
H F K LTASDTSTHGGFSV R+ A +C PPLD QQ P+QELVA+D+HG +W+F
Sbjct: 108 QRPKVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKF 167
Query: 225 RHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSI 284
+HI+RGQPRRHLLTTGWS FV+ K LV+GD +FLRG++GELR+G+RR+ + + +P S+
Sbjct: 168 KHIFRGQPRRHLLTTGWSTFVTAKRLVAGDTFVFLRGENGELRVGVRRANRQQTNMPSSV 227
Query: 285 LSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKM 344
+S + + VL+ +A T+SMF V+Y PR + F+I KY++ + N +G RFKM
Sbjct: 228 ISSHSMHLGVLATACHATQTRSMFTVYYKPRTSQ--FIISLNKYLEAMSNKFSVGIRFKM 285
Query: 345 RFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSV 404
RFE +DSPERR +G V G+ D + W +S WRCL V WDE ++VSPWEI+ V
Sbjct: 286 RFEGEDSPERRFSGTVVGVKDCSTH-WKDSNWRCLEVHWDEPASISRPDKVSPWEIEPFV 344
Query: 405 SLPPLSIQSSPRMKKLR 421
+ + P+ K+ R
Sbjct: 345 TSENVPHSVMPKNKRPR 361
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/92 (56%), Positives = 69/92 (75%), Gaps = 1/92 (1%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDV 738
RS TKV QG VGRA+DL LNGY++L+ +LE LF++EG L+ W I++TD E D+
Sbjct: 513 RSRTKVQMQGVPVGRAVDLTVLNGYSELIDDLEKLFDIEGELKS-RNQWEIVFTDDEGDM 571
Query: 739 MVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIG 770
M+VGDDPW EFCN V +I I+++EEV+KMT G
Sbjct: 572 MLVGDDPWPEFCNMVKRIFIWSKEEVKKMTPG 603
>gi|350540650|ref|NP_001234540.1| auxin response factor 6-1 [Solanum lycopersicum]
gi|300252249|gb|ADJ96372.1| auxin response factor 6-1 [Solanum lycopersicum]
Length = 524
Score = 348 bits (894), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 183/363 (50%), Positives = 246/363 (67%), Gaps = 12/363 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH QVA+S+ +PN+ L PQ+ C++ ++
Sbjct: 24 ELWHACAGPLVSLPPVGSRVVYFPQGHSVQVAASTNKEVDAHIPNYPGLPPQLICQLHNL 83
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L ++ +D+ + G P+K + FCKTLT
Sbjct: 84 TMHADVETDEVYAQMTLQP--------LSPQEQKDVCLLPAELG-IPSKLPTNYFCKTLT 134
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLDY QQ P QEL+AKDLHG EW+ RHI+RGQP+RHLL
Sbjct: 135 ASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPCQELIAKDLHGNEWKLRHIFRGQPKRHLL 194
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GDAV+F+ ++ +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 195 TTGWSVFVSAKRLVAGDAVIFIWNENNQLLLGIRRANRPQTLMPFSVLSSDSMHIGLLAA 254
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T + F +FY+PRA+ ++FVIP KY K + + I +G RF+M FE ++S RR
Sbjct: 255 AAHATATNTRFTIFYNPRASPSEFVIPLAKYAKAVYHTRISVGMRFRMLFETEESSVRRY 314
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPR 416
G +TGI+DLDP WPNS WR + V WDE + Q +VS WEI+ + P S R
Sbjct: 315 MGTITGISDLDPVCWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFSLR 374
Query: 417 MKK 419
+K+
Sbjct: 375 LKR 377
>gi|357167643|ref|XP_003581263.1| PREDICTED: auxin response factor 9-like [Brachypodium distachyon]
Length = 693
Score = 348 bits (893), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 178/385 (46%), Positives = 247/385 (64%), Gaps = 19/385 (4%)
Query: 54 SSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFC 112
S +++ ELWHACAGPL ++P++G V YFPQGH+EQ+ AS++ +P F+L +I C
Sbjct: 68 SDALFHELWHACAGPLITVPRQGERVYYFPQGHIEQLEASTNQQLDQYLPMFNLPSKILC 127
Query: 113 KVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMF 172
VV+V+L ++DEVY Q+ L PQ E L G + + T H F
Sbjct: 128 SVVNVELRTEADSDEVYAQIMLQPQDEQSELT------------SAGPPQELERGTIHSF 175
Query: 173 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQP 232
CKTLTASDTSTHGGFSV RR AE+C P LD Q P QELVAKDLHG EW FRHI+RGQP
Sbjct: 176 CKTLTASDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGAEWHFRHIFRGQP 235
Query: 233 RRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYP 292
RRHLLTTGWS+FVS K LV+GDA +FLRG +GELR+G+RR ++ N +P S++S + +
Sbjct: 236 RRHLLTTGWSVFVSSKRLVAGDAFIFLRGGNGELRVGVRRHMRQVNNMPSSVISSHSMHL 295
Query: 293 NVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSP 352
VL+ ++A+ST ++F VFY PR + ++FV+ KY++ + +G RFKM+FE D++
Sbjct: 296 GVLATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKKQNMSVGMRFKMKFEGDEAL 355
Query: 353 ERRCNGVVTGITD---LDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPL 409
ERR +G + G+ + +W +S W+ L V+WDE ++VS WE++ S P
Sbjct: 356 ERRFSGTIVGMGSTPTMPSSQWADSDWKSLKVQWDEPSSILRPDRVSLWELEPLDSANPQ 415
Query: 410 SIQSSPRMKKLRTGLQAPP--PDYP 432
+ + R K+ R L +P PD P
Sbjct: 416 TPEPPLRNKRAR-ALASPSVVPDLP 439
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 71/103 (68%)
Query: 665 TSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPA 724
+SE +QS RSCTKV +G VGRA+DL RL+GY DL +LE +F++ G L
Sbjct: 569 SSERALLETQSRQVRSCTKVIMKGMAVGRAVDLARLDGYGDLHRKLEEMFDIHGELCSTL 628
Query: 725 KGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
K W+++Y D E+D+M+VGDDPW EFC V +I+IY+ EE +++
Sbjct: 629 KRWQVVYADDEDDMMLVGDDPWDEFCGMVKRIYIYSYEEAKQL 671
>gi|297844950|ref|XP_002890356.1| hypothetical protein ARALYDRAFT_472210 [Arabidopsis lyrata subsp.
lyrata]
gi|297336198|gb|EFH66615.1| hypothetical protein ARALYDRAFT_472210 [Arabidopsis lyrata subsp.
lyrata]
Length = 903
Score = 348 bits (892), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 181/353 (51%), Positives = 238/353 (67%), Gaps = 12/353 (3%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVA-SSSAFPPIEVPNF-DLQPQIFCKV 114
I ELWHACAGPL LP+ G++V YF QGH EQVA S+ +VPN+ +L Q+ C+V
Sbjct: 51 INSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQV 110
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
+V L A+K++DE+Y Q++L P + + D G+ GG + PT+ FCK
Sbjct: 111 HNVTLHADKDSDEIYAQMSLQPVHS----ERDVFPVPDFGM-LRGGSKHPTE----FFCK 161
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLTASDTSTHGGFSVPRRAAE FPPLDY Q P+QELV +DLH W FRHIYRGQP+R
Sbjct: 162 TLTASDTSTHGGFSVPRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPKR 221
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS+FV K L +GD+VLF+R + +L +G+RR+ + + LP S+LS + + V
Sbjct: 222 HLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGV 281
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIM-NPICIGTRFKMRFEMDDSPE 353
L+ A+A + ++ F +FY+PRA A+FVIP KY K I + + +G RF M FE +DS +
Sbjct: 282 LAAAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGK 341
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSL 406
RR G + GI+DLDP RWP SKWR L V WDE +D +VSPW+I+ SL
Sbjct: 342 RRYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIETPESL 394
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 63/95 (66%), Gaps = 2/95 (2%)
Query: 675 SPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDP-AKGWRILYTD 733
+P R+ TKV K GS VGR+ID+ Y +L S +E +F +EGLL P + GW+++Y D
Sbjct: 790 TPRVRTYTKVQKTGS-VGRSIDVTSFKDYKELKSAIECMFGLEGLLTQPQSSGWKLVYVD 848
Query: 734 SENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
E+DV++VGDDPW EF V I I + EV++M+
Sbjct: 849 YESDVLLVGDDPWEEFVGCVRCIRILSPTEVQQMS 883
>gi|226501648|ref|NP_001152338.1| LOC100285977 [Zea mays]
gi|195655287|gb|ACG47111.1| auxin response factor 1 [Zea mays]
Length = 676
Score = 348 bits (892), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 173/356 (48%), Positives = 238/356 (66%), Gaps = 16/356 (4%)
Query: 50 SSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQP 108
S S +++ ELWHACAGPL ++P++G +V YFPQGH+EQ+ AS+ +P F+L
Sbjct: 10 SGSAGDALFRELWHACAGPLVTVPRQGELVYYFPQGHMEQLEASTDQQLDQHLPLFNLPH 69
Query: 109 QIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKST 168
+I CKVV+V+L A ++DEVY Q+ L PQ E + + P +
Sbjct: 70 KILCKVVNVELRAETDSDEVYAQIMLQPQTE-----------QSEPTSPDPEPPEPERCN 118
Query: 169 PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIY 228
H FCKTLTASDTSTHG SV RR AE+C P LD Q P QELVAKDLHG EW FRHI+
Sbjct: 119 IHSFCKTLTASDTSTHG-LSVLRRHAEECLPQLDMTQNPPWQELVAKDLHGNEWHFRHIF 177
Query: 229 RGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQ 288
RGQPRRHLLTTGWS+FVS K LV+GDA +FLRG++GELR+G+RR ++ N +P S++S
Sbjct: 178 RGQPRRHLLTTGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSH 237
Query: 289 NSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEM 348
+ + VL+ ++A+ST ++F VFY PR + ++FV+ KY++ + + +G RFKMRFE
Sbjct: 238 SMHLGVLATASHAISTGTLFSVFYKPRTSRSEFVVSVNKYLEAKNHKMSVGMRFKMRFEG 297
Query: 349 DDSPERRCNGVVTGITDLDPYR---WPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
D+SPERR +G++ G+ + W NS+WR L V+WDE ++VSPWE++
Sbjct: 298 DESPERRFSGIIIGMGCMPANSTSPWANSEWRSLKVQWDEPSAILRPDRVSPWEVE 353
Score = 112 bits (281), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 49/96 (51%), Positives = 69/96 (71%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYT 732
++S RSCTKV QG VGRA+DL RL+GY+DL +LE +F++ G L W+++YT
Sbjct: 538 TESRQARSCTKVIMQGVAVGRAVDLTRLDGYDDLRRKLEEMFDIPGELSASLNKWKVIYT 597
Query: 733 DSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
D E+D+M+VGDDPW EFC V +I+IY+ EE + +T
Sbjct: 598 DDEDDMMLVGDDPWSEFCRMVKRIYIYSYEEAKSLT 633
>gi|357124927|ref|XP_003564148.1| PREDICTED: auxin response factor 16-like [Brachypodium distachyon]
Length = 1063
Score = 348 bits (892), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 177/347 (51%), Positives = 236/347 (68%), Gaps = 11/347 (3%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNF-DLQPQIFCKV 114
+I ELWHACAGPL ++P G++VVYFPQGH EQVA+S +PN+ L ++ CK+
Sbjct: 20 AINSELWHACAGPLVAMPPVGSLVVYFPQGHSEQVAASMNKEVDVIPNYPSLPSKLICKL 79
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
+ + L A+ E DEVY Q+ L P + + +A +LG+ + K FCK
Sbjct: 80 LSLTLHADSETDEVYAQMTLQP---VSKYDRDAMLASELGLKQ-------NKQPMEFFCK 129
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLTASDTSTHGGFSVPRRAAE FPPLD+ Q P+QEL+AKDLH + W+FRHI+RGQP+R
Sbjct: 130 TLTASDTSTHGGFSVPRRAAEKIFPPLDFAMQPPAQELMAKDLHDISWKFRHIFRGQPKR 189
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS+FVS K L++GD+VLF+R + +L LGIRRS +P+ L S+LS + + +
Sbjct: 190 HLLTTGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRSTRPQPALSSSVLSSDSMHIGI 249
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
L+ A+A + S F +FY+PRA+ ++FVIP KY K + + +G RF+M FE +DS R
Sbjct: 250 LAAAAHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVR 309
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
R G +TGI DLDP RW NS WR L V WDE S+ + +VS WEI+
Sbjct: 310 RYMGTITGIGDLDPVRWKNSHWRNLQVGWDESTASERRTRVSIWEIE 356
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 73/113 (64%), Gaps = 7/113 (6%)
Query: 672 SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRIL 730
++Q+ R+ TKV K+GS VGR+ID+ R Y++L +L +F ++G L DP + W+++
Sbjct: 940 NNQTQRMRTFTKVQKRGS-VGRSIDITRYRNYDELRHDLACMFGIQGQLEDPYRMDWKLV 998
Query: 731 YTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI-----GTTDDTQSC 778
Y D END+++VGDDPW EF + V I I + EV++M++ G TQ+C
Sbjct: 999 YVDHENDILLVGDDPWEEFVSCVKSIKILSSVEVQQMSLDGDLGGIPSQTQAC 1051
>gi|108864433|gb|ABG22497.1| Auxin response factor 2, putative, expressed [Oryza sativa Japonica
Group]
Length = 771
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 232/604 (38%), Positives = 322/604 (53%), Gaps = 64/604 (10%)
Query: 104 FDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRS 163
++L +I C+V++V+L A + DEVY Q+ LLP E+KQ ED G EE +
Sbjct: 4 YNLPWKILCEVMNVELKAEPDTDEVYAQLTLLP---------ESKQQEDNGSTEEEVPSA 54
Query: 164 PT----KSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHG 219
P + H FCKTLTASDTSTHGGFSV RR A++C PPLD +Q P+QELVAKDLHG
Sbjct: 55 PAAGHVRPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHG 114
Query: 220 VEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNG 279
VEWRFRHI+RGQPRRHLL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++ +
Sbjct: 115 VEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRAMRQQTN 174
Query: 280 LPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIG 339
+P S++S + + VL+ +AV+T +MF V+Y PR + A+FV+PY +Y++ + IG
Sbjct: 175 VPSSVISSHSMHLGVLATAWHAVNTGTMFTVYYKPRTSPAEFVVPYDRYMESLKQNYSIG 234
Query: 340 TRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWE 399
RFKMRFE +++PE+R G + G+ D DP WP SKWR L VRWDE E+VSPW+
Sbjct: 235 MRFKMRFEGEEAPEQRFTGTIVGMGDSDPAGWPESKWRSLKVRWDEASSIPRPERVSPWQ 294
Query: 400 IDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGG--VLDFEESVRSSKVLQGQE 457
I+ +VS PP++ PR K+LR A P D A+ V+ E + + Q QE
Sbjct: 295 IEPAVSPPPVNPLPVPRTKRLRPNATALPADSSAIAKEAATKVVVESEPNGTQRTFQTQE 354
Query: 458 NV------GFVSPLYGCD-TVNHPLGFEMR---APAHQSLALNGIRKDNINELVRALPTS 507
N G S L ++ P GF+ P L +G + + P S
Sbjct: 355 NATPKSGFGNSSELESAQKSIMRPSGFDREKNNTPIQWKLGSDG-------RMQMSKPES 407
Query: 508 YTGFVESNRFPKVLQ-GQEICPLRSLTGKVDLNLGTWGKPNF--GCNSMNMYQASKPNIY 564
Y+ + + PK +Q Q C SL ++ T G NF N+ Q S N++
Sbjct: 408 YSEMLSGFQPPKDVQIPQGFC---SLPEQI-----TAGHSNFWHTVNAQYQDQQSNHNMF 459
Query: 565 PPPSESLSNMFFPYGDMPKTVQHHTMPPYASNLQRE--NVKL-NSSSIQMPAIGAEIRKA 621
P S + P + Q+++M A L + N K N +P G E
Sbjct: 460 P----SSWSFMPPNTRLGLNKQNYSMIQEAGVLSQRPGNTKFGNGVYAALPGRGTEQYSG 515
Query: 622 NLLNEHKPVENI---------PTPTFKANMRSHKDGSFNGTAAGCKLFGFSLTSETPTPS 672
P ++ P P A+ K A CKLFG L S +
Sbjct: 516 GWFGHMMPNSHMDDTQPRLIKPKPLVVAHGDVQK-----AKGASCKLFGIHLDSPAKSEP 570
Query: 673 SQSP 676
+SP
Sbjct: 571 LKSP 574
Score = 125 bits (315), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 74/99 (74%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYT 732
SQ RSC KVHKQG +GR++DL + NGY +L++EL+ +F+ G L+ P K W ++YT
Sbjct: 637 SQGVSTRSCKKVHKQGIALGRSVDLTKFNGYEELIAELDDMFDFNGELKGPKKEWMVVYT 696
Query: 733 DSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGT 771
D+E D+M+VGDDPW EFC+ V KI IYT+EEV++M GT
Sbjct: 697 DNEGDMMLVGDDPWIEFCDMVHKIFIYTREEVQRMNPGT 735
>gi|449460205|ref|XP_004147836.1| PREDICTED: auxin response factor 5-like [Cucumis sativus]
gi|449476870|ref|XP_004154860.1| PREDICTED: auxin response factor 5-like [Cucumis sativus]
Length = 949
Score = 347 bits (891), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 201/451 (44%), Positives = 275/451 (60%), Gaps = 30/451 (6%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPI-EVPNF-DLQPQIFCK 113
+I ELWHACAGPL SLP G++V YFPQGH EQVA S+ ++PN+ +L Q+ C+
Sbjct: 42 AINSELWHACAGPLVSLPHVGSLVYYFPQGHSEQVAVSTKRTATSQIPNYPNLPSQLMCQ 101
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFC 173
V +V L A+K++DE+Y Q++L P +N E +D+ + + G R P+K FC
Sbjct: 102 VQNVTLHADKDSDEIYAQMSLQP------VNSE----KDVFLVPDFGLR-PSKHPNEFFC 150
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
KTLTASDTSTHGGFSVPRRAAE FPPLDY Q P+QEL+ +DLH W FRHIYRGQP+
Sbjct: 151 KTLTASDTSTHGGFSVPRRAAEKLFPPLDYTMQPPTQELIVRDLHDNTWTFRHIYRGQPK 210
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
RHLLTTGWS+FV K L +GD+VLF+R + +L +G+RR+ + + LP S+LS + +
Sbjct: 211 RHLLTTGWSLFVGAKRLRAGDSVLFIRDEKSQLLIGVRRANRQQTTLPSSVLSADSMHIG 270
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSP 352
VL+ A+A + +S F +FY+PRA ++FVIP KY K + + G RF M FE ++S
Sbjct: 271 VLAAAAHAAANRSPFTIFYNPRACPSEFVIPLAKYRKCVYGTQLSAGMRFGMMFETEESG 330
Query: 353 ERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQ 412
+RR G + GI+DLDP RWP SKWR L V WDE D Q +VS WEI+ SL
Sbjct: 331 KRRYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCCDKQNRVSSWEIETPESLFIFPSL 390
Query: 413 SSPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENV-GFVSPLYGCDTV 471
+S + L G A D+ S+ +L+ EN+ G +S Y
Sbjct: 391 TSGLKRPLHGGFLAGETDW-------------GSLVKRPMLRVPENIRGDLS--YAPTLC 435
Query: 472 NHPLGFEMRAPAHQSLALNGIRKDNINELVR 502
+ PL + P +L +++D+ N LV+
Sbjct: 436 SEPLMKMLLRPQMVNLNGTTLQQDSTNNLVK 466
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 64/94 (68%), Gaps = 2/94 (2%)
Query: 676 PGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDP-AKGWRILYTDS 734
P R+ TKV K GS VGR+ID+ Y++L S +E +F +EGLL DP GW+++Y D
Sbjct: 832 PPLRTYTKVQKAGS-VGRSIDVTSFKNYDELCSAIECMFGLEGLLNDPRGSGWKLVYVDY 890
Query: 735 ENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
ENDV+++GDDPW EF + V I I + EV++M+
Sbjct: 891 ENDVLLIGDDPWEEFVSCVRCIRILSPSEVQQMS 924
>gi|297817514|ref|XP_002876640.1| hypothetical protein ARALYDRAFT_349241 [Arabidopsis lyrata subsp.
lyrata]
gi|297322478|gb|EFH52899.1| hypothetical protein ARALYDRAFT_349241 [Arabidopsis lyrata subsp.
lyrata]
Length = 608
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 179/391 (45%), Positives = 246/391 (62%), Gaps = 30/391 (7%)
Query: 47 SSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSS--AFPPIEVPNF 104
SSSS +Y ELW CAGPL +P+ V YFPQGH+EQ+ +S+ E+P F
Sbjct: 12 SSSSRFYQDQLYTELWKVCAGPLVEVPRADERVFYFPQGHMEQLVASTNQGIKSEEIPVF 71
Query: 105 DLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPEL-EGLNLEAKQLEDLGVDEEGGGRS 163
DL P+I C+V+ + L A E DEVY Q+ L P+ + E +L+ +E
Sbjct: 72 DLPPKILCRVLGITLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLVE------------ 119
Query: 164 PTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWR 223
PTK H F K LTASDTSTHGGFSV R+ A +C P LD Q P+QELV +DLHG EWR
Sbjct: 120 PTKQMFHSFVKILTASDTSTHGGFSVLRKHATECLPALDMTQATPTQELVTRDLHGFEWR 179
Query: 224 FRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDS 283
F+HI+RGQPRRHLLTTGWS FVS K LV+GDA +FLRG++G+LR+G+RR + ++ +P S
Sbjct: 180 FKHIFRGQPRRHLLTTGWSTFVSSKRLVAGDAFVFLRGENGDLRVGVRRLARHQSTMPTS 239
Query: 284 ILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFK 343
++S Q+ + VL+ ++AV T ++F VFY PR + F++ KY++ I + +GTRF+
Sbjct: 240 VISSQSMHLGVLATASHAVRTTTIFVVFYKPRISQ--FIVGVNKYMEAIKHGFSLGTRFR 297
Query: 344 MRFEMDDSPER-----------RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQ 392
MRFE ++SPER R G + G DL +WP SKWR L V+WDE
Sbjct: 298 MRFEGEESPERIVLDSETWSVFRFTGTIVGTGDLSS-QWPASKWRSLQVQWDEPTTVQRP 356
Query: 393 EQVSPWEIDRSVSLPPLSIQS-SPRMKKLRT 422
++VSPWEI+ ++ P+S + P++K R+
Sbjct: 357 DKVSPWEIEPFLATSPISTPAQQPQLKCKRS 387
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 77/137 (56%), Gaps = 28/137 (20%)
Query: 658 KLFGFSLTSETP----------------------TPSSQSPGK-----RSCTKVHKQGSL 690
+LFGF LTS P TP+S + K RS TKV QG
Sbjct: 455 RLFGFDLTSNPPAPLPQDKQPMDTCGAAKCQEPITPTSMNEQKKQQTSRSRTKVQMQGIA 514
Query: 691 VGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFC 750
VGRA+DL L Y++L+ ELE +F ++G LR P W +++TD E D+M+ GDDPW+EFC
Sbjct: 515 VGRAVDLTLLKSYDELIEELEEMFEIQGQLR-PRDKWIVVFTDDEGDMMLAGDDPWNEFC 573
Query: 751 NEVSKIHIYTQEEVEKM 767
KI IY+ +EV+KM
Sbjct: 574 KMAKKIFIYSSDEVKKM 590
>gi|300373066|gb|ADG43164.1| auxin response factor 30 [Zea mays]
Length = 809
Score = 347 bits (890), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 181/373 (48%), Positives = 244/373 (65%), Gaps = 13/373 (3%)
Query: 38 SSSSSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP 97
SSSS+ S + ELWHACAGPL LP VVYFPQGH EQVA+S+
Sbjct: 2 SSSSAASIGQQPPEEEKKCLNSELWHACAGPLVCLPTVATRVVYFPQGHSEQVAASTNKE 61
Query: 98 -PIEVPNF-DLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGV 155
+PN+ +L PQ+ C++ DV + A+ E DEVY Q+ L P L ++ D +
Sbjct: 62 VDGHIPNYPNLPPQLICQLHDVTMHADVETDEVYAQMTLQP--------LNPQEQNDPYL 113
Query: 156 DEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAK 215
E G S K + FCKTLTASDTSTHGGFSVPRRAAE FPPLD+ QQ P QEL+A+
Sbjct: 114 PAEMGIMS--KQPTNYFCKTLTASDTSTHGGFSVPRRAAERVFPPLDFTQQPPVQELIAR 171
Query: 216 DLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQ 275
D+H VEW+FRHI+RGQP+RHLLTTGWS+FVS K LV+GD+VLF+ + +L LGIRR+ +
Sbjct: 172 DIHDVEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASR 231
Query: 276 PRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP 335
P+ +P S+LS + + +L+ A+A +T S F +F++PRA+ ++FVIP KY+K + +
Sbjct: 232 PQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFFNPRASPSEFVIPLSKYIKAVFHT 291
Query: 336 -ICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQ 394
I +G RF+M FE ++S RR G +T ++D DP RWP+S WR + V WDE + +
Sbjct: 292 RISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPR 351
Query: 395 VSPWEIDRSVSLP 407
VS WEI+ + P
Sbjct: 352 VSLWEIEPLTTFP 364
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Query: 676 PGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDS 734
P R+ KV+K GS VGR++D+ R + Y +L EL +F ++G L DP + GW++++ D
Sbjct: 707 PTTRTFVKVYKSGS-VGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDR 765
Query: 735 ENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
ENDV+++GDDPW F N V I I + E+V KM
Sbjct: 766 ENDVLLLGDDPWESFVNSVWYIKILSPEDVHKM 798
>gi|350539990|ref|NP_001234602.1| auxin response factor 12 [Solanum lycopersicum]
gi|310697410|gb|ADP06660.1| auxin response factor 12 [Solanum lycopersicum]
Length = 405
Score = 347 bits (890), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 173/365 (47%), Positives = 242/365 (66%), Gaps = 29/365 (7%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKVVDVQ 118
ELW CAGPL +PK V YFPQGH+EQ+ AS++ +P F+LQP+I C+V+ +Q
Sbjct: 31 ELWRLCAGPLVDVPKNEERVYYFPQGHMEQLEASTNQELNQSIPLFNLQPKILCRVLHIQ 90
Query: 119 LLANKENDEVYTQVALLPQPELEGLNLEAKQLE----DLGVDEEGGGRSPTKSTPHMFCK 174
LLA +++DEVY Q+ALLP EA Q+E DL + E P + H FCK
Sbjct: 91 LLAEQDSDEVYAQIALLP---------EADQVEPTSPDLSLPE------PPRPKVHFFCK 135
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
LTASDTSTHGGFS+ R+ A +C PPLD Q P+QELVAKDLHG EW F+HI+RGQPRR
Sbjct: 136 VLTASDTSTHGGFSILRKHANECLPPLDMTQATPAQELVAKDLHGFEWHFKHIFRGQPRR 195
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS FVS K LV+GD+ +FLR GE+R+GIRR + + +P S++S Q+ + V
Sbjct: 196 HLLTTGWSTFVSSKRLVTGDSFVFLRSGKGEVRIGIRRLARQPSSMPQSVISSQSMHLGV 255
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
L+ ++AV+T++MF V+Y PR + F+I KY++ + + +G RFKM+FE ++ PE+
Sbjct: 256 LATASHAVTTQTMFVVYYKPRTS--QFIIGLNKYLEAVKHRYSVGMRFKMKFEGEEIPEK 313
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS------LPP 408
R G + G+ D +W +SKWR L V+WDE ++VSPW+I+ V+ +PP
Sbjct: 314 RFTGTIVGVED-SSSQWKDSKWRSLKVQWDEPASVPRPDRVSPWDIEPFVASVATPLVPP 372
Query: 409 LSIQS 413
+ +++
Sbjct: 373 MGVKN 377
>gi|414878008|tpg|DAA55139.1| TPA: hypothetical protein ZEAMMB73_057592 [Zea mays]
Length = 886
Score = 347 bits (890), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 180/363 (49%), Positives = 244/363 (67%), Gaps = 15/363 (4%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA+S+ ++PN+ +L PQ+ C++ +V
Sbjct: 25 ELWHACAGPLVSLPVVGSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLICQLHNV 84
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E EVY Q+ L P L+ E ++ L ++ G PT + FCKTLT
Sbjct: 85 TMHADAETGEVYAQMTLQP------LSPEEQKEPFLPIELGAGSNQPT----NYFCKTLT 134
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ Q P QELVA+DLH EW+FRHI+RGQP+RHLL
Sbjct: 135 ASDTSTHGGFSVPRRAAEKVFPPLDFSQHPPVQELVARDLHDNEWKFRHIFRGQPKRHLL 194
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+++F+ + +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 195 TTGWSVFVSAKRLVAGDSIIFIWNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAA 254
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F +FY+PR + +FVIP KYVK + + + +G RF+M FE ++S RR
Sbjct: 255 AAHAAATNSRFTIFYNPRPS--EFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRY 312
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPR 416
G +T I+DLD RWPNS WR + V WDE D Q +VS WEI+ ++ P R
Sbjct: 313 MGTITCISDLDSERWPNSHWRSVKVGWDESTAGDKQPRVSLWEIEPLMAFPMYPTAFPLR 372
Query: 417 MKK 419
+K+
Sbjct: 373 LKR 375
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 64/93 (68%), Gaps = 2/93 (2%)
Query: 682 TKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMV 740
KV+K GS GR++D+ R + Y +L SELE LF +EG L DP + GW++++ D END+++
Sbjct: 756 VKVYKSGS-PGRSLDITRFSSYYELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDILL 814
Query: 741 VGDDPWHEFCNEVSKIHIYTQEEVEKMTIGTTD 773
VGDDPW EF N V I I + ++V++M G D
Sbjct: 815 VGDDPWQEFVNSVWCIKILSPQDVQQMVRGGGD 847
>gi|357166682|ref|XP_003580798.1| PREDICTED: auxin response factor 12-like [Brachypodium distachyon]
Length = 831
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 178/352 (50%), Positives = 238/352 (67%), Gaps = 15/352 (4%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIE--VPNF-DLQPQIFCKVVD 116
ELWHACAGPL LP G VVYFPQGH EQVA+S+ +E +PN+ +L PQ+ C++ D
Sbjct: 33 ELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTN-KEVEGHIPNYPNLPPQLICQLHD 91
Query: 117 VQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTL 176
V + A+ E DEVY Q+ L P L ++ D + E G S K + FCKTL
Sbjct: 92 VTMHADVETDEVYAQMTLQP--------LNPQEQNDAYLPAEMGIMS--KQPTNYFCKTL 141
Query: 177 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHL 236
TASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+A+D+H VEW+FRHI+RGQP+RHL
Sbjct: 142 TASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDVEWKFRHIFRGQPKRHL 201
Query: 237 LTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLS 296
LTTGWS+FVS K LV+GD+VLF+ + +L LGIRR+ + + +P S+LS + + +L+
Sbjct: 202 LTTGWSVFVSAKRLVAGDSVLFIWNEKNQLWLGIRRASRTQTVMPSSVLSSDSMHIGLLA 261
Query: 297 VVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERR 355
A+A ST S F +FY+PRA ++FVIP KY+K + + I +G RF+M FE ++S RR
Sbjct: 262 AAAHAASTNSRFTIFYNPRACPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRR 321
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +T ++D DP RW +S WR + V WDE + +VS WEI+ + P
Sbjct: 322 YMGTITEVSDADPVRWASSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFP 373
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 61/93 (65%), Gaps = 2/93 (2%)
Query: 676 PGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDS 734
P R+ KV+K GS VGR++D+ R + Y +L EL +F + G L DP + GW++++ D
Sbjct: 729 PTSRTFVKVYKSGS-VGRSLDITRFSNYAELREELGQMFGIRGQLDDPDRSGWQLVFVDR 787
Query: 735 ENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
ENDV+++GDDPW F N V I I + E+V K+
Sbjct: 788 ENDVLLLGDDPWESFVNSVWYIKILSPEDVHKL 820
>gi|356564347|ref|XP_003550416.1| PREDICTED: auxin response factor 5-like [Glycine max]
Length = 934
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 180/361 (49%), Positives = 238/361 (65%), Gaps = 18/361 (4%)
Query: 51 SSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPI-EVPNF-DLQP 108
S + ++ ELWHACAGPL SLP+ G++V YFPQGH EQVA+S+ ++PN+ +L
Sbjct: 38 SGVRKTLNSELWHACAGPLVSLPQVGSLVFYFPQGHSEQVAASTRRTATSQIPNYPNLPS 97
Query: 109 QIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAK--QLEDLGVDEEGGGRSPTK 166
Q+ C+V + L A+KE DE+Y Q+ L P LN E + + D G+ +K
Sbjct: 98 QLLCQVQNATLHADKETDEIYAQMTLQP------LNSEREVFPISDFGLKH-------SK 144
Query: 167 STPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRH 226
FCKTLTASDTSTHGGFSVPRRAAE FPPLDY Q P+QELV +DLH W FRH
Sbjct: 145 HPSEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYTIQPPTQELVVRDLHDNTWTFRH 204
Query: 227 IYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILS 286
IYRGQP+RHLLTTGWS+FV K L +GD+VLF+R + +LR+G+RR + + LP S+LS
Sbjct: 205 IYRGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLRVGVRRVNRQQTTLPSSVLS 264
Query: 287 KQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIM-NPICIGTRFKMR 345
+ + VL+ A+A + +S F +FY+PRA ++FVIP KY K + + +G RF M
Sbjct: 265 ADSMHIGVLAAAAHAAANRSPFTIFYNPRACPSEFVIPLAKYRKSVFGTQVSVGMRFGMM 324
Query: 346 FEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS 405
FE ++S +RR G + GI+D+DP RWP SKWR + V WDE D Q +VS WEI+ S
Sbjct: 325 FETEESGKRRYMGTIVGISDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWEIETPES 384
Query: 406 L 406
L
Sbjct: 385 L 385
Score = 85.9 bits (211), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 60/91 (65%), Gaps = 2/91 (2%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRD-PAKGWRILYTDSEND 737
R+ TKV K GS VGR+ID+ Y +L+ +E +F ++GLL D GW+++Y D E+D
Sbjct: 828 RTYTKVQKAGS-VGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWKLVYVDYESD 886
Query: 738 VMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
V++VGDDPW EF V I I + EV++M+
Sbjct: 887 VLLVGDDPWEEFVGCVRCIRILSPSEVQQMS 917
>gi|357161592|ref|XP_003579140.1| PREDICTED: auxin response factor 25-like [Brachypodium distachyon]
Length = 934
Score = 347 bits (889), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 177/363 (48%), Positives = 245/363 (67%), Gaps = 13/363 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ V+YFPQGH EQVA+S+ ++PN+ +L PQ+ C++ +V
Sbjct: 66 ELWHACAGPLVSLPVVGSRVIYFPQGHSEQVAASTNKEVDGQIPNYPNLPPQLICQLHNV 125
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L+ E ++ L ++ + PT + FCKTLT
Sbjct: 126 TMHADVETDEVYAQMTLQP------LSPEEQKEPFLPIELGAASKQPT----NYFCKTLT 175
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRR+AE FPPLD+ Q P QEL+A+DLH EW+FRHI+RGQP+RHLL
Sbjct: 176 ASDTSTHGGFSVPRRSAEKVFPPLDFSLQPPCQELIARDLHDNEWKFRHIFRGQPKRHLL 235
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+V+F+ + +L LGIR + +P+ +P S+LS + + +L+
Sbjct: 236 TTGWSVFVSAKRLVAGDSVIFIWNDNNQLLLGIRHANRPQTIMPSSVLSSDSMHIGLLAA 295
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F +FY+PR++ ++FVIP KYVK + + + +G RF+M FE ++S RR
Sbjct: 296 AAHAAATNSRFTIFYNPRSSPSEFVIPLAKYVKSVYHTRVSVGMRFRMLFETEESSVRRY 355
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPR 416
G VT I+DLD RWPNS WR + V WDE + Q +VS WEI+ + P R
Sbjct: 356 MGTVTAISDLDSVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPLTTFPMYPTAFPLR 415
Query: 417 MKK 419
+K+
Sbjct: 416 LKR 418
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 62/88 (70%), Gaps = 2/88 (2%)
Query: 682 TKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMV 740
KV+K GS GR++D+ + + Y +L SELEHLF +EG L DP + GW++++ D END+++
Sbjct: 804 VKVYKSGS-PGRSLDITKFSSYYELRSELEHLFGLEGQLEDPVRSGWQLVFVDRENDILL 862
Query: 741 VGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
VGDDPW EF N V I I + ++V +M
Sbjct: 863 VGDDPWQEFVNSVWCIKILSPQDVHQMV 890
>gi|449517487|ref|XP_004165777.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 9-like,
partial [Cucumis sativus]
Length = 584
Score = 346 bits (888), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 165/346 (47%), Positives = 229/346 (66%), Gaps = 15/346 (4%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNFDLQPQIFCKVV 115
+Y ELW ACAGPL +P+ V YFPQGH+EQ+ +S+ +P F+L +I C+V+
Sbjct: 24 LYMELWRACAGPLVDIPRVDERVFYFPQGHMEQLEASTNLELNKRIPLFNLDSKILCRVI 83
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKT 175
++ LA+ E+DEVY Q+ L+P E+ Q E +D P + H FCK
Sbjct: 84 HIEPLADHESDEVYAQITLMP---------ESNQNEPKSMDPCP--PEPPRPVVHSFCKV 132
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
LTASDTSTHGGFSV R+ A +C PPLD P+Q+LVAKDLHG EWRF+HI+RGQPRRH
Sbjct: 133 LTASDTSTHGGFSVLRKHATECLPPLDMTLATPTQDLVAKDLHGYEWRFKHIFRGQPRRH 192
Query: 236 LLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVL 295
LLTTGWS FV+ K L +GD+ +FLRG +GELR+G+RR + ++ +P S++S Q+ + VL
Sbjct: 193 LLTTGWSTFVTSKRLSAGDSFVFLRGDNGELRVGVRRRARQQSSMPPSVISSQSMHLGVL 252
Query: 296 SVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERR 355
+ ++AV+T++ F V+Y PR F+I KY++ + N +G RF M FE +DSPERR
Sbjct: 253 ATASHAVTTQTRFVVYYKPRT--CQFIISLNKYLEAVNNKFSVGMRFNMSFEGEDSPERR 310
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
+G + G D+ P+ WPNS WR L V+WDE ++VSPW+I+
Sbjct: 311 FSGTIIGAVDISPH-WPNSSWRSLRVQWDEQTSILRPDRVSPWDIE 355
>gi|356552071|ref|XP_003544394.1| PREDICTED: auxin response factor 5-like [Glycine max]
Length = 929
Score = 346 bits (888), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 182/359 (50%), Positives = 238/359 (66%), Gaps = 14/359 (3%)
Query: 51 SSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPI-EVPNF-DLQP 108
S + ++ ELWHACAGPL SLP+ G++V YFPQGH EQVA+S+ ++PN+ +L
Sbjct: 35 SGVRKTLNSELWHACAGPLVSLPQVGSLVFYFPQGHSEQVAASTRRTATSQIPNYPNLPY 94
Query: 109 QIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKST 168
Q+ C+V +V L A+KE DE+Y Q+ L P LN E E + + G S K
Sbjct: 95 QLLCQVQNVTLHADKETDEIYAQMTLQP------LNSER---EVFPISDFGHKHS--KHP 143
Query: 169 PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIY 228
FCKTLTASDTSTHGGFSVPRRAAE FPPLDY Q P+QELV +DLH W FRHIY
Sbjct: 144 SEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYTIQPPTQELVVRDLHDNTWTFRHIY 203
Query: 229 RGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQ 288
RGQP+RHLLTTGWS+FV K L +GD+VLF+R + +LR+G+RR + + LP S+LS
Sbjct: 204 RGQPKRHLLTTGWSLFVGSKRLRAGDSVLFIRDERSQLRVGVRRVNRQQTTLPSSVLSAD 263
Query: 289 NSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIM-NPICIGTRFKMRFE 347
+ + VL+ A+A + +S F +FY+PRA ++FVIP KY K + + +G RF M FE
Sbjct: 264 SMHIGVLAAAAHAAANRSPFTIFYNPRACPSEFVIPLAKYRKSVFGTQVSVGMRFGMMFE 323
Query: 348 MDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSL 406
++S +RR G + GI+D+DP RWP SKWR + V WDE D Q +VS WEI+ SL
Sbjct: 324 TEESGKRRYMGTIVGISDVDPLRWPGSKWRNIQVEWDEPGCGDKQNRVSVWEIETPESL 382
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 60/91 (65%), Gaps = 2/91 (2%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRD-PAKGWRILYTDSEND 737
R+ TKV K GS VGR+ID+ Y +L+ +E +F ++GLL D GW+++Y D E+D
Sbjct: 823 RTYTKVQKAGS-VGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKCSGWKLVYVDYESD 881
Query: 738 VMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
V++VGDDPW EF V I I + EV++M+
Sbjct: 882 VLLVGDDPWEEFVGCVRCIRILSPSEVQQMS 912
>gi|218195802|gb|EEC78229.1| hypothetical protein OsI_17874 [Oryza sativa Indica Group]
Length = 833
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 176/359 (49%), Positives = 242/359 (67%), Gaps = 12/359 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIE--VPNF-DLQPQIFCKVVD 116
ELWHACAGPL LP G VVYFPQGH EQVA+S+ +E +PN+ +L Q+ C++ D
Sbjct: 31 ELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTN-KEVEGHIPNYPNLPAQLICQLHD 89
Query: 117 VQLLANKENDEVYTQVALLPQPELEGLN-LEAKQLEDLGVDEEGGGRSP------TKSTP 169
V + A+ E DEVY Q+ L P + L L ++ + E+ P +K
Sbjct: 90 VTMHADVETDEVYAQMTLQPLNPVRRLGFLHDVCSAEVLMQEQNDAYLPAEMGIMSKQPT 149
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
+ FCKTLTASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+A+D+H +EW+FRHI+R
Sbjct: 150 NYFCKTLTASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFR 209
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQN 289
GQP+RHLLTTGWS+FVS K LV+GD+VLF+ + +L LGIRR+ +P+ +P S+LS +
Sbjct: 210 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDS 269
Query: 290 SYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEM 348
+ +L+ A+A +T S F +FY+PRA+ ++FVIP KY+K + + I +G RF+M FE
Sbjct: 270 MHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFET 329
Query: 349 DDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
++S RR G +T ++D DP RWP+S WR + V WDE + +VS WEI+ + P
Sbjct: 330 EESSVRRYMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFP 388
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Query: 676 PGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDS 734
P R+ KV+K GS VGR++D+ R + Y +L EL +F ++G L DP + GW++++ D
Sbjct: 731 PATRTFVKVYKSGS-VGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDR 789
Query: 735 ENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
ENDV+++GDDPW F N V I I + E+V KM
Sbjct: 790 ENDVLLLGDDPWESFVNSVWYIKILSPEDVHKM 822
>gi|255538886|ref|XP_002510508.1| Auxin response factor, putative [Ricinus communis]
gi|223551209|gb|EEF52695.1| Auxin response factor, putative [Ricinus communis]
Length = 950
Score = 346 bits (887), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 177/351 (50%), Positives = 235/351 (66%), Gaps = 18/351 (5%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPI-EVPNF-DLQPQIFCK 113
+I ELW+ACAGPL SLP+ G++V YFPQGH EQVA S+ ++PN+ +L Q+ C+
Sbjct: 41 TINSELWYACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTKRTATSQIPNYPNLASQLLCQ 100
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAK--QLEDLGVDEEGGGRSPTKSTPHM 171
V +V L A+++ DE+Y Q++L P +N E + D G+ P+K
Sbjct: 101 VHNVTLHADRDTDEIYAQMSLQP------VNSEKDVFPIPDFGL-------KPSKHPSEF 147
Query: 172 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQ 231
FCKTLTASDTSTHGGFSVPRRAAE FPPLDY Q P+QELV +DLH W FRHIYRGQ
Sbjct: 148 FCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYTMQPPTQELVVRDLHDNTWTFRHIYRGQ 207
Query: 232 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSY 291
P+RHLLTTGWS+FV K L +GD+VLF+R + +L +G+RR+ + + LP +LS + +
Sbjct: 208 PKRHLLTTGWSLFVGSKRLKAGDSVLFIRDEKSQLLVGVRRANRQQTTLPSLVLSADSMH 267
Query: 292 PNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDD 350
VL+ A+A + +S F +FY+PRA ++FVIP KY K + + +G RF M FE ++
Sbjct: 268 IGVLAAAAHAAANRSPFTIFYNPRACPSEFVIPLAKYRKAVFGTQVSVGMRFGMMFETEE 327
Query: 351 SPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
S +RR G + GI+DLDP RWP SKWR L V WDE SD Q +VS WEI+
Sbjct: 328 SGKRRYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCSDKQNRVSSWEIE 378
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 64/95 (67%), Gaps = 2/95 (2%)
Query: 675 SPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTD 733
+P R+ TKV K GS VGR+ID+ Y +L S +E +F +EGLL +P + GW+++Y D
Sbjct: 832 APRVRTYTKVQKAGS-VGRSIDVSGFKNYEELCSAIECMFGLEGLLNNPRESGWKLVYVD 890
Query: 734 SENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
ENDV+++GDDPW EF V I I + EV++M+
Sbjct: 891 YENDVLLIGDDPWEEFVGCVRCIRILSPSEVQQMS 925
>gi|168022796|ref|XP_001763925.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684930|gb|EDQ71329.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 620
Score = 346 bits (887), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 173/357 (48%), Positives = 242/357 (67%), Gaps = 20/357 (5%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
ELWHACAGPLT LP ++V+Y+PQGH+EQV ++ + + + +L + C++ ++L
Sbjct: 7 ELWHACAGPLTQLPPVDSLVMYWPQGHIEQVRAADVYQASKQFS-NLPAHLLCRISKIEL 65
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTK-STPHMFCKTLTA 178
A+ + DEV+ Q+ L PQ EL +K+ +D SP + S FCKTLTA
Sbjct: 66 QADPQTDEVFAQMDLTPQYEL------SKETKD--------APSPIQQSNVRSFCKTLTA 111
Query: 179 SDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLT 238
SDTSTHGGFSVPRRAAE+C P LD+ P QELVAKDLHG +W FRHIYRG PRRHLLT
Sbjct: 112 SDTSTHGGFSVPRRAAEECLPLLDHNMVPPCQELVAKDLHGKDWSFRHIYRGHPRRHLLT 171
Query: 239 TGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVV 298
TGWS+FVSQK LV+GD V+FLRG++G+LR+G+RR+ + + + S N + VL+
Sbjct: 172 TGWSVFVSQKRLVAGDTVIFLRGENGQLRVGVRRASKQQPQARSTHFSSANLHLGVLAAA 231
Query: 299 ANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCNG 358
++A + + F V Y+PR + ++FVIPY KY++ N + +G+RFKM+FE ++S ERR +G
Sbjct: 232 SHAATERLRFSVIYNPRTSPSEFVIPYHKYLRSEDNNLTVGSRFKMKFETEESTERRYSG 291
Query: 359 VVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSP 415
+ I+D+DP +WP+S WR + V WDE S+ E+VSPWEI+ L P+S +P
Sbjct: 292 TIVEISDVDPLKWPSSAWRSMKVEWDES-ASERHERVSPWEIE---PLVPISTLPTP 344
Score = 92.4 bits (228), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 73/155 (47%), Gaps = 42/155 (27%)
Query: 657 CKLFGFSLTSET-PTPSSQSPG-------------------------------------- 677
CKLFGF+L + PTP S +P
Sbjct: 446 CKLFGFNLADKVVPTPVSSAPSLCEDSEGSGPWSSSDHTSSTSADTRVGMIVTGTYQPLV 505
Query: 678 --KRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSE 735
RS TKV+ G VGR IDL + Y L L LF +EG L D KGW+++YTD E
Sbjct: 506 APVRSGTKVYYSGK-VGRTIDLKKCESYAALRRMLASLFGLEGQLDDVTKGWQLVYTDHE 564
Query: 736 NDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIG 770
NDV++VGDDPW EFCN V + + + ++ ++G
Sbjct: 565 NDVLLVGDDPWEEFCNCVRSLKVLSPQDAAGQSVG 599
>gi|102139794|gb|ABF69979.1| transcriptional factor B3 family protein [Musa acuminata]
Length = 898
Score = 345 bits (884), Expect = 7e-92, Method: Compositional matrix adjust.
Identities = 175/350 (50%), Positives = 239/350 (68%), Gaps = 22/350 (6%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNF-DLQPQIFCKVVDVQ 118
ELWHACAGPL SLP G+ V AS++ ++PN+ L PQ+ C++ +V
Sbjct: 23 ELWHACAGPLVSLPAVGSRVA----------ASTNKEVDSQIPNYPSLPPQLICQLHNVT 72
Query: 119 LLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTA 178
+ A+ E DEVY Q+ L P L A++ +D + + G +P+K + FCKTLTA
Sbjct: 73 MHADVETDEVYAQMTLQP--------LSAQEQKDPYLPADLG--TPSKQPTNYFCKTLTA 122
Query: 179 SDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLT 238
SDTSTHGGFSVPRRAAE FPPLD+ QQ P+QELVA+DLHG EW+FRHI+RGQP+RHLLT
Sbjct: 123 SDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELVARDLHGNEWKFRHIFRGQPKRHLLT 182
Query: 239 TGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVV 298
TGWS+FVS K LV+GD+VLF+ ++ +L LGIRR+ +P+ +P S+LS + + +L+
Sbjct: 183 TGWSVFVSAKRLVAGDSVLFIWNENNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAA 242
Query: 299 ANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRCN 357
A+A +T S F +FY+PRA+ ++FVIP KYVK + + + +G RF+M FE ++S RR
Sbjct: 243 AHAAATNSRFTIFYNPRASPSEFVIPLTKYVKAVYHTRVSVGMRFRMLFETEESSVRRYM 302
Query: 358 GVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +TGI+DLDP RWPNS WR + V WDE + Q +VS WEI+ + P
Sbjct: 303 GTITGISDLDPVRWPNSHWRSVKVGWDESTAGEKQPRVSLWEIEPLTTFP 352
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 65/89 (73%), Gaps = 2/89 (2%)
Query: 680 SCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSENDV 738
+ KV+K GS GR++D+ R + Y++L SEL HLF +EG L DP + GW++++ D E+DV
Sbjct: 765 TFVKVYKSGSF-GRSLDITRFSSYHELRSELGHLFGLEGQLEDPLRSGWQLVFVDREDDV 823
Query: 739 MVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
++VGDDPW EF N VS I I + EEV++M
Sbjct: 824 LLVGDDPWQEFVNSVSCIKILSPEEVQQM 852
>gi|356530459|ref|XP_003533798.1| PREDICTED: uncharacterized protein LOC100804628 [Glycine max]
Length = 1125
Score = 345 bits (884), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 179/351 (50%), Positives = 238/351 (67%), Gaps = 11/351 (3%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNF-DLQPQIFCKV 114
+I ELWHACAGPL SLP G+VVVYFPQGH EQVA+S +P++ +L ++ C +
Sbjct: 19 TINSELWHACAGPLVSLPPVGSVVVYFPQGHSEQVAASMQKEADFIPSYPNLPSKLICML 78
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
+V L A+ E DEVY Q+ L P + + EA D+G+ + + PT+ FCK
Sbjct: 79 HNVALHADPETDEVYAQMTLQP---VNKYDKEALLASDMGLKQ---NQQPTE----FFCK 128
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLTASDTSTHGGFSVPRRAAE FPPLD+ Q P+QE+VAKDLH W FRHIYRGQP+R
Sbjct: 129 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDNTWTFRHIYRGQPKR 188
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS+FVS K L +GD+VLF+R + +L LGI+R+ + + L S++S + + +
Sbjct: 189 HLLTTGWSVFVSTKRLFAGDSVLFIRDEKQQLLLGIKRANRQQPALSSSVISSDSMHIGI 248
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
L+ A+A S S F +FY+PRA+ ++FVIP KY K + N + +G RF+M FE ++S R
Sbjct: 249 LAAAAHAASNNSPFTIFYNPRASPSEFVIPLAKYNKALFNQVSLGMRFRMMFETEESGVR 308
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS 405
R G +TGITDLDP RW NS+WR L V WDE + +VS W+I+ V+
Sbjct: 309 RYMGTITGITDLDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWDIEPVVT 359
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 67/99 (67%), Gaps = 2/99 (2%)
Query: 672 SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKG-WRIL 730
++Q+ R+ TKV K GS VGR ID+ R GY++L +L +F +EG L DP + W+++
Sbjct: 991 ANQTQRMRTYTKVQKCGS-VGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTEWKLV 1049
Query: 731 YTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
Y D END+++VGDDPW EF + V I I + EV++M++
Sbjct: 1050 YVDHENDILLVGDDPWEEFVSCVQSIKILSSSEVQQMSL 1088
>gi|326487574|dbj|BAK05459.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 970
Score = 345 bits (884), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 175/347 (50%), Positives = 236/347 (68%), Gaps = 11/347 (3%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNF-DLQPQIFCKV 114
+I ELWHAC+GPL ++P G++VVYFPQGH EQVA+S +PN+ L ++ CK+
Sbjct: 20 AINSELWHACSGPLVAMPPVGSLVVYFPQGHSEQVAASMHKEVDIIPNYPSLPSKLICKL 79
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
+ + L A+ E DEVY Q+ L P + + +A +LG+ + K FCK
Sbjct: 80 LSLTLHADSETDEVYAQMTLQP---VNKYDRDAMLASELGLKQ-------NKQPVEFFCK 129
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLTASDTSTHGGFSVPRRAAE FPPLD+ Q P+QEL+AKDLH + W+FRHI+RGQP+R
Sbjct: 130 TLTASDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELMAKDLHDIPWKFRHIFRGQPKR 189
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS+FVS K L++GD+VLF+R + +L LGIRR+ +P+ L S+LS + + +
Sbjct: 190 HLLTTGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRATRPQPALSSSVLSSDSMHIGI 249
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
L+ A+A + S F +FY+PRA+ ++FVIP KY K + + +G RF+M FE +DS R
Sbjct: 250 LAAAAHAAANSSPFTIFYNPRASPSEFVIPLAKYNKALYTQVSLGMRFRMLFETEDSGVR 309
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
R G +TGI DLDP RW NS WR L V WDE S+ + +VS WEI+
Sbjct: 310 RYMGTITGIGDLDPVRWKNSHWRNLQVGWDESTASERRTRVSIWEIE 356
>gi|15223692|ref|NP_173414.1| auxin response factor 5 [Arabidopsis thaliana]
gi|21263766|sp|P93024.3|ARFE_ARATH RecName: Full=Auxin response factor 5; AltName:
Full=Auxin-responsive protein IAA24; AltName:
Full=Transcription factor MONOPTEROS
gi|12248005|gb|AAG50094.1|AF334716_1 auxin response factor 5 [Arabidopsis thaliana]
gi|2961085|gb|AAC39410.1| transcription factor [Arabidopsis thaliana]
gi|25083308|gb|AAN72061.1| transcription factor [Arabidopsis thaliana]
gi|31711776|gb|AAP68244.1| At1g19850 [Arabidopsis thaliana]
gi|332191785|gb|AEE29906.1| auxin response factor 5 [Arabidopsis thaliana]
Length = 902
Score = 345 bits (884), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 180/353 (50%), Positives = 237/353 (67%), Gaps = 13/353 (3%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVA-SSSAFPPIEVPNF-DLQPQIFCKV 114
I ELWHACAGPL LP+ G++V YF QGH EQVA S+ +VPN+ +L Q+ C+V
Sbjct: 51 INSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQV 110
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
+V L A+K++DE+Y Q++L P + + D G+ G + PT+ FCK
Sbjct: 111 HNVTLHADKDSDEIYAQMSLQPVHS----ERDVFPVPDFGMLR--GSKHPTE----FFCK 160
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLTASDTSTHGGFSVPRRAAE FPPLDY Q P+QELV +DLH W FRHIYRGQP+R
Sbjct: 161 TLTASDTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKR 220
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS+FV K L +GD+VLF+R + +L +G+RR+ + + LP S+LS + + V
Sbjct: 221 HLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGV 280
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIM-NPICIGTRFKMRFEMDDSPE 353
L+ A+A + ++ F +FY+PRA A+FVIP KY K I + + +G RF M FE +DS +
Sbjct: 281 LAAAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGK 340
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSL 406
RR G + GI+DLDP RWP SKWR L V WDE +D +VSPW+I+ SL
Sbjct: 341 RRYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIETPESL 393
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 63/95 (66%), Gaps = 2/95 (2%)
Query: 675 SPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDP-AKGWRILYTD 733
+P R+ TKV K GS VGR+ID+ Y +L S +E +F +EGLL P + GW+++Y D
Sbjct: 789 TPRVRTYTKVQKTGS-VGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVD 847
Query: 734 SENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
E+DV++VGDDPW EF V I I + EV++M+
Sbjct: 848 YESDVLLVGDDPWEEFVGCVRCIRILSPTEVQQMS 882
>gi|312282955|dbj|BAJ34343.1| unnamed protein product [Thellungiella halophila]
Length = 901
Score = 345 bits (884), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 180/353 (50%), Positives = 237/353 (67%), Gaps = 13/353 (3%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVA-SSSAFPPIEVPNF-DLQPQIFCKV 114
I ELWHACAGPL LP+ G++V YF QGH EQVA S+ +VPN+ +L Q+ C+V
Sbjct: 48 INSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQV 107
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
+V L A+K++DE+Y Q++L P + + D G+ G + PT+ FCK
Sbjct: 108 HNVTLHADKDSDEIYAQMSLQPVHS----ERDVFPVPDFGLLR--GSKHPTE----FFCK 157
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLTASDTSTHGGFSVPRRAAE FPPLDY Q P+QELV +DLH W FRHIYRGQP+R
Sbjct: 158 TLTASDTSTHGGFSVPRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPKR 217
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS+FV K L +GD+VLF+R + +L +G+RR+ + + LP S+LS + + V
Sbjct: 218 HLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGV 277
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIM-NPICIGTRFKMRFEMDDSPE 353
L+ A+A + ++ F +FY+PRA A+FVIP KY K I + + +G RF M FE +DS +
Sbjct: 278 LAAAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGK 337
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSL 406
RR G + GI+DLDP RWP SKWR L V WDE +D +VSPW+I+ SL
Sbjct: 338 RRYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIETPESL 390
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 63/95 (66%), Gaps = 2/95 (2%)
Query: 675 SPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDP-AKGWRILYTD 733
+P R+ TKV K GS VGR+ID+ Y +L S +E +F +EGLL P + GW+++Y D
Sbjct: 788 TPRVRTYTKVQKTGS-VGRSIDVTSFRDYEELKSAIECMFGLEGLLTQPQSSGWKLVYVD 846
Query: 734 SENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
E+DV++VGDDPW EF V I I + EV++M+
Sbjct: 847 YESDVLLVGDDPWEEFVGCVRCIRILSPTEVQQMS 881
>gi|449533118|ref|XP_004173524.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 9-like,
partial [Cucumis sativus]
Length = 669
Score = 344 bits (883), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 180/373 (48%), Positives = 250/373 (67%), Gaps = 16/373 (4%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKVVDVQ 118
ELW AGPL +P+ V+YFPQGH+EQ+ AS++ ++P F+L +I C+VVD +
Sbjct: 1 ELWKVSAGPLVEIPRINEKVLYFPQGHMEQLEASTNQELNQKLPLFNLPXKILCQVVDTR 60
Query: 119 LLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTA 178
LLA +++DEVY Q+ L+P EA Q L E K+ H FCK LTA
Sbjct: 61 LLAEQDSDEVYAQITLMP---------EANQA--LPSTFEPPLIECRKTKVHSFCKVLTA 109
Query: 179 SDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLT 238
SDTSTHGGFSV R+ A +C PPLD QQ P+QELVAKDLHG EWRF+HI+RGQPRRHLLT
Sbjct: 110 SDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHGYEWRFKHIFRGQPRRHLLT 169
Query: 239 TGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVV 298
TGWS FV+ K LV+GD+ +FLRG++GELR+G+RR + ++ +P S++S + + VL+
Sbjct: 170 TGWSTFVTSKRLVAGDSFVFLRGENGELRVGVRRLARQQSSMPSSVISSHSMHLGVLATA 229
Query: 299 ANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCNG 358
++AVST++ F V+Y PRA+ F++ KY++ + N +G RFKMRFE ++SPERR +G
Sbjct: 230 SHAVSTQTRFVVYYKPRASQ--FIVSLSKYMEAMNNKFMVGMRFKMRFEGEESPERRFSG 287
Query: 359 VVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS-LPPLSIQSSPRM 417
+ G+ D+ P+ WPNS+WR L V+WDE ++VSPWEI+ V+ P + S +
Sbjct: 288 TIVGVDDMSPH-WPNSEWRSLRVQWDELASIQRPDRVSPWEIEPFVAPTPSIPHSISVKN 346
Query: 418 KKLRTGLQAPPPD 430
K+ R L+ P D
Sbjct: 347 KRPRPPLEIPDSD 359
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 683 KVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVG 742
KV QG VGRA+DL L GY L+ ELE +F+++G LR P W I++TD E D+M++G
Sbjct: 562 KVQMQGMAVGRAVDLTTLEGYGQLIDELEKMFDIKGELR-PRNKWEIVFTDDEGDMMLMG 620
Query: 743 DDPWHEFCNEVSKIHIYTQEEVE 765
D PW EFCN V +I+I++ ++V+
Sbjct: 621 DYPWQEFCNMVRRIYIWSSQDVK 643
>gi|302142628|emb|CBI19831.3| unnamed protein product [Vitis vinifera]
Length = 907
Score = 344 bits (883), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 182/361 (50%), Positives = 238/361 (65%), Gaps = 23/361 (6%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPI-EVPNF-DLQPQIFCK 113
+I ELWHACAGPL SLP+ G++V YFPQGH EQVA S+ ++PN+ +L Q+ C+
Sbjct: 41 AINSELWHACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTKRTATSQIPNYPNLPSQLMCQ 100
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAK--QLEDLGVDEEGGGRSPTKSTPHM 171
V +V L A+K+ DE+Y Q++L P +N E + D G+ P+K
Sbjct: 101 VHNVTLHADKDTDEIYAQMSLQP------VNSEKDIFPIPDFGL-------KPSKHPSEF 147
Query: 172 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQ 231
FCKTLTASDTSTHGGFSVPRRAAE FPPLDY Q P+QEL+ +DLH + + FRHIYRGQ
Sbjct: 148 FCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYSMQPPTQELIVRDLHDITYTFRHIYRGQ 207
Query: 232 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSY 291
P+RHLLTTGWS+FVS K L +GDAVLF+R + +L LG+RR+ + + LP S+LS + +
Sbjct: 208 PKRHLLTTGWSVFVSAKRLRAGDAVLFIRDEKSQLLLGVRRANRQQTSLPSSVLSADSMH 267
Query: 292 PNVLSVVANAVSTKSMFHVFYSPR-----ATHADFVIPYQKYVKIIM-NPICIGTRFKMR 345
VL+ A+A + +S F +FY+PR A ++FVIP KY K + I +G RF M
Sbjct: 268 IGVLAAAAHAAANRSPFTIFYNPRHAFFLACPSEFVIPLAKYRKSVYGTQISVGMRFGMM 327
Query: 346 FEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS 405
FE ++S +RR G + GI+DLDP WP SKWR L V WDE D Q +VS WEI+ S
Sbjct: 328 FETEESGKRRYMGTIVGISDLDPLSWPGSKWRNLQVEWDESGCGDKQSRVSSWEIETPES 387
Query: 406 L 406
L
Sbjct: 388 L 388
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/94 (47%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
Query: 676 PGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRD-PAKGWRILYTDS 734
P R+ TKV K GS VGR+ID+ Y +L S +E +F +EGLL D GW+++Y D
Sbjct: 794 PPMRTYTKVQKMGS-VGRSIDVASFKNYEELCSAIECMFGLEGLLNDQKGSGWKLVYVDY 852
Query: 735 ENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
ENDV++VGDDPW EF V I I + EV++M+
Sbjct: 853 ENDVLLVGDDPWKEFVGCVRCIRILSPSEVQQMS 886
>gi|2982222|gb|AAC60794.1| transcription factor [Arabidopsis thaliana]
Length = 902
Score = 344 bits (883), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 180/353 (50%), Positives = 237/353 (67%), Gaps = 13/353 (3%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVA-SSSAFPPIEVPNF-DLQPQIFCKV 114
I ELWHACAGPL LP+ G++V YF QGH EQVA S+ +VPN+ +L Q+ C+V
Sbjct: 51 INSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQV 110
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
+V L A+K++DE+Y Q++L P + + D G+ G + PT+ FCK
Sbjct: 111 HNVTLHADKDSDEIYAQMSLQPVHS----ERDVFPVPDFGMLR--GSKHPTE----FFCK 160
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLTASDTSTHGGFSVPRRAAE FPPLDY Q P+QELV +DLH W FRHIYRGQP+R
Sbjct: 161 TLTASDTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKR 220
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS+FV K L +GD+VLF+R + +L +G+RR+ + + LP S+LS + + V
Sbjct: 221 HLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGV 280
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIM-NPICIGTRFKMRFEMDDSPE 353
L+ A+A + ++ F +FY+PRA A+FVIP KY K I + + +G RF M FE +DS +
Sbjct: 281 LAAAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGK 340
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSL 406
RR G + GI+DLDP RWP SKWR L V WDE +D +VSPW+I+ SL
Sbjct: 341 RRYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIETPESL 393
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 62/95 (65%), Gaps = 2/95 (2%)
Query: 675 SPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDP-AKGWRILYTD 733
+P R+ KV K GS VGR+ID+ Y +L S +E +F +EGLL P + GW+++Y D
Sbjct: 789 TPRVRTYIKVQKTGS-VGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVD 847
Query: 734 SENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
E+DV++VGDDPW EF V I I + EV++M+
Sbjct: 848 YESDVLLVGDDPWEEFVGCVRCIRILSPTEVQQMS 882
>gi|2708484|gb|AAB92476.1| IAA24 [Arabidopsis thaliana]
Length = 890
Score = 344 bits (883), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 180/353 (50%), Positives = 237/353 (67%), Gaps = 13/353 (3%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVA-SSSAFPPIEVPNF-DLQPQIFCKV 114
I ELWHACAGPL LP+ G++V YF QGH EQVA S+ +VPN+ +L Q+ C+V
Sbjct: 39 INSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQV 98
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
+V L A+K++DE+Y Q++L P + + D G+ G + PT+ FCK
Sbjct: 99 HNVTLHADKDSDEIYAQMSLQPVHS----ERDVFPVPDFGMLR--GSKHPTE----FFCK 148
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLTASDTSTHGGFSVPRRAAE FPPLDY Q P+QELV +DLH W FRHIYRGQP+R
Sbjct: 149 TLTASDTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKR 208
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS+FV K L +GD+VLF+R + +L +G+RR+ + + LP S+LS + + V
Sbjct: 209 HLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGV 268
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIM-NPICIGTRFKMRFEMDDSPE 353
L+ A+A + ++ F +FY+PRA A+FVIP KY K I + + +G RF M FE +DS +
Sbjct: 269 LAAAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGK 328
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSL 406
RR G + GI+DLDP RWP SKWR L V WDE +D +VSPW+I+ SL
Sbjct: 329 RRYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIETPESL 381
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 63/95 (66%), Gaps = 2/95 (2%)
Query: 675 SPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDP-AKGWRILYTD 733
+P R+ TKV K GS VGR+ID+ Y +L S +E +F +EGLL P + GW+++Y D
Sbjct: 777 TPRVRTYTKVQKTGS-VGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVD 835
Query: 734 SENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
E+DV++VGDDPW EF V I I + EV++M+
Sbjct: 836 YESDVLLVGDDPWEEFVGCVRCIRILSPTEVQQMS 870
>gi|10086486|gb|AAG12546.1|AC007797_6 IAA24 [Arabidopsis thaliana]
Length = 850
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 180/353 (50%), Positives = 237/353 (67%), Gaps = 13/353 (3%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVA-SSSAFPPIEVPNF-DLQPQIFCKV 114
I ELWHACAGPL LP+ G++V YF QGH EQVA S+ +VPN+ +L Q+ C+V
Sbjct: 40 INSELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQV 99
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
+V L A+K++DE+Y Q++L P + + D G+ G + PT+ FCK
Sbjct: 100 HNVTLHADKDSDEIYAQMSLQPVHS----ERDVFPVPDFGMLR--GSKHPTE----FFCK 149
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLTASDTSTHGGFSVPRRAAE FPPLDY Q P+QELV +DLH W FRHIYRGQP+R
Sbjct: 150 TLTASDTSTHGGFSVPRRAAEKLFPPLDYSAQPPTQELVVRDLHENTWTFRHIYRGQPKR 209
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS+FV K L +GD+VLF+R + +L +G+RR+ + + LP S+LS + + V
Sbjct: 210 HLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGV 269
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIM-NPICIGTRFKMRFEMDDSPE 353
L+ A+A + ++ F +FY+PRA A+FVIP KY K I + + +G RF M FE +DS +
Sbjct: 270 LAAAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETEDSGK 329
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSL 406
RR G + GI+DLDP RWP SKWR L V WDE +D +VSPW+I+ SL
Sbjct: 330 RRYMGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIETPESL 382
Score = 76.3 bits (186), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 51/74 (68%), Gaps = 2/74 (2%)
Query: 675 SPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDP-AKGWRILYTD 733
+P R+ TKV K GS VGR+ID+ Y +L S +E +F +EGLL P + GW+++Y D
Sbjct: 778 TPRVRTYTKVQKTGS-VGRSIDVTSFKDYEELKSAIECMFGLEGLLTHPQSSGWKLVYVD 836
Query: 734 SENDVMVVGDDPWH 747
E+DV++VGDDPW
Sbjct: 837 YESDVLLVGDDPWE 850
>gi|224069204|ref|XP_002326300.1| predicted protein [Populus trichocarpa]
gi|222833493|gb|EEE71970.1| predicted protein [Populus trichocarpa]
Length = 1057
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 178/350 (50%), Positives = 237/350 (67%), Gaps = 11/350 (3%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNF-DLQPQIFCKVV 115
I ELWHACAGPL SLP G++VVYFPQGH EQVA+S +P++ +L ++ C +
Sbjct: 20 INSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKETDFIPSYPNLPSKLICMLH 79
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKT 175
+V L A+ E DEVY Q+ L P + E EA D+G+ + R PT+ FCKT
Sbjct: 80 NVTLHADVETDEVYAQMTLQPVSKYEK---EALLASDMGLKQ---NRQPTE----FFCKT 129
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
LTASDTSTHGGFSVPRRAAE FPPLD+ Q P+QELVA+DLH W FRHIYRGQP+RH
Sbjct: 130 LTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVARDLHDNTWTFRHIYRGQPKRH 189
Query: 236 LLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVL 295
LLTTGWS+FVS K L +GD+VLF+R + +L LGIRR+ + + L S++S + + +L
Sbjct: 190 LLTTGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISSDSMHIGIL 249
Query: 296 SVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERR 355
+ A+A + S F +FY+PRA+ ++FVIP+ KY K + + +G RF+M FE ++S RR
Sbjct: 250 AAAAHAAANNSPFTIFYNPRASPSEFVIPFSKYNKALYTQVSLGMRFRMMFETEESGVRR 309
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS 405
G +TGI+D+DP RW NS+WR L V WDE + +VS WEI+ V+
Sbjct: 310 YMGTITGISDMDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWEIEPVVT 359
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 69/99 (69%), Gaps = 2/99 (2%)
Query: 672 SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDP-AKGWRIL 730
++Q+ R+ TKV K+GS VGR+ID+ R GYN+L +L +F +EG L DP + W+++
Sbjct: 923 TNQTQRMRTYTKVQKRGS-VGRSIDVTRYKGYNELRHDLARMFGIEGQLEDPQSSDWKLV 981
Query: 731 YTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
Y D END+++VGDDPW EF + V I I + EV++M++
Sbjct: 982 YVDHENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMSL 1020
>gi|295844280|gb|ADG43137.1| auxin response factor 3 [Zea mays]
Length = 816
Score = 343 bits (881), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 176/351 (50%), Positives = 236/351 (67%), Gaps = 14/351 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL LP G VVYFPQGH EQVA+S+ +PN+ +L PQ+ C++ DV
Sbjct: 29 ELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLPPQLICQLHDV 88
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L ++ D + E G S K + FCKTLT
Sbjct: 89 TMHADVETDEVYAQMTLQP--------LNPQEQNDAYLPAEMGIMS--KQPTNYFCKTLT 138
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+A+D+H VEW+FRHI+RG P+RHLL
Sbjct: 139 ASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDVEWKFRHIFRG-PKRHLL 197
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K LV+GD+VLF+ + +L LGIR + +P+ +P S+LS + + +L+
Sbjct: 198 TTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRHATRPQTVMPSSVLSSDSMHIGLLAA 257
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A +T S F +FY+PRA+ +FVIP KY+K + + I +G RF+M FE ++S RR
Sbjct: 258 AAHAAATNSRFTIFYNPRASPTEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRY 317
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +T ++D DP RWP+S WR + V WDE + +VS WEI+ + P
Sbjct: 318 MGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFP 368
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Query: 676 PGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDS 734
P R+ KV+K GS VGR++D+ R + Y +L EL +F ++G L DP + GW++++ D
Sbjct: 714 PTTRTFVKVYKSGS-VGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDR 772
Query: 735 ENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
ENDV+++GDDPW F N V I I + E+V KM
Sbjct: 773 ENDVLLLGDDPWESFVNSVWYIKILSPEDVHKM 805
>gi|42569975|ref|NP_182176.2| auxin response factor 11 [Arabidopsis thaliana]
gi|110739686|dbj|BAF01750.1| ARF1 family auxin responsive transcription factor like protein
[Arabidopsis thaliana]
gi|330255620|gb|AEC10714.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 601
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 176/386 (45%), Positives = 243/386 (62%), Gaps = 20/386 (5%)
Query: 41 SSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPI- 99
++ A+ +S S +Y ELW ACAGPL +P+ G V YFPQGH+EQ+ +S+ +
Sbjct: 2 ANVEADFRTSGSNDDELYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVD 61
Query: 100 -EVPNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPEL-EGLNLEAKQLEDLGVDE 157
E+P F+L P+I C+V+ V L A E DEVY Q+ L P+ + E +L+ +E
Sbjct: 62 QEIPVFNLPPKILCRVLSVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLVE------ 115
Query: 158 EGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDL 217
P K T F K LTASDTSTHGGFSV R+ A +C P LD Q P+QELVA+DL
Sbjct: 116 ------PAKPTVDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDL 169
Query: 218 HGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPR 277
HG EWRF+HI+RGQPRRHLLTTGWS FV+ K LV+GDA +FLRG+ G+LR+G+RR + +
Sbjct: 170 HGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQ 229
Query: 278 NGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPIC 337
+ +P S++S Q+ VL+ ++AV+T ++F VFY PR + F+I KY+ + N
Sbjct: 230 STMPASVISSQSMRLGVLATASHAVTTTTIFVVFYKPRISQ--FIISVNKYMMAMKNGFS 287
Query: 338 IGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSP 397
+G R++MRFE ++SPER G + G DL +WP SKWR L ++WDE +VSP
Sbjct: 288 LGMRYRMRFEGEESPERIFTGTIIGSGDLSS-QWPASKWRSLQIQWDEPSSIQRPNKVSP 346
Query: 398 WEID--RSVSLPPLSIQSSPRMKKLR 421
WEI+ +L P Q + K+ R
Sbjct: 347 WEIEPFSPSALTPTPTQQQSKSKRSR 372
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 74/147 (50%), Gaps = 34/147 (23%)
Query: 654 AAGCKLFGFSLTSE---------------------------------TPTPSSQSPGKRS 680
+ C+LFGF LTS+ +P Q RS
Sbjct: 432 TSSCRLFGFDLTSKPASATIPHDKQLISVDSNISDSTTKCQDPNSSNSPKEQKQQTSTRS 491
Query: 681 CTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMV 740
KV QG+ VGRA+DL L Y++L+ ELE +F +EG L P W I++TD E D M+
Sbjct: 492 RIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGEL-SPKDKWAIVFTDDEGDRML 550
Query: 741 VGDDPWHEFCNEVSKIHIYTQEEVEKM 767
VGDDPW+EFC K+ IY +EV+KM
Sbjct: 551 VGDDPWNEFCKMAKKLFIYPSDEVKKM 577
>gi|168037233|ref|XP_001771109.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677642|gb|EDQ64110.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 372
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 186/366 (50%), Positives = 242/366 (66%), Gaps = 19/366 (5%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPP-IEVPNF-DLQPQIFCK 113
S+ ELWHACAGPL SLP G+ VVYFPQGH+EQVA+S+ +PN+ L +I C
Sbjct: 5 SLNSELWHACAGPLVSLPPVGSRVVYFPQGHIEQVAASTQKDADAHIPNYPSLPSKIICL 64
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFC 173
+ +V L A+ E DEVY Q+ LLP + + K+ L D E + PT+ FC
Sbjct: 65 LDNVTLHADPETDEVYAQMILLP------IQISEKE-ALLSPDLEVVNKQPTE----YFC 113
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
KTLTASDTSTHGGFS+PRRAAE FPPLD+ + P+QELVA+DLH EW FRHIYRGQPR
Sbjct: 114 KTLTASDTSTHGGFSIPRRAAEKVFPPLDFTRVPPAQELVARDLHDQEWHFRHIYRGQPR 173
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
RHLLTTGWS+FVS K L +GD+VLF+R G L LGIRR+ + + +P S+LS + +
Sbjct: 174 RHLLTTGWSVFVSAKRLQAGDSVLFIRDDKGNLLLGIRRANRQQTVMPSSVLSSDSMHFG 233
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSP 352
VL+ ++A +T S F +FY+PR + ++FVIP KY K + N +G RF+M FE ++S
Sbjct: 234 VLAAASHAAATSSRFKIFYNPRQSPSEFVIPLTKYHKALYNTQFTVGMRFRMVFETEESS 293
Query: 353 ERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS-----LP 407
RR G +TG+ DLDP RWP S WR L V WDE + Q +VS WEI+ + P
Sbjct: 294 VRRYVGTITGLGDLDPIRWPKSHWRSLKVGWDESTAGERQHRVSLWEIEPLTTPFLLCPP 353
Query: 408 PLSIQS 413
PL+++S
Sbjct: 354 PLALRS 359
>gi|225444647|ref|XP_002276637.1| PREDICTED: auxin response factor 19-like [Vitis vinifera]
Length = 1084
Score = 343 bits (880), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 177/351 (50%), Positives = 235/351 (66%), Gaps = 11/351 (3%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNF-DLQPQIFCKV 114
SI ELWHACAGPL SLP G++VVYFPQGH EQVA+S VP++ +L ++ C +
Sbjct: 19 SINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKETECVPSYPNLPSKLICML 78
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
+V L A+ E DEVY Q+ L P + + EA DLG+ + R P + FCK
Sbjct: 79 HNVTLHADAETDEVYAQMTLQP---VSKYDKEALLASDLGLKQ---SRQPVE----FFCK 128
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLTASDTSTHGGFSVPRRAAE FPPLD+ Q P+QE+VA+DLH W FRHIYRGQP+R
Sbjct: 129 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVARDLHDNTWTFRHIYRGQPKR 188
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS+FVS K L +GD+VLF+R + +L LGIRR+ + + L S++S + + +
Sbjct: 189 HLLTTGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISCDSMHIGI 248
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
L+ A+A + S F +FY+PRA+ ++FVIP KY K + + +G RF+M FE ++S R
Sbjct: 249 LAAAAHAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVR 308
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS 405
R G +TGI++LD RW NS+WR L V WDE + +VS WEI+ V+
Sbjct: 309 RYMGTITGISELDAARWKNSQWRNLQVGWDESTAGERPSRVSIWEIEPVVT 359
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 69/99 (69%), Gaps = 2/99 (2%)
Query: 672 SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRIL 730
++Q+ R+ TKV K+GS VGR+ID+ R GY++L +L +F +EG L DP + W+++
Sbjct: 950 TNQAQRMRTYTKVQKRGS-VGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLV 1008
Query: 731 YTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
Y D END+++VGDDPW EF + V I I + EV++M++
Sbjct: 1009 YVDHENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMSL 1047
>gi|224128584|ref|XP_002320368.1| predicted protein [Populus trichocarpa]
gi|222861141|gb|EEE98683.1| predicted protein [Populus trichocarpa]
Length = 392
Score = 343 bits (879), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 179/396 (45%), Positives = 248/396 (62%), Gaps = 25/396 (6%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP------PIEVPNFDLQPQI 110
+Y ELWHACAGPL +P+ G+ V YFPQGH+EQV S+ +E+P +DL +I
Sbjct: 2 LYTELWHACAGPLVYVPRAGDKVFYFPQGHMEQVLLSTVAARMNEEGKMEMPIYDLPYKI 61
Query: 111 FCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPH 170
CKVV V+L A DEV+ ++ LLP E + L+ K + L + + RS
Sbjct: 62 LCKVVHVELKAEAGTDEVFARITLLPVAEEDELS-SNKDGKSLPLHRKTCARS------- 113
Query: 171 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRG 230
F K LT SDT THGGFSVP+R A+ C PPLD QQ P QEL+AKDLHG EW F+HIYRG
Sbjct: 114 -FTKKLTPSDTKTHGGFSVPKRHADQCLPPLDKSQQPPVQELLAKDLHGFEWCFKHIYRG 172
Query: 231 QPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNS 290
QP+RHL+T+GWS FVS K LV+GD+ +FLRG+ GELR+G+RR+++ N L +ILS +
Sbjct: 173 QPKRHLITSGWSTFVSSKRLVAGDSFIFLRGESGELRVGVRRAMKLENNLSANILSSHSM 232
Query: 291 YPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDD 350
+LS ++A++T SMF +++ P + A+F+IPY +Y+K GTRF+M FE ++
Sbjct: 233 QLGILSSASHAITTGSMFTIYFHPWTSPAEFIIPYDQYMKSAEIDYSAGTRFRMLFEGEE 292
Query: 351 SPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSD---HQEQVSPWEIDRSVSLP 407
E+R G V G D+D RWPNS+WR L V+WD S+ HQE+VSPW I+ +
Sbjct: 293 CAEQRFEGTVVGTEDVDHIRWPNSEWRILKVKWDA--ASEPFVHQERVSPWNIE---PIE 347
Query: 408 PLSIQSSPR--MKKLRTGLQAPPPDYPVSARGGGVL 441
P+ + + R + K+ P + +S + G L
Sbjct: 348 PIRKKHASRLHLHKMECIADKSLPRFLISVKEGQYL 383
>gi|255550359|ref|XP_002516230.1| Auxin response factor, putative [Ricinus communis]
gi|223544716|gb|EEF46232.1| Auxin response factor, putative [Ricinus communis]
Length = 1119
Score = 342 bits (878), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 176/351 (50%), Positives = 237/351 (67%), Gaps = 11/351 (3%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNF-DLQPQIFCKV 114
SI ELWHACAGPL +LP G++VVYFPQGH EQVA+S +P++ +L ++ C +
Sbjct: 19 SINSELWHACAGPLVALPPVGSLVVYFPQGHSEQVAASMQKETDFIPSYPNLPSKLICML 78
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
+V L A+ E DEVY Q+ L P + + EA D+G+ + R PT+ FCK
Sbjct: 79 HNVTLHADAETDEVYAQMTLQP---VNKYDKEALLASDMGLKQS---RQPTE----FFCK 128
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLTASDTSTHGGFSVPRRAAE FPPLD+ Q P+QELVA+DLH W FRHIYRGQP+R
Sbjct: 129 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVARDLHDNTWTFRHIYRGQPKR 188
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS+FVS K L +GD+VLF+R + +L LGIRR+ + + L S++S + + +
Sbjct: 189 HLLTTGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISSDSMHIGI 248
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
L+ A+A + S F +FY+PRA+ ++FVIP+ KY K + + +G RF+M FE ++S R
Sbjct: 249 LAAAAHAAANNSPFTIFYNPRASPSEFVIPFSKYNKAMYTQVSLGMRFRMMFETEESGVR 308
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS 405
R G +TGI+DLDP RW S+WR L V WDE + +VS WE++ V+
Sbjct: 309 RYMGTITGISDLDPVRWKTSQWRNLQVGWDESTAGERPSRVSIWEVEPVVT 359
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 69/99 (69%), Gaps = 2/99 (2%)
Query: 672 SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDP-AKGWRIL 730
++Q+ R+ TKV K+GS VGR+ID+ R GY++L +L +F +EG L DP + W+++
Sbjct: 985 ANQTQRMRTYTKVQKRGS-VGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQSSDWKLV 1043
Query: 731 YTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
Y D END+++VGDDPW EF + V I I + EV++M++
Sbjct: 1044 YVDHENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMSL 1082
>gi|168000388|ref|XP_001752898.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696061|gb|EDQ82402.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 758
Score = 342 bits (877), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 179/349 (51%), Positives = 233/349 (66%), Gaps = 14/349 (4%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPP-IEVPNF-DLQPQIFCK 113
S+ ELWHACAG L SLP G+ VVYFPQGH+EQVA+S+ + +PN+ L ++FC
Sbjct: 3 SLNSELWHACAGSLVSLPPVGSRVVYFPQGHIEQVAASTQKEADVPIPNYPSLPSRLFCL 62
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFC 173
+ +V L A+ E DEVY Q+ LLP ++ EA D + P K FC
Sbjct: 63 LDNVSLHADHETDEVYAQMTLLP---IQNSEKEALLAPDSVI--------PNKQPSEYFC 111
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
KTLTASDTSTHGGFS+PRRAAE FPPLD+ + P+QELVA+DLH +W FRHIYRGQPR
Sbjct: 112 KTLTASDTSTHGGFSIPRRAAEKVFPPLDFTKSPPAQELVARDLHDQDWHFRHIYRGQPR 171
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
RHLLTTGWS+FVS K L +GD+VLF+R L LGIRR+ + ++ +P S+LS + +
Sbjct: 172 RHLLTTGWSVFVSIKRLQAGDSVLFIRDDKDHLLLGIRRANRQQSVMPSSVLSSDSMHFG 231
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSP 352
VL+ ++A +T S F +FY+PR + ++FVIP KY K + N + +G RF+M FE ++S
Sbjct: 232 VLAAASHAAATSSRFKIFYNPRQSPSEFVIPLAKYQKALYNTQVTLGMRFRMAFETEESN 291
Query: 353 ERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
R+ G +T I DLDP RWP S WR L V WDE I D Q +VS WEI+
Sbjct: 292 VRKYMGTITCIGDLDPARWPKSDWRSLKVGWDESIAGDRQLRVSLWEIE 340
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 59/90 (65%), Gaps = 2/90 (2%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSEND 737
R+C +VHK GS VGR++D+ + Y +L EL F ++ L+ DP+ GW+I++ D+E+D
Sbjct: 670 RTCFQVHKLGS-VGRSLDVRNFSNYTELRQELARRFQLDCLMEDPSSSGWQIVFVDNEDD 728
Query: 738 VMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
+++GDDPW EF V I I + EV +M
Sbjct: 729 TLLLGDDPWEEFAKFVKTIKILSPSEVAQM 758
>gi|379323200|gb|AFD01299.1| auxin response factor 5-1 [Brassica rapa subsp. pekinensis]
Length = 867
Score = 342 bits (877), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 178/353 (50%), Positives = 233/353 (66%), Gaps = 13/353 (3%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVA-SSSAFPPIEVPNF-DLQPQIFCKV 114
I ELWHACAGPL +LP+ G++V YFPQGH EQVA S+ +VPN+ +L Q+ C+V
Sbjct: 49 INSELWHACAGPLVTLPQVGSLVYYFPQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQV 108
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
+V L A+K++DE+Y Q++L P D+ E G +K FCK
Sbjct: 109 HNVTLHADKDSDEIYAQMSLQP----------VHSERDVFPVPEFGLLRGSKHPSEFFCK 158
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLTASDTSTHGGFSVPRRAAE FPPLDY Q P+QELV +DLH W FRHIYRGQP+R
Sbjct: 159 TLTASDTSTHGGFSVPRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPKR 218
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS+FV K L +GD+VLF+R + +L +G+RR+ + + LP S+LS + + V
Sbjct: 219 HLLTTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGV 278
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIM-NPICIGTRFKMRFEMDDSPE 353
L+ A+A + ++ F +FY+PRA A+FVIP KY K I + + + RF M FE +DS +
Sbjct: 279 LAAAAHATANRTPFLIFYNPRACPAEFVIPIAKYRKAICGSQLSVSMRFGMMFETEDSGK 338
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSL 406
RR G + GI+DLDP RW SKWR L V WDE +D +VSPW+I+ SL
Sbjct: 339 RRYMGTIVGISDLDPLRWAGSKWRNLQVEWDEPGCNDKPTRVSPWDIETPESL 391
Score = 89.0 bits (219), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 63/95 (66%), Gaps = 2/95 (2%)
Query: 675 SPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDP-AKGWRILYTD 733
+P R+ TKV K GS VGR+ID+ Y +L S +E +F +EGLL P + GW+++Y D
Sbjct: 754 TPRVRTYTKVQKTGS-VGRSIDVTSFRDYKELKSAIECMFGLEGLLTRPQSSGWKLVYVD 812
Query: 734 SENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
E+DV++VGDDPW EF V I I + EV++M+
Sbjct: 813 YESDVLLVGDDPWEEFVGCVKCIRILSPTEVQQMS 847
>gi|297738525|emb|CBI27770.3| unnamed protein product [Vitis vinifera]
Length = 878
Score = 342 bits (876), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 177/351 (50%), Positives = 235/351 (66%), Gaps = 11/351 (3%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNF-DLQPQIFCKV 114
SI ELWHACAGPL SLP G++VVYFPQGH EQVA+S VP++ +L ++ C +
Sbjct: 19 SINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKETECVPSYPNLPSKLICML 78
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
+V L A+ E DEVY Q+ L P + + EA DLG+ + R P + FCK
Sbjct: 79 HNVTLHADAETDEVYAQMTLQP---VSKYDKEALLASDLGLKQS---RQPVE----FFCK 128
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLTASDTSTHGGFSVPRRAAE FPPLD+ Q P+QE+VA+DLH W FRHIYRGQP+R
Sbjct: 129 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVARDLHDNTWTFRHIYRGQPKR 188
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS+FVS K L +GD+VLF+R + +L LGIRR+ + + L S++S + + +
Sbjct: 189 HLLTTGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISCDSMHIGI 248
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
L+ A+A + S F +FY+PRA+ ++FVIP KY K + + +G RF+M FE ++S R
Sbjct: 249 LAAAAHAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVR 308
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS 405
R G +TGI++LD RW NS+WR L V WDE + +VS WEI+ V+
Sbjct: 309 RYMGTITGISELDAARWKNSQWRNLQVGWDESTAGERPSRVSIWEIEPVVT 359
Score = 96.3 bits (238), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 69/99 (69%), Gaps = 2/99 (2%)
Query: 672 SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRIL 730
++Q+ R+ TKV K+GS VGR+ID+ R GY++L +L +F +EG L DP + W+++
Sbjct: 744 TNQAQRMRTYTKVQKRGS-VGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLV 802
Query: 731 YTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
Y D END+++VGDDPW EF + V I I + EV++M++
Sbjct: 803 YVDHENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMSL 841
>gi|194689820|gb|ACF78994.1| unknown [Zea mays]
Length = 585
Score = 342 bits (876), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 222/550 (40%), Positives = 294/550 (53%), Gaps = 77/550 (14%)
Query: 161 GRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGV 220
G K HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDY+Q RPSQEL+AKDLHG+
Sbjct: 24 GDGEKKHASHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYEQLRPSQELIAKDLHGM 83
Query: 221 EWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGL 280
+WRFRHIYRGQPRRHLLTTGWS F+++K LVSGDAVLFLRG DGELRLG+RR+VQ +N
Sbjct: 84 KWRFRHIYRGQPRRHLLTTGWSSFINKKKLVSGDAVLFLRGNDGELRLGVRRAVQLKNEA 143
Query: 281 PDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGT 340
++ +S +LS VAN++ +S+FH+ ++PR ++F++PY K++K + +GT
Sbjct: 144 LLEAVNCTDSKLLMLSAVANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSLNYHFSVGT 203
Query: 341 RFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEI 400
RFK+ E +D+ ER G++ GI+++DP WP SKW+ L+++WD HQ +VSPW+I
Sbjct: 204 RFKVGCENEDANERSF-GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDI 262
Query: 401 DRSVSLPPLSIQSSPRMKKLRTGLQAPPPDY--PVSARGGGVLDFEESVRSSKVLQGQEN 458
+ S ++ + S + K RT L PP D P+ G G D E+ R +VLQGQE
Sbjct: 263 EGVGSSVSVTHRLSSSVSK-RTKLCFPPSDLDTPI-LDGNGRPDSVETERFHRVLQGQEL 320
Query: 459 V-------------------GFVSPLYGCDTVNHPLGFEMRAPAHQSLALNGIRKDNINE 499
V G + D N + M P H LN
Sbjct: 321 VHSSIHGTACSHSSDSPRCQGSYGRRFSADAWNCKMNDVMSGPRH----LNAT------- 369
Query: 500 LVRALPTSYTGFVESNRFPKVLQGQEICPLRSLTGKVDLNLGTWGKPNF---GCNSMNMY 556
GF ES +F +VLQGQE+ + P+F NS
Sbjct: 370 ---GFAYQPLGFSESVKFSEVLQGQEM---------------SQAVPSFMRSAFNSGTQN 411
Query: 557 QASKPNIYPPPSESLSNMFFPYGDMPKTVQH---------HTMPPYA---SNLQRENVKL 604
+P Y S++ ++P T H TM P+A RE V
Sbjct: 412 GRVRPFDYVQRSDATQGYALQQFNLPATEVHSPSSVLMFNQTMVPHAELDGATNREEVH- 470
Query: 605 NSSSIQMPAIGAEIRKANLLNEHKPVEN----IPTPTFKANMRSHKDGSFNGTAAG---C 657
S + AIG E + + + N + T A R+ + GS G AG C
Sbjct: 471 GSRYLSSNAIGREAEPWPSMQQQRASVNGSEPLDTTEASAPARNAESGSV-GRGAGRSNC 529
Query: 658 KLFGFSLTSE 667
KLFGFSLT +
Sbjct: 530 KLFGFSLTEK 539
>gi|36939192|gb|AAQ86960.1| ETTIN-like auxin response factor [Triticum aestivum]
Length = 537
Score = 342 bits (876), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 187/368 (50%), Positives = 238/368 (64%), Gaps = 19/368 (5%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDY+Q RPSQELVAKDLHG +WRFRHIYR
Sbjct: 9 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYQQIRPSQELVAKDLHGAKWRFRHIYR 68
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQN 289
GQPRRHLLTTGWS FV++K LVSGDAVLFLRG DGELRLG+RR++Q +N + +
Sbjct: 69 GQPRRHLLTTGWSSFVNKKKLVSGDAVLFLRGDDGELRLGVRRAIQLKNEALLKAFNSNS 128
Query: 290 SYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMD 349
S + LS VAN++ +S+FH+ Y+PRA ++F+IPY K++K + P CIG RFK+++ +
Sbjct: 129 SKIHTLSAVANSLKHRSVFHICYNPRAAASEFIIPYWKFLKSLNRPFCIGMRFKIQYGSE 188
Query: 350 DSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID---RSVSL 406
D ERR +G++TGI D+DP RW SKW+ L+VRW++ + Q ++SPWEI+ SVS+
Sbjct: 189 DVNERR-SGMITGINDVDPIRWTGSKWKSLLVRWEDGTDCNSQNRLSPWEIEIVGGSVSI 247
Query: 407 P-PLSIQSSPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPL 465
LS SS R K G P Y G G D + + +VLQGQE +G +
Sbjct: 248 AQSLSASSSKRTKLCPQGNVDVPTLY-----GNGRPDSVGADKLPRVLQGQELMGSGTHR 302
Query: 466 YGCDTVNHPLGFEMRAPAHQSLALNGIRKDNINELVRALPTSY-------TGFVESNRFP 518
C P G + + L R ++ P GF ES FP
Sbjct: 303 VTCPP--QPGGATEFRRSDGTGFLANTRSCMLSGPASRFPPQSPYFAYQPVGFGESVGFP 360
Query: 519 KVLQGQEI 526
+VLQGQE+
Sbjct: 361 EVLQGQEV 368
>gi|110739362|dbj|BAF01593.1| ARF1 family auxin responsive transcription factor like protein
[Arabidopsis thaliana]
Length = 601
Score = 341 bits (875), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 175/386 (45%), Positives = 242/386 (62%), Gaps = 20/386 (5%)
Query: 41 SSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPI- 99
++ A+ +S S +Y ELW ACAGPL +P+ G V YFPQGH+EQ+ +S+ +
Sbjct: 2 ANVEADFRTSGSNDDELYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVD 61
Query: 100 -EVPNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPEL-EGLNLEAKQLEDLGVDE 157
E+P F+L P+I C+V+ V L A E DEVY Q+ L P+ + E +L+ +E
Sbjct: 62 QEIPVFNLPPKILCRVLSVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLVE------ 115
Query: 158 EGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDL 217
P K F K LTASDTSTHGGFSV R+ A +C P LD Q P+QELVA+DL
Sbjct: 116 ------PAKPAVDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDL 169
Query: 218 HGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPR 277
HG EWRF+HI+RGQPRRHLLTTGWS FV+ K LV+GDA +FLRG+ G+LR+G+RR + +
Sbjct: 170 HGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQ 229
Query: 278 NGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPIC 337
+ +P S++S Q+ VL+ ++AV+T ++F VFY PR + F+I KY+ + N
Sbjct: 230 STMPASVISSQSMRLGVLATASHAVTTTTIFVVFYKPRISQ--FIISVNKYMMAMKNGFS 287
Query: 338 IGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSP 397
+G R++MRFE ++SPER G + G DL +WP SKWR L ++WDE +VSP
Sbjct: 288 LGMRYRMRFEGEESPERIFTGTIIGSGDLSS-QWPASKWRSLQIQWDEPSSIQRPNKVSP 346
Query: 398 WEID--RSVSLPPLSIQSSPRMKKLR 421
WEI+ +L P Q + K+ R
Sbjct: 347 WEIEPFSPSALTPTPTQQQSKSKRSR 372
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 74/147 (50%), Gaps = 34/147 (23%)
Query: 654 AAGCKLFGFSLTSE---------------------------------TPTPSSQSPGKRS 680
+ C+LFGF LTS+ +P Q RS
Sbjct: 432 TSSCRLFGFDLTSKPASATIPHDKQLISVDSNISDSTTKCHDPNSSNSPKEQKQQTSTRS 491
Query: 681 CTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMV 740
KV QG+ VGRA+DL L Y++L+ ELE +F +EG L P W I++TD E D M+
Sbjct: 492 RIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGEL-SPKDKWAIVFTDDEGDRML 550
Query: 741 VGDDPWHEFCNEVSKIHIYTQEEVEKM 767
VGDDPW+EFC K+ IY +EV+KM
Sbjct: 551 VGDDPWNEFCKMAKKLFIYPSDEVKKM 577
>gi|27450533|gb|AAO14628.1|AF467900_5 hypothetical transcription factor [Prunus persica]
Length = 954
Score = 341 bits (874), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 176/351 (50%), Positives = 230/351 (65%), Gaps = 18/351 (5%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPI-EVPNF-DLQPQIFCK 113
+I ELWHACAGPL LP+ G++ YFPQGH EQVA S+ ++PN+ +L Q+ C+
Sbjct: 42 AINSELWHACAGPLVCLPQVGSLSYYFPQGHSEQVAVSTKRTATSQIPNYPNLPSQLLCQ 101
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQ--LEDLGVDEEGGGRSPTKSTPHM 171
V +V L A+KE DE+Y Q++L P +N E + D G+ P+K
Sbjct: 102 VQNVTLHADKETDEIYAQMSLKP------VNSEKDVFPVPDFGL-------KPSKHPSEF 148
Query: 172 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQ 231
FCKTLTASDTSTHGGFSVPRRAAE FPPLD+ Q PSQELV +DLH W FRHIYRGQ
Sbjct: 149 FCKTLTASDTSTHGGFSVPRRAAEKLFPPLDFTMQPPSQELVVRDLHDNSWTFRHIYRGQ 208
Query: 232 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSY 291
P+RHLLTTGWS+FV K L +GD+VLF+R + +L +G+RR+ + + LP S+LS + +
Sbjct: 209 PKRHLLTTGWSLFVGAKRLRAGDSVLFIRDEKSQLMIGVRRANRQQTTLPSSVLSADSMH 268
Query: 292 PNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDD 350
VL+ A+A + +S F +FY+PRA ++FVIP Y K I + +G RF M FE ++
Sbjct: 269 IGVLAAAAHAAANRSPFTIFYNPRACPSEFVIPLATYQKAIYGTQLSVGMRFGMMFETEE 328
Query: 351 SPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
S +RR G + +DLDP RWP SKWR L V WDE D Q +VS WEI+
Sbjct: 329 SGKRRYMGTIVSTSDLDPLRWPGSKWRNLQVEWDEPGCCDKQNRVSSWEIE 379
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 62/94 (65%), Gaps = 2/94 (2%)
Query: 676 PGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDP-AKGWRILYTDS 734
P R+ TKV K GS VGR+ID+ Y +L S +E +F +EGLL DP GW+++Y D
Sbjct: 837 PPVRTYTKVQKTGS-VGRSIDVTSFKNYEELCSAIECMFGLEGLLNDPRGSGWKLVYVDY 895
Query: 735 ENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
ENDV++VGDDPW EF V I I + EV++M+
Sbjct: 896 ENDVLLVGDDPWEEFVGCVRCIRILSPTEVQQMS 929
>gi|356547962|ref|XP_003542373.1| PREDICTED: uncharacterized protein LOC100805456 [Glycine max]
Length = 1131
Score = 341 bits (874), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 178/351 (50%), Positives = 235/351 (66%), Gaps = 11/351 (3%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNF-DLQPQIFCKV 114
+I ELWHACAGPL SLP G++VVYFPQGH EQVA+S +P++ +L ++ C +
Sbjct: 19 TINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKEADFIPSYPNLPSKLICML 78
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
+V L A+ E DEVY Q+ L P + E EA D+G+ + R PT+ FCK
Sbjct: 79 HNVALHADPETDEVYAQMTLQPVNKYEK---EAILASDMGLKQ---NRQPTE----FFCK 128
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLTASDTSTHGGFSVPRRAAE FPPLDY Q P+QELVAKDLH W FRHIYRGQP+R
Sbjct: 129 TLTASDTSTHGGFSVPRRAAEKIFPPLDYSMQPPAQELVAKDLHDNTWAFRHIYRGQPKR 188
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS+FVS K L +GD+VLF+R + L LGIRR+ + + L S++S + + +
Sbjct: 189 HLLTTGWSVFVSTKRLFAGDSVLFIRDEKQHLLLGIRRANRQQPALSSSVISSDSMHIGI 248
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
L+ A+A + S F +FY+PRA+ ++FV+P KY K+ + +G RF+M FE ++S R
Sbjct: 249 LAAAAHAAANNSPFTIFYNPRASPSEFVVPLAKYNKVTYTQVSLGMRFRMMFETEESGVR 308
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS 405
R G +TGI DLDP RW +S+WR + V WDE + +VS WEI+ V+
Sbjct: 309 RYMGTITGINDLDPVRWKSSQWRNIQVGWDESTAGERPSRVSIWEIEPVVT 359
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 69/99 (69%), Gaps = 2/99 (2%)
Query: 672 SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRIL 730
++Q+P R+ TKV K+GS VGR ID+ R GY++L +L +F +EG L DP + W+++
Sbjct: 996 ANQTPRMRTYTKVQKRGS-VGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPLRTDWKLV 1054
Query: 731 YTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
Y D END+++VGDDPW EF + V I I + EV++M++
Sbjct: 1055 YVDHENDILLVGDDPWDEFVSCVQSIKILSSAEVQQMSL 1093
>gi|79324927|ref|NP_001031548.1| auxin response factor 11 [Arabidopsis thaliana]
gi|238054388|sp|Q9ZPY6.3|ARFK_ARATH RecName: Full=Auxin response factor 11
gi|4415934|gb|AAD20164.1| putative ARF1 family auxin responsive transcription factor
[Arabidopsis thaliana]
gi|20197827|gb|AAM15267.1| putative ARF1 family auxin responsive transcription factor
[Arabidopsis thaliana]
gi|49616357|gb|AAT67075.1| ARF11 [Arabidopsis thaliana]
gi|330255622|gb|AEC10716.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 622
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 173/370 (46%), Positives = 236/370 (63%), Gaps = 20/370 (5%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPI--EVPNFDLQPQIFCKV 114
+Y ELW ACAGPL +P+ G V YFPQGH+EQ+ +S+ + E+P F+L P+I C+V
Sbjct: 39 LYTELWKACAGPLVEVPRYGERVFYFPQGHMEQLVASTNQGVVDQEIPVFNLPPKILCRV 98
Query: 115 VDVQLLANKENDEVYTQVALLPQPEL-EGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFC 173
+ V L A E DEVY Q+ L P+ + E +L+ +E P K T F
Sbjct: 99 LSVTLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLVE------------PAKPTVDSFV 146
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
K LTASDTSTHGGFSV R+ A +C P LD Q P+QELVA+DLHG EWRF+HI+RGQPR
Sbjct: 147 KILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWRFKHIFRGQPR 206
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
RHLLTTGWS FV+ K LV+GDA +FLRG+ G+LR+G+RR + ++ +P S++S Q+
Sbjct: 207 RHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPASVISSQSMRLG 266
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
VL+ ++AV+T ++F VFY PR + F+I KY+ + N +G R++MRFE ++SPE
Sbjct: 267 VLATASHAVTTTTIFVVFYKPRISQ--FIISVNKYMMAMKNGFSLGMRYRMRFEGEESPE 324
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID--RSVSLPPLSI 411
R G + G DL +WP SKWR L ++WDE +VSPWEI+ +L P
Sbjct: 325 RIFTGTIIGSGDLSS-QWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPFSPSALTPTPT 383
Query: 412 QSSPRMKKLR 421
Q + K+ R
Sbjct: 384 QQQSKSKRSR 393
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 74/147 (50%), Gaps = 34/147 (23%)
Query: 654 AAGCKLFGFSLTSE---------------------------------TPTPSSQSPGKRS 680
+ C+LFGF LTS+ +P Q RS
Sbjct: 453 TSSCRLFGFDLTSKPASATIPHDKQLISVDSNISDSTTKCQDPNSSNSPKEQKQQTSTRS 512
Query: 681 CTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMV 740
KV QG+ VGRA+DL L Y++L+ ELE +F +EG L P W I++TD E D M+
Sbjct: 513 RIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGEL-SPKDKWAIVFTDDEGDRML 571
Query: 741 VGDDPWHEFCNEVSKIHIYTQEEVEKM 767
VGDDPW+EFC K+ IY +EV+KM
Sbjct: 572 VGDDPWNEFCKMAKKLFIYPSDEVKKM 598
>gi|297824735|ref|XP_002880250.1| hypothetical protein ARALYDRAFT_904120 [Arabidopsis lyrata subsp.
lyrata]
gi|297326089|gb|EFH56509.1| hypothetical protein ARALYDRAFT_904120 [Arabidopsis lyrata subsp.
lyrata]
Length = 600
Score = 340 bits (873), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 176/386 (45%), Positives = 242/386 (62%), Gaps = 20/386 (5%)
Query: 41 SSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPI- 99
++ A+ +S S +Y ELW ACAGPL +P+ V YFPQGH+EQ+ +S+ +
Sbjct: 2 ANVDADFRTSRSNDDQLYSELWKACAGPLVEVPRSNERVFYFPQGHMEQLVASTNQGVVD 61
Query: 100 -EVPNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPEL-EGLNLEAKQLEDLGVDE 157
E+P F+L P+I C+V+ V L A E DEVY Q+ L P+ + E +L+ +E
Sbjct: 62 QEIPVFNLPPKILCRVLSVMLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLVE------ 115
Query: 158 EGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDL 217
P K T F K LTASDTSTHGGFSV R+ A +C P LD Q P+QELVA+DL
Sbjct: 116 ------PAKPTVDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDL 169
Query: 218 HGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPR 277
HG EWRF+HI+RGQPRRHLLTTGWS FV+ K LV+GDA +FLRG+ G+LR+G+RR + +
Sbjct: 170 HGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGQTGDLRVGVRRLAKQQ 229
Query: 278 NGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPIC 337
+ +P S++S Q+ VL+ ++AV+T ++F VFY PR + F+I KY+ + N
Sbjct: 230 STMPASVISSQSMRLGVLATASHAVTTTTIFVVFYKPRISQ--FIISVNKYMVAMKNGFS 287
Query: 338 IGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSP 397
+G RF+MRFE ++SPER G + G DL +WP SKWR L ++WDE +VSP
Sbjct: 288 LGMRFRMRFEGEESPERIFTGTIVGSGDLS-SQWPASKWRSLQIQWDEPSSIPRPNKVSP 346
Query: 398 WEID--RSVSLPPLSIQSSPRMKKLR 421
WEI+ +L P Q + K+ R
Sbjct: 347 WEIEPFSPSALTPTPTQQQSKSKRSR 372
Score = 105 bits (262), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/145 (40%), Positives = 79/145 (54%), Gaps = 34/145 (23%)
Query: 657 CKLFGFSLTSE---TPTP-----------------------SSQSPGK-------RSCTK 683
C+LFGF LTS+ P P SS SP + RS K
Sbjct: 434 CRLFGFDLTSKPASAPIPCNKQLISVDSNISDSTPKCQDPNSSNSPKEQKQQTSTRSRIK 493
Query: 684 VHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGD 743
V QG+ VGRA+DL L Y++L+ ELE +F +EG L P W I++TD E D+M+VGD
Sbjct: 494 VQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGEL-SPKDKWTIVFTDDEGDMMLVGD 552
Query: 744 DPWHEFCNEVSKIHIYTQEEVEKMT 768
DPW+EFC K+ IY +EV+K++
Sbjct: 553 DPWNEFCKMAKKLFIYPSDEVKKLS 577
>gi|449530666|ref|XP_004172315.1| PREDICTED: auxin response factor 1-like, partial [Cucumis sativus]
Length = 335
Score = 340 bits (873), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 167/327 (51%), Positives = 222/327 (67%), Gaps = 12/327 (3%)
Query: 54 SSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFC 112
S ++Y ELWHACAGPL +LP++ V YFPQGH+EQ+ AS ++P+F+L +I C
Sbjct: 19 SDALYRELWHACAGPLVTLPRQDERVYYFPQGHMEQLEASMHQGLEQQMPSFNLPSKILC 78
Query: 113 KVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMF 172
KVV+V L A + DEVY Q+ LLP E+ Q E D PT+ H F
Sbjct: 79 KVVNVVLRAESDTDEVYAQITLLP---------ESNQNEVTSPDPPLP--EPTRCNVHSF 127
Query: 173 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQP 232
CKTLTASDTSTHGGFSV RR A+DC PPLD QQ P QELVA DLHG +W FRHI+RGQP
Sbjct: 128 CKTLTASDTSTHGGFSVLRRHADDCLPPLDMSQQPPWQELVATDLHGNQWHFRHIFRGQP 187
Query: 233 RRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYP 292
RRHLLTTGWS+FVS K LV+GDA +FLRG++GELR+G+RR ++ N +P S++S + +
Sbjct: 188 RRHLLTTGWSVFVSSKKLVAGDAFIFLRGENGELRVGVRRLMRQLNNMPSSVISSHSMHL 247
Query: 293 NVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSP 352
VL+ ++A+ST ++F VFY PR + + F++ KY++ + + +G RFKMRFE ++ P
Sbjct: 248 GVLATASHAISTGTLFSVFYKPRTSRSTFLVSLNKYLEAQNHKLSVGMRFKMRFEGEEVP 307
Query: 353 ERRCNGVVTGITDLDPYRWPNSKWRCL 379
ER +G + G+ D W NS+WR L
Sbjct: 308 ERSFSGTIVGLGDNASPGWANSEWRSL 334
>gi|379323222|gb|AFD01310.1| auxin response factor 11 [Brassica rapa subsp. pekinensis]
Length = 584
Score = 340 bits (872), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 170/348 (48%), Positives = 225/348 (64%), Gaps = 17/348 (4%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIE--VPNFDLQPQIFCKV 114
+Y ELW ACAGPL +P+ V YFPQGH+EQ+ +S+ ++ +P F+L P+I C+V
Sbjct: 9 LYMELWKACAGPLVEVPRYDERVFYFPQGHMEQLVASTNQRVVDKDIPVFNLPPKILCRV 68
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
++V L A E DEVY Q+ L P E Q E +D P K T F K
Sbjct: 69 LNVMLKAEHETDEVYAQITLQP---------EEDQSEPTSLDPPLT--EPAKQTVDSFVK 117
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
LTASDTSTHGGFSV R+ A +C PPLD Q P+QELVA+DLHG EWRF+HI+RGQPRR
Sbjct: 118 ILTASDTSTHGGFSVLRKHATECLPPLDMTQATPTQELVARDLHGYEWRFKHIFRGQPRR 177
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRG-KDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
HLLTTGWS FV+ K LV+GDA +FLRG + G+LR+G+RR + ++ +P S++S Q+ +
Sbjct: 178 HLLTTGWSTFVTSKRLVAGDAFVFLRGHQTGDLRVGVRRLAKQQSTMPASVISSQSMHLG 237
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
VL+ ++A +T +MF V Y PR + F+I KY+ + IG RF+MRFE ++SPE
Sbjct: 238 VLATASHAFNTTTMFVVLYKPRISQ--FIISVNKYMAAMKKGFGIGMRFRMRFEGEESPE 295
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
R G + G DL P +WP SKWR L V+WDE +VSPWEI+
Sbjct: 296 RIFTGTIVGTGDLSP-QWPASKWRSLQVQWDESSTVQRPNKVSPWEIE 342
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/143 (40%), Positives = 78/143 (54%), Gaps = 32/143 (22%)
Query: 657 CKLFGFSLTSE---TPTPS----------------------------SQSPGKRSCTKVH 685
C+LFGF L S+ P P+ Q+ RS TKV
Sbjct: 420 CRLFGFDLKSKPASAPNPNDKQQLISVDSNNTGSAKCQDPNSSKDQKQQTSSTRSRTKVQ 479
Query: 686 KQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGDDP 745
QG+ VGRA+DL L Y++L+ ELE +F +EG LR K W I++TD E D+M+VGDDP
Sbjct: 480 MQGTAVGRAVDLTLLRSYDELIRELEKMFEIEGELRTKDK-WAIVFTDDEGDMMLVGDDP 538
Query: 746 WHEFCNEVSKIHIYTQEEVEKMT 768
W EFC K+ IY+ +EV+KM+
Sbjct: 539 WDEFCKMAKKLFIYSSDEVKKMS 561
>gi|356556410|ref|XP_003546519.1| PREDICTED: uncharacterized protein LOC100815277 [Glycine max]
Length = 1122
Score = 340 bits (871), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 177/351 (50%), Positives = 237/351 (67%), Gaps = 11/351 (3%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNF-DLQPQIFCKV 114
+I ELWHACAGPL SLP G++VVYFPQGH EQVA+S +P++ +L ++ C +
Sbjct: 19 TINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKEADFIPSYPNLPSKLICML 78
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
+V L A+ E DEVY Q+ L P + + EA D+G+ + + PT+ FCK
Sbjct: 79 HNVALHADPETDEVYAQMTLQP---VNKYDKEAILASDMGLKQN---QQPTE----FFCK 128
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLTASDTSTHGGFSVPRRAAE FPPLD+ Q P+QE+VAKDLH W FRHIYRGQP+R
Sbjct: 129 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDNTWTFRHIYRGQPKR 188
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS+FVS K L +GD+VLF+R + +L LGI+R+ + + L S++S + + +
Sbjct: 189 HLLTTGWSVFVSTKRLFAGDSVLFIRDEKQQLLLGIKRANRQQPALSSSVISSDSMHIGI 248
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
L+ A+A S S F +FY+PRA+ ++FVIP KY K + N +G RF+M FE ++S R
Sbjct: 249 LAAAAHAASNNSPFTIFYNPRASPSEFVIPSAKYNKALYNHASLGMRFRMMFETEESGVR 308
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS 405
R G +TGITD+DP RW NS+WR L V WDE + +VS W+I+ V+
Sbjct: 309 RYMGTITGITDVDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWDIEPVVT 359
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 67/99 (67%), Gaps = 2/99 (2%)
Query: 672 SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKG-WRIL 730
++Q+ R+ TKV K GS VGR ID+ R GY++L +L +F +EG L DP + W+++
Sbjct: 988 ANQTQRMRTYTKVQKCGS-VGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTEWKLV 1046
Query: 731 YTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
Y D END+++VGDDPW EF + V I I + EV+KM++
Sbjct: 1047 YVDHENDILLVGDDPWEEFVSCVQSIKILSSAEVQKMSL 1085
>gi|379323202|gb|AFD01300.1| auxin response factor 5-2 [Brassica rapa subsp. pekinensis]
Length = 836
Score = 339 bits (869), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 179/350 (51%), Positives = 238/350 (68%), Gaps = 15/350 (4%)
Query: 61 LWHACAGPLTSLPKKGNVVVYFPQGHLEQVA-SSSAFPPIEVPNF-DLQPQIFCKVVDVQ 118
LWHACAGPL LP+ G++V YF QGH EQVA S+ +VPN+ +L Q+ C+V +V
Sbjct: 43 LWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQVHNVT 102
Query: 119 LLANKENDEVYTQVALLP-QPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
L A+K++DE+Y Q++L P E + L + DLG+ G + P++ FCKTLT
Sbjct: 103 LHADKDSDEIYAQMSLQPVHSERDVL-----PVPDLGLLR--GSKHPSE----YFCKTLT 151
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLDY Q P+QELV +DLH W FRHIYRGQP+RHLL
Sbjct: 152 ASDTSTHGGFSVPRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLL 211
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FV K L +GD+VLF+R + +L +G+RR+ + + LP S+LS + + VL+
Sbjct: 212 TTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAA 271
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIM-NPICIGTRFKMRFEMDDSPERRC 356
A+A + ++ F +F++PRA A+FVIP KY K I + + +G RF M FE +DS +RR
Sbjct: 272 AAHATANRTPFLIFFNPRACPAEFVIPLPKYRKAICGSQLSVGMRFGMMFETEDSGKRRY 331
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSL 406
G + GI+DLDP RWP SKWR L V WDE +D +VSPW+I+ SL
Sbjct: 332 MGTIVGISDLDPLRWPGSKWRNLQVEWDEPGCNDKPTRVSPWDIETPESL 381
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 62/95 (65%), Gaps = 2/95 (2%)
Query: 675 SPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDP-AKGWRILYTD 733
+P R+ TKV K GS VGR+ID+ Y +L + +E +F +EGLL P GW+++Y D
Sbjct: 726 TPRVRTYTKVQKTGS-VGRSIDVTSFRDYEELKTAIECMFGLEGLLTRPKTSGWKLVYVD 784
Query: 734 SENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
E+DV++VGDDPW EF V I I + EV++M+
Sbjct: 785 YESDVLLVGDDPWEEFVGCVRCIRILSPTEVQQMS 819
>gi|15221978|ref|NP_173356.1| auxin response factor 19 [Arabidopsis thaliana]
gi|46576613|sp|Q8RYC8.2|ARFS_ARATH RecName: Full=Auxin response factor 19; AltName:
Full=Auxin-responsive protein IAA22
gi|37540154|gb|AAG35176.1| ARF11/IAA22 [Arabidopsis thaliana]
gi|49616363|gb|AAT67078.1| ARF19 [Arabidopsis thaliana]
gi|56961712|gb|AAB91321.2| early auxin-induced IAA22 [Arabidopsis thaliana]
gi|225897946|dbj|BAH30305.1| hypothetical protein [Arabidopsis thaliana]
gi|332191698|gb|AEE29819.1| auxin response factor 19 [Arabidopsis thaliana]
Length = 1086
Score = 338 bits (867), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 176/346 (50%), Positives = 229/346 (66%), Gaps = 11/346 (3%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNF-DLQPQIFCKVV 115
I +LWHACAGPL SLP G++VVYFPQGH EQVA+S +PN+ +L ++ C +
Sbjct: 20 INSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTDFIPNYPNLPSKLICLLH 79
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKT 175
V L A+ E DEVY Q+ L P + + EA D+G+ R PT+ FCKT
Sbjct: 80 SVTLHADTETDEVYAQMTLQP---VNKYDREALLASDMGLKLN---RQPTE----FFCKT 129
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
LTASDTSTHGGFSVPRRAAE FPPLD+ Q P+QE+VAKDLH W FRHIYRGQP+RH
Sbjct: 130 LTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRH 189
Query: 236 LLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVL 295
LLTTGWS+FVS K L +GD+VLF+R + +L LGIRR+ + L S++S + + +L
Sbjct: 190 LLTTGWSVFVSTKRLFAGDSVLFVRDEKSQLMLGIRRANRQTPTLSSSVISSDSMHIGIL 249
Query: 296 SVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERR 355
+ A+A + S F +F++PRA+ ++FV+P KY K + + +G RF+M FE +D RR
Sbjct: 250 AAAAHANANSSPFTIFFNPRASPSEFVVPLAKYNKALYAQVSLGMRFRMMFETEDCGVRR 309
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
G VTGI+DLDP RW S+WR L V WDE D +VS WEI+
Sbjct: 310 YMGTVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIE 355
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 69/98 (70%), Gaps = 2/98 (2%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDP-AKGWRILY 731
+Q+ R+ TKV K+GS VGR+ID+ R +GY++L +L +F +EG L DP W+++Y
Sbjct: 952 NQTQRMRTYTKVQKRGS-VGRSIDVTRYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVY 1010
Query: 732 TDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
TD END+++VGDDPW EF N V I I + EV++M++
Sbjct: 1011 TDHENDILLVGDDPWEEFVNCVQNIKILSSVEVQQMSL 1048
>gi|295844332|gb|ADG43163.1| auxin response factor 29 [Zea mays]
Length = 945
Score = 338 bits (866), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 170/347 (48%), Positives = 227/347 (65%), Gaps = 12/347 (3%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSA-FPPIEVPNF-DLQPQIFCKV 114
I ELWHACAGPL LP++G++V YFPQGH EQVA+++ P +PN+ L PQ+ C+V
Sbjct: 36 INSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPPQLLCQV 95
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
++ L A+KE DE+Y Q+ L P L+ E D+ G + +K FCK
Sbjct: 96 HNITLHADKETDEIYCQMTLQP------LHSET----DVFPIPTLGAYTKSKHPTEYFCK 145
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
LTASDTSTHGGFSVPRRAAE FP LDY Q P+QEL+ +DLH W FRHIYRGQP+R
Sbjct: 146 NLTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKR 205
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS+FV K L +GD+VLF+R + +L +G+RR+ + + L S+LS + + V
Sbjct: 206 HLLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGV 265
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
L+ A+A S+ F ++Y+PR + + FVIP +Y K +G RF M FE ++S +R
Sbjct: 266 LAAAAHAASSGGSFTIYYNPRTSPSPFVIPLARYNKATYLQPSVGMRFAMMFETEESSKR 325
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
RC G + GI+D DP RWPNSKWR L V WDE + E+VS W+I+
Sbjct: 326 RCTGAIVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIE 372
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 88/189 (46%), Gaps = 9/189 (4%)
Query: 595 SNLQRENVKLNSSSIQMPAIGAEIRKANLLNEHKPVENIPTPTFKANMRSHKDGSFNGTA 654
S L E + +NSSS P E P P + + S S + A
Sbjct: 765 SGLHMEAIHINSSSCSQPLATGSFDAGAFPKLSNIRECQPLPLQEIHTSSMGTPSCSMDA 824
Query: 655 AGCKLFGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLF 714
A +G +++ P R+ TKV K GS VGR ID+ R Y++L S + +F
Sbjct: 825 AA--EYGTDRSAK-----QMKPPVRTYTKVQKLGS-VGRCIDVTRFRDYHELRSAIACMF 876
Query: 715 NMEGLLRDPAKG-WRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGTTD 773
++G L P W+++Y D ENDV++VGDDPW EF N V I I + EV++M+
Sbjct: 877 GLQGKLEHPGSSDWKLVYVDYENDVLLVGDDPWEEFINCVRCIRILSPSEVQQMSENGVH 936
Query: 774 DTQSCLDQA 782
C+ A
Sbjct: 937 VLNDCIQIA 945
>gi|379323238|gb|AFD01318.1| auxin response factor 19-2 [Brassica rapa subsp. pekinensis]
Length = 1049
Score = 338 bits (866), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 189/407 (46%), Positives = 251/407 (61%), Gaps = 30/407 (7%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNF-DLQPQIFCKV 114
+I +LWHACAGPL SLP G++VVYFPQGH EQVA+S +PN+ +L ++ C +
Sbjct: 19 AINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTDFIPNYPNLPSKLICLL 78
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
V L A+ E DEVY Q+ L P + + EA D+G+ R PT+ FCK
Sbjct: 79 HSVTLHADTETDEVYAQMTLQP---VNKYDREALLASDMGLKIN---RQPTE----FFCK 128
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLTASDTSTHGGFSVPRRAAE FPPLD+ Q P+QE+VAKDLH W FRHIYRGQP+R
Sbjct: 129 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKR 188
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS+FVS K L +GD+VLF+R + +L LGIRR+ + L S++S + + +
Sbjct: 189 HLLTTGWSVFVSTKRLFAGDSVLFVRDEKSQLTLGIRRANRQTPTLSSSVISSDSMHIGI 248
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
L+ A+A + S F +F++PRA+ ++FV+P KY K + + +G RF+M FE +D R
Sbjct: 249 LAAAAHANANSSPFTIFFNPRASPSEFVVPLAKYNKALYAQVSLGMRFRMMFETEDCGVR 308
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSS 414
R G VTGI+DLDP RW S+WR L V WDE D +VS WEI+ ++ P I
Sbjct: 309 RYMGTVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIEPVIT--PFYICPP 366
Query: 415 PRMKKLRTGLQAPPPDYPVSARGGGV----LDFEESVRSSKVLQGQE 457
P + P YP R G+ LD E + + + G+E
Sbjct: 367 PFFR----------PKYP---RQPGMPDDELDMENAFKRAMPWMGEE 400
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 69/98 (70%), Gaps = 2/98 (2%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPA-KGWRILY 731
+Q+ R+ TKV K+GS VGR+ID+ R +GY +L ++L +F +EG L DP W+++Y
Sbjct: 915 NQAQRMRTYTKVQKRGS-VGRSIDVTRYSGYEELRNDLARMFGIEGQLEDPQISDWKLVY 973
Query: 732 TDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
TD END+++VGDDPW EF N V I I + EV++M++
Sbjct: 974 TDHENDILLVGDDPWEEFVNCVQNIKILSSAEVQQMSL 1011
>gi|449488115|ref|XP_004157943.1| PREDICTED: auxin response factor 19-like [Cucumis sativus]
Length = 1097
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 177/351 (50%), Positives = 235/351 (66%), Gaps = 11/351 (3%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNF-DLQPQIFCKV 114
+I ELWHACAGPL SLP G++VVYFPQGH EQVA+S +PN+ +L ++ C +
Sbjct: 19 NINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPSKLICML 78
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
+V L A+ E DEVY Q+ L P + E EA D+G+ + R P + FCK
Sbjct: 79 HNVTLHADPETDEVYAQMTLQPVNKYEK---EALLASDIGLKQ---SRQPAE----FFCK 128
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLTASDTSTHGGFSVPRRAAE FPPLDY Q P+QELVA+DLH W FRHIYRGQP+R
Sbjct: 129 TLTASDTSTHGGFSVPRRAAEKIFPPLDYSMQPPAQELVARDLHDNSWTFRHIYRGQPKR 188
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS+FVS K L +GD+VLF+R + +L LGIRR+ + + L S++S + + +
Sbjct: 189 HLLTTGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISSDSMHIGI 248
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
L+ A+A + S F +FY+PRA+ ++FVIP KY K + + +G RF+M FE ++S R
Sbjct: 249 LASAAHAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVR 308
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS 405
R G +TGI+D+D RW NS+WR L V WDE + +VS WE++ V+
Sbjct: 309 RYMGTITGISDMDSVRWKNSQWRNLQVGWDESAAGERPNRVSIWEVEPVVT 359
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 64/92 (69%), Gaps = 2/92 (2%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSEND 737
R+ TKV K+GS VGR ID+ R GY++L +L +F +EG L DP + W+++Y D END
Sbjct: 970 RTYTKVQKRGS-VGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDHEND 1028
Query: 738 VMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
+++VGDDPW EF + V I I + EV++M++
Sbjct: 1029 ILLVGDDPWDEFVSCVQSIKILSSAEVQQMSL 1060
>gi|47496692|dbj|BAD19061.1| auxin response factor 1 [Cucumis sativus]
Length = 1081
Score = 337 bits (865), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 177/351 (50%), Positives = 235/351 (66%), Gaps = 11/351 (3%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNF-DLQPQIFCKV 114
+I ELWHACAGPL SLP G++VVYFPQGH EQVA+S +PN+ +L ++ C +
Sbjct: 19 NINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPSKLICML 78
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
+V L A+ E DEVY Q+ L P + E EA D+G+ + R P + FCK
Sbjct: 79 HNVTLHADPETDEVYAQMTLQPVNKYEK---EALLASDIGLKQ---SRQPAE----FFCK 128
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLTASDTSTHGGFSVPRRAAE FPPLDY Q P+QELVA+DLH W FRHIYRGQP+R
Sbjct: 129 TLTASDTSTHGGFSVPRRAAEKIFPPLDYSMQPPAQELVARDLHDNSWTFRHIYRGQPKR 188
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS+FVS K L +GD+VLF+R + +L LGIRR+ + + L S++S + + +
Sbjct: 189 HLLTTGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISSDSMHIGI 248
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
L+ A+A + S F +FY+PRA+ ++FVIP KY K + + +G RF+M FE ++S R
Sbjct: 249 LASAAHAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVR 308
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS 405
R G +TGI+D+D RW NS+WR L V WDE + +VS WE++ V+
Sbjct: 309 RYMGTITGISDMDSVRWKNSQWRNLQVGWDESAAGERPNRVSIWEVEPVVT 359
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 64/92 (69%), Gaps = 2/92 (2%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSEND 737
R+ TKV K+GS VGR ID+ R GY++L +L +F +EG L DP + W+++Y D END
Sbjct: 970 RTYTKVQKRGS-VGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDHEND 1028
Query: 738 VMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
+++VGDDPW EF + V I I + EV++M++
Sbjct: 1029 ILLVGDDPWDEFVSCVQSIKILSSAEVQQMSL 1060
>gi|312283167|dbj|BAJ34449.1| unnamed protein product [Thellungiella halophila]
Length = 559
Score = 337 bits (864), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 168/355 (47%), Positives = 229/355 (64%), Gaps = 18/355 (5%)
Query: 50 SSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVA--SSSAFPPIEVPNFDLQ 107
S S +Y ELW ACAGPL +P+ G V YFPQGH+EQ+ ++ E+P+F+L
Sbjct: 11 SGSYDDQLYMELWKACAGPLVEVPRYGERVFYFPQGHMEQLVALTNQGVVDQEIPDFNLP 70
Query: 108 PQIFCKVVDVQLLANKENDEVYTQVALLPQPEL-EGLNLEAKQLEDLGVDEEGGGRSPTK 166
P+I C+V+ V L A E DEVY Q+ L P+ + E +L+ +E P K
Sbjct: 71 PKILCRVLSVMLKAEHETDEVYAQITLQPEEDQSEPTSLDPPLVE------------PAK 118
Query: 167 STPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRH 226
+ F K LTASDTSTHGGFSV R+ A +C P LD +Q +QELVA+DLHG EWRF+H
Sbjct: 119 QSVDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMRQPTQTQELVARDLHGYEWRFKH 178
Query: 227 IYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILS 286
I+RGQPRRHLLTTGWS FV+ K LV+GDA +FLRG+ G+LR+G+RR + ++ +P S++S
Sbjct: 179 IFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGQTGDLRVGVRRLARQQSTMPASVIS 238
Query: 287 KQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRF 346
Q+ + VL+ ++AV+TK++F VFY PR + F+I KY+ + IG RF+MRF
Sbjct: 239 SQSMHLGVLATASHAVNTKTLFVVFYKPRISQ--FIIGVNKYMAAMKIGFPIGMRFRMRF 296
Query: 347 EMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
E ++SPER G + G DL +WP SKWR L ++WDE +VS WEI+
Sbjct: 297 EGEESPERIFTGTIVGTGDLS-SQWPASKWRSLQIQWDEPSTVQRPNKVSTWEIE 350
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 57/115 (49%), Gaps = 31/115 (26%)
Query: 657 CKLFGFSLTSE----TPTP--------------------------SSQSPGKRSCTKVHK 686
C+LFGF L S+ P P Q RS TKV K
Sbjct: 446 CRLFGFDLMSKPASTAPVPPDKLLISVDSNNSGSAKCQDPNSLTEQKQQTSTRSRTKVQK 505
Query: 687 QGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVV 741
QG+ VGRA+DL L Y++L++ELE +F ++G L P W I++TD E D+M+V
Sbjct: 506 QGTAVGRAVDLTLLRSYDELINELEKMFEIDGEL-SPKDKWAIVFTDDEGDMMLV 559
>gi|357479369|ref|XP_003609970.1| Auxin response factor [Medicago truncatula]
gi|355511025|gb|AES92167.1| Auxin response factor [Medicago truncatula]
Length = 1120
Score = 337 bits (863), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 174/351 (49%), Positives = 236/351 (67%), Gaps = 11/351 (3%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNF-DLQPQIFCKV 114
+I ELWHACAGPL SLP G++VVYFPQGH EQVA+S +P++ +L ++ C +
Sbjct: 19 TINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTDFIPSYPNLPSKLICML 78
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
+V L A+ E DEVY Q+ L P + + +A D G+ + R PT+ FCK
Sbjct: 79 HNVALHADPETDEVYAQMTLQP---VNKYDKDAILASDFGLKQ---NRQPTE----FFCK 128
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLTASDTSTHGGFSVPRRAAE FPPLD+ Q P+QELVAKDLH W FRHIYRGQP+R
Sbjct: 129 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNTWAFRHIYRGQPKR 188
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS+F+S K L +GD+VLF+R + +L LG+RR+ + + L S++S + + +
Sbjct: 189 HLLTTGWSVFISTKRLFAGDSVLFIRDEKQQLLLGLRRANRQQPALSSSVISSDSMHIGI 248
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
L+ A+A + S F ++Y+PRA+ ++FV+P KY K + + +G RF+M FE ++S R
Sbjct: 249 LAAAAHAAANNSPFTIYYNPRASPSEFVVPLAKYNKAMYTQVSLGMRFRMMFETEESGVR 308
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS 405
R G VTGI+DLDP RW NS+WR L V WDE + +VS W+I+ V+
Sbjct: 309 RYMGTVTGISDLDPVRWKNSQWRNLQVGWDESTAGERPSRVSIWDIEPVVT 359
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 68/99 (68%), Gaps = 2/99 (2%)
Query: 672 SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRIL 730
++Q+ R+ TKV K+GS VGR ID+ R GY++L +L +F +EG L DP + W+++
Sbjct: 986 ANQNQRMRTYTKVQKRGS-VGRCIDVTRYKGYDELRYDLARMFGIEGQLEDPQRTDWKLV 1044
Query: 731 YTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
Y D END+++VGDDPW EF + V I I + EV++M++
Sbjct: 1045 YVDHENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMSL 1083
>gi|449522288|ref|XP_004168159.1| PREDICTED: uncharacterized LOC101205542 [Cucumis sativus]
Length = 1107
Score = 336 bits (862), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 181/345 (52%), Positives = 229/345 (66%), Gaps = 13/345 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASS-SAFPPIEVPNF-DLQPQIFCKVVDV 117
ELW ACAGPL +LP G VVYFPQGH EQVA+S +VPN+ L ++ C + +V
Sbjct: 30 ELWQACAGPLVNLPPAGYHVVYFPQGHSEQVAASLRKDVDGQVPNYPSLASKLLCLLHNV 89
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
L A+ E DEVY Q+ LLP P + +A DL + K P FCKTLT
Sbjct: 90 TLHADPETDEVYAQMTLLPVPSFDK---DALLRSDLALKS-------NKPQPEFFCKTLT 139
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ Q P+QELVAKDLH W FRHIYRGQP+RHLL
Sbjct: 140 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGQPKRHLL 199
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K L++GD+VLF+R + +L LGIRR+ + L S+LS + + +L+
Sbjct: 200 TTGWSLFVSGKRLLAGDSVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAA 259
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKII-MNPICIGTRFKMRFEMDDSPERRC 356
A+A + S F VFY+PRA+ ++FVIP KY K + N I +G RF+M FE ++S RR
Sbjct: 260 AAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKAVSANQISLGMRFRMMFETEESGTRRY 319
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
G +TGI+DLDP RW S+WR L V WDE G + + +VS WEI+
Sbjct: 320 MGTITGISDLDPVRWKGSQWRNLQVGWDESTGGERRNRVSVWEIE 364
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 67/92 (72%), Gaps = 2/92 (2%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSEND 737
R+ TKV+K+G+ VGR+ID+ R +GY++L +L F +EG L D K GW+++Y D END
Sbjct: 995 RTYTKVYKRGA-VGRSIDIARYSGYDELKQDLARRFGIEGQLEDRQKIGWKLVYVDHEND 1053
Query: 738 VMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
V++VGDDPW +F N V I I + +EV++M++
Sbjct: 1054 VLLVGDDPWDDFVNCVRSIKILSPQEVQQMSL 1085
>gi|255540071|ref|XP_002511100.1| Auxin response factor, putative [Ricinus communis]
gi|223550215|gb|EEF51702.1| Auxin response factor, putative [Ricinus communis]
Length = 844
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 176/413 (42%), Positives = 259/413 (62%), Gaps = 22/413 (5%)
Query: 49 SSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQ 107
S+ ++Y ELW+ACAGPL ++P++ +V YFPQGH+EQV AS++ ++P ++L
Sbjct: 44 SAKDAEKALYTELWNACAGPLVTVPRENELVYYFPQGHIEQVEASTNQLADQQMPVYNLP 103
Query: 108 PQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKS 167
+I C+V++VQL A + DEV+ QV LLP+P ++ N V ++ P +
Sbjct: 104 SKILCRVINVQLKAEPDTDEVFAQVTLLPEP-IQDEN---------AVKKDPPQPPPPRF 153
Query: 168 TPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHI 227
H FCKTLTASDTSTHGGFSV RR A++C PPL S E V + + +
Sbjct: 154 HVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLVSIN---STEFVRCLIDII-----ML 205
Query: 228 YRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSK 287
GQPRRHLL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++ + +P S++S
Sbjct: 206 IPGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQQGNVPSSVISS 265
Query: 288 QNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFE 347
+ + VL+ +A+ST ++F V+Y PR + A+F++P+ +Y++ + N CIG RFKMRFE
Sbjct: 266 HSMHLGVLATAWHAISTGTLFTVYYKPRTSPAEFIVPFDRYMESVKNNYCIGMRFKMRFE 325
Query: 348 MDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
+++PE+R G + GI D D RW SKWR L VRWDE ++VSPW ++ +++ P
Sbjct: 326 GEEAPEQRFTGTIVGIEDADSKRWRESKWRSLKVRWDETSTIPRPDRVSPWSVEPALAPP 385
Query: 408 PLSIQSSPRMKKLRTGLQAPPPDYPVSARGGG---VLDFEESVRSSKVLQGQE 457
L+ PR K+ R+ + PD V R G +D S+VLQGQE
Sbjct: 386 ALNPLPVPRPKRPRSNMVPSSPDSSVLTRDGSSKVTIDPPPPSGYSRVLQGQE 438
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 55/99 (55%), Positives = 71/99 (71%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYT 732
+Q+ RSCTKVHKQG +GR++DL + N Y++L++EL+ LF G L P K W I+YT
Sbjct: 712 TQTGSTRSCTKVHKQGIALGRSVDLAKFNNYDELIAELDRLFEFGGELISPKKNWLIVYT 771
Query: 733 DSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGT 771
D E D+M+VGDDPW EF V KI IYT+EEV+KM GT
Sbjct: 772 DDEGDMMLVGDDPWQEFVGMVRKIFIYTREEVQKMNPGT 810
>gi|379323236|gb|AFD01317.1| auxin response factor 19-1 [Brassica rapa subsp. pekinensis]
Length = 1020
Score = 336 bits (861), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 176/355 (49%), Positives = 232/355 (65%), Gaps = 11/355 (3%)
Query: 48 SSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNF-DL 106
SS+ I +LWHACAGPL SLP G++VVYFPQGH EQVA+S +PN+ +L
Sbjct: 11 SSAEGEKKPINSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTDFIPNYPNL 70
Query: 107 QPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTK 166
++ C + V L A+ E DEVY Q+ L P + + EA D+G+ R PT+
Sbjct: 71 PSKLICLLHSVTLHADTETDEVYAQMTLQP---VNKYDREALLASDMGLKLN---RQPTE 124
Query: 167 STPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRH 226
FCKTLTASDTSTHGGFSVPRRAAE FPPLD+ Q P+QE+VAKDLH W FRH
Sbjct: 125 ----FFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRH 180
Query: 227 IYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILS 286
IYRGQP+RHLLTTGWS+FVS K L++GD+VLF+R + +L L IRR+ + L S++S
Sbjct: 181 IYRGQPKRHLLTTGWSVFVSTKRLIAGDSVLFVRDEKSQLTLVIRRANRQTPTLSSSVIS 240
Query: 287 KQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRF 346
+ + +L+ A+A + S F +F++PRA+ ++FV+P KY K + + +G RF+M F
Sbjct: 241 SDSMHIGILAAAAHANANNSPFTIFFNPRASPSEFVVPLAKYNKALYAQVSLGMRFRMMF 300
Query: 347 EMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
E +D RR G VTG++DLDP RW S+WR L V WDE D +VS WEI+
Sbjct: 301 ETEDCGVRRYMGTVTGVSDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSVWEIE 355
Score = 99.8 bits (247), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 70/98 (71%), Gaps = 2/98 (2%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDP-AKGWRILY 731
+Q+ R+ TKV K+GS VGR+ID+ R +GY++L ++L +F +EG L DP W+++Y
Sbjct: 886 NQAQRMRTYTKVQKRGS-VGRSIDVTRYSGYDELRNDLARMFGIEGQLEDPRPSDWKLVY 944
Query: 732 TDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
TD END+++VGDDPW EF N V I I + EV++M++
Sbjct: 945 TDHENDILLVGDDPWEEFVNCVQNIKILSSVEVQQMSL 982
>gi|132449787|gb|ABO33637.1| auxin response factor, partial [Solanum lycopersicum]
Length = 1123
Score = 335 bits (860), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 171/347 (49%), Positives = 235/347 (67%), Gaps = 11/347 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNF-DLQPQIFCKVVDVQ 118
ELWHACAGPL SLP G++VVYFPQGH EQVA+S +P++ +L ++ C + +V
Sbjct: 9 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKETDGIPSYPNLPSKLICMLHNVT 68
Query: 119 LLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTA 178
L A+ E DEVY Q+ L P + + EA L ++G+ + R P + FCKTLTA
Sbjct: 69 LHADTETDEVYAQMTLQP---VNKYDQEALLLSEMGLKQ---NRQPAE----FFCKTLTA 118
Query: 179 SDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLT 238
SDTSTHGGFSVPRRAAE FPPLDY Q P+QEL+A+DLH W FRHIYRGQP+RHLLT
Sbjct: 119 SDTSTHGGFSVPRRAAEKIFPPLDYAMQPPAQELMARDLHDQTWTFRHIYRGQPKRHLLT 178
Query: 239 TGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVV 298
TGWS+F+S K L +GD+VLF+R + +L LGI+R+ + + L S++S + + +L+
Sbjct: 179 TGWSVFISSKRLCAGDSVLFIRDEKSQLLLGIKRTNRQQPALSSSVISSDSMHIGILAAA 238
Query: 299 ANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCNG 358
A+A + S F +FY+PRA+ ++FVIP KY K + + +G RF+M FE ++S RR G
Sbjct: 239 AHAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMYAQVSLGMRFRMMFETEESGVRRYMG 298
Query: 359 VVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS 405
+TG++DLDP RW +S+WR L V WDE + +VS W+I+ V+
Sbjct: 299 TITGVSDLDPIRWKSSQWRNLQVGWDESTAGERPSRVSIWDIEPVVT 345
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 100/202 (49%), Gaps = 46/202 (22%)
Query: 569 ESLSNMFFPYGDMPKTVQHHTMPPYASNLQRENVKLNSSSIQMPAIGAEIRKANLLNEHK 628
+ + N+F P+G+ P+ ++ + + +NS +P + + R AN
Sbjct: 931 KDIQNLFSPFGNAPRDIE----------TELSDAGINSQQFGVPNMSYKPRCAN------ 974
Query: 629 PVENIPTPTFKANMRSHKDGSFNGTAAGCKLFGFSLTSETPTPSSQSPGKRSCTKVHKQG 688
++ + +G N A ++Q+ R+ TKV K+G
Sbjct: 975 ------------DLAVNDNGILNNNAW----------------TNQTQRMRTYTKVQKRG 1006
Query: 689 SLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKG-WRILYTDSENDVMVVGDDPWH 747
S VGR ID+ R GY++L +L +F +EG L DP + W+++Y D END+++VGDDPW
Sbjct: 1007 S-VGRTIDVTRYIGYDELRHDLARMFGIEGQLEDPQRTEWKLVYVDHENDILLVGDDPWE 1065
Query: 748 EFCNEVSKIHIYTQEEVEKMTI 769
EF + V I I + EV++M++
Sbjct: 1066 EFVSCVQSIKILSCAEVQQMSL 1087
>gi|115464877|ref|NP_001056038.1| Os05g0515400 [Oryza sativa Japonica Group]
gi|113579589|dbj|BAF17952.1| Os05g0515400 [Oryza sativa Japonica Group]
Length = 587
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 180/362 (49%), Positives = 234/362 (64%), Gaps = 8/362 (2%)
Query: 169 PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIY 228
PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYK RPSQEL+A DLHG +W+FRHIY
Sbjct: 30 PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKTVRPSQELIAVDLHGTQWKFRHIY 89
Query: 229 RGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQ 288
RGQPRRHLLT GWS FV++K LVSGDAVLFLRG DG+LRLG+RR+VQ RN ++
Sbjct: 90 RGQPRRHLLTIGWSSFVNRKKLVSGDAVLFLRGDDGQLRLGVRRAVQLRNEALFEPVNSS 149
Query: 289 NSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEM 348
+S +LS VA+++ KS+FH+ ++PR+ ++F++PY + +K + +P IG RF++ +E
Sbjct: 150 DSKLRILSSVASSLENKSVFHICFNPRSGASEFIVPYWRLLKSLNHPFSIGMRFRVCYES 209
Query: 349 DDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPP 408
+D+ ER G+++GI+++DP RWP S+W+CL+VRWD+ S HQ +VSPWEI+R
Sbjct: 210 EDANERSA-GLISGISEVDPIRWPGSRWKCLLVRWDDSTDSSHQNRVSPWEIERVGG--S 266
Query: 409 LSIQSSPRMKKLRTGLQAPPP--DYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLY 466
+S+ S RT L P D P G G D + +VLQGQE G S
Sbjct: 267 VSVTHSLSSGSKRTKLHFPQGSLDTPF-LNGNGHPDSMGTENFHRVLQGQEFRGSRSHGV 325
Query: 467 GCDTVNHPLGFEMRAPAHQSLALNGIRKDNINELVRALPTSY--TGFVESNRFPKVLQGQ 524
C F+ S + G R +Y GF ES FP+VLQGQ
Sbjct: 326 VCSESPGVPNFQSPDNRRFSADMRGYMMPASGPPQRNTEFTYQPIGFSESLGFPEVLQGQ 385
Query: 525 EI 526
E+
Sbjct: 386 EM 387
>gi|222632222|gb|EEE64354.1| hypothetical protein OsJ_19194 [Oryza sativa Japonica Group]
Length = 588
Score = 335 bits (859), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 180/362 (49%), Positives = 234/362 (64%), Gaps = 8/362 (2%)
Query: 169 PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIY 228
PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYK RPSQEL+A DLHG +W+FRHIY
Sbjct: 31 PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKTVRPSQELIAVDLHGTQWKFRHIY 90
Query: 229 RGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQ 288
RGQPRRHLLT GWS FV++K LVSGDAVLFLRG DG+LRLG+RR+VQ RN ++
Sbjct: 91 RGQPRRHLLTIGWSSFVNRKKLVSGDAVLFLRGDDGQLRLGVRRAVQLRNEALFEPVNSS 150
Query: 289 NSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEM 348
+S +LS VA+++ KS+FH+ ++PR+ ++F++PY + +K + +P IG RF++ +E
Sbjct: 151 DSKLRILSSVASSLENKSVFHICFNPRSGASEFIVPYWRLLKSLNHPFSIGMRFRVCYES 210
Query: 349 DDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPP 408
+D+ ER G+++GI+++DP RWP S+W+CL+VRWD+ S HQ +VSPWEI+R
Sbjct: 211 EDANERSA-GLISGISEVDPIRWPGSRWKCLLVRWDDSTDSSHQNRVSPWEIERVGG--S 267
Query: 409 LSIQSSPRMKKLRTGLQAPPP--DYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLY 466
+S+ S RT L P D P G G D + +VLQGQE G S
Sbjct: 268 VSVTHSLSSGSKRTKLHFPQGSLDTPF-LNGNGHPDSMGTENFHRVLQGQEFRGSRSHGV 326
Query: 467 GCDTVNHPLGFEMRAPAHQSLALNGIRKDNINELVRALPTSY--TGFVESNRFPKVLQGQ 524
C F+ S + G R +Y GF ES FP+VLQGQ
Sbjct: 327 VCSESPGVPNFQSPDNRRFSADMRGYMMPASGPPQRNTEFTYQPIGFSESLGFPEVLQGQ 386
Query: 525 EI 526
E+
Sbjct: 387 EM 388
>gi|356565674|ref|XP_003551063.1| PREDICTED: uncharacterized protein LOC100816054 [Glycine max]
Length = 1136
Score = 335 bits (858), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 175/347 (50%), Positives = 232/347 (66%), Gaps = 11/347 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNF-DLQPQIFCKVVDVQ 118
ELWHACAGPL SLP G++VVYFPQGH EQVA+S +P++ +L ++ C + +V
Sbjct: 23 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKEADFIPSYPNLPSKLICMLHNVA 82
Query: 119 LLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTA 178
L A+ E DEVY Q+ L P + E EA D+G+ + R PT+ FCKTLTA
Sbjct: 83 LHADPETDEVYAQMTLQPVNKYEK---EAILASDIGLKQN---RQPTE----FFCKTLTA 132
Query: 179 SDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLT 238
SDTSTHGGFSVPRRAAE PPLDY Q P+QELVAKDLH W FRHIYRGQP+RHLLT
Sbjct: 133 SDTSTHGGFSVPRRAAEKILPPLDYSMQPPAQELVAKDLHDNTWAFRHIYRGQPKRHLLT 192
Query: 239 TGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVV 298
TGWS+FVS K L +GD+VLF+R + L LGIRR+ + + L S++S + + +L+
Sbjct: 193 TGWSVFVSTKRLFAGDSVLFIRDEKQHLLLGIRRANRQQPALSSSVISSDSMHIGILAAA 252
Query: 299 ANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCNG 358
A+A + S F +FY+PRA+ ++FV+P KY K + + +G RF+M FE ++S R G
Sbjct: 253 AHAAANNSPFTIFYNPRASPSEFVVPLAKYNKAMYTQVSLGMRFRMMFETEESGVRGYMG 312
Query: 359 VVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS 405
+TGI+DLDP RW +S+WR + V WDE + +VS WEI+ V+
Sbjct: 313 TITGISDLDPVRWKSSQWRNIQVGWDESTAGERPRRVSIWEIEPVVT 359
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 69/99 (69%), Gaps = 2/99 (2%)
Query: 672 SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRIL 730
++Q+P R+ TKV K+GS VGR ID+ R GY++L +L +F +EG L DP + W+++
Sbjct: 1001 TNQTPRMRTYTKVQKRGS-VGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPLRTDWKLV 1059
Query: 731 YTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
Y D END+++VGDDPW EF + V I I + EV++M++
Sbjct: 1060 YVDHENDILLVGDDPWDEFVSCVQSIKILSSAEVQQMSL 1098
>gi|350539809|ref|NP_001234534.1| auxin response factor 9 [Solanum lycopersicum]
gi|296245060|gb|ADH03013.1| auxin response factor 9 [Solanum lycopersicum]
Length = 644
Score = 334 bits (857), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 167/346 (48%), Positives = 236/346 (68%), Gaps = 14/346 (4%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQ-VASSSAFPPIEVPNFDLQPQIFCKV 114
++Y ELW CAGP+ +P++G V YFPQGH+EQ VAS + VP+F+L+ ++ C+V
Sbjct: 9 ALYHELWQLCAGPVVDVPREGERVYYFPQGHMEQLVASINQEMDQRVPSFNLKSKVLCRV 68
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
++ LA ++NDEVY Q+ L+P E ++ D + ++ K H FCK
Sbjct: 69 INSHFLAEEDNDEVYVQITLMP----EAPHVPEPTTPDPLIPQD------VKPRFHSFCK 118
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
LTASDTSTHGGFSV R+ A +C PPLD QQ P+QEL+AKDLH VEWRF+HI+RGQPRR
Sbjct: 119 VLTASDTSTHGGFSVLRKHANECLPPLDLNQQTPTQELIAKDLHDVEWRFKHIFRGQPRR 178
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS FVS K LV+GD+ +FLRG +G+LR+G++R V+ ++ +P S++S Q+ + V
Sbjct: 179 HLLTTGWSTFVSSKKLVAGDSFVFLRGNNGQLRVGVKRLVRQQSSMPSSVMSSQSMHLGV 238
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
L+ ++AV+T++MF V+Y PR T F++ KY++ + + +G RFKM+FE + +P+R
Sbjct: 239 LATASHAVTTQTMFVVYYKPRTTQ--FIVGVNKYLEALKHEYAVGMRFKMQFEAEGNPDR 296
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEI 400
R G + GI DL +W NS WR L VRWDE ++VSPWEI
Sbjct: 297 RFMGTIVGIDDLSS-QWKNSAWRSLKVRWDEPAAIARPDRVSPWEI 341
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 49/102 (48%), Positives = 67/102 (65%), Gaps = 1/102 (0%)
Query: 672 SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILY 731
S QS RS TKV QG VGRA+DL L GY++L ELE +F ++G L+ K W IL+
Sbjct: 543 SKQSCSTRSRTKVQMQGVAVGRAVDLTILKGYDELTKELEEMFEIQGELQSRQK-WGILF 601
Query: 732 TDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGTTD 773
TD E D M++GD PW +FCN V KI I + ++++K+T+ D
Sbjct: 602 TDDEGDTMLMGDYPWQDFCNVVRKIFICSSQDMKKLTLSRAD 643
>gi|297603514|ref|NP_001054169.2| Os04g0664400 [Oryza sativa Japonica Group]
gi|75248068|sp|Q8S983.1|ARFK_ORYSJ RecName: Full=Auxin response factor 11; AltName: Full=OsARF5;
AltName: Full=OsMP; AltName: Full=Protein
MONOPTEROS-like
gi|158563897|sp|Q01K26.2|ARFK_ORYSI RecName: Full=Auxin response factor 11; AltName: Full=OsARF5;
AltName: Full=OsMP; AltName: Full=Protein
MONOPTEROS-like
gi|19352037|dbj|BAB85912.1| Arabidopsis Monopteros-like protein [Oryza sativa]
gi|255675857|dbj|BAF16083.2| Os04g0664400 [Oryza sativa Japonica Group]
Length = 955
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 171/347 (49%), Positives = 227/347 (65%), Gaps = 12/347 (3%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSS-AFPPIEVPNF-DLQPQIFCKV 114
I ELWHACAGPL LP++G++V YFPQGH EQVA+++ P +PN+ +L Q+ C+V
Sbjct: 36 INSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTRKIPNSRIPNYPNLPSQLLCQV 95
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
++ L A+K+ DEVY Q+ L P +N E D+ G + +K FCK
Sbjct: 96 HNITLHADKDTDEVYAQMTLQP------VNSET----DVFPIPTLGAYTKSKHPTEYFCK 145
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
LTASDTSTHGGFSVPRRAAE FP LDY Q P+QEL+ +DLH W FRHIYRGQP+R
Sbjct: 146 NLTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKR 205
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS+FV K L +GD+VLF+R + +L LG+RR+ + + L S+LS + + V
Sbjct: 206 HLLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLLGVRRATRQQTMLSSSVLSTDSMHIGV 265
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
L+ A+A S+ S F ++Y+PR + + FVIP +Y K +G RF M FE ++S +R
Sbjct: 266 LAAAAHAASSGSSFTIYYNPRTSPSPFVIPVARYNKATYMQPSVGMRFAMMFETEESSKR 325
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
R G V GI+D DP RWPNSKWR L V WDE + E+VS W+I+
Sbjct: 326 RYTGTVVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIE 372
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Query: 676 PGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKG-WRILYTDS 734
P R+ TKV KQGS VGR+ID+ Y++L S + +F ++G L P W+++Y D
Sbjct: 849 PPVRTYTKVQKQGS-VGRSIDVTGFRNYHELRSAIACMFGLQGKLEHPGSSEWKLVYVDY 907
Query: 735 ENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGTTDDTQSCLDQA 782
ENDV++VGDDPW EF N V I I + EV++M+ C+ A
Sbjct: 908 ENDVLLVGDDPWEEFINCVRCIRILSPSEVQQMSENGMHVLNDCIQAA 955
>gi|357162522|ref|XP_003579438.1| PREDICTED: auxin response factor 11-like [Brachypodium distachyon]
Length = 955
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 169/347 (48%), Positives = 228/347 (65%), Gaps = 12/347 (3%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSS-AFPPIEVPNF-DLQPQIFCKV 114
I ELWHACAGPL LP++G++V YFPQGH EQVA+++ P +PN+ +L Q+ C+V
Sbjct: 37 INSELWHACAGPLVFLPQRGSLVYYFPQGHSEQVAATTRKVPNSRIPNYPNLPSQLLCQV 96
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
++ + A+KE DEVY Q+ L P +N E D+ G + +K P FCK
Sbjct: 97 HNITMHADKETDEVYAQMTLQP------VNSET----DVFPIPALGSYAKSKHPPEYFCK 146
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
LTASDTSTHGGFSVPRRAAE FP LDY Q P+QEL+ +DLH W FRHIYRGQP+R
Sbjct: 147 NLTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKR 206
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS+FV K L +GD+VLF+R + +L LG+RR+ + + L S+LS + + V
Sbjct: 207 HLLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLLGVRRATRQQTQLSSSVLSTDSMHIGV 266
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
L+ A+A S+ S F ++Y+PR + + FV+P +Y K +G RF M FE ++S +R
Sbjct: 267 LAAAAHAASSGSSFTIYYNPRTSPSPFVVPLARYNKANYVQQSVGMRFAMMFETEESSKR 326
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
R G + G++D DP RWPNSKWR L V WDE + E+VS W+I+
Sbjct: 327 RYTGTIVGVSDYDPIRWPNSKWRNLQVEWDEHGYGERPERVSIWDIE 373
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 60/94 (63%), Gaps = 2/94 (2%)
Query: 676 PGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKG-WRILYTDS 734
P R+ TKV K GS VGR+ID+ R Y +L S + +F ++G L P W+++Y D
Sbjct: 848 PPVRTYTKVQKLGS-VGRSIDVTRYRDYRELRSAIASMFGLQGKLEHPGSSEWKLVYVDY 906
Query: 735 ENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
ENDV++VGDDPW EF N V I I + EV++M+
Sbjct: 907 ENDVLLVGDDPWEEFINCVRCIRILSPSEVQQMS 940
>gi|242077548|ref|XP_002448710.1| hypothetical protein SORBIDRAFT_06g031900 [Sorghum bicolor]
gi|241939893|gb|EES13038.1| hypothetical protein SORBIDRAFT_06g031900 [Sorghum bicolor]
Length = 946
Score = 334 bits (856), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 167/347 (48%), Positives = 223/347 (64%), Gaps = 12/347 (3%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSA-FPPIEVPNF-DLQPQIFCKV 114
I ELWHACAGPL LP++G++V YFPQGH EQVA+++ P +PN+ L Q+ C+V
Sbjct: 36 INSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPSQLLCQV 95
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
++ L A+KE DE+Y Q+ L P D+ G + +K FCK
Sbjct: 96 HNITLHADKETDEIYAQMTLQP----------VHSETDVFPIPSLGAYTKSKHPTEYFCK 145
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
LTASDTSTHGGFSVPRRAAE FP LDY Q P+QEL+ +DLH W FRHIYRGQP+R
Sbjct: 146 NLTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKR 205
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS+FV K L +GD+VLF+R + +L +G+RR+ + + L S+LS + + V
Sbjct: 206 HLLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGV 265
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
L+ A+A S+ F ++Y+PR + + FVIP +Y K +G RF M FE ++S +R
Sbjct: 266 LAAAAHAASSGGSFTIYYNPRTSPSPFVIPLARYNKATYLQPSVGMRFAMMFETEESIKR 325
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
RC G + GI+D DP RWPNSKWR L V WDE + E+VS W+I+
Sbjct: 326 RCTGTIVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSLWDIE 372
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 97/190 (51%), Gaps = 12/190 (6%)
Query: 595 SNLQRENVKLNSSSIQMPAIGA-EIRKANLLNEHKPVENIPTPTFKANMRSHKDGSFNGT 653
S L E + +NSS Q A G+ + + L+ K + +P ++ +GS GT
Sbjct: 767 SGLHMEAIHINSSCSQPLATGSFDAGTFSKLSNMKECQALP-------LQEIHNGSM-GT 818
Query: 654 AAGCKLFGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHL 713
+ C + + S + P R+ TKV K GS VGR+ID+ R Y++L S + +
Sbjct: 819 PS-CSMDAAAEYSMDRSVKPMKPPVRTYTKVQKLGS-VGRSIDVTRFRDYHELRSAIACM 876
Query: 714 FNMEGLLRDPA-KGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGTT 772
F ++G L P W+++Y D ENDV++VGDDPW EF N V I I + EV++M+
Sbjct: 877 FGLQGKLEHPGGSDWKLVYVDYENDVLLVGDDPWEEFINCVRCIRILSPSEVQQMSENGV 936
Query: 773 DDTQSCLDQA 782
C+ A
Sbjct: 937 HVLNDCIQIA 946
>gi|47496694|dbj|BAD19062.1| auxin response factor 2 [Cucumis sativus]
Length = 1107
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 180/345 (52%), Positives = 229/345 (66%), Gaps = 13/345 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASS-SAFPPIEVPNF-DLQPQIFCKVVDV 117
ELW ACAGPL +LP G VVYFPQGH EQVA+S +VPN+ L ++ C + +V
Sbjct: 30 ELWQACAGPLVNLPPAGYHVVYFPQGHSEQVAASLRKDVDGQVPNYPSLASKLLCLLHNV 89
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
L A+ E DEVY Q+ LLP + + +A DL + K P FCKTLT
Sbjct: 90 TLHADPETDEVYAQMTLLP---VLSFDKDALLRSDLALKS-------NKPQPEFFCKTLT 139
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ Q P+QELVAKDLH W FRHIYRGQP+RHLL
Sbjct: 140 ASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGQPKRHLL 199
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K L++GD+VLF+R + +L LGIRR+ + L S+LS + + +L+
Sbjct: 200 TTGWSLFVSGKRLLAGDSVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAA 259
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKII-MNPICIGTRFKMRFEMDDSPERRC 356
A+A + S F VFY+PRA+ ++FVIP KY K + N I +G RF+M FE ++S RR
Sbjct: 260 AAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKAVSANQISLGMRFRMMFETEESGTRRY 319
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
G +TGI+DLDP RW S+WR L V WDE G + + +VS WEI+
Sbjct: 320 MGTITGISDLDPVRWKGSQWRNLQVGWDESTGGERRNRVSVWEIE 364
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 67/92 (72%), Gaps = 2/92 (2%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSEND 737
R+ TKV+K+G+ VGR+ID+ R +GY++L +L F +EG L D K GW+++Y D END
Sbjct: 995 RTYTKVYKRGA-VGRSIDIARYSGYDELKQDLARRFGIEGQLEDRQKIGWKLVYVDHEND 1053
Query: 738 VMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
V++VGDDPW +F N V I I + +EV++M++
Sbjct: 1054 VLLVGDDPWDDFVNCVRSIKILSPQEVQQMSL 1085
>gi|222636179|gb|EEE66311.1| hypothetical protein OsJ_22545 [Oryza sativa Japonica Group]
Length = 1138
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 177/364 (48%), Positives = 237/364 (65%), Gaps = 17/364 (4%)
Query: 41 SSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASS-SAFPPI 99
S C + + +++S ELWHACAGPL SLP G++VVYFPQGH EQVA+S
Sbjct: 12 SGCEGEKTKAPAINS----ELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDA 67
Query: 100 EVPNF-DLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEE 158
VP++ +L ++ C + +V L A+ E DEVY Q+ L P + EA QL +L + +
Sbjct: 68 HVPSYPNLPSKLICLLHNVTLHADPETDEVYAQMTLQP---VTSYGKEALQLSELALKQ- 123
Query: 159 GGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLH 218
+ FCKTLTASDTSTHGGFSVPRRAAE FPPLD+ Q P+QEL A+DLH
Sbjct: 124 ------ARPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDLH 177
Query: 219 GVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRN 278
W FRHIYRGQP+RHLLTTGWS+FVS K L +GD+V+F+R + +L LGIRR+ +
Sbjct: 178 DNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIFVRDEKQQLLLGIRRANRQPT 237
Query: 279 GLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIM-NPIC 337
+ S+LS + + +L+ A+A + S F +FY+PRA+ +FVIP+ KY K + N I
Sbjct: 238 NISSSVLSSDSMHIGILAAAAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQIS 297
Query: 338 IGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSP 397
+G RF+M FE ++ RR G +TGI+DLDP RW NS+WR L V WDE + + +VS
Sbjct: 298 LGMRFRMMFETEELGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSI 357
Query: 398 WEID 401
WEI+
Sbjct: 358 WEIE 361
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 80/128 (62%), Gaps = 3/128 (2%)
Query: 647 DGSFNGTAAGCKLFGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDL 706
D +FN + GF S P P++ R+ TKV+K+G+ VGR+ID+ + +GY++L
Sbjct: 973 DMAFNSIDSTINDGGFLNRSSWP-PAAPLKRMRTFTKVYKRGA-VGRSIDMSQFSGYDEL 1030
Query: 707 LSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVE 765
L +F++EG L + + GW+++Y D E+D++++GDDPW EF V I I + +EV+
Sbjct: 1031 KHALARMFSIEGQLEERQRIGWKLVYKDHEDDILLLGDDPWEEFVGCVKCIRILSPQEVQ 1090
Query: 766 KMTIGTTD 773
+M++ D
Sbjct: 1091 QMSLEGCD 1098
>gi|218198843|gb|EEC81270.1| hypothetical protein OsI_24368 [Oryza sativa Indica Group]
Length = 1137
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 177/364 (48%), Positives = 237/364 (65%), Gaps = 17/364 (4%)
Query: 41 SSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASS-SAFPPI 99
S C + + +++S ELWHACAGPL SLP G++VVYFPQGH EQVA+S
Sbjct: 12 SGCEGEKTKAPAINS----ELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDA 67
Query: 100 EVPNF-DLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEE 158
VP++ +L ++ C + +V L A+ E DEVY Q+ L P + EA QL +L + +
Sbjct: 68 HVPSYPNLPSKLICLLHNVTLHADPETDEVYAQMTLQP---VTSYGKEALQLSELALKQ- 123
Query: 159 GGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLH 218
+ FCKTLTASDTSTHGGFSVPRRAAE FPPLD+ Q P+QEL A+DLH
Sbjct: 124 ------ARPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDLH 177
Query: 219 GVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRN 278
W FRHIYRGQP+RHLLTTGWS+FVS K L +GD+V+F+R + +L LGIRR+ +
Sbjct: 178 DNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIFVRDEKQQLLLGIRRANRQPT 237
Query: 279 GLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIM-NPIC 337
+ S+LS + + +L+ A+A + S F +FY+PRA+ +FVIP+ KY K + N I
Sbjct: 238 NISSSVLSSDSMHIGILAAAAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQIS 297
Query: 338 IGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSP 397
+G RF+M FE ++ RR G +TGI+DLDP RW NS+WR L V WDE + + +VS
Sbjct: 298 LGMRFRMMFETEELGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSI 357
Query: 398 WEID 401
WEI+
Sbjct: 358 WEIE 361
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 80/128 (62%), Gaps = 3/128 (2%)
Query: 647 DGSFNGTAAGCKLFGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDL 706
D +FN + GF S P P++ R+ TKV+K+G+ VGR+ID+ + +GY++L
Sbjct: 972 DMAFNSIDSTINDGGFLNRSSWP-PAAPLKRMRTFTKVYKRGA-VGRSIDMSQFSGYDEL 1029
Query: 707 LSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVE 765
L +F++EG L + + GW+++Y D E+D++++GDDPW EF V I I + +EV+
Sbjct: 1030 KHALARMFSIEGQLEERQRIGWKLVYKDHEDDILLLGDDPWEEFVGCVKCIRILSPQEVQ 1089
Query: 766 KMTIGTTD 773
+M++ D
Sbjct: 1090 QMSLEGCD 1097
>gi|158564106|sp|Q0D9R7.2|ARFS_ORYSJ RecName: Full=Auxin response factor 19; AltName: Full=OsARF7a
Length = 1161
Score = 333 bits (855), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 177/364 (48%), Positives = 237/364 (65%), Gaps = 17/364 (4%)
Query: 41 SSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASS-SAFPPI 99
S C + + +++S ELWHACAGPL SLP G++VVYFPQGH EQVA+S
Sbjct: 35 SGCEGEKTKAPAINS----ELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDA 90
Query: 100 EVPNF-DLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEE 158
VP++ +L ++ C + +V L A+ E DEVY Q+ L P + EA QL +L + +
Sbjct: 91 HVPSYPNLPSKLICLLHNVTLHADPETDEVYAQMTLQP---VTSYGKEALQLSELALKQ- 146
Query: 159 GGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLH 218
+ FCKTLTASDTSTHGGFSVPRRAAE FPPLD+ Q P+QEL A+DLH
Sbjct: 147 ------ARPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDLH 200
Query: 219 GVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRN 278
W FRHIYRGQP+RHLLTTGWS+FVS K L +GD+V+F+R + +L LGIRR+ +
Sbjct: 201 DNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIFVRDEKQQLLLGIRRANRQPT 260
Query: 279 GLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIM-NPIC 337
+ S+LS + + +L+ A+A + S F +FY+PRA+ +FVIP+ KY K + N I
Sbjct: 261 NISSSVLSSDSMHIGILAAAAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQIS 320
Query: 338 IGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSP 397
+G RF+M FE ++ RR G +TGI+DLDP RW NS+WR L V WDE + + +VS
Sbjct: 321 LGMRFRMMFETEELGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSI 380
Query: 398 WEID 401
WEI+
Sbjct: 381 WEIE 384
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 80/128 (62%), Gaps = 3/128 (2%)
Query: 647 DGSFNGTAAGCKLFGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDL 706
D +FN + GF S P P++ R+ TKV+K+G+ VGR+ID+ + +GY++L
Sbjct: 996 DMAFNSIDSTINDGGFLNRSSWP-PAAPLKRMRTFTKVYKRGA-VGRSIDMSQFSGYDEL 1053
Query: 707 LSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVE 765
L +F++EG L + + GW+++Y D E+D++++GDDPW EF V I I + +EV+
Sbjct: 1054 KHALARMFSIEGQLEERQRIGWKLVYKDHEDDILLLGDDPWEEFVGCVKCIRILSPQEVQ 1113
Query: 766 KMTIGTTD 773
+M++ D
Sbjct: 1114 QMSLEGCD 1121
>gi|19352045|dbj|BAB85916.1| auxin response factor 7a [Oryza sativa]
Length = 1123
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 175/349 (50%), Positives = 231/349 (66%), Gaps = 13/349 (3%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASS-SAFPPIEVPNF-DLQPQIFCK 113
+I ELWHACAGPL SLP G++VVYFPQGH EQVA+S VP++ +L ++ C
Sbjct: 8 AINSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLICL 67
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFC 173
+ +V L A+ E DEVY Q+ L P + EA QL +L + + + FC
Sbjct: 68 LHNVTLHADPETDEVYAQMTLQP---VTSYGKEALQLSELALKQ-------ARPQTEFFC 117
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
KTLTASDTSTHGGFSVPRRAAE FPPLD+ Q P+QEL A+DLH W FRHIYRGQP+
Sbjct: 118 KTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPK 177
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
RHLLTTGWS+FVS K L +GD+V+F+R + +L LGIRR+ + + S+LS + +
Sbjct: 178 RHLLTTGWSLFVSGKRLFAGDSVIFVRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHIG 237
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIM-NPICIGTRFKMRFEMDDSP 352
+L+ A+A + S F +FY+PRA+ +FVIP+ KY K + N I +G RF+M FE ++
Sbjct: 238 ILAAAAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQISLGMRFRMMFETEELG 297
Query: 353 ERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
RR G +TGI+DLDP RW NS+WR L V WDE + + +VS WEI+
Sbjct: 298 TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIE 346
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 80/128 (62%), Gaps = 3/128 (2%)
Query: 647 DGSFNGTAAGCKLFGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDL 706
D +FN + GF S P P++ R+ TKV+K+G+ VGR+ID+ + +GY++L
Sbjct: 958 DMAFNSIDSTINDGGFLNRSSWP-PAAPLKRMRTFTKVYKRGA-VGRSIDMSQFSGYDEL 1015
Query: 707 LSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVE 765
L +F++EG L + + GW+++Y D E+D++++GDDPW EF V I I + +EV+
Sbjct: 1016 KHALARMFSIEGQLEERQRIGWKLVYKDHEDDILLLGDDPWEEFVGCVKCIRILSPQEVQ 1075
Query: 766 KMTIGTTD 773
+M++ D
Sbjct: 1076 QMSLEGCD 1083
>gi|224142772|ref|XP_002324725.1| predicted protein [Populus trichocarpa]
gi|222866159|gb|EEF03290.1| predicted protein [Populus trichocarpa]
Length = 1047
Score = 333 bits (853), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 177/351 (50%), Positives = 233/351 (66%), Gaps = 11/351 (3%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNF-DLQPQIFCKV 114
SI ELWHACAGPL SLP G++VVYFPQGH EQVA+S VP++ +L ++ C +
Sbjct: 19 SINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKETDFVPSYPNLTSKLICML 78
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
+V L A+ E DEVY Q+ L P + + EA DLG + R PT+ FCK
Sbjct: 79 HNVTLHADVETDEVYAQMTLQP---VSKYDKEALLASDLGQKQ---SRQPTE----FFCK 128
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLTASDTSTHGGF VPRRAAE FPPLD+ Q P+QELVA+DLH W FRHIYRGQP+R
Sbjct: 129 TLTASDTSTHGGFFVPRRAAEKIFPPLDFSMQPPAQELVARDLHDNTWTFRHIYRGQPKR 188
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS+FVS K + +GD+VLF+R + +L LGIR + + + L S++S + + +
Sbjct: 189 HLLTTGWSVFVSTKRIFTGDSVLFIRDEKSQLLLGIRHANRQQPALSSSLISSDSMHIGI 248
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
L+ A+A + S F +FY+P A+ ++FVIP+ KY K + +G RF+M F ++S R
Sbjct: 249 LAAAAHAAANNSPFTIFYNPSASPSEFVIPFSKYNKAMYTQGSLGMRFRMMFTTEESGVR 308
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS 405
R G +TGI+DLDP RW NS+WR L V WDE S+ +VS WEI+ V+
Sbjct: 309 RYMGTITGISDLDPVRWKNSQWRNLQVGWDESTASERPNRVSIWEIEPVVT 359
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 68/99 (68%), Gaps = 2/99 (2%)
Query: 672 SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDP-AKGWRIL 730
++Q+ R+ TKV K+GS VGR+ID+ GY++L +L +F +EG L DP + W+++
Sbjct: 924 TNQNQRMRTYTKVQKRGS-VGRSIDITCYKGYDELRHDLARMFGIEGQLEDPQSSDWKLV 982
Query: 731 YTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
Y D END+++VGDDPW EF + V I I + EV++M++
Sbjct: 983 YVDRENDILLVGDDPWEEFMSCVQSIKILSSAEVQQMSL 1021
>gi|255557566|ref|XP_002519813.1| Auxin response factor, putative [Ricinus communis]
gi|223541052|gb|EEF42609.1| Auxin response factor, putative [Ricinus communis]
Length = 1109
Score = 333 bits (853), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 181/349 (51%), Positives = 229/349 (65%), Gaps = 13/349 (3%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCK 113
SI ELW ACAGPL SLP G VVYFPQGH EQVA+S ++PN+ +L ++FC
Sbjct: 31 SINQELWQACAGPLVSLPAAGTHVVYFPQGHSEQVAASMKKDVDAQIPNYPNLPSKLFCL 90
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFC 173
+ +V L A+ E DEVY Q+ L P P + +A DL + K FC
Sbjct: 91 LHNVTLHADPETDEVYAQMTLQPVPSFDK---DALLRSDLTLKS-------NKPQTDFFC 140
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
KTLTASDTSTHGGFSVPRRAAE FPPLD+ Q P+QELVA+DLH W FRHIYRGQP+
Sbjct: 141 KTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVARDLHDNIWTFRHIYRGQPK 200
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
RHLLTTGWS+FVS K L +GD+VLF+R +L LGIRR+ + L S+LS + +
Sbjct: 201 RHLLTTGWSLFVSGKRLFAGDSVLFIRDDKQQLLLGIRRANRQPANLSSSVLSSDSMHIG 260
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKII-MNPICIGTRFKMRFEMDDSP 352
+L+ A+A + S F VFY+PRA+ ++FVIP KY K + N I +G RF+M FE ++S
Sbjct: 261 ILAAAAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKAVCSNQISLGMRFRMMFETEESG 320
Query: 353 ERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
RR G +TGI+DLDP RW NS+WR L V WDE + + +VS WEI+
Sbjct: 321 TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRNRVSIWEIE 369
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 66/92 (71%), Gaps = 2/92 (2%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSEND 737
R+ TKV+K+G+ VGR+ID+ R +GY +L +L F +EG L D + GW+++Y D END
Sbjct: 997 RTYTKVYKRGA-VGRSIDITRYSGYVELKQDLARRFGIEGQLEDRQRIGWKLVYVDHEND 1055
Query: 738 VMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
V++VGDDPW EF N V I I + +EV++M++
Sbjct: 1056 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMSL 1087
>gi|359484941|ref|XP_002266603.2| PREDICTED: auxin response factor 5-like [Vitis vinifera]
Length = 1117
Score = 333 bits (853), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 181/349 (51%), Positives = 229/349 (65%), Gaps = 13/349 (3%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCK 113
SI ELW ACAGPL +LP G +VVYFPQGH EQVA+S ++PN+ +L ++ C
Sbjct: 27 SINPELWQACAGPLVNLPPAGTLVVYFPQGHSEQVAASMKKDVDAQIPNYPNLPSRLLCI 86
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFC 173
+ +V L A+ E DEVY Q+ L P P + E+ DL + K FC
Sbjct: 87 LHNVTLHADPETDEVYAQMTLQPVPAYDK---ESLLRSDLALKT-------NKPQTDFFC 136
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
KTLTASDTSTHGGFSVPRRAAE FPPLD+ Q P+QELVAKDLH W FRHIYRGQP+
Sbjct: 137 KTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGQPK 196
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
RHLLTTGWS+FVS K L +GDAVLF+R + +L LGIRR+ + L S+LS + +
Sbjct: 197 RHLLTTGWSLFVSGKRLFAGDAVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIG 256
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIM-NPICIGTRFKMRFEMDDSP 352
+L+ A+A + S F VFY+PRA+ ++FVIP KY K N I +G RF+M FE ++S
Sbjct: 257 ILAAAAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKAAYSNQISLGMRFRMMFETEESG 316
Query: 353 ERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
RR G +TGI+DLDP RW NS+WR L V WDE + + +VS WEI+
Sbjct: 317 TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIE 365
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 70/101 (69%), Gaps = 2/101 (1%)
Query: 670 TPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWR 728
P+ Q R+ TKV+K+G+ VGR+ID+ R +GY++L +L F +EG L D + GW+
Sbjct: 996 APAPQFQRMRTYTKVYKRGA-VGRSIDITRYSGYDELKQDLARRFGIEGQLEDRQRIGWK 1054
Query: 729 ILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
++Y D ENDV++VGDDPW EF N V I I + +EV++M++
Sbjct: 1055 LVYVDHENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSL 1095
>gi|293334075|ref|NP_001169359.1| auxin response factor 4 [Zea mays]
gi|224028907|gb|ACN33529.1| unknown [Zea mays]
gi|407232690|gb|AFT82687.1| ARF4 transcription factor, partial [Zea mays subsp. mays]
Length = 936
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 166/347 (47%), Positives = 223/347 (64%), Gaps = 12/347 (3%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSA-FPPIEVPNF-DLQPQIFCKV 114
I ELWHACAGPL LP++G++V YFPQGH EQVA+++ P +PN+ L Q+ C+V
Sbjct: 37 INSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPSQLLCQV 96
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
++ L A+KE DE+Y Q+ L P D+ G + +K + FCK
Sbjct: 97 HNITLHADKETDEIYAQMTLQP----------VHSETDVFPIPTLGAYTKSKHSSEYFCK 146
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
LTASDTSTHGGFSVPRRAAE FP LDY Q P+QEL+ +DLH W FRHIYRGQP+R
Sbjct: 147 NLTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKR 206
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS+FV K L +GD+VLF+R + +L +G+RR+ + + L S+LS + + V
Sbjct: 207 HLLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGV 266
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
L+ A+A S+ F V+Y+PR + + FVIP +Y +G RF M FE ++S +R
Sbjct: 267 LAAAAHAASSGGSFTVYYNPRTSPSPFVIPLARYNTATYLQPSVGMRFAMMFETEESSKR 326
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
RC G + GI+D +P RWPNSKWR L V WDE + E+VS W+I+
Sbjct: 327 RCTGTIVGISDYEPMRWPNSKWRNLQVEWDEHGYGERPERVSLWDIE 373
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 63/108 (58%), Gaps = 2/108 (1%)
Query: 676 PGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKG-WRILYTDS 734
P R+ TKV K GS VGR+ID+ R Y++L S + +F ++G L P W+++Y D
Sbjct: 830 PPVRTYTKVQKLGS-VGRSIDVTRFRDYHELRSAIACMFGLQGKLEHPGSSDWKLVYVDY 888
Query: 735 ENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGTTDDTQSCLDQA 782
ENDV++VGDDPW EF N V I I EV++M+ C+ A
Sbjct: 889 ENDVLLVGDDPWEEFINCVRCIRILAPSEVQQMSENGVHVLNDCMQMA 936
>gi|297736017|emb|CBI24055.3| unnamed protein product [Vitis vinifera]
Length = 1034
Score = 332 bits (852), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 181/349 (51%), Positives = 229/349 (65%), Gaps = 13/349 (3%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCK 113
SI ELW ACAGPL +LP G +VVYFPQGH EQVA+S ++PN+ +L ++ C
Sbjct: 25 SINPELWQACAGPLVNLPPAGTLVVYFPQGHSEQVAASMKKDVDAQIPNYPNLPSRLLCI 84
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFC 173
+ +V L A+ E DEVY Q+ L P P + E+ DL + K FC
Sbjct: 85 LHNVTLHADPETDEVYAQMTLQPVPAYDK---ESLLRSDLALKT-------NKPQTDFFC 134
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
KTLTASDTSTHGGFSVPRRAAE FPPLD+ Q P+QELVAKDLH W FRHIYRGQP+
Sbjct: 135 KTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGQPK 194
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
RHLLTTGWS+FVS K L +GDAVLF+R + +L LGIRR+ + L S+LS + +
Sbjct: 195 RHLLTTGWSLFVSGKRLFAGDAVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIG 254
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIM-NPICIGTRFKMRFEMDDSP 352
+L+ A+A + S F VFY+PRA+ ++FVIP KY K N I +G RF+M FE ++S
Sbjct: 255 ILAAAAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKAAYSNQISLGMRFRMMFETEESG 314
Query: 353 ERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
RR G +TGI+DLDP RW NS+WR L V WDE + + +VS WEI+
Sbjct: 315 TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIE 363
Score = 96.7 bits (239), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 70/100 (70%), Gaps = 2/100 (2%)
Query: 671 PSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRI 729
P+ Q R+ TKV+K+G+ VGR+ID+ R +GY++L +L F +EG L D + GW++
Sbjct: 914 PAPQFQRMRTYTKVYKRGA-VGRSIDITRYSGYDELKQDLARRFGIEGQLEDRQRIGWKL 972
Query: 730 LYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
+Y D ENDV++VGDDPW EF N V I I + +EV++M++
Sbjct: 973 VYVDHENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSL 1012
>gi|297803732|ref|XP_002869750.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315586|gb|EFH46009.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 637
Score = 332 bits (852), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 170/354 (48%), Positives = 227/354 (64%), Gaps = 29/354 (8%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEV--PNFDLQPQIFCKV 114
+Y ELW C+GPL +P+ V YFPQGH+EQ+ +S+ + P F L P+I C V
Sbjct: 7 LYDELWKLCSGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVLPPKILCNV 66
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTP----- 169
++V L A K+ DEVY Q+ L+P +G E G SP S P
Sbjct: 67 MNVSLQAEKDTDEVYAQITLIP----------------VGT-EVDGPTSPDPSPPELQRP 109
Query: 170 --HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHI 227
H F K LTASDTSTHGGFSV R+ A +C PPLD QQ P+QELVA+D+HG +W+F+HI
Sbjct: 110 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHI 169
Query: 228 YRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSK 287
+RGQPRRHLLTTGWS FV+ K LV+GD +FLRG+ GELR+G+RR+ + ++ +P S++S
Sbjct: 170 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGEKGELRVGVRRANRQQSSMPSSVISS 229
Query: 288 QNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFE 347
+ + VL+ +A TK+MF V+Y PR + F+I KY++ + N +G RFKMRFE
Sbjct: 230 HSMHLGVLATARHATQTKTMFIVYYKPRTSQ--FIISLNKYLEAMSNKFSVGMRFKMRFE 287
Query: 348 MDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
+DSPERR +G V G+ D P+ W +SKWRCL V WDE +VSPWEI+
Sbjct: 288 GEDSPERRYSGTVIGVNDCSPH-WKDSKWRCLEVHWDEPASISRPNKVSPWEIE 340
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 72/99 (72%), Gaps = 1/99 (1%)
Query: 672 SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILY 731
S QS RS TKV QG VGRA+DL L GYN+L+ ++E LF+++G L+ + W I++
Sbjct: 515 SKQSSSTRSRTKVQMQGVPVGRAVDLTALKGYNELIDDIEKLFDIKGELQSRNQ-WEIVF 573
Query: 732 TDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIG 770
TD E D+M+VGDDPW EFCN V +I I+++EEV+KMT G
Sbjct: 574 TDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTPG 612
>gi|297606458|ref|NP_001058492.2| Os06g0702600 [Oryza sativa Japonica Group]
gi|53791908|dbj|BAD54030.1| putative auxin response factor 7a [Oryza sativa Japonica Group]
gi|53792756|dbj|BAD53792.1| putative auxin response factor 7a [Oryza sativa Japonica Group]
gi|255677372|dbj|BAF20406.2| Os06g0702600 [Oryza sativa Japonica Group]
Length = 991
Score = 332 bits (851), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 177/364 (48%), Positives = 237/364 (65%), Gaps = 17/364 (4%)
Query: 41 SSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASS-SAFPPI 99
S C + + +++S ELWHACAGPL SLP G++VVYFPQGH EQVA+S
Sbjct: 35 SGCEGEKTKAPAINS----ELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDA 90
Query: 100 EVPNF-DLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEE 158
VP++ +L ++ C + +V L A+ E DEVY Q+ L P + EA QL +L + +
Sbjct: 91 HVPSYPNLPSKLICLLHNVTLHADPETDEVYAQMTLQP---VTSYGKEALQLSELALKQ- 146
Query: 159 GGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLH 218
+ FCKTLTASDTSTHGGFSVPRRAAE FPPLD+ Q P+QEL A+DLH
Sbjct: 147 ------ARPQTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDLH 200
Query: 219 GVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRN 278
W FRHIYRGQP+RHLLTTGWS+FVS K L +GD+V+F+R + +L LGIRR+ +
Sbjct: 201 DNVWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIFVRDEKQQLLLGIRRANRQPT 260
Query: 279 GLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIM-NPIC 337
+ S+LS + + +L+ A+A + S F +FY+PRA+ +FVIP+ KY K + N I
Sbjct: 261 NISSSVLSSDSMHIGILAAAAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQIS 320
Query: 338 IGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSP 397
+G RF+M FE ++ RR G +TGI+DLDP RW NS+WR L V WDE + + +VS
Sbjct: 321 LGMRFRMMFETEELGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSI 380
Query: 398 WEID 401
WEI+
Sbjct: 381 WEIE 384
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 80/128 (62%), Gaps = 3/128 (2%)
Query: 647 DGSFNGTAAGCKLFGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDL 706
D +FN + GF S P P++ R+ TKV+K+G+ VGR+ID+ + +GY++L
Sbjct: 826 DMAFNSIDSTINDGGFLNRSSWP-PAAPLKRMRTFTKVYKRGA-VGRSIDMSQFSGYDEL 883
Query: 707 LSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVE 765
L +F++EG L + + GW+++Y D E+D++++GDDPW EF V I I + +EV+
Sbjct: 884 KHALARMFSIEGQLEERQRIGWKLVYKDHEDDILLLGDDPWEEFVGCVKCIRILSPQEVQ 943
Query: 766 KMTIGTTD 773
+M++ D
Sbjct: 944 QMSLEGCD 951
>gi|449452410|ref|XP_004143952.1| PREDICTED: auxin response factor 9-like [Cucumis sativus]
Length = 688
Score = 332 bits (851), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 162/345 (46%), Positives = 224/345 (64%), Gaps = 19/345 (5%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVD 116
+Y ELW ACAGPL +P+ V YFPQ AS++ +P F+L +I C+V+
Sbjct: 27 LYMELWRACAGPLVDIPRVDERVFYFPQQ-----ASTNLELNKRIPLFNLDSKILCRVIH 81
Query: 117 VQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTL 176
++ LA+ E+DEVY Q+ L+P E+ Q E +D P + H FCK L
Sbjct: 82 IEPLADHESDEVYAQITLMP---------ESNQNEPKSMDPCP--PEPPRPVVHSFCKVL 130
Query: 177 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHL 236
TASDTSTHGGFSV R+ A +C PPLD P+Q+LVAKDLHG EWRF+HI+RGQPRRHL
Sbjct: 131 TASDTSTHGGFSVLRKHATECLPPLDMTLATPTQDLVAKDLHGYEWRFKHIFRGQPRRHL 190
Query: 237 LTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLS 296
LTTGWS FV+ K L +GD+ +FLRG +GELR+G+RR + ++ +P S++S Q+ + VL+
Sbjct: 191 LTTGWSTFVTSKRLSAGDSFVFLRGDNGELRVGVRRRARQQSSMPPSVISSQSMHLGVLA 250
Query: 297 VVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRC 356
++AV+T++ F V+Y PR F+I KY++ + N +G RF M FE +DSPERR
Sbjct: 251 TASHAVTTQTRFVVYYKPRTCQ--FIISLNKYLEAVNNKFSVGMRFNMSFEGEDSPERRF 308
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
+G + G D+ P+ WPNS WR L V+WDE ++VSPW+I+
Sbjct: 309 SGTIIGAVDISPH-WPNSSWRSLRVQWDEQTSILRPDRVSPWDIE 352
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 66/101 (65%), Gaps = 5/101 (4%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLL--RDPAKGWRIL 730
S S RS TKV G VGRA+DL L GY+ L+ ELE +F++ G L RD W I+
Sbjct: 571 SSSANTRSRTKVLMHGMAVGRAVDLTILEGYDQLIDELEKMFDVRGQLCARDK---WEIV 627
Query: 731 YTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGT 771
YTD E D+M+VGDDPW EF N V +I I ++E+V+ M+ G+
Sbjct: 628 YTDDEGDMMLVGDDPWEEFRNMVRRIFICSKEQVKNMSSGS 668
>gi|85069283|gb|ABC69713.1| ETTb [Nicotiana tabacum]
Length = 336
Score = 332 bits (851), Expect = 5e-88, Method: Compositional matrix adjust.
Identities = 178/341 (52%), Positives = 225/341 (65%), Gaps = 10/341 (2%)
Query: 190 PRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKN 249
PRRAAEDCFPPLDY+QQRPSQELVAKDLHG+EW+FRHIYRGQPRRHLLTTGWS FV++K
Sbjct: 1 PRRAAEDCFPPLDYRQQRPSQELVAKDLHGIEWKFRHIYRGQPRRHLLTTGWSAFVNKKK 60
Query: 250 LVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV--VANAVSTKSM 307
LVSGDAVLFLR DGELRLG+RR+ Q + + L+ + NV + V NA+S+ +
Sbjct: 61 LVSGDAVLFLRTADGELRLGVRRAAQAKTC--SNYLAAYSQLLNVSGIVDVVNAISSTNA 118
Query: 308 FHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCNGVVTGITDLD 367
F + Y+PRA+ + F+IPY K+ K + +P G RFKMR E +D+ E+R G+V G++D+D
Sbjct: 119 FSICYNPRASSSGFIIPYHKFSKTLAHPFSAGMRFKMRVETEDAAEQRFTGLVVGVSDVD 178
Query: 368 PYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAP 427
P RWP SKWRCL+VRWD+ S H +VSPWEI+ S S P S P K+ R G
Sbjct: 179 PVRWPGSKWRCLLVRWDDLDVSRHN-RVSPWEIEPSGSAPVSSSLVMPSAKRTRVGFPIT 237
Query: 428 PPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHPLGFEMRA-PAHQS 486
D+P+ G V DF ES R KVLQGQE +G SP YG + P +R P S
Sbjct: 238 KADFPIPRDGIAVSDFGESSRFQKVLQGQEILGINSP-YGGFDAHSPRTAGIRCFPGFPS 296
Query: 487 LALNGIRKDNINELVRALPTS--YTGFVESNRFPKVLQGQE 525
+ + ++I L+ S GF +S+RF KVLQGQE
Sbjct: 297 SGASRL-GNSIRTLLGDTDKSPESIGFSDSSRFNKVLQGQE 336
>gi|31747324|gb|AAP57471.1| auxin response factor-like protein [Mangifera indica]
Length = 326
Score = 332 bits (850), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 157/323 (48%), Positives = 226/323 (69%), Gaps = 12/323 (3%)
Query: 34 LNSSSSSSSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-AS 92
+ SS+ +S +L +++Y ELWHACAGPL ++P++G V YFPQGH+EQV AS
Sbjct: 11 IKSSNETSKSPMEEDKDLNLETALYKELWHACAGPLVTVPRQGERVYYFPQGHIEQVEAS 70
Query: 93 SSAFPPIEVPNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLED 152
++ F ++P +DL+ +I C+V++VQL A + DEV+ Q+ LLP+P ++
Sbjct: 71 TNQFADQQMPIYDLRSKILCRVINVQLKAKPDTDEVFAQITLLPEP----------NQDE 120
Query: 153 LGVDEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQEL 212
V++E + H FCKTLTASDTSTHGGFSV RR AE+C P LD QQ P+Q+L
Sbjct: 121 NAVEKEPPPPLLPRFHVHSFCKTLTASDTSTHGGFSVLRRHAEECLPVLDMSQQPPTQDL 180
Query: 213 VAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRR 272
VAKDLHG EWRFRHI+RGQPRRHLL +GWS+FVS K LV+GDA +FLR + ELR+G+RR
Sbjct: 181 VAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRC-EKELRVGVRR 239
Query: 273 SVQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKII 332
+++ + +P S++S + + VL+ +AVST +MF V+Y PR + A+F++P+ +Y++ +
Sbjct: 240 AMRQQGNVPSSVISSHSMHLGVLATAWHAVSTGTMFTVYYKPRISPAEFIVPFDQYMESV 299
Query: 333 MNPICIGTRFKMRFEMDDSPERR 355
+ IG RFKMRFE +++PE+R
Sbjct: 300 KSNYSIGMRFKMRFEGEEAPEQR 322
>gi|350536075|ref|NP_001234740.1| auxin response factor 19 [Solanum lycopersicum]
gi|298570957|gb|ADI87602.1| auxin response factor 19 [Solanum lycopersicum]
gi|307091363|gb|ADN28050.1| auxin response factor 19 [Solanum lycopersicum]
Length = 1112
Score = 332 bits (850), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 187/400 (46%), Positives = 246/400 (61%), Gaps = 14/400 (3%)
Query: 34 LNSSSSSSSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASS 93
+N++ + N + SI ELW ACAGPL +LP G VVYFPQGH EQVA+S
Sbjct: 5 VNTAGVQQQHTVNGNPGEVEKKSINPELWQACAGPLVNLPAAGTHVVYFPQGHSEQVAAS 64
Query: 94 -SAFPPIEVPNF-DLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLE 151
++PN+ +L ++ C + ++ L A+ E DEVY Q+ L P P + EA
Sbjct: 65 MKKDVDAQIPNYPNLPSKLVCLLHNITLHADPEADEVYAQMTLQPVPSFDK---EALLRS 121
Query: 152 DLGVDEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQE 211
DL + K FCKTLTASDTSTHGGFSVPRR+AE FPPLDY Q P+QE
Sbjct: 122 DLSMKA-------NKPQTEFFCKTLTASDTSTHGGFSVPRRSAEKIFPPLDYSMQPPAQE 174
Query: 212 LVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIR 271
LVA+DLH W FRHIYRGQP+RHLLTTGWS+FVS K L +GD+VLF+R + +L LGIR
Sbjct: 175 LVARDLHDNLWTFRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIR 234
Query: 272 RSVQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKI 331
R+ + L S+LS + + +L+ A+A + S F VFY+PRA+H++FVIP KY K
Sbjct: 235 RANRQPTNLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASHSEFVIPLAKYYKA 294
Query: 332 IMNP-ICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSD 390
+ + +G RF+M FE ++S RR G +TGI+DLDP RW NS+WR L V WDE +
Sbjct: 295 TYSSQVSLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGE 354
Query: 391 HQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPD 430
+ +VS WEI+ V+ P + P + R L P D
Sbjct: 355 RRNRVSIWEIE-PVTAPFFICPTPPFFRSKRPRLPGMPDD 393
Score = 100 bits (248), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 73/113 (64%), Gaps = 6/113 (5%)
Query: 671 PSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRI 729
P Q P R+ TKVHK+G+ VGR+ID+ R +GY +L +L F +EG L D + GW++
Sbjct: 993 PPPQMPRMRTFTKVHKRGA-VGRSIDIARYSGYEELKQDLARRFGIEGQLEDRQRIGWKL 1051
Query: 730 LYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI----GTTDDTQSC 778
+Y D ENDV++VGDDPW EF N V I I + +EV+++++ G Q+C
Sbjct: 1052 VYVDHENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQISLDGDFGNNVQNQAC 1104
>gi|4104929|gb|AAD02218.1| auxin response factor 7 [Arabidopsis thaliana]
Length = 1164
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 174/347 (50%), Positives = 228/347 (65%), Gaps = 11/347 (3%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNF-DLQPQIFCKV 114
+I ELWHACAGPL SLP G++VVYFPQGH EQVA+S +P++ +L ++ C +
Sbjct: 20 NINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDFIPSYPNLPSKLICML 79
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
+V L A+ E DEVY Q+ L P + + +A D+G+ R P + FCK
Sbjct: 80 HNVTLNADPETDEVYAQMTLQP---VNKYDRDALLASDMGLKLN---RQPNE----FFCK 129
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLTASDTSTHGGFSVPRRAAE FP LD+ Q P QELVAKD+H W FRHIYRGQP+R
Sbjct: 130 TLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKR 189
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS+FVS K L +GD+VLF+R +L LGIRR+ + + L S++S + + V
Sbjct: 190 HLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGV 249
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
L+ A+A + S F +FY+PRA A+FV+P KY K + + +G RF+M FE ++ R
Sbjct: 250 LAAAAHANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGVR 309
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
R G VTGI+DLDP RW NS+WR L + WDE D +VS W+I+
Sbjct: 310 RYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIE 356
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 67/98 (68%), Gaps = 2/98 (2%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDP-AKGWRILY 731
+Q+ R+ TKV K+GS VGR+ID+ R GY++L +L +F +EG L DP W+++Y
Sbjct: 1031 AQTQRMRTYTKVQKRGS-VGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVY 1089
Query: 732 TDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
D END+++VGDDPW EF N V I I + EV++M++
Sbjct: 1090 VDHENDILLVGDDPWEEFVNCVQSIKILSSAEVQQMSL 1127
>gi|357123645|ref|XP_003563519.1| PREDICTED: auxin response factor 19-like [Brachypodium distachyon]
Length = 1149
Score = 331 bits (849), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 173/348 (49%), Positives = 231/348 (66%), Gaps = 13/348 (3%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASS-SAFPPIEVPNF-DLQPQIFCKV 114
I ELWHACAGPL SLP G++VVYFPQGH EQVA+S VPN+ +L ++ C +
Sbjct: 42 INSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPNYPNLPSKLICLL 101
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
++ L A+ E DEVY Q+ L P + EA QL +L + + ++ FCK
Sbjct: 102 HNITLHADLETDEVYAQMTLQP---VTSYGKEALQLSELALKQ-------SRPQNEFFCK 151
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLTASDTSTHGGFSVPRRAAE FPPLD+ Q P+QE+ A+DLH W FRHIYRGQP+R
Sbjct: 152 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIQARDLHDNVWTFRHIYRGQPKR 211
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS+FVS K L +GD+V+F+R + +L LGIRR+ + + S+LS + + +
Sbjct: 212 HLLTTGWSLFVSGKRLFAGDSVIFVRDERQQLLLGIRRANRQPTNISSSVLSSDSMHIGI 271
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIM-NPICIGTRFKMRFEMDDSPE 353
L+ A+A + S F +FY+PRA+ +FVIP+ KY K + N + +G RF+M FE ++
Sbjct: 272 LAAAAHADANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEELGT 331
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
RR G +TGI+DLDP RW NS+WR L V WDE + + +VS WEI+
Sbjct: 332 RRYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIE 379
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 78/124 (62%), Gaps = 3/124 (2%)
Query: 647 DGSFNGTAAGCKLFGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDL 706
D +FN +G F S P P+ R+ TKV+K+G+ VGR+ID+ + GY++L
Sbjct: 984 DMAFNSIDSGINDGTFFNRSSWP-PAPPIKRMRTFTKVYKRGA-VGRSIDISQYAGYDEL 1041
Query: 707 LSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVE 765
L +F++EG L + + GW+++Y D E+D++++GDDPW EF N V I I + +EV+
Sbjct: 1042 KHALARMFSIEGQLEERQRIGWKLVYRDHEDDILLLGDDPWEEFVNCVKYIRILSPQEVQ 1101
Query: 766 KMTI 769
+M++
Sbjct: 1102 QMSL 1105
>gi|30687949|ref|NP_851047.1| auxin response factor 7 [Arabidopsis thaliana]
gi|46576377|sp|P93022.2|ARFG_ARATH RecName: Full=Auxin response factor 7; AltName:
Full=Auxin-responsive protein IAA21/IAA23/IAA25;
AltName: Full=Protein BIPOSTO; AltName: Full=Protein
NON-PHOTOTROPIC HYPOCOTYL 4; AltName: Full=Protein
TRANSPORT INHIBITOR RESPONSE 5
gi|37540157|gb|AAG35177.1| ARF7 [Arabidopsis thaliana]
gi|49616353|gb|AAT67073.1| ARF7 [Arabidopsis thaliana]
gi|332005502|gb|AED92885.1| auxin response factor 7 [Arabidopsis thaliana]
Length = 1164
Score = 331 bits (849), Expect = 8e-88, Method: Compositional matrix adjust.
Identities = 174/347 (50%), Positives = 228/347 (65%), Gaps = 11/347 (3%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNF-DLQPQIFCKV 114
+I ELWHACAGPL SLP G++VVYFPQGH EQVA+S +P++ +L ++ C +
Sbjct: 20 NINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDFIPSYPNLPSKLICML 79
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
+V L A+ E DEVY Q+ L P + + +A D+G+ R P + FCK
Sbjct: 80 HNVTLNADPETDEVYAQMTLQP---VNKYDRDALLASDMGLKLN---RQPNE----FFCK 129
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLTASDTSTHGGFSVPRRAAE FP LD+ Q P QELVAKD+H W FRHIYRGQP+R
Sbjct: 130 TLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKR 189
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS+FVS K L +GD+VLF+R +L LGIRR+ + + L S++S + + V
Sbjct: 190 HLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGV 249
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
L+ A+A + S F +FY+PRA A+FV+P KY K + + +G RF+M FE ++ R
Sbjct: 250 LAAAAHANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGVR 309
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
R G VTGI+DLDP RW NS+WR L + WDE D +VS W+I+
Sbjct: 310 RYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIE 356
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 67/98 (68%), Gaps = 2/98 (2%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDP-AKGWRILY 731
+Q+ R+ TKV K+GS VGR+ID+ R GY++L +L +F +EG L DP W+++Y
Sbjct: 1031 AQTQRMRTYTKVQKRGS-VGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVY 1089
Query: 732 TDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
D END+++VGDDPW EF N V I I + EV++M++
Sbjct: 1090 VDHENDILLVGDDPWEEFVNCVQSIKILSSAEVQQMSL 1127
>gi|414584938|tpg|DAA35509.1| TPA: auxin response factor 4 [Zea mays]
Length = 936
Score = 331 bits (848), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 166/347 (47%), Positives = 222/347 (63%), Gaps = 12/347 (3%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSA-FPPIEVPNF-DLQPQIFCKV 114
I ELWHACAGPL LP++G++V YFPQGH EQVA+++ P +PN+ L Q+ C+V
Sbjct: 37 INSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPSQLLCQV 96
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
++ L A+KE DE+Y Q+ L P D+ G + +K FCK
Sbjct: 97 HNITLHADKETDEIYAQMTLQP----------VHSETDVFPIPTLGAYTKSKHPSEYFCK 146
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
LTASDTSTHGGFSVPRRAAE FP LDY Q P+QEL+ +DLH W FRHIYRGQP+R
Sbjct: 147 NLTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKR 206
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS+FV K L +GD+VLF+R + +L +G+RR+ + + L S+LS + + V
Sbjct: 207 HLLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGV 266
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
L+ A+A S+ F V+Y+PR + + FVIP +Y +G RF M FE ++S +R
Sbjct: 267 LAAAAHAASSGGSFTVYYNPRTSPSPFVIPLARYNMATYLQPSVGMRFAMMFETEESSKR 326
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
RC G + GI+D +P RWPNSKWR L V WDE + E+VS W+I+
Sbjct: 327 RCTGTIVGISDYEPMRWPNSKWRNLQVEWDEHGYGERPERVSLWDIE 373
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 63/108 (58%), Gaps = 2/108 (1%)
Query: 676 PGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKG-WRILYTDS 734
P R+ TKV K GS VGR+ID+ R Y++L S + +F ++G L P W+++Y D
Sbjct: 830 PPVRTYTKVQKLGS-VGRSIDVTRFRDYHELRSAIACMFGLQGKLEHPGSSDWKLVYVDY 888
Query: 735 ENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGTTDDTQSCLDQA 782
ENDV++VGDDPW EF N V I I EV++M+ C+ A
Sbjct: 889 ENDVLLVGDDPWEEFINCVRCIRILAPSEVQQMSENGVHVLNDCMQMA 936
>gi|295844282|gb|ADG43138.1| auxin response factor 4 [Zea mays]
Length = 935
Score = 331 bits (848), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 166/347 (47%), Positives = 222/347 (63%), Gaps = 12/347 (3%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSA-FPPIEVPNF-DLQPQIFCKV 114
I ELWHACAGPL LP++G++V YFPQGH EQVA+++ P +PN+ L Q+ C+V
Sbjct: 36 INSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPSQLLCQV 95
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
++ L A+KE DE+Y Q+ L P D+ G + +K FCK
Sbjct: 96 HNITLHADKETDEIYAQMTLQP----------VHSETDVFPIPTLGAYTKSKHPSEYFCK 145
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
LTASDTSTHGGFSVPRRAAE FP LDY Q P+QEL+ +DLH W FRHIYRGQP+R
Sbjct: 146 NLTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKR 205
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS+FV K L +GD+VLF+R + +L +G+RR+ + + L S+LS + + V
Sbjct: 206 HLLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGV 265
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
L+ A+A S+ F V+Y+PR + + FVIP +Y +G RF M FE ++S +R
Sbjct: 266 LAAAAHAASSGGSFTVYYNPRTSPSPFVIPLARYNMATYLQPSVGMRFAMMFETEESSKR 325
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
RC G + GI+D +P RWPNSKWR L V WDE + E+VS W+I+
Sbjct: 326 RCTGTIVGISDYEPMRWPNSKWRNLQVEWDEHGYGERPERVSLWDIE 372
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 63/108 (58%), Gaps = 2/108 (1%)
Query: 676 PGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKG-WRILYTDS 734
P R+ TKV K GS VGR+ID+ R Y++L S + +F ++G L P W+++Y D
Sbjct: 829 PPVRTYTKVQKLGS-VGRSIDVTRFRDYHELRSAIACMFGLQGKLEHPGSSDWKLVYVDY 887
Query: 735 ENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGTTDDTQSCLDQA 782
ENDV++VGDDPW EF N V I I EV++M+ C+ A
Sbjct: 888 ENDVLLVGDDPWEEFINCVRCIRILAPSEVQQMSENGVHVLNDCMQMA 935
>gi|356496084|ref|XP_003516900.1| PREDICTED: auxin response factor 9-like [Glycine max]
Length = 692
Score = 331 bits (848), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 178/389 (45%), Positives = 246/389 (63%), Gaps = 24/389 (6%)
Query: 49 SSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQ 107
S S +Y + W ACAGPL +P+ G V YFPQGH+EQ+ AS++ +P L
Sbjct: 13 SGESGEDELYEQQWKACAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIPLLKLP 72
Query: 108 PQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKS 167
+I C+VV+V LLA +E DEVY Q+ L+P E+ Q E D P ++
Sbjct: 73 TKILCRVVNVHLLAEQETDEVYAQITLVP---------ESSQDEPTNADPCTA--EPPRA 121
Query: 168 TPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHI 227
H F K LTASDTSTHGGFSV R+ A +C P LD Q P+QELVAKDLHG EWRF+HI
Sbjct: 122 PVHSFSKVLTASDTSTHGGFSVLRKHATECLPVLDMSQPTPTQELVAKDLHGYEWRFKHI 181
Query: 228 YRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSK 287
+RGQPRRHLLTTGWS FV+ K LV+GD +FLRG +GELR+G+RR + + +P S++S
Sbjct: 182 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGDNGELRVGVRRLARQASSMPSSVISS 241
Query: 288 QNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFE 347
Q+ + VL+ ++AV+T+++F V+Y PR + F+I KY++ + +G RFKMRFE
Sbjct: 242 QSMHLGVLATASHAVATQTLFVVYYKPRTSQ--FIIGVNKYLEAMDKKFSVGMRFKMRFE 299
Query: 348 MDDSPE--RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS 405
DDS E +R +G + G+ D+ P+ W NSKWR L V+WDE ++VSPWEI+
Sbjct: 300 GDDSAETDKRFSGTIVGVEDISPH-WVNSKWRSLKVQWDEPAAVPRPDRVSPWEIE---- 354
Query: 406 LPPLSIQSSPRMK--KLRTGLQAPPPDYP 432
P ++ S+P ++ ++T PP + P
Sbjct: 355 -PFVASASTPSVQPTMVKTKRPRPPSETP 382
Score = 104 bits (260), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/93 (52%), Positives = 68/93 (73%), Gaps = 1/93 (1%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDV 738
RS TKV QG VGRA+DL L+GY L++ELE +FN++G L+ K W I++TD E D+
Sbjct: 581 RSRTKVQMQGVAVGRAVDLTMLDGYGQLINELEDMFNIKGQLQHRNK-WEIVFTDDEGDM 639
Query: 739 MVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGT 771
M+VGDDPW EFCN V +I I + ++V+KM+ G+
Sbjct: 640 MLVGDDPWPEFCNMVRRIFICSSQDVKKMSCGS 672
>gi|242094110|ref|XP_002437545.1| hypothetical protein SORBIDRAFT_10g029130 [Sorghum bicolor]
gi|241915768|gb|EER88912.1| hypothetical protein SORBIDRAFT_10g029130 [Sorghum bicolor]
Length = 1143
Score = 330 bits (847), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 176/348 (50%), Positives = 232/348 (66%), Gaps = 13/348 (3%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASS-SAFPPIEVPNF-DLQPQIFCKV 114
I ELWHACAGPL SLP G++VVYFPQGH EQVA+S VP++ +L ++ C +
Sbjct: 32 INSELWHACAGPLVSLPPAGSLVVYFPQGHSEQVAASMQKDVDGHVPSYPNLPSKLICLL 91
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
+V L A+ E DEVY Q+ LLP + EA QL +L + + P T FCK
Sbjct: 92 HNVTLHADPETDEVYAQMTLLP---VTSYGKEALQLSELAL------KQPRPQT-EFFCK 141
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLTASDTSTHGGFSVPRRAAE FPPLD+ Q P+QE+ A+DLH W FRHIYRGQP+R
Sbjct: 142 TLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIQARDLHDNVWTFRHIYRGQPKR 201
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS+FVS K L +GD+V+F+R + +L LGIRR+ + + S+LS + + +
Sbjct: 202 HLLTTGWSLFVSGKRLFAGDSVIFVRDERQQLLLGIRRANRQPTNISSSVLSSDSMHIGI 261
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIM-NPICIGTRFKMRFEMDDSPE 353
L+ A+A + S F +FY+PRA+ +FV+P+ KY K + N I +G RF+M FE ++
Sbjct: 262 LAAAAHAAANNSPFTIFYNPRASPTEFVVPFAKYQKALYGNQISLGMRFRMMFETEELGT 321
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
RR G +TGI+DLDP RW NS+WR L V WDE + + +VS WEI+
Sbjct: 322 RRYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIE 369
Score = 98.2 bits (243), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 82/125 (65%), Gaps = 5/125 (4%)
Query: 647 DGSFNGTAAGCKLFGF-SLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYND 705
D +FN +G GF + TS P P + R+ TKV+K+G+ VGR+ID+ + NGY++
Sbjct: 979 DMAFNSIDSGMNDGGFVNRTSWPPAPPLKR--MRTFTKVYKRGA-VGRSIDISQFNGYDE 1035
Query: 706 LLSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEV 764
L L +F+MEG L + + GW+++Y D E+D++++GDDPW EF N V I I + +EV
Sbjct: 1036 LKHALARMFSMEGQLEERQRIGWKLVYKDHEDDILLLGDDPWEEFVNCVKCIRILSPQEV 1095
Query: 765 EKMTI 769
++M++
Sbjct: 1096 QQMSL 1100
>gi|73697836|gb|AAZ81522.1| auxin response factor 2 [Gossypium arboreum]
Length = 1099
Score = 330 bits (847), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 184/391 (47%), Positives = 244/391 (62%), Gaps = 15/391 (3%)
Query: 34 LNSSSSSSSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASS 93
+ S + C ++ + + I ELW ACAGPL +LP G VVYFPQGH EQVA+S
Sbjct: 1 MGKSELTDGCLSDDAGEAPERRHINPELWQACAGPLVNLPAAGTHVVYFPQGHSEQVAAS 60
Query: 94 SAFP-PIEVPNF-DLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLE 151
++PN+ +L ++ C + +V L A+ E DEVY Q+ L P + + EA
Sbjct: 61 MKRDVDAQIPNYPNLPSKLLCLLHNVTLHADPETDEVYAQMTLQP---VSSFDKEALLRS 117
Query: 152 DLGVDEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQE 211
DL + K P FCKTLTASDTSTHGGFSVPRRAAE FPPLD+ Q P+QE
Sbjct: 118 DLSLKS-------NKPQPEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQTPAQE 170
Query: 212 LVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIR 271
LVA+DLH W+FRHIYRG+P+RHLLTTGWS+FVS K L +GD+VLF+R + +L LGIR
Sbjct: 171 LVARDLHENVWKFRHIYRGKPKRHLLTTGWSLFVSGKRLFAGDSVLFIRDETQQLLLGIR 230
Query: 272 RSVQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKI 331
R+ + L S+LS + + +L+ A+A + S F VFY+PRA+ ++FVIP KY K
Sbjct: 231 RANRQPANLSSSVLSSDSMHIGILAAAAHAAANNSPFTVFYNPRASLSEFVIPLAKYYKA 290
Query: 332 IMN-PICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSD 390
+ N I G RF+M FE ++S RR G +TGI+D+DP RW NS+WR L V WDE +
Sbjct: 291 VYNHQISPGMRFRMMFETEESGTRRYMGTITGISDIDPVRWKNSQWRNLQVGWDESTAGE 350
Query: 391 HQEQVSPWEIDRSVSLPPLSIQSSPRMKKLR 421
+ +VS WEI+ + P I SP + R
Sbjct: 351 RRNRVSIWEIEPVTA--PFFICPSPLFRSKR 379
Score = 99.0 bits (245), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 71/101 (70%), Gaps = 2/101 (1%)
Query: 670 TPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWR 728
TP SQ R+ TKV+K+G+ VGR+ID+ R +GY++L +L F +EG L D + GW+
Sbjct: 978 TPPSQFQRLRTYTKVYKRGA-VGRSIDITRYSGYDELKQDLARRFGIEGQLEDRGRVGWK 1036
Query: 729 ILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
++Y D ENDV++VGDDPW EF N V I I + +EV++M++
Sbjct: 1037 LVYVDHENDVLLVGDDPWEEFINCVRCIKILSPQEVQQMSM 1077
>gi|85069281|gb|ABC69712.1| ETTa [Nicotiana tabacum]
Length = 336
Score = 330 bits (847), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 176/341 (51%), Positives = 224/341 (65%), Gaps = 10/341 (2%)
Query: 190 PRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKN 249
PRRAAEDCFPPLDY+QQRPSQELVAKDLHG+EW+FRHIYRGQPRRHLLTTGWS FV++K
Sbjct: 1 PRRAAEDCFPPLDYRQQRPSQELVAKDLHGIEWKFRHIYRGQPRRHLLTTGWSAFVNRKK 60
Query: 250 LVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV--VANAVSTKSM 307
LVSGDAVLFLR DGELRLG+RR+ Q + + L+ + NV + V A+S+ +
Sbjct: 61 LVSGDAVLFLRTADGELRLGVRRAAQAKTC--SNYLAAYSQLLNVSGIVDVVKAISSTNA 118
Query: 308 FHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCNGVVTGITDLD 367
F + Y+PRA+ + F++PY K+ K + +P G RFKMR E +D+ E+R G+V G++D+D
Sbjct: 119 FSICYNPRASSSGFILPYHKFSKTLAHPFSAGMRFKMRVETEDAAEQRFTGLVVGVSDVD 178
Query: 368 PYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAP 427
P RWP SKWRCL+VRWD+ S H +VSPWEI+ S S P S P K+ R G
Sbjct: 179 PVRWPGSKWRCLLVRWDDLDVSRHN-RVSPWEIEPSGSAPVSSSLVMPSAKRTRVGFPIT 237
Query: 428 PPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHPLGFEMRA-PAHQS 486
D+P+ G V DF ES R KVLQGQE +G SP G D + P +R P S
Sbjct: 238 KADFPIPRDGIAVSDFGESSRFQKVLQGQEILGISSPFVGFDA-HSPRTAGIRCFPGFPS 296
Query: 487 LALNGIRKDNINELVRALPTS--YTGFVESNRFPKVLQGQE 525
+ + ++I L+ S GF +S+RF KVLQGQE
Sbjct: 297 SGASRL-GNSIRTLLGDTDKSPESIGFSDSSRFNKVLQGQE 336
>gi|15233647|ref|NP_194129.1| auxin response factor 9 [Arabidopsis thaliana]
gi|46576670|sp|Q9XED8.1|ARFI_ARATH RecName: Full=Auxin response factor 9
gi|4580575|gb|AAD24427.1|AF082176_1 auxin response factor 9 [Arabidopsis thaliana]
gi|12744967|gb|AAK06863.1|AF344312_1 auxin response factor 9 [Arabidopsis thaliana]
gi|4972102|emb|CAB43898.1| auxin response factor 9 (ARF9) [Arabidopsis thaliana]
gi|7269247|emb|CAB81316.1| auxin response factor 9 (ARF9) [Arabidopsis thaliana]
gi|332659435|gb|AEE84835.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 638
Score = 330 bits (846), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 172/354 (48%), Positives = 228/354 (64%), Gaps = 29/354 (8%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEV--PNFDLQPQIFCKV 114
+Y ELW CAGPL +P+ V YFPQGH+EQ+ +S+ + P F L P+I C V
Sbjct: 9 LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVLPPKILCNV 68
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTP----- 169
++V L A K+ DEVY Q+ L+P + E VDE SP S P
Sbjct: 69 MNVSLQAEKDTDEVYAQITLIP------VGTE--------VDE---PMSPDPSPPELQRP 111
Query: 170 --HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHI 227
H F K LTASDTSTHGGFSV R+ A +C PPLD QQ P+QELVA+D+HG +W+F+HI
Sbjct: 112 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHI 171
Query: 228 YRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSK 287
+RGQPRRHLLTTGWS FV+ K LV+GD +FLRG++GELR+G+RR+ ++ +P S++S
Sbjct: 172 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISS 231
Query: 288 QNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFE 347
+ + VL+ +A TK+MF V+Y PR + F+I KY++ + N +G RFKMRFE
Sbjct: 232 HSMHLGVLATARHATQTKTMFIVYYKPRTSQ--FIISLNKYLEAMSNKFSVGMRFKMRFE 289
Query: 348 MDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
+DSPERR +G V G+ D P+ W +SKWRCL V WDE +VSPWEI+
Sbjct: 290 GEDSPERRYSGTVIGVKDCSPH-WKDSKWRCLEVHWDEPASISRPNKVSPWEIE 342
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 72/99 (72%), Gaps = 1/99 (1%)
Query: 672 SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILY 731
S QS RS TKV QG VGRA+DL L GYN+L+ ++E LF+++G LR + W I++
Sbjct: 516 SKQSSSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRSRNQ-WEIVF 574
Query: 732 TDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIG 770
TD E D+M+VGDDPW EFCN V +I I+++EEV+KMT G
Sbjct: 575 TDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTPG 613
>gi|79325241|ref|NP_001031706.1| auxin response factor 9 [Arabidopsis thaliana]
gi|332659436|gb|AEE84836.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 636
Score = 330 bits (845), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 172/354 (48%), Positives = 228/354 (64%), Gaps = 29/354 (8%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEV--PNFDLQPQIFCKV 114
+Y ELW CAGPL +P+ V YFPQGH+EQ+ +S+ + P F L P+I C V
Sbjct: 9 LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVLPPKILCNV 68
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTP----- 169
++V L A K+ DEVY Q+ L+P + E VDE SP S P
Sbjct: 69 MNVSLQAEKDTDEVYAQITLIP------VGTE--------VDEP---MSPDPSPPELQRP 111
Query: 170 --HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHI 227
H F K LTASDTSTHGGFSV R+ A +C PPLD QQ P+QELVA+D+HG +W+F+HI
Sbjct: 112 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHI 171
Query: 228 YRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSK 287
+RGQPRRHLLTTGWS FV+ K LV+GD +FLRG++GELR+G+RR+ ++ +P S++S
Sbjct: 172 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISS 231
Query: 288 QNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFE 347
+ + VL+ +A TK+MF V+Y PR + F+I KY++ + N +G RFKMRFE
Sbjct: 232 HSMHLGVLATARHATQTKTMFIVYYKPRTSQ--FIISLNKYLEAMSNKFSVGMRFKMRFE 289
Query: 348 MDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
+DSPERR +G V G+ D P+ W +SKWRCL V WDE +VSPWEI+
Sbjct: 290 GEDSPERRYSGTVIGVKDCSPH-WKDSKWRCLEVHWDEPASISRPNKVSPWEIE 342
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 72/99 (72%), Gaps = 1/99 (1%)
Query: 672 SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILY 731
S QS RS TKV QG VGRA+DL L GYN+L+ ++E LF+++G LR + W I++
Sbjct: 514 SKQSSSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRSRNQ-WEIVF 572
Query: 732 TDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIG 770
TD E D+M+VGDDPW EFCN V +I I+++EEV+KMT G
Sbjct: 573 TDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTPG 611
>gi|242088483|ref|XP_002440074.1| hypothetical protein SORBIDRAFT_09g025500 [Sorghum bicolor]
gi|241945359|gb|EES18504.1| hypothetical protein SORBIDRAFT_09g025500 [Sorghum bicolor]
Length = 575
Score = 330 bits (845), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 224/554 (40%), Positives = 308/554 (55%), Gaps = 56/554 (10%)
Query: 142 GLNLEAKQLEDL-GVDEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPP 200
G N+ + E+ G E+G G K T HMFCKTLTASDTSTHGGFSVPRRAAEDCFPP
Sbjct: 3 GRNIHDGETEEKDGEKEDGDGE---KLTSHMFCKTLTASDTSTHGGFSVPRRAAEDCFPP 59
Query: 201 LDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLR 260
LDY+Q RPSQEL+AKDLHG++WRFRHIYRGQPRRHLLTTGWS F+++K LVSGDAVLFLR
Sbjct: 60 LDYEQLRPSQELIAKDLHGMKWRFRHIYRGQPRRHLLTTGWSSFINKKKLVSGDAVLFLR 119
Query: 261 GKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHAD 320
G DGELRLG+RR+VQ +N ++ +S +LS VA+++ +S+FH+ ++PR ++
Sbjct: 120 GSDGELRLGVRRAVQLKNEALLEAVNCTDSKLLMLSAVASSLDNRSIFHICFNPRIGASE 179
Query: 321 FVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLM 380
F++PY K++K + P IGTRFK+ + +D+ ER G+++GI+++DP RWP SKW+ L+
Sbjct: 180 FIVPYCKFLKGLNYPFSIGTRFKVGCKNEDANERSF-GLISGISEVDPIRWPGSKWKSLL 238
Query: 381 VRWDECIGSDHQEQVSPWEIDR---SVSLPP-LSIQSSPRMKKL--RTGLQAPPPDYPVS 434
V+WD HQ +VSPW+I+R SVS+ LS S RMK + L AP D
Sbjct: 239 VKWDGDTKYSHQNRVSPWDIERVGSSVSVTHCLSSCVSKRMKLCFPQGNLDAPILD---- 294
Query: 435 ARGGGVLDFEESVRSSKVLQGQE--NVGFVSPLYGCDTVNHPLGFEMRAPAHQSLALNGI 492
G G D + +VLQGQE V + + DT + R A +
Sbjct: 295 --GNGRPDSVGTEGFHQVLQGQELVRVHGAACSHSSDTPRCQGSYGRRFSAD----VWNC 348
Query: 493 RKDNINELVRALPTSYTGFVESNRFPKVLQGQEICPLRSLTGKVDLNLGTWGKPNFGCNS 552
+ ++ + GF ES +F +VLQGQE+ + + + D + G N S
Sbjct: 349 KMNDGHLNTTGFAYQPLGFSESVKFSEVLQGQEMSQVAAPSFMRDAF--SAGTQNGRVRS 406
Query: 553 MNMYQASKPNIYPPPSESLSNMFFPYGDM--PKTVQ--HHTMPPYASNLQRENVKLNSSS 608
+ Q S +L P ++ P +V + TM P +L+ +
Sbjct: 407 FDYVQRSAAT----QGYALQQFNLPATEVHSPSSVLMFNQTMVP--------QPELDGLT 454
Query: 609 IQMPAIGAEIRKANLLNEHKP-------------VENIPTPTFKANMRSHKDGSFNGTAA 655
+ A G+ + E +P E + T A R K GS +
Sbjct: 455 NREEAYGSGYSSIAIQREAEPWPSTQQQRVRENGSEPLDTTEASAPARIAKSGSVDRGVG 514
Query: 656 G--CKLFGFSLTSE 667
G CKLFGFSLT +
Sbjct: 515 GSSCKLFGFSLTEK 528
>gi|413919844|gb|AFW59776.1| hypothetical protein ZEAMMB73_806966 [Zea mays]
Length = 958
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 170/360 (47%), Positives = 227/360 (63%), Gaps = 25/360 (6%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSA-FPPIEVPNF-DLQPQIFCKV 114
I ELWHACAGPL LP++G++V YFPQGH EQVA+++ P +PN+ L PQ+ C+V
Sbjct: 36 INSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPPQLLCQV 95
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
++ L A+KE DE+Y Q+ L P L+ E D+ G + +K FCK
Sbjct: 96 HNITLHADKETDEIYCQMTLQP------LHSET----DVFPIPTLGAYTKSKHPTEYFCK 145
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFP-------------PLDYKQQRPSQELVAKDLHGVE 221
LTASDTSTHGGFSVPRRAAE FP P DY Q P+QEL+ +DLH
Sbjct: 146 NLTASDTSTHGGFSVPRRAAEKLFPQLVRASAQTRVFNPQDYSMQPPNQELIVRDLHDNM 205
Query: 222 WRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLP 281
W FRHIYRGQP+RHLLTTGWS+FV K L +GD+VLF+R + +L +G+RR+ + + L
Sbjct: 206 WTFRHIYRGQPKRHLLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALS 265
Query: 282 DSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTR 341
S+LS + + VL+ A+A S+ F ++Y+PR + + FVIP +Y K +G R
Sbjct: 266 SSVLSTDSMHIGVLAAAAHAASSGGSFTIYYNPRTSPSPFVIPLARYNKATYLQPSVGMR 325
Query: 342 FKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
F M FE ++S +RRC G + GI+D DP RWPNSKWR L V WDE + E+VS W+I+
Sbjct: 326 FAMMFETEESSKRRCTGAIVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIE 385
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 88/189 (46%), Gaps = 9/189 (4%)
Query: 595 SNLQRENVKLNSSSIQMPAIGAEIRKANLLNEHKPVENIPTPTFKANMRSHKDGSFNGTA 654
S L E + +NSSS P E P P + + S S + A
Sbjct: 778 SGLHMEAIHINSSSCSQPLATGSFDAGAFPKLSNIRECQPLPLQEIHTSSMGTPSCSMDA 837
Query: 655 AGCKLFGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLF 714
A +G +++ P R+ TKV K GS VGR ID+ R Y++L S + +F
Sbjct: 838 AA--EYGTDRSAK-----QMKPPVRTYTKVQKLGS-VGRCIDVTRFRDYHELRSAIACMF 889
Query: 715 NMEGLLRDPAKG-WRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGTTD 773
++G L P W+++Y D ENDV++VGDDPW EF N V I I + EV++M+
Sbjct: 890 GLQGKLEHPGSSDWKLVYVDYENDVLLVGDDPWEEFINCVRCIRILSPSEVQQMSENGVH 949
Query: 774 DTQSCLDQA 782
C+ A
Sbjct: 950 VLNDCIQIA 958
>gi|379323210|gb|AFD01304.1| auxin response factor 7-2 [Brassica rapa subsp. pekinensis]
Length = 1100
Score = 329 bits (844), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 173/347 (49%), Positives = 228/347 (65%), Gaps = 11/347 (3%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNF-DLQPQIFCKV 114
+I ELWHACAGPL SLP G++VVYFPQGH EQVA+S +P++ +L ++ C +
Sbjct: 20 NINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDFIPSYPNLPSKLICML 79
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
+V L A+ E DEVY Q+ L P + + +A D+G+ R P + FCK
Sbjct: 80 QNVTLNADPETDEVYAQMTLQP---VNKYDRDALLASDMGLKLN---RQPNE----FFCK 129
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLTASDTSTHGGFSVPRRAAE FP LD+ Q P QELVAKD+H W FRHIYRGQP+R
Sbjct: 130 TLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKR 189
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS+FVS K L +GD+VLF+R +L LGIRR+ + + L S++S + + V
Sbjct: 190 HLLTTGWSVFVSNKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGV 249
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
L+ A+A + S F +FY+PRA A+FV+P KY K + + +G RF+M FE ++ R
Sbjct: 250 LAAAAHANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGVR 309
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
R G VTGI+DLDP RW +S+WR L + WDE D +VS W+I+
Sbjct: 310 RYMGTVTGISDLDPVRWKSSQWRNLQIGWDESAAGDRPSRVSVWDIE 356
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 67/98 (68%), Gaps = 2/98 (2%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDP-AKGWRILY 731
+Q+ R+ TKV K+GS VGR+ID+ R GY++L +L +F +EG L DP W+++Y
Sbjct: 967 TQTQRMRTYTKVQKRGS-VGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVY 1025
Query: 732 TDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
D END+++VGDDPW EF N V I I + EV++M++
Sbjct: 1026 VDHENDILLVGDDPWEEFVNCVQSIKILSSAEVQQMSL 1063
>gi|379323216|gb|AFD01307.1| auxin response factor 9-1 [Brassica rapa subsp. pekinensis]
Length = 602
Score = 328 bits (842), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 171/353 (48%), Positives = 231/353 (65%), Gaps = 29/353 (8%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKVV 115
+Y ELW AGPL +P+ V YFPQGH+EQ+ AS+ P FDL P+I C+V+
Sbjct: 1 MYEELWKLSAGPLVDVPQAEERVYYFPQGHMEQLEASTQQDLNTMKPLFDLPPKILCRVM 60
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTP------ 169
+V+L A K+ DEVY Q+ L+P EG VDE SP S P
Sbjct: 61 NVRLQAEKDTDEVYAQIMLMP----EG-----------TVDE---PMSPDPSPPELQKPK 102
Query: 170 -HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIY 228
H F K LTASDTSTHGGFSV R+ A +C PPLD QQ P+QELVA+D+HG +W+F+HI+
Sbjct: 103 FHSFTKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYKWKFKHIF 162
Query: 229 RGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQ 288
RGQPRRHLLTTGWS FV+ K LV+GD +FLRG++GELR+G+RR+ + ++ +P S++S
Sbjct: 163 RGQPRRHLLTTGWSTFVTSKKLVAGDTFVFLRGENGELRVGVRRANRQQSSMPSSVISSH 222
Query: 289 NSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEM 348
+ + VL+ +A T+SMF V+Y PR + F++ KY++ + + +G RFKMRFE
Sbjct: 223 SMHLGVLATACHATQTRSMFTVYYKPRTSQ--FILSLHKYLEAMNSKFSVGMRFKMRFEG 280
Query: 349 DDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
DDSPERR +G V G+ D P+ W +SKWR L+V WDE ++VSPWE++
Sbjct: 281 DDSPERRFSGTVVGVQDCSPH-WKDSKWRSLIVNWDEPASFTRPDKVSPWEME 332
Score = 109 bits (272), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 53/99 (53%), Positives = 70/99 (70%), Gaps = 1/99 (1%)
Query: 672 SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILY 731
S Q RS TKV QG VGRA+DL +NGY +L+ +LE LF++EG L+ W I++
Sbjct: 483 SKQINSSRSRTKVQMQGVPVGRAVDLTLINGYVELIDDLEKLFDIEGELKS-RNQWEIVF 541
Query: 732 TDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIG 770
TD E D+M+VGDDPW EFCN V +I I+++EEV+KMT G
Sbjct: 542 TDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTPG 580
>gi|449470376|ref|XP_004152893.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101205542 [Cucumis sativus]
Length = 1107
Score = 328 bits (842), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 180/351 (51%), Positives = 225/351 (64%), Gaps = 25/351 (7%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQI--------F 111
ELW ACAGPL +LP G VVYFPQGH EQVA+S + D Q I F
Sbjct: 30 ELWQACAGPLVNLPPAGYHVVYFPQGHSEQVAASLR------KDVDGQVTIYLYHYYFAF 83
Query: 112 CKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHM 171
K+ + L A+ E DEVY Q+ LLP P + +A DL + K P
Sbjct: 84 LKLCSLYLXADPETDEVYAQMTLLPVPSFDK---DALLRSDLALKS-------NKPQPEF 133
Query: 172 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQ 231
FCKTLTASDTSTHGGFSVPRRAAE FPPLD+ Q P+QELVAKDLH W FRHIYRGQ
Sbjct: 134 FCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRGQ 193
Query: 232 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSY 291
P+RHLLTTGWS+FVS K L++GD+VLF+R + +L LGIRR+ + L S+LS + +
Sbjct: 194 PKRHLLTTGWSLFVSGKRLLAGDSVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMH 253
Query: 292 PNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKII-MNPICIGTRFKMRFEMDD 350
+L+ A+A + S F VFY+PRA+ ++FVIP KY K + N I +G RF+M FE ++
Sbjct: 254 IGILAAAAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKAVSANQISLGMRFRMMFETEE 313
Query: 351 SPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
S RR G +TGI+DLDP RW S+WR L V WDE G + + +VS WEI+
Sbjct: 314 SGTRRYMGTITGISDLDPVRWKGSQWRNLQVGWDESTGGERRNRVSVWEIE 364
Score = 96.3 bits (238), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 67/92 (72%), Gaps = 2/92 (2%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSEND 737
R+ TKV+K+G+ VGR+ID+ R +GY++L +L F +EG L D K GW+++Y D END
Sbjct: 995 RTYTKVYKRGA-VGRSIDIARYSGYDELKQDLARRFGIEGQLEDRQKIGWKLVYVDHEND 1053
Query: 738 VMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
V++VGDDPW +F N V I I + +EV++M++
Sbjct: 1054 VLLVGDDPWDDFVNCVRSIKILSPQEVQQMSL 1085
>gi|356504356|ref|XP_003520962.1| PREDICTED: auxin response factor 9-like [Glycine max]
Length = 691
Score = 328 bits (841), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 177/381 (46%), Positives = 244/381 (64%), Gaps = 25/381 (6%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKVV 115
+Y LW CAGPL +P+ G V YFPQGH+EQ+ AS++ +P L +I C+VV
Sbjct: 21 MYEPLWKGCAGPLVDVPRVGQRVFYFPQGHMEQLEASTNQELNQRIPLLKLPTKILCRVV 80
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKT 175
+V LLA +E DEVY Q+ L+P E+ Q E + D P ++ H F K
Sbjct: 81 NVHLLAEQETDEVYAQITLVP---------ESNQDEPMNPDPCTA--EPPRAPVHSFSKV 129
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
LTASDTSTHGGFSV R+ A +C P LD Q P+QELVAKDLHG EWRF+HI+RGQPRRH
Sbjct: 130 LTASDTSTHGGFSVLRKHAMECLPALDMSQPTPTQELVAKDLHGYEWRFKHIFRGQPRRH 189
Query: 236 LLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVL 295
LLTTGWS FV+ K LV+GD +FLRG +GELR+G+RR + + +P S++S Q+ + VL
Sbjct: 190 LLTTGWSTFVTSKRLVAGDTFVFLRGDNGELRVGVRRLARQASSMPSSVISSQSMHLGVL 249
Query: 296 SVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-- 353
+ ++AV+T+++F V+Y PR + F+I KY++ MN +G R KMRFE DDS E
Sbjct: 250 ATASHAVATQTLFVVYYKPRTSQ--FIISVNKYLE-AMNRFSVGMRLKMRFEGDDSAETD 306
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS 413
+R +G + G+ D+ P+ W NSKWR L V+WDE ++VSPWEI+ P ++ S
Sbjct: 307 KRFSGTIVGVEDISPH-WVNSKWRSLKVQWDEPAAVPRPDRVSPWEIE-----PFVASAS 360
Query: 414 SPRMK--KLRTGLQAPPPDYP 432
+P ++ ++T PP + P
Sbjct: 361 TPSVQPTMVKTKRPRPPSETP 381
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDV 738
RS TKV QG VGRA+DL L+GY+ L++ELE +F+++G L+ K W I++TD E D+
Sbjct: 580 RSRTKVQMQGVAVGRAVDLTMLDGYDQLINELEEMFDIKGQLQHRNK-WEIVFTDDEGDM 638
Query: 739 MVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGT 771
M+VGDDPW EFCN V +I I + ++V+KM+ G+
Sbjct: 639 MLVGDDPWPEFCNMVRRIFICSSQDVKKMSCGS 671
>gi|297850306|ref|XP_002893034.1| hypothetical protein ARALYDRAFT_335174 [Arabidopsis lyrata subsp.
lyrata]
gi|297338876|gb|EFH69293.1| hypothetical protein ARALYDRAFT_335174 [Arabidopsis lyrata subsp.
lyrata]
Length = 1096
Score = 328 bits (841), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 175/360 (48%), Positives = 229/360 (63%), Gaps = 25/360 (6%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNF-DLQPQIFCKVV 115
I +LWHACAGPL SLP G++VVYFPQGH EQVA+S +PN+ +L ++ C +
Sbjct: 20 INSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTDFIPNYPNLPSKLICLLH 79
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKT 175
V L A+ E DEVY Q+ L P + + EA D+G+ R PT+ FCKT
Sbjct: 80 SVTLHADTETDEVYAQMTLQP---VNKYDREALLASDMGLKLN---RQPTE----FFCKT 129
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
LTASDTSTHGGFSVPRRAAE FPPLD+ Q P+QE+VAKDLH W FRHIYRGQP+RH
Sbjct: 130 LTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRGQPKRH 189
Query: 236 LLTTGWSIFVSQKNLVSGDAVLFL--------------RGKDGELRLGIRRSVQPRNGLP 281
LLTTGWS+FVS K L +GD+VLF+ R + +L LGIRR+ + L
Sbjct: 190 LLTTGWSVFVSTKRLFAGDSVLFVRIGLSSSHKGTWVCRDEKSQLMLGIRRANRQTPTLS 249
Query: 282 DSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTR 341
S++S + + +L+ A+A + S F +F++PRA+ ++F++P KY K + + +G R
Sbjct: 250 SSVISSDSMHIGILAAAAHANANSSPFTIFFNPRASPSEFIVPLAKYNKALYAQVSLGMR 309
Query: 342 FKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
F+M FE +D RR G VTGI+DLDP RW S+WR L V WDE D +VS WEI+
Sbjct: 310 FRMMFETEDCGVRRYMGTVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIE 369
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 69/98 (70%), Gaps = 2/98 (2%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDP-AKGWRILY 731
+Q+ R+ TKV K+GS VGR+ID+ R +GY++L +L +F +EG L DP W+++Y
Sbjct: 962 NQTQRMRTYTKVQKRGS-VGRSIDVTRYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVY 1020
Query: 732 TDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
TD END+++VGDDPW EF N V I I + EV++M++
Sbjct: 1021 TDHENDILLVGDDPWEEFVNCVQNIKILSSVEVQQMSL 1058
>gi|302808971|ref|XP_002986179.1| hypothetical protein SELMODRAFT_182255 [Selaginella moellendorffii]
gi|300146038|gb|EFJ12710.1| hypothetical protein SELMODRAFT_182255 [Selaginella moellendorffii]
Length = 961
Score = 328 bits (840), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 172/346 (49%), Positives = 226/346 (65%), Gaps = 17/346 (4%)
Query: 61 LWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP---PIEVPNF-DLQPQIFCKVVD 116
LW CAGPL +LP G+ VVYFPQGH EQV +S+ E+PN+ +L + C + +
Sbjct: 16 LWLECAGPLVTLPTVGSHVVYFPQGHSEQVVASTTQKDGVEAEIPNYPNLPAHLICHLHN 75
Query: 117 VQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTL 176
+ L A+ + DEVY Q+ L P + E DLG+ + S FCKTL
Sbjct: 76 ITLHADPDTDEVYAQMTLQPVQN----DKEPFLTPDLGIQPKQQTLS--------FCKTL 123
Query: 177 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHL 236
TASDTSTHGGFS+PRRAAE FPPLD+ +Q P+QELVAKDLH +W FRHIYRGQPRRHL
Sbjct: 124 TASDTSTHGGFSIPRRAAEKVFPPLDFTKQPPAQELVAKDLHNQQWTFRHIYRGQPRRHL 183
Query: 237 LTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLS 296
LTTGWS+FVS K L +GD VLF+R ++ L LGIRR+ + + +P S+LS + VL+
Sbjct: 184 LTTGWSVFVSAKRLQAGDTVLFIRDENNHLLLGIRRANRQQANVPSSLLSSDSMLIGVLA 243
Query: 297 VVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERR 355
A+A +T S F +FY+PRA+ ++FV+P+ ++ K +P + +G RF+M E +DS RR
Sbjct: 244 AAAHAATTNSRFTIFYNPRASFSEFVVPFCRFSKATYHPRVTVGMRFRMELETEDSSTRR 303
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
G +TGI DLD RWPNS WR L V WDE Q++VS WEI+
Sbjct: 304 YMGTITGIGDLDSVRWPNSLWRTLKVGWDESTAGQRQKRVSLWEIE 349
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Query: 675 SPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEG-LLRDPAKG-WRILYT 732
SP + V+K GS VGR+ID+ RL Y +L ++ +FN+EG LL D + W++++
Sbjct: 822 SPMRTFTKVVYKTGS-VGRSIDVTRLKNYEELRRDIARMFNLEGQLLMDSCRSSWQLVFV 880
Query: 733 DSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
D E DV++VGDDPW EF V I I + EV+++
Sbjct: 881 DYEGDVLLVGDDPWEEFVGCVRFIKILSPSEVQQL 915
>gi|224118764|ref|XP_002331440.1| predicted protein [Populus trichocarpa]
gi|222873654|gb|EEF10785.1| predicted protein [Populus trichocarpa]
Length = 1113
Score = 328 bits (840), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 176/349 (50%), Positives = 228/349 (65%), Gaps = 13/349 (3%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASS-SAFPPIEVPNF-DLQPQIFCK 113
SI ELW ACAGPL +LP G VVYFPQGH EQVA+S ++PN+ +L ++ C
Sbjct: 22 SINPELWQACAGPLVNLPAAGTHVVYFPQGHSEQVAASLKKDVNAQIPNYPNLPSKLLCL 81
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFC 173
+ +V L A+ E DEVY Q+ L P + + +A DL + K FC
Sbjct: 82 LHNVTLHADPETDEVYVQMTLQP---VSSFDKDALLRSDLALKS-------NKPQTEFFC 131
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
KTLTASDTSTHGGFSVPRRAAE FPPLD+ Q P+QELVA+DLH W FRHIYRGQP+
Sbjct: 132 KTLTASDTSTHGGFSVPRRAAEKTFPPLDFSMQPPAQELVARDLHDNVWTFRHIYRGQPK 191
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
RHLLTTGWS+FVS K L +GD+VLF+R + +L LGIRR+ + L S+LS + +
Sbjct: 192 RHLLTTGWSLFVSGKRLFAGDSVLFMRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIG 251
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIM-NPICIGTRFKMRFEMDDSP 352
+L+ A+A + S F V+Y+PRA+ ++FVIP KY K + N I +G RF+M FE ++S
Sbjct: 252 ILAAAAHAAANNSPFTVYYNPRASPSEFVIPLAKYYKAVYSNQISLGMRFRMMFETEESG 311
Query: 353 ERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
RR G +TGI+DLD RW NS+WR L V WDE + + +VS WEI+
Sbjct: 312 TRRHMGTITGISDLDAVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIE 360
Score = 99.0 bits (245), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 70/100 (70%), Gaps = 2/100 (2%)
Query: 671 PSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRI 729
P Q R+ TKV+K+G+ VGR+ID+ R +GY++L +L F +EG L D + GW++
Sbjct: 993 PQQQFQRMRTYTKVYKRGA-VGRSIDITRYSGYDELKQDLARRFGIEGQLEDQQRIGWKL 1051
Query: 730 LYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
+YTD ENDV++VGDDPW EF N V I I + +EV++M++
Sbjct: 1052 VYTDHENDVLLVGDDPWEEFVNCVRCIKILSPQEVQQMSL 1091
>gi|30687957|ref|NP_568400.2| auxin response factor 7 [Arabidopsis thaliana]
gi|332005503|gb|AED92886.1| auxin response factor 7 [Arabidopsis thaliana]
Length = 1150
Score = 327 bits (838), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 174/348 (50%), Positives = 228/348 (65%), Gaps = 12/348 (3%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNF-DLQPQIFCKV 114
+I ELWHACAGPL SLP G++VVYFPQGH EQVA+S +P++ +L ++ C +
Sbjct: 20 NINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDFIPSYPNLPSKLICML 79
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
+V L A+ E DEVY Q+ L P + + +A D+G+ R P + FCK
Sbjct: 80 HNVTLNADPETDEVYAQMTLQP---VNKYDRDALLASDMGLKLN---RQPNE----FFCK 129
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLTASDTSTHGGFSVPRRAAE FP LD+ Q P QELVAKD+H W FRHIYRGQP+R
Sbjct: 130 TLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKR 189
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS+FVS K L +GD+VLF+R +L LGIRR+ + + L S++S + + V
Sbjct: 190 HLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGV 249
Query: 295 LSVVANAVSTKSMFHVFYSPR-ATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
L+ A+A + S F +FY+PR A A+FV+P KY K + + +G RF+M FE ++
Sbjct: 250 LAAAAHANANNSPFTIFYNPRWAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGV 309
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
RR G VTGI+DLDP RW NS+WR L + WDE D +VS W+I+
Sbjct: 310 RRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIE 357
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 67/98 (68%), Gaps = 2/98 (2%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDP-AKGWRILY 731
+Q+ R+ TKV K+GS VGR+ID+ R GY++L +L +F +EG L DP W+++Y
Sbjct: 1032 AQTQRMRTYTKVQKRGS-VGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVY 1090
Query: 732 TDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
D END+++VGDDPW EF N V I I + EV++M++
Sbjct: 1091 VDHENDILLVGDDPWEEFVNCVQSIKILSSAEVQQMSL 1128
>gi|51451357|gb|AAU03112.1| putative ETTIN-like auxin response factor [Oryza sativa Japonica
Group]
Length = 599
Score = 327 bits (838), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 180/374 (48%), Positives = 234/374 (62%), Gaps = 20/374 (5%)
Query: 169 PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPL------------DYKQQRPSQELVAKD 216
PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPL DYK RPSQEL+A D
Sbjct: 30 PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLVIHLKEKLVTFNDYKTVRPSQELIAVD 89
Query: 217 LHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQP 276
LHG +W+FRHIYRGQPRRHLLT GWS FV++K LVSGDAVLFLRG DG+LRLG+RR+VQ
Sbjct: 90 LHGTQWKFRHIYRGQPRRHLLTIGWSSFVNRKKLVSGDAVLFLRGDDGQLRLGVRRAVQL 149
Query: 277 RNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPI 336
RN ++ +S +LS VA+++ KS+FH+ ++PR+ ++F++PY + +K + +P
Sbjct: 150 RNEALFEPVNSSDSKLRILSSVASSLENKSVFHICFNPRSGASEFIVPYWRLLKSLNHPF 209
Query: 337 CIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVS 396
IG RF++ +E +D+ ER G+++GI+++DP RWP S+W+CL+VRWD+ S HQ +VS
Sbjct: 210 SIGMRFRVCYESEDANERSA-GLISGISEVDPIRWPGSRWKCLLVRWDDSTDSSHQNRVS 268
Query: 397 PWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPP--DYPVSARGGGVLDFEESVRSSKVLQ 454
PWEI+R +S+ S RT L P D P G G D + +VLQ
Sbjct: 269 PWEIERVGG--SVSVTHSLSSGSKRTKLHFPQGSLDTPF-LNGNGHPDSMGTENFHRVLQ 325
Query: 455 GQENVGFVSPLYGCDTVNHPLGFEMRAPAHQSLALNGIRKDNINELVRALPTSY--TGFV 512
GQE G S C F+ S + G R +Y GF
Sbjct: 326 GQEFRGSRSHGVVCSESPGVPNFQSPDNRRFSADMRGYMMPASGPPQRNTEFTYQPIGFS 385
Query: 513 ESNRFPKVLQGQEI 526
ES FP+VLQGQE+
Sbjct: 386 ESLGFPEVLQGQEM 399
>gi|357469307|ref|XP_003604938.1| Auxin response factor [Medicago truncatula]
gi|355505993|gb|AES87135.1| Auxin response factor [Medicago truncatula]
Length = 666
Score = 327 bits (838), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 171/353 (48%), Positives = 231/353 (65%), Gaps = 26/353 (7%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKVVDVQ 118
ELW A AGPL +P G V YFPQGH+EQ+ AS++ +P L +I C++V++
Sbjct: 19 ELWKAIAGPLVDVPCVGQSVFYFPQGHMEQLEASTNQELNQRIPVLKLPTKILCRIVNIH 78
Query: 119 LLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTP----HMFCK 174
LLA +E DEVY Q+ L+P E+ Q E D PT+ P H FCK
Sbjct: 79 LLAEQETDEVYAQITLVP---------ESNQNEPTIPD------PPTEELPRPKIHSFCK 123
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
LTASDTSTHGGFSV R+ A +C PPLD Q P+QELVAKDLHG EWRF+HI+RGQPRR
Sbjct: 124 ILTASDTSTHGGFSVLRKHATECLPPLDMSQPTPTQELVAKDLHGYEWRFKHIFRGQPRR 183
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS FV+ K LV+GD +FL G++GELR+G+RR + + +P S++S Q+ + V
Sbjct: 184 HLLTTGWSTFVTSKRLVAGDTFVFL-GENGELRVGVRRLARQSSSMPSSVISSQSMHLGV 242
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE- 353
L+ ++AV+T+++F V+Y PR + F++ KY+ + N +G RF+MRFE DDS E
Sbjct: 243 LATASHAVATQTLFVVYYKPRTSQ--FIVSVNKYLSAVSNKFAVGMRFRMRFESDDSAES 300
Query: 354 -RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS 405
+R +G + G+ D+ P+ W NSKWR L V+WDE ++VSPWEI+ VS
Sbjct: 301 DKRFSGTIVGVEDISPH-WANSKWRSLKVQWDEPSAITRPDRVSPWEIEPFVS 352
Score = 107 bits (266), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/107 (48%), Positives = 72/107 (67%), Gaps = 1/107 (0%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDV 738
RS TKV QG VGRA+DL LNGY+ L+ ELE LF+++G L+ W I++TD E D+
Sbjct: 554 RSRTKVQMQGVAVGRAVDLATLNGYDQLIGELEELFDIKGQLQH-RNTWEIVFTDDEGDM 612
Query: 739 MVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGTTDDTQSCLDQAPVI 785
M+VGDDPW EFCN V +I I + ++V+KM G+ S +++ VI
Sbjct: 613 MLVGDDPWPEFCNMVRRIFICSSQDVKKMKSGSKLPISSSIEEGTVI 659
>gi|302806481|ref|XP_002984990.1| hypothetical protein SELMODRAFT_181404 [Selaginella moellendorffii]
gi|300147200|gb|EFJ13865.1| hypothetical protein SELMODRAFT_181404 [Selaginella moellendorffii]
Length = 958
Score = 327 bits (838), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 172/346 (49%), Positives = 224/346 (64%), Gaps = 17/346 (4%)
Query: 61 LWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP---PIEVPNF-DLQPQIFCKVVD 116
LW CAGPL +LP G+ VVYFPQGH EQV +S+ E+PN+ L + C + +
Sbjct: 16 LWLECAGPLVTLPTVGSHVVYFPQGHSEQVVASTTQKDGVEAEIPNYPSLPAHLICHLHN 75
Query: 117 VQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTL 176
+ L A+ + DEVY Q+ L P + E DLG+ + S FCKTL
Sbjct: 76 ITLHADPDTDEVYAQMTLQPVQN----DKEPFLTPDLGIQPKQQTLS--------FCKTL 123
Query: 177 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHL 236
TASDTSTHGGFS+PRRAAE FPPLD+ +Q P+QELVAKDLH +W FRHIYRGQPRRHL
Sbjct: 124 TASDTSTHGGFSIPRRAAEKVFPPLDFTKQPPAQELVAKDLHNQQWTFRHIYRGQPRRHL 183
Query: 237 LTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLS 296
LTTGWS+FVS K L +GD VLF+R ++ L LGIRR+ + + +P S+LS + VL+
Sbjct: 184 LTTGWSVFVSAKRLQAGDTVLFIRDENNHLLLGIRRANRQQANVPSSLLSSDSMLIGVLA 243
Query: 297 VVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERR 355
A+A +T S F +FY+PRA+ ++FV+P+ ++ K +P + +G RF+M E +DS RR
Sbjct: 244 AAAHAATTNSRFTIFYNPRASFSEFVVPFCRFSKATYHPRVTVGMRFRMELETEDSSTRR 303
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
G +TGI DLD RWPNS WR L V WDE Q +VS WEI+
Sbjct: 304 YMGTITGIGDLDSVRWPNSLWRTLKVGWDESTAGQRQRRVSLWEIE 349
Score = 78.2 bits (191), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Query: 675 SPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEG-LLRDPAKG-WRILYT 732
SP + V+K GS VGR+ID+ RL Y +L ++ +FN+EG LL D + W++++
Sbjct: 819 SPMRTFTKVVYKTGS-VGRSIDVTRLKNYEELRRDIARMFNLEGQLLMDSCRSSWQLVFV 877
Query: 733 DSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
D E DV++VGDDPW EF V I I + EV+++
Sbjct: 878 DYEGDVLLVGDDPWEEFVGCVRFIKILSPSEVQQL 912
>gi|297812257|ref|XP_002874012.1| hypothetical protein ARALYDRAFT_488981 [Arabidopsis lyrata subsp.
lyrata]
gi|297319849|gb|EFH50271.1| hypothetical protein ARALYDRAFT_488981 [Arabidopsis lyrata subsp.
lyrata]
Length = 1168
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 174/348 (50%), Positives = 228/348 (65%), Gaps = 12/348 (3%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNF-DLQPQIFCKV 114
+I ELWHACAGPL SLP G++VVYFPQGH EQVA+S +P++ +L ++ C +
Sbjct: 20 NINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDFIPSYPNLPSKLICML 79
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
+V L A+ E DEVY Q+ L P + + +A D+G+ R P + FCK
Sbjct: 80 HNVTLNADPETDEVYAQMTLQP---VNKYDRDALLASDMGLKLN---RQPNE----FFCK 129
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLTASDTSTHGGFSVPRRAAE FP LD+ Q P QELVAKD+H W FRHIYRGQP+R
Sbjct: 130 TLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKR 189
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS+FVS K L +GD+VLF+R +L LGIRR+ + + L S++S + + V
Sbjct: 190 HLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGV 249
Query: 295 LSVVANAVSTKSMFHVFYSPR-ATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
L+ A+A + S F +FY+PR A A+FV+P KY K + + +G RF+M FE ++
Sbjct: 250 LAAAAHANANNSPFTIFYNPRWAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGV 309
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
RR G VTGI+DLDP RW NS+WR L + WDE D +VS W+I+
Sbjct: 310 RRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIE 357
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 66/98 (67%), Gaps = 2/98 (2%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDP-AKGWRILY 731
+Q+ R+ TKV ++GS VGR+ID+ R GY++L +L +F +EG L DP W+++Y
Sbjct: 1035 AQTQRMRTYTKVQERGS-VGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVY 1093
Query: 732 TDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
D E D+++VGDDPW EF N V + I + EV++M++
Sbjct: 1094 VDHETDILLVGDDPWEEFVNFVQSLKILSSAEVQQMSL 1131
>gi|30687943|ref|NP_851046.1| auxin response factor 7 [Arabidopsis thaliana]
gi|8071650|gb|AAF71831.1|AF186466_1 non-phototropic hypocotyl 4 [Arabidopsis thaliana]
gi|332005501|gb|AED92884.1| auxin response factor 7 [Arabidopsis thaliana]
Length = 1165
Score = 327 bits (837), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 174/348 (50%), Positives = 228/348 (65%), Gaps = 12/348 (3%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNF-DLQPQIFCKV 114
+I ELWHACAGPL SLP G++VVYFPQGH EQVA+S +P++ +L ++ C +
Sbjct: 20 NINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDFIPSYPNLPSKLICML 79
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
+V L A+ E DEVY Q+ L P + + +A D+G+ R P + FCK
Sbjct: 80 HNVTLNADPETDEVYAQMTLQP---VNKYDRDALLASDMGLKLN---RQPNE----FFCK 129
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLTASDTSTHGGFSVPRRAAE FP LD+ Q P QELVAKD+H W FRHIYRGQP+R
Sbjct: 130 TLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKR 189
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS+FVS K L +GD+VLF+R +L LGIRR+ + + L S++S + + V
Sbjct: 190 HLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGV 249
Query: 295 LSVVANAVSTKSMFHVFYSPR-ATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
L+ A+A + S F +FY+PR A A+FV+P KY K + + +G RF+M FE ++
Sbjct: 250 LAAAAHANANNSPFTIFYNPRWAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGV 309
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
RR G VTGI+DLDP RW NS+WR L + WDE D +VS W+I+
Sbjct: 310 RRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIE 357
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 67/98 (68%), Gaps = 2/98 (2%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDP-AKGWRILY 731
+Q+ R+ TKV K+GS VGR+ID+ R GY++L +L +F +EG L DP W+++Y
Sbjct: 1032 AQTQRMRTYTKVQKRGS-VGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVY 1090
Query: 732 TDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
D END+++VGDDPW EF N V I I + EV++M++
Sbjct: 1091 VDHENDILLVGDDPWEEFVNCVQSIKILSSAEVQQMSL 1128
>gi|326501930|dbj|BAK06457.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 763
Score = 326 bits (836), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 167/371 (45%), Positives = 235/371 (63%), Gaps = 17/371 (4%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVA--SSSAFPPIEVPNFDLQPQIFCKV 114
++ ELW ACAGPL +P++G V YF QGHLEQ+ + SA ++ F + +I CKV
Sbjct: 70 LFAELWRACAGPLVEVPQRGERVFYFLQGHLEQLQEPTDSALLAEQIKMFQVPYKILCKV 129
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
V+V+L A E DEVY Q+ L P + L L + D + E + H FCK
Sbjct: 130 VNVELKAETETDEVYAQITLQPDADQSDLPL----ILDPTLPET------PRPVVHTFCK 179
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
LT SDTSTHGGFSV RR A +C PPLD P+QE+++KDLHG EWRF+HIYRGQPRR
Sbjct: 180 ILTPSDTSTHGGFSVLRRHANECLPPLDMTMPTPTQEIISKDLHGSEWRFKHIYRGQPRR 239
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS FV+ K L++GDA ++LR + GE R+G+RR VQ ++ +P S++S Q+ + V
Sbjct: 240 HLLTTGWSTFVTSKKLMAGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGV 299
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
L+ ++A+ T S+F V+Y PR + + +++ KY +G RF+M FE +D P +
Sbjct: 300 LASASHAIKTNSIFVVYYRPRLSQSQYIVSVNKYHLASKTGFTVGMRFRMNFEAEDVPVK 359
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIG-SDHQEQVSPWEIDRS-VSLPPLS-- 410
+ G + G D P +W S+W+ L V+WD+ + + E+VSPWEID S VS P +S
Sbjct: 360 KFFGTIVGDGDFSP-QWSGSEWKSLKVQWDDSVAICNGPERVSPWEIDSSDVSSPAISTL 418
Query: 411 IQSSPRMKKLR 421
+QSS + K+ R
Sbjct: 419 LQSSAKNKRPR 429
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 58/96 (60%), Gaps = 4/96 (4%)
Query: 672 SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILY 731
S QS R+ KV G+ VGRA+DL L+GY L +ELE +F ++D + +++ +
Sbjct: 652 SQQSSIGRNRVKVQMHGNAVGRAVDLASLDGYERLTNELEQMFE----IKDIKQNFKVAF 707
Query: 732 TDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
D+E D M VGDDPW EFC V KI IY E+ + M
Sbjct: 708 NDNEGDTMKVGDDPWMEFCRMVRKIVIYPIEDDKNM 743
>gi|356496641|ref|XP_003517174.1| PREDICTED: auxin response factor 6-like [Glycine max]
Length = 1104
Score = 325 bits (833), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 176/350 (50%), Positives = 232/350 (66%), Gaps = 13/350 (3%)
Query: 55 SSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASS-SAFPPIEVPNF-DLQPQIFC 112
SSI ELWHACAGPL LP G V+YFPQGH EQV++S + ++PN+ +L ++ C
Sbjct: 5 SSIKAELWHACAGPLVKLPPSGTHVIYFPQGHSEQVSASLNRDVHSQIPNYPNLPSKLLC 64
Query: 113 KVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMF 172
+ + L A+ + D+VY Q+ L P P + +A DL ++ TK P F
Sbjct: 65 LLHTLTLHADPQTDQVYAQITLQPLPSFDK---DALLRSDLALES-------TKPPPDFF 114
Query: 173 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQP 232
CK LTASDTSTHGGFSVPRRAAE FPPLDY Q P+QELVA+DLH W+FRHIYRGQP
Sbjct: 115 CKQLTASDTSTHGGFSVPRRAAEKIFPPLDYSMQPPAQELVARDLHDTVWKFRHIYRGQP 174
Query: 233 RRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYP 292
+RHLLTTGWS+FVS K L +GD+VLF+R + +L LGIRR+ + + S+LS + +
Sbjct: 175 KRHLLTTGWSLFVSGKRLFAGDSVLFIRDEKQQLLLGIRRANRQPTNISSSVLSSDSMHI 234
Query: 293 NVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVK-IIMNPICIGTRFKMRFEMDDS 351
+L+ A+A + S F VFY+PRA+ ++FVIP KY K + + +G RF+M FE +DS
Sbjct: 235 GILAAAAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKSVYSHQPSLGMRFRMMFETEDS 294
Query: 352 PERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
RR G VTGI+DLDP +W NS+WR L V WDE + + +VS WEI+
Sbjct: 295 GTRRHMGTVTGISDLDPVQWKNSQWRNLQVGWDESTAGEKRSRVSIWEIE 344
Score = 91.7 bits (226), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 66/92 (71%), Gaps = 2/92 (2%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSEND 737
R+ TKV+K+G+ VGR+ID+ R +GY +L +L F +EG L D + GW+++Y D E+D
Sbjct: 992 RTYTKVYKRGA-VGRSIDITRYSGYEELKQDLARRFGIEGQLEDRQRIGWKLVYVDHESD 1050
Query: 738 VMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
V+++GDDPW EF N V I I + +EV++M++
Sbjct: 1051 VLLLGDDPWEEFVNCVRCIKILSPQEVQQMSL 1082
>gi|326529041|dbj|BAK00914.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1176
Score = 325 bits (832), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 169/349 (48%), Positives = 229/349 (65%), Gaps = 13/349 (3%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASS-SAFPPIEVPNF-DLQPQIFCK 113
+I +LWHACAGPL LP G++VVYFPQGH EQVA+S VPN+ +L ++ C
Sbjct: 38 AINSDLWHACAGPLVQLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPNYPNLPSKLICL 97
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFC 173
+ ++ L A+ E DEVY ++ L P + EA QL +L + + + FC
Sbjct: 98 LHNITLHADLETDEVYARMTLQP---VTSYGKEALQLSELALKQ-------ARPQNEFFC 147
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
KTLTASDTSTHGGFSVPRR+AE FPPLD+ Q P+QE+ A+DLH W FRHIYRGQP+
Sbjct: 148 KTLTASDTSTHGGFSVPRRSAEKIFPPLDFSMQPPAQEIQARDLHDNVWTFRHIYRGQPK 207
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
RHLLTTGWS+FVS K L +GD+V+F+R + +L LGIRR+ + + S+LS + +
Sbjct: 208 RHLLTTGWSLFVSGKRLFAGDSVIFVRDERQQLLLGIRRANRQPTNISSSVLSSDSMHIG 267
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIM-NPICIGTRFKMRFEMDDSP 352
+L+ A+A + S F +FY+PRA+ +FVIP+ KY K + N + +G RF+M FE ++
Sbjct: 268 ILAAAAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEELG 327
Query: 353 ERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
RR G +TGI DLDP RW NS+WR L V WDE + + +VS WEI+
Sbjct: 328 TRRYMGTITGINDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIE 376
Score = 90.1 bits (222), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 3/124 (2%)
Query: 647 DGSFNGTAAGCKLFGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDL 706
D +FN +G F S P P+ R+ TKV+K+G+ VGR+ID+ + GY +L
Sbjct: 1011 DMAFNSIDSGINDGTFLNRSSWP-PAPPVKRMRTFTKVYKRGA-VGRSIDISQYAGYEEL 1068
Query: 707 LSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVE 765
L +F++EG L + + GW+++Y D E+D++++GDDPW EF N V I I + +EV+
Sbjct: 1069 KQALARMFSIEGQLEERQRIGWKLVYRDHEDDILLLGDDPWEEFVNCVKCIRILSPQEVQ 1128
Query: 766 KMTI 769
+M++
Sbjct: 1129 QMSL 1132
>gi|326498543|dbj|BAJ98699.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1176
Score = 325 bits (832), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 169/349 (48%), Positives = 229/349 (65%), Gaps = 13/349 (3%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASS-SAFPPIEVPNF-DLQPQIFCK 113
+I +LWHACAGPL LP G++VVYFPQGH EQVA+S VPN+ +L ++ C
Sbjct: 38 AINSDLWHACAGPLVQLPPAGSLVVYFPQGHSEQVAASMQKDVDAHVPNYPNLPSKLICL 97
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFC 173
+ ++ L A+ E DEVY ++ L P + EA QL +L + + + FC
Sbjct: 98 LHNITLHADLETDEVYARMTLQP---VTSYGKEALQLSELALKQ-------ARPQNEFFC 147
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
KTLTASDTSTHGGFSVPRR+AE FPPLD+ Q P+QE+ A+DLH W FRHIYRGQP+
Sbjct: 148 KTLTASDTSTHGGFSVPRRSAEKIFPPLDFSMQPPAQEIQARDLHDNVWTFRHIYRGQPK 207
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
RHLLTTGWS+FVS K L +GD+V+F+R + +L LGIRR+ + + S+LS + +
Sbjct: 208 RHLLTTGWSLFVSGKRLFAGDSVIFVRDERQQLLLGIRRANRQPTNISSSVLSSDSMHIG 267
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIM-NPICIGTRFKMRFEMDDSP 352
+L+ A+A + S F +FY+PRA+ +FVIP+ KY K + N + +G RF+M FE ++
Sbjct: 268 ILAAAAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEELG 327
Query: 353 ERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
RR G +TGI DLDP RW NS+WR L V WDE + + +VS WEI+
Sbjct: 328 TRRYMGTITGINDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIE 376
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 77/124 (62%), Gaps = 3/124 (2%)
Query: 647 DGSFNGTAAGCKLFGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDL 706
D +FN +G F S P P+ R+ TKV+K+G+ VGR+ID+ + GY +L
Sbjct: 1011 DMAFNSIDSGINDGTFLNRSSWP-PAPPVKRMRTFTKVYKRGA-VGRSIDISQYAGYEEL 1068
Query: 707 LSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVE 765
L +F++EG L + + GW+++Y D E+D++++GDDPW EF N V I I + +EV+
Sbjct: 1069 KQALARMFSIEGQLEERQRIGWKLVYRDHEDDILLLGDDPWEEFVNCVKCIRILSPQEVQ 1128
Query: 766 KMTI 769
+M++
Sbjct: 1129 QMSL 1132
>gi|242082191|ref|XP_002445864.1| hypothetical protein SORBIDRAFT_07g027080 [Sorghum bicolor]
gi|241942214|gb|EES15359.1| hypothetical protein SORBIDRAFT_07g027080 [Sorghum bicolor]
Length = 1095
Score = 325 bits (832), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 172/365 (47%), Positives = 238/365 (65%), Gaps = 12/365 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASS-SAFPPIEVPNF-DLQPQIFCKVVDV 117
ELW+ACAGPL +LP G++VVYFPQGH EQVA+S ++P++ +L ++ C + V
Sbjct: 27 ELWYACAGPLVTLPPAGSLVVYFPQGHSEQVAASMRKDADAKIPSYPNLPSKLICILRSV 86
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+LA+ + DEVY ++ L P + + E DL + + T+ FCKTLT
Sbjct: 87 TMLADPDTDEVYARMTLQPVSNVTHCDKETLLASDLALKQ-------TRPQTEFFCKTLT 139
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FP LD+ Q P+QEL A+DLH W FRHIYRGQP+RHLL
Sbjct: 140 ASDTSTHGGFSVPRRAAERIFPHLDFSMQPPAQELQARDLHDAIWTFRHIYRGQPKRHLL 199
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K L++GD+VLF+R +L LGIRR+ + L S+LS + + +L+
Sbjct: 200 TTGWSLFVSGKRLLAGDSVLFIRDGRQQLLLGIRRANRQPVNLSSSVLSSDSMHIGILAA 259
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIM-NPICIGTRFKMRFEMDDSPERRC 356
A+A + S F VFY+PRA+ ++FVIP+ KY K + N + +G RF+M FE ++S RR
Sbjct: 260 AAHAAANNSQFTVFYNPRASPSEFVIPFAKYQKAVYSNQLSLGMRFRMMFETEESATRRY 319
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPR 416
G +TGI+D+DP RW NS+WR + V WDE ++ + +VS WE++ ++ P I SP
Sbjct: 320 MGTITGISDMDPVRWKNSQWRNIQVAWDEAAPTERRTRVSLWEVEPVIA--PFFIYPSPL 377
Query: 417 MKKLR 421
R
Sbjct: 378 FTAKR 382
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/127 (37%), Positives = 76/127 (59%), Gaps = 5/127 (3%)
Query: 647 DGSFNGTAAGCKLFGF-SLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYND 705
D +FN + F + S P P+ Q R+ TKVHK+G+ VGR+ID+ R +GY++
Sbjct: 946 DIAFNSIDSSINDIPFLNRNSRAPGPAHQR--IRTYTKVHKRGA-VGRSIDINRYSGYDE 1002
Query: 706 LLSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEV 764
L ++ +F +EG L D + W+++Y D E DV++VGDDPW +F N V I I + +E
Sbjct: 1003 LKHDIARMFGIEGQLSDQNRVCWKLVYEDHEKDVLLVGDDPWEDFVNCVRCIRILSPQEE 1062
Query: 765 EKMTIGT 771
+M + +
Sbjct: 1063 RQMRLAS 1069
>gi|158563961|sp|Q6Z2W3.2|ARFE_ORYSJ RecName: Full=Auxin response factor 5
Length = 1142
Score = 325 bits (832), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 174/353 (49%), Positives = 233/353 (66%), Gaps = 17/353 (4%)
Query: 54 SSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASS-SAFPPIEVPNF-DLQPQIF 111
+++I ELWHACAGPL SLP G++VVYFPQGH EQVA+S VP++ +L ++
Sbjct: 38 AAAINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLI 97
Query: 112 CKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHM 171
C + V L A+ + DEVY Q+ L P + EA Q+ +L + + + P M
Sbjct: 98 CLLHGVNLHADPDTDEVYAQMTLQP---VNTYGKEALQISELALKQ---------ARPQM 145
Query: 172 --FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
FCKTLTASDTSTHGGFSVPRRAAE FPPLD+ Q P+QEL A+D+H W FRHIYR
Sbjct: 146 EFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDIHDNVWTFRHIYR 205
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQN 289
GQP+RHLLTTGWS+FVS K L +GD+V+ +R + +L LGIRR+ + + S+LS +
Sbjct: 206 GQPKRHLLTTGWSLFVSGKRLFAGDSVIVVRDEKHQLLLGIRRANRQPTNISSSVLSSDS 265
Query: 290 SYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIM-NPICIGTRFKMRFEM 348
+ VL+ A+A + S F +FY+PRA+ +FVIP+ KY K + N I +G RF+M FE
Sbjct: 266 MHIGVLAAAAHAAANSSPFTIFYNPRASPTEFVIPFAKYQKALYSNQISLGMRFRMMFET 325
Query: 349 DDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
++ RR G +TGI+DLDP RW NS+WR L V WDE + + +VS WEI+
Sbjct: 326 EELGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIE 378
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 66/92 (71%), Gaps = 2/92 (2%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSEND 737
R+ TKV+K+G+ VGR+ID+ R +GY +L L +F +EG L D + GW+++Y D E+D
Sbjct: 1009 RTFTKVYKRGA-VGRSIDIGRYSGYEELKHALARMFGIEGQLEDRQRIGWKLVYKDHEDD 1067
Query: 738 VMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
++++GDDPW EF N V I I + +EV++M++
Sbjct: 1068 ILLLGDDPWEEFVNCVRCIRILSPQEVQQMSL 1099
>gi|42409013|dbj|BAD10267.1| putative auxin response factor 7a [Oryza sativa Japonica Group]
Length = 1139
Score = 324 bits (831), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 174/353 (49%), Positives = 233/353 (66%), Gaps = 17/353 (4%)
Query: 54 SSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASS-SAFPPIEVPNF-DLQPQIF 111
+++I ELWHACAGPL SLP G++VVYFPQGH EQVA+S VP++ +L ++
Sbjct: 35 AAAINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDVDAHVPSYPNLPSKLI 94
Query: 112 CKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHM 171
C + V L A+ + DEVY Q+ L P + EA Q+ +L + + + P M
Sbjct: 95 CLLHGVNLHADPDTDEVYAQMTLQP---VNTYGKEALQISELALKQ---------ARPQM 142
Query: 172 --FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
FCKTLTASDTSTHGGFSVPRRAAE FPPLD+ Q P+QEL A+D+H W FRHIYR
Sbjct: 143 EFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDIHDNVWTFRHIYR 202
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQN 289
GQP+RHLLTTGWS+FVS K L +GD+V+ +R + +L LGIRR+ + + S+LS +
Sbjct: 203 GQPKRHLLTTGWSLFVSGKRLFAGDSVIVVRDEKHQLLLGIRRANRQPTNISSSVLSSDS 262
Query: 290 SYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIM-NPICIGTRFKMRFEM 348
+ VL+ A+A + S F +FY+PRA+ +FVIP+ KY K + N I +G RF+M FE
Sbjct: 263 MHIGVLAAAAHAAANSSPFTIFYNPRASPTEFVIPFAKYQKALYSNQISLGMRFRMMFET 322
Query: 349 DDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
++ RR G +TGI+DLDP RW NS+WR L V WDE + + +VS WEI+
Sbjct: 323 EELGTRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSIWEIE 375
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 66/92 (71%), Gaps = 2/92 (2%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSEND 737
R+ TKV+K+G+ VGR+ID+ R +GY +L L +F +EG L D + GW+++Y D E+D
Sbjct: 1006 RTFTKVYKRGA-VGRSIDIGRYSGYEELKHALARMFGIEGQLEDRQRIGWKLVYKDHEDD 1064
Query: 738 VMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
++++GDDPW EF N V I I + +EV++M++
Sbjct: 1065 ILLLGDDPWEEFVNCVRCIRILSPQEVQQMSL 1096
>gi|4103243|gb|AAD04807.1| BIPOSTO [Arabidopsis thaliana]
Length = 1165
Score = 324 bits (831), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 173/348 (49%), Positives = 226/348 (64%), Gaps = 12/348 (3%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNF-DLQPQIFCKV 114
+I ELWHACAGPL SLP G++VVYFPQGH EQVA+S +P++ +L ++ C +
Sbjct: 20 NINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDFIPSYPNLPSKLICML 79
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
+V L A+ E DEVY Q+ L P + + A D+G+ R P + FCK
Sbjct: 80 HNVTLNADPETDEVYAQMTLQP---VNKYDRNALLASDMGLKLN---RQPNE----FFCK 129
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLTASDTSTHGGFSVPRRAAE FP LD+ Q P QELVAKD+H W FRHIYRGQP+R
Sbjct: 130 TLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRGQPKR 189
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS+FVS K +GD+VLF+R +L LGIRR+ + + L S++S + + V
Sbjct: 190 HLLTTGWSVFVSTKRFFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSMHIGV 249
Query: 295 LSVVANAVSTKSMFHVFYSPR-ATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
L+ A+A + S F +FY+PR A A+FV+P KY K + + +G RF+M FE ++
Sbjct: 250 LAAAAHANANNSPFTIFYNPRWAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEECGV 309
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
RR G VTGI+DLDP RW NS+WR L + WDE D +VS W+I+
Sbjct: 310 RRYMGTVTGISDLDPVRWENSQWRNLQIGWDESAAGDRPSRVSVWDIE 357
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 67/98 (68%), Gaps = 2/98 (2%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDP-AKGWRILY 731
+Q+ R+ TKV K+GS VGR+ID+ R GY++L +L +F +EG L DP W+++Y
Sbjct: 1032 AQTQRMRTYTKVQKRGS-VGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVY 1090
Query: 732 TDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
D END+++VGDDPW EF N V I I + EV++M++
Sbjct: 1091 VDHENDILLVGDDPWEEFVNCVQSIKILSSAEVQQMSL 1128
>gi|19352053|dbj|BAB85920.1| auxin response factor 16 [Oryza sativa]
Length = 695
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 161/370 (43%), Positives = 226/370 (61%), Gaps = 16/370 (4%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSS--AFPPIEVPNFDLQPQIFCKV 114
++ ELW ACAGPL +P++ V YF QGHLEQ+ + A ++ F + +I CKV
Sbjct: 11 LFAELWRACAGPLVEVPQRDERVFYFLQGHLEQLQEPTDPALLAEQIKMFQVPYKILCKV 70
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
V+V+L A E DEV+ Q+ L P P+ E L + H FCK
Sbjct: 71 VNVELKAETETDEVFAQITLQPDPDQENLPTLPDPPL----------PEQPRPVVHSFCK 120
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
LT SDTSTHGGFSV RR A +C PPLD P+QEL+ KDLHG EWRF+HIYRGQPRR
Sbjct: 121 ILTPSDTSTHGGFSVLRRHANECLPPLDMSMATPTQELITKDLHGSEWRFKHIYRGQPRR 180
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS FV+ K L+SGDA ++LR + GE R+G+RR VQ ++ +P S++S Q+ + V
Sbjct: 181 HLLTTGWSTFVTSKKLISGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGV 240
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
L+ ++A+ T S+F V+Y PR + + +++ KY+ +G RFKM FE +D P +
Sbjct: 241 LASASHAIKTNSIFLVYYRPRLSQSQYIVSVNKYLAASKVGFNVGMRFKMSFEGEDVPVK 300
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPP---LSI 411
+ +G + G DL +W S+W+ L V+WDE + E+VSPWEI+ P + +
Sbjct: 301 KFSGTIVGEGDLS-LQWSGSEWKSLKVQWDEVTNVNGPERVSPWEIETCDGTAPAINVPL 359
Query: 412 QSSPRMKKLR 421
QS+ + K+ R
Sbjct: 360 QSATKNKRPR 369
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
Query: 672 SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILY 731
S Q+ R+ KV G+ VGRA+DL L+GY L++ELE +FN ++D + W++ +
Sbjct: 584 SHQNYTARTRIKVQMHGNAVGRAVDLANLDGYEQLMNELEEMFN----IKDLKQKWKVAF 639
Query: 732 TDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
TD E D M VGDDPW EFC V KI +Y E+ +K+
Sbjct: 640 TDDEGDTMEVGDDPWLEFCQMVRKIVLYPIEDEKKI 675
>gi|414584937|tpg|DAA35508.1| TPA: hypothetical protein ZEAMMB73_047841 [Zea mays]
Length = 935
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 165/347 (47%), Positives = 221/347 (63%), Gaps = 13/347 (3%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSA-FPPIEVPNF-DLQPQIFCKV 114
I ELWHACAGPL LP++G++V YFPQGH EQVA+++ P +PN+ L Q+ C+V
Sbjct: 37 INSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKIPNSRIPNYPSLPSQLLCQV 96
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
++ L A+KE DE+Y Q+ L P D+ G + +K FCK
Sbjct: 97 HNITLHADKETDEIYAQMTLQP----------VHSETDVFPIPTLGAYTKSKHPSEYFCK 146
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
LTASDTSTHGGFSVPRRAAE FP LDY Q P+QEL+ +DLH W FRHIYR QP+R
Sbjct: 147 NLTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYR-QPKR 205
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS+FV K L +GD+VLF+R + +L +G+RR+ + + L S+LS + + V
Sbjct: 206 HLLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATRQQPALSSSVLSTDSMHIGV 265
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
L+ A+A S+ F V+Y+PR + + FVIP +Y +G RF M FE ++S +R
Sbjct: 266 LAAAAHAASSGGSFTVYYNPRTSPSPFVIPLARYNMATYLQPSVGMRFAMMFETEESSKR 325
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
RC G + GI+D +P RWPNSKWR L V WDE + E+VS W+I+
Sbjct: 326 RCTGTIVGISDYEPMRWPNSKWRNLQVEWDEHGYGERPERVSLWDIE 372
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 63/108 (58%), Gaps = 2/108 (1%)
Query: 676 PGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKG-WRILYTDS 734
P R+ TKV K GS VGR+ID+ R Y++L S + +F ++G L P W+++Y D
Sbjct: 829 PPVRTYTKVQKLGS-VGRSIDVTRFRDYHELRSAIACMFGLQGKLEHPGSSDWKLVYVDY 887
Query: 735 ENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGTTDDTQSCLDQA 782
ENDV++VGDDPW EF N V I I EV++M+ C+ A
Sbjct: 888 ENDVLLVGDDPWEEFINCVRCIRILAPSEVQQMSENGVHVLNDCMQMA 935
>gi|226491161|ref|NP_001142391.1| uncharacterized protein LOC100274564 [Zea mays]
gi|223975541|gb|ACN31958.1| unknown [Zea mays]
Length = 766
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 162/330 (49%), Positives = 220/330 (66%), Gaps = 13/330 (3%)
Query: 104 FDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRS 163
+DL +I C+V++V+L A +NDEVY Q+ LLP+ + E+ G EE
Sbjct: 4 YDLPWKILCEVMNVELKAEPDNDEVYAQLTLLPE----------SKPEENGSSEEMPASP 53
Query: 164 PT---KSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGV 220
P + H FCKTLTASDTSTHGGFSV RR A++C PPLD +Q P+QELVAKDLHGV
Sbjct: 54 PAALARPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMTRQPPTQELVAKDLHGV 113
Query: 221 EWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGL 280
EWRFRHI+RGQPRRHLL +GWS+FVS K LV+GDA +FLRG GELR+G+RR+++ + +
Sbjct: 114 EWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGDSGELRVGVRRAMRQQANV 173
Query: 281 PDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGT 340
P S++S + + VL+ +AV+T +MF V+Y PR + A+FV+P +Y++ + IG
Sbjct: 174 PSSVISSHSMHLGVLATAWHAVNTGTMFTVYYKPRTSPAEFVVPCDRYMESLKRNYPIGM 233
Query: 341 RFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEI 400
RFKMRFE +++PE+R G + G D D W SKWR L VRWDE E+VSPW+I
Sbjct: 234 RFKMRFEGEEAPEQRFTGTIVGNVDPDQAGWAESKWRYLKVRWDEASSIPRPERVSPWQI 293
Query: 401 DRSVSLPPLSIQSSPRMKKLRTGLQAPPPD 430
+ +VS PP++ R K+ R+ A P+
Sbjct: 294 EPAVSPPPINPLPVHRPKRPRSNAVASLPE 323
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 73/99 (73%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYT 732
SQ RSC KVHKQG +GR++DL + NGY +L++EL+ +F+ G L+ +K W ++YT
Sbjct: 627 SQGGSTRSCKKVHKQGMALGRSVDLTKFNGYTELVAELDEMFDFNGELKGCSKEWMVVYT 686
Query: 733 DSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGT 771
D E D+M+VGDDPW+EFC+ V KI +YT+EEV++M G
Sbjct: 687 DYEGDMMLVGDDPWNEFCSMVHKIFVYTREEVQRMNPGA 725
>gi|115435540|ref|NP_001042528.1| Os01g0236300 [Oryza sativa Japonica Group]
gi|75251164|sp|Q5NB85.1|ARFA_ORYSJ RecName: Full=Auxin response factor 1; AltName: Full=OsARF16
gi|56783859|dbj|BAD81271.1| putative auxin response factor 20 [Oryza sativa Japonica Group]
gi|113532059|dbj|BAF04442.1| Os01g0236300 [Oryza sativa Japonica Group]
gi|213959154|gb|ACJ54911.1| auxin response factor [Oryza sativa Japonica Group]
gi|215734875|dbj|BAG95597.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 699
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 161/370 (43%), Positives = 226/370 (61%), Gaps = 16/370 (4%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSS--AFPPIEVPNFDLQPQIFCKV 114
++ ELW ACAGPL +P++ V YF QGHLEQ+ + A ++ F + +I CKV
Sbjct: 15 LFAELWRACAGPLVEVPQRDERVFYFLQGHLEQLQEPTDPALLAEQIKMFQVPYKILCKV 74
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
V+V+L A E DEV+ Q+ L P P+ E L + H FCK
Sbjct: 75 VNVELKAETETDEVFAQITLQPDPDQENLPTLPDPPL----------PEQPRPVVHSFCK 124
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
LT SDTSTHGGFSV RR A +C PPLD P+QEL+ KDLHG EWRF+HIYRGQPRR
Sbjct: 125 ILTPSDTSTHGGFSVLRRHANECLPPLDMSMATPTQELITKDLHGSEWRFKHIYRGQPRR 184
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS FV+ K L+SGDA ++LR + GE R+G+RR VQ ++ +P S++S Q+ + V
Sbjct: 185 HLLTTGWSTFVTSKKLISGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGV 244
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
L+ ++A+ T S+F V+Y PR + + +++ KY+ +G RFKM FE +D P +
Sbjct: 245 LASASHAIKTNSIFLVYYRPRLSQSQYIVSVNKYLAASKVGFNVGMRFKMSFEGEDVPVK 304
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPP---LSI 411
+ +G + G DL +W S+W+ L V+WDE + E+VSPWEI+ P + +
Sbjct: 305 KFSGTIVGEGDLS-LQWSGSEWKSLKVQWDEVTNVNGPERVSPWEIETCDGTAPAINVPL 363
Query: 412 QSSPRMKKLR 421
QS+ + K+ R
Sbjct: 364 QSATKNKRPR 373
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
Query: 672 SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILY 731
S Q+ R+ KV G+ VGRA+DL L+GY L++ELE +FN ++D + W++ +
Sbjct: 588 SHQNYTARTRIKVQMHGNAVGRAVDLANLDGYEQLMNELEEMFN----IKDLKQKWKVAF 643
Query: 732 TDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
TD E D M VGDDPW EFC V KI +Y E+ +K+
Sbjct: 644 TDDEGDTMEVGDDPWLEFCQMVRKIVLYPIEDEKKI 679
>gi|356527714|ref|XP_003532453.1| PREDICTED: auxin response factor 25-like [Glycine max]
Length = 1113
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 187/380 (49%), Positives = 238/380 (62%), Gaps = 15/380 (3%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASS-SAFPPIEVPNF-DLQPQIFCK 113
SI ELW ACAGPL +LP G VVYFPQGH EQVA+S +VPN+ +L +I C
Sbjct: 24 SINAELWQACAGPLLNLPSPGTHVVYFPQGHSEQVAASLKKDVDAQVPNYTNLPSKIPCL 83
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFC 173
+ +V L A+ + DEVY Q+AL P P + +A D+ + +K P FC
Sbjct: 84 LHNVTLHADPDTDEVYAQMALRPVPSFD---TDALLRSDISLKL-------SKPQPEFFC 133
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
K LTASDTSTHGGFSVPRRAAE FPPLDY Q P QELVA+DLH WRFRHIYRG+P+
Sbjct: 134 KQLTASDTSTHGGFSVPRRAAEKIFPPLDYSLQSPVQELVARDLHDNVWRFRHIYRGKPK 193
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
RHLLTTGWS+F+S K L++GD+VLF+R + +L LGIRR+ + + L S+LS + +
Sbjct: 194 RHLLTTGWSLFISGKRLLAGDSVLFVRDEKQQLLLGIRRANRQPSNLSSSVLSSDSMHIG 253
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIM-NPICIGTRFKMRFEMDDSP 352
VL+ A AV+ S F VFY+PRA+ ++FVIP KY K + + I G F+M FE +DS
Sbjct: 254 VLAAAAQAVANNSPFTVFYNPRASPSEFVIPLAKYYKAVYSHHISPGMHFRMTFETEDSG 313
Query: 353 ERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQ 412
RR G + G++DLD RW NS WR L V WDE D + +VS WEI+ + P I
Sbjct: 314 TRRYMGTIIGVSDLDSVRWKNSLWRNLQVGWDESTAEDRRSRVSVWEIEPVTT--PYFIC 371
Query: 413 SSPRMKKLRTGLQAPPPDYP 432
P + R L P D P
Sbjct: 372 PPPFFRSKRPRLLGMPDDEP 391
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 66/92 (71%), Gaps = 2/92 (2%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSEND 737
R+ TKV+K+G+ VGR+ID+ R +GY +L +L F +EG L D + GW+++Y D END
Sbjct: 1001 RTYTKVYKRGA-VGRSIDITRYSGYEELKQDLALKFGIEGQLEDRERIGWKLVYVDHEND 1059
Query: 738 VMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
V++VGDDPW EF N V I I + +EV++M++
Sbjct: 1060 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMSL 1091
>gi|242055813|ref|XP_002457052.1| hypothetical protein SORBIDRAFT_03g000530 [Sorghum bicolor]
gi|241929027|gb|EES02172.1| hypothetical protein SORBIDRAFT_03g000530 [Sorghum bicolor]
Length = 688
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 162/368 (44%), Positives = 229/368 (62%), Gaps = 14/368 (3%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSS--AFPPIEVPNFDLQPQIFCKV 114
++ ELW ACAGPL LP+ V YF QGHLEQ+ + A ++ F + +I CKV
Sbjct: 9 LFAELWRACAGPLVELPQTDERVFYFLQGHLEQLQEPTDPALLADQIKMFQVPNKILCKV 68
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
V+V+L A E DE+Y Q+ L P+P+ Q++ + + + ++ H FCK
Sbjct: 69 VNVELKAETETDEMYAQITLQPEPD---------QMDLPTLPDPPLPET-SRPVVHSFCK 118
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
LT SDTSTHGGFSV RR A +C PPLD P+QEL+ KDLHG EWRF+HIYRGQPRR
Sbjct: 119 ILTPSDTSTHGGFSVLRRHANECLPPLDMSMPTPTQELITKDLHGSEWRFKHIYRGQPRR 178
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS FV+ K L++GDA ++LR + GE R+G+RR VQ ++ +P S++S Q+ + V
Sbjct: 179 HLLTTGWSTFVTSKKLIAGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGV 238
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
L+ ++A+ T S+F V+Y PR + + +++ KY++ +G RFKM FE +D P +
Sbjct: 239 LASASHAIKTNSIFLVYYRPRLSQSQYIVSLNKYLESSKIGFNVGMRFKMSFEGEDVPVK 298
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID-RSVSLPPLSIQS 413
+ +G V DL P+ W S W+ L V+WDE + E+VS WEI+ S P ++I
Sbjct: 299 KFSGTVVDKGDLSPH-WQGSDWKTLKVKWDEATNFNGPERVSSWEIEPFDASAPAINIPV 357
Query: 414 SPRMKKLR 421
P MK R
Sbjct: 358 QPSMKNKR 365
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 56/98 (57%), Gaps = 4/98 (4%)
Query: 664 LTSETP--TPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLR 721
L +E+P S QS R+ KV G VG+A+DL L+GY L+ ELE +F ++ L
Sbjct: 571 LVNESPREIQSHQSCSGRNRIKVQMHGHAVGKAVDLGNLDGYVQLMGELEEMFEIKDL-- 628
Query: 722 DPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIY 759
+ W++ +T+ END M VG W EFC V KI I+
Sbjct: 629 GSKEEWKVTFTNDENDTMEVGAVLWQEFCQMVRKIVIH 666
>gi|356520887|ref|XP_003529091.1| PREDICTED: auxin response factor 25-like [Glycine max]
Length = 1110
Score = 323 bits (829), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 176/349 (50%), Positives = 231/349 (66%), Gaps = 13/349 (3%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASS-SAFPPIEVPNF-DLQPQIFCK 113
SI ELW ACAGPL +LP G V+YFPQGH EQVA+S + P ++PN+ +L ++ C
Sbjct: 21 SINPELWQACAGPLVNLPPSGTHVIYFPQGHSEQVAASLNKDPHSQIPNYPNLPSKLLCL 80
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFC 173
+ ++ LLA+ E DEVY Q+ L P P + +A DL + +K P FC
Sbjct: 81 LHNLTLLADPETDEVYAQITLQPVPSFDK---DALLRSDLALKS-------SKPQPDFFC 130
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
K LTASDTSTHGGFSVPRRAA+ FPPLDY Q P+QELVA+DLH W FRHIYRGQP+
Sbjct: 131 KQLTASDTSTHGGFSVPRRAADKIFPPLDYSMQPPAQELVARDLHDTVWTFRHIYRGQPK 190
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
RHLLTTGWS+FVS K L++GD+VLF+R + L LGIRR+ + + S+LS + +
Sbjct: 191 RHLLTTGWSLFVSGKRLLAGDSVLFIRDEKQHLLLGIRRANRQPTNISSSVLSSDSMHIG 250
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVK-IIMNPICIGTRFKMRFEMDDSP 352
+L+ A+A + S F VFY+PR + ++FVIP KY K + + +G RF+M FE +DS
Sbjct: 251 ILAAAAHAAANNSPFTVFYNPRTSPSEFVIPLAKYYKSVYSHQPSLGMRFRMMFETEDSG 310
Query: 353 ERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
RR G +TGI+DLDP RW NS+WR L V WDE + + +VS WEI+
Sbjct: 311 TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGEKRSRVSLWEIE 359
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 66/92 (71%), Gaps = 2/92 (2%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSEND 737
R+ TKV+K+G+ VGR+ID+ R +GY +L +L F +EG L D + GW+++Y D E+D
Sbjct: 998 RTYTKVYKRGA-VGRSIDITRYSGYEELKKDLARRFGIEGQLEDRQRIGWKLVYVDHESD 1056
Query: 738 VMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
V++VGDDPW EF N V I I + +EV++M++
Sbjct: 1057 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMSL 1088
>gi|414869517|tpg|DAA48074.1| TPA: hypothetical protein ZEAMMB73_725019 [Zea mays]
Length = 1086
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 172/365 (47%), Positives = 238/365 (65%), Gaps = 12/365 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASS-SAFPPIEVPNF-DLQPQIFCKVVDV 117
ELW+ACAGPL +LP G++VVYFPQGH EQVA+S ++P++ +L ++ C + V
Sbjct: 24 ELWYACAGPLVALPPAGSLVVYFPQGHSEQVAASMRKDADAKIPSYPNLSSKLICILRSV 83
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+LA+ + DEVY ++ L P + + E +L + + T+ FCKTLT
Sbjct: 84 TMLADPDTDEVYARMTLQPVSNVTHCDKETLLATELALKQ-------TRPQTEFFCKTLT 136
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FP LD+ Q P+QEL A+DLH W FRHIYRGQP+RHLL
Sbjct: 137 ASDTSTHGGFSVPRRAAERIFPHLDFSVQPPAQELQARDLHDAIWTFRHIYRGQPKRHLL 196
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K L++GD+VLF+R +L LGIRR+ + L S+LS + + +L+
Sbjct: 197 TTGWSLFVSGKRLLAGDSVLFIRDGRQQLLLGIRRANRQPVNLSSSVLSSDSMHIGILAA 256
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIM-NPICIGTRFKMRFEMDDSPERRC 356
A+A + S F VFY+PRA+ ++FVIP+ KY K + N + +G RF+M FE ++S RR
Sbjct: 257 AAHAAANNSQFTVFYNPRASPSEFVIPFAKYQKAVYSNQLSLGMRFRMMFETEESATRRY 316
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPR 416
G +TGI+D+DP RW NS+WR + V WDE S+ + +VS WE++ ++ P I SP
Sbjct: 317 MGTITGISDMDPLRWKNSQWRNIQVAWDEAAPSERRTRVSLWEVEPVIA--PFFIYPSPL 374
Query: 417 MKKLR 421
R
Sbjct: 375 FTAKR 379
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 81/140 (57%), Gaps = 9/140 (6%)
Query: 638 FKANMRSH----KDGSFNGTAAGCKLFGF-SLTSETPTPSSQSPGKRSCTKVHKQGSLVG 692
++M SH D +FN + F + S P P Q R+ TKVHK+G+ VG
Sbjct: 924 LSSSMISHPFGVADIAFNSIDSSINDIQFLNRNSRAPGPVQQR--MRTYTKVHKRGA-VG 980
Query: 693 RAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMVVGDDPWHEFCN 751
R+ID+ R +GY++L ++ +F +EG L D + GW+++Y D E DV++VGDDPW +F N
Sbjct: 981 RSIDINRYSGYDELKHDVARMFGIEGQLSDQNRVGWKLVYEDHEKDVLLVGDDPWEDFVN 1040
Query: 752 EVSKIHIYTQEEVEKMTIGT 771
V I I + +E +M + +
Sbjct: 1041 CVRCIRILSPQEERQMRLAS 1060
>gi|300373052|gb|ADG43135.1| auxin response factor 1 [Zea mays]
Length = 1085
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 172/365 (47%), Positives = 238/365 (65%), Gaps = 12/365 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASS-SAFPPIEVPNF-DLQPQIFCKVVDV 117
ELW+ACAGPL +LP G++VVYFPQGH EQVA+S ++P++ +L ++ C + V
Sbjct: 24 ELWYACAGPLVALPPAGSLVVYFPQGHSEQVAASMRKDADAKIPSYPNLSSKLICILRSV 83
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+LA+ + DEVY ++ L P + + E +L + + T+ FCKTLT
Sbjct: 84 TMLADPDTDEVYARMTLQPVSNVTHCDKETLLATELALKQ-------TRPQTEFFCKTLT 136
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FP LD+ Q P+QEL A+DLH W FRHIYRGQP+RHLL
Sbjct: 137 ASDTSTHGGFSVPRRAAERIFPHLDFSVQPPAQELQARDLHDAIWTFRHIYRGQPKRHLL 196
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FVS K L++GD+VLF+R +L LGIRR+ + L S+LS + + +L+
Sbjct: 197 TTGWSLFVSGKRLLAGDSVLFIRDGRQQLLLGIRRANRQPVNLSSSVLSSDSMHIGILAA 256
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIM-NPICIGTRFKMRFEMDDSPERRC 356
A+A + S F VFY+PRA+ ++FVIP+ KY K + N + +G RF+M FE ++S RR
Sbjct: 257 AAHAAANNSQFTVFYNPRASPSEFVIPFAKYQKAVYSNQLSLGMRFRMMFETEESATRRY 316
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPR 416
G +TGI+D+DP RW NS+WR + V WDE S+ + +VS WE++ ++ P I SP
Sbjct: 317 MGTITGISDMDPLRWKNSQWRNIQVAWDEAAPSERRTRVSLWEVEPVIA--PFFIYPSPL 374
Query: 417 MKKLR 421
R
Sbjct: 375 FTAKR 379
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 81/140 (57%), Gaps = 9/140 (6%)
Query: 638 FKANMRSH----KDGSFNGTAAGCKLFGF-SLTSETPTPSSQSPGKRSCTKVHKQGSLVG 692
++M SH D +FN + F + S P P Q R+ TKVHK+G+ VG
Sbjct: 923 LSSSMISHPFGVADIAFNSIDSSINDIQFLNRNSRAPGPVQQR--MRTYTKVHKRGA-VG 979
Query: 693 RAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMVVGDDPWHEFCN 751
R+ID+ R +GY++L ++ +F +EG L D + GW+++Y D E DV++VGDDPW +F N
Sbjct: 980 RSIDINRYSGYDELKHDVARMFGIEGQLSDQNRVGWKLVYEDHEKDVLLVGDDPWEDFVN 1039
Query: 752 EVSKIHIYTQEEVEKMTIGT 771
V I I + +E +M + +
Sbjct: 1040 CVRCIRILSPQEERQMRLAS 1059
>gi|350540000|ref|NP_001234605.1| auxin response factor 19-1 [Solanum lycopersicum]
gi|310697416|gb|ADP06663.1| auxin response factor 19-1 [Solanum lycopersicum]
Length = 1090
Score = 323 bits (828), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 181/365 (49%), Positives = 230/365 (63%), Gaps = 15/365 (4%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASS-SAFPPIEVPNF-DLQPQIFCKVVDV 117
ELW ACAGPL +LP G VVYFPQGH EQVA+S ++PN+ +L ++ C + +V
Sbjct: 19 ELWQACAGPLVNLPVAGTHVVYFPQGHSEQVAASIKKDVEAQIPNYPNLPAKLICLLHNV 78
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
L A+ E DEVY Q+ L P P + EA DL + K P FCKTLT
Sbjct: 79 TLHADPETDEVYAQMTLQPVPSFDK---EALLRSDLSMKA-------NKPQPEFFCKTLT 128
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLDY Q P+QELVA+DLH W FRH+YRGQP+RHLL
Sbjct: 129 ASDTSTHGGFSVPRRAAEKIFPPLDYSLQPPAQELVARDLHDNIWTFRHVYRGQPKRHLL 188
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+ VS K L +GD+VLF+R + + LGIR++ + L S+LS + + +L+
Sbjct: 189 TTGWSLVVSGKRLFAGDSVLFIRDEKHQFLLGIRKANRQPTNLSSSVLSSDSMHIGILAA 248
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A + S F VFY+PRA ++FVIP KY K + I +G RF+M FE ++S RR
Sbjct: 249 AAHAAANNSPFTVFYNPRAGPSEFVIPLAKYYKATYSSQISLGMRFRMMFETEESGTRRY 308
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPR 416
G +TGI+DLDP RW NS+WR L V WDE + +VS WEI+ + P I SSP
Sbjct: 309 MGTITGISDLDPVRWKNSQWRNLQVGWDESTAGERINRVSIWEIEPITA--PFLICSSPF 366
Query: 417 MKKLR 421
R
Sbjct: 367 FSSKR 371
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 103/205 (50%), Gaps = 44/205 (21%)
Query: 613 AIGAEIRKANLLNEHKPVENIPTPTF-KANMRSHKDGSFNGTAAGCKLFGF--------- 662
A GA AN+ N + IP P K++M S KD S N ++ G L +
Sbjct: 883 AFGA----ANMENNQLGLPMIPDPLITKSSMGSRKDFSDNLSSGGGMLSSYENPKEAQPE 938
Query: 663 ---SLTSETPT--------------------PSSQSPGKRSCTKVHKQGSLVGRAIDLWR 699
S+ S+ T P Q P R+ TKV+K+G+ VGR+ID+ R
Sbjct: 939 LLASMASDYVTFNSIDSTINDGSFMDRGAWEPPPQLPRLRTYTKVYKRGA-VGRSIDIAR 997
Query: 700 LNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMVVGDDPWHEFCNEVSKIHI 758
+GY +L +L F +EG L D + GW+++Y D ENDV++VGDDPW EF + V I I
Sbjct: 998 YSGYEELKLDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLLVGDDPWEEFVSCVRCIKI 1057
Query: 759 YTQEEVEKMTI-----GTTDDTQSC 778
+ +EV++M++ G+ Q C
Sbjct: 1058 LSPQEVQQMSLDGDFGGSVLQNQDC 1082
>gi|295844288|gb|ADG43141.1| auxin response factor 7 [Zea mays]
gi|414875581|tpg|DAA52712.1| TPA: hypothetical protein ZEAMMB73_730460 [Zea mays]
Length = 686
Score = 323 bits (828), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 162/368 (44%), Positives = 230/368 (62%), Gaps = 14/368 (3%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSS--AFPPIEVPNFDLQPQIFCKV 114
++ ELW ACAGPL LP+ V YF QGHLEQ+ + A ++ F + +I CKV
Sbjct: 12 LFEELWRACAGPLVELPQTNERVFYFLQGHLEQLQEPTDPALLAEQIKMFQVPNKILCKV 71
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
V+V+L A E DE+Y Q+ L P+P+ ++ QL + + E ++ H FCK
Sbjct: 72 VNVELKAETETDEMYAQITLQPEPD----QVDLPQLPEPPLQE------TSRPVVHSFCK 121
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
LT SDTSTHGGFSV RR A +C P LD P+QEL+ KDLHG EWRF+HIYRGQPRR
Sbjct: 122 ILTPSDTSTHGGFSVLRRHANECLPALDMSMPTPTQELITKDLHGSEWRFKHIYRGQPRR 181
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS FV+ K L++GDA ++LR + G+ R+G+RR VQ ++ +P S++S Q+ + V
Sbjct: 182 HLLTTGWSTFVTSKKLIAGDAFVYLRSETGQQRVGVRRLVQKQSTMPASVISSQSMHLGV 241
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
L+ ++A+ T S+F V+Y PR + + +++ KY++ +G RFKM FE DD P +
Sbjct: 242 LASASHAIRTHSIFLVYYRPRLSQSQYIVRLNKYLESSKIGFDVGMRFKMSFEGDDVPIK 301
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID-RSVSLPPLSIQS 413
+ +G V DL P +W S+W+ L V+WDE + E+VS WEI+ S P +++
Sbjct: 302 KFSGTVVDKGDLSP-QWQGSEWKTLKVKWDEATNLNGPERVSSWEIEPFDASAPAITMPV 360
Query: 414 SPRMKKLR 421
P MK R
Sbjct: 361 QPSMKNKR 368
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%)
Query: 672 SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILY 731
S QS RS KV G+ V RA+DL L+GY L+ E+ +F ++ L + W++ +
Sbjct: 577 SHQSCSGRSRIKVQMHGNDVCRAVDLGNLDGYEQLMGEVGEMFEIKDLGSKEKEEWKVTF 636
Query: 732 TDSENDVMVVGDDPWHEFCNEVSKIHIYT 760
+ EN+ M VG PW EFC V KI I++
Sbjct: 637 INDENETMEVGAVPWQEFCQMVRKIVIHS 665
>gi|326530666|dbj|BAK01131.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 955
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 169/364 (46%), Positives = 232/364 (63%), Gaps = 17/364 (4%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPP-IEVPNF-DLQPQIFCKV 114
I ELWHACAGPL LP++G++V YFPQGH EQVA+++ P +PN+ L Q+ C+V
Sbjct: 41 INSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTKKTPNSRIPNYPSLPSQLLCQV 100
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
++ + A+K+ DEVY Q+ L P +N E D+ + G + +K FCK
Sbjct: 101 HNITMHADKDTDEVYAQMTLQP------VNSET----DVFPIQSLGSYAKSKHPAEYFCK 150
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
LTASDTSTHGGFSVPRRAAE FP LDY Q P+QEL+ +DLH W FRHIYRGQP+R
Sbjct: 151 NLTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKR 210
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS+FV K L +GD+VLF+R + +L +G+RR+ + L S+LS + + V
Sbjct: 211 HLLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLVGVRRATNQQTALSSSVLSTDSMHIGV 270
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
L+ A+A S+ S F ++Y+PR + + FV+P +Y K I +G R M E ++S +R
Sbjct: 271 LAAAAHAASSGSSFTIYYNPRTSPSPFVVPMTRYNKAIYIQQSVGMRIAMMSETEESGKR 330
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIG--SDHQEQVSPWEI---DRSVSLPPL 409
R G + G++D DP RWPNSKWR L V WDE + E+VS W+I + ++ LP
Sbjct: 331 RHTGTIVGVSDSDPMRWPNSKWRNLQVEWDEHEHGYGERPERVSIWDIETPENTIVLPSA 390
Query: 410 SIQS 413
S+ S
Sbjct: 391 SLNS 394
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 63/105 (60%), Gaps = 2/105 (1%)
Query: 676 PGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKG-WRILYTDS 734
P R+ TKV K GS VGR+ID+ R Y +L S + +F ++G L PA W+++Y D
Sbjct: 848 PPVRTYTKVQKLGS-VGRSIDVTRYRDYRELRSAIASMFGLQGKLEHPASSDWKLVYVDY 906
Query: 735 ENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGTTDDTQSCL 779
ENDV++VGDDPW EF N V I I + EV++M+ C+
Sbjct: 907 ENDVLLVGDDPWEEFINCVRCIRILSPSEVQQMSENGMQVLNDCI 951
>gi|323388733|gb|ADX60171.1| ARF transcription factor [Zea mays]
Length = 686
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 162/368 (44%), Positives = 230/368 (62%), Gaps = 14/368 (3%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSS--AFPPIEVPNFDLQPQIFCKV 114
++ ELW ACAGPL LP+ V YF QGHLEQ+ + A ++ F + +I CKV
Sbjct: 12 LFEELWRACAGPLVELPQTNERVFYFLQGHLEQLQEPTDPALLAEQIKMFQVPNKILCKV 71
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
V+V+L A E DE+Y Q+ L P+P+ ++ QL + + E ++ H FCK
Sbjct: 72 VNVELKAETETDEMYAQITLQPEPD----QVDLPQLPEPPLQE------TSRPVVHSFCK 121
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
LT SDTSTHGGFSV RR A +C P LD P+QEL+ KDLHG EWRF+HIYRGQPRR
Sbjct: 122 ILTPSDTSTHGGFSVLRRHANECLPALDMSMPTPTQELITKDLHGSEWRFKHIYRGQPRR 181
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS FV+ K L++GDA ++LR + G+ R+G+RR VQ ++ +P S++S Q+ + V
Sbjct: 182 HLLTTGWSTFVTSKKLIAGDAFVYLRSETGQQRVGVRRLVQKQSTMPASVISSQSMHLGV 241
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
L+ ++A+ T S+F V+Y PR + + +++ KY++ +G RFKM FE DD P +
Sbjct: 242 LASASHAIRTHSIFLVYYRPRLSQSQYIVRLNKYLESSKIGFDVGMRFKMSFEGDDVPIK 301
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID-RSVSLPPLSIQS 413
+ +G V DL P +W S+W+ L V+WDE + E+VS WEI+ S P +++
Sbjct: 302 KFSGTVVDKGDLSP-QWQGSEWKTLKVKWDEATNLNGPERVSSWEIEPFDASAPAITMPV 360
Query: 414 SPRMKKLR 421
P MK R
Sbjct: 361 QPSMKNKR 368
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%)
Query: 672 SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILY 731
S QS RS KV G+ V RA+DL L+GY L+ E+ +F ++ L + W++ +
Sbjct: 577 SHQSCSGRSRIKVQMHGNDVCRAVDLGNLDGYEQLMGEVGEMFEIKDLGSKEKEEWKVTF 636
Query: 732 TDSENDVMVVGDDPWHEFCNEVSKIHIYT 760
+ EN+ M VG PW EFC V KI I++
Sbjct: 637 INDENETMEVGAVPWQEFCQMVRKIVIHS 665
>gi|356520917|ref|XP_003529106.1| PREDICTED: auxin response factor 9-like [Glycine max]
Length = 664
Score = 323 bits (827), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 172/387 (44%), Positives = 237/387 (61%), Gaps = 37/387 (9%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKVV 115
+Y +LW ACAGP +P+ G V YFPQGH+EQ+ S++ +P F L +I C+VV
Sbjct: 15 LYEQLWKACAGPHVEVPRTGQRVFYFPQGHMEQLEVSTNQELNQRIPLFKLSSKILCRVV 74
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTP------ 169
+V LLA +E DEVY Q+ L+P E+ Q E PT P
Sbjct: 75 NVHLLAEQETDEVYAQITLVP---------ESNQTE------------PTSPDPCPAELP 113
Query: 170 ----HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFR 225
H FCK LTASDTSTHGGFSV R+ A +C P LD + P+QELVAKDL G EWRF+
Sbjct: 114 RPRVHSFCKVLTASDTSTHGGFSVLRKHATECLPALDMSKSTPTQELVAKDLQGFEWRFK 173
Query: 226 HIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSIL 285
HI+RGQPRRHLLTTGWS FV+ K LV+GD +FLRG +GELR+G+RR ++ +P S++
Sbjct: 174 HIFRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGNNGELRVGVRRIAPLQSSMPSSVI 233
Query: 286 SKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMR 345
S Q+ + VL+ ++AV+T+++F V+Y PR + F++ KY++ I +G RFKMR
Sbjct: 234 SSQSMHLGVLATASHAVATQTLFVVYYKPRTSQ--FIVSVNKYLEAINQKCNVGMRFKMR 291
Query: 346 FEMDDSPE--RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRS 403
FE D+SPE +R +G + G+ D+ P+ W NS WR L V+WDE ++VS WEI+
Sbjct: 292 FEGDESPENDKRFSGTILGVEDISPH-WVNSNWRSLKVQWDEPASFPRPDRVSSWEIEHI 350
Query: 404 VSLPPLSIQSSPRMKKLRTGLQAPPPD 430
++ P + +K R + PD
Sbjct: 351 LACVPTTSSQPAVIKNKRPRQASEVPD 377
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 67/93 (72%), Gaps = 1/93 (1%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDV 738
RSCTKV QG VGRA+DL L+GY+ L+ ELE +F+++G L+ K W ++TD E D+
Sbjct: 554 RSCTKVQMQGVAVGRAVDLTTLDGYDQLVDELEKMFDIKGQLQHRNK-WETVFTDDEGDM 612
Query: 739 MVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGT 771
M+VGDDPW EFCN V +I I + ++V K++ G+
Sbjct: 613 MLVGDDPWPEFCNMVKRIFICSSQDVHKLSSGS 645
>gi|356567961|ref|XP_003552183.1| PREDICTED: auxin response factor 9-like [Glycine max]
Length = 664
Score = 321 bits (823), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 169/368 (45%), Positives = 236/368 (64%), Gaps = 17/368 (4%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKVV 115
+Y +LW ACAGP +P+ G V YFPQGH+EQ+ S++ +P F L +I C+VV
Sbjct: 14 LYEQLWKACAGPHVEVPRTGQRVFYFPQGHMEQLEVSTNQELNQRIPLFKLPSKILCRVV 73
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKT 175
+V LLA +E DEVY Q+ L+P E+ Q E + D P+ H FCK
Sbjct: 74 NVHLLAEQETDEVYAQITLVP---------ESNQAEPMSPDP-CPAELPSPRV-HSFCKV 122
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
LTASDTSTHGGFSV R+ A +C P LD + P+QELVAKDL G EWRF+HI+RGQPRRH
Sbjct: 123 LTASDTSTHGGFSVLRKHATECLPALDMSKSTPTQELVAKDLQGYEWRFKHIFRGQPRRH 182
Query: 236 LLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVL 295
LLTTGWS FV+ K LV+GD +FLRG +GELR+G+RR ++ +P S++S Q+ + VL
Sbjct: 183 LLTTGWSNFVTSKRLVAGDTFVFLRGNNGELRVGVRRIAPVQSSMPSSVISSQSMHLGVL 242
Query: 296 SVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-- 353
+ ++AV+T+++F V+Y PRA+ F++ KY++ I +G RFK RFE D+SPE
Sbjct: 243 ATASHAVATQTLFVVYYKPRASQ--FIVSVNKYLEAINQKCNVGMRFKTRFEGDESPENY 300
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS 413
+R +G + G+ D+ P+ W NS WR L V+WDE ++V PWEI+ ++ P +
Sbjct: 301 KRFSGTIVGVEDISPH-WVNSNWRSLKVQWDEPASFPRPDRVLPWEIEPILASVPTTSSQ 359
Query: 414 SPRMKKLR 421
+ +K R
Sbjct: 360 TAAIKNKR 367
Score = 106 bits (264), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 68/93 (73%), Gaps = 1/93 (1%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDV 738
RSCTKV QG VGRA+DL L+GY+ L+ ELE +F+++G L+ K W I++TD E D+
Sbjct: 554 RSCTKVQMQGVAVGRAVDLTTLDGYDQLVDELEKMFDIKGQLQLRNK-WEIVFTDDEGDM 612
Query: 739 MVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGT 771
M+VGDDPW EFC V +I IY+ ++V K++ G+
Sbjct: 613 MLVGDDPWLEFCKMVRRIFIYSSQDVHKLSSGS 645
>gi|357520645|ref|XP_003630611.1| Auxin response factor [Medicago truncatula]
gi|355524633|gb|AET05087.1| Auxin response factor [Medicago truncatula]
Length = 1096
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 171/345 (49%), Positives = 228/345 (66%), Gaps = 13/345 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASS-SAFPPIEVPNF-DLQPQIFCKVVDV 117
ELW ACAGPL +LP G VVYFPQGH EQVA+S ++VPN+ +L ++ C + +
Sbjct: 31 ELWQACAGPLVNLPLPGTHVVYFPQGHSEQVAASLKKDGDVQVPNYSNLPSKLPCTLHSL 90
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
L A+ + DEVY ++ L P + +++A D+ + K P FCK LT
Sbjct: 91 TLHADSDTDEVYARMTLQP---VSSFDMDAILRSDISLKSN-------KPQPEFFCKQLT 140
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLD+ Q P+QELVAKDLHG W+FRHIYRGQP+RHLL
Sbjct: 141 ASDTSTHGGFSVPRRAAEKIFPPLDFSAQPPAQELVAKDLHGNVWKFRHIYRGQPKRHLL 200
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+F+S K L++GD+VLF+R + +L LGIRR+ + L S+LS + + +L+
Sbjct: 201 TTGWSLFISGKRLLAGDSVLFIRDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAA 260
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIM-NPICIGTRFKMRFEMDDSPERRC 356
A+A + S F VFY+PRA+ ++FVIP KY + + + I G RF+M FE +DS RR
Sbjct: 261 AAHASANNSPFTVFYNPRASPSEFVIPLAKYYRAVYSHQISPGMRFRMMFETEDSGTRRY 320
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
G V G++DLD RW NS+WR L V WDE + + +VS WEI+
Sbjct: 321 MGTVIGVSDLDSVRWKNSQWRNLQVGWDEATAGERRSRVSIWEIE 365
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 67/92 (72%), Gaps = 2/92 (2%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSEND 737
R+ TKV+K+G+ VGR+ID+ R +GY++L +L F +EG L D + GW+++Y D END
Sbjct: 984 RTYTKVYKRGA-VGRSIDITRYSGYDELKHDLARRFGIEGQLEDRQRVGWKLVYVDHEND 1042
Query: 738 VMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
V++VGDDPW EF N V I I + +EV++M++
Sbjct: 1043 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMSL 1074
>gi|218187833|gb|EEC70260.1| hypothetical protein OsI_01065 [Oryza sativa Indica Group]
Length = 699
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 160/370 (43%), Positives = 225/370 (60%), Gaps = 16/370 (4%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSS--AFPPIEVPNFDLQPQIFCKV 114
++ LW ACAGPL +P++ V YF QGHLEQ+ + A ++ F + +I CKV
Sbjct: 15 LFAVLWRACAGPLVEVPQRDERVFYFLQGHLEQLQEPTDPALLAEQIKMFQVPYKILCKV 74
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
V+V+L A E DEV+ Q+ L P P+ E L + H FCK
Sbjct: 75 VNVELKAETETDEVFAQITLQPDPDQENLPTLPDPPL----------PEQPRPVVHSFCK 124
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
LT SDTSTHGGFSV RR A +C PPLD P+QEL+ KDLHG EWRF+HIYRGQPRR
Sbjct: 125 ILTPSDTSTHGGFSVLRRHANECLPPLDMSMATPTQELITKDLHGSEWRFKHIYRGQPRR 184
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS FV+ K L+SGDA ++LR + GE R+G+RR VQ ++ +P S++S Q+ + V
Sbjct: 185 HLLTTGWSTFVTSKKLISGDAFVYLRSETGEQRVGVRRLVQKQSTMPASVISSQSMHLGV 244
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
L+ ++A+ T S+F V+Y PR + + +++ KY+ +G RFKM FE +D P +
Sbjct: 245 LASASHAIKTNSIFLVYYRPRLSQSQYIVSVNKYLAASKVGFNVGMRFKMSFEGEDVPVK 304
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPP---LSI 411
+ +G + G DL +W S+W+ L V+WDE + E+VSPWEI+ P + +
Sbjct: 305 KFSGTIVGEGDLS-LQWSGSEWKSLKVQWDEVTNVNGPERVSPWEIETCDGTAPAINVPL 363
Query: 412 QSSPRMKKLR 421
QS+ + K+ R
Sbjct: 364 QSATKNKRPR 373
Score = 90.5 bits (223), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
Query: 672 SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILY 731
S Q+ R+ KV G+ VGRA+DL L+GY L++ELE +FN ++D + W++ +
Sbjct: 588 SHQNYTARTRIKVQMHGNAVGRAVDLANLDGYEQLMNELEEMFN----IKDLKQKWKVAF 643
Query: 732 TDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
TD E D M VGDDPW EFC V KI +Y E+ +K+
Sbjct: 644 TDDEGDTMEVGDDPWLEFCQMVRKIVLYPIEDEKKI 679
>gi|356511421|ref|XP_003524425.1| PREDICTED: auxin response factor 25-like [Glycine max]
Length = 1099
Score = 321 bits (822), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 180/349 (51%), Positives = 230/349 (65%), Gaps = 13/349 (3%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASS-SAFPPIEVPNF-DLQPQIFCK 113
+I ELW ACAGPL +LP G VVYFPQGH EQVA+S +VPN+ +L +I C
Sbjct: 24 TINAELWQACAGPLLNLPSPGTHVVYFPQGHSEQVAASLKKDVDAQVPNYTNLPSKIPCL 83
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFC 173
+ +V L A+ + DEVY Q+ L P P + +A D+ + RS +K P FC
Sbjct: 84 LHNVTLHADPDTDEVYAQMTLQPVPSFD---TDALLRSDIFL------RS-SKPQPEFFC 133
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
K LTASDTSTHGGFSVPRRAAE FPPLDY Q P+QELVA+DLH WRFRHIYRGQP+
Sbjct: 134 KQLTASDTSTHGGFSVPRRAAEKIFPPLDYSVQPPAQELVARDLHDNVWRFRHIYRGQPK 193
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
RHLLTTGWS+F+ K L++GD+VLF+R + +L LGIRR+ + + L S+LS + +
Sbjct: 194 RHLLTTGWSLFIGGKRLLAGDSVLFVRDEKQQLLLGIRRANRQPSNLSSSVLSSDSMHIG 253
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIM-NPICIGTRFKMRFEMDDSP 352
VL+ A AV+ S F VFY+PRA+ ++FVIP KY K + + I G RF+M FE +DS
Sbjct: 254 VLAAAAQAVANNSPFTVFYNPRASPSEFVIPLAKYSKAVYSHHISPGMRFRMMFETEDSG 313
Query: 353 ERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
RR G + G++DLD RW NS WR L V WDE + Q +VS WEI+
Sbjct: 314 TRRYMGTIIGVSDLDSVRWKNSLWRNLQVGWDESTAEERQSRVSVWEIE 362
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 66/92 (71%), Gaps = 2/92 (2%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSEND 737
R+ TKV+K+G+ VGR+ID+ R +GY DL +L F +EG L D + GW+++Y D END
Sbjct: 987 RTYTKVYKRGA-VGRSIDITRYSGYEDLKQDLALRFGIEGQLEDLQRIGWKLVYVDHEND 1045
Query: 738 VMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
V++VGDDPW EF N V I I + +EV++M++
Sbjct: 1046 VLLVGDDPWEEFVNCVRCIKILSPQEVQQMSL 1077
>gi|158563960|sp|Q6YZW0.2|ARFU_ORYSJ RecName: Full=Auxin response factor 21; AltName: Full=OsARF7b
Length = 1116
Score = 320 bits (821), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 171/374 (45%), Positives = 241/374 (64%), Gaps = 12/374 (3%)
Query: 54 SSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASS-SAFPPIEVPNF-DLQPQIF 111
++ + ELW+ACAGPL SLP +G+++VYFPQGH EQVA+S ++P++ +L ++
Sbjct: 19 ATKVNQELWYACAGPLVSLPPQGSLIVYFPQGHSEQVAASMRKDADAQIPSYPNLPSKLI 78
Query: 112 CKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHM 171
C + V +LA+ + DEVY ++ L P + + E +L + + T+
Sbjct: 79 CILHSVTMLADPDTDEVYARMTLQPVSNVTQCDKETLLASELALKQ-------TRPQTEF 131
Query: 172 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQ 231
FCKTLTASDTSTHGGFSVPRRAAE FP LD+ Q P+QEL A+DLH W FRHIYRGQ
Sbjct: 132 FCKTLTASDTSTHGGFSVPRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQ 191
Query: 232 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSY 291
P+RHLLTTGWS+FVS K L++GD+VLF+R +L LGIRR+ + L S+LS + +
Sbjct: 192 PKRHLLTTGWSLFVSGKRLLAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMH 251
Query: 292 PNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIM-NPICIGTRFKMRFEMDD 350
+L+ A+A + S F ++Y+PRA+ ++FVIP+ KY K + N + +G RF+M FE ++
Sbjct: 252 IGILAAAAHAAANNSQFTIYYNPRASTSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEE 311
Query: 351 SPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLS 410
S RR G +TGI+DLDP RW S WR + V WDE ++ + +VS WEI+ ++ P
Sbjct: 312 SGTRRYMGTITGISDLDPVRWKTSHWRNIQVAWDEAAPTERRTRVSLWEIEPIIA--PFF 369
Query: 411 IQSSPRMKKLRTGL 424
I SP R L
Sbjct: 370 IYPSPLFTAKRPRL 383
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 70/106 (66%), Gaps = 7/106 (6%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSEND 737
R+ TKVHK+G+ VGR+ID+ R +GY++L ++ +F +EG L D + GW+++Y D E D
Sbjct: 998 RTYTKVHKRGA-VGRSIDINRYSGYDELKHDVARMFGIEGQLGDQNRVGWKLVYEDHEKD 1056
Query: 738 VMVVGDDPWHEFCNEVSKIHIYT-QEEVEKMTIGTTDDT----QSC 778
V++VGDDPW +F V I I + QEE++ +G D+ Q+C
Sbjct: 1057 VLLVGDDPWEDFVKCVRCIRILSPQEEMQMRLVGDFGDSFLPNQAC 1102
>gi|42408525|dbj|BAD09704.1| auxin response factor 7b [Oryza sativa Japonica Group]
gi|42409173|dbj|BAD10439.1| auxin response factor 7b [Oryza sativa Japonica Group]
Length = 1113
Score = 320 bits (821), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 172/374 (45%), Positives = 240/374 (64%), Gaps = 15/374 (4%)
Query: 54 SSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASS-SAFPPIEVPNF-DLQPQIF 111
++ + ELW+ACAGPL SLP +G+++VYFPQGH EQVA+S ++P++ +L ++
Sbjct: 19 ATKVNQELWYACAGPLVSLPPQGSLIVYFPQGHSEQVAASMRKDADAQIPSYPNLPSKLI 78
Query: 112 CKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHM 171
C + V +LA+ + DEVY ++ L P + + L A +L T+
Sbjct: 79 CILHSVTMLADPDTDEVYARMTLQPVTQCDKETLLASEL----------ALKQTRPQTEF 128
Query: 172 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQ 231
FCKTLTASDTSTHGGFSVPRRAAE FP LD+ Q P+QEL A+DLH W FRHIYRGQ
Sbjct: 129 FCKTLTASDTSTHGGFSVPRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQ 188
Query: 232 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSY 291
P+RHLLTTGWS+FVS K L++GD+VLF+R +L LGIRR+ + L S+LS + +
Sbjct: 189 PKRHLLTTGWSLFVSGKRLLAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMH 248
Query: 292 PNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIM-NPICIGTRFKMRFEMDD 350
+L+ A+A + S F ++Y+PRA+ ++FVIP+ KY K + N + +G RF+M FE ++
Sbjct: 249 IGILAAAAHAAANNSQFTIYYNPRASTSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEE 308
Query: 351 SPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLS 410
S RR G +TGI+DLDP RW S WR + V WDE ++ + +VS WEI+ ++ P
Sbjct: 309 SGTRRYMGTITGISDLDPVRWKTSHWRNIQVAWDEAAPTERRTRVSLWEIEPIIA--PFF 366
Query: 411 IQSSPRMKKLRTGL 424
I SP R L
Sbjct: 367 IYPSPLFTAKRPRL 380
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 70/106 (66%), Gaps = 7/106 (6%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSEND 737
R+ TKVHK+G+ VGR+ID+ R +GY++L ++ +F +EG L D + GW+++Y D E D
Sbjct: 995 RTYTKVHKRGA-VGRSIDINRYSGYDELKHDVARMFGIEGQLGDQNRVGWKLVYEDHEKD 1053
Query: 738 VMVVGDDPWHEFCNEVSKIHIYT-QEEVEKMTIGTTDDT----QSC 778
V++VGDDPW +F V I I + QEE++ +G D+ Q+C
Sbjct: 1054 VLLVGDDPWEDFVKCVRCIRILSPQEEMQMRLVGDFGDSFLPNQAC 1099
>gi|115477344|ref|NP_001062268.1| Os08g0520500 [Oryza sativa Japonica Group]
gi|19352047|dbj|BAB85917.1| auxin response factor 7b [Oryza sativa]
gi|113624237|dbj|BAF24182.1| Os08g0520500, partial [Oryza sativa Japonica Group]
Length = 1096
Score = 319 bits (818), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 172/374 (45%), Positives = 239/374 (63%), Gaps = 15/374 (4%)
Query: 54 SSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASS-SAFPPIEVPNF-DLQPQIF 111
++ + ELW+ACAGPL SLP +G+++VYFPQGH EQVA+S ++P++ +L ++
Sbjct: 2 ATKVNQELWYACAGPLVSLPPQGSLIVYFPQGHSEQVAASMRKDADAQIPSYPNLPSKLI 61
Query: 112 CKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHM 171
C + V +LA+ + DEVY ++ L P + L A +L T+
Sbjct: 62 CILHSVTMLADPDTDEVYARMTLQPVSNCDKETLLASEL----------ALKQTRPQTEF 111
Query: 172 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQ 231
FCKTLTASDTSTHGGFSVPRRAAE FP LD+ Q P+QEL A+DLH W FRHIYRGQ
Sbjct: 112 FCKTLTASDTSTHGGFSVPRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQ 171
Query: 232 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSY 291
P+RHLLTTGWS+FVS K L++GD+VLF+R +L LGIRR+ + L S+LS + +
Sbjct: 172 PKRHLLTTGWSLFVSGKRLLAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMH 231
Query: 292 PNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIM-NPICIGTRFKMRFEMDD 350
+L+ A+A + S F ++Y+PRA+ ++FVIP+ KY K + N + +G RF+M FE ++
Sbjct: 232 IGILAAAAHAAANNSQFTIYYNPRASTSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEE 291
Query: 351 SPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLS 410
S RR G +TGI+DLDP RW S WR + V WDE ++ + +VS WEI+ ++ P
Sbjct: 292 SGTRRYMGTITGISDLDPVRWKTSHWRNIQVAWDEAAPTERRTRVSLWEIEPIIA--PFF 349
Query: 411 IQSSPRMKKLRTGL 424
I SP R L
Sbjct: 350 IYPSPLFTAKRPRL 363
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 70/106 (66%), Gaps = 7/106 (6%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSEND 737
R+ TKVHK+G+ VGR+ID+ R +GY++L ++ +F +EG L D + GW+++Y D E D
Sbjct: 978 RTYTKVHKRGA-VGRSIDINRYSGYDELKHDVARMFGIEGQLGDQNRVGWKLVYEDHEKD 1036
Query: 738 VMVVGDDPWHEFCNEVSKIHIYT-QEEVEKMTIGTTDDT----QSC 778
V++VGDDPW +F V I I + QEE++ +G D+ Q+C
Sbjct: 1037 VLLVGDDPWEDFVKCVRCIRILSPQEEMQMRLVGDFGDSFLPNQAC 1082
>gi|38346082|emb|CAE04850.2| OSJNBa0084K01.22 [Oryza sativa Japonica Group]
gi|116309860|emb|CAH66895.1| OSIGBa0099L20.10 [Oryza sativa Indica Group]
Length = 954
Score = 319 bits (818), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 166/347 (47%), Positives = 221/347 (63%), Gaps = 13/347 (3%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSS-AFPPIEVPNF-DLQPQIFCKV 114
I ELWHACAGPL LP++G++V YFPQGH EQVA+++ P +PN+ +L Q+ C+V
Sbjct: 36 INSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTRKIPNSRIPNYPNLPSQLLCQV 95
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
++ L A+K+ DEVY Q+ L P +N E D+ G + +K FCK
Sbjct: 96 HNITLHADKDTDEVYAQMTLQP------VNSET----DVFPIPTLGAYTKSKHPTEYFCK 145
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
LTASDTSTHGGFSVPRRAAE FP LDY Q P+QEL+ +DLH W FRHIYRGQP+R
Sbjct: 146 NLTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKR 205
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS+FV K L +GD+VLF+R + +L LG+RR+ + + L S+LS + + V
Sbjct: 206 HLLTTGWSLFVGAKRLKAGDSVLFIRDEKSQLLLGVRRATRQQTMLSSSVLSTDSMHIGV 265
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
L+ A ++ + H + R + + FVIP +Y K +G RF M FE ++S +R
Sbjct: 266 LAAAA-HAASSAFGHSWNLHRTSPSPFVIPVARYNKATYMQPSVGMRFAMMFETEESSKR 324
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
R G V GI+D DP RWPNSKWR L V WDE + E+VS W+I+
Sbjct: 325 RYTGTVVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIE 371
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Query: 676 PGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKG-WRILYTDS 734
P R+ TKV KQGS VGR+ID+ Y++L S + +F ++G L P W+++Y D
Sbjct: 848 PPVRTYTKVQKQGS-VGRSIDVTGFRNYHELRSAIACMFGLQGKLEHPGSSEWKLVYVDY 906
Query: 735 ENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGTTDDTQSCLDQA 782
ENDV++VGDDPW EF N V I I + EV++M+ C+ A
Sbjct: 907 ENDVLLVGDDPWEEFINCVRCIRILSPSEVQQMSENGMHVLNDCIQAA 954
>gi|357148474|ref|XP_003574778.1| PREDICTED: auxin response factor 21-like [Brachypodium distachyon]
Length = 1088
Score = 319 bits (817), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 178/413 (43%), Positives = 255/413 (61%), Gaps = 26/413 (6%)
Query: 37 SSSSSSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASS-SA 95
S+ SSC + + S + ELW+ACAGPL +LP G++VVYFPQGH EQVA+S
Sbjct: 2 SAPESSCGGDEEAGMR-RSKVNQELWYACAGPLVALPPAGSLVVYFPQGHSEQVAASMRK 60
Query: 96 FPPIEVPNF-DLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLG 154
++P++ +L ++ C + +V + A+ + DEVY ++ L P + + E ++
Sbjct: 61 DADAQIPSYPNLPSKLICILHNVTMEADPDTDEVYARMTLQPVSNVTQCDKEILLASEIA 120
Query: 155 VDEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVA 214
+ + ++ FCKTLTASDTSTHGGFSVPRRAAE FP LD+ Q P+QEL A
Sbjct: 121 LKQ-------SRPQTEFFCKTLTASDTSTHGGFSVPRRAAERIFPQLDFSLQPPAQELQA 173
Query: 215 KDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSV 274
+DLH W FRHI+RGQP+RHLLTTGWS+F+S K L++GD+VLF+R +L LGIRR+
Sbjct: 174 RDLHDNTWTFRHIFRGQPKRHLLTTGWSLFISGKRLLAGDSVLFIRDGKHQLLLGIRRAN 233
Query: 275 QPRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIM- 333
+ L S+LS + + VL+ A+A + S F +FY+PRA+ ++FVIP+ KY K +
Sbjct: 234 RQPTNLSSSVLSSDSMHIGVLAAAAHAAANNSQFTIFYNPRASPSEFVIPFAKYQKAVYS 293
Query: 334 NPICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQE 393
N + +G RF+M FE ++S RR G +TGI+DLDP RW +S+WR + V WDE ++ +
Sbjct: 294 NQLSLGMRFRMMFETEESGTRRYMGTITGISDLDPVRWKSSQWRSIQVAWDEAAPTERRT 353
Query: 394 QVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGGVLDFEES 446
+VS WEI+ ++ P I SP R AR G++D E S
Sbjct: 354 RVSLWEIEPVIA--PFFIYPSPLFTAKR-------------ARQPGMIDDETS 391
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/152 (37%), Positives = 88/152 (57%), Gaps = 14/152 (9%)
Query: 638 FKANMRSHK----DGSFNGTAAGCKLFGF-SLTSETPTPSSQSPGKRSCTKVHKQGSLVG 692
++M SH D +FN + F + S P P+ Q R+ TKVHK+G+ VG
Sbjct: 931 ISSSMISHSFGVADMAFNSIDSAINDTPFLNRNSRAPAPAHQR--MRTYTKVHKRGA-VG 987
Query: 693 RAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMVVGDDPWHEFCN 751
R+ID+ R +GY++L ++ +F +EG L D ++ GW+++Y D E DV++VGDDPW +F N
Sbjct: 988 RSIDINRYSGYDELKHDIARMFGIEGQLGDQSRVGWKLVYEDHEKDVLLVGDDPWEDFLN 1047
Query: 752 EVSKIHIYT-QEEVEKMTIGTTDD----TQSC 778
V I I + QEE++ +G D Q+C
Sbjct: 1048 CVRCIRILSPQEEMQMRLVGDIGDGFLPNQAC 1079
>gi|242063990|ref|XP_002453284.1| hypothetical protein SORBIDRAFT_04g003240 [Sorghum bicolor]
gi|241933115|gb|EES06260.1| hypothetical protein SORBIDRAFT_04g003240 [Sorghum bicolor]
Length = 1143
Score = 318 bits (816), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 171/351 (48%), Positives = 229/351 (65%), Gaps = 17/351 (4%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCK 113
+I +LW+ACAGPL SLP G++VVYFPQGH EQVA+S VP++ +L ++ C
Sbjct: 36 AINADLWYACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDIDAHVPSYPNLPSKLICL 95
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHM-- 171
+ V L A+ + DEVY Q+ L P + EA QL +L + + P M
Sbjct: 96 LHSVTLHADPDTDEVYAQMTLQP---VNTYGKEALQLSELALKH---------ARPQMEF 143
Query: 172 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQ 231
FCKTLTASDTSTHGGFSVPRRAAE PPLD+ Q P+QEL A+D+H W FRHI+RGQ
Sbjct: 144 FCKTLTASDTSTHGGFSVPRRAAEKILPPLDFSMQPPAQELQARDIHDNVWTFRHIFRGQ 203
Query: 232 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSY 291
P+RHLLTTGWS+FV K L +GD+V+F+R + +L LGIRR+ + + S+LS + +
Sbjct: 204 PKRHLLTTGWSLFVGGKRLFAGDSVIFVRDERQQLLLGIRRASRQPTNISSSVLSSDSMH 263
Query: 292 PNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIM-NPICIGTRFKMRFEMDD 350
VL+ A+A + S F +FY+PRA+ +FVIP+ KY K + N I +G RF+M FE ++
Sbjct: 264 IGVLAAAAHAAANNSPFTIFYNPRASPTEFVIPFAKYQKALYSNQISLGMRFRMMFETEE 323
Query: 351 SPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
RR G +TGI+DLDP RW NS+WR L V WDE + + +VS WEI+
Sbjct: 324 LGMRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSMWEIE 374
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 66/92 (71%), Gaps = 2/92 (2%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSEND 737
R+ TKV+K+G+ VGR+ID+ R +GY +L L +F +EG L D + GW+++Y D E+D
Sbjct: 1010 RTFTKVYKRGA-VGRSIDIGRFSGYEELKHALARMFGIEGQLEDRQRIGWKLVYKDHEDD 1068
Query: 738 VMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
++++GDDPW EF N V I I + +EV++M++
Sbjct: 1069 ILLLGDDPWEEFVNCVKCIRILSPQEVQQMSL 1100
>gi|357138654|ref|XP_003570905.1| PREDICTED: auxin response factor 5-like [Brachypodium distachyon]
Length = 1141
Score = 318 bits (816), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 173/353 (49%), Positives = 232/353 (65%), Gaps = 17/353 (4%)
Query: 54 SSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASS-SAFPPIEVPNF-DLQPQIF 111
+++I ELWHACAGPL SLP G++VVYFPQGH EQVA+S +VPN+ +L ++
Sbjct: 27 AATINGELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDVEAQVPNYPNLPSKLI 86
Query: 112 CKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHM 171
C + V L A+ + DEVY Q+ L P + EA QL +L + ++ P M
Sbjct: 87 CLLHSVILQADPDTDEVYAQMTLQP---VNTYAKEALQLSELAL---------RQARPQM 134
Query: 172 --FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
FCKTLTASDTSTHGGFSVPRRAAE FP LD+ Q P QEL A+D+H W FRHI+R
Sbjct: 135 EFFCKTLTASDTSTHGGFSVPRRAAEKIFPSLDFSLQPPCQELQARDIHDNIWTFRHIFR 194
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQN 289
GQP+RHLLTTGWS+FVS K L +GD+V+F+R + +L LGIRR+ + + S+LS +
Sbjct: 195 GQPKRHLLTTGWSLFVSGKKLFAGDSVIFVRDEKHQLLLGIRRANRQPTNISSSVLSSDS 254
Query: 290 SYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIM-NPICIGTRFKMRFEM 348
+ VL+ A+A + S F +FY+PRA+ +FVIP+ KY K + N I +G RF+M E
Sbjct: 255 MHIGVLAAAAHAAANSSPFTIFYNPRASPTEFVIPFAKYQKAMYSNQISLGMRFRMTCET 314
Query: 349 DDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
++ RR G +TGI+DLDP RW +S+WR L V WDE + + +VS WEI+
Sbjct: 315 EELGTRRYMGTITGISDLDPVRWKSSQWRSLQVGWDESAAGERRNRVSIWEIE 367
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 67/92 (72%), Gaps = 2/92 (2%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSEND 737
R+ TKV+K+G+ VGR+ID+ + +GY +L L +F +EG L D + GW+++YTD E+D
Sbjct: 1008 RTFTKVYKRGA-VGRSIDIGKYSGYGELNQALARMFGIEGQLEDRQRIGWKLVYTDHEDD 1066
Query: 738 VMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
V+++GDDPW EF N V I I + +EV++M++
Sbjct: 1067 VLLLGDDPWEEFVNCVRCIRILSPQEVQQMSL 1098
>gi|326497439|dbj|BAK05809.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1083
Score = 318 bits (815), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 166/350 (47%), Positives = 231/350 (66%), Gaps = 10/350 (2%)
Query: 55 SSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASS-SAFPPIEVPNF-DLQPQIFC 112
S + ELW+ACAGPL +LP G++VVYFPQGH EQVA+S ++P++ +L ++ C
Sbjct: 18 SRVNQELWYACAGPLVALPPPGSLVVYFPQGHSEQVAASMRKDADAQIPSYPNLPSKLIC 77
Query: 113 KVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMF 172
+ V + ++ E DEVY ++ L P + + E +L + + K F
Sbjct: 78 ILHSVTMQSDPETDEVYARMTLQPVSNVTQCDKEILLASELALKQ-------NKPQTEFF 130
Query: 173 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQP 232
CKTLTASDTSTHGGFSVPRRAAE FP LD+ Q P+QEL A+DLH W FRHI+RGQP
Sbjct: 131 CKTLTASDTSTHGGFSVPRRAAERIFPRLDFSLQPPAQELQARDLHDTIWTFRHIFRGQP 190
Query: 233 RRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYP 292
+RHLLTTGWS+F+S K L++GD+VLF+R +L LGIRR+ + L S+LS + +
Sbjct: 191 KRHLLTTGWSLFISGKRLIAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHI 250
Query: 293 NVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIM-NPICIGTRFKMRFEMDDS 351
VL+ A+A + S F +FY+PRA+ ++FVIP+ KY K + N + +G RF+M FE ++S
Sbjct: 251 GVLAAAAHAAANNSQFTIFYNPRASPSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEES 310
Query: 352 PERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
RR G +TGI+DLDP RW NS+WR + V WDE S+ + +VS W+I+
Sbjct: 311 GTRRYMGTITGISDLDPVRWKNSQWRNIQVAWDEAAPSERRTRVSLWDIE 360
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 76/119 (63%), Gaps = 9/119 (7%)
Query: 666 SETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK 725
S P P+ Q R+ TKVHK+G+ VGR+ID+ R +GY++L ++ +F +EG L D ++
Sbjct: 959 SRAPAPAHQR--MRTYTKVHKRGA-VGRSIDMNRYSGYDELKHDIARMFGIEGQLGDQSR 1015
Query: 726 -GWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYT-QEEVEKMTIGTTDD----TQSC 778
GW+++Y D E DV++VGDDPW +F N V I I + QEE++ +G D Q+C
Sbjct: 1016 VGWKLVYEDHEKDVLLVGDDPWEDFLNCVRCIRILSPQEEMQMRLVGDFGDGFLPNQAC 1074
>gi|379323204|gb|AFD01301.1| auxin response factor 5-3 [Brassica rapa subsp. pekinensis]
Length = 470
Score = 318 bits (814), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 171/350 (48%), Positives = 225/350 (64%), Gaps = 22/350 (6%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVA-SSSAFPPIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL LP+ G++V YF QGH EQVA S+ +VPN+ +L Q+ C+V +V
Sbjct: 48 ELWHACAGPLVCLPQVGSLVYYFSQGHSEQVAVSTRRSATTQVPNYPNLPSQLMCQVHNV 107
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
L A+K++DE+Y Q++L P D+ + G + +K FCKTLT
Sbjct: 108 TLHADKDSDEIYAQMSLQP----------VHSERDVFPVPDFGLLNRSKHPAEFFCKTLT 157
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
ASDTSTHGGFSVPRRAAE FPPLDY Q P+QELV +DLH W FRHIYRGQP+RHLL
Sbjct: 158 ASDTSTHGGFSVPRRAAEKLFPPLDYTAQPPTQELVVRDLHENTWTFRHIYRGQPKRHLL 217
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
TTGWS+FV K L +GD+VLF+R + +L +G+RR+ + + LP S+LS + + VL+
Sbjct: 218 TTGWSLFVGSKRLRAGDSVLFIRDEKSQLMVGVRRANRQQTALPSSVLSADSMHIGVLAA 277
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRC 356
A+A + ++ F +FY+PRA A+FVIP KY K I + G RF M FE +DS +R
Sbjct: 278 AAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGAQLSAGMRFGMMFETEDSGKR-- 335
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSL 406
+D+DP RW SKWR L V WDE +D +VSPW+I+ SL
Sbjct: 336 -------SDMDPLRWSGSKWRNLQVEWDEPGCNDKPTRVSPWDIETPESL 378
Score = 57.8 bits (138), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 36/52 (69%), Gaps = 1/52 (1%)
Query: 718 GLLRDP-AKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
GLL P + GW+++Y D E+DV++VGDDPW EF V I I + EVE+M+
Sbjct: 398 GLLTRPQSSGWKLVYVDYESDVLLVGDDPWEEFVGCVRCIRILSPTEVEQMS 449
>gi|413935566|gb|AFW70117.1| hypothetical protein ZEAMMB73_866690 [Zea mays]
Length = 1147
Score = 317 bits (812), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 171/351 (48%), Positives = 229/351 (65%), Gaps = 17/351 (4%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCK 113
+I +LW+ACAGPL SLP G++VVYFPQGH EQVA+S VP++ +L ++ C
Sbjct: 40 AINADLWYACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDIDAHVPSYPNLPSKLICL 99
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHM-- 171
+ V L A+ + DEVY Q+ L P + EA QL +L + + P M
Sbjct: 100 LHSVTLHADPDTDEVYAQMTLQP---VNTYGKEALQLSELALKH---------ARPQMEF 147
Query: 172 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQ 231
FCKTLTASDTSTHGGFSVPRRAAE PPLD+ Q P+QEL A+D+H W FRHI+RGQ
Sbjct: 148 FCKTLTASDTSTHGGFSVPRRAAEKILPPLDFGMQPPAQELQARDIHDNVWTFRHIFRGQ 207
Query: 232 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSY 291
P+RHLLTTGWS+FV K L +GD+V+F+R + +L LGIRR+ + + S+LS + +
Sbjct: 208 PKRHLLTTGWSLFVGGKRLFAGDSVIFVRDERQQLLLGIRRASRQPTNISSSVLSSDSMH 267
Query: 292 PNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIM-NPICIGTRFKMRFEMDD 350
VL+ A+A + S F +FY+PRA+ +FVIP+ K+ K + N I +G RF+M FE ++
Sbjct: 268 IGVLAAAAHAAANNSPFTIFYNPRASPTEFVIPFAKFQKALYSNQISLGMRFRMMFETEE 327
Query: 351 SPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
RR G +TGITDLDP RW NS+WR L V WDE + + +VS WEI+
Sbjct: 328 LGMRRYMGTITGITDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSMWEIE 378
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 67/92 (72%), Gaps = 2/92 (2%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSEND 737
R+ TKV+K+G+ VGR+ID+ R +GY +L + +F +EG L D + GW+++YTD E+D
Sbjct: 1014 RTFTKVYKRGA-VGRSIDIGRFSGYEELKHAVARMFGIEGQLEDRQRIGWKLVYTDHEDD 1072
Query: 738 VMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
V+++GDDPW EF N V I I + +EV++M++
Sbjct: 1073 VLLLGDDPWEEFVNCVKCIRILSPQEVQQMSL 1104
>gi|301793213|emb|CBA11997.1| putative auxin response factor 6, partial [Cabomba aquatica]
Length = 856
Score = 315 bits (807), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 157/310 (50%), Positives = 212/310 (68%), Gaps = 12/310 (3%)
Query: 100 EVPNF-DLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEE 158
+PN+ L PQ+ C++ DV + A+ E DEVY Q+ L P L ++ +D + E
Sbjct: 8 HIPNYPSLPPQLICQLHDVIMHADAETDEVYAQMTLQP--------LTLQEQKDAYLPAE 59
Query: 159 GGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLH 218
G +P++ + FCK LTASDTSTHGGFSVPRRAAE FPPLD+ QQ PSQEL+A+DLH
Sbjct: 60 LG--TPSRQPTNYFCKRLTASDTSTHGGFSVPRRAAEKVFPPLDFTQQPPSQELIARDLH 117
Query: 219 GVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRN 278
G EW+FRHI+RGQP+RHLLTTGWS+FVS K LV+GDAV+F+ + +L LGIRR +P++
Sbjct: 118 GNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDAVIFIWNEKNQLLLGIRRGNRPQS 177
Query: 279 GLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-IC 337
+P S+LS + + +L+ A+A +T S F VFY PRA+ ++FVIP +Y K + + I
Sbjct: 178 VMPSSVLSSDSMHIGLLAAAAHAAATNSRFTVFYXPRASPSEFVIPLTRYAKAVFHTRIS 237
Query: 338 IGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSP 397
+G RF+M FE ++S RR G +TGI DLDP RWPNS WR + V WDE + Q +VS
Sbjct: 238 VGMRFRMLFETEESSVRRYMGTITGICDLDPARWPNSHWRSIKVGWDESTAGERQPRVSL 297
Query: 398 WEIDRSVSLP 407
WEI+ + P
Sbjct: 298 WEIEPLTTFP 307
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 72/117 (61%), Gaps = 2/117 (1%)
Query: 652 GTAAGCKLFGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELE 711
G+++GC + + P R+ KVHK GS GR++D+ + Y++L SEL
Sbjct: 696 GSSSGCFMDENGFLTSPDDVGLVDPPDRTFVKVHKLGS-YGRSLDITNFSSYHELRSELA 754
Query: 712 HLFNMEGLLRDPAK-GWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
+F +EG L DP + GW++++ D ENDV+++GDDPW EF N V I I + +EV++M
Sbjct: 755 SMFGLEGQLEDPLRSGWQLVFVDRENDVLLLGDDPWQEFVNNVWCIKILSPQEVQQM 811
>gi|222617072|gb|EEE53204.1| hypothetical protein OsJ_36082 [Oryza sativa Japonica Group]
Length = 826
Score = 315 bits (806), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 210/611 (34%), Positives = 309/611 (50%), Gaps = 69/611 (11%)
Query: 101 VPNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGG 160
P ++L +I CKV++V+L A + DEVY Q+ LLP+ + +G + V+EE
Sbjct: 41 APLYNLPWKIPCKVMNVELKAEPDTDEVYAQLTLLPEKQQDGNGSGNGNVSKDKVEEEEV 100
Query: 161 GRSPTKSTP--HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPL----------------- 201
P H FCKTLTASDTSTHGGFSV RR A++C PPL
Sbjct: 101 VPPAATERPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLYSFFDRLIVAMPLTSLL 160
Query: 202 --DYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFL 259
D Q P+QELVAKDLHGVEWRFRHI+RGQPRRHLL +GWS+FVS K LV+GDA +FL
Sbjct: 161 DQDMSQHPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFL 220
Query: 260 RGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHA 319
RG++GELR+G+RR+++ + +P S++S + + VL+ +AV+T +MF V+Y PR + +
Sbjct: 221 RGENGELRVGVRRAMRQQANIPSSVISSHSMHLGVLATAWHAVNTGTMFTVYYKPRTSPS 280
Query: 320 DFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCL 379
+FV+P Y + + IG RFKM FE +++ E+R G + G+ D DP W +SKWR L
Sbjct: 281 EFVVPRDLYKESLKRNHSIGMRFKMTFEGEEAAEQRFTGTIVGVGDSDPSGWADSKWRSL 340
Query: 380 MVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSAR--G 437
VRWDE ++VSPW+I+ + S P++ +PR K+ R + A PD +
Sbjct: 341 KVRWDEAASVPRPDRVSPWQIEPANSPSPVNPLPAPRTKRARPNVLASSPDLSAVNKEVA 400
Query: 438 GGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHPLGFEMRAPAHQSLALNGIRKDNI 497
V+ + + QEN+ S + +N M + K+N+
Sbjct: 401 SKVMANSQQNGLPRAFHSQENMNLRSRFGDSNELNTSQKLTMWSSGSNQ------EKNNV 454
Query: 498 NELVRALPTSYTGFVESNRFPKVLQGQEIC-----PLRSLTGKVDLNL-GTWGKPNFGCN 551
+ S+ + ++L G + PL S ++ N TW N
Sbjct: 455 SVQRELGSQSWMQMRRPDGSSEILSGFQPLKDTRNPLSSFPSQISGNRSNTW-------N 507
Query: 552 SMNMY---QASKPNIYPPPSESLSNMFFPYGDMPKTVQHHTMPPYASNLQRE-NVKL--N 605
++N++ Q + N+YP ++ P Q++ M P + QR N K N
Sbjct: 508 TINVHYPDQNANHNMYP----GTWSLMPPNTGFGVNQQNYLMTPDITLPQRSLNAKFGGN 563
Query: 606 SSSIQMPAIGAEIRKANLLNEHKPVENI---------PTP-TFKANMRSHKDGSFNGTAA 655
+ + A G + R + L +P +I P P N++ K S
Sbjct: 564 GAFTSLRAHGIDQRSSGWLGHIEPSSHIDDASSSLIKPQPLVIDHNVQKAKGSS------ 617
Query: 656 GCKLFGFSLTS 666
C LFG SL S
Sbjct: 618 -CMLFGISLDS 627
Score = 120 bits (301), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 72/98 (73%)
Query: 674 QSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTD 733
Q+ RSC KVHKQG +GR+IDL + Y++L++EL+ +F+ G L +K W ++YTD
Sbjct: 693 QNGSSRSCKKVHKQGIALGRSIDLTKFTCYDELIAELDQMFDFNGELNSSSKNWMVVYTD 752
Query: 734 SENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGT 771
+E D+M+VGDDPW+EFCN V KI IYT+EEV+KM G
Sbjct: 753 NEGDMMLVGDDPWNEFCNMVHKIFIYTREEVQKMNPGA 790
>gi|224085812|ref|XP_002307706.1| predicted protein [Populus trichocarpa]
gi|222857155|gb|EEE94702.1| predicted protein [Populus trichocarpa]
Length = 363
Score = 314 bits (804), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 173/359 (48%), Positives = 232/359 (64%), Gaps = 28/359 (7%)
Query: 51 SSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPI-EVPNF-DLQP 108
S + +I ELW+ACAGPL SLP+ G++V YFPQGH EQVA S+ ++PN+ +L
Sbjct: 11 SGIRKAINSELWYACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTRRSATSQIPNYPNLPS 70
Query: 109 QIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKST 168
Q+ C+V +V L A+K+ DE+Y Q++L P +N E +D+ + G R P+K
Sbjct: 71 QLLCQVHNVTLHADKDTDEIYAQMSLQP------VNTE----KDVFPIPDFGLR-PSKHP 119
Query: 169 PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIY 228
FCKTLTASDTSTHGGFSVPRRAAE FPPLDY Q P+QELV +DLH W FRHIY
Sbjct: 120 SEFFCKTLTASDTSTHGGFSVPRRAAEKLFPPLDYTMQPPTQELVVRDLHDNTWTFRHIY 179
Query: 229 RGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQ 288
RGQP+RHLLTTGWS+FV K L +GD+VLF+R + +L +G+RR+ + + LP S+LS
Sbjct: 180 RGQPKRHLLTTGWSLFVGSKRLKAGDSVLFIRDEKSQLMVGVRRANRQQTTLPSSVLSAD 239
Query: 289 NSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIM-NPICIGTRFKMRFE 347
+ + VL+ A+A + +S F +FY+PRA +DFVIP K+ K + + +G RF M FE
Sbjct: 240 SMHIGVLAAAAHATANRSPFTIFYNPRACPSDFVIPLIKFRKAVFGTQVSVGMRFGMMFE 299
Query: 348 MDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSL 406
++S +RR G + GI+DL V WDE SD Q +VS WEI+ SL
Sbjct: 300 TEESGKRRYMGTIVGISDL--------------VEWDEPGCSDKQNRVSSWEIETPESL 344
>gi|449462567|ref|XP_004149012.1| PREDICTED: auxin response factor 9-like [Cucumis sativus]
Length = 641
Score = 313 bits (802), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 162/332 (48%), Positives = 225/332 (67%), Gaps = 15/332 (4%)
Query: 100 EVPNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEG 159
++P F+L P+I C+VVD +LLA +++DEVY Q+ L+P EA Q L E
Sbjct: 14 KLPLFNLPPKILCQVVDTRLLAEQDSDEVYAQITLMP---------EANQA--LPSTFEP 62
Query: 160 GGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHG 219
K+ H FCK LTASDTSTHGGFSV R+ A +C PPLD QQ P+QELVAKDLHG
Sbjct: 63 PLIECRKTKVHSFCKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAKDLHG 122
Query: 220 VEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNG 279
EWRF+HI+RGQPRRHLLTTGWS FV+ K LV+GD+ +FLRG++GELR+G+RR + ++
Sbjct: 123 YEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDSFVFLRGENGELRVGVRRLARQQSS 182
Query: 280 LPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIG 339
+P S++S + + VL+ ++AVST++ F V+Y PRA+ F++ KY++ + N +G
Sbjct: 183 MPSSVISSHSMHLGVLATASHAVSTQTRFVVYYKPRASQ--FIVSLSKYMEAMNNKFMVG 240
Query: 340 TRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWE 399
RFKMRFE ++SPERR +G + G+ D+ P+ WPNS+WR L V+WDE ++VSPWE
Sbjct: 241 MRFKMRFEGEESPERRFSGTIVGVDDMSPH-WPNSEWRSLRVQWDELASIQRPDRVSPWE 299
Query: 400 IDRSVS-LPPLSIQSSPRMKKLRTGLQAPPPD 430
I+ V+ P + S + K+ R L+ P D
Sbjct: 300 IEPFVAPTPSIPHSISVKNKRPRPPLEIPDSD 331
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/83 (49%), Positives = 59/83 (71%), Gaps = 1/83 (1%)
Query: 683 KVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVG 742
KV QG VGRA+DL L GY L+ ELE +F+++G LR P W I++TD E D+M++G
Sbjct: 534 KVQMQGMAVGRAVDLTTLEGYGQLIDELEKMFDIKGELR-PRNKWEIVFTDDEGDMMLMG 592
Query: 743 DDPWHEFCNEVSKIHIYTQEEVE 765
D PW EFCN V +I+I++ ++V+
Sbjct: 593 DYPWQEFCNMVRRIYIWSSQDVK 615
>gi|255564663|ref|XP_002523326.1| Auxin response factor, putative [Ricinus communis]
gi|223537414|gb|EEF39042.1| Auxin response factor, putative [Ricinus communis]
Length = 667
Score = 312 bits (800), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 157/327 (48%), Positives = 213/327 (65%), Gaps = 19/327 (5%)
Query: 86 HLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNL 145
+L+ AS++ ++P F+L +I C+VV + LLA +E DEVY Q+ L P
Sbjct: 64 YLQLEASTNQELTQQIPKFNLPSKILCRVVHIHLLAEQETDEVYAQITLHP--------- 114
Query: 146 EAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQ 205
E Q E D+ P K H FCK LTASDTSTHGGFSV R+ A +C PPLD Q
Sbjct: 115 EVDQTEPTSPDQ--CTPEPQKRPVHSFCKILTASDTSTHGGFSVLRKHATECLPPLDMNQ 172
Query: 206 QRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGE 265
P+QELVAKDLHG EWRF+HI+RGQPRRHLLTTGWS FV+ K LV+GDA +FLR +GE
Sbjct: 173 SIPTQELVAKDLHGYEWRFKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRSDNGE 232
Query: 266 LRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPY 325
LR+G+RR + ++ +P S++S Q+ + VL+ ++AV+T+++F V+Y PR + F+I
Sbjct: 233 LRVGVRRLARQQSPMPSSVISSQSMHLGVLATASHAVTTQTLFVVYYKPRTSQ--FIIGL 290
Query: 326 QKYVKIIMNPICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDE 385
KY++ + + +G RFKMRFE +DSPERR G + G+ D P W SKWR L ++WDE
Sbjct: 291 NKYLEAVNHGFSLGMRFKMRFEGEDSPERRFMGTIVGVGDFSP-EWSGSKWRSLKIQWDE 349
Query: 386 CIGSDHQEQVSPWEID-----RSVSLP 407
++VSPWEI+ SV+LP
Sbjct: 350 PATVQRPDRVSPWEIEPFAASASVNLP 376
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/102 (50%), Positives = 65/102 (63%), Gaps = 4/102 (3%)
Query: 669 PTPSSQSPGK---RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK 725
P + PG R+ TKV QG VGRA+DL L GY DL+ ELE LF ++G L K
Sbjct: 539 PKETHSKPGTTSTRTRTKVQMQGVAVGRAVDLTALKGYGDLIKELEELFEIKGELSTREK 598
Query: 726 GWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
W +++TD E D+M+VGDDPW EFC V KI IY+ EE +K+
Sbjct: 599 -WAVVFTDDEGDMMLVGDDPWREFCKMVRKILIYSSEEAKKL 639
>gi|295844314|gb|ADG43154.1| auxin response factor 20 [Zea mays]
Length = 1149
Score = 312 bits (800), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 171/353 (48%), Positives = 229/353 (64%), Gaps = 19/353 (5%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCK 113
+I +LW+ACAGPL SLP G++VVYFPQGH EQVA+S VP++ +L ++ C
Sbjct: 40 AINADLWYACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKDIDAHVPSYPNLPSKLICL 99
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHM-- 171
+ V L A+ + DEVY Q+ L P + EA QL +L + + P M
Sbjct: 100 LHSVTLHADPDTDEVYAQMTLQP---VNTYGKEALQLSELALKH---------ARPQMEF 147
Query: 172 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQ 231
FCKTLTASDTSTHGGFSVPRRAAE PPLD+ Q P+QEL A+D+H W FRHI+RGQ
Sbjct: 148 FCKTLTASDTSTHGGFSVPRRAAEKILPPLDFGMQPPAQELQARDIHDNVWTFRHIFRGQ 207
Query: 232 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSY 291
P+RHLLTTGWS+FV K L +GD+V+F+R + +L LGIRR+ + + S+LS + +
Sbjct: 208 PKRHLLTTGWSLFVGGKRLFAGDSVIFVRDERQQLLLGIRRASRQPTNISSSVLSSDSMH 267
Query: 292 PNVLSVVANAVSTKSMFHVFYSPR--ATHADFVIPYQKYVKIIM-NPICIGTRFKMRFEM 348
VL+ A+A + S F +FY+PR A+ +FVIP+ K+ K + N I +G RF+M FE
Sbjct: 268 IGVLAAAAHAAANNSPFTIFYNPRRVASPTEFVIPFAKFQKALYSNQISLGMRFRMMFET 327
Query: 349 DDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
++ RR G +TGITDLDP RW NS+WR L V WDE + + +VS WEI+
Sbjct: 328 EELGMRRYMGTITGITDLDPVRWKNSQWRNLQVGWDESAAGERRNRVSMWEIE 380
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 67/92 (72%), Gaps = 2/92 (2%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSEND 737
R+ TKV+K+G+ VGR+ID+ R +GY +L + +F +EG L D + GW+++YTD E+D
Sbjct: 1016 RTFTKVYKRGA-VGRSIDIGRFSGYEELKHAVARMFGIEGQLEDRQRIGWKLVYTDHEDD 1074
Query: 738 VMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
V+++GDDPW EF N V I I + +EV++M++
Sbjct: 1075 VLLLGDDPWEEFVNCVKCIRILSPQEVQQMSL 1106
>gi|218186846|gb|EEC69273.1| hypothetical protein OsI_38317 [Oryza sativa Indica Group]
Length = 840
Score = 312 bits (799), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 209/609 (34%), Positives = 308/609 (50%), Gaps = 72/609 (11%)
Query: 101 VPNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGG 160
P ++L +I CKV++V+L A + DEVY Q+ LLP+ N+ ++E+ V
Sbjct: 62 APLYNLPWKIPCKVMNVELKAEPDTDEVYAQLTLLPEKWYG--NVSKDKVEEEEVVPPAA 119
Query: 161 GRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPL------------------- 201
P H FCKTLTASDTSTHGGFSV RR A++C PPL
Sbjct: 120 TERPRV---HSFCKTLTASDTSTHGGFSVLRRHADECLPPLYSFFDRLIVAMPLTSLLDQ 176
Query: 202 DYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRG 261
D Q P+QELVAKDLHGVEWRFRHI+RGQPRRHLL +GWS+FVS K LV+GDA +FLRG
Sbjct: 177 DMSQHPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRG 236
Query: 262 KDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADF 321
++GELR+G+RR+++ + +P S++S + + VL+ +AV+T +MF V+Y PR + ++F
Sbjct: 237 ENGELRVGVRRAMRQQANIPSSVISSHSMHLGVLATAWHAVNTGTMFTVYYKPRTSPSEF 296
Query: 322 VIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMV 381
V+P Y + + IG RFKM FE +++ E+R G + G+ D DP W +SKWR L V
Sbjct: 297 VVPRDLYKESLKRNHSIGMRFKMTFEGEEAAEQRFTGTIVGVGDSDPSGWADSKWRSLKV 356
Query: 382 RWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSAR--GGG 439
RWDE ++VSPW+I+ + S P++ +PR K+ R + A PD +
Sbjct: 357 RWDEAASVPRPDRVSPWQIEPANSPSPVNPLPAPRTKRARPNVLASSPDLSAVNKEVASK 416
Query: 440 VLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHPLGFEMRAPAHQSLALNGIRKDNINE 499
V+ + + QEN+ S + +N M + K+N++
Sbjct: 417 VMANSQQNGLPRAFHSQENMNLRSRFGDSNELNTSQKLTMWSSGSNQ------EKNNVSV 470
Query: 500 LVRALPTSYTGFVESNRFPKVLQGQEIC-----PLRSLTGKVDLNL-GTWGKPNFGCNSM 553
S+ + ++L G + PL S ++ N TW N++
Sbjct: 471 QRELGSQSWMQMRSPDGSSEILSGFQPLKDTRNPLSSFPSQISGNRSNTW-------NTI 523
Query: 554 NMY---QASKPNIYPPPSESLSNMFFPYGDMPKTVQHHTMPPYASNLQRE-NVKL--NSS 607
N++ Q + N+YP ++ P Q++ M P + QR N K N +
Sbjct: 524 NVHYPDQNANHNMYP----GTWSLMPPNTGFGVNQQNYLMTPDITLPQRSLNAKFGGNGA 579
Query: 608 SIQMPAIGAEIRKANLLNEHKPVENI---------PTP-TFKANMRSHKDGSFNGTAAGC 657
+ A G + R + L +P +I P P N++ K S C
Sbjct: 580 FTSLRAHGIDQRSSGWLGHIEPSSHIDDASSSLIKPQPLVIDHNVQKAKGSS-------C 632
Query: 658 KLFGFSLTS 666
LFG SL S
Sbjct: 633 MLFGISLDS 641
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/98 (53%), Positives = 72/98 (73%)
Query: 674 QSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTD 733
Q+ RSC KVHKQG +GR+IDL + Y++L++EL+ +F+ G L +K W ++YTD
Sbjct: 707 QNGSSRSCKKVHKQGIALGRSIDLTKFTCYDELIAELDQMFDFNGELNSSSKNWMVVYTD 766
Query: 734 SENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGT 771
+E D+M+VGDDPW+EFCN V KI IYT+EEV+KM G
Sbjct: 767 NEGDMMLVGDDPWNEFCNMVHKIFIYTREEVQKMNPGA 804
>gi|301793231|emb|CBA12006.1| putative auxin response factor 2/1/9, partial [Cycas rumphii]
Length = 775
Score = 308 bits (790), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 152/290 (52%), Positives = 204/290 (70%), Gaps = 7/290 (2%)
Query: 172 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQ 231
FCKTLTASDTSTHGGFSV RR A++C PPLD QQ P+QELVAKDLHGV W FRHI+RGQ
Sbjct: 18 FCKTLTASDTSTHGGFSVLRRHADECLPPLDMNQQPPAQELVAKDLHGVGWHFRHIFRGQ 77
Query: 232 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSY 291
PRRHLLTTGWS+FVS K L++GDA +FLRGK+GELR+G+RR+++ +N + S++S + +
Sbjct: 78 PRRHLLTTGWSVFVSSKRLIAGDAFIFLRGKNGELRVGVRRAMRQQNNVSSSVISSHSMH 137
Query: 292 PNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDS 351
V++ ++AVST +MF V+Y PR + + F+IPY+KY++ + N +G RFKMRFE +++
Sbjct: 138 LGVVATASHAVSTHTMFTVYYKPRTSPSGFIIPYEKYMEAMNNNFSVGMRFKMRFEGEEA 197
Query: 352 PERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSI 411
PE+R G + G D DP RWP SKWR L V+WDE E+VSPWEI+ + LS
Sbjct: 198 PEQRFIGTIIGTGDSDPVRWPGSKWRSLKVQWDEISVVARPERVSPWEIELIATAAALSP 257
Query: 412 QSSPRMKKLRTGLQAPPPDYPVSARGGGV----LDFEESVRSSKVLQGQE 457
R K+ R L P P+ + G ++F ++ + S+VLQGQE
Sbjct: 258 LPVSRNKRPRENLL---PSSPILSILGSFKEDSMNFTQAHKFSRVLQGQE 304
Score = 122 bits (307), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 96/176 (54%), Gaps = 13/176 (7%)
Query: 627 HKPVENIPTPT-FKANMRSHKDGSFNGTAAGCKLFGFSLTSETPTP-SSQSPGKRSCTKV 684
H P EN+ P K + + C+ +S S T ++S RS TKV
Sbjct: 584 HAPRENLSQPAELDQQSEPSKTSKSDPPTSSCEREKWSQRSSKETQFRAESNSFRSHTKV 643
Query: 685 HKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGDD 744
KQGS GRA+DL + GY + + ELE +FN+EG L DP KGW ++YTD+E D+M+VGD
Sbjct: 644 QKQGSAFGRAVDLMKFEGYPEFIHELEQMFNIEGELEDPRKGWLVVYTDNEGDMMLVGDH 703
Query: 745 PWH--------EFCNEVSKIHIYTQEEVEKMTIGTTDDTQSCLDQA---PVIMEVS 789
PW EFC KI+IYT+EEVEKMT T D + ++ PVI E S
Sbjct: 704 PWQEFLHPINREFCRIAHKIYIYTREEVEKMTPWQTLDGKKIEGRSVDGPVIRETS 759
>gi|255573830|ref|XP_002527834.1| Auxin response factor, putative [Ricinus communis]
gi|223532758|gb|EEF34537.1| Auxin response factor, putative [Ricinus communis]
Length = 620
Score = 308 bits (788), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 167/405 (41%), Positives = 242/405 (59%), Gaps = 46/405 (11%)
Query: 54 SSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIE------VPNFDLQ 107
++++Y ELW ACAGPL +LP++G V YFPQGH+EQ+ + PI+ + + +L
Sbjct: 42 NNALYKELWDACAGPLVTLPREGERVYYFPQGHIEQLGA-----PIQQQSEHQMASLNLP 96
Query: 108 PQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKS 167
+I CKV++VQ A D+VY Q+ LLP+PE Q++ + D P +
Sbjct: 97 SKILCKVINVQCKAEPITDQVYAQIMLLPEPE---------QIDVISPDPPLP--EPERC 145
Query: 168 TPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHI 227
H F + LT SD S+H F V ++ AE C PPLD QQ P QELVA DL+G +W F+HI
Sbjct: 146 VVHSFRRILTVSDISSHDHFFVDQKHAEHCLPPLDMSQQLPWQELVATDLNGNKWHFQHI 205
Query: 228 YRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSK 287
++G+ +HLLTTGWS FVS K LVSGD +FLRG++GELR+G+RR + + + S S
Sbjct: 206 FQGKSNKHLLTTGWSAFVSSKKLVSGDMFIFLRGENGELRVGVRRLMGRKTNILSSATSN 265
Query: 288 QNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFE 347
Q + ++L+V + A+ST S+F VFY PR + ++F++ KY++ + CIG RF MRFE
Sbjct: 266 QIRH-SLLAVASYAISTGSLFCVFYEPRTSRSEFIVSVNKYIEARNHKFCIGMRFLMRFE 324
Query: 348 MDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDR----- 402
++ P R NG + + + P RWP+S+WRC VRWDE H E+VSPWE++
Sbjct: 325 GEEVPIERINGTIVSM-ETSP-RWPDSEWRCFKVRWDEPSLIVHPERVSPWEMENISSSS 382
Query: 403 ---------------SVSLPPLSIQSSPRMKKLR-TGLQAPPPDY 431
++ + P S Q PR+K+LR T + PD+
Sbjct: 383 QPVPRTKRSRSSSPGAMEISPSSTQPGPRIKQLRSTVFLSQTPDF 427
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 52/80 (65%)
Query: 680 SCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVM 739
SC +V QG +GR+IDL + + DL+ ELE++F +EG L K W I+YTD+++++
Sbjct: 538 SCAEVRMQGIALGRSIDLTKFKCHEDLIKELENMFEIEGELSGSTKKWLIVYTDADSEMK 597
Query: 740 VVGDDPWHEFCNEVSKIHIY 759
+VGD W CN V KI IY
Sbjct: 598 LVGDYQWEVVCNMVKKILIY 617
>gi|357127755|ref|XP_003565543.1| PREDICTED: auxin response factor 1-like [Brachypodium distachyon]
Length = 701
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 161/374 (43%), Positives = 224/374 (59%), Gaps = 18/374 (4%)
Query: 55 SSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPI--EVPNFDLQPQIFC 112
+ ++ ELW ACAGPL LP+ G V YF QGHLEQV S + ++ F + +I C
Sbjct: 9 AELFSELWRACAGPLVELPQPGQRVFYFLQGHLEQVQQPSDQKVLADQIKMFQVPYKILC 68
Query: 113 KVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMF 172
+VV+V+L A E +EVY Q+ LLP+ + E L + H F
Sbjct: 69 RVVNVELKAEVETEEVYAQITLLPEQDQEYLPSSPDPPLP----------EVRRPVVHSF 118
Query: 173 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQP 232
K LT SDTSTHGGFSV RR A +C PPLD P+QEL+ KD+ G EWRF+HIYRGQP
Sbjct: 119 SKILTPSDTSTHGGFSVLRRHANECLPPLDMSMPTPTQELICKDILGSEWRFKHIYRGQP 178
Query: 233 RRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYP 292
RRHLLTTGWS FV+ K LV GDA ++LR ++GE R+G+R VQ R +P S++S Q+ +
Sbjct: 179 RRHLLTTGWSTFVTSKKLVYGDAFVYLRTEEGEQRVGVRHHVQKRTAMPSSVMSSQSMHL 238
Query: 293 NVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSP 352
VL+ ++A+ TKS+F V+Y PR + + +++ KY +G RFKM FE ++ P
Sbjct: 239 GVLASASHALQTKSIFLVYYRPRVSQSQYIVNVNKYFLTSKLRYTVGVRFKMSFEGEEVP 298
Query: 353 ERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID-----RSVSLP 407
++ +G + G L P +W S+W+ V+WD+ + E+VSPWEI+ S S
Sbjct: 299 VKKFSGTIVGDGALSP-QWSCSEWKSKKVQWDDPANCNGPERVSPWEIEPADGAASASTI 357
Query: 408 PLSIQSSPRMKKLR 421
+ +QSS R K+ R
Sbjct: 358 NVPLQSSIRNKRPR 371
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 61/96 (63%), Gaps = 5/96 (5%)
Query: 672 SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILY 731
S+QS R+ KV G+ VGRA+DL L+GY L+ ELE +F+ ++D + +++ +
Sbjct: 589 SNQSCIARNRVKVQMHGNAVGRAVDLANLDGYEQLIRELEQMFD----IKDIKQNFKVAF 644
Query: 732 TDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
D++ D M VGDDPW EFC V KI IY EE EKM
Sbjct: 645 ADNDGDTMKVGDDPWMEFCRMVKKIVIYPLEE-EKM 679
>gi|414877786|tpg|DAA54917.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 750
Score = 306 bits (784), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 157/331 (47%), Positives = 209/331 (63%), Gaps = 20/331 (6%)
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTP----- 169
++++L + DEVY Q+ LLP + KQ E+ E + P
Sbjct: 1 MNIELKVEPDTDEVYAQLTLLP---------DKKQDENTSTTVEEEEVVVPPALPATNEG 51
Query: 170 ---HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRH 226
H FCKTLTASDTSTHGGFSV RR A++C PPLD Q P+QELVAKDLHG EWRFRH
Sbjct: 52 PHIHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFRH 111
Query: 227 IYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILS 286
I+RGQPRRHLL +GWS+FVS K LV+GDA +FLRG++GELR+G+RR+++ + +P S++S
Sbjct: 112 IFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENGELRVGVRRALRHQTTIPSSVIS 171
Query: 287 KQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRF 346
N + VL+ +AV+T SMF V+Y PR + A+FV+ +Y + + IG RFKMRF
Sbjct: 172 SHNMHLGVLATAWHAVNTDSMFTVYYKPRTSPAEFVVSRDRYYESLKRNYSIGMRFKMRF 231
Query: 347 EMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSL 406
E +++ E+R G + GI DP W +SKWR L VRWDE E+VSPW+I+ SVS
Sbjct: 232 EGEEAAEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEPSVS- 290
Query: 407 PPLSIQSSP-RMKKLRTGLQAPPPDYPVSAR 436
P + P R K+ R+ + A P D R
Sbjct: 291 -PCHVNPLPVRFKRSRSSVNALPSDVSTVTR 320
Score = 127 bits (320), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 75/97 (77%)
Query: 674 QSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTD 733
QS RSC KVHKQGS +GR+IDL + Y++L++EL+ +F+ +G L+ P K W ++YTD
Sbjct: 617 QSSSTRSCKKVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDGELKSPCKSWLVVYTD 676
Query: 734 SENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIG 770
+E D+M+VGDDPW+EFC+ V KI IYT+EEVE+M G
Sbjct: 677 NEGDIMLVGDDPWNEFCDMVHKIFIYTREEVERMNPG 713
>gi|291196875|emb|CAX63123.1| ARF4 protein [Amborella trichopoda]
Length = 431
Score = 305 bits (781), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 189/454 (41%), Positives = 256/454 (56%), Gaps = 47/454 (10%)
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSS 414
RC+GV+TGI D+DP RWP+SKWRCLMVRWDE IG +H+ +VSPWEI+ SV P L++
Sbjct: 1 RCSGVITGIGDIDPLRWPDSKWRCLMVRWDEDIGDEHRVRVSPWEIEPSVLPPALNV--- 57
Query: 415 PRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHP 474
PR+KKLR L + D + GGG+L+ ESVRS KVLQGQE+ G + Y
Sbjct: 58 PRLKKLRPSLPSGAADVVAVSTGGGLLEVRESVRSRKVLQGQEDAGSKTYYYA------- 110
Query: 475 LGFEMRAPAHQSLALNGIRKDNINELVRALPTSYTGFVESNRFPKVLQGQEICPLRSLTG 534
M +H L R RA GF E F KVLQGQEI PL++
Sbjct: 111 -NLRMGPGSHDPTVLGSARMGTNALTGRASDNISIGFGE---FHKVLQGQEIFPLKA--- 163
Query: 535 KVDLNL-GTWGKPNFGCNSMNMYQASKPNIYPPPS-------------ESLSNMFFPYGD 580
+ D+ + G + N G +P SN +F
Sbjct: 164 QCDVPVSGNRSRENNGLRLEFFTGYQRPETVRTEVIDNSTHYQSNLRFYGASNAYFRSNQ 223
Query: 581 MPKTVQHHTMPPYASNLQRENV---KLNSSSIQMPAIGAEIRKANLLNEHKPVENIPTPT 637
+P V H +P +R+N +L SS Q ++ + + ++ V N P+
Sbjct: 224 LPYDV--HNLPIINGLYERQNSWKPELVGSSQQT----MQVTEGSHSSQEDEVLNHLLPS 277
Query: 638 FKANMRSHKDGSFNGTAAGCKLFGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDL 697
+++D + T CKLFG+SLT + ++ KRSCTKVHK GS VGR+IDL
Sbjct: 278 ASVRKMNYQDETLART--NCKLFGYSLTEDNFLSNAS---KRSCTKVHKHGSAVGRSIDL 332
Query: 698 WRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIH 757
+LNGY+DL+SELE +FNMEGLL DP KGWR++YTD+END+++VGDDPW EFC+ V KI
Sbjct: 333 SKLNGYSDLMSELEQIFNMEGLLHDPEKGWRVVYTDNENDMVLVGDDPWQEFCDVVCKIL 392
Query: 758 IYTQEEVEKM--TIGTTDDTQSCLDQAPVIMEVS 789
I TQ++VE M ++ DD QSC ++APV++E+S
Sbjct: 393 ICTQDDVENMSPSMLVNDDAQSCWEEAPVVIELS 426
>gi|8954059|gb|AAF82232.1|AC069143_8 Contains similarity to a non-phototropic hypocotyl 4 (NPH4) protein
from Arabidopsis thaliana gb|AF186466 [Arabidopsis
thaliana]
Length = 1062
Score = 303 bits (775), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 164/346 (47%), Positives = 213/346 (61%), Gaps = 35/346 (10%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNF-DLQPQIFCKVV 115
I +LWHACAGPL SLP G++VVYFPQGH EQVA+S +PN+ +L ++ C +
Sbjct: 20 INSQLWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKQTDFIPNYPNLPSKLICLLH 79
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKT 175
V L A+ E DEVY Q+ L P +L R PT+ FCKT
Sbjct: 80 SVTLHADTETDEVYAQMTLQPVNKLN--------------------RQPTE----FFCKT 115
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
LTASDTSTHGGFSVPRRAAE FPPLD+ Q P+QE+VAKDLH W FRHIYRG
Sbjct: 116 LTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDTTWTFRHIYRG----- 170
Query: 236 LLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVL 295
WS+FVS K L +GD+VLF+R + +L LGIRR+ + L S++S + + +L
Sbjct: 171 -----WSVFVSTKRLFAGDSVLFVRDEKSQLMLGIRRANRQTPTLSSSVISSDSMHIGIL 225
Query: 296 SVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERR 355
+ A+A + S F +F++PRA+ ++FV+P KY K + + +G RF+M FE +D RR
Sbjct: 226 AAAAHANANSSPFTIFFNPRASPSEFVVPLAKYNKALYAQVSLGMRFRMMFETEDCGVRR 285
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
G VTGI+DLDP RW S+WR L V WDE D +VS WEI+
Sbjct: 286 YMGTVTGISDLDPVRWKGSQWRNLQVGWDESTAGDRPSRVSIWEIE 331
Score = 99.4 bits (246), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 69/98 (70%), Gaps = 2/98 (2%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDP-AKGWRILY 731
+Q+ R+ TKV K+GS VGR+ID+ R +GY++L +L +F +EG L DP W+++Y
Sbjct: 928 NQTQRMRTYTKVQKRGS-VGRSIDVTRYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVY 986
Query: 732 TDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
TD END+++VGDDPW EF N V I I + EV++M++
Sbjct: 987 TDHENDILLVGDDPWEEFVNCVQNIKILSSVEVQQMSL 1024
>gi|125550116|gb|EAY95938.1| hypothetical protein OsI_17805 [Oryza sativa Indica Group]
gi|125591966|gb|EAZ32316.1| hypothetical protein OsJ_16524 [Oryza sativa Japonica Group]
Length = 926
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 162/347 (46%), Positives = 211/347 (60%), Gaps = 41/347 (11%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSS-AFPPIEVPNF-DLQPQIFCKV 114
I ELWHACAGPL LP++G++V YFPQGH EQVA+++ P +PN+ +L Q+ C+V
Sbjct: 36 INSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTRKIPNSRIPNYPNLPSQLLCQV 95
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
++ L A+K+ DEVY Q+ L P +N E D+ G + +K FCK
Sbjct: 96 HNITLHADKDTDEVYAQMTLQP------VNSET----DVFPIPTLGAYTKSKHPTEYFCK 145
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
LTASDTSTHGGFSVPRRAAE FP LDY Q P+QEL+ +DLH W FRHIYRGQP+R
Sbjct: 146 NLTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKR 205
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS+FV K L +GD+VLF+ + +G V
Sbjct: 206 HLLTTGWSLFVGAKRLKAGDSVLFI-----SMHIG------------------------V 236
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
L+ A+A S+ S F ++Y+PR + + FVIP +Y K +G RF M FE ++S +R
Sbjct: 237 LAAAAHAASSGSSFTIYYNPRTSPSPFVIPVARYNKATYMQPSVGMRFAMMFETEESSKR 296
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
R G V GI+D DP RWPNSKWR L V WDE + E+VS W+I+
Sbjct: 297 RYTGTVVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIE 343
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 64/108 (59%), Gaps = 2/108 (1%)
Query: 676 PGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKG-WRILYTDS 734
P R+ TKV KQGS VGR+ID+ Y++L S + +F ++G L P W+++Y D
Sbjct: 820 PPVRTYTKVQKQGS-VGRSIDVTGFRNYHELRSAIACMFGLQGKLEHPGSSEWKLVYVDY 878
Query: 735 ENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGTTDDTQSCLDQA 782
ENDV++VGDDPW EF N V I I + EV++M+ C+ A
Sbjct: 879 ENDVLLVGDDPWEEFINCVRCIRILSPSEVQQMSENGMHVLNDCIQAA 926
>gi|414587105|tpg|DAA37676.1| TPA: hypothetical protein ZEAMMB73_822305 [Zea mays]
Length = 285
Score = 300 bits (769), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 148/274 (54%), Positives = 193/274 (70%), Gaps = 16/274 (5%)
Query: 54 SSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIE--VPNFDLQPQIF 111
S ++Y ELWHACAGPL ++P++G V YFPQGH+EQ+ +S+ ++ +P FDL P+I
Sbjct: 16 SDALYQELWHACAGPLVTVPRQGERVYYFPQGHMEQLEASAHHQQLDQYLPMFDLPPKIL 75
Query: 112 CKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHM 171
C+VV+V+L A ++DEVY Q+ L P EA Q E +D E R K T H
Sbjct: 76 CRVVNVELRAEADSDEVYAQIMLQP---------EADQNELTSLDAEPQERE--KCTAHS 124
Query: 172 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQ 231
FCKTLTASDTSTHGGFSV RR AE+C P LD Q P QELVAKDLHG EW FRHI+RGQ
Sbjct: 125 FCKTLTASDTSTHGGFSVLRRHAEECLPQLDMSQNPPCQELVAKDLHGTEWHFRHIFRGQ 184
Query: 232 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSY 291
P+RHLLTTGWS+FVS K LVSGDA +F+RG++GELR+G+RR ++ N +P S++S + +
Sbjct: 185 PKRHLLTTGWSVFVSSKRLVSGDAFIFMRGENGELRVGVRRLMRQVNSMPSSVISSHSMH 244
Query: 292 PNVLSVVANAVSTKSMFHVFYSPRATHADFVIPY 325
VL+ ++A+ST ++F VFY PR D V+ Y
Sbjct: 245 LGVLATASHAISTGTLFSVFYKPR---FDVVLLY 275
>gi|222622145|gb|EEE56277.1| hypothetical protein OsJ_05331 [Oryza sativa Japonica Group]
Length = 1136
Score = 296 bits (757), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 166/359 (46%), Positives = 224/359 (62%), Gaps = 35/359 (9%)
Query: 54 SSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPP-------IEVPNF-D 105
+++I ELWHACAGPL SLP G++VVYFPQGH EQV S+ VP++ +
Sbjct: 38 AAAINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVYKSNIVAASMQKDVDAHVPSYPN 97
Query: 106 LQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPT 165
L ++ C + V L A+ + DEVY Q+ L P + EA Q+ +L + +
Sbjct: 98 LPSKLICLLHGVNLHADPDTDEVYAQMTLQP---VNTYGKEALQISELALKQ-------- 146
Query: 166 KSTPHM--FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWR 223
+ P M FCKTLTASDTSTHGGFSVPRRAAE FPPLD+ Q P+QEL A+D+H W
Sbjct: 147 -ARPQMEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDIHDNVWT 205
Query: 224 FRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDS 283
FRHIYRGQP+RHLLTTGWS+FVS K L +GD+V+ +R + +L LGIRR+ + + S
Sbjct: 206 FRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIVVRDEKHQLLLGIRRANRQPTNISSS 265
Query: 284 ILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIM-NPICIGTRF 342
+LS + + VL+ A+A + S F +FY+PRA+ +FVIP+ KY K + N I +G RF
Sbjct: 266 VLSSDSMHIGVLAAAAHAAANSSPFTIFYNPRASPTEFVIPFAKYQKALYSNQISLGMRF 325
Query: 343 KMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
+M FE ++ RR G +TGI+DLDP V WDE + + +VS WEI+
Sbjct: 326 RMMFETEELGTRRYMGTITGISDLDP------------VGWDESAAGERRNRVSIWEIE 372
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 66/92 (71%), Gaps = 2/92 (2%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSEND 737
R+ TKV+K+G+ VGR+ID+ R +GY +L L +F +EG L D + GW+++Y D E+D
Sbjct: 1003 RTFTKVYKRGA-VGRSIDIGRYSGYEELKHALARMFGIEGQLEDRQRIGWKLVYKDHEDD 1061
Query: 738 VMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
++++GDDPW EF N V I I + +EV++M++
Sbjct: 1062 ILLLGDDPWEEFVNCVRCIRILSPQEVQQMSL 1093
>gi|413934806|gb|AFW69357.1| hypothetical protein ZEAMMB73_033328 [Zea mays]
Length = 975
Score = 295 bits (754), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 158/346 (45%), Positives = 209/346 (60%), Gaps = 49/346 (14%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVD 116
I ELWHACAGPL SLP G++VVYFPQGH EQ +D
Sbjct: 33 INSELWHACAGPLVSLPPAGSLVVYFPQGHSEQF------------------------LD 68
Query: 117 VQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTL 176
++L N + EA QL +L + + P T FCKTL
Sbjct: 69 IKLTVNGDQ-----------------YGKEALQLSELAL------KQPRPQT-EFFCKTL 104
Query: 177 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHL 236
TASDTSTHGGFSVPRRAAE FPPLD+ Q P+QE+ A+DLH W FRHIYRGQP+RHL
Sbjct: 105 TASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIQARDLHDNVWTFRHIYRGQPKRHL 164
Query: 237 LTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLS 296
LTTGWS+FVS K L++GD+V+F+R + +L LG RR+ + + S+LS + + +L+
Sbjct: 165 LTTGWSLFVSGKRLLAGDSVIFVRDEKQQLLLGTRRANRQPTNISSSVLSSDSMHIGILA 224
Query: 297 VVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIM-NPICIGTRFKMRFEMDDSPERR 355
A+A + S F +FY+PRA+ +FV+P+ KY K + N I +G RF+M FE ++ RR
Sbjct: 225 AAAHAAANNSPFTIFYNPRASPTEFVVPFAKYQKALYGNQISLGMRFRMMFETEELGTRR 284
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
G +TGI+DLDP RW NS+WR + V WDE + + +VS WEI+
Sbjct: 285 YMGTITGISDLDPVRWKNSQWRNIQVGWDESAAGERRNRVSIWEIE 330
Score = 97.4 bits (241), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 127/264 (48%), Gaps = 47/264 (17%)
Query: 546 PNFGCNSMNMYQASKPNIYPPPSESLSNMFFPYGDMPKTVQHHTMPPYASNLQRENVKLN 605
PN G + N+ + P YP + S ++++ D + HH+ P N Q++ K
Sbjct: 676 PNAGHVAQNLTNNAPPTDYPETASSATSVWLSQAD---GLLHHSFPMSNFNQQQQMFKAA 732
Query: 606 SSSIQMPA--------------------IGAEIRKANLLNEHKPVENIPTPTFKANMRSH 645
+ + +GA+ +N ++ K +I T N R
Sbjct: 733 APETDIQGADPSNNTLFGINGDGQLGFPMGADDFLSNGIDASKYQGHIST-DIDGNYRIS 791
Query: 646 KDG------------------SFNGTAAGCKLFGF-SLTSETPTPSSQSPGKRSCTKVHK 686
KDG +FN +G GF + TS P P + R+ TKV+K
Sbjct: 792 KDGQQEISSSMVSQSFGASDMAFNSIDSGMNDGGFVNRTSWPPAPPLKR--MRTFTKVYK 849
Query: 687 QGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMVVGDDP 745
+G+ VGR+ID+ + +GY++L L +F+MEG L + + GW+++Y D E+D++++GDDP
Sbjct: 850 RGA-VGRSIDISQFSGYDELKHALARMFSMEGQLEERQRIGWKLVYKDHEDDILLLGDDP 908
Query: 746 WHEFCNEVSKIHIYTQEEVEKMTI 769
W EF N V I I + +EV+++++
Sbjct: 909 WEEFVNCVKCIRILSPQEVQQISL 932
>gi|15219635|ref|NP_174786.1| auxin response factor 14 [Arabidopsis thaliana]
gi|46576662|sp|Q9LQE8.2|ARFN_ARATH RecName: Full=Putative auxin response factor 14
gi|332193688|gb|AEE31809.1| auxin response factor 14 [Arabidopsis thaliana]
Length = 605
Score = 295 bits (754), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 145/348 (41%), Positives = 210/348 (60%), Gaps = 18/348 (5%)
Query: 55 SSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEV-PNFDLQPQIFCK 113
S +Y +LW CAGPL +PK G V YFPQGH+E V +S+ E+ P D ++ C+
Sbjct: 22 SYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPICDFPSKLQCR 81
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFC 173
V+ +QL +DE Y ++ L+P + V ++ + + F
Sbjct: 82 VIAIQLKVENNSDETYAEITLMP--------------DTTQVVIPTQNQNQFRPLVNSFT 127
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
K LTASDTS HGGFSVP++ A +C PPLD Q P+QE++A DLHG +WRFRHIYRG +
Sbjct: 128 KVLTASDTSVHGGFSVPKKHAIECLPPLDMSQPLPTQEILAIDLHGNQWRFRHIYRGTAQ 187
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
RHLLT GW+ F + K LV GD ++F+RG+ GELR+GIRR+ + +P SI+S ++
Sbjct: 188 RHLLTIGWNAFTTSKKLVEGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIVSIESMRHG 247
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
+++ +A + MF V Y PR++ F++ Y K++ ++ N +G+RF MRFE DD E
Sbjct: 248 IIASAKHAFDNQCMFIVVYKPRSSQ--FIVSYDKFLDVVNNKFNVGSRFTMRFEGDDFSE 305
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
RR G + G++D P+ W S+WR L V+WDE QVSPW+I+
Sbjct: 306 RRSFGTIIGVSDFSPH-WKCSEWRSLEVQWDEFASFPRPNQVSPWDIE 352
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 56/112 (50%), Positives = 74/112 (66%), Gaps = 3/112 (2%)
Query: 658 KLFGFS--LTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFN 715
K FG S L S T S Q R+CTKV QG +GRA+DL LNGY+ L+ ELE LF+
Sbjct: 487 KKFGQSQILRSPTEIQSKQFSSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFD 546
Query: 716 MEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
++G L+ W I +T++E D M+VG+DPW EFCN V KI IY++EEV+ +
Sbjct: 547 LKGQLQ-ARNQWEIAFTNNEEDKMLVGEDPWPEFCNMVKKIFIYSKEEVKNL 597
>gi|224129718|ref|XP_002320654.1| predicted protein [Populus trichocarpa]
gi|222861427|gb|EEE98969.1| predicted protein [Populus trichocarpa]
Length = 331
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 147/302 (48%), Positives = 202/302 (66%), Gaps = 10/302 (3%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASS-SAFPPIEVPNFDLQPQIFCKVV 115
+Y ELW+ACAGPL +P+ G+ V YFPQGHLEQVA+ + +P +DL +I CKVV
Sbjct: 1 LYTELWYACAGPLVYVPRVGDKVFYFPQGHLEQVAAFLNEDSKTAMPIYDLPYKILCKVV 60
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKT 175
VQL A + DEV+ + LLP E + L+ K E L + K+ F K
Sbjct: 61 HVQLKAEAKTDEVFAHITLLPVAEGDELS-SNKDGESLLLHR--------KTRVLSFTKK 111
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
LT SDTST GGFSVP+R AE+ PPLD QQ P+QEL+AKDLHG EWRFRHIYRGQP+RH
Sbjct: 112 LTPSDTSTQGGFSVPKRHAEESLPPLDKSQQPPAQELLAKDLHGSEWRFRHIYRGQPKRH 171
Query: 236 LLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVL 295
LLT GWS F+S K +V+GD+ +FLRG+ GELR+G+RR+++ N L ++++ + +L
Sbjct: 172 LLTGGWSTFISSKRVVAGDSFIFLRGESGELRVGVRRAMKLENNLSANVVTAHSMQLGIL 231
Query: 296 SVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERR 355
S ++A+ST S+F +F+ P + A+F+IP+ +Y+K IGTRF M+FE ++ E+R
Sbjct: 232 SSASHAISTGSIFTIFFHPWTSPAEFIIPFDQYMKSAEIEYSIGTRFIMQFEGEECTEQR 291
Query: 356 CN 357
C
Sbjct: 292 CQ 293
>gi|297832370|ref|XP_002884067.1| hypothetical protein ARALYDRAFT_319704 [Arabidopsis lyrata subsp.
lyrata]
gi|297329907|gb|EFH60326.1| hypothetical protein ARALYDRAFT_319704 [Arabidopsis lyrata subsp.
lyrata]
Length = 597
Score = 292 bits (748), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 144/352 (40%), Positives = 211/352 (59%), Gaps = 31/352 (8%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEV-PNFDLQPQIFCKVV 115
+Y +LW CAGPL +PK G V YFPQGH+E + + + ++ P FDL ++ C+V+
Sbjct: 25 MYEQLWKLCAGPLCDIPKIGEKVYYFPQGHIELIEAYTREELNKIQPIFDLPSKLQCRVI 84
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHM---- 171
+QL K +DE Y ++ L+P ++ PT++ H
Sbjct: 85 AIQLKVEKNSDETYAEITLMPDTQV---------------------VIPTQNDNHYRPLV 123
Query: 172 --FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
F K LTASDTS HGGFSVPR+ A +C PPLD Q P+QEL+ DLHG +WRF+H YR
Sbjct: 124 NSFTKVLTASDTSVHGGFSVPRKLAIECLPPLDMSQPLPAQELLTIDLHGNQWRFKHSYR 183
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQN 289
G PRRHLLT+GW+ F + K LV+GD ++FLRG+ GELR+GIRR+ + + S++S +
Sbjct: 184 GTPRRHLLTSGWNAFTTSKKLVAGDVIVFLRGETGELRVGIRRAGHQQKNIHSSLISIDS 243
Query: 290 SYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMD 349
V++ +A + + MF V Y PR++ F++ Y K+V + N +G+RF MRFE +
Sbjct: 244 MRHGVIASAVHAFNNQCMFIVVYKPRSSQ--FIVSYNKFVDAVNNKFNVGSRFTMRFEGE 301
Query: 350 DSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
D ERR +G + G+ + + W S+WR L V+WDE ++VSPW+I+
Sbjct: 302 DFSERRYSGTIIGVNNFSSH-WMESEWRSLEVKWDEFASFPRPDKVSPWDIE 352
Score = 93.2 bits (230), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 64/100 (64%), Gaps = 1/100 (1%)
Query: 660 FGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGL 719
G ++TS S Q RSCTKV QG VGRA+DL LNGY+ L+ ELE LF++ G
Sbjct: 497 LGQTITSPREIQSKQFSSTRSCTKVQMQGVPVGRALDLNVLNGYDHLIIELEKLFDLNGQ 556
Query: 720 LRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIY 759
L+ + W+I + D+E + +VGD+PW EFC+ V KI IY
Sbjct: 557 LQTRNQ-WKIAFKDNEGNEKLVGDNPWPEFCSMVKKIFIY 595
>gi|70663942|emb|CAE03604.2| OSJNBb0004A17.6 [Oryza sativa Japonica Group]
Length = 831
Score = 291 bits (744), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 158/358 (44%), Positives = 214/358 (59%), Gaps = 51/358 (14%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIE--VPNF-DLQPQIFCKVVD 116
ELWHACAGPL LP G VVYFPQGH EQVA+S+ +E +PN+ +L Q+ C++ D
Sbjct: 31 ELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTN-KEVEGHIPNYPNLPAQLICQLHD 89
Query: 117 VQLLANKENDEVYTQVALLPQPELEGLN-LEAKQLEDLGVDEEGGGRSP------TKSTP 169
V + A+ E DEVY Q+ L P + L L ++ + E+ P +K
Sbjct: 90 VTMHADVETDEVYAQMTLQPLNPVRRLGFLHDVCSAEVLMQEQNDAYLPAEMGIMSKQPT 149
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
+ FCKTLTASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+A+D+H +EW+FRHI+R
Sbjct: 150 NYFCKTLTASDTSTHGGFSVPRRAAERVFPPLDFTQQPPAQELIARDIHDIEWKFRHIFR 209
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQN 289
GQP+RHLLTTGWS+FVS K LV+GD+VLF+ + +L LGIRR+ +P+ +P S+LS +
Sbjct: 210 GQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDS 269
Query: 290 SYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMD 349
+ +L+ A+A +T S F +FY+PR
Sbjct: 270 MHIGLLAAAAHAAATNSRFTIFYNPRYM-------------------------------- 297
Query: 350 DSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
G +T ++D DP RWP+S WR + V WDE + +VS WEI+ + P
Sbjct: 298 --------GTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFP 347
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 54/77 (70%), Gaps = 3/77 (3%)
Query: 676 PGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDS 734
P R+ KV+K GS VGR++D+ R + Y +L EL +F ++G L DP + GW++++ D
Sbjct: 692 PATRTFVKVYKSGS-VGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDR 750
Query: 735 ENDVMVVGDDPWHEFCN 751
ENDV+++GDDPW EF N
Sbjct: 751 ENDVLLLGDDPW-EFIN 766
>gi|356570939|ref|XP_003553640.1| PREDICTED: auxin response factor 2-like [Glycine max]
Length = 630
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 221/735 (30%), Positives = 339/735 (46%), Gaps = 154/735 (20%)
Query: 49 SSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPP---IEVPNFD 105
S + S+Y ELW ACAG +P++ V+YFPQGHLEQVA+ + +E+P +D
Sbjct: 13 SKKGVKDSLYTELWRACAGSFVYVPREEETVLYFPQGHLEQVAAYTQHQQDGHMEIPVYD 72
Query: 106 LQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPT 165
L +I CK++ ++L A +DEVY QV L+P + + L LE ++ + + P+
Sbjct: 73 LPSKILCKIMHIELKAEAFSDEVYAQVTLVPALKQDNLRLEVEENDQI----------PS 122
Query: 166 KSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFR 225
+T + F K LT SDTSTHGGFSVP++ A++CFPPLD QQ P+QE+VAKDL+G E
Sbjct: 123 ITTTYTFSKILTPSDTSTHGGFSVPKKHADECFPPLDMTQQTPAQEIVAKDLNGAE---- 178
Query: 226 HIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPD--S 283
GE+R+GIRR+ + + + S
Sbjct: 179 -------------------------------------SGEIRVGIRRATEHLSNVSQSSS 201
Query: 284 ILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFK 343
++S + +L+ ++AVS+ +MF V+Y P +F++P + Y+K + IG R +
Sbjct: 202 LISGHSMQLGILASASHAVSSGTMFIVYYHPWTNPFEFIVPLRTYLKSTVPDYPIGMRVQ 261
Query: 344 MRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSD-HQEQVSPWEIDR 402
M+ E+++S RR G + G D+D RWP S+WRCL V+WD + + E+V PW I+
Sbjct: 262 MQHEVEES-LRRHAGTIIGHEDIDKIRWPGSEWRCLKVQWDAVLDDKMNPERVCPWWIE- 319
Query: 403 SVSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARG-GGVLDF------------EESVRS 449
PL S + KK L ++ R G+ F ++ R
Sbjct: 320 -----PL---ESAKEKKQVPALPTTKKALALNQRSLPGISSFGMHDGQNSAGPSSQTRRE 371
Query: 450 SKVLQGQENVGFVSPLYGCDTVNHPLGFEMRAPAHQSLALNGIRKDNINELVRALPTSYT 509
+ LQGQ+ G S PL RAP D I+ + S
Sbjct: 372 DRDLQGQDYSGIHSA--------QPL---QRAPP----------TDVIHPSKVPIRGSRF 410
Query: 510 GFVESNRFPKVLQGQEICPL-RSLTGKVDLNLGTWGKPNFGCNSMNMYQASKPNIYPPPS 568
G N+ P +QG PL +SL+ + L + S N+ ++ P +
Sbjct: 411 GKENPNQLPFPMQG----PLHKSLSRSMSLT-----HEDLSITSSNLSSIGSESLGWPST 461
Query: 569 ESLSNMFFPYGDMPKTVQHHTMPPYASNLQRENVKLNSSSIQMPAI-GAEIRKANLLNEH 627
ES + P+G P S + V L S ++P++ A K + L +
Sbjct: 462 ESRNENDVPFGQ----------PGSCSTFKLFGVSLIDRSSELPSLQSAAFNKTSSLLSN 511
Query: 628 KPVENIPTPTFKANMRSHKDGSFNGTAAGCKLFGFSLTSETPTPSSQSPGKRSCTKVHKQ 687
P+ P T K R + RSCTKV K
Sbjct: 512 PPMRVAPGKTCKKCHRVN--------------------------------NRSCTKVLKL 539
Query: 688 GSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGDDPWH 747
G+ +GRA+DL R +GY +L++EL+ +F G L + + GW + D + D+M +GD PW
Sbjct: 540 GTALGRAVDLARFHGYTELIAELDSMFEFRGSLINESSGWHVTCMDDDGDMMQLGDYPWQ 599
Query: 748 EFCNEVSKIHIYTQE 762
+F V K+ I +E
Sbjct: 600 DFQGVVQKMIICPKE 614
>gi|242074738|ref|XP_002447305.1| hypothetical protein SORBIDRAFT_06g032500 [Sorghum bicolor]
gi|241938488|gb|EES11633.1| hypothetical protein SORBIDRAFT_06g032500 [Sorghum bicolor]
Length = 821
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 163/357 (45%), Positives = 220/357 (61%), Gaps = 23/357 (6%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL LP G VVYFPQGH EQVA+S+ +PN+ +L PQ+ C++ DV
Sbjct: 31 ELWHACAGPLVCLPTVGTRVVYFPQGHSEQVAASTNKEVDGHIPNYPNLPPQLICQLHDV 90
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L ++ D + E G S K + FCKTLT
Sbjct: 91 TMHADVETDEVYAQMTLQP--------LNPQEQNDAYLPAEMGIMS--KQPTNYFCKTLT 140
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRG------Q 231
ASDTSTHGGFSVPRRAAE FPPL + LHG+ + G Q
Sbjct: 141 ASDTSTHGGFSVPRRAAERVFPPLVISHSSLQHRSL---LHGI-FMMSSGNSGISSEASQ 196
Query: 232 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSY 291
P+RHLLTTGWS+FVS K LV+GD+VLF+ + +L LGIRR+ +P+ +P S+LS + +
Sbjct: 197 PKRHLLTTGWSVFVSAKRLVAGDSVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMH 256
Query: 292 PNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDD 350
+L+ A+A +T S F +FY+PRA+ ++FVIP KY+K + + I +G RF+M FE ++
Sbjct: 257 IGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEE 316
Query: 351 SPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
S RR G +T ++D DP RWP+S WR + V WDE + +VS WEI+ + P
Sbjct: 317 SSVRRYMGTITEVSDADPVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFP 373
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Query: 676 PGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDS 734
P R+ KV+K GS VGR++D+ R + Y +L EL +F ++G L DP + GW++++ D
Sbjct: 719 PAARTFVKVYKSGS-VGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDR 777
Query: 735 ENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
ENDV+++GDDPW F N V I I + E+V KM
Sbjct: 778 ENDVLLLGDDPWESFVNSVWYIKILSPEDVHKM 810
>gi|297851862|ref|XP_002893812.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339654|gb|EFH70071.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 625
Score = 290 bits (742), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 148/366 (40%), Positives = 215/366 (58%), Gaps = 20/366 (5%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEV-PNFDLQPQIFCKVV 115
+Y +LW CAGPL LPK G + YFPQGH+E + +S+ ++ P+FDL ++ C V
Sbjct: 24 MYEQLWKICAGPLCDLPKPGETIYYFPQGHIELIEASTKDELDQIRPHFDLPSKLRCCVD 83
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKT 175
D+QL ++ D+VY ++ L+P + V + + F K
Sbjct: 84 DIQLKIDQNTDDVYAEIYLMP--------------DTTDVITPITTMDNQRPMVYSFSKI 129
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
LT+SD +THGG S+ +R A +C PPLD Q+ P Q LVAKDLHG EW F+H +RG PRRH
Sbjct: 130 LTSSDANTHGGLSILKRHATECLPPLDMSQRTPMQHLVAKDLHGREWTFKHSFRGTPRRH 189
Query: 236 LLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVL 295
L T+GWS+F + K L+ GDA +FLRG++GEL +GIRR+ P ++S Q V+
Sbjct: 190 LFTSGWSLFATTKRLIVGDAFVFLRGENGELGVGIRRARHQLGHKPSLVISTQCMKDGVI 249
Query: 296 SVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERR 355
+ V NA +K F V Y P ++ FV+ Y K+V + N +G+RF+MRFE D E+R
Sbjct: 250 ASVVNAFKSKCKFIVVYKPSSSQ--FVVNYDKFVDAMNNKFIVGSRFRMRFEGQDFSEKR 307
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSP 415
+G + G+ D+ P+ W +S+WR L V+WDE ++VSPWEI+ + P SI
Sbjct: 308 YSGTIIGVNDMSPH-WKDSEWRSLQVQWDELSPFPRPDKVSPWEIEHLI--PSSSISQPT 364
Query: 416 RMKKLR 421
++K R
Sbjct: 365 VLQKKR 370
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 67/106 (63%), Gaps = 1/106 (0%)
Query: 662 FSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLR 721
+ TS SS+ R KV QG ++GRA+DL +GYN L+ +LE LF+++ LR
Sbjct: 495 LTWTSPKEVQSSKFNSTRRRIKVQMQGVVIGRAVDLTVFHGYNQLIQKLEELFDLKDELR 554
Query: 722 DPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
+ W I++ ++E +VM +GDDPW EFCN KI I ++EE+EKM
Sbjct: 555 SRNQ-WEIVFINNEGNVMPLGDDPWPEFCNMAKKIFIGSKEEIEKM 599
>gi|224062027|ref|XP_002300718.1| predicted protein [Populus trichocarpa]
gi|222842444|gb|EEE79991.1| predicted protein [Populus trichocarpa]
Length = 316
Score = 289 bits (739), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 154/319 (48%), Positives = 207/319 (64%), Gaps = 18/319 (5%)
Query: 51 SSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPI-EVPNF-DLQP 108
S +I ELW+ACAGPL SLP+ G++V YFPQGH EQVA S+ ++PN+ +L
Sbjct: 11 SGTRKAINSELWYACAGPLVSLPQVGSLVYYFPQGHSEQVAVSTKRSATSQIPNYPNLPS 70
Query: 109 QIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQ--LEDLGVDEEGGGRSPTK 166
Q+ C+V +V L A+K+ DE++ Q++L P +N E + D G+ P+K
Sbjct: 71 QLLCQVHNVTLHADKDTDEIHAQMSLQP------VNSEKDVFPVPDFGLK-------PSK 117
Query: 167 STPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRH 226
FCK LTASDTSTHGGFSVPRRAAE FPPLDY Q PSQELV +DLH W FRH
Sbjct: 118 HPSEFFCKALTASDTSTHGGFSVPRRAAEKLFPPLDYSMQPPSQELVVRDLHDNTWTFRH 177
Query: 227 IYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILS 286
IYRGQP+RHLLTTGWS+FV K L +GD+VLF+R + L +G+R + + + LP S+LS
Sbjct: 178 IYRGQPKRHLLTTGWSLFVGSKRLKAGDSVLFIRNEKSHLMVGVRHANRQQTTLPSSVLS 237
Query: 287 KQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIM-NPICIGTRFKMR 345
+ + VL+ A+A +S F +FY+PRA +DFVIP K+ K + + +G RF M
Sbjct: 238 ADSMHIGVLAAAAHAAGNRSPFTIFYNPRACPSDFVIPLIKFRKTVFGTQVSVGMRFGMM 297
Query: 346 FEMDDSPERRCNGVVTGIT 364
FE ++S +RR G + GI+
Sbjct: 298 FETEESGKRRYMGTIVGIS 316
>gi|449446636|ref|XP_004141077.1| PREDICTED: auxin response factor 19-like [Cucumis sativus]
Length = 1092
Score = 288 bits (738), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 161/351 (45%), Positives = 222/351 (63%), Gaps = 16/351 (4%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNF-DLQPQIFCKV 114
+I ELWHACAGPL SLP G++VVYFPQGH EQVA+S +PN+ +L ++ C +
Sbjct: 19 NINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMNKETDFIPNYPNLPSKLICML 78
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
+V L A+ E DEVY Q+ L P + E EA D+G+ + R P + FCK
Sbjct: 79 HNVTLHADPETDEVYAQMTLQPVNKYEK---EALLASDIGLKQS---RQPAE----FFCK 128
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLTASDTSTHGGFSVPRRAAE FPPL+ L++ +H I+ GQP+R
Sbjct: 129 TLTASDTSTHGGFSVPRRAAEKIFPPLNMNMN--VVILISLQIHK---NVHCIFSGQPKR 183
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS+FVS K L +GD+VLF+R + +L LGIRR+ + + L S++S + + +
Sbjct: 184 HLLTTGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISSDSMHIGI 243
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
L+ A+A + S F +FY+PRA+ ++FVIP KY K + + +G RF+M FE ++S R
Sbjct: 244 LASAAHAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVR 303
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS 405
R G +TGI+D+D RW NS+WR L V WDE + +VS WE++ V+
Sbjct: 304 RYMGTITGISDMDSVRWKNSQWRNLQVGWDESAAGERPNRVSIWEVEPVVT 354
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 64/92 (69%), Gaps = 2/92 (2%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSEND 737
R+ TKV K+GS VGR ID+ R GY++L +L +F +EG L DP + W+++Y D END
Sbjct: 965 RTYTKVQKRGS-VGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDHEND 1023
Query: 738 VMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
+++VGDDPW EF + V I I + EV++M++
Sbjct: 1024 ILLVGDDPWDEFVSCVQSIKILSSAEVQQMSL 1055
>gi|42562516|ref|NP_174691.2| auxin response factor 12 [Arabidopsis thaliana]
gi|46576671|sp|Q9XID4.2|ARFL_ARATH RecName: Full=Auxin response factor 12
gi|49616359|gb|AAT67076.1| ARF12 [Arabidopsis thaliana]
gi|225898000|dbj|BAH30332.1| hypothetical protein [Arabidopsis thaliana]
gi|332193574|gb|AEE31695.1| auxin response factor 12 [Arabidopsis thaliana]
Length = 593
Score = 288 bits (737), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 151/368 (41%), Positives = 217/368 (58%), Gaps = 20/368 (5%)
Query: 55 SSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEV-PNFDLQPQIFCK 113
S +Y +LW CAGPL +PK G V YFPQGH+E V +S+ E+ P DL ++ C+
Sbjct: 22 SYVYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVETSTREELNELQPICDLPSKLQCR 81
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFC 173
V+ + L +DE Y ++ L+P + Q+ + E R S F
Sbjct: 82 VIAIHLKVENNSDETYAEITLMP---------DTTQVV-IPTQNENQFRPLVNS----FT 127
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
K LTASDTS HGGF VP++ A +C P LD Q P+QEL+A DLHG +WRF H YRG P+
Sbjct: 128 KVLTASDTSAHGGFFVPKKHAIECLPSLDMSQPLPAQELLAIDLHGNQWRFNHNYRGTPQ 187
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
RHLLTTGW+ F + K LV+GD ++F+RG+ GELR+GIRR+ + +P SI+S
Sbjct: 188 RHLLTTGWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHG 247
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
V++ +A + MF V Y PR+ + F++ Y K++ + N +G+RF MR E DD E
Sbjct: 248 VVASAKHAFDNQCMFTVVYKPRS--SKFIVSYDKFLDAVNNKFNVGSRFTMRLEGDDFSE 305
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS 413
RRC G + G++D P+ W S+WR L V+WDE ++VSPW+I+ +P +++
Sbjct: 306 RRCFGTIIGVSDFSPH-WKCSEWRSLEVQWDEFTSFPGPKKVSPWDIEH--LMPAINVPR 362
Query: 414 SPRMKKLR 421
S +K R
Sbjct: 363 SFLLKNKR 370
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 68/103 (66%), Gaps = 3/103 (2%)
Query: 658 KLFGFSLTSETPTP--SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFN 715
K FG S T +PT + Q R+CTKV QG +GRA+DL LNGY+ L+ ELE LF+
Sbjct: 488 KKFGLSQTLRSPTEIQNKQFSSSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFD 547
Query: 716 MEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHI 758
++G L+ + W I +TDS+ D M+VGDDPW EFCN V KI I
Sbjct: 548 IKGQLQTRNQ-WEIAFTDSDEDKMLVGDDPWPEFCNMVKKIFI 589
>gi|12322942|gb|AAG51458.1|AC069160_4 hypothetical protein [Arabidopsis thaliana]
Length = 615
Score = 288 bits (737), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 153/372 (41%), Positives = 219/372 (58%), Gaps = 18/372 (4%)
Query: 55 SSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEV-PNFDLQPQIFCK 113
S +Y +LW CAGPL +PK G V YFPQG++E V +S+ E+ P DL ++ C+
Sbjct: 22 SYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVDASTREELNELQPICDLPSKLQCR 81
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFC 173
V+ + L +DE Y ++ L+P + Q+ + E R S F
Sbjct: 82 VIAIHLKVENNSDETYAEITLMP---------DTTQVV-IPTQSENQFRPLVNS----FT 127
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
K LTASDTS +GGF VP++ A +C PPLD Q P+QEL+AKDLHG +WRFRH YRG P+
Sbjct: 128 KVLTASDTSAYGGFFVPKKHAIECLPPLDMSQPLPAQELLAKDLHGNQWRFRHSYRGTPQ 187
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
RH LTTGW+ F + K LV GD ++F+RG+ GELR+GIRR+ + +P SI+S
Sbjct: 188 RHSLTTGWNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHG 247
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
V++ +A+ + +F V Y PR++ F++ Y K++ + N +G+RF MRFE DD E
Sbjct: 248 VIASAKHALDNQCIFIVVYKPRSSQ--FIVSYDKFLDAMNNKFIVGSRFTMRFEGDDFSE 305
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS 413
RR G + G+ D P+ W S+WR L V+WDE +VSPWEI+ +S + S
Sbjct: 306 RRYFGTIIGVNDFSPH-WKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLMSALNVPRSS 364
Query: 414 SPRMKKLRTGLQ 425
+ K+LR L+
Sbjct: 365 LLKNKRLRETLE 376
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 73/110 (66%), Gaps = 3/110 (2%)
Query: 658 KLFGFSLTSETPTP--SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFN 715
K FG S T +P S Q R+CTKV QG +GRA+DL LNGY+ L+ ELE LF+
Sbjct: 497 KKFGQSQTLRSPIEIQSKQFGSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFD 556
Query: 716 MEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVE 765
++G L+ + W+I +TDS+ M+VGDDPW EFC V KI IY++EEV+
Sbjct: 557 LKGQLQTRNQ-WKIAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVK 605
>gi|12323856|gb|AAG51897.1|AC023913_5 auxin response factor, putative; 32824-28369 [Arabidopsis thaliana]
Length = 620
Score = 286 bits (733), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 154/380 (40%), Positives = 220/380 (57%), Gaps = 22/380 (5%)
Query: 43 CSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEV- 101
CSA S S + Y +LW CAGPL +PK G V YFPQG++E V +S+ E+
Sbjct: 26 CSAVDGSKSYM----YEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVQASTREELNELQ 81
Query: 102 PNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGG 161
P DL ++ C+V+ + L +DE+Y ++ L+P + Q+ + E
Sbjct: 82 PICDLPSKLQCRVIAIHLKVENNSDEIYAEITLMP---------DTTQVV-IPTQSENRF 131
Query: 162 RSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVE 221
R S F K LTASDTS +GGFSVP++ A +C PPLD Q P+QE++A DLH +
Sbjct: 132 RPLVNS----FTKVLTASDTSAYGGFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQ 187
Query: 222 WRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLP 281
WRFRH YRG P+RH LTTGW+ F++ K LV GD ++F+RG+ GELR+GIRR+ + +P
Sbjct: 188 WRFRHNYRGTPQRHSLTTGWNEFITSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIP 247
Query: 282 DSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTR 341
SI+S V++ +A + +F V Y P + F++ Y K++ + N +G+R
Sbjct: 248 SSIVSIDCMRHGVIASAKHAFDNQCIFIVVYKPSIRSSQFIVSYDKFLDAVNNKFNVGSR 307
Query: 342 FKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
F MRFE DD ERR G + G++D P+ W S+WR L V+WDE +VSPWEI+
Sbjct: 308 FTMRFEGDDFSERRYFGTIIGVSDFSPH-WKCSEWRSLEVQWDEFASFSRPNKVSPWEIE 366
Query: 402 RSVSLPPLSIQSSPRMKKLR 421
V P L++ S +K R
Sbjct: 367 HLV--PALNVPRSSLLKNKR 384
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 73/110 (66%), Gaps = 3/110 (2%)
Query: 658 KLFGFSLTSETPTP--SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFN 715
K FG S T +P S Q R+CTKV QG +GRA+DL LNGY+ L+ ELE LF+
Sbjct: 502 KKFGQSQTLRSPIEIQSKQFSSSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFD 561
Query: 716 MEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVE 765
++G L+ + W+I +TDS+ M+VGDDPW EFC V KI IY++EEV+
Sbjct: 562 IKGQLQTRNQ-WKIAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVK 610
>gi|79356539|ref|NP_174679.3| auxin response factor 13 [Arabidopsis thaliana]
gi|49616361|gb|AAT67077.1| ARF13 [Arabidopsis thaliana]
gi|332193558|gb|AEE31679.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 505
Score = 286 bits (732), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 152/372 (40%), Positives = 218/372 (58%), Gaps = 23/372 (6%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEV-PNFDLQPQIFCKVV 115
+Y +LW+ CAGPL LPK G V YFPQGH+E + +S+ + P FDL ++ C+VV
Sbjct: 22 MYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIFDLPSKLRCRVV 81
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKT 175
+ +K DEVY Q++L+P E + + R P + F K
Sbjct: 82 AIDRKVDKNTDEVYAQISLMPDTT-----------EVMTHNTTMDTRRPI---VYFFSKI 127
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
LTASD S GG +P++ A +CFPPLD Q +Q LVAKDL+G EW F+H++RG P+RH
Sbjct: 128 LTASDVSLSGGLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRH 187
Query: 236 LLTT--GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
+ T+ GWS+F + K L+ GD + LRG++GELR GIRR+ + +P S++S
Sbjct: 188 MFTSGGGWSVFATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHG 247
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
V++ V NA TK MF+V Y P ++ FVI Y K+V + N +G+RF+M+FE D E
Sbjct: 248 VIASVVNAFKTKCMFNVVYKPSSSQ--FVISYDKFVDAMNNNYIVGSRFRMQFEGKDFSE 305
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS 413
+R +G + G+ D+ P+ W +S+WR L V+WDE QVSPW+I+ L P S S
Sbjct: 306 KRYDGTIIGVNDMSPH-WKDSEWRSLKVQWDELSPFLRPNQVSPWDIEH---LIPSSDIS 361
Query: 414 SPRMKKLRTGLQ 425
+KK + LQ
Sbjct: 362 QSSLKKKKHWLQ 373
>gi|222618063|gb|EEE54195.1| hypothetical protein OsJ_01030 [Oryza sativa Japonica Group]
Length = 662
Score = 286 bits (732), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 141/325 (43%), Positives = 199/325 (61%), Gaps = 14/325 (4%)
Query: 100 EVPNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEG 159
++ F + +I CKVV+V+L A E DEV+ Q+ L P P+ E L
Sbjct: 23 QIKMFQVPYKILCKVVNVELKAETETDEVFAQITLQPDPDQENLPTLPDPPL-------- 74
Query: 160 GGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHG 219
+ H FCK LT SDTSTHGGFSV RR A +C PPLD P+QEL+ KDLHG
Sbjct: 75 --PEQPRPVVHSFCKILTPSDTSTHGGFSVLRRHANECLPPLDMSMATPTQELITKDLHG 132
Query: 220 VEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNG 279
EWRF+HIYRGQPRRHLLTTGWS FV+ K L+SGDA ++LR + GE R+G+RR VQ ++
Sbjct: 133 SEWRFKHIYRGQPRRHLLTTGWSTFVTSKKLISGDAFVYLRSETGEQRVGVRRLVQKQST 192
Query: 280 LPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIG 339
+P S++S Q+ + VL+ ++A+ T S+F V+Y PR + + +++ KY+ +G
Sbjct: 193 MPASVISSQSMHLGVLASASHAIKTNSIFLVYYRPRLSQSQYIVSVNKYLAASKVGFNVG 252
Query: 340 TRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWE 399
RFKM FE +D P ++ +G + G DL +W S+W+ L V+WDE + E+VSPWE
Sbjct: 253 MRFKMSFEGEDVPVKKFSGTIVGEGDLS-LQWSGSEWKSLKVQWDEVTNVNGPERVSPWE 311
Query: 400 IDRSVSLPP---LSIQSSPRMKKLR 421
I+ P + +QS+ + K+ R
Sbjct: 312 IETCDGTAPAINVPLQSATKNKRPR 336
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 61/96 (63%), Gaps = 4/96 (4%)
Query: 672 SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILY 731
S Q+ R+ KV G+ VGRA+DL L+GY L++ELE +FN ++D + W++ +
Sbjct: 551 SHQNYTARTRIKVQMHGNAVGRAVDLANLDGYEQLMNELEEMFN----IKDLKQKWKVAF 606
Query: 732 TDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
TD E D M VGDDPW EFC V KI +Y E+ +K+
Sbjct: 607 TDDEGDTMEVGDDPWLEFCQMVRKIVLYPIEDEKKI 642
>gi|148840309|sp|Q9FX25.3|ARFM_ARATH RecName: Full=Auxin response factor 13
Length = 621
Score = 286 bits (731), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 152/372 (40%), Positives = 218/372 (58%), Gaps = 23/372 (6%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEV-PNFDLQPQIFCKVV 115
+Y +LW+ CAGPL LPK G V YFPQGH+E + +S+ + P FDL ++ C+VV
Sbjct: 22 MYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIFDLPSKLRCRVV 81
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKT 175
+ +K DEVY Q++L+P E + + R P + F K
Sbjct: 82 AIDRKVDKNTDEVYAQISLMPD-----------TTEVMTHNTTMDTRRPI---VYFFSKI 127
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
LTASD S GG +P++ A +CFPPLD Q +Q LVAKDL+G EW F+H++RG P+RH
Sbjct: 128 LTASDVSLSGGLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRH 187
Query: 236 LLTT--GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
+ T+ GWS+F + K L+ GD + LRG++GELR GIRR+ + +P S++S
Sbjct: 188 MFTSGGGWSVFATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHG 247
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
V++ V NA TK MF+V Y P ++ FVI Y K+V + N +G+RF+M+FE D E
Sbjct: 248 VIASVVNAFKTKCMFNVVYKPSSSQ--FVISYDKFVDAMNNNYIVGSRFRMQFEGKDFSE 305
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS 413
+R +G + G+ D+ P+ W +S+WR L V+WDE QVSPW+I+ L P S S
Sbjct: 306 KRYDGTIIGVNDMSPH-WKDSEWRSLKVQWDELSPFLRPNQVSPWDIEH---LIPSSDIS 361
Query: 414 SPRMKKLRTGLQ 425
+KK + LQ
Sbjct: 362 QSSLKKKKHWLQ 373
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 68/106 (64%), Gaps = 1/106 (0%)
Query: 664 LTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDP 723
L S S++ RS KVH QG + RA+DL ++GYN L+ +LE LF+++ LR
Sbjct: 493 LRSPKEVQSTEFNFTRSRIKVHMQGVAISRAVDLTAMHGYNQLIQKLEELFDLKDELRTR 552
Query: 724 AKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
+ W I++T++E M+VGDDPW EFCN +I I ++EE++KM +
Sbjct: 553 NQ-WEIVFTNNEGAEMLVGDDPWPEFCNMAKRIFICSKEEIKKMKL 597
>gi|42562523|ref|NP_174701.2| auxin response factor 21 [Arabidopsis thaliana]
gi|46576639|sp|Q9C8N9.2|ARFU_ARATH RecName: Full=Putative auxin response factor 21
gi|332193589|gb|AEE31710.1| auxin response factor 21 [Arabidopsis thaliana]
Length = 606
Score = 285 bits (729), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 151/368 (41%), Positives = 218/368 (59%), Gaps = 20/368 (5%)
Query: 55 SSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEV-PNFDLQPQIFCK 113
S +Y +LW CAGPL +PK G V YFPQG++E V +S+ E+ P DL ++ C+
Sbjct: 22 SYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVQASTREELNELQPICDLPSKLQCR 81
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFC 173
V+ + L +DE+Y ++ L+P + Q+ + E R S F
Sbjct: 82 VIAIHLKVENNSDEIYAEITLMP---------DTTQVV-IPTQSENRFRPLVNS----FT 127
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
K LTASDTS +GGFSVP++ A +C PPLD Q P+QE++A DLH +WRFRH YRG P+
Sbjct: 128 KVLTASDTSAYGGFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQ 187
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
RH LTTGW+ F++ K LV GD ++F+RG+ GELR+GIRR+ + +P SI+S
Sbjct: 188 RHSLTTGWNEFITSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHG 247
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
V++ +A + +F V Y PR++ F++ Y K++ + N +G+RF MRFE DD E
Sbjct: 248 VIASAKHAFDNQCIFIVVYKPRSSQ--FIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSE 305
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS 413
RR G + G++D P+ W S+WR L V+WDE +VSPWEI+ V P L++
Sbjct: 306 RRYFGTIIGVSDFSPH-WKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLV--PALNVPR 362
Query: 414 SPRMKKLR 421
S +K R
Sbjct: 363 SSLLKNKR 370
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 73/110 (66%), Gaps = 3/110 (2%)
Query: 658 KLFGFSLTSETPTP--SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFN 715
K FG S T +P S Q R+CTKV QG +GRA+DL LNGY+ L+ ELE LF+
Sbjct: 488 KKFGQSQTLRSPIEIQSKQFSSSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFD 547
Query: 716 MEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVE 765
++G L+ + W+I +TDS+ M+VGDDPW EFC V KI IY++EEV+
Sbjct: 548 IKGQLQTRNQ-WKIAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVK 596
>gi|379323188|gb|AFD01293.1| auxin response factor 2-1 [Brassica rapa subsp. pekinensis]
Length = 798
Score = 283 bits (723), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 165/418 (39%), Positives = 219/418 (52%), Gaps = 91/418 (21%)
Query: 55 SSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCK 113
++IY ELWHACAGPL ++P++ + V YFPQGH+EQV AS++ ++P +DL ++ C+
Sbjct: 39 AAIYRELWHACAGPLVTVPRRDDRVFYFPQGHIEQVEASTNQAAEQQMPLYDLPSKLLCR 98
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFC 173
V++V L A + DEVY Q+ LLP+P ++ V++E P + H FC
Sbjct: 99 VINVDLKAEVDTDEVYAQITLLPEP----------NQDENAVEKEAPPPPPPRFQVHSFC 148
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
KTLTASDTSTHGGFSV RR A++C PPLD +Q P+QELVAKDLH EWRFRHI+RGQPR
Sbjct: 149 KTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHSNEWRFRHIFRGQPR 208
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
RHLL +GWS+FVS K LV+GDA +FLR E + P +
Sbjct: 209 RHLLQSGWSVFVSSKRLVAGDAFIFLRTSPSEF-------IVP--------------FDQ 247
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
+ V N S F + + P Q++
Sbjct: 248 YMESVKNNYSIGMRFKMRFEGEEA------PEQRFT------------------------ 277
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS 413
G + GI D DP RW SKWR L VRWDE E+VSPW+I+ +++ P LS
Sbjct: 278 ----GTIVGIEDSDPTRWAKSKWRSLKVRWDETSSIPRPERVSPWKIEPALAPPALSPVP 333
Query: 414 SPRMKKLRTGLQAPPPD--------------YPVSARGGGVLDFEESVRSSKVLQGQE 457
R K+ R+ + PD YP+ A G S+VLQGQE
Sbjct: 334 MTRPKRPRSNMAPSSPDSSMHIKEGSSKVNVYPLPASG-----------LSRVLQGQE 380
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 64/89 (71%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDV 738
RSCTKVHKQG +GR++DL + Y +L++EL+ LF G L P K W I+YTD END+
Sbjct: 651 RSCTKVHKQGIALGRSVDLSKFQNYEELIAELDMLFEFNGELMAPKKDWLIVYTDDENDM 710
Query: 739 MVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
M+VGDDPW EFC V KI IYT+EEV M
Sbjct: 711 MLVGDDPWQEFCCMVRKIFIYTKEEVRNM 739
>gi|15219633|ref|NP_174784.1| auxin response factor 15 [Arabidopsis thaliana]
gi|332193684|gb|AEE31805.1| auxin response factor 15 [Arabidopsis thaliana]
Length = 598
Score = 282 bits (722), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 149/368 (40%), Positives = 215/368 (58%), Gaps = 15/368 (4%)
Query: 55 SSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEV-PNFDLQPQIFCK 113
S +Y +LW CAGPL +PK G V YFPQG++E V +S+ E+ P DL ++ C+
Sbjct: 22 SYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGNIELVEASTREELNELQPICDLPSKLQCR 81
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFC 173
V+ + L +DE Y ++ L+P + E+L V + + + F
Sbjct: 82 VIAIHLKVENNSDETYAKITLMPDTTVS---------ENLQVVIPTQNENQFRPLVNSFT 132
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
K LTASD S +G FSVP++ A +C PPLD Q P+QEL+A DLHG +W FRH YRG P+
Sbjct: 133 KVLTASDISANGVFSVPKKHAIECLPPLDMSQPLPAQELLAIDLHGNQWSFRHSYRGTPQ 192
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
RHLLTTGW+ F + K LV GD ++F+RG+ GELR+GIRR+ + +P SI+S
Sbjct: 193 RHLLTTGWNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHG 252
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
V++ +A + MF V Y PR++ F++ Y K++ + N +G+RF MRFE DD E
Sbjct: 253 VIASAKHAFDNQCMFIVVYKPRSSQ--FIVSYDKFLDAVNNKFNVGSRFTMRFEGDDLSE 310
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS 413
RR G + G+++ P+ W S WR L V+WDE +VSPWEI+ +P L++
Sbjct: 311 RRYFGTIIGVSNFSPH-WKCSDWRSLEVQWDEFASFLRPNKVSPWEIEH--LMPALNVPR 367
Query: 414 SPRMKKLR 421
S +K R
Sbjct: 368 SSFLKNKR 375
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 70/103 (67%), Gaps = 3/103 (2%)
Query: 658 KLFGFSLTSETPTP--SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFN 715
K FG S T +PT S Q R+CTKV QG +GRA+DL LNGY+ L+ ELE LF+
Sbjct: 493 KKFGQSQTLRSPTKIQSKQFSSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFD 552
Query: 716 MEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHI 758
++G L+ + W+I++T S+ D M+VGDDPW EFCN V +I+I
Sbjct: 553 LKGQLQTRNQ-WKIIFTGSDEDEMLVGDDPWPEFCNMVKRIYI 594
>gi|449532717|ref|XP_004173327.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 9-like,
partial [Cucumis sativus]
Length = 590
Score = 281 bits (720), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 134/267 (50%), Positives = 184/267 (68%), Gaps = 5/267 (1%)
Query: 165 TKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRF 224
T+ T FCK LTASDTSTHGGFSV R+ A +C PPLD Q P+QEL AKDLHG EW+F
Sbjct: 15 TRQTVRFFCKILTASDTSTHGGFSVLRKHAAECLPPLDMSQSTPTQELAAKDLHGYEWKF 74
Query: 225 RHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSI 284
+HI+RGQPRRHLLTTGWS FV+ K LV+GDA +FLRG +GELR+G+RR + ++ +P S+
Sbjct: 75 KHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGDNGELRVGVRRQARQQSLMPSSV 134
Query: 285 LSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKM 344
+S + + VL+ ++AV T++ F V+Y PR + F+I KY++ + N +G RFKM
Sbjct: 135 ISSHSMHLGVLATASHAVRTQTYFVVYYKPRTSQ--FIISLNKYLETVKNGYEVGMRFKM 192
Query: 345 RFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSV 404
RFE ++SPERR G + G+ D+ P +W +SKWR L ++WDE E+VSPWEI+ V
Sbjct: 193 RFEGEESPERRFTGTIVGVGDMSP-QWSDSKWRSLKIQWDEPATIQRPERVSPWEIEPFV 251
Query: 405 SLPPLSIQSSPRMKKLRTG-LQAPPPD 430
L+ + P +K R ++ PPP+
Sbjct: 252 PSASLNF-THPAIKSKRARPVEIPPPE 277
Score = 106 bits (265), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 70/105 (66%), Gaps = 1/105 (0%)
Query: 664 LTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDP 723
LT T T + R+ TKV QG VGRA+DL L GY DL+ ELE++F ++G LR
Sbjct: 465 LTKGTQTKHISNLSSRTRTKVQMQGVAVGRAVDLTTLEGYEDLIDELENVFEIKGELRGI 524
Query: 724 AKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
K W I++TD END+M+VGDDPW EFC V +I I + EEV+KM+
Sbjct: 525 NK-WSIVFTDDENDMMLVGDDPWPEFCKMVKRIFICSSEEVKKMS 568
>gi|147770403|emb|CAN69277.1| hypothetical protein VITISV_023245 [Vitis vinifera]
Length = 1183
Score = 281 bits (718), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 158/353 (44%), Positives = 208/353 (58%), Gaps = 57/353 (16%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVV 115
SI ELWHACAGPL SLP G++VVYFPQGH EQ
Sbjct: 89 SINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQ-------------------------- 122
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKT 175
A+ E DEVY Q+ L P + EA DLG+ + R P + FCKT
Sbjct: 123 -----ADAETDEVYAQMTLQP------YDKEALLASDLGLKQ---SRQPVE----FFCKT 164
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
LTASDTSTHGGFSVPRRAAE FPPLD+ Q P+QE+VA+DLH W FRHIYRGQP+RH
Sbjct: 165 LTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVARDLHDNTWTFRHIYRGQPKRH 224
Query: 236 LLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVL 295
LLTTGWS+FVS K L +GD+VLF+R + +L LGIRR+ + + L S++S + + +L
Sbjct: 225 LLTTGWSVFVSTKRLFAGDSVLFIRDEKSQLLLGIRRANRQQPALSSSVISCDSMHIGIL 284
Query: 296 SVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERR 355
+ A+A + S F +FY+PRA+ ++FVIP KY K + + +G RF+M FE ++S RR
Sbjct: 285 AAAAHAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRR 344
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVR---WDECIGSDHQEQVSPWEIDRSVS 405
G +TGI++L RC + + + +VS WEI+ V+
Sbjct: 345 YMGTITGISEL----------RCCAMEKFTMAQPSAGERPSRVSIWEIEPVVT 387
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 69/99 (69%), Gaps = 2/99 (2%)
Query: 672 SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRIL 730
++Q+ R+ TKV K+GS VGR+ID+ R GY++L +L +F +EG L DP + W+++
Sbjct: 1049 TNQAQRMRTYTKVQKRGS-VGRSIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLV 1107
Query: 731 YTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
Y D END+++VGDDPW EF + V I I + EV++M++
Sbjct: 1108 YVDHENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMSL 1146
>gi|359359022|gb|AEV40929.1| putative auxin response factor [Oryza punctata]
Length = 973
Score = 280 bits (716), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 155/347 (44%), Positives = 193/347 (55%), Gaps = 67/347 (19%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSS-AFPPIEVPNF-DLQPQIFCKV 114
I ELWHACAGPL LP++G++V YFPQGH EQVA+++ P +PN+ +L Q+ C+V
Sbjct: 36 INSELWHACAGPLVCLPQRGSLVYYFPQGHSEQVAATTRKIPNSRIPNYPNLPSQLLCQV 95
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
++ L A+K+ DEVY Q+ L P +N E D+ G + +K FCK
Sbjct: 96 HNITLHADKDTDEVYAQMTLQP------VNSET----DVFPIPTLGAYTKSKHPTEYFCK 145
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
LTASDTSTHGGFSVPRRAAE FP LDY Q P+QEL+ +DLH W FRHIYRGQP+R
Sbjct: 146 NLTASDTSTHGGFSVPRRAAEKLFPQLDYSMQPPNQELIVRDLHDNMWTFRHIYRGQPKR 205
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS+FV K L +GD+VLF IR S P
Sbjct: 206 HLLTTGWSLFVGAKRLKAGDSVLF-----------IRTSPSP------------------ 236
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
FVIP +Y K +G RF M FE ++S +R
Sbjct: 237 --------------------------FVIPVARYNKATYMQPSVGMRFAMMFETEESSKR 270
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
R G V GI+D DP RWPNSKWR L V WDE + E+VS W+I+
Sbjct: 271 RYTGTVVGISDYDPMRWPNSKWRNLQVEWDEHGYGERPERVSIWDIE 317
Score = 89.7 bits (221), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/96 (45%), Positives = 62/96 (64%), Gaps = 2/96 (2%)
Query: 676 PGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKG-WRILYTDS 734
P R+ TKV KQGS VGR+ID+ Y++L S + +F ++G L P W+++Y D
Sbjct: 794 PPVRTYTKVQKQGS-VGRSIDVTGFRNYHELRSAIACMFGLQGKLEHPGSSEWKLVYVDY 852
Query: 735 ENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIG 770
ENDV++VGDDPW EF N V I I + EV++M +G
Sbjct: 853 ENDVLLVGDDPWEEFINCVRCIRILSPSEVQQMRVG 888
>gi|8778254|gb|AAF79263.1|AC023279_12 F12K21.26 [Arabidopsis thaliana]
Length = 620
Score = 279 bits (713), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 147/373 (39%), Positives = 214/373 (57%), Gaps = 26/373 (6%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVD 116
+Y +LW CAGPL +PK G V YFPQG++E ++ ++ P DL ++ C+V+
Sbjct: 1 MYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELASTREELNELQ-PICDLPSKLQCRVIA 59
Query: 117 VQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTL 176
+ L +DE+Y ++ L+P + Q+ + E R S F K L
Sbjct: 60 IHLKVENNSDEIYAEITLMP---------DTTQVV-IPTQSENRFRPLVNS----FTKVL 105
Query: 177 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHL 236
TASDTS +GGFSVP++ A +C PPLD Q P+QE++A DLH +WRFRH YRG P+RH
Sbjct: 106 TASDTSAYGGFSVPKKHAIECLPPLDMSQPLPAQEILAIDLHDNQWRFRHNYRGTPQRHS 165
Query: 237 LTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLS 296
LTTGW+ F++ K LV GD ++F+RG+ GELR+GIRR+ + +P SI+S V++
Sbjct: 166 LTTGWNEFITSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHGVIA 225
Query: 297 VVANAVSTKSMFHVFYSPRATH--------ADFVIPYQKYVKIIMNPICIGTRFKMRFEM 348
+A + +F V Y PR + F++ Y K++ + N +G+RF MRFE
Sbjct: 226 SAKHAFDNQCIFIVVYKPRFIFCVFISIRSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEG 285
Query: 349 DDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPP 408
DD ERR G + G++D P+ W S+WR L V+WDE +VSPWEI+ V P
Sbjct: 286 DDFSERRYFGTIIGVSDFSPH-WKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLV--PA 342
Query: 409 LSIQSSPRMKKLR 421
L++ S +K R
Sbjct: 343 LNVPRSSLLKNKR 355
Score = 90.9 bits (224), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 60/83 (72%), Gaps = 1/83 (1%)
Query: 683 KVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVG 742
+V QG +GRA+DL LNGY+ L+ ELE LF+++G L+ + W+I +TDS+ M+VG
Sbjct: 529 QVQMQGVTIGRAVDLSVLNGYDQLILELEKLFDIKGQLQTRNQ-WKIAFTDSDGYEMLVG 587
Query: 743 DDPWHEFCNEVSKIHIYTQEEVE 765
DDPW EFC V KI IY++EEV+
Sbjct: 588 DDPWPEFCKMVKKILIYSKEEVK 610
>gi|8778352|gb|AAF79360.1|AC007887_19 F15O4.42 [Arabidopsis thaliana]
Length = 570
Score = 278 bits (712), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 150/368 (40%), Positives = 214/368 (58%), Gaps = 20/368 (5%)
Query: 55 SSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEV-PNFDLQPQIFCK 113
S +Y +LW CAGPL +PK G V YFPQG++E V +S+ E+ P DL ++ C+
Sbjct: 22 SYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGNIELVEASTREELNELQPICDLPSKLQCR 81
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFC 173
V+ + L +DE Y ++ L+P + Q+ + E R S F
Sbjct: 82 VIAIHLKVENNSDETYAKITLMP---------DTTQVV-IPTQNENQFRPLVNS----FT 127
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
K LTASD S +G FSVP++ A +C PPLD Q P+QEL+A DLHG +W FRH YRG P+
Sbjct: 128 KVLTASDISANGVFSVPKKHAIECLPPLDMSQPLPAQELLAIDLHGNQWSFRHSYRGTPQ 187
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
RHLLTTGW+ F + K LV GD ++F+RG+ GELR+GIRR+ + +P SI+S
Sbjct: 188 RHLLTTGWNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHG 247
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
V++ +A + MF V Y PR++ F++ Y K++ + N +G+RF MRFE DD E
Sbjct: 248 VIASAKHAFDNQCMFIVVYKPRSSQ--FIVSYDKFLDAVNNKFNVGSRFTMRFEGDDLSE 305
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS 413
RR G + G+++ P+ W S WR L V+WDE +VSPWEI+ +P L++
Sbjct: 306 RRYFGTIIGVSNFSPH-WKCSDWRSLEVQWDEFASFLRPNKVSPWEIEH--LMPALNVPR 362
Query: 414 SPRMKKLR 421
S +K R
Sbjct: 363 SSFLKNKR 370
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 61/120 (50%), Gaps = 32/120 (26%)
Query: 658 KLFGFSLTSETPTP--SSQSPGKRSCTKV-----------------------------HK 686
K FG S T +PT S Q R+CTKV
Sbjct: 451 KKFGQSQTLRSPTKIQSKQFSSTRTCTKVSIRSIYSYSLYMKLFLIILTSHNFDMEQVQM 510
Query: 687 QGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGDDPW 746
QG +GRA+DL LNGY+ L+ ELE LF+++G L+ + W+I++T S+ D M+VGDDPW
Sbjct: 511 QGVTIGRAVDLSVLNGYDQLILELEKLFDLKGQLQTRNQ-WKIIFTGSDEDEMLVGDDPW 569
>gi|46576661|sp|Q9LQE3.2|ARFO_ARATH RecName: Full=Putative auxin response factor 15
Length = 593
Score = 278 bits (711), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 150/368 (40%), Positives = 214/368 (58%), Gaps = 20/368 (5%)
Query: 55 SSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEV-PNFDLQPQIFCK 113
S +Y +LW CAGPL +PK G V YFPQG++E V +S+ E+ P DL ++ C+
Sbjct: 22 SYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGNIELVEASTREELNELQPICDLPSKLQCR 81
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFC 173
V+ + L +DE Y ++ L+P + Q+ + E R S F
Sbjct: 82 VIAIHLKVENNSDETYAKITLMP---------DTTQVV-IPTQNENQFRPLVNS----FT 127
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
K LTASD S +G FSVP++ A +C PPLD Q P+QEL+A DLHG +W FRH YRG P+
Sbjct: 128 KVLTASDISANGVFSVPKKHAIECLPPLDMSQPLPAQELLAIDLHGNQWSFRHSYRGTPQ 187
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
RHLLTTGW+ F + K LV GD ++F+RG+ GELR+GIRR+ + +P SI+S
Sbjct: 188 RHLLTTGWNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHG 247
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
V++ +A + MF V Y PR++ F++ Y K++ + N +G+RF MRFE DD E
Sbjct: 248 VIASAKHAFDNQCMFIVVYKPRSSQ--FIVSYDKFLDAVNNKFNVGSRFTMRFEGDDLSE 305
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS 413
RR G + G+++ P+ W S WR L V+WDE +VSPWEI+ +P L++
Sbjct: 306 RRYFGTIIGVSNFSPH-WKCSDWRSLEVQWDEFASFLRPNKVSPWEIEH--LMPALNVPR 362
Query: 414 SPRMKKLR 421
S +K R
Sbjct: 363 SSFLKNKR 370
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 70/103 (67%), Gaps = 3/103 (2%)
Query: 658 KLFGFSLTSETPTP--SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFN 715
K FG S T +PT S Q R+CTKV QG +GRA+DL LNGY+ L+ ELE LF+
Sbjct: 488 KKFGQSQTLRSPTKIQSKQFSSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFD 547
Query: 716 MEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHI 758
++G L+ + W+I++T S+ D M+VGDDPW EFCN V +I+I
Sbjct: 548 LKGQLQTRNQ-WKIIFTGSDEDEMLVGDDPWPEFCNMVKRIYI 589
>gi|79357149|ref|NP_174758.2| auxin response factor 20 [Arabidopsis thaliana]
gi|206729928|sp|Q9C7I9.3|ARFT_ARATH RecName: Full=Auxin response factor 20
gi|49616365|gb|AAT67079.1| ARF20 [Arabidopsis thaliana]
gi|332193650|gb|AEE31771.1| auxin response factor 20 [Arabidopsis thaliana]
Length = 590
Score = 278 bits (711), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 149/368 (40%), Positives = 213/368 (57%), Gaps = 20/368 (5%)
Query: 55 SSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEV-PNFDLQPQIFCK 113
S +Y +LW CAGPL +PK G V YFPQG++E V +S+ E+ P DL ++ C+
Sbjct: 22 SYMYEQLWKLCAGPLCDIPKLGENVYYFPQGNIELVDASTREELNELQPICDLPSKLQCR 81
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFC 173
V+ + L +DE Y ++ L+P + Q+ + E R S F
Sbjct: 82 VIAIHLKVENNSDETYAEITLMP---------DTTQVV-IPTQSENQFRPLVNS----FT 127
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
K LTASDTS +GGF VP++ A +C PPL P+QEL+AKDLHG +WRFRH YRG P+
Sbjct: 128 KVLTASDTSAYGGFFVPKKHAIECLPPLPL----PAQELLAKDLHGNQWRFRHSYRGTPQ 183
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
RH LTTGW+ F + K LV GD ++F+RG+ GELR+GIRR+ + +P SI+S
Sbjct: 184 RHSLTTGWNEFTTSKKLVKGDVIVFVRGETGELRVGIRRARHQQGNIPSSIVSIDCMRHG 243
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
V++ +A+ + +F V Y P + F++ Y K++ + N +G+RF MRFE DD E
Sbjct: 244 VIASAKHALDNQCIFIVVYKPSIRSSQFIVSYDKFLDAMNNKFIVGSRFTMRFEGDDFSE 303
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS 413
RR G + G+ D P+ W S+WR L V+WDE +VSPWEI+ +S + S
Sbjct: 304 RRYFGTIIGVNDFSPH-WKCSEWRSLEVQWDEFASFSRPNKVSPWEIEHLMSALNVPRSS 362
Query: 414 SPRMKKLR 421
+ K+LR
Sbjct: 363 LLKNKRLR 370
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 73/110 (66%), Gaps = 3/110 (2%)
Query: 658 KLFGFSLTSETPTP--SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFN 715
K FG S T +P S Q R+CTKV QG +GRA+DL LNGY+ L+ ELE LF+
Sbjct: 472 KKFGQSQTLRSPIEIQSKQFGSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFD 531
Query: 716 MEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVE 765
++G L+ + W+I +TDS+ M+VGDDPW EFC V KI IY++EEV+
Sbjct: 532 LKGQLQTRNQ-WKIAFTDSDGYEMLVGDDPWPEFCKMVKKILIYSKEEVK 580
>gi|297851948|ref|XP_002893855.1| hypothetical protein ARALYDRAFT_473654 [Arabidopsis lyrata subsp.
lyrata]
gi|297339697|gb|EFH70114.1| hypothetical protein ARALYDRAFT_473654 [Arabidopsis lyrata subsp.
lyrata]
Length = 601
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 150/348 (43%), Positives = 209/348 (60%), Gaps = 21/348 (6%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEV-PNFDLQPQIFCKVV 115
+Y +LW CAGPL +PK G V YFPQGH+E V +S+ E+ P DL ++ C+V+
Sbjct: 25 MYEQLWKLCAGPLCDIPKIGEKVYYFPQGHIELVEASTGEKLNELQPIVDLPSKLQCRVI 84
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKT 175
+QL + +DE Y ++ L+P Q+ + E R S F K
Sbjct: 85 TIQLKVERNSDETYAEITLMPY---------TTQVV-IPTQNENQFRPLVNS----FTKV 130
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
LTASDTS HGGFSVPR+ A +C PPLD Q P+QEL+ DLHG +WRF+H YRG PRRH
Sbjct: 131 LTASDTSAHGGFSVPRKLAIECLPPLDMSQPLPAQELLTIDLHGNQWRFKHSYRGTPRRH 190
Query: 236 LLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVL 295
LLTTGW+ F++ K LV+GD ++FLRG+ GELR+GIRR+ + +P SI+S ++ V+
Sbjct: 191 LLTTGWNAFITSKKLVAGDVIVFLRGETGELRVGIRRAGYQQGNIPSSIISIESMRHGVI 250
Query: 296 SVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERR 355
+ +A + MF V Y PR++ F++ Y K++ + N +G+RF RFE DD ERR
Sbjct: 251 ASAKHAFDNQCMFIVVYKPRSSQ--FIVNYDKFLDAMNNKFNVGSRFTKRFEEDDFSERR 308
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRS 403
G + G+ D P+ W S+WR L DE ++VSPWEI+ S
Sbjct: 309 YFGTIIGVIDFSPH-WKCSEWRSLK---DEFASFPRPDKVSPWEIEYS 352
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 70/109 (64%), Gaps = 2/109 (1%)
Query: 658 KLFGF-SLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNM 716
K FG + S S Q R+CTKV G +GRA+DL LNGY+ L+ ELE LF++
Sbjct: 492 KKFGLGQMRSPREIQSKQLSSTRTCTKVQMHGVALGRALDLSVLNGYDQLILELEKLFDL 551
Query: 717 EGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVE 765
+G L++ + W I + D+E D M+VGDDPW EFCN V KI IY+ EEV+
Sbjct: 552 KGQLQNRNQ-WEIAFKDNEEDEMLVGDDPWPEFCNMVKKIIIYSNEEVK 599
>gi|379323208|gb|AFD01303.1| auxin response factor 7-1 [Brassica rapa subsp. pekinensis]
Length = 1474
Score = 276 bits (705), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 144/297 (48%), Positives = 193/297 (64%), Gaps = 10/297 (3%)
Query: 105 DLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSP 164
+L ++ C + +V L A+ E +EVY Q+ L P + + +A D+G+ R P
Sbjct: 353 NLPSKLICMLQNVTLNADPETEEVYAQMTLQP---VNKYDRDALLASDMGLKIN---RQP 406
Query: 165 TKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRF 224
+ FCKTLTASDTSTHGGFSVPRRAAE FP LD+ Q P QELVAKD+H W F
Sbjct: 407 NE----FFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTF 462
Query: 225 RHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSI 284
RHI+RGQP+RHLLTTGWS+FVS K L +GD+VLF+R G+L LGIRR+ + + L S+
Sbjct: 463 RHIFRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFVRDGKGQLLLGIRRANRQQPALSSSV 522
Query: 285 LSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKM 344
+S + + VL+ A+A + S F +FY+PRA A+FV+P KY K + + +G RF+M
Sbjct: 523 ISSDSMHIGVLAAAAHANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMYAQVSLGMRFRM 582
Query: 345 RFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
FE ++ RR G VTGI+DLDP RW NS+WR L + WDE D +VS W+I+
Sbjct: 583 IFETEECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIE 639
Score = 167 bits (423), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 116/174 (66%)
Query: 228 YRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSK 287
+ GQP+RHLLTTGWS+FVS K L +GD+VLF+R G+L LGIRR+ + + L S++S
Sbjct: 114 FLGQPKRHLLTTGWSVFVSTKRLFAGDSVLFVRDGKGQLLLGIRRANRQQPALSSSVISS 173
Query: 288 QNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFE 347
+ + VL+ A+A + S F +FY+PRA A+FV+P KY K + + +G RF+M FE
Sbjct: 174 DSMHIGVLAAAAHANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFE 233
Query: 348 MDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
++ RR G VTGI+DLDP RW NS+WR L + WDE D +VS W+I+
Sbjct: 234 TEECGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIE 287
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 67/98 (68%), Gaps = 2/98 (2%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDP-AKGWRILY 731
+Q+ R+ TKV K+GS VGR+ID+ R GY++L +L +F +EG L DP W+++Y
Sbjct: 1341 TQTQRMRTYTKVQKRGS-VGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPLTSDWKLVY 1399
Query: 732 TDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
D END+++VGDDPW EF N V I I + EV++M++
Sbjct: 1400 VDHENDILLVGDDPWEEFVNCVQSIKILSSAEVQQMSL 1437
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 61/91 (67%), Gaps = 1/91 (1%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNF-DLQPQIFCKV 114
+I ELWHACAGPL SLP G++VVYFPQGH EQVA+S +P++ +L ++ C +
Sbjct: 20 NINSELWHACAGPLISLPPAGSLVVYFPQGHSEQVAASMQKQTDFIPSYPNLPSKLICML 79
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNL 145
+V L A+ E +EVY Q+ L P ++ L+L
Sbjct: 80 QNVTLNADPETEEVYAQMTLQPVNKVRYLSL 110
>gi|5091627|gb|AAD39615.1|AC007454_14 Similar to gb|AF082176 auxin response factor 9 from Arabidopsis
thaliana [Arabidopsis thaliana]
Length = 619
Score = 275 bits (702), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 151/394 (38%), Positives = 217/394 (55%), Gaps = 46/394 (11%)
Query: 55 SSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQ------------------------- 89
S +Y +LW CAGPL +PK G V YFPQGH+E
Sbjct: 22 SYVYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVSSLSLSLPLFSFSLHLFSLSLLSL 81
Query: 90 -VASSSAFPPIEV-PNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEA 147
V +S+ E+ P DL ++ C+V+ + L +DE Y ++ L+P +
Sbjct: 82 SVETSTREELNELQPICDLPSKLQCRVIAIHLKVENNSDETYAEITLMP---------DT 132
Query: 148 KQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQR 207
Q+ + E R S F K LTASDTS HGGF VP++ A +C P LD Q
Sbjct: 133 TQVV-IPTQNENQFRPLVNS----FTKVLTASDTSAHGGFFVPKKHAIECLPSLDMSQPL 187
Query: 208 PSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELR 267
P+QEL+A DLHG +WRF H YRG P+RHLLTTGW+ F + K LV+GD ++F+RG+ GELR
Sbjct: 188 PAQELLAIDLHGNQWRFNHNYRGTPQRHLLTTGWNAFTTSKKLVAGDVIVFVRGETGELR 247
Query: 268 LGIRRSVQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQK 327
+GIRR+ + +P SI+S V++ +A + MF V Y PR+ + F++ Y K
Sbjct: 248 VGIRRARHQQGNIPSSIVSIDCMRHGVVASAKHAFDNQCMFTVVYKPRS--SKFIVSYDK 305
Query: 328 YVKIIMNPICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECI 387
++ + N +G+RF MR E DD ERRC G + G++D P+ W S+WR L V+WDE
Sbjct: 306 FLDAVNNKFNVGSRFTMRLEGDDFSERRCFGTIIGVSDFSPH-WKCSEWRSLEVQWDEFT 364
Query: 388 GSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLR 421
++VSPW+I+ +P +++ S +K R
Sbjct: 365 SFPGPKKVSPWDIEH--LMPAINVPRSFLLKNKR 396
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 53/103 (51%), Positives = 68/103 (66%), Gaps = 3/103 (2%)
Query: 658 KLFGFSLTSETPTP--SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFN 715
K FG S T +PT + Q R+CTKV QG +GRA+DL LNGY+ L+ ELE LF+
Sbjct: 514 KKFGLSQTLRSPTEIQNKQFSSSRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFD 573
Query: 716 MEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHI 758
++G L+ + W I +TDS+ D M+VGDDPW EFCN V KI I
Sbjct: 574 IKGQLQTRNQ-WEIAFTDSDEDKMLVGDDPWPEFCNMVKKIFI 615
>gi|259027684|gb|ACV91103.1| putative ETTIN protein [Petunia x hybrida]
Length = 241
Score = 274 bits (700), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 140/235 (59%), Positives = 176/235 (74%), Gaps = 17/235 (7%)
Query: 95 AFPPIEVPNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLP-----QPELEGLNLEAKQ 149
A+PP+ N L+P +FC+VVDV L A+ NDEVY QV L+P + + +++A
Sbjct: 17 AYPPVVYNN--LRPHVFCRVVDVNLQADTVNDEVYAQVPLVPDNQQIEQKWRDGDIDADT 74
Query: 150 LEDLGVDEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPS 209
E+ D EG G+S +TPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPS
Sbjct: 75 EEE---DLEGAGKS---TTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPS 128
Query: 210 QELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLG 269
QELVAKDLHG+ W+FRHIYRGQPRRHLLTTGWS FV++K LVSGDAVLFLR DGELRLG
Sbjct: 129 QELVAKDLHGMGWKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRTGDGELRLG 188
Query: 270 IRRSVQPRNGLPDSILSKQNSYPNVLSV--VANAVSTKSMFHVFYSPRATHADFV 322
+RR+ Q + + L+ + NV + V NA+S+++ F++ Y+PRA+ +DF+
Sbjct: 189 VRRAAQAKTC--SNYLAPYSQLLNVSGIVDVVNAISSRNAFNICYNPRASSSDFI 241
>gi|302772062|ref|XP_002969449.1| hypothetical protein SELMODRAFT_451564 [Selaginella moellendorffii]
gi|300162925|gb|EFJ29537.1| hypothetical protein SELMODRAFT_451564 [Selaginella moellendorffii]
Length = 779
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 181/457 (39%), Positives = 234/457 (51%), Gaps = 60/457 (13%)
Query: 37 SSSSSSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAF 96
+SS S SAN + S + +LWHACAG + LP G V+YFPQGH EQ A+ F
Sbjct: 2 ASSDPSNSANKAHSDHPKKGLDSQLWHACAGGMVQLPPVGAKVIYFPQGHGEQAAAIPDF 61
Query: 97 PPIEVPNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVD 156
P I C+V+ V LA+ E DEVY ++ L QPE+ L ++ D D
Sbjct: 62 P-------RSGGTILCRVISVDFLADAETDEVYAKMKL--QPEVAPAPLFGTRMGD---D 109
Query: 157 EEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKD 216
EE P F KTLT SD + GGFSVPR AE FP LDY P Q ++AKD
Sbjct: 110 EELVSSPTVVEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSIDPPVQTVLAKD 169
Query: 217 LHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQ- 275
+HG W+FRHIYRG PRRHLLTTGWS FV+QK LV+GDA++FLR GEL +G+RRS++
Sbjct: 170 VHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDAIVFLRSASGELCVGVRRSMRG 229
Query: 276 PRNGLPDSILS-----KQNSYPNVLSVVANAVSTKSM----------------------- 307
P NG DS +S Q+ Y +LS + S S
Sbjct: 230 PGNG--DSGISWHSSPGQSGYSELLSGNGSGTSGASFARNRARVTSKSVLEAASLAAAGQ 287
Query: 308 -FHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITD 365
F V Y PRA+ A+F + + + G RFKM FE +DS G ++ +
Sbjct: 288 AFEVVYYPRASTAEFCVRASVVKASLEHSWYPGMRFKMAFETEDSSRISWFMGTISAVQP 347
Query: 366 LDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID----RSVSLPPLSIQSSPRMKKLR 421
DP RWP+S WR L V WDE +VSPW+++ + LPP S+ PR KK+R
Sbjct: 348 ADPIRWPSSPWRILQVSWDEPDLLQGVNRVSPWQVELVSTLPMQLPPFSL---PR-KKIR 403
Query: 422 TGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQEN 458
P D GG + + ++ VL GQ N
Sbjct: 404 ------PLDLQFGESQGGFMGLPMAALANNVL-GQMN 433
>gi|12323853|gb|AAG51894.1|AC023913_2 auxin response factor, putative; 53188-50111 [Arabidopsis thaliana]
Length = 600
Score = 273 bits (698), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 149/370 (40%), Positives = 221/370 (59%), Gaps = 21/370 (5%)
Query: 55 SSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEV-PNFDLQPQIFCK 113
S +Y +LW CAGPL +PK G + YFPQG++E V +S+ E+ P DL ++ C+
Sbjct: 22 SYMYEQLWKLCAGPLCDIPKLGEKIYYFPQGNIELVEASTREELNELKPICDLPSKLQCR 81
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFC 173
V+ +QL +DE Y ++ L+P + Q+ + E R S F
Sbjct: 82 VIAIQLKVENNSDETYAEITLMP---------DTTQVV-IPTQNENQFRPLVNS----FT 127
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
K LTASDTS GGF VP++ A +C PPLD Q P+QEL+A DLHG +WRF H YRG P+
Sbjct: 128 KVLTASDTS--GGFFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHNYRGTPQ 185
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
RHLLTTGW+ F + K LV+GD ++F+RG+ GELR+GIRR+ + +P SI+S ++
Sbjct: 186 RHLLTTGWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIISIESMRHG 245
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
V++ +A + MF V Y P + F++ Y K++ + N +G+RF MRFE DD E
Sbjct: 246 VIASAKHAFDNQCMFIVVYKPSIRSSQFIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSE 305
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDR---SVSLPPLS 410
RR G + G++D P+ W S+WR L V+WDE +VSPWEI+ ++++P S
Sbjct: 306 RRYFGTIIGVSDFSPH-WKCSEWRNLEVQWDEFASFSRPNKVSPWEIEHLMPALNVPRPS 364
Query: 411 IQSSPRMKKL 420
+ + R++++
Sbjct: 365 LLKNKRLREV 374
Score = 102 bits (254), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 69/104 (66%), Gaps = 3/104 (2%)
Query: 658 KLFGFSLTSETPTP--SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFN 715
K FG S T +PT S Q R+CTKV QG + RA+DL LNGY+ L+ ELE LF+
Sbjct: 488 KKFGQSQTLRSPTEIQSKQFSSTRTCTKVQMQGVTIERAVDLSVLNGYDQLILELEELFD 547
Query: 716 MEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIY 759
++G L+ + W I +TDS++D M+VGDDPW EFCN V KI I+
Sbjct: 548 LKGQLQTRNQ-WEIAFTDSDDDKMLVGDDPWPEFCNMVKKILIF 590
>gi|79356673|ref|NP_174699.2| auxin response factor 22 [Arabidopsis thaliana]
gi|46576638|sp|Q9C8N7.2|ARFV_ARATH RecName: Full=Auxin response factor 22
gi|49616367|gb|AAT67080.1| ARF22 [Arabidopsis thaliana]
gi|332193587|gb|AEE31708.1| auxin response factor 22 [Arabidopsis thaliana]
Length = 598
Score = 272 bits (696), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 150/370 (40%), Positives = 223/370 (60%), Gaps = 23/370 (6%)
Query: 55 SSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEV-PNFDLQPQIFCK 113
S +Y +LW CAGPL +PK G + YFPQG++E V +S+ E+ P DL ++ C+
Sbjct: 22 SYMYEQLWKLCAGPLCDIPKLGEKIYYFPQGNIELVEASTREELNELKPICDLPSKLQCR 81
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFC 173
V+ +QL +DE Y ++ L+P + Q+ + E R S F
Sbjct: 82 VIAIQLKVENNSDETYAEITLMP---------DTTQVV-IPTQNENQFRPLVNS----FT 127
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
K LTASDTS GGF VP++ A +C PPLD Q P+QEL+A DLHG +WRF H YRG P+
Sbjct: 128 KVLTASDTS--GGFFVPKKHAIECLPPLDMSQPLPTQELLATDLHGNQWRFNHNYRGTPQ 185
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
RHLLTTGW+ F + K LV+GD ++F+RG+ GELR+GIRR+ + +P SI+S ++
Sbjct: 186 RHLLTTGWNAFTTSKKLVAGDVIVFVRGETGELRVGIRRAGHQQGNIPSSIISIESMRHG 245
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
V++ +A + MF V Y PR++ F++ Y K++ + N +G+RF MRFE DD E
Sbjct: 246 VIASAKHAFDNQCMFIVVYKPRSSQ--FIVSYDKFLDAVNNKFNVGSRFTMRFEGDDFSE 303
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDR---SVSLPPLS 410
RR G + G++D P+ W S+WR L V+WDE +VSPWEI+ ++++P S
Sbjct: 304 RRYFGTIIGVSDFSPH-WKCSEWRNLEVQWDEFASFSRPNKVSPWEIEHLMPALNVPRPS 362
Query: 411 IQSSPRMKKL 420
+ + R++++
Sbjct: 363 LLKNKRLREV 372
Score = 102 bits (253), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 69/104 (66%), Gaps = 3/104 (2%)
Query: 658 KLFGFSLTSETPTP--SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFN 715
K FG S T +PT S Q R+CTKV QG + RA+DL LNGY+ L+ ELE LF+
Sbjct: 486 KKFGQSQTLRSPTEIQSKQFSSTRTCTKVQMQGVTIERAVDLSVLNGYDQLILELEELFD 545
Query: 716 MEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIY 759
++G L+ + W I +TDS++D M+VGDDPW EFCN V KI I+
Sbjct: 546 LKGQLQTRNQ-WEIAFTDSDDDKMLVGDDPWPEFCNMVKKILIF 588
>gi|47496698|dbj|BAD19064.1| auxin response factor 4 [Cucumis sativus]
Length = 816
Score = 272 bits (696), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 137/288 (47%), Positives = 190/288 (65%), Gaps = 11/288 (3%)
Query: 121 ANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASD 180
A+ E DEVY Q+ L P L A++L++ + E G +P++ + FCKTLTASD
Sbjct: 3 ADAETDEVYAQMTLQP--------LSAQELKEAYLPAELG--TPSRQPTNYFCKTLTASD 52
Query: 181 TSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTG 240
TSTHGGFSVPRRAAE FPPLD+ Q P+QEL+A+DLH EW+FRHI+RGQP+RHLLTTG
Sbjct: 53 TSTHGGFSVPRRAAEKVFPPLDFSMQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTG 112
Query: 241 WSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVAN 300
WS+FVS K LV+GDAVLF+ + +L LGIRR+ +P+ +P S+LS + + +L+ A+
Sbjct: 113 WSVFVSAKRLVAGDAVLFIWNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHLGLLAAAAH 172
Query: 301 AVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRCNGV 359
A +T S F +F++PRA+ ++FVIP KYVK + + + +G RF+M FE ++
Sbjct: 173 AAATISRFTIFFNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETENQVFVATWAQ 232
Query: 360 VTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
+ P RW NS WR + V WDE + Q +VS WEI+ + P
Sbjct: 233 SLALVTWIPVRWQNSHWRSVKVGWDESTAGERQPKVSLWEIEPLTTFP 280
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 60/93 (64%), Gaps = 2/93 (2%)
Query: 676 PGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDS 734
P + KVHK G+ R++D+ + N Y +L SEL +F +EG L DP + GW++++ D
Sbjct: 680 PPNGTFVKVHKSGT-YSRSLDITKFNSYPELRSELARMFGLEGELEDPLRSGWQLVFVDR 738
Query: 735 ENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
ENDV+++GD PW EF N V I I + EEV+ M
Sbjct: 739 ENDVLLLGDGPWPEFVNSVWCIKILSPEEVQDM 771
>gi|168056839|ref|XP_001780425.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668101|gb|EDQ54715.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 420
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 168/398 (42%), Positives = 210/398 (52%), Gaps = 51/398 (12%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAG + LP G VVYFPQGH EQ AS+ FP VPN + C+VV V
Sbjct: 30 QLWHACAGGMVQLPHVGAKVVYFPQGHGEQAASTPEFPRTLVPNGSVP----CRVVSVNF 85
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
LA+ E DEV+ ++ L QPE+ +DL D SP P F KTLT S
Sbjct: 86 LADTETDEVFARICL--QPEI------GSSAQDLTDDSLA---SPPLEKPASFAKTLTQS 134
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + GGFS+PR AE FPPLDY P Q ++AKD+HG W+FRHIYRG PRRHLLTT
Sbjct: 135 DANNGGGFSIPRYCAETIFPPLDYCIDPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTT 194
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQP-RNG------------------L 280
GWS FV+QK LV+GDA++FLR GEL +G+RRS++ NG L
Sbjct: 195 GWSTFVNQKKLVAGDAIVFLRIASGELCVGVRRSMRGVSNGESSSWHSSISGVGDNGYAL 254
Query: 281 PDSILSKQNSYP---------------NVLSVVANAVSTKSMFHVFYSPRATHADFVIPY 325
SI S+ P +VL A AVS + F V Y PRA+ A+F +
Sbjct: 255 NSSIRSENQGSPTTSSFARDRARVTAKSVLEAAALAVSGER-FEVVYYPRASTAEFCVKA 313
Query: 326 QKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMVRWD 384
+ + G RFKM FE +DS G + + DP WP+S WR L V WD
Sbjct: 314 GLVKRALEQSWYAGMRFKMAFETEDSSRISWFMGTIAAVQAADPVLWPSSPWRVLQVTWD 373
Query: 385 ECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRT 422
E +VSPW+++ +LP S KKLRT
Sbjct: 374 EPDLLQGVNRVSPWQLELVATLPMQLPPVSLPKKKLRT 411
>gi|147857971|emb|CAN80371.1| hypothetical protein VITISV_014723 [Vitis vinifera]
Length = 1096
Score = 270 bits (689), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 159/349 (45%), Positives = 203/349 (58%), Gaps = 42/349 (12%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCK 113
SI ELW ACAGPL +LP G +VVYFPQGH EQVA+S ++PN+ +L ++ C
Sbjct: 25 SINPELWQACAGPLVNLPPAGTLVVYFPQGHSEQVAASMKKDVDAQIPNYPNLPSRLLCI 84
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFC 173
+ +V L A+ E DEVY Q+ L P P + E+ DL + K FC
Sbjct: 85 LHNVTLHADPETDEVYAQMTLQPVPAYDK---ESLLRSDLALKT-------NKPQTDFFC 134
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
KTLTASDTSTHGGFSVPRRAAE FPPLD+ Q P+QELVAKDLH W FRHIYRG
Sbjct: 135 KTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELVAKDLHDNVWTFRHIYRG--- 191
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
R + +L LGIRR+ + L S+LS + +
Sbjct: 192 --------------------------RDEKQQLLLGIRRANRQPTNLSSSVLSSDSMHIG 225
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIM-NPICIGTRFKMRFEMDDSP 352
+L+ A+A + S F VFY+PRA+ ++FVIP KY K N I +G RF+M FE ++S
Sbjct: 226 ILAAAAHAAANNSPFTVFYNPRASPSEFVIPLAKYYKAAYSNQISLGMRFRMMFETEESG 285
Query: 353 ERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
RR G +TGI+DLDP RW NS+WR L V WDE + + +VS WEI+
Sbjct: 286 TRRYMGTITGISDLDPVRWKNSQWRNLQVGWDESTAGERRNRVSIWEIE 334
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 64/89 (71%), Gaps = 2/89 (2%)
Query: 682 TKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMV 740
KV+K+G+ VGR+ID+ R +GY++L +L F +EG L D + GW+++Y D ENDV++
Sbjct: 987 AKVYKRGA-VGRSIDITRYSGYDELKQDLARRFGIEGQLEDRQRIGWKLVYVDHENDVLL 1045
Query: 741 VGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
VGDDPW EF N V I I + +EV++M++
Sbjct: 1046 VGDDPWEEFVNCVRCIKILSPQEVQQMSL 1074
>gi|302755594|ref|XP_002961221.1| hypothetical protein SELMODRAFT_437622 [Selaginella moellendorffii]
gi|300172160|gb|EFJ38760.1| hypothetical protein SELMODRAFT_437622 [Selaginella moellendorffii]
Length = 835
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 179/470 (38%), Positives = 234/470 (49%), Gaps = 71/470 (15%)
Query: 37 SSSSSSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAF 96
+SS S SAN + S + +LWHACAG + LP G V+YFPQGH EQ A+ F
Sbjct: 43 ASSDPSNSANKAHSDQPKKGLDSQLWHACAGGMVQLPPVGAKVIYFPQGHGEQAAAIPDF 102
Query: 97 PPIEVPNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVD 156
P I C+V+ V LA+ E DEVY ++ L QPE+ L ++ D D
Sbjct: 103 P-------RSGGTILCRVISVDFLADAETDEVYAKMKL--QPEVAPAPLFGTRMGD---D 150
Query: 157 EEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKD 216
EE P F KTLT SD + GGFSVPR AE FP LDY P Q ++AKD
Sbjct: 151 EELVSSPTVVEKPASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSIDPPVQTVLAKD 210
Query: 217 LHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQ- 275
+HG W+FRHIYRG PRRHLLTTGWS FV+QK LV+GDA++FLR GEL +G+RRS++
Sbjct: 211 VHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDAIVFLRSASGELCVGVRRSMRG 270
Query: 276 PRNG--------------LPDSI----LSKQNSYPNVLSVVANAVSTKSM---------- 307
P NG LP + + ++ Y +LS + S S
Sbjct: 271 PGNGDSGISWHSSPGQRSLPQNSSRWEIKSESGYSELLSGNGSGTSGASFARNRARVTSK 330
Query: 308 --------------FHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
F V Y PRA+ A+F + + + G RFKM FE +DS
Sbjct: 331 SVLEAASLAAAGQAFEVVYYPRASTAEFCVRASVVKASLEHSWYPGMRFKMAFETEDSSR 390
Query: 354 -RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID----RSVSLPP 408
G ++ + DP RWP+S WR L V WDE +VSPW+++ + LPP
Sbjct: 391 ISWFMGTISAVQPADPIRWPSSPWRILQVSWDEPDLLQGVNRVSPWQVELVSTLPMQLPP 450
Query: 409 LSIQSSPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQEN 458
S+ PR KK+R P D GG + + ++ VL GQ N
Sbjct: 451 FSL---PR-KKIR------PLDLQFGESQGGFMGLPMAALANNVL-GQMN 489
>gi|357453951|ref|XP_003597256.1| Auxin response factor [Medicago truncatula]
gi|355486304|gb|AES67507.1| Auxin response factor [Medicago truncatula]
Length = 755
Score = 265 bits (678), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 162/415 (39%), Positives = 219/415 (52%), Gaps = 61/415 (14%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAG + +P V YFPQGH E S+ F +F + P I C+V V+
Sbjct: 67 QLWHACAGGMVQMPSVNTKVFYFPQGHAEHAQSNVDFGD----SFRIPPLILCRVASVKF 122
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
LA+ E DEV++++ L+P L +LE+ D+ G S P F KTLT S
Sbjct: 123 LADSETDEVFSKITLIP--------LRNSELEN---DDSDGDGSENSEKPASFAKTLTQS 171
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + GGFSVPR AE FP LDY + P Q ++AKD+HG W+FRHIYRG PRRHLLTT
Sbjct: 172 DANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDVHGEVWKFRHIYRGTPRRHLLTT 231
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRS----------------------VQPR 277
GWS FV+QK LV+GD+++FLR + GEL +GIRR+ + P
Sbjct: 232 GWSSFVNQKKLVAGDSIVFLRAESGELFVGIRRAKRGIVNGLETPSGWSSGNGNCGLGPY 291
Query: 278 NGLPDSILSKQN----------------SYPNVLSVVANAVSTKSMFHVFYSPRATHADF 321
G + L ++N S +V + A S ++ F V Y PRA+ +F
Sbjct: 292 GGAFTAFLREENKLGGVGGNLGGGRVKVSGESVKEAMRLAASNQT-FEVVYYPRASTPEF 350
Query: 322 VIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLM 380
I + C G RFKM FE +DS G ++ + +DP RWPNS WR L
Sbjct: 351 CIKTSAVKAAMRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVVDPIRWPNSPWRLLQ 410
Query: 381 VRWDECIGSDHQEQVSPW--EIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYPV 433
V WDE + ++VSPW E+ ++S+ L+ S PR KKLR PD+P+
Sbjct: 411 VTWDEPDLLHNVKRVSPWLVELVSNMSMIHLAPFSPPR-KKLRFPQH---PDFPL 461
>gi|227202766|dbj|BAH56856.1| AT4G23980 [Arabidopsis thaliana]
Length = 297
Score = 265 bits (678), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 142/299 (47%), Positives = 191/299 (63%), Gaps = 28/299 (9%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEV--PNFDLQPQIFCKV 114
+Y ELW CAGPL +P+ V YFPQGH+EQ+ +S+ + P F L P+I C V
Sbjct: 9 LYDELWKLCAGPLVDVPQAQERVYYFPQGHMEQLEASTQQVDLNTMKPLFVLPPKILCNV 68
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTP----- 169
++V L A K+ DEVY Q+ L+P + E VDE SP S P
Sbjct: 69 MNVSLQAEKDTDEVYAQITLIP------VGTE--------VDEP---MSPDPSPPELQRP 111
Query: 170 --HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHI 227
H F K LTASDTSTHGGFSV R+ A +C PPLD QQ P+QELVA+D+HG +W+F+HI
Sbjct: 112 KVHSFSKVLTASDTSTHGGFSVLRKHATECLPPLDMTQQTPTQELVAEDVHGYQWKFKHI 171
Query: 228 YRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSK 287
+RGQPRRHLLTTGWS FV+ K LV+GD +FLRG++GELR+G+RR+ ++ +P S++S
Sbjct: 172 FRGQPRRHLLTTGWSTFVTSKRLVAGDTFVFLRGENGELRVGVRRANLQQSSMPSSVISS 231
Query: 288 QNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRF 346
+ + VL+ +A TK+MF V+Y PR + F+I KY++ + N +G RFKMR
Sbjct: 232 HSMHLGVLATARHATQTKTMFIVYYKPRT--SQFIISLNKYLEAMSNKFSVGMRFKMRL 288
>gi|42571255|ref|NP_973701.1| auxin response factor 11 [Arabidopsis thaliana]
gi|330255621|gb|AEC10715.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 514
Score = 265 bits (676), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 129/260 (49%), Positives = 173/260 (66%), Gaps = 5/260 (1%)
Query: 164 PTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWR 223
P K T F K LTASDTSTHGGFSV R+ A +C P LD Q P+QELVA+DLHG EWR
Sbjct: 29 PAKPTVDSFVKILTASDTSTHGGFSVLRKHATECLPSLDMTQPTPTQELVARDLHGYEWR 88
Query: 224 FRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDS 283
F+HI+RGQPRRHLLTTGWS FV+ K LV+GDA +FLRG+ G+LR+G+RR + ++ +P S
Sbjct: 89 FKHIFRGQPRRHLLTTGWSTFVTSKRLVAGDAFVFLRGETGDLRVGVRRLAKQQSTMPAS 148
Query: 284 ILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFK 343
++S Q+ VL+ ++AV+T ++F VFY PR + F+I KY+ + N +G R++
Sbjct: 149 VISSQSMRLGVLATASHAVTTTTIFVVFYKPRISQ--FIISVNKYMMAMKNGFSLGMRYR 206
Query: 344 MRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID-- 401
MRFE ++SPER G + G DL +WP SKWR L ++WDE +VSPWEI+
Sbjct: 207 MRFEGEESPERIFTGTIIGSGDLS-SQWPASKWRSLQIQWDEPSSIQRPNKVSPWEIEPF 265
Query: 402 RSVSLPPLSIQSSPRMKKLR 421
+L P Q + K+ R
Sbjct: 266 SPSALTPTPTQQQSKSKRSR 285
Score = 105 bits (262), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 74/147 (50%), Gaps = 34/147 (23%)
Query: 654 AAGCKLFGFSLTSE---------------------------------TPTPSSQSPGKRS 680
+ C+LFGF LTS+ +P Q RS
Sbjct: 345 TSSCRLFGFDLTSKPASATIPHDKQLISVDSNISDSTTKCQDPNSSNSPKEQKQQTSTRS 404
Query: 681 CTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMV 740
KV QG+ VGRA+DL L Y++L+ ELE +F +EG L P W I++TD E D M+
Sbjct: 405 RIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGEL-SPKDKWAIVFTDDEGDRML 463
Query: 741 VGDDPWHEFCNEVSKIHIYTQEEVEKM 767
VGDDPW+EFC K+ IY +EV+KM
Sbjct: 464 VGDDPWNEFCKMAKKLFIYPSDEVKKM 490
>gi|75261833|sp|Q9AV47.1|ARFV_ORYSJ RecName: Full=Auxin response factor 22
gi|13384374|gb|AAK21342.1|AC024594_6 putative transcription factor [Oryza sativa Japonica Group]
Length = 698
Score = 265 bits (676), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 164/412 (39%), Positives = 216/412 (52%), Gaps = 45/412 (10%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPI--EVPNFDLQPQIFCKVVDV 117
+LWHACAG + +P + V YF QGH E E+ L P + C+V V
Sbjct: 16 QLWHACAGGMVQMPAPRSRVYYFAQGHAEHADGGGGAAAAAAELGPRALPPLVLCRVEGV 75
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
Q LA++++DEVY ++ L P E E +L LG G P+ P F KTLT
Sbjct: 76 QFLADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGA--AGDAAEPSPEKPTSFAKTLT 133
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
SD + GGFSVPR AE FP LDY+ P Q ++AKD+HGV W+FRHIYRG PRRHLL
Sbjct: 134 QSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLL 193
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPD--------------- 282
TTGWS FV+QK LV+GD+++FLR + GEL +GIRR+ + G +
Sbjct: 194 TTGWSTFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACGGMECMSGWNAPGYGGGGF 253
Query: 283 -SILSKQNS----------------YPNVLSVV--ANAVSTKSMFHVFYSPRATHADFVI 323
+ L ++ S + VV A+ S+ F V Y PRA+ DFV+
Sbjct: 254 SAFLKEEESKLMKGHGGGGYMKGKGKVRMADVVEAASLASSGQPFEVAYYPRASTPDFVV 313
Query: 324 PYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMVR 382
+ C G RFKM FE +DS G ++ + DP RWPNS WR L V
Sbjct: 314 KAASVQAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSVQVADPNRWPNSPWRLLQVT 373
Query: 383 WDECIGSDHQEQVSPWEIDRSVSLPPLSIQ--SSPRMKKLRTGLQAPPPDYP 432
WDE + + VSPW ++ S+PP+ + SSPR KKLR P PD+P
Sbjct: 374 WDEPDLLQNVKCVSPWLVELVSSIPPIHLGPFSSPR-KKLRV---PPHPDFP 421
>gi|110289274|gb|AAP54297.2| Auxin response factor 16, putative, expressed [Oryza sativa
Japonica Group]
gi|222613018|gb|EEE51150.1| hypothetical protein OsJ_31911 [Oryza sativa Japonica Group]
Length = 760
Score = 264 bits (675), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 164/412 (39%), Positives = 216/412 (52%), Gaps = 45/412 (10%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPI--EVPNFDLQPQIFCKVVDV 117
+LWHACAG + +P + V YF QGH E E+ L P + C+V V
Sbjct: 78 QLWHACAGGMVQMPAPRSRVYYFAQGHAEHADGGGGAAAAAAELGPRALPPLVLCRVEGV 137
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
Q LA++++DEVY ++ L P E E +L LG G P+ P F KTLT
Sbjct: 138 QFLADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGA--AGDAAEPSPEKPTSFAKTLT 195
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
SD + GGFSVPR AE FP LDY+ P Q ++AKD+HGV W+FRHIYRG PRRHLL
Sbjct: 196 QSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLL 255
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPD--------------- 282
TTGWS FV+QK LV+GD+++FLR + GEL +GIRR+ + G +
Sbjct: 256 TTGWSTFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACGGMECMSGWNAPGYGGGGF 315
Query: 283 -SILSKQNS----------------YPNVLSVV--ANAVSTKSMFHVFYSPRATHADFVI 323
+ L ++ S + VV A+ S+ F V Y PRA+ DFV+
Sbjct: 316 SAFLKEEESKLMKGHGGGGYMKGKGKVRMADVVEAASLASSGQPFEVAYYPRASTPDFVV 375
Query: 324 PYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMVR 382
+ C G RFKM FE +DS G ++ + DP RWPNS WR L V
Sbjct: 376 KAASVQAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSVQVADPNRWPNSPWRLLQVT 435
Query: 383 WDECIGSDHQEQVSPWEIDRSVSLPPLSIQ--SSPRMKKLRTGLQAPPPDYP 432
WDE + + VSPW ++ S+PP+ + SSPR KKLR P PD+P
Sbjct: 436 WDEPDLLQNVKCVSPWLVELVSSIPPIHLGPFSSPR-KKLRV---PPHPDFP 483
>gi|312282557|dbj|BAJ34144.1| unnamed protein product [Thellungiella halophila]
Length = 702
Score = 264 bits (674), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 154/407 (37%), Positives = 208/407 (51%), Gaps = 55/407 (13%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAG + +P + V YF QGH E + F VP P I C+VV V+
Sbjct: 10 QLWHACAGSMVQIPSVNSTVFYFAQGHTEHAHAPPDFHAPRVP-----PLILCRVVAVKF 64
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPT-KSTPHMFCKTLTA 178
LA+ E DEV++++ LLP P G +L+ + LG+ G P P F KTLT
Sbjct: 65 LADAETDEVFSKITLLPLP---GNDLDLENDAVLGLTPSPDGNGPNGNEKPASFAKTLTQ 121
Query: 179 SDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLT 238
SD + GGFSVPR AE FP LDY + P Q ++AKD+HG W+FRHIYRG PRRHLLT
Sbjct: 122 SDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLLT 181
Query: 239 TGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNS---YPNVL 295
TGWS FV+QK L++GD+++FLR + G+L +GIRR+ R GL + + N+ YP
Sbjct: 182 TGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRA--KRGGLGSNGVGSDNNNIPYPGFS 239
Query: 296 SVVANAVSTKS----------------------------------------MFHVFYSPR 315
+ + +T S F V Y PR
Sbjct: 240 GFLRDDETTTSKLMMMKRSGGNGNDANAAAGGGRVRVEAVAEAVARAARGQAFEVVYYPR 299
Query: 316 ATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNS 374
A+ +F + + C G RFKM FE +DS G V+ + DP RWPNS
Sbjct: 300 ASTPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNS 359
Query: 375 KWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLR 421
WR L V WDE + ++VSPW ++ ++P + + KKLR
Sbjct: 360 PWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPTIHLSPFSPRKKLR 406
>gi|218184755|gb|EEC67182.1| hypothetical protein OsI_34050 [Oryza sativa Indica Group]
Length = 690
Score = 263 bits (673), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 164/412 (39%), Positives = 216/412 (52%), Gaps = 45/412 (10%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPI--EVPNFDLQPQIFCKVVDV 117
+LWHACAG + +P + V YF QGH E E+ L P + C+V V
Sbjct: 36 QLWHACAGGMVQMPAPRSRVYYFAQGHAEHADGGGGAAAAAAELGPRALPPLVLCRVEGV 95
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
Q LA++++DEVY ++ L P E E +L LG G P+ P F KTLT
Sbjct: 96 QFLADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGA--AGDAAEPSPEKPTSFAKTLT 153
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
SD + GGFSVPR AE FP LDY+ P Q ++AKD+HGV W+FRHIYRG PRRHLL
Sbjct: 154 QSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLL 213
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPD--------------- 282
TTGWS FV+QK LV+GD+++FLR + GEL +GIRR+ + G +
Sbjct: 214 TTGWSTFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACGGMECMSGWNAPGYGGGGF 273
Query: 283 -SILSKQNS----------------YPNVLSVV--ANAVSTKSMFHVFYSPRATHADFVI 323
+ L ++ S + VV A+ S+ F V Y PRA+ DFV+
Sbjct: 274 SAFLKEEESKLMKGHGGGGYMKGKGKVRMADVVEAASLASSGQPFEVAYYPRASTPDFVV 333
Query: 324 PYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMVR 382
+ C G RFKM FE +DS G ++ + DP RWPNS WR L V
Sbjct: 334 KAASVQAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSVQVADPNRWPNSPWRLLQVT 393
Query: 383 WDECIGSDHQEQVSPWEIDRSVSLPPLSIQ--SSPRMKKLRTGLQAPPPDYP 432
WDE + + VSPW ++ S+PP+ + SSPR KKLR P PD+P
Sbjct: 394 WDEPDLLQNVKCVSPWLVELVSSIPPIHLGPFSSPR-KKLRV---PPHPDFP 441
>gi|297798970|ref|XP_002867369.1| hypothetical protein ARALYDRAFT_913475 [Arabidopsis lyrata subsp.
lyrata]
gi|297313205|gb|EFH43628.1| hypothetical protein ARALYDRAFT_913475 [Arabidopsis lyrata subsp.
lyrata]
Length = 670
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 155/410 (37%), Positives = 224/410 (54%), Gaps = 55/410 (13%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAG + +P + V YFPQGH E +A+ ++ N + P + C+V+ ++
Sbjct: 19 QLWHACAGGMVRMPPMNSKVFYFPQGHAE-----NAYDCVDFGNLPIHPMVLCRVLAIKY 73
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
+A+ E+DEVY ++ L+P + E ++ E ED G S ++ TP F KTLT S
Sbjct: 74 MADAESDEVYAKLRLIPLKDDEYVDHEYGDGED-----SNGFESNSEKTPS-FAKTLTQS 127
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + GGFSVPR AE FP LDY + P Q ++AKD+HG W+FRHIYRG PRRHLLTT
Sbjct: 128 DANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTPRRHLLTT 187
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPD----------------- 282
GWS FV+QK LV+GD+++F+R ++G+L +GIRR+ R G+ +
Sbjct: 188 GWSNFVNQKKLVAGDSIVFMRAENGDLCVGIRRA--KRGGIGNGPEYSAGWNPIGGSCGY 245
Query: 283 -SILSKQNS------------------YPNVLSVVANAVSTKSMFHVFYSPRATHADFVI 323
S+L + S +V+ A+S + F V Y PRA+ ++F +
Sbjct: 246 SSLLREDESNSLRRSNCSLADRKGKVTAESVIEAATLAISGRP-FEVVYYPRASTSEFCV 304
Query: 324 PYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMVR 382
+ P C G RFKM FE +DS G V+ + DP RWPNS WR L V
Sbjct: 305 KAVDARAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVNVSDPIRWPNSPWRLLQVA 364
Query: 383 WDECIGSDHQEQVSPWEIDRSVSLPPLSIQS-SPRMKKLRTGLQAPPPDY 431
WDE + ++V+PW ++ ++ P+ + S SP KK+R PDY
Sbjct: 365 WDEPDLLQNVKRVNPWLVELVSNVHPIPLTSFSPPRKKMRLPQH---PDY 411
Score = 40.8 bits (94), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Query: 683 KVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVG 742
KV + VGR +DL L Y +L +L +F ++ +LY D+ + G
Sbjct: 588 KVFMESDDVGRTLDLSVLGSYEELSRKLSDMFG----IKKSEMLSSVLYRDASGAIKYAG 643
Query: 743 DDPWHEFCNEVSKIHIYTQEEVEKMTI 769
++P+ EF ++ I T++ E + I
Sbjct: 644 NEPFSEFLKTARRLTILTEQGSESVVI 670
>gi|356550188|ref|XP_003543470.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 670
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 157/403 (38%), Positives = 216/403 (53%), Gaps = 45/403 (11%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAG + +P + V YFPQGH E S+ F +P + P I C+V V+
Sbjct: 11 QLWHACAGGMVQMPPVNSKVFYFPQGHAEHAQSNVDFGAARIP---IPPLILCRVAAVKF 67
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
LA+ E DEV+ ++ L+P E L+ E D + G + P F KTLT S
Sbjct: 68 LADPETDEVFARLRLVPLRNSE-LDYE---------DSDANGEAEGSEKPASFAKTLTQS 117
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + GGFSVPR AE FP LDY + P Q ++A+D+HG W+FRHIYRG PRRHLLTT
Sbjct: 118 DANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIARDVHGEVWKFRHIYRGTPRRHLLTT 177
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPD----------------- 282
GWS FV+QK LV+GD+++FLR ++G+L +GIRR+ + G P+
Sbjct: 178 GWSSFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGGVGGPEGPCGWSSYGSGGLGLGP 237
Query: 283 -----SILSKQN-----SYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKII 332
+ +++ S +V V A S ++ F V Y PRA +F I +
Sbjct: 238 YGAFSGFMREESGRAKVSGESVREAVTLAASNQA-FEVVYYPRANTPEFCIRTSAVRGAM 296
Query: 333 MNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDH 391
C G RFKM FE +DS G + + LDP RWPNS WR L V WDE +
Sbjct: 297 RIQWCSGMRFKMPFETEDSSRISWFMGTIASVQVLDPIRWPNSPWRLLQVSWDEPDLLHN 356
Query: 392 QEQVSPWEIDRSVSLPPLSIQS-SPRMKKLRTGL--QAPPPDY 431
++VSPW ++ ++P + + + SP KKLR L Q P P +
Sbjct: 357 VKRVSPWLVELVSNVPIIHLAAFSPPRKKLRFPLDVQFPIPSF 399
Score = 43.1 bits (100), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 25/130 (19%)
Query: 672 SSQSPGKRSCT--------------KVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNME 717
SS SPG S T KV + VGR +DL L+ Y +L L ++F +E
Sbjct: 536 SSVSPGNLSSTAEFSWQLGSDTSHCKVFMESEDVGRTLDLSCLSSYQELYMRLANMFGIE 595
Query: 718 --GLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYT---QEEVEKMTIGTT 772
+L +LY DS + +G++P+ EF ++ I T ++ ++ I T
Sbjct: 596 RSDMLS------HVLYCDSSGALKQIGEEPFSEFMKTAKRLTILTDSNNKDSRRVWITGT 649
Query: 773 DDTQSCLDQA 782
+ + LD A
Sbjct: 650 RNAEHGLDAA 659
>gi|255556996|ref|XP_002519531.1| Auxin response factor, putative [Ricinus communis]
gi|223541394|gb|EEF42945.1| Auxin response factor, putative [Ricinus communis]
Length = 702
Score = 263 bits (671), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 177/488 (36%), Positives = 244/488 (50%), Gaps = 74/488 (15%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNF-DLQPQIFCKVVDVQ 118
+LWHACAG + +P V YFPQGH E + S ++ NF L P I C+V ++
Sbjct: 23 QLWHACAGGMVQMPAVNTKVFYFPQGHAEHASGS-----VDFRNFPRLPPYILCRVSGIK 77
Query: 119 LLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTA 178
+A+ E DEVY ++ L P E + E+ GV G G+ ++ P F KTLT
Sbjct: 78 FMADPETDEVYAKIKLTPICSKE----NGMEDEEEGVINGGEGQ---ENKPASFAKTLTQ 130
Query: 179 SDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLT 238
SD + GGFSVPR AE FP LDY P Q ++AKD+HG W+FRHIYRG PRRHLLT
Sbjct: 131 SDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLT 190
Query: 239 TGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQ---------- 288
TGWS FV+ K LV+GD+++FLR ++G+L +GIRR+ + G P+S +
Sbjct: 191 TGWSTFVNHKKLVAGDSIVFLRAENGDLCIGIRRAKRGVGGGPESSWNPAGGNCVMPYGG 250
Query: 289 -NSY----PNVLSVVANA-------------VSTKSM------------FHVFYSPRATH 318
NS+ N LS N V +S+ F V Y PRA+
Sbjct: 251 FNSFFREDGNKLSRSGNGNGPGENALTGKGKVKAESVIEAATLAANGQPFEVVYYPRAST 310
Query: 319 ADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWR 377
+F + C G RFKM FE +DS G + + DP RWP+S WR
Sbjct: 311 PEFCVKASMVKAAFQIRWCSGMRFKMAFETEDSSRISWFMGTIASVQVADPLRWPDSPWR 370
Query: 378 CLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS-SPRMKKLRTGLQAPPPDYPVSAR 436
L V WDE + ++VSPW ++ ++P + + SP KKLR PD+P+ ++
Sbjct: 371 LLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPPRKKLRMPQH---PDFPLDSQ 427
Query: 437 GGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHPLGFEMRAPAHQSLALNGIRKDN 496
F S +L G SP +GC N P G + AH L L+ +R
Sbjct: 428 ------FPLPTFSGNLL------GPTSP-FGCLPDNTPAGMQGARHAHYGLPLSDLR--- 471
Query: 497 INELVRAL 504
+N+L +L
Sbjct: 472 LNKLQTSL 479
>gi|218201472|gb|EEC83899.1| hypothetical protein OsI_29915 [Oryza sativa Indica Group]
gi|222640880|gb|EEE69012.1| hypothetical protein OsJ_27964 [Oryza sativa Japonica Group]
Length = 1031
Score = 263 bits (671), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 141/305 (46%), Positives = 193/305 (63%), Gaps = 10/305 (3%)
Query: 121 ANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASD 180
A+ + DEVY ++ L P + + E +L + + T+ FCKTLTASD
Sbjct: 3 ADPDTDEVYARMTLQPVSNVTQCDKETLLASELALKQ-------TRPQTEFFCKTLTASD 55
Query: 181 TSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTG 240
TSTHGGFSVPRRAAE FP LD+ Q P+QEL A+DLH W FRHIYRGQP+RHLLTTG
Sbjct: 56 TSTHGGFSVPRRAAERIFPRLDFSMQPPAQELQARDLHDNVWTFRHIYRGQPKRHLLTTG 115
Query: 241 WSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVAN 300
WS+FVS K L++GD+VLF+R +L LGIRR+ + L S+LS + + +L+ A+
Sbjct: 116 WSLFVSGKRLLAGDSVLFIRDAKQQLLLGIRRANRQPTNLSSSVLSSDSMHIGILAAAAH 175
Query: 301 AVSTKSMFHVFYSPRATHADFVIPYQKYVKIIM-NPICIGTRFKMRFEMDDSPERRCNGV 359
A + S F ++Y+PRA+ ++FVIP+ KY K + N + +G RF+M FE ++S RR G
Sbjct: 176 AAANNSQFTIYYNPRASTSEFVIPFAKYQKAVYGNQLSLGMRFRMMFETEESGTRRYMGT 235
Query: 360 VTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKK 419
+TGI+DLDP RW S WR + V WDE ++ + +VS WEI+ ++ P I SP
Sbjct: 236 ITGISDLDPVRWKTSHWRNIQVAWDEAAPTERRTRVSLWEIEPIIA--PFFIYPSPLFTA 293
Query: 420 LRTGL 424
R L
Sbjct: 294 KRPRL 298
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 70/106 (66%), Gaps = 7/106 (6%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSEND 737
R+ TKVHK+G+ VGR+ID+ R +GY++L ++ +F +EG L D + GW+++Y D E D
Sbjct: 913 RTYTKVHKRGA-VGRSIDINRYSGYDELKHDVARMFGIEGQLGDQNRVGWKLVYEDHEKD 971
Query: 738 VMVVGDDPWHEFCNEVSKIHIYT-QEEVEKMTIGTTDDT----QSC 778
V++VGDDPW +F V I I + QEE++ +G D+ Q+C
Sbjct: 972 VLLVGDDPWEDFVKCVRCIRILSPQEEMQMRLVGDFGDSFLPNQAC 1017
>gi|15226389|ref|NP_180402.1| auxin response factor 10 [Arabidopsis thaliana]
gi|46576666|sp|Q9SKN5.1|ARFJ_ARATH RecName: Full=Auxin response factor 10
gi|12484203|gb|AAG54000.1|AF336919_1 auxin response factor 10 [Arabidopsis thaliana]
gi|13272405|gb|AAK17141.1|AF325073_1 unknown protein [Arabidopsis thaliana]
gi|4432846|gb|AAD20695.1| unknown protein [Arabidopsis thaliana]
gi|225898553|dbj|BAH30407.1| hypothetical protein [Arabidopsis thaliana]
gi|330253016|gb|AEC08110.1| auxin response factor 10 [Arabidopsis thaliana]
Length = 693
Score = 262 bits (670), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 156/407 (38%), Positives = 207/407 (50%), Gaps = 60/407 (14%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAG + +P + V YF QGH E + F VP P I C+VV V+
Sbjct: 10 QLWHACAGSMVQIPSLNSTVFYFAQGHTEHAHAPPDFHAPRVP-----PLILCRVVSVKF 64
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGV-----DEEGGGRSPTKSTPHMFCK 174
LA+ E DEV+ ++ LLP P G +L+ + LG+ D G G K P F K
Sbjct: 65 LADAETDEVFAKITLLPLP---GNDLDLENDAVLGLTPPSSDGNGNG----KEKPASFAK 117
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLT SD + GGFSVPR AE FP LDY + P Q ++AKD+HG W+FRHIYRG PRR
Sbjct: 118 TLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDIHGETWKFRHIYRGTPRR 177
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS FV+QK L++GD+++FLR + G+L +GIRR+ R GL S N YP
Sbjct: 178 HLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRA--KRGGL-GSNAGSDNPYPGF 234
Query: 295 LSVVANAVSTKSM---------------------------------------FHVFYSPR 315
+ + ST + F V Y PR
Sbjct: 235 SGFLRDDESTTTTSKLMMMKRNGNNDGNAAATGRVRVEAVAEAVARAACGQAFEVVYYPR 294
Query: 316 ATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNS 374
A+ +F + + C G RFKM FE +DS G V+ + DP RWPNS
Sbjct: 295 ASTPEFCVKAADVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNS 354
Query: 375 KWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLR 421
WR L V WDE + ++VSPW ++ ++P + + KK+R
Sbjct: 355 PWRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPTIHLSPFSPRKKIR 401
>gi|379323224|gb|AFD01311.1| auxin response factor 16-1 [Brassica rapa subsp. pekinensis]
Length = 647
Score = 262 bits (669), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 152/402 (37%), Positives = 220/402 (54%), Gaps = 47/402 (11%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAG + +P + V YFPQGH E +A+ ++ N + P + C+V+ ++
Sbjct: 19 QLWHACAGGMVRMPPMNSKVFYFPQGHAE-----NAYDHVDFKNLPIPPMVLCRVLAIKY 73
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
+A+ E+DEV+ ++ L+P L + D G + G G + ++ TP F KTLT S
Sbjct: 74 MADPESDEVFAKLKLIP------LKDNDHEYRD-GEESNGLGSNNSEKTPS-FAKTLTQS 125
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + GGFSVPR AE FP LDY + P Q ++AKD+HG W+FRHIYRG PRRHLLTT
Sbjct: 126 DANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGEVWKFRHIYRGTPRRHLLTT 185
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQ---------------PRNGLPDSI 284
GWS FV+QK LV+GD+++F+R ++G+L +GIRR+ + P G S+
Sbjct: 186 GWSNFVNQKKLVAGDSIVFMRAENGDLCVGIRRAKRGGIGNNGLEYSAGWNPIGGSYSSL 245
Query: 285 LSKQN--------------SYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVK 330
L + +V+ AVS + F V Y PRA+ ++F +
Sbjct: 246 LRDDERRSSSSLADRKGKVTAESVVEAAKLAVSGRG-FEVVYYPRASSSEFCVKALDARA 304
Query: 331 IIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGS 389
+ P C G RFKM FE +DS G V+ ++ DP RWPNS WR L V WDE
Sbjct: 305 AMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVSVSDPVRWPNSPWRLLQVAWDEPDLL 364
Query: 390 DHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDY 431
+ ++V+PW ++ ++ P+ SP KK+R PDY
Sbjct: 365 QYVKRVNPWLVELVSNVHPIIPSFSPPRKKMRLPQH---PDY 403
>gi|283806528|tpg|DAA06632.1| TPA_exp: auxin response factor [Physcomitrella patens]
Length = 714
Score = 261 bits (668), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 171/425 (40%), Positives = 216/425 (50%), Gaps = 82/425 (19%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAG + LP G VVYFPQGH EQ AS+ FP VPN + C+VV V
Sbjct: 39 QLWHACAGGMVQLPHVGAKVVYFPQGHGEQAASTPEFPRTLVPNGS----VPCRVVSVNF 94
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
LA+ E DEV+ ++ L QPE+ +DL D SP P F KTLT S
Sbjct: 95 LADTETDEVFARICL--QPEI------GSSAQDLTDDSLA---SPPLEKPASFAKTLTQS 143
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + GGFS+PR AE FPPLDY P Q ++AKD+HG W+FRHIYRG PRRHLLTT
Sbjct: 144 DANNGGGFSIPRYCAETIFPPLDYCIDPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTT 203
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRS---------------------VQPR- 277
GWS FV+QK LV+GDA++FLR GEL +G+RRS ++P
Sbjct: 204 GWSTFVNQKKLVAGDAIVFLRIASGELCVGVRRSMRGVSNGESSSWHSSISNASTIRPSR 263
Query: 278 ------------------NG--LPDSILSKQNSYP---------------NVLSVVANAV 302
NG L SI S+ P +VL A AV
Sbjct: 264 WEVKGTESFSDFLGGVGDNGYALNSSIRSENQGSPTTSSFARDRARVTAKSVLEAAALAV 323
Query: 303 STKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVT 361
S + F V Y PRA+ A+F + + + G RFKM FE +DS G +
Sbjct: 324 SGE-RFEVVYYPRASTAEFCVKAGLVKRALEQSWYAGMRFKMAFETEDSSRISWFMGTIA 382
Query: 362 GITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS----LPPLSIQSSPRM 417
+ DP WP+S WR L V WDE +VSPW+++ + LPP+S+ P+
Sbjct: 383 AVQAADPVLWPSSPWRVLQVTWDEPDLLQGVNRVSPWQLELVATLPMQLPPVSL---PK- 438
Query: 418 KKLRT 422
KKLRT
Sbjct: 439 KKLRT 443
>gi|19310546|gb|AAL85006.1| unknown protein [Arabidopsis thaliana]
Length = 1045
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 127/231 (54%), Positives = 161/231 (69%)
Query: 171 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRG 230
FCKTLTASDTSTHGGFSVPRRAAE FP LD+ Q P QELVAKD+H W FRHIYRG
Sbjct: 7 FFCKTLTASDTSTHGGFSVPRRAAEKIFPALDFSMQPPCQELVAKDIHDNTWTFRHIYRG 66
Query: 231 QPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNS 290
QP+RHLLTTGWS+FVS K L +GD+VLF+R +L LGIRR+ + + L S++S +
Sbjct: 67 QPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDGKAQLLLGIRRANRQQPALSSSVISSDSM 126
Query: 291 YPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDD 350
+ VL+ A+A + S F +FY+PRA A+FV+P KY K + + +G RF+M FE ++
Sbjct: 127 HIGVLAAAAHANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMYAQVSLGMRFRMIFETEE 186
Query: 351 SPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
RR G VTGI+DLDP RW NS+WR L + WDE D +VS W+I+
Sbjct: 187 CGVRRYMGTVTGISDLDPVRWKNSQWRNLQIGWDESAAGDRPSRVSVWDIE 237
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 67/98 (68%), Gaps = 2/98 (2%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDP-AKGWRILY 731
+Q+ R+ TKV K+GS VGR+ID+ R GY++L +L +F +EG L DP W+++Y
Sbjct: 912 AQTQRMRTYTKVQKRGS-VGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVY 970
Query: 732 TDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
D END+++VGDDPW EF N V I I + EV++M++
Sbjct: 971 VDHENDILLVGDDPWEEFVNCVQSIKILSSAEVQQMSL 1008
>gi|225435334|ref|XP_002282437.1| PREDICTED: auxin response factor 18-like [Vitis vinifera]
Length = 711
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 181/502 (36%), Positives = 245/502 (48%), Gaps = 75/502 (14%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPI-EVPNFDLQPQIFCKVVDVQ 118
+LWHACAG + +P + V YFPQGH E ++ F +P + C+V V+
Sbjct: 11 QLWHACAGGMVQMPLVSSKVFYFPQGHAEHAHTNVDFAAAPRIPAL-----VLCRVAAVK 65
Query: 119 LLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTA 178
+A+ E DEVY ++ L+P E ED GV G +P K P F KTLT
Sbjct: 66 FMADPETDEVYAKIRLVPIANNE------LDCEDDGVMGSSGSEAPEK--PASFAKTLTQ 117
Query: 179 SDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLT 238
SD + GGFSVPR AE FP LDY P Q ++AKD+HG W+FRHIYRG PRRHLLT
Sbjct: 118 SDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVIAKDVHGEIWKFRHIYRGTPRRHLLT 177
Query: 239 TGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDS-----ILSKQNSYPN 293
TGWS FV+QK LV+GD+++FLR ++G+L +GIRR+ + G P+S S +P
Sbjct: 178 TGWSTFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGIAGGPESPSGWNPASPYAGFPK 237
Query: 294 VL---------------------------------SVV--ANAVSTKSMFHVFYSPRATH 318
L SVV A + F V Y PRA+
Sbjct: 238 FLREDESKLMRNGVGGNSNPGSGGGLRGGRRVRPESVVEAATLAANGQPFEVVYYPRAST 297
Query: 319 ADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWR 377
+F + + C G RFKM FE +DS G ++ + DP RWPNS WR
Sbjct: 298 PEFCVKASGVRSAVRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPIRWPNSPWR 357
Query: 378 CLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS-SPRMKKLRTGLQAPPPDYPVSAR 436
L V WDE + ++VSPW ++ ++P + + SP KKLR PD+P +
Sbjct: 358 LLQVTWDEPDLLQNVKRVSPWLVELVSNMPIIHLSPFSPPRKKLRIPQH---PDFPFDGQ 414
Query: 437 GGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHPLGFEMRAPAHQSLALNGIRKDN 496
F S SS L G SPL C N P G + A ++L+ + +
Sbjct: 415 ------FPMSSFSSNPL------GSSSPLC-CLPDNTPAGIQGARHAQYGISLSDLHLN- 460
Query: 497 INELVRAL-PTSYTGFVESNRF 517
N+L L PTS+ F + +R
Sbjct: 461 -NKLQSGLFPTSFQRFDQHSRI 481
>gi|224113039|ref|XP_002316370.1| predicted protein [Populus trichocarpa]
gi|222865410|gb|EEF02541.1| predicted protein [Populus trichocarpa]
Length = 669
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 156/402 (38%), Positives = 212/402 (52%), Gaps = 39/402 (9%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAG + +P + V YFPQGH E S F ++P I CKV ++
Sbjct: 11 QLWHACAGSMVQMPAVNSKVFYFPQGHAEHAQGSVEFGHFQIPAL-----IPCKVSAIKY 65
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
+A+ E DEVY ++ L+P + L L ED G S K P F KTLT S
Sbjct: 66 MADPETDEVYAKIRLIPLNNSD-LMLGHGCGEDNDDRLHSGNESQEK--PASFAKTLTQS 122
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + GGFSVPR AE FP LDY + P Q ++AKD+HG W+FRHIYRG PRRHLLTT
Sbjct: 123 DANNGGGFSVPRYCAETIFPRLDYTAEPPVQTILAKDVHGETWKFRHIYRGTPRRHLLTT 182
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNG------------------LP 281
GWS FV+QK LV+GD+++FLR ++G+L +GIRR+ + G
Sbjct: 183 GWSNFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGGNECSSGWNSFAGYSGFFRED 242
Query: 282 DSILSKQNSYPNVLSVV--------ANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIM 333
+S L ++N ++ V A+ + F Y PRA+ +F + I
Sbjct: 243 ESKLMRRNGNGDMKGKVKAESVIEAASLAANGQPFEAVYYPRASTPEFCVKASAVRSAIQ 302
Query: 334 NPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQ 392
C G RFKM FE +DS G ++ + DP RWPNS WR L V WDE +
Sbjct: 303 IQWCPGMRFKMAFETEDSSRISWFMGTISSVQVADPIRWPNSPWRLLQVAWDEPDLLHNV 362
Query: 393 EQVSPWEIDRSVSLPPLSIQS-SPRMKKLRTGLQAPPPDYPV 433
++VSPW ++ ++P + + SP KKLR PPD+P+
Sbjct: 363 KRVSPWLVELVSNMPAIHLSPFSPPRKKLRL---PQPPDFPL 401
>gi|18417527|ref|NP_567841.1| auxin response factor 16 [Arabidopsis thaliana]
gi|46576629|sp|Q93YR9.1|ARFP_ARATH RecName: Full=Auxin response factor 16
gi|16604695|gb|AAL24140.1| putative transcription factor [Arabidopsis thaliana]
gi|20259589|gb|AAM14137.1| putative transcription factor [Arabidopsis thaliana]
gi|332660318|gb|AEE85718.1| auxin response factor 16 [Arabidopsis thaliana]
Length = 670
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 154/410 (37%), Positives = 224/410 (54%), Gaps = 55/410 (13%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAG + +P + V YFPQGH E +A+ ++ N + P + C+V+ ++
Sbjct: 19 QLWHACAGGMVRMPPMNSKVFYFPQGHAE-----NAYDCVDFGNLPIPPMVLCRVLAIKY 73
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
+A+ E+DEV+ ++ L+P + E ++ E ED G S ++ TP F KTLT S
Sbjct: 74 MADAESDEVFAKLRLIPLKDDEYVDHEYGDGED-----SNGFESNSEKTPS-FAKTLTQS 127
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + GGFSVPR AE FP LDY + P Q ++AKD+HG W+FRHIYRG PRRHLLTT
Sbjct: 128 DANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTPRRHLLTT 187
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPD----------------- 282
GWS FV+QK LV+GD+++F+R ++G+L +GIRR+ R G+ +
Sbjct: 188 GWSNFVNQKKLVAGDSIVFMRAENGDLCVGIRRA--KRGGIGNGPEYSAGWNPIGGSCGY 245
Query: 283 -SILSKQNS------------------YPNVLSVVANAVSTKSMFHVFYSPRATHADFVI 323
S+L + S +V+ A+S + F V Y PRA+ ++F +
Sbjct: 246 SSLLREDESNSLRRSNCSLADRKGKVTAESVIEAATLAISGRP-FEVVYYPRASTSEFCV 304
Query: 324 PYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMVR 382
+ P C G RFKM FE +DS G V+ + DP RWPNS WR L V
Sbjct: 305 KALDARAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVNVSDPIRWPNSPWRLLQVA 364
Query: 383 WDECIGSDHQEQVSPWEIDRSVSLPPLSIQS-SPRMKKLRTGLQAPPPDY 431
WDE + ++V+PW ++ ++ P+ + S SP KK+R PDY
Sbjct: 365 WDEPDLLQNVKRVNPWLVELVSNVHPIPLTSFSPPRKKMRLPQH---PDY 411
Score = 40.4 bits (93), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 41/87 (47%), Gaps = 4/87 (4%)
Query: 683 KVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVG 742
KV + VGR +DL L Y +L +L +F ++ +LY D+ + G
Sbjct: 588 KVFMESDDVGRTLDLSVLGSYEELSRKLSDMFG----IKKSEMLSSVLYRDASGAIKYAG 643
Query: 743 DDPWHEFCNEVSKIHIYTQEEVEKMTI 769
++P+ EF ++ I T++ E + +
Sbjct: 644 NEPFSEFLKTARRLTILTEQGSESVVV 670
>gi|4938484|emb|CAB43843.1| transcription factor-like protein [Arabidopsis thaliana]
gi|7269908|emb|CAB81001.1| transcription factor-like protein [Arabidopsis thaliana]
Length = 653
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 154/410 (37%), Positives = 224/410 (54%), Gaps = 55/410 (13%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAG + +P + V YFPQGH E +A+ ++ N + P + C+V+ ++
Sbjct: 19 QLWHACAGGMVRMPPMNSKVFYFPQGHAE-----NAYDCVDFGNLPIPPMVLCRVLAIKY 73
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
+A+ E+DEV+ ++ L+P + E ++ E ED G S ++ TP F KTLT S
Sbjct: 74 MADAESDEVFAKLRLIPLKDDEYVDHEYGDGED-----SNGFESNSEKTPS-FAKTLTQS 127
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + GGFSVPR AE FP LDY + P Q ++AKD+HG W+FRHIYRG PRRHLLTT
Sbjct: 128 DANNGGGFSVPRYCAETIFPRLDYNAEPPVQTILAKDVHGDVWKFRHIYRGTPRRHLLTT 187
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPD----------------- 282
GWS FV+QK LV+GD+++F+R ++G+L +GIRR+ R G+ +
Sbjct: 188 GWSNFVNQKKLVAGDSIVFMRAENGDLCVGIRRA--KRGGIGNGPEYSAGWNPIGGSCGY 245
Query: 283 -SILSKQNS------------------YPNVLSVVANAVSTKSMFHVFYSPRATHADFVI 323
S+L + S +V+ A+S + F V Y PRA+ ++F +
Sbjct: 246 SSLLREDESNSLRRSNCSLADRKGKVTAESVIEAATLAISGRP-FEVVYYPRASTSEFCV 304
Query: 324 PYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMVR 382
+ P C G RFKM FE +DS G V+ + DP RWPNS WR L V
Sbjct: 305 KALDARAAMRIPWCSGMRFKMAFETEDSSRISWFMGTVSAVNVSDPIRWPNSPWRLLQVA 364
Query: 383 WDECIGSDHQEQVSPWEIDRSVSLPPLSIQS-SPRMKKLRTGLQAPPPDY 431
WDE + ++V+PW ++ ++ P+ + S SP KK+R PDY
Sbjct: 365 WDEPDLLQNVKRVNPWLVELVSNVHPIPLTSFSPPRKKMRLPQH---PDY 411
>gi|297846686|ref|XP_002891224.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337066|gb|EFH67483.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 629
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 141/370 (38%), Positives = 203/370 (54%), Gaps = 32/370 (8%)
Query: 55 SSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLE-QVASSSAFPPIEVPNFDLQPQIFCK 113
S +Y +LW CAGPL +PK G V YFPQGH+E S S + + +
Sbjct: 23 SYMYEQLWKLCAGPLYDIPKVGEKVYYFPQGHIEILSLSLSLSLSLSLSLSLSLSLSLSR 82
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFC 173
V+ +QL K +DE Y ++ L+P ++ ++ P+ ++ F
Sbjct: 83 VIAIQLKVEKNSDETYAEITLMPYTTQVVIH-----------NQNDNHYRPSVNS---FT 128
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
K LTASDTS HGGFSVPR+ A +C PPL+ + P+QEL+ DL G +WRF+H YRG P
Sbjct: 129 KVLTASDTSAHGGFSVPRKHAIECLPPLNMSEPLPAQELLTTDLQGNQWRFKHSYRGTPP 188
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
RHL+TTGW+ F + K LV+GD ++FLRG+ GELR+GIRR+ + P S++S +
Sbjct: 189 RHLITTGWNAFTTSKKLVAGDVIVFLRGECGELRVGIRRAGHQQGNRPSSLISIDSMGHG 248
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
V++ +A + MF V P + F++ Y K++ + +G+RF MRFE DD E
Sbjct: 249 VIASAVHAFDNQCMFIVVCKPSIRSSQFIVSYDKFLDAVNKKFNVGSRFTMRFEGDDLSE 308
Query: 354 RRCNGVVTGITDLDPYRWPNSKWR-------------CLMVRWDECIGSDHQEQVSPWEI 400
RR +G + G+ D P+ W S+WR L V+WDE ++VSPWEI
Sbjct: 309 RRYSGTIIGVKDFSPH-WIESEWRSLEVKFSFTLYNIILRVKWDEFASFPRPDKVSPWEI 367
Query: 401 DRSVSLPPLS 410
+ L PLS
Sbjct: 368 EH---LTPLS 374
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 70/108 (64%), Gaps = 1/108 (0%)
Query: 660 FGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGL 719
G +LTS S Q RSCTKV +G VGRA+DL LNGY+ L+ ELE LF++ G
Sbjct: 513 LGQTLTSAREIQSKQLSSTRSCTKVQMEGVTVGRALDLSVLNGYDQLILELEKLFDLNGQ 572
Query: 720 LRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
L+ + W I + D+E D M VGDDPW EFCN V +I IYT+E+V+ +
Sbjct: 573 LQTRNQ-WEISFIDNEGDKMFVGDDPWPEFCNMVKRIIIYTKEKVKNL 619
>gi|297741605|emb|CBI32737.3| unnamed protein product [Vitis vinifera]
Length = 580
Score = 259 bits (662), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 163/435 (37%), Positives = 234/435 (53%), Gaps = 36/435 (8%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQ-IFCKVVDVQ 118
+LWHACAG + +P + V YFPQGH E +S ++ N+ P I C+V ++
Sbjct: 21 QLWHACAGGMVQMPPVNSKVFYFPQGHAEHACAS-----VDFRNYPRIPAYIPCRVSAMK 75
Query: 119 LLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTA 178
+A+ E+DEVY ++ L+P LN +D G G + ++ P F KTLT
Sbjct: 76 FMADPESDEVYAKITLVP------LNGSESDYDDDGY----GNGTESQEKPASFAKTLTQ 125
Query: 179 SDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLT 238
SD + GGFSVPR AE FP LDY P Q ++AKD+HG W+FRHIYRG PRRHLLT
Sbjct: 126 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQNILAKDVHGETWKFRHIYRGTPRRHLLT 185
Query: 239 TGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSK-QNSYPNVLSV 297
TGWS FV+ K L++GD+++FLR ++G+L +GIRR+ + S + + + V+
Sbjct: 186 TGWSTFVNHKKLIAGDSIVFLRAENGDLCVGIRRAKRGIGCSNGSFFGRVKVTAEAVIEA 245
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRC 356
V AV+ + F V Y PRA+ +F + C G RFKM FE +DS
Sbjct: 246 VRLAVNGQP-FEVIYYPRASTPEFCVKSSLVKSASQIRWCSGMRFKMAFETEDSSRISWF 304
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSI-QSSP 415
G ++ + DP RWP+S WR L V WDE + ++VSPW ++ ++P + + SP
Sbjct: 305 MGTISSVQVADPVRWPDSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPSIHLTHFSP 364
Query: 416 RMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHPL 475
KKLR PD+P+ A+ F SS + VG +P +GC + N P
Sbjct: 365 PRKKLRFPQY---PDFPLDAQ------FSMPTFSSNL------VGPSNP-FGCLSDNIPA 408
Query: 476 GFEMRAPAHQSLALN 490
G + A L+L+
Sbjct: 409 GMQGARHAQYGLSLS 423
Score = 43.5 bits (101), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 85/213 (39%), Gaps = 26/213 (12%)
Query: 564 YPPPSESLSNMFFP-YGDMPKTVQHHTMPPYASNLQRENVKLNSSSIQMPAIGAEIRKAN 622
+ PP + L FP Y D P Q +MP ++SNL + S +PA R A
Sbjct: 362 FSPPRKKLR---FPQYPDFPLDAQF-SMPTFSSNLVGPSNPFGCLSDNIPAGMQGARHAQ 417
Query: 623 L-LNEHKPVEN------IPTPTFKANMRSHKDGSFNGTAAGCKLFGFSLTSETPTPSSQS 675
L+ P N P P + + + + N + + GF+L + Q+
Sbjct: 418 YGLSLSDPHHNKFQSGLFPAPFPQLDHPATPPKASNDYKSDDRKTGFTLFEHSSCEGYQT 477
Query: 676 PG----------KRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK 725
+ KV + VGR +DL L Y++L +L +F +E D
Sbjct: 478 YKVNHRETEPNLETGHCKVFMESEDVGRTLDLSLLTSYDELCGKLAKMFTIE----DSEM 533
Query: 726 GWRILYTDSENDVMVVGDDPWHEFCNEVSKIHI 758
+LY D+ V +GD+P+ +F ++ I
Sbjct: 534 RNHVLYRDATGAVKHIGDEPFSDFTKTAKRLTI 566
>gi|302790307|ref|XP_002976921.1| hypothetical protein SELMODRAFT_443304 [Selaginella moellendorffii]
gi|300155399|gb|EFJ22031.1| hypothetical protein SELMODRAFT_443304 [Selaginella moellendorffii]
Length = 752
Score = 259 bits (662), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 167/445 (37%), Positives = 217/445 (48%), Gaps = 87/445 (19%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LW ACAG + LP G+ ++YFPQGH EQ ASS FP P + C+V+ V+
Sbjct: 41 QLWQACAGSMVQLPTVGSKIIYFPQGHAEQAASSPDFPRALGP----AGTVPCRVLSVKF 96
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
LA+KE DEV+ + L P+ + N A L SP+ P F KTLT S
Sbjct: 97 LADKETDEVFASLRLHPESGSDEDNDRAAAL------------SPSPEKPASFAKTLTQS 144
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + GGFSVPR AE FP LDY P Q ++AKD+HG W+FRHIYRG PRRHLLTT
Sbjct: 145 DANNGGGFSVPRYCAETIFPRLDYSVDPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTT 204
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQP----------------------- 276
GWS FV+ K LV+GDA++FLR GEL +G+RRS++
Sbjct: 205 GWSTFVNHKKLVAGDAIVFLRSNSGELCVGVRRSMRGGGSGNADALLWHSASSRSSSRWE 264
Query: 277 -----RNGLPDSILSKQN------------------------SYPNVLSVVANAVSTKSM 307
GL D L +N + +VL A S K+
Sbjct: 265 LRPPMDTGLSDGTLMGENGSSRSAGGGGGNGGGSFTRNRAKVTAKSVLDAATLAASGKA- 323
Query: 308 FHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDL 366
F V Y PRA+ A+F + Q + + G RFKM FE +DS G ++ +
Sbjct: 324 FEVVYYPRASTAEFCVRAQTVRAALSHGWYAGMRFKMAFETEDSSRISWFMGTISAVQAA 383
Query: 367 DPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRS----VSLPPLSIQSSPRMKKLRT 422
DP WP+S WR L V WDE +VSPW+++ + LPP S+ PR KK R
Sbjct: 384 DPILWPSSPWRVLQVAWDEPDLLQGVSRVSPWQVELVSTLPMQLPPFSL---PR-KKFR- 438
Query: 423 GLQAPPPD------YPVSARGGGVL 441
Q P P+ P + GVL
Sbjct: 439 --QTPAPEGQSFSGLPTTTFANGVL 461
>gi|379323246|gb|AFD01322.1| auxin response factor 27 [Brassica rapa subsp. pekinensis]
Length = 541
Score = 259 bits (661), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 141/381 (37%), Positives = 215/381 (56%), Gaps = 25/381 (6%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEV-PNFDLQPQIFCKVV 115
+Y +LW CAGPL LPK G V YFPQG++EQ+ +S+ ++ P FD+ +I C V+
Sbjct: 23 LYDQLWKLCAGPLFDLPKIGEEVYYFPQGNIEQLVASANDNLCQLKPIFDISSRIHCNVI 82
Query: 116 DVQLLANKENDEVYTQVALLP-QPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
++L DEVY +V+LLP PE+E +++ F K
Sbjct: 83 SIKLKVETNTDEVYAKVSLLPCSPEVEITFPNDNNEQNIK----------------YFTK 126
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
LTASD HG F + ++ A +C PPLD Q PSQE+VAKDLH W+F+H +RG P+R
Sbjct: 127 VLTASDIGPHGDFILFKKDAIECLPPLDMSQLIPSQEIVAKDLHDHVWKFKHTFRGTPKR 186
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HL T+GW FV K+L GD+ +FLRG++GE R+GIR++ ++ + S++SK++ +
Sbjct: 187 HLFTSGWKEFVKGKSLAVGDSFVFLRGENGESRVGIRKTSHQQSDMSSSVISKESMHHGF 246
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
++ +NA+ TK MF VFY P++ + F++ K++ + +RF M+FE D E
Sbjct: 247 IASASNAIHTKCMFDVFYKPKS--SKFIVNCDKFLDAVNMKFNTSSRFTMKFEGHDFNEI 304
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID---RSVSLPPLSI 411
+G + + D Y W S+WR L V+WDE +VS WEI+ S ++ I
Sbjct: 305 IYSGTIVKMEDFSIY-WKGSEWRNLQVQWDEAATIPRPNKVSLWEIEPLIPSSNILKSVI 363
Query: 412 QSSPRMKKLRT-GLQAPPPDY 431
Q++ R +++ G PDY
Sbjct: 364 QNNKRQREINEFGPIISKPDY 384
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 60/96 (62%), Gaps = 3/96 (3%)
Query: 663 SLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRD 722
++TS T + S TKVH +G V R +DL +GYN ++ ELE LFN+EG L
Sbjct: 446 AVTSLTEIQRKELSFTTSSTKVHMEG--VTRTVDLTVFDGYNHMIVELEKLFNIEGKLHM 503
Query: 723 PAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHI 758
++ W++ + D E D+M+VGDDPW +FCN V +I I
Sbjct: 504 HSQ-WKLTFKDHEGDMMLVGDDPWPKFCNIVKEIVI 538
>gi|224097892|ref|XP_002311089.1| predicted protein [Populus trichocarpa]
gi|222850909|gb|EEE88456.1| predicted protein [Populus trichocarpa]
Length = 671
Score = 259 bits (661), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 153/407 (37%), Positives = 212/407 (52%), Gaps = 48/407 (11%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAG + +P + V YFPQGH E S F ++P I CKV ++
Sbjct: 11 QLWHACAGSMVQMPAVNSKVFYFPQGHAEHAQGSVDFGHFQIPAL-----IPCKVSAIKY 65
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSP----TKSTPHMFCKT 175
+A E DEVY ++ L P + + + G E+ R P ++ P F KT
Sbjct: 66 MAEPETDEVYAKIRLTPSSNSDLMFGD-------GCGEDSDDRLPNGIESQEKPASFAKT 118
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
LT SD + GGFSVPR AE FP LDY + P Q ++AKD+HG W+FRHIYRG PRRH
Sbjct: 119 LTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTILAKDVHGETWKFRHIYRGTPRRH 178
Query: 236 LLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNG---------------- 279
LLTTGWS FV+QK LV+GD+++FLR ++G+L +GIRR+ + G
Sbjct: 179 LLTTGWSNFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGGGNECSSGWNSFGGYSG 238
Query: 280 ---LPDSILSKQNS--------YPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKY 328
+S L+++N P + A+ + F V Y PRA+ +F +
Sbjct: 239 FLREDESKLTRRNGNGDMKGKVKPESVIEAASLAANGQPFEVVYYPRASTPEFCVRASAV 298
Query: 329 VKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECI 387
+ C G RFKM FE +DS G ++ + DP RWPNS WR L V WDE
Sbjct: 299 RTAMHIQWCPGMRFKMAFETEDSSRISWFMGTISSVQFADPIRWPNSPWRLLQVAWDEPD 358
Query: 388 GSDHQEQVSPWEIDRSVSLPPLSIQS-SPRMKKLRTGLQAPPPDYPV 433
+ ++VSPW + ++P + + SP KKLR PPD+P+
Sbjct: 359 LLQNVKRVSPWLAELVSNMPAIHLSPFSPPRKKLRL---PQPPDFPL 402
>gi|302797807|ref|XP_002980664.1| hypothetical protein SELMODRAFT_444549 [Selaginella moellendorffii]
gi|300151670|gb|EFJ18315.1| hypothetical protein SELMODRAFT_444549 [Selaginella moellendorffii]
Length = 793
Score = 258 bits (660), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 162/428 (37%), Positives = 214/428 (50%), Gaps = 81/428 (18%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LW ACAG + LP G+ ++YFPQGH EQ ASS FP P + C+V+ V+
Sbjct: 41 QLWQACAGSMVQLPTVGSKIIYFPQGHAEQAASSPDFPRALGP----AGTVPCRVLSVKF 96
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
LA+KE DEV+ + L P E+ ED ++ SP+ P F KTLT S
Sbjct: 97 LADKETDEVFASLRLHP---------ESGSDED---NDRAAAPSPSPEKPASFAKTLTQS 144
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + GGFSVPR AE FP LDY P Q ++AKD+HG W+FRHIYRG PRRHLLTT
Sbjct: 145 DANNGGGFSVPRYCAETIFPRLDYSVDPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTT 204
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQP----------------------- 276
GWS FV+ K LV+GDA++FLR GEL +G+RRS++
Sbjct: 205 GWSTFVNHKKLVAGDAIVFLRSNSGELCVGVRRSMRGGGSGNADALLWHSASSRSSSRWE 264
Query: 277 -----RNGLPDSILSKQN------------------------SYPNVLSVVANAVSTKSM 307
GL D L ++N + +VL A S K+
Sbjct: 265 LRPPMDTGLSDGTLMRENGSSRSAGGGAGNGGGSFTRNRAKVTAKSVLDAATLAASGKA- 323
Query: 308 FHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDL 366
F V Y PRA+ A+F + Q + + G RFKM FE +DS G ++ +
Sbjct: 324 FEVVYYPRASTAEFCVRAQTVRAALSHGWYAGMRFKMAFETEDSSRISWFMGTISAVQAA 383
Query: 367 DPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRS----VSLPPLSIQSSPRMKKLRT 422
DP WP+S WR L V WDE +VSPW+++ + LPP S+ PR K+ R
Sbjct: 384 DPILWPSSPWRVLQVAWDEPDLLQGVSRVSPWQVELVSTLPMQLPPFSL---PR-KRFR- 438
Query: 423 GLQAPPPD 430
Q P P+
Sbjct: 439 --QTPAPE 444
>gi|449456014|ref|XP_004145745.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
gi|449531181|ref|XP_004172566.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
Length = 716
Score = 258 bits (660), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 155/426 (36%), Positives = 211/426 (49%), Gaps = 67/426 (15%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAG + +P + V YFPQGH E ++ F + + P I C+V+ V+
Sbjct: 11 QLWHACAGGMVQMPAINSKVFYFPQGHAEHAQATVDF----TSSLRIPPLIPCRVLAVKF 66
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGG----GRSPTKSTPHMFCKT 175
LA+ E DEV+ V ++P P DL +EEGG G P F KT
Sbjct: 67 LADLETDEVFANVRMVPLPN-----------SDLNFEEEGGFGSSGSENNMEKPASFAKT 115
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
LT SD + GGFSVPR AE FP LDY P Q ++AKD+HG W+FRHIYRG PRRH
Sbjct: 116 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVIAKDVHGEVWKFRHIYRGTPRRH 175
Query: 236 LLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRS---------------------V 274
LLTTGWS FV+QK LV+GD+++FLR K+G+L +GIRR+ +
Sbjct: 176 LLTTGWSTFVNQKKLVAGDSIVFLRSKNGDLCVGIRRAKRAIGCASDHPYGWNPGGGNCI 235
Query: 275 QPRNGLPDSILSKQNSY----------------------PNVLSVVANAVSTKSMFHVFY 312
P GL + N P + A ++ F V Y
Sbjct: 236 PPYGGLTMFLRDDDNKLSRKGSLSSSGSGGNLRGKGKVRPESVMEAAALAASGQPFEVVY 295
Query: 313 SPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRW 371
PRA+ +F + + C G RFKM FE +DS G ++ + DP RW
Sbjct: 296 YPRASTPEFCVKASSVRAAMRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPIRW 355
Query: 372 PNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS-SPRMKKLRTGLQAPPPD 430
PNS WR L V WDE + ++VSPW ++ ++P + + SP KK R PD
Sbjct: 356 PNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPVIQLSPFSPPRKKFRLPQH---PD 412
Query: 431 YPVSAR 436
+P+ ++
Sbjct: 413 FPLDSQ 418
Score = 43.1 bits (100), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 43/95 (45%), Gaps = 4/95 (4%)
Query: 683 KVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVG 742
KV + VGR ++L ++ Y +L L ++F ME P +LY D+ V G
Sbjct: 608 KVFMESEDVGRTLNLSVISSYEELYRRLANMFGME----KPDILSHVLYQDATGAVKQAG 663
Query: 743 DDPWHEFCNEVSKIHIYTQEEVEKMTIGTTDDTQS 777
D P+ +F ++ I T +K+ D +S
Sbjct: 664 DKPFSDFIKTARRLTILTDSGSDKLGRTLMDGMRS 698
>gi|379323220|gb|AFD01309.1| auxin response factor 10 [Brassica rapa subsp. pekinensis]
Length = 705
Score = 258 bits (658), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 153/417 (36%), Positives = 208/417 (49%), Gaps = 57/417 (13%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAG + +P + V YFPQGH E + F VP P I C+V V+
Sbjct: 10 QLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAPPDFHAPRVP-----PLILCRVASVKF 64
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
LA+ E DEVY+++ LLP P + L+LE + L + G P F KTLT S
Sbjct: 65 LADSETDEVYSKITLLPLPGND-LDLENDAVLGLTPSPDVNG----NEKPASFAKTLTQS 119
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + GGFSVPR AE FP LDY + P Q ++AKD+HG W+FRHIYRG PRRHLLTT
Sbjct: 120 DANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLLTT 179
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQ---------------PRNGLPDSI 284
GWS FV+QK L++GD+++FLR + G+L +GIRR+ + P G +
Sbjct: 180 GWSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSNNPYPGFSGFL 239
Query: 285 LSKQNSYPNVLSVVANAVS----------------------------TKSMFHVFYSPRA 316
+ + ++ + NA F V Y PRA
Sbjct: 240 RDDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAFEVVYYPRA 299
Query: 317 THADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSK 375
+ +F + + C G RFKM FE +DS G V+ + DP RWPNS
Sbjct: 300 STPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSP 359
Query: 376 WRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYP 432
WR L V WDE + ++VSPW ++ ++P + + KKLR P D+P
Sbjct: 360 WRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPAIHLSPFSPRKKLRI---PQPFDFP 413
>gi|409924914|gb|AFV47363.1| auxin response factor 10 [Brassica rapa subsp. rapa]
Length = 705
Score = 257 bits (657), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 153/417 (36%), Positives = 208/417 (49%), Gaps = 57/417 (13%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAG + +P + V YFPQGH E + F VP P I C+V V+
Sbjct: 10 QLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAPPDFHAPRVP-----PLILCRVASVKF 64
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
LA+ E DEVY+++ LLP P + L+LE + L + G P F KTLT S
Sbjct: 65 LADSETDEVYSKITLLPLPGND-LDLENDAVLGLTPSPDVNG----NEKPASFAKTLTQS 119
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + GGFSVPR AE FP LDY + P Q ++AKD+HG W+FRHIYRG PRRHLLTT
Sbjct: 120 DANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLLTT 179
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQ---------------PRNGLPDSI 284
GWS FV+QK L++GD+++FLR + G+L +GIRR+ + P G +
Sbjct: 180 GWSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSNNPYPGFSGFL 239
Query: 285 LSKQNSYPNVLSVVANAVS----------------------------TKSMFHVFYSPRA 316
+ + ++ + NA F V Y PRA
Sbjct: 240 RDDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAFEVVYYPRA 299
Query: 317 THADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSK 375
+ +F + + C G RFKM FE +DS G V+ + DP RWPNS
Sbjct: 300 STPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSP 359
Query: 376 WRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYP 432
WR L V WDE + ++VSPW ++ ++P + + KKLR P D+P
Sbjct: 360 WRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPAIHLSPFSPRKKLRI---PQPFDFP 413
>gi|6165644|gb|AAF04627.1|AF099735_1 auxin response factor 10 [Arabidopsis thaliana]
Length = 701
Score = 257 bits (656), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 155/408 (37%), Positives = 204/408 (50%), Gaps = 61/408 (14%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAG + +P + V YF QGH E + F VP P I C+VV V+
Sbjct: 10 QLWHACAGSMVQIPSLNSTVFYFAQGHTEHAHAPPDFHAPRVP-----PLILCRVVSVKF 64
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGV-----DEEGGGRSPTKSTPHMFCK 174
LA+ E DEV+ ++ LLP P G +L+ + LG+ D G G K P F K
Sbjct: 65 LADAETDEVFAKITLLPLP---GNDLDLENDAVLGLTPPSSDGNGNG----KEKPASFAK 117
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLT SD + GGFSVPR AE FP LDY + P Q + AKD+HG W+FRHIYRG PRR
Sbjct: 118 TLTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVNAKDIHGETWKFRHIYRGTPRR 177
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS FV+QK L++GD+++FLR + G+L +GIRR+ R GL S N YP
Sbjct: 178 HLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRA--KRGGL-GSNAGSDNPYPGF 234
Query: 295 LSVV----------------------ANAVSTKSM------------------FHVFYSP 314
+ NA +T + F V Y P
Sbjct: 235 SGFLRDDESTTTTSKLMMMKRNGNNDGNAAATGRVRVEAVAGSGGACSXVDKAFEVVYYP 294
Query: 315 RATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPN 373
RA+ +F + + C G R KM FE +DS G + + DP RWPN
Sbjct: 295 RASTPEFCVKAADVRSAMRXXWCXGMRXKMAFETEDSSRISWFMGTXSAVQVADPIRWPN 354
Query: 374 SKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLR 421
S WR L V WDE + ++VSPW + ++P + + KK+R
Sbjct: 355 SPWRLLQVAWDEPDLXQNVKRVSPWLVXLVSNMPTIHLSPFSXWKKIR 402
>gi|224104635|ref|XP_002313508.1| predicted protein [Populus trichocarpa]
gi|222849916|gb|EEE87463.1| predicted protein [Populus trichocarpa]
Length = 690
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 154/402 (38%), Positives = 205/402 (50%), Gaps = 54/402 (13%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LW ACAG + +P + V YFPQGH E S FP +P+ I C+V V+
Sbjct: 12 QLWQACAGSMVHIPPLNSTVFYFPQGHAEHSQSPVNFPQ-RIPSL-----ILCRVATVKF 65
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
LA+ + DEVY ++ +P P N + D G+ G P F KTLT S
Sbjct: 66 LADPDTDEVYAKIGFVPLP-----NTDLDFAHDRGLCGNGNDGDSCPDKPASFAKTLTQS 120
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + GGFSVPR AE FP LDY P Q ++AKD+HG W+FRHIYRG PRRHLLTT
Sbjct: 121 DANNGGGFSVPRYCAETIFPRLDYSSDPPLQTVIAKDVHGEVWKFRHIYRGTPRRHLLTT 180
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQ------------------------ 275
GWS FV+QK LV+GD+++FLR ++G+LR+GIRRS +
Sbjct: 181 GWSTFVNQKKLVAGDSIVFLRAENGDLRVGIRRSKRGIGIGSRPESSLTTGWNSNNATCA 240
Query: 276 -PRNGLPDSILSKQNSYPN-------------VLSVVANAVSTKSMFHVFYSPRATHADF 321
P +G S+ K++ N VL A + K F V Y PR++ +F
Sbjct: 241 IPYDGF--SLFVKEDEMRNGGMKGRGRVKPEEVLEAAGLAANGKP-FQVVYYPRSSTPEF 297
Query: 322 VIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLM 380
+ + C G RFKM FE +DS G VT + DP RWPNS WR L
Sbjct: 298 CVKASSVRAAMRIGWCSGMRFKMAFETEDSSRISWFMGTVTSVQVADPVRWPNSPWRLLQ 357
Query: 381 VRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS-SPRMKKLR 421
V WDE + ++VSPW ++ ++P + + SP KK R
Sbjct: 358 VAWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPPRKKSR 399
>gi|297826099|ref|XP_002880932.1| hypothetical protein ARALYDRAFT_481671 [Arabidopsis lyrata subsp.
lyrata]
gi|297326771|gb|EFH57191.1| hypothetical protein ARALYDRAFT_481671 [Arabidopsis lyrata subsp.
lyrata]
Length = 697
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 155/405 (38%), Positives = 209/405 (51%), Gaps = 55/405 (13%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAG + +P + V YF QGH E + F VP P I C+VV V+
Sbjct: 10 QLWHACAGSMVQIPSVNSTVFYFAQGHTEHAHAPPDFHAPRVP-----PLILCRVVSVKF 64
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDL-----GVDEEGGGRSPTKSTPHMFCK 174
LA+ E DEV+ ++ LLP P + L+LE + L V+ G G P F K
Sbjct: 65 LADAETDEVFAKITLLPLPGND-LDLENDAVLGLTPPSSDVNVNGNG----NEKPASFAK 119
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLT SD + GGFSVPR AE FP LDY + P Q ++AKD+HG W+FRHIYRG PRR
Sbjct: 120 TLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRR 179
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS FV+QK L++GD+++FLR + G+L +GIRR+ R GL + L N YP
Sbjct: 180 HLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRA--KRGGLGSTGLGSDNPYPGF 237
Query: 295 LSVVAN---AVSTKSM----------------------------------FHVFYSPRAT 317
+ + + ++K M F V Y PRA+
Sbjct: 238 SGFLRDDETSTTSKLMMMKRNGNDGNAAAGGRVRVEAVAEAVARAACGQAFEVVYYPRAS 297
Query: 318 HADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKW 376
+F + + C G RFKM FE +DS G V+ + DP RWPNS W
Sbjct: 298 TPEFCVKAADVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSPW 357
Query: 377 RCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLR 421
R L V WDE + ++VSPW ++ ++P + + KK+R
Sbjct: 358 RLLQVAWDEPDLLQNVKRVSPWLVELVSNMPAIHLSPFSPRKKIR 402
>gi|400269944|gb|AFP74909.1| auxin response factor 10 [Brassica napus]
Length = 704
Score = 256 bits (655), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 152/417 (36%), Positives = 207/417 (49%), Gaps = 57/417 (13%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAG + +P + V YFPQGH E + F VP P I C++ V+
Sbjct: 10 QLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAPPDFHAPRVP-----PLILCRLASVKF 64
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
LA+ E DEVY+++ LLP P L+LE + L + G P F KTLT S
Sbjct: 65 LADAETDEVYSKITLLPLPG-NDLDLENDAVLGLTPSPDVNG----NEKPASFAKTLTQS 119
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + GGFSVPR AE FP LDY + P Q ++AKD+HG W+FRHIYRG PRRHLLTT
Sbjct: 120 DANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGKTWKFRHIYRGTPRRHLLTT 179
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQ---------------PRNGLPDSI 284
GWS FV+QK L++GD+++FLR + G+L +GIRR+ + P G +
Sbjct: 180 GWSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSNNPYPGFSGFL 239
Query: 285 LSKQNSYPNVLSVVANAVS----------------------------TKSMFHVFYSPRA 316
+ + ++ + NA F V Y PRA
Sbjct: 240 RDDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAFEVVYYPRA 299
Query: 317 THADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSK 375
+ +F + + C G RFKM FE +DS G V+ + DP RWPNS
Sbjct: 300 STPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSP 359
Query: 376 WRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYP 432
WR L V WDE + ++VSPW ++ ++P + + KKLR P D+P
Sbjct: 360 WRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPAIHLSPFSPRKKLRI---PQPFDFP 413
>gi|350537209|ref|NP_001234796.1| auxin response factor 10 [Solanum lycopersicum]
gi|300676100|gb|ADK26472.1| auxin response factor 10 [Solanum lycopersicum]
Length = 699
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 157/414 (37%), Positives = 211/414 (50%), Gaps = 54/414 (13%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPI-EVPNFDLQPQIFCKVVDVQ 118
+LWHACAG + +P + V YFPQGH E + F + P I C+V V+
Sbjct: 12 QLWHACAGGMVQIPPVNSKVYYFPQGHAEHTLMNVDFSALPRSPAL-----ILCRVAAVK 66
Query: 119 LLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTA 178
LA+ E DEVY ++ ++P +G N + LG +E G T P+ F KTLT
Sbjct: 67 FLADPETDEVYAKIRVVPVGN-KG-NDFDDDDDILGSNESG-----TAEKPNSFAKTLTQ 119
Query: 179 SDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLT 238
SD + GGFSVPR AE FP LDY P Q + AKD+HG W+FRHIYRG PRRHLLT
Sbjct: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVTAKDVHGESWKFRHIYRGTPRRHLLT 179
Query: 239 TGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPD---------------- 282
TGWS FV+QK LV+GD+++FLR ++GEL +GIRR+ + G P+
Sbjct: 180 TGWSSFVNQKKLVAGDSIVFLRAENGELCVGIRRAKRGGIGGPEAPSGWNSGAGNYGGFS 239
Query: 283 ------------------SILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIP 324
S+ K P + A+ S+ F V Y PRA +F +
Sbjct: 240 AFLREEMSKNGNLTSPTRSLRGKGRVRPESVVEAAHLASSGQPFEVVYYPRANTPEFCVR 299
Query: 325 YQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMVRW 383
+ C G RFKM FE +DS G ++ I DP RWPNS WR L V W
Sbjct: 300 ASSVNAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSIQLADPIRWPNSPWRLLQVAW 359
Query: 384 DECIGSDHQEQVSPWEIDRSVSLPPLSIQS-SPRMKKLRTGLQAPPPDYPVSAR 436
DE + + VSPW ++ ++P + + SP KKLR PPD+ + ++
Sbjct: 360 DEPDLLQNVKHVSPWLVELVSNMPVIHLSPFSPPRKKLRL-----PPDFSLDSQ 408
Score = 42.7 bits (99), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 683 KVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVG 742
KV + VGR +DL + Y +L L ++F +E P R+LY D+ V G
Sbjct: 592 KVFLESEDVGRTLDLSVMGSYEELYKRLANMFGLE----RPDMLTRVLYHDATGAVKHTG 647
Query: 743 DDPWHEFCNEVSKIHI 758
D+P+ +F ++ I
Sbjct: 648 DEPFSDFVKSAKRLTI 663
>gi|409924912|gb|AFV47362.1| auxin response factor 10 [Brassica oleracea var. oleracea]
Length = 703
Score = 256 bits (655), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 155/416 (37%), Positives = 207/416 (49%), Gaps = 56/416 (13%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAG + +P + V YFPQGH E + F VP P I C+V V+
Sbjct: 10 QLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAPPDFHAPRVP-----PLILCRVASVKF 64
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
LA+ E DEVY+++ LLP P L+LE + L + G P F KTLT S
Sbjct: 65 LADAETDEVYSKITLLPLPG-NDLDLENDAVLGLTPSPDVNG----NEKPASFAKTLTQS 119
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + GGFSVPR AE FP LDY + P Q ++AKD+HG W+FRHIYRG PRRHLLTT
Sbjct: 120 DANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLLTT 179
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQ----PRNGLPDSILSKQNSYPNVL 295
GWS FV+QK L++GD+++FLR + G+L +GIRR+ + D+ + N YP
Sbjct: 180 GWSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGLGSDNNNNSNNPYPGFS 239
Query: 296 SVVANAVSTKS--------------------------------------MFHVFYSPRAT 317
+ + T S F V Y PRA+
Sbjct: 240 GFLRDDEITTSKLMMMKRNGGNVNDANAPGGRVRVEAVAEAVARAACGQAFEVVYYPRAS 299
Query: 318 HADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKW 376
+F + + C G RFKM FE +DS G V+ + DP RWPNS W
Sbjct: 300 TPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSPW 359
Query: 377 RCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYP 432
R L V WDE + ++VSPW ++ ++P + + KKLR P D+P
Sbjct: 360 RLLQVAWDEPDLLQNVKRVSPWLVELVSNMPAIHLSPFSPRKKLRI---PQPFDFP 412
>gi|297724575|ref|NP_001174651.1| Os06g0196700 [Oryza sativa Japonica Group]
gi|255676813|dbj|BAH93379.1| Os06g0196700 [Oryza sativa Japonica Group]
Length = 309
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 134/257 (52%), Positives = 177/257 (68%), Gaps = 11/257 (4%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNF-DLQPQIFCKVVDVQ 118
ELWHACAGPL SLP G++VVYFPQGH EQVA+S +P + L ++ CK++ +
Sbjct: 24 ELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMHKELDNIPGYPSLPSKLICKLLSLT 83
Query: 119 LLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTA 178
L A+ E DEVY Q+ L P + + +A +LG+ + K FCKTLTA
Sbjct: 84 LHADSETDEVYAQMTLQP---VNKYDRDAMLASELGLKQ-------NKQPAEFFCKTLTA 133
Query: 179 SDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLT 238
SDTSTHGGFSVPRRAAE FPPLD+ Q P+QEL+AKDLH + W+FRHIYRGQP+RHLLT
Sbjct: 134 SDTSTHGGFSVPRRAAEKIFPPLDFTMQPPAQELIAKDLHDISWKFRHIYRGQPKRHLLT 193
Query: 239 TGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVV 298
TGWS+FVS K L++GD+VLF+R + +L LGIRR+ +P+ L S+LS + + +L+
Sbjct: 194 TGWSVFVSTKRLLAGDSVLFIRDEKSQLLLGIRRATRPQPALSSSVLSSDSMHIGILAAA 253
Query: 299 ANAVSTKSMFHVFYSPR 315
A+A + S F +FY+PR
Sbjct: 254 AHAAANSSPFTIFYNPR 270
>gi|356537563|ref|XP_003537296.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 700
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 171/489 (34%), Positives = 235/489 (48%), Gaps = 76/489 (15%)
Query: 50 SSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPI-EVPNFDLQP 108
S + S + +LWHACAG + +P + V YFPQGH E F +VP F
Sbjct: 11 SKEVESCLDPQLWHACAGGIVQMPAVNSKVYYFPQGHAEHACGPVNFRTCPKVPPF---- 66
Query: 109 QIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKST 168
+ C+V V+ A+ E DEVY ++ L+P LN D+ D + G + T+
Sbjct: 67 -VPCRVTAVKYRADPETDEVYAKLKLIP------LNAN-----DVDYDRDVVGGAETQDK 114
Query: 169 PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIY 228
P F KTLT SD + GGFSVPR AE FP LDY P Q ++AKD+HG W+FRHIY
Sbjct: 115 PASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYSVDPPVQNILAKDVHGETWKFRHIY 174
Query: 229 RGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQ------------- 275
RG PRRHLLTTGWS FV+ K LV+GD+++FLR ++G+L +GIRR+ +
Sbjct: 175 RGTPRRHLLTTGWSTFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKKGICGGLETSSGWN 234
Query: 276 ------------------------PRNGLPD------SILSKQNSYPNVLSVVANAVSTK 305
RNG + S++ K P +S +N + K
Sbjct: 235 PAGGNCHIPYGGFSPFFREDDNRISRNGNSNGLNPSVSMMGKGKVRPEAVSEASNLAANK 294
Query: 306 SMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGIT 364
F V Y PRA+ +F + + C G RFKM FE +DS G ++
Sbjct: 295 KPFEVVYYPRASTPEFCVKASLVEAALQIRWCSGIRFKMAFETEDSSRISWFMGTISSAQ 354
Query: 365 DLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS-SPRMKKLRTG 423
DP WPNS WR L V WDE + +VSPW ++ ++P + SP KKLR
Sbjct: 355 VADPLNWPNSPWRLLQVTWDEPDLLQNVRRVSPWLVELVSNMPAIHFSPFSPPRKKLRLP 414
Query: 424 LQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHPLGFEMRAPA 483
Q PD+P+ + S S +L G N +GC + P G + A
Sbjct: 415 QQ---PDFPLDGQ------IPLSTFPSNLL-GPSNTN----QFGCLLESTPAGMQGARHA 460
Query: 484 HQSLALNGI 492
H L+L+ +
Sbjct: 461 HYGLSLSDL 469
>gi|400269967|gb|AFP74918.1| auxin response factor 10 [Brassica napus]
Length = 706
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 152/417 (36%), Positives = 207/417 (49%), Gaps = 57/417 (13%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAG + +P + V YFPQGH E + F VP P I C++ V+
Sbjct: 10 QLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAPPDFHAPRVP-----PLILCRLASVKF 64
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
LA+ E DEVY+++ LLP P L+LE + L + G P F KTLT S
Sbjct: 65 LADAETDEVYSKITLLPLPG-NDLDLENDAVLGLTPSPDVNG----NEKPASFAKTLTQS 119
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + GGFSVPR AE FP LDY + P Q ++AKD+HG W+FRHIYRG PRRHLLTT
Sbjct: 120 DANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGKTWKFRHIYRGTPRRHLLTT 179
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQ---------------PRNGLPDSI 284
GWS FV+QK L++GD+++FLR + G+L +GIRR+ + P G +
Sbjct: 180 GWSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSNNPYPGFSGFL 239
Query: 285 LSKQNSYPNVLSVVANAVS----------------------------TKSMFHVFYSPRA 316
+ + ++ + NA F V Y PRA
Sbjct: 240 RDDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAFEVVYYPRA 299
Query: 317 THADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSK 375
+ +F + + C G RFKM FE +DS G V+ + DP RWPNS
Sbjct: 300 STPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSP 359
Query: 376 WRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYP 432
WR L V WDE + ++VSPW ++ ++P + + KKLR P D+P
Sbjct: 360 WRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPAIHLSPFSPRKKLRI---PQPFDFP 413
>gi|400269965|gb|AFP74917.1| auxin response factor 10 [Brassica napus]
Length = 705
Score = 256 bits (654), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 152/417 (36%), Positives = 207/417 (49%), Gaps = 57/417 (13%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAG + +P + V YFPQGH E + F VP P I C++ V+
Sbjct: 10 QLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAPPDFHAPRVP-----PLILCRLASVKF 64
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
LA+ E DEVY+++ LLP P L+LE + L + G P F KTLT S
Sbjct: 65 LADAETDEVYSKITLLPLPG-NDLDLENDAVLGLTPSPDVNG----NEKPASFAKTLTQS 119
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + GGFSVPR AE FP LDY + P Q ++AKD+HG W+FRHIYRG PRRHLLTT
Sbjct: 120 DANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGKTWKFRHIYRGTPRRHLLTT 179
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQ---------------PRNGLPDSI 284
GWS FV+QK L++GD+++FLR + G+L +GIRR+ + P G +
Sbjct: 180 GWSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSNNPYPGFSGFL 239
Query: 285 LSKQNSYPNVLSVVANAVS----------------------------TKSMFHVFYSPRA 316
+ + ++ + NA F V Y PRA
Sbjct: 240 RDDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAFEVVYYPRA 299
Query: 317 THADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSK 375
+ +F + + C G RFKM FE +DS G V+ + DP RWPNS
Sbjct: 300 STPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSP 359
Query: 376 WRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYP 432
WR L V WDE + ++VSPW ++ ++P + + KKLR P D+P
Sbjct: 360 WRLLQVAWDEPDLLQNVKRVSPWLVELVSNMPAIHLSPFSPRKKLRI---PQPFDFP 413
>gi|79319169|ref|NP_001031139.1| auxin response factor 13 [Arabidopsis thaliana]
gi|50429007|gb|AAT77165.1| ARF13 [Arabidopsis thaliana]
gi|332193559|gb|AEE31680.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 479
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 143/372 (38%), Positives = 202/372 (54%), Gaps = 49/372 (13%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEV-PNFDLQPQIFCKVV 115
+Y +LW+ CAGPL LPK G V YFPQGH+E + +S+ + P FDL ++ C+VV
Sbjct: 22 MYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIFDLPSKLRCRVV 81
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKT 175
+ +K DEVY Q++L+P E + + R P + F K
Sbjct: 82 AIDRKVDKNTDEVYAQISLMPD-----------TTEVMTHNTTMDTRRPI---VYFFSKI 127
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
LTASD S GG +P++ A +CFPPLD Q +Q LVAKDL+G EW F+H++RG P+RH
Sbjct: 128 LTASDVSLSGGLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRH 187
Query: 236 LLTTG--WSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
+ T+G WS+F + K L+ GD + LRG++GELR GIRR+ + +P S++S
Sbjct: 188 MFTSGGGWSVFATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHG 247
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
V++ V NA TK MF+V Y PR M+FE D E
Sbjct: 248 VIASVVNAFKTKCMFNVVYKPR----------------------------MQFEGKDFSE 279
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS 413
+R +G + G+ D+ P+ W +S+WR L V+WDE QVSPW+I+ L P S S
Sbjct: 280 KRYDGTIIGVNDMSPH-WKDSEWRSLKVQWDELSPFLRPNQVSPWDIEH---LIPSSDIS 335
Query: 414 SPRMKKLRTGLQ 425
+KK + LQ
Sbjct: 336 QSSLKKKKHWLQ 347
>gi|337273025|gb|AEI70250.1| auxin response factor 10 [Solanum lycopersicum]
Length = 699
Score = 256 bits (653), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 157/414 (37%), Positives = 210/414 (50%), Gaps = 54/414 (13%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPI-EVPNFDLQPQIFCKVVDVQ 118
+LWHACAG + +P + V YFPQGH E + F + P I C+V V+
Sbjct: 12 QLWHACAGGMVQIPPVNSKVYYFPQGHAEHTLMNVDFSALPRSPAL-----ILCRVAAVK 66
Query: 119 LLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTA 178
LA+ E DEVY ++ ++P +G N + LG +E G T P+ F KTLT
Sbjct: 67 FLADPETDEVYAKIRVVPVGN-KG-NDFDDDDDILGSNESG-----TAEKPNSFAKTLTQ 119
Query: 179 SDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLT 238
SD + GGFSVPR AE FP LDY P Q + AKD+HG W+FRHIYRG PRRHLLT
Sbjct: 120 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVTAKDVHGETWKFRHIYRGTPRRHLLT 179
Query: 239 TGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPD---------------- 282
TGWS FV+QK LV+GD+++FLR ++GEL +GIRR+ + G P+
Sbjct: 180 TGWSSFVNQKKLVAGDSIVFLRAENGELCVGIRRAKRGGIGGPEAPSGWNSGAGNYGGFS 239
Query: 283 ------------------SILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIP 324
S+ K P + A S+ F V Y PRA +F +
Sbjct: 240 AFLREEMSKNGNLTSPTRSLRGKGRVRPESVVEAAYLASSGQPFEVVYYPRANTPEFCVR 299
Query: 325 YQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMVRW 383
+ C G RFKM FE +DS G ++ I DP RWPNS WR L V W
Sbjct: 300 ASSVNAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSIQLADPIRWPNSPWRLLQVAW 359
Query: 384 DECIGSDHQEQVSPWEIDRSVSLPPLSIQS-SPRMKKLRTGLQAPPPDYPVSAR 436
DE + + VSPW ++ ++P + + SP KKLR PPD+ + ++
Sbjct: 360 DEPDLLQNVKHVSPWLVELVSNMPVIHLSPFSPPRKKLRL-----PPDFSLDSQ 408
Score = 42.7 bits (99), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 4/76 (5%)
Query: 683 KVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVG 742
KV + VGR +DL + Y +L L ++F +E P R+LY D+ V G
Sbjct: 592 KVFLESEDVGRTLDLSVMGSYEELYKRLANMFGLE----RPDMLTRVLYHDATGAVKHTG 647
Query: 743 DDPWHEFCNEVSKIHI 758
D+P+ +F ++ I
Sbjct: 648 DEPFSDFVKSAKRLTI 663
>gi|168061548|ref|XP_001782750.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665783|gb|EDQ52456.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 595
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 160/387 (41%), Positives = 209/387 (54%), Gaps = 44/387 (11%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAG + LP+ G V+YFPQGH EQ A++ F P+ I C+VV V
Sbjct: 15 QLWHACAGGMVQLPQVGAKVIYFPQGHGEQAATTPDFSASMGPSG----TIPCRVVSVNF 70
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
LA+ E DEV+ ++ L P+ L GLN ++ SP P F KTLT S
Sbjct: 71 LADTETDEVFARMRLQPE-GLHGLNDMTEEAPS----------SPPPEKPASFAKTLTQS 119
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + GGFSVPR AE FPPLDY P Q ++AKD+HG W+FRHIYRG PRRHLLTT
Sbjct: 120 DANNGGGFSVPRYCAETIFPPLDYSSDPPVQTVLAKDVHGDVWKFRHIYRGTPRRHLLTT 179
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQ----------PRNGLPDSILSKQN 289
GWS FV+QK LV+GDA++FLR GEL +G+RRS++ NG+ S S+
Sbjct: 180 GWSTFVNQKKLVAGDAIVFLRSASGELCVGVRRSMRGAMGDNGHGGSSNGVSRSG-SQGA 238
Query: 290 SYPNVLSVVANAVSTKSM------------FHVFYSPRATHADFVIPYQKYVKIIMNPIC 337
S + + V+ KS+ F V Y PRA+ A+F + + + +
Sbjct: 239 STTSSFARNRARVTAKSVLDAAALAVAGKPFEVVYYPRASTAEFCVKAGLVKQALDHTWY 298
Query: 338 IGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVS 396
G RFKM FE +DS G + + DP WPNS WR V WDE +VS
Sbjct: 299 AGMRFKMAFETEDSSRISWFMGTIAAVKPADPLLWPNSPWR---VTWDEPDLLQGVSRVS 355
Query: 397 PWEIDRSVSLP-PLSIQSSPRMKKLRT 422
PW+++ +LP L S P+ KKLR
Sbjct: 356 PWQVELVATLPMQLPPFSYPK-KKLRA 381
Score = 43.5 bits (101), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 9/84 (10%)
Query: 677 GKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGW--RILYTDS 734
G C KV ++G VGR +DL Y ++ L +F++ PA + R++Y D
Sbjct: 517 GTEHC-KVFREGDEVGRTLDLANFKSYEEVYDRLAGMFSV------PAASFKNRVVYQDG 569
Query: 735 ENDVMVVGDDPWHEFCNEVSKIHI 758
E + VG +P+ F V ++ I
Sbjct: 570 EGCTLPVGAEPYGNFVAAVRRLTI 593
>gi|356542623|ref|XP_003539766.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 701
Score = 255 bits (652), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 158/428 (36%), Positives = 214/428 (50%), Gaps = 75/428 (17%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAG + +P+ + V YFPQGH E ++ + L P I C V V+
Sbjct: 11 QLWHACAGGMVQMPQMNSKVFYFPQGHAEHAHTNI--------HLRLPPFILCNVEAVKF 62
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKS-----TPHMFCK 174
+AN E DEV+ +++LLP E LG D +G G P F K
Sbjct: 63 MANPETDEVFAKLSLLPLRNSE-----------LGADSDGAGGDDVAEPSCCEKPASFAK 111
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
TLT SD + GGFSVPR AE FP LDY + P Q +VAKD+HG WRFRHIYRG PRR
Sbjct: 112 TLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVVAKDVHGETWRFRHIYRGTPRR 171
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQP------------------ 276
HLLTTGWS FV+QK LV+GD+V+FLR ++G+L +GIRR+ +
Sbjct: 172 HLLTTGWSSFVNQKKLVAGDSVVFLRAENGDLCVGIRRAKKGISEGSGSGSSSVWSSASG 231
Query: 277 -------------------------RNGLPDSILSK-QNSYPNVLSVVANAVSTKSMFHV 310
RNG ++ + + +V+ V A S K F V
Sbjct: 232 SGNGNCGIGPYGPFSFFLKEENKMLRNGCGGNLSGRVKVRAEDVVEAVTLAASNKP-FEV 290
Query: 311 FYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPY 369
Y PRA+ +F + + C G RFKM FE +D+ G + + +DP
Sbjct: 291 VYYPRASTPEFCVKASAVRAAMRIQWCSGMRFKMAFETEDASRISWFMGTIASVQVVDPI 350
Query: 370 RWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS-SPRMKKLRTGLQAPP 428
RWPNS WR L V WDE + ++VSPW ++ ++P ++ SP KKLR
Sbjct: 351 RWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNIPLINFTPFSPPRKKLR----PQH 406
Query: 429 PDYPVSAR 436
PD+P+ +
Sbjct: 407 PDFPLDVQ 414
>gi|238478721|ref|NP_001154393.1| auxin response factor 13 [Arabidopsis thaliana]
gi|332193560|gb|AEE31681.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 546
Score = 255 bits (651), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 143/372 (38%), Positives = 202/372 (54%), Gaps = 49/372 (13%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEV-PNFDLQPQIFCKVV 115
+Y +LW+ CAGPL LPK G V YFPQGH+E + +S+ + P FDL ++ C+VV
Sbjct: 22 MYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIFDLPSKLRCRVV 81
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKT 175
+ +K DEVY Q++L+P E + + R P + F K
Sbjct: 82 AIDRKVDKNTDEVYAQISLMPD-----------TTEVMTHNTTMDTRRPI---VYFFSKI 127
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
LTASD S GG +P++ A +CFPPLD Q +Q LVAKDL+G EW F+H++RG P+RH
Sbjct: 128 LTASDVSLSGGLIIPKQYAIECFPPLDMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRH 187
Query: 236 LLTTG--WSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
+ T+G WS+F + K L+ GD + LRG++GELR GIRR+ + +P S++S
Sbjct: 188 MFTSGGGWSVFATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHG 247
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
V++ V NA TK MF+V Y PR M+FE D E
Sbjct: 248 VIASVVNAFKTKCMFNVVYKPR----------------------------MQFEGKDFSE 279
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS 413
+R +G + G+ D+ P+ W +S+WR L V+WDE QVSPW+I+ L P S S
Sbjct: 280 KRYDGTIIGVNDMSPH-WKDSEWRSLKVQWDELSPFLRPNQVSPWDIEH---LIPSSDIS 335
Query: 414 SPRMKKLRTGLQ 425
+KK + LQ
Sbjct: 336 QSSLKKKKHWLQ 347
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 76/139 (54%), Gaps = 20/139 (14%)
Query: 633 IPTPTFKAN--MRSHKDGSFNGTAAGCKLFGFSLTSETPTPSSQSPGKRSCTKVHKQGSL 690
IP + ++ ++ K+ C LFG LT KVH QG
Sbjct: 402 IPNENYNSDQMIQPRKEDITTEATTSCLLFGVDLT-----------------KVHMQGVA 444
Query: 691 VGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFC 750
+ RA+DL ++GYN L+ +LE LF+++ LR + W I++T++E M+VGDDPW EFC
Sbjct: 445 ISRAVDLTAMHGYNQLIQKLEELFDLKDELRTRNQ-WEIVFTNNEGAEMLVGDDPWPEFC 503
Query: 751 NEVSKIHIYTQEEVEKMTI 769
N +I I ++EE++KM +
Sbjct: 504 NMAKRIFICSKEEIKKMKL 522
>gi|400269948|gb|AFP74910.1| auxin response factor 10 [Brassica napus]
gi|400269950|gb|AFP74911.1| auxin response factor 10 [Brassica napus]
gi|400269953|gb|AFP74912.1| auxin response factor 10 [Brassica napus]
gi|400269956|gb|AFP74913.1| auxin response factor 10 [Brassica napus]
gi|400269959|gb|AFP74914.1| auxin response factor 10 [Brassica napus]
Length = 703
Score = 255 bits (651), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 155/416 (37%), Positives = 206/416 (49%), Gaps = 56/416 (13%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LW ACAG + +P + V YFPQGH E + F VP P I C+V V+
Sbjct: 10 QLWQACAGSMVQIPSLNSTVFYFPQGHAEHAHAPPDFHAPRVP-----PLILCRVASVKF 64
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
LA+ E DEVY+++ LLP P L+LE + L + G P F KTLT S
Sbjct: 65 LADAETDEVYSKITLLPLPG-NDLDLENDAVLGLTPSPDVNG----NEKPASFAKTLTQS 119
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + GGFSVPR AE FP LDY + P Q ++AKD+HG W+FRHIYRG PRRHLLTT
Sbjct: 120 DANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGTPRRHLLTT 179
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQ----PRNGLPDSILSKQNSYPNVL 295
GWS FV+QK L++GD+++FLR + GEL +GIRR+ + D+ + N YP
Sbjct: 180 GWSTFVNQKKLIAGDSIVFLRSETGELCVGIRRAKRGGLGSNGLGSDNNNNSNNPYPGFS 239
Query: 296 SVVANAVSTKS--------------------------------------MFHVFYSPRAT 317
+ + T S F V Y PRA+
Sbjct: 240 GFLRDDEITTSKLMMMKRNGGNVNDANAPGGRVRVEAVAEAVARAACGQAFEVVYYPRAS 299
Query: 318 HADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKW 376
+F + + C G RFKM FE +DS G V+ + DP RWPNS W
Sbjct: 300 TPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSPW 359
Query: 377 RCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYP 432
R L V WDE + ++VSPW ++ ++P + + KKLR P D+P
Sbjct: 360 RLLQVAWDEPDLLQNVKRVSPWLVELVSNMPAIHLSPFSPRKKLRI---PQPFDFP 412
>gi|400269963|gb|AFP74916.1| auxin response factor 10 [Brassica napus]
Length = 706
Score = 255 bits (651), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 151/417 (36%), Positives = 206/417 (49%), Gaps = 57/417 (13%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAG + +P + V YFPQGH E + F VP P I C++ V+
Sbjct: 10 QLWHACAGSMVQIPSLNSTVFYFPQGHAEHAHAPPDFHAPRVP-----PLILCRLASVKF 64
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
LA+ E DEVY+++ LLP P L+LE + L + G P F KTLT S
Sbjct: 65 LADAETDEVYSKITLLPLPG-NDLDLENDAVLGLTPSPDVNG----NEKPASFAKTLTQS 119
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + GGFSVPR AE FP LDY + P Q ++AKD+HG W+FRHIYRG PRRHLLTT
Sbjct: 120 DANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGKTWKFRHIYRGTPRRHLLTT 179
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQ---------------PRNGLPDSI 284
GWS FV+QK L++GD+++FLR + G+L +GIRR+ + P G +
Sbjct: 180 GWSTFVNQKKLIAGDSIVFLRSETGDLCVGIRRAKRGGLGSNGDNNSNSNNPYPGFSGFL 239
Query: 285 LSKQNSYPNVLSVVANAVS----------------------------TKSMFHVFYSPRA 316
+ + ++ + NA F V Y PRA
Sbjct: 240 RDDEITTSKLMMMKRNATGGGGNANDANAPGGRVRVEAVAEAVARAACGQAFEVVYYPRA 299
Query: 317 THADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSK 375
+ +F + + C G RFKM FE +DS G V+ + DP RWPNS
Sbjct: 300 STPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSP 359
Query: 376 WRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYP 432
WR L V WDE + ++ SPW ++ ++P + + KKLR P D+P
Sbjct: 360 WRLLQVAWDEPDLLQNVKRASPWLVELVSNMPAIHLSPFSPRKKLRI---PQPFDFP 413
>gi|224140191|ref|XP_002323468.1| predicted protein [Populus trichocarpa]
gi|222868098|gb|EEF05229.1| predicted protein [Populus trichocarpa]
Length = 700
Score = 254 bits (650), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 177/509 (34%), Positives = 245/509 (48%), Gaps = 86/509 (16%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAG + +P + V YFPQGH E A P++ N C+V ++
Sbjct: 22 QLWHACAGGMVQMPAVNSKVFYFPQGHAEH-----ACEPVDFRNLPGASHTLCRVSAIKF 76
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSP-TKSTPHMFCKTLTA 178
+A+ E DEV+ ++ L+P +N L+D V G + P F KTLT
Sbjct: 77 MADPETDEVFAKIRLVP------INSNEIDLDDQEVAVNGEKEAAHDNKKPVSFAKTLTQ 130
Query: 179 SDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLT 238
SD + GGFSVPR AE FP LDY P Q L+AKD+HG W+FRHIYRG PRRHLLT
Sbjct: 131 SDANNGGGFSVPRYCAEMIFPRLDYTADPPVQTLLAKDVHGETWKFRHIYRGTPRRHLLT 190
Query: 239 TGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSI-------------- 284
TGWS FV+ K LV+GD+V+FLR ++G+L +G+RR+ + +G P+S+
Sbjct: 191 TGWSPFVNHKKLVAGDSVVFLRAENGDLCVGVRRAKRAISGGPESLWNPALGNLVVPYGG 250
Query: 285 ---LSKQNSYPNVLSVVANAVSTKSM--------------------------FHVFYSPR 315
S+++ + V + N +KS F Y PR
Sbjct: 251 FGAFSREDEHKMVKNGRGNGNGSKSNESLMGRGKVRAESVIQAAVLAANGLPFETVYYPR 310
Query: 316 ATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNS 374
A +F + ++ C G RFKM FE +DS G V + D DP WP S
Sbjct: 311 ANTPEFFVKASLVKTVMQIRWCSGMRFKMAFETEDSSRISWFMGTVCSVQDADPLCWPGS 370
Query: 375 KWRCLMVRWDECIGSDHQEQVSPW--EIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYP 432
WR L V WDE + ++VSPW E+ +S LS SSPR KKLR PD+P
Sbjct: 371 PWRLLQVTWDEPDLLQNVKRVSPWLVELASHMSAIHLSPFSSPR-KKLRLPQH---PDFP 426
Query: 433 VSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHPLGFEMRAPAHQSLALNGI 492
+ + F + S +LQ GF+ N P G + AH L L+ +
Sbjct: 427 IDGQ------FPMPIFSGNLLQPSSPFGFLPN-------NIPAGMQGARHAHYGLPLSDL 473
Query: 493 RKDNINELVRALPTSYTGFVESNRFPKVL 521
N+N+L +TG + + FP +L
Sbjct: 474 ---NLNKL-------HTGLLRAG-FPPLL 491
Score = 39.3 bits (90), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 4/79 (5%)
Query: 683 KVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVG 742
KV + VGR +DL L Y +L +L +F LR+ K +LY D +G
Sbjct: 623 KVFLESEDVGRTLDLQLLESYEELYRKLADMFG----LRNSEKFSNLLYRDDNGITKHIG 678
Query: 743 DDPWHEFCNEVSKIHIYTQ 761
++P+ F ++ I T+
Sbjct: 679 EEPFSNFSKTARRLTIVTR 697
>gi|225449038|ref|XP_002273590.1| PREDICTED: auxin response factor 18 [Vitis vinifera]
Length = 683
Score = 254 bits (650), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 155/409 (37%), Positives = 215/409 (52%), Gaps = 53/409 (12%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAG + +P + VVYFPQGH E A+ ++ N + P + C+V V+
Sbjct: 18 QLWHACAGGMVHMPSLNSRVVYFPQGHAEH-----AYGNVDFGNPRIPPLVLCRVSAVKY 72
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
LA+ E+DEVY ++ L+P EG + ED + G +P K P F KTLT S
Sbjct: 73 LADPESDEVYAKIRLIPLRNTEG------ETEDDVLMGGNGIEAPEK--PASFAKTLTQS 124
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + GGFSVPR AE FP LDY P Q ++AKD+HG WRFRHIYRG PRRHLLTT
Sbjct: 125 DANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWRFRHIYRGTPRRHLLTT 184
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDS---------------- 283
GWS FV++KNLV+GD+++FLR ++G+L +GIRR+ + G P+S
Sbjct: 185 GWSNFVNKKNLVAGDSIVFLRAENGDLCVGIRRAKRAGCG-PESPSGWNPASGNGTSPYR 243
Query: 284 -------------ILSKQNS--------YPNVLSVVANAVSTKSMFHVFYSPRATHADFV 322
IL+ N+ ++ A + F + Y PRA+ +F
Sbjct: 244 GYSGFLREDENRPILTHSNAGFRGKGRVRAESVAEAATLAANGQPFVIVYYPRASTPEFC 303
Query: 323 IPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMV 381
+ + C G +FKM FE DDS G ++ + DP RWPNS WR L V
Sbjct: 304 VKASSVRAAMQIQWCPGMKFKMAFETDDSSRISWFMGNISSVHVNDPIRWPNSPWRLLQV 363
Query: 382 RWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS-SPRMKKLRTGLQAPPP 429
WDE + ++V+PW ++ +P + + SP KKLR Q+ P
Sbjct: 364 TWDEPDLLQNVKRVNPWLVELVSHVPSIHLSPFSPPRKKLRLQQQSEFP 412
>gi|8778363|gb|AAF79371.1|AC007887_30 F15O4.37 [Arabidopsis thaliana]
Length = 767
Score = 254 bits (648), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 122/300 (40%), Positives = 180/300 (60%), Gaps = 17/300 (5%)
Query: 102 PNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGG 161
P D ++ C+V+ +QL +DE Y ++ L+P + V
Sbjct: 126 PICDFPSKLQCRVIAIQLKVENNSDETYAEITLMP--------------DTTQVVIPTQN 171
Query: 162 RSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVE 221
++ + + F K LTASDTS HGGFSVP++ A +C PPLD Q P+QE++A DLHG +
Sbjct: 172 QNQFRPLVNSFTKVLTASDTSVHGGFSVPKKHAIECLPPLDMSQPLPTQEILAIDLHGNQ 231
Query: 222 WRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLP 281
WRFRHIYRG +RHLLT GW+ F + K LV GD ++F+RG+ GELR+GIRR+ + +P
Sbjct: 232 WRFRHIYRGTAQRHLLTIGWNAFTTSKKLVEGDVIVFVRGETGELRVGIRRAGHQQGNIP 291
Query: 282 DSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTR 341
SI+S ++ +++ +A + MF V Y PR++ F++ Y K++ ++ N +G+R
Sbjct: 292 SSIVSIESMRHGIIASAKHAFDNQCMFIVVYKPRSSQ--FIVSYDKFLDVVNNKFNVGSR 349
Query: 342 FKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
F MRFE DD ERR G + G++D P+ W S+WR L V+WDE QVSPW+I+
Sbjct: 350 FTMRFEGDDFSERRSFGTIIGVSDFSPH-WKCSEWRSLEVQWDEFASFPRPNQVSPWDIE 408
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 62/96 (64%), Gaps = 3/96 (3%)
Query: 658 KLFGFS--LTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFN 715
K FG S L S T S Q R+CTKV QG +GRA+DL LNGY+ L+ ELE LF+
Sbjct: 543 KKFGQSQILRSPTEIQSKQFSSTRTCTKVQMQGVTIGRAVDLSVLNGYDQLILELEKLFD 602
Query: 716 MEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCN 751
++G L+ W I +T++E D M+VG+DPW EFCN
Sbjct: 603 LKGQLQ-ARNQWEIAFTNNEEDKMLVGEDPWPEFCN 637
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/36 (58%), Positives = 25/36 (69%)
Query: 55 SSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV 90
S +Y +LW CAGPL +PK G V YFPQGH+E V
Sbjct: 22 SYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELV 57
>gi|58802748|gb|AAW82475.1| auxin response factor 2 [Triticum aestivum]
Length = 202
Score = 253 bits (647), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 113/202 (55%), Positives = 152/202 (75%), Gaps = 1/202 (0%)
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
AS TSTHGGFSV RR A++C PPLD Q P+QELVAKDLHG+EWRFRHI+RGQPRRHLL
Sbjct: 1 ASGTSTHGGFSVLRRHADECLPPLDMTQSPPTQELVAKDLHGMEWRFRHIFRGQPRRHLL 60
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
+GWS+FVS K LV+GDA +FLRG+ GELR+G+RR+++ + + S++S + + VL+
Sbjct: 61 QSGWSVFVSSKRLVAGDAFIFLRGESGELRVGVRRAMRQLSNIASSVISSHSMHLGVLAT 120
Query: 298 VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCN 357
+A++TK+MF V+Y PR + ++F+IPY KY+ + N IGTRFKMRFE +++PE+R
Sbjct: 121 AWHAINTKTMFTVYYKPRTSRSEFIIPYDKYMDSVKNIYSIGTRFKMRFEGEEAPEQRFT 180
Query: 358 GVVTGITDLDPYRWPNSKWRCL 379
G + G +LD WP S WR L
Sbjct: 181 GTIVGSDNLDQL-WPESSWRSL 201
>gi|414877791|tpg|DAA54922.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 652
Score = 253 bits (646), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 153/392 (39%), Positives = 203/392 (51%), Gaps = 77/392 (19%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIE-VPNFDLQPQIFCK 113
+++ ELW ACAGPL+ +P G V Y PQGH+EQV AS++ + P ++L +I CK
Sbjct: 20 ALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWKIPCK 79
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTP---- 169
+++++L + DEVY Q+ LLP + KQ E+ E + P
Sbjct: 80 LMNIELKVEPDTDEVYAQLTLLP---------DKKQDENTSTTVEEEEVVVPPALPATNE 130
Query: 170 ----HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFR 225
H FCKTLTASDTSTHGGFSV RR A++C PPLD Q P+QELVAKDLHG EWRFR
Sbjct: 131 GPHIHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFR 190
Query: 226 HIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSIL 285
HI+RGQPRRHLL +GWS+FVS K LV+GDA +FLR E ++
Sbjct: 191 HIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRTSPAEF-----------------VV 233
Query: 286 SKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMR 345
S+ Y ++ + + K F
Sbjct: 234 SRDRYYESLKRNYSIGMRFKMRF------------------------------------- 256
Query: 346 FEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS 405
E +++ E+R G + GI DP W +SKWR L VRWDE E+VSPW+I+ SVS
Sbjct: 257 -EGEEAAEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEPSVS 315
Query: 406 LPPLSIQSSP-RMKKLRTGLQAPPPDYPVSAR 436
P + P R K+ R+ + A P D R
Sbjct: 316 --PCHVNPLPVRFKRSRSSVNALPSDVSTVTR 345
>gi|414877789|tpg|DAA54920.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 661
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 153/392 (39%), Positives = 203/392 (51%), Gaps = 77/392 (19%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIE-VPNFDLQPQIFCK 113
+++ ELW ACAGPL+ +P G V Y PQGH+EQV AS++ + P ++L +I CK
Sbjct: 20 ALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWKIPCK 79
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTP---- 169
+++++L + DEVY Q+ LLP + KQ E+ E + P
Sbjct: 80 LMNIELKVEPDTDEVYAQLTLLP---------DKKQDENTSTTVEEEEVVVPPALPATNE 130
Query: 170 ----HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFR 225
H FCKTLTASDTSTHGGFSV RR A++C PPLD Q P+QELVAKDLHG EWRFR
Sbjct: 131 GPHIHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFR 190
Query: 226 HIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSIL 285
HI+RGQPRRHLL +GWS+FVS K LV+GDA +FLR E ++
Sbjct: 191 HIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRTSPAEF-----------------VV 233
Query: 286 SKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMR 345
S+ Y ++ + + K F
Sbjct: 234 SRDRYYESLKRNYSIGMRFKMRF------------------------------------- 256
Query: 346 FEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS 405
E +++ E+R G + GI DP W +SKWR L VRWDE E+VSPW+I+ SVS
Sbjct: 257 -EGEEAAEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEPSVS 315
Query: 406 LPPLSIQSSP-RMKKLRTGLQAPPPDYPVSAR 436
P + P R K+ R+ + A P D R
Sbjct: 316 --PCHVNPLPVRFKRSRSSVNALPSDVSTVTR 345
>gi|414877787|tpg|DAA54918.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 777
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 153/392 (39%), Positives = 203/392 (51%), Gaps = 77/392 (19%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIE-VPNFDLQPQIFCK 113
+++ ELW ACAGPL+ +P G V Y PQGH+EQV AS++ + P ++L +I CK
Sbjct: 22 ALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWKIPCK 81
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTP---- 169
+++++L + DEVY Q+ LLP + KQ E+ E + P
Sbjct: 82 LMNIELKVEPDTDEVYAQLTLLP---------DKKQDENTSTTVEEEEVVVPPALPATNE 132
Query: 170 ----HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFR 225
H FCKTLTASDTSTHGGFSV RR A++C PPLD Q P+QELVAKDLHG EWRFR
Sbjct: 133 GPHIHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFR 192
Query: 226 HIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSIL 285
HI+RGQPRRHLL +GWS+FVS K LV+GDA +FLR E ++
Sbjct: 193 HIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRTSPAEF-----------------VV 235
Query: 286 SKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMR 345
S+ Y ++ + + K F
Sbjct: 236 SRDRYYESLKRNYSIGMRFKMRF------------------------------------- 258
Query: 346 FEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS 405
E +++ E+R G + GI DP W +SKWR L VRWDE E+VSPW+I+ SVS
Sbjct: 259 -EGEEAAEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEPSVS 317
Query: 406 LPPLSIQSSP-RMKKLRTGLQAPPPDYPVSAR 436
P + P R K+ R+ + A P D R
Sbjct: 318 --PCHVNPLPVRFKRSRSSVNALPSDVSTVTR 347
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 75/97 (77%)
Query: 674 QSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTD 733
QS RSC KVHKQGS +GR+IDL + Y++L++EL+ +F+ +G L+ P K W ++YTD
Sbjct: 644 QSSSTRSCKKVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDGELKSPCKSWLVVYTD 703
Query: 734 SENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIG 770
+E D+M+VGDDPW+EFC+ V KI IYT+EEVE+M G
Sbjct: 704 NEGDIMLVGDDPWNEFCDMVHKIFIYTREEVERMNPG 740
>gi|414877790|tpg|DAA54921.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 775
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 153/392 (39%), Positives = 203/392 (51%), Gaps = 77/392 (19%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIE-VPNFDLQPQIFCK 113
+++ ELW ACAGPL+ +P G V Y PQGH+EQV AS++ + P ++L +I CK
Sbjct: 20 ALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWKIPCK 79
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTP---- 169
+++++L + DEVY Q+ LLP + KQ E+ E + P
Sbjct: 80 LMNIELKVEPDTDEVYAQLTLLP---------DKKQDENTSTTVEEEEVVVPPALPATNE 130
Query: 170 ----HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFR 225
H FCKTLTASDTSTHGGFSV RR A++C PPLD Q P+QELVAKDLHG EWRFR
Sbjct: 131 GPHIHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFR 190
Query: 226 HIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSIL 285
HI+RGQPRRHLL +GWS+FVS K LV+GDA +FLR E ++
Sbjct: 191 HIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRTSPAEF-----------------VV 233
Query: 286 SKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMR 345
S+ Y ++ + + K F
Sbjct: 234 SRDRYYESLKRNYSIGMRFKMRF------------------------------------- 256
Query: 346 FEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS 405
E +++ E+R G + GI DP W +SKWR L VRWDE E+VSPW+I+ SVS
Sbjct: 257 -EGEEAAEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEPSVS 315
Query: 406 LPPLSIQSSP-RMKKLRTGLQAPPPDYPVSAR 436
P + P R K+ R+ + A P D R
Sbjct: 316 --PCHVNPLPVRFKRSRSSVNALPSDVSTVTR 345
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 75/97 (77%)
Query: 674 QSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTD 733
QS RSC KVHKQGS +GR+IDL + Y++L++EL+ +F+ +G L+ P K W ++YTD
Sbjct: 642 QSSSTRSCKKVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDGELKSPCKSWLVVYTD 701
Query: 734 SENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIG 770
+E D+M+VGDDPW+EFC+ V KI IYT+EEVE+M G
Sbjct: 702 NEGDIMLVGDDPWNEFCDMVHKIFIYTREEVERMNPG 738
>gi|414877788|tpg|DAA54919.1| TPA: hypothetical protein ZEAMMB73_084407 [Zea mays]
Length = 771
Score = 253 bits (645), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 153/392 (39%), Positives = 203/392 (51%), Gaps = 77/392 (19%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIE-VPNFDLQPQIFCK 113
+++ ELW ACAGPL+ +P G V Y PQGH+EQV AS++ + P ++L +I CK
Sbjct: 20 ALFVELWKACAGPLSCVPPLGEKVYYLPQGHIEQVEASTNQLAEQQGTPLYNLPWKIPCK 79
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTP---- 169
+++++L + DEVY Q+ LLP + KQ E+ E + P
Sbjct: 80 LMNIELKVEPDTDEVYAQLTLLP---------DKKQDENTSTTVEEEEVVVPPALPATNE 130
Query: 170 ----HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFR 225
H FCKTLTASDTSTHGGFSV RR A++C PPLD Q P+QELVAKDLHG EWRFR
Sbjct: 131 GPHIHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQHPPNQELVAKDLHGAEWRFR 190
Query: 226 HIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSIL 285
HI+RGQPRRHLL +GWS+FVS K LV+GDA +FLR E ++
Sbjct: 191 HIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRTSPAEF-----------------VV 233
Query: 286 SKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMR 345
S+ Y ++ + + K F
Sbjct: 234 SRDRYYESLKRNYSIGMRFKMRF------------------------------------- 256
Query: 346 FEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS 405
E +++ E+R G + GI DP W +SKWR L VRWDE E+VSPW+I+ SVS
Sbjct: 257 -EGEEAAEQRFTGTIVGIGASDPSGWADSKWRSLKVRWDEPSSISRPERVSPWQIEPSVS 315
Query: 406 LPPLSIQSSP-RMKKLRTGLQAPPPDYPVSAR 436
P + P R K+ R+ + A P D R
Sbjct: 316 --PCHVNPLPVRFKRSRSSVNALPSDVSTVTR 345
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 75/97 (77%)
Query: 674 QSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTD 733
QS RSC KVHKQGS +GR+IDL + Y++L++EL+ +F+ +G L+ P K W ++YTD
Sbjct: 638 QSSSTRSCKKVHKQGSALGRSIDLTKFACYDELIAELDQMFDFDGELKSPCKSWLVVYTD 697
Query: 734 SENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIG 770
+E D+M+VGDDPW+EFC+ V KI IYT+EEVE+M G
Sbjct: 698 NEGDIMLVGDDPWNEFCDMVHKIFIYTREEVERMNPG 734
>gi|379323242|gb|AFD01320.1| auxin response factor 25 [Brassica rapa subsp. pekinensis]
Length = 549
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 130/342 (38%), Positives = 194/342 (56%), Gaps = 27/342 (7%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LW CAGPL PK G +V L Q+ P FD+ +I C V + L
Sbjct: 26 KLWKLCAGPLFDTPKIGEKLVASMDDELCQLK----------PIFDIPSKICCNVFSINL 75
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
+E+Y +V+LLP + + + ++ F K L+AS
Sbjct: 76 KVEPSTNEIYAEVSLLPDTSDVEIPIPKNENNIQNIN--------------YFTKVLSAS 121
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
DTST+GGF + +R A +C P LD Q PSQE++AKD+HG EW F+H RG P+RHL T+
Sbjct: 122 DTSTNGGFVLYKRHAIECLPLLDMSQLTPSQEIIAKDIHGHEWSFKHTSRGTPKRHLFTS 181
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVA 299
GW+ F K LV+GD+ +FLRG++GE R+GI ++ + +P S++SK++ + +V++
Sbjct: 182 GWNEFAKGKKLVAGDSFVFLRGENGESRVGISKAAHQQRNIPTSLISKESMHHSVVATAL 241
Query: 300 NAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCNGV 359
NA+ K MF VFY PR++ F++ + K+V + N IG++F M+FE D E R NG
Sbjct: 242 NAIENKCMFVVFYKPRSSQ--FIVNFDKFVDRVNNKFSIGSKFSMKFEGKDLNEIRYNGT 299
Query: 360 VTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
V G+ D + W +S+WR L V+WDE ++VSPWEI+
Sbjct: 300 VVGVRDFSTH-WKDSEWRSLEVQWDEAATIPRPDKVSPWEIE 340
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 77/153 (50%), Gaps = 23/153 (15%)
Query: 634 PTPTFKANMRSHKDGSFNGTAAGCKLFGFSLTSETPTPSSQSP----------------- 676
PT + +++ K+ S C+LFG L T P
Sbjct: 372 PTIYNEQMVQAMKEPSTTTATTSCRLFGVDLMVPAITKDPVEPIVSNKKCKISKIFEDEK 431
Query: 677 ----GKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYT 732
+S TKVH +G ++ R +DL +GYN L+ ELE LF+++G L K W++ +
Sbjct: 432 VDHVQAKSRTKVHMEG-VIERTVDLTIFDGYNQLIDELERLFDIKGELHMHNK-WKMFFI 489
Query: 733 DSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVE 765
++ D+M++GDDPW +FCN +I I ++E+V+
Sbjct: 490 YNDGDMMILGDDPWPKFCNMAKEIFICSKEDVK 522
>gi|75261153|sp|Q6K223.1|ARFH_ORYSJ RecName: Full=Auxin response factor 8
gi|48717038|dbj|BAD23727.1| putative auxin response factor 10 [Oryza sativa Japonica Group]
gi|215769265|dbj|BAH01494.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623278|gb|EEE57410.1| hypothetical protein OsJ_07601 [Oryza sativa Japonica Group]
Length = 681
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 150/389 (38%), Positives = 202/389 (51%), Gaps = 40/389 (10%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LW ACAG + ++P G V YFPQGH E +A E+ + + C+V V+
Sbjct: 21 QLWLACAGGMCTVPPVGAAVYYFPQGHAEHALGLAA---PELSAARVPALVPCRVASVRY 77
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
+A+ + DEV+ ++ L+P + ED V+E+G P F KTLT S
Sbjct: 78 MADPDTDEVFARIRLVP----------LRAAEDGDVEEDGAAAGEEHEKPASFAKTLTQS 127
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + GGFSVPR AE FP LDY P Q +VAKD+HGV W FRHIYRG PRRHLLTT
Sbjct: 128 DANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGVAWNFRHIYRGTPRRHLLTT 187
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQ---------PRNGLPD----SILS 286
GWS FV+QK LV+GD+++FLRG G+L +GIRR+ + LP L
Sbjct: 188 GWSTFVNQKKLVAGDSIVFLRGDGGDLHVGIRRAKRGFCGGGGGAEEASLPGWDQYGGLM 247
Query: 287 KQNSYPNVLSVVANAVSTKSM------------FHVFYSPRATHADFVIPYQKYVKIIMN 334
+ N+ P + V + + F V Y PRA+ +F + +
Sbjct: 248 RGNASPCAAAKGRGKVRAEDLVEAARLANGGQPFEVVYYPRASTPEFCVRAAAVRAAMRV 307
Query: 335 PICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQE 393
C G RFKM FE +DS G V + DP RWP S WR L V WDE + +
Sbjct: 308 QWCPGMRFKMAFETEDSSRISWFMGTVASVQVADPIRWPQSPWRLLQVTWDEPDLLQNVK 367
Query: 394 QVSPWEIDRSVSLPPLSIQS-SPRMKKLR 421
+VSPW ++ S+P +++ S SP KK R
Sbjct: 368 RVSPWLVELVSSMPAINLSSFSPPRKKPR 396
>gi|224132500|ref|XP_002328300.1| predicted protein [Populus trichocarpa]
gi|222837815|gb|EEE76180.1| predicted protein [Populus trichocarpa]
Length = 708
Score = 252 bits (644), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 155/415 (37%), Positives = 207/415 (49%), Gaps = 53/415 (12%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LW ACAG + +P V YFPQGH E S FP +P+ + C+V V+
Sbjct: 12 QLWQACAGSMVQIPPLNTKVFYFPQGHAEHSQSPVDFPQ-RIPSL-----VLCRVASVKF 65
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
LA+ DEV+ +++L+P P+ + L+ Q D+ D G S P F KTLT S
Sbjct: 66 LADPGTDEVFAKISLVPLPDAD---LDISQDVDICGD---GNDSNNAEKPASFAKTLTQS 119
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + GGFSVPR AE FP LDY P Q L+AKD+HG W+FRHIYRG PRRHLLTT
Sbjct: 120 DANNGGGFSVPRYCAETIFPRLDYSADPPVQTLIAKDVHGEVWKFRHIYRGTPRRHLLTT 179
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRR--------------------------S 273
GWS FV+QK LV+GD+++FLR ++G+L +GIRR S
Sbjct: 180 GWSTFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGVGIGSGPESSPSHIGWNSNNATS 239
Query: 274 VQPRNGLPDSILSKQNSYPNV----------LSVVANAVSTKSMFHVFYSPRATHADFVI 323
P G S+ + V + A + + F V Y PRA+ +F +
Sbjct: 240 ANPYGGFSLSVKEDEMRNGGVKGRGRVKSEEVLEAAGLAANGNPFQVVYYPRASTPEFCV 299
Query: 324 PYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMVR 382
+ C G RFKM FE +DS G V + DP RWPNS WR L V
Sbjct: 300 KASSVRAAMRTCWCSGMRFKMAFETEDSSRISWFMGTVASVQVADPDRWPNSPWRLLQVT 359
Query: 383 WDECIGSDHQEQVSPWEIDRSVSLPPLSIQS-SPRMKKLRTGLQAPPPDYPVSAR 436
WDE + VSPW ++ ++P + + SP KKLR Q D+P+ +
Sbjct: 360 WDEPDLLQTVKCVSPWLVELVSNMPVIHLSPFSPPRKKLRFPQQL---DFPLDGQ 411
>gi|218191212|gb|EEC73639.1| hypothetical protein OsI_08153 [Oryza sativa Indica Group]
Length = 681
Score = 252 bits (643), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 154/400 (38%), Positives = 203/400 (50%), Gaps = 46/400 (11%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LW ACAG + ++P G V YFPQGH E +A E+ + + C+V V+
Sbjct: 21 QLWLACAGGMCTVPPVGAAVYYFPQGHAEHALGLAA---PELSAARVPALVPCRVASVRY 77
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
+A+ + DEV+ ++ L+P + ED V+E+G P F KTLT S
Sbjct: 78 MADPDTDEVFARIRLVP----------LRAAEDGDVEEDGAAAGEEHEKPASFAKTLTQS 127
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + GGFSVPR AE FP LDY P Q +VAKD+HGV W FRHIYRG PRRHLLTT
Sbjct: 128 DANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGVAWNFRHIYRGTPRRHLLTT 187
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQ---------PRNGLPD----SILS 286
GWS FV+QK LV+GD+++FLRG G+L +GIRR+ + LP L
Sbjct: 188 GWSTFVNQKKLVAGDSIVFLRGDGGDLHVGIRRAKRGFCGGGGGAEEASLPGWDQYGGLM 247
Query: 287 KQNSYPNVLSV------------VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMN 334
+ N+ P + A S F V Y PRA+ +F + +
Sbjct: 248 RGNASPCAAAKGRGKVRAEDVVEAARLASGGQPFEVVYYPRASTPEFCVRAAAVRAAMRV 307
Query: 335 PICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQE 393
C G RFKM FE +DS G V + DP RWP S WR L V WDE + +
Sbjct: 308 QWCPGMRFKMAFETEDSSRISWFMGTVASVQVADPIRWPQSPWRLLQVTWDEPDLLQNVK 367
Query: 394 QVSPWEIDRSVSLPPLSIQS-SPRMKKLRTGLQAPPPDYP 432
+VSPW ++ S+P + + S SP KK R P YP
Sbjct: 368 RVSPWLVELVSSMPAIHLSSFSPPRKKPRI------PAYP 401
>gi|449482590|ref|XP_004156337.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
Length = 701
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 166/476 (34%), Positives = 230/476 (48%), Gaps = 76/476 (15%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPI-EVPNFDLQPQIFCKVVDVQ 118
+LWHACAG + +P V YFPQGH E + F +VP++ L C+V ++
Sbjct: 21 QLWHACAGGMVQMPPVNARVFYFPQGHAEHSCAPVDFRNCPKVPSYTL-----CRVSAIK 75
Query: 119 LLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTA 178
LA+ + DEV+ ++ L+P +N ED G+ G + P F KTLT
Sbjct: 76 FLADPDTDEVFAKLRLIP------INGSELDFEDDGIGRLNGSE---QDKPTSFAKTLTQ 126
Query: 179 SDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLT 238
SD + GGFSVPR AE FP LDY P Q ++AKD+HG W+FRHIYRG PRRHLLT
Sbjct: 127 SDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLT 186
Query: 239 TGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRS------------------------- 273
TGWS FV+ K LV+GD+++FLR ++G+L +GIRR+
Sbjct: 187 TGWSTFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGDGPESSCGWNPAGGNCAVSY 246
Query: 274 --------------VQPRNGL--PDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRAT 317
+ NG+ S++ K P ++ A S F + + PRA+
Sbjct: 247 GAFSAFLREDDNRLTRSANGMNGNGSLMGKGKVKPESVTEAAKLASNGQPFEIIFYPRAS 306
Query: 318 HADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKW 376
+F + + C G RFKM FE +DS G + + DP RWP S W
Sbjct: 307 TPEFCVKAALVKAALQIRWCSGMRFKMAFETEDSSRISWFMGTINSVQVSDPLRWPESPW 366
Query: 377 RCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS-SPRMKKLRTGLQAPPPDYPVSA 435
R L V WDE + ++VSPW ++ S+ P+ + SP KK R PD+P
Sbjct: 367 RLLQVTWDEPDLLQNVKRVSPWLVELVSSMSPIHLAPFSPPRKKFRYPQH---PDFP--- 420
Query: 436 RGGGVLDFEESVRS-SKVLQGQENVGFVSPLYGCDTVNHPLGFEMRAPAHQSLALN 490
LD + V S S L G SP +GC N+P G + AH L+L+
Sbjct: 421 -----LDNQPPVPSFSSYLHGTG-----SP-FGCPPDNNPAGMQGARHAHFGLSLS 465
>gi|255586869|ref|XP_002534044.1| Auxin response factor, putative [Ricinus communis]
gi|223525942|gb|EEF28340.1| Auxin response factor, putative [Ricinus communis]
Length = 590
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 151/394 (38%), Positives = 210/394 (53%), Gaps = 43/394 (10%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAG + +P + V YFPQGH E + F ++ I CKV ++
Sbjct: 25 QLWHACAGGMVQMPPLNSRVFYFPQGHAEHAQGNVDFGRCQI-----SAMIPCKVSAIKY 79
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGG--GRSPTKSTPHMFCKTLT 177
LA+ E DEVY ++ L+P + + LE+ G D + G + ++ P F KTLT
Sbjct: 80 LADPETDEVYAKIRLIPLIDRDVF------LENSGDDCDDGLYNGAESQEKPASFAKTLT 133
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
SD + GGFSVPR AE FP LDY + P Q ++AKD+HG W+FRHIYRG PRRHLL
Sbjct: 134 QSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTILAKDVHGETWKFRHIYRGTPRRHLL 193
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNG------------------ 279
TTGWS FV+QK LV+GD+++FLR +G+L +GIRR+ + G
Sbjct: 194 TTGWSNFVNQKKLVAGDSIVFLRADNGDLCVGIRRAKRGIGGGNECPSGWNSFGGYAAGF 253
Query: 280 --LPDSILSKQN------SYPNVLSVV--ANAVSTKSMFHVFYSPRATHADFVIPYQKYV 329
+S L ++N S V SV+ A + F + Y PRA+ +F +
Sbjct: 254 LREDESKLMRRNGNGDNKSKVRVESVIQAATLAANGQPFEIVYYPRASTPEFCVRASAVR 313
Query: 330 KIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIG 388
+ C G RFKM FE +DS G ++ + DP RWPNS WR L V WDE
Sbjct: 314 AAMQIQWCPGMRFKMPFETEDSSRISWFMGTISSVQVADPIRWPNSPWRLLQVAWDEPDL 373
Query: 389 SDHQEQVSPWEIDRSVSLPPLSIQS-SPRMKKLR 421
+ ++VSPW ++ ++P + + SP KKLR
Sbjct: 374 LQNVKRVSPWLVELVANMPAVHLSPFSPPRKKLR 407
Score = 42.0 bits (97), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 8/88 (9%)
Query: 683 KVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEG--LLRDPAKGWRILYTDSENDVMV 740
KV + VGR +DL L Y +L +L ++F +E +L +LY D+ +
Sbjct: 508 KVFMESEDVGRTLDLSVLGSYEELYGKLANMFEIENSDMLSS------VLYRDAAGAIKR 561
Query: 741 VGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
GD+P+ EF ++ I T E +
Sbjct: 562 TGDEPFSEFLKTARRLTILTDSGSENIA 589
>gi|300373061|gb|ADG43151.1| auxin response factor 17 [Zea mays]
gi|413934018|gb|AFW68569.1| hypothetical protein ZEAMMB73_208127 [Zea mays]
Length = 644
Score = 251 bits (641), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 156/418 (37%), Positives = 211/418 (50%), Gaps = 60/418 (14%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQ---------VASSSAFPPIEVPNFDLQPQI 110
+LWHACAG + +P + V YFPQGH E +A + A P L P +
Sbjct: 13 QLWHACAGGMVQMPPVRSRVYYFPQGHAEHAHGGGGATDLAGARARP--------LPPLV 64
Query: 111 FCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPH 170
C V V+ LA+ E DEV+ ++ L+P E +E + + G+D E +
Sbjct: 65 LCTVAGVRFLADPETDEVFAKIRLVPAAPGE---VEFGEPREFGIDPED-----AREKLS 116
Query: 171 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRG 230
F KTLT SD + GGFSVPR AE FP LDY+ P Q ++AKD+HG W+FRHI+RG
Sbjct: 117 SFAKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIFRG 176
Query: 231 QPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNS 290
PRRHLLTTGWS FV+QK LV+GD+++FLR + GEL +GIRR+ + G + I
Sbjct: 177 TPRRHLLTTGWSAFVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVSCGGMECISGWNAP 236
Query: 291 YPNVLSV------------------------VANAVSTKSM------FHVFYSPRATHAD 320
LS + + V S+ F V Y PRA+ +
Sbjct: 237 VYGALSAFLKDEEGKITKGPGGYMRGRGKVEITDVVEAASLAASGQPFEVVYYPRASTPE 296
Query: 321 FVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCL 379
FV+ + N C G RFKM FE +DS G + D RWPNS WR L
Sbjct: 297 FVVKAASVQNAMRNQWCPGMRFKMAFETEDSSRISWFMGTIASAQVADTIRWPNSPWRLL 356
Query: 380 MVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS-SPRMKKLRTGLQAPPPDYPVSAR 436
V WDE + + V+PW ++ S+PP+ + + SP KKLR A PD+P +
Sbjct: 357 QVSWDEPDLLQNVKCVNPWLVEIVSSIPPIHLGTFSPPRKKLRV---AQHPDFPFEGQ 411
>gi|449451004|ref|XP_004143252.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
Length = 698
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 166/476 (34%), Positives = 230/476 (48%), Gaps = 76/476 (15%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPI-EVPNFDLQPQIFCKVVDVQ 118
+LWHACAG + +P V YFPQGH E + F +VP++ L C+V ++
Sbjct: 21 QLWHACAGGMVQMPPVNARVFYFPQGHAEHSCAPVDFRNCPKVPSYTL-----CRVSAIK 75
Query: 119 LLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTA 178
LA+ + DEV+ ++ L+P +N ED G+ G + P F KTLT
Sbjct: 76 FLADPDTDEVFAKLRLIP------INGSELDFEDDGIGRLNGSE---QDKPTSFAKTLTQ 126
Query: 179 SDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLT 238
SD + GGFSVPR AE FP LDY P Q ++AKD+HG W+FRHIYRG PRRHLLT
Sbjct: 127 SDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLT 186
Query: 239 TGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRS------------------------- 273
TGWS FV+ K LV+GD+++FLR ++G+L +GIRR+
Sbjct: 187 TGWSTFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKRGIGDGPESSCGWNPAGGNCAVSY 246
Query: 274 --------------VQPRNGL--PDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRAT 317
+ NG+ S++ K P ++ A S F + + PRA+
Sbjct: 247 GAFSAFLREDDNRLTRSANGMNGNGSLMGKGKVKPESVTEAAKLASNGQPFEIIFYPRAS 306
Query: 318 HADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKW 376
+F + + C G RFKM FE +DS G + + DP RWP S W
Sbjct: 307 TPEFCVKAALVKAALQIRWCSGMRFKMAFETEDSSRISWFMGTINSVQVSDPLRWPESPW 366
Query: 377 RCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS-SPRMKKLRTGLQAPPPDYPVSA 435
R L V WDE + ++VSPW ++ S+ P+ + SP KK R PD+P
Sbjct: 367 RLLQVTWDEPDLLQNVKRVSPWLVELVSSMSPIHLAPFSPPRKKFRYPQH---PDFP--- 420
Query: 436 RGGGVLDFEESVRS-SKVLQGQENVGFVSPLYGCDTVNHPLGFEMRAPAHQSLALN 490
LD + V S S L G SP +GC N+P G + AH L+L+
Sbjct: 421 -----LDNQPPVPSFSSYLHGTG-----SP-FGCPPDNNPAGMQGARHAHFGLSLS 465
>gi|225439992|ref|XP_002281486.1| PREDICTED: auxin response factor 18-like [Vitis vinifera]
Length = 701
Score = 251 bits (640), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 166/478 (34%), Positives = 235/478 (49%), Gaps = 79/478 (16%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQ-IFCKVVDVQ 118
+LWHACAG + +P + V YFPQGH E +S ++ N+ P I C+V ++
Sbjct: 21 QLWHACAGGMVQMPPVNSKVFYFPQGHAEHACAS-----VDFRNYPRIPAYIPCRVSAMK 75
Query: 119 LLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTA 178
+A+ E+DEVY ++ L+P LN +D G G + ++ P F KTLT
Sbjct: 76 FMADPESDEVYAKITLVP------LNGSESDYDDDGY----GNGTESQEKPASFAKTLTQ 125
Query: 179 SDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLT 238
SD + GGFSVPR AE FP LDY P Q ++AKD+HG W+FRHIYRG PRRHLLT
Sbjct: 126 SDANNGGGFSVPRYCAETIFPRLDYTADPPVQNILAKDVHGETWKFRHIYRGTPRRHLLT 185
Query: 239 TGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRS---------------------VQPR 277
TGWS FV+ K L++GD+++FLR ++G+L +GIRR+ V P
Sbjct: 186 TGWSTFVNHKKLIAGDSIVFLRAENGDLCVGIRRAKRGIGCGPESSSGWNPAGCNYVMPY 245
Query: 278 NGLPDSILSKQNSYPN-----------------------VLSVVANAVSTKSMFHVFYSP 314
G + +N V+ V AV+ + F V Y P
Sbjct: 246 GGFSAFLREDENKLTRNGNGGSSGSNGSFFGRVKVTAEAVIEAVRLAVNGQP-FEVIYYP 304
Query: 315 RATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPN 373
RA+ +F + C G RFKM FE +DS G ++ + DP RWP+
Sbjct: 305 RASTPEFCVKSSLVKSASQIRWCSGMRFKMAFETEDSSRISWFMGTISSVQVADPVRWPD 364
Query: 374 SKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSI-QSSPRMKKLRTGLQAPPPDYP 432
S WR L V WDE + ++VSPW ++ ++P + + SP KKLR PD+P
Sbjct: 365 SPWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPSIHLTHFSPPRKKLRFPQY---PDFP 421
Query: 433 VSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHPLGFEMRAPAHQSLALN 490
+ A+ F SS + VG +P +GC + N P G + A L+L+
Sbjct: 422 LDAQ------FSMPTFSSNL------VGPSNP-FGCLSDNIPAGMQGARHAQYGLSLS 466
Score = 43.5 bits (101), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 683 KVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVG 742
KV + VGR +DL L Y++L +L +F +E D +LY D+ V +G
Sbjct: 616 KVFMESEDVGRTLDLSLLTSYDELCGKLAKMFTIE----DSEMRNHVLYRDATGAVKHIG 671
Query: 743 DDPWHEFCNEVSKIHI 758
D+P+ +F ++ I
Sbjct: 672 DEPFSDFTKTAKRLTI 687
>gi|255578143|ref|XP_002529941.1| Auxin response factor, putative [Ricinus communis]
gi|223530571|gb|EEF32449.1| Auxin response factor, putative [Ricinus communis]
Length = 709
Score = 250 bits (639), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 150/403 (37%), Positives = 205/403 (50%), Gaps = 52/403 (12%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAG + +P + V YFPQGH E S F +P+ + C+V V+
Sbjct: 11 QLWHACAGSMVQIPPINSKVFYFPQGHAEHSQSPVDFSS-RIPSL-----VLCRVAGVKY 64
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
LA+ E DEVY +++L P P E L+ +++G+ + + + P F KTLT S
Sbjct: 65 LADSETDEVYAKISLFPLPSNE-LDFG----DEIGLCDTSTNGTNSTEKPTSFAKTLTQS 119
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + GGFSVPR AE FP LDY P Q +VAKD+HG W+FRHIYRG PRRHLLTT
Sbjct: 120 DANNGGGFSVPRYCAETIFPRLDYSADPPVQTVVAKDVHGEIWKFRHIYRGTPRRHLLTT 179
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQ-------PRNGLPDSILSKQ---N 289
GWS FV+QK LV+GD+++FLR + G+L +GIRR+ + P + P + N
Sbjct: 180 GWSTFVNQKKLVAGDSIVFLRAESGDLCVGIRRAKRGIGGGNGPESSPPSGWTTNASCVN 239
Query: 290 SYPNVLSVVANAVSTKSM-----------------------------FHVFYSPRATHAD 320
Y S+ +K + F V Y PRA+ +
Sbjct: 240 PYTGGFSLFLKEDESKGLRNGGGIRGKVRVKAEEVLESAALAANGQPFEVVYYPRASTPE 299
Query: 321 FVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCL 379
F + C G RFKM FE +DS G + + DP RWPNS WR L
Sbjct: 300 FCVKASSVRASTRIQWCSGMRFKMAFETEDSSRISWFMGTIASVQVADPIRWPNSPWRLL 359
Query: 380 MVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS-SPRMKKLR 421
V WDE + ++VSPW ++ ++P + + SP KKLR
Sbjct: 360 QVTWDEPDLLQNVKRVSPWLVELVSNMPVIHLSPFSPPRKKLR 402
>gi|134103847|gb|ABO60876.1| auxin response factor 3 [Gossypium hirsutum]
Length = 647
Score = 250 bits (638), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 153/400 (38%), Positives = 204/400 (51%), Gaps = 55/400 (13%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQV---ASSSAFPPIEVPNFDLQPQIFCKVVD 116
+LWHACAG + +P + V YFPQGH E S+ PPI + C+V
Sbjct: 12 QLWHACAGSMVQIPPVNSKVFYFPQGHAEHSLYPVDFSSSPPIPA-------LLLCRVAS 64
Query: 117 VQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTL 176
V+ LA+ E DEVY ++ L+P P E DL D GG S P F KTL
Sbjct: 65 VKFLADAETDEVYAKIMLVPLPNTE---------PDLENDAVFGGGSDNVEKPASFAKTL 115
Query: 177 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHL 236
T SD + GGFSVPR AE FP LDY P Q ++A+D+HG W+FRHIYRG PRRHL
Sbjct: 116 TQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVIARDVHGEIWKFRHIYRGTPRRHL 175
Query: 237 LTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQN------S 290
LTTGWS FV+ K LV+GD+++FLR ++GEL +GIRR+ + + +S L N
Sbjct: 176 LTTGWSSFVNHKKLVAGDSIVFLRAENGELCVGIRRAKRGNDTGAESGLGNGNDVSPYGG 235
Query: 291 YPNVLSVVANAVSTKSM------------------------FHVFYSPRATHADFVIPYQ 326
+ L + ++ K F + Y PRA+ +F +
Sbjct: 236 FSGFLKEDESKITRKRSPRGKGKVRAEAVVEAVALAANGQPFEIVYYPRASTPEFCVKAS 295
Query: 327 KYVKIIMNPICIGTRFKMRFEMDD-SPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDE 385
+ P C RFKM FE +D S G V+ + DP RWPNS WR L V WDE
Sbjct: 296 AVRAAMRVPWCSLMRFKMAFETEDCSRISWFMGTVSSVHIADPLRWPNSPWRLLQVTWDE 355
Query: 386 CIGSDHQEQVSPWEIDRSVSLPPLSIQS----SPRMKKLR 421
+ E+VSPW ++ ++ P+ + +PR KKLR
Sbjct: 356 PDLLQNVERVSPWLVELVPNMLPVHLSPFSTVTPR-KKLR 394
>gi|400269961|gb|AFP74915.1| auxin response factor 10 [Brassica napus]
Length = 703
Score = 249 bits (637), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 154/416 (37%), Positives = 205/416 (49%), Gaps = 56/416 (13%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LW ACAG + +P + V YFPQGH E + F VP P I C+V V+
Sbjct: 10 QLWQACAGSMVQIPSLNSTVFYFPQGHAEHAHAPPDFHAPRVP-----PLILCRVASVKF 64
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
LA+ E DEVY+++ LLP P L+LE + L + G P F KTLT S
Sbjct: 65 LADAETDEVYSKITLLPLPG-NDLDLENDAVLGLTPSPDVNG----NEKPASFAKTLTQS 119
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + GGFSVPR AE FP LDY + P Q ++AKD+HG +FRHIYRG PRRHLLTT
Sbjct: 120 DANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETRKFRHIYRGTPRRHLLTT 179
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQ----PRNGLPDSILSKQNSYPNVL 295
GWS FV+QK L++GD+++FLR + GEL +GIRR+ + D+ + N YP
Sbjct: 180 GWSTFVNQKKLIAGDSIVFLRSETGELCVGIRRAKRGGLGSNGLGSDNNNNSNNPYPGFS 239
Query: 296 SVVANAVSTKS--------------------------------------MFHVFYSPRAT 317
+ + T S F V Y PRA+
Sbjct: 240 GFLRDDEITTSKLMMMKRNGGNVNDANAPGGRVRVEAVAEAVARAACGQAFEVVYYPRAS 299
Query: 318 HADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKW 376
+F + + C G RFKM FE +DS G V+ + DP RWPNS W
Sbjct: 300 TPEFCVKASDVRSAMRIRWCSGMRFKMAFETEDSLRISWFMGTVSAVQVADPIRWPNSPW 359
Query: 377 RCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYP 432
R L V WDE + ++VSPW ++ ++P + + KKLR P D+P
Sbjct: 360 RLLQVAWDEPDLLQNVKRVSPWLVELVSNMPAIHLSPFSPRKKLRI---PQPFDFP 412
>gi|356545983|ref|XP_003541412.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 647
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 155/423 (36%), Positives = 210/423 (49%), Gaps = 66/423 (15%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPI-EVPNFDLQPQIFCKVVDVQ 118
+LWHACAG + +P V YFPQGH E F +VP F + C+VV V+
Sbjct: 21 QLWHACAGGMVQMPTVNTKVYYFPQGHAEHACGPVNFKTCPKVPPF-----VPCRVVAVK 75
Query: 119 LLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTA 178
+A+ E DEVY ++ L+P LN D+ D + G + T+ P F KTLT
Sbjct: 76 YMADPETDEVYAKLKLVP------LNAN-----DVDYDHDVIG-AETRDKPASFAKTLTQ 123
Query: 179 SDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLT 238
SD + GGFSVPR AE FP LDY P Q ++AKD+HG W+FRHIYRG PRRHLLT
Sbjct: 124 SDANNGGGFSVPRYCAETIFPRLDYSADPPVQNILAKDVHGETWKFRHIYRGTPRRHLLT 183
Query: 239 TGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQP---------------------- 276
TGWS FV+ K LV+GD+++FLR ++G+L +GIRR+ +
Sbjct: 184 TGWSTFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKKGIGGGLETSSGWNPAGGNFPMPY 243
Query: 277 ---------------RNGLPD------SILSKQNSYPNVLSVVANAVSTKSMFHVFYSPR 315
RNG + S++ K P + AN + K F V Y PR
Sbjct: 244 SGFSPFLREDDNRILRNGNSNGLNPSVSMMGKGKVRPEAIIEAANLAANKKPFEVVYYPR 303
Query: 316 ATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNS 374
A+ +F + + G RFKM FE +DS G ++ + DP WPNS
Sbjct: 304 ASTPEFCVKASLVEAAMQTRWYSGIRFKMAFETEDSSRISWFMGTISSVQVADPLNWPNS 363
Query: 375 KWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS-SPRMKKLRTGLQAPPPDYPV 433
WR L V WDE + +VSPW ++ ++P + SP KKLR PD+P+
Sbjct: 364 PWRLLQVTWDEPDLLQNVRRVSPWLVELVSNMPAIHFSPFSPPRKKLRLPQH---PDFPL 420
Query: 434 SAR 436
+
Sbjct: 421 DGQ 423
Score = 40.8 bits (94), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 8/78 (10%)
Query: 683 KVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEG--LLRDPAKGWRILYTDSENDVMV 740
KV + VGR +DL L Y++L +L +F +E +L R+LY DS +
Sbjct: 565 KVFMESEDVGRTMDLSLLRSYDELHRKLADMFGIEKSEMLS------RVLYCDSVGAIKH 618
Query: 741 VGDDPWHEFCNEVSKIHI 758
+GD+P+ +F ++ I
Sbjct: 619 IGDEPFSDFTRTAKRLTI 636
>gi|242062386|ref|XP_002452482.1| hypothetical protein SORBIDRAFT_04g026610 [Sorghum bicolor]
gi|241932313|gb|EES05458.1| hypothetical protein SORBIDRAFT_04g026610 [Sorghum bicolor]
Length = 708
Score = 249 bits (635), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 155/404 (38%), Positives = 206/404 (50%), Gaps = 53/404 (13%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQ---VASSSAFPPIEVPNFDLQPQIFCKVVD 116
+LW ACAG + ++P G V YFPQGH E +A ++ VP + C+V
Sbjct: 22 QLWLACAGGMCTVPPVGASVYYFPQGHAEHALGLAGTADLSAARVPAL-----VPCRVAA 76
Query: 117 VQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTL 176
V+ +A+ + DEV+ ++ L+P L G +A LED DE+ P F KTL
Sbjct: 77 VRYMADPDTDEVFARIRLVP---LRGGEADAGGLEDDAADEQ--------EKPASFAKTL 125
Query: 177 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHL 236
T SD + GGFSVPR AE FP LDY P Q +VAKD+HG W+FRHIYRG PRRHL
Sbjct: 126 TQSDANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGAAWKFRHIYRGTPRRHL 185
Query: 237 LTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQ-------------PRNGLPD- 282
LTTGWS FV+QK LV+GD+++FLRG G+L +GIRR+ + P G
Sbjct: 186 LTTGWSTFVNQKKLVAGDSIVFLRGDSGDLHVGIRRAKRGFCGAGGGGGEEAPSPGWDHY 245
Query: 283 SILSKQNSYPNVLSVVANAVSTKSM------------FHVFYSPRATHADFVIPYQKYVK 330
+ L + N P + V + + F Y PRA+ +F +
Sbjct: 246 AGLMRGNVSPCAAAKARGKVRPEDVAEAARLAAAGQSFEAVYYPRASTPEFCVRAAAVRA 305
Query: 331 IIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGS 389
+ G RFKM FE +DS G V G+ DP RWP S WR L V WDE
Sbjct: 306 AMRVQWSPGMRFKMAFETEDSSRISWFMGTVAGVQVTDPIRWPQSPWRLLQVTWDEPDLL 365
Query: 390 DHQEQVSPWEIDRSVSLPPLSIQS-SPRMKKLRTGLQAPPPDYP 432
+ ++VSPW ++ S+P + + S SP KK R P YP
Sbjct: 366 QNVKRVSPWLVELVSSMPAIHLASFSPPRKKPRI------PAYP 403
Score = 45.4 bits (106), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 683 KVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGL-LRDPAKGWRILYTDSENDVMVV 741
KV + VGR +DL L+ +++L L +F +EG LR R+LY + +V
Sbjct: 626 KVFVESDTVGRNLDLSALSSFDELYRRLSEMFGIEGAELRS-----RVLYRCATGEVKHA 680
Query: 742 GDDPWHEFCNEVSKIHIYT 760
GD+P+ +F ++ I T
Sbjct: 681 GDEPFSDFVRSARRLTILT 699
>gi|357140673|ref|XP_003571888.1| PREDICTED: auxin response factor 22-like [Brachypodium distachyon]
Length = 705
Score = 248 bits (632), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 163/417 (39%), Positives = 209/417 (50%), Gaps = 63/417 (15%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIE----VPNFDLQPQIFCKVV 115
+LWHACAG + +P + V YFPQGH E S E V L + C V
Sbjct: 32 QLWHACAGGMVQMPPARSRVYYFPQGHAEHANSGGGGAAAELAATVGPRLLPALVLCSVA 91
Query: 116 DVQLLANKENDEVYTQVALLPQP-------ELEGLN-LEAKQLEDLGVDEEGGGRSPTKS 167
V+ LA+ E DEV+ ++ L+P E EGL LEA+ E L
Sbjct: 92 GVRFLADPETDEVFAKIRLVPVGPDEVAFREPEGLGPLEAEAQEKLA------------- 138
Query: 168 TPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHI 227
F KTLT SD + GGFSVPR AE FP LDY+ P Q ++AKD+HG W+FRHI
Sbjct: 139 ---SFAKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHI 195
Query: 228 YRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNG-------- 279
YRG PRRHLLTTGWS FV+QK LV+GD+++FLR + GEL +GIRR+ + G
Sbjct: 196 YRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVTCGGMECVSGW 255
Query: 280 -----------LPDSILSKQNSYPNVLS-----VVANAVSTKSM------FHVFYSPRAT 317
L D NS L +A+ V S+ F V Y PRA+
Sbjct: 256 NAPGYGGFSAFLKDEENKMMNSTGGYLKGRGKLKIADVVEAASLAANGQPFEVVYYPRAS 315
Query: 318 HADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKW 376
+FV+ + C G RFKM FE +DS G ++ + DP RWPNS W
Sbjct: 316 TPEFVVKAASMQAAMRIHWCPGMRFKMAFETEDSSRISWFMGTISSVQVADPIRWPNSPW 375
Query: 377 RCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS-SPRMKKLRTGLQAPPPDYP 432
R L V WDE + + VSPW ++ S+PP+ + SP KKLR PD+P
Sbjct: 376 RLLQVSWDEPDLLQNVKCVSPWLVELVSSIPPIHLGPFSPPRKKLRVPQH---PDFP 429
>gi|326496483|dbj|BAJ94703.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 709
Score = 246 bits (629), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 156/415 (37%), Positives = 209/415 (50%), Gaps = 56/415 (13%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP------PIEVPNFDLQPQIFCK 113
+LWHACAG + +P + V YFPQGH E A P +P + C
Sbjct: 34 QLWHACAGGMVQMPPARSRVYYFPQGHAEHANGGGAAELAAAVGPRPLPAL-----VLCC 88
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHM-- 171
V V+ LA+ + DEV+ ++ L+P E E + L LG D P ++ +
Sbjct: 89 VAGVRFLADPDTDEVFAKIRLVPVGPGEAGFREPEGLGPLGSD-------PPEAREKLSS 141
Query: 172 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQ 231
F KTLT SD + GGFSVPR AE FP LDY+ P Q ++AKD+HG W+FRHIYRG
Sbjct: 142 FAKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRGT 201
Query: 232 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSV----------------- 274
PRRHLLTTGWS FV+QK LV+GD+++FLR + GEL +GIRR+
Sbjct: 202 PRRHLLTTGWSTFVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVTCGGMECISGWNAPG 261
Query: 275 -------------QPRNGLPDSILSKQNSYPNVLSVVANAVSTKSM-FHVFYSPRATHAD 320
+ NG P + + V A ++ S F V Y PRA+ +
Sbjct: 262 YGGFSAFLKDEENKMMNGGPAGYVKGRGKVKIADVVEAATLAANSQPFEVVYYPRASTPE 321
Query: 321 FVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCL 379
FV+ + C G RFKM FE +DS G ++ + DP RWPNS WR L
Sbjct: 322 FVVKAAAMQAAMRIHWCPGMRFKMAFETEDSSRISWFMGTISSVQVADPLRWPNSPWRLL 381
Query: 380 MVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS-SPRMKKLRTGLQAPPPDYPV 433
V WDE + + VSPW ++ S+PP+ + SP KKLR PD+P+
Sbjct: 382 QVTWDEPDLLQNVKCVSPWLVELVSSIPPIHLGPFSPPRKKLRVPQH---PDFPL 433
>gi|259490000|ref|NP_001159132.1| uncharacterized protein LOC100304210 [Zea mays]
gi|223942161|gb|ACN25164.1| unknown [Zea mays]
gi|295844278|gb|ADG43136.1| auxin response factor 2 [Zea mays]
gi|407232686|gb|AFT82685.1| ARF2 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|414871040|tpg|DAA49597.1| TPA: auxin response factor 2 [Zea mays]
Length = 681
Score = 246 bits (628), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 164/453 (36%), Positives = 221/453 (48%), Gaps = 61/453 (13%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAG + +P + V YFPQGH E A L + C V V+
Sbjct: 13 QLWHACAGGMVQMPPVRSRVYYFPQGHAEHAHGGGAA--DLAGARALPSLVLCSVTGVRF 70
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
LA+ E DEV+ ++ L+P E +E ++ ++ VD + + F KTLT S
Sbjct: 71 LADPETDEVFAKIRLVPVAPGE---VEFREPDEFSVDP-----ADAREKLSSFAKTLTQS 122
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + GGFSVPR AE FP LDY+ P Q ++AKD+HG W+FRHIYRG PRRHLLTT
Sbjct: 123 DANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTT 182
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNG-------------------L 280
GWS FV+QK LV+GD+++FLR + GEL +GIRR + G L
Sbjct: 183 GWSTFVNQKKLVAGDSIVFLRTEHGELCVGIRRVKRVSCGGMECMSGWNAPGYGALSAFL 242
Query: 281 PD---SILSKQNSYPN-----VLSVVANAVSTKSM---FHVFYSPRATHADFVIPYQKYV 329
D ++ Y ++ V NA S + F V Y PRA+ +FV+
Sbjct: 243 KDEEGKMMKSHGGYMRGRGKVKITDVVNAASLAASGQPFEVVYYPRASTPEFVVKAASVQ 302
Query: 330 KIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIG 388
+ N C G RFKM FE +DS G + DP RWPNS WR L V WDE
Sbjct: 303 NAMRNQWCPGMRFKMAFETEDSSRISWFMGTIASAQVADPIRWPNSPWRLLQVAWDEPDL 362
Query: 389 SDHQEQVSPWEIDRSVSLPPLSIQS-SPRMKKLRTGLQAPPPDYPVSAR----------- 436
+ + V+PW ++ S+PP+ + SP KKLR PD+P +
Sbjct: 363 LQNVKCVNPWLVEIVSSIPPIHLGPFSPPRKKLRVPHH---PDFPFDGQLLNPIFHGNPL 419
Query: 437 ----GGGVLDFEESVRSSKVLQGQENVGFVSPL 465
GGG L + + + QG + F PL
Sbjct: 420 GPSNGGGALRCFSDIAPAGI-QGARHAQFGLPL 451
>gi|449464378|ref|XP_004149906.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
gi|449490399|ref|XP_004158594.1| PREDICTED: auxin response factor 18-like [Cucumis sativus]
Length = 703
Score = 246 bits (628), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 157/402 (39%), Positives = 214/402 (53%), Gaps = 47/402 (11%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAG L LP + VVYFPQGH E + F +P+ I C+V ++
Sbjct: 18 QLWHACAGGLIQLPTINSKVVYFPQGHTEHAQGNVDFGNARIPSI-----IPCRVSGIRH 72
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
+A+ E DEV+ ++ L P E NL+ + +DL + E ++ P F KTLT S
Sbjct: 73 MADPETDEVFAKIKLSPLANNE-FNLDNE--DDLLIHNE----LKSQDKPTSFAKTLTQS 125
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + GGFSVPR AE FP LDY + P Q ++AKD+HG W+FRHIYRG PRRHLLTT
Sbjct: 126 DANNGGGFSVPRYCAETIFPRLDYSVEPPVQTILAKDVHGEIWKFRHIYRGTPRRHLLTT 185
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQ-------------PRN------GL 280
GWS FV+QK LV+GD+++FLR + G+L +G+RR+ + P N G
Sbjct: 186 GWSSFVNQKKLVAGDSIVFLRAETGDLCIGVRRAKRGIGCGIDYSPGWNPTNSGSSLVGY 245
Query: 281 PDSI------LSKQNSYPN------VLSVVANAVSTKS--MFHVFYSPRATHADFVIPYQ 326
D + L ++NS N V SV+ A+ S F + Y P A +FV+
Sbjct: 246 SDYMRESEGRLGRRNSNGNLSGRVKVESVIEAAMLAASGQSFEIVYYPCAGTPEFVVKAS 305
Query: 327 KYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDE 385
+ RFKM FE +DS G V+ I DP RWP+S WR L V WDE
Sbjct: 306 SLRSAMQIHWYSAMRFKMPFETEDSSRISWFMGTVSSIQAADPIRWPDSPWRMLQVTWDE 365
Query: 386 CIGSDHQEQVSPWEIDRSVSLPPLSIQS-SPRMKKLRTGLQA 426
+ + V+PW ++ V++P + + SP KK R LQA
Sbjct: 366 PDLLQNVKSVNPWLVEVVVNMPAIHVSPFSPPRKKPRFPLQA 407
>gi|158563894|sp|Q01I35.2|ARFJ_ORYSI RecName: Full=Auxin response factor 10
gi|158563995|sp|Q7XKK6.3|ARFJ_ORYSJ RecName: Full=Auxin response factor 10
gi|218195228|gb|EEC77655.1| hypothetical protein OsI_16669 [Oryza sativa Indica Group]
Length = 699
Score = 246 bits (627), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 146/392 (37%), Positives = 203/392 (51%), Gaps = 47/392 (11%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVV 115
S+ +LW ACAG ++S+P G V YFPQGH EQ +++ VP P + C+VV
Sbjct: 18 SVDSQLWAACAGSMSSVPPVGAAVYYFPQGHAEQASAAVDLSSARVP-----PLVPCRVV 72
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSP---TKSTPHMF 172
V+ +A+ E+DEV+ ++ L+P + D+G R ++ P F
Sbjct: 73 AVRFMADAESDEVFAKIRLVPL-------RPGDAVVDVGEAAAAEARREEENSRPRPTSF 125
Query: 173 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQP 232
KTLT SD + GGFSVPR AE FP LDY + P Q + AKD+HGVEW FRHIYRG P
Sbjct: 126 AKTLTQSDANNGGGFSVPRFCAETIFPELDYSSEPPVQSVCAKDVHGVEWTFRHIYRGTP 185
Query: 233 RRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRS------------------- 273
RRHLLTTGWS FV++K L +GD+++F+R + G + +G+RR+
Sbjct: 186 RRHLLTTGWSPFVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGDDESLSSIPG 245
Query: 274 ------VQPRNGLPDSILSK---QNSYP--NVLSVVANAVSTKSMFHVFYSPRATHADFV 322
+ RN + + + P NVL+ A +T F V Y PRA+ +F
Sbjct: 246 WDQYRGLMRRNATATATGGRTPPKGKVPPENVLTAATRA-TTGQPFEVLYYPRASTPEFC 304
Query: 323 IPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMV 381
+ + C G RFKM FE +DS G V G+ DP RWP S WR L V
Sbjct: 305 VRAAAVRTAMAVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQASDPVRWPQSPWRLLQV 364
Query: 382 RWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS 413
WDE + ++V PW ++ S+P L + S
Sbjct: 365 TWDEPELLQNVKRVCPWLVELVSSMPNLHLPS 396
>gi|21741865|emb|CAD41455.1| OSJNBa0019D11.3 [Oryza sativa Japonica Group]
gi|38344647|emb|CAE05633.2| OSJNBb0061C13.15 [Oryza sativa Japonica Group]
gi|116310816|emb|CAH67605.1| OSIGBa0145G11.4 [Oryza sativa Indica Group]
Length = 695
Score = 246 bits (627), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 146/392 (37%), Positives = 203/392 (51%), Gaps = 47/392 (11%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVV 115
S+ +LW ACAG ++S+P G V YFPQGH EQ +++ VP P + C+VV
Sbjct: 14 SVDSQLWAACAGSMSSVPPVGAAVYYFPQGHAEQASAAVDLSSARVP-----PLVPCRVV 68
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSP---TKSTPHMF 172
V+ +A+ E+DEV+ ++ L+P + D+G R ++ P F
Sbjct: 69 AVRFMADAESDEVFAKIRLVPL-------RPGDAVVDVGEAAAAEARREEENSRPRPTSF 121
Query: 173 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQP 232
KTLT SD + GGFSVPR AE FP LDY + P Q + AKD+HGVEW FRHIYRG P
Sbjct: 122 AKTLTQSDANNGGGFSVPRFCAETIFPELDYSSEPPVQSVCAKDVHGVEWTFRHIYRGTP 181
Query: 233 RRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRS------------------- 273
RRHLLTTGWS FV++K L +GD+++F+R + G + +G+RR+
Sbjct: 182 RRHLLTTGWSPFVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGDDESLSSIPG 241
Query: 274 ------VQPRNGLPDSILSK---QNSYP--NVLSVVANAVSTKSMFHVFYSPRATHADFV 322
+ RN + + + P NVL+ A +T F V Y PRA+ +F
Sbjct: 242 WDQYRGLMRRNATATATGGRTPPKGKVPPENVLTAATRA-TTGQPFEVLYYPRASTPEFC 300
Query: 323 IPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMV 381
+ + C G RFKM FE +DS G V G+ DP RWP S WR L V
Sbjct: 301 VRAAAVRTAMAVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQASDPVRWPQSPWRLLQV 360
Query: 382 RWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS 413
WDE + ++V PW ++ S+P L + S
Sbjct: 361 TWDEPELLQNVKRVCPWLVELVSSMPNLHLPS 392
>gi|357150288|ref|XP_003575407.1| PREDICTED: auxin response factor 8-like [Brachypodium distachyon]
Length = 694
Score = 245 bits (626), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 154/404 (38%), Positives = 204/404 (50%), Gaps = 49/404 (12%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIF-CKVVDVQ 118
+LW ACAG + ++P G+ V YFPQGH E +A P V P + C+V V+
Sbjct: 22 QLWLACAGGMCTVPPVGSSVYYFPQGHAEHALGLAAAGP-GVGGLSRVPALLPCRVAAVR 80
Query: 119 LLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTA 178
+A+ + DEV+ + L+P + +++ G DEE P F KTLT
Sbjct: 81 YMADPDTDEVFAGIRLVPLRQ----DVQDDGAAAAGEDEE-------HEKPASFAKTLTQ 129
Query: 179 SDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLT 238
SD + GGFSVPR AE FP LDY P Q +VAKD+HG W+FRHIYRG PRRHLLT
Sbjct: 130 SDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVVAKDVHGASWKFRHIYRGTPRRHLLT 189
Query: 239 TGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSIL---SKQNSYP--- 292
TGWS FV+ K LV+GD+++FLRG G+L +GIRR+ + G + L Q Y
Sbjct: 190 TGWSAFVNHKKLVAGDSIVFLRGDAGDLHVGIRRAKRGFCGAEEGSLPGWENQQLYTMGP 249
Query: 293 -----NV----------------LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKI 331
NV ++ A + F V Y PRA+ +F +
Sbjct: 250 MRGGGNVSPSCKGGRRGKVRAEDVAEAARLAGSGQPFEVVYYPRASTPEFCVRAAAVRAA 309
Query: 332 IMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSD 390
+ C G RFKM FE +DS G V G+ DP RWP S WR L V WDE
Sbjct: 310 MRVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQVADPIRWPQSPWRLLQVTWDEPDLLQ 369
Query: 391 HQEQVSPWEIDRSVSLPPLSIQS--SPRMKKLRTGLQAPPPDYP 432
+ ++VSPW ++ S+P + + S SP KK R P YP
Sbjct: 370 NVKRVSPWLVELVSSMPAIHLASSFSPPRKKPRI------PAYP 407
>gi|341657336|gb|ADN92995.2| auxin response factor ARF16 [Ipomoea nil]
Length = 443
Score = 245 bits (626), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 155/408 (37%), Positives = 200/408 (49%), Gaps = 64/408 (15%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAG + +P + V YFPQGH E + F + + P I C+V V+
Sbjct: 12 QLWHACAGGMVQMPPMNSKVFYFPQGHAEHTLGNVDFSMLP----KIPPLILCRVGAVKY 67
Query: 120 LANKENDEVYTQVALLP----QPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKT 175
LA+ E DEVY ++ L+P +PE E L G S T P F KT
Sbjct: 68 LADVETDEVYAKIRLVPVGNNEPEFEDAVL-------------GSSASETAEKPTSFAKT 114
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
LT SD + GGFSVPR AE FP LDY P Q +VAKD+HG W+FRHIYRG PRRH
Sbjct: 115 LTQSDANNGGGFSVPRYCAETIFPRLDYTADPPVQTVVAKDVHGETWKFRHIYRGTPRRH 174
Query: 236 LLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRN-----------GLPDS- 283
LLTTGWS FV+QK LV+GD+++FLR +G+L +GIRR+ + N G P S
Sbjct: 175 LLTTGWSTFVNQKKLVAGDSIVFLRADNGDLCVGIRRAKRCGNIGLDAPSGWNTGAPGSY 234
Query: 284 ------------------ILSKQNS-----------YPNVLSVVANAVSTKSMFHVFYSP 314
I NS P + A +T F V Y P
Sbjct: 235 GGFSAYLREDENRIKRTGINGNPNSSGGGFKERGKVKPKSVIEAAYLAATGQPFEVVYYP 294
Query: 315 RATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPN 373
RA +F + + C G RFKM FE +DS G ++ + DP WPN
Sbjct: 295 RANTPEFCVRASSVNAAMGLQWCSGLRFKMPFETEDSSRISWFMGTISSVQVADPIHWPN 354
Query: 374 SKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS-SPRMKKL 420
S WR L V WDE + + VSPW ++ ++P + + SP KKL
Sbjct: 355 SPWRLLQVTWDEPDLLQNVKHVSPWLVELVSNMPMIHLSPFSPPRKKL 402
>gi|206572097|gb|ACI13681.1| putative auxin response factor ARF16 [Malus x domestica]
Length = 702
Score = 245 bits (626), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 163/485 (33%), Positives = 227/485 (46%), Gaps = 75/485 (15%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQP-QIFCKVVDVQ 118
+LWHACAG + +P V YFPQGH E P++ N P I C+V ++
Sbjct: 21 QLWHACAGGMVQMPPVNAKVFYFPQGHAEHACG-----PVDFRNCPRVPAHILCRVAAIK 75
Query: 119 LLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTA 178
+A+ DEVY ++ L+P LN ED G+ G +P K P F KTLT
Sbjct: 76 FMADPGTDEVYAKIRLVP------LNGAEAGYEDDGIGGLNGTETPDK--PASFAKTLTQ 127
Query: 179 SDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLT 238
SD + GGFSVPR AE FP LDY P Q ++AKD+HG W+FRHIYRG PRRHLLT
Sbjct: 128 SDANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWKFRHIYRGTPRRHLLT 187
Query: 239 TGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQ---------------------PR 277
TG S FV+ K LVSGD+++FLR ++G+L +GIRR+ + P
Sbjct: 188 TGSSTFVNHKKLVSGDSIVFLRAENGDLCVGIRRAKRGIGGGSESSSGWNPMGGNCTVPY 247
Query: 278 NGLP----------------------DSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPR 315
G S++ K P + A + F V Y PR
Sbjct: 248 GGFSAFLREDENKLMKNGHGNGSNSNGSLMGKGKVGPESVFEAATLAANGQPFEVVYYPR 307
Query: 316 ATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNS 374
A+ +F + + C G RFKM FE +DS G ++ + +P RWP S
Sbjct: 308 ASTPEFCVKASLVKAALQIRWCPGMRFKMAFETEDSSRISWFMGTISSVQVAEPLRWPES 367
Query: 375 KWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS-SPRMKKLRTGLQAPPPDYPV 433
WR L V WDE + ++VSPW ++ ++P + + SP KK+R PD+P
Sbjct: 368 PWRLLQVTWDEPDLLQNVKRVSPWLVELVSNMPAIHLTPFSPPRKKMRLPQH---PDFPF 424
Query: 434 SARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHPLGFEMRAPAHQSLALNGIR 493
+ S +L G SP +GC P G + AH L+L+ +
Sbjct: 425 EGQ------LPMPTFSGNLL------GPSSP-FGCLPDKTPAGMQGARHAHYGLSLSDMH 471
Query: 494 KDNIN 498
+ ++
Sbjct: 472 LNKLH 476
>gi|356543474|ref|XP_003540185.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 700
Score = 244 bits (623), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 175/505 (34%), Positives = 244/505 (48%), Gaps = 79/505 (15%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAG + +P + V YFPQGH E S+ F +P + P I C V V+
Sbjct: 11 QLWHACAGGMVQMPPVNSKVFYFPQGHAEHAQSNVDFGAARIP---IPPLILCCVAAVKF 67
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
LA+ E DEV+ ++ ++P E L+ E D +G G ++ P F KTLT S
Sbjct: 68 LADPETDEVFARLRMVPLRNSE-LDYE---------DSDGNGAEGSEK-PASFAKTLTQS 116
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + GGFSVPR AE FP LDY + P Q ++AKD+HG W+FRHIYRG PRRHLLTT
Sbjct: 117 DANNGGGFSVPRYCAETIFPRLDYSAEPPVQTVIAKDVHGEVWKFRHIYRGTPRRHLLTT 176
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPD----------------- 282
GWS FV+QK LV+GD+++FLR ++G+L +GIRR+ + G +
Sbjct: 177 GWSSFVNQKKLVAGDSIVFLRAENGDLCVGIRRAKRGGVGGAEGPCGWSSSGGGLGPGPG 236
Query: 283 --------------SILSKQN----------SYPNVLSVVANAVSTKSMFHVFYSPRATH 318
L +++ S +V V A S + F V Y PRA
Sbjct: 237 LGLGPGPGPYGAFSGFLREESKVVRSGRPKVSGESVREAVTLAASNQP-FEVVYYPRANT 295
Query: 319 ADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWR 377
+F I + G RFKM FE +DS G + + LDP RWPNS WR
Sbjct: 296 PEFCIRTSAVRGAMRIQWSSGMRFKMPFETEDSSRISWFMGTIASVQLLDPIRWPNSPWR 355
Query: 378 CLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS-SPRMKKLRTGLQAPPPDYPVSAR 436
L V WDE + ++VSPW ++ ++P + + SP KKLR P++P
Sbjct: 356 LLQVTWDEPDLLHNVKRVSPWLVELVSNVPIIHLAPFSPPRKKLRFPQH---PEFP---- 408
Query: 437 GGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHPLGFEMRAPAHQSLALNGIRKDN 496
LDF+ + S G S C + N P G + A ++L+ + +N
Sbjct: 409 ----LDFQFPIPS---FSGNPFGSSTSSPLCCLSDNAPAGIQGARHAQIGISLSDLHLNN 461
Query: 497 INELVRALPTS------YTGFVESN 515
+L LPT+ +TG N
Sbjct: 462 KLQL-GLLPTNVHQLNLHTGICNGN 485
>gi|62633605|gb|AAX89755.1| putative auxin response factor 10 [Gossypium raimondii]
Length = 417
Score = 244 bits (623), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 134/347 (38%), Positives = 186/347 (53%), Gaps = 41/347 (11%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIE-VPNFDLQPQIFCKVVDVQ 118
+LWHACAGP+ +P + V YFPQGH E ++ FP VP + C+V ++
Sbjct: 11 QLWHACAGPMVQIPPLNSKVFYFPQGHAEHSLAAVDFPSSPPVPAL-----VLCRVASLK 65
Query: 119 LLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTA 178
+A+ E DEVY ++ L+P P E L+ + + G D P F KTLT
Sbjct: 66 FMADTETDEVYAKILLMPLPNTE---LDLEHVAVFGSD--------NAEKPASFAKTLTQ 114
Query: 179 SDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLT 238
SD + GGFSVPR AE FPPLDY + P Q +VA D+HG W+FRHIYRG PRRHLLT
Sbjct: 115 SDANNGGGFSVPRYCAETIFPPLDYTEDPPVQTVVAVDVHGETWKFRHIYRGTPRRHLLT 174
Query: 239 TGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDS--------------- 283
TGWS FV+ K LV+GD+++FLR ++G L +GIRR+ + P++
Sbjct: 175 TGWSTFVNHKKLVAGDSIVFLRSENGGLCVGIRRAKRGTGNGPEAGSPFLSFLREDESKM 234
Query: 284 -ILSKQNSYPNVLSVVANAV-------STKSMFHVFYSPRATHADFVIPYQKYVKIIMNP 335
++++ + + A AV ++ F V Y PRA+ +F + + P
Sbjct: 235 MMMNRNGDWRGKGKLKAEAVLQAATLAASGQPFEVVYYPRASTPEFCVKASSVKAAMRVP 294
Query: 336 ICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMV 381
C G RFKM FE +DS G V+ + +DP RWPNS WR +
Sbjct: 295 WCCGMRFKMAFETEDSSRISWFMGTVSSVQVVDPIRWPNSPWRLFQL 341
>gi|356539348|ref|XP_003538160.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 697
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 178/513 (34%), Positives = 251/513 (48%), Gaps = 79/513 (15%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAG + +P+ + V YFPQGH E ++ + VP F I C V V+
Sbjct: 11 QLWHACAGGMVQMPQVHSKVFYFPQGHAEHAHTTI---DLRVPPF-----ILCNVEAVKF 62
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
+A+ E D+V+ +++L+P N E D ++ S + P F KTLT S
Sbjct: 63 MADPETDQVFAKLSLVPL-----RNSELGPDSDSAAGDDAAEPSSCEK-PASFAKTLTQS 116
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + GGFSVPR AE FP LD + P Q +VAKD+HG WRFRHIYRG PRRHLLTT
Sbjct: 117 DANNGGGFSVPRYCAETIFPRLDCTAEPPVQTVVAKDVHGETWRFRHIYRGTPRRHLLTT 176
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRS---VQPRNGL---------------P 281
GWS FV+QK LV+GD+V+FLR ++G+L +GIRR+ + +GL P
Sbjct: 177 GWSSFVNQKKLVAGDSVVFLRAENGDLCVGIRRAKKGIDEGSGLASSSVWSSASGSGIGP 236
Query: 282 DSILSKQNS--------------------YPNVLSVVANAVSTKSMFHVFYSPRATHADF 321
S K+ + +V+ V A S K+ F V Y PRA+ +F
Sbjct: 237 FSFFLKEENKMLRNGCGVGGNLSGRVKVRAEDVVEAVTLAASNKA-FEVVYYPRASTPEF 295
Query: 322 VIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLM 380
+ + C G RFKM FE +D+ G + + +DP WPNS WR L
Sbjct: 296 CVKASSVGAAMRIQWCSGMRFKMAFETEDATRISWFMGTIASVQVVDPICWPNSPWRLLQ 355
Query: 381 VRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS-SPRMKKLRTGLQAPPPDYPVSARGGG 439
V WDE + ++VSPW ++ ++P ++ SP KKLR PD+P
Sbjct: 356 VTWDEPDLLQNVKRVSPWLVELVSNIPLINFTPFSPPRKKLR----PQHPDFP------- 404
Query: 440 VLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHPLGFEMRAPAHQSLALNGIRKDNINE 499
LD + + +L G ++ G SPL G N P G + A +L+ + +N
Sbjct: 405 -LDVQFPI---PMLSGNQH-GPNSPLCGFSD-NAPAGIQGARHAQFGKSLSDLHLNNNKL 458
Query: 500 LVRALPTS-------YTGFVESNRFPKVLQGQE 525
+ LPT+ YTG N K + +E
Sbjct: 459 QLGMLPTNIHQLGGVYTGISSGNMMTKHDKSKE 491
>gi|297846440|ref|XP_002891101.1| hypothetical protein ARALYDRAFT_336503 [Arabidopsis lyrata subsp.
lyrata]
gi|297336943|gb|EFH67360.1| hypothetical protein ARALYDRAFT_336503 [Arabidopsis lyrata subsp.
lyrata]
Length = 578
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 123/299 (41%), Positives = 176/299 (58%), Gaps = 23/299 (7%)
Query: 113 KVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMF 172
+V+ +QL + +DE Y ++ L+P Q+ + E R S F
Sbjct: 39 RVIAIQLKVERNSDETYAEITLMPN---------TTQVV-IPTQNENQFRPLVNS----F 84
Query: 173 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQP 232
K LTASDTS HGGFSVPR+ A +C PPLD Q P+QEL+ DLHG +WRF+H YRG P
Sbjct: 85 TKVLTASDTSAHGGFSVPRKLAIECLPPLDMSQPLPAQELLTIDLHGNQWRFKHSYRGTP 144
Query: 233 RRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYP 292
RRHLLTTGW+ F++ K LV+GD ++FLRG+ GELR+ IRR+ + +P S++S ++
Sbjct: 145 RRHLLTTGWNAFITSKKLVAGDVIVFLRGETGELRVSIRRARYQQGNIPSSLISIESMRH 204
Query: 293 NVLSVVANAVSTKSMFHVFYSPRATH--------ADFVIPYQKYVKIIMNPICIGTRFKM 344
V++ +A + MF V Y PR + F++ Y K++ + N +G+RF M
Sbjct: 205 GVIASAKHAFDNQCMFIVVYKPRFIFCVCISIRSSQFIVNYDKFLDAVNNKFNVGSRFTM 264
Query: 345 RFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRS 403
RFE ++ ERR G + G++D P+ W S+WR L V+WDE ++VSPWEI S
Sbjct: 265 RFEEENFSERRYFGTIIGVSDFSPH-WKCSEWRSLKVQWDEFASFPRPDKVSPWEIKHS 322
Score = 110 bits (274), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 76/116 (65%), Gaps = 2/116 (1%)
Query: 658 KLFGF-SLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNM 716
K+FG + S S Q R+CTKV G +GRA+DL LNGY+ L+ ELE LF++
Sbjct: 461 KIFGLGQMRSTREIQSKQLSSTRTCTKVQMHGVTLGRALDLSVLNGYDQLILELEKLFDL 520
Query: 717 EGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGTT 772
+G L++ + W I++TD+E D M+VGDDPW EFCN V KI IY++EEV+ G +
Sbjct: 521 KGQLQNRNQ-WEIVFTDNEEDEMLVGDDPWPEFCNMVKKIIIYSKEEVKNFKSGNS 575
>gi|224069455|ref|XP_002326354.1| predicted protein [Populus trichocarpa]
gi|222833547|gb|EEE72024.1| predicted protein [Populus trichocarpa]
Length = 705
Score = 244 bits (622), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 149/412 (36%), Positives = 206/412 (50%), Gaps = 65/412 (15%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAG + +P + V YFPQGH E A P++ N C+V D++
Sbjct: 22 QLWHACAGGMVQMPAVNSKVFYFPQGHAEH-----ACEPVDFRNLPRVSHNLCRVSDIKF 76
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKST-PHMFCKTLTA 178
+A+ E DEV+ ++ L+P +N L+D V GG + + P F KTLT
Sbjct: 77 MADPETDEVFAKIRLVP------INSNELDLDDQEVAVNGGMEAAQDNNKPVSFAKTLTQ 130
Query: 179 SDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLT 238
SD + GGFSVPR AE FP LDY P Q L+AKD+HG W+FRHIYRG PRRHLLT
Sbjct: 131 SDANNGGGFSVPRYCAEMIFPRLDYTADPPVQTLLAKDVHGETWKFRHIYRGTPRRHLLT 190
Query: 239 TGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILS------------ 286
TGWS FV+ K L++GD+V+F R ++G+L +G+RR+ + G P+S+ +
Sbjct: 191 TGWSPFVNHKKLIAGDSVVFFRAENGDLCVGVRRAKRTSGGGPESLWNPAGGSSAVPSGG 250
Query: 287 -----KQNSYPNVLSVVANAVSTKSM--------------------------FHVFYSPR 315
+++ + + S N +KS F V Y PR
Sbjct: 251 FGAFLREDEHKLMRSASGNGNGSKSNESLMGQGKVRAESVIQAVTLAANGLPFEVVYYPR 310
Query: 316 ATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNS 374
A +F + + C G RFKM FE +DS G V + D WP+S
Sbjct: 311 ANTPEFCVKASLVKTAMQIRWCSGMRFKMAFETEDSSRISWFMGTVCSVQAADSLWWPHS 370
Query: 375 KWRCLMVRWDECIGSDHQEQVSPWEID-----RSVSLPPLSIQSSPRMKKLR 421
WR L V WDE + ++VSPW ++ ++ PP SSPR KKLR
Sbjct: 371 PWRLLQVTWDEPDLLQNVKRVSPWLVELASNMAAIHFPPF---SSPR-KKLR 418
>gi|19352051|dbj|BAB85919.1| auxin response factor 10 [Oryza sativa]
Length = 700
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 144/417 (34%), Positives = 205/417 (49%), Gaps = 50/417 (11%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAG + +P + V YFPQGH E P+E P + + C+V V+
Sbjct: 23 QLWHACAGGMVQMPPVSSKVYYFPQGHAEHAQGHG---PVEFPGGRVPALVLCRVAGVRF 79
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
+A+ + DEV+ ++ L+P N + + + + P F KTLT S
Sbjct: 80 MADPDTDEVFAKIRLVPVRA----NEQGYAGDADDGIGAAAAAAAQEEKPASFAKTLTQS 135
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + GGFSVPR AE FP LDY P Q ++AKD+HGV W+FRHIYRG PRRHLLTT
Sbjct: 136 DANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTT 195
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILS------------- 286
GWS FV+QK LV+GD+++F+R ++G+L +GIRR+ + G P+ +
Sbjct: 196 GWSTFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGVGGPEFLPPPPPPPPTPAAGGN 255
Query: 287 -------------------------KQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADF 321
+ P + AN + F V Y PRA+ +F
Sbjct: 256 YGGFSMFLRGDDDGNKMAAAARGKVRARVRPEEVVEAANLAVSGQPFEVVYYPRASTPEF 315
Query: 322 VIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLM 380
+ + G RFKM FE +DS G V+ + DP RWPNS WR L
Sbjct: 316 CVKAGAVRAAMRTQWFAGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSPWRLLQ 375
Query: 381 VRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS-SPRMKKLRTGLQAPPPDYPVSAR 436
V WDE + ++VSPW ++ ++P + + SP KKL L P+ P+ +
Sbjct: 376 VSWDEPDLLQNVKRVSPWLVELVSNMPAIHLAPFSPPRKKLCVPLY---PELPIDGQ 429
>gi|115469600|ref|NP_001058399.1| Os06g0685700 [Oryza sativa Japonica Group]
gi|75253259|sp|Q653H7.1|ARFR_ORYSJ RecName: Full=Auxin response factor 18; AltName: Full=OsARF10
gi|52076670|dbj|BAD45570.1| putative auxin response factor 10 [Oryza sativa Japonica Group]
gi|52077007|dbj|BAD46040.1| putative auxin response factor 10 [Oryza sativa Japonica Group]
gi|113596439|dbj|BAF20313.1| Os06g0685700 [Oryza sativa Japonica Group]
gi|215713413|dbj|BAG94550.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 700
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 144/417 (34%), Positives = 205/417 (49%), Gaps = 50/417 (11%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAG + +P + V YFPQGH E P+E P + + C+V V+
Sbjct: 23 QLWHACAGGMVQMPPVSSKVYYFPQGHAEHAQGHG---PVEFPGGRVPALVLCRVAGVRF 79
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
+A+ + DEV+ ++ L+P N + + + + P F KTLT S
Sbjct: 80 MADPDTDEVFAKIRLVPVRA----NEQGYAGDADDGIGAAAAAAAQEEKPASFAKTLTQS 135
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + GGFSVPR AE FP LDY P Q ++AKD+HGV W+FRHIYRG PRRHLLTT
Sbjct: 136 DANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLTT 195
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILS------------- 286
GWS FV+QK LV+GD+++F+R ++G+L +GIRR+ + G P+ +
Sbjct: 196 GWSTFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGVGGPEFLPPPPPPPPTPAAGGN 255
Query: 287 -------------------------KQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADF 321
+ P + AN + F V Y PRA+ +F
Sbjct: 256 YGGFSMFLRGDDDGNKMAAAARGKVRARVRPEEVVEAANLAVSGQPFEVVYYPRASTPEF 315
Query: 322 VIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLM 380
+ + G RFKM FE +DS G V+ + DP RWPNS WR L
Sbjct: 316 CVKAGAVRAAMRTQWFAGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSPWRLLQ 375
Query: 381 VRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS-SPRMKKLRTGLQAPPPDYPVSAR 436
V WDE + ++VSPW ++ ++P + + SP KKL L P+ P+ +
Sbjct: 376 VSWDEPDLLQNVKRVSPWLVELVSNMPAIHLAPFSPPRKKLCVPLY---PELPIDGQ 429
>gi|357443233|ref|XP_003591894.1| Auxin response factor [Medicago truncatula]
gi|355480942|gb|AES62145.1| Auxin response factor [Medicago truncatula]
Length = 619
Score = 243 bits (621), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 150/399 (37%), Positives = 206/399 (51%), Gaps = 56/399 (14%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAG + +P V YFPQGH E + F VP P I C++ ++
Sbjct: 19 QLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHNKVDFSKTRVP-----PLIPCRISAMKY 73
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
+A+ E DEVY ++ L P E E L+ E ED G ++ P F KTLT S
Sbjct: 74 MADPETDEVYVKMKLTPLRENE-LDFE----EDCFFGNNG---LESQEKPASFAKTLTQS 125
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + GGFSVPR AE FP LDY + P Q ++AKD+HG W+FRHIYRG PRRHLLTT
Sbjct: 126 DANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRRHLLTT 185
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRS---------------------VQP-- 276
GWS FV+ K LV+GD+++FLR ++G+L +GIRR+ V P
Sbjct: 186 GWSNFVNHKKLVAGDSIVFLRAENGDLCVGIRRAKKGGIGGGTDQFSNSSSTWNRVSPLF 245
Query: 277 --------------RNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFV 322
+NG D L + +V+ V AV+ +S F V Y PRA+ +F
Sbjct: 246 GGVGSGFLCGNDNRKNGCDD--LMGKVGAESVVEAVNCAVNGRS-FEVVYYPRASTPEFC 302
Query: 323 IPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMV 381
+ + C G RFKM FE +DS G ++ + DP RWP+S WR L V
Sbjct: 303 VKVSSVKSAMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVHVQDPIRWPDSPWRLLQV 362
Query: 382 RWDECIGSDHQEQVSPWEIDRSVSLPPLSIQ--SSPRMK 418
WDE + + V+PW ++ ++P ++ + PR K
Sbjct: 363 VWDEPDLLQNVKCVNPWLVELVSNMPNFNLSPFTPPRKK 401
>gi|295844304|gb|ADG43149.1| auxin response factor 15 [Zea mays]
Length = 711
Score = 242 bits (618), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 152/405 (37%), Positives = 206/405 (50%), Gaps = 51/405 (12%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQ---VASSSAFPPIEVPNFDLQPQIFCKVVD 116
+LW ACAG + ++P G V YFPQGH E +A ++ VP + C+V
Sbjct: 22 QLWLACAGGMCTVPPVGASVYYFPQGHAEHALGLAGAADLSAARVPAL-----VPCRVTA 76
Query: 117 VQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTL 176
V+ +A+ + DEV+ ++ L+P + +D +E + P F KTL
Sbjct: 77 VRYMADPDTDEVFARIRLVPLRGGDADADAGGVEDDAAAADE-------QEKPASFAKTL 129
Query: 177 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHL 236
T SD + GGFSVPR AE FP LDY P Q +VAKD+HG W+FRHIYRG PRRHL
Sbjct: 130 TQSDANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGAAWKFRHIYRGTPRRHL 189
Query: 237 LTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQ-------------PRNGLPD- 282
LTTGWS FV+QK LV+GD+++FLRG G+L +GIRR+ + P G
Sbjct: 190 LTTGWSTFVNQKKLVAGDSIVFLRGDSGDLHVGIRRAKRGFCGAGGGGGDDSPAAGWDHY 249
Query: 283 SILSKQNSYPNVLSVVANAVSTKSM------------FHVFYSPRATHADFVIPYQKYVK 330
+ L + N P + V + + F V Y PRA+ +F + V+
Sbjct: 250 AGLMRGNVSPCAAAKARGKVRPEDVAEAARLAAAGQSFEVVYYPRASTPEFCV-RAAAVR 308
Query: 331 IIMN-PICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIG 388
+ M G RFKM FE +DS G V G+ DP RWP S WR L V WDE
Sbjct: 309 VAMRVQWSPGMRFKMAFETEDSSRISWFMGTVAGVQVTDPIRWPQSPWRLLQVTWDEPDL 368
Query: 389 SDHQEQVSPWEIDRSVSLPPLSIQS-SPRMKKLRTGLQAPPPDYP 432
+ ++VSPW ++ S+P + + S SP KK R P YP
Sbjct: 369 LQNVKRVSPWLVELVSSMPAIHLASFSPPRKKPRI------PAYP 407
>gi|295844312|gb|ADG43153.1| auxin response factor 19 [Zea mays]
gi|413934598|gb|AFW69149.1| hypothetical protein ZEAMMB73_407032 [Zea mays]
Length = 716
Score = 242 bits (618), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 152/436 (34%), Positives = 213/436 (48%), Gaps = 70/436 (16%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAG + +P + V YFPQGH E P+++P + + C+V V+
Sbjct: 14 QLWHACAGGMVQMPAVHSKVYYFPQGHAEHAQG-----PVDLPAGRVPALVLCRVAAVRF 68
Query: 120 LANKENDEVYTQVALLP-QPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTA 178
+A+ + DEV+ ++ L P +P G +A +E P F KTLT
Sbjct: 69 MADPDTDEVFAKIRLAPVRPNEPGYADDAIGAAAASGAQE--------DKPASFAKTLTQ 120
Query: 179 SDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLT 238
SD + GGFSVPR AE FP LDY P Q ++AKD+HGV W+FRHIYRG PRRHLLT
Sbjct: 121 SDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLT 180
Query: 239 TGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSI-------------- 284
TGWS FV+QK LV+GD+++F+R ++G+L +GIRR+ + G P+ +
Sbjct: 181 TGWSTFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGIGGPEFMHHHHQQPPPPQGGG 240
Query: 285 --------------------------LSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATH 318
++ P + AN + F V Y PRA+
Sbjct: 241 YAGFSMFLRGEEDGGKMMAAAATRGKAARVRVRPEEVVEAANLAVSGQPFEVVYYPRAST 300
Query: 319 ADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWR 377
+F + + C G RFKM FE +DS G V+ + DP RWPNS WR
Sbjct: 301 PEFCVKAGAVRAAMRTQWCPGMRFKMAFETEDSSRISWFMGTVSAVHVADPIRWPNSPWR 360
Query: 378 CLMVRWDECIGSDHQEQVSPWEIDRSVSLPPL----SIQSSPRMKKLRTGL--------Q 425
L V WDE + ++VSPW ++ ++P + + SP KKL L Q
Sbjct: 361 LLQVAWDEPDLLQNVKRVSPWLVELVSNMPVIHHLTATPFSPPRKKLCVPLYPELPLEGQ 420
Query: 426 APPPDY---PVSARGG 438
P P + P+ RGG
Sbjct: 421 FPAPMFHGSPLLGRGG 436
>gi|413923141|gb|AFW63073.1| hypothetical protein ZEAMMB73_321944 [Zea mays]
Length = 689
Score = 242 bits (617), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 152/405 (37%), Positives = 206/405 (50%), Gaps = 51/405 (12%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQ---VASSSAFPPIEVPNFDLQPQIFCKVVD 116
+LW ACAG + ++P G V YFPQGH E +A ++ VP + C+V
Sbjct: 22 QLWLACAGGMCTVPPVGASVYYFPQGHAEHALGLAGAADLSAARVPAL-----VPCRVTA 76
Query: 117 VQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTL 176
V+ +A+ + DEV+ ++ L+P + +D +E + P F KTL
Sbjct: 77 VRYMADPDTDEVFARIRLVPLRGGDADADAGGVEDDAAAADE-------QEKPASFAKTL 129
Query: 177 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHL 236
T SD + GGFSVPR AE FP LDY P Q +VAKD+HG W+FRHIYRG PRRHL
Sbjct: 130 TQSDANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGAAWKFRHIYRGTPRRHL 189
Query: 237 LTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQ-------------PRNGLPD- 282
LTTGWS FV+QK LV+GD+++FLRG G+L +GIRR+ + P G
Sbjct: 190 LTTGWSTFVNQKKLVAGDSIVFLRGDSGDLHVGIRRAKRGFCGAGGGGGDDSPAAGWDHY 249
Query: 283 SILSKQNSYPNVLSVVANAVSTKSM------------FHVFYSPRATHADFVIPYQKYVK 330
+ L + N P + V + + F V Y PRA+ +F + V+
Sbjct: 250 AGLMRGNVSPCAAAKARGKVRPEDVAEAARLAAAGQSFEVVYYPRASTPEFCV-RAAAVR 308
Query: 331 IIMN-PICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIG 388
+ M G RFKM FE +DS G V G+ DP RWP S WR L V WDE
Sbjct: 309 VAMRVQWSPGMRFKMAFETEDSSRISWFMGTVAGVQVTDPIRWPQSPWRLLQVTWDEPDL 368
Query: 389 SDHQEQVSPWEIDRSVSLPPLSIQS-SPRMKKLRTGLQAPPPDYP 432
+ ++VSPW ++ S+P + + S SP KK R P YP
Sbjct: 369 LQNVKRVSPWLVELVSSMPAIHLASFSPPRKKPRI------PAYP 407
>gi|413943303|gb|AFW75952.1| hypothetical protein ZEAMMB73_807339 [Zea mays]
Length = 700
Score = 242 bits (617), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 163/450 (36%), Positives = 216/450 (48%), Gaps = 65/450 (14%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLE--QVASSSAFPPIEVPNFDLQPQIFCKVVDV 117
+LWHACAG + +P + V YFPQGH E Q + + P VP + C+V V
Sbjct: 24 QLWHACAGGMVQMPPVHSRVYYFPQGHAEHAQGHAHADLPAGRVPAL-----VLCRVDAV 78
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ LA+ + DEV +V L P E + +A G R + P F KTLT
Sbjct: 79 RFLADPDTDEVLARVRLAPVRPNEPDHADAA---------APGAR---EDKPASFAKTLT 126
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
SD + GGFSVPR AE FP LDY P Q ++AKD+HGV W+FRHIYRG PRRHLL
Sbjct: 127 QSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLL 186
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQ---------PRNGLPDSILSKQ 288
TTGWS FV+QK LV+GD+++F+R +G+L +GIRR+ + P + PD
Sbjct: 187 TTGWSAFVNQKRLVAGDSIVFMRTGNGDLCVGIRRAKKGGIGGGPEFPHHQPPDGGGYGY 246
Query: 289 NSY------------------------PNVLSVVANAVSTKSMFHVFYSPRATHADFVIP 324
P + AN ++ F V Y PRA+ +F +
Sbjct: 247 GYAGFSTFLRGEEDDAAARGKVRVLVRPEEVVEAANLAASGQPFEVVYYPRASTPEFCVK 306
Query: 325 YQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMVRW 383
+ C G RFKM FE +DS G V + DP RWPNS WR L V W
Sbjct: 307 AGAVRAAMRTQWCAGMRFKMAFETEDSSRISWFMGTVAAVQVADPIRWPNSPWRLLQVAW 366
Query: 384 DECIGSDHQEQVSPWEIDRSVSLPP---LSIQSSPRMKKL-----RTGLQAPPPDY---P 432
DE + ++VSPW ++ S P L+ S P KKL G Q P P + P
Sbjct: 367 DEPDLLQNVKRVSPWLVELVSSTPAIHHLTPFSPPSRKKLCIPLYPEGHQLPAPMFHGSP 426
Query: 433 VSARGGGVLD-FEESVRSSKVLQGQENVGF 461
+ RG G + F + +QG + F
Sbjct: 427 LVGRGVGPMRYFPDGGTPPAGIQGARHAQF 456
>gi|147834267|emb|CAN63853.1| hypothetical protein VITISV_024151 [Vitis vinifera]
Length = 680
Score = 241 bits (616), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 157/432 (36%), Positives = 218/432 (50%), Gaps = 76/432 (17%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAG + +P + VVYFPQGH E A+ ++ N + P + C+V V+
Sbjct: 11 QLWHACAGGMVHMPSLNSRVVYFPQGHAEH-----AYGNVDFGNPRIPPLVLCRVSAVKY 65
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
LA+ E+DEVY ++ L+P EG + ED + G +P K P F KTLT S
Sbjct: 66 LADPESDEVYAKIRLIPLRNTEG------ETEDDVLMGGNGIEAPEK--PASFAKTLTQS 117
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + GGFSVPR AE FP LDY P Q ++AKD+HG WRFRHIYRG PRRHLLTT
Sbjct: 118 DANNGGGFSVPRYCAETIFPRLDYSADPPVQTILAKDVHGETWRFRHIYRGTPRRHLLTT 177
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDS---------------- 283
GWS FV++KNLV+GD+++FLR ++G+L +GIRR+ + G P+S
Sbjct: 178 GWSNFVNKKNLVAGDSIVFLRAENGDLCVGIRRAKRAGCG-PESPSGWNPASGNGTSPYR 236
Query: 284 -------------ILSKQNS-YPNVLSVVANAVSTKSM-------FHVFYSPRATHADFV 322
IL+ N+ + V A +V+ + F + Y PRA+ +F
Sbjct: 237 GYSGFLREDENRPILTHSNAGFRGKGRVRAESVAEAATLAANGQPFVIVYYPRASTPEFC 296
Query: 323 IPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWR---- 377
+ + C G +FKM FE DDS G ++ + DP RWPNS WR
Sbjct: 297 VKASSVRAAMQIQWCPGMKFKMAFETDDSSRISWFMGNISSVHVNDPIRWPNSPWRLLQV 356
Query: 378 -------------------CLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS-SPRM 417
L V WDE + ++V+PW ++ +P + + SP
Sbjct: 357 LEYEIQKIVSSHLNTLCKLILQVTWDEPDLLQNVKRVNPWLVELVSHVPSIHLSPFSPPR 416
Query: 418 KKLRTGLQAPPP 429
KKLR Q+ P
Sbjct: 417 KKLRLQQQSEFP 428
>gi|242093966|ref|XP_002437473.1| hypothetical protein SORBIDRAFT_10g027790 [Sorghum bicolor]
gi|241915696|gb|EER88840.1| hypothetical protein SORBIDRAFT_10g027790 [Sorghum bicolor]
Length = 709
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 153/436 (35%), Positives = 210/436 (48%), Gaps = 63/436 (14%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAG + +P + V YFPQGH E P +++P + + C+V V+
Sbjct: 23 QLWHACAGGMVQMPPVHSKVYYFPQGHAEHAQG----PVVDLPAGRVPALVLCRVAAVRF 78
Query: 120 LANKENDEVYTQVALLP-QPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTA 178
+A+ + DEV+ ++ L P +P G +A + P F KTLT
Sbjct: 79 MADPDTDEVFAKIRLAPVRPNEPGYAADADDAIGAAAAGG----GAQEDKPASFAKTLTQ 134
Query: 179 SDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLT 238
SD + GGFSVPR AE FP LDY P Q ++AKD+HGV W+FRHIYRG PRRHLLT
Sbjct: 135 SDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLT 194
Query: 239 TGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSY------- 291
TGWS FV+QK LV+GD+++F+R ++G+L +GIRR+ + G P+ + Q
Sbjct: 195 TGWSTFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGIGGPEFLHHHQPPPPPGGGGY 254
Query: 292 ----------------------------------PNVLSVVANAVSTKSMFHVFYSPRAT 317
P + AN + F V Y PRA+
Sbjct: 255 AGFSMFLRGGEEDGSKMMATGAATRGNKVRVRVRPEEVVEAANLAVSGQPFEVVYYPRAS 314
Query: 318 HADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKW 376
+F + + C G RFKM FE +DS G V+ + DP RWPNS W
Sbjct: 315 TPEFCVKAGAVRAAMRTQWCAGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSPW 374
Query: 377 RCLMVRWDECIGSDHQEQVSPWEIDRSVSLPP---LSIQSSPRMKKL---------RTGL 424
R L V WDE + ++VSPW ++ ++P L+ S P KKL G
Sbjct: 375 RLLQVAWDEPDLLQNVKRVSPWLVELVSNMPAIHHLTPFSPPPRKKLCVPLYPELPLEGH 434
Query: 425 QAPPPDYPVSARGGGV 440
Q P P + S G GV
Sbjct: 435 QFPAPMFHGSPLGRGV 450
>gi|295844290|gb|ADG43142.1| auxin response factor 8 [Zea mays]
Length = 707
Score = 241 bits (615), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 156/410 (38%), Positives = 205/410 (50%), Gaps = 63/410 (15%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVAS-------SSAFPPIEVPNFDLQPQIFC 112
+LW ACAG + ++P G V YFPQGH E S+A P VP C
Sbjct: 22 QLWLACAGSMCTVPLVGASVCYFPQGHAEHALGLDGAADLSAARVPALVP---------C 72
Query: 113 KVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLED--LGVDEEGGGRSPTKSTPH 170
+V V+ +A+ + DEV+ ++ L+P L G A L+D DE+ P
Sbjct: 73 RVTAVRYMADPDTDEVFARIRLVP---LRGGEAHAGGLDDDVAAADEQ--------EKPA 121
Query: 171 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRG 230
F KTLT SD + GGFSVPR AE FP LDY P Q +VAKD+HG W+FRHIYRG
Sbjct: 122 SFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYAADPPVQNVVAKDVHGTAWKFRHIYRG 181
Query: 231 QPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQ-------------PR 277
PRRHLLTTGWS FV+QK L++GD+++FLRG G+L +GIRR+ + P
Sbjct: 182 TPRRHLLTTGWSTFVNQKKLIAGDSIVFLRGDSGDLHVGIRRAKRGFCGAGGGGGDEAPT 241
Query: 278 NGLPD-SILSKQNSYPNVLSVVANAVSTKSM------------FHVFYSPRATHADFVIP 324
G + L + N P + V + + F V Y PRA+ +F +
Sbjct: 242 PGWHHYAGLIRGNVSPCAAAKARGKVRPEDVAEAARLAAAGQSFEVVYYPRASTPEFCVR 301
Query: 325 YQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMVRW 383
+ G RFKM FE +DS G V G+ DP RWP S WR L V W
Sbjct: 302 AAAVRAAMRVQWSPGMRFKMAFETEDSSRISWFMGTVAGVQVTDPIRWPQSPWRLLQVTW 361
Query: 384 DECIGSDHQEQVSPWEIDRSVSLPPLSIQS-SPRMKKLRTGLQAPPPDYP 432
DE + ++VSPW ++ S+P + + S SP KK R P YP
Sbjct: 362 DEPDLLQNVKRVSPWLVELVSSMPAIHLASFSPPRKKPRI------PAYP 405
Score = 46.2 bits (108), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 40/79 (50%), Gaps = 6/79 (7%)
Query: 683 KVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGL-LRDPAKGWRILYTDSENDVMVV 741
KV + VGR +DL L +++L L +F +EG +R R+LY + +V
Sbjct: 625 KVFVESDTVGRNLDLSALGSFDELYGRLSEMFGVEGAEMRS-----RVLYRGATGEVRHA 679
Query: 742 GDDPWHEFCNEVSKIHIYT 760
GD+P+ +F +I I T
Sbjct: 680 GDEPFSDFVKSARRITILT 698
>gi|255559342|ref|XP_002520691.1| transcription factor, putative [Ricinus communis]
gi|223540076|gb|EEF41653.1| transcription factor, putative [Ricinus communis]
Length = 634
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 135/362 (37%), Positives = 199/362 (54%), Gaps = 58/362 (16%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKVV 115
+Y ELW ACAGPL +P+ G VVY+PQGH+EQV A + +E+P ++L +IFCKV+
Sbjct: 44 LYKELWRACAGPLVYVPRAGEKVVYYPQGHMEQVEAYMNQDGKMEMPVYNLPSKIFCKVI 103
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRS-PTKSTPHMFCK 174
+VQL A DEV+ Q+ LLP+ + + L+L+ E+G P K+ F K
Sbjct: 104 NVQLKAEAGTDEVFAQITLLPETKQDVLSLK----------EDGNSLPLPRKADLRSFSK 153
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
LT+SDTSTHGGFSV +R AE+C PP+D + P Q LVAKD+H
Sbjct: 154 KLTSSDTSTHGGFSVLKRHAEECLPPMDMSGEPPEQMLVAKDMH---------------- 197
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
G++GELR+G+RR+++ + S++S + +
Sbjct: 198 --------------------------GENGELRIGLRRAMKLHSNASTSVISAHSMQHGI 231
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
LS+ +A++T S+F V+Y P +F+IP+ +YV+ +GT F M FE+++ E+
Sbjct: 232 LSMAFHAITTGSIFTVYYRPWTNPTEFIIPFDQYVESAELEYSVGTTFGMLFEVEECAEQ 291
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECI-GSDHQEQVSPWEIDRSVSLPPLSIQS 413
R G + G D+D RWPNS+WR L +WD G H ++VSPW I V + P+
Sbjct: 292 RSEGTIVGNEDVDHIRWPNSEWRSLKAKWDATSEGFVHPDRVSPWMI---VPIEPIKKYD 348
Query: 414 SP 415
SP
Sbjct: 349 SP 350
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 680 SCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVM 739
SCTKV K GS GR++D+ + +GY+ L+ EL+ +F+ +G L D + GW + Y D E D+M
Sbjct: 551 SCTKVLKHGS-AGRSVDITKFDGYDKLIRELDQMFDFKGTLIDGSSGWEVTY-DDEGDIM 608
Query: 740 V 740
+
Sbjct: 609 L 609
>gi|357123494|ref|XP_003563445.1| PREDICTED: auxin response factor 18-like [Brachypodium distachyon]
Length = 706
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 144/401 (35%), Positives = 200/401 (49%), Gaps = 42/401 (10%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSA-FPPIEVPNFDLQPQIFCKVVDVQ 118
+LWHACAG + +P + V YFPQGH E FPP + + C+V V
Sbjct: 25 QLWHACAGGMVQMPPVSSKVYYFPQGHAEHAQCGGGDFPPGAGAGRGIPALVLCRVAGVH 84
Query: 119 LLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTA 178
+A+ + DEV+ ++ L+P E +A G K P F KTLT
Sbjct: 85 FMADPDTDEVFAKIRLVPARPHEQPGGDAADDGGGINGAAAGHAEAEK--PASFAKTLTQ 142
Query: 179 SDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLT 238
SD + GGFSVPR AE FP LDY P Q ++AKD+HGV W+FRHIYRG PRRHLLT
Sbjct: 143 SDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLLT 202
Query: 239 TGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQP------------------RNGL 280
TGWS FV+QK LV+GD+++F+R ++G+L +GIRR+ + G
Sbjct: 203 TGWSSFVNQKKLVAGDSIVFMRTENGDLCVGIRRAKKGGIGGPELLPPPPPPPGTNYGGF 262
Query: 281 PDSILSKQNS-------------------YPNVLSVVANAVSTKSMFHVFYSPRATHADF 321
+ +++ P ++ AN ++ F V Y PRA+ +F
Sbjct: 263 SMFLRGEEDGSNKMMAAAAAARGKARVRVRPEEVAEAANLAASGQPFDVVYYPRASTPEF 322
Query: 322 VIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLM 380
+ + C G RFKM FE +DS G V+ + DP RWPNS WR L
Sbjct: 323 CVKAGAVRAAMRTQWCPGMRFKMAFETEDSSRISWFMGTVSAVQVSDPIRWPNSPWRLLQ 382
Query: 381 VRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS-SPRMKKL 420
V WDE + ++VSPW ++ ++P + + SP KKL
Sbjct: 383 VTWDEPDLLQNVKRVSPWLVELVSNMPAIHLAPFSPPRKKL 423
>gi|242039347|ref|XP_002467068.1| hypothetical protein SORBIDRAFT_01g019130 [Sorghum bicolor]
gi|241920922|gb|EER94066.1| hypothetical protein SORBIDRAFT_01g019130 [Sorghum bicolor]
Length = 689
Score = 239 bits (610), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 156/411 (37%), Positives = 213/411 (51%), Gaps = 41/411 (9%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAG + +P + V YFPQGH E + A L P + C V V+
Sbjct: 14 QLWHACAGGMVQMPPVRSRVYYFPQGHAEHAHAGGAADLAAGAR-PLPPLVLCAVTGVRF 72
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHM--FCKTLT 177
LA+ E DEV+ ++ L+P L +E ++ ++ G+ G G P + + F KTLT
Sbjct: 73 LADPETDEVFAKIRLVP---LAPGEVEFREPDEFGLGVGGVGVDPADAREKLSSFAKTLT 129
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
SD + GGFSVPR AE FP LDY+ P Q ++AKD+HG W+FRHIYRG PRRHLL
Sbjct: 130 QSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLL 189
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQ--------------PRNGLPDS 283
TTGWS FV+QK LV+GD+++FLR + GEL +GIRR+ + P G +
Sbjct: 190 TTGWSTFVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVSCGGMECMSGWNAPGYGALSA 249
Query: 284 ILSKQN--------------SYPNVLSVV--ANAVSTKSMFHVFYSPRATHADFVIPYQK 327
L + + VV A+ ++ F V Y PRA+ +FV+
Sbjct: 250 FLKDEEGKMIKGPGGYMRGRGKVKITDVVEAASLAASGQPFEVVYYPRASTPEFVVKAAS 309
Query: 328 YVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDEC 386
+ N C G RFKM FE +DS G + DP RWPNS WR L V WDE
Sbjct: 310 VQNAMRNQWCPGMRFKMAFETEDSSRISWFMGTIASAQVADPIRWPNSPWRLLQVTWDEP 369
Query: 387 IGSDHQEQVSPWEIDRSVSLPPLSIQS-SPRMKKLRTGLQAPPPDYPVSAR 436
+ + V+PW ++ S+PP+ + SP KKLR PD+P +
Sbjct: 370 DLLQNVKCVNPWLVEIVSSIPPIHLGPFSPPRKKLRMPQH---PDFPFDGQ 417
>gi|356570756|ref|XP_003553551.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 688
Score = 238 bits (608), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 151/403 (37%), Positives = 202/403 (50%), Gaps = 58/403 (14%)
Query: 61 LWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNF-DLQPQIFCKVVDVQL 119
LWHACAG + +P V YFPQGH E P++ + + P I CKV ++
Sbjct: 18 LWHACAGGMVQMPVVNAKVFYFPQGHAEHACG-----PVDFRVYPKIPPFIQCKVGAIKY 72
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
+A+ E DEVY ++ L+P EG ED V G + KS F KTLT S
Sbjct: 73 MADPETDEVYVKLRLVPLTRNEG------DFEDDAVGGINGSENKDKSPS--FAKTLTQS 124
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + GGFSVPR AE FP LDY P Q ++AKD+HG W+FRHIYRG PRRHLLTT
Sbjct: 125 DANNGGGFSVPRYCAETIFPRLDYSADPPVQNILAKDVHGETWKFRHIYRGTPRRHLLTT 184
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRS---------------------VQP-- 276
GWS FV+ K LV+GD+++FLR + +LR+GIRR+ ++P
Sbjct: 185 GWSSFVNHKKLVAGDSIVFLRAEKDDLRVGIRRAKRGIGIGGGPEAPAGWNSGGGIRPMP 244
Query: 277 ----------------RNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHAD 320
RNGL S +K P + A + F V Y PRA+ +
Sbjct: 245 YGGFSAFLREEDSQLLRNGL--SPNAKGKVRPEAVIEAATLAANMQPFEVVYYPRASAPE 302
Query: 321 FVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCL 379
F + + C G RFKM FE +DS G ++ + DP RWPNS WR L
Sbjct: 303 FCVKANLVRAALQVRWCPGMRFKMPFETEDSSRISWFMGTISSVNFADP-RWPNSPWRLL 361
Query: 380 MVRWDECIGSDHQEQVSPWEIDRSVSLPPLSI-QSSPRMKKLR 421
V WDE + ++VSPW ++ ++P + + S + KK R
Sbjct: 362 QVTWDEPELLQNVKRVSPWLVEIVSNMPTIHLSHYSTQQKKPR 404
>gi|356533969|ref|XP_003535530.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 608
Score = 238 bits (606), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 152/407 (37%), Positives = 210/407 (51%), Gaps = 49/407 (12%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAF----PPIEVPNFDLQPQIFCKVV 115
+LWHACAG + +P V YFPQGH E + VP P I C++
Sbjct: 11 QLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHGKVEYFGKNHQTRVP-----PLIPCRLS 65
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKT 175
++ +A+ + DEVY ++ L P E E L+ + LG GG + K P F KT
Sbjct: 66 AMKYMADPDTDEVYVKMRLTPLREHELLDSQDDCF--LGNTNSGGVENQEKP-PTSFAKT 122
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
LT SD + GGFSVPR AE FP LDY + P Q ++AKD+HG W+FRHIYRG PRRH
Sbjct: 123 LTQSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMHGQCWKFRHIYRGTPRRH 182
Query: 236 LLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPD------------- 282
LLTTGWS FV+QK LV+GD+++FLR ++G+L +GIRR+ + G +
Sbjct: 183 LLTTGWSNFVNQKRLVAGDSIVFLRAENGDLCVGIRRAKKGIGGGTEFSSGWNNPLFGGG 242
Query: 283 ---------SILSKQNSYPN-----------VLSVVANAVSTKSMFHVFYSPRATHADFV 322
S +S S + V+ V AV+ + F V Y PRA+ +F
Sbjct: 243 GGFLCGSESSFVSGAKSGGDHEIVGRVAPESVVEAVTCAVNGRP-FEVVYYPRASSPEFC 301
Query: 323 IPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMV 381
+ + C G RFKM FE +DS G ++ + DP RWP+S WR L V
Sbjct: 302 VKASVVKAAMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPIRWPDSPWRLLQV 361
Query: 382 RWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS-SPRMKKLRTGLQAP 427
WDE + + V+PW ++ ++P ++ + SP KK R LQ P
Sbjct: 362 VWDEPDLLQNVKCVNPWLVELVSNMPTFNLSAYSPPRKKQRF-LQDP 407
>gi|297610668|ref|NP_001064872.2| Os10g0479900 [Oryza sativa Japonica Group]
gi|255679498|dbj|BAF26786.2| Os10g0479900 [Oryza sativa Japonica Group]
Length = 379
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 143/364 (39%), Positives = 188/364 (51%), Gaps = 39/364 (10%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPI--EVPNFDLQPQIFCKVVDV 117
+LWHACAG + +P + V YF QGH E E+ L P + C+V V
Sbjct: 16 QLWHACAGGMVQMPAPRSRVYYFAQGHAEHADGGGGAAAAAAELGPRALPPLVLCRVEGV 75
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
Q LA++++DEVY ++ L P E E +L LG G P+ P F KTLT
Sbjct: 76 QFLADRDSDEVYAKIRLAPVAPGEAEFREPDELCPLGA--AGDAAEPSPEKPTSFAKTLT 133
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
SD + GGFSVPR AE FP LDY+ P Q ++AKD+HGV W+FRHIYRG PRRHLL
Sbjct: 134 QSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLL 193
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPD--------------- 282
TTGWS FV+QK LV+GD+++FLR + GEL +GIRR+ + G +
Sbjct: 194 TTGWSTFVNQKKLVAGDSIVFLRTRHGELCVGIRRAKRMACGGMECMSGWNAPGYGGGGF 253
Query: 283 -SILSKQNS----------------YPNVLSVV--ANAVSTKSMFHVFYSPRATHADFVI 323
+ L ++ S + VV A+ S+ F V Y PRA+ DFV+
Sbjct: 254 SAFLKEEESKLMKGHGGGGYMKGKGKVRMADVVEAASLASSGQPFEVAYYPRASTPDFVV 313
Query: 324 PYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMVR 382
+ C G RFKM FE +DS G ++ + DP RWPNS WR L V
Sbjct: 314 KAASVQAAMRIQWCSGMRFKMAFETEDSSRISWFMGTISSVQVADPNRWPNSPWRLLQVC 373
Query: 383 WDEC 386
+C
Sbjct: 374 LIQC 377
>gi|356574605|ref|XP_003555436.1| PREDICTED: auxin response factor 18-like [Glycine max]
Length = 589
Score = 236 bits (602), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 148/401 (36%), Positives = 209/401 (52%), Gaps = 40/401 (9%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSA-FPPIEVPNFDLQPQIFCKVVDVQ 118
+LWHACAG + +P V YFPQGH E FP + + P I C++ ++
Sbjct: 11 QLWHACAGAMVQMPPLNTKVFYFPQGHAEHAHGKRVDFPKNQT---RVPPLIPCRLSAMK 67
Query: 119 LLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHM-FCKTLT 177
+A+ + DEVY ++ L P E E L+ + LG GGG + P F KTLT
Sbjct: 68 YMADPDTDEVYVKMRLTPLREHELLDSQDDCF--LGNSAGGGGVDQGQEKPPTSFAKTLT 125
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
SD + GGFSVPR AE FP LDY + P Q ++AKD+ G W+FRHIYRG PRRHLL
Sbjct: 126 QSDANNGGGFSVPRYCAETIFPRLDYSAEPPVQTIIAKDMLGQCWKFRHIYRGTPRRHLL 185
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPD--------------- 282
TTGWS FV+QK LV+GD+++FLR ++G+L +GIRR+ + G +
Sbjct: 186 TTGWSNFVNQKRLVAGDSIVFLRAENGDLCVGIRRAKKGIGGGTEFSSGGWNNPLFGGGF 245
Query: 283 --------------SILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKY 328
+L + + +V+ V AV+ + F V Y PRA+ +F +
Sbjct: 246 LCGSESNLMSGGDHEMLVGRVAAESVVEAVTCAVNGRP-FEVVYYPRASSPEFCVKASVV 304
Query: 329 VKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECI 387
+ C G RFKM FE +DS G ++ + DP WP+S WR L V WDE
Sbjct: 305 KAAMQIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPILWPDSPWRLLQVVWDEPD 364
Query: 388 GSDHQEQVSPWEIDRSVSLPPLSIQS-SPRMKKLRTGLQAP 427
+ + V+PW ++ ++P ++ + SP KK R LQ P
Sbjct: 365 LLQNVKCVNPWLVELVSNMPTFNLSAYSPPRKKQRF-LQDP 404
>gi|297599632|ref|NP_001047488.2| Os02g0628600 [Oryza sativa Japonica Group]
gi|255671107|dbj|BAF09402.2| Os02g0628600 [Oryza sativa Japonica Group]
Length = 381
Score = 235 bits (599), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 138/372 (37%), Positives = 191/372 (51%), Gaps = 39/372 (10%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LW ACAG + ++P G V YFPQGH E +A E+ + + C+V V+
Sbjct: 21 QLWLACAGGMCTVPPVGAAVYYFPQGHAEHALGLAA---PELSAARVPALVPCRVASVRY 77
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
+A+ + DEV+ ++ L+P + ED V+E+G P F KTLT S
Sbjct: 78 MADPDTDEVFARIRLVP----------LRAAEDGDVEEDGAAAGEEHEKPASFAKTLTQS 127
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + GGFSVPR AE FP LDY P Q +VAKD+HGV W FRHIYRG PRRHLLTT
Sbjct: 128 DANNGGGFSVPRYCAETIFPRLDYAADPPVQTVVAKDVHGVAWNFRHIYRGTPRRHLLTT 187
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQ---------PRNGLPD----SILS 286
GWS FV+QK LV+GD+++FLRG G+L +GIRR+ + LP L
Sbjct: 188 GWSTFVNQKKLVAGDSIVFLRGDGGDLHVGIRRAKRGFCGGGGGAEEASLPGWDQYGGLM 247
Query: 287 KQNSYPNVLSVVANAVSTKSM------------FHVFYSPRATHADFVIPYQKYVKIIMN 334
+ N+ P + V + + F V Y PRA+ +F + +
Sbjct: 248 RGNASPCAAAKGRGKVRAEDLVEAARLANGGQPFEVVYYPRASTPEFCVRAAAVRAAMRV 307
Query: 335 PICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQE 393
C G RFKM FE +DS G V + DP RWP S WR L VR++ ++ +
Sbjct: 308 QWCPGMRFKMAFETEDSSRISWFMGTVASVQVADPIRWPQSPWRLLQVRYNIYTTANQSK 367
Query: 394 QVSPWEIDRSVS 405
+P+ + S++
Sbjct: 368 FFAPFSLPESMN 379
>gi|357164725|ref|XP_003580146.1| PREDICTED: auxin response factor 8-like [Brachypodium distachyon]
Length = 715
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 163/433 (37%), Positives = 221/433 (51%), Gaps = 61/433 (14%)
Query: 42 SCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEV 101
+C A SS++ S +LW ACAG + S+P G V YFPQGH EQ A + A V
Sbjct: 8 ACPAGSSAADDAVDS---QLWLACAGSMCSVPPVGAAVYYFPQGHAEQAAGAGAVDMPRV 64
Query: 102 PNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGG 161
P DL P C+V V+ +A+ ++DEV+ ++ LLP + + D+G E
Sbjct: 65 P--DLVP---CRVSAVRFMADPQSDEVFAKIRLLPL-------RRGEPVADVG--EAAAA 110
Query: 162 RSPTK-----STPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKD 216
R P + + P F KTLT SD + GGFSVPR AE FP LDY + P Q + +D
Sbjct: 111 REPLQQDADNNKPASFAKTLTQSDANNGGGFSVPRFCAETIFPALDYGAEPPVQSIFVRD 170
Query: 217 LHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGK-----DGELRLGIR 271
+HG E++FRHIYRG PRRHLLTTGWS FV+QK L++GD+V+FLR GE+ +GIR
Sbjct: 171 VHGEEFKFRHIYRGTPRRHLLTTGWSNFVNQKKLLAGDSVVFLRASGEGGGGGEVHVGIR 230
Query: 272 RSVQPRNGL----PDSILSKQNSYPNVL------------------SVVANAVSTKS--- 306
R+ + G P S S + Y ++ V A V+ +
Sbjct: 231 RARRVFCGADVEGPSSAASGWDHYRGLMRGNASSGNDGGGKGNNNNKVTAEDVAAAARLA 290
Query: 307 ----MFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVT 361
+F V Y PRA+ +F + + C G RFKM FE +DS G V
Sbjct: 291 AAGQVFEVVYYPRASTPEFCVRAGAVKAAMQVRWCPGMRFKMAFETEDSSRISWFMGTVA 350
Query: 362 GITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS-SPRMKKL 420
G+ DP WP S WR L V WDE + ++V PW ++ S+P L + S SP KK
Sbjct: 351 GVCAADPVHWPQSPWRLLQVSWDEPELLQNVKRVCPWLVELVSSMPNLHLPSFSPPRKKP 410
Query: 421 RTGLQAPPPDYPV 433
R A D+P+
Sbjct: 411 RIPTCA---DFPL 420
Score = 44.3 bits (103), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 683 KVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGL-LRDPAKGWRILYTDSENDVMVV 741
KV + +GR +DL +L+ + +L S + +F++E LR+ + Y + +V V
Sbjct: 639 KVFVESDAIGRNLDLSQLSSFEELYSRMSDMFDIESAELRN-----NVHYRSAAGEVKNV 693
Query: 742 GDDPWHEFCNEVSKIHIYTQEE 763
GD+P+ F ++ I+ + E
Sbjct: 694 GDEPFRAFVKSARRLTIFAEAE 715
>gi|413919918|gb|AFW59850.1| hypothetical protein ZEAMMB73_643249 [Zea mays]
gi|413919919|gb|AFW59851.1| hypothetical protein ZEAMMB73_643249 [Zea mays]
Length = 834
Score = 234 bits (597), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 154/400 (38%), Positives = 217/400 (54%), Gaps = 42/400 (10%)
Query: 38 SSSSSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP 97
SSSS+ S + ELWHACAGPL LP VVYFPQGH EQVA+S+
Sbjct: 2 SSSSAASIGQQPPEEEKKCLNSELWHACAGPLVCLPTVATRVVYFPQGHSEQVAASTNKE 61
Query: 98 -PIEVPNF-DLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGV 155
+PN+ +L PQ+ C++ DV + A+ E DEVY Q+ L P L ++ D +
Sbjct: 62 VDGHIPNYPNLPPQLICQLHDVTMHADVETDEVYAQMTLQP--------LNPQEQNDPYL 113
Query: 156 DEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDY------------ 203
E G S K + FCKTLTASDTSTHGGFSVPRRAAE FPPL +
Sbjct: 114 PAEMGIMS--KQPTNYFCKTLTASDTSTHGGFSVPRRAAERVFPPLLHAGLFGLLLQITG 171
Query: 204 ----KQQRPSQELVAKDLHGV-EWRFRHIYRG----QPRRHLLTTG-WSIFVSQKNL--- 250
+Q+ P ++L W R + R +P R + T W + +Q+
Sbjct: 172 GIVCRQRIPLSSRQRQELRNPGSWNGRALARKSRTEKPCRTIETGRCWIVGTAQRRTGWP 231
Query: 251 --VSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSMF 308
V G L + +L LGIRR+ +P+ +P S+LS + + +L+ A+A +T S F
Sbjct: 232 CGVPGGP--GLGNEKNQLLLGIRRASRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRF 289
Query: 309 HVFYSPRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRCNGVVTGITDLD 367
+F++PRA+ ++FVIP KY+K + + I +G RF+M FE ++S RR G +T ++D D
Sbjct: 290 TIFFNPRASPSEFVIPLSKYIKAVFHTRISVGMRFRMLFETEESSVRRYMGTITEVSDAD 349
Query: 368 PYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
P RWP+S WR + V WDE + +VS WEI+ + P
Sbjct: 350 PVRWPSSYWRSVKVGWDESTAGERPPRVSLWEIEPLTTFP 389
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Query: 676 PGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDS 734
P R+ KV+K GS VGR++D+ R + Y +L EL +F ++G L DP + GW++++ D
Sbjct: 732 PTTRTFVKVYKSGS-VGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDR 790
Query: 735 ENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
ENDV+++GDDPW F N V I I + E+V KM
Sbjct: 791 ENDVLLLGDDPWESFVNSVWYIKILSPEDVHKM 823
>gi|222629220|gb|EEE61352.1| hypothetical protein OsJ_15485 [Oryza sativa Japonica Group]
Length = 699
Score = 231 bits (590), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 141/392 (35%), Positives = 198/392 (50%), Gaps = 47/392 (11%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVV 115
S+ +LW ACAG ++S+P G V YFPQGH EQ +++ VP P + C+VV
Sbjct: 18 SVDSQLWAACAGSMSSVPPVGAAVYYFPQGHAEQASAAVDLSSARVP-----PLVPCRVV 72
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSP---TKSTPHMF 172
V+ +A+ E+DEV+ ++ L+P + D+G R ++ P F
Sbjct: 73 AVRFMADAESDEVFAKIRLVPL-------RPGDAVVDVGEAAAAEARREEENSRPRPTSF 125
Query: 173 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQP 232
KTLT SD + G R AE FP LDY + P Q + AKD+HGVEW FRHIYRG P
Sbjct: 126 AKTLTQSDANNGRGVLRARFCAETIFPELDYSSEPPVQSVCAKDVHGVEWTFRHIYRGTP 185
Query: 233 RRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRS------------------- 273
RRHLLTTGWS FV++K L +GD+++F+R + G + +G+RR+
Sbjct: 186 RRHLLTTGWSPFVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGDDESLSSIPG 245
Query: 274 ------VQPRNGLPDSILSK---QNSYP--NVLSVVANAVSTKSMFHVFYSPRATHADFV 322
+ RN + + + P NVL+ A +T F V Y PRA+ +F
Sbjct: 246 WDQYRGLMRRNATATATGGRTPPKGKVPPENVLTAATRA-TTGQPFEVLYYPRASTPEFC 304
Query: 323 IPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMV 381
+ + C G RFKM FE +DS G V G+ DP RWP S WR L V
Sbjct: 305 VRAAAVRTAMAVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQASDPVRWPQSPWRLLQV 364
Query: 382 RWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS 413
WDE + ++V PW ++ S+P L + S
Sbjct: 365 TWDEPELLQNVKRVCPWLVELVSSMPNLHLPS 396
>gi|413943302|gb|AFW75951.1| hypothetical protein ZEAMMB73_807339 [Zea mays]
Length = 690
Score = 229 bits (583), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 159/450 (35%), Positives = 212/450 (47%), Gaps = 75/450 (16%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLE--QVASSSAFPPIEVPNFDLQPQIFCKVVDV 117
+LWHACAG + +P + V YFPQGH E Q + + P VP + C+V V
Sbjct: 24 QLWHACAGGMVQMPPVHSRVYYFPQGHAEHAQGHAHADLPAGRVPAL-----VLCRVDAV 78
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ LA+ + DEV +V L P E + +A G R + P F KTLT
Sbjct: 79 RFLADPDTDEVLARVRLAPVRPNEPDHADAA---------APGAR---EDKPASFAKTLT 126
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
SD + GGFSVPR AE FP LDY P Q ++AKD+HGV W+FRHIYRG PRRHLL
Sbjct: 127 QSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLL 186
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQ---------PRNGLPDSILSKQ 288
TTGWS FV+QK LV+GD+++F+R +G+L +GIRR+ + P + PD
Sbjct: 187 TTGWSAFVNQKRLVAGDSIVFMRTGNGDLCVGIRRAKKGGIGGGPEFPHHQPPDGGGYGY 246
Query: 289 NSY------------------------PNVLSVVANAVSTKSMFHVFYSPRATHADFVIP 324
P + AN ++ F V Y PRA+ +F +
Sbjct: 247 GYAGFSTFLRGEEDDAAARGKVRVLVRPEEVVEAANLAASGQPFEVVYYPRASTPEFCVK 306
Query: 325 YQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMVRW 383
+ C G RFKM FE +DS G V + DP RWPNS WR L
Sbjct: 307 AGAVRAAMRTQWCAGMRFKMAFETEDSSRISWFMGTVAAVQVADPIRWPNSPWRLLQ--- 363
Query: 384 DECIGSDHQEQVSPWEIDRSVSLPP---LSIQSSPRMKKL-----RTGLQAPPPDY---P 432
+ ++VSPW ++ S P L+ S P KKL G Q P P + P
Sbjct: 364 -------NVKRVSPWLVELVSSTPAIHHLTPFSPPSRKKLCIPLYPEGHQLPAPMFHGSP 416
Query: 433 VSARGGGVLD-FEESVRSSKVLQGQENVGF 461
+ RG G + F + +QG + F
Sbjct: 417 LVGRGVGPMRYFPDGGTPPAGIQGARHAQF 446
>gi|115459460|ref|NP_001053330.1| Os04g0519700 [Oryza sativa Japonica Group]
gi|113564901|dbj|BAF15244.1| Os04g0519700 [Oryza sativa Japonica Group]
Length = 392
Score = 228 bits (582), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 136/360 (37%), Positives = 186/360 (51%), Gaps = 47/360 (13%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVV 115
S+ +LW ACAG ++S+P G V YFPQGH EQ +++ VP P + C+VV
Sbjct: 18 SVDSQLWAACAGSMSSVPPVGAAVYYFPQGHAEQASAAVDLSSARVP-----PLVPCRVV 72
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSP---TKSTPHMF 172
V+ +A+ E+DEV+ ++ L+P + D+G R ++ P F
Sbjct: 73 AVRFMADAESDEVFAKIRLVPL-------RPGDAVVDVGEAAAAEARREEENSRPRPTSF 125
Query: 173 CKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQP 232
KTLT SD + GGFSVPR AE FP LDY + P Q + AKD+HGVEW FRHIYRG P
Sbjct: 126 AKTLTQSDANNGGGFSVPRFCAETIFPELDYSSEPPVQSVCAKDVHGVEWTFRHIYRGTP 185
Query: 233 RRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRS------------------- 273
RRHLLTTGWS FV++K L +GD+++F+R + G + +G+RR+
Sbjct: 186 RRHLLTTGWSPFVNKKQLTAGDSIVFMRDEGGNIHVGLRRAKRGFCSIGGDDESLSSIPG 245
Query: 274 ------VQPRNGLPDSILSK---QNSYP--NVLSVVANAVSTKSMFHVFYSPRATHADFV 322
+ RN + + + P NVL+ A +T F V Y PRA+ +F
Sbjct: 246 WDQYRGLMRRNATATATGGRTPPKGKVPPENVLTAATRA-TTGQPFEVLYYPRASTPEFC 304
Query: 323 IPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMV 381
+ + C G RFKM FE +DS G V G+ DP RWP S WR L V
Sbjct: 305 VRAAAVRTAMAVQWCPGMRFKMAFETEDSSRISWFMGTVAGVQASDPVRWPQSPWRLLQV 364
>gi|379323244|gb|AFD01321.1| auxin response factor 26 [Brassica rapa subsp. pekinensis]
Length = 555
Score = 228 bits (581), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 125/346 (36%), Positives = 187/346 (54%), Gaps = 36/346 (10%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVD 116
+Y +LW CAGPL PK G +V L Q+ P F++ +I C V
Sbjct: 23 LYDQLWKLCAGPLFDPPKIGEELVTSINDELCQLK----------PVFNIPSKIRCNVFS 72
Query: 117 VQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTL 176
++L DE+Y +++LLP + + + + E+ F K L
Sbjct: 73 IKLKVETTTDEIYAEISLLP--DTSEVEIPTSKCEN------------NIQNIKCFTKVL 118
Query: 177 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHL 236
+ASDTS GGF + +R A +C PPLD PSQE+ A D+HG EW+F+H +G P+RHL
Sbjct: 119 SASDTSKKGGFVLNKRHAIECLPPLDMSHLTPSQEINATDIHGHEWKFKHALKGTPKRHL 178
Query: 237 LTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSV-QPRNGLPDSILSKQNSYPNVL 295
T+GW+ F K LV GD+ +FLRG++GE R+GI+++ + +P SI+SK++ + V+
Sbjct: 179 FTSGWNEFAKAKKLVVGDSFIFLRGENGESRVGIKKAAHHQQENIPSSIISKESMHHGVV 238
Query: 296 SVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERR 355
+ NA+ K MF VFY PR++ FV+ K+ + IG+RF M+FE D E
Sbjct: 239 ATALNAIKNKCMFVVFYKPRSSQ--FVVNIDKFRDGVNKKFSIGSRFLMKFEGKDFNE-- 294
Query: 356 CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
I++ W +S+WRCL V+WDE ++VSPWEI+
Sbjct: 295 -------ISERFLPHWKDSEWRCLEVQWDEAATIPRPDKVSPWEIE 333
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 63/96 (65%), Gaps = 5/96 (5%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDV 738
RS TKV +G++ R +DL +GYN L+ ELE LF+++G L + W+I++ +++ D+
Sbjct: 444 RSHTKVRMEGAM-ERTVDLSIFDGYNQLIDELERLFDIKGKLHIHNQ-WKIVFINADGDI 501
Query: 739 MVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGTTDD 774
M++GDDPW +FCN +I I ++ + + +G D+
Sbjct: 502 MLLGDDPWPKFCNTAEEIFICSKNDAK---VGDADN 534
>gi|379323226|gb|AFD01312.1| auxin response factor 16-2 [Brassica rapa subsp. pekinensis]
Length = 694
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 137/386 (35%), Positives = 202/386 (52%), Gaps = 58/386 (15%)
Query: 84 QGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGL 143
GH E +A+ ++ N + P + C+V+ ++ +A+ E+DEV+ ++ L+P + +
Sbjct: 83 HGHAE-----NAYDHVDFKNLPIPPMVLCRVLAIKYMADPESDEVFAKLRLIPLKDDD-- 135
Query: 144 NLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDY 203
D G +EG G F KTLT SD + GGFSVPR AE FP LDY
Sbjct: 136 -------HDYGDGQEGNGFETNSEKTPSFAKTLTQSDANNGGGFSVPRYCAETIFPRLDY 188
Query: 204 KQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKD 263
+ P Q ++AKD+HG W+FRHIYRG PRRHLLTTGWS FV+QK LV+GD+++F+R +
Sbjct: 189 NAEPPVQTILAKDVHGDVWKFRHIYRGTPRRHLLTTGWSNFVNQKKLVAGDSIVFMRAES 248
Query: 264 GELRLGIRRSVQPRNGLPD------------------SILSKQNS--------------- 290
G+L +GIRR+ R G+ + S+L + S
Sbjct: 249 GDLCVGIRRA--KRGGIGNGPEYSPGWNPIGGSCGYSSLLREDESNSLRRSNCSLADRKG 306
Query: 291 ---YPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFE 347
+V+ A++ + F V Y PRA+ ++F + + P C G RFKM FE
Sbjct: 307 KVAAESVIEAATLAINGRG-FEVVYYPRASTSEFCVKALDARAAMRIPWCSGMRFKMAFE 365
Query: 348 MDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSL 406
+DS G V+ ++ DP RWPNS WR L V WDE + ++V+PW ++ ++
Sbjct: 366 TEDSSRISWFMGTVSAVSVSDPIRWPNSPWRLLQVAWDEPDLLQNVKRVNPWLVELVSNV 425
Query: 407 PPLSIQS-SPRMKKLRTGLQAPPPDY 431
P+ + S SP KK+R PDY
Sbjct: 426 HPIPLTSFSPPRKKMRLPQH---PDY 448
Score = 40.4 bits (93), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 683 KVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVG 742
KV + VGR +DL L Y +L +L +F ++ + +LY D+ + G
Sbjct: 612 KVFMESDDVGRTLDLSVLGSYEELSRKLSDMFGIQKAEMLSS----VLYRDASGAIKYAG 667
Query: 743 DDPWHEFCNEVSKIHIYTQEEVEKMTI 769
++P+ EF ++ I T++ E + +
Sbjct: 668 NEPFSEFLKTARRLTIVTEQGSESVVV 694
>gi|226528158|ref|NP_001140452.1| hypothetical protein [Zea mays]
gi|194699576|gb|ACF83872.1| unknown [Zea mays]
gi|413934017|gb|AFW68568.1| hypothetical protein ZEAMMB73_208127 [Zea mays]
Length = 373
Score = 226 bits (576), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 137/362 (37%), Positives = 181/362 (50%), Gaps = 56/362 (15%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQ---------VASSSAFPPIEVPNFDLQPQI 110
+LWHACAG + +P + V YFPQGH E +A + A P L P +
Sbjct: 13 QLWHACAGGMVQMPPVRSRVYYFPQGHAEHAHGGGGATDLAGARARP--------LPPLV 64
Query: 111 FCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPH 170
C V V+ LA+ E DEV+ ++ L+P E +E + + G+D E +
Sbjct: 65 LCTVAGVRFLADPETDEVFAKIRLVPAAPGE---VEFGEPREFGIDPED-----AREKLS 116
Query: 171 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRG 230
F KTLT SD + GGFSVPR AE FP LDY+ P Q ++AKD+HG W+FRHI+RG
Sbjct: 117 SFAKTLTQSDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIFRG 176
Query: 231 QPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNS 290
PRRHLLTTGWS FV+QK LV+GD+++FLR + GEL +GIRR+ + G + I
Sbjct: 177 TPRRHLLTTGWSAFVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVSCGGMECISGWNAP 236
Query: 291 YPNVLSV------------------------VANAVSTKSM------FHVFYSPRATHAD 320
LS + + V S+ F V Y PRA+ +
Sbjct: 237 VYGALSAFLKDEEGKITKGPGGYMRGRGKVEITDVVEAASLAASGQPFEVVYYPRASTPE 296
Query: 321 FVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCL 379
FV+ + N C G RFKM FE +DS G + D RWPNS WR L
Sbjct: 297 FVVKAASVQNAMRNQWCPGMRFKMAFETEDSSRISWFMGTIASAQVADTIRWPNSPWRLL 356
Query: 380 MV 381
V
Sbjct: 357 QV 358
>gi|414871039|tpg|DAA49596.1| TPA: hypothetical protein ZEAMMB73_456369 [Zea mays]
Length = 370
Score = 224 bits (570), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 138/356 (38%), Positives = 181/356 (50%), Gaps = 41/356 (11%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAG + +P + V YFPQGH E A L + C V V+
Sbjct: 13 QLWHACAGGMVQMPPVRSRVYYFPQGHAEHAHGGGA--ADLAGARALPSLVLCSVTGVRF 70
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
LA+ E DEV+ ++ L+P E +E ++ ++ VD + + F KTLT S
Sbjct: 71 LADPETDEVFAKIRLVPVAPGE---VEFREPDEFSVDP-----ADAREKLSSFAKTLTQS 122
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + GGFSVPR AE FP LDY+ P Q ++AKD+HG W+FRHIYRG PRRHLLTT
Sbjct: 123 DANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIYRGTPRRHLLTT 182
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNG-------------------L 280
GWS FV+QK LV+GD+++FLR + GEL +GIRR + G L
Sbjct: 183 GWSTFVNQKKLVAGDSIVFLRTEHGELCVGIRRVKRVSCGGMECMSGWNAPGYGALSAFL 242
Query: 281 PD---SILSKQNSYPN-----VLSVVANAVSTKSM---FHVFYSPRATHADFVIPYQKYV 329
D ++ Y ++ V NA S + F V Y PRA+ +FV+
Sbjct: 243 KDEEGKMMKSHGGYMRGRGKVKITDVVNAASLAASGQPFEVVYYPRASTPEFVVKAASVQ 302
Query: 330 KIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMVRWD 384
+ N C G RFKM FE +DS G + DP RWPNS WR L V D
Sbjct: 303 NAMRNQWCPGMRFKMAFETEDSSRISWFMGTIASAQVADPIRWPNSPWRLLQVLLD 358
>gi|87240937|gb|ABD32795.1| Transcriptional factor B3; Auxin response factor [Medicago
truncatula]
Length = 648
Score = 223 bits (567), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 153/436 (35%), Positives = 216/436 (49%), Gaps = 70/436 (16%)
Query: 52 SLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPI-EVPNFDLQPQI 110
+++ S+ +LWHA AG + +P+ + V YFPQGH E F ++P+F I
Sbjct: 23 NVNKSVDPQLWHAVAGGMVQMPEVNSQVFYFPQGHAEHACEPVNFSSYSKIPSF-----I 77
Query: 111 FCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPH 170
C+V ++ +AN E DEVY ++ L+P +N+ ++ GV G S TK
Sbjct: 78 PCRVEAIRYMANHETDEVYAKLRLVP------MNINQVSFDNDGV--AGINVSETKDKHQ 129
Query: 171 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRG 230
F KTLT SD + GGFS PR AE FP LDY P Q++ KD+HG +W FRH+YRG
Sbjct: 130 SFAKTLTQSDANNGGGFSCPRYCAETLFPRLDYSANPPLQDIFPKDVHGEKWHFRHVYRG 189
Query: 231 QPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQ--------------- 275
P+RHLLTTGWS FVS K L SGD+++FLR ++G+L +GIRR+ +
Sbjct: 190 TPKRHLLTTGWSPFVSDKKLASGDSIVFLRSENGDLHVGIRRAKRRNNVGVDPLSGWKSG 249
Query: 276 ---------PRNGLP------DSILSKQNSYPNVLSV--------------VANAV---S 303
P G P D+ L ++N N L + V AV +
Sbjct: 250 SGIGICAAPPYGGFPSFSGEEDNKL-RRNGKGNGLLISDGMMGRGKVKALEVIEAVRLGT 308
Query: 304 TKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCN-GVVTG 362
F V Y PR+ +F + + C G RFKM E +DS G V
Sbjct: 309 NMQPFDVVYYPRSGTPEFFVKTSLIGMALQIRWCPGMRFKMAIETEDSSRISWFIGTVAS 368
Query: 363 ITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP--PLSIQSSPRMKKL 420
+ DP W +S WR L V WDE + ++V+PW+++ ++P PLS PR KKL
Sbjct: 369 VQAADP-SWSDSMWRLLEVTWDEPELLKNVKRVNPWQVEIVSNMPSIPLSPFIPPR-KKL 426
Query: 421 RTGLQAPPPDYPVSAR 436
R PD+P+ +
Sbjct: 427 RL---PQLPDFPIDGQ 439
>gi|350540040|ref|NP_001234880.1| auxin response factor 16 [Solanum lycopersicum]
gi|300253178|gb|ADJ96591.1| auxin response factor 16 [Solanum lycopersicum]
Length = 671
Score = 223 bits (567), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 134/395 (33%), Positives = 197/395 (49%), Gaps = 56/395 (14%)
Query: 61 LWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQLL 120
WH C G + +P + V YFPQG+ E ++ F + + I C+V V+ L
Sbjct: 13 FWHVCTGSMVQIPPVNSKVFYFPQGYAEHTFTNVDFTVLA----RIPAMILCRVDAVKFL 68
Query: 121 ANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASD 180
A+ E DEVY ++ L+P + ED V EE P F KTLT SD
Sbjct: 69 ADTETDEVYAKIRLIP----------VEDFEDDSVVEE-------TEKPAFFAKTLTQSD 111
Query: 181 TSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTG 240
+ GGFSVPR AE FP LD+ P Q + AKD+HGV W FRHIYRG PRRHLLT+G
Sbjct: 112 ANNGGGFSVPRYCAETIFPKLDFTADPPVQVVKAKDVHGVTWNFRHIYRGTPRRHLLTSG 171
Query: 241 WSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDS--------------ILS 286
WS FV++K LV+G +V+F++ ++ EL +GIRR + G P++ +
Sbjct: 172 WSAFVNKKKLVAGGSVVFVKAENDELCVGIRRVKRGGIGGPETQSGWKSTACSYGGFVTE 231
Query: 287 KQNS-------------------YPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQK 327
+NS P+ + V+ + F + Y P A+ ++ +
Sbjct: 232 DENSSTNGNLISYGERFRDKGKVSPDEVVRVSCLAANGQPFEIVYYPGASTPEYCVKASS 291
Query: 328 YVKIIMNPICIGTRFKMRFEMDD-SPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDEC 386
+ C G RFKM FE +D S G ++ + +DP RWP+S WR L V WDE
Sbjct: 292 VRAAMSVQWCSGMRFKMAFETEDFSQISWFMGSISSVQVVDPIRWPHSLWRLLQVTWDEP 351
Query: 387 IGSDHQEQVSPWEIDRSVSLPPLSI-QSSPRMKKL 420
+ + V+PW ++ ++P +++ +SP K+L
Sbjct: 352 DLLQNVKSVNPWLVELVSNMPDINLSHNSPPRKRL 386
>gi|357510693|ref|XP_003625635.1| Auxin response factor [Medicago truncatula]
gi|355500650|gb|AES81853.1| Auxin response factor [Medicago truncatula]
Length = 1252
Score = 222 bits (566), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 153/436 (35%), Positives = 216/436 (49%), Gaps = 70/436 (16%)
Query: 52 SLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPI-EVPNFDLQPQI 110
+++ S+ +LWHA AG + +P+ + V YFPQGH E F ++P+F I
Sbjct: 23 NVNKSVDPQLWHAVAGGMVQMPEVNSQVFYFPQGHAEHACEPVNFSSYSKIPSF-----I 77
Query: 111 FCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPH 170
C+V ++ +AN E DEVY ++ L+P +N+ ++ GV G S TK
Sbjct: 78 PCRVEAIRYMANHETDEVYAKLRLVP------MNINQVSFDNDGV--AGINVSETKDKHQ 129
Query: 171 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRG 230
F KTLT SD + GGFS PR AE FP LDY P Q++ KD+HG +W FRH+YRG
Sbjct: 130 SFAKTLTQSDANNGGGFSCPRYCAETLFPRLDYSANPPLQDIFPKDVHGEKWHFRHVYRG 189
Query: 231 QPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQ--------------- 275
P+RHLLTTGWS FVS K L SGD+++FLR ++G+L +GIRR+ +
Sbjct: 190 TPKRHLLTTGWSPFVSDKKLASGDSIVFLRSENGDLHVGIRRAKRRNNVGVDPLSGWKSG 249
Query: 276 ---------PRNGLP------DSILSKQNSYPNVLSV--------------VANAV---S 303
P G P D+ L ++N N L + V AV +
Sbjct: 250 SGIGICAAPPYGGFPSFSGEEDNKL-RRNGKGNGLLISDGMMGRGKVKALEVIEAVRLGT 308
Query: 304 TKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTG 362
F V Y PR+ +F + + C G RFKM E +DS G V
Sbjct: 309 NMQPFDVVYYPRSGTPEFFVKTSLIGMALQIRWCPGMRFKMAIETEDSSRISWFIGTVAS 368
Query: 363 ITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP--PLSIQSSPRMKKL 420
+ DP W +S WR L V WDE + ++V+PW+++ ++P PLS PR KKL
Sbjct: 369 VQAADP-SWSDSMWRLLEVTWDEPELLKNVKRVNPWQVEIVSNMPSIPLSPFIPPR-KKL 426
Query: 421 RTGLQAPPPDYPVSAR 436
R PD+P+ +
Sbjct: 427 RL---PQLPDFPIDGQ 439
Score = 206 bits (524), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 133/354 (37%), Positives = 176/354 (49%), Gaps = 46/354 (12%)
Query: 58 YFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPI-EVPNFDLQPQIFCKVVD 116
+ LWHA AG + +P+ + V YFPQGH E F ++P+F I C+V D
Sbjct: 807 HLPLWHAIAGGMVQMPEVNSQVFYFPQGHAEHACEPVNFSAYSKIPSF-----IPCRVED 861
Query: 117 VQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTL 176
++ +AN E DEVY ++ L+P +N+ ++ GV G S TK F KTL
Sbjct: 862 IRYMANHETDEVYAKLRLVP------MNINQVSFDNDGV--AGINVSETKDKHQSFAKTL 913
Query: 177 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHL 236
T SD + GGFS PR AE FP +DY P Q + KD+HG +W FRH+YRG P+RHL
Sbjct: 914 TQSDANNGGGFSCPRYCAEMIFPRMDYSGNPPFQGIYPKDVHGEKWHFRHVYRGTPKRHL 973
Query: 237 LTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRR-----SVQP--------------- 276
LTTGWS FVS K L SGD+V+FLR ++GELR+GI R + P
Sbjct: 974 LTTGWSPFVSDKKLASGDSVVFLRSENGELRVGIWREKSGIGICPAPPYGGFTSFSEEED 1033
Query: 277 ----RNGLPDSILSKQN----SYPNVLSVVANAVSTKSM--FHVFYSPRATHADFVIPYQ 326
RNG + +L VL V+ +M F V Y PR+ +F +
Sbjct: 1034 NKLRRNGKGNGLLISDGMMGRGKVKVLEVIEAVRLGTNMQPFDVVYYPRSGTPEFFVKTS 1093
Query: 327 KYVKIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCL 379
+ C G RFKM E +DS G V + DP WP+S WR L
Sbjct: 1094 LIGITLQIRWCPGMRFKMPIETEDSSRISWFIGTVASVQAADP-SWPDSLWRLL 1146
>gi|413918947|gb|AFW58879.1| hypothetical protein ZEAMMB73_937745 [Zea mays]
Length = 588
Score = 221 bits (564), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 143/409 (34%), Positives = 205/409 (50%), Gaps = 52/409 (12%)
Query: 29 GCVCYLNSSSSSSSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLE 88
C L +S A + + S++ +LW+ACAGP ++P G V YFPQGH E
Sbjct: 5 ACELTLAPRMPASQAGAGAGAEPETKGSVHPQLWYACAGPTCTVPPVGTAVYYFPQGHAE 64
Query: 89 QVASSSAFPPIEVPNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAK 148
+++ N P + C+V V+ +A + DE++ ++ L P +
Sbjct: 65 HAGAAADA------NLHAPPFVPCRVAGVRFMAELDTDEIFVKIRLDPL-------RSGE 111
Query: 149 QLEDLG----VDEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYK 204
L D+G V++E G R PT+ KTLT SD+ + G SV R AE FP LD
Sbjct: 112 PLTDVGEAQVVNDEAGQRQPTRPVISS-AKTLTKSDSYSGGSLSVRRTCAETIFPKLDKS 170
Query: 205 QQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDG 264
+RP Q + A+D+HGVEW FRH+YRG P R+LLTTGWS FV+ K +V GD+V+FLR +DG
Sbjct: 171 IKRPQQLVSARDVHGVEWTFRHVYRGTPERNLLTTGWSDFVNSKKIVIGDSVVFLREEDG 230
Query: 265 ELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSM----------------- 307
+ +G+RR+ + S++N+Y L V NA T +
Sbjct: 231 TIHIGLRRAER---------ASRRNAYGRQL-VRGNASGTGAAADGVLRAEDVVAAAVTL 280
Query: 308 ------FHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDD-SPERRCNGVV 360
F V + PRAT F + ++ + C G RFKM FE D S G V
Sbjct: 281 AAAGNPFEVVHYPRATAPAFCVRVATVIEALQVSWCPGLRFKMAFEAKDLSRISWFMGTV 340
Query: 361 TGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPL 409
G+ DP RWP S WR L V WDE + ++SPW+++ ++P L
Sbjct: 341 AGVGPADPARWPLSPWRFLQVTWDEPELVRNMNRLSPWQVELVATMPNL 389
>gi|255545568|ref|XP_002513844.1| Auxin response factor, putative [Ricinus communis]
gi|223546930|gb|EEF48427.1| Auxin response factor, putative [Ricinus communis]
Length = 603
Score = 220 bits (560), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 144/395 (36%), Positives = 197/395 (49%), Gaps = 39/395 (9%)
Query: 61 LWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDL--QPQIFCKVVDVQ 118
+W ACAG +P + V YFPQGHLEQ ++SS+ + + +P I C++ VQ
Sbjct: 18 IWRACAGSSVQIPTINSRVYYFPQGHLEQSSNSSSIVSSCILSSIALSKPVIPCQISAVQ 77
Query: 119 LLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHM--FCKTL 176
LA+ DEVYT++ L P ++ N LE G E+ G + F K L
Sbjct: 78 FLADPVTDEVYTKLLLFP---IDSFNPSVPVLEHSGNLEQHHGYDYDDDEDKIVAFAKIL 134
Query: 177 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHL 236
T SD + GGFSVPR A+ FPPL+Y + P Q L D+HG+ W FRHIYRG PRRHL
Sbjct: 135 TPSDANNGGGFSVPRFCADSIFPPLNYHAEPPVQTLTVTDIHGITWDFRHIYRGTPRRHL 194
Query: 237 LTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPD-------------- 282
LTTGWS FV+ K L++GD+V+F+R G++ +G+RR+V+P NG D
Sbjct: 195 LTTGWSKFVNHKKLIAGDSVVFMRNMTGKMFIGVRRAVRPNNGGSDCARWREQIACFGGG 254
Query: 283 ----SILSKQNSYPN----------VLSVVANAVSTKSMFHVFYSPRAT-HADFVIPYQK 327
+ K+ Y V+ V A S F V Y PRA ++DFV+
Sbjct: 255 GGDVKMKVKEEGYSRNGRGKVSPEAVMEAVERAAQGFS-FEVVYYPRAGWYSDFVVRTDV 313
Query: 328 YVKIIMNPICIGTRFKMRFEMDDSPERRC-NGVVTGITDLDPYRWPNSKWRCLMVRWDEC 386
+ G R KM E +DS G + + D W S WR L V WDE
Sbjct: 314 VDGALAVCWSAGMRVKMAMETEDSSRMTWFQGTIASASLPDCGLWRGSPWRMLQVAWDEP 373
Query: 387 IGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLR 421
+ ++VSPW+++ PPL + P KK R
Sbjct: 374 EVLQNAKRVSPWQVEYVSPSPPLH-GAFPPAKKFR 407
>gi|308081526|ref|NP_001183887.1| uncharacterized protein LOC100502480 [Zea mays]
gi|238015272|gb|ACR38671.1| unknown [Zea mays]
Length = 534
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 102/196 (52%), Positives = 139/196 (70%), Gaps = 1/196 (0%)
Query: 213 VAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRR 272
+AKDLHG EW+FRHI+RGQP+RHLLTTGWS+FVS K LV+GD+VLF+ + +L LGIRR
Sbjct: 1 MAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRR 60
Query: 273 SVQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKII 332
+ +P+ +P S+LS + + +L+ A+A ST S F +FY+PRA+ ++FVIP KYVK +
Sbjct: 61 ANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIPLVKYVKAV 120
Query: 333 MNP-ICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDH 391
+ I +G RF+M FE ++S RR G +TGI DLD RWPNS WR + V WDE +
Sbjct: 121 YHTRISVGMRFRMLFETEESSVRRYMGTITGICDLDSVRWPNSHWRSVKVGWDESTAGER 180
Query: 392 QEQVSPWEIDRSVSLP 407
Q +VS WEI+ + P
Sbjct: 181 QPRVSLWEIEPLTTFP 196
>gi|218190030|gb|EEC72457.1| hypothetical protein OsI_05804 [Oryza sativa Indica Group]
Length = 1067
Score = 216 bits (550), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 116/230 (50%), Positives = 149/230 (64%), Gaps = 24/230 (10%)
Query: 54 SSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPP-------IEVPNF-D 105
+++I ELWHACAGPL SLP G++VVYFPQGH EQV S+ VP++ +
Sbjct: 38 AAAINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVYKSNIVAASMQKDVDAHVPSYPN 97
Query: 106 LQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPT 165
L ++ C + V L A+ + DEVY Q+ L P + EA QL +L + +
Sbjct: 98 LPSKLICLLHGVNLHADPDTDEVYAQMTLQP---VNTYGKEALQLSELALKQ-------- 146
Query: 166 KSTPHM--FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWR 223
+ P M FCKTLTASDTSTHGGFSVPRRAAE FPPLD+ Q P+QEL A+D+H W
Sbjct: 147 -ARPQMEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQELQARDIHDNVWT 205
Query: 224 FRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRG--KDGELRLGIR 271
FRHIYRGQP+RHLLTTGWS+FVS K L +GD+V+ +R ++ LG+R
Sbjct: 206 FRHIYRGQPKRHLLTTGWSLFVSGKRLFAGDSVIVVRRHCDSNQISLGMR 255
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 66/92 (71%), Gaps = 2/92 (2%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSEND 737
R+ TKV+K+G+ VGR+ID+ R +GY +L L +F +EG L D + GW+++Y D E+D
Sbjct: 934 RTFTKVYKRGA-VGRSIDIGRYSGYEELKHALARMFGIEGQLEDRQRIGWKLVYKDHEDD 992
Query: 738 VMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
++++GDDPW EF N V I I + +EV++M++
Sbjct: 993 ILLLGDDPWEEFVNCVRCIRILSPQEVQQMSL 1024
>gi|413934438|gb|AFW68989.1| hypothetical protein ZEAMMB73_088581 [Zea mays]
Length = 739
Score = 216 bits (549), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 102/196 (52%), Positives = 139/196 (70%), Gaps = 1/196 (0%)
Query: 213 VAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRR 272
+AKDLHG EW+FRHI+RGQP+RHLLTTGWS+FVS K LV+GD+VLF+ + +L LGIRR
Sbjct: 1 MAKDLHGNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDNNQLLLGIRR 60
Query: 273 SVQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKII 332
+ +P+ +P S+LS + + +L+ A+A ST S F +FY+PRA+ ++FVIP KYVK +
Sbjct: 61 ANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRASPSEFVIPLVKYVKAV 120
Query: 333 MNP-ICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDH 391
+ I +G RF+M FE ++S RR G +TGI DLD RWPNS WR + V WDE +
Sbjct: 121 YHTRISVGMRFRMLFETEESSVRRYMGTITGICDLDSVRWPNSHWRSVKVGWDESTAGER 180
Query: 392 QEQVSPWEIDRSVSLP 407
Q +VS WEI+ + P
Sbjct: 181 QPRVSLWEIEPLTTFP 196
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 61/87 (70%), Gaps = 2/87 (2%)
Query: 682 TKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMV 740
KV+K G+ GR++D+ R + Y++L EL LF +EG L DP + GW++++ D E DV++
Sbjct: 609 VKVYKSGT-YGRSLDITRFSSYHELRRELGRLFGLEGQLEDPLRSGWQLVFVDREEDVLL 667
Query: 741 VGDDPWHEFCNEVSKIHIYTQEEVEKM 767
VGDDPW EF + VS I I + +EV++M
Sbjct: 668 VGDDPWQEFVSTVSCIKILSPQEVQQM 694
>gi|326502568|dbj|BAJ95347.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 388
Score = 215 bits (548), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 129/349 (36%), Positives = 177/349 (50%), Gaps = 37/349 (10%)
Query: 56 SIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVV 115
S+ +LW ACAG + ++P G V YFPQGH EQ ++ VP + C+V
Sbjct: 19 SVDAQLWLACAGSMCTVPPVGAAVYYFPQGHAEQATAAVDLSAACVPAL-----LPCRVS 73
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKT 175
V+ +A+ +DEV+ ++ L+P D+G G + P F KT
Sbjct: 74 AVRFMADAHSDEVFAKIRLVPL-------RHGDPAVDVGDAAAQGRPQDDRPKPASFAKT 126
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
LT SD + GGFSVPR AE FP LDY + P Q +V +D+HG E++FRHIYRG PRRH
Sbjct: 127 LTQSDANNGGGFSVPRFCAETIFPALDYSSEPPVQSIVVRDVHGDEFKFRHIYRGTPRRH 186
Query: 236 LLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVL 295
LLTTGWS FV+QK L++GD+++FLR GE+ +G+RR+ + D S + Y ++
Sbjct: 187 LLTTGWSNFVNQKKLLAGDSIVFLRSDGGEVHVGVRRA---KRVFCDEGHSGWDHYRGLM 243
Query: 296 ---------SVVANAVSTKSM------------FHVFYSPRATHADFVIPYQKYVKIIMN 334
+ V + + F V Y PRA+ +F + +
Sbjct: 244 RGGNAGSGDAAAKGKVPAEDVVAAARLAAAGQPFEVVYYPRASTPEFCVRAGAVRAAMQV 303
Query: 335 PICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMVR 382
G RFKM FE +DS G V GI DP RWP S WR L VR
Sbjct: 304 QWRPGMRFKMAFETEDSSRISWFMGTVAGIHAADPSRWPQSPWRLLQVR 352
>gi|350537067|ref|NP_001234790.1| auxin response factor 14 [Solanum lycopersicum]
gi|310697418|gb|ADP06664.1| auxin response factor 14 [Solanum lycopersicum]
Length = 375
Score = 215 bits (547), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 127/357 (35%), Positives = 182/357 (50%), Gaps = 49/357 (13%)
Query: 61 LWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAF-PPIEVPNFDLQPQIFCKVVDVQL 119
LW ACAG + +P ++V+YFPQGH E + F +++P++ I C+V ++
Sbjct: 20 LWQACAGTMVKMPAVDSIVLYFPQGHAEHAGVNVEFRSDVKIPSY-----IPCRVSSIKY 74
Query: 120 LANKENDEVYTQVALLPQPELEGLNL-EAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTA 178
+A +E DEV+ ++ L P E E + + +G D P F KTLT
Sbjct: 75 MAERETDEVFAKIRLTPVRLSEFFETPEEEGMVKIGSDNS--------RKPLSFAKTLTQ 126
Query: 179 SDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLT 238
SD + GGFSVP+ A+ FP LDY P Q L A D+HG W+FRHIYRG P RHLLT
Sbjct: 127 SDANNGGGFSVPKNCADTIFPTLDYNVNPPVQTLSATDIHGKSWQFRHIYRGTPERHLLT 186
Query: 239 TGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQ----------------------P 276
TGWS FV+QK LV+GD+++FLR ++ ++ +GIRR + P
Sbjct: 187 TGWSTFVNQKKLVAGDSIVFLRNENDKISIGIRRIKKKSVAMEPETSPWWFPSVGNLTIP 246
Query: 277 RNGLPDSILSKQN-----SYPNVLSVVANAV--STKSM-----FHVFYSPRATHADFVIP 324
R G + N S N +V A +V +TK F V + P++T +F +
Sbjct: 247 RGGFSAFLRDDHNTNSSWSLINRGNVKAESVIEATKLATNGQPFEVIFYPQSTTPEFFVK 306
Query: 325 YQKYVKIIMNPICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMV 381
+ + P C G RFKM FE +D G ++ + DP +WP+S WR L V
Sbjct: 307 ASRVKAALQIPWCSGMRFKMPFETEDLVISWFMGTISSVQANDPSQWPDSPWRMLQV 363
>gi|414875582|tpg|DAA52713.1| TPA: hypothetical protein ZEAMMB73_730460 [Zea mays]
Length = 624
Score = 214 bits (545), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 131/368 (35%), Positives = 182/368 (49%), Gaps = 76/368 (20%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSS--AFPPIEVPNFDLQPQIFCKV 114
++ ELW ACAGPL LP+ V YF QGHLEQ+ + A ++ F + +I CK
Sbjct: 12 LFEELWRACAGPLVELPQTNERVFYFLQGHLEQLQEPTDPALLAEQIKMFQVPNKILCK- 70
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
A E DE+Y Q+ L P+P+ ++ QL + + E ++ H FCK
Sbjct: 71 ------AETETDEMYAQITLQPEPD----QVDLPQLPEPPLQE------TSRPVVHSFCK 114
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
LT SDTSTHGGFSV RR A +C P LD P+QEL+ KDLHG EWRF+HIYRGQPRR
Sbjct: 115 ILTPSDTSTHGGFSVLRRHANECLPALDMSMPTPTQELITKDLHGSEWRFKHIYRGQPRR 174
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
HLLTTGWS FV+ K L++GDA ++LR + + + + ++
Sbjct: 175 HLLTTGWSTFVTSKKLIAGDAFVYLRLSQSQYIVRLNKYLE------------------- 215
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
S+K F V + + +P +K+
Sbjct: 216 --------SSKIGFDVGMRFKMSFEGDDVPIKKF-------------------------- 241
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID-RSVSLPPLSIQS 413
+G V DL P +W S+W+ L V+WDE + E+VS WEI+ S P +++
Sbjct: 242 --SGTVVDKGDLSP-QWQGSEWKTLKVKWDEATNLNGPERVSSWEIEPFDASAPAITMPV 298
Query: 414 SPRMKKLR 421
P MK R
Sbjct: 299 QPSMKNKR 306
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%)
Query: 672 SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILY 731
S QS RS KV G+ V RA+DL L+GY L+ E+ +F ++ L + W++ +
Sbjct: 515 SHQSCSGRSRIKVQMHGNDVCRAVDLGNLDGYEQLMGEVGEMFEIKDLGSKEKEEWKVTF 574
Query: 732 TDSENDVMVVGDDPWHEFCNEVSKIHIYT 760
+ EN+ M VG PW EFC V KI I++
Sbjct: 575 INDENETMEVGAVPWQEFCQMVRKIVIHS 603
>gi|359492813|ref|XP_002284328.2| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 17-like
[Vitis vinifera]
Length = 593
Score = 213 bits (541), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 132/366 (36%), Positives = 189/366 (51%), Gaps = 33/366 (9%)
Query: 61 LWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQLL 120
+W ACAG +P + V YFPQGH+EQ +S PP+ P +P + C+VV V L
Sbjct: 16 IWRACAGKSVHIPAVHSRVYYFPQGHVEQASS----PPVLSPLVFSKPSVLCRVVAVWFL 71
Query: 121 ANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHM-FCKTLTAS 179
A+++ DEV+ ++ L P G + E+ +E V + + M F K LT+S
Sbjct: 72 ADQDTDEVFAKIRLEPV----GRSWESGTMERRRVGDGDDDKEDEGEDKVMSFVKILTSS 127
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + GGFSVPR A+ FPPL+++ P Q L+ DL G +W FRHIYRG PRRHLLTT
Sbjct: 128 DANNGGGFSVPRFCADYIFPPLNFQADPPVQHLLFTDLRGTKWDFRHIYRGTPRRHLLTT 187
Query: 240 GWSIFVSQKNLVSGDAVLFL-RGKDGELRLGIRRSVQ-PRNG--------LPDSILSKQN 289
GWS FV+ K LV+GD+V+F+ R + EL +G+RR + RNG L ++ +K+
Sbjct: 188 GWSKFVNDKKLVAGDSVVFMKRNSNSELFIGVRRDARWNRNGERWSFRSALAGAVKAKEV 247
Query: 290 SYPNVLSVVANAVSTKSM-------------FHVFYSPRATHADFVIPYQKYVKIIMNPI 336
S ++ F V Y PR +DFV+ + + +
Sbjct: 248 GSIEGFSRSSSGRVRAEEVAVAAELAAQGMPFEVVYYPRVGSSDFVVKAEVVEEALSVFW 307
Query: 337 CIGTRFKMRFEMDDSPERRC-NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQV 395
G R KM E +DS + G V+ T +D W S WR L V WDE + +V
Sbjct: 308 TGGMRVKMAMETEDSSKTSLFQGTVSSATVMDNGPWRGSLWRMLQVTWDEPEVLQNVMRV 367
Query: 396 SPWEID 401
SPW+++
Sbjct: 368 SPWQVE 373
>gi|224028337|gb|ACN33244.1| unknown [Zea mays]
Length = 360
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 123/323 (38%), Positives = 165/323 (51%), Gaps = 39/323 (12%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFD-LQPQIFCKVVDVQ 118
+LWHACAG + +P + V YFPQGH E + L P + C V V+
Sbjct: 13 QLWHACAGGMVQMPPVRSRVYYFPQGHAEHAHGGGGATDLAGARARPLPPLVLCTVAGVR 72
Query: 119 LLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTA 178
LA+ E DEV+ ++ L+P E +E + + G+D E + F KTLT
Sbjct: 73 FLADPETDEVFAKIRLVPAAPGE---VEFGEPREFGIDPE-----DAREKLSSFAKTLTQ 124
Query: 179 SDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLT 238
SD + GGFSVPR AE FP LDY+ P Q ++AKD+HG W+FRHI+RG PRRHLLT
Sbjct: 125 SDANNGGGFSVPRYCAETIFPKLDYRADPPVQTVLAKDVHGEVWKFRHIFRGTPRRHLLT 184
Query: 239 TGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV- 297
TGWS FV+QK LV+GD+++FLR + GEL +GIRR+ + G + I LS
Sbjct: 185 TGWSAFVNQKKLVAGDSIVFLRTEHGELCVGIRRAKRVSCGGMECISGWNAPVYGALSAF 244
Query: 298 -----------------------VANAVSTKSM------FHVFYSPRATHADFVIPYQKY 328
+ + V S+ F V Y PRA+ +FV+
Sbjct: 245 LKDEEGKITKGPGGYMRGRGKVEITDVVEAASLAASGQPFEVVYYPRASTPEFVVKAASV 304
Query: 329 VKIIMNPICIGTRFKMRFEMDDS 351
+ N C G RFKM FE +DS
Sbjct: 305 QNAMRNQWCPGMRFKMAFETEDS 327
>gi|226498234|ref|NP_001142397.1| uncharacterized protein LOC100274571 [Zea mays]
gi|194708626|gb|ACF88397.1| unknown [Zea mays]
Length = 543
Score = 212 bits (539), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 167/534 (31%), Positives = 250/534 (46%), Gaps = 91/534 (17%)
Query: 307 MFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCNGVVTGITDL 366
MF V+Y PR + ++F+IPY +Y++ + N IG RF+MRFE +++PE+R G + G +L
Sbjct: 1 MFTVYYKPRTSPSEFIIPYDQYMESVKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGCENL 60
Query: 367 DPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQA 426
DP WP+S WR L VRWDE ++VSPW+I+ + S P + S R K+ R +
Sbjct: 61 DPL-WPDSSWRYLKVRWDEPSTIPRPDRVSPWKIEPASSPPVNPLVHSSRAKRPRQNVPP 119
Query: 427 PPPDYPVSARGGGV---LDFEESVRSSKVLQGQENVGFVSPLYGC----DTVNHPL---- 475
P + V + G +D ++ + VLQGQE + + L TV P+
Sbjct: 120 PSLESSVLTKEGATKVEIDSAQTQHQNSVLQGQEQMTLRNNLTESADSDSTVQKPMMWSP 179
Query: 476 --------GFEMRAPAHQSLALNGIRKDNINELVRALPTSYTG----------FVE---- 513
F+ R PA + G R+++ + A + T FV+
Sbjct: 180 SLNGKAHTHFQQR-PAMDNWMPLGRRENDFKDTRSAFKDARTASQSFGDTQGFFVQAYDD 238
Query: 514 ------------SNRF--PKVLQGQEIC-----PLRSLTGKVDLNLGTWGKPN--FGCNS 552
++RF P Q+ R+ T DL WG N +G N
Sbjct: 239 NHHRLSFKNQGSTHRFADPYFYMPQQSSVTVESSTRTQTANNDLCF--WGDQNAMYG-NP 295
Query: 553 MNMYQASKPNIYPPPSESLSNMFFPYGDMPKTVQ-HHTMPPYASNLQRENVKLNSSSIQ- 610
+ Q N PS L N FP + P+ V+ H T+ P+ RE Q
Sbjct: 296 SDQQQGF--NFGQNPSSWL-NQPFPQVEQPRVVRPHATVAPFDLEKTREGSGFKIFGFQV 352
Query: 611 -------------MPAIGAEI---RKANLLNEHKPVENIPTPTFKANMRSHKDGSFNGTA 654
+PAI + R + +NE +PV+ + +GS +
Sbjct: 353 DTTSPSPVQLSSPLPAIQEHVLQTRPSAPVNELQPVQ----------IECLPEGSVSTAG 402
Query: 655 AGCKLFGFSLTSETPTPS-SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHL 713
+ + S S SQ RSCTKVHKQG +GR++DL + Y +L +EL+ +
Sbjct: 403 TATENIQQAPQSSKDIQSKSQGASTRSCTKVHKQGVALGRSVDLSKFTDYGELQAELDKM 462
Query: 714 FNMEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
F+ EG L ++ W+I+YTD E D+M+VGDDPW EFC+ V KI+IYT+EEV+KM
Sbjct: 463 FDFEGELVSGSQNWQIVYTDDEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKM 516
>gi|310697414|gb|ADP06662.1| auxin response factor 13-1 [Solanum lycopersicum]
Length = 451
Score = 209 bits (532), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 123/306 (40%), Positives = 175/306 (57%), Gaps = 21/306 (6%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNF-DLQPQIFCKVVDVQ 118
E+W AC+G L + K G V YFP+ H+EQ+ SS IE +L P+I C+V+ ++
Sbjct: 27 EIWKACSGSLLDVSKAGERVYYFPRLHVEQLEQSSNQELIEKLQLSNLPPKILCRVLHIR 86
Query: 119 LLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKS-TPHM--FCKT 175
LL E +EVY + L+P + Q E D SP + P FCK
Sbjct: 87 LLVEHETEEVYAETILIPNQD---------QNEPTAAD-----FSPLDNPRPQFQSFCKC 132
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
LT SD ++ G SVP + A CFPPLD +Q++P QEL+AKDL G EWRF+H ++GQPRRH
Sbjct: 133 LTQSDIKSNWGLSVPLKDAVKCFPPLDMRQEKPCQELIAKDLKGNEWRFKHAHQGQPRRH 192
Query: 236 LLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVL 295
LT GWS FV+ K L++GD V+FLR + G+L +GIRR + S S+Q S VL
Sbjct: 193 SLTNGWSTFVTSKKLLAGDLVVFLRDETGKLHVGIRRLSYQHCSVGASTFSRQ-SMEVVL 251
Query: 296 SVVANAVSTKSMFHVFYSP-RATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE- 353
+V ++A +TKS+F V+ P + F++ KY + + I +G +M+ E +D
Sbjct: 252 AVASHAFATKSLFFVYQKPCYNKSSQFIMSMSKYFEGGNHGIGVGMISRMQIESEDYCHV 311
Query: 354 RRCNGV 359
RR N +
Sbjct: 312 RRTNDL 317
>gi|291196877|emb|CAX63126.1| ETTIN protein [Amborella trichopoda]
Length = 478
Score = 209 bits (531), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 169/463 (36%), Positives = 224/463 (48%), Gaps = 91/463 (19%)
Query: 407 PPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLY 466
PP + PR+ PPD G DF ESVR KVLQGQE GF P
Sbjct: 10 PPATGLKRPRISLPSIQTGCSPPD------GSRFSDFGESVRFHKVLQGQEKSGFSKPY- 62
Query: 467 GCDTVNHPLGFEMR-APAHQSLALNGIRKDNINELVRALP----TSYTGFVESNRFPKVL 521
D+ +H L R P+ S + + I + P ++ GF ES+RF KVL
Sbjct: 63 --DSSSHQLLESRRFIPSINSPMSSEFVRGAIQTPLGVGPFISSSNSIGFEESDRFHKVL 120
Query: 522 QGQEICPLRSLTGK---VDLNLGT---WGKPNFGCNSMNMYQASKPNIYPPPSESLSNMF 575
QGQEI L+S + +L++GT + P G + P +P S S
Sbjct: 121 QGQEIFHLKSQNNRERNSELSVGTLEGYPIPITGERWSVLPLQGHPAQFP---LSPSTPR 177
Query: 576 FPYGDMPK---TVQHHTMPPYASNLQRENVKLN---SSSIQMPAIGAEIRKANLLNEHKP 629
FP + + + H PP +++ S + + A G E+ K L NE P
Sbjct: 178 FPTPSLLRFHGSGSHLLHPPLVPQDINNTLRIAEQPSGNFSLLACG-EVSKGPL-NE-SP 234
Query: 630 VENI------------PTPTFKANMRSHKDGSFNGTAAGCKLFGFSLTSETP-------- 669
+++ PT F+ +++ KDG+ N + C+LFGFSLT E P
Sbjct: 235 CDSLKKKSQAPDVCAPPTDAFRVDIKDGKDGATNARNSCCRLFGFSLTEEPPLSNEAMDP 294
Query: 670 ---------------------------TPSSQSPGK---------RSCTKVHKQGSLVGR 693
T QS K RSCTKVHKQGS+VGR
Sbjct: 295 AHVSLSSNDDFNSKSSFQPSTWTVSCETQQKQSESKSQCLNKTANRSCTKVHKQGSMVGR 354
Query: 694 AIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEV 753
AI+L + GY+DL+SELE LFNMEGLL DP KGW+++YTDS++D+M+VGDDPW EFCN V
Sbjct: 355 AINLSKFEGYDDLISELERLFNMEGLLNDPKKGWQVVYTDSDDDMMLVGDDPWQEFCNIV 414
Query: 754 SKIHIYTQEEVEKM--TIGTTDDTQSCLDQAPVIMEVSVSKSS 794
SKI IYT +EVEKM + +DD QSC ++AP SKSS
Sbjct: 415 SKILIYTHDEVEKMIPVVVASDDAQSCSEEAPTTT-TEASKSS 456
>gi|353703790|ref|NP_001238801.1| auxin response factor 13 [Solanum lycopersicum]
gi|310697412|gb|ADP06661.1| auxin response factor 13 [Solanum lycopersicum]
Length = 472
Score = 208 bits (530), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 123/306 (40%), Positives = 175/306 (57%), Gaps = 21/306 (6%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNF-DLQPQIFCKVVDVQ 118
E+W AC+G L + K G V YFP+ H+EQ+ SS IE +L P+I C+V+ ++
Sbjct: 27 EIWKACSGSLLDVSKAGERVYYFPRLHVEQLEQSSNQELIEKLQLSNLPPKILCRVLHIR 86
Query: 119 LLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKS-TPHM--FCKT 175
LL E +EVY + L+P + Q E D SP + P FCK
Sbjct: 87 LLVEHETEEVYAETILIPNQD---------QNEPTAAD-----FSPLDNPRPQFQSFCKC 132
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
LT SD ++ G SVP + A CFPPLD +Q++P QEL+AKDL G EWRF+H ++GQPRRH
Sbjct: 133 LTQSDIKSNWGLSVPLKDAVKCFPPLDMRQEKPCQELIAKDLKGNEWRFKHAHQGQPRRH 192
Query: 236 LLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVL 295
LT GWS FV+ K L++GD V+FLR + G+L +GIRR + S S+Q S VL
Sbjct: 193 SLTNGWSTFVTSKKLLAGDLVVFLRDETGKLHVGIRRLSYQHCSVGASTFSRQ-SMEVVL 251
Query: 296 SVVANAVSTKSMFHVFYSP-RATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE- 353
+V ++A +TKS+F V+ P + F++ KY + + I +G +M+ E +D
Sbjct: 252 AVASHAFATKSLFFVYQKPCYNKSSQFIMSMSKYFEGGNHGIGVGMISRMQIESEDYCHV 311
Query: 354 RRCNGV 359
RR N +
Sbjct: 312 RRTNDL 317
>gi|24785191|dbj|BAC23059.1| hypothetical protein [Nicotiana tabacum]
Length = 648
Score = 208 bits (529), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 117/303 (38%), Positives = 173/303 (57%), Gaps = 16/303 (5%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQP-QIFCKVVDVQ 118
E+W AC+G L +PK G V YFP+ H++Q+ SS I+ P +I C+V+ ++
Sbjct: 23 EIWRACSGSLLDVPKLGERVHYFPRLHMDQLEQSSNLEWIQGLQLSHLPRKILCRVLHIR 82
Query: 119 LLANKENDEVYTQVALLP-QPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
LL + +EVY + LLP Q + E E LE P + FCK LT
Sbjct: 83 LLVEHDTEEVYAETILLPNQEQNEPSTPEFCPLE------------PPRPQYQSFCKALT 130
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
SD ++ G SV R+ A CFPPLD Q++P+QEL+ DL G EWRF+H+++GQPRRHLL
Sbjct: 131 TSDIKSNWGLSVHRKDANKCFPPLDMMQEKPTQELIVNDLQGNEWRFKHVFQGQPRRHLL 190
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSV 297
GWS FV+ K L++GD V+FLR + G+L +GIRR N + S S+Q S VL+V
Sbjct: 191 KHGWSTFVTSKKLLAGDLVVFLRDETGKLHVGIRRLSYQCNSVGSSTFSRQ-SMEGVLAV 249
Query: 298 VANAVSTKSMFHVFYSPRATH-ADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRC 356
++A +T+S+F V+Y P + F++ Y + + +GT + + DS +R
Sbjct: 250 ASHAFATRSLFSVYYKPCYNRSSQFIMSLSNYFEGGNHGPGVGTISRTQHTSLDSHVKRT 309
Query: 357 NGV 359
+G+
Sbjct: 310 SGM 312
>gi|357461711|ref|XP_003601137.1| Auxin response factor [Medicago truncatula]
gi|355490185|gb|AES71388.1| Auxin response factor [Medicago truncatula]
Length = 593
Score = 207 bits (527), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 140/402 (34%), Positives = 193/402 (48%), Gaps = 49/402 (12%)
Query: 54 SSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCK 113
+SS+ +LW A AG +P + V YFPQGH++Q S P +P I C
Sbjct: 13 ASSLNPKLWRAIAGAAVQIPTVNSRVYYFPQGHMDQATSLPN---NLSPLLLSRPYILCS 69
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFC 173
V V LA+ + DEV+ ++ L P LN + V E G + F
Sbjct: 70 VSAVHFLADPKTDEVFAKLFLQP------LNDFTVNFPRIPVIEADDGERISS-----FA 118
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
K LT SD + GGFSVPR A+ FPPLDY P Q L+ D+HG+ W FRHIYRG PR
Sbjct: 119 KILTPSDANNGGGFSVPRFCADSIFPPLDYSMDPPLQNLLITDVHGLTWEFRHIYRGTPR 178
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQ--------------PRNG 279
RHLLTTGWS FV+ K LV+GD+V+F++ G + +GIRR+V+ R
Sbjct: 179 RHLLTTGWSKFVNAKKLVAGDSVVFMKNTRGAMFIGIRRAVRFVPNRTSSGVCSDVSRLC 238
Query: 280 LP----------DSILSKQNSY---------PNVLSVVANAVSTKSMFHVFYSPRATHAD 320
LP + L ++ ++ P ++ A + F V Y PRA +D
Sbjct: 239 LPICGVRSRVDDEEKLVEEKAFSRHGKGKLSPVAVAEAAEMAAQGMGFEVVYYPRAGWSD 298
Query: 321 FVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRC-NGVVTGITDLDPYRWPNSKWRCL 379
FV+ + + C G R KM E DDS GVV+ ++ D W S WR L
Sbjct: 299 FVLKAEVVDAAMSVTWCPGMRIKMAVETDDSSRTTWFQGVVSQVSVPDHGAWRGSPWRML 358
Query: 380 MVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLR 421
+ WDE + VSPW+++ + P L P +K+ R
Sbjct: 359 HITWDEPEVLQTSKWVSPWQVELLSTTPSLHTPFPP-LKRTR 399
>gi|326529683|dbj|BAK04788.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 529
Score = 204 bits (520), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 136/377 (36%), Positives = 186/377 (49%), Gaps = 58/377 (15%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
++W ACA PL+ +P G+ V YFP GH EQ + P P +L P C V V+L
Sbjct: 26 DVWLACATPLSRVPVVGSQVYYFPHGHSEQCPT-----PPRAPAHNLFP---CTVAAVRL 77
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
A+ + DE + V+L+P P A L R P + + K LT S
Sbjct: 78 FADPKTDEPFATVSLVPGPH----RAPAPDLP------HASARRPEPTAFRYYAKQLTQS 127
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + GGFSVPR AE FPPLD++ P Q L D G W FRHIYRG PRRHLLTT
Sbjct: 128 DANNGGGFSVPRFCAELVFPPLDFEADPPVQRLRMTDPLGKHWDFRHIYRGTPRRHLLTT 187
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRS------------VQPRNGLPDSILSK 287
GWS FV+ K LV+GDAV+F+R DGEL GIRR+ +PRN ++
Sbjct: 188 GWSKFVNAKLLVAGDAVVFMRRADGELLTGIRRAPRFPAVSQQGPERRPRN-------AR 240
Query: 288 QNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFE 347
P + + + F V Y PR +FV+P Q+ + ++ G + +M+F
Sbjct: 241 ARVPPQEVDDAVRLAAEGAPFTVTYYPRQGAGEFVVPKQEVEEALVGAWRPGVQVRMKFL 300
Query: 348 MDDSPERR---CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSV 404
D+ ERR NGVV + DP + WR L + W E + V+ W+++ V
Sbjct: 301 --DAEERRSEWINGVVKAV---DP-----NIWRMLEINWAESVAGSLNRYVNAWQVEH-V 349
Query: 405 SLPPLSIQSSPRMKKLR 421
PP+ +KKL+
Sbjct: 350 GHPPI-------LKKLK 359
>gi|326521704|dbj|BAK00428.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 476
Score = 204 bits (519), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 159/494 (32%), Positives = 234/494 (47%), Gaps = 89/494 (18%)
Query: 260 RGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHA 319
RG DGELRLG+RR+VQ +NG L Q S L+ V +AVSTKSMF +FY+PR + +
Sbjct: 12 RGDDGELRLGVRRAVQLKNGSAFPALYSQCSNLGTLANVTHAVSTKSMFQIFYNPRLSQS 71
Query: 320 DFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCL 379
+F++PY K+ K I P +G RFKMR+E +D+ ERR G++TG D DP RW SKW+CL
Sbjct: 72 EFIVPYWKFTKSISQPFSVGWRFKMRYESEDAAERRYTGIITGTVDADP-RWRGSKWKCL 130
Query: 380 MVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGG 439
+VRWD+ ++SPWEI+ + S S ++P K+++ L P+Y V GGG
Sbjct: 131 LVRWDDDGEFRRPNRLSPWEIELT-SAASGSHLAAPTSKRMKPYLPHANPEYTVPY-GGG 188
Query: 440 VLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHPLGFEMRAPAHQSLALNGIRKDNINE 499
DF ES + KVLQGQE +G+ + + P A Q + G + N
Sbjct: 189 RPDFAESAQLRKVLQGQELLGYRTHDGTAVATSQPC----EARNLQYIDERGCSNNGSNN 244
Query: 500 LVRALPT-----------SYTGFVESNRFPKVLQGQEIC-PLRSLTGKVDLNLGTWGKPN 547
++ +P+ +GF ES RF KVLQGQE+ P R + G + + +
Sbjct: 245 VLGGVPSHGVRTPLGIPYHCSGFGESQRFQKVLQGQEVFRPYRGSLVDARMRSGGFHQQD 304
Query: 548 --FGCNSMNMYQASKPNI--YPPPSE---------------------SLSNMFFPYGDMP 582
+ ++ ++A + + Y PP++ +S F +G M
Sbjct: 305 GPYASALLDKWRAQQQHAFGYGPPAQVLPSQPSLSPPSVLMFQKADPKVSRFEFGHGHMD 364
Query: 583 KTVQHHTMPPYASNLQRENV-KLNSSSIQMPAIGAEIRKANLLNEHKPVENI-PTPTFKA 640
K YA + E V + +S P +G+ +++ VEN PT
Sbjct: 365 KNEDDW----YARFVSAEGVGRAEQASSLRPHLGS----GEVIDSRVAVENTGAAPT--- 413
Query: 641 NMRSHKDGSFNGTAAGCKLFGFSLTSE-----------------TPTPSSQSPGKRSCTK 683
CK+FG SL + +PT +S G SC
Sbjct: 414 --------------NSCKIFGISLAEKVRARDEMVCDDGGANYSSPTQPLKSLGN-SCAT 458
Query: 684 VHKQGSLVGRAIDL 697
VH+Q +VGRAID+
Sbjct: 459 VHEQRPVVGRAIDV 472
>gi|356507684|ref|XP_003522594.1| PREDICTED: uncharacterized protein LOC100793208 [Glycine max]
Length = 1160
Score = 201 bits (510), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 130/393 (33%), Positives = 188/393 (47%), Gaps = 39/393 (9%)
Query: 61 LWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQLL 120
LW CAG +P + V YFPQGH +Q +S+ P P +P + C+V VQ L
Sbjct: 20 LWLVCAGTTVEIPTLHSRVYYFPQGHFDQASSA---PRNLSPLLLSKPAVLCRVESVQFL 76
Query: 121 ANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASD 180
A+ DEV+ ++ L P + A + G + F K LTASD
Sbjct: 77 ADPLTDEVFAKLILHPVADCFASGPSAVAPAAASASAQTGENNVVS-----FSKVLTASD 131
Query: 181 TSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTG 240
+ GGFSVPR A+ FPPL+++ P Q L+ D+HG W FRHIYRG PRRHLLTTG
Sbjct: 132 ANNGGGFSVPRFCADSIFPPLNFQADPPVQNLLVTDVHGFVWEFRHIYRGTPRRHLLTTG 191
Query: 241 WSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQ-------PRNGLPDSI------LSK 287
WS FV+ K LV+GD V+F++ G L +GIRR+ + R G+ + +
Sbjct: 192 WSTFVNNKKLVAGDVVVFMKNSGGGLFVGIRRATRFSMGKGGDRGGMRIRVDEEEEEEEE 251
Query: 288 QNSYPNVLSVVA----NAVSTKSM------------FHVFYSPRATHADFVIPYQKYVKI 331
+ V V + +S K + F V Y P+ ++FV+ + +
Sbjct: 252 EEEEEEVREVFSRDGRGKLSAKVVAEAAELAARNMPFEVVYYPKERWSEFVVKTEAVNEA 311
Query: 332 IMNPICIGTRFKMRFEMDDSPERR-CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSD 390
+ G R K+ E DDS C G V+ + +W S WR L V WDE G
Sbjct: 312 MKVAWSPGIRVKIAAETDDSSRVSWCQGTVSSVALHGNGQWRGSLWRMLQVTWDEPEGLQ 371
Query: 391 HQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTG 423
+ VSPW+++ + P L + P +K+++
Sbjct: 372 IAKWVSPWQVELVSTTPALH-SAFPPIKRIKAA 403
>gi|356550817|ref|XP_003543780.1| PREDICTED: auxin response factor 17-like [Glycine max]
Length = 551
Score = 200 bits (508), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 137/382 (35%), Positives = 192/382 (50%), Gaps = 41/382 (10%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
++W ACAG +PK + V YFPQGH+E + S P+ P + C V +
Sbjct: 12 KIWRACAGAAVQIPKLHSRVYYFPQGHMEHASPSHYLSPL----IRSLPFVPCHVSSLDF 67
Query: 120 LANKENDEVYTQVALLP-----QPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCK 174
LA+ +DEV+ + L P Q + EA+ +D E G S F K
Sbjct: 68 LADPFSDEVFAKFLLTPLSQSQQQPFQNDTKEARNDDDDEDRENNGVVS--------FAK 119
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
LT SD + GGFSVPR A+ CFPPLD++ P Q L D+HGVEWRFRHIYRG PRR
Sbjct: 120 ILTPSDANNGGGFSVPRFCADSCFPPLDFRADPPVQLLSVADIHGVEWRFRHIYRGTPRR 179
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQP-----------RNGLPDS 283
HL TTGWS FV+ K LV+GD V+F++ DG + +GIRR+ + R G S
Sbjct: 180 HLFTTGWSKFVNHKKLVAGDTVVFVKDSDGIVSVGIRRAARFAAAIETPPPAEREGFSRS 239
Query: 284 ILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFK 343
+ + ++ A + + + F V Y PR ADFV+ + + + G R K
Sbjct: 240 TTGRVTA--EAVAAAAESAARNAPFEVVYYPRTGFADFVVSAEVVEESMKCAWVGGMRVK 297
Query: 344 MRFEMDDSPERRC-NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDR 402
+ E +DS G V+ + N WR L V WDE + +QVSPW+++
Sbjct: 298 ISMETEDSSRMTWYQGTVSSACASE-----NGPWRMLQVNWDEPEVLQNAKQVSPWQVE- 351
Query: 403 SVSLPPLSIQS--SPRMKKLRT 422
+ PP ++ + SP K+LR
Sbjct: 352 -LVSPPFALHTVFSPN-KRLRA 371
>gi|10086460|gb|AAG12520.1|AC015446_1 Similar to Auxin response factor 9 [Arabidopsis thaliana]
Length = 479
Score = 199 bits (505), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 111/328 (33%), Positives = 167/328 (50%), Gaps = 68/328 (20%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEV-PNFDLQPQIFCKVV 115
+Y +LW+ CAGPL LPK G V YFPQGH+E + +S+ + P FDL ++ C+VV
Sbjct: 18 MYEKLWNICAGPLCVLPKPGEKVYYFPQGHIELIENSTRDELDHIRPIFDLPSKLRCRVV 77
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKT 175
+ R K+T ++ +
Sbjct: 78 AID-------------------------------------------RKVDKNTDEVYAQI 94
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
DT+ D Q +Q LVAKDL+G EW F+H++RG P+RH
Sbjct: 95 SLMPDTT-------------------DMSQPISTQNLVAKDLYGQEWSFKHVFRGTPQRH 135
Query: 236 LLTTG--WSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPN 293
+ T+G WS+F + K L+ GD + LRG++GELR GIRR+ + +P S++S
Sbjct: 136 MFTSGGGWSVFATTKRLIVGDIFVLLRGENGELRFGIRRAKHQQGHIPSSVISANCMQHG 195
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
V++ V NA TK MF+V Y P ++ FVI Y K+V + N +G+RF+M+FE D E
Sbjct: 196 VIASVVNAFKTKCMFNVVYKPSSSQ--FVISYDKFVDAMNNNYIVGSRFRMQFEGKDFSE 253
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMV 381
+R +G + G+ D+ P+ W +S+WR L +
Sbjct: 254 KRYDGTIIGVNDMSPH-WKDSEWRSLKI 280
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 76/139 (54%), Gaps = 20/139 (14%)
Query: 633 IPTPTFKAN--MRSHKDGSFNGTAAGCKLFGFSLTSETPTPSSQSPGKRSCTKVHKQGSL 690
IP + ++ ++ K+ C LFG LT KVH QG
Sbjct: 335 IPNENYNSDQMIQPRKEDITTEATTSCLLFGVDLT-----------------KVHMQGVA 377
Query: 691 VGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFC 750
+ RA+DL ++GYN L+ +LE LF+++ LR + W I++T++E M+VGDDPW EFC
Sbjct: 378 ISRAVDLTAMHGYNQLIQKLEELFDLKDELRTRNQ-WEIVFTNNEGAEMLVGDDPWPEFC 436
Query: 751 NEVSKIHIYTQEEVEKMTI 769
N +I I ++EE++KM +
Sbjct: 437 NMAKRIFICSKEEIKKMKL 455
>gi|357162852|ref|XP_003579544.1| PREDICTED: auxin response factor 13-like [Brachypodium distachyon]
Length = 502
Score = 198 bits (503), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 138/371 (37%), Positives = 188/371 (50%), Gaps = 49/371 (13%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
++W ACA PL+ LP G V YFP GH EQ ++ A P +P+ L P C V V L
Sbjct: 14 DVWLACATPLSRLPAVGAQVYYFPHGHSEQCPTALAAP---LPHPHLFP---CTVAAVAL 67
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHM--FCKTLT 177
A+ DE + ++L+P P + L GGG P + K LT
Sbjct: 68 SADPSTDEPFATISLVPGPH--------RAL--------GGGAPHHAVDPAFAHYAKQLT 111
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
SD + GGFSVPR A+ FP LD+ P Q L +DL G W FRHIYRG PRRHLL
Sbjct: 112 QSDANNGGGFSVPRFCADSVFPGLDFDADPPVQTLRMRDLLGKLWEFRHIYRGTPRRHLL 171
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLP-DSILSKQNSYPNV-- 294
TTGWS FV+ K LV+GDAV+F+R DGEL G+RR+ PR + D +N+ V
Sbjct: 172 TTGWSRFVNAKLLVAGDAVVFMRRPDGELLAGVRRT--PRYPVSQDPAEPPRNARARVPA 229
Query: 295 --LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRF-EMDDS 351
+ A + + F V Y PR +FV+P ++ +++P GT+ +M+F +D
Sbjct: 230 QEVEDAARRAAQGAPFTVTYYPRQGAGEFVVPRKEVEDALISPWEPGTQVRMQFLHPEDR 289
Query: 352 PERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECI-GSDHQEQVSPWEIDRSVSLPPLS 410
NGVV + +S WR L + WDE S V+ W++ + V PPL
Sbjct: 290 RSEWINGVVRAVD--------HSIWRMLEIDWDESAPPSLKNRHVNAWQV-QLVGCPPL- 339
Query: 411 IQSSPRMKKLR 421
+K+LR
Sbjct: 340 ------LKRLR 344
>gi|147843289|emb|CAN80533.1| hypothetical protein VITISV_030510 [Vitis vinifera]
Length = 624
Score = 196 bits (499), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 132/395 (33%), Positives = 189/395 (47%), Gaps = 62/395 (15%)
Query: 61 LWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQLL 120
+W ACAG +P + V YFPQGH+EQ +S PP+ P +P + C+VV V L
Sbjct: 16 IWRACAGKSVHIPAVHSRVYYFPQGHVEQASS----PPVLSPLVFSKPSVLCRVVAVWFL 71
Query: 121 ANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHM-FCKTLTAS 179
A+++ DEV+ ++ L P G + E+ +E V + + M F K LT+S
Sbjct: 72 ADQDTDEVFAKIRLEPV----GRSWESGTMERRRVGDGDDDKEDEGEDKVMSFVKILTSS 127
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + GGFSVPR A+ FPPL+++ P Q L+ DL G +W FRHIYRG PRRHLLTT
Sbjct: 128 DANNGGGFSVPRFCADYIFPPLNFQADPPVQHLLFTDLRGTKWDFRHIYRGTPRRHLLTT 187
Query: 240 GWSIFVSQKNLVSGDAVLFL-RGKDGELRLGIRRSVQ-PRNG--------LPDSILSKQN 289
GWS FV+ K LV+GD+V+F+ R + EL +G+RR + RNG L ++ +K+
Sbjct: 188 GWSKFVNDKKLVAGDSVVFMKRNSNSELFIGVRRDARWNRNGERWSFRSALAGAVKAKEV 247
Query: 290 SYPNVLSVVANAVSTKSM-------------FHVFYSPRATHADFVIPYQKYVKIIMNPI 336
S ++ F V Y PR +DFV+ + + +
Sbjct: 248 GSIEGFSRSSSGRVRAEEVAVAAELAAQGMPFEVVYYPRVGSSDFVVKAEVVEEALSVFW 307
Query: 337 CIGTRFKMRFEMDDSPERRC-NGVVTGITDLDPYRWPNSKWRCLM--------------- 380
G R KM E +DS + G V+ T +D W S WR L
Sbjct: 308 TGGMRVKMAMETEDSSKTSLFQGTVSSATVMDNGPWRGSLWRMLQTWSYLQDTKMRSLIV 367
Query: 381 --------------VRWDECIGSDHQEQVSPWEID 401
V WDE + +VSPW+++
Sbjct: 368 TFFSGLLVLDLYVKVTWDEPEVLQNVMRVSPWQVE 402
>gi|350536255|ref|NP_001234237.1| auxin response factor 17 [Solanum lycopersicum]
gi|313509556|gb|ADR66030.1| auxin response factor 17 [Solanum lycopersicum]
Length = 622
Score = 195 bits (496), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 129/386 (33%), Positives = 190/386 (49%), Gaps = 48/386 (12%)
Query: 61 LWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQLL 120
+W A AG +P G V YFPQGH E +S P + P + I C+V+ V+ L
Sbjct: 15 VWRAIAGNSVKIPPVGTRVYYFPQGHAEHATFTS--PAVMSPG--MPAFILCRVLSVRFL 70
Query: 121 ANKENDEVYTQVALLP--QPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTA 178
A + DEVY ++ L P Q E++ + + +++ + F K LT
Sbjct: 71 AESDTDEVYARIFLHPISQSEVDEVTMREEEV--------------VEDEIVSFVKILTP 116
Query: 179 SDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLT 238
SD + GGFSVPR A+ +P LD+ + P Q L +D+ GV W FRHIYRG PRRHLLT
Sbjct: 117 SDANNGGGFSVPRFCADSIYPRLDFGAEPPVQNLSIRDIKGVAWEFRHIYRGTPRRHLLT 176
Query: 239 TGWSIFVSQKNLVSGDAVLFL-RGKDGELRLGIRRSVQPRNG----LPDSILSKQN---- 289
TGWS FV+ K LV+GD+ +F+ R + +L +G+RR+++ RN S L +++
Sbjct: 177 TGWSKFVNSKQLVAGDSAVFMRRTANNQLYVGVRRAIR-RNDDSQKWTSSFLMREHINNG 235
Query: 290 SYPNVLSVVANAVSTKSM-------------FHVFYSPRATHADFVIPYQKYVKIIMNPI 336
P+V + T F V PR A FV+ Q+ + P
Sbjct: 236 GSPDVSWGIRKGRMTMEAVAAVAEKAARGVPFEVSCYPRDAWAGFVVKAQEVQMALNMPW 295
Query: 337 CIGTRFKMRFEMDDSPERRC-NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQV 395
+G R KM E +DS C G V+ + + W S WR L + W+E H +V
Sbjct: 296 TVGMRVKMAVEAEDSSRTACYQGTVSSVILNESGPWRGSPWRMLQITWEEPEVPQHANRV 355
Query: 396 SPWEIDRSVSLPPLSIQSSPRMKKLR 421
+PW+++ PP+ Q P KK++
Sbjct: 356 NPWQVE---CFPPIP-QFLPPSKKIK 377
>gi|8778678|gb|AAF79686.1|AC022314_27 F9C16.11 [Arabidopsis thaliana]
Length = 330
Score = 195 bits (495), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 118/355 (33%), Positives = 177/355 (49%), Gaps = 65/355 (18%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEV-PNFDLQPQIFCKVV 115
+Y +LW CAGPL +PK G V YFPQGH+E V +S+ E+ PN DL ++ C+V+
Sbjct: 1 MYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPNCDLPSKLQCRVI 60
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKT 175
+ L +DE Y ++ L+P + +K L+ + E P ++ F K
Sbjct: 61 AIHLKVENNSDETYVEITLMPDTTV------SKNLQVVIPTENENQFRPIVNS---FTKV 111
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPL-----DYKQQRPSQELVAKDLHGVEWRFRHIYRG 230
LTASDTS G FSVP + A +C PPL D Q P+QEL+A DLHG +WRF+H YR
Sbjct: 112 LTASDTSAQGEFSVPCKHAIECLPPLLFYFIDMSQPIPAQELIAIDLHGNQWRFKHSYR- 170
Query: 231 QPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNS 290
GD ++F R +R G
Sbjct: 171 ----------------------GDVIVFARYNIESMRHG--------------------- 187
Query: 291 YPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDD 350
V++ +A + MF + Y PR++ +++ ++K++ + N +G+++ MRFE DD
Sbjct: 188 ---VIASAKHAFDNQCMFIMVYKPRSSQ--YIVSHEKFLDAVNNKFNVGSKYTMRFEDDD 242
Query: 351 SPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVS 405
E R G + GI+D P+ W S+WR L V+WDE ++VSPW+I +S
Sbjct: 243 LSETRYFGTIIGISDFSPH-WKCSEWRSLEVQWDEFASFPRPKKVSPWDIKHLMS 296
>gi|357486991|ref|XP_003613783.1| Auxin response factor [Medicago truncatula]
gi|355515118|gb|AES96741.1| Auxin response factor [Medicago truncatula]
Length = 524
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 134/365 (36%), Positives = 187/365 (51%), Gaps = 28/365 (7%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDL-QPQIFCKVVDVQ 118
++W CAG +PK + V YFP GHLE + S P + + D +P I C V V
Sbjct: 11 KIWQCCAGSSVKIPKLYSHVYYFPLGHLEHICPSPN--PNTLSHLDRSRPFILCTVSAVD 68
Query: 119 LLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTA 178
LLA+ DEV+ ++ L P N + L V E+ S + KTLT
Sbjct: 69 LLADLCTDEVFVKLLLTPV-----TNKGVHEPHSLEVREDKDDDKKVVS----YSKTLTP 119
Query: 179 SDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLT 238
SD + G FSVP A+ FPPLD ++P QEL D+HG W+FRH+YRG P RHLLT
Sbjct: 120 SDANNGGAFSVPVECAKLIFPPLDLNTEKPFQELSISDIHGKVWKFRHVYRGTPLRHLLT 179
Query: 239 TGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVV 298
T WS FV +K LV GD+++F++ DG + +G+RR Q + G I K S+ + +
Sbjct: 180 TDWSEFVDKKRLVGGDSLIFMKDSDGNISVGVRR--QTKFGGAAKITEK--SFTEAVELA 235
Query: 299 ANAVSTKSMFHVFYSPRATH-ADFVIPYQKYVKIIMN-PICIGTRFKMRFEMDDSPERRC 356
++ F V Y P A +FV+ K V+ MN +G R ++ + DS +RC
Sbjct: 236 DKNLA----FEVVYYPTAKGWCNFVVD-AKVVEDAMNISWSLGVRIELSSKNYDS-SKRC 289
Query: 357 NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPR 416
+ I+ L PN WR L V+WDE S E+VSPWE++ + L Q P
Sbjct: 290 SKFEGTISALSA---PNCPWRMLEVKWDEPKVSQVPERVSPWEVETISDIFALHPQFHP- 345
Query: 417 MKKLR 421
KKL+
Sbjct: 346 TKKLK 350
>gi|357489255|ref|XP_003614915.1| Auxin response factor [Medicago truncatula]
gi|355516250|gb|AES97873.1| Auxin response factor [Medicago truncatula]
Length = 521
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 129/390 (33%), Positives = 193/390 (49%), Gaps = 53/390 (13%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
++W CAGP ++PK + V YFP GHLE S I V + P C + V L
Sbjct: 12 KIWQTCAGPSVNVPKVRSKVYYFPHGHLEHACPSPNPQTITVID-GYGPSFPCIITAVDL 70
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
LA+ DEV+ ++ L P E ++ ++ VDEE G S F KTLT S
Sbjct: 71 LADPHTDEVFAKLLLSPV-------TEGQEFPEV-VDEEDDGGDKFVS----FVKTLTKS 118
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D++ GGFSVPR A+ FP LD PSQ+L D+H W+F H+YRG+P+RHL TT
Sbjct: 119 DSNNGGGFSVPRICADLIFPKLDLNSPFPSQQLSVTDVHDRVWKFAHVYRGRPKRHLFTT 178
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILS-KQNSYPNVLSV- 297
GW+ FV+ K LV+GD+++F++ G++ +GIRR+++ ++ + K+ N L V
Sbjct: 179 GWTPFVNTKKLVAGDSIVFMKNTAGDIVVGIRRNIKFAAAETKAVNNKKEEGKENGLEVK 238
Query: 298 -----------------VANAVSTKS---MFHVFYSPRATHADFVIPYQKYVKIIMNPIC 337
V AV F V Y PRA +FV+ +
Sbjct: 239 REGFSRGGRRGMLTEKAVIEAVELAEKNLAFEVIYYPRANWCNFVVDANVVDDAMKIGWA 298
Query: 338 IGTRFKMRFEMDDSPERRCN-----GVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQ 392
G R K+ ++D+S + G ++ ++ + PN WR L V WDE +Q
Sbjct: 299 SGMRVKLPLKIDESSNSKMTFFQPQGTISNVSSV-----PN--WRMLQVNWDELEILQNQ 351
Query: 393 EQVSPWEIDR-----SVSLPPLSIQSSPRM 417
+V+PW+++ +V LP LS + PR+
Sbjct: 352 NRVNPWQVELISHTPAVHLPFLSTK-KPRL 380
>gi|224084816|ref|XP_002307410.1| predicted protein [Populus trichocarpa]
gi|222856859|gb|EEE94406.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 190 bits (483), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 101/219 (46%), Positives = 134/219 (61%), Gaps = 7/219 (3%)
Query: 61 LWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDL-QPQIFCKVVDVQL 119
+W ACAG +P + V YFPQGHLEQ +SS+A P + N L +P I C++ V
Sbjct: 1 IWRACAGSSVQIPTINSRVYYFPQGHLEQSSSSTAPHPPFLSNLALSKPLISCQISAVDF 60
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPH---MFCKTL 176
LA+ DEV+ ++ LLP NL LE EGGG + + F K L
Sbjct: 61 LADPVTDEVFIRLLLLPLNN-HSCNLPLSFLEP--SRSEGGGVNDVDDDENKILAFAKIL 117
Query: 177 TASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHL 236
T SD + GGFSVPR A+ FPPL+Y+ + P Q L D+HG+ W FRHIYRG PRRHL
Sbjct: 118 TPSDANNGGGFSVPRFCADSIFPPLNYQAEPPVQTLTVTDIHGISWDFRHIYRGTPRRHL 177
Query: 237 LTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQ 275
LTTGWS FV+ K L++GD+V+F+R GE+ +G+RR+V+
Sbjct: 178 LTTGWSKFVNNKKLIAGDSVVFMRNLKGEMFIGVRRAVR 216
>gi|449466452|ref|XP_004150940.1| PREDICTED: auxin response factor 17-like [Cucumis sativus]
gi|449524098|ref|XP_004169060.1| PREDICTED: auxin response factor 17-like [Cucumis sativus]
Length = 550
Score = 190 bits (483), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 128/370 (34%), Positives = 180/370 (48%), Gaps = 39/370 (10%)
Query: 61 LWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQLL 120
LW A +G + G+ V YF QGHLEQ + + P + P C V
Sbjct: 6 LWRAFSGNSAHIHTVGSEVYYFVQGHLEQ----ATYVPTLSRSVLSNPITKCIVSAADYT 61
Query: 121 ANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASD 180
A+ +DEV ++ L P P + + ++ + ++G G+ ++ F K LT+SD
Sbjct: 62 ADPLSDEVCLKLNLNPIPPGQSV---SQVVHPFSSCDDGNGQ---RNRIEKFAKVLTSSD 115
Query: 181 TSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTG 240
+ GGFSVPR A+ FPPL+Y+ + P Q L D+HGV W FRHIYRG PRRHLLTTG
Sbjct: 116 ANNGGGFSVPRFCADSIFPPLNYQVEPPVQTLAITDVHGVVWNFRHIYRGTPRRHLLTTG 175
Query: 241 WSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQ------------ 288
WS FV+ K L++GDAV+F R ++ +GIRRS + G S + Q
Sbjct: 176 WSKFVNNKKLIAGDAVIFARDSSRDIFVGIRRSSKSSGGGDCSKWNSQVGGGGRCNVEEK 235
Query: 289 ---------NSYPNVLSVVANAVSTKSM-------FHVFYSPRATHADFVIPYQKYVKII 332
+ N+ V A V+T + F V Y PR ++FVIP +K +
Sbjct: 236 RSGDRSTDVFTRTNIGKVPAETVATAAELAAEFKPFEVVYYPRIGTSEFVIPAEKVNNSL 295
Query: 333 MNPICIGTRFKMRFEMDDSPERRC-NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDH 391
G R KM E +DS + + G VT + W S WR L V W+E
Sbjct: 296 NYQWYPGIRVKMPVETEDSLKTQWYQGTVTSASVPIQGPWKGSPWRMLEVTWEETDALQS 355
Query: 392 QEQVSPWEID 401
+ VSPWE++
Sbjct: 356 AKFVSPWEVE 365
>gi|379323228|gb|AFD01313.1| auxin response factor 17-1 [Brassica rapa subsp. pekinensis]
Length = 546
Score = 189 bits (481), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 123/355 (34%), Positives = 174/355 (49%), Gaps = 30/355 (8%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
++W ACAG +P + V YFPQGH+E SS + +F + C V V+L
Sbjct: 18 QIWRACAGASVQIPSLYSRVYYFPQGHVEHSCPSSL-----ISSFSTAAPVPCVVSAVEL 72
Query: 120 LANKENDEVYTQVALLP-QPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHM-FCKTLT 177
LA+ DEV+ +AL P PE + G D++ S + + F K LT
Sbjct: 73 LADPITDEVFAHLALQPISPE----HFSPSNFSGFGSDDDDDNNSNSNKNKVVTFAKILT 128
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
SD + GGFSVPR A+ FPPLD+ P Q+L D+HGV W FRHIYRG PRRHLL
Sbjct: 129 PSDANNGGGFSVPRYCADSVFPPLDFHADPPVQKLFITDIHGVVWDFRHIYRGTPRRHLL 188
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRS----------VQPRNGLPDSILSK 287
TTGWS FV+ K L++GD+V+F+R E+ +G+RR+ + G + K
Sbjct: 189 TTGWSKFVNGKKLIAGDSVVFMRKSVDEMFIGVRRAPISNHGDEYYGGGKKGFRRIGMGK 248
Query: 288 QNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFE 347
+ +S N F V Y P A +DFV+ + + GTR KM E
Sbjct: 249 LTA--EAVSEAVNKAVQGYPFEVVYYPTAGWSDFVVRAEDVEVFMAGYWSPGTRVKMAME 306
Query: 348 MDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
+DS GVV+ W+ L + WDE + ++V+PW+++
Sbjct: 307 TEDSSRVTWFQGVVSSTFQ------ETGLWKQLQITWDEPEILQNLKRVNPWQVE 355
>gi|359473508|ref|XP_003631311.1| PREDICTED: LOW QUALITY PROTEIN: auxin response factor 7-like [Vitis
vinifera]
Length = 247
Score = 188 bits (478), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 102/237 (43%), Positives = 135/237 (56%), Gaps = 47/237 (19%)
Query: 46 NSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNF 104
N S +++ ++Y ELWHAC PL ++P + V YFPQGH+E + AS ++P+F
Sbjct: 25 NGSKLGTVNIALYKELWHACTXPLVNIPHEXERVYYFPQGHMEXLEASMHQELDQKMPSF 84
Query: 105 DLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSP 164
+L +I CK V+ ++ +
Sbjct: 85 NLPSKILCKXVNF----------IHNCIV------------------------------- 103
Query: 165 TKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRF 224
H FCKTLTASDTSTHGGFSV RR ++C PPLD Q P QELVAKD+HG E F
Sbjct: 104 -----HPFCKTLTASDTSTHGGFSVLRRHTDECLPPLDMSQNPPWQELVAKDMHGNEXPF 158
Query: 225 RHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLP 281
RHI++GQPR HLLTTGWS+FVS K L GDA++FLR ++GEL +G+RR + N +P
Sbjct: 159 RHIFQGQPRCHLLTTGWSVFVSTKRLAVGDALIFLRKENGELCVGVRRLTRQLNNVP 215
>gi|147819710|emb|CAN74121.1| hypothetical protein VITISV_034897 [Vitis vinifera]
Length = 188
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 101/191 (52%), Positives = 125/191 (65%), Gaps = 15/191 (7%)
Query: 44 SANSSSSS---SLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPI 99
S NSS SS +++ ++Y ELWHACAGPL ++P++ V YFPQGH+EQ+ AS
Sbjct: 3 SLNSSYSSLVGTVNDALYKELWHACAGPLVNVPREQERVYYFPQGHMEQLEASMHQGLDQ 62
Query: 100 EVPNFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEG 159
++P+F+L +I CKVV+V L A E DEVY QV LLP+P+ + L +
Sbjct: 63 KMPSFNLPSKILCKVVNVHLRAEPETDEVYAQVTLLPEPDQSEITSPDPPLPE------- 115
Query: 160 GGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHG 219
P T H FCKTLTASDTSTHGGFSV RR A++C PPLD Q P QELVAKDLHG
Sbjct: 116 ----PQSCTVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSQNPPWQELVAKDLHG 171
Query: 220 VEWRFRHIYRG 230
EW FRHI+RG
Sbjct: 172 NEWHFRHIFRG 182
>gi|379323240|gb|AFD01319.1| auxin response factor 24 [Brassica rapa subsp. pekinensis]
Length = 540
Score = 187 bits (475), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 123/398 (30%), Positives = 182/398 (45%), Gaps = 75/398 (18%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+L CAGPL PK G +V L Q+ P FD+ +I C V + L
Sbjct: 26 QLLKLCAGPLFDTPKVGEKLVTSINDELCQLK----------PIFDIPSKICCNVFSINL 75
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
+++Y +VALLP + + + ++ F K L+AS
Sbjct: 76 KVENNTNDIYAEVALLPDTSDVEIPIPKNENNIQNIN--------------YFTKVLSAS 121
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
DT GGF + +R A +C P LD Q PSQE++AKD+HG +W F+H
Sbjct: 122 DTCKTGGFVLYKRHAMECLPLLDMSQLTPSQEIIAKDIHGHKWSFKHT------------ 169
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVA 299
LRG++GE R+GI R+ +P S +SKQ+ + V++
Sbjct: 170 -------------------LRGENGESRVGISRAAHQERNIPTSSISKQSMHHGVVATAL 210
Query: 300 NAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCNGV 359
N + K MF VFY PR++ F++ + K+V + N IG++F M+FE D E R NG
Sbjct: 211 NTIKNKCMFVVFYKPRSSQ--FLVNFDKFVDRVNNKFSIGSKFSMKFEGKDLNETRYNGT 268
Query: 360 VTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKK 419
+ G+ D + W +S+WR L V+WD ++VSPWEI+ + QSS K
Sbjct: 269 IVGVGDFSTH-WKDSEWRSLKVQWDGTATIPRPDKVSPWEIE-------MLTQSSNISK- 319
Query: 420 LRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQE 457
DY + R V +F + S + QGQE
Sbjct: 320 ---------SDYLKNKRQIDVYEFGSKMWSPTLSQGQE 348
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 26/139 (18%)
Query: 657 CKLFGFSL----TSETPTPSSQSPGK-----------------RSCTKVHKQGSLVGRAI 695
C+LFG L T++ P S K RS TKVH +G ++ R +
Sbjct: 386 CRLFGVDLVNPATTKDPVEPIDSNKKLKISKIFEDEKIDHVQARSHTKVHMEG-VIERTV 444
Query: 696 DLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSK 755
DL +GY+ L+ ELE LF+++G L K W++ + + D+M++GDDPW +FC +
Sbjct: 445 DLTIFDGYSQLIDELERLFDIKGELHMHNK-WKMFFIYDDGDMMILGDDPWTKFCYMAKE 503
Query: 756 IHIYTQEEVEKMTIGTTDD 774
I I +++ V+ IG D+
Sbjct: 504 IFICSKKGVK---IGIADN 519
>gi|224063158|ref|XP_002301019.1| predicted protein [Populus trichocarpa]
gi|222842745|gb|EEE80292.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 99/216 (45%), Positives = 132/216 (61%), Gaps = 3/216 (1%)
Query: 62 WHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDL-QPQIFCKVVDVQLL 120
W ACAG +P + V YFPQGH EQ +SS+A P + N L +P I C++ V L
Sbjct: 1 WRACAGSSVQIPAVNSRVYYFPQGHFEQSSSSTAPHPPFLTNLALSKPSIPCQISAVDFL 60
Query: 121 ANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHM-FCKTLTAS 179
A+ DEV+T++ L+P + NL LE + EG + F K LT S
Sbjct: 61 ADPVTDEVFTRLLLIPL-DNPFSNLPLSFLEPCRSEGEGANDVDDDERKILAFSKILTPS 119
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + GGFSVPR A+ FPPL+Y+ + P Q L D+HGV W FRHIYRG PRRHLLTT
Sbjct: 120 DANNGGGFSVPRFCADSIFPPLNYQAEPPVQTLTVADIHGVSWDFRHIYRGTPRRHLLTT 179
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQ 275
GWS FV+ K L++GD+V+F+R GE+ +G+RR+V+
Sbjct: 180 GWSKFVNNKKLIAGDSVVFMRNLKGEMFIGVRRAVR 215
>gi|242073716|ref|XP_002446794.1| hypothetical protein SORBIDRAFT_06g022810 [Sorghum bicolor]
gi|241937977|gb|EES11122.1| hypothetical protein SORBIDRAFT_06g022810 [Sorghum bicolor]
Length = 695
Score = 187 bits (474), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 120/368 (32%), Positives = 171/368 (46%), Gaps = 43/368 (11%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVD 116
++ LW ACAG + ++P G V YFPQGH E ++ + + P + C+V
Sbjct: 48 VHPRLWQACAGSMRAVPPVGAAVYYFPQGHAEHAGGAAV-------DLRVPPFVPCRVAA 100
Query: 117 VQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKST-------- 168
V+L+A+ + D+VY ++ L+P L A + V +G R
Sbjct: 101 VRLMADPDTDDVYARIRLVP---LRAWEPVADVGDAALVKTDGSSRGGADGDGDGDAGGG 157
Query: 169 ------PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEW 222
P F KTLT SD + GGFSVPR A FP LDY P Q + A+D+HGVEW
Sbjct: 158 QQQQPRPLSFAKTLTPSDANNGGGFSVPRFCALSIFPELDYSFSPPVQFVSARDVHGVEW 217
Query: 223 RFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPD 282
FRHIYR PRR LL G + +++ +F R G G+ + G D
Sbjct: 218 TFRHIYRSTPRRTLLNPGCRLRRAKR--------VFCRRGGGGSNAGVAVA-----GPSD 264
Query: 283 SILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRF 342
+ ++ + A + F V + PRA+ +FV+ + + P C G RF
Sbjct: 265 GKVPAED-----VVEAARLAAAGQPFEVVHYPRASAPEFVVRAAAVKESMQAPWCPGLRF 319
Query: 343 KMRFEMDD-SPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
KM FE +D S G + G+ DP RWP S WR L V WDE + +V PW ++
Sbjct: 320 KMAFETEDLSRISWFMGTIAGVEPADPARWPQSPWRLLQVTWDEPELLRNVNRVCPWRVE 379
Query: 402 RSVSLPPL 409
S+P L
Sbjct: 380 LVSSMPKL 387
>gi|357492607|ref|XP_003616592.1| Auxin response factor [Medicago truncatula]
gi|355517927|gb|AES99550.1| Auxin response factor [Medicago truncatula]
Length = 460
Score = 186 bits (471), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 132/373 (35%), Positives = 184/373 (49%), Gaps = 36/373 (9%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
E+W AGP +PK + V YFP GHLE S + + N +P I C V DV L
Sbjct: 12 EIWQCLAGPSFKIPKLNSQVFYFPLGHLEHACPSPNTEALSLIN-SYRPIIPCVVSDVDL 70
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFC-KTLTA 178
LA+ + DEV+ ++ L P + ++ Q ++ +E GG R +F KTLT
Sbjct: 71 LADLQTDEVFAKLILTP---ITNDSVHEPQEPEVRENEHGGDRL-------VFSGKTLTQ 120
Query: 179 SDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLT 238
SD + G FSVP A+ FPPLD PSQ L KD+H W FRH YRG P+RHL+T
Sbjct: 121 SDANNGGAFSVPSECAKLIFPPLDLTSPMPSQVLPIKDIHNFVWNFRHTYRGSPKRHLIT 180
Query: 239 TGWSIFVSQKNLVSGDAVLFL----RGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
T WS FV K ++ GD+++ + ++ +GIRR LS
Sbjct: 181 TKWSKFVDTKKIIGGDSLVLMKISKDKDKDKIFIGIRRHK----------LSAAAKITEK 230
Query: 295 LSVVANAVSTKSM-FHVFYSPRATH-ADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSP 352
+ A ++ K+M F V Y P A+H +FV+ + K + G R K + D+S
Sbjct: 231 SVMEAAELADKNMTFEVIYYPTASHWCNFVVDAEAVKKAMQINWQSGMRVKHCLKTDESS 290
Query: 353 ERRC--NGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLS 410
+R G V+ ++ DP P WR L V WDE S + QVSPW+I+ P L
Sbjct: 291 KRSSIFQGTVSALS--DPSHHP---WRMLQVNWDESEVSQNPSQVSPWQIELISHTPALP 345
Query: 411 IQSSPRMKKLRTG 423
+Q P+ KKLR
Sbjct: 346 LQFPPQ-KKLRIA 357
>gi|15810291|gb|AAL07033.1| auxin response factor ARF17 [Arabidopsis thaliana]
Length = 585
Score = 185 bits (470), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 115/371 (30%), Positives = 171/371 (46%), Gaps = 43/371 (11%)
Query: 61 LWHACAGPLTSLPKKGNVVVYFPQGHLEQVASS-SAFPPIEVPNFDLQPQIFCKVVDVQL 119
+W ACAG +P + V YFPQGH+E S P P + C + +QL
Sbjct: 20 IWRACAGASVQIPVLHSRVYYFPQGHVEHCCPLLSTLPSSTSP-------VPCIITSIQL 72
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
LA+ DEV+ + L P + + Q D + + T F K LT S
Sbjct: 73 LADPVTDEVFAHLILQPMTQQQFTPTNYSQFGRFDGDVDDNNKVTT------FAKILTPS 126
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + GGFSVPR A+ FP L+++ P Q+L D+HG W FRHIYRG PRRHLLTT
Sbjct: 127 DANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGTPRRHLLTT 186
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRS-------------------------- 273
GWS FV+ K L++GD+V+F+R E+ +G+RR+
Sbjct: 187 GWSKFVNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGSSYYGGDEYNGYYSQSSV 246
Query: 274 VQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSM---FHVFYSPRATHADFVIPYQKYVK 330
+ +G P + + V +A++ S F V + P A ++FV+ +
Sbjct: 247 AKEDDGSPKKTFRRSGNGKLTAEAVTDAINRASQGLPFEVVFYPAAGWSEFVVRAEDVES 306
Query: 331 IIMNPICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSD 390
+ GTR KM E +DS + T + W S W+ L + WDE
Sbjct: 307 SMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGPWRGSPWKQLQITWDEPEILQ 366
Query: 391 HQEQVSPWEID 401
+ ++V+PW+++
Sbjct: 367 NVKRVNPWQVE 377
>gi|297839643|ref|XP_002887703.1| hypothetical protein ARALYDRAFT_895674 [Arabidopsis lyrata subsp.
lyrata]
gi|297333544|gb|EFH63962.1| hypothetical protein ARALYDRAFT_895674 [Arabidopsis lyrata subsp.
lyrata]
Length = 572
Score = 184 bits (467), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 130/413 (31%), Positives = 185/413 (44%), Gaps = 51/413 (12%)
Query: 61 LWHACAGPLTSLPKKGNVVVYFPQGHLEQVAS-SSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+W ACAG +P + V YFPQGH+E S P P + C + +QL
Sbjct: 20 IWRACAGASVQIPLLYSRVYYFPQGHVEHCCPLISTLPSSTSP-------VPCLITSIQL 72
Query: 120 LANKENDEVYTQVALLP--QPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
LA+ DEV+ + L P Q + N D VD+ K T F K LT
Sbjct: 73 LADPITDEVFAHLVLQPVTQEQFTPTNYSRFGRYDGDVDDN------NKVT--TFAKILT 124
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
SD + GGFSVPR A+ FPPLD++ P Q+L D+HG W FRHIYRG PRRHLL
Sbjct: 125 PSDANNGGGFSVPRFCADSVFPPLDFQIDPPVQKLYITDIHGAVWDFRHIYRGTPRRHLL 184
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRS------------------------ 273
TTGWS FV+ K L++GD+V+F++ E+ +G+RR+
Sbjct: 185 TTGWSKFVNSKKLIAGDSVVFMKKAADEMFMGVRRTPISSSGGGSSYYGGDEYNGYYSQS 244
Query: 274 --VQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSM---FHVFYSPRATHADFVIPYQKY 328
+ +G + V A++ + F V Y P A ++FV+ +
Sbjct: 245 SVAKEDDGSAKKTFRRSGKGKLTAEAVTEAINRAAKGLPFEVAYYPTAGWSEFVVRAEDV 304
Query: 329 VKIIMNPICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIG 388
+ GTR KM E +DS + T + W S W+ L + WDE
Sbjct: 305 ESSMSVFWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGPWRGSPWKQLQITWDEPEI 364
Query: 389 SDHQEQVSPWEIDRSVSLPPLSIQSSP--RMKKLRTG--LQAPPPDYPVSARG 437
+ ++V+PW+++ + L P R+K + G L D P S RG
Sbjct: 365 LQNVKRVNPWQVEIVANATQLHATFPPAKRLKYPQPGGFLSGDDGDIPYSQRG 417
>gi|12323297|gb|AAG51629.1|AC012193_11 putative auxin response factor; 79762-82020 [Arabidopsis thaliana]
Length = 596
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 171/371 (46%), Gaps = 43/371 (11%)
Query: 61 LWHACAGPLTSLPKKGNVVVYFPQGHLEQVASS-SAFPPIEVPNFDLQPQIFCKVVDVQL 119
+W ACAG +P + V YFPQGH+E S P P + C + +QL
Sbjct: 20 IWRACAGASVQIPVLHSRVYYFPQGHVEHCCPLLSTLPSSTSP-------VPCIITSIQL 72
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
LA+ DEV+ + L P + + + D + + T F K LT S
Sbjct: 73 LADPVTDEVFAHLILQPMTQQQFTPTNYSRFGRFDGDVDDNNKVTT------FAKILTPS 126
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + GGFSVPR A+ FP L+++ P Q+L D+HG W FRHIYRG PRRHLLTT
Sbjct: 127 DANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGTPRRHLLTT 186
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRS-------------------------- 273
GWS FV+ K L++GD+V+F+R E+ +G+RR+
Sbjct: 187 GWSKFVNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGSSYYGGDEYNGYYSQSSV 246
Query: 274 VQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSM---FHVFYSPRATHADFVIPYQKYVK 330
+ +G P + + V +A++ S F V + P A ++FV+ +
Sbjct: 247 AKEDDGSPKKTFRRSGNGKLTAEAVTDAINRASQGLPFEVVFYPAAGWSEFVVRAEDVES 306
Query: 331 IIMNPICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSD 390
+ GTR KM E +DS + T + W S W+ L + WDE
Sbjct: 307 SMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGPWRGSPWKQLQITWDEPEILQ 366
Query: 391 HQEQVSPWEID 401
+ ++V+PW+++
Sbjct: 367 NVKRVNPWQVE 377
>gi|18411720|ref|NP_565161.1| auxin response factor 17 [Arabidopsis thaliana]
gi|46576532|sp|Q84WU6.1|ARFQ_ARATH RecName: Full=Auxin response factor 17
gi|27754249|gb|AAO22578.1| auxin response factor ARF17 [Arabidopsis thaliana]
gi|332197913|gb|AEE36034.1| auxin response factor 17 [Arabidopsis thaliana]
Length = 585
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 114/371 (30%), Positives = 171/371 (46%), Gaps = 43/371 (11%)
Query: 61 LWHACAGPLTSLPKKGNVVVYFPQGHLEQVASS-SAFPPIEVPNFDLQPQIFCKVVDVQL 119
+W ACAG +P + V YFPQGH+E S P P + C + +QL
Sbjct: 20 IWRACAGASVQIPVLHSRVYYFPQGHVEHCCPLLSTLPSSTSP-------VPCIITSIQL 72
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
LA+ DEV+ + L P + + + D + + T F K LT S
Sbjct: 73 LADPVTDEVFAHLILQPMTQQQFTPTNYSRFGRFDGDVDDNNKVTT------FAKILTPS 126
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + GGFSVPR A+ FP L+++ P Q+L D+HG W FRHIYRG PRRHLLTT
Sbjct: 127 DANNGGGFSVPRFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGTPRRHLLTT 186
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRS-------------------------- 273
GWS FV+ K L++GD+V+F+R E+ +G+RR+
Sbjct: 187 GWSKFVNSKKLIAGDSVVFMRKSADEMFIGVRRTPISSSDGGSSYYGGDEYNGYYSQSSV 246
Query: 274 VQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSM---FHVFYSPRATHADFVIPYQKYVK 330
+ +G P + + V +A++ S F V + P A ++FV+ +
Sbjct: 247 AKEDDGSPKKTFRRSGNGKLTAEAVTDAINRASQGLPFEVVFYPAAGWSEFVVRAEDVES 306
Query: 331 IIMNPICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSD 390
+ GTR KM E +DS + T + W S W+ L + WDE
Sbjct: 307 SMSMYWTPGTRVKMAMETEDSSRITWFQGIVSSTYQETGPWRGSPWKQLQITWDEPEILQ 366
Query: 391 HQEQVSPWEID 401
+ ++V+PW+++
Sbjct: 367 NVKRVNPWQVE 377
>gi|224103217|ref|XP_002334078.1| predicted protein [Populus trichocarpa]
gi|222869514|gb|EEF06645.1| predicted protein [Populus trichocarpa]
Length = 185
Score = 183 bits (464), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 98/192 (51%), Positives = 126/192 (65%), Gaps = 12/192 (6%)
Query: 41 SSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PI 99
SS S N + + ELWHACAGPL SLP G+ VVYF QGH EQVA+S+
Sbjct: 4 SSASFNPQTQEGEKRVLNSELWHACAGPLVSLPAVGSRVVYFAQGHSEQVAASTNKEVDA 63
Query: 100 EVPNF-DLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEE 158
+PN+ L PQ+ C++ +V + A+ E DEVY Q+ L P L ++ +D + +
Sbjct: 64 RIPNYPSLPPQLICQLHNVTMHADVETDEVYAQLTLQP--------LSPQEQKDAYLPAD 115
Query: 159 GGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLH 218
G +P+K + FCKTLTASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+A+DLH
Sbjct: 116 LG--TPSKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLH 173
Query: 219 GVEWRFRHIYRG 230
EW+FRHI+RG
Sbjct: 174 DNEWKFRHIFRG 185
>gi|301069369|ref|NP_001170537.2| auxin response factor 21 [Zea mays]
gi|295844316|gb|ADG43155.1| auxin response factor 21 [Zea mays]
Length = 698
Score = 181 bits (460), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/217 (46%), Positives = 130/217 (59%), Gaps = 20/217 (9%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLE--QVASSSAFPPIEVPNFDLQPQIFCKVVDV 117
+LWHACAG + +P + V YFPQGH E Q + + P VP + C+V V
Sbjct: 24 QLWHACAGGMVQMPPVHSRVYYFPQGHAEHAQGHAHADLPAGRVPAL-----VLCRVDAV 78
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ LA+ + DEV +V L P E + +A G R + P F KTLT
Sbjct: 79 RFLADPDTDEVLARVRLAPVRPNEPDHADAA---------APGAR---EDKPASFAKTLT 126
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
SD + GGFSVPR AE FP LDY P Q ++AKD+HGV W+FRHIYRG PRRHLL
Sbjct: 127 QSDANNGGGFSVPRYCAETIFPRLDYSADPPVQTVLAKDVHGVVWKFRHIYRGTPRRHLL 186
Query: 238 TTGWSIFVSQKNLVSGDAVLFLR-GKDGELRLGIRRS 273
TTGWS FV+QK LV+GD+++F+R G G+L +GIRR+
Sbjct: 187 TTGWSAFVNQKRLVAGDSIVFMRTGGTGDLCVGIRRA 223
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/138 (36%), Positives = 64/138 (46%), Gaps = 13/138 (9%)
Query: 337 CIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQV 395
C G RFKM FE +DS G V + DP RWPNS WR L V WDE + ++V
Sbjct: 317 CAGMRFKMAFETEDSSRISWFMGTVAAVQVADPIRWPNSPWRLLQVAWDEPDLLQNVKRV 376
Query: 396 SPWEIDRSVSLPP---LSIQSSPRMKKL-----RTGLQAPPPDY---PVSARGGGVLD-F 443
SPW ++ S P L+ S P KKL G Q P P + P+ RG G + F
Sbjct: 377 SPWLVELVSSTPAIHHLTPFSPPSRKKLCIPLYPEGHQLPAPMFHGSPLVGRGVGPMRYF 436
Query: 444 EESVRSSKVLQGQENVGF 461
+ +QG + F
Sbjct: 437 PDGGTPPAGIQGARHAQF 454
>gi|242077784|ref|XP_002448828.1| hypothetical protein SORBIDRAFT_06g033970 [Sorghum bicolor]
gi|241940011|gb|EES13156.1| hypothetical protein SORBIDRAFT_06g033970 [Sorghum bicolor]
Length = 518
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 129/381 (33%), Positives = 184/381 (48%), Gaps = 55/381 (14%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIF-CKVVDVQ 118
++W ACA PL+ LP G V YFP GH EQ P +P P +F C V ++
Sbjct: 17 DVWLACAVPLSRLPTVGAEVYYFPHGHAEQC-------PAHLPAPIPAPHLFPCIVTNLT 69
Query: 119 LLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVD-----EEGGGRSPTKSTPH--- 170
L A+ + +EV+ +++L P P + A +G D +E SP P
Sbjct: 70 LGADDKTNEVFAKISLSPGPH----HAPAAASSLVGPDPTTTTKESESDSPPHPQPQELS 125
Query: 171 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRG 230
F K LT SD + GGFSVPR A+ FP LD+ P Q LV +D G W+FRHIYRG
Sbjct: 126 YFTKELTQSDANNGGGFSVPRYCADHIFPTLDFDADPPVQNLVMRDTRGNPWQFRHIYRG 185
Query: 231 QPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGL---------- 280
PRRHLLTTGWS FV+ K LV+GD V+F+R +G+L +G+RR+ PR L
Sbjct: 186 TPRRHLLTTGWSRFVNAKLLVAGDIVVFMRRTNGDLIVGLRRT--PRYPLVFPGADANAN 243
Query: 281 ------PDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMN 334
P ++ P + A + F V Y PR +FV+P + + +
Sbjct: 244 ANQDQQPPPRNARARVPPQDVMEAARLAAEGRPFTVTYFPRQAAGEFVVPRDEVERALAT 303
Query: 335 PICIGTRFKMR-FEMDDSPERR---CNGVVTGITDLDPYRWPNSKWRCLMVRWDEC--IG 388
GT +M+ E +D+ RR +G V + + WR L + WD+ +
Sbjct: 304 RWEPGTEVRMQVMEAEDT--RRTVWADGHVKALH--------QNIWRALEIDWDDSSPLS 353
Query: 389 SDHQEQVSPWEIDRSVSLPPL 409
V+ W++ + V+ PPL
Sbjct: 354 LKLSRFVNAWQV-QLVAYPPL 373
>gi|293333131|ref|NP_001169598.1| uncharacterized protein LOC100383479 [Zea mays]
gi|224030297|gb|ACN34224.1| unknown [Zea mays]
gi|295844284|gb|ADG43139.1| auxin response factor 5 [Zea mays]
gi|407232712|gb|AFT82698.1| ARF5 transcription factor, partial [Zea mays subsp. mays]
gi|414586223|tpg|DAA36794.1| TPA: auxin response factor 5 [Zea mays]
Length = 513
Score = 178 bits (452), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 124/370 (33%), Positives = 176/370 (47%), Gaps = 48/370 (12%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIF-CKVVDVQ 118
++W ACA PL+ LP G V YFP GH EQ P +P P +F C V V
Sbjct: 21 DVWLACAVPLSRLPAVGAEVYYFPHGHAEQC-------PAHLPAPLPAPHLFPCTVAGVS 73
Query: 119 LLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTP----HMFCK 174
L A+ E +EV+ +++L P P G + PT P F K
Sbjct: 74 LGADDETNEVFAKISLSPGPH-RGPAAACRT-------------DPTSDCPPQELSYFTK 119
Query: 175 TLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
LT SD + GGFSVPR A+ FP LD+ P Q+L +D G W+FRHIYRG PRR
Sbjct: 120 ELTQSDANNGGGFSVPRYCADHIFPTLDFDANPPVQKLFMRDTRGNPWQFRHIYRGTPRR 179
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRS-----VQPRNG--------LP 281
HLLTTGWS FV+ K LV+GD V+F+R +G+L +G+RR+ V PR G P
Sbjct: 180 HLLTTGWSRFVNAKLLVAGDIVVFMRRHNGDLIVGLRRTPRYPLVFPRVGSGAGVDPDQP 239
Query: 282 DSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTR 341
++ P + A + F V Y PR +F++P + ++ G +
Sbjct: 240 PPRNARARVPPQDVIEAARLAAEGRSFAVTYFPRQAAGEFIVPRDEVEGVLATRWEPGAQ 299
Query: 342 FKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDEC--IGSDHQEQVSPWE 399
+M+ M+ RR + L + WR L + WD+ + + V+ W+
Sbjct: 300 VRMQV-MEAEDTRRTVWADGHVKSLH-----QNIWRALEIDWDDSSPLSPNLSRFVNAWQ 353
Query: 400 IDRSVSLPPL 409
++ V+ PPL
Sbjct: 354 VEL-VTHPPL 362
>gi|124359419|gb|ABN05872.1| Transcriptional factor B3 [Medicago truncatula]
Length = 207
Score = 175 bits (444), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 94/211 (44%), Positives = 125/211 (59%), Gaps = 14/211 (6%)
Query: 69 LTSLPKKGNVVVYFPQGHLEQVASSSAFPPI-EVPNFDLQPQIFCKVVDVQLLANKENDE 127
+ +P+ + V YFPQGH E F ++P+F I C+V D++ +AN E DE
Sbjct: 1 MVQMPEVNSQVFYFPQGHAEHACEPVNFSAYSKIPSF-----IPCRVEDIRYMANHETDE 55
Query: 128 VYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASDTSTHGGF 187
VY ++ L+P +N+ ++ GV G S TK F KTLT SD + GGF
Sbjct: 56 VYAKLRLVP------MNINQVSFDNDGV--AGINVSETKDKHQSFAKTLTQSDANNGGGF 107
Query: 188 SVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQ 247
S PR AE FP +DY P Q + KD+HG +W FRH+YRG P+RHLLTTGWS FVS
Sbjct: 108 SCPRYCAEMIFPRMDYSGNPPFQGIYPKDVHGEKWHFRHVYRGTPKRHLLTTGWSPFVSD 167
Query: 248 KNLVSGDAVLFLRGKDGELRLGIRRSVQPRN 278
K L SGD+V+FLR ++GELR+GI R + N
Sbjct: 168 KKLASGDSVVFLRSENGELRVGIWREKRRNN 198
>gi|379323230|gb|AFD01314.1| auxin response factor 17-2 [Brassica rapa subsp. pekinensis]
Length = 546
Score = 174 bits (442), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 119/367 (32%), Positives = 175/367 (47%), Gaps = 50/367 (13%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
++W ACAG +P + V Y+PQGH+E SS+ P I C V + L
Sbjct: 17 KIWRACAGASVKIPALFSRVYYYPQGHVEHCCPSSS-------AVTASP-IACVVSSIDL 68
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
LA+ DEV+ + L P + + + +E+ + T F K LTAS
Sbjct: 69 LADPITDEVFAHLTLHPAAAQDQFQFPPQSRFE---EEDESEKVVT------FAKVLTAS 119
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + GGFSVPR A+ FPPLD++ P Q+L D+HG W FRHIYRG PRRHLLTT
Sbjct: 120 DANNGGGFSVPRYCADSVFPPLDFQADPPVQKLFITDVHGGVWDFRHIYRGTPRRHLLTT 179
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRS-VQPRNG---------LPDSI--LSK 287
GWS FV+ K L+ GD+V+F+R E+ +G+RR+ + ++G P + K
Sbjct: 180 GWSKFVNSKKLICGDSVVFMRKSVHEMFIGVRRAPISNKSGGSSYYGDEYFPGGYYGVKK 239
Query: 288 QNSYPNVLSV---------VANAVSTKSM---FHVFYSPRATHADFVIPYQKYVKIIMNP 335
++ V V+ A+ S F V Y P A ++FV+ +
Sbjct: 240 EDGGEKFRRVGMGKLTAEAVSEAIGKASRGLPFEVVYYPTAGWSEFVVRAEDVEASTNVY 299
Query: 336 ICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQ 394
GTR KM E +DS G+V+ W+ L + WDE + ++
Sbjct: 300 WTPGTRVKMAMETEDSSRITWFQGIVSATF--------QETWKQLQITWDEPEILQNLKR 351
Query: 395 VSPWEID 401
V+PW+++
Sbjct: 352 VNPWQVE 358
>gi|15218584|ref|NP_175062.1| auxin response factor 23 [Arabidopsis thaliana]
gi|46576660|sp|Q9LP07.2|ARFW_ARATH RecName: Full=Putative auxin response factor 23
gi|332193887|gb|AEE32008.1| auxin response factor 23 [Arabidopsis thaliana]
Length = 222
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/218 (44%), Positives = 129/218 (59%), Gaps = 18/218 (8%)
Query: 55 SSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEV-PNFDLQPQIFCK 113
S +Y +LW CAGPL +PK G V YFPQGH+E V +S+ E+ PN DL ++ C+
Sbjct: 22 SYMYEQLWKLCAGPLCDIPKLGEKVYYFPQGHIELVEASTREELNELQPNCDLPSKLQCR 81
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFC 173
V+ + L +DE Y ++ L+P + Q+ + + E R S F
Sbjct: 82 VIAIHLKVENNSDETYVEITLMP---------DTTQVV-IPTENENQFRPIVNS----FT 127
Query: 174 KTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPR 233
K LTASDTS G FSVP + A +C PPLD Q P+QEL+A DLHG +WRF+H YR PR
Sbjct: 128 KVLTASDTSAQGEFSVPCKHAIECLPPLDMSQPIPAQELIAIDLHGNQWRFKHSYR-VPR 186
Query: 234 RHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIR 271
TTGW+ F + K LV GD ++F RG+ GELR+GIR
Sbjct: 187 GD--TTGWNAFTTSKKLVVGDVIVFARGETGELRVGIR 222
>gi|356551606|ref|XP_003544165.1| PREDICTED: auxin response factor 17-like [Glycine max]
Length = 545
Score = 174 bits (441), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 135/380 (35%), Positives = 183/380 (48%), Gaps = 43/380 (11%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
++W ACAG +PK + V YFPQGHLE + S P+ P + C V +
Sbjct: 12 KIWRACAGAAVQIPKLHSRVYYFPQGHLEHASPSHYLNPL----LRSLPFVPCHVSSLDF 67
Query: 120 LANKENDEVYTQVALLP--QPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
LA+ +DEV+ + L P Q EA+ E+ D E G S F K LT
Sbjct: 68 LADPFSDEVFAKFLLTPLSQQPFPNDTTEARNEEE--KDRENGVVS--------FSKILT 117
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
SD + GGFSVPR A+ FPPLD+ PS VA V RHIYRG PRRHL
Sbjct: 118 PSDANNGGGFSVPRYCADSWFPPLDFXXXXPSSP-VATSRRRVA--LRHIYRGTPRRHLF 174
Query: 238 TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIR---------RSVQP----RNGLPDSI 284
TTGWS FV+ K LV+GD V+F++ DG + +GIR + QP R G S
Sbjct: 175 TTGWSKFVNHKKLVAGDTVVFVKDSDGRVSVGIRRAARFAAAIETPQPPPAEREGFSRSA 234
Query: 285 LSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKM 344
+ + ++ A + + + F V Y PR ADFV+ + + + G R K+
Sbjct: 235 TGRVTA--EAVAAAAESAARNAPFEVVYYPRTGFADFVVSAEVVEESMKCAWVGGMRVKI 292
Query: 345 RFEMDDSPERR-CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRS 403
E +DS G V+ + N WR L V WDE + ++VSPW+++
Sbjct: 293 AMETEDSSRMTWFQGTVSSACASE-----NGPWRMLQVNWDEPEVLQNAKRVSPWQVEL- 346
Query: 404 VSLP-PLSIQSSPRMKKLRT 422
VSLP L SP K+LR+
Sbjct: 347 VSLPFALHTVYSPN-KRLRS 365
>gi|75233030|sp|Q7XSS9.2|ARFM_ORYSJ RecName: Full=Auxin response factor 13
gi|38345524|emb|CAE01808.2| OSJNBa0039K24.27 [Oryza sativa Japonica Group]
gi|215766448|dbj|BAG98756.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 529
Score = 171 bits (434), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 116/360 (32%), Positives = 163/360 (45%), Gaps = 31/360 (8%)
Query: 61 LWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQLL 120
+W ACA PL+ +P G V YFP+GH EQ + P+ P C + V L
Sbjct: 28 VWLACAAPLSRIPVVGTQVSYFPEGHAEQCPA-----PLPDPLPSAHRFFLCTITAVDLS 82
Query: 121 ANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASD 180
A+ E Y ++LLP L +A + K LT SD
Sbjct: 83 ADTTTGEPYATISLLP------LRHDAPAPAPAPAPAAAELAEAESQEFRYYAKQLTQSD 136
Query: 181 TSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTG 240
+ GGFSVPR A+ FP L+ P Q L DL G W FRHIYRG PRRHLLTTG
Sbjct: 137 ANNGGGFSVPRLCADHIFPALNLDDDPPVQSLTMGDLQGDSWEFRHIYRGTPRRHLLTTG 196
Query: 241 WSIFVSQKNLVSGDAVLFLR----GKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLS 296
WS FV+ K LV+GD V+F+ + +L +G+RR+ R + ++ P +
Sbjct: 197 WSKFVNAKQLVAGDTVVFMWCGAPAPERKLLVGVRRAA--RYSGESACNARGRVQPQEVM 254
Query: 297 VVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERR- 355
+ ++ F V Y PR +FV+P + K + P G + + + M+ RR
Sbjct: 255 EAVRLAAEQAAFRVTYYPRHGAGEFVVPRVEVDKGLTTPWRCGMQVRAQV-MEAEDTRRL 313
Query: 356 --CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQ--VSPWEIDRSVSLPPLSI 411
NG +T + WR L V WD S + V+PW++ + V PPL +
Sbjct: 314 AWLNGTLTNLRH-------QQIWRTLEVEWDASAASSSMKNRFVNPWQV-QPVDFPPLPM 365
>gi|116311996|emb|CAJ86354.1| H0814G11.21 [Oryza sativa Indica Group]
gi|125550331|gb|EAY96153.1| hypothetical protein OsI_18032 [Oryza sativa Indica Group]
Length = 525
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 116/360 (32%), Positives = 163/360 (45%), Gaps = 35/360 (9%)
Query: 61 LWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQLL 120
+W ACA PL+ +P G V YFP+GH EQ + P+ P C + V L
Sbjct: 28 VWLACAAPLSRIPVVGTQVSYFPEGHAEQCPA-----PLPDPLPSAHRFFLCTITAVDLS 82
Query: 121 ANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASD 180
A+ E Y ++LLP A +E + K LT SD
Sbjct: 83 ADTTTGEPYATISLLPLRHDAPAPAPAAAELAEAESQEF----------RYYAKQLTQSD 132
Query: 181 TSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTG 240
+ GGFSVPR A+ FP L+ P Q L DL G W FRHIYRG PRRHLLTTG
Sbjct: 133 ANNGGGFSVPRLCADHIFPALNLDDDPPVQSLTMGDLQGDSWEFRHIYRGTPRRHLLTTG 192
Query: 241 WSIFVSQKNLVSGDAVLFLR----GKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLS 296
WS FV+ K LV+GD V+F+ + +L +G+RR+ R + ++ P +
Sbjct: 193 WSKFVNAKQLVAGDTVVFMWCGAPAPERKLLVGVRRAA--RYSGESACNARGRVQPQEVM 250
Query: 297 VVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERR- 355
+ ++ F V Y PR +FV+P + K + P G + + + M+ RR
Sbjct: 251 EAVRLAAEQAAFRVTYYPRHGAGEFVVPRVEVDKGLTTPWRCGMQVRAQV-MEAEDTRRL 309
Query: 356 --CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQ--VSPWEIDRSVSLPPLSI 411
NG +T + WR L V WD S + V+PW++ + V PPL +
Sbjct: 310 AWLNGTLTNLRH-------QQIWRTLEVEWDASAASSSMKNRFVNPWQV-QPVDFPPLPM 361
>gi|297746266|emb|CBI16322.3| unnamed protein product [Vitis vinifera]
Length = 546
Score = 168 bits (425), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 106/289 (36%), Positives = 151/289 (52%), Gaps = 18/289 (6%)
Query: 210 QELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLG 269
+ ++AKD+HG W+FRHIYRG PRRHLLTTGWS FV+QK LV+GD+++FLR ++G+L +G
Sbjct: 74 ETVIAKDVHGEIWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFLRAENGDLCVG 133
Query: 270 IRRSVQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYV 329
IRR+ + G + + P + A + F V Y PRA+ +F +
Sbjct: 134 IRRAKRGIAGSGGGLRGGRRVRPESVVEAATLAANGQPFEVVYYPRASTPEFCVKASGVR 193
Query: 330 KIIMNPICIGTRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIG 388
+ C G RFKM FE +DS G ++ + DP RWPNS WR L V WDE
Sbjct: 194 SAVRIQWCSGMRFKMPFETEDSSRISWFMGTISSVQVADPIRWPNSPWRLLQVTWDEPDL 253
Query: 389 SDHQEQVSPWEIDRSVSLPPLSIQS-SPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESV 447
+ ++VSPW ++ ++P + + SP KKLR PD+P + F S
Sbjct: 254 LQNVKRVSPWLVELVSNMPIIHLSPFSPPRKKLRIPQH---PDFPFDGQ------FPMSS 304
Query: 448 RSSKVLQGQENVGFVSPLYGCDTVNHPLGFEMRAPAHQSLALNGIRKDN 496
SS L G SPL C N P G + A ++L+ + +N
Sbjct: 305 FSSNPL------GSSSPLC-CLPDNTPAGIQGARHAQYGISLSDLHLNN 346
Score = 53.9 bits (128), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 6/70 (8%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPI-EVPNFDLQPQIFCKVVDVQ 118
+LWHACAG + +P + V YFPQGH E ++ F +P + C+V V+
Sbjct: 11 QLWHACAGGMVQMPLVSSKVFYFPQGHAEHAHTNVDFAAAPRIPAL-----VLCRVAAVK 65
Query: 119 LLANKENDEV 128
+A+ E DE
Sbjct: 66 FMADPETDET 75
>gi|6573757|gb|AAF17677.1|AC009243_4 F28K19.6 [Arabidopsis thaliana]
Length = 652
Score = 167 bits (422), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 110/367 (29%), Positives = 166/367 (45%), Gaps = 50/367 (13%)
Query: 72 LPKKGNVVVYFPQGHLEQVASS-SAFPPIEVPNFDLQPQIFCKVVDVQLLANKENDEVYT 130
+P + V YFPQGH+E S P P + C + +QLLA+ DEV+
Sbjct: 28 IPVLHSRVYYFPQGHVEHCCPLLSTLPSSTSP-------VPCIITSIQLLADPVTDEVFA 80
Query: 131 QVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVP 190
+ L P + + + D + + T F K LT SD + GGFSVP
Sbjct: 81 HLILQPMTQQQFTPTNYSRFGRFDGDVDDNNKVTT------FAKILTPSDANNGGGFSVP 134
Query: 191 RRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNL 250
R A+ FP L+++ P Q+L D+HG W FRHIYRG PRRHLLTTGWS FV+ K L
Sbjct: 135 RFCADSVFPLLNFQIDPPVQKLYVTDIHGAVWDFRHIYRGTPRRHLLTTGWSKFVNSKKL 194
Query: 251 VSGDAVLFLRGKDGELRLGIRRS--------------------------VQPRNGLPDSI 284
++GD+V+F+R E+ +G+RR+ + +G P
Sbjct: 195 IAGDSVVFMRKSADEMFIGVRRTPISSSDGGSSYYGGDEYNGYYSQSSVAKEDDGSPKKT 254
Query: 285 LSKQNSYPNVLSVVANAVSTKSM---FHVFYSPRATHADFVIPYQKYVKIIMNPICIGTR 341
+ + V +A++ S F V + P A ++FV+ + + GTR
Sbjct: 255 FRRSGNGKLTAEAVTDAINRASQGLPFEVVFYPAAGWSEFVVRAEDVESSMSMYWTPGTR 314
Query: 342 FKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCL-------MVRWDECIGSDHQEQ 394
KM E +DS + T + W S W+ L M+ WDE + ++
Sbjct: 315 VKMAMETEDSSRITWFQGIVSSTYQETGPWRGSPWKQLQVYDVFEMITWDEPEILQNVKR 374
Query: 395 VSPWEID 401
V+PW+++
Sbjct: 375 VNPWQVE 381
>gi|357486975|ref|XP_003613775.1| Auxin response factor [Medicago truncatula]
gi|355515110|gb|AES96733.1| Auxin response factor [Medicago truncatula]
Length = 410
Score = 165 bits (418), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 122/364 (33%), Positives = 174/364 (47%), Gaps = 44/364 (12%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIF-CKVVDVQ 118
++W CAG +PK + V YFP GHLE V+ S P + D Q C V V
Sbjct: 12 KIWQCCAGAAVKIPKLNSHVYYFPLGHLEHVSPSPN--PSTLSLLDRSRQFIPCTVSTVN 69
Query: 119 LLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTA 178
LLA+ DEV+ ++ L P N + ++ D+ G + + KTLT
Sbjct: 70 LLADPVTDEVFVKLLLTPGTN----NCVHEPPPEVREDQHDGVKVVSSG------KTLTP 119
Query: 179 SDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLT 238
SD + G FSVP A+ FPPLD + ++PSQ+L D+HG EW+ RH+YRG P RHL+T
Sbjct: 120 SDANNGGAFSVPSECAKLIFPPLDLQAEKPSQKLSVTDIHGKEWKLRHVYRGTPLRHLIT 179
Query: 239 TGWSIFVSQKNLVSGDAVLFL----RGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
T WS FV +K L+ GD+++F+ R + +GI R + G I K +
Sbjct: 180 TNWSEFVDEKKLIGGDSLVFMKKSTRTGTETISVGIHRQ---KFGAATKIAEKSVTE--- 233
Query: 295 LSVVANAVSTKSM-FHVFYSPRATH-ADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSP 352
A ++ K+M F V Y P A DFV+ + + N G R K + D+S
Sbjct: 234 ----AVELAEKNMAFDVVYYPTAEGWCDFVVNAKVVEDAMKNKWNSGLRIKHSLKKDNS- 288
Query: 353 ERRCNGVVTGITDLDPYRWPNSKWRCLMVRW--DECIGSDHQEQVSPWEIDRSVSLPPLS 410
+RC+ I+ L PN WR L VR D + +D I+R S+P +
Sbjct: 289 SKRCSNFEGTISALSA---PNRPWRMLEVRTAKDSALHND---------IERDSSIPKIK 336
Query: 411 IQSS 414
SS
Sbjct: 337 FHSS 340
>gi|304307977|gb|ADL70301.1| auxin response factor 4 [Arabidopsis thaliana]
Length = 229
Score = 165 bits (418), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 107/238 (44%), Positives = 136/238 (57%), Gaps = 14/238 (5%)
Query: 374 SKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTG-LQAPPPDYP 432
SKWRCL+VRWDE SDHQE+VSPWEID SVSLP LSIQSSPR K+ G L PP P
Sbjct: 1 SKWRCLLVRWDESFVSDHQERVSPWEIDPSVSLPHLSIQSSPRPKRPWAGLLDTTPPGNP 60
Query: 433 VSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHP-LGFEMRAPAHQSLALNG 491
++ R GG LDFEESVR SKVLQGQEN+G SP G D +N L F M++ A+ L +
Sbjct: 61 ITKR-GGFLDFEESVRPSKVLQGQENIGSASPSQGFDVMNRRILDFAMQSHANPVLVSSR 119
Query: 492 IRKDNINELVRA--LPTSYTGFVESNRFPKVLQGQEICPLRSLTGKVDLNLGTWGKPNFG 549
+ KD E V A + + +G ++ +RFP+VLQGQEIC L+S + P
Sbjct: 120 V-KDRFGEFVDATGVNPACSGVMDLDRFPRVLQGQEICSLKSFPQFAGFSPAAAPNP--- 175
Query: 550 CNSMNMYQASKPNIYPPPSESLSNMFFPYGDMPKTVQHHTMPP-YASNLQRENVKLNS 606
YQA+K + YP + + PY + + PP A N E K ++
Sbjct: 176 ----FAYQANKSSYYPLALHGIRSTHVPYQNPYNAGNQSSGPPSRAINFGEETRKFDA 229
>gi|242050114|ref|XP_002462801.1| hypothetical protein SORBIDRAFT_02g032210 [Sorghum bicolor]
gi|241926178|gb|EER99322.1| hypothetical protein SORBIDRAFT_02g032210 [Sorghum bicolor]
Length = 622
Score = 165 bits (417), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 110/367 (29%), Positives = 164/367 (44%), Gaps = 65/367 (17%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQ---PQIFCK 113
++ +LW ACAG + ++P G YFPQGH EQ ++ DL+ P + C+
Sbjct: 32 VHPQLWQACAGSMCAVPPVGAADYYFPQGHAEQAGAA----------VDLRVVPPFVACR 81
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHM-- 171
V V+L+A + D++Y ++ L+P E + L G G +
Sbjct: 82 VAAVRLMAEPDTDDIYAKIRLVPLRPWEPVTDVGDALLGEGSRGGDGDGQQRRRRRPRPL 141
Query: 172 -FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRG 230
F KTLT SD W FRH+YRG
Sbjct: 142 SFAKTLTQSD-----------------------------------------WTFRHVYRG 160
Query: 231 QPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQ-------PRNGLPDS 283
P RHL+T GWS FV K L+ GD+V+F+R +DG++ +G+RR+ + R+G +
Sbjct: 161 NPPRHLITAGWSNFVHNKKLLPGDSVVFVREEDGKVHIGLRRAKRVFCGGNAGRSGAAVA 220
Query: 284 ILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFK 343
S + A + F V + PRA+ +F + + + +P C G RFK
Sbjct: 221 GPSDGKVPAEDVVEAARLAAAGQPFEVVHYPRASAPEFCVRADAVKESMRSPWCPGLRFK 280
Query: 344 MRFEMDD-SPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDR 402
M FE +D S G + G+ DP RWP S WR L V WDE + ++V PW ++
Sbjct: 281 MAFETEDLSRISWFMGTIAGVEPADPARWPLSPWRLLQVTWDEPELLQNVKRVCPWRVEL 340
Query: 403 SVSLPPL 409
S+P L
Sbjct: 341 VSSMPNL 347
>gi|304307993|gb|ADL70309.1| auxin response factor 4 [Arabidopsis thaliana]
Length = 256
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/280 (41%), Positives = 148/280 (52%), Gaps = 30/280 (10%)
Query: 375 KWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTG-LQAPPPDYPV 433
KWRCL+VRWDE SDHQE+VSPWEID SVSLP LSIQSSPR K+ G L PP P+
Sbjct: 1 KWRCLLVRWDESFVSDHQERVSPWEIDPSVSLPHLSIQSSPRPKRPWAGLLDTTPPGNPI 60
Query: 434 SARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHP-LGFEMRAPAHQSLALNGI 492
+ R GG LDFEESVR SKVLQGQEN+G SP G D +N L F M++ A+ L + +
Sbjct: 61 TKR-GGFLDFEESVRPSKVLQGQENIGSASPSQGFDVMNRRILDFAMQSHANPVLVSSRV 119
Query: 493 RKDNINELVRA--LPTSYTGFVESNRFPKVLQGQEICPLRSLTGKVDLNLGTWGKPNFGC 550
KD E V A + + +G ++ +RFP+VLQGQEIC L+S + P
Sbjct: 120 -KDRFGEFVDATGVNPACSGVMDLDRFPRVLQGQEICSLKSFPQFAGFSPAAAPNP---- 174
Query: 551 NSMNMYQASKPNIYPPPSESLSNMFFPYGDMPKTVQHHTMPPYASNLQRENVKLNSSSIQ 610
YQA+K + YP + + PY + + PP S +I
Sbjct: 175 ---FAYQANKSSYYPLALHGIRSTHVPYQNPYNAGNQTSGPP-------------SRAIN 218
Query: 611 MPAIGAEIRKANLLNEHKPVENIPTPT-FKANMRSHKDGS 649
G E RK + NE N+ FK +M + GS
Sbjct: 219 ---FGEETRKFDAQNEGGLPNNVTADLPFKIDMMGKQKGS 255
>gi|304307981|gb|ADL70303.1| auxin response factor 4 [Arabidopsis thaliana]
Length = 258
Score = 164 bits (414), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 116/280 (41%), Positives = 148/280 (52%), Gaps = 30/280 (10%)
Query: 375 KWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTG-LQAPPPDYPV 433
KWRCL+VRWDE SDHQE+VSPWEID SVSLP LSIQSSPR K+ G L PP P+
Sbjct: 1 KWRCLLVRWDESFVSDHQERVSPWEIDPSVSLPHLSIQSSPRPKRPWAGLLDTTPPGNPI 60
Query: 434 SARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHP-LGFEMRAPAHQSLALNGI 492
+ R GG LDFEESVR SKVLQGQEN+G SP G D +N L F M++ A+ L + +
Sbjct: 61 TKR-GGFLDFEESVRPSKVLQGQENIGSASPSQGFDVMNRRILDFAMQSHANPVLVSSRV 119
Query: 493 RKDNINELVRA--LPTSYTGFVESNRFPKVLQGQEICPLRSLTGKVDLNLGTWGKPNFGC 550
KD E V A + + +G ++ +RFP+VLQGQEIC L+S + P
Sbjct: 120 -KDRFGEFVDATGVNPACSGVMDLDRFPRVLQGQEICSLKSFPQFAGFSPAAAPNP---- 174
Query: 551 NSMNMYQASKPNIYPPPSESLSNMFFPYGDMPKTVQHHTMPPYASNLQRENVKLNSSSIQ 610
YQA+K + YP + + PY + + PP S +I
Sbjct: 175 ---FAYQANKSSYYPLALHGIRSTHVPYQNPYNAGNQSSGPP-------------SRAIN 218
Query: 611 MPAIGAEIRKANLLNEHKPVENIPTPT-FKANMRSHKDGS 649
G E RK + NE N+ FK +M + GS
Sbjct: 219 ---FGEETRKFDAQNEGGLPNNVTADLPFKIDMMGKQKGS 255
>gi|304307979|gb|ADL70302.1| auxin response factor 4 [Arabidopsis thaliana]
Length = 253
Score = 163 bits (413), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 106/237 (44%), Positives = 135/237 (56%), Gaps = 14/237 (5%)
Query: 375 KWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTG-LQAPPPDYPV 433
KWRCL+VRWDE SDHQE+VSPWEID SVSLP LSIQSSPR K+ G L PP P+
Sbjct: 1 KWRCLLVRWDESFVSDHQERVSPWEIDPSVSLPHLSIQSSPRPKRPWAGLLDTTPPGNPI 60
Query: 434 SARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHP-LGFEMRAPAHQSLALNGI 492
+ R GG LDFEESVR SKVLQGQEN+G SP G D +N L F M++ A+ L + +
Sbjct: 61 TKR-GGFLDFEESVRPSKVLQGQENIGSASPSQGFDVMNRRILDFAMQSHANPVLVSSRV 119
Query: 493 RKDNINELVRA--LPTSYTGFVESNRFPKVLQGQEICPLRSLTGKVDLNLGTWGKPNFGC 550
KD E V A + + +G ++ +RFP+VLQGQEIC L+S + P
Sbjct: 120 -KDRFGEFVDATGVNPACSGVMDLDRFPRVLQGQEICSLKSFPQFAGFSPAAAPNP---- 174
Query: 551 NSMNMYQASKPNIYPPPSESLSNMFFPYGDMPKTVQHHTMPP-YASNLQRENVKLNS 606
YQA+K + YP + + PY + + PP A N E K ++
Sbjct: 175 ---FAYQANKSSYYPLALHGIRSTHVPYQNPYNAGNQTSGPPSRAINFGEETRKFDA 228
>gi|304307975|gb|ADL70300.1| auxin response factor 4 [Arabidopsis thaliana]
Length = 227
Score = 163 bits (412), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 106/236 (44%), Positives = 134/236 (56%), Gaps = 14/236 (5%)
Query: 375 KWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTG-LQAPPPDYPV 433
KWRCL+VRWDE SDHQE+VSPWEID SVSLP LSIQSSPR K+ G L PP P+
Sbjct: 1 KWRCLLVRWDESFVSDHQERVSPWEIDPSVSLPHLSIQSSPRPKRPWAGLLDTTPPGNPI 60
Query: 434 SARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHP-LGFEMRAPAHQSLALNGI 492
+ R GG LDFEESVR SKVLQGQEN+G SP G D +N L F M++ A+ L + +
Sbjct: 61 TKR-GGFLDFEESVRPSKVLQGQENIGSASPSQGFDVMNRRILDFAMQSHANPVLVSSRV 119
Query: 493 RKDNINELVRA--LPTSYTGFVESNRFPKVLQGQEICPLRSLTGKVDLNLGTWGKPNFGC 550
KD E V A + + +G ++ +RFP+VLQGQEIC L+S + P
Sbjct: 120 -KDRFGEFVDATGVNPACSGVMDLDRFPRVLQGQEICSLKSFPQFAGFSPAAAPNP---- 174
Query: 551 NSMNMYQASKPNIYPPPSESLSNMFFPYGDMPKTVQHHTMPP-YASNLQRENVKLN 605
YQA+K + YP + + PY + + PP A N E K +
Sbjct: 175 ---FAYQANKSSYYPLALHGIRSAHVPYQNPYNAGNQSSGPPSRAINFGEETRKFD 227
>gi|147806415|emb|CAN76549.1| hypothetical protein VITISV_031905 [Vitis vinifera]
Length = 273
Score = 160 bits (405), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 92/195 (47%), Positives = 108/195 (55%), Gaps = 43/195 (22%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
ELWHACAGPL SLP G+ VVYFPQGH EQ
Sbjct: 24 ELWHACAGPLVSLPTVGSRVVYFPQGHSEQ------------------------------ 53
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
A+ E DEVY Q+ L P L ++ +D + E G P+K + FCKTLTAS
Sbjct: 54 -ADVETDEVYAQMTLQP--------LTPQEQKDTFLPVELG--IPSKQPTNYFCKTLTAS 102
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
DTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+A+DLH VEW+FRHI+RG R L
Sbjct: 103 DTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDVEWKFRHIFRG--RDSYLEQ 160
Query: 240 GWSIFVSQKNLVSGD 254
W + V D
Sbjct: 161 SWPVITLSGRRVGRD 175
>gi|226500250|ref|NP_001149486.1| B3 DNA binding domain containing protein [Zea mays]
gi|195627494|gb|ACG35577.1| B3 DNA binding domain containing protein [Zea mays]
gi|224031343|gb|ACN34747.1| unknown [Zea mays]
gi|295844336|gb|ADG43165.1| auxin response factor 31 [Zea mays]
gi|413920079|gb|AFW60011.1| B3 DNA binding domain containing protein [Zea mays]
Length = 462
Score = 157 bits (397), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 110/366 (30%), Positives = 165/366 (45%), Gaps = 50/366 (13%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIF-CKVVDVQ 118
++W ACA PL+ LP G+ V YFP GH EQ P +P P F C V D+
Sbjct: 21 DVWLACAAPLSRLPTVGDDVYYFPDGHAEQC-------PAHLPAPLPAPHFFPCTVTDIS 73
Query: 119 LLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTA 178
L A+ + DEV+ +++L P GL ++ + G SP + K L+
Sbjct: 74 LGADDKTDEVFAKISLRP-----GLAAASRP-------DPGSSNSPPREPLSYSIKELSQ 121
Query: 179 SDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLT 238
SD + G F VPR + +P +D++ P Q LV D G +W FRH+YR + RH+LT
Sbjct: 122 SDANGGGSFCVPRYCGDHVWPKVDFEADPPMQNLVMHDTTGKQWEFRHVYRAKQPRHVLT 181
Query: 239 TGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSV-------QPRNG------LPDSIL 285
TGWS FV+ K LV+GD ++F+R +G+L +G+RR +P G
Sbjct: 182 TGWSKFVNAKLLVAGDIIVFMRRPNGDLIVGLRRMPRYAGTLHRPGTGGDAQDPDQPPPP 241
Query: 286 SKQNSY----PNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTR 341
+N+ P + A + F V Y PR +FV+P + ++ G+
Sbjct: 242 PPRNALARVPPKDVMEAARLAAEGRPFTVTYYPRKAAGEFVVPRNEVEGVLDTLWEPGSH 301
Query: 342 FKMRFEMDDSPERR--CNGVVTGITDLDPYRWPNSKWRCLMVRWD---ECIGSDHQEQVS 396
M+F + R +G V I WR L + WD I + V+
Sbjct: 302 VLMQFAEAEDTRRTMWADGHVKAIH--------QKIWRALEIDWDVASSAISAQLGRFVN 353
Query: 397 PWEIDR 402
W++ R
Sbjct: 354 AWQVQR 359
>gi|357445391|ref|XP_003592973.1| Auxin response factor [Medicago truncatula]
gi|355482021|gb|AES63224.1| Auxin response factor [Medicago truncatula]
Length = 456
Score = 155 bits (391), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 116/369 (31%), Positives = 178/369 (48%), Gaps = 32/369 (8%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNF--DLQPQIFCKVVDV 117
E+WH CA +PK + V YFPQGHLE AS S+ +F +P C V V
Sbjct: 13 EIWHTCATAAVKIPKLHSRVYYFPQGHLEN-ASPSSSSITHTHSFLQSFRPFTLCIVSAV 71
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
LLA+ DEV+ V LL P ++LE + E +++ S F KTLT
Sbjct: 72 DLLADPHTDEVF--VKLLLTPITNDVHLENPKEEVANLNDRNEVVS--------FVKTLT 121
Query: 178 ASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL 237
SD + F +PR A++ FP LD + + SQ L D+HG +F H+ RG P+R++L
Sbjct: 122 RSDVNNARSFHIPRFCADNVFPQLDLEAESSSQHLFVTDVHGEVSKFYHVCRGFPKRNML 181
Query: 238 -TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLS 296
+ W+ FV +K LV+GD+V+F++ G++ +GIRR+ Q + K V+
Sbjct: 182 YISEWNSFVKRKKLVAGDSVIFMKDSTGKIFVGIRRNTQFVAAAAEQ--KKDELEKAVME 239
Query: 297 VVANAVSTKSMFHVFYSPRATHADFVIP---YQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
+ A K+ V+Y DFV+ + +KI NP R +++ + D S
Sbjct: 240 ALKLAEENKAFEIVYYPQGDDWCDFVVDGNVVDESMKIQWNP-----RMRVKMKTDKSSR 294
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS 413
G ++ ++ ++ WR L V WDE S +V+PW ++ P +
Sbjct: 295 IPYQGTISIVSRT------SNLWRMLQVNWDEFQVSQIPRRVNPWWVELISHKPAPT--P 346
Query: 414 SPRMKKLRT 422
P+ KK RT
Sbjct: 347 FPQTKKFRT 355
>gi|222636108|gb|EEE66240.1| hypothetical protein OsJ_22412 [Oryza sativa Japonica Group]
Length = 630
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 92/274 (33%), Positives = 134/274 (48%), Gaps = 43/274 (15%)
Query: 203 YKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGK 262
+ + R ++AKD+HGV W+FRHIYRG PRRHLLTTGWS FV+QK LV+GD+++F+R +
Sbjct: 89 FAKIRLVPTVLAKDVHGVVWKFRHIYRGTPRRHLLTTGWSTFVNQKKLVAGDSIVFMRTE 148
Query: 263 DGELRLGIRRSVQPRNGLPDSILS------------------------------------ 286
+G+L +GIRR+ + G P+ +
Sbjct: 149 NGDLCVGIRRAKKGGVGGPEFLPPPPPPPPTPAAGGNYGGFSMFLRGDDDGNKMAAAARG 208
Query: 287 --KQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKM 344
+ P + AN + F V Y PRA+ +F + + G RFKM
Sbjct: 209 KVRARVRPEEVVEAANLAVSGQPFEVVYYPRASTPEFCVKAGAVRAAMRTQWFAGMRFKM 268
Query: 345 RFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRS 403
FE +DS G V+ + DP RWPNS WR L V WDE + ++VSPW ++
Sbjct: 269 AFETEDSSRISWFMGTVSAVQVADPIRWPNSPWRLLQVSWDEPDLLQNVKRVSPWLVELV 328
Query: 404 VSLPPLSIQS-SPRMKKLRTGLQAPPPDYPVSAR 436
++P + + SP KKL L P+ P+ +
Sbjct: 329 SNMPAIHLAPFSPPRKKLCVPLY---PELPIDGQ 359
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAG + +P + V YFPQGH E + P+E P + + C+V V+
Sbjct: 23 QLWHACAGGMVQMPPVSSKVYYFPQGHAEH---AQGHGPVEFPGGRVPALVLCRVAGVRF 79
Query: 120 LANKENDEVYTQVALLP 136
+A+ + DEV+ ++ L+P
Sbjct: 80 MADPDTDEVFAKIRLVP 96
>gi|298111058|gb|ADB96339.2| auxin response factor 4 [Arabidopsis thaliana]
Length = 236
Score = 151 bits (381), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 101/232 (43%), Positives = 130/232 (56%), Gaps = 14/232 (6%)
Query: 380 MVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTG-LQAPPPDYPVSARGG 438
+VRWDE SDHQE+VSPWEID SVSLP LSIQSSPR K+ G L PP P++ R G
Sbjct: 1 LVRWDESFVSDHQERVSPWEIDPSVSLPHLSIQSSPRPKRPWAGLLDTTPPGNPITKR-G 59
Query: 439 GVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHP-LGFEMRAPAHQSLALNGIRKDNI 497
G LDFEESVR SKVLQGQEN+G SP G D +N L F M++ A+ L + + KD
Sbjct: 60 GFLDFEESVRPSKVLQGQENIGSASPSQGFDVMNRRILDFAMQSHANPVLVSSRV-KDRF 118
Query: 498 NELVRALPT--SYTGFVESNRFPKVLQGQEICPLRSLTGKVDLNLGTWGKPNFGCNSMNM 555
E V A+ + +G ++ +RFP+VLQGQEIC L+S + P
Sbjct: 119 GEFVDAIGVNPACSGVMDLDRFPRVLQGQEICSLKSFPQFAGFSPAAAPNP-------FA 171
Query: 556 YQASKPNIYPPPSESLSNMFFPYGDMPKTVQHHTMPP-YASNLQRENVKLNS 606
YQA+K + YP + + PY + + PP A N E K ++
Sbjct: 172 YQANKSSYYPLALHGIRSTHVPYQNPYNAGNQSSGPPSRAINFGEETRKFDA 223
>gi|304307991|gb|ADL70308.1| auxin response factor 4 [Arabidopsis thaliana]
Length = 234
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 101/231 (43%), Positives = 129/231 (55%), Gaps = 14/231 (6%)
Query: 381 VRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTG-LQAPPPDYPVSARGGG 439
VRWDE SDHQE+VSPWEID SVSLP LSIQSSPR K+ G L PP P++ R GG
Sbjct: 1 VRWDESFVSDHQERVSPWEIDPSVSLPHLSIQSSPRHKRPWAGLLDTTPPGNPITKR-GG 59
Query: 440 VLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHP-LGFEMRAPAHQSLALNGIRKDNIN 498
LDFEESVR SKVLQGQEN+G SP G D +N L F M++ A+ L + + KD
Sbjct: 60 FLDFEESVRPSKVLQGQENIGSASPSQGFDVMNRRILDFAMQSHANPVLVSSRV-KDRFG 118
Query: 499 ELVRA--LPTSYTGFVESNRFPKVLQGQEICPLRSLTGKVDLNLGTWGKPNFGCNSMNMY 556
E V A + + +G ++ +RFP+VLQGQEIC L+S + P Y
Sbjct: 119 EFVDATGVNPACSGVMDLDRFPRVLQGQEICSLKSFPQFAGFSPAAAPNP-------FAY 171
Query: 557 QASKPNIYPPPSESLSNMFFPYGDMPKTVQHHTMPP-YASNLQRENVKLNS 606
QA+K + YP + + PY + + PP A N E K ++
Sbjct: 172 QANKSSYYPLALHGIRSTHVPYQNPYNAGNQSSGPPSRAINFGEETRKFDA 222
>gi|304307987|gb|ADL70306.1| auxin response factor 4 [Arabidopsis thaliana]
Length = 247
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 101/231 (43%), Positives = 129/231 (55%), Gaps = 14/231 (6%)
Query: 381 VRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTG-LQAPPPDYPVSARGGG 439
VRWDE SDHQE+VSPWEID SVSLP LSIQSSPR K+ G L PP P++ R GG
Sbjct: 1 VRWDESFVSDHQERVSPWEIDPSVSLPHLSIQSSPRPKRPWAGLLDTTPPGNPITKR-GG 59
Query: 440 VLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHP-LGFEMRAPAHQSLALNGIRKDNIN 498
LDFEESVR SKVLQGQEN+G SP G D +N L F M++ A+ L + + KD
Sbjct: 60 FLDFEESVRPSKVLQGQENIGSASPSQGFDVMNRRILDFAMQSHANPVLVSSRV-KDRFG 118
Query: 499 ELVRA--LPTSYTGFVESNRFPKVLQGQEICPLRSLTGKVDLNLGTWGKPNFGCNSMNMY 556
E V A + + +G ++ +RFP+VLQGQEIC L+S + P Y
Sbjct: 119 EFVDATGVNPACSGVMDLDRFPRVLQGQEICSLKSFPQFAGFSPAAAPNP-------FAY 171
Query: 557 QASKPNIYPPPSESLSNMFFPYGDMPKTVQHHTMPP-YASNLQRENVKLNS 606
QA+K + YP + + PY + + PP A N E K ++
Sbjct: 172 QANKSSYYPLALHGIRSTHVPYQNPYNAGNQSSGPPSRAINFGEETRKFDA 222
>gi|304307985|gb|ADL70305.1| auxin response factor 4 [Arabidopsis thaliana]
Length = 222
Score = 149 bits (376), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 101/231 (43%), Positives = 129/231 (55%), Gaps = 14/231 (6%)
Query: 381 VRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTG-LQAPPPDYPVSARGGG 439
VRWDE SDHQE+VSPWEID SVSLP LSIQSSPR K+ G L PP P++ R GG
Sbjct: 1 VRWDESFVSDHQERVSPWEIDPSVSLPHLSIQSSPRPKRPWAGLLDTTPPGNPITKR-GG 59
Query: 440 VLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHP-LGFEMRAPAHQSLALNGIRKDNIN 498
LDFEESVR SKVLQGQEN+G SP G D +N L F M++ A+ L + + KD
Sbjct: 60 FLDFEESVRPSKVLQGQENIGSASPSQGFDVMNRRILDFAMQSHANPVLVSSRV-KDRFG 118
Query: 499 ELVRA--LPTSYTGFVESNRFPKVLQGQEICPLRSLTGKVDLNLGTWGKPNFGCNSMNMY 556
E V A + + +G ++ +RFP+VLQGQEIC L+S + P Y
Sbjct: 119 EFVDATGVNPACSGVMDLDRFPRVLQGQEICSLKSFPQFAGFSPAAAPNP-------FAY 171
Query: 557 QASKPNIYPPPSESLSNMFFPYGDMPKTVQHHTMPP-YASNLQRENVKLNS 606
QA+K + YP + + PY + + PP A N E K ++
Sbjct: 172 QANKSSYYPLALHGIRSTHVPYQNPYNAGNQSSGPPSRAINFGEETRKFDA 222
>gi|284811205|gb|ADB96341.1| auxin response factor 4 [Arabidopsis thaliana]
gi|304307995|gb|ADL70310.1| auxin response factor 4 [Arabidopsis thaliana]
Length = 233
Score = 149 bits (376), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 101/231 (43%), Positives = 129/231 (55%), Gaps = 14/231 (6%)
Query: 381 VRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTG-LQAPPPDYPVSARGGG 439
VRWDE SDHQE+VSPWEID SVSLP LSIQSSPR K+ G L PP P++ R GG
Sbjct: 1 VRWDESFVSDHQERVSPWEIDPSVSLPHLSIQSSPRPKRPWAGLLDTTPPGNPITKR-GG 59
Query: 440 VLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHP-LGFEMRAPAHQSLALNGIRKDNIN 498
LDFEESVR SKVLQGQEN+G SP G D +N L F M++ A+ L + + KD
Sbjct: 60 FLDFEESVRPSKVLQGQENIGSASPSQGFDVMNRRILDFAMQSHANPVLVSSRV-KDRFG 118
Query: 499 ELVRA--LPTSYTGFVESNRFPKVLQGQEICPLRSLTGKVDLNLGTWGKPNFGCNSMNMY 556
E V A + + +G ++ +RFP+VLQGQEIC L+S + P Y
Sbjct: 119 EFVDATGVNPACSGVMDLDRFPRVLQGQEICSLKSFPQFAGFSPAAAPNP-------FAY 171
Query: 557 QASKPNIYPPPSESLSNMFFPYGDMPKTVQHHTMPP-YASNLQRENVKLNS 606
QA+K + YP + + PY + + PP A N E K ++
Sbjct: 172 QANKSSYYPLALHGIRSTHVPYQNPYNAGNQSSGPPSRAINFGEETRKFDA 222
>gi|298111060|gb|ADB96342.2| auxin response factor 4 [Arabidopsis thaliana]
Length = 236
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 101/231 (43%), Positives = 129/231 (55%), Gaps = 14/231 (6%)
Query: 381 VRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTG-LQAPPPDYPVSARGGG 439
VRWDE SDHQE+VSPWEID SVSLP LSIQSSPR K+ G L PP P++ R GG
Sbjct: 1 VRWDESFVSDHQERVSPWEIDPSVSLPHLSIQSSPRPKRPWAGLLDTTPPGNPITKR-GG 59
Query: 440 VLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHP-LGFEMRAPAHQSLALNGIRKDNIN 498
LDFEESVR SKVLQGQEN+G SP G D +N L F M++ A+ L + + KD
Sbjct: 60 FLDFEESVRPSKVLQGQENIGSASPSQGFDVMNRRILDFAMQSHANPVLVSSRV-KDRFG 118
Query: 499 ELVRA--LPTSYTGFVESNRFPKVLQGQEICPLRSLTGKVDLNLGTWGKPNFGCNSMNMY 556
E V A + + +G ++ +RFP+VLQGQEIC L+S + P Y
Sbjct: 119 EFVDATGVNPACSGVMDLDRFPRVLQGQEICSLKSFPQFAGFSPAAAPNP-------FAY 171
Query: 557 QASKPNIYPPPSESLSNMFFPYGDMPKTVQHHTMPP-YASNLQRENVKLNS 606
QA+K + YP + + PY + + PP A N E K ++
Sbjct: 172 QANKSSYYPLALHGIRSTHVPYQNPYNAGNQTSGPPSRAINFGEETRKFDA 222
>gi|284811199|gb|ADB96338.1| auxin response factor 4 [Arabidopsis thaliana]
gi|284811203|gb|ADB96340.1| auxin response factor 4 [Arabidopsis thaliana]
gi|304307989|gb|ADL70307.1| auxin response factor 4 [Arabidopsis thaliana]
Length = 235
Score = 149 bits (375), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 101/231 (43%), Positives = 129/231 (55%), Gaps = 14/231 (6%)
Query: 381 VRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTG-LQAPPPDYPVSARGGG 439
VRWDE SDHQE+VSPWEID SVSLP LSIQSSPR K+ G L PP P++ R GG
Sbjct: 1 VRWDESFVSDHQERVSPWEIDPSVSLPHLSIQSSPRPKRPWAGLLDTTPPGNPITKR-GG 59
Query: 440 VLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHP-LGFEMRAPAHQSLALNGIRKDNIN 498
LDFEESVR SKVLQGQEN+G SP G D +N L F M++ A+ L + + KD
Sbjct: 60 FLDFEESVRPSKVLQGQENIGSASPSQGFDVMNRRILDFAMQSHANPVLVSSRV-KDRFG 118
Query: 499 ELVRA--LPTSYTGFVESNRFPKVLQGQEICPLRSLTGKVDLNLGTWGKPNFGCNSMNMY 556
E V A + + +G ++ +RFP+VLQGQEIC L+S + P Y
Sbjct: 119 EFVDATGVNPACSGVMDLDRFPRVLQGQEICSLKSFPQFAGFSPAAAPNP-------FAY 171
Query: 557 QASKPNIYPPPSESLSNMFFPYGDMPKTVQHHTMPP-YASNLQRENVKLNS 606
QA+K + YP + + PY + + PP A N E K ++
Sbjct: 172 QANKSSYYPLALHGIRSTHVPYQNPYNAGNQTSGPPSRAINFGEETRKFDA 222
>gi|345289915|gb|AEN81449.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289917|gb|AEN81450.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289919|gb|AEN81451.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289921|gb|AEN81452.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289923|gb|AEN81453.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289925|gb|AEN81454.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289927|gb|AEN81455.1| AT2G28350-like protein, partial [Capsella rubella]
gi|345289929|gb|AEN81456.1| AT2G28350-like protein, partial [Capsella rubella]
Length = 152
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/125 (56%), Positives = 89/125 (71%), Gaps = 3/125 (2%)
Query: 169 PHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIY 228
P F KTLT SD + GGFSVPR AE FP LDY + P Q ++AKD+HG W+FRHIY
Sbjct: 9 PASFAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIY 68
Query: 229 RGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGL-PDSILSK 287
RG PRRHLLTTGWS FV+QK L++GD+++FLR + G+L +GIRR+ R GL + + S
Sbjct: 69 RGTPRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRA--KRGGLGSNGLASD 126
Query: 288 QNSYP 292
N YP
Sbjct: 127 NNPYP 131
>gi|304307997|gb|ADL70311.1| auxin response factor 4 [Arabidopsis thaliana]
Length = 221
Score = 148 bits (374), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/230 (43%), Positives = 128/230 (55%), Gaps = 14/230 (6%)
Query: 381 VRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTG-LQAPPPDYPVSARGGG 439
VRWDE SDHQE+VSPWEID SVSLP LSIQSSPR K+ G L PP P++ R GG
Sbjct: 1 VRWDESFVSDHQERVSPWEIDPSVSLPHLSIQSSPRPKRPWAGLLDTTPPGNPITKR-GG 59
Query: 440 VLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHP-LGFEMRAPAHQSLALNGIRKDNIN 498
LDFEESVR SKVLQGQEN+G SP G D +N L F M++ A+ L + + KD
Sbjct: 60 FLDFEESVRPSKVLQGQENIGSASPSQGFDVMNRRILDFAMQSHANPVLVSSRV-KDRFG 118
Query: 499 ELVRA--LPTSYTGFVESNRFPKVLQGQEICPLRSLTGKVDLNLGTWGKPNFGCNSMNMY 556
E V A + + +G ++ +RFP+VLQGQEIC L+S + P Y
Sbjct: 119 EFVDATGVNPACSGVMDLDRFPRVLQGQEICSLKSFPQFAGFSPAAAPNP-------FAY 171
Query: 557 QASKPNIYPPPSESLSNMFFPYGDMPKTVQHHTMPP-YASNLQRENVKLN 605
QA+K + YP + + PY + + PP A N E K +
Sbjct: 172 QANKSSYYPLALHGIRSTHVPYQNPYNAGNQTSGPPSRAINFGEETRKFD 221
>gi|295829026|gb|ADG38182.1| AT2G28350-like protein [Capsella grandiflora]
gi|295829028|gb|ADG38183.1| AT2G28350-like protein [Capsella grandiflora]
gi|295829032|gb|ADG38185.1| AT2G28350-like protein [Capsella grandiflora]
Length = 134
Score = 148 bits (373), Expect = 1e-32, Method: Composition-based stats.
Identities = 70/122 (57%), Positives = 88/122 (72%), Gaps = 3/122 (2%)
Query: 172 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQ 231
F KTLT SD + GGFSVPR AE FP LDY + P Q ++AKD+HG W+FRHIYRG
Sbjct: 3 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGT 62
Query: 232 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGL-PDSILSKQNS 290
PRRHLLTTGWS FV+QK L++GD+++FLR + G+L +GIRR+ R GL + + S N
Sbjct: 63 PRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRA--KRGGLGSNGLASDNNP 120
Query: 291 YP 292
YP
Sbjct: 121 YP 122
>gi|304307999|gb|ADL70312.1| auxin response factor 4 [Arabidopsis thaliana]
Length = 220
Score = 148 bits (373), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 101/229 (44%), Positives = 127/229 (55%), Gaps = 14/229 (6%)
Query: 381 VRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTG-LQAPPPDYPVSARGGG 439
VRWDE SDHQE+VSPWEID SVSLP LSIQSSPR K+ G L PP P++ R GG
Sbjct: 1 VRWDESFVSDHQERVSPWEIDPSVSLPHLSIQSSPRPKRPWAGLLDTTPPGNPITKR-GG 59
Query: 440 VLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHP-LGFEMRAPAHQSLALNGIRKDNIN 498
LDFEESVR SKVLQGQEN+G SP G D +N L F M++ A+ L + + KD
Sbjct: 60 FLDFEESVRPSKVLQGQENIGSASPSQGFDVMNRRILDFAMQSHANPVLVSSRV-KDRFG 118
Query: 499 ELVRA--LPTSYTGFVESNRFPKVLQGQEICPLRSLTGKVDLNLGTWGKPNFGCNSMNMY 556
E V A + + +G ++ +RFP+VLQGQEIC L+S + P Y
Sbjct: 119 EFVDATGVNPACSGVMDLDRFPRVLQGQEICSLKSFPQFAGFSPAAAPNP-------FAY 171
Query: 557 QASKPNIYPPPSESLSNMFFPYGDMPKTVQHHTMPP-YASNLQRENVKL 604
QA+K + YP + + PY + + PP A N E K
Sbjct: 172 QANKSSYYPLALHGIRSTHVPYQNPYNAGNQSSGPPSRAINFGEETRKF 220
>gi|295829030|gb|ADG38184.1| AT2G28350-like protein [Capsella grandiflora]
Length = 134
Score = 148 bits (373), Expect = 1e-32, Method: Composition-based stats.
Identities = 70/122 (57%), Positives = 88/122 (72%), Gaps = 3/122 (2%)
Query: 172 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQ 231
F KTLT SD + GGFSVPR AE FP LDY + P Q ++AKD+HG W+FRHIYRG
Sbjct: 3 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGT 62
Query: 232 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGL-PDSILSKQNS 290
PRRHLLTTGWS FV+QK L++GD+++FLR + G+L +GIRR+ R GL + + S N
Sbjct: 63 PRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRA--KRGGLGSNGLTSDNNP 120
Query: 291 YP 292
YP
Sbjct: 121 YP 122
>gi|295829034|gb|ADG38186.1| AT2G28350-like protein [Capsella grandiflora]
Length = 138
Score = 148 bits (373), Expect = 1e-32, Method: Composition-based stats.
Identities = 70/122 (57%), Positives = 88/122 (72%), Gaps = 3/122 (2%)
Query: 172 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQ 231
F KTLT SD + GGFSVPR AE FP LDY + P Q ++AKD+HG W+FRHIYRG
Sbjct: 3 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGT 62
Query: 232 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGL-PDSILSKQNS 290
PRRHLLTTGWS FV+QK L++GD+++FLR + G+L +GIRR+ R GL + + S N
Sbjct: 63 PRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRA--KRGGLGSNGLTSDNNP 120
Query: 291 YP 292
YP
Sbjct: 121 YP 122
>gi|295829036|gb|ADG38187.1| AT2G28350-like protein [Capsella grandiflora]
Length = 134
Score = 148 bits (373), Expect = 2e-32, Method: Composition-based stats.
Identities = 70/122 (57%), Positives = 88/122 (72%), Gaps = 3/122 (2%)
Query: 172 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQ 231
F KTLT SD + GGFSVPR AE FP LDY + P Q ++AKD+HG W+FRHIYRG
Sbjct: 3 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGT 62
Query: 232 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGL-PDSILSKQNS 290
PRRHLLTTGWS FV+QK L++GD+++FLR + G+L +GIRR+ R GL + + S N
Sbjct: 63 PRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRA--KRGGLGSNGLXSDNNP 120
Query: 291 YP 292
YP
Sbjct: 121 YP 122
>gi|304307983|gb|ADL70304.1| auxin response factor 4 [Arabidopsis thaliana]
Length = 219
Score = 147 bits (372), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 101/228 (44%), Positives = 127/228 (55%), Gaps = 14/228 (6%)
Query: 381 VRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTG-LQAPPPDYPVSARGGG 439
VRWDE SDHQE+VSPWEID SVSLP LSIQSSPR K+ G L PP P++ R GG
Sbjct: 1 VRWDESFVSDHQERVSPWEIDPSVSLPHLSIQSSPRPKRPWAGLLDTTPPGNPITKR-GG 59
Query: 440 VLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHP-LGFEMRAPAHQSLALNGIRKDNIN 498
LDFEESVR SKVLQGQEN+G SP G D +N L F M++ A+ L + + KD
Sbjct: 60 FLDFEESVRPSKVLQGQENIGSASPSQGFDVMNRRILDFAMQSHANPVLVSSRV-KDRFG 118
Query: 499 ELVRA--LPTSYTGFVESNRFPKVLQGQEICPLRSLTGKVDLNLGTWGKPNFGCNSMNMY 556
E V A + + +G ++ +RFP+VLQGQEIC L+S + P Y
Sbjct: 119 EFVDATGVNPACSGVMDLDRFPRVLQGQEICSLKSFPQFAGFSPAAAPNP-------FAY 171
Query: 557 QASKPNIYPPPSESLSNMFFPYGDMPKTVQHHTMPP-YASNLQRENVK 603
QA+K + YP + + PY + + PP A N E K
Sbjct: 172 QANKSSYYPLALHGIRSTHVPYQNPYNAGNQSSGPPSRAINFGEETRK 219
>gi|297836890|ref|XP_002886327.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332167|gb|EFH62586.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 216
Score = 144 bits (364), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/101 (72%), Positives = 80/101 (79%), Gaps = 6/101 (5%)
Query: 316 ATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSK 375
ATHA+FVIPY+KY+ I NPICIGTRF MRFEM+DSPE RC GVV G+ DLDPYRWPNSK
Sbjct: 97 ATHAEFVIPYEKYITSIRNPICIGTRFIMRFEMNDSPE-RCAGVVAGVYDLDPYRWPNSK 155
Query: 376 WRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPR 416
W M + SDHQE+VS WEID SVSLP LSIQSSPR
Sbjct: 156 WCDGM-----SLVSDHQERVSLWEIDPSVSLPHLSIQSSPR 191
>gi|224286963|gb|ACN41183.1| unknown [Picea sitchensis]
Length = 450
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/135 (53%), Positives = 91/135 (67%), Gaps = 14/135 (10%)
Query: 674 QSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTD 733
QS RSCTKVHKQGS +GRA+DL + GY +L+ ELE +FN+EG L DP KGW+++YTD
Sbjct: 314 QSNSTRSCTKVHKQGSALGRAVDLTKFEGYTELIRELEQMFNIEGELEDPNKGWQVVYTD 373
Query: 734 SENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGT-------------TDDTQSCLD 780
+E D+M+VGDDPW EFC+ V KI+IYT+EEVEKMT T T +T C D
Sbjct: 374 NEGDMMLVGDDPWQEFCSIVRKIYIYTREEVEKMTPQTPSAKLKGCSEDLATKETSRCSD 433
Query: 781 -QAPVIMEVSVSKSS 794
Q I V+ +SS
Sbjct: 434 RQDSSIAGVTAERSS 448
>gi|295829038|gb|ADG38188.1| AT2G28350-like protein [Neslia paniculata]
Length = 135
Score = 143 bits (361), Expect = 3e-31, Method: Composition-based stats.
Identities = 63/102 (61%), Positives = 79/102 (77%)
Query: 172 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQ 231
F KTLT SD + GGFSVPR AE FP LDY + P Q ++AKD+HG W+FRHIYRG
Sbjct: 3 FAKTLTQSDANNGGGFSVPRYCAETIFPRLDYTAEPPVQTVIAKDIHGETWKFRHIYRGT 62
Query: 232 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRS 273
PRRHLLTTGWS FV+QK L++GD+++FLR + G+L +GIRR+
Sbjct: 63 PRRHLLTTGWSTFVNQKKLIAGDSIVFLRSESGDLCVGIRRA 104
>gi|413943363|gb|AFW76012.1| hypothetical protein ZEAMMB73_306865 [Zea mays]
Length = 631
Score = 140 bits (353), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/216 (38%), Positives = 121/216 (56%), Gaps = 11/216 (5%)
Query: 258 FLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRAT 317
+R + +L LGIRR+ +P+ +P S+LS + + +L+ A+A ST S F +FY+PRA+
Sbjct: 5 LVRNDNNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAASTNSRFTIFYNPRAS 64
Query: 318 HADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKW 376
++FVIP KYVK + + I +G RF+M FE ++S RR G +TGI+DLD RWPNS W
Sbjct: 65 PSEFVIPLAKYVKAVYHTRISVGMRFRMLFETEESSVRRYMGTITGISDLDSVRWPNSHW 124
Query: 377 RCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSAR 436
R + V WDE D Q +VS WEI+ + P + R+K+ P P S
Sbjct: 125 RSVKVGWDESTAGDRQPRVSLWEIEPLTTFPTYTSPFPLRLKR-------PWPTGLPSLH 177
Query: 437 GGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVN 472
GG D S+ L+ N GF S +G +N
Sbjct: 178 GGKDDDLANSL---MWLRDTTNPGFQSLNFGGLGMN 210
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 47/66 (71%), Gaps = 2/66 (3%)
Query: 683 KVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMVV 741
KV+K G+ GR++D+ R + Y++L EL LF +EG L DP + GW++++ D E DV++V
Sbjct: 567 KVYKSGT-YGRSLDITRFSSYHELRRELGRLFGLEGQLEDPLRSGWQLVFVDREEDVLLV 625
Query: 742 GDDPWH 747
GDDPW
Sbjct: 626 GDDPWQ 631
>gi|296080887|emb|CBI18816.3| unnamed protein product [Vitis vinifera]
Length = 202
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/117 (58%), Positives = 83/117 (70%), Gaps = 10/117 (8%)
Query: 124 ENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASDTST 183
E DEVY Q+ L P L ++ +D + E G P+K + FCKTL ASDTST
Sbjct: 96 ETDEVYAQMTLQP--------LSPQEQKDAYLPAELG--VPSKQPSNYFCKTLIASDTST 145
Query: 184 HGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTG 240
HGGFSVPRRAAE FPPLD+ QQ P+QEL+A+DLH EW+FRHI+RGQP+RHLLTTG
Sbjct: 146 HGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTG 202
>gi|413946060|gb|AFW78709.1| hypothetical protein ZEAMMB73_248195 [Zea mays]
Length = 429
Score = 139 bits (349), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 124/414 (29%), Positives = 183/414 (44%), Gaps = 71/414 (17%)
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
+LS VAN++ +S+FH+ ++PR ++F++PY K++K + +GTRFK+ E +D+ E
Sbjct: 1 MLSAVANSLDNRSIFHICFNPRVGASEFIVPYCKFLKSLNYHFSVGTRFKVGCENEDANE 60
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS 413
R G++ GI+++DP WP SKW+ L+++WD HQ +VSPW+I+ S ++ +
Sbjct: 61 RSF-GLIIGISEVDPIHWPGSKWKSLLIKWDGATKYSHQNRVSPWDIEGVGSSVSVTHRL 119
Query: 414 SPRMKKLRTGLQAPPPDY--PVSARGGGVLDFEESVRSSKVLQGQENV------------ 459
S + K RT L PP D P+ G G D E+ R +VLQGQE V
Sbjct: 120 SSSVSK-RTKLCFPPSDLDTPI-LDGNGRPDSVETERFHRVLQGQELVHSSIHGTACSHS 177
Query: 460 -------GFVSPLYGCDTVNHPLGFEMRAPAHQSLALNGIRKDNINELVRALPTSYTGFV 512
G + D N + M P H L G + GF
Sbjct: 178 SDSPRCQGSYGRRFSADAWNCKMNDVMSGPRH--LNATGFAYQPL------------GFS 223
Query: 513 ESNRFPKVLQGQEICPLRSLTGKVDLNLGTWGKPNFGCNSMNMYQASKPNIYPPPSESLS 572
ES +F +VLQGQE+ + N GT +P Y S++
Sbjct: 224 ESVKFSEVLQGQEMSQAVPSFMRSAFNSGT------------QNGRVRPFDYVQRSDATQ 271
Query: 573 NMFFPYGDMPKTVQH---------HTMPPYA---SNLQRENVKLNSSSIQMPAIGAEIRK 620
++P T H TM P+A RE V S + AIG E
Sbjct: 272 GYALQQFNLPATEVHSPSSVLMFNQTMVPHAELDGATNREEVH-GSRYLSSNAIGREAEP 330
Query: 621 ANLLNEHKPVEN----IPTPTFKANMRSHKDGSFNGTAAG---CKLFGFSLTSE 667
+ + + N + T A R+ + GS G AG CKLFGFSLT +
Sbjct: 331 WPSMQQQRASVNGSEPLDTTEASAPARNAESGSV-GRGAGRSNCKLFGFSLTEK 383
>gi|296088132|emb|CBI35553.3| unnamed protein product [Vitis vinifera]
Length = 187
Score = 138 bits (348), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/120 (57%), Positives = 84/120 (70%), Gaps = 10/120 (8%)
Query: 122 NKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASDT 181
N E DEVY Q+ L P L ++ +D + E G P+K + FCKTL ASDT
Sbjct: 67 NFETDEVYAQMTLQP--------LSPQEQKDAYLPAELG--VPSKQPSNYFCKTLIASDT 116
Query: 182 STHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGW 241
STHGGFSVPRRAAE FP LD+ QQ P+QEL+A+DLH EW+FRHI+RGQP+RHLLTTG+
Sbjct: 117 STHGGFSVPRRAAEKVFPSLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGY 176
>gi|413920088|gb|AFW60020.1| hypothetical protein ZEAMMB73_636851 [Zea mays]
Length = 366
Score = 135 bits (340), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/235 (37%), Positives = 112/235 (47%), Gaps = 37/235 (15%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQ-----VASSSAFPPIEVPNFDLQPQIFCKV 114
++W ACA P + +P G V YFP GH EQ + +S FP C V
Sbjct: 21 DVWLACAVPFSRVPTVGAEVYYFPDGHAEQHLLAPLPASHRFP------------CTCTV 68
Query: 115 VDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPH---M 171
DV L A DEV+ +++L P P E G G + ST
Sbjct: 69 TDVSLGAEDRTDEVFAKISLRPGPAAASR------------PEPGPGPGSSNSTRQGLSY 116
Query: 172 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQ 231
F L DTST G F +PR E FP LD P Q+LV +D G W+F HIY +
Sbjct: 117 FVNELLHRDTSTSGMFCIPRYCTEHIFPKLDLNANPPEQDLVMRDTRGKPWQFHHIYVVK 176
Query: 232 PRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRR-----SVQPRNGLP 281
R+H LT GWS FV K LV+GD ++F+R +G+L LG+RR S +PR P
Sbjct: 177 IRQHRLTAGWSEFVDAKLLVAGDTIVFMRHPNGDLILGLRRKATRTSWRPRASPP 231
>gi|357489169|ref|XP_003614872.1| Auxin response factor [Medicago truncatula]
gi|355516207|gb|AES97830.1| Auxin response factor [Medicago truncatula]
Length = 523
Score = 134 bits (337), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/381 (28%), Positives = 173/381 (45%), Gaps = 61/381 (16%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQ-------PQIFC 112
++W AGP +PK G+ V YF +GHLE SS PN + + P + C
Sbjct: 12 KIWQIRAGPAVKIPKIGSKVYYFSEGHLEHACSS--------PNIETELLLCLRPPSVLC 63
Query: 113 KVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRS-----PTKS 167
+ V LLAN DEV+ ++ L P + ++ D EE G + +
Sbjct: 64 IISSVDLLANLHTDEVFAKLLLTPVTTDGSVQIQEPAPPDFPDKEENDGNNLVVQVQEPA 123
Query: 168 TPHM-------------FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVA 214
P + + K LT SD T G VPR E FP LD + S++L
Sbjct: 124 PPEVPDEEDDDSNNLVSYVKILTQSD--TQSGLFVPRECMELIFPNLDLEDPMQSEKLSV 181
Query: 215 KDLHGVEWRFRHIYRGQP-RRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGI-RR 272
D+ V W +++ Y + + TTGWS FV +K LV+ D+V+F++ G++ +GI R+
Sbjct: 182 TDIQDVVWTYKYSYHVKKLNSYKFTTGWSQFVRKKKLVALDSVVFIKNSAGKIFVGICRK 241
Query: 273 SVQP----RNGLPDSILSKQNSYPNVLSVVANAV--STKSM-FHVFYSPRATHADFVIPY 325
++ P G +++ K V +AV + K+M F V Y P A DFV+
Sbjct: 242 AMYPATEEEGGKSENLTEK---------AVKDAVELAGKNMAFQVVYYPTANWCDFVVDA 292
Query: 326 QKYVKIIMNPICIGTRFKMRF-EMDDSPERRC----NGVVTGITDLDPYRWPNSKWRCLM 380
+ + N G K+R E S ++ G ++ ++++ P P+ WR L
Sbjct: 293 SVVDEAMKNGWEFGMGIKLRLNEFASSNSKKTYYQPKGTISNMSNV-PSNVPS--WRMLQ 349
Query: 381 VRWDECIGSDHQEQVSPWEID 401
V WD S + +V+PW++D
Sbjct: 350 VNWDGPDISQNPNRVNPWQVD 370
>gi|321150001|gb|ADW66148.1| auxin response factor [Solanum nigrum]
Length = 80
Score = 132 bits (332), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 66/82 (80%), Positives = 73/82 (89%), Gaps = 3/82 (3%)
Query: 728 RILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI-GTTDDTQSCLDQAPVIM 786
RILYTDSEND+MVVGDDPWHEFC VSKIHIYTQEEVEKMTI G +DDTQSCL++AP IM
Sbjct: 1 RILYTDSENDMMVVGDDPWHEFCEVVSKIHIYTQEEVEKMTIEGISDDTQSCLEEAPAIM 60
Query: 787 EVSVSKSSSVSQPDSSPTVVRV 808
+ VSKS SV QPDSSPTV+R+
Sbjct: 61 D--VSKSFSVGQPDSSPTVIRI 80
>gi|326493184|dbj|BAJ85053.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 614
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 118/196 (60%), Gaps = 8/196 (4%)
Query: 270 IRRSVQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYV 329
RR+++ + +P S++S + + VL+ +A++TKSMF V+Y PR + ++F+IPY +Y+
Sbjct: 37 FRRAMRQLSNVPSSVISSHSMHLGVLATAWHAINTKSMFTVYYKPRTSPSEFIIPYDQYM 96
Query: 330 KIIMNPICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGS 389
+ + N IG RF+MRFE +++PE+R G + G +LD WP S WR L VRWDE
Sbjct: 97 ESVKNNYSIGMRFRMRFEGEEAPEQRFTGTIVGSENLDQL-WPESNWRSLKVRWDEPSTI 155
Query: 390 DHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGGV-LDFEESV- 447
++VSPW+I+ S PP++ R+K+ R + P+ V + G +D + +
Sbjct: 156 PRPDRVSPWKIE-PASSPPVNPLPLSRVKRPRPNVPPVSPESSVLTKEGATKIDMDSAQA 214
Query: 448 ----RSSKVLQGQENV 459
++S VLQGQE++
Sbjct: 215 QQRNQNSMVLQGQEHM 230
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/95 (52%), Positives = 67/95 (70%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYT 732
S RSCTKVHKQG +GR++DL + Y++L +EL+ +F G L + W+I+YT
Sbjct: 487 SHGASTRSCTKVHKQGVALGRSVDLSKFGDYDELTAELDRMFEFGGELMSSNRDWQIVYT 546
Query: 733 DSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
D E D+M+VGDDPW EFC+ V KI IYT+EEV+KM
Sbjct: 547 DPEGDMMLVGDDPWEEFCSIVRKIFIYTKEEVQKM 581
>gi|413920953|gb|AFW60885.1| hypothetical protein ZEAMMB73_247628 [Zea mays]
Length = 192
Score = 130 bits (328), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/149 (47%), Positives = 95/149 (63%), Gaps = 14/149 (9%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKVV 115
+Y ELW+ CAGPL ++P+ G+ V YFPQGH+EQV AS++ + +DL +I C+V+
Sbjct: 39 MYTELWNLCAGPLVTVPRVGDKVYYFPQGHIEQVEASTNQVAEQHMQFYDLPWKILCEVM 98
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPT---KSTPHMF 172
+V+L A +NDEVY Q+ LLP+ + E+ G EE P + H F
Sbjct: 99 NVELKAEPDNDEVYAQLTLLPE----------SKPEENGSSEEMPASPPAALARPRVHSF 148
Query: 173 CKTLTASDTSTHGGFSVPRRAAEDCFPPL 201
CKTLTASDTSTHGGFSV RR A++C PPL
Sbjct: 149 CKTLTASDTSTHGGFSVLRRHADECLPPL 177
>gi|357445417|ref|XP_003592986.1| Auxin response factor [Medicago truncatula]
gi|357445443|ref|XP_003592999.1| Auxin response factor [Medicago truncatula]
gi|355482034|gb|AES63237.1| Auxin response factor [Medicago truncatula]
gi|355482047|gb|AES63250.1| Auxin response factor [Medicago truncatula]
Length = 323
Score = 130 bits (327), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/318 (29%), Positives = 150/318 (47%), Gaps = 33/318 (10%)
Query: 55 SSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQ---PQIF 111
S ++ ++W C G +PK + V YFPQGHLE +SSS+ I + DLQ P
Sbjct: 15 SHVHPQIWQTCTGAAVQIPKLHSRVYYFPQGHLEHASSSSSNAYIH--SLDLQRFRPFTI 72
Query: 112 CKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHM 171
C + V LLA+ DEV+ ++ L P + + ++ + D++
Sbjct: 73 CIISAVDLLADPHTDEVFAKLLLTPVTNNSCVQ-DPHEVPNCSNDDD-----VCDEVIDS 126
Query: 172 FCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQ 231
F + L ++ S H F +PR AE+ FPPL + SQ L+ D+HG W+F H+ G
Sbjct: 127 FTRILALTNVSKH-AFYIPRFCAENMFPPLGMEV---SQHLLVTDVHGEVWKFHHVCHGF 182
Query: 232 PRRHLL-TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNS 290
+R++ T+ W+ FV +K L GDAV+F++ G+L +GIRR D+ K++
Sbjct: 183 AKRNVFYTSEWASFVERKKLDVGDAVVFMKNSTGKLFVGIRRK--------DAAEQKKDE 234
Query: 291 YPNVLSVVANAVSTKSMFHVFYSPRATH-ADFVIP---YQKYVKIIMNPICIGTRFKMRF 346
+ F + Y PR DFV+ + +KI NP R +++
Sbjct: 235 LEKAVMEAVKLAEENKPFEIVYYPRGDDWCDFVVDGNIVDESMKIQWNP-----RMRVKM 289
Query: 347 EMDDSPERRCNGVVTGIT 364
+ D S G +T ++
Sbjct: 290 KTDKSSRIPYQGTITTVS 307
>gi|2245394|gb|AAC49752.1| ARF1-binding protein [Arabidopsis thaliana]
gi|20146085|emb|CAD29696.1| putative auxin-induced protein 26 [Arabidopsis thaliana]
gi|20372805|emb|CAD30210.1| putative auxin-induced protein 30 [Arabidopsis thaliana]
Length = 454
Score = 125 bits (314), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 118/223 (52%), Gaps = 15/223 (6%)
Query: 582 PKTVQHHTMPPYASNLQRENVKLNSSSIQMPAIGAEIRKANLLNEHKPVENIPTPTFKAN 641
P T+Q T N + + L ++ M + + + N LN+ + I +P + +
Sbjct: 234 PFTIQEETAKSREGNCRLFGIPLTNN---MNGTDSTMSQKNNLNDAAGLTQIASPKVQ-D 289
Query: 642 MRSHKDGSFNGTAAGCKLFGFSLTSETPTPS---SQSPGKRSCTKVHKQGSLVGRAIDLW 698
+ GS + + G + P P +++ RSCTKVHKQG +GR++DL
Sbjct: 290 LSDQSKGS--KSTNDHREQGRPFQTNNPHPKDAQTKTNSSRSCTKVHKQGIALGRSVDLS 347
Query: 699 RLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHI 758
+ Y +L++EL+ LF G L P K W I+YTD END+M+VGDDPW EFC V KI I
Sbjct: 348 KFQNYEELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFI 407
Query: 759 YTQEEVEKMTIGTTDDTQSCL-DQAPVIMEVSVSKSS-SVSQP 799
YT+EEV KM GT SC ++ V+ E S +K + S S P
Sbjct: 408 YTKEEVRKMNQGTL----SCRSEEEAVVGEGSDAKDAKSASNP 446
>gi|12484201|gb|AAG53999.1|AF336918_1 ARF2 [Arabidopsis thaliana]
gi|225879150|dbj|BAH30645.1| hypothetical protein [Arabidopsis thaliana]
Length = 454
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 118/223 (52%), Gaps = 15/223 (6%)
Query: 582 PKTVQHHTMPPYASNLQRENVKLNSSSIQMPAIGAEIRKANLLNEHKPVENIPTPTFKAN 641
P T+Q T N + + L ++ M + + + N LN+ + I +P + +
Sbjct: 234 PFTIQEETAKSREGNCRLFGIPLTNN---MNGTDSTMSQRNNLNDAAGLTQIASPKVQ-D 289
Query: 642 MRSHKDGSFNGTAAGCKLFGFSLTSETPTPS---SQSPGKRSCTKVHKQGSLVGRAIDLW 698
+ GS + + G + P P +++ RSCTKVHKQG +GR++DL
Sbjct: 290 LSDQSKGS--KSTNDHREQGRPFQTNNPHPKDAQTKTNSSRSCTKVHKQGIALGRSVDLS 347
Query: 699 RLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHI 758
+ Y +L++EL+ LF G L P K W I+YTD END+M+VGDDPW EFC V KI I
Sbjct: 348 KFQNYEELVAELDRLFEFNGELMAPKKDWLIVYTDEENDMMLVGDDPWQEFCCMVRKIFI 407
Query: 759 YTQEEVEKMTIGTTDDTQSCL-DQAPVIMEVSVSKSS-SVSQP 799
YT+EEV KM GT SC ++ V+ E S +K + S S P
Sbjct: 408 YTKEEVRKMNPGTL----SCRSEEEAVVGEGSDAKDAKSASNP 446
>gi|414882153|tpg|DAA59284.1| TPA: hypothetical protein ZEAMMB73_909747 [Zea mays]
Length = 377
Score = 124 bits (312), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/119 (56%), Positives = 79/119 (66%), Gaps = 23/119 (19%)
Query: 166 KSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEW-RF 224
K HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPL++ W RF
Sbjct: 117 KRMSHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLEF------------------WSRF 158
Query: 225 RHIYRGQPRRHLL----TTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNG 279
+ R R +++ TTG S FV++K LVS DAVLFLRG +GELRLG+RR+ Q +NG
Sbjct: 159 KECKRTSMRSYVMAAPQTTGCSAFVNKKKLVSRDAVLFLRGDNGELRLGVRRAAQLKNG 217
>gi|449516481|ref|XP_004165275.1| PREDICTED: auxin response factor 9-like, partial [Cucumis sativus]
Length = 342
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 56/96 (58%), Positives = 74/96 (77%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYT 732
SQS RSCTKVH QG VGRA+DL R N Y+DLL +LE +F++EG L K W+++YT
Sbjct: 211 SQSRQIRSCTKVHMQGIAVGRAVDLTRFNQYDDLLRKLEEMFDIEGELCGSLKKWQVVYT 270
Query: 733 DSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
D E+D+M+VGDDPW+EFC+ V KI IYT EEV++++
Sbjct: 271 DDEDDMMLVGDDPWNEFCSMVRKIFIYTTEEVKRLS 306
>gi|359475629|ref|XP_003631719.1| PREDICTED: auxin response factor 6-like [Vitis vinifera]
Length = 119
Score = 124 bits (310), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 55/76 (72%), Positives = 64/76 (84%)
Query: 164 PTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWR 223
P+K + FCKTL ASDTSTHGGFSVPRRAAE FP LD+ QQ P+QEL+A+DLH EW+
Sbjct: 23 PSKQPSNYFCKTLIASDTSTHGGFSVPRRAAEKVFPSLDFSQQPPAQELIARDLHDNEWK 82
Query: 224 FRHIYRGQPRRHLLTT 239
FRHI+RGQP+RHLLTT
Sbjct: 83 FRHIFRGQPKRHLLTT 98
>gi|218198775|gb|EEC81202.1| hypothetical protein OsI_24228 [Oryza sativa Indica Group]
Length = 627
Score = 122 bits (305), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 161/418 (38%), Gaps = 107/418 (25%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAG + +P + V YFPQGH E P+E P + + C+V V+
Sbjct: 23 QLWHACAGGMVQMPPVSSKVYYFPQGHAEHAQGHG---PVEFPGGRVPALVLCRVAGVRF 79
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
+A+ + DEV+ ++ L+P N + + + + P F KTLT S
Sbjct: 80 MADPDTDEVFAKIRLVPVRA----NEQGYAGDADDGIGAAAAAAAQEEKPASFAKTLTQS 135
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + GG V ++ +LVA
Sbjct: 136 DANNGGGTFVNQK------------------KLVA------------------------- 152
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILS------------- 286
GD+++F+R ++G+L +GIRR+ + G P+ +
Sbjct: 153 -------------GDSIVFMRTENGDLCVGIRRAKKGGVGGPEFLPPPPPPPPPTPAAGG 199
Query: 287 --------------------------KQNSYPNVLSVVANAVSTKSMFHVFYSPRATHAD 320
+ P + AN + F V Y PRA+ +
Sbjct: 200 NYGGFSMFLRGDDDGNKMAAAARGKVRARVRPEEVVEAANLAVSGQPFEVVYYPRASTPE 259
Query: 321 FVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERR-CNGVVTGITDLDPYRWPNSKWRCL 379
F + + G RFKM FE +DS G V+ + DP RWPNS WR L
Sbjct: 260 FCVKAGAVRAAMRTQWFAGMRFKMAFETEDSSRISWFMGTVSAVQVADPIRWPNSPWRLL 319
Query: 380 MVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS-SPRMKKLRTGLQAPPPDYPVSAR 436
V WDE + ++VSPW ++ ++P + + SP KKL L P+ P+ +
Sbjct: 320 QVSWDEPDLLQNVKRVSPWLVELVSNMPAIHLAPFSPPRKKLCVPLY---PELPIDGQ 374
>gi|357489515|ref|XP_003615045.1| Auxin response factor [Medicago truncatula]
gi|355516380|gb|AES98003.1| Auxin response factor [Medicago truncatula]
Length = 239
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 106/209 (50%), Gaps = 12/209 (5%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
++W C G +PK + V YFPQGHL+ V+ + + P I C + V L
Sbjct: 38 KIWQKCVGASVKIPKLHSKVYYFPQGHLKHVSPHTIITLLHC----YPPSISCIISAVDL 93
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
L + DEV+ + LL P ++G E + ++ +++ G + F K LT S
Sbjct: 94 LVDPHTDEVFAK--LLLTPVMDGHGHEQEAPPEVPAEDDDGYNVVS------FVKILTQS 145
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D ++ GF VP + P L PSQ+L D+ G W++ HIYRG+ +RHL +
Sbjct: 146 DCNSGCGFIVPLPCVDLILPKLSLDDPMPSQKLSVTDIQGRIWQYTHIYRGKSKRHLFSR 205
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRL 268
GW+ FV+ K LV+GD+ +F++ L L
Sbjct: 206 GWTSFVNNKKLVAGDSFVFIKNSAWWLML 234
>gi|414586336|tpg|DAA36907.1| TPA: hypothetical protein ZEAMMB73_585430 [Zea mays]
Length = 273
Score = 121 bits (303), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 113/235 (48%), Gaps = 30/235 (12%)
Query: 161 GRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGV 220
G+ + P F K LTASD + FSV A+ FP LDY P Q + +D+HGV
Sbjct: 46 GQQHQQPRPVSFTKVLTASDANNGDVFSVLANCAKAVFPELDYSLGTPKQFVCVRDVHGV 105
Query: 221 EWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGL 280
EW F HI+RG P+RHLLT GW+ FV+ K L GD+V+F+R +D ++ +G+RR+ N L
Sbjct: 106 EWMFCHIWRGSPKRHLLTAGWNNFVNTKKLRFGDSVVFMREEDSKIHVGLRRT----NRL 161
Query: 281 PDSILSKQNSYPNVLSVVANA-VSTKS------------MFHVFYSPRATHADFVIPYQK 327
++ + ++ VST+ F V Y P ++F +
Sbjct: 162 FGAMQGNGGGPAGAVVGPSDGKVSTEDVVAAARLAGAGLWFEVVYYPHVASSEFCV---- 217
Query: 328 YVKIIMNPICIGTRFKMRFEMDDSPERRCN---GVVTGITDLDPYRWPNSKWRCL 379
+ + +M FE ++S + + G + + DP WP S WR L
Sbjct: 218 ------SVAAVKESMQMAFETEESSRVKVSLFMGTIANVEATDPAWWPESPWRLL 266
>gi|194708604|gb|ACF88386.1| unknown [Zea mays]
gi|413920951|gb|AFW60883.1| hypothetical protein ZEAMMB73_247628 [Zea mays]
Length = 379
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 73/99 (73%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYT 732
SQ RSC KVHKQG +GR++DL + NGY +L++EL+ +F+ G L+ +K W ++YT
Sbjct: 240 SQGGSTRSCKKVHKQGMALGRSVDLTKFNGYTELVAELDEMFDFNGELKGCSKEWMVVYT 299
Query: 733 DSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGT 771
D E D+M+VGDDPW+EFC+ V KI +YT+EEV++M G
Sbjct: 300 DYEGDMMLVGDDPWNEFCSMVHKIFVYTREEVQRMNPGA 338
>gi|2262117|gb|AAB63625.1| auxin inducible protein isolog [Arabidopsis thaliana]
Length = 497
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 99/195 (50%), Gaps = 31/195 (15%)
Query: 16 IAFCNGDCGKNNSGCVCYLNSSSSSSSCSANSSSSSSLSSSIYFELWHACAGPLTSLPKK 75
+A +G + + VC+ + + AN +Y ELW CAGPL +P+
Sbjct: 8 LAKASGSSSERDRETVCFGVTDRRFNQLMANRGGEY-----LYDELWKLCAGPLVDVPQA 62
Query: 76 GNVVVYFPQGHLEQVASSSAFPPIEV--PNFDLQPQIFCKVVDVQLLANKENDEVYTQVA 133
V YFPQGH+EQ+ +S+ + P F L P+I C V++V L A K+ DEVY Q+
Sbjct: 63 QERVYYFPQGHMEQLEASTQQVDLNTMKPLFVLPPKILCNVMNVSLQAEKDTDEVYAQIT 122
Query: 134 LLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTP-------HMFCKTLTASDTSTHGG 186
L+P + E VDE SP S P H F K LTASDTSTHGG
Sbjct: 123 LIP------VGTE--------VDE---PMSPDPSPPELQRPKVHSFSKVLTASDTSTHGG 165
Query: 187 FSVPRRAAEDCFPPL 201
FSV R+ A +C PPL
Sbjct: 166 FSVLRKHATECLPPL 180
Score = 112 bits (280), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 71/99 (71%), Gaps = 1/99 (1%)
Query: 672 SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILY 731
S QS RS TKV QG VGRA+DL L GYN+L+ ++E LF+++G LR W I++
Sbjct: 375 SKQSSSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRS-RNQWEIVF 433
Query: 732 TDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIG 770
TD E D+M+VGDDPW EFCN V +I I+++EEV+KMT G
Sbjct: 434 TDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTPG 472
>gi|442751169|gb|JAA67744.1| Putative auxin response factor [Ixodes ricinus]
Length = 155
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 86/147 (58%), Gaps = 12/147 (8%)
Query: 47 SSSSSSLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFD 105
S + + ++Y E W ACAGPL + K G V FPQGH+EQ+ AS++ +P F+
Sbjct: 18 SGQGNGVKDALYEEFWKACAGPLVDVLKVGERVYCFPQGHMEQLEASTNQELNQRIPMFN 77
Query: 106 LQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPT 165
L P+I C+V ++QLLA ++ DEVY Q+ L+P EA Q E + D P
Sbjct: 78 LPPKILCRVFNIQLLAEQDTDEVYAQITLMP---------EADQTEPISPD--SCPEEPP 126
Query: 166 KSTPHMFCKTLTASDTSTHGGFSVPRR 192
K H FCK LTASDTSTHG FSV R+
Sbjct: 127 KPDVHSFCKVLTASDTSTHGEFSVLRK 153
>gi|255635390|gb|ACU18048.1| unknown [Glycine max]
Length = 120
Score = 117 bits (293), Expect = 3e-23, Method: Composition-based stats.
Identities = 58/120 (48%), Positives = 79/120 (65%), Gaps = 2/120 (1%)
Query: 341 RFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEI 400
RF+MRFE +D+ ERRC G++ GI+D+DP RW SKWRCL+VRWD+ I + + +VSPWEI
Sbjct: 2 RFRMRFETEDAAERRCTGLIAGISDVDPVRWLGSKWRCLLVRWDD-IEAARRNRVSPWEI 60
Query: 401 DRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVG 460
+ S S S S +K+ R G+ + ++P + G G DF ES+R KVLQG N G
Sbjct: 61 EPSGSASNSSNLMSAGLKRTRIGMTSVKLEFP-TPDGIGASDFGESLRFRKVLQGLRNFG 119
>gi|326524452|dbj|BAK00609.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 176
Score = 116 bits (290), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 65/149 (43%), Positives = 86/149 (57%), Gaps = 17/149 (11%)
Query: 90 VASSSAFPPIE------VPNF-DLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEG 142
S S PP + +PN+ L Q+ C+V ++ + A+K+ DEVY Q+ L P
Sbjct: 30 TVSRSRLPPTKKTPNSRIPNYPSLPSQLLCQVHNITMHADKDTDEVYAQMMLQP------ 83
Query: 143 LNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLD 202
+N E D+ + G + +K FCK LTASD STHGGFS+PRRAA FP LD
Sbjct: 84 VNSET----DVFPIQSLGSYAKSKHPAEYFCKNLTASDMSTHGGFSMPRRAAGKLFPQLD 139
Query: 203 YKQQRPSQELVAKDLHGVEWRFRHIYRGQ 231
Y Q P+QEL+ +DLH W FRHIYRG+
Sbjct: 140 YSMQPPNQELIVQDLHDNMWIFRHIYRGR 168
>gi|293335341|ref|NP_001168636.1| uncharacterized protein LOC100382422 [Zea mays]
gi|223949733|gb|ACN28950.1| unknown [Zea mays]
gi|414868650|tpg|DAA47207.1| TPA: hypothetical protein ZEAMMB73_931024 [Zea mays]
Length = 446
Score = 115 bits (288), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/363 (27%), Positives = 149/363 (41%), Gaps = 44/363 (12%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
++W ACA P + +P G+ V YFP GH+EQ SA P Q + C V DV L
Sbjct: 21 DVWLACAAPFSRIPTVGDEVYYFPDGHIEQHQHLSAAP------LPAQDRFHCTVTDVSL 74
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPH---MFCKTL 176
+ + DEV+ +++L G +P P F K L
Sbjct: 75 GVDDKTDEVFAKISLR-------PRPGRAAAPPPGPGGSSNSPAPAPGPPQKLRYFTKDL 127
Query: 177 TASDTSTHGGFSVPRRAAEDCFPPLDYK-----QQR-PSQELVAKDLHGVEWRFRHIYRG 230
S T + F +P E P + QQR Q++V +D G WRF YR
Sbjct: 128 --SQTDVYAKFRIPLEN-EHVLPIPKVETDGADQQRVQRQDVVMRDTRGKSWRFSETYRV 184
Query: 231 QP-RRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQN 289
P + H L TGW F K L +GD ++F+R +G+L +G+RR PR Q
Sbjct: 185 NPSKEHSLGTGWLDFAKAKRLAAGDKIVFMRRPNGDLIVGVRRLHVPRY----RPFDFQG 240
Query: 290 SYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMD 349
+V+ V A + + F V Y PR +F++P + + G +M D
Sbjct: 241 PAQDVMEAVRLAAAGRP-FTVTYFPRQAAVEFIVPRSEVDDALATSWEPGAVVRMEVMED 299
Query: 350 DSPERR--CNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLP 407
++ + +G V I + WR L + W V+ W++ SLP
Sbjct: 300 ENRQHTVWVHGRVNAIR--------QNIWRMLEIIWGVDPPLATTRSVNAWQV---ASLP 348
Query: 408 PLS 410
PL+
Sbjct: 349 PLA 351
>gi|326517364|dbj|BAK00049.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 176
Score = 115 bits (287), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 83/149 (55%), Gaps = 17/149 (11%)
Query: 90 VASSSAFPPIE------VPNF-DLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEG 142
S S PP + +PN+ L Q+ C+V ++ + A+K+ DEVY Q+ L P
Sbjct: 30 TVSRSRLPPTKKTPNSRIPNYPSLPSQLLCQVHNITMHADKDTDEVYAQMMLQP------ 83
Query: 143 LNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLD 202
+N E + + P + FCK LTASD STHGGFS+PRRAA FP LD
Sbjct: 84 VNSETNVFPIQSLGSYAKSKHPAE----YFCKNLTASDMSTHGGFSMPRRAAGKLFPQLD 139
Query: 203 YKQQRPSQELVAKDLHGVEWRFRHIYRGQ 231
Y Q P+QEL+ +DLH W FRHIYRG+
Sbjct: 140 YSMQPPNQELIVQDLHDNMWIFRHIYRGR 168
>gi|296086012|emb|CBI31453.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 113 bits (282), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 157/392 (40%), Gaps = 119/392 (30%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
+LWHACAG + +P + VVYFPQGH E A+ ++ N + P + C+V V+
Sbjct: 18 QLWHACAGGMVHMPSLNSRVVYFPQGHAEH-----AYGNVDFGNPRIPPLVLCRVSAVKY 72
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
LA+ E+DE +P K P F KTLT S
Sbjct: 73 LADPESDE-----------------------------------APEK--PASFAKTLTQS 95
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + GG+S ++ ++ LVA D
Sbjct: 96 DANNGGGWS-------------NFVNKK---NLVAGD----------------------- 116
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDS------------ILSK 287
+++FLR ++G+L +GIRR+ + G P+ IL+
Sbjct: 117 ---------------SIVFLRAENGDLCVGIRRAKRAGCG-PEGYSGFLREDENRPILTH 160
Query: 288 QNS--------YPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIG 339
N+ ++ A + F + Y PRA+ +F + + C G
Sbjct: 161 SNAGFRGKGRVRAESVAEAATLAANGQPFVIVYYPRASTPEFCVKASSVRAAMQIQWCPG 220
Query: 340 TRFKMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPW 398
+FKM FE DDS G ++ + DP RWPNS WR L V WDE + ++V+PW
Sbjct: 221 MKFKMAFETDDSSRISWFMGNISSVHVNDPIRWPNSPWRLLQVTWDEPDLLQNVKRVNPW 280
Query: 399 EIDRSVSLPPLSIQS-SPRMKKLRTGLQAPPP 429
++ +P + + SP KKLR Q+ P
Sbjct: 281 LVELVSHVPSIHLSPFSPPRKKLRLQQQSEFP 312
>gi|62321072|dbj|BAD94156.1| auxin response factor 9 [Arabidopsis thaliana]
Length = 313
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 71/99 (71%), Gaps = 1/99 (1%)
Query: 672 SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILY 731
S QS RS TKV QG VGRA+DL L GYN+L+ ++E LF+++G LR W I++
Sbjct: 191 SKQSSSTRSRTKVQMQGVPVGRAVDLNALKGYNELIDDIEKLFDIKGELRS-RNQWEIVF 249
Query: 732 TDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIG 770
TD E D+M+VGDDPW EFCN V +I I+++EEV+KMT G
Sbjct: 250 TDDEGDMMLVGDDPWPEFCNMVKRIFIWSKEEVKKMTPG 288
>gi|158513351|sp|A3BH85.1|ARFT_ORYSJ RecName: Full=Putative auxin response factor 20
Length = 728
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 167/379 (44%), Gaps = 50/379 (13%)
Query: 60 ELWHACAGPLTS-LPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQ 118
++WHACA P + LP G +V Y P GH+EQ A A +P+ + P + C V D+
Sbjct: 22 DVWHACAVPYSGVLPGVGTLVYYIPHGHIEQCAEDPALLLSRLPD-PIHP-VPCTVADLV 79
Query: 119 LLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTA 178
L + E+ E Y ++LLP G + + + E G R F K L+
Sbjct: 80 LDVDAESGEAYATISLLP-----GSHDDTTARRQVPAHGEPGFR--------FFEKQLSP 126
Query: 179 SDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL- 237
+D +++ +P AE PPLD + ++ +DL G + F HI+ + R++L
Sbjct: 127 ADVTSN-ALVLP-AGAEHVLPPLDIAAYQTARLFDVRDLRGKRFEFVHIWDKKRCRYMLG 184
Query: 238 ------TTGWSIFVSQKNLVSGDAVLFLR------GKDGELRLGIRRSVQPRNGLPDSIL 285
GW FV K L + D V+F+R DGEL +G+RR+ + R G
Sbjct: 185 DLGVNDNDGWRGFVKAKRLATRDTVVFMRRGGGDGDGDGELLVGVRRAPRARGGHHPRPG 244
Query: 286 SKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMN---PICIGTRF 342
+ N V+S V A+ + F V Y PR +FV+ +Y+ + P GT
Sbjct: 245 VEDN---KVVSEVWLAMQGVTPFEVTYYPREGTFEFVVSRDEYIGFSFSPFYPFVPGTTV 301
Query: 343 KMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDEC---IGSDHQEQVSPWE 399
+R +P + + + D R WR L V WD+ I QV+ W+
Sbjct: 302 HLRM----NPLQIAQSISGTVRTFDHLR----PWRMLEVDWDQAASPISYRIHRQVNSWQ 353
Query: 400 IDRSVSLPPLSIQSSPRMK 418
+ R P + S+ R++
Sbjct: 354 VLRQPQ--PAATTSAVRIR 370
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 113/256 (44%), Gaps = 43/256 (16%)
Query: 171 MFCKTLTASDTSTHGG-----FSVPR-RAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRF 224
F K L+ SD + +GG F +P+ AAE P + +L +L G W F
Sbjct: 435 FFDKKLSPSDAAANGGGSGALFVIPKPSAAEHVLPRI--------PDLRVTNLQGGRWEF 486
Query: 225 RHIYRGQP--RR---HLLTTGWSIFVSQKNLVSGDAVLFLRGK-DGELRLGIRRSVQPRN 278
H + RR H L GWS FV K L GD V+F+R + GE +G+RR +P
Sbjct: 487 GHTWSDADTDRRSSSHTLAAGWSAFVKAKRLCVGDTVIFMRRRPGGEPLVGVRR--KPHG 544
Query: 279 GLPDSILSKQNSYPNVLSVVANA---VSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP 335
G+P I K VA+A S+ F V Y P A+FV+ ++ P
Sbjct: 545 GMPVGIPDKH---------VADAWLDASSAQPFRVTYCPWQGTAEFVVRREEVEG--SPP 593
Query: 336 ICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDE--CIGSDHQE 393
+ GTR ++ DD+ R V + D+ S+WR L V WD +
Sbjct: 594 LAPGTRVRLLMNPDDARRRSQPPVYGTVRDVH----CRSEWRMLEVDWDRDSPLAPTMNR 649
Query: 394 QVSPWEID-RSVSLPP 408
+V+ W++ ++LPP
Sbjct: 650 RVNSWQVQPVQLALPP 665
>gi|25553609|dbj|BAC24869.1| auxin response factor-like protein [Oryza sativa Japonica Group]
gi|50509188|dbj|BAD30342.1| auxin response factor-like protein [Oryza sativa Japonica Group]
gi|222636556|gb|EEE66688.1| hypothetical protein OsJ_23343 [Oryza sativa Japonica Group]
Length = 752
Score = 112 bits (279), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 106/379 (27%), Positives = 167/379 (44%), Gaps = 50/379 (13%)
Query: 60 ELWHACAGPLTS-LPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQ 118
++WHACA P + LP G +V Y P GH+EQ A A +P+ + P + C V D+
Sbjct: 22 DVWHACAVPYSGVLPGVGTLVYYIPHGHIEQCAEDPALLLSRLPD-PIHP-VPCTVADLV 79
Query: 119 LLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTA 178
L + E+ E Y ++LLP G + + + E G R F K L+
Sbjct: 80 LDVDAESGEAYATISLLP-----GSHDDTTARRQVPAHGEPGFR--------FFEKQLSP 126
Query: 179 SDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLL- 237
+D +++ +P AE PPLD + ++ +DL G + F HI+ + R++L
Sbjct: 127 ADVTSN-ALVLP-AGAEHVLPPLDIAAYQTARLFDVRDLRGKRFEFVHIWDKKRCRYMLG 184
Query: 238 ------TTGWSIFVSQKNLVSGDAVLFLR------GKDGELRLGIRRSVQPRNGLPDSIL 285
GW FV K L + D V+F+R DGEL +G+RR+ + R G
Sbjct: 185 DLGVNDNDGWRGFVKAKRLATRDTVVFMRRGGGDGDGDGELLVGVRRAPRARGGHHPRPG 244
Query: 286 SKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMN---PICIGTRF 342
+ N V+S V A+ + F V Y PR +FV+ +Y+ + P GT
Sbjct: 245 VEDN---KVVSEVWLAMQGVTPFEVTYYPREGTFEFVVSRDEYIGFSFSPFYPFVPGTTV 301
Query: 343 KMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDEC---IGSDHQEQVSPWE 399
+R +P + + + D R WR L V WD+ I QV+ W+
Sbjct: 302 HLRM----NPLQIAQSISGTVRTFDHLR----PWRMLEVDWDQAASPISYRIHRQVNSWQ 353
Query: 400 IDRSVSLPPLSIQSSPRMK 418
+ R P + S+ R++
Sbjct: 354 VLRQPQ--PAATTSAVRIR 370
Score = 72.4 bits (176), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/256 (30%), Positives = 113/256 (44%), Gaps = 43/256 (16%)
Query: 171 MFCKTLTASDTSTHGG-----FSVPR-RAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRF 224
F K L+ SD + +GG F +P+ AAE P + +L +L G W F
Sbjct: 459 FFDKKLSPSDAAANGGGSGALFVIPKPSAAEHVLPRI--------PDLRVTNLQGGRWEF 510
Query: 225 RHIYRGQP--RR---HLLTTGWSIFVSQKNLVSGDAVLFLRGK-DGELRLGIRRSVQPRN 278
H + RR H L GWS FV K L GD V+F+R + GE +G+RR +P
Sbjct: 511 GHTWSDADTDRRSSSHTLAAGWSAFVKAKRLCVGDTVIFMRRRPGGEPLVGVRR--KPHG 568
Query: 279 GLPDSILSKQNSYPNVLSVVANA---VSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNP 335
G+P I K VA+A S+ F V Y P A+FV+ ++ P
Sbjct: 569 GMPVGIPDKH---------VADAWLDASSAQPFRVTYCPWQGTAEFVVRREEVEG--SPP 617
Query: 336 ICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDE--CIGSDHQE 393
+ GTR ++ DD+ R V + D+ S+WR L V WD +
Sbjct: 618 LAPGTRVRLLMNPDDARRRSQPPVYGTVRDVH----CRSEWRMLEVDWDRDSPLAPTMNR 673
Query: 394 QVSPWEID-RSVSLPP 408
+V+ W++ ++LPP
Sbjct: 674 RVNSWQVQPVQLALPP 689
>gi|357489189|ref|XP_003614882.1| Auxin response factor [Medicago truncatula]
gi|355516217|gb|AES97840.1| Auxin response factor [Medicago truncatula]
Length = 377
Score = 109 bits (273), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 151/354 (42%), Gaps = 42/354 (11%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
++W C GP +PK + V YFP+GHLE SS + + + I C V V L
Sbjct: 12 KIWQICVGPDVKIPKIHSKVYYFPRGHLEHACSSPTAATRTILD-RYRSSIPCIVSSVDL 70
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
+ DEV+ ++ L P + E ED ++G + KTLT S
Sbjct: 71 FVDPHTDEVFAKLLLTPVTDQEPPPPVVPGQED----DDGDNLV-------SYVKTLTQS 119
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + VP + FP LD + SQ + DL EWR+ + Y R H T
Sbjct: 120 DCTR--VLCVPIECSNLIFPKLDLDK---SQSITVTDLKNQEWRYTYTYSNSSRLH---T 171
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVV- 298
GW FV +K LV+ D+V+F++ G++ +GIRR+ + D + + + V+
Sbjct: 172 GWLNFVREKKLVANDSVVFIKNSAGKISVGIRRNTK---FTTDEAAEGSENLTDEIKVLD 228
Query: 299 -ANAVSTKSMFHVFYSPRAT-HADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRC 356
A + F V Y P A+ DFV+ K + + + IG + MR ++
Sbjct: 229 AAELAEKNTAFDVVYYPTASGWRDFVVD----AKTVDDAMKIGWKSGMRVKLPLKKYESS 284
Query: 357 NGVVTGITDLD---------PYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
N +T I+ L PN WR L V WD V+PW+++
Sbjct: 285 NSKMT-ISQLKGTISFVFNHSSNVPN--WRILEVNWDGLDIPQIPNLVNPWQVE 335
>gi|218199196|gb|EEC81623.1| hypothetical protein OsI_25146 [Oryza sativa Indica Group]
Length = 796
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 103/351 (29%), Positives = 153/351 (43%), Gaps = 73/351 (20%)
Query: 56 SIYFELWHACAGPLTS-LPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIF-CK 113
SI E+W ACA P + LP G+ V YFP GH +Q S PP +P ++F CK
Sbjct: 403 SITREMWRACAAPKSGRLPAVGSFVYYFPDGHAQQCPSR---PPEPLPG-----RVFLCK 454
Query: 114 VVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSP-TKSTPHMF 172
V V+L A + +E++ ++L+P + + +A + G SP K+T F
Sbjct: 455 VTAVRLDATR--NELFATMSLIPVARDQAIQPQAP--------ADPGPSSPQVKTTLVSF 504
Query: 173 CKTLTASD-TSTHGGFSVPRR-AAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRG 230
K LT +D F VP+R AA P L + P L KD+HG EW + ++
Sbjct: 505 VKPLTCTDAVKNRYRFIVPKREAAMGVLPQLQLNEHVP---LYIKDMHGKEWVINYTWKE 561
Query: 231 QPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKD-GELRLGIRRSVQPRNGLPDSILSKQN 289
H+L++GW F + LV+GD V+F+R D GE +G+RR+++P +
Sbjct: 562 Y--THMLSSGWIKFANANRLVTGDNVVFMRSMDSGERYMGLRRTLKP----------EPV 609
Query: 290 SYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMD 349
S V+ V A + F V Y R +FV+P
Sbjct: 610 SVDEVIEAVWRAARLEP-FEVAYLSRQDGDEFVVPL------------------------ 644
Query: 350 DSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEI 400
P G V I + + S WR + V W C G + V+ W+I
Sbjct: 645 --PNVGPQGKVIAIEN-----YATSIWRMIQVEWPSCAGMNR--YVNFWQI 686
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 150/361 (41%), Gaps = 53/361 (14%)
Query: 61 LWHACAGPLTS-LPKKGNVVVYFPQGHLEQVASSSA--FPPIEVPNFDLQPQIF-CKVVD 116
+W ACA P + LP G++V YF GH EQ A + VP P++F C V
Sbjct: 20 MWLACAAPNSGRLPAVGSMVFYFVDGHAEQFCQFPAPLLEQLAVPG----PRVFLCTVAA 75
Query: 117 VQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTL 176
V+L A+ +E Y + L P + + L + F KTL
Sbjct: 76 VRLRADALTNEAYADITLDPVADHDVPRLLPAPAPAAAAGG-------QQQQLRYFVKTL 128
Query: 177 TASDTSTHGGFSVPRRAAEDCFPPL-DYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
+SD F+VP A+D FPPL D K +P L+ KDL G F + G R
Sbjct: 129 MSSDAEYRDRFAVPMDVAKDVFPPLVDAKAVQP---LIVKDLQGSPMTFDYGRNGN--RV 183
Query: 236 LLTTGWSIFVSQKNLVSGDAVLFLRGK-DGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
L W F + V GD+V+F+R + D EL +G+RR + L + ++++ P
Sbjct: 184 TLAKVWKKFRDDMDFVDGDSVIFMRRRDDDELYVGVRR----QRTLDKPLRTRRSRPPTP 239
Query: 295 LSVVANAV-------STKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFE 347
L V V + F Y R +FV+P + ++ + + +RF E
Sbjct: 240 LPVAVQEVIAAAGRAAAGEQFTATYRSRQDGDEFVVPRE----VVEEGLRLRSRFTPEME 295
Query: 348 MD--------DSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWE 399
++ P +G +T I D W WR + + W GS+ + + W+
Sbjct: 296 VEFVWALEDGAPPSVGPHGKITAIHDTT---W---MWRSVEIGWTG--GSEMNKYANFWQ 347
Query: 400 I 400
+
Sbjct: 348 V 348
>gi|359497444|ref|XP_003635519.1| PREDICTED: auxin response factor 6-like [Vitis vinifera]
Length = 109
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 55/66 (83%)
Query: 164 PTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWR 223
P+K + FCKTL ASDTSTHGGFSVPRRAAE FPPLD+ QQ P+QEL+A+DLH EW+
Sbjct: 23 PSKQPSNYFCKTLIASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWK 82
Query: 224 FRHIYR 229
FRHI+R
Sbjct: 83 FRHIFR 88
>gi|357489363|ref|XP_003614969.1| Auxin response factor [Medicago truncatula]
gi|355516304|gb|AES97927.1| Auxin response factor [Medicago truncatula]
Length = 377
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/380 (27%), Positives = 162/380 (42%), Gaps = 39/380 (10%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
++W CAGP +PK + V YFP+GHLE SS + + + I C V V L
Sbjct: 12 KIWQICAGPDVKIPKIHSKVYYFPRGHLEHACSSPTAATRTILD-RYRSSIPCIVSSVDL 70
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
+ DEV+ ++ L P + E E D++G + KTLT S
Sbjct: 71 FVDPHTDEVFAKLLLTPVTDQEPPPPVVPGQE----DDDGDNLV-------SYVKTLTQS 119
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTT 239
D + VP + FP LD + SQ + DL E + + Y R H T
Sbjct: 120 DCTR--VLCVPIECSNLIFPKLDLDK---SQSITVTDLKNQERGYTYTYSNSSRLH---T 171
Query: 240 GWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVA 299
GW FV +K LV+ D+V+F++ G++ +GIRR + D VL A
Sbjct: 172 GWLNFVREKKLVANDSVVFIKNSAGKISVGIRRKTKFTTDEADEGSENLTDEIKVLD-AA 230
Query: 300 NAVSTKSMFHVFYSPRAT-HADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRCNG 358
+ F V Y P A+ DFV+ K + + + IG + MR ++ N
Sbjct: 231 ELAEKNTAFDVVYYPTASGWRDFVVD----AKTVDDAMKIGWKSGMRVKLPLKKYESSNS 286
Query: 359 VVTGITDLD---PYRWPNS----KWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSI 411
+T I+ L + + +S WR L V WD + V+PW+++ ++P S
Sbjct: 287 KMT-ISQLKGTISFVYNHSSNVPNWRMLEVNWDGLDIPQNPNLVNPWQVE-VYNIPAPST 344
Query: 412 QSS----PRMKKLRTGLQAP 427
SS PR+ + + Q P
Sbjct: 345 SSSTVNNPRLAESSSPQQIP 364
>gi|110739728|dbj|BAF01771.1| auxin response factor-like protein [Arabidopsis thaliana]
Length = 194
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 61/145 (42%), Positives = 80/145 (55%), Gaps = 32/145 (22%)
Query: 653 TAAGCKLFGFSLTSETP----------------------TPSSQSPGK-----RSCTKVH 685
T +LFGF LTS +P TP+S S K RS TKV
Sbjct: 28 TNCSYRLFGFDLTSNSPAPIPQDKQPMDTCGAAKCQEPITPTSMSEQKKQQTSRSRTKVQ 87
Query: 686 KQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEG--LLRDPAKGWRILYTDSENDVMVVGD 743
QG VGRA+DL L Y++L+ ELE +F ++G L RD W +++TD E D+M+ GD
Sbjct: 88 MQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLLARD---KWIVVFTDDEGDMMLAGD 144
Query: 744 DPWHEFCNEVSKIHIYTQEEVEKMT 768
DPW+EFC KI IY+ +EV+KMT
Sbjct: 145 DPWNEFCKMAKKIFIYSSDEVKKMT 169
>gi|407232674|gb|AFT82679.1| ARF32 ARF type transcription factor, partial [Zea mays subsp. mays]
gi|414868651|tpg|DAA47208.1| TPA: hypothetical protein ZEAMMB73_035171 [Zea mays]
Length = 418
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 139/330 (42%), Gaps = 31/330 (9%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
++W ACA P + +P G+ V YFP GH+EQ S++ P Q + C V DV L
Sbjct: 62 DVWLACAAPFSRIPTVGDEVDYFPDGHIEQHLSAAPQP------LPAQHRFHCTVTDVSL 115
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
+ + DEV+ +++L P+P + F K L S
Sbjct: 116 GVDDKTDEVFAKISLRPRPGRAAAPPPGPGGSSNSPAPSPPQKL------RYFTKEL--S 167
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQP-RRHLLT 238
T + F +P P+ Q++V +D G WRF Y P ++H LT
Sbjct: 168 QTDVYARFRIPLDNEHVLPIPMVDTDGVQRQDVVMRDTSGKSWRFSKTYSVNPSKQHSLT 227
Query: 239 TGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGL-----PDSILSKQNSYPN 293
TGW F K L +GD ++F+R +G+L +G+RR PR L PD Q +
Sbjct: 228 TGWLDFAKAKRLAAGDKIVFMRRPNGDLIVGVRRLDVPRYPLFDFQGPDPDQPAQ----D 283
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
V+ V A + + F V Y PR +F++P + + G +M M+D
Sbjct: 284 VMEAVRLAAAGRP-FTVTYFPRQAAVEFIVPRSEVDDALATSWEPGALVRMEV-MEDENR 341
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRW 383
+ VV + + + WR L + W
Sbjct: 342 QYTMWVVGRVEAIR-----QNIWRMLEIIW 366
>gi|212274925|ref|NP_001130477.1| uncharacterized protein LOC100191575 [Zea mays]
gi|194689238|gb|ACF78703.1| unknown [Zea mays]
Length = 430
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 139/330 (42%), Gaps = 31/330 (9%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
++W ACA P + +P G+ V YFP GH+EQ S++ P Q + C V DV L
Sbjct: 62 DVWLACAAPFSRIPTVGDEVDYFPDGHIEQHLSAAPQP------LPAQHRFHCTVTDVSL 115
Query: 120 LANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTAS 179
+ + DEV+ +++L P+P + F K L S
Sbjct: 116 GVDDKTDEVFAKISLRPRPGRAAAPPPGPGGSSNSPAPSPPQKL------RYFTKEL--S 167
Query: 180 DTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQP-RRHLLT 238
T + F +P P+ Q++V +D G WRF Y P ++H LT
Sbjct: 168 QTDVYARFRIPLDNEHVLPIPMVDTDGVQRQDVVMRDTSGKSWRFSKTYSVNPSKQHSLT 227
Query: 239 TGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGL-----PDSILSKQNSYPN 293
TGW F K L +GD ++F+R +G+L +G+RR PR L PD Q +
Sbjct: 228 TGWLDFAKAKRLAAGDKIVFMRRPNGDLIVGVRRLDVPRYPLFDFQGPDPDQPAQ----D 283
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
V+ V A + + F V Y PR +F++P + + G +M M+D
Sbjct: 284 VMEAVRLAAAGRP-FTVTYFPRQAAVEFIVPRSEVDDALATSWEPGALVRMEV-MEDENR 341
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRW 383
+ VV + + + WR L + W
Sbjct: 342 QYTMWVVGRVEAIR-----QNIWRMLEIIW 366
>gi|414884426|tpg|DAA60440.1| TPA: hypothetical protein ZEAMMB73_638933 [Zea mays]
Length = 496
Score = 103 bits (257), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 58/149 (38%), Positives = 91/149 (61%), Gaps = 8/149 (5%)
Query: 256 VLFLRGKD--GELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYS 313
+L LR ++ +L LGIR + +P+ +P +LS + + +L+ VA+A +T S F +F++
Sbjct: 15 ILMLRNRNEKNQLLLGIRHASRPQTVMPSYVLSSDSMHIELLAAVAHAAATNSRFTIFFN 74
Query: 314 PRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWP 372
PRA+ +FVIP KY+K I + I +G RF+M FE ++S RR G +T ++D DP RWP
Sbjct: 75 PRASPTEFVIPLSKYIKAIFHTRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWP 134
Query: 373 NSKWRCLMVRWD-----ECIGSDHQEQVS 396
+S WR + V C G +Q+ VS
Sbjct: 135 SSYWRSVKVAMAPNDKYLCTGGSNQKVVS 163
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/127 (40%), Positives = 83/127 (65%), Gaps = 3/127 (2%)
Query: 256 VLFLRGKD--GELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYS 313
+L LR ++ +L LGIR + +P+ +P +LS + + +L+ VA+A +T S F +F++
Sbjct: 219 ILMLRNRNEKNQLLLGIRHASRPQTVMPSYVLSSDSMHIELLAAVAHAAATNSRFTIFFN 278
Query: 314 PRATHADFVIPYQKYVKIIMNP-ICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWP 372
PRA+ +FVIP KY+K I + I +G RF+M FE ++S RR G +T ++D DP RWP
Sbjct: 279 PRASPTEFVIPLSKYIKAIFHTRISVGMRFRMLFETEESSVRRYMGTITEVSDADPVRWP 338
Query: 373 NSKWRCL 379
+S WR +
Sbjct: 339 SSYWRSV 345
>gi|218199195|gb|EEC81622.1| hypothetical protein OsI_25144 [Oryza sativa Indica Group]
Length = 722
Score = 103 bits (256), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 167/386 (43%), Gaps = 57/386 (14%)
Query: 60 ELWHACAGPLTS-LPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQ 118
++WHACA P + LP G +V Y P GH+EQ A A +P+ + P + C V D+
Sbjct: 22 DVWHACAVPYSGVLPGVGTLVYYIPHGHIEQCAEDPALLLSRLPD-PIHP-VPCTVADLV 79
Query: 119 LLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTA 178
L + E+ E Y ++LLP G + + + E G R F K L+
Sbjct: 80 LDVDAESGEAYATISLLP-----GSHDDTTARRQVPAHGEPGFR--------FFEKQLSP 126
Query: 179 SDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRH-----IYRGQPR 233
+D +++ +P AE PPLD + ++ +DL G + F H I+ +
Sbjct: 127 ADVTSN-ALVLP-AGAEHVLPPLDIAAYQTARLFDVRDLRGKRFEFVHIWDKNIWDKKRC 184
Query: 234 RHLL-------TTGWSIFVSQKNLVSGDAVLFLR--------GKDGELRLGIRRSVQPRN 278
R++L GW FV K L + D V+F+R DGEL +G+RR+ + R
Sbjct: 185 RYMLGDLGVNDNDGWRGFVKAKRLATRDTVVFMRRGGGGGDGDGDGELLVGVRRAPRARG 244
Query: 279 GLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMN---P 335
G + N V+S V + + F V Y PR +FV+ +Y+ + P
Sbjct: 245 GHHPRPGVEDN---KVVSEVWLEMQGVTPFEVTYYPREGTFEFVVSRDEYIGFSFSPFYP 301
Query: 336 ICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDEC---IGSDHQ 392
GT +R +P + + + D R WR L V WD+ I +
Sbjct: 302 FVPGTTVHLRM----NPLQIAQSISGTVRTFDHLR----PWRMLEVDWDQAASPISYRIR 353
Query: 393 EQVSPWEIDRSVSLPPLSIQSSPRMK 418
QV+ W++ R P + S+ R++
Sbjct: 354 RQVNSWQVLRQPQ--PAATTSAVRIR 377
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 107/253 (42%), Gaps = 50/253 (19%)
Query: 171 MFCKTLTASDTSTHGG-----FSVPR-RAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRF 224
F K L+ SD + +GG F +P+ AAE P + +L +L G W F
Sbjct: 442 FFDKKLSPSDAAANGGGSGALFVIPKPSAAEHVLPRI--------PDLRVTNLQGGRWEF 493
Query: 225 RHIYRGQP--RR---HLLTTGWSIFVSQKNLVSGDAVLFLRGK-DGELRLGIRRSVQPRN 278
H + RR H L GWS FV K L GD V+F+R + GE +G+RR +P
Sbjct: 494 GHTWSDADTDRRSSSHTLAAGWSAFVKAKRLCVGDTVIFMRRRPGGEPIVGVRR--KPHG 551
Query: 279 GLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICI 338
G+ I K +V +AV T A+FV+ ++ P+
Sbjct: 552 GMLVGIPDK-----HVADAWLDAVGT--------------AEFVVRREEVEG--SPPLAP 590
Query: 339 GTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDE--CIGSDHQEQVS 396
GTR ++ DD R V + D+ SKWR L V WD + +V+
Sbjct: 591 GTRVRLLMNPDDVRRRSQPPVYGTVRDVH----SRSKWRMLEVDWDRDSPLAPTMNRRVN 646
Query: 397 PWEID-RSVSLPP 408
W++ ++LPP
Sbjct: 647 SWQVQPVQLALPP 659
>gi|301793227|emb|CBA12004.1| putative auxin response factor 5/7, partial [Gnetum gnemon]
Length = 881
Score = 102 bits (255), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
Query: 312 YSPRATHADFVIPYQKYVKIIM-NPICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYR 370
Y+PR + ++FV+P KY K + IG RF+M FE ++S RR G +TGI+DLDP R
Sbjct: 2 YNPRTSPSEFVVPLAKYNKAFYGTQVSIGMRFRMMFETEESSVRRYMGTITGISDLDPVR 61
Query: 371 WPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
WPNS+WR L V WDE D Q +VS WEI+
Sbjct: 62 WPNSQWRNLQVGWDESGAGDKQNRVSIWEIE 92
Score = 94.4 bits (233), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 67/101 (66%), Gaps = 2/101 (1%)
Query: 669 PTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GW 727
PT +P R+ TKV+K G+ VGR+ID+ R Y +L EL +F +EG L DP K GW
Sbjct: 761 PTYQQPAPPMRTYTKVYKLGN-VGRSIDVTRYKNYGELRHELARMFGLEGQLEDPKKTGW 819
Query: 728 RILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMT 768
++++ D END+++VGDDPW EF + V I I + +EV +M+
Sbjct: 820 QLVFVDHENDILLVGDDPWEEFVSCVRYIKILSPQEVLQMS 860
>gi|20146083|emb|CAD29695.1| early auxin-induced protein 22 [Arabidopsis thaliana]
Length = 278
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 69/98 (70%), Gaps = 2/98 (2%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDP-AKGWRILY 731
+Q+ R+ TKV K+GS VGR+ID+ R +GY++L +L +F +EG L DP W+++Y
Sbjct: 144 NQTQRMRTYTKVQKRGS-VGRSIDVTRYSGYDELRHDLARMFGIEGQLEDPLTSDWKLVY 202
Query: 732 TDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
TD END+++VGDDPW EF N V I I + EV++M++
Sbjct: 203 TDHENDILLVGDDPWEEFVNCVQNIKILSSVEVQQMSL 240
>gi|294460143|gb|ADE75654.1| unknown [Picea sitchensis]
gi|294464227|gb|ADE77628.1| unknown [Picea sitchensis]
Length = 96
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 43/77 (55%), Positives = 57/77 (74%)
Query: 713 LFNMEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGTT 772
+FN+EG L +P+KGW+++YTD+E D+M+VGDDPW EFC+ V KI IYT+EEVEKMT
Sbjct: 1 MFNIEGELGNPSKGWQVVYTDNEGDMMLVGDDPWQEFCSIVRKIFIYTREEVEKMTPQKH 60
Query: 773 DDTQSCLDQAPVIMEVS 789
Q C D+ P+ E S
Sbjct: 61 AKLQGCSDEQPITRETS 77
>gi|302808953|ref|XP_002986170.1| hypothetical protein SELMODRAFT_425183 [Selaginella moellendorffii]
gi|300146029|gb|EFJ12701.1| hypothetical protein SELMODRAFT_425183 [Selaginella moellendorffii]
Length = 283
Score = 97.1 bits (240), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/171 (37%), Positives = 84/171 (49%), Gaps = 48/171 (28%)
Query: 61 LWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQLL 120
LW C GPL +LP G+ VVYFPQG+ EQV +S+ + +FD+ L
Sbjct: 17 LWLECPGPLITLPAIGSQVVYFPQGYTEQVVASTQ----KEADFDIPIS--------HLH 64
Query: 121 ANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASD 180
A++ENDEV+ Q+ L P + L L D G+ TK T F +TLT
Sbjct: 65 ADQENDEVFAQMTLQPFSQTADPFL----LPDFGIQ--------TKQTIVSFSRTLT--- 109
Query: 181 TSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQ 231
D+ Q P+QELVA+DLH +EWRFRHIYRG+
Sbjct: 110 ---------------------DFTQTPPAQELVARDLHNIEWRFRHIYRGR 139
>gi|2618731|gb|AAB84358.1| IAA21 [Arabidopsis thaliana]
Length = 381
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 67/98 (68%), Gaps = 2/98 (2%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDP-AKGWRILY 731
+Q+ R+ TKV K+GS VGR+ID+ R GY++L +L +F +EG L DP W+++Y
Sbjct: 248 AQTQRMRTYTKVQKRGS-VGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVY 306
Query: 732 TDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
D END+++VGDDPW EF N V I I + EV++M++
Sbjct: 307 VDHENDILLVGDDPWEEFVNCVQSIKILSSAEVQQMSL 344
>gi|304308173|gb|ADL70399.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 192
Score = 95.5 bits (236), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 67/138 (48%), Gaps = 34/138 (24%)
Query: 654 AAGCKLFGFSLTSE---------------------------------TPTPSSQSPGKRS 680
+ C+LFGF LTS+ +P Q RS
Sbjct: 56 TSSCRLFGFDLTSKPASATIPHDKQLISVDSNISDSTTKCQDPNSSNSPKEQKQQTSTRS 115
Query: 681 CTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMV 740
KV QG+ VGRA+DL L Y++L+ ELE +F +EG L P W I++TD E D M+
Sbjct: 116 RIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGELS-PKDKWAIVFTDDEGDRML 174
Query: 741 VGDDPWHEFCNEVSKIHI 758
VGDDPW+EFC K+ I
Sbjct: 175 VGDDPWNEFCKMAKKLFI 192
>gi|327493279|gb|AEA86346.1| auxin response factor [Solanum nigrum]
Length = 139
Score = 95.1 bits (235), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/124 (45%), Positives = 77/124 (62%), Gaps = 11/124 (8%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ VVYFPQGH EQVA+S+ +PN+ L PQ+ C++ ++
Sbjct: 25 ELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPGLPPQLICQLHNL 84
Query: 118 QLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLT 177
+ A+ E DEVY Q+ L P L ++ +D+ + G P+K + FCKTLT
Sbjct: 85 TMHADVETDEVYAQMTLQP--------LSPQEQKDVCLLPAELGI-PSKQPTNYFCKTLT 135
Query: 178 ASDT 181
ASDT
Sbjct: 136 ASDT 139
>gi|326499245|dbj|BAK06113.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 467
Score = 94.0 bits (232), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 78/132 (59%), Gaps = 5/132 (3%)
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
VL+ ++A+ T S+F V+Y PR + + +++ KY +G RF+M FE +D P
Sbjct: 3 VLASASHAIKTNSIFVVYYRPRLSQSQYIVSVNKYHLASKTGFTVGMRFRMNFEAEDVPV 62
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIG-SDHQEQVSPWEIDRS-VSLPPLS- 410
++ G + G D P +W S+W+ L V+WD+ + + E+VSPWEID S VS P +S
Sbjct: 63 KKFFGTIVGDGDFSP-QWSGSEWKSLKVQWDDSVAICNGPERVSPWEIDSSDVSSPAIST 121
Query: 411 -IQSSPRMKKLR 421
+QSS + K+ R
Sbjct: 122 LLQSSAKNKRPR 133
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 58/96 (60%), Gaps = 4/96 (4%)
Query: 672 SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILY 731
S QS R+ KV G+ VGRA+DL L+GY L +ELE +F ++D + +++ +
Sbjct: 356 SQQSSIGRNRVKVQMHGNAVGRAVDLASLDGYERLTNELEQMFE----IKDIKQNFKVAF 411
Query: 732 TDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
D+E D M VGDDPW EFC V KI IY E+ + M
Sbjct: 412 NDNEGDTMKVGDDPWMEFCRMVRKIVIYPIEDDKNM 447
>gi|75152495|sp|Q8H506.1|Y7833_ORYSJ RecName: Full=B3 domain-containing protein
Os07g0183300/Os07g0183600
gi|25553611|dbj|BAC24871.1| putative auxin response factor 6a [Oryza sativa Japonica Group]
gi|50509190|dbj|BAD30344.1| putative auxin response factor 6a [Oryza sativa Japonica Group]
Length = 762
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 97/361 (26%), Positives = 150/361 (41%), Gaps = 53/361 (14%)
Query: 61 LWHACAGPLTS-LPKKGNVVVYFPQGHLEQVASSSA--FPPIEVPNFDLQPQIF-CKVVD 116
+W ACA P + LP G++V YF GH EQ A + VP P++F C V
Sbjct: 20 MWLACAAPNSGRLPAVGSMVFYFVDGHAEQFCQFPAPLLEQLAVPG----PRVFLCTVAA 75
Query: 117 VQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTL 176
V+L A+ +E Y + L P + + L + F KTL
Sbjct: 76 VRLRADALTNEAYADITLDPVADHDVPRLLPAP-------APAAAAGGQQQQLRYFVKTL 128
Query: 177 TASDTSTHGGFSVPRRAAEDCFPPL-DYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
+SD F+VP A+D FPPL D K +P L+ KDL G F + G R
Sbjct: 129 MSSDAEYRDRFAVPMDVAKDVFPPLVDAKAVQP---LIVKDLQGSPMTFDYGRNGN--RV 183
Query: 236 LLTTGWSIFVSQKNLVSGDAVLFLRGK-DGELRLGIRRSVQPRNGLPDSILSKQNSYPNV 294
L W F + V GD+V+F+R + D EL +G+RR + L + ++++ P
Sbjct: 184 TLAKVWKKFRDDMDFVDGDSVIFMRRRDDDELYVGVRR----QRTLDKPLRTRRSRPPTP 239
Query: 295 LSVVANAV-------STKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFE 347
L V V + F Y R +FV+P + ++ + + +RF E
Sbjct: 240 LPVAVQEVIAAAGRAAAGEQFTATYRSRQDGDEFVVPRE----VVEEGLRLRSRFTPEME 295
Query: 348 MD--------DSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWE 399
++ P +G +T I D W WR + + W GS+ + + W+
Sbjct: 296 VEFVWALEDGAPPSVGPHGKITAIHDTT---W---MWRSVEIGWTG--GSEMNKYANFWQ 347
Query: 400 I 400
+
Sbjct: 348 V 348
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 129/298 (43%), Gaps = 41/298 (13%)
Query: 110 IFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSP-TKST 168
CKV V+L A + +E++ ++L+P + + +A + G SP ++T
Sbjct: 389 FLCKVTAVRLDATR--NELFATMSLIPVARDQAIQPQAP--------ADPGPSSPQVQTT 438
Query: 169 PHMFCKTLTASD-TSTHGGFSVPRR-AAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRH 226
F K LT +D F VP+R A P L + P L KD+HG EW +
Sbjct: 439 LVSFVKPLTCTDAVKNRYRFIVPKRETAMGVLPQLQLNEHVP---LYIKDMHGKEWVINY 495
Query: 227 IYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKD-GELRLGIRRSVQPRNGLPDSIL 285
++ H+L++GW F + LV+GD V+F+R D GE +G+RR+++P
Sbjct: 496 TWKEY--THMLSSGWIKFANANRLVTGDNVVFMRSMDSGERYMGLRRTLKP--------- 544
Query: 286 SKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIP---YQKYVKIIMNPICIGTRF 342
+ S V+ V A + F V Y R +FV+P ++ P + F
Sbjct: 545 -EPVSVDEVIEAVWRAARLEP-FEVTYLSRQDGDEFVVPCGIVHNALRAKFTPGMV-VNF 601
Query: 343 KMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEI 400
E D P G V I + + S WR + V W C G + V+ W+I
Sbjct: 602 VWAVEEDRLPNVGPQGKVIAIEN-----YATSIWRMIQVEWPSCAGMNR--YVNFWQI 652
>gi|297738134|emb|CBI27335.3| unnamed protein product [Vitis vinifera]
Length = 163
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 76/124 (61%), Gaps = 13/124 (10%)
Query: 650 FNGTAAGC-----KLFGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYN 704
F G+ GC +L + + PTPS R+ KV+K GS VGR++D+ R + Y+
Sbjct: 8 FQGSLFGCVQDPSELLQNAGQVDPPTPS------RTFVKVYKSGS-VGRSLDITRFSSYH 60
Query: 705 DLLSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEE 763
+L EL +F +EG L +P + GW++++ D ENDV+++GDDPW F N V I I + E+
Sbjct: 61 ELREELGQMFGIEGKLENPLRSGWQLVFVDRENDVLLLGDDPWEAFVNNVWYIKILSPED 120
Query: 764 VEKM 767
V+KM
Sbjct: 121 VQKM 124
>gi|1711205|gb|AAB92474.1| IAA23 [Arabidopsis thaliana]
Length = 591
Score = 93.6 bits (231), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/88 (47%), Positives = 61/88 (69%), Gaps = 2/88 (2%)
Query: 683 KVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDP-AKGWRILYTDSENDVMVV 741
KV K+GS VGR+ID+ R GY++L +L +F +EG L DP W+++Y D END+++V
Sbjct: 483 KVQKRGS-VGRSIDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHENDILLV 541
Query: 742 GDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
GDDPW EF N V I I + EV++M++
Sbjct: 542 GDDPWEEFVNCVQSIKILSSAEVQQMSL 569
>gi|224085429|ref|XP_002307573.1| predicted protein [Populus trichocarpa]
gi|222857022|gb|EEE94569.1| predicted protein [Populus trichocarpa]
Length = 137
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 62/90 (68%), Gaps = 2/90 (2%)
Query: 676 PGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDS 734
P R+ KVHK GS GR++D+ + + Y++L SEL LF +EGLL DP + GW++++ D
Sbjct: 49 PSTRTFVKVHKSGS-YGRSLDISKFSSYDELRSELARLFCLEGLLEDPQRSGWQLVFGDR 107
Query: 735 ENDVMVVGDDPWHEFCNEVSKIHIYTQEEV 764
ENDV+++GDDPW EF N V I I + EV
Sbjct: 108 ENDVLLLGDDPWQEFVNNVWYIKILSPLEV 137
>gi|239983815|sp|A3BH91.1|Y7838_ORYSJ RecName: Full=B3 domain-containing protein Os07g0183700
gi|125599354|gb|EAZ38930.1| hypothetical protein OsJ_23349 [Oryza sativa Japonica Group]
Length = 524
Score = 92.8 bits (229), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 133/288 (46%), Gaps = 35/288 (12%)
Query: 40 SSSCSANSSSSSSLSSSIYFELWHACAGPLTS-LPKKGNVVVYFPQGHLEQVASSSAFPP 98
++ +++S+ + + + ++W ACA P + LP G++V YFP GH EQ S
Sbjct: 219 ATPTTSSSAQFQTQAQQVTRDMWMACAAPKSGRLPTVGSLVYYFPDGHAEQCLSR----- 273
Query: 99 IEVPNFDLQPQIF-CKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDE 157
P L +IF CKV DV+L A N+ + T ++L+P + A QL+ +
Sbjct: 274 ---PQEPLPGRIFLCKVTDVRLGAAATNEALAT-ISLVPI----AADDHAFQLQAPADPD 325
Query: 158 EGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRR-AAEDCFPPLDYKQQRPSQELVAKD 216
+S + + F K LT +D T F VP+ AA P + P L KD
Sbjct: 326 PAPAQSQSLVS---FVKPLTYTDV-TKNRFMVPKDDAAAGVLPHIQLNDDVP---LRIKD 378
Query: 217 LHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQP 276
L G EW F + ++ R + GW F + LV+GD +F+R +GE+ + +RR+
Sbjct: 379 LSGKEWAFNYTWKAHTR--MFRNGWMEFSNANGLVTGDNAVFMRRGNGEMFMAVRRT--- 433
Query: 277 RNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIP 324
RN S V+ V A + + F V Y R +FV+P
Sbjct: 434 RN------RPAPFSVEEVIEAVWRA-ARREPFEVSYCLRQDGDEFVVP 474
>gi|125557472|gb|EAZ03008.1| hypothetical protein OsI_25149 [Oryza sativa Indica Group]
Length = 541
Score = 92.8 bits (229), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 133/288 (46%), Gaps = 35/288 (12%)
Query: 40 SSSCSANSSSSSSLSSSIYFELWHACAGPLTS-LPKKGNVVVYFPQGHLEQVASSSAFPP 98
++ +++S+ + + + ++W ACA P + LP G++V YFP GH EQ S
Sbjct: 236 ATPTTSSSAQFQTQAQQVTRDMWMACAAPKSGRLPTVGSLVYYFPDGHAEQCLSR----- 290
Query: 99 IEVPNFDLQPQIF-CKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDE 157
P L +IF CKV DV+L A N+ + T ++L+P + A QL+ +
Sbjct: 291 ---PQEPLPGRIFLCKVTDVRLGAAATNEALAT-ISLVPI----AADDHAFQLQAPADPD 342
Query: 158 EGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRR-AAEDCFPPLDYKQQRPSQELVAKD 216
+S + + F K LT +D T F VP+ AA P + P L KD
Sbjct: 343 PAPAQSQSLVS---FVKPLTYTDV-TKNRFMVPKDDAAAGVLPHIQLNDDVP---LRIKD 395
Query: 217 LHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQP 276
L G EW F + ++ R + GW F + LV+GD +F+R +GE+ + +RR+
Sbjct: 396 LSGKEWAFNYTWKAHTR--MFRNGWMEFSNANGLVTGDNAVFMRRGNGEMFMAVRRT--- 450
Query: 277 RNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIP 324
RN S V+ V A + + F V Y R +FV+P
Sbjct: 451 RN------RPAPFSVEEVIEAVWRA-ARREPFEVSYCSRQDGDEFVVP 491
>gi|298112255|gb|ADB96374.2| auxin response factor 11 [Arabidopsis thaliana]
Length = 185
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 64/130 (49%), Gaps = 34/130 (26%)
Query: 654 AAGCKLFGFSLTSE---------------------------------TPTPSSQSPGKRS 680
+ C+LFGF LTS+ +P Q RS
Sbjct: 56 TSSCRLFGFDLTSKPASATIPHDKQLISVDSNISDSTTKCQDPNSSNSPKEQKQQTSTRS 115
Query: 681 CTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMV 740
KV QG+ VGRA+DL L Y++L+ ELE +F +EG L P W I++TD E D M+
Sbjct: 116 RIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGELS-PKDKWAIVFTDDEGDRML 174
Query: 741 VGDDPWHEFC 750
VGDDPW+EFC
Sbjct: 175 VGDDPWNEFC 184
>gi|304308169|gb|ADL70397.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 188
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 64/130 (49%), Gaps = 34/130 (26%)
Query: 654 AAGCKLFGFSLTSE---------------------------------TPTPSSQSPGKRS 680
+ C+LFGF LTS+ +P Q RS
Sbjct: 56 TSSCRLFGFDLTSKPASATIPHDKQLISVDSNISDSTTKCQDPNSSNSPKEQKQQTSTRS 115
Query: 681 CTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMV 740
KV QG+ VGRA+DL L Y++L+ ELE +F +EG L P W I++TD E D M+
Sbjct: 116 RIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGELS-PKDKWAIVFTDDEGDRML 174
Query: 741 VGDDPWHEFC 750
VGDDPW+EFC
Sbjct: 175 VGDDPWNEFC 184
>gi|304308163|gb|ADL70394.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 188
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 64/130 (49%), Gaps = 34/130 (26%)
Query: 654 AAGCKLFGFSLTSE---------------------------------TPTPSSQSPGKRS 680
+ C+LFGF LTS+ +P Q RS
Sbjct: 56 TSSCRLFGFDLTSKPASATIPHDKQLISVDSNISDSTTKCQDPNSSNSPKEQKQQTSTRS 115
Query: 681 CTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMV 740
KV QG+ VGRA+DL L Y++L+ ELE +F +EG L P W I++TD E D M+
Sbjct: 116 RIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGELS-PKDKWAIVFTDDEGDRML 174
Query: 741 VGDDPWHEFC 750
VGDDPW+EFC
Sbjct: 175 VGDDPWNEFC 184
>gi|25553616|dbj|BAC24876.1| auxin response factor 10-like protein [Oryza sativa Japonica Group]
gi|50509194|dbj|BAD30348.1| auxin response factor 10-like protein [Oryza sativa Japonica Group]
Length = 585
Score = 92.4 bits (228), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 133/288 (46%), Gaps = 35/288 (12%)
Query: 40 SSSCSANSSSSSSLSSSIYFELWHACAGPLTS-LPKKGNVVVYFPQGHLEQVASSSAFPP 98
++ +++S+ + + + ++W ACA P + LP G++V YFP GH EQ S
Sbjct: 259 ATPTTSSSAQFQTQAQQVTRDMWMACAAPKSGRLPTVGSLVYYFPDGHAEQCLSR----- 313
Query: 99 IEVPNFDLQPQIF-CKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDE 157
P L +IF CKV DV+L A N+ + T ++L+P + A QL+ +
Sbjct: 314 ---PQEPLPGRIFLCKVTDVRLGAAATNEALAT-ISLVPI----AADDHAFQLQAPADPD 365
Query: 158 EGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRR-AAEDCFPPLDYKQQRPSQELVAKD 216
+S + + F K LT +D T F VP+ AA P + P L KD
Sbjct: 366 PAPAQSQSLVS---FVKPLTYTDV-TKNRFMVPKDDAAAGVLPHIQLNDDVP---LRIKD 418
Query: 217 LHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQP 276
L G EW F + ++ R + GW F + LV+GD +F+R +GE+ + +RR+
Sbjct: 419 LSGKEWAFNYTWKAHTR--MFRNGWMEFSNANGLVTGDNAVFMRRGNGEMFMAVRRT--- 473
Query: 277 RNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIP 324
RN S V+ V A + + F V Y R +FV+P
Sbjct: 474 RN------RPAPFSVEEVIEAVWRA-ARREPFEVSYCLRQDGDEFVVP 514
>gi|304308179|gb|ADL70402.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 187
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 64/130 (49%), Gaps = 34/130 (26%)
Query: 654 AAGCKLFGFSLTSE---------------------------------TPTPSSQSPGKRS 680
+ C+LFGF LTS+ +P Q RS
Sbjct: 56 TSSCRLFGFDLTSKPASATIPHDKQLISVDSNISDSTTKCQDPNSSNSPKEQKQQTSTRS 115
Query: 681 CTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMV 740
KV QG+ VGRA+DL L Y++L+ ELE +F +EG L P W I++TD E D M+
Sbjct: 116 RIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGELS-PKDKWAIVFTDDEGDRML 174
Query: 741 VGDDPWHEFC 750
VGDDPW+EFC
Sbjct: 175 VGDDPWNEFC 184
>gi|304308157|gb|ADL70391.1| auxin response factor 11 [Arabidopsis thaliana]
gi|304308165|gb|ADL70395.1| auxin response factor 11 [Arabidopsis thaliana]
gi|304308167|gb|ADL70396.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 185
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 64/130 (49%), Gaps = 34/130 (26%)
Query: 654 AAGCKLFGFSLTSE---------------------------------TPTPSSQSPGKRS 680
+ C+LFGF LTS+ +P Q RS
Sbjct: 56 TSSCRLFGFDLTSKPASATIPHDKQLISVDSNISDSTTKCQDPNSSNSPKEQKQQTSTRS 115
Query: 681 CTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMV 740
KV QG+ VGRA+DL L Y++L+ ELE +F +EG L P W I++TD E D M+
Sbjct: 116 RIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGELS-PKDKWAIVFTDDEGDRML 174
Query: 741 VGDDPWHEFC 750
VGDDPW+EFC
Sbjct: 175 VGDDPWNEFC 184
>gi|224062579|ref|XP_002300855.1| predicted protein [Populus trichocarpa]
gi|222842581|gb|EEE80128.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 63/93 (67%), Gaps = 2/93 (2%)
Query: 676 PGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDS 734
P R+ KVHK GS GR++D+ + + Y++L SEL LF +EG L D + GW++++ D
Sbjct: 45 PSTRTFVKVHKSGSY-GRSLDISKFSSYDELRSELARLFCLEGQLEDRQRSGWQLVFVDR 103
Query: 735 ENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
ENDV+++GDDPW EF N V I I + EV++M
Sbjct: 104 ENDVLLLGDDPWQEFVNNVWYIKILSPLEVQQM 136
>gi|5714686|gb|AAD48035.1|AF169204_1 differentially expressed osmotic protein ODE2 [Capsicum annuum]
Length = 67
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/66 (69%), Positives = 53/66 (80%), Gaps = 2/66 (3%)
Query: 744 DPWHEFCNEVSKIHIYTQEEVEKMTI-GTTDDTQSCLDQAPVIMEVSVSKSSSVSQPDSS 802
DPWHEFC VSKIHIYTQEEVEKMTI G +DDT SCL++AP + VSKSSS+ QPDSS
Sbjct: 3 DPWHEFCEVVSKIHIYTQEEVEKMTIQGISDDTHSCLEEAPAAT-MDVSKSSSIGQPDSS 61
Query: 803 PTVVRV 808
T +R+
Sbjct: 62 LTTIRI 67
>gi|293336069|ref|NP_001170351.1| uncharacterized protein LOC100384328 [Zea mays]
gi|224035287|gb|ACN36719.1| unknown [Zea mays]
Length = 326
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Query: 676 PGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDS 734
P R+ KV+K GS VGR++D+ R + Y +L EL +F ++G L DP + GW++++ D
Sbjct: 224 PTTRTFVKVYKSGS-VGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDR 282
Query: 735 ENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
ENDV+++GDDPW F N V I I + E+V KM
Sbjct: 283 ENDVLLLGDDPWESFVNSVWYIKILSPEDVHKM 315
>gi|413920950|gb|AFW60882.1| hypothetical protein ZEAMMB73_247628 [Zea mays]
Length = 314
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 54/74 (72%)
Query: 673 SQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYT 732
SQ RSC KVHKQG +GR++DL + NGY +L++EL+ +F+ G L+ +K W ++YT
Sbjct: 240 SQGGSTRSCKKVHKQGMALGRSVDLTKFNGYTELVAELDEMFDFNGELKGCSKEWMVVYT 299
Query: 733 DSENDVMVVGDDPW 746
D E D+M+VGDDPW
Sbjct: 300 DYEGDMMLVGDDPW 313
>gi|118488187|gb|ABK95913.1| unknown [Populus trichocarpa]
Length = 533
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/188 (34%), Positives = 99/188 (52%), Gaps = 20/188 (10%)
Query: 589 TMPPYASNLQRENVKLNSSSIQMPAI-GAEIRKANLLNEHKPVENIPTPTFKANMRSH-- 645
T P +++ EN SS Q P + GA I + LL V T + A++ S
Sbjct: 336 TYPEKDPSMEAENC---SSDAQNPTLFGANIDSSGLLLPTT-VPRYSTSSIDADVSSMPL 391
Query: 646 KDGSFNGTAAGC-----KLFGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRL 700
D F + GC +L + + PTPS + KV+K GS VGR++D+ R
Sbjct: 392 GDSGFQNSLYGCVQDSSELLSNAGQMDPPTPSG------TFVKVYKSGS-VGRSLDISRF 444
Query: 701 NGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIY 759
+ Y++L EL +F +EG L +P + GW++++ D ENDV+++GDDPW F N V I I
Sbjct: 445 SSYHELRGELAQMFGIEGKLENPHRSGWQLVFVDRENDVLLLGDDPWELFVNNVWYIKIL 504
Query: 760 TQEEVEKM 767
+ E+V K+
Sbjct: 505 SPEDVLKL 512
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 44/67 (65%)
Query: 341 RFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEI 400
RF+M FE ++S RR G +TGI+DLDP RWPNS WR + V WDE + Q +VS WEI
Sbjct: 2 RFRMLFETEESSVRRYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEI 61
Query: 401 DRSVSLP 407
+ + P
Sbjct: 62 EPLTTFP 68
>gi|413934439|gb|AFW68990.1| hypothetical protein ZEAMMB73_088581 [Zea mays]
Length = 510
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 61/87 (70%), Gaps = 2/87 (2%)
Query: 682 TKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMV 740
KV+K G+ GR++D+ R + Y++L EL LF +EG L DP + GW++++ D E DV++
Sbjct: 380 VKVYKSGT-YGRSLDITRFSSYHELRRELGRLFGLEGQLEDPLRSGWQLVFVDREEDVLL 438
Query: 741 VGDDPWHEFCNEVSKIHIYTQEEVEKM 767
VGDDPW EF + VS I I + +EV++M
Sbjct: 439 VGDDPWQEFVSTVSCIKILSPQEVQQM 465
>gi|168061668|ref|XP_001782809.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665711|gb|EDQ52386.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 100
Score = 90.1 bits (222), Expect = 4e-15, Method: Composition-based stats.
Identities = 41/87 (47%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
Query: 684 VHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGD 743
V++QG VGR IDL + Y+ L L +LFN++G L D KGW+++YTD ENDV++VGD
Sbjct: 1 VYQQGK-VGRTIDLRKCESYDGLRRVLANLFNLQGQLDDVTKGWQLVYTDHENDVLLVGD 59
Query: 744 DPWHEFCNEVSKIHIYTQEEVEKMTIG 770
DPW EFC V + I + ++ T+G
Sbjct: 60 DPWEEFCGCVRSLKILSPQDAAGQTVG 86
>gi|361069823|gb|AEW09223.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171017|gb|AFG68785.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171018|gb|AFG68786.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171019|gb|AFG68787.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171020|gb|AFG68788.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171021|gb|AFG68789.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171022|gb|AFG68790.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171023|gb|AFG68791.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171024|gb|AFG68792.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171025|gb|AFG68793.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171026|gb|AFG68794.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171027|gb|AFG68795.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171028|gb|AFG68796.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171029|gb|AFG68797.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171030|gb|AFG68798.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171031|gb|AFG68799.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
gi|383171032|gb|AFG68800.1| Pinus taeda anonymous locus UMN_717_01 genomic sequence
Length = 89
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 62/87 (71%), Gaps = 3/87 (3%)
Query: 34 LNSSSSSSSCSANSSSSSSLS-SSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVAS 92
LNS S+ NSS +LS SSI ELWHACAGPL SLP+KG +VVYFPQGHLEQ +
Sbjct: 5 LNSPDEYSNGRLNSSEELALSKSSICMELWHACAGPLISLPRKGTLVVYFPQGHLEQ--A 62
Query: 93 SSAFPPIEVPNFDLQPQIFCKVVDVQL 119
S++ ++ ++L PQIFC+V++V L
Sbjct: 63 STSLKQQQMRPYELPPQIFCRVLNVNL 89
>gi|297598571|ref|NP_001045857.2| Os02g0141100 [Oryza sativa Japonica Group]
gi|255670593|dbj|BAF07771.2| Os02g0141100, partial [Oryza sativa Japonica Group]
Length = 304
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 66/92 (71%), Gaps = 2/92 (2%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSEND 737
R+ TKV+K+G+ VGR+ID+ R +GY +L L +F +EG L D + GW+++Y D E+D
Sbjct: 171 RTFTKVYKRGA-VGRSIDIGRYSGYEELKHALARMFGIEGQLEDRQRIGWKLVYKDHEDD 229
Query: 738 VMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTI 769
++++GDDPW EF N V I I + +EV++M++
Sbjct: 230 ILLLGDDPWEEFVNCVRCIRILSPQEVQQMSL 261
>gi|224103213|ref|XP_002334077.1| predicted protein [Populus trichocarpa]
gi|222869513|gb|EEF06644.1| predicted protein [Populus trichocarpa]
Length = 163
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 65/94 (69%), Gaps = 2/94 (2%)
Query: 675 SPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTD 733
+P R+ KV+K GS GR++D+ + + YN+L SEL +F +EG L DP + GW++++ D
Sbjct: 23 NPPSRTFVKVYKSGSF-GRSLDITKFSNYNELRSELAFMFGLEGQLEDPLRSGWQLVFID 81
Query: 734 SENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
ENDV+++GD PW EF N V I I + +EV++M
Sbjct: 82 RENDVLLLGDGPWPEFVNSVWCIKILSPQEVQQM 115
>gi|297740767|emb|CBI30949.3| unnamed protein product [Vitis vinifera]
Length = 160
Score = 89.4 bits (220), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 65/94 (69%), Gaps = 2/94 (2%)
Query: 675 SPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTD 733
+P R+ KV+K GS GR++D+ + + Y++L EL +F +EG L DP + GW++++ D
Sbjct: 23 NPPTRTFVKVYKSGSF-GRSLDITKFSSYHELRGELARMFGLEGQLEDPRRSGWQLVFVD 81
Query: 734 SENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
ENDV+++GDDPW EF N V I I + +EV++M
Sbjct: 82 RENDVLLLGDDPWPEFVNSVWCIKILSLQEVQQM 115
>gi|115470909|ref|NP_001059053.1| Os07g0183200 [Oryza sativa Japonica Group]
gi|75152496|sp|Q8H507.1|Y7832_ORYSJ RecName: Full=B3 domain-containing protein Os07g0183200
gi|25553610|dbj|BAC24870.1| putative auxin response factor 6a [Oryza sativa Japonica Group]
gi|50509189|dbj|BAD30343.1| putative auxin response factor 6a [Oryza sativa Japonica Group]
gi|113610589|dbj|BAF20967.1| Os07g0183200 [Oryza sativa Japonica Group]
Length = 407
Score = 89.4 bits (220), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 103/375 (27%), Positives = 150/375 (40%), Gaps = 53/375 (14%)
Query: 60 ELWHACAGPLTS-LPKKGNVVVYFPQGHLEQVASSSA--FPPIEVPNFDLQPQIF-CKVV 115
++W ACA P + LP G+VV YF GH Q A + VP P++F C V
Sbjct: 19 DMWLACAAPNSGRLPAVGSVVFYFVDGHAAQFCQFPAPLLEQLAVPG----PRVFLCTVA 74
Query: 116 DVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKT 175
V+L A+ +E Y ++ L P + + L G F KT
Sbjct: 75 AVRLRADALTNEAYAEITLDPVADHDVPRLAPAPAPAPAAAAGG-------QQLRYFVKT 127
Query: 176 LTASDTSTHGGFSVPRRAAEDCFPPL-DYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRR 234
L SD FS P A+ FPPL D K +P L+ KDLHG F + +G +R
Sbjct: 128 LMISDFDFRIRFSAPMADAKGVFPPLVDAKAVQP---LLVKDLHGSPMTFDYGRKG--KR 182
Query: 235 HLLTTGWSIFVSQKNLVSGDAVLFL-----RGKDGELRLGIRRSVQPRNGLPDSILSKQN 289
L W F + V GD+V+F+ DGEL +G+RR L +++ +
Sbjct: 183 VTLAKVWKKFRDDMDFVDGDSVIFMRRRDDDDDDGELYVGVRRQRTLERPLRNTMRRYRP 242
Query: 290 SYPNVLSV------VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFK 343
P +V A + F V Y R +FV+P + + + + +
Sbjct: 243 PTPPQAAVQEAVLAAAGHAAAGERFTVAYRSRKDGDEFVVPREAVEEGLRARLTSLAEVE 302
Query: 344 MRFEMDD------SPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWD---ECIGSDHQEQ 394
+ ++D P + + TG WR L + WD E S + Q
Sbjct: 303 FVWAVEDGAPPIVGPRGKVTAIATG-----------QLWRNLEIVWDGNSEMDMSANFWQ 351
Query: 395 VSPW-EIDRSVSLPP 408
V P E+D S S PP
Sbjct: 352 VRPVEEVDISPSTPP 366
>gi|326487181|dbj|BAJ89575.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 449
Score = 89.0 bits (219), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 61/93 (65%), Gaps = 2/93 (2%)
Query: 676 PGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDS 734
P R+ KV+K GS VGR++D+ R + Y +L EL +F + G L DP + GW++++ D
Sbjct: 347 PTSRTFVKVYKSGS-VGRSLDITRFSNYAELREELGQMFGIRGQLDDPDRSGWQLVFVDR 405
Query: 735 ENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
ENDV+++GDDPW F N V I I + E+V K+
Sbjct: 406 ENDVLLLGDDPWESFVNSVWYIKILSPEDVHKL 438
>gi|284811273|gb|ADB96375.1| auxin response factor 11 [Arabidopsis thaliana]
gi|284811275|gb|ADB96376.1| auxin response factor 11 [Arabidopsis thaliana]
gi|284811277|gb|ADB96377.1| auxin response factor 11 [Arabidopsis thaliana]
gi|304308159|gb|ADL70392.1| auxin response factor 11 [Arabidopsis thaliana]
gi|304308161|gb|ADL70393.1| auxin response factor 11 [Arabidopsis thaliana]
gi|304308175|gb|ADL70400.1| auxin response factor 11 [Arabidopsis thaliana]
gi|304308181|gb|ADL70403.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 183
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 63/129 (48%), Gaps = 34/129 (26%)
Query: 654 AAGCKLFGFSLTSE---------------------------------TPTPSSQSPGKRS 680
+ C+LFGF LTS+ +P Q RS
Sbjct: 56 TSSCRLFGFDLTSKPASATIPHDKQLISVDSNISDSTTKCQDPNSSNSPKEQKQQTSTRS 115
Query: 681 CTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMV 740
KV QG+ VGRA+DL L Y++L+ ELE +F +EG L P W I++TD E D M+
Sbjct: 116 RIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGELS-PKDKWAIVFTDDEGDRML 174
Query: 741 VGDDPWHEF 749
VGDDPW+EF
Sbjct: 175 VGDDPWNEF 183
>gi|125557468|gb|EAZ03004.1| hypothetical protein OsI_25145 [Oryza sativa Indica Group]
Length = 407
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 103/374 (27%), Positives = 149/374 (39%), Gaps = 53/374 (14%)
Query: 61 LWHACAGPLTS-LPKKGNVVVYFPQGHLEQVASSSA--FPPIEVPNFDLQPQIF-CKVVD 116
+W ACA P + LP G+VV YF GH Q A + VP P++F C V
Sbjct: 20 MWLACAAPNSGRLPAVGSVVFYFVDGHAAQFCQFPAPLLEQLAVPG----PRVFLCTVAA 75
Query: 117 VQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTL 176
V+L A+ +E Y ++ L P + + L G F KTL
Sbjct: 76 VRLRADALTNEAYAEITLDPVADHDVPRLAPAPAPAPAAAAGG-------QQLRYFVKTL 128
Query: 177 TASDTSTHGGFSVPRRAAEDCFPPL-DYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRH 235
SD FS P A+ FPPL D K +P L+ KDLHG F + +G +R
Sbjct: 129 MISDFDFRIRFSAPMADAKGVFPPLVDAKAVQP---LLVKDLHGSPMTFDYGRKG--KRV 183
Query: 236 LLTTGWSIFVSQKNLVSGDAVLFL-----RGKDGELRLGIRRSVQPRNGLPDSILSKQNS 290
L W F + V GD+V+F+ DGEL +G+RR L +++ +
Sbjct: 184 TLAKVWKKFRDDMDFVDGDSVIFMRRRDDDDDDGELYVGVRRQRTLERPLRNTMRRYRPP 243
Query: 291 YPNVLSV------VANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKM 344
P +V A + F V Y R +FV+P + + + + +
Sbjct: 244 TPPQAAVQEAVLAAAGHAAAGERFTVAYRSRQDGDEFVVPREAVEEGLRARLTSLAEVEF 303
Query: 345 RFEMDD------SPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWD---ECIGSDHQEQV 395
+ ++D P + + TG WR L + WD E S + QV
Sbjct: 304 VWAVEDGAPPIVGPRGKVTAIATG-----------QLWRNLEIVWDGNSEMDMSANFWQV 352
Query: 396 SPW-EIDRSVSLPP 408
P E+D S S PP
Sbjct: 353 RPVEEVDISPSTPP 366
>gi|357491401|ref|XP_003615988.1| Auxin response factor [Medicago truncatula]
gi|355517323|gb|AES98946.1| Auxin response factor [Medicago truncatula]
Length = 170
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 101/201 (50%), Gaps = 45/201 (22%)
Query: 143 LNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLD 202
+ L+ +Q E E G +P+K + FCKTLTAS V + DC +
Sbjct: 1 MRLQQEQKEAYLPAELG---TPSKQPTNYFCKTLTASQ--------VTQALTGDCLCLVG 49
Query: 203 YKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFL--- 259
R + + RHLLTTGWS+FVS K LV+GD+V+F
Sbjct: 50 --------------------RLKKCFL---LRHLLTTGWSVFVSAKILVAGDSVMFTWQC 86
Query: 260 ----RGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPR 315
R + +L GIR ++ P+ +P S+LS + + +L+ VA+A +T S F +FY+PR
Sbjct: 87 IFFNRNEKNQLLFGIRHAIWPQTVMPSSVLSTDSLHLGLLAAVAHAAATNSPFTIFYNPR 146
Query: 316 ATHADFVIP----YQKYVKII 332
A ++FVIP +YVK++
Sbjct: 147 ACPSEFVIPSLSIMLEYVKVV 167
>gi|149390661|gb|ABR25348.1| auxin responsive protein [Oryza sativa Indica Group]
Length = 209
Score = 88.2 bits (217), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 80/128 (62%), Gaps = 3/128 (2%)
Query: 647 DGSFNGTAAGCKLFGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDL 706
D +FN + GF S P P++ R+ TKV+K+G+ VGR+ID+ + +GY++L
Sbjct: 44 DMAFNSIDSTINDGGFLNRSSWP-PAAPLKRMRTFTKVYKRGA-VGRSIDMSQFSGYDEL 101
Query: 707 LSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVE 765
L +F++EG L + + GW+++Y D E+D++++GDDPW EF V I I + +EV+
Sbjct: 102 KHALARMFSIEGQLEERQRIGWKLVYKDHEDDILLLGDDPWEEFVGCVKCIRILSPQEVQ 161
Query: 766 KMTIGTTD 773
+M++ D
Sbjct: 162 QMSLEGCD 169
>gi|293332071|ref|NP_001169029.1| uncharacterized protein LOC100382863 [Zea mays]
gi|223974533|gb|ACN31454.1| unknown [Zea mays]
Length = 122
Score = 87.4 bits (215), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Query: 676 PGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDS 734
P R+ KV+K GS VGR++D+ R + Y +L EL +F ++G L DP + GW++++ D
Sbjct: 20 PTTRTFVKVYKSGS-VGRSLDITRFSNYAELREELGQMFGIKGQLDDPDRSGWQLVFVDR 78
Query: 735 ENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
ENDV+++GDDPW F N V I I + E+V KM
Sbjct: 79 ENDVLLLGDDPWESFVNSVWYIKILSPEDVHKM 111
>gi|170677526|gb|ACB30835.1| ARF6, partial [Arabidopsis thaliana]
gi|170677528|gb|ACB30836.1| ARF6, partial [Arabidopsis thaliana]
gi|170677530|gb|ACB30837.1| ARF6, partial [Arabidopsis thaliana]
gi|170677532|gb|ACB30838.1| ARF6, partial [Arabidopsis thaliana]
gi|170677534|gb|ACB30839.1| ARF6, partial [Arabidopsis thaliana]
gi|170677536|gb|ACB30840.1| ARF6, partial [Arabidopsis thaliana]
gi|170677538|gb|ACB30841.1| ARF6, partial [Arabidopsis thaliana]
gi|170677540|gb|ACB30842.1| ARF6, partial [Arabidopsis thaliana]
gi|170677542|gb|ACB30843.1| ARF6, partial [Arabidopsis thaliana]
gi|170677544|gb|ACB30844.1| ARF6, partial [Arabidopsis thaliana]
gi|170677546|gb|ACB30845.1| ARF6, partial [Arabidopsis thaliana]
gi|170677548|gb|ACB30846.1| ARF6, partial [Arabidopsis thaliana]
gi|170677550|gb|ACB30847.1| ARF6, partial [Arabidopsis thaliana]
gi|170677552|gb|ACB30848.1| ARF6, partial [Arabidopsis thaliana]
gi|170677554|gb|ACB30849.1| ARF6, partial [Arabidopsis thaliana]
gi|170677556|gb|ACB30850.1| ARF6, partial [Arabidopsis thaliana]
gi|170677560|gb|ACB30852.1| ARF6, partial [Arabidopsis thaliana]
gi|170677562|gb|ACB30853.1| ARF6, partial [Arabidopsis thaliana]
gi|170677564|gb|ACB30854.1| ARF6, partial [Arabidopsis thaliana]
gi|170677566|gb|ACB30855.1| ARF6, partial [Arabidopsis thaliana]
gi|170677568|gb|ACB30856.1| ARF6, partial [Arabidopsis thaliana]
gi|170677570|gb|ACB30857.1| ARF6, partial [Arabidopsis thaliana]
gi|170677572|gb|ACB30858.1| ARF6, partial [Arabidopsis thaliana]
Length = 113
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 64/93 (68%), Gaps = 2/93 (2%)
Query: 676 PGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDS 734
P + KV+K GS GR++D+ + + Y++L SEL +F +EG L DP + GW++++ D
Sbjct: 1 PQSNTFVKVYKSGSF-GRSLDISKFSSYHELRSELARMFGLEGQLEDPVRSGWQLVFVDR 59
Query: 735 ENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
ENDV+++GDDPW EF + V I I + +EV++M
Sbjct: 60 ENDVLLLGDDPWPEFVSSVWCIKILSPQEVQQM 92
>gi|168053340|ref|XP_001779095.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669547|gb|EDQ56132.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 825
Score = 87.0 bits (214), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 58/86 (67%), Gaps = 2/86 (2%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDV 738
RS KV+K GS+ RA+D+ R Y +L EL +FN++G L DP GW++++TD+E+D+
Sbjct: 717 RSYIKVYKLGSIT-RAVDVNRFKDYTELRCELARMFNLDGQL-DPTVGWQLVFTDNEDDL 774
Query: 739 MVVGDDPWHEFCNEVSKIHIYTQEEV 764
++VGDDPW EF V I I T EV
Sbjct: 775 LLVGDDPWDEFVRNVRGIRILTPAEV 800
>gi|168037231|ref|XP_001771108.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677641|gb|EDQ64109.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 160
Score = 86.3 bits (212), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 68/108 (62%), Gaps = 6/108 (5%)
Query: 678 KRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDP-AKGWRILYTDSEN 736
+R+ TKVHK GS VGR++D+ N Y +L EL +F+++ L+ DP GW+I++ D+EN
Sbjct: 29 QRTFTKVHKLGS-VGRSLDVRIFNTYAELRKELAKMFHLDCLMEDPPTSGWQIVFVDNEN 87
Query: 737 DVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGTTDDTQSCLDQAPV 784
D +++GDDPW +F N V I I + EV ++ + D L+ PV
Sbjct: 88 DTLLLGDDPWEDFLNCVRSIKILSPSEVTQI----SQDQLKMLETVPV 131
>gi|302761230|ref|XP_002964037.1| hypothetical protein SELMODRAFT_28604 [Selaginella moellendorffii]
gi|300167766|gb|EFJ34370.1| hypothetical protein SELMODRAFT_28604 [Selaginella moellendorffii]
Length = 113
Score = 86.3 bits (212), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 62/93 (66%), Gaps = 2/93 (2%)
Query: 672 SSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILY 731
S++ P R+ TKV+K GS +GRA+D+ R + Y +L EL +FN++G L D GW++++
Sbjct: 23 SNKQPPTRTYTKVYKLGS-IGRAVDVTRFSNYTELRWELARMFNLDGQL-DQKSGWQLVF 80
Query: 732 TDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEV 764
D E D+++VGDDPW EF + V I I + EV
Sbjct: 81 IDHEGDILLVGDDPWEEFVSSVRGIRILSPSEV 113
>gi|170677558|gb|ACB30851.1| ARF6, partial [Arabidopsis thaliana]
Length = 113
Score = 85.5 bits (210), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 64/93 (68%), Gaps = 2/93 (2%)
Query: 676 PGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDS 734
P + KV+K GS GR++D+ + + Y++L SEL +F +EG L +P + GW++++ D
Sbjct: 1 PQSNTFVKVYKSGSF-GRSLDISKFSSYHELRSELARMFGLEGQLENPVRSGWQLVFVDR 59
Query: 735 ENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
ENDV+++GDDPW EF + V I I + +EV++M
Sbjct: 60 ENDVLLLGDDPWPEFVSSVWCIKILSPQEVQQM 92
>gi|218197101|gb|EEC79528.1| hypothetical protein OsI_20622 [Oryza sativa Indica Group]
Length = 380
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 65/191 (34%), Positives = 88/191 (46%), Gaps = 17/191 (8%)
Query: 340 TRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWE 399
+ F MR +M ++ GI+++DP +WP S+W+CL+VRWD+ S HQ +VSPWE
Sbjct: 3 SEFAMRVKM----------LMRGISEVDPIKWPGSRWKCLLVRWDDSTDSSHQNRVSPWE 52
Query: 400 IDRSVSLPPLSIQSSPRMKKLRTGLQAPPP--DYPVSARGGGVLDFEESVRSSKVLQGQE 457
I+R +S+ S RT L P D P G G D + +VLQGQE
Sbjct: 53 IERVGG--SVSVTHSLSSGSKRTKLHFPQGSLDTPF-LNGNGHPDSMGTENFHRVLQGQE 109
Query: 458 NVGFVSPLYGCDTVNHPLGFEMRAPAHQSLALNGIRKDNINELVRALPTSY--TGFVESN 515
G S C F+ S + G R +Y GF ES
Sbjct: 110 FRGSRSHGVVCSESPGVPNFQSPDSRRFSADMRGYMMPESGPPQRNTEFTYQPIGFSESL 169
Query: 516 RFPKVLQGQEI 526
FP+VLQGQE+
Sbjct: 170 GFPEVLQGQEM 180
>gi|222636558|gb|EEE66690.1| hypothetical protein OsJ_23346 [Oryza sativa Japonica Group]
Length = 721
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 129/298 (43%), Gaps = 41/298 (13%)
Query: 110 IFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSP-TKST 168
CKV V+L A + +E++ ++L+P + + +A + G SP ++T
Sbjct: 348 FLCKVTAVRLDATR--NELFATMSLIPVARDQAIQPQAPA--------DPGPSSPQVQTT 397
Query: 169 PHMFCKTLTASD-TSTHGGFSVPRR-AAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRH 226
F K LT +D F VP+R A P L + P L KD+HG EW +
Sbjct: 398 LVSFVKPLTCTDAVKNRYRFIVPKRETAMGVLPQLQLNEHVP---LYIKDMHGKEWVINY 454
Query: 227 IYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKD-GELRLGIRRSVQPRNGLPDSIL 285
++ H+L++GW F + LV+GD V+F+R D GE +G+RR+++P
Sbjct: 455 TWKEY--THMLSSGWIKFANANRLVTGDNVVFMRSMDSGERYMGLRRTLKP--------- 503
Query: 286 SKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIP---YQKYVKIIMNPICIGTRF 342
+ S V+ V A + F V Y R +FV+P ++ P + F
Sbjct: 504 -EPVSVDEVIEAVWRAARLEP-FEVTYLSRQDGDEFVVPCGIVHNALRAKFTPGMV-VNF 560
Query: 343 KMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEI 400
E D P G V I + + S WR + V W C G + V+ W+I
Sbjct: 561 VWAVEEDRLPNVGPQGKVIAIEN-----YATSIWRMIQVEWPSCAGMNR--YVNFWQI 611
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 136/337 (40%), Gaps = 59/337 (17%)
Query: 82 FPQGHLEQVASSSAFPPIEVPNFDLQPQIF-CKVVDVQLLANKENDEVYTQVALLPQPEL 140
FP LEQ+A VP P++F C V V+L A+ +E Y + L P +
Sbjct: 13 FPAPLLEQLA---------VPG----PRVFLCTVAAVRLRADALTNEAYADITLDPVADH 59
Query: 141 EGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPP 200
+ L + F KTL +SD F+VP A+D FPP
Sbjct: 60 DVPRLLPAPAPAAAAGG-------QQQQLRYFVKTLMSSDAEYRDRFAVPMDVAKDVFPP 112
Query: 201 L-DYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFL 259
L D K +P L+ KDL G F + G R L W F + V GD+V+F+
Sbjct: 113 LVDAKAVQP---LIVKDLQGSPMTFDYGRNGN--RVTLAKVWKKFRDDMDFVDGDSVIFM 167
Query: 260 RGK-DGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVANAV-------STKSMFHVF 311
R + D EL +G+RR + L + ++++ P L V V + F
Sbjct: 168 RRRDDDELYVGVRR----QRTLDKPLRTRRSRPPTPLPVAVQEVIAAAGRAAAGEQFTAT 223
Query: 312 YSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMD--------DSPERRCNGVVTGI 363
Y R +FV+P + ++ + + +RF E++ P +G +T I
Sbjct: 224 YRSRQDGDEFVVPRE----VVEEGLRLRSRFTPEMEVEFVWALEDGAPPSVGPHGKITAI 279
Query: 364 TDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEI 400
D W WR + + W GS+ + + W++
Sbjct: 280 HDTT---W---MWRSVEIGWTG--GSEMNKYANFWQV 308
>gi|85069285|gb|ABC69714.1| ARF2-like protein [Nicotiana tabacum]
Length = 264
Score = 84.3 bits (207), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 62/109 (56%)
Query: 650 FNGTAAGCKLFGFSLTSETPTPSSQSPGKRSCTKVHKQGSLVGRAIDLWRLNGYNDLLSE 709
F A K F S++ + +S + RSCTKV K G +GR+ID+ R+ GY +L+SE
Sbjct: 143 FGSFPAASKTVNFLEQSKSTSGNSDTQCSRSCTKVLKYGCALGRSIDMSRVKGYGELISE 202
Query: 710 LEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHI 758
L+ LF EG L D +K W + Y D E + ++GD PW + V K+ I
Sbjct: 203 LDKLFGFEGSLLDGSKDWHVTYQDREGNTKLLGDYPWSDSQAMVRKMFI 251
>gi|168022407|ref|XP_001763731.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684975|gb|EDQ71373.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 269
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Query: 163 SPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEW 222
+PT+ H+F K +T SD +P++ AE CFP LD P Q L +D+ G W
Sbjct: 158 APTRE--HLFDKAVTPSDVGKLNRLVIPKQHAERCFP-LDLSANSPGQTLSFEDVSGKHW 214
Query: 223 RFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRR 272
RFR+ Y + ++LT GWS FV +K L +GD V F RG EL + RR
Sbjct: 215 RFRYSYWNSSQSYVLTKGWSRFVKEKKLDAGDIVSFERGPSQELYIDFRR 264
>gi|284811269|gb|ADB96373.1| auxin response factor 11 [Arabidopsis thaliana]
gi|304308171|gb|ADL70398.1| auxin response factor 11 [Arabidopsis thaliana]
gi|304308177|gb|ADL70401.1| auxin response factor 11 [Arabidopsis thaliana]
Length = 180
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 60/126 (47%), Gaps = 34/126 (26%)
Query: 654 AAGCKLFGFSLTSE---------------------------------TPTPSSQSPGKRS 680
+ C+LFGF LTS+ +P Q RS
Sbjct: 56 TSSCRLFGFDLTSKPASATIPHDKQLISVDSNISDSTTKCQDPNSSNSPKEQKQQTSTRS 115
Query: 681 CTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMV 740
KV QG+ VGRA+DL L Y++L+ ELE +F +EG L P W I++TD E D M+
Sbjct: 116 RIKVQMQGTAVGRAVDLTLLRSYDELIKELEKMFEIEGELS-PKDKWAIVFTDDEGDRML 174
Query: 741 VGDDPW 746
VGDDPW
Sbjct: 175 VGDDPW 180
>gi|170677574|gb|ACB30859.1| ARF8, partial [Arabidopsis thaliana]
gi|170677576|gb|ACB30860.1| ARF8, partial [Arabidopsis thaliana]
gi|170677578|gb|ACB30861.1| ARF8, partial [Arabidopsis thaliana]
gi|170677580|gb|ACB30862.1| ARF8, partial [Arabidopsis thaliana]
gi|170677582|gb|ACB30863.1| ARF8, partial [Arabidopsis thaliana]
gi|170677584|gb|ACB30864.1| ARF8, partial [Arabidopsis thaliana]
gi|170677586|gb|ACB30865.1| ARF8, partial [Arabidopsis thaliana]
gi|170677588|gb|ACB30866.1| ARF8, partial [Arabidopsis thaliana]
gi|170677590|gb|ACB30867.1| ARF8, partial [Arabidopsis thaliana]
gi|170677592|gb|ACB30868.1| ARF8, partial [Arabidopsis thaliana]
gi|170677594|gb|ACB30869.1| ARF8, partial [Arabidopsis thaliana]
gi|170677596|gb|ACB30870.1| ARF8, partial [Arabidopsis thaliana]
gi|170677598|gb|ACB30871.1| ARF8, partial [Arabidopsis thaliana]
gi|170677600|gb|ACB30872.1| ARF8, partial [Arabidopsis thaliana]
gi|170677602|gb|ACB30873.1| ARF8, partial [Arabidopsis thaliana]
gi|170677604|gb|ACB30874.1| ARF8, partial [Arabidopsis thaliana]
gi|170677606|gb|ACB30875.1| ARF8, partial [Arabidopsis thaliana]
gi|170677608|gb|ACB30876.1| ARF8, partial [Arabidopsis thaliana]
gi|170677610|gb|ACB30877.1| ARF8, partial [Arabidopsis thaliana]
gi|170677612|gb|ACB30878.1| ARF8, partial [Arabidopsis thaliana]
gi|170677614|gb|ACB30879.1| ARF8, partial [Arabidopsis thaliana]
gi|170677616|gb|ACB30880.1| ARF8, partial [Arabidopsis thaliana]
gi|170677618|gb|ACB30881.1| ARF8, partial [Arabidopsis thaliana]
gi|170677620|gb|ACB30882.1| ARF8, partial [Arabidopsis thaliana]
Length = 130
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 59/85 (69%), Gaps = 2/85 (2%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSEND 737
++ KV+K GS VGR++D+ R + Y++L EL +F +EGLL DP + GW++++ D END
Sbjct: 47 KNFVKVYKSGS-VGRSLDISRFSSYHELREELGKMFAIEGLLEDPLRSGWQLVFVDKEND 105
Query: 738 VMVVGDDPWHEFCNEVSKIHIYTQE 762
++++GDDPW F N V I I + E
Sbjct: 106 ILLLGDDPWESFVNNVWYIKILSPE 130
>gi|168059962|ref|XP_001781968.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666541|gb|EDQ53192.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 139
Score = 83.2 bits (204), Expect = 5e-13, Method: Composition-based stats.
Identities = 41/86 (47%), Positives = 58/86 (67%), Gaps = 2/86 (2%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDV 738
RS KV+K GS+ RA+D+ R Y +L EL +FN++G L DP GW++++TD+E+D+
Sbjct: 31 RSYIKVYKLGSIT-RAVDVNRFKDYTELRCELARMFNLDGQL-DPKVGWQLVFTDNEDDL 88
Query: 739 MVVGDDPWHEFCNEVSKIHIYTQEEV 764
++VGDDPW EF V I I T EV
Sbjct: 89 LLVGDDPWEEFVRNVRGIRILTPAEV 114
>gi|168037539|ref|XP_001771261.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677502|gb|EDQ63972.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 227
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 61/106 (57%), Gaps = 3/106 (2%)
Query: 163 SPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEW 222
SPT+ H+F K +T SD +P++ AE CFP LD P Q L +D+ G W
Sbjct: 124 SPTRE--HLFDKAVTPSDVGKLNRLVIPKQHAERCFP-LDLSANSPGQTLSFEDVSGKHW 180
Query: 223 RFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRL 268
RFR+ Y + ++LT GWS FV +K L +GD V F RG++ EL +
Sbjct: 181 RFRYSYWNSSQSYVLTKGWSRFVKEKKLDAGDIVSFERGRNHELYI 226
>gi|326497483|dbj|BAK05831.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 186
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 62/90 (68%), Gaps = 1/90 (1%)
Query: 52 SLSSSIYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQI 110
S+ +Y ELWHACA PL + P+ G++V YFPQGH+EQV AS + ++ +DL P++
Sbjct: 13 SVGDPLYDELWHACAVPLVTAPRVGDLVFYFPQGHIEQVEASMNQVAGNQMRLYDLPPKL 72
Query: 111 FCKVVDVQLLANKENDEVYTQVALLPQPEL 140
C+V++++L A + D+VY QV L+ + E+
Sbjct: 73 LCRVINIELKAEADIDKVYAQVILMLELEV 102
>gi|222629830|gb|EEE61962.1| hypothetical protein OsJ_16730 [Oryza sativa Japonica Group]
Length = 496
Score = 83.2 bits (204), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 89/356 (25%), Positives = 131/356 (36%), Gaps = 56/356 (15%)
Query: 61 LWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQLL 120
+W ACA PL+ +P G V YFP+GH EQ + P+ P C + V L
Sbjct: 28 VWLACAAPLSRIPVVGTQVSYFPEGHAEQCPA-----PLPDPLPSAHRFFLCTITAVDLS 82
Query: 121 ANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASD 180
A+ E Y ++LLP L +A + K LT SD
Sbjct: 83 ADTTTGEPYATISLLP------LRHDAPAPAPAPAPAAAELAEAESQEFRYYAKQLTQSD 136
Query: 181 TSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTG 240
+ GGFSVPR A+ FP L+ P E + G P L+
Sbjct: 137 ANNGGGFSVPRLCADHIFPALNLDDDPPRPE---------------PHHGGPAGRLVGIP 181
Query: 241 WSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNSYPNVLSVVAN 300
+ + D V +R + G P+ V+ V
Sbjct: 182 PHLPRHAAPAPADDRVEQVRERQAAGGRGHGGVHVPQ---------------EVMEAVRL 226
Query: 301 AVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERR---CN 357
A + ++ F V Y PR +FV+P + K + P G + + + M+ RR N
Sbjct: 227 A-AEQAAFRVTYYPRHGAGEFVVPRVEVDKGLTTPWRCGMQVRAQV-MEAEDTRRLAWLN 284
Query: 358 GVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQ--VSPWEIDRSVSLPPLSI 411
G +T + WR L V WD S + V+PW++ + V PPL +
Sbjct: 285 GTLTNLRH-------QQIWRTLEVEWDASAASSSMKNRFVNPWQV-QPVDFPPLPM 332
>gi|23343944|gb|AAN16891.1| auxin-responsive factor protein [Mirabilis jalapa]
Length = 137
Score = 82.8 bits (203), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 57/87 (65%), Gaps = 2/87 (2%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRD-PAKGWRILYTDSEND 737
R+ KVHK GS GR++D+ + + Y +L SEL LF +E L+D P G ++++ D END
Sbjct: 52 RTFVKVHKMGSF-GRSLDISQFSSYQELRSELARLFGLENELKDSPRSGSQLVFVDREND 110
Query: 738 VMVVGDDPWHEFCNEVSKIHIYTQEEV 764
V+++GDDPW EF V I I + +EV
Sbjct: 111 VLLLGDDPWQEFVKTVGHIRILSPQEV 137
>gi|326518498|dbj|BAJ88278.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 151
Score = 81.6 bits (200), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 68/110 (61%), Gaps = 11/110 (10%)
Query: 100 EVPNF-DLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEE 158
++PN+ +L P++ C++ +V + A+ DEVY Q+ L P L+ E ++ L ++
Sbjct: 51 QIPNYPNLPPRLICQLHNVMMHADAGTDEVYAQMTLQP------LSPEEQKEPFLPIELG 104
Query: 159 GGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRP 208
G + PT + F KTLT S+ STHGGFS+PRR+AE FPPLD+ Q P
Sbjct: 105 GASKQPT----NYFYKTLTTSERSTHGGFSLPRRSAEKVFPPLDFSLQPP 150
>gi|25272004|gb|AAN74744.1| hypothetical protein [Marchantia polymorpha]
Length = 690
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 57/105 (54%), Gaps = 1/105 (0%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
H+F K +T SD +P++ AE CFP LD P Q L +D+ G WRFR+ Y
Sbjct: 197 HLFEKAVTPSDVGKLNRLVIPKQHAERCFP-LDLALNAPCQTLSFEDVSGKHWRFRYSYW 255
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSV 274
+ ++ T GWS F+ K L +GD V F RG + EL + RR +
Sbjct: 256 NSSQSYVFTKGWSCFLKGKKLEAGDTVSFERGPNQELYIDFRRRL 300
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 58/111 (52%), Gaps = 1/111 (0%)
Query: 164 PTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWR 223
PT H+F K +T SD +P++ AE CFP LD P Q L +D+ G WR
Sbjct: 64 PTMQREHLFEKAVTPSDVGKLNRLVIPKQHAERCFP-LDLALNVPCQTLSFEDVSGKHWR 122
Query: 224 FRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSV 274
FR+ Y + ++ T WS F+ K L +GD V F RG + EL + RR +
Sbjct: 123 FRYSYWNSSQSYVFTKSWSCFLKGKKLEAGDTVSFERGPNQELYIDFRRRL 173
>gi|304308263|gb|ADL70444.1| auxin response factor 18 [Arabidopsis thaliana]
gi|304308267|gb|ADL70446.1| auxin response factor 18 [Arabidopsis thaliana]
gi|304308271|gb|ADL70448.1| auxin response factor 18 [Arabidopsis thaliana]
gi|304308273|gb|ADL70449.1| auxin response factor 18 [Arabidopsis thaliana]
gi|304308277|gb|ADL70451.1| auxin response factor 18 [Arabidopsis thaliana]
gi|304308279|gb|ADL70452.1| auxin response factor 18 [Arabidopsis thaliana]
gi|304308281|gb|ADL70453.1| auxin response factor 18 [Arabidopsis thaliana]
gi|304308283|gb|ADL70454.1| auxin response factor 18 [Arabidopsis thaliana]
Length = 225
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 64/123 (52%), Gaps = 32/123 (26%)
Query: 653 TAAGCKLFGFSLTSETP----------------------TPSSQSPGK-----RSCTKVH 685
T +LFGF LTS +P TP+S S K RS TKV
Sbjct: 106 TNCSYRLFGFDLTSNSPAPIPQDKQPMDTCGAAKCQEPITPTSMSEQKKQQTSRSRTKVQ 165
Query: 686 KQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEG--LLRDPAKGWRILYTDSENDVMVVGD 743
QG VGRA+DL L Y++L+ ELE +F ++G L RD W +++TD E D+M+ GD
Sbjct: 166 MQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLLARD---KWIVVFTDDEGDMMLAGD 222
Query: 744 DPW 746
DPW
Sbjct: 223 DPW 225
>gi|304308265|gb|ADL70445.1| auxin response factor 18 [Arabidopsis thaliana]
Length = 226
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 64/123 (52%), Gaps = 32/123 (26%)
Query: 653 TAAGCKLFGFSLTSETP----------------------TPSSQSPGK-----RSCTKVH 685
T +LFGF LTS +P TP+S S K RS TKV
Sbjct: 107 TNCSYRLFGFDLTSNSPAPIPQDKQPMDTCGAAKCQEPITPTSMSEQKKQQTSRSRTKVQ 166
Query: 686 KQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEG--LLRDPAKGWRILYTDSENDVMVVGD 743
QG VGRA+DL L Y++L+ ELE +F ++G L RD W +++TD E D+M+ GD
Sbjct: 167 MQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLLARD---KWIVVFTDDEGDMMLAGD 223
Query: 744 DPW 746
DPW
Sbjct: 224 DPW 226
>gi|304308275|gb|ADL70450.1| auxin response factor 18 [Arabidopsis thaliana]
gi|304308285|gb|ADL70455.1| auxin response factor 18 [Arabidopsis thaliana]
Length = 224
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 64/123 (52%), Gaps = 32/123 (26%)
Query: 653 TAAGCKLFGFSLTSETP----------------------TPSSQSPGK-----RSCTKVH 685
T +LFGF LTS +P TP+S S K RS TKV
Sbjct: 105 TNCSYRLFGFDLTSNSPAPIPQDKQPMDTCGAAKCQEPITPTSMSEQKKQQTSRSRTKVQ 164
Query: 686 KQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEG--LLRDPAKGWRILYTDSENDVMVVGD 743
QG VGRA+DL L Y++L+ ELE +F ++G L RD W +++TD E D+M+ GD
Sbjct: 165 MQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLLARD---KWIVVFTDDEGDMMLAGD 221
Query: 744 DPW 746
DPW
Sbjct: 222 DPW 224
>gi|224104803|ref|XP_002333896.1| predicted protein [Populus trichocarpa]
gi|224163513|ref|XP_002338568.1| predicted protein [Populus trichocarpa]
gi|222838928|gb|EEE77279.1| predicted protein [Populus trichocarpa]
gi|222872802|gb|EEF09933.1| predicted protein [Populus trichocarpa]
Length = 109
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 51/78 (65%), Gaps = 5/78 (6%)
Query: 311 FYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRC-----NGVVTGITD 365
F RA+ ++F IP+ K++K + G RFKM FE +D+ ERR G++TG+++
Sbjct: 23 FLPCRASSSEFTIPFNKFLKSLDQSFSSGMRFKMCFETEDAAERRFAIHGYTGIITGVSE 82
Query: 366 LDPYRWPNSKWRCLMVRW 383
LDP RWP SKW+CL+V W
Sbjct: 83 LDPARWPGSKWKCLLVSW 100
>gi|304308269|gb|ADL70447.1| auxin response factor 18 [Arabidopsis thaliana]
Length = 225
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 64/123 (52%), Gaps = 32/123 (26%)
Query: 653 TAAGCKLFGFSLTSETP----------------------TPSSQSPGK-----RSCTKVH 685
T +LFGF LTS +P TP+S S K RS TKV
Sbjct: 106 TNCSYRLFGFDLTSNSPAPIPQDKQPMDTCGAAKCQEPITPTSMSEQKKQQTSRSRTKVQ 165
Query: 686 KQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEG--LLRDPAKGWRILYTDSENDVMVVGD 743
QG VGRA+DL L Y++L+ ELE +F ++G L RD W +++TD E D+M+ GD
Sbjct: 166 MQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLLARD---KWIVVFTDDEGDMMLAGD 222
Query: 744 DPW 746
DPW
Sbjct: 223 DPW 225
>gi|284811299|gb|ADB96388.1| auxin response factor 18 [Arabidopsis thaliana]
gi|284811301|gb|ADB96389.1| auxin response factor 18 [Arabidopsis thaliana]
gi|284811305|gb|ADB96391.1| auxin response factor 18 [Arabidopsis thaliana]
gi|284811307|gb|ADB96392.1| auxin response factor 18 [Arabidopsis thaliana]
Length = 222
Score = 80.9 bits (198), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 64/123 (52%), Gaps = 32/123 (26%)
Query: 653 TAAGCKLFGFSLTSETP----------------------TPSSQSPGK-----RSCTKVH 685
T +LFGF LTS +P TP+S S K RS TKV
Sbjct: 103 TNCSYRLFGFDLTSNSPAPIPQDKQPMDTCGAAKCQEPITPTSMSEQKKQQTSRSRTKVQ 162
Query: 686 KQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEG--LLRDPAKGWRILYTDSENDVMVVGD 743
QG VGRA+DL L Y++L+ ELE +F ++G L RD W +++TD E D+M+ GD
Sbjct: 163 MQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLLARD---KWIVVFTDDEGDMMLAGD 219
Query: 744 DPW 746
DPW
Sbjct: 220 DPW 222
>gi|224064496|ref|XP_002301505.1| predicted protein [Populus trichocarpa]
gi|222843231|gb|EEE80778.1| predicted protein [Populus trichocarpa]
Length = 91
Score = 80.9 bits (198), Expect = 3e-12, Method: Composition-based stats.
Identities = 34/61 (55%), Positives = 43/61 (70%)
Query: 198 FPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVL 257
F LDY + P + ++AKD+HG W+FRHIYRG PRRHLL TGWS FV++KN G +
Sbjct: 10 FSRLDYTAEPPEETILAKDVHGETWKFRHIYRGAPRRHLLNTGWSNFVNKKNSWLGTRLC 69
Query: 258 F 258
F
Sbjct: 70 F 70
>gi|2708482|gb|AAB92475.1| IAA25 [Arabidopsis thaliana]
Length = 476
Score = 80.1 bits (196), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 51/78 (65%), Gaps = 1/78 (1%)
Query: 693 RAIDLWRLNGYNDLLSELEHLFNMEGLLRDP-AKGWRILYTDSENDVMVVGDDPWHEFCN 751
R D+ R GY++L +L +F +EG L DP W+++Y D END+++VGDDPW EF N
Sbjct: 362 RMRDVNRYRGYDELRHDLARMFGIEGQLEDPQTSDWKLVYVDHENDILLVGDDPWEEFVN 421
Query: 752 EVSKIHIYTQEEVEKMTI 769
V I I + EV++M++
Sbjct: 422 CVQSIKILSSAEVQQMSL 439
>gi|302800377|ref|XP_002981946.1| hypothetical protein SELMODRAFT_115320 [Selaginella moellendorffii]
gi|302802339|ref|XP_002982925.1| hypothetical protein SELMODRAFT_117335 [Selaginella moellendorffii]
gi|300149515|gb|EFJ16170.1| hypothetical protein SELMODRAFT_117335 [Selaginella moellendorffii]
gi|300150388|gb|EFJ17039.1| hypothetical protein SELMODRAFT_115320 [Selaginella moellendorffii]
Length = 93
Score = 79.7 bits (195), Expect = 5e-12, Method: Composition-based stats.
Identities = 37/86 (43%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Query: 683 KVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVG 742
+V+K GS +GRA+D+ R Y +L +EL +F ++G L D GW++++ D END+++VG
Sbjct: 1 QVYKLGS-IGRAVDVARFKNYVELRAELSRMFGLDGQL-DQRNGWQLVFVDKENDLLLVG 58
Query: 743 DDPWHEFCNEVSKIHIYTQEEVEKMT 768
DDPW EF + V I I + EV T
Sbjct: 59 DDPWEEFVSSVRGIRILSPSEVSYYT 84
>gi|304308287|gb|ADL70456.1| auxin response factor 18 [Arabidopsis thaliana]
Length = 225
Score = 79.7 bits (195), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 64/123 (52%), Gaps = 32/123 (26%)
Query: 653 TAAGCKLFGFSLTSETP----------------------TPSSQSPGK-----RSCTKVH 685
T +LFGF L+S +P TP+S S K RS TKV
Sbjct: 106 TNCSYRLFGFDLSSNSPAPIPQDKQPMDTCGAAKCQEPITPTSMSEQKKQQTSRSRTKVQ 165
Query: 686 KQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEG--LLRDPAKGWRILYTDSENDVMVVGD 743
QG VGRA+DL L Y++L+ ELE +F ++G L RD W +++TD E D+M+ GD
Sbjct: 166 MQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLLARD---KWIVVFTDDEGDMMLAGD 222
Query: 744 DPW 746
DPW
Sbjct: 223 DPW 225
>gi|298113241|gb|ADB96390.2| auxin response factor 18 [Arabidopsis thaliana]
Length = 231
Score = 79.3 bits (194), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 64/123 (52%), Gaps = 32/123 (26%)
Query: 653 TAAGCKLFGFSLTSETP----------------------TPSSQSPGK-----RSCTKVH 685
T +LFGF L+S +P TP+S S K RS TKV
Sbjct: 112 TNCSYRLFGFDLSSNSPAPIPQDKQPMDTCGAAKCQEPITPTSMSEQKKQQTSRSRTKVQ 171
Query: 686 KQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEG--LLRDPAKGWRILYTDSENDVMVVGD 743
QG VGRA+DL L Y++L+ ELE +F ++G L RD W +++TD E D+M+ GD
Sbjct: 172 MQGIAVGRAVDLTLLKSYDELIDELEEMFEIQGQLLARD---KWIVVFTDDEGDMMLAGD 228
Query: 744 DPW 746
DPW
Sbjct: 229 DPW 231
Score = 41.6 bits (96), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 372 PNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLS 410
P SKWR L V+WDE ++VSPWEI+ ++ P+S
Sbjct: 1 PASKWRSLQVQWDEPTTVQRPDKVSPWEIEPFLATSPIS 39
>gi|302759398|ref|XP_002963122.1| hypothetical protein SELMODRAFT_438333 [Selaginella moellendorffii]
gi|300169983|gb|EFJ36585.1| hypothetical protein SELMODRAFT_438333 [Selaginella moellendorffii]
Length = 289
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 62/101 (61%), Gaps = 10/101 (9%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDV 738
RS TKV K GS +GR++++ R N Y +L SEL +F +EG L D + W+++Y D++ D+
Sbjct: 182 RSYTKVLKLGS-IGRSLNIARFNSYAELRSELARMFGLEGQL-DQSSHWQLVYMDNDGDI 239
Query: 739 MVVGDDPWHEFCNEV--------SKIHIYTQEEVEKMTIGT 771
++VGDD W EF + V S++ IYT EE + T
Sbjct: 240 LLVGDDRWEEFVSSVRGIRIISPSEVAIYTSEEYAGTPLST 280
>gi|302796880|ref|XP_002980201.1| hypothetical protein SELMODRAFT_444454 [Selaginella moellendorffii]
gi|300151817|gb|EFJ18461.1| hypothetical protein SELMODRAFT_444454 [Selaginella moellendorffii]
Length = 289
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 61/101 (60%), Gaps = 10/101 (9%)
Query: 679 RSCTKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDV 738
RS TKV K GS +GR++++ R N Y +L SEL +F +EG L D + W+++Y D++ D+
Sbjct: 182 RSYTKVLKLGS-IGRSLNIARFNSYAELRSELARMFGLEGQL-DQSSHWQLVYMDNDGDI 239
Query: 739 MVVGDDPWHEFCNEV--------SKIHIYTQEEVEKMTIGT 771
++VGDD W EF V S++ IYT EE + T
Sbjct: 240 LLVGDDRWEEFVTSVRGIRIISPSEVAIYTSEEYAGTPLST 280
>gi|357485553|ref|XP_003613064.1| Auxin response factor 3b [Medicago truncatula]
gi|355514399|gb|AES96022.1| Auxin response factor 3b [Medicago truncatula]
Length = 412
Score = 79.0 bits (193), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 70/126 (55%), Gaps = 7/126 (5%)
Query: 277 RNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVK-IIMNP 335
R LP S+LS N + L V AN +++ V Y P A ++FV+P KY + ++
Sbjct: 34 RISLPSSVLSANNMPIDALVVAAN----RTLLPVVYYPGACVSEFVVPLSKYNNALFVSQ 89
Query: 336 ICIGTRFKMRFEMDDSPERRCN-GVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQ 394
+ IG RF M FE + + CN G + GI+DLDP WP+S+W+ + V+WD+ +
Sbjct: 90 LSIGLRFDMMFETK-AFDTCCNMGTIVGISDLDPLMWPDSRWKNIEVKWDKPDCGGKPNR 148
Query: 395 VSPWEI 400
V W+I
Sbjct: 149 VCSWDI 154
>gi|297725437|ref|NP_001175082.1| Os07g0183600 [Oryza sativa Japonica Group]
gi|255677566|dbj|BAH93810.1| Os07g0183600 [Oryza sativa Japonica Group]
Length = 354
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 108/248 (43%), Gaps = 31/248 (12%)
Query: 160 GGRSP-TKSTPHMFCKTLTASD-TSTHGGFSVPRR-AAEDCFPPLDYKQQRPSQELVAKD 216
G SP ++T F K LT +D F VP+R A P L + P L KD
Sbjct: 21 GPSSPQVQTTLVSFVKPLTCTDAVKNRYRFIVPKRETAMGVLPQLQLNEHVP---LYIKD 77
Query: 217 LHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKD-GELRLGIRRSVQ 275
+HG EW + ++ H+L++GW F + LV+GD V+F+R D GE +G+RR+++
Sbjct: 78 MHGKEWVINYTWKEY--THMLSSGWIKFANANRLVTGDNVVFMRSMDSGERYMGLRRTLK 135
Query: 276 PRNGLPDSILSKQNSYPNVLSVVANAVSTKSMFHVFYSPRATHADFVIP---YQKYVKII 332
P P S+ V+ V A + F V Y R +FV+P ++
Sbjct: 136 PE---PVSV-------DEVIEAVWRAARLEP-FEVTYLSRQDGDEFVVPCGIVHNALRAK 184
Query: 333 MNPICIGTRFKMRFEMDDSPERRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQ 392
P + F E D P G V I + + S WR + V W C G +
Sbjct: 185 FTPGMV-VNFVWAVEEDRLPNVGPQGKVIAIEN-----YATSIWRMIQVEWPSCAGMNR- 237
Query: 393 EQVSPWEI 400
V+ W+I
Sbjct: 238 -YVNFWQI 244
>gi|295918075|gb|ADG60256.1| ARF8-like protein [Nicotiana tabacum]
Length = 119
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 54/77 (70%), Gaps = 1/77 (1%)
Query: 692 GRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAK-GWRILYTDSENDVMVVGDDPWHEFC 750
GR++D+ + + Y++L EL +F +EG L DP + GW++++ D END++++GDDPW F
Sbjct: 4 GRSLDITQFHSYHELRRELGQMFGIEGFLEDPQRSGWQLVFVDRENDILLLGDDPWEAFV 63
Query: 751 NEVSKIHIYTQEEVEKM 767
N V I I + E+V+K+
Sbjct: 64 NNVWYIKILSPEDVQKL 80
>gi|326512192|dbj|BAJ96077.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 123
Score = 77.4 bits (189), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 54/77 (70%), Gaps = 6/77 (7%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFP-PIEVPNF-DLQPQIFCKVVDV 117
ELWHACAGPL SLP G+ V+YFPQGH EQVA+S+ ++PN+ +L PQ+ C++ +
Sbjct: 27 ELWHACAGPLVSLPAVGSRVIYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLICQLHN- 85
Query: 118 QLLANKENDEVYTQVAL 134
A+ E DEVY Q+ L
Sbjct: 86 ---ADVETDEVYAQMTL 99
>gi|80750878|dbj|BAE48151.1| auxin response factor 3 [Arabidopsis thaliana]
Length = 100
Score = 77.0 bits (188), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 6/65 (9%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVD 116
+ ELWHACAGPL SLPK+G++V+YFPQGHLEQ P + L P +FC+++D
Sbjct: 42 VCLELWHACAGPLISLPKRGSLVLYFPQGHLEQA------PDFSAAIYGLPPHVFCRILD 95
Query: 117 VQLLA 121
V+L A
Sbjct: 96 VKLHA 100
>gi|238013004|gb|ACR37537.1| unknown [Zea mays]
Length = 82
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/55 (58%), Positives = 44/55 (80%)
Query: 713 LFNMEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
+F+ EG L ++ W+I+YTD E D+M+VGDDPW EFC+ V KI+IYT+EEV+KM
Sbjct: 1 MFDFEGELVSGSQNWQIVYTDDEGDMMLVGDDPWEEFCSIVRKIYIYTKEEVQKM 55
>gi|302762190|ref|XP_002964517.1| hypothetical protein SELMODRAFT_405821 [Selaginella moellendorffii]
gi|300168246|gb|EFJ34850.1| hypothetical protein SELMODRAFT_405821 [Selaginella moellendorffii]
Length = 335
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 72/133 (54%), Gaps = 13/133 (9%)
Query: 648 GSFNGTAAGCKLFGFSLTSETPTPSSQSPG--------KRSCTKVHKQG-SLVGRAIDLW 698
G+ N + C LFGF L ++T S+ R+ T KQ +GRA+DL
Sbjct: 106 GNANDSDRECTLFGFWLKAKTALASTAKDDVHKDLESLARTGTSSSKQDVHQMGRALDLR 165
Query: 699 RLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGDDPWHEFCNE--VSKI 756
+ GY +LL EL+HLF ++ L W+ +Y D+E D+++VGDDPW F + +
Sbjct: 166 KFRGYRELLEELQHLFGIDKNLNGSE--WQAVYVDNEGDMLLVGDDPWGVFTFQGVLHDG 223
Query: 757 HIYTQEEVEKMTI 769
+++ E++K+T+
Sbjct: 224 AMHSAAEIQKLTV 236
Score = 40.8 bits (94), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/29 (55%), Positives = 18/29 (62%)
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRW 383
R G +TGI D+DP RWP SKWR W
Sbjct: 55 RYMGTITGIGDIDPARWPGSKWRFPKCSW 83
>gi|302819737|ref|XP_002991538.1| hypothetical protein SELMODRAFT_133669 [Selaginella moellendorffii]
gi|300140740|gb|EFJ07460.1| hypothetical protein SELMODRAFT_133669 [Selaginella moellendorffii]
Length = 262
Score = 75.1 bits (183), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
H+F K +T SD +P++ AE CFP LD L +D+ G WRFR+ Y
Sbjct: 157 HLFDKAVTPSDVGKLNRLVIPKQHAERCFP-LDLSANEKGLLLSFEDITGKVWRFRYSYW 215
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQP 276
+ ++LT GWS FV +K L +GD V F RG EL + RR P
Sbjct: 216 NSSQSYVLTKGWSRFVKEKKLDAGDIVTFERGPGQELYISWRRRPVP 262
>gi|302794600|ref|XP_002979064.1| hypothetical protein SELMODRAFT_110104 [Selaginella moellendorffii]
gi|300153382|gb|EFJ20021.1| hypothetical protein SELMODRAFT_110104 [Selaginella moellendorffii]
Length = 261
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
H+F K +T SD +P++ AE CFP LD L +D+ G WRFR+ Y
Sbjct: 156 HLFDKAVTPSDVGKLNRLVIPKQHAERCFP-LDLSANEKGLLLSFEDITGKVWRFRYSYW 214
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQP 276
+ ++LT GWS FV +K L +GD V F RG EL + RR P
Sbjct: 215 NSSQSYVLTKGWSRFVKEKKLDAGDIVTFERGPGQELYISWRRRPVP 261
>gi|301793233|emb|CBA12007.1| putative auxin response factor 10/16/17, partial [Cycas rumphii]
Length = 528
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 71/142 (50%), Gaps = 6/142 (4%)
Query: 285 LSKQNSYPNVLSVVANA--VSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRF 342
S+ S + SVV +A + F V Y PRA+ +F + Q + G RF
Sbjct: 42 FSRNRSKVSAKSVVESATLAAAGQPFEVVYYPRASTPEFCVKAQAVDAALRVQWSAGMRF 101
Query: 343 KMRFEMDDSPE-RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEID 401
KM FE +DS G ++ + DP WPNS WR L V WDE + ++VSPW ++
Sbjct: 102 KMAFETEDSSRISWFMGTISSVQLADPVCWPNSPWRLLQVTWDEPDLLQNVKRVSPWLVE 161
Query: 402 RSVSLPPLSIQ--SSPRMKKLR 421
S+PP+ + + P+ KKLR
Sbjct: 162 VVSSMPPIQLTPFTLPK-KKLR 182
Score = 45.1 bits (105), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 40/85 (47%), Gaps = 4/85 (4%)
Query: 683 KVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVG 742
KV + VGR +DL + Y L L +F +E L R+LY D++ V G
Sbjct: 446 KVFMESEDVGRTLDLSLFSSYEQLYHRLAKMFGIEELELSN----RVLYKDTDGTVRHTG 501
Query: 743 DDPWHEFCNEVSKIHIYTQEEVEKM 767
D+P+ +F V ++ I + + M
Sbjct: 502 DEPYRDFMKTVRRLTILSDSSSDNM 526
>gi|294462071|gb|ADE76589.1| unknown [Picea sitchensis]
Length = 86
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 53/78 (67%), Gaps = 2/78 (2%)
Query: 726 GWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKMTIGTTDDTQSCLDQAPVI 785
G ++LYTD+E+D+M+VGDDPW EFCN KI IYT +EV+KMT D + ++ P
Sbjct: 5 GPQVLYTDNEDDMMLVGDDPWQEFCNIACKILIYTHDEVQKMTPSMFSDDVNSSEEQPST 64
Query: 786 MEVSVSKSSSVSQPDSSP 803
+E VSKSS +Q SSP
Sbjct: 65 VE--VSKSSIDNQDSSSP 80
>gi|147782990|emb|CAN68564.1| hypothetical protein VITISV_032171 [Vitis vinifera]
Length = 364
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 70/143 (48%), Gaps = 3/143 (2%)
Query: 142 GLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPL 201
GL+ K+ G+ G TKS +F KT+T SD +P++ AE FP L
Sbjct: 161 GLDANGKRSRAEGLMTPFGSDRVTKSREQLFEKTVTPSDVGKLNRLVIPKQHAEKHFP-L 219
Query: 202 DYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRG 261
L +D+ G WRFR+ Y + ++LT GWS FV +KNL +GD V F R
Sbjct: 220 QTGTTSKGVLLNFEDMGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFQRS 279
Query: 262 KDGELRLGIRRSVQPRNGLPDSI 284
G+ +L I + RNG + I
Sbjct: 280 TGGDKQLYI--DWKARNGPTNQI 300
>gi|225423895|ref|XP_002281709.1| PREDICTED: AP2/ERF and B3 domain-containing transcription repressor
TEM1-like [Vitis vinifera]
Length = 358
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/143 (34%), Positives = 70/143 (48%), Gaps = 3/143 (2%)
Query: 142 GLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPL 201
GL+ K+ G+ G TKS +F KT+T SD +P++ AE FP L
Sbjct: 161 GLDANGKRSRAEGLMTPFGSDRVTKSREQLFEKTVTPSDVGKLNRLVIPKQHAEKHFP-L 219
Query: 202 DYKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRG 261
L +D+ G WRFR+ Y + ++LT GWS FV +KNL +GD V F R
Sbjct: 220 QTGTTSKGVLLNFEDMGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFQRS 279
Query: 262 KDGELRLGIRRSVQPRNGLPDSI 284
G+ +L I + RNG + I
Sbjct: 280 TGGDKQLYI--DWKARNGPTNQI 300
>gi|449475565|ref|XP_004154491.1| PREDICTED: uncharacterized protein LOC101227484 [Cucumis sativus]
Length = 180
Score = 73.2 bits (178), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 57 IYFELWHACAGPLTSLPKKGNVVVYFPQGHLEQV-ASSSAFPPIEVPNFDLQPQIFCKVV 115
+Y ELW ACAGPL +P G V YFPQGH+EQ+ S++ ++P+FDL P+I C+VV
Sbjct: 20 LYEELWKACAGPLVEVPVDGERVFYFPQGHMEQLEESTNQELNHQIPHFDLPPKILCRVV 79
Query: 116 DVQLLA 121
+++LL
Sbjct: 80 NIRLLV 85
>gi|224062031|ref|XP_002300720.1| predicted protein [Populus trichocarpa]
gi|222842446|gb|EEE79993.1| predicted protein [Populus trichocarpa]
Length = 75
Score = 72.0 bits (175), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/65 (47%), Positives = 46/65 (70%), Gaps = 2/65 (3%)
Query: 683 KVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDP-AKGWRILYTDSENDVMVV 741
+V K GS VGR+ID+ Y +L S +E +F ++GLL +P GW+++Y D ENDV+++
Sbjct: 11 QVQKTGS-VGRSIDVSSFKNYEELCSAIECMFGLDGLLNNPKGSGWKLVYVDYENDVLLI 69
Query: 742 GDDPW 746
GDDPW
Sbjct: 70 GDDPW 74
>gi|357140933|ref|XP_003572011.1| PREDICTED: putative B3 domain-containing protein Os10g0537100-like
[Brachypodium distachyon]
Length = 213
Score = 72.0 bits (175), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 52/92 (56%), Gaps = 1/92 (1%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
HMF K +T SD +P++ AE FP LD+ + L ++ G WRFR+ Y
Sbjct: 5 HMFEKVVTPSDVGKLNRLVIPKQHAERYFP-LDFDKGNGGIILSFEERGGKAWRFRYSYW 63
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRG 261
+ +++T GWS FV K L++GDAVLF RG
Sbjct: 64 NSSQSYVMTKGWSRFVKDKRLLAGDAVLFARG 95
>gi|147765452|emb|CAN60440.1| hypothetical protein VITISV_032287 [Vitis vinifera]
Length = 893
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 48/78 (61%), Gaps = 10/78 (12%)
Query: 124 ENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASDTST 183
+ DEVY Q+ L P L ++ +D + E G P+K + FCKTL ASDTST
Sbjct: 375 KTDEVYAQMTLQP--------LSPQEQKDAYLPAELG--VPSKQPSNYFCKTLIASDTST 424
Query: 184 HGGFSVPRRAAEDCFPPL 201
HGGFSVPRRAAE FPPL
Sbjct: 425 HGGFSVPRRAAEKVFPPL 442
>gi|449445748|ref|XP_004140634.1| PREDICTED: B3 domain-containing transcription factor NGA2-like
[Cucumis sativus]
gi|449515921|ref|XP_004164996.1| PREDICTED: B3 domain-containing transcription factor NGA2-like
[Cucumis sativus]
Length = 354
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 55/112 (49%), Gaps = 1/112 (0%)
Query: 150 LEDLGVDEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPS 209
L DL + E G + HMF K +T SD +P++ AE FP LD
Sbjct: 72 LMDLSLRMESNGFADVVEREHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSTNDKG 130
Query: 210 QELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRG 261
L +D HG WRFR+ Y + +++T GWS FV +K L +GD V F R
Sbjct: 131 LILNFEDRHGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFHRA 182
>gi|304307963|gb|ADL70294.1| auxin response factor 3 [Arabidopsis thaliana]
Length = 241
Score = 70.9 bits (172), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 71/154 (46%), Gaps = 31/154 (20%)
Query: 381 VRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGGV 440
VRWD+ + + HQ++VSPWEI+ S S+ + K+ R G + PD PVS G
Sbjct: 1 VRWDDIVANGHQQRVSPWEIEPSGSISNSGSFVTTGPKRSRIGFSSGKPDIPVS-EGIRA 59
Query: 441 LDFEESVRSSKVLQGQENV-GFVSPLYGCDTVNHPLGFEMRAPAHQSLALNGIRKDNINE 499
DFEES+R +VLQGQE GF++ S G R+
Sbjct: 60 TDFEESLRFQRVLQGQEIFPGFINTC--------------------SDGGAGARRGRFKG 99
Query: 500 LVRALPTSYTGFVESNRFPKVLQGQEICPLRSLT 533
T F +S F KVLQGQE P S+T
Sbjct: 100 ---------TEFGDSYGFHKVLQGQETVPAYSIT 124
>gi|58982624|gb|AAW83473.1| RAV transcription factor [Capsicum annuum]
Length = 399
Score = 70.5 bits (171), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 69/142 (48%), Gaps = 7/142 (4%)
Query: 159 GGG---RSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAK 215
GGG + K +F K +T SD +P++ AE FP L L +
Sbjct: 197 GGGTIDKVNNKVREQLFEKAVTPSDVGKLNRLVIPKQHAEKHFP-LQNGNNSKGVLLNFE 255
Query: 216 DLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGI---RR 272
DL+G WRFR+ Y + ++LT GWS FV +KNL +GD V F R G+ +L I R
Sbjct: 256 DLNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFQRSTSGDKQLYIDFKAR 315
Query: 273 SVQPRNGLPDSILSKQNSYPNV 294
++ P N + + + Q P V
Sbjct: 316 NMAPTNPVVTNQVQAQVQVPRV 337
>gi|33320073|gb|AAQ05799.1|AF478458_1 DNA binding protein Rav [Capsicum annuum]
Length = 386
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 69/142 (48%), Gaps = 7/142 (4%)
Query: 159 GGG---RSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAK 215
GGG + K +F K +T SD +P++ AE FP L L +
Sbjct: 184 GGGTIDKVNNKVREQLFEKAVTPSDVGKLNRLVIPKQHAEKHFP-LQNGNNSKGVLLNFE 242
Query: 216 DLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGI---RR 272
DL+G WRFR+ Y + ++LT GWS FV +KNL +GD V F R G+ +L I R
Sbjct: 243 DLNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFQRSTSGDKQLYIDFKAR 302
Query: 273 SVQPRNGLPDSILSKQNSYPNV 294
++ P N + + + Q P V
Sbjct: 303 NMAPTNPVVTNQVQAQVQVPRV 324
>gi|242035245|ref|XP_002465017.1| hypothetical protein SORBIDRAFT_01g030520 [Sorghum bicolor]
gi|241918871|gb|EER92015.1| hypothetical protein SORBIDRAFT_01g030520 [Sorghum bicolor]
Length = 274
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 52/104 (50%), Gaps = 8/104 (7%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQE--------LVAKDLHGVE 221
HMF K +T SD +P++ AE FP LD + L +D G
Sbjct: 28 HMFEKVVTPSDVGKLNRLVIPKQHAERYFPALDASAAAAAAAAGGGKGLVLSFEDRAGKA 87
Query: 222 WRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGE 265
WRFR+ Y + +++T GWS FV +K L +GD VLF RG GE
Sbjct: 88 WRFRYSYWNSSQSYVMTKGWSRFVKEKRLGAGDTVLFARGAGGE 131
>gi|253560642|gb|ACT33043.1| RAV transcription factor [Camellia sinensis]
Length = 362
Score = 69.7 bits (169), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 63/120 (52%), Gaps = 7/120 (5%)
Query: 162 RSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVE 221
++ K+T +F K +T SD +P++ AE FP L + L KD+ G
Sbjct: 192 KNNVKATEQLFEKAVTPSDVGKLNRLVIPKQHAEKHFP-LQSETTSKGVLLNFKDVAGKV 250
Query: 222 WRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLR--GKDGELRLGIRRSVQPRNG 279
WRFR+ Y + ++LT GWS FV +K+L +GD V F R G D +L + + PRNG
Sbjct: 251 WRFRYSYWNSSQSYVLTKGWSRFVKEKSLKAGDIVSFYRSTGSDNQLFIDWK----PRNG 306
>gi|297824777|ref|XP_002880271.1| hypothetical protein ARALYDRAFT_483854 [Arabidopsis lyrata subsp.
lyrata]
gi|297326110|gb|EFH56530.1| hypothetical protein ARALYDRAFT_483854 [Arabidopsis lyrata subsp.
lyrata]
Length = 311
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 56/119 (47%), Gaps = 6/119 (5%)
Query: 159 GGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLH 218
G G HMF K +T SD +P++ AE FP LD L +DL
Sbjct: 23 GAGTREVAEREHMFDKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSSNEKGLLLNFEDLT 81
Query: 219 GVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLR-----GKDGELRLGIRR 272
G WRFR+ Y + +++T GWS FV K L +GD V F R G+D L + RR
Sbjct: 82 GKSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRCVGDSGRDSRLFIDWRR 140
>gi|297789622|ref|XP_002862757.1| hypothetical protein ARALYDRAFT_497309 [Arabidopsis lyrata subsp.
lyrata]
gi|297308467|gb|EFH39015.1| hypothetical protein ARALYDRAFT_497309 [Arabidopsis lyrata subsp.
lyrata]
Length = 312
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 56/119 (47%), Gaps = 6/119 (5%)
Query: 159 GGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLH 218
G G HMF K +T SD +P++ AE FP LD L +DL
Sbjct: 24 GAGTREVAEREHMFDKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSSNEKGLLLNFEDLT 82
Query: 219 GVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLR-----GKDGELRLGIRR 272
G WRFR+ Y + +++T GWS FV K L +GD V F R G+D L + RR
Sbjct: 83 GKSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRCVGDSGRDSRLFIDWRR 141
>gi|413917350|gb|AFW57282.1| hypothetical protein ZEAMMB73_740283 [Zea mays]
Length = 249
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 75/175 (42%), Gaps = 15/175 (8%)
Query: 103 NFDLQPQIFCKVVDVQLLANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGR 162
+ DL +V D Q + ++N+ Q AL G +L +Q GV G
Sbjct: 3 HMDLSLGTLVEVEDSQEVQEEDNNLYKQQRAL-------GQDLHRRQ----GVSGGGPSH 51
Query: 163 SPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEW 222
S HMF K LT SD VP++ AE FP S +L +D G W
Sbjct: 52 SHGVEREHMFDKVLTPSDVGKLNRLVVPKQHAERFFPAAGAG----STQLCFQDRGGALW 107
Query: 223 RFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPR 277
+FR+ Y G + +++T GWS FV L +GD V F R G + R + R
Sbjct: 108 QFRYSYWGSSQSYVMTKGWSRFVRAARLAAGDTVTFSRSGGGRYFIEYRHCQRRR 162
>gi|298113103|gb|ADC31715.2| auxin response factor 13 [Arabidopsis thaliana]
Length = 190
Score = 69.3 bits (168), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/132 (34%), Positives = 62/132 (46%), Gaps = 32/132 (24%)
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
V++ V NA TK MF+V Y PR M+FE D E
Sbjct: 8 VIASVVNAFKTKCMFNVVYKPR----------------------------MQFEGKDFSE 39
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS 413
+R +G + G+ D+ P+ W +S+WR L V+WDE QVSPW+I+ L P S S
Sbjct: 40 KRYDGTIIGVNDMSPH-WKDSEWRSLKVQWDELSPFLRPNQVSPWDIEH---LIPSSDIS 95
Query: 414 SPRMKKLRTGLQ 425
+KK + LQ
Sbjct: 96 QSSLKKKKHWLQ 107
>gi|18407193|ref|NP_566089.1| B3 domain-containing transcription factor NGA1 [Arabidopsis
thaliana]
gi|75100798|sp|O82799.1|NGA1_ARATH RecName: Full=B3 domain-containing transcription factor NGA1;
AltName: Full=Protein NGATHA 1
gi|3522951|gb|AAC34233.1| putative RAV-like B3 domain DNA binding protein [Arabidopsis
thaliana]
gi|20197317|gb|AAM15018.1| putative RAV-like B3 domain DNA binding protein [Arabidopsis
thaliana]
gi|26451145|dbj|BAC42676.1| putative RAV-like B3 domain DNA binding protein [Arabidopsis
thaliana]
gi|30793817|gb|AAP40361.1| putative RAV B3 domain DNA binding protein [Arabidopsis thaliana]
gi|330255671|gb|AEC10765.1| B3 domain-containing transcription factor NGA1 [Arabidopsis
thaliana]
Length = 310
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 58/121 (47%), Gaps = 7/121 (5%)
Query: 157 EEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKD 216
EE G R HMF K +T SD +P++ AE FP LD L +D
Sbjct: 21 EEEGARE-VADREHMFDKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSSNEKGLLLNFED 78
Query: 217 LHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLR-----GKDGELRLGIR 271
L G WRFR+ Y + +++T GWS FV K L +GD V F R G+D L + R
Sbjct: 79 LTGKSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRCVGDSGRDSRLFIDWR 138
Query: 272 R 272
R
Sbjct: 139 R 139
>gi|291197510|emb|CAZ68123.1| NGATHA1 [Arabidopsis halleri subsp. halleri]
Length = 313
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/119 (36%), Positives = 56/119 (47%), Gaps = 6/119 (5%)
Query: 159 GGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLH 218
G G HMF K +T SD +P++ AE F PLD L +DL
Sbjct: 24 GAGTRQVAEREHMFDKVVTPSDVGKLNRLVIPKQHAERFF-PLDSSSNEKGLLLNFEDLT 82
Query: 219 GVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLR-----GKDGELRLGIRR 272
G WRFR+ Y + +++T GWS FV K L +GD V F R G+D L + RR
Sbjct: 83 GKSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRCVGDSGRDSRLFIDWRR 141
>gi|242062916|ref|XP_002452747.1| hypothetical protein SORBIDRAFT_04g031710 [Sorghum bicolor]
gi|241932578|gb|EES05723.1| hypothetical protein SORBIDRAFT_04g031710 [Sorghum bicolor]
Length = 434
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 58/115 (50%), Gaps = 5/115 (4%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
HMF K +T SD +P++ AE FP LD L +D G WRFR+ Y
Sbjct: 101 HMFDKVVTPSDVGKLNRLVIPKQYAEKYFP-LDAAANEKGLLLSFEDSAGKHWRFRYSYW 159
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLR--GKDGELRLGI--RRSVQPRNGL 280
+ +++T GWS FV +K LV+GD V F R +D RL I +R V R L
Sbjct: 160 NSSQSYVMTKGWSRFVKEKRLVAGDTVSFSRAAAEDARHRLFIDWKRRVDTRGPL 214
>gi|298111031|gb|ADB96337.2| auxin response factor 3 [Arabidopsis thaliana]
Length = 240
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 70/153 (45%), Gaps = 31/153 (20%)
Query: 382 RWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGGVL 441
RWD+ + + HQ++VSPWEI+ S S+ + K+ R G + PD PVS G
Sbjct: 1 RWDDIVANGHQQRVSPWEIEPSGSISNSGSFVTTGPKRSRIGFSSGKPDIPVS-EGICAT 59
Query: 442 DFEESVRSSKVLQGQENV-GFVSPLYGCDTVNHPLGFEMRAPAHQSLALNGIRKDNINEL 500
DFEES+R +VLQGQE GF++ S G R+
Sbjct: 60 DFEESLRFQRVLQGQEIFPGFINTC--------------------SDGGAGARRGRFKG- 98
Query: 501 VRALPTSYTGFVESNRFPKVLQGQEICPLRSLT 533
T F +S F KVLQGQE P S+T
Sbjct: 99 --------TEFGDSYGFHKVLQGQETVPAYSIT 123
>gi|227060666|gb|ACP18971.1| NGATHA1 [Arabidopsis thaliana]
Length = 310
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 58/121 (47%), Gaps = 7/121 (5%)
Query: 157 EEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKD 216
EE G R HMF K +T SD +P++ AE FP LD L +D
Sbjct: 21 EEEGARE-VADREHMFDKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSSNEKGLLLNFED 78
Query: 217 LHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLR-----GKDGELRLGIR 271
L G WRFR+ Y + +++T GWS FV K L +GD V F R G+D L + R
Sbjct: 79 LTGKSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRCVGDSGRDSRLFIDWR 138
Query: 272 R 272
R
Sbjct: 139 R 139
>gi|255548087|ref|XP_002515100.1| hypothetical protein RCOM_1340820 [Ricinus communis]
gi|223545580|gb|EEF47084.1| hypothetical protein RCOM_1340820 [Ricinus communis]
Length = 450
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 62/128 (48%), Gaps = 3/128 (2%)
Query: 159 GGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLH 218
G S + HMF K +T SD +P++ AE FP LD L +D +
Sbjct: 112 AGASSGSIEREHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSSNEKGLLLNFEDRN 170
Query: 219 GVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLR--GKDGELRLGIRRSVQP 276
G WRFR+ Y + +++T GWS FV +K L +GD V F R G+ G+ RL I +P
Sbjct: 171 GKLWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGESGKHRLYIDWRRRP 230
Query: 277 RNGLPDSI 284
P S
Sbjct: 231 NAPDPTSF 238
>gi|240255717|ref|NP_192059.4| AP2/B3-like transcriptional factor family protein [Arabidopsis
thaliana]
gi|334302839|sp|O82595.2|NGA4_ARATH RecName: Full=B3 domain-containing transcription factor NGA4;
AltName: Full=Protein NGATHA 4
gi|332656633|gb|AEE82033.1| AP2/B3-like transcriptional factor family protein [Arabidopsis
thaliana]
Length = 333
Score = 68.9 bits (167), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
HMF K LT SD +P++ AE+ FP D + L +D +G WRFR+ Y
Sbjct: 34 HMFDKVLTPSDVGKLNRLVIPKQHAENFFPLEDNQN---GTVLDFQDKNGKMWRFRYSYW 90
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRG 261
+ +++T GWS FV +K L +GD V F RG
Sbjct: 91 NSSQSYVMTKGWSRFVKEKKLFAGDTVSFYRG 122
>gi|3695373|gb|AAC62776.1| F11O4.9 [Arabidopsis thaliana]
gi|7268193|emb|CAB77720.1| putative DNA-binding protein [Arabidopsis thaliana]
gi|119360095|gb|ABL66776.1| At4g01500 [Arabidopsis thaliana]
gi|225898755|dbj|BAH30508.1| hypothetical protein [Arabidopsis thaliana]
gi|227060729|gb|ACP18974.1| NGATHA4 [Arabidopsis thaliana]
Length = 328
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
HMF K LT SD +P++ AE+ FP D + L +D +G WRFR+ Y
Sbjct: 29 HMFDKVLTPSDVGKLNRLVIPKQHAENFFPLEDNQN---GTVLDFQDKNGKMWRFRYSYW 85
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRG 261
+ +++T GWS FV +K L +GD V F RG
Sbjct: 86 NSSQSYVMTKGWSRFVKEKKLFAGDTVSFYRG 117
>gi|414585760|tpg|DAA36331.1| TPA: hypothetical protein ZEAMMB73_124394 [Zea mays]
Length = 409
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 50/98 (51%), Gaps = 1/98 (1%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
HMF K +T SD +P++ AE FP LD Q L +D G WRFR+ Y
Sbjct: 92 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGQLLSFEDRAGKLWRFRYSYW 150
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELR 267
+ +++T GWS FV +K L +GD V F RG R
Sbjct: 151 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRGAGDTAR 188
>gi|304308185|gb|ADL70405.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 188
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 62/126 (49%), Gaps = 30/126 (23%)
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
V++ V NA TK MF+V Y PR M+FE +D E
Sbjct: 6 VIASVVNAFKTKCMFNVVYKPR----------------------------MQFEGNDFSE 37
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS 413
+R +G + G+ D+ P+ W +S+WR L V+WDE QVSPW+I+ + +S QS
Sbjct: 38 KRYDGTIIGVNDMSPH-WKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSSDIS-QS 95
Query: 414 SPRMKK 419
S + KK
Sbjct: 96 SLKKKK 101
>gi|308080706|ref|NP_001183918.1| uncharacterized protein LOC100502511 [Zea mays]
gi|238015438|gb|ACR38754.1| unknown [Zea mays]
gi|413938267|gb|AFW72818.1| hypothetical protein ZEAMMB73_941356 [Zea mays]
Length = 422
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 58/115 (50%), Gaps = 5/115 (4%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
HMF K +T SD +P++ AE FP LD L +D G WRFR+ Y
Sbjct: 99 HMFDKVVTPSDVGKLNRLVIPKQYAEKYFP-LDAAANEKGLLLSFEDSAGKHWRFRYSYW 157
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLR--GKDGELRLGI--RRSVQPRNGL 280
+ +++T GWS FV +K LV+GD V F R +D RL I +R V R L
Sbjct: 158 NSSQSYVMTKGWSRFVKEKRLVAGDTVSFSRAAAEDARHRLFIDWKRRVDTRGPL 212
>gi|164458456|gb|ABY57635.1| RAV2 [Solanum lycopersicum]
Length = 395
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 55/105 (52%), Gaps = 1/105 (0%)
Query: 166 KSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFR 225
K+ +F K +T SD +P++ AE FP L L +DL+G WRFR
Sbjct: 201 KAREQLFEKVVTPSDVGKLNRLVIPKQHAEKHFP-LQNGNNSKGVLLNFEDLNGKVWRFR 259
Query: 226 HIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGI 270
+ Y + ++LT GWS FV +KNL +GD V F R G+ +L I
Sbjct: 260 YSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFQRSTSGDKQLYI 304
>gi|304308201|gb|ADL70413.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 180
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 61/126 (48%), Gaps = 30/126 (23%)
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
V++ V NA TK MF+V Y PR M+FE D E
Sbjct: 1 VIASVVNAFKTKCMFNVVYKPR----------------------------MQFEGKDFSE 32
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS 413
+R +G + G+ D+ P+ W +S+WR L V+WDE QVSPW+I+ + +S QS
Sbjct: 33 KRYDGTIIGVNDMSPH-WKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSSDIS-QS 90
Query: 414 SPRMKK 419
S + KK
Sbjct: 91 SLKKKK 96
>gi|297843018|ref|XP_002889390.1| hypothetical protein ARALYDRAFT_470180 [Arabidopsis lyrata subsp.
lyrata]
gi|297335232|gb|EFH65649.1| hypothetical protein ARALYDRAFT_470180 [Arabidopsis lyrata subsp.
lyrata]
Length = 354
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 164 PTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWR 223
P HMF K +T SD +P++ AE FP LD + L +D +G WR
Sbjct: 45 PPPEKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDSSNNQNGTLLNFQDRNGKMWR 103
Query: 224 FRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRG 261
FR+ Y + +++T GWS FV +K L +GD V F RG
Sbjct: 104 FRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRG 141
>gi|413948352|gb|AFW81001.1| putative AP2/EREBP transcription factor superfamily protein [Zea
mays]
Length = 375
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 60/115 (52%), Gaps = 1/115 (0%)
Query: 163 SPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEW 222
SP + H+F KT+T SD +P++ AE FP L Q + L +D G W
Sbjct: 197 SPAAAREHLFDKTVTPSDVGKLNRLVIPKQHAERHFP-LRRVQGGRAPILSFEDAAGKAW 255
Query: 223 RFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPR 277
RFR+ Y + ++LT GWS FV +K L +GDAV F R +L I ++P+
Sbjct: 256 RFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDAVGFYRSAAAGRQLFIDCKLRPK 310
>gi|115450383|ref|NP_001048792.1| Os03g0120900 [Oryza sativa Japonica Group]
gi|75246354|sp|Q8LMR9.1|Y3209_ORYSJ RecName: Full=B3 domain-containing protein Os03g0120900
gi|21426118|gb|AAM52315.1|AC105363_4 Putative RAV-like B3 domain DNA binding protein [Oryza sativa
Japonica Group]
gi|108705902|gb|ABF93697.1| B3 DNA binding domain containing protein, expressed [Oryza sativa
Japonica Group]
gi|113547263|dbj|BAF10706.1| Os03g0120900 [Oryza sativa Japonica Group]
Length = 311
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
Query: 154 GVDEEGGGRS-PTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQEL 212
G +E GGRS HMF K +T SD +P++ AE FP LD L
Sbjct: 18 GEVQESGGRSLAAVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAASNEKGLLL 76
Query: 213 VAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRG----KDGELRL 268
+D G WRFR+ Y + +++T GWS FV +K L +GD V F RG G L +
Sbjct: 77 SFEDRTGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGVGEAARGRLFI 136
Query: 269 GIRR 272
RR
Sbjct: 137 DWRR 140
>gi|304308183|gb|ADL70404.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 203
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 61/126 (48%), Gaps = 30/126 (23%)
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
V++ V NA TK MF+V Y PR M+FE D E
Sbjct: 7 VIASVVNAFKTKCMFNVVYKPR----------------------------MQFEGKDFSE 38
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS 413
+R +G + G+ D+ P+ W +S+WR L V+WDE QVSPW+I+ + +S QS
Sbjct: 39 KRYDGTIIGVNDMSPH-WKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSSDIS-QS 96
Query: 414 SPRMKK 419
S + KK
Sbjct: 97 SLKKKK 102
>gi|125542174|gb|EAY88313.1| hypothetical protein OsI_09772 [Oryza sativa Indica Group]
Length = 308
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
Query: 154 GVDEEGGGRS-PTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQEL 212
G +E GGRS HMF K +T SD +P++ AE FP LD L
Sbjct: 18 GEVQESGGRSLAAVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAASNEKGLLL 76
Query: 213 VAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRG----KDGELRL 268
+D G WRFR+ Y + +++T GWS FV +K L +GD V F RG G L +
Sbjct: 77 SFEDRTGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGVGEAARGRLFI 136
Query: 269 GIRR 272
RR
Sbjct: 137 DWRR 140
>gi|225426506|ref|XP_002271695.1| PREDICTED: B3 domain-containing protein Os03g0120900-like [Vitis
vinifera]
Length = 411
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 59/117 (50%), Gaps = 3/117 (2%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
HMF K +T SD +P++ AE FP LD L +D G WRFR+ Y
Sbjct: 110 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSANEKGLLLNFEDRSGKPWRFRYSYW 168
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLR--GKDGELRLGIRRSVQPRNGLPDSI 284
+ +++T GWS FV +K L +GD V F R G+ G+ RL I +P P S+
Sbjct: 169 NSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGESGKDRLYIDWRRRPDAPEPSSL 225
>gi|284930237|gb|ADC31716.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 189
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 61/126 (48%), Gaps = 30/126 (23%)
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
V++ V NA TK MF+V Y PR M+FE D E
Sbjct: 8 VIASVVNAFKTKCMFNVVYKPR----------------------------MQFEGKDFSE 39
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS 413
+R +G + G+ D+ P+ W +S+WR L V+WDE QVSPW+I+ + +S QS
Sbjct: 40 KRYDGTIIGVNDMSPH-WKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSSDIS-QS 97
Query: 414 SPRMKK 419
S + KK
Sbjct: 98 SLKKKK 103
>gi|15223284|ref|NP_171611.1| B3 domain-containing transcription factor NGA3 [Arabidopsis
thaliana]
gi|75192354|sp|Q9MAN1.1|NGA3_ARATH RecName: Full=B3 domain-containing transcription factor NGA3;
AltName: Full=Protein NGATHA3
gi|6715649|gb|AAF26476.1|AC007323_17 T25K16.3 [Arabidopsis thaliana]
gi|227060706|gb|ACP18973.1| NGATHA3 [Arabidopsis thaliana]
gi|332189098|gb|AEE27219.1| B3 domain-containing transcription factor NGA3 [Arabidopsis
thaliana]
Length = 358
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 51/98 (52%), Gaps = 1/98 (1%)
Query: 164 PTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWR 223
P HMF K +T SD +P++ AE FP LD + L +D +G WR
Sbjct: 48 PPPEKEHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDSSNNQNGTLLNFQDRNGKMWR 106
Query: 224 FRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRG 261
FR+ Y + +++T GWS FV +K L +GD V F RG
Sbjct: 107 FRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRG 144
>gi|147768788|emb|CAN73636.1| hypothetical protein VITISV_009603 [Vitis vinifera]
Length = 505
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 59/117 (50%), Gaps = 3/117 (2%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
HMF K +T SD +P++ AE FP LD L +D G WRFR+ Y
Sbjct: 110 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSANEKGLLLNFEDRSGKPWRFRYSYW 168
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLR--GKDGELRLGIRRSVQPRNGLPDSI 284
+ +++T GWS FV +K L +GD V F R G+ G+ RL I +P P S+
Sbjct: 169 NSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGESGKDRLYIDWRRRPDAPEPSSL 225
>gi|304308191|gb|ADL70408.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 183
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 61/126 (48%), Gaps = 30/126 (23%)
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
V++ V NA TK MF+V Y PR M+FE D E
Sbjct: 7 VIASVVNAFKTKCMFNVVYKPR----------------------------MQFEGKDFSE 38
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS 413
+R +G + G+ D+ P+ W +S+WR L V+WDE QVSPW+I+ + +S QS
Sbjct: 39 KRYDGTIIGVNDMSPH-WKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSSDIS-QS 96
Query: 414 SPRMKK 419
S + KK
Sbjct: 97 SLKKKK 102
>gi|304308193|gb|ADL70409.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 173
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 61/126 (48%), Gaps = 30/126 (23%)
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
V++ V NA TK MF+V Y PR M+FE D E
Sbjct: 8 VIASVVNAFKTKCMFNVVYKPR----------------------------MQFEGKDFSE 39
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS 413
+R +G + G+ D+ P+ W +S+WR L V+WDE QVSPW+I+ + +S QS
Sbjct: 40 KRYDGTIIGVNDMSPH-WKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSSDIS-QS 97
Query: 414 SPRMKK 419
S + KK
Sbjct: 98 SLKKKK 103
>gi|358347636|ref|XP_003637862.1| Maturase K [Medicago truncatula]
gi|355503797|gb|AES85000.1| Maturase K [Medicago truncatula]
Length = 624
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 63/125 (50%), Gaps = 8/125 (6%)
Query: 155 VDEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVA 214
V +E + T HMF K +T SD +P++ AE FP LD L
Sbjct: 155 VPQEQEQQPSTHEKEHMFDKAVTPSDVGKLNRLVIPKQHAEKYFP-LDSTSNEKGLLLNF 213
Query: 215 KDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGEL---RLGI- 270
+D +G WRFR+ Y + +++T GWS FV +K L +GD V F RG GEL RL I
Sbjct: 214 EDRNGKLWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGV-GELFRHRLFID 272
Query: 271 --RRS 273
RRS
Sbjct: 273 WRRRS 277
>gi|304308203|gb|ADL70414.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 188
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 61/126 (48%), Gaps = 30/126 (23%)
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
V++ V NA TK MF+V Y PR M+FE D E
Sbjct: 6 VIASVVNAFKTKCMFNVVYKPR----------------------------MQFEGKDFSE 37
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS 413
+R +G + G+ D+ P+ W +S+WR L V+WDE QVSPW+I+ + +S QS
Sbjct: 38 KRYDGTIIGVNDMSPH-WKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSSNIS-QS 95
Query: 414 SPRMKK 419
S + KK
Sbjct: 96 SLKKKK 101
>gi|297844230|ref|XP_002889996.1| hypothetical protein ARALYDRAFT_888685 [Arabidopsis lyrata subsp.
lyrata]
gi|297335838|gb|EFH66255.1| hypothetical protein ARALYDRAFT_888685 [Arabidopsis lyrata subsp.
lyrata]
Length = 344
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 2/118 (1%)
Query: 154 GVDEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELV 213
G+ +G + +S +F K +T SD +P+ AE FP L
Sbjct: 170 GLSNDGVSTTEFRSAEALFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLN 229
Query: 214 AKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLR--GKDGELRLG 269
+D++G WRFR+ Y + ++LT GWS FV +KNL +GD V F R G+D +L +G
Sbjct: 230 FEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIG 287
>gi|304308207|gb|ADL70416.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 187
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 61/126 (48%), Gaps = 30/126 (23%)
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
V++ V NA TK MF+V Y PR M+FE D E
Sbjct: 6 VIASVVNAFKTKCMFNVVYKPR----------------------------MQFEGKDFSE 37
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS 413
+R +G + G+ D+ P+ W +S+WR L V+WDE QVSPW+I+ + +S QS
Sbjct: 38 KRYDGTIIGVNDMSPH-WKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSSDIS-QS 95
Query: 414 SPRMKK 419
S + KK
Sbjct: 96 SLKKKK 101
>gi|284930239|gb|ADC31717.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 176
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 61/126 (48%), Gaps = 30/126 (23%)
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
V++ V NA TK MF+V Y PR M+FE D E
Sbjct: 8 VIASVVNAFKTKCMFNVVYKPR----------------------------MQFEGKDFSE 39
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS 413
+R +G + G+ D+ P+ W +S+WR L V+WDE QVSPW+I+ + +S QS
Sbjct: 40 KRYDGTIIGVNDMSPH-WKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLIPSSNIS-QS 97
Query: 414 SPRMKK 419
S + KK
Sbjct: 98 SLKKKK 103
>gi|194475604|gb|ACF74549.1| RAV [Nicotiana tabacum]
Length = 385
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 60/118 (50%), Gaps = 7/118 (5%)
Query: 166 KSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFR 225
K+ +F K +T SD +P++ AE FP L L +DL+G WRFR
Sbjct: 192 KAREQLFEKAVTPSDVGKLNRLVIPKQHAEKHFP-LQNGNTSKGVLLNFEDLNGKVWRFR 250
Query: 226 HIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLR--GKDGELRLGIRRSVQPRNGLP 281
+ Y + ++LT GWS FV +KNL +GD V F R G+D +L + + RN P
Sbjct: 251 YSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFQRSTGEDKQLYIDFK----ARNATP 304
>gi|297742476|emb|CBI34625.3| unnamed protein product [Vitis vinifera]
Length = 380
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 59/117 (50%), Gaps = 3/117 (2%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
HMF K +T SD +P++ AE FP LD L +D G WRFR+ Y
Sbjct: 155 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSANEKGLLLNFEDRSGKPWRFRYSYW 213
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLR--GKDGELRLGIRRSVQPRNGLPDSI 284
+ +++T GWS FV +K L +GD V F R G+ G+ RL I +P P S+
Sbjct: 214 NSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRGVGESGKDRLYIDWRRRPDAPEPSSL 270
>gi|255566851|ref|XP_002524409.1| DNA-binding protein RAV1, putative [Ricinus communis]
gi|223536370|gb|EEF38020.1| DNA-binding protein RAV1, putative [Ricinus communis]
Length = 371
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 61/121 (50%), Gaps = 3/121 (2%)
Query: 159 GGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLH 218
G R K+ +F K +T SD +P++ AE FP L +D+
Sbjct: 191 GSERIIMKAREQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSGSNSTKGVLLNFEDIT 250
Query: 219 GVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLR--GKDGELRLGIR-RSVQ 275
G WRFR+ Y + ++LT GWS FV +KNL +GD V FL+ G D +L + + R++
Sbjct: 251 GKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVRFLKSTGPDKQLYIDWKVRTLT 310
Query: 276 P 276
P
Sbjct: 311 P 311
>gi|293335159|ref|NP_001169304.1| uncharacterized protein LOC100383168 [Zea mays]
gi|224028527|gb|ACN33339.1| unknown [Zea mays]
Length = 372
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 79/180 (43%), Gaps = 19/180 (10%)
Query: 359 VVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMK 418
+V ++++DP +WP SKWR L+VRW++ + + Q++VSPWEI+ + ++ S
Sbjct: 1 MVVHVSEIDPMKWPGSKWRSLLVRWEDGVECNGQDRVSPWEIEIAGGSVSVAHSVSASSS 60
Query: 419 KLRTGLQAPPPDYPVSARGGGVLDFEESVRSSKVLQGQENVGFVSPLYGCDTVNHPLGFE 478
K D P G G D E+ + +VLQGQ+ + F T + P +
Sbjct: 61 KRTKLCPQGNLDVPTMWNGNGCTDSVETGKFPRVLQGQDLMSF-------RTRHVPSAPQ 113
Query: 479 MRAPAHQSLALNGIRKDNINELVRALPTSY------------TGFVESNRFPKVLQGQEI 526
A + N PTS GF ES F +VLQGQEI
Sbjct: 114 TVEAAKLQSSGASRFLSNARGCALGGPTSRLAVHNSDFTYQSVGFNESIGFSEVLQGQEI 173
>gi|15222217|ref|NP_172784.1| AP2/ERF and B3 domain-containing transcription factor RAV1
[Arabidopsis thaliana]
gi|25091118|sp|Q9ZWM9.1|RAV1_ARATH RecName: Full=AP2/ERF and B3 domain-containing transcription factor
RAV1; AltName: Full=Ethylene-responsive transcription
factor RAV1; AltName: Full=Protein RELATED TO ABI3/VP1 1
gi|9958065|gb|AAG09554.1|AC011810_13 DNA binding protein RAV1 [Arabidopsis thaliana]
gi|3868857|dbj|BAA34250.1| RAV1 [Arabidopsis thaliana]
gi|17380762|gb|AAL36211.1| putative DNA-binding protein RAV1 [Arabidopsis thaliana]
gi|20259029|gb|AAM14230.1| putative DNA-binding protein RAV1 [Arabidopsis thaliana]
gi|332190870|gb|AEE28991.1| AP2/ERF and B3 domain-containing transcription factor RAV1
[Arabidopsis thaliana]
Length = 344
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 2/118 (1%)
Query: 154 GVDEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELV 213
G+ +G + +S +F K +T SD +P+ AE FP L
Sbjct: 170 GLSNDGVSTTGFRSAEALFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLN 229
Query: 214 AKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLR--GKDGELRLG 269
+D++G WRFR+ Y + ++LT GWS FV +KNL +GD V F R G+D +L +G
Sbjct: 230 FEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIG 287
>gi|304308195|gb|ADL70410.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 168
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 61/126 (48%), Gaps = 32/126 (25%)
Query: 295 LSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPER 354
++ V NA TK MF+V Y PR M+FE D E+
Sbjct: 1 IASVVNAFKTKCMFNVVYKPR----------------------------MQFEGKDFSEK 32
Query: 355 RCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSI-QS 413
R +G + G+ D+ P+ W +S+WR L V+WDE QVSPW+I+ + P L I QS
Sbjct: 33 RYDGTIIGVNDMSPH-WKDSEWRSLKVQWDELSPFLRPNQVSPWDIEHLI--PSLDISQS 89
Query: 414 SPRMKK 419
S + KK
Sbjct: 90 SLKKKK 95
>gi|304307967|gb|ADL70296.1| auxin response factor 3 [Arabidopsis thaliana]
Length = 239
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 69/152 (45%), Gaps = 31/152 (20%)
Query: 383 WDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGGVLD 442
WD+ + + HQ++VSPWEI+ S S+ + K+ R G + PD PVS G D
Sbjct: 1 WDDIVANGHQQRVSPWEIEPSGSISNSGSFVTTGPKRSRIGFSSGKPDIPVS-EGIRATD 59
Query: 443 FEESVRSSKVLQGQENV-GFVSPLYGCDTVNHPLGFEMRAPAHQSLALNGIRKDNINELV 501
FEES+R +VLQGQE GF++ S G R+
Sbjct: 60 FEESLRFQRVLQGQEIFPGFINTC--------------------SDGGAGARRGRFKG-- 97
Query: 502 RALPTSYTGFVESNRFPKVLQGQEICPLRSLT 533
T F +S F KVLQGQE P S+T
Sbjct: 98 -------TEFGDSYGFHKVLQGQETVPAYSIT 122
>gi|304307961|gb|ADL70293.1| auxin response factor 3 [Arabidopsis thaliana]
gi|304307965|gb|ADL70295.1| auxin response factor 3 [Arabidopsis thaliana]
Length = 239
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 69/152 (45%), Gaps = 31/152 (20%)
Query: 383 WDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGGVLD 442
WD+ + + HQ++VSPWEI+ S S+ + K+ R G + PD PVS G D
Sbjct: 1 WDDIVANGHQQRVSPWEIEPSGSISNSGSFVTTGPKRSRIGFSSGKPDIPVS-EGICATD 59
Query: 443 FEESVRSSKVLQGQENV-GFVSPLYGCDTVNHPLGFEMRAPAHQSLALNGIRKDNINELV 501
FEES+R +VLQGQE GF++ S G R+
Sbjct: 60 FEESLRFQRVLQGQEIFPGFINTC--------------------SDGGAGARRGRFKG-- 97
Query: 502 RALPTSYTGFVESNRFPKVLQGQEICPLRSLT 533
T F +S F KVLQGQE P S+T
Sbjct: 98 -------TEFGDSYGFHKVLQGQETVPAYSIT 122
>gi|297814185|ref|XP_002874976.1| hypothetical protein ARALYDRAFT_912083 [Arabidopsis lyrata subsp.
lyrata]
gi|297320813|gb|EFH51235.1| hypothetical protein ARALYDRAFT_912083 [Arabidopsis lyrata subsp.
lyrata]
Length = 332
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
HMF K LT SD +P++ AE+ FP L+ Q L +D +G WRFR+ Y
Sbjct: 32 HMFDKVLTPSDVGKLNRLVIPKQHAENYFP-LEGNQN--GTVLDFQDRNGKMWRFRYSYW 88
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRG 261
+ +++T GWS FV +K L +GD V F RG
Sbjct: 89 NSSQSYVMTKGWSRFVKEKKLFAGDTVSFHRG 120
>gi|225453662|ref|XP_002268399.1| PREDICTED: B3 domain-containing transcription factor NGA1-like
[Vitis vinifera]
Length = 461
Score = 67.0 bits (162), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 59/117 (50%), Gaps = 3/117 (2%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
HMF K +T SD +P++ AE FP LD L +D G WRFR+ Y
Sbjct: 137 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSASDKGLLLNFEDRDGKPWRFRYSYW 195
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLR--GKDGELRLGIRRSVQPRNGLPDSI 284
+ +++T GWS FV +K L +GD V F R G+ G+ RL I +P P S+
Sbjct: 196 NSSQSYVMTKGWSRFVKEKKLDAGDIVSFERGVGESGKDRLYIDWRRRPDAPDPTSL 252
>gi|125552982|gb|EAY98691.1| hypothetical protein OsI_20621 [Oryza sativa Indica Group]
Length = 102
Score = 66.6 bits (161), Expect = 5e-08, Method: Composition-based stats.
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 60 ELWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQL 119
ELWHACAGP +LP++G+ +VY PQ HL A + P + C+VV V+L
Sbjct: 23 ELWHACAGPGVALPRRGSALVYLPQAHL--AADGGGGEVPPAGAAAVPPHVACRVVGVEL 80
Query: 120 LANKENDEVYTQVALLPQPEL 140
A+ DEVY ++AL+ + E+
Sbjct: 81 RADAATDEVYARLALVAEGEV 101
>gi|242078245|ref|XP_002443891.1| hypothetical protein SORBIDRAFT_07g003880 [Sorghum bicolor]
gi|241940241|gb|EES13386.1| hypothetical protein SORBIDRAFT_07g003880 [Sorghum bicolor]
Length = 253
Score = 66.6 bits (161), Expect = 5e-08, Method: Composition-based stats.
Identities = 37/95 (38%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
HMF K LT SD VP++ AE FP Q L +D G W+FR+ Y
Sbjct: 55 HMFDKVLTPSDVGKLNRLVVPKQHAERFFPAAGAGTQ-----LCFQDCGGALWQFRYSYW 109
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDG 264
G + +++T GWS FV L +GD V F RG G
Sbjct: 110 GSSQSYVMTKGWSRFVRAARLAAGDTVTFSRGAGG 144
>gi|118482046|gb|ABK92954.1| unknown [Populus trichocarpa]
Length = 45
Score = 66.2 bits (160), Expect = 6e-08, Method: Composition-based stats.
Identities = 30/36 (83%), Positives = 32/36 (88%), Gaps = 1/36 (2%)
Query: 748 EFCNEVSKIHIYTQEEVEKMTIGTT-DDTQSCLDQA 782
EFCN +KIHIYTQEEVEKMT+G T DDTQSCLDQA
Sbjct: 9 EFCNVATKIHIYTQEEVEKMTVGITGDDTQSCLDQA 44
>gi|356522464|ref|XP_003529866.1| PREDICTED: B3 domain-containing protein Os03g0120900-like [Glycine
max]
Length = 421
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
HMF K +T SD +P++ AE FP LD L +D +G WRFR+ Y
Sbjct: 59 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSANEKGLLLNFEDRNGKLWRFRYSYW 117
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGEL 266
+ +++T GWS FV +K L +GD V F RG GEL
Sbjct: 118 NSSQSYVMTKGWSRFVKEKKLDAGDMVSFQRGV-GEL 153
>gi|304307953|gb|ADL70289.1| auxin response factor 3 [Arabidopsis thaliana]
Length = 239
Score = 66.2 bits (160), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 69/152 (45%), Gaps = 31/152 (20%)
Query: 383 WDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGGVLD 442
WD+ + + HQ++VSPWEI+ S S+ + K+ R G + PD PVS G D
Sbjct: 1 WDDIVANGHQQRVSPWEIEPSGSISNSGSFVTTGPKRSRIGFSSGKPDIPVS-EGIRATD 59
Query: 443 FEESVRSSKVLQGQENV-GFVSPLYGCDTVNHPLGFEMRAPAHQSLALNGIRKDNINELV 501
FEES+R +VLQGQE GF++ + G R+
Sbjct: 60 FEESLRFQRVLQGQEIFPGFINTC--------------------ADGGAGARRGRFKG-- 97
Query: 502 RALPTSYTGFVESNRFPKVLQGQEICPLRSLT 533
T F +S F KVLQGQE P S+T
Sbjct: 98 -------TEFGDSYGFHKVLQGQETVPAYSIT 122
>gi|304307971|gb|ADL70298.1| auxin response factor 3 [Arabidopsis thaliana]
Length = 239
Score = 66.2 bits (160), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 68/152 (44%), Gaps = 31/152 (20%)
Query: 383 WDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGGVLD 442
WD+ + + HQ++VSPWEI+ S S+ + K+ R G + PD PVS G D
Sbjct: 1 WDDIVANGHQQRVSPWEIEPSGSISNSGSFVTTGPKRSRIGFSSGKPDIPVS-EGIRATD 59
Query: 443 FEESVRSSKVLQGQENV-GFVSPLYGCDTVNHPLGFEMRAPAHQSLALNGIRKDNINELV 501
FEES+R +VLQGQE GF++ G R+
Sbjct: 60 FEESLRFQRVLQGQEIFPGFINTCLDGGA--------------------GARRGRFKG-- 97
Query: 502 RALPTSYTGFVESNRFPKVLQGQEICPLRSLT 533
T F +S F KVLQGQE P S+T
Sbjct: 98 -------TEFGDSYGFHKVLQGQETVPAYSIT 122
>gi|296089028|emb|CBI38731.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 59/117 (50%), Gaps = 3/117 (2%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
HMF K +T SD +P++ AE FP LD L +D G WRFR+ Y
Sbjct: 93 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSASDKGLLLNFEDRDGKPWRFRYSYW 151
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLR--GKDGELRLGIRRSVQPRNGLPDSI 284
+ +++T GWS FV +K L +GD V F R G+ G+ RL I +P P S+
Sbjct: 152 NSSQSYVMTKGWSRFVKEKKLDAGDIVSFERGVGESGKDRLYIDWRRRPDAPDPTSL 208
>gi|242080967|ref|XP_002445252.1| hypothetical protein SORBIDRAFT_07g006880 [Sorghum bicolor]
gi|241941602|gb|EES14747.1| hypothetical protein SORBIDRAFT_07g006880 [Sorghum bicolor]
Length = 279
Score = 65.9 bits (159), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 3/95 (3%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQE--LVAKDLH-GVEWRFRH 226
++F K LTASD +PR+ AE+CFP + + E L +D+ G+ W FR
Sbjct: 77 YLFSKILTASDVGKLNRLLIPRQCAEECFPKISKTKSAEDDEDFLNFEDMSTGLIWCFRF 136
Query: 227 IYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRG 261
+ ++LT GW F+ +KNL GD + F RG
Sbjct: 137 CLWNNSKTYVLTKGWHFFIKEKNLKKGDVLSFYRG 171
>gi|242076896|ref|XP_002448384.1| hypothetical protein SORBIDRAFT_06g026370 [Sorghum bicolor]
gi|241939567|gb|EES12712.1| hypothetical protein SORBIDRAFT_06g026370 [Sorghum bicolor]
Length = 420
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
HMF K +T SD +P++ AE FP LD L +D G WRFR+ Y
Sbjct: 98 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRAGKLWRFRYSYW 156
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRG 261
+ +++T GWS FV +K L +GD V F RG
Sbjct: 157 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 188
>gi|304308187|gb|ADL70406.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 190
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 60/126 (47%), Gaps = 30/126 (23%)
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
V++ V NA TK MF+V Y PR M+FE D E
Sbjct: 8 VIASVVNAFKTKCMFNVVYKPR----------------------------MQFEGKDFSE 39
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS 413
+R +G + G+ D+ P+ W +S+WR L V+WDE QV PW+I+ + +S QS
Sbjct: 40 KRYDGTIIGVNDMSPH-WKDSEWRSLKVQWDELSPFLRPNQVLPWDIEHLIPSSDIS-QS 97
Query: 414 SPRMKK 419
S + KK
Sbjct: 98 SLKKKK 103
>gi|413919134|gb|AFW59066.1| hypothetical protein ZEAMMB73_672691 [Zea mays]
Length = 404
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
HMF K +T SD +P++ AE FP LD L +D G WRFR+ Y
Sbjct: 85 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRAGKLWRFRYSYW 143
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELR 267
+ +++T GWS FV +K L +GD V F RG R
Sbjct: 144 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRGAADAAR 181
>gi|304308199|gb|ADL70412.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 190
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 59/128 (46%), Gaps = 29/128 (22%)
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
V++ V NA TK MF+V Y PR M+FE D E
Sbjct: 8 VIASVVNAFKTKCMFNVVYKPR----------------------------MQFEGKDFSE 39
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS 413
+R +G + G+ D+ P+ W +S+W+ L V+WDE QVSPW+I+ + +S S
Sbjct: 40 KRYDGTIIGVNDMSPH-WKDSEWQSLKVQWDELSPFLRPNQVSPWDIEHLIPSSDISQSS 98
Query: 414 SPRMKKLR 421
+ K R
Sbjct: 99 LKKEKHWR 106
>gi|304308197|gb|ADL70411.1| auxin response factor 13 [Arabidopsis thaliana]
Length = 175
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 60/126 (47%), Gaps = 30/126 (23%)
Query: 294 VLSVVANAVSTKSMFHVFYSPRATHADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPE 353
V++ V NA TK MF+V Y PR M+FE D E
Sbjct: 8 VIASVVNAFKTKCMFNVVYKPR----------------------------MQFEGKDFSE 39
Query: 354 RRCNGVVTGITDLDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQS 413
+R +G + G+ D+ P+ W +S+WR L V+WDE QV PW+I+ + +S QS
Sbjct: 40 KRYDGTIIGVNDMSPH-WKDSEWRSLKVQWDELSPFLRPNQVLPWDIEHLIPSSDIS-QS 97
Query: 414 SPRMKK 419
S + KK
Sbjct: 98 SLKKKK 103
>gi|449507228|ref|XP_004162969.1| PREDICTED: uncharacterized protein LOC101232454 [Cucumis sativus]
Length = 347
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
HMF K +T SD +P++ AE FP LD L +D +G WRFR+ Y
Sbjct: 55 HMFDKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSTNDKGLLLNFEDRNGKSWRFRYSYW 113
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRG 261
+ +++T GWS FV +K L +GD V F RG
Sbjct: 114 NSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRG 145
>gi|326491285|dbj|BAK05742.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 397
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
HMF K +T SD +P++ AE FP LD L +D G WRFR+ Y
Sbjct: 88 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRGGKLWRFRYSYW 146
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELR 267
+ +++T GWS FV +K L +GD V F RG R
Sbjct: 147 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRGAADATR 184
>gi|449456452|ref|XP_004145963.1| PREDICTED: uncharacterized protein LOC101211271 [Cucumis sativus]
Length = 336
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
HMF K +T SD +P++ AE FP LD L +D +G WRFR+ Y
Sbjct: 55 HMFDKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSTNDKGLLLNFEDRNGKSWRFRYSYW 113
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRG 261
+ +++T GWS FV +K L +GD V F RG
Sbjct: 114 NSSQSYVMTKGWSRFVKEKRLDAGDIVSFQRG 145
>gi|242042451|ref|XP_002468620.1| hypothetical protein SORBIDRAFT_01g049150 [Sorghum bicolor]
gi|241922474|gb|EER95618.1| hypothetical protein SORBIDRAFT_01g049150 [Sorghum bicolor]
Length = 330
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
HMF K +T SD +P++ AE FP LD L +D G WRFR+ Y
Sbjct: 37 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRTGKPWRFRYSYW 95
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRG----KDGELRLGIRRSVQP 276
+ +++T GWS FV +K L +GD V F RG G L + RR P
Sbjct: 96 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGVGDAARGRLFIDWRRRPDP 146
>gi|356560217|ref|XP_003548390.1| PREDICTED: B3 domain-containing transcription factor NGA1-like
[Glycine max]
Length = 420
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 53/102 (51%), Gaps = 2/102 (1%)
Query: 160 GGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHG 219
G + P + HMF K +T SD +P++ AE FP LD L +D +G
Sbjct: 22 GAQQPAEKE-HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSANEKGLLLNFEDRNG 79
Query: 220 VEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRG 261
WRFR+ Y + +++T GWS FV +K L +GD V F RG
Sbjct: 80 KLWRFRYSYWNSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRG 121
>gi|357165429|ref|XP_003580380.1| PREDICTED: B3 domain-containing protein Os02g0683500-like
[Brachypodium distachyon]
Length = 413
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
HMF K +T SD +P++ AE FP LD L +D G WRFR+ Y
Sbjct: 98 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYSYW 156
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRG 261
+ +++T GWS FV +K L +GD V F RG
Sbjct: 157 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 188
>gi|414867524|tpg|DAA46081.1| TPA: hypothetical protein ZEAMMB73_334184 [Zea mays]
Length = 273
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 50/103 (48%), Gaps = 11/103 (10%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQE-----------LVAKDLH 218
HMF K +T SD +P++ AE FP LD S L +D
Sbjct: 28 HMFEKVVTPSDVGKLNRLVIPKQHAERYFPALDASAAAASASASAGGGKAGLVLSFEDRA 87
Query: 219 GVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRG 261
G WRFR+ Y + +++T GWS FV +K L +GD VLF RG
Sbjct: 88 GKAWRFRYSYWNSSQSYVMTKGWSRFVKEKRLGAGDTVLFARG 130
>gi|297723391|ref|NP_001174059.1| Os04g0581400 [Oryza sativa Japonica Group]
gi|239983845|sp|Q7F9W2.2|Y4814_ORYSJ RecName: Full=B3 domain-containing protein Os04g0581400
gi|255675715|dbj|BAH92787.1| Os04g0581400 [Oryza sativa Japonica Group]
Length = 316
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
HMF K +T SD +P++ AE FP LD L +D G WRFR+ Y
Sbjct: 108 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYSYW 166
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRG 261
+ +++T GWS FV +K L +GD V F RG
Sbjct: 167 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 198
>gi|299882830|gb|ADJ57333.1| RAV-like 1 protein [Oryza sativa Japonica Group]
Length = 400
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
HMF K +T SD +P++ AE FP LD L +D G WRFR+ Y
Sbjct: 85 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYSYW 143
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRG 261
+ +++T GWS FV +K L +GD V F RG
Sbjct: 144 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 175
>gi|125549456|gb|EAY95278.1| hypothetical protein OsI_17101 [Oryza sativa Indica Group]
Length = 400
Score = 65.1 bits (157), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
HMF K +T SD +P++ AE FP LD L +D G WRFR+ Y
Sbjct: 85 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYSYW 143
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRG 261
+ +++T GWS FV +K L +GD V F RG
Sbjct: 144 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 175
>gi|32492293|emb|CAE04153.1| OSJNBa0088A01.1 [Oryza sativa Japonica Group]
Length = 293
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
HMF K +T SD +P++ AE FP LD L +D G WRFR+ Y
Sbjct: 85 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYSYW 143
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRG 261
+ +++T GWS FV +K L +GD V F RG
Sbjct: 144 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 175
>gi|56966891|pdb|1WID|A Chain A, Solution Structure Of The B3 Dna-Binding Domain Of Rav1
Length = 130
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 54/103 (52%), Gaps = 2/103 (1%)
Query: 171 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRG 230
+F K +T SD +P+ AE FP L +D++G WRFR+ Y
Sbjct: 13 LFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVNGKVWRFRYSYWN 72
Query: 231 QPRRHLLTTGWSIFVSQKNLVSGDAVLFLR--GKDGELRLGIR 271
+ ++LT GWS FV +KNL +GD V F R G+D +L +G +
Sbjct: 73 SSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSNGQDQQLYIGWK 115
>gi|326531600|dbj|BAJ97804.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 322
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 53/107 (49%), Gaps = 5/107 (4%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
HMF K +T SD +P++ AE FP LD L +D G WRFR+ Y
Sbjct: 38 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDASSTDKGLLLSFEDRAGKPWRFRYSYW 96
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRG----KDGELRLGIRR 272
+ +++T GWS FV +K L +GD V F RG G L + RR
Sbjct: 97 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGVGEAARGRLFIDWRR 143
>gi|413949070|gb|AFW81719.1| hypothetical protein ZEAMMB73_752087 [Zea mays]
Length = 259
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
HMF K +T SD +P++ AE FP LD L +D G WRFR+ Y
Sbjct: 38 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDAAANEKGLLLSFEDRTGKPWRFRYSYW 96
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRG 261
+ +++T GWS FV +K L +GD V F RG
Sbjct: 97 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRG 128
>gi|414864444|tpg|DAA43001.1| TPA: hypothetical protein ZEAMMB73_938349 [Zea mays]
Length = 327
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 54/111 (48%), Gaps = 5/111 (4%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
HMF K +T SD +P++ AE FP LD L +D G WRFR+ Y
Sbjct: 36 HMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDAAANDKGLLLSFEDRAGKPWRFRYSYW 94
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRG----KDGELRLGIRRSVQP 276
+ +++T GWS FV +K L +GD V F RG G L + RR P
Sbjct: 95 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGVGEAARGRLFIDWRRRPDP 145
>gi|356504205|ref|XP_003520889.1| PREDICTED: B3 domain-containing transcription factor NGA1-like
[Glycine max]
Length = 420
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
HMF K T SD +P++ AE FP LD L +D +G WRFR+ Y
Sbjct: 86 HMFEKVATPSDVGKLNRLVIPKQHAEKYFP-LDSSTNEKGLLLNFEDRNGKVWRFRYSYW 144
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRG 261
+ +++T GWS FV +K L +GD V F RG
Sbjct: 145 NSSQSYVMTKGWSRFVKEKKLDAGDIVSFQRG 176
>gi|125540696|gb|EAY87091.1| hypothetical protein OsI_08488 [Oryza sativa Indica Group]
Length = 411
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 49/96 (51%), Gaps = 1/96 (1%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
HMF K +T SD +P++ AE FP LD L +D G WRFR+ Y
Sbjct: 93 HMFDKVVTPSDVGKLNRLVIPKQYAEKYFP-LDAAANEKGLLLNFEDRAGKPWRFRYSYW 151
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGE 265
+ +++T GWS FV +K L +GD V F RG E
Sbjct: 152 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFSRGIGDE 187
>gi|115447949|ref|NP_001047754.1| Os02g0683500 [Oryza sativa Japonica Group]
gi|75122233|sp|Q6EU30.1|Y2835_ORYSJ RecName: Full=B3 domain-containing protein Os02g0683500
gi|50251902|dbj|BAD27840.1| RAV-like B3 domain DNA binding protein-like [Oryza sativa Japonica
Group]
gi|113537285|dbj|BAF09668.1| Os02g0683500 [Oryza sativa Japonica Group]
gi|215766728|dbj|BAG98956.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 412
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
HMF K +T SD +P++ AE FP LD L +D G WRFR+ Y
Sbjct: 94 HMFDKVVTPSDVGKLNRLVIPKQYAEKYFP-LDAAANEKGLLLNFEDRAGKPWRFRYSYW 152
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRG 261
+ +++T GWS FV +K L +GD V F RG
Sbjct: 153 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFSRG 184
>gi|357157529|ref|XP_003577828.1| PREDICTED: B3 domain-containing protein Os11g0156000-like
[Brachypodium distachyon]
Length = 277
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 52/107 (48%), Gaps = 5/107 (4%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
H+F K LT SD +P++ AE CFP L L D G WRFR+ Y
Sbjct: 36 HLFEKALTPSDVGKLNRLVIPKQHAERCFP-LGGDSGEKGLLLSFDDEAGKPWRFRYSYW 94
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLR----GKDGELRLGIRR 272
+ ++LT GWS +V +K L +GD V F R G L +G RR
Sbjct: 95 TSSQSYVLTKGWSRYVKEKQLDAGDVVHFERVRGLGTGDRLFIGCRR 141
>gi|209419738|gb|ACI46673.1| auxin response factor 8 [Solanum lycopersicum]
Length = 96
Score = 64.3 bits (155), Expect = 3e-07, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 40/57 (70%), Gaps = 1/57 (1%)
Query: 712 HLFNMEGLLRDPAK-GWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
+F +EG L DP + GW++++ D END++++GDDPW F N V I I + E+V+K+
Sbjct: 2 QMFGIEGFLEDPQRSGWQLVFVDRENDILLLGDDPWEAFVNNVWYIKILSPEDVQKL 58
>gi|302398539|gb|ADL36564.1| ABI3L domain class transcription factor [Malus x domestica]
Length = 439
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 54/103 (52%), Gaps = 3/103 (2%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
HMF K +T SD +P++ AE FP LD L +D G WRFR+ Y
Sbjct: 119 HMFEKVVTPSDVGKLNRLVIPKQHAERFFP-LDSSSNDNGLFLNFQDRTGKPWRFRYSYW 177
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLR--GKDGELRLGI 270
+ +++T GWS FV +K L +GD V F R G+ G+ RL I
Sbjct: 178 NSSQSYVITKGWSRFVKEKKLDAGDIVSFERGVGESGKDRLFI 220
>gi|116311012|emb|CAH67945.1| H0303A11-B0406H05.5 [Oryza sativa Indica Group]
Length = 287
Score = 64.3 bits (155), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
HMF K +T SD +P++ AE FP LD L +D G WRFR+ Y
Sbjct: 85 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSAANEKGLLLSFEDRTGKLWRFRYSYW 143
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRG 261
+ +++T GWS FV +K L +GD V F RG
Sbjct: 144 NSSQSYVMTKGWSRFVKEKRLDAGDTVSFCRG 175
>gi|75139062|sp|Q7EZD5.1|Y8577_ORYSJ RecName: Full=Putative B3 domain-containing protein Os08g0157700
gi|37806146|dbj|BAC99651.1| AP2 domain protein RAP2.8 (RAV2)-like [Oryza sativa Japonica Group]
gi|125602248|gb|EAZ41573.1| hypothetical protein OsJ_26107 [Oryza sativa Japonica Group]
Length = 287
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
HMF K +T SD VP++ AE FP Q L +D G WRFR+ Y
Sbjct: 69 HMFDKVVTPSDVGKLNRLVVPKQHAERFFPAAAAGTQ-----LCFEDRAGTPWRFRYSYW 123
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIR 271
G + +++T GWS FV L +GD V F R DG + R
Sbjct: 124 GSSQSYVMTKGWSRFVRAARLSAGDTVSFSRAADGRYFIDYR 165
>gi|125560208|gb|EAZ05656.1| hypothetical protein OsI_27883 [Oryza sativa Indica Group]
Length = 286
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
HMF K +T SD VP++ AE FP Q L +D G WRFR+ Y
Sbjct: 69 HMFDKVVTPSDVGKLNRLVVPKQHAERFFPAAAAGTQ-----LCFEDRAGTPWRFRYSYW 123
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIR 271
G + +++T GWS FV L +GD V F R DG + R
Sbjct: 124 GSSQSYVMTKGWSRFVRAARLSAGDTVSFSRAADGRYFIDYR 165
>gi|115439333|ref|NP_001043946.1| Os01g0693400 [Oryza sativa Japonica Group]
gi|75247719|sp|Q8RZX9.1|Y1934_ORYSJ RecName: Full=AP2/ERF and B3 domain-containing protein Os01g0693400
gi|18565433|dbj|BAB84620.1| DNA-binding protein RAV1-like [Oryza sativa Japonica Group]
gi|113533477|dbj|BAF05860.1| Os01g0693400 [Oryza sativa Japonica Group]
gi|215768937|dbj|BAH01166.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 393
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 57/116 (49%), Gaps = 17/116 (14%)
Query: 163 SPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAK------- 215
+P + H+F KT+T SD +P++ AE FP Q PS +K
Sbjct: 207 APAAARDHLFDKTVTPSDVGKLNRLVIPKQHAEKHFP-----LQLPSAGGESKGVLLNFE 261
Query: 216 DLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLR-----GKDGEL 266
D G WRFR+ Y + ++LT GWS FV +K L +GD V F R G DG+L
Sbjct: 262 DAAGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDVVGFYRSAASAGDDGKL 317
>gi|255555825|ref|XP_002518948.1| transcription factor, putative [Ricinus communis]
gi|223541935|gb|EEF43481.1| transcription factor, putative [Ricinus communis]
Length = 406
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 47/92 (51%), Gaps = 1/92 (1%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
HMF K +T SD +P++ AE FP LD L +D G WRFR+ Y
Sbjct: 101 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSTNDKGLLLNFEDKTGKAWRFRYSYW 159
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRG 261
+ +++T GWS FV K L +GD V F RG
Sbjct: 160 NSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRG 191
>gi|125527343|gb|EAY75457.1| hypothetical protein OsI_03358 [Oryza sativa Indica Group]
Length = 361
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 57/116 (49%), Gaps = 17/116 (14%)
Query: 163 SPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQE-------LVAK 215
+P + H+F KT+T SD +P++ AE FP Q PS L +
Sbjct: 175 APAAARDHLFDKTVTPSDVGKLNRLVIPKQHAEKHFP-----LQLPSAGGESKGVLLNFE 229
Query: 216 DLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLR-----GKDGEL 266
D G WRFR+ Y + ++LT GWS FV +K L +GD V F R G DG+L
Sbjct: 230 DAAGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDVVGFYRSAASAGDDGKL 285
>gi|302806463|ref|XP_002984981.1| hypothetical protein SELMODRAFT_424113 [Selaginella moellendorffii]
gi|300147191|gb|EFJ13856.1| hypothetical protein SELMODRAFT_424113 [Selaginella moellendorffii]
Length = 317
Score = 63.9 bits (154), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 62/123 (50%), Gaps = 24/123 (19%)
Query: 61 LWHACAGPLTSLPKKGNVVVYFPQGHLEQVASSSAFPPIEVPNFDLQPQIFCKVVDVQLL 120
LW C GPL +LP G+ VVYFPQGH EQV +S+ + +FD + L
Sbjct: 17 LWLECPGPLITLPAIGSQVVYFPQGHTEQVVASTQ----KEADFD--------IPISHLH 64
Query: 121 ANKENDEVYTQVALLPQPELEGLNLEAKQLEDLGVDEEGGGRSPTKSTPHMFCKTLTASD 180
A++ENDEV+ Q+ L P + L L D G+ TK T F +TLT+S
Sbjct: 65 ADQENDEVFAQMTLQPFSQTADPFL----LPDFGIQ--------TKQTIVSFSRTLTSSG 112
Query: 181 TST 183
S+
Sbjct: 113 ESS 115
>gi|226500200|ref|NP_001151105.1| DNA-binding protein RAV1 [Zea mays]
gi|195644338|gb|ACG41637.1| DNA-binding protein RAV1 [Zea mays]
Length = 395
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 70/141 (49%), Gaps = 18/141 (12%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQE-------LVAKDLHGVEW 222
H+F KT+T SD +P++ AE FP Q PS L +D G W
Sbjct: 214 HLFDKTVTPSDVGKLNRLVIPKQHAEKHFP-----LQLPSAGGESKGVLLNLEDAAGKVW 268
Query: 223 RFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDG-ELRLGIRRSVQPRNGLP 281
RFR+ Y + ++LT GWS FV +K L +GD V F R G + +L I ++ P
Sbjct: 269 RFRYSYWNSSQSYVLTKGWSRFVKEKGLQAGDVVGFYRSAAGADTKLFIDCKLR-----P 323
Query: 282 DSILSKQNSYPNVLSVVANAV 302
+S+++ + P+ + VA AV
Sbjct: 324 NSVVAASTAGPSPRAPVAKAV 344
>gi|359482026|ref|XP_002275955.2| PREDICTED: B3 domain-containing protein At2g36080-like [Vitis
vinifera]
Length = 346
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 70/162 (43%), Gaps = 15/162 (9%)
Query: 171 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRG 230
MF K LT SD +P++ AE FP L L +D G WRFR+ Y
Sbjct: 108 MFEKPLTPSDVGKLNRLVIPKQHAEKYFP-LGGDSGEKGLLLSFEDECGKCWRFRYSYWN 166
Query: 231 QPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELR--LGIRRSVQPRNGLPDSILSKQ 288
+ ++LT GWS FV +K L +GD VLF R + R +G RR P P +
Sbjct: 167 SSQSYVLTKGWSRFVKEKRLDAGDVVLFQRDRSDADRFFIGWRRRAGPAQDNPAAA---- 222
Query: 289 NSYPNVLSVVANAVSTKSMFHVFYS----PRATHADFVIPYQ 326
P V ++ VFYS P HA +PYQ
Sbjct: 223 ---PPVAVHTNTGNTSVGWTRVFYSAHAYPSHPHAP-PLPYQ 260
>gi|312282591|dbj|BAJ34161.1| unnamed protein product [Thellungiella halophila]
Length = 340
Score = 63.5 bits (153), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 54/106 (50%), Gaps = 2/106 (1%)
Query: 166 KSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFR 225
+S +F K +T SD +P+ AE FP L +D+ G WRFR
Sbjct: 178 RSAEPLFEKAVTPSDVGKLNRLVIPKHHAEKHFPLPSSNVSVKGVLLNFEDVTGKVWRFR 237
Query: 226 HIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLR--GKDGELRLG 269
+ Y + ++LT GWS FV +KNL +GD V F R G+D +L +G
Sbjct: 238 YSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVSFSRSDGQDQQLYIG 283
>gi|242058413|ref|XP_002458352.1| hypothetical protein SORBIDRAFT_03g031860 [Sorghum bicolor]
gi|241930327|gb|EES03472.1| hypothetical protein SORBIDRAFT_03g031860 [Sorghum bicolor]
Length = 413
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 52/105 (49%), Gaps = 12/105 (11%)
Query: 163 SPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQE-------LVAK 215
SP + H+F KT+T SD +P++ AE FP Q PS L +
Sbjct: 213 SPATAREHLFDKTVTPSDVGKLNRLVIPKQHAEKHFP-----LQLPSAGGESKGVLLNLE 267
Query: 216 DLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLR 260
D G WRFR+ Y + ++LT GWS FV +K L +GD V F R
Sbjct: 268 DAAGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKGLQAGDVVGFYR 312
>gi|125571663|gb|EAZ13178.1| hypothetical protein OsJ_03098 [Oryza sativa Japonica Group]
Length = 231
Score = 63.2 bits (152), Expect = 6e-07, Method: Composition-based stats.
Identities = 42/116 (36%), Positives = 57/116 (49%), Gaps = 17/116 (14%)
Query: 163 SPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQE-------LVAK 215
+P + H+F KT+T SD +P++ AE FP Q PS L +
Sbjct: 45 APAAARDHLFDKTVTPSDVGKLNRLVIPKQHAEKHFP-----LQLPSAGGESKGVLLNFE 99
Query: 216 DLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLR-----GKDGEL 266
D G WRFR+ Y + ++LT GWS FV +K L +GD V F R G DG+L
Sbjct: 100 DAAGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDVVGFYRSAASAGDDGKL 155
>gi|297740162|emb|CBI30344.3| unnamed protein product [Vitis vinifera]
Length = 239
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 70/162 (43%), Gaps = 15/162 (9%)
Query: 171 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRG 230
MF K LT SD +P++ AE FP L L +D G WRFR+ Y
Sbjct: 1 MFEKPLTPSDVGKLNRLVIPKQHAEKYFP-LGGDSGEKGLLLSFEDECGKCWRFRYSYWN 59
Query: 231 QPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELR--LGIRRSVQPRNGLPDSILSKQ 288
+ ++LT GWS FV +K L +GD VLF R + R +G RR P P +
Sbjct: 60 SSQSYVLTKGWSRFVKEKRLDAGDVVLFQRDRSDADRFFIGWRRRAGPAQDNPAAA---- 115
Query: 289 NSYPNVLSVVANAVSTKSMFHVFYS----PRATHADFVIPYQ 326
P V ++ VFYS P HA +PYQ
Sbjct: 116 ---PPVAVHTNTGNTSVGWTRVFYSAHAYPSHPHAP-PLPYQ 153
>gi|224111734|ref|XP_002315958.1| AP2 domain-containing transcription factor [Populus trichocarpa]
gi|222864998|gb|EEF02129.1| AP2 domain-containing transcription factor [Populus trichocarpa]
Length = 367
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Query: 157 EEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELV-AK 215
+ G GR K+ +F K +T SD +P++ AE FP L+ +
Sbjct: 192 DHGCGR-VLKAREQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSTSSNSTKGVLLNLE 250
Query: 216 DLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLR--GKDGELRL 268
D+ G WRFR+ Y + ++LT GWS FV +KNL +GD V F R G D +L +
Sbjct: 251 DVSGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVCFQRSTGPDNQLYI 305
>gi|242088721|ref|XP_002440193.1| hypothetical protein SORBIDRAFT_09g027530 [Sorghum bicolor]
gi|241945478|gb|EES18623.1| hypothetical protein SORBIDRAFT_09g027530 [Sorghum bicolor]
Length = 406
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 61/124 (49%), Gaps = 9/124 (7%)
Query: 163 SPTKSTP--HMFCKTLTASDTSTHGGFSVPRRAAEDCFP---PLDYKQQRPSQ----ELV 213
SPT T H+F KT+T SD +P++ AE FP P + L
Sbjct: 204 SPTAVTAREHLFDKTVTPSDVGKLNRLVIPKQHAEKHFPLQLPAAAAAVVGGECKGVLLN 263
Query: 214 AKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRS 273
+D G WRFR+ Y + ++LT GWS FV +K L +GDAV F R G+ + I
Sbjct: 264 FEDATGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDAVGFYRSAGGKQQFFIDCK 323
Query: 274 VQPR 277
++P+
Sbjct: 324 LRPK 327
>gi|297814780|ref|XP_002875273.1| hypothetical protein ARALYDRAFT_484335 [Arabidopsis lyrata subsp.
lyrata]
gi|297321111|gb|EFH51532.1| hypothetical protein ARALYDRAFT_484335 [Arabidopsis lyrata subsp.
lyrata]
Length = 333
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 59/108 (54%), Gaps = 4/108 (3%)
Query: 166 KSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFP-PLDYKQQRPSQELVA-KDLHGVEWR 223
K++ +F KT+T SD +P+ AE FP PL L+ +D++G WR
Sbjct: 174 KTSELLFEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGILLNFEDVNGKVWR 233
Query: 224 FRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLR--GKDGELRLG 269
FR+ Y + ++LT GWS FV +K L +GD + F R G+D +L +G
Sbjct: 234 FRYSYWNSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNGQDQKLFIG 281
>gi|383932346|gb|AFH57270.1| RAV [Gossypium hirsutum]
Length = 357
Score = 63.2 bits (152), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 55/115 (47%), Gaps = 2/115 (1%)
Query: 166 KSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFR 225
K+ +F K +T SD +P++ AE FP L +D+ G WRFR
Sbjct: 187 KAREQLFEKAVTPSDVGKLNRLVIPKQHAEKYFPLQSGSASSKGVLLNFEDVTGKVWRFR 246
Query: 226 HIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGL 280
+ Y + ++L GWS FV +KNL +GD V F R E +L I + R GL
Sbjct: 247 YSYWNSSQSYVLIKGWSRFVKEKNLKAGDIVSFQRSTGTEKQLYI--DWKARTGL 299
>gi|356571279|ref|XP_003553806.1| PREDICTED: B3 domain-containing transcription factor NGA1-like
[Glycine max]
Length = 413
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 48/91 (52%), Gaps = 1/91 (1%)
Query: 171 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRG 230
MF K +T SD +P++ AE FP LD L +D +G WRFR+ Y
Sbjct: 89 MFEKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSSNEKGLLLNFEDRNGKVWRFRYSYWN 147
Query: 231 QPRRHLLTTGWSIFVSQKNLVSGDAVLFLRG 261
+ +++T GWS FV +K L +GD V F RG
Sbjct: 148 SSQSYVMTKGWSRFVKEKKLDAGDIVSFQRG 178
>gi|356537126|ref|XP_003537081.1| PREDICTED: B3 domain-containing protein At5g06250-like [Glycine
max]
Length = 337
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 72/163 (44%), Gaps = 6/163 (3%)
Query: 171 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVA--KDLHGVEWRFRHIY 228
MF K LT SD +P++ AE FP + L+ +D G WRFR+ Y
Sbjct: 72 MFEKPLTPSDVGKLNRLVIPKQHAEKYFPLSGDSGGSECKGLLLSFEDESGKCWRFRYSY 131
Query: 229 RGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRL--GIRRSVQPRNGLPDSILS 286
+ ++LT GWS +V K L +GD VLF R + RL G RR Q LP + +S
Sbjct: 132 WNSSQSYVLTKGWSRYVKDKRLDAGDVVLFERHRVDAQRLFIGWRRRRQSDAALPPAHVS 191
Query: 287 KQNSYPNVLSVVANAVSTKSMF--HVFYSPRATHADFVIPYQK 327
+ S + N T+ + H Y H PYQ+
Sbjct: 192 SRKSGGGDGNSNKNEGWTRGFYSAHHPYPTHHLHHHQPSPYQQ 234
>gi|304307949|gb|ADL70287.1| auxin response factor 3 [Arabidopsis thaliana]
gi|304307957|gb|ADL70291.1| auxin response factor 3 [Arabidopsis thaliana]
gi|304307973|gb|ADL70299.1| auxin response factor 3 [Arabidopsis thaliana]
Length = 238
Score = 62.8 bits (151), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 68/151 (45%), Gaps = 31/151 (20%)
Query: 384 DECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGGVLDF 443
D+ + + HQ++VSPWEI+ S S+ + K+ R G + PD PVS G DF
Sbjct: 1 DDIVANGHQQRVSPWEIEPSGSISNSGSFVTTGPKRSRIGFSSGKPDIPVS-EGIRATDF 59
Query: 444 EESVRSSKVLQGQENV-GFVSPLYGCDTVNHPLGFEMRAPAHQSLALNGIRKDNINELVR 502
EES+R +VLQGQE GF++ S G R+
Sbjct: 60 EESLRFQRVLQGQEIFPGFINTC--------------------SDGGAGARRGRFKG--- 96
Query: 503 ALPTSYTGFVESNRFPKVLQGQEICPLRSLT 533
T F +S F KVLQGQE P S+T
Sbjct: 97 ------TEFGDSYGFHKVLQGQETVPAYSIT 121
>gi|21593532|gb|AAM65499.1| AP2 domain transcription factor [Arabidopsis thaliana]
Length = 333
Score = 62.8 bits (151), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 166 KSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFP-PLDYKQQRPSQELVA-KDLHGVEWR 223
K+ +F KT+T SD +P+ AE FP PL L+ +D++G WR
Sbjct: 177 KTAELLFEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVWR 236
Query: 224 FRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGI 270
FR+ Y + ++LT GWS FV +K L +GD + F R D + + I
Sbjct: 237 FRYSYWNSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNDQDQKFFI 283
>gi|226497110|ref|NP_001141742.1| uncharacterized protein LOC100273875 [Zea mays]
gi|194705766|gb|ACF86967.1| unknown [Zea mays]
gi|413946369|gb|AFW79018.1| putative AP2/EREBP transcription factor superfamily protein [Zea
mays]
Length = 406
Score = 62.4 bits (150), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 57/116 (49%), Gaps = 9/116 (7%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFP---PLDYKQQRPSQE------LVAKDLHGV 220
H+F KT+T SD +P++ AE FP P S L +D G
Sbjct: 204 HLFDKTVTPSDVGKLNRLVIPKQHAEKHFPLQLPAAAAAGVGSGGECKGVLLNFEDAAGK 263
Query: 221 EWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQP 276
WRFR+ Y + ++LT GWS FV +K L +GDAV F R G+ +L I ++P
Sbjct: 264 AWRFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDAVGFYRSAGGKQQLFIDCKLRP 319
>gi|356495986|ref|XP_003516851.1| PREDICTED: AP2/ERF and B3 domain-containing transcription repressor
TEM1-like [Glycine max]
Length = 384
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 54/112 (48%), Gaps = 9/112 (8%)
Query: 166 KSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAK-------DLH 218
K+ +F K +T SD +P++ AE FP + AK D+
Sbjct: 199 KAREQLFQKAVTPSDVGKLNRLVIPKQHAEKHFPLQSAANGVSATATAAKGVLLNFEDVG 258
Query: 219 GVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLR--GKDGELRL 268
G WRFR+ Y + ++LT GWS FV +KNL +GD V F R G D +L +
Sbjct: 259 GKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDTVCFQRSTGPDRQLYI 310
>gi|255579355|ref|XP_002530522.1| transcription factor, putative [Ricinus communis]
gi|223529926|gb|EEF31854.1| transcription factor, putative [Ricinus communis]
Length = 373
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 54/104 (51%), Gaps = 3/104 (2%)
Query: 171 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRG 230
MF K LT SD +P++ AE FP L L +D G WRFR+ Y
Sbjct: 136 MFEKPLTPSDVGKLNRLVIPKQHAEKYFP-LGGDSVDKGLLLSFEDELGKCWRFRYSYWN 194
Query: 231 QPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGK-DGE-LRLGIRR 272
+ ++LT GWS +V K L +GD VLF R + DGE L +G RR
Sbjct: 195 SSQSYVLTKGWSRYVKDKQLDAGDVVLFERHRLDGERLFIGWRR 238
>gi|15230871|ref|NP_189201.1| AP2/ERF and B3 domain-containing transcription factor ARF14
[Arabidopsis thaliana]
gi|75273878|sp|Q9LS06.1|RAVL4_ARATH RecName: Full=AP2/ERF and B3 domain-containing transcription factor
ARF14; AltName: Full=Protein AUXIN RESPONSE FACTOR 14;
AltName: Full=RAV1-like ethylene-responsive
transcription factor ARF14
gi|7939559|dbj|BAA95760.1| RAV1 DNA-binding protein-like [Arabidopsis thaliana]
gi|20152524|emb|CAD29641.1| putative auxin response factor 14 [Arabidopsis thaliana]
gi|110738703|dbj|BAF01276.1| AP2 domain transcription factor [Arabidopsis thaliana]
gi|332643541|gb|AEE77062.1| AP2/ERF and B3 domain-containing transcription factor ARF14
[Arabidopsis thaliana]
Length = 333
Score = 62.4 bits (150), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
Query: 166 KSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFP-PLDYKQQRPSQELVA-KDLHGVEWR 223
K+ +F KT+T SD +P+ AE FP PL L+ +D++G WR
Sbjct: 177 KTAELLFEKTVTPSDVGKLNRLVIPKHQAEKHFPLPLGNNNVSVKGMLLNFEDVNGKVWR 236
Query: 224 FRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGI 270
FR+ Y + ++LT GWS FV +K L +GD + F R D + + I
Sbjct: 237 FRYSYWNSSQSYVLTKGWSRFVKEKRLCAGDLISFKRSNDQDQKFFI 283
>gi|326507492|dbj|BAK03139.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 414
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 53/112 (47%), Gaps = 16/112 (14%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQE-----------LVAKDLH 218
H+F KT+T SD +P++ AE FP Q PS L D
Sbjct: 194 HLFDKTVTPSDVGKLNRLVIPKQHAEKHFP-----LQLPSASAAVPGECKGVLLNFDDAT 248
Query: 219 GVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGI 270
G WRFR+ Y + ++LT GWS FV +K L +GDAV F R G +L I
Sbjct: 249 GKVWRFRYSYWNSSQSYVLTKGWSRFVKEKGLHAGDAVEFYRAASGNNQLFI 300
>gi|356503831|ref|XP_003520706.1| PREDICTED: B3 domain-containing protein At2g36080-like [Glycine
max]
Length = 276
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/120 (35%), Positives = 60/120 (50%), Gaps = 2/120 (1%)
Query: 171 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRG 230
MF K LT SD +P++ AE FP LD + L +D G WRFR+ Y
Sbjct: 55 MFEKPLTPSDVGKLNRLVIPKQHAEKHFP-LDSSAAK-GLLLSFEDESGKCWRFRYSYWN 112
Query: 231 QPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPDSILSKQNS 290
+ ++LT GWS +V K L +GD VLF R + R I S + N +P + + ++S
Sbjct: 113 SSQSYVLTKGWSRYVKDKRLHAGDVVLFHRHRSLPQRFFISCSRRQPNPVPAHVSTTRSS 172
>gi|224134096|ref|XP_002321735.1| predicted protein [Populus trichocarpa]
gi|224134104|ref|XP_002321737.1| predicted protein [Populus trichocarpa]
gi|222868731|gb|EEF05862.1| predicted protein [Populus trichocarpa]
gi|222868733|gb|EEF05864.1| predicted protein [Populus trichocarpa]
Length = 93
Score = 62.0 bits (149), Expect = 1e-06, Method: Composition-based stats.
Identities = 27/63 (42%), Positives = 41/63 (65%)
Query: 684 VHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDPAKGWRILYTDSENDVMVVGD 743
VHKQG+ VGR++D + NGYN+L ++L+ + G L P K I+ + E D+++VGD
Sbjct: 30 VHKQGTAVGRSLDPTKFNGYNELTTKLDQILEFNGKLAAPNKDRLIVSINDEGDMILVGD 89
Query: 744 DPW 746
PW
Sbjct: 90 YPW 92
>gi|449466693|ref|XP_004151060.1| PREDICTED: AP2/ERF and B3 domain-containing transcription factor
RAV1-like [Cucumis sativus]
Length = 317
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
Query: 171 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRG 230
+F KT+T SD +P++ AE FP + L +D+ G WRFR+ Y
Sbjct: 167 LFEKTVTPSDVGKLNRLVIPKQHAEKNFPMEEGVVSGKGMLLNFEDMGGKVWRFRYSYWN 226
Query: 231 QPRRHLLTTGWSIFVSQKNLVSGDAVLFLR--GKDGELRL 268
+ ++LT GWS FV L +GD V FLR G D +L +
Sbjct: 227 SSQSYVLTKGWSRFVKDNTLRAGDVVRFLRSTGPDKQLYI 266
>gi|414880879|tpg|DAA58010.1| TPA: putative AP2/EREBP transcription factor superfamily protein
[Zea mays]
Length = 389
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 69/141 (48%), Gaps = 18/141 (12%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQE-------LVAKDLHGVEW 222
H+F KT+T SD +P++ AE FP Q PS L +D G W
Sbjct: 211 HLFDKTVTPSDVGKLNRLVIPKQHAEKHFP-----LQLPSAGGESKGVLLNLEDAAGKVW 265
Query: 223 RFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDG-ELRLGIRRSVQPRNGLP 281
RFR+ Y + ++LT GWS FV +K L +GD V F R G + +L I ++ P
Sbjct: 266 RFRYSYWNSSQSYVLTKGWSRFVKEKGLQAGDVVGFYRSAAGADTKLFIDCKLR-----P 320
Query: 282 DSILSKQNSYPNVLSVVANAV 302
+S++ + P+ + VA AV
Sbjct: 321 NSVVVASTAGPSPPAPVAKAV 341
>gi|302398541|gb|ADL36565.1| ABI3L domain class transcription factor [Malus x domestica]
Length = 382
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 55/113 (48%), Gaps = 9/113 (7%)
Query: 171 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRG 230
MF K LT SD +P++ AE FP L +D G WRFR+ Y
Sbjct: 121 MFEKPLTPSDVGKLNRLVIPKQHAEKYFP---LGSGDSGLLLSFEDESGKSWRFRYSYWN 177
Query: 231 QPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRL--GIRRSVQPRNGLP 281
+ ++LT GWS +V +K L +GD VLF R + RL G RR RN +P
Sbjct: 178 SSQSYVLTKGWSRYVKEKRLNAGDVVLFERRRANTDRLSIGWRR----RNAVP 226
>gi|30686669|ref|NP_850260.1| B3 domain-containing protein [Arabidopsis thaliana]
gi|75151444|sp|Q8GYJ2.1|Y2608_ARATH RecName: Full=B3 domain-containing protein At2g36080; AltName:
Full=Protein AUXIN RESPONSIVE FACTOR 31
gi|26450255|dbj|BAC42244.1| putative RAV2-like DNA binding protein [Arabidopsis thaliana]
gi|330254110|gb|AEC09204.1| B3 domain-containing protein [Arabidopsis thaliana]
Length = 244
Score = 61.6 bits (148), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Query: 171 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVA--KDLHGVEWRFRHIY 228
+F K LT SD +P++ AE FP + L+ +D G WRFR+ Y
Sbjct: 37 LFEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVEKGLLLCFEDEEGKPWRFRYSY 96
Query: 229 RGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKD--GELRLGIRR 272
+ ++LT GWS +V +K+L +GD VLF R + G +G RR
Sbjct: 97 WNSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRSDGGRFFIGWRR 142
>gi|449434658|ref|XP_004135113.1| PREDICTED: AP2/ERF and B3 domain-containing transcription repressor
RAV2-like [Cucumis sativus]
gi|449529138|ref|XP_004171558.1| PREDICTED: AP2/ERF and B3 domain-containing transcription repressor
RAV2-like [Cucumis sativus]
Length = 344
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 59/114 (51%), Gaps = 5/114 (4%)
Query: 159 GGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVA--KD 216
G P + +F K +T SD +P++ AE FP L S+ L+ +D
Sbjct: 170 GSDDDPETARELLFEKAVTPSDVGKLNRLVIPKQHAEKNFP-LQTGSTASSKGLLLNFED 228
Query: 217 LHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLR--GKDGELRL 268
G WRFR+ Y + ++LT GWS FV +KNL +GD V FL+ G+D +L +
Sbjct: 229 GGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDIVSFLKSTGQDKQLYI 282
>gi|4678220|gb|AAD26965.1| putative DNA-binding protein RAV2 [Arabidopsis thaliana]
gi|20152528|emb|CAD29643.1| putative auxin response factor 31 [Arabidopsis thaliana]
gi|20197990|gb|AAM15343.1| putative DNA-binding protein RAV2 [Arabidopsis thaliana]
Length = 158
Score = 61.2 bits (147), Expect = 2e-06, Method: Composition-based stats.
Identities = 37/106 (34%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Query: 171 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVA--KDLHGVEWRFRHIY 228
+F K LT SD +P++ AE FP + L+ +D G WRFR+ Y
Sbjct: 22 LFEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVEKGLLLCFEDEEGKPWRFRYSY 81
Query: 229 RGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKD--GELRLGIRR 272
+ ++LT GWS +V +K+L +GD VLF R + G +G RR
Sbjct: 82 WNSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRSDGGRFFIGWRR 127
>gi|449526628|ref|XP_004170315.1| PREDICTED: AP2/ERF and B3 domain-containing transcription factor
RAV1-like, partial [Cucumis sativus]
Length = 311
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
Query: 171 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYRG 230
+F KT+T SD +P++ AE FP + L +D+ G WRFR+ Y
Sbjct: 161 LFEKTVTPSDVGKLNRLVIPKQHAEKNFPMEEGVVSGKGMLLNFEDMGGKVWRFRYSYWN 220
Query: 231 QPRRHLLTTGWSIFVSQKNLVSGDAVLFLR--GKDGELRL 268
+ ++LT GWS FV L +GD V FLR G D +L +
Sbjct: 221 SSQSYVLTKGWSRFVKDNTLRAGDVVRFLRSTGPDKQLYI 260
>gi|356576289|ref|XP_003556265.1| PREDICTED: AP2/ERF and B3 domain-containing transcription repressor
TEM1-like [Glycine max]
Length = 362
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 10/110 (9%)
Query: 161 GRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPP----------LDYKQQRPSQ 210
G K+ +F KT+T SD +P++ AE FP +
Sbjct: 167 GAFDAKAREQLFEKTVTQSDVGKLNRLVIPKQHAEKHFPLSGSGGGALPCMAAAAGAKGM 226
Query: 211 ELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLR 260
L +D+ G WRFR+ Y + ++LT GWS FV +KNL +GDAV F +
Sbjct: 227 LLNFEDVGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDAVQFFK 276
>gi|224084810|ref|XP_002307409.1| predicted protein [Populus trichocarpa]
gi|222856858|gb|EEE94405.1| predicted protein [Populus trichocarpa]
Length = 336
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 308 FHVFYSPRAT-HADFVIPYQKYVKIIMNPICIGTRFKMRFEMDDSPERRC-NGVVTGITD 365
F V Y PRA ++DFV+ + + G R KM E +DS G V+G
Sbjct: 25 FDVVYYPRAGWYSDFVVRAEAVEAALGVFWTAGMRVKMAMETEDSSRMTWFQGTVSGTGL 84
Query: 366 LDPYRWPNSKWRCLMVRWDECIGSDHQEQVSPWEIDRSVSLPPLSIQSSPRMKKLR 421
D W S WR L + WDE + ++VSPW+++ + P L + P MKKLR
Sbjct: 85 PDSGAWRGSPWRMLQITWDEPEVLQNAKRVSPWQVEFVATTPQLQA-AFPPMKKLR 139
>gi|326526987|dbj|BAK00882.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 380
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
Query: 163 SPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVA--KDLHGV 220
SP H+F KT+T SD +P++ AE FP S+ L+ +D G
Sbjct: 194 SPAAVREHLFDKTVTPSDVGKLNRLVIPKQNAEKHFPLQLPAGGGESKGLLLNFEDDAGK 253
Query: 221 EWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDG 264
WRFR+ Y + ++LT GWS FV +K L +GD V F R G
Sbjct: 254 VWRFRYSYWNSSQSYVLTKGWSRFVKEKGLGAGDVVGFYRSAAG 297
>gi|357488335|ref|XP_003614455.1| AP2 domain-containing transcription factor [Medicago truncatula]
gi|355515790|gb|AES97413.1| AP2 domain-containing transcription factor [Medicago truncatula]
Length = 412
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 55/112 (49%), Gaps = 7/112 (6%)
Query: 166 KSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFP--PLDYKQQRPSQE-----LVAKDLH 218
K+ +F K +T SD +P++ AE FP D Q S L +D+
Sbjct: 189 KAREALFEKVVTPSDVGKLNRLVIPKQHAEKHFPLQKADCVQGSASAAGKGVLLNFEDIG 248
Query: 219 GVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGI 270
G WRFR+ Y + ++LT GWS FV +KNL +GD V F R E +L I
Sbjct: 249 GKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLKAGDTVCFQRSTGPEKQLFI 300
>gi|297827087|ref|XP_002881426.1| hypothetical protein ARALYDRAFT_902720 [Arabidopsis lyrata subsp.
lyrata]
gi|297327265|gb|EFH57685.1| hypothetical protein ARALYDRAFT_902720 [Arabidopsis lyrata subsp.
lyrata]
Length = 236
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Query: 171 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVA--KDLHGVEWRFRHIY 228
+F K LT SD +P++ AE FP + L+ +D G WRFR+ Y
Sbjct: 37 LFEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVEKGLLLCFEDEEGKPWRFRYSY 96
Query: 229 RGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGK--DGELRLGIRR 272
+ ++LT GWS +V +K+L +GD VLF R + G +G RR
Sbjct: 97 WNSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRANGGRFFIGWRR 142
>gi|351725319|ref|NP_001237600.1| RAV-like DNA-binding protein [Glycine max]
gi|72140114|gb|AAZ66389.1| RAV-like DNA-binding protein [Glycine max]
Length = 351
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 59/128 (46%), Gaps = 12/128 (9%)
Query: 153 LGVDEEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPP----------LD 202
L D G K+ +F KT+T SD +P++ AE FP +
Sbjct: 153 LDADTASSGVFDAKAREQLFEKTVTPSDVGKLNRLVIPKQHAEKHFPLSGSGDESSPCVA 212
Query: 203 YKQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLR-- 260
L +D+ G WRFR+ Y + ++LT GWS FV +KNL +GDAV F +
Sbjct: 213 GASAAKGMLLNFEDVGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDAVQFFKST 272
Query: 261 GKDGELRL 268
G D +L +
Sbjct: 273 GPDRQLYI 280
>gi|297817532|ref|XP_002876649.1| hypothetical protein ARALYDRAFT_486704 [Arabidopsis lyrata subsp.
lyrata]
gi|297322487|gb|EFH52908.1| hypothetical protein ARALYDRAFT_486704 [Arabidopsis lyrata subsp.
lyrata]
Length = 304
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 60/123 (48%), Gaps = 6/123 (4%)
Query: 163 SPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQE---LVAKDLHG 219
S + HMF K +T SD +P++ AE FP LD + + L +D G
Sbjct: 14 SSSMEREHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDNSTTNDNNKGLLLNFEDRSG 72
Query: 220 VEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNG 279
WRFR+ Y + +++T GWS FV K L +GD V F R + +L I +P+
Sbjct: 73 NSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRDSGNKDKLYIDWRRRPK-- 130
Query: 280 LPD 282
+PD
Sbjct: 131 IPD 133
>gi|326518670|dbj|BAJ92496.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 308
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 52/108 (48%), Gaps = 6/108 (5%)
Query: 159 GGGR---SPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQE---L 212
G GR +P + +F K +T SD VP++ AE FPP + L
Sbjct: 142 GHGRAQPTPAWAREFLFEKAVTPSDVGKLNRLVVPKQHAEKHFPPTTAAAAGGDGKGLLL 201
Query: 213 VAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLR 260
+D G WRFR+ Y + ++LT GWS FV +K L +GD V F R
Sbjct: 202 NFEDGQGKVWRFRYSYWNSSQSYVLTKGWSRFVQEKGLCAGDTVTFSR 249
>gi|21554039|gb|AAM63120.1| putative RAV2-like DNA-binding protein [Arabidopsis thaliana]
Length = 352
Score = 60.8 bits (146), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 61/127 (48%), Gaps = 9/127 (7%)
Query: 153 LGVDEEG--GGRSPT------KSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFP-PLDY 203
L VD G G S T K+ +F K +T SD +P++ AE FP P
Sbjct: 161 LSVDANGKRNGSSTTQNDKVLKTREVLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPS 220
Query: 204 KQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKD 263
+ +D++G WRFR+ Y + ++LT GWS FV +KNL +GD V F R
Sbjct: 221 PAVTKGVLINFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVTFERSTG 280
Query: 264 GELRLGI 270
E +L I
Sbjct: 281 LERQLYI 287
>gi|357443089|ref|XP_003591822.1| AP2/ERF and B3 domain-containing transcription repressor TEM1
[Medicago truncatula]
gi|355480870|gb|AES62073.1| AP2/ERF and B3 domain-containing transcription repressor TEM1
[Medicago truncatula]
Length = 384
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 56/113 (49%), Gaps = 14/113 (12%)
Query: 161 GRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVA------ 214
G K+ +F KT+T SD +P++ AE FP L+ + + V+
Sbjct: 181 GACDAKAREQLFEKTVTPSDVGKLNRLVIPKQHAEKHFP-LNAVAVAVACDGVSTAAAAA 239
Query: 215 -------KDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLR 260
+D+ G WRFR+ Y + ++LT GWS FV +KNL +GDAV F R
Sbjct: 240 KGLLLNFEDVGGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDAVRFFR 292
>gi|304307969|gb|ADL70297.1| auxin response factor 3 [Arabidopsis thaliana]
Length = 231
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 65/144 (45%), Gaps = 31/144 (21%)
Query: 391 HQEQVSPWEIDRSVSLPPLSIQSSPRMKKLRTGLQAPPPDYPVSARGGGVLDFEESVRSS 450
HQ++VSPWEI+ S S+ + K+ R G + PD PVS G DFEES+R
Sbjct: 1 HQQRVSPWEIEPSGSISNSGSFVTTGPKRSRIGFSSGKPDIPVS-EGICATDFEESLRFQ 59
Query: 451 KVLQGQENV-GFVSPLYGCDTVNHPLGFEMRAPAHQSLALNGIRKDNINELVRALPTSYT 509
+VLQGQE GF++ S G+R+ T
Sbjct: 60 RVLQGQEIFPGFINTC--------------------SDGGAGVRRGRFKG---------T 90
Query: 510 GFVESNRFPKVLQGQEICPLRSLT 533
F +S F KVLQGQE P S+T
Sbjct: 91 EFGDSYGFHKVLQGQETVPAYSIT 114
>gi|297838653|ref|XP_002887208.1| AP2 domain-containing protein RAP2.8 [Arabidopsis lyrata subsp.
lyrata]
gi|297333049|gb|EFH63467.1| AP2 domain-containing protein RAP2.8 [Arabidopsis lyrata subsp.
lyrata]
Length = 352
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 65/136 (47%), Gaps = 11/136 (8%)
Query: 153 LGVDEEG--GGRSPT------KSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFP-PLDY 203
L VD G G S T K+ +F K +T SD +P++ AE FP P
Sbjct: 161 LSVDANGKRNGSSTTQNDNVLKTREVLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPS 220
Query: 204 KQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLR--G 261
+ +D++G WRFR+ Y + ++LT GWS FV +KNL +GD V F R G
Sbjct: 221 PAVTKGVLINFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLQAGDVVTFERSTG 280
Query: 262 KDGELRLGIRRSVQPR 277
D +L + + PR
Sbjct: 281 LDRQLYIDWKARSGPR 296
>gi|15228681|ref|NP_191769.1| auxin-responsive protein IAA30 [Arabidopsis thaliana]
gi|46396010|sp|Q9M1R4.1|IAA30_ARATH RecName: Full=Auxin-responsive protein IAA30; AltName:
Full=Indoleacetic acid-induced protein 30
gi|6899920|emb|CAB71870.1| auxin-induced protein homolog [Arabidopsis thaliana]
gi|49616377|gb|AAT67085.1| IAA30 [Arabidopsis thaliana]
gi|225898739|dbj|BAH30500.1| hypothetical protein [Arabidopsis thaliana]
gi|284794605|gb|ADB93675.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|284794607|gb|ADB93676.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|284794609|gb|ADB93677.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|284794611|gb|ADB93678.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|284794613|gb|ADB93679.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322669|gb|ADL70787.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322671|gb|ADL70788.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322673|gb|ADL70789.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322675|gb|ADL70790.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322677|gb|ADL70791.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322679|gb|ADL70792.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322681|gb|ADL70793.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322683|gb|ADL70794.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322685|gb|ADL70795.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322687|gb|ADL70796.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322689|gb|ADL70797.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322691|gb|ADL70798.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|304322693|gb|ADL70799.1| indole-3-acetic acid inducible 30 [Arabidopsis thaliana]
gi|332646789|gb|AEE80310.1| auxin-responsive protein IAA30 [Arabidopsis thaliana]
Length = 172
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 682 TKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRD-----PAKGWRILYTDSEN 736
KV+ +G +GR IDL LNGY+DL++ L+++FN L + K + Y D E
Sbjct: 85 VKVNMEGVPIGRKIDLLSLNGYHDLITTLDYMFNASILWAEEEDMCSEKSHVLTYADKEG 144
Query: 737 DVMVVGDDPWHEFCNEVSKIHI 758
D M+VGD PW F + V ++ I
Sbjct: 145 DWMMVGDVPWEMFLSSVRRLKI 166
>gi|297821108|ref|XP_002878437.1| indoleacetic acid-induced protein 30 [Arabidopsis lyrata subsp.
lyrata]
gi|297324275|gb|EFH54696.1| indoleacetic acid-induced protein 30 [Arabidopsis lyrata subsp.
lyrata]
Length = 172
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 5/82 (6%)
Query: 682 TKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRD-----PAKGWRILYTDSEN 736
KV+ +G +GR IDL LNGY+DL++ L+++FN L + K + Y D E
Sbjct: 85 VKVNMEGVPIGRKIDLLSLNGYHDLITTLDYMFNASILWAEEEEMCSEKSHVLTYADKEG 144
Query: 737 DVMVVGDDPWHEFCNEVSKIHI 758
D M+VGD PW F + V ++ I
Sbjct: 145 DWMMVGDVPWEMFLSSVRRLKI 166
>gi|18409138|ref|NP_564947.1| AP2/ERF and B3 domain-containing transcription factor RAV2
[Arabidopsis thaliana]
gi|334183743|ref|NP_001185352.1| AP2/ERF and B3 domain-containing transcription factor RAV2
[Arabidopsis thaliana]
gi|75340021|sp|P82280.1|RAV2_ARATH RecName: Full=AP2/ERF and B3 domain-containing transcription
repressor RAV2; AltName: Full=Ethylene-responsive
transcription factor RAV2; AltName: Full=Protein RELATED
TO ABI3/VP1 2; AltName: Full=Protein RELATED TO APETALA2
8; AltName: Full=Protein TEMPRANILLO 2
gi|12323214|gb|AAG51586.1|AC011665_7 putative DNA-binding protein (RAV2-like) [Arabidopsis thaliana]
gi|12324134|gb|AAG52035.1|AC011914_5 RAV2; 17047-15989 [Arabidopsis thaliana]
gi|13430800|gb|AAK26022.1|AF360312_1 putative DNA-binding protein(RAV2 [Arabidopsis thaliana]
gi|3868859|dbj|BAA34251.1| RAV2 [Arabidopsis thaliana]
gi|15810645|gb|AAL07247.1| putative DNA-binding protein RAV2 [Arabidopsis thaliana]
gi|332196726|gb|AEE34847.1| AP2/ERF and B3 domain-containing transcription factor RAV2
[Arabidopsis thaliana]
gi|332196727|gb|AEE34848.1| AP2/ERF and B3 domain-containing transcription factor RAV2
[Arabidopsis thaliana]
Length = 352
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 61/127 (48%), Gaps = 9/127 (7%)
Query: 153 LGVDEEG--GGRSPT------KSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFP-PLDY 203
L VD G G S T K+ +F K +T SD +P++ AE FP P
Sbjct: 161 LSVDANGKRNGSSTTQNDKVLKTREVLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPS 220
Query: 204 KQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKD 263
+ +D++G WRFR+ Y + ++LT GWS FV +KNL +GD V F R
Sbjct: 221 PAVTKGVLINFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVTFERSTG 280
Query: 264 GELRLGI 270
E +L I
Sbjct: 281 LERQLYI 287
>gi|357127299|ref|XP_003565320.1| PREDICTED: putative AP2/ERF and B3 domain-containing protein
Os01g0140700-like [Brachypodium distachyon]
Length = 312
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%)
Query: 162 RSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVE 221
R+P + +F K +T SD VP++ AE FP + L +D G
Sbjct: 154 RTPAWAREVLFEKAVTPSDVGKLNRLVVPKQHAERHFPEPEKTTGSKGVLLNFEDGEGKV 213
Query: 222 WRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLF 258
WRFR+ Y + ++LT GWS FV +K L +GD ++F
Sbjct: 214 WRFRYSYWNSSQSYVLTKGWSRFVREKGLAAGDTIVF 250
>gi|414584846|tpg|DAA35417.1| TPA: hypothetical protein ZEAMMB73_535909 [Zea mays]
Length = 67
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 39/56 (69%), Gaps = 1/56 (1%)
Query: 713 LFNMEGLLRDPAK-GWRILYTDSENDVMVVGDDPWHEFCNEVSKIHIYTQEEVEKM 767
+F ++G L DP + GW++++ D ENDV+++GDDPW F N V I I + E+V KM
Sbjct: 1 MFGIKGQLDDPDRSGWQLVFVDRENDVLLLGDDPWESFVNSVWYIKILSPEDVHKM 56
>gi|357114324|ref|XP_003558950.1| PREDICTED: B3 domain-containing protein Os03g0120900-like
[Brachypodium distachyon]
Length = 311
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 65/148 (43%), Gaps = 25/148 (16%)
Query: 156 DEEGGGRSPTK-----STPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQ 210
+ +GGG S T HMF K +T SD +P++ AE FP LD +
Sbjct: 16 EHDGGGPSSTTDQVQVEKEHMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSTTAAAAS 74
Query: 211 ELVA-------KDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRG-- 261
+D G WRFR+ Y + +++T GWS FV +K L +GD V F RG
Sbjct: 75 TGGGGGLLLSFEDRTGKPWRFRYSYWNSSQSYVMTKGWSRFVKEKRLDAGDTVSFGRGVG 134
Query: 262 ---KDGELRLGIRRSVQPRNGLPDSILS 286
G L + RR PDS+ S
Sbjct: 135 SEAAKGRLFIDWRRR-------PDSMAS 155
>gi|30686674|ref|NP_181152.2| B3 domain-containing protein [Arabidopsis thaliana]
gi|330254109|gb|AEC09203.1| B3 domain-containing protein [Arabidopsis thaliana]
Length = 173
Score = 60.5 bits (145), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Query: 171 MFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVA--KDLHGVEWRFRHIY 228
+F K LT SD +P++ AE FP + L+ +D G WRFR+ Y
Sbjct: 37 LFEKPLTPSDVGKLNRLVIPKQHAERYFPLAAAAADAVEKGLLLCFEDEEGKPWRFRYSY 96
Query: 229 RGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKD--GELRLGIRR 272
+ ++LT GWS +V +K+L +GD VLF R + G +G RR
Sbjct: 97 WNSSQSYVLTKGWSRYVKEKHLDAGDVVLFHRHRSDGGRFFIGWRR 142
>gi|2281641|gb|AAC49774.1| AP2 domain containing protein RAP2.8 [Arabidopsis thaliana]
Length = 334
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/127 (34%), Positives = 61/127 (48%), Gaps = 9/127 (7%)
Query: 153 LGVDEEG--GGRSPT------KSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFP-PLDY 203
L VD G G S T K+ +F K +T SD +P++ AE FP P
Sbjct: 143 LSVDANGKRNGSSTTQNDKVLKTCEVLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLPSPS 202
Query: 204 KQQRPSQELVAKDLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKD 263
+ +D++G WRFR+ Y + ++LT GWS FV +KNL +GD V F R
Sbjct: 203 PAVTKGVLINFEDVNGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKNLRAGDVVTFERSTG 262
Query: 264 GELRLGI 270
E +L I
Sbjct: 263 LERQLYI 269
>gi|15228649|ref|NP_191756.1| B3 domain-containing transcription factor NGA2 [Arabidopsis
thaliana]
gi|75182616|sp|Q9M268.1|NGA2_ARATH RecName: Full=B3 domain-containing transcription factor NGA2;
AltName: Full=Protein NGATHA 2
gi|6899895|emb|CAB71904.1| RAV-like protein [Arabidopsis thaliana]
gi|108385265|gb|ABF85768.1| At3g61970 [Arabidopsis thaliana]
gi|227060687|gb|ACP18972.1| NGATHA2 [Arabidopsis thaliana]
gi|332646767|gb|AEE80288.1| B3 domain-containing transcription factor NGA2 [Arabidopsis
thaliana]
Length = 299
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 60/123 (48%), Gaps = 6/123 (4%)
Query: 163 SPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQE---LVAKDLHG 219
S + HMF K +T SD +P++ AE FP LD S + L +D G
Sbjct: 14 SSSMEREHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDNSTTNDSNKGLLLNFEDRSG 72
Query: 220 VEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNG 279
WRFR+ Y + +++T GWS FV K L +GD V F R + +L I +P+
Sbjct: 73 NSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRDSCNKDKLYIDWRRRPK-- 130
Query: 280 LPD 282
+PD
Sbjct: 131 IPD 133
>gi|449457654|ref|XP_004146563.1| PREDICTED: B3 domain-containing transcription factor NGA1-like
[Cucumis sativus]
Length = 345
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 46/91 (50%), Gaps = 1/91 (1%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKDLHGVEWRFRHIYR 229
HMF K +T SD +P++ AE FP LD L +D G WRFR+ Y
Sbjct: 65 HMFDKVVTPSDVGKLNRLVIPKQHAEKYFP-LDSSSNEKGLLLNFEDRCGKLWRFRYSYW 123
Query: 230 GQPRRHLLTTGWSIFVSQKNLVSGDAVLFLR 260
+ +++T GWS FV K L +GD V F R
Sbjct: 124 TSSQSYVMTKGWSRFVKDKRLDAGDIVSFQR 154
>gi|26450371|dbj|BAC42301.1| putative RAV [Arabidopsis thaliana]
Length = 299
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 60/123 (48%), Gaps = 6/123 (4%)
Query: 163 SPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQE---LVAKDLHG 219
S + HMF K +T SD +P++ AE FP LD S + L +D G
Sbjct: 14 SSSMEREHMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDNSTTNDSNKGLLLNFEDRSG 72
Query: 220 VEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNG 279
WRFR+ Y + +++T GWS FV K L +GD V F R + +L I +P+
Sbjct: 73 NSWRFRYSYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRDSCNKDKLYIDWRRRPK-- 130
Query: 280 LPD 282
+PD
Sbjct: 131 IPD 133
>gi|242081039|ref|XP_002445288.1| hypothetical protein SORBIDRAFT_07g007820 [Sorghum bicolor]
gi|241941638|gb|EES14783.1| hypothetical protein SORBIDRAFT_07g007820 [Sorghum bicolor]
Length = 270
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 46/93 (49%), Gaps = 2/93 (2%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVAKD--LHGVEWRFRHI 227
++F K LT +D +PR+ AE CFP + + + + G+ WRFR
Sbjct: 62 YLFGKILTTTDVGKMNRVLIPRQCAEGCFPKISEGNSGGDDDFLNFEDCSTGLIWRFRFC 121
Query: 228 YRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLR 260
+ +++ LT GW +++ KNL GD + F R
Sbjct: 122 LCNKSKKYFLTKGWHVYIKDKNLKKGDVLSFYR 154
>gi|413934037|gb|AFW68588.1| hypothetical protein ZEAMMB73_576107 [Zea mays]
gi|413950990|gb|AFW83639.1| hypothetical protein ZEAMMB73_082033 [Zea mays]
Length = 242
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 51/107 (47%), Gaps = 6/107 (5%)
Query: 163 SPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQE-----LVAKDL 217
SP + H+F K +T SD +P++ AE FP L E L +D
Sbjct: 44 SPACAREHLFDKAVTPSDVGKLNRLVIPKQHAERHFP-LHLAAAAGGGESTGVLLNLEDA 102
Query: 218 HGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDG 264
G WRFR+ Y + ++LT GWS FV +K L +GD V F R G
Sbjct: 103 AGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKGLQAGDVVGFYRSAAG 149
>gi|413917122|gb|AFW57054.1| hypothetical protein ZEAMMB73_040575 [Zea mays]
Length = 296
Score = 60.1 bits (144), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 50/100 (50%), Gaps = 2/100 (2%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPL-DYKQQRPSQELVAKDLH-GVEWRFRHI 227
++F K LT SD +PR+ AE FP + + K L +D G+ WRFR
Sbjct: 77 YLFSKVLTPSDVGKLNRLLIPRQCAEGFFPMISEVKSGGDDIFLNFEDTSTGLVWRFRFC 136
Query: 228 YRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELR 267
+ ++LT GWS+F+ +KNL GD + F R +R
Sbjct: 137 LWNNSKTYVLTKGWSVFIKEKNLKKGDILSFYRDASKSIR 176
>gi|297824785|ref|XP_002880275.1| indoleacetic acid-induced protein 20 [Arabidopsis lyrata subsp.
lyrata]
gi|297326114|gb|EFH56534.1| indoleacetic acid-induced protein 20 [Arabidopsis lyrata subsp.
lyrata]
Length = 167
Score = 60.1 bits (144), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 683 KVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDP-----AKGWRILYTDSEND 737
KV+ +G +GR IDL LNGY+DL+ L+ +FN L + K + Y D E D
Sbjct: 80 KVNMEGVPIGRKIDLMSLNGYHDLIRTLDFMFNASILWAEEEDMCNEKSHVLTYADKEGD 139
Query: 738 VMVVGDDPWHEFCNEVSKIHI 758
M+VGD PW F + V ++ I
Sbjct: 140 WMMVGDVPWEMFLSTVRRLKI 160
>gi|224099325|ref|XP_002311438.1| AP2 domain-containing transcription factor [Populus trichocarpa]
gi|222851258|gb|EEE88805.1| AP2 domain-containing transcription factor [Populus trichocarpa]
Length = 369
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 58/115 (50%), Gaps = 4/115 (3%)
Query: 157 EEGGGRSPTKSTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELV-AK 215
+ G GR K+ +F K +T SD +P++ AE FP L+ +
Sbjct: 191 DHGCGR-VLKAREQLFEKAVTPSDVGKLNRLVIPKQHAEKHFPLQSTSSCSTKGVLLNLE 249
Query: 216 DLHGVEWRFRHIYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLR--GKDGELRL 268
D+ G WRFR+ Y + ++LT GWS FV +K+L +GD V F R G D +L +
Sbjct: 250 DMSGKVWRFRYSYWNSSQSYVLTKGWSRFVKEKSLKAGDIVCFQRSTGPDKQLYI 304
>gi|326521754|dbj|BAK00453.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 773
Score = 59.7 bits (143), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 3/94 (3%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQELVA--KDLHGVEWRFRHI 227
HMF LT D VP++ AE FP LD R S+ +V +D G W F +
Sbjct: 539 HMFDTVLTRGDVGMLNRLVVPKKHAEKYFP-LDSSSTRTSKAIVLSFEDPAGKSWFFHYS 597
Query: 228 YRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRG 261
YR + +++ GW+ FV +K L +GD V F RG
Sbjct: 598 YRSSSQNYVMFKGWTGFVKEKFLEAGDTVSFSRG 631
>gi|297707663|gb|ADB93654.2| indole-3-acetic acid inducible 20 [Arabidopsis thaliana]
Length = 164
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 682 TKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDP-----AKGWRILYTDSEN 736
KV+ +G +GR IDL LNGY DL+ L+ +FN L + K + Y D E
Sbjct: 76 VKVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEEDMCNEKSHVLTYADKEG 135
Query: 737 DVMVVGDDPWHEFCNEVSKIHI 758
D M+VGD PW F + V ++ I
Sbjct: 136 DWMMVGDVPWEMFLSTVRRLKI 157
>gi|304322492|gb|ADL70733.1| indole-3-acetic acid inducible 20 [Arabidopsis thaliana]
Length = 168
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 682 TKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDP-----AKGWRILYTDSEN 736
KV+ +G +GR IDL LNGY DL+ L+ +FN L + K + Y D E
Sbjct: 84 VKVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEEDMCNEKSHVLTYADKEG 143
Query: 737 DVMVVGDDPWHEFCNEVSKIHI 758
D M+VGD PW F + V ++ I
Sbjct: 144 DWMMVGDVPWEMFLSTVRRLKI 165
>gi|304322470|gb|ADL70722.1| indole-3-acetic acid inducible 20 [Arabidopsis thaliana]
gi|304322476|gb|ADL70725.1| indole-3-acetic acid inducible 20 [Arabidopsis thaliana]
gi|304322488|gb|ADL70731.1| indole-3-acetic acid inducible 20 [Arabidopsis thaliana]
gi|304322494|gb|ADL70734.1| indole-3-acetic acid inducible 20 [Arabidopsis thaliana]
Length = 171
Score = 59.7 bits (143), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 682 TKVHKQGSLVGRAIDLWRLNGYNDLLSELEHLFNMEGLLRDP-----AKGWRILYTDSEN 736
KV+ +G +GR IDL LNGY DL+ L+ +FN L + K + Y D E
Sbjct: 87 VKVNMEGVPIGRKIDLMSLNGYRDLIRTLDFMFNASILWAEEEDMCNEKSHVLTYADKEG 146
Query: 737 DVMVVGDDPWHEFCNEVSKIHI 758
D M+VGD PW F + V ++ I
Sbjct: 147 DWMMVGDVPWEMFLSTVRRLKI 168
>gi|21618252|gb|AAM67302.1| RAV-like protein [Arabidopsis thaliana]
Length = 283
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Query: 170 HMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYKQQRPSQE---LVAKDLHGVEWRFRH 226
HMF K +T SD +P++ AE FP LD S + L +D G WRFR+
Sbjct: 5 HMFDKVVTPSDVGKLNRLVIPKQHAERYFP-LDNSTTNDSNKGLLLNFEDRSGNSWRFRY 63
Query: 227 IYRGQPRRHLLTTGWSIFVSQKNLVSGDAVLFLRGKDGELRLGIRRSVQPRNGLPD 282
Y + +++T GWS FV K L +GD V F R + +L I +P+ +PD
Sbjct: 64 SYWNSSQSYVMTKGWSRFVKDKKLDAGDIVSFQRDSCNKDKLYIDWRRRPK--IPD 117
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.133 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,155,020,804
Number of Sequences: 23463169
Number of extensions: 571329652
Number of successful extensions: 1904402
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1159
Number of HSP's successfully gapped in prelim test: 712
Number of HSP's that attempted gapping in prelim test: 1896918
Number of HSP's gapped (non-prelim): 4066
length of query: 808
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 657
effective length of database: 8,816,256,848
effective search space: 5792280749136
effective search space used: 5792280749136
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 81 (35.8 bits)