Query 003594
Match_columns 808
No_of_seqs 797 out of 3858
Neff 7.8
Searched_HMMs 46136
Date Fri Mar 29 02:23:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003594.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003594hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1187 Serine/threonine prote 100.0 6.9E-46 1.5E-50 409.1 22.8 249 447-706 61-354 (361)
2 KOG0192 Tyrosine kinase specif 100.0 1.3E-40 2.8E-45 365.0 23.2 223 470-709 49-308 (362)
3 KOG0581 Mitogen-activated prot 100.0 6.3E-41 1.4E-45 351.4 15.9 220 467-700 84-335 (364)
4 KOG0197 Tyrosine kinases [Sign 100.0 1.9E-40 4.2E-45 362.7 18.8 221 468-706 212-463 (468)
5 KOG0575 Polo-like serine/threo 100.0 2.8E-39 6.1E-44 356.7 19.6 218 462-700 18-269 (592)
6 KOG0615 Serine/threonine prote 100.0 2.4E-39 5.1E-44 341.1 13.5 224 458-700 168-437 (475)
7 KOG0591 NIMA (never in mitosis 100.0 1.3E-38 2.9E-43 320.3 11.4 219 467-698 24-279 (375)
8 KOG0595 Serine/threonine-prote 100.0 2.1E-37 4.5E-42 327.2 17.9 216 461-697 10-265 (429)
9 KOG0598 Ribosomal protein S6 k 100.0 4.4E-37 9.5E-42 322.5 16.3 212 461-693 25-270 (357)
10 KOG0605 NDR and related serine 100.0 9.9E-36 2.1E-40 323.8 25.5 212 460-693 140-435 (550)
11 KOG1026 Nerve growth factor re 100.0 4.1E-37 8.8E-42 351.6 15.3 230 469-708 493-766 (774)
12 PHA02988 hypothetical protein; 100.0 3.4E-36 7.4E-41 323.7 21.7 234 447-705 11-280 (283)
13 KOG0592 3-phosphoinositide-dep 100.0 9.5E-37 2.1E-41 331.2 16.7 211 468-699 79-337 (604)
14 KOG0193 Serine/threonine prote 100.0 4.6E-37 1E-41 337.2 12.6 221 467-707 397-656 (678)
15 KOG4721 Serine/threonine prote 100.0 8.5E-37 1.8E-41 330.3 12.3 225 447-704 117-368 (904)
16 KOG0198 MEKK and related serin 100.0 3.4E-36 7.3E-41 321.0 15.6 220 466-702 21-278 (313)
17 cd05102 PTKc_VEGFR3 Catalytic 100.0 1.1E-35 2.3E-40 327.6 19.8 231 467-706 12-336 (338)
18 KOG1095 Protein tyrosine kinas 100.0 1.9E-35 4.2E-40 349.2 20.2 232 466-710 696-967 (1025)
19 KOG0593 Predicted protein kina 100.0 8E-36 1.7E-40 303.1 14.6 220 465-699 5-283 (396)
20 KOG0597 Serine-threonine prote 100.0 1.4E-35 3E-40 321.5 15.7 211 467-699 7-250 (808)
21 KOG0196 Tyrosine kinase, EPH ( 100.0 2.6E-36 5.5E-41 337.8 10.1 245 448-711 607-898 (996)
22 KOG0600 Cdc2-related protein k 100.0 3E-35 6.5E-40 317.2 17.2 217 466-699 121-399 (560)
23 PF07714 Pkinase_Tyr: Protein 100.0 6.6E-35 1.4E-39 309.3 17.2 216 468-701 5-259 (259)
24 cd05064 PTKc_EphR_A10 Catalyti 100.0 2.3E-34 4.9E-39 306.1 21.2 219 467-704 10-265 (266)
25 cd05108 PTKc_EGFR Catalytic do 100.0 1.8E-34 3.8E-39 315.1 20.8 222 467-708 12-272 (316)
26 cd05571 STKc_PKB Catalytic dom 100.0 7.1E-35 1.5E-39 319.5 17.6 210 469-699 2-250 (323)
27 KOG4278 Protein tyrosine kinas 100.0 4.6E-35 9.9E-40 318.8 15.4 232 454-705 260-524 (1157)
28 KOG0194 Protein tyrosine kinas 100.0 3.8E-35 8.3E-40 326.1 15.1 224 468-710 163-426 (474)
29 KOG4257 Focal adhesion tyrosin 100.0 1.1E-34 2.3E-39 316.9 17.6 221 467-706 394-651 (974)
30 KOG0659 Cdk activating kinase 100.0 1.9E-34 4.2E-39 288.9 17.7 219 466-700 6-281 (318)
31 KOG0616 cAMP-dependent protein 100.0 9.8E-35 2.1E-39 294.9 15.3 205 466-691 48-283 (355)
32 KOG0583 Serine/threonine prote 100.0 3.1E-34 6.7E-39 317.2 19.9 223 462-706 17-280 (370)
33 cd05612 STKc_PRKX_like Catalyt 100.0 2.1E-34 4.6E-39 310.8 18.2 212 467-699 6-253 (291)
34 cd05631 STKc_GRK4 Catalytic do 100.0 3E-34 6.5E-39 308.6 18.8 218 467-699 5-260 (285)
35 cd05116 PTKc_Syk Catalytic dom 100.0 6E-34 1.3E-38 301.0 20.7 215 469-703 2-254 (257)
36 cd05595 STKc_PKB_beta Catalyti 100.0 2.2E-34 4.7E-39 315.6 17.8 210 469-699 2-250 (323)
37 cd05052 PTKc_Abl Catalytic dom 100.0 1.1E-33 2.4E-38 300.0 22.4 219 468-704 12-262 (263)
38 KOG1989 ARK protein kinase fam 100.0 5.2E-34 1.1E-38 327.8 21.0 222 467-708 42-315 (738)
39 cd05585 STKc_YPK1_like Catalyt 100.0 2.8E-34 6E-39 313.1 17.9 209 470-699 1-243 (312)
40 cd05593 STKc_PKB_gamma Catalyt 100.0 3.3E-34 7.2E-39 314.9 18.7 211 469-700 2-251 (328)
41 KOG0578 p21-activated serine/t 100.0 1.5E-34 3.3E-39 316.9 15.8 212 467-699 278-522 (550)
42 KOG0661 MAPK related serine/th 100.0 6.9E-35 1.5E-39 312.3 12.7 218 468-700 16-291 (538)
43 KOG0582 Ste20-like serine/thre 100.0 6.1E-34 1.3E-38 302.9 19.6 217 465-699 29-292 (516)
44 KOG0580 Serine/threonine prote 100.0 1.4E-34 3.1E-39 286.0 13.7 216 466-700 26-273 (281)
45 cd05114 PTKc_Tec_Rlk Catalytic 100.0 1.1E-33 2.5E-38 298.5 21.6 215 468-701 10-255 (256)
46 cd05115 PTKc_Zap-70 Catalytic 100.0 1.1E-33 2.3E-38 299.5 21.5 216 470-704 3-255 (257)
47 PTZ00263 protein kinase A cata 100.0 4.2E-34 9.2E-39 314.2 18.6 206 467-693 23-259 (329)
48 cd05104 PTKc_Kit Catalytic dom 100.0 5.4E-34 1.2E-38 319.1 19.8 228 467-703 40-373 (375)
49 cd05082 PTKc_Csk Catalytic dom 100.0 1.3E-33 2.8E-38 298.0 21.1 218 468-703 12-255 (256)
50 cd05084 PTKc_Fes Catalytic dom 100.0 1.1E-33 2.4E-38 297.7 20.3 215 469-702 2-251 (252)
51 KOG0588 Serine/threonine prote 100.0 3E-34 6.5E-39 317.3 16.3 213 468-701 18-264 (786)
52 cd05096 PTKc_DDR1 Catalytic do 100.0 8.4E-34 1.8E-38 307.8 19.6 230 468-702 11-303 (304)
53 cd05075 PTKc_Axl Catalytic dom 100.0 1.8E-33 3.9E-38 299.3 21.1 223 468-704 5-271 (272)
54 cd05106 PTKc_CSF-1R Catalytic 100.0 1.1E-33 2.4E-38 316.3 19.9 233 462-705 39-373 (374)
55 KOG0585 Ca2+/calmodulin-depend 100.0 8.7E-34 1.9E-38 303.3 17.5 218 468-706 103-378 (576)
56 cd05060 PTKc_Syk_like Catalyti 100.0 3.6E-33 7.8E-38 294.8 22.1 216 469-704 2-255 (257)
57 cd05072 PTKc_Lyn Catalytic dom 100.0 2.3E-33 4.9E-38 296.9 20.6 218 468-703 12-260 (261)
58 cd05113 PTKc_Btk_Bmx Catalytic 100.0 3E-33 6.6E-38 295.7 21.1 216 468-702 10-256 (256)
59 cd05570 STKc_PKC Catalytic dom 100.0 3.3E-33 7.2E-38 305.6 22.1 205 469-694 2-241 (318)
60 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 2.8E-33 6.1E-38 300.2 21.0 228 462-705 4-282 (283)
61 cd05111 PTK_HER3 Pseudokinase 100.0 4.2E-33 9.1E-38 298.6 22.2 220 467-706 12-270 (279)
62 cd05048 PTKc_Ror Catalytic Dom 100.0 1.6E-33 3.6E-38 301.6 18.9 226 468-703 11-282 (283)
63 cd05594 STKc_PKB_alpha Catalyt 100.0 7.2E-34 1.6E-38 311.7 16.5 211 469-699 2-251 (325)
64 cd05109 PTKc_HER2 Catalytic do 100.0 3.5E-33 7.6E-38 298.8 21.0 222 467-708 12-272 (279)
65 PTZ00426 cAMP-dependent protei 100.0 1.6E-33 3.4E-38 311.1 18.7 215 462-698 31-282 (340)
66 cd05035 PTKc_Axl_like Catalyti 100.0 3.7E-33 8.1E-38 296.6 21.0 224 467-704 4-272 (273)
67 cd05033 PTKc_EphR Catalytic do 100.0 3.6E-33 7.8E-38 296.4 20.8 224 461-704 4-265 (266)
68 cd05059 PTKc_Tec_like Catalyti 100.0 4E-33 8.6E-38 294.5 20.9 215 468-701 10-255 (256)
69 cd05068 PTKc_Frk_like Catalyti 100.0 4E-33 8.7E-38 295.2 20.7 218 468-703 12-260 (261)
70 KOG2345 Serine/threonine prote 100.0 7.4E-34 1.6E-38 282.1 13.7 228 464-704 23-300 (302)
71 cd05584 STKc_p70S6K Catalytic 100.0 1.9E-33 4.1E-38 308.1 18.3 211 468-699 2-255 (323)
72 cd05062 PTKc_IGF-1R Catalytic 100.0 3.8E-33 8.3E-38 298.2 20.0 233 459-702 4-276 (277)
73 cd05071 PTKc_Src Catalytic dom 100.0 8.3E-33 1.8E-37 293.4 22.4 219 468-704 12-260 (262)
74 cd05592 STKc_nPKC_theta_delta 100.0 7.7E-33 1.7E-37 302.4 22.7 207 469-696 2-243 (316)
75 cd05093 PTKc_TrkB Catalytic do 100.0 6.2E-33 1.3E-37 298.6 21.6 230 468-707 11-282 (288)
76 cd05590 STKc_nPKC_eta Catalyti 100.0 2.4E-33 5.2E-38 307.0 18.7 207 469-696 2-243 (320)
77 cd05039 PTKc_Csk_like Catalyti 100.0 5.1E-33 1.1E-37 293.3 20.5 218 468-703 12-255 (256)
78 cd05591 STKc_nPKC_epsilon Cata 100.0 2.5E-33 5.3E-38 306.9 18.6 204 469-693 2-240 (321)
79 cd05148 PTKc_Srm_Brk Catalytic 100.0 4.1E-33 8.9E-38 294.7 19.7 218 468-703 12-260 (261)
80 cd05105 PTKc_PDGFR_alpha Catal 100.0 4.2E-33 9.2E-38 313.8 20.9 229 468-705 43-398 (400)
81 KOG1151 Tousled-like protein k 100.0 8.7E-33 1.9E-37 291.6 21.5 284 383-698 401-739 (775)
82 cd05083 PTKc_Chk Catalytic dom 100.0 5.3E-33 1.2E-37 293.0 20.1 217 468-702 12-252 (254)
83 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 7.8E-33 1.7E-37 292.8 21.4 218 468-703 12-259 (260)
84 cd05047 PTKc_Tie Catalytic dom 100.0 8.2E-33 1.8E-37 294.6 21.2 227 469-705 2-269 (270)
85 cd05094 PTKc_TrkC Catalytic do 100.0 6.9E-33 1.5E-37 298.7 20.8 229 468-706 11-284 (291)
86 cd05069 PTKc_Yes Catalytic dom 100.0 1.3E-32 2.9E-37 291.1 22.7 218 468-703 12-259 (260)
87 cd05608 STKc_GRK1 Catalytic do 100.0 3.9E-33 8.5E-38 299.1 18.8 212 470-694 1-246 (280)
88 cd05063 PTKc_EphR_A2 Catalytic 100.0 7.7E-33 1.7E-37 294.0 20.7 224 461-704 5-267 (268)
89 cd05085 PTKc_Fer Catalytic dom 100.0 7.9E-33 1.7E-37 290.6 20.5 215 469-702 2-249 (250)
90 cd05588 STKc_aPKC Catalytic do 100.0 2.8E-33 6.2E-38 307.6 17.8 211 469-694 2-250 (329)
91 cd05582 STKc_RSK_N N-terminal 100.0 1.2E-33 2.6E-38 308.9 14.5 208 468-696 2-245 (318)
92 PTZ00267 NIMA-related protein 100.0 4.6E-33 9.9E-38 321.2 20.0 220 464-699 69-322 (478)
93 KOG0663 Protein kinase PITSLRE 100.0 2.9E-33 6.4E-38 287.9 16.2 222 461-699 76-360 (419)
94 cd05058 PTKc_Met_Ron Catalytic 100.0 9.3E-33 2E-37 292.2 20.7 218 469-705 2-260 (262)
95 cd05067 PTKc_Lck_Blk Catalytic 100.0 9.2E-33 2E-37 292.2 20.6 218 468-703 12-259 (260)
96 cd05089 PTKc_Tie1 Catalytic do 100.0 9.8E-33 2.1E-37 298.5 21.2 232 468-709 8-280 (297)
97 cd05589 STKc_PKN Catalytic dom 100.0 1.1E-32 2.3E-37 302.2 21.7 206 467-694 4-246 (324)
98 cd05110 PTKc_HER4 Catalytic do 100.0 1.6E-32 3.4E-37 297.8 22.8 223 466-708 11-272 (303)
99 cd05619 STKc_nPKC_theta Cataly 100.0 5.5E-33 1.2E-37 303.6 19.1 206 469-695 2-242 (316)
100 cd05045 PTKc_RET Catalytic dom 100.0 1E-32 2.2E-37 297.1 20.9 228 468-706 6-288 (290)
101 cd05629 STKc_NDR_like_fungal C 100.0 3.3E-33 7.1E-38 312.9 17.6 215 467-700 6-305 (377)
102 cd05618 STKc_aPKC_iota Catalyt 100.0 3.4E-33 7.4E-38 307.0 17.4 211 469-694 2-250 (329)
103 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 3.3E-33 7.1E-38 307.4 17.3 214 467-700 6-257 (333)
104 cd05575 STKc_SGK Catalytic dom 100.0 3.7E-33 8.1E-38 305.8 17.6 209 469-698 2-245 (323)
105 cd06649 PKc_MEK2 Catalytic dom 100.0 8.9E-33 1.9E-37 303.9 20.5 225 462-701 6-302 (331)
106 cd07869 STKc_PFTAIRE1 Catalyti 100.0 7.9E-33 1.7E-37 300.1 19.9 222 461-699 5-287 (303)
107 cd05626 STKc_LATS2 Catalytic d 100.0 3.9E-33 8.4E-38 312.8 17.8 217 465-699 4-304 (381)
108 cd05049 PTKc_Trk Catalytic dom 100.0 1.1E-32 2.5E-37 294.4 20.6 225 468-702 11-279 (280)
109 cd05603 STKc_SGK2 Catalytic do 100.0 9E-33 2E-37 302.4 20.2 206 469-695 2-242 (321)
110 KOG0611 Predicted serine/threo 100.0 2.1E-33 4.6E-38 293.7 14.3 213 467-701 58-304 (668)
111 cd05091 PTKc_Ror2 Catalytic do 100.0 1.5E-32 3.2E-37 294.4 21.4 225 468-702 11-281 (283)
112 PLN00034 mitogen-activated pro 100.0 3.2E-33 7E-38 310.2 16.8 212 468-700 80-328 (353)
113 cd07848 STKc_CDKL5 Catalytic d 100.0 9.6E-33 2.1E-37 296.5 19.6 218 467-699 6-283 (287)
114 cd05620 STKc_nPKC_delta Cataly 100.0 7.4E-33 1.6E-37 302.6 19.0 206 469-695 2-242 (316)
115 cd05628 STKc_NDR1 Catalytic do 100.0 1.6E-32 3.4E-37 305.9 21.9 215 467-700 6-293 (363)
116 cd05088 PTKc_Tie2 Catalytic do 100.0 1.2E-32 2.7E-37 298.8 20.2 231 468-708 13-284 (303)
117 cd05042 PTKc_Aatyk Catalytic d 100.0 1.3E-32 2.9E-37 292.5 20.1 217 469-701 2-267 (269)
118 cd05054 PTKc_VEGFR Catalytic d 100.0 9.1E-33 2E-37 304.7 19.4 231 467-706 12-335 (337)
119 cd05605 STKc_GRK4_like Catalyt 100.0 8.9E-33 1.9E-37 297.1 18.7 218 467-699 5-260 (285)
120 cd07859 STKc_TDY_MAPK_plant Ca 100.0 8.1E-33 1.8E-37 304.2 18.7 218 467-700 5-290 (338)
121 cd05607 STKc_GRK7 Catalytic do 100.0 1.3E-32 2.7E-37 294.7 19.7 218 470-701 1-251 (277)
122 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.8E-32 3.9E-37 293.1 20.8 229 460-702 5-276 (277)
123 cd05090 PTKc_Ror1 Catalytic do 100.0 2.2E-32 4.7E-37 293.3 21.5 225 468-702 11-281 (283)
124 cd05032 PTKc_InsR_like Catalyt 100.0 1E-32 2.3E-37 294.2 19.0 225 468-702 12-276 (277)
125 KOG0201 Serine/threonine prote 100.0 3.6E-34 7.8E-39 304.8 7.5 212 468-699 19-262 (467)
126 cd05066 PTKc_EphR_A Catalytic 100.0 2.1E-32 4.5E-37 290.9 21.0 219 467-704 9-266 (267)
127 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.5E-32 3.2E-37 294.5 20.0 224 467-704 9-283 (284)
128 cd05043 PTK_Ryk Pseudokinase d 100.0 2.3E-32 5E-37 292.4 21.4 233 461-706 6-278 (280)
129 cd05061 PTKc_InsR Catalytic do 100.0 2.1E-32 4.4E-37 294.5 21.0 234 460-704 5-278 (288)
130 cd05587 STKc_cPKC Catalytic do 100.0 2.5E-32 5.4E-37 299.3 21.9 207 467-694 5-246 (324)
131 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.3E-32 2.7E-37 296.4 19.1 218 467-699 10-284 (288)
132 cd05614 STKc_MSK2_N N-terminal 100.0 7.6E-33 1.7E-37 304.3 17.6 216 467-699 5-266 (332)
133 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 3E-32 6.5E-37 288.6 21.5 229 462-705 3-266 (267)
134 cd05056 PTKc_FAK Catalytic dom 100.0 2.2E-32 4.7E-37 291.1 20.4 220 468-706 12-267 (270)
135 KOG0589 Serine/threonine prote 100.0 3.3E-33 7.2E-38 305.1 14.4 218 465-700 7-258 (426)
136 cd00192 PTKc Catalytic domain 100.0 2.5E-32 5.4E-37 287.4 20.7 223 469-702 2-262 (262)
137 cd08228 STKc_Nek6 Catalytic do 100.0 2E-32 4.3E-37 290.4 20.0 224 467-705 7-266 (267)
138 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1.8E-32 4E-37 291.6 19.7 218 469-702 2-268 (269)
139 PTZ00283 serine/threonine prot 100.0 1.1E-32 2.4E-37 318.7 19.5 228 456-700 27-297 (496)
140 cd08529 STKc_FA2-like Catalyti 100.0 2.4E-32 5.2E-37 287.5 20.4 214 468-699 6-252 (256)
141 cd05107 PTKc_PDGFR_beta Cataly 100.0 2.5E-32 5.3E-37 307.6 21.6 229 467-705 42-400 (401)
142 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 2.2E-32 4.8E-37 293.5 19.7 229 462-704 4-283 (284)
143 cd05604 STKc_SGK3 Catalytic do 100.0 8E-33 1.7E-37 303.4 16.6 212 469-701 2-248 (325)
144 cd06624 STKc_ASK Catalytic dom 100.0 1.6E-32 3.4E-37 291.8 18.4 227 455-699 2-264 (268)
145 cd07862 STKc_CDK6 Catalytic do 100.0 2.4E-32 5.1E-37 293.9 19.8 213 468-699 7-286 (290)
146 cd05623 STKc_MRCK_alpha Cataly 100.0 3E-32 6.6E-37 299.8 21.0 217 467-700 6-266 (332)
147 cd05597 STKc_DMPK_like Catalyt 100.0 4.6E-32 9.9E-37 298.3 22.3 217 467-700 6-266 (331)
148 KOG1094 Discoidin domain recep 100.0 6.7E-33 1.5E-37 301.7 15.3 221 469-704 545-804 (807)
149 cd05065 PTKc_EphR_B Catalytic 100.0 3.5E-32 7.6E-37 289.3 20.3 219 467-704 9-268 (269)
150 cd05034 PTKc_Src_like Catalyti 100.0 5E-32 1.1E-36 286.4 21.4 218 468-703 12-260 (261)
151 cd05616 STKc_cPKC_beta Catalyt 100.0 1.7E-32 3.6E-37 300.6 18.2 207 467-694 5-246 (323)
152 cd05092 PTKc_TrkA Catalytic do 100.0 2.8E-32 6E-37 292.3 19.5 225 468-702 11-279 (280)
153 KOG0694 Serine/threonine prote 100.0 1.1E-32 2.4E-37 307.6 16.9 213 459-694 366-613 (694)
154 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 2.9E-32 6.3E-37 291.5 19.3 223 468-704 10-283 (284)
155 cd05617 STKc_aPKC_zeta Catalyt 100.0 1.2E-32 2.6E-37 302.4 16.7 212 469-695 2-249 (327)
156 cd05053 PTKc_FGFR Catalytic do 100.0 2.9E-32 6.3E-37 293.6 19.3 234 461-705 12-292 (293)
157 cd05098 PTKc_FGFR1 Catalytic d 100.0 3.8E-32 8.3E-37 295.3 20.4 231 467-707 23-302 (307)
158 cd05602 STKc_SGK1 Catalytic do 100.0 1.5E-32 3.3E-37 301.2 17.3 211 469-700 2-247 (325)
159 cd05101 PTKc_FGFR2 Catalytic d 100.0 5.5E-32 1.2E-36 293.5 21.6 230 468-707 21-299 (304)
160 KOG0658 Glycogen synthase kina 100.0 2.4E-33 5.1E-38 293.8 10.3 227 467-707 29-315 (364)
161 cd05103 PTKc_VEGFR2 Catalytic 100.0 3.7E-32 8E-37 300.5 20.5 231 467-706 12-341 (343)
162 cd06650 PKc_MEK1 Catalytic dom 100.0 4.3E-32 9.4E-37 298.8 20.6 225 461-700 5-299 (333)
163 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 2.1E-32 4.4E-37 292.7 17.4 212 469-701 2-273 (274)
164 KOG4279 Serine/threonine prote 100.0 3.9E-33 8.6E-38 307.1 12.0 214 468-699 581-831 (1226)
165 cd06643 STKc_SLK Catalytic dom 100.0 4E-32 8.7E-37 291.1 19.2 220 461-699 4-261 (282)
166 cd08229 STKc_Nek7 Catalytic do 100.0 3.8E-32 8.3E-37 288.3 18.8 224 468-705 8-266 (267)
167 cd05050 PTKc_Musk Catalytic do 100.0 7.1E-32 1.5E-36 290.1 21.1 231 461-702 5-287 (288)
168 cd06637 STKc_TNIK Catalytic do 100.0 3.6E-32 7.9E-37 289.3 18.6 223 458-699 3-268 (272)
169 cd05055 PTKc_PDGFR Catalytic d 100.0 6.5E-32 1.4E-36 293.1 20.9 225 461-704 35-301 (302)
170 cd05599 STKc_NDR_like Catalyti 100.0 1.6E-32 3.4E-37 305.7 16.3 212 467-699 6-295 (364)
171 cd06642 STKc_STK25-YSK1 Cataly 100.0 4E-32 8.6E-37 290.3 18.8 215 465-700 7-253 (277)
172 cd05622 STKc_ROCK1 Catalytic d 100.0 4.4E-32 9.5E-37 303.2 19.8 226 456-701 38-305 (371)
173 cd06625 STKc_MEKK3_like Cataly 100.0 6.1E-32 1.3E-36 285.8 19.9 219 462-700 3-260 (263)
174 cd05596 STKc_ROCK Catalytic do 100.0 2.5E-32 5.5E-37 305.0 17.9 221 460-700 42-304 (370)
175 cd05044 PTKc_c-ros Catalytic d 100.0 4.3E-32 9.3E-37 288.2 18.7 221 469-702 2-268 (269)
176 cd05073 PTKc_Hck Catalytic dom 100.0 7.3E-32 1.6E-36 285.5 20.4 219 467-703 11-259 (260)
177 cd05057 PTKc_EGFR_like Catalyt 100.0 9.7E-32 2.1E-36 287.6 21.5 222 467-707 12-271 (279)
178 cd05040 PTKc_Ack_like Catalyti 100.0 1E-31 2.2E-36 283.3 21.3 216 469-702 2-256 (257)
179 cd05099 PTKc_FGFR4 Catalytic d 100.0 8.9E-32 1.9E-36 293.5 21.2 230 468-707 18-296 (314)
180 cd05112 PTKc_Itk Catalytic dom 100.0 1.1E-31 2.4E-36 282.9 21.3 215 468-701 10-255 (256)
181 cd05086 PTKc_Aatyk2 Catalytic 100.0 1E-31 2.2E-36 286.0 21.0 216 469-701 2-266 (268)
182 PTZ00266 NIMA-related protein 100.0 4.6E-32 9.9E-37 324.2 20.1 225 461-699 13-294 (1021)
183 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 7.6E-32 1.7E-36 286.3 19.6 212 469-701 2-261 (262)
184 cd05630 STKc_GRK6 Catalytic do 100.0 5E-32 1.1E-36 291.4 18.1 218 467-699 5-260 (285)
185 PTZ00036 glycogen synthase kin 100.0 5.3E-32 1.2E-36 309.0 19.3 221 466-700 70-351 (440)
186 cd05632 STKc_GRK5 Catalytic do 100.0 7.7E-32 1.7E-36 289.9 19.4 214 467-695 5-251 (285)
187 cd05621 STKc_ROCK2 Catalytic d 100.0 3.3E-32 7.2E-37 304.0 17.1 220 461-700 43-304 (370)
188 cd05573 STKc_ROCK_NDR_like Cat 100.0 2.1E-32 4.6E-37 302.7 15.4 213 467-700 6-285 (350)
189 cd05074 PTKc_Tyro3 Catalytic d 100.0 1.3E-31 2.9E-36 285.1 20.8 223 468-704 5-272 (273)
190 cd05615 STKc_cPKC_alpha Cataly 100.0 5.6E-32 1.2E-36 296.6 18.4 208 467-695 5-247 (323)
191 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 9.4E-32 2E-36 283.5 19.4 212 469-701 2-258 (259)
192 cd05625 STKc_LATS1 Catalytic d 100.0 3.1E-32 6.7E-37 305.5 16.5 213 466-699 5-304 (382)
193 cd08219 STKc_Nek3 Catalytic do 100.0 8.9E-32 1.9E-36 283.7 18.8 216 467-700 5-252 (255)
194 cd05041 PTKc_Fes_like Catalyti 100.0 2.3E-31 5.1E-36 279.6 21.8 214 469-702 2-250 (251)
195 cd05095 PTKc_DDR2 Catalytic do 100.0 1.4E-31 2.9E-36 289.3 20.5 231 467-702 10-295 (296)
196 PHA03212 serine/threonine kina 100.0 8E-32 1.7E-36 302.9 19.0 214 466-699 96-375 (391)
197 cd06646 STKc_MAP4K5 Catalytic 100.0 4.5E-32 9.7E-37 287.9 16.1 214 467-700 14-265 (267)
198 cd05598 STKc_LATS Catalytic do 100.0 3E-32 6.5E-37 304.9 15.5 213 467-700 6-301 (376)
199 cd05624 STKc_MRCK_beta Catalyt 100.0 1.4E-31 3.1E-36 294.3 20.3 217 467-700 6-266 (331)
200 cd05097 PTKc_DDR_like Catalyti 100.0 1E-31 2.3E-36 290.0 18.8 230 468-702 11-294 (295)
201 cd07868 STKc_CDK8 Catalytic do 100.0 2.1E-31 4.7E-36 290.5 21.4 171 467-642 6-217 (317)
202 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 3.9E-32 8.5E-37 287.4 15.0 213 469-702 2-258 (258)
203 KOG0660 Mitogen-activated prot 100.0 5.9E-32 1.3E-36 282.8 15.9 217 467-699 27-309 (359)
204 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 1.2E-31 2.6E-36 287.8 18.9 221 467-700 6-262 (286)
205 cd05051 PTKc_DDR Catalytic dom 100.0 1.4E-31 2.9E-36 288.7 18.9 225 468-702 11-295 (296)
206 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.5E-31 3.2E-36 291.0 19.3 218 467-699 11-285 (309)
207 cd05601 STKc_CRIK Catalytic do 100.0 3E-32 6.5E-37 299.3 14.0 212 468-699 7-262 (330)
208 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.9E-31 4.2E-36 282.9 19.6 212 468-699 6-263 (267)
209 cd05100 PTKc_FGFR3 Catalytic d 100.0 2.2E-31 4.7E-36 293.1 20.7 231 467-707 17-296 (334)
210 cd06654 STKc_PAK1 Catalytic do 100.0 1.5E-31 3.3E-36 289.3 19.0 212 468-699 26-269 (296)
211 KOG0199 ACK and related non-re 100.0 3.5E-32 7.7E-37 300.7 14.0 217 467-701 115-369 (1039)
212 cd06640 STKc_MST4 Catalytic do 100.0 2E-31 4.4E-36 285.0 19.5 216 464-700 6-253 (277)
213 cd06639 STKc_myosinIIIB Cataly 100.0 2.2E-31 4.8E-36 286.7 19.4 232 451-699 12-286 (291)
214 cd05586 STKc_Sck1_like Catalyt 100.0 4E-32 8.7E-37 298.4 13.8 209 470-699 1-248 (330)
215 KOG0610 Putative serine/threon 100.0 2.4E-31 5.3E-36 281.2 19.0 209 467-693 82-381 (459)
216 cd06631 STKc_YSK4 Catalytic do 100.0 2.4E-31 5.2E-36 282.0 19.2 212 468-699 6-261 (265)
217 cd07853 STKc_NLK Catalytic dom 100.0 1.4E-31 3E-36 299.2 18.2 218 467-700 5-288 (372)
218 cd08223 STKc_Nek4 Catalytic do 100.0 3.8E-31 8.3E-36 278.7 20.6 215 467-699 5-253 (257)
219 cd08227 PK_STRAD_alpha Pseudok 100.0 2E-31 4.4E-36 292.5 19.0 219 468-699 4-306 (327)
220 cd06638 STKc_myosinIIIA Cataly 100.0 1.3E-31 2.8E-36 287.3 16.9 233 451-700 8-283 (286)
221 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 2.4E-31 5.1E-36 285.6 18.9 224 468-705 11-271 (284)
222 KOG1025 Epidermal growth facto 100.0 1.5E-31 3.2E-36 300.3 17.8 226 467-712 701-965 (1177)
223 cd08221 STKc_Nek9 Catalytic do 100.0 3.3E-31 7.1E-36 279.3 19.6 216 467-700 5-253 (256)
224 cd08217 STKc_Nek2 Catalytic do 100.0 2.8E-31 6.2E-36 280.1 18.8 219 468-699 6-261 (265)
225 cd06615 PKc_MEK Catalytic doma 100.0 3.2E-31 6.9E-36 288.4 19.5 225 462-701 2-288 (308)
226 cd06612 STKc_MST1_2 Catalytic 100.0 3.6E-31 7.7E-36 278.6 19.2 213 468-699 9-252 (256)
227 cd06655 STKc_PAK2 Catalytic do 100.0 3.8E-31 8.2E-36 286.3 19.7 211 468-699 25-268 (296)
228 KOG0599 Phosphorylase kinase g 100.0 5.1E-32 1.1E-36 271.3 11.8 212 468-700 23-283 (411)
229 cd05046 PTK_CCK4 Pseudokinase 100.0 6.2E-31 1.3E-35 280.4 21.0 224 468-702 11-274 (275)
230 cd07867 STKc_CDC2L6 Catalytic 100.0 5.6E-31 1.2E-35 286.9 21.0 225 468-699 7-313 (317)
231 cd08218 STKc_Nek1 Catalytic do 100.0 5.6E-31 1.2E-35 277.5 20.2 215 467-699 5-252 (256)
232 smart00219 TyrKc Tyrosine kina 100.0 5.4E-31 1.2E-35 277.1 19.9 216 468-701 5-258 (258)
233 cd06619 PKc_MKK5 Catalytic dom 100.0 4.5E-31 9.7E-36 282.8 19.4 215 467-700 6-253 (279)
234 KOG0594 Protein kinase PCTAIRE 100.0 4E-31 8.7E-36 277.6 18.5 218 469-700 18-302 (323)
235 cd07876 STKc_JNK2 Catalytic do 100.0 4.2E-31 9.2E-36 293.8 19.9 221 461-700 21-315 (359)
236 cd06641 STKc_MST3 Catalytic do 100.0 5.4E-31 1.2E-35 281.7 20.0 215 465-700 7-253 (277)
237 cd07861 STKc_CDK1_euk Catalyti 100.0 2.7E-31 5.8E-36 284.6 17.5 219 468-699 6-281 (285)
238 cd06632 STKc_MEKK1_plant Catal 100.0 5.3E-31 1.1E-35 277.4 19.5 212 468-699 6-254 (258)
239 cd06644 STKc_STK10_LOK Catalyt 100.0 5.2E-31 1.1E-35 284.1 19.7 214 467-699 17-268 (292)
240 cd06611 STKc_SLK_like Catalyti 100.0 3.8E-31 8.1E-36 283.1 18.2 214 468-700 11-262 (280)
241 cd07873 STKc_PCTAIRE1 Catalyti 100.0 5.5E-31 1.2E-35 285.3 19.7 218 467-699 11-285 (301)
242 cd06609 STKc_MST3_like Catalyt 100.0 5.2E-31 1.1E-35 281.0 19.2 211 468-699 7-250 (274)
243 cd07863 STKc_CDK4 Catalytic do 100.0 5E-31 1.1E-35 283.1 19.1 216 468-699 6-284 (288)
244 cd06636 STKc_MAP4K4_6 Catalyti 100.0 5.2E-31 1.1E-35 282.3 18.7 230 451-699 6-278 (282)
245 cd06651 STKc_MEKK3 Catalytic d 100.0 5.9E-31 1.3E-35 279.6 18.9 217 462-699 3-260 (266)
246 cd06613 STKc_MAP4K3_like Catal 100.0 9E-31 2E-35 276.5 20.2 217 468-699 9-259 (262)
247 cd05627 STKc_NDR2 Catalytic do 100.0 1.7E-31 3.6E-36 297.2 14.8 207 467-694 6-284 (360)
248 cd07878 STKc_p38beta_MAPK11 Ca 100.0 6.2E-31 1.3E-35 290.5 19.1 216 467-700 20-298 (343)
249 PTZ00284 protein kinase; Provi 100.0 3.8E-31 8.3E-36 304.6 18.0 230 454-699 122-437 (467)
250 cd06645 STKc_MAP4K3 Catalytic 100.0 5.3E-31 1.2E-35 279.7 17.7 212 468-699 15-264 (267)
251 cd06656 STKc_PAK3 Catalytic do 100.0 3.9E-31 8.4E-36 286.2 16.9 211 468-699 25-268 (297)
252 cd06652 STKc_MEKK2 Catalytic d 100.0 8.5E-31 1.9E-35 278.0 19.2 217 462-699 3-260 (265)
253 cd06658 STKc_PAK5 Catalytic do 100.0 3.8E-31 8.2E-36 285.7 16.7 212 468-700 28-272 (292)
254 cd07875 STKc_JNK1 Catalytic do 100.0 8.1E-31 1.8E-35 292.1 19.8 222 460-700 23-318 (364)
255 cd07847 STKc_CDKL1_4 Catalytic 100.0 9.9E-31 2.1E-35 280.1 19.7 217 468-699 7-282 (286)
256 KOG4717 Serine/threonine prote 100.0 6.2E-31 1.4E-35 282.0 17.8 215 464-698 20-268 (864)
257 KOG0574 STE20-like serine/thre 100.0 1.2E-32 2.6E-37 278.6 4.2 231 450-699 21-282 (502)
258 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1.1E-30 2.3E-35 281.0 19.6 227 462-700 2-266 (287)
259 cd07874 STKc_JNK3 Catalytic do 100.0 4.4E-31 9.6E-36 293.1 17.0 222 460-700 16-311 (355)
260 KOG0032 Ca2+/calmodulin-depend 100.0 1.1E-30 2.3E-35 289.0 19.9 217 461-699 34-292 (382)
261 cd06608 STKc_myosinIII_like Ca 100.0 9.5E-31 2.1E-35 277.9 18.7 224 459-699 4-271 (275)
262 cd05580 STKc_PKA Catalytic dom 100.0 1.2E-30 2.7E-35 281.0 19.7 205 467-692 6-241 (290)
263 cd06917 STKc_NAK1_like Catalyt 100.0 1E-30 2.2E-35 279.1 18.7 212 467-699 6-254 (277)
264 PRK13184 pknD serine/threonine 100.0 8.4E-31 1.8E-35 312.3 20.0 231 467-706 7-292 (932)
265 cd05633 STKc_GRK3 Catalytic do 100.0 9E-31 2E-35 280.8 18.3 213 469-699 1-254 (279)
266 cd06605 PKc_MAPKK Catalytic do 100.0 9.6E-31 2.1E-35 277.0 18.3 219 468-699 7-256 (265)
267 cd08220 STKc_Nek8 Catalytic do 100.0 1.6E-30 3.5E-35 273.6 19.8 215 467-699 5-252 (256)
268 cd06659 STKc_PAK6 Catalytic do 100.0 9.5E-31 2E-35 283.3 18.4 211 469-700 28-271 (297)
269 cd05577 STKc_GRK Catalytic dom 100.0 1E-30 2.2E-35 279.6 18.1 212 470-696 1-245 (277)
270 cd06629 STKc_MAPKKK_Bck1_like 100.0 1.3E-30 2.9E-35 277.4 18.6 212 468-699 7-268 (272)
271 cd07846 STKc_CDKL2_3 Catalytic 100.0 1.1E-30 2.5E-35 279.8 18.1 218 467-699 6-282 (286)
272 cd07844 STKc_PCTAIRE_like Cata 100.0 1.5E-30 3.3E-35 279.9 19.1 218 467-699 10-287 (291)
273 cd05609 STKc_MAST Catalytic do 100.0 1.6E-30 3.5E-35 282.3 19.3 215 468-702 7-272 (305)
274 cd07839 STKc_CDK5 Catalytic do 100.0 9E-31 2E-35 280.5 16.6 217 468-699 6-280 (284)
275 cd08528 STKc_Nek10 Catalytic d 100.0 2.6E-30 5.7E-35 274.7 20.0 220 468-702 6-268 (269)
276 KOG0577 Serine/threonine prote 100.0 1.5E-31 3.3E-36 290.8 10.4 212 467-698 31-276 (948)
277 cd08225 STKc_Nek5 Catalytic do 100.0 2.3E-30 4.9E-35 272.7 19.1 214 468-699 6-253 (257)
278 cd06623 PKc_MAPKK_plant_like C 100.0 3E-30 6.5E-35 272.6 20.0 216 468-700 7-256 (264)
279 cd06630 STKc_MEKK1 Catalytic d 100.0 2E-30 4.2E-35 275.1 18.6 215 468-699 6-263 (268)
280 PF00069 Pkinase: Protein kina 100.0 1.3E-30 2.8E-35 274.8 17.0 216 467-699 4-256 (260)
281 cd06617 PKc_MKK3_6 Catalytic d 100.0 2E-30 4.3E-35 277.5 18.6 222 462-699 2-260 (283)
282 cd05578 STKc_Yank1 Catalytic d 100.0 1.5E-30 3.4E-35 274.7 17.4 211 467-695 5-248 (258)
283 cd07841 STKc_CDK7 Catalytic do 100.0 3E-30 6.5E-35 278.6 19.9 216 468-699 6-281 (298)
284 cd05572 STKc_cGK_PKG Catalytic 100.0 3.1E-30 6.7E-35 273.1 19.1 206 470-693 1-240 (262)
285 cd05579 STKc_MAST_like Catalyt 100.0 2.4E-30 5.3E-35 273.0 17.8 211 470-701 1-255 (265)
286 PHA03207 serine/threonine kina 100.0 1.8E-30 3.9E-35 292.3 17.9 215 467-700 97-375 (392)
287 cd06610 STKc_OSR1_SPAK Catalyt 100.0 4.6E-30 9.9E-35 271.7 19.7 215 468-699 7-263 (267)
288 PHA03211 serine/threonine kina 100.0 2.4E-30 5.2E-35 295.4 18.6 219 462-700 170-455 (461)
289 KOG0584 Serine/threonine prote 100.0 3E-31 6.4E-36 293.7 10.7 219 463-699 41-295 (632)
290 cd07860 STKc_CDK2_3 Catalytic 100.0 3.8E-30 8.3E-35 275.7 19.1 218 468-699 6-280 (284)
291 PHA03209 serine/threonine kina 100.0 3.5E-30 7.5E-35 286.4 19.3 214 467-699 71-350 (357)
292 cd06607 STKc_TAO Catalytic dom 100.0 4E-30 8.6E-35 279.5 19.3 213 468-700 21-267 (307)
293 cd07832 STKc_CCRK Catalytic do 100.0 4.7E-30 1E-34 274.9 19.5 217 468-699 6-281 (286)
294 cd05606 STKc_beta_ARK Catalyti 100.0 3.8E-30 8.2E-35 275.7 18.7 213 469-699 1-254 (278)
295 KOG0579 Ste20-like serine/thre 100.0 2.6E-31 5.7E-36 290.0 9.7 220 461-699 31-288 (1187)
296 cd06614 STKc_PAK Catalytic dom 100.0 5.7E-30 1.2E-34 275.0 20.0 221 459-699 17-269 (286)
297 cd06626 STKc_MEKK4 Catalytic d 100.0 5.2E-30 1.1E-34 271.0 19.2 213 468-699 6-260 (264)
298 cd06648 STKc_PAK_II Catalytic 100.0 6.3E-30 1.4E-34 275.0 19.8 212 467-699 24-268 (285)
299 cd07870 STKc_PFTAIRE2 Catalyti 100.0 5.5E-30 1.2E-34 275.8 19.3 224 460-699 4-287 (291)
300 KOG0033 Ca2+/calmodulin-depend 100.0 1.1E-31 2.5E-36 265.3 5.2 211 468-699 17-266 (355)
301 KOG0612 Rho-associated, coiled 100.0 1.5E-30 3.2E-35 302.1 15.1 220 457-698 71-336 (1317)
302 cd05574 STKc_phototropin_like 100.0 1.1E-29 2.3E-34 277.0 20.7 213 468-699 7-288 (316)
303 cd07836 STKc_Pho85 Catalytic d 100.0 9.4E-30 2E-34 272.4 19.7 219 468-699 6-280 (284)
304 cd06653 STKc_MEKK3_like_1 Cata 100.0 9.5E-30 2.1E-34 270.0 19.3 212 467-699 7-260 (264)
305 cd07837 STKc_CdkB_plant Cataly 100.0 1.1E-29 2.3E-34 273.8 20.0 225 462-699 2-290 (295)
306 cd06635 STKc_TAO1 Catalytic do 100.0 1.2E-29 2.5E-34 277.3 20.3 218 467-704 30-281 (317)
307 cd07835 STKc_CDK1_like Catalyt 100.0 7.1E-30 1.5E-34 273.4 18.2 219 467-699 4-279 (283)
308 cd05611 STKc_Rim15_like Cataly 100.0 6.3E-30 1.4E-34 270.4 17.5 213 469-701 3-249 (260)
309 cd06647 STKc_PAK_I Catalytic d 100.0 6E-30 1.3E-34 276.4 17.3 218 461-700 19-269 (293)
310 KOG4645 MAPKKK (MAP kinase kin 100.0 4.6E-31 1E-35 309.7 9.1 212 469-699 1242-1493(1509)
311 cd05613 STKc_MSK1_N N-terminal 100.0 1E-29 2.2E-34 273.5 18.9 210 467-693 5-256 (290)
312 cd06657 STKc_PAK4 Catalytic do 100.0 1E-29 2.2E-34 274.7 18.5 211 468-699 26-269 (292)
313 cd07833 STKc_CDKL Catalytic do 100.0 9.7E-30 2.1E-34 272.7 17.9 217 468-699 7-284 (288)
314 KOG0604 MAP kinase-activated p 100.0 1.2E-30 2.6E-35 265.0 10.1 224 458-699 58-321 (400)
315 cd08530 STKc_CNK2-like Catalyt 100.0 1.5E-29 3.3E-34 265.9 19.0 216 468-699 6-252 (256)
316 KOG4250 TANK binding protein k 100.0 4.3E-30 9.4E-35 287.6 15.5 227 467-705 18-311 (732)
317 PHA03390 pk1 serine/threonine- 100.0 1.6E-29 3.4E-34 269.3 19.3 225 455-699 8-261 (267)
318 cd05122 PKc_STE Catalytic doma 100.0 2.7E-29 5.8E-34 262.3 20.5 213 468-699 6-250 (253)
319 cd06627 STKc_Cdc7_like Catalyt 100.0 2.1E-29 4.6E-34 264.3 19.8 212 468-699 6-250 (254)
320 cd08215 STKc_Nek Catalytic dom 100.0 2.6E-29 5.5E-34 263.8 20.3 216 468-699 6-254 (258)
321 cd06606 STKc_MAPKKK Catalytic 100.0 1.7E-29 3.6E-34 265.0 18.8 213 468-699 6-256 (260)
322 cd08216 PK_STRAD Pseudokinase 100.0 1.1E-29 2.5E-34 276.4 18.2 216 471-699 11-294 (314)
323 cd05583 STKc_MSK_N N-terminal 100.0 1.1E-29 2.4E-34 273.0 17.8 220 467-703 5-266 (288)
324 cd07831 STKc_MOK Catalytic dom 100.0 2.6E-29 5.6E-34 268.6 20.3 216 468-699 5-278 (282)
325 cd07843 STKc_CDC2L1 Catalytic 100.0 1.8E-29 3.9E-34 272.0 19.0 222 462-699 6-289 (293)
326 PLN00113 leucine-rich repeat r 100.0 2E-29 4.4E-34 315.4 22.3 236 450-707 682-954 (968)
327 cd06616 PKc_MKK4 Catalytic dom 100.0 1E-29 2.3E-34 273.0 16.8 219 468-700 10-267 (288)
328 cd07845 STKc_CDK10 Catalytic d 100.0 2.2E-29 4.7E-34 273.8 19.1 218 461-699 7-289 (309)
329 cd07850 STKc_JNK Catalytic dom 100.0 2.8E-29 6.1E-34 278.5 20.0 221 461-700 16-311 (353)
330 cd07864 STKc_CDK12 Catalytic d 100.0 2.6E-29 5.7E-34 271.7 19.2 223 459-699 5-298 (302)
331 PTZ00024 cyclin-dependent prot 100.0 1.9E-29 4.1E-34 277.6 18.4 220 462-699 9-312 (335)
332 cd08226 PK_STRAD_beta Pseudoki 100.0 2.4E-29 5.3E-34 276.1 19.0 217 472-706 10-316 (328)
333 cd07849 STKc_ERK1_2_like Catal 100.0 1.5E-29 3.2E-34 278.8 17.2 222 461-700 5-292 (336)
334 cd07855 STKc_ERK5 Catalytic do 100.0 2E-29 4.4E-34 277.4 17.5 223 461-700 5-294 (334)
335 cd07865 STKc_CDK9 Catalytic do 100.0 4.3E-29 9.4E-34 270.6 19.8 220 462-699 13-306 (310)
336 cd05123 STKc_AGC Catalytic dom 100.0 4.4E-29 9.5E-34 261.7 19.1 206 470-696 1-240 (250)
337 cd06633 STKc_TAO3 Catalytic do 100.0 4.7E-29 1E-33 272.1 19.9 213 468-700 27-273 (313)
338 KOG0983 Mitogen-activated prot 100.0 4E-30 8.7E-35 258.1 10.4 213 469-699 99-348 (391)
339 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.8E-29 3.9E-34 278.3 16.5 218 467-700 10-291 (337)
340 KOG0596 Dual specificity; seri 100.0 9.1E-30 2E-34 276.7 13.7 224 456-699 355-626 (677)
341 cd08222 STKc_Nek11 Catalytic d 100.0 4.4E-29 9.6E-34 263.9 18.8 215 468-699 6-256 (260)
342 KOG0607 MAP kinase-interacting 100.0 1.2E-29 2.6E-34 259.3 13.7 227 452-699 74-360 (463)
343 KOG0586 Serine/threonine prote 100.0 8.6E-30 1.9E-34 281.9 13.6 218 462-700 56-306 (596)
344 cd06634 STKc_TAO2 Catalytic do 100.0 4.8E-29 1E-33 271.3 19.4 213 468-700 21-267 (308)
345 PLN00009 cyclin-dependent kina 100.0 6.7E-29 1.4E-33 267.8 20.2 218 462-699 3-283 (294)
346 cd07879 STKc_p38delta_MAPK13 C 100.0 5.1E-29 1.1E-33 275.3 19.5 235 451-704 1-303 (342)
347 cd07842 STKc_CDK8_like Catalyt 100.0 4.8E-29 1E-33 271.2 19.0 221 468-699 6-312 (316)
348 cd07877 STKc_p38alpha_MAPK14 C 100.0 5.3E-29 1.1E-33 275.5 19.6 235 448-700 4-300 (345)
349 PHA02882 putative serine/threo 100.0 4.4E-29 9.6E-34 269.8 18.3 218 466-701 16-293 (294)
350 cd07840 STKc_CDK9_like Catalyt 100.0 5.8E-29 1.3E-33 266.1 18.8 216 467-699 4-283 (287)
351 cd06618 PKc_MKK7 Catalytic dom 100.0 5.5E-29 1.2E-33 269.0 18.5 215 468-700 21-273 (296)
352 KOG0667 Dual-specificity tyros 100.0 4.3E-29 9.4E-34 279.1 17.2 167 464-642 188-389 (586)
353 cd05581 STKc_PDK1 Catalytic do 100.0 5.7E-29 1.2E-33 265.2 17.5 210 468-698 7-275 (280)
354 cd07852 STKc_MAPK15 Catalytic 100.0 7.1E-29 1.5E-33 273.3 18.6 222 461-700 7-295 (337)
355 cd07830 STKc_MAK_like Catalyti 100.0 7E-29 1.5E-33 265.6 17.7 218 468-699 5-279 (283)
356 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 7.1E-29 1.5E-33 272.6 18.1 227 455-699 4-287 (328)
357 KOG3653 Transforming growth fa 100.0 9E-29 2E-33 265.3 17.1 227 468-708 216-507 (534)
358 cd05118 STKc_CMGC Catalytic do 100.0 1.5E-28 3.3E-33 262.5 18.8 217 468-699 5-279 (283)
359 KOG1006 Mitogen-activated prot 100.0 2E-30 4.4E-35 259.5 3.8 231 447-699 57-326 (361)
360 cd07838 STKc_CDK4_6_like Catal 100.0 2.5E-28 5.5E-33 261.4 20.0 213 468-699 5-283 (287)
361 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.5E-28 3.3E-33 271.6 18.9 222 460-699 14-297 (343)
362 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.2E-28 2.6E-33 272.3 17.8 220 462-699 6-299 (342)
363 KOG1035 eIF-2alpha kinase GCN2 100.0 3.4E-29 7.4E-34 293.0 14.0 218 459-699 477-870 (1351)
364 KOG0200 Fibroblast/platelet-de 100.0 1.4E-28 3E-33 290.1 19.2 228 469-705 303-580 (609)
365 KOG0986 G protein-coupled rece 100.0 1.9E-29 4.1E-34 268.4 10.2 230 451-695 174-436 (591)
366 KOG0690 Serine/threonine prote 100.0 2.1E-29 4.5E-34 257.7 9.8 208 465-693 171-412 (516)
367 KOG2052 Activin A type IB rece 100.0 7.6E-29 1.6E-33 264.0 14.2 225 467-706 216-505 (513)
368 cd07851 STKc_p38 Catalytic dom 100.0 1.6E-28 3.4E-33 271.5 17.2 223 459-699 13-297 (343)
369 cd07834 STKc_MAPK Catalytic do 100.0 2.7E-28 5.8E-33 267.7 18.7 223 467-705 5-296 (330)
370 PHA03210 serine/threonine kina 100.0 7.3E-29 1.6E-33 287.6 14.1 227 461-699 148-453 (501)
371 cd07829 STKc_CDK_like Catalyti 100.0 3.7E-28 7.9E-33 259.5 18.4 217 468-699 5-278 (282)
372 cd05576 STKc_RPK118_like Catal 100.0 1.6E-28 3.5E-33 256.8 15.1 196 473-696 4-225 (237)
373 cd07866 STKc_BUR1 Catalytic do 100.0 4E-28 8.6E-33 263.2 18.5 222 460-699 7-307 (311)
374 cd07857 STKc_MPK1 Catalytic do 100.0 4.7E-28 1E-32 266.4 18.2 216 468-699 6-291 (332)
375 KOG0608 Warts/lats-like serine 100.0 4E-28 8.6E-33 265.9 17.1 210 465-693 632-918 (1034)
376 KOG0666 Cyclin C-dependent kin 100.0 1.6E-28 3.4E-33 250.5 11.4 223 467-700 29-337 (438)
377 smart00220 S_TKc Serine/Threon 99.9 5E-27 1.1E-31 243.1 18.7 206 474-699 1-240 (244)
378 KOG0603 Ribosomal protein S6 k 99.9 7.7E-28 1.7E-32 267.8 12.7 213 462-699 319-562 (612)
379 KOG0696 Serine/threonine prote 99.9 7.1E-28 1.5E-32 252.9 11.0 206 467-693 354-594 (683)
380 cd05610 STKc_MASTL Catalytic d 99.9 1.4E-26 3.1E-31 276.8 19.4 138 462-613 5-151 (669)
381 KOG0669 Cyclin T-dependent kin 99.9 6.4E-28 1.4E-32 239.6 4.5 219 466-701 21-316 (376)
382 KOG0587 Traf2- and Nck-interac 99.9 1.5E-26 3.3E-31 263.6 15.8 215 467-699 24-281 (953)
383 KOG0984 Mitogen-activated prot 99.9 6.4E-27 1.4E-31 226.8 10.2 186 469-667 53-274 (282)
384 KOG4236 Serine/threonine prote 99.9 4.1E-27 8.8E-32 253.4 9.6 210 468-698 570-817 (888)
385 KOG0662 Cyclin-dependent kinas 99.9 1.6E-26 3.4E-31 219.2 12.3 163 468-643 8-205 (292)
386 KOG1024 Receptor-like protein 99.9 2E-26 4.3E-31 241.2 13.5 227 468-706 290-557 (563)
387 KOG0614 cGMP-dependent protein 99.9 2.8E-27 6E-32 254.3 6.1 205 469-693 427-665 (732)
388 PLN03225 Serine/threonine-prot 99.9 3E-26 6.5E-31 267.9 15.3 233 459-699 130-449 (566)
389 PLN03224 probable serine/threo 99.9 2.7E-25 5.8E-30 254.1 19.2 236 459-699 143-499 (507)
390 KOG0695 Serine/threonine prote 99.9 1.8E-25 3.9E-30 229.4 10.0 217 461-693 250-503 (593)
391 KOG1027 Serine/threonine prote 99.9 5.5E-26 1.2E-30 257.9 6.5 228 461-710 508-786 (903)
392 KOG0668 Casein kinase II, alph 99.9 3.2E-25 7E-30 217.8 10.8 213 468-699 44-321 (338)
393 KOG1345 Serine/threonine kinas 99.9 9.8E-25 2.1E-29 219.3 11.9 224 464-704 26-288 (378)
394 cd00180 PKc Catalytic domain o 99.9 8E-24 1.7E-28 213.2 18.4 180 470-700 1-214 (215)
395 KOG0664 Nemo-like MAPK-related 99.9 1E-25 2.2E-30 225.9 3.8 161 468-642 59-259 (449)
396 KOG0671 LAMMER dual specificit 99.9 7.6E-25 1.6E-29 230.2 9.1 219 467-699 94-405 (415)
397 KOG0576 Mitogen-activated prot 99.9 7E-24 1.5E-28 235.1 5.7 220 461-699 15-270 (829)
398 smart00221 STYKc Protein kinas 99.9 3E-22 6.6E-27 205.5 17.5 163 468-643 5-202 (225)
399 KOG0665 Jun-N-terminal kinase 99.9 5.6E-23 1.2E-27 211.6 9.8 213 468-699 23-309 (369)
400 KOG0670 U4/U6-associated splic 99.9 4.8E-23 1E-27 222.4 9.4 182 447-642 420-636 (752)
401 KOG1152 Signal transduction se 99.9 6.9E-23 1.5E-27 223.9 8.7 166 464-642 563-770 (772)
402 PLN00181 protein SPA1-RELATED; 99.8 1.1E-21 2.3E-26 240.2 9.4 167 511-699 28-264 (793)
403 KOG1290 Serine/threonine prote 99.8 1.5E-20 3.3E-25 202.6 14.1 122 467-599 83-221 (590)
404 KOG1167 Serine/threonine prote 99.8 5.4E-21 1.2E-25 204.0 10.0 214 468-699 42-380 (418)
405 KOG0195 Integrin-linked kinase 99.8 4.7E-21 1E-25 192.5 6.3 219 472-705 200-447 (448)
406 cd01989 STK_N The N-terminal d 99.8 1.1E-19 2.3E-24 175.5 15.4 145 7-164 1-146 (146)
407 smart00750 KIND kinase non-cat 99.8 8.8E-20 1.9E-24 181.4 13.9 143 538-706 1-171 (176)
408 cd05147 RIO1_euk RIO kinase fa 99.8 2.6E-20 5.7E-25 188.2 9.5 134 468-615 3-166 (190)
409 PRK09188 serine/threonine prot 99.8 1.5E-19 3.2E-24 198.8 14.0 135 459-615 16-161 (365)
410 PRK10359 lipopolysaccharide co 99.8 1.3E-19 2.8E-24 186.1 10.2 153 461-635 30-216 (232)
411 cd05145 RIO1_like RIO kinase f 99.8 3.4E-19 7.4E-24 180.2 12.6 134 468-615 3-166 (190)
412 KOG1163 Casein kinase (serine/ 99.8 1.4E-18 3E-23 172.6 13.9 223 467-706 20-286 (341)
413 KOG1164 Casein kinase (serine/ 99.8 8.7E-18 1.9E-22 184.2 19.1 225 467-707 23-300 (322)
414 PRK12274 serine/threonine prot 99.8 5.1E-18 1.1E-22 170.8 13.0 152 468-641 8-207 (218)
415 KOG1165 Casein kinase (serine/ 99.7 3.8E-17 8.2E-22 169.2 15.4 224 468-708 34-303 (449)
416 PRK14879 serine/threonine prot 99.7 4.6E-17 1E-21 167.0 15.6 130 468-615 2-143 (211)
417 COG0515 SPS1 Serine/threonine 99.7 1.3E-16 2.8E-21 170.6 19.5 218 468-700 6-275 (384)
418 PRK10345 hypothetical protein; 99.7 2E-17 4.4E-22 169.0 11.3 130 467-613 7-156 (210)
419 KOG1023 Natriuretic peptide re 99.7 4.7E-17 1E-21 182.3 12.2 185 509-707 1-227 (484)
420 PF04564 U-box: U-box domain; 99.7 1.1E-17 2.3E-22 141.2 5.2 73 733-805 1-73 (73)
421 TIGR03724 arch_bud32 Kae1-asso 99.7 9.7E-17 2.1E-21 163.1 12.8 126 469-615 1-138 (199)
422 smart00090 RIO RIO-like kinase 99.7 1.3E-16 2.8E-21 166.8 10.5 136 464-615 30-197 (237)
423 KOG0590 Checkpoint kinase and 99.7 1.8E-17 3.9E-22 193.9 3.8 216 466-699 322-584 (601)
424 PF14531 Kinase-like: Kinase-l 99.7 3E-16 6.5E-21 166.0 11.5 205 468-691 18-288 (288)
425 KOG1240 Protein kinase contain 99.7 7.6E-17 1.6E-21 188.1 6.9 208 469-700 30-291 (1431)
426 cd05144 RIO2_C RIO kinase fami 99.6 1.1E-15 2.5E-20 155.4 12.2 131 464-615 17-174 (198)
427 PRK09605 bifunctional UGMP fam 99.6 2.2E-15 4.7E-20 176.5 15.7 128 467-616 338-477 (535)
428 KOG0603 Ribosomal protein S6 k 99.6 1.3E-16 2.9E-21 178.6 3.2 200 470-694 2-232 (612)
429 KOG4158 BRPK/PTEN-induced prot 99.6 2.5E-15 5.5E-20 158.8 9.9 168 513-701 274-511 (598)
430 KOG1166 Mitotic checkpoint ser 99.6 9.5E-15 2.1E-19 174.4 15.0 159 466-638 702-900 (974)
431 cd05120 APH_ChoK_like Aminogly 99.6 3.2E-14 6.9E-19 136.2 13.3 145 468-634 4-152 (155)
432 PRK01723 3-deoxy-D-manno-octul 99.6 1.7E-14 3.8E-19 151.0 11.8 136 463-616 32-192 (239)
433 cd05119 RIO RIO kinase family, 99.5 2.1E-14 4.6E-19 144.3 9.8 132 468-615 3-163 (187)
434 PRK15456 universal stress prot 99.5 9.6E-14 2.1E-18 133.5 13.0 139 6-162 3-142 (142)
435 PRK15005 universal stress prot 99.5 1.7E-13 3.6E-18 131.9 13.6 141 6-162 3-144 (144)
436 cd01987 USP_OKCHK USP domain i 99.5 1.2E-13 2.6E-18 129.4 9.1 123 7-161 1-123 (124)
437 KOG0606 Microtubule-associated 99.5 5.1E-14 1.1E-18 164.9 7.2 178 461-693 83-305 (1205)
438 PRK09982 universal stress prot 99.4 1E-12 2.2E-17 126.5 10.8 136 6-163 4-139 (142)
439 PRK15118 universal stress glob 99.4 7.3E-13 1.6E-17 127.6 8.9 136 6-163 4-139 (144)
440 cd01988 Na_H_Antiporter_C The 99.4 3E-12 6.6E-17 120.7 12.7 132 7-162 1-132 (132)
441 PF00582 Usp: Universal stress 99.4 2E-12 4.3E-17 122.0 9.3 138 6-162 3-140 (140)
442 TIGR01982 UbiB 2-polyprenylphe 99.3 8.9E-12 1.9E-16 141.8 15.2 133 468-615 123-306 (437)
443 cd05151 ChoK Choline Kinase (C 99.3 4.2E-12 9.1E-17 125.3 10.3 141 469-633 5-149 (170)
444 KOG1033 eIF-2alpha kinase PEK/ 99.3 5.7E-13 1.2E-17 147.0 3.9 143 527-695 330-507 (516)
445 PRK10116 universal stress prot 99.2 7.9E-11 1.7E-15 113.0 11.2 135 6-162 4-138 (142)
446 PRK04750 ubiB putative ubiquin 99.2 4.3E-10 9.3E-15 129.7 17.5 157 462-637 121-332 (537)
447 PRK11175 universal stress prot 99.2 1.4E-10 2.9E-15 126.3 12.6 144 6-164 4-147 (305)
448 KOG1266 Protein kinase [Signal 99.1 5.1E-11 1.1E-15 124.1 7.1 177 505-699 117-330 (458)
449 smart00504 Ubox Modified RING 99.1 4.3E-11 9.3E-16 98.2 4.5 63 736-799 1-63 (63)
450 cd00293 USP_Like Usp: Universa 99.1 5.6E-10 1.2E-14 103.9 12.2 130 7-161 1-130 (130)
451 COG3642 Mn2+-dependent serine/ 99.1 5.5E-10 1.2E-14 109.1 12.1 136 469-625 3-152 (204)
452 KOG3741 Poly(A) ribonuclease s 99.1 1E-09 2.2E-14 121.0 14.7 207 476-700 290-521 (655)
453 cd05154 ACAD10_11_like Acyl-Co 99.1 6.3E-10 1.4E-14 114.4 12.1 137 468-615 4-206 (223)
454 KOG3087 Serine/threonine prote 99.1 4.3E-10 9.4E-15 109.1 9.7 150 466-626 11-178 (229)
455 PRK11175 universal stress prot 99.1 6.7E-10 1.4E-14 120.8 12.3 142 5-163 152-300 (305)
456 cd05146 RIO3_euk RIO kinase fa 99.1 9.5E-10 2.1E-14 110.9 11.5 131 469-615 4-173 (197)
457 KOG0590 Checkpoint kinase and 99.0 1.3E-11 2.9E-16 144.8 -2.7 212 470-698 28-284 (601)
458 KOG1243 Protein kinase [Genera 99.0 4.5E-09 9.7E-14 119.6 13.8 137 484-637 36-199 (690)
459 KOG0601 Cyclin-dependent kinas 98.9 6.5E-10 1.4E-14 125.3 3.9 222 458-704 262-518 (524)
460 COG0589 UspA Universal stress 98.8 4.3E-08 9.4E-13 94.4 13.1 145 5-163 5-152 (154)
461 PRK15123 lipopolysaccharide co 98.8 4.8E-08 1E-12 103.8 13.3 147 476-633 36-213 (268)
462 KOG0601 Cyclin-dependent kinas 98.8 5.3E-09 1.1E-13 118.1 6.2 214 470-705 122-383 (524)
463 KOG4642 Chaperone-dependent E3 98.7 1.6E-08 3.4E-13 101.4 5.7 78 730-807 205-282 (284)
464 KOG0606 Microtubule-associated 98.7 7.9E-09 1.7E-13 122.2 2.2 206 469-695 811-1084(1205)
465 PF01163 RIO1: RIO1 family; I 98.7 7E-08 1.5E-12 97.0 8.6 122 477-616 1-156 (188)
466 PRK09902 hypothetical protein; 98.5 1.2E-06 2.6E-11 88.8 12.5 133 471-615 27-179 (216)
467 COG4248 Uncharacterized protei 98.5 4.1E-06 8.9E-11 90.8 16.5 234 468-710 17-306 (637)
468 PF06293 Kdo: Lipopolysacchari 98.4 7E-07 1.5E-11 91.5 9.4 121 483-616 30-171 (206)
469 COG0661 AarF Predicted unusual 98.4 2.7E-06 5.9E-11 97.9 14.2 133 469-615 132-314 (517)
470 PRK12652 putative monovalent c 98.4 1.3E-06 2.7E-11 96.1 11.0 103 6-130 6-123 (357)
471 PF12260 PIP49_C: Protein-kina 98.2 3.4E-06 7.4E-11 85.0 9.0 165 503-683 7-187 (188)
472 TIGR02172 Fb_sc_TIGR02172 Fibr 98.2 1.1E-05 2.3E-10 84.0 12.2 144 468-615 7-182 (226)
473 KOG1235 Predicted unusual prot 98.2 8E-06 1.7E-10 93.7 11.3 133 469-615 168-354 (538)
474 COG0478 RIO-like serine/threon 98.1 1E-05 2.2E-10 84.1 9.1 126 468-613 97-249 (304)
475 cd05150 APH Aminoglycoside 3'- 98.0 3.4E-05 7.3E-10 81.1 11.5 153 473-634 10-207 (244)
476 PF01636 APH: Phosphotransfera 98.0 1.8E-05 3.9E-10 81.7 9.3 144 469-615 4-197 (239)
477 KOG2137 Protein kinase [Signal 98.0 1.3E-06 2.8E-11 100.3 0.1 123 569-698 105-263 (700)
478 PF06176 WaaY: Lipopolysacchar 98.0 7.2E-05 1.6E-09 76.3 11.8 126 468-615 37-183 (229)
479 COG2112 Predicted Ser/Thr prot 97.9 5.2E-05 1.1E-09 74.1 9.3 126 468-615 28-155 (201)
480 PRK10490 sensor protein KdpD; 97.9 5E-05 1.1E-09 94.5 11.2 125 5-163 250-374 (895)
481 cd05155 APH_ChoK_like_1 Unchar 97.9 7.1E-05 1.5E-09 78.3 10.0 148 472-624 8-201 (235)
482 PLN02876 acyl-CoA dehydrogenas 97.8 0.00015 3.3E-09 89.6 13.8 148 468-615 44-257 (822)
483 PRK10593 hypothetical protein; 97.8 0.00023 4.9E-09 77.3 12.8 72 469-540 21-100 (297)
484 PRK05231 homoserine kinase; Pr 97.8 0.0022 4.8E-08 70.2 20.8 162 470-637 30-234 (319)
485 PRK09550 mtnK methylthioribose 97.7 0.00044 9.5E-09 77.6 14.7 71 469-539 33-117 (401)
486 cd05157 ETNK_euk Ethanolamine 97.7 0.00028 6E-09 73.6 11.8 159 470-635 6-216 (235)
487 COG1718 RIO1 Serine/threonine 97.7 0.00015 3.3E-09 74.8 9.0 132 469-615 55-215 (268)
488 TIGR00938 thrB_alt homoserine 97.7 0.00076 1.7E-08 73.5 15.0 164 467-635 27-232 (307)
489 TIGR02721 ycfN_thiK thiamine k 97.6 0.00022 4.7E-09 75.6 9.0 152 472-634 6-189 (256)
490 COG2205 KdpD Osmosensitive K+ 97.6 0.00024 5.2E-09 83.3 9.8 130 5-166 248-377 (890)
491 cd05153 HomoserineK_II Homoser 97.5 0.0012 2.7E-08 71.3 13.5 162 468-635 20-220 (296)
492 cd05156 ChoK_euk Choline Kinas 97.3 0.0064 1.4E-07 66.0 16.1 159 471-636 7-229 (302)
493 KOG2042 Ubiquitin fusion degra 97.3 0.0003 6.6E-09 84.2 5.9 75 730-805 864-939 (943)
494 PLN02756 S-methyl-5-thioribose 97.3 0.0064 1.4E-07 68.1 16.0 77 468-544 38-128 (418)
495 PF10707 YrbL-PhoP_reg: PhoP r 97.0 0.0076 1.6E-07 61.3 11.6 123 468-609 7-165 (199)
496 COG5113 UFD2 Ubiquitin fusion 96.9 0.0033 7.3E-08 71.0 9.5 78 729-807 847-925 (929)
497 PRK06148 hypothetical protein; 96.9 0.033 7E-07 70.4 19.5 163 468-636 31-252 (1013)
498 TIGR01767 MTRK 5-methylthiorib 96.9 0.012 2.5E-07 65.0 13.2 75 470-544 3-92 (370)
499 cd05152 MPH2' Macrolide 2'-Pho 96.9 0.0035 7.5E-08 67.3 9.1 69 470-540 19-91 (276)
500 PF13095 FTA2: Kinetochore Sim 96.9 0.0093 2E-07 60.4 11.4 131 446-613 27-206 (207)
No 1
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-46 Score=409.07 Aligned_cols=249 Identities=37% Similarity=0.647 Sum_probs=211.6
Q ss_pred cccccCHHHHHHhhccccccccccccCCceEEEEEEEC-CeEEEEEEccCCCC--HHHHHHHHHHHhccCCCCccceeec
Q 003594 447 AFREYAAEDIRLATEDFSERFRLKCAGDWTNVYRGRLN-HASVAIKTLNNGLS--EEDFQAKVSFLTAVRHPHLVAVMGC 523 (808)
Q Consensus 447 ~~~~~~~~ei~~at~~f~~~~~i~g~G~~g~Vy~~~~~-~~~vAiK~l~~~~~--~~~~~~Ei~il~~l~HpnIv~l~g~ 523 (808)
..+.|++.||..||+||+..+.+ |+|+||.||+|.+. |+.||||++..... ..+|.+|+.+|++++|||+|+|+||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~i-g~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGy 139 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLI-GEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGY 139 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcce-ecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEE
Confidence 67889999999999999998655 57889999999995 58999999984443 5679999999999999999999999
Q ss_pred ccc--c-eEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccC
Q 003594 524 CSE--L-KCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLD 600 (808)
Q Consensus 524 ~~~--~-~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld 600 (808)
|.+ . .+||||||++|||.++|+.. ... +++|.+|++|+.++|+||+|||...+++||||||||+|||||
T Consensus 140 C~e~~~~~~LVYEym~nGsL~d~L~~~-------~~~-~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD 211 (361)
T KOG1187|consen 140 CLEGGEHRLLVYEYMPNGSLEDHLHGK-------KGE-PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLD 211 (361)
T ss_pred EecCCceEEEEEEccCCCCHHHHhCCC-------CCC-CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeEC
Confidence 975 3 89999999999999999754 122 899999999999999999999998878999999999999999
Q ss_pred CCccEEEEeCCCccc--------------------------CCCCcchhhHhHHHHHHHHHcCCCCchh---------hH
Q 003594 601 RNLVAKISGLGLNIC--------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGL---------VE 645 (808)
Q Consensus 601 ~~~~~kl~DfGla~~--------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~---------~~ 645 (808)
.++++||+|||+|+. +..+.|+|||||||+|+||+||++|.+. ..
T Consensus 212 ~~~~aKlsDFGLa~~~~~~~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~ 291 (361)
T KOG1187|consen 212 EDFNAKLSDFGLAKLGPEGDTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVE 291 (361)
T ss_pred CCCCEEccCccCcccCCccccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHH
Confidence 999999999998643 2356899999999999999999987652 23
Q ss_pred HH-hhhcHHHHHHHhccCC--CCCCh-hhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHHHH
Q 003594 646 KA-MALDQTTLMQVLDGNA--GIWPL-DLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVRK 706 (808)
Q Consensus 646 ~~-~~~~~~~~~~~ld~~~--~~~p~-~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~~ 706 (808)
|. .......+.+++|+.. ..++. .....+..++.+|++.+ |..||+|.+|++.|+.+..
T Consensus 292 w~~~~~~~~~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~--~~~RP~m~~Vv~~L~~~~~ 354 (361)
T KOG1187|consen 292 WAKPLLEEGKLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPD--PKERPTMSQVVKELEGILS 354 (361)
T ss_pred HHHHHHHCcchhheeCCCccCCCCChHHHHHHHHHHHHHHcCcC--CCcCcCHHHHHHHHHhhcc
Confidence 32 1223336788888864 45554 57778999999999999 8999999999999966543
No 2
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-40 Score=364.98 Aligned_cols=223 Identities=29% Similarity=0.501 Sum_probs=193.7
Q ss_pred cccCCceEEEEEEECCeE-EEEEEccCC-CC---HHHHHHHHHHHhccCCCCccceeeccccc---eEEEEeecCCCCHH
Q 003594 470 KCAGDWTNVYRGRLNHAS-VAIKTLNNG-LS---EEDFQAKVSFLTAVRHPHLVAVMGCCSEL---KCIVFEYMPNGNLR 541 (808)
Q Consensus 470 ~g~G~~g~Vy~~~~~~~~-vAiK~l~~~-~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~~---~~lV~Ey~~~gsL~ 541 (808)
+|.|+||+||+|.+.|+. ||||++... .+ .+.|.+|+.+|.+++|||||+++|+|.+. .+|||||+++|+|.
T Consensus 49 iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~GsL~ 128 (362)
T KOG0192|consen 49 LGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGGSLS 128 (362)
T ss_pred cccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCCcHH
Confidence 689999999999999988 999999832 22 45899999999999999999999999773 68999999999999
Q ss_pred HHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCc-cEEEEeCCCccc-----
Q 003594 542 DKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNL-VAKISGLGLNIC----- 615 (808)
Q Consensus 542 ~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~-~~kl~DfGla~~----- 615 (808)
++|+.. ....+++..+++|+.|||.||.|||+.+| ||||||||+|||++.++ ++||+|||+++.
T Consensus 129 ~~l~~~--------~~~~l~~~~~l~~aldiArGm~YLH~~~~--iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~ 198 (362)
T KOG0192|consen 129 VLLHKK--------RKRKLPLKVRLRIALDIARGMEYLHSEGP--IIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK 198 (362)
T ss_pred HHHhhc--------ccCCCCHHHHHHHHHHHHHHHHHHhcCCC--eeecccChhhEEEcCCCCEEEECCCccceeecccc
Confidence 999642 35789999999999999999999999653 99999999999999998 999999999853
Q ss_pred -------------------C---CCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHH-hccCCCCCChhhHH
Q 003594 616 -------------------D---QLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQV-LDGNAGIWPLDLAE 672 (808)
Q Consensus 616 -------------------~---~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~-ld~~~~~~p~~~~~ 672 (808)
+ .|+.|+|||||||+||||+||+.||..... ......+ ....++..|..+++
T Consensus 199 ~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~-----~~~~~~v~~~~~Rp~~p~~~~~ 273 (362)
T KOG0192|consen 199 TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP-----VQVASAVVVGGLRPPIPKECPP 273 (362)
T ss_pred ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHhcCCCCCCCccCCH
Confidence 2 389999999999999999999999976432 1222233 34567778888999
Q ss_pred HHHHHHHHhhccCCCcCccccHHhhHHHHHHHHHhcc
Q 003594 673 ELAGIALKCLSADQDANRDLRIAGVMKELDEVRKKAD 709 (808)
Q Consensus 673 ~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~~~~~ 709 (808)
.+..|+.+||..| |..||++.+++..|+.+.....
T Consensus 274 ~l~~l~~~CW~~d--p~~RP~f~ei~~~l~~~~~~~~ 308 (362)
T KOG0192|consen 274 HLSSLMERCWLVD--PSRRPSFLEIVSRLESIMSHIS 308 (362)
T ss_pred HHHHHHHHhCCCC--CCcCCCHHHHHHHHHHHHHhhc
Confidence 9999999999999 9999999999999999986543
No 3
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-41 Score=351.39 Aligned_cols=220 Identities=24% Similarity=0.310 Sum_probs=190.6
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccC---CCCHHHHHHHHHHHhccCCCCccceeecccc--c-eEEEEeecCCC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNN---GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--L-KCIVFEYMPNG 538 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~---~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~-~~lV~Ey~~~g 538 (808)
...+|.|..|+||++.+ +++.+|+|++.- .....++.+|++++...+||+||.+||+|.. . .+|+||||++|
T Consensus 84 ~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~mEYMDgG 163 (364)
T KOG0581|consen 84 LGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICMEYMDGG 163 (364)
T ss_pred hhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeehhhcCCC
Confidence 45678999999999999 589999999962 3335789999999999999999999999955 3 89999999999
Q ss_pred CHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc---
Q 003594 539 NLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC--- 615 (808)
Q Consensus 539 sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~--- 615 (808)
||.+++. ..+.+++...-+|+.+|++||.|||.. ++||||||||+|||++..|.+||||||.++.
T Consensus 164 SLd~~~k----------~~g~i~E~~L~~ia~~VL~GL~YLh~~--~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvn 231 (364)
T KOG0581|consen 164 SLDDILK----------RVGRIPEPVLGKIARAVLRGLSYLHEE--RKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVN 231 (364)
T ss_pred CHHHHHh----------hcCCCCHHHHHHHHHHHHHHHHHHhhc--cCeeeccCCHHHeeeccCCCEEeccccccHHhhh
Confidence 9999994 446799999999999999999999963 5699999999999999999999999999853
Q ss_pred --------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChh-hHHHH
Q 003594 616 --------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLD-LAEEL 674 (808)
Q Consensus 616 --------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~-~~~~l 674 (808)
..|+.++||||||+.++||.+|+.||..........-..+..+++...+..|.. +++++
T Consensus 232 S~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~ppP~lP~~~fS~ef 311 (364)
T KOG0581|consen 232 SIANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDEPPPRLPEGEFSPEF 311 (364)
T ss_pred hhcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcCCCCCCCcccCCHHH
Confidence 468999999999999999999999986542211133456677888777888886 99999
Q ss_pred HHHHHHhhccCCCcCccccHHhhHHH
Q 003594 675 AGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 675 ~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
..++..||++| |+.||++.|++..
T Consensus 312 ~~FV~~CL~Kd--p~~R~s~~qLl~H 335 (364)
T KOG0581|consen 312 RSFVSCCLRKD--PSERPSAKQLLQH 335 (364)
T ss_pred HHHHHHHhcCC--cccCCCHHHHhcC
Confidence 99999999999 9999999998864
No 4
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-40 Score=362.75 Aligned_cols=221 Identities=29% Similarity=0.454 Sum_probs=197.0
Q ss_pred cccccCCceEEEEEEECCe-EEEEEEccC-CCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCHHHH
Q 003594 468 RLKCAGDWTNVYRGRLNHA-SVAIKTLNN-GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNLRDK 543 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~~~~-~vAiK~l~~-~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL~~~ 543 (808)
+-+|.|-||.||.|.+++. .||+|.++. ....+.|.+|+.+|.+|+|+|||+|+|+|.. .+|||||||+.|+|.++
T Consensus 212 ~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsLl~y 291 (468)
T KOG0197|consen 212 RELGSGQFGEVWLGKWNGSTKVAVKTIKEGSMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSLLDY 291 (468)
T ss_pred HHhcCCccceEEEEEEcCCCcccceEEeccccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcHHHH
Confidence 3468999999999999875 999999994 5667899999999999999999999999976 58999999999999999
Q ss_pred HhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--------
Q 003594 544 LFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-------- 615 (808)
Q Consensus 544 l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-------- 615 (808)
|... ....+...+.+.++.|||.|++||++ +++|||||-..|||+++++.+||+|||+|+.
T Consensus 292 Lr~~--------~~~~l~~~~Ll~~a~qIaeGM~YLes---~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~ 360 (468)
T KOG0197|consen 292 LRTR--------EGGLLNLPQLLDFAAQIAEGMAYLES---KNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTA 360 (468)
T ss_pred hhhc--------CCCccchHHHHHHHHHHHHHHHHHHh---CCccchhhhhhheeeccCceEEEcccccccccCCCceee
Confidence 9642 45678899999999999999999999 6699999999999999999999999999975
Q ss_pred ------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHHHHH
Q 003594 616 ------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAG 676 (808)
Q Consensus 616 ------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~ 676 (808)
..++.|||||||||+||||+| |+.||... .....+..+-.+.+.+.|..||+.+.+
T Consensus 361 ~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~m-----sn~ev~~~le~GyRlp~P~~CP~~vY~ 435 (468)
T KOG0197|consen 361 SEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGM-----SNEEVLELLERGYRLPRPEGCPDEVYE 435 (468)
T ss_pred cCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCC-----CHHHHHHHHhccCcCCCCCCCCHHHHH
Confidence 357899999999999999999 89888753 334455556667889999999999999
Q ss_pred HHHHhhccCCCcCccccHHhhHHHHHHHHH
Q 003594 677 IALKCLSADQDANRDLRIAGVMKELDEVRK 706 (808)
Q Consensus 677 Li~~Cl~~dp~p~~Rps~~evl~~L~~l~~ 706 (808)
|+..||..+ |++|||+..+...|+.+..
T Consensus 436 lM~~CW~~~--P~~RPtF~~L~~~l~~~~~ 463 (468)
T KOG0197|consen 436 LMKSCWHED--PEDRPTFETLREVLEDFFT 463 (468)
T ss_pred HHHHHhhCC--cccCCCHHHHHHHHHHhhh
Confidence 999999999 9999999999988888764
No 5
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.8e-39 Score=356.65 Aligned_cols=218 Identities=22% Similarity=0.319 Sum_probs=190.7
Q ss_pred cccccccccccCCceEEEEEEE--CCeEEEEEEcc-----CCCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEE
Q 003594 462 DFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLN-----NGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVF 532 (808)
Q Consensus 462 ~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~-----~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~ 532 (808)
.++...+++|+|||+.||.+++ +|..||+|++. .....+.+.+||+|.+.|.|||||+++++|++ +.|||.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 4567778899999999999998 68999999997 34456789999999999999999999999988 899999
Q ss_pred eecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCC
Q 003594 533 EYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 612 (808)
Q Consensus 533 Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGl 612 (808)
|+|++|+|..++ ....++++..+..|+.||+.||.|||+ .+|||||||..|+||+++.++||+||||
T Consensus 98 ELC~~~sL~el~----------Krrk~ltEpEary~l~QIv~GlkYLH~---~~IiHRDLKLGNlfL~~~~~VKIgDFGL 164 (592)
T KOG0575|consen 98 ELCHRGSLMELL----------KRRKPLTEPEARYFLRQIVEGLKYLHS---LGIIHRDLKLGNLFLNENMNVKIGDFGL 164 (592)
T ss_pred EecCCccHHHHH----------HhcCCCCcHHHHHHHHHHHHHHHHHHh---cCceecccchhheeecCcCcEEecccce
Confidence 999999999999 456889999999999999999999999 5699999999999999999999999999
Q ss_pred ccc-------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCC
Q 003594 613 NIC-------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWP 667 (808)
Q Consensus 613 a~~-------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p 667 (808)
|.. ..++..+||||+|||||.||+|+|||.... -++.+..+ .......|
T Consensus 165 At~le~~~Erk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~-----vkety~~I-k~~~Y~~P 238 (592)
T KOG0575|consen 165 ATQLEYDGERKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKT-----VKETYNKI-KLNEYSMP 238 (592)
T ss_pred eeeecCcccccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccch-----HHHHHHHH-HhcCcccc
Confidence 854 346789999999999999999999997531 12333333 23445667
Q ss_pred hhhHHHHHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 668 LDLAEELAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 668 ~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
...+.+..+||.++|..| |.+|||+.+|+..
T Consensus 239 ~~ls~~A~dLI~~lL~~~--P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 239 SHLSAEAKDLIRKLLRPN--PSERPSLDEVLDH 269 (592)
T ss_pred cccCHHHHHHHHHHhcCC--cccCCCHHHHhcC
Confidence 789999999999999999 9999999999853
No 6
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.4e-39 Score=341.15 Aligned_cols=224 Identities=22% Similarity=0.281 Sum_probs=185.6
Q ss_pred HhhccccccccccccCCceEEEEEEE--CCeEEEEEEccCC----C-----CHHHHHHHHHHHhccCCCCccceeecccc
Q 003594 458 LATEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNG----L-----SEEDFQAKVSFLTAVRHPHLVAVMGCCSE 526 (808)
Q Consensus 458 ~at~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~----~-----~~~~~~~Ei~il~~l~HpnIv~l~g~~~~ 526 (808)
.++++|+...+.+|.|+||.|-+|.. +|+.||||+++.. . ......+|++||++|+|||||+++++|..
T Consensus 168 ks~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~ 247 (475)
T KOG0615|consen 168 KSFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEV 247 (475)
T ss_pred chhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeec
Confidence 34677888888899999999999998 7899999999821 1 12345799999999999999999999965
Q ss_pred --ceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCC--
Q 003594 527 --LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRN-- 602 (808)
Q Consensus 527 --~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~-- 602 (808)
..||||||+.||+|.+.+- ..+.+.+..-.-++.|++.||.|||+ .||+||||||+||||..+
T Consensus 248 ~ds~YmVlE~v~GGeLfd~vv----------~nk~l~ed~~K~~f~Qll~avkYLH~---~GI~HRDiKPeNILl~~~~e 314 (475)
T KOG0615|consen 248 PDSSYMVLEYVEGGELFDKVV----------ANKYLREDLGKLLFKQLLTAVKYLHS---QGIIHRDIKPENILLSNDAE 314 (475)
T ss_pred CCceEEEEEEecCccHHHHHH----------hccccccchhHHHHHHHHHHHHHHHH---cCcccccCCcceEEeccCCc
Confidence 7799999999999999994 45667778888999999999999999 669999999999999766
Q ss_pred -ccEEEEeCCCccc---------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHH
Q 003594 603 -LVAKISGLGLNIC---------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTT 654 (808)
Q Consensus 603 -~~~kl~DfGla~~---------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~ 654 (808)
..+||+|||+|+. ..+..++|+||+|||||-+++|.+||.... .+...
T Consensus 315 ~~llKItDFGlAK~~g~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~----~~~sl 390 (475)
T KOG0615|consen 315 DCLLKITDFGLAKVSGEGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEY----TDPSL 390 (475)
T ss_pred ceEEEecccchhhccccceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCccccc----CCccH
Confidence 8999999999975 123458999999999999999999997532 12223
Q ss_pred HHHHhccCCCCC---ChhhHHHHHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 655 LMQVLDGNAGIW---PLDLAEELAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 655 ~~~~ld~~~~~~---p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
..++..+..... ...++++..+||.+||..| |..|||+.|+++.
T Consensus 391 ~eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~Vd--P~~R~s~~eaL~h 437 (475)
T KOG0615|consen 391 KEQILKGRYAFGPLQWDRISEEALDLINWMLVVD--PENRPSADEALNH 437 (475)
T ss_pred HHHHhcCcccccChhhhhhhHHHHHHHHHhhEeC--cccCcCHHHHhcC
Confidence 345555533322 2468999999999999999 9999999998853
No 7
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-38 Score=320.32 Aligned_cols=219 Identities=21% Similarity=0.317 Sum_probs=182.8
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEcc----CCCCHHHHHHHHHHHhccCCCCccceeec-ccc---ceEEEEeecC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLN----NGLSEEDFQAKVSFLTAVRHPHLVAVMGC-CSE---LKCIVFEYMP 536 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~----~~~~~~~~~~Ei~il~~l~HpnIv~l~g~-~~~---~~~lV~Ey~~ 536 (808)
.+.+|+|+||.||++.. +|..||.|.++ +....+....|+.+|++|+|||||++++. +.+ ..+||||||.
T Consensus 24 l~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivmE~c~ 103 (375)
T KOG0591|consen 24 LKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVMELCD 103 (375)
T ss_pred HHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHHHhhc
Confidence 45678999999999987 89999999998 22234678899999999999999999994 433 4789999999
Q ss_pred CCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCC-CeEecCCCCCCcccCCCccEEEEeCCCccc
Q 003594 537 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPR-PIVHGSLTPSSILLDRNLVAKISGLGLNIC 615 (808)
Q Consensus 537 ~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~-~iiHrDLKp~NILld~~~~~kl~DfGla~~ 615 (808)
+|+|..++.... .....+++..+++++.|++.||..+|+.-|+ .|+||||||.||+|+.+|.+||+|||+++.
T Consensus 104 ~GDLsqmIk~~K------~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~ 177 (375)
T KOG0591|consen 104 AGDLSQMIKHFK------KQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRF 177 (375)
T ss_pred ccCHHHHHHHHH------hccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhH
Confidence 999999997764 4567899999999999999999999995433 399999999999999999999999999865
Q ss_pred -------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCC-hh
Q 003594 616 -------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWP-LD 669 (808)
Q Consensus 616 -------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p-~~ 669 (808)
..|+.||||||+||++|||+.-.+||..... -.....+-.+..++.| ..
T Consensus 178 l~s~~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~n~-----~~L~~KI~qgd~~~~p~~~ 252 (375)
T KOG0591|consen 178 LSSKTTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGDNL-----LSLCKKIEQGDYPPLPDEH 252 (375)
T ss_pred hcchhHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccccH-----HHHHHHHHcCCCCCCcHHH
Confidence 4689999999999999999999999975321 1112334444555566 67
Q ss_pred hHHHHHHHHHHhhccCCCcCccccHHhhH
Q 003594 670 LAEELAGIALKCLSADQDANRDLRIAGVM 698 (808)
Q Consensus 670 ~~~~l~~Li~~Cl~~dp~p~~Rps~~evl 698 (808)
++.++..||..|+..| |+.||+...++
T Consensus 253 YS~~l~~li~~ci~vd--~~~RP~t~~~v 279 (375)
T KOG0591|consen 253 YSTDLRELINMCIAVD--PEQRPDTVPYV 279 (375)
T ss_pred hhhHHHHHHHHHccCC--cccCCCcchHH
Confidence 9999999999999999 99999854433
No 8
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-37 Score=327.22 Aligned_cols=216 Identities=25% Similarity=0.433 Sum_probs=175.2
Q ss_pred ccccccccccccCCceEEEEEEE--CCeEEEEEEccCCC----CHHHHHHHHHHHhccCCCCccceeecccc--ceEEEE
Q 003594 461 EDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNGL----SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVF 532 (808)
Q Consensus 461 ~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~----~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~ 532 (808)
++|.-..+ +|.|+||+||+|++ ++..||||.+.... ..+.+..|+.+|+.|+|||||.|++++.. ..||||
T Consensus 10 ~~y~~~~~-iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 10 GDYELSRE-IGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred ccceehhh-ccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 34544444 68999999999998 67999999998432 34667899999999999999999999965 889999
Q ss_pred eecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCC------ccEE
Q 003594 533 EYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRN------LVAK 606 (808)
Q Consensus 533 Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~------~~~k 606 (808)
|||.||+|.++|+ ..+.+++.+...++.||+.||++||+ ++||||||||.||||+.+ -.+|
T Consensus 89 EyC~gGDLs~yi~----------~~~~l~e~t~r~Fm~QLA~alq~L~~---~~IiHRDLKPQNiLLs~~~~~~~~~~LK 155 (429)
T KOG0595|consen 89 EYCNGGDLSDYIR----------RRGRLPEATARHFMQQLASALQFLHE---NNIIHRDLKPQNILLSTTARNDTSPVLK 155 (429)
T ss_pred EeCCCCCHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCcceEEeccCCCCCCCceEE
Confidence 9999999999995 44579999999999999999999999 569999999999999765 5799
Q ss_pred EEeCCCccc------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhc--
Q 003594 607 ISGLGLNIC------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLD-- 660 (808)
Q Consensus 607 l~DfGla~~------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld-- 660 (808)
|+|||+|+. ..|+.|+|+||+|+|||+|++|++||..... .+.+..+-.
T Consensus 156 IADFGfAR~L~~~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~-----~eL~~~~~k~~ 230 (429)
T KOG0595|consen 156 IADFGFARFLQPGSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAETP-----KELLLYIKKGN 230 (429)
T ss_pred ecccchhhhCCchhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccCH-----HHHHHHHhccc
Confidence 999999975 4699999999999999999999999975321 111111111
Q ss_pred cCCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhh
Q 003594 661 GNAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGV 697 (808)
Q Consensus 661 ~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~ev 697 (808)
...+..+...+..+.+|+...+..+ +..|.+..+.
T Consensus 231 ~~~~~~~~~~s~~~~~Ll~~ll~~~--~~~~~~~~~~ 265 (429)
T KOG0595|consen 231 EIVPVLPAELSNPLRELLISLLQRN--PKDRISFEDF 265 (429)
T ss_pred cccCchhhhccCchhhhhhHHHhcC--ccccCchHHh
Confidence 1334455567778889999999988 6677664443
No 9
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-37 Score=322.46 Aligned_cols=212 Identities=25% Similarity=0.346 Sum_probs=183.6
Q ss_pred ccccccccccccCCceEEEEEEE--CCeEEEEEEccC-----CCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEE
Q 003594 461 EDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN-----GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIV 531 (808)
Q Consensus 461 ~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~-----~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV 531 (808)
++|. ..+++|+|+||.||.++. +++.+|+|+++. .........|..||.+++||+||+++..|++ .+|||
T Consensus 25 ~dF~-~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 25 DDFE-ILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhee-eeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 4454 467889999999999997 689999999982 2345678899999999999999999999977 89999
Q ss_pred EeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCC
Q 003594 532 FEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLG 611 (808)
Q Consensus 532 ~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfG 611 (808)
+||+.||.|..+| .+...+++..+..++.+|+.||.|||+ ++||||||||+|||||.+|+++|+|||
T Consensus 104 ld~~~GGeLf~hL----------~~eg~F~E~~arfYlaEi~lAL~~LH~---~gIiyRDlKPENILLd~~GHi~LtDFg 170 (357)
T KOG0598|consen 104 LDYLNGGELFYHL----------QREGRFSEDRARFYLAEIVLALGYLHS---KGIIYRDLKPENILLDEQGHIKLTDFG 170 (357)
T ss_pred EeccCCccHHHHH----------HhcCCcchhHHHHHHHHHHHHHHHHHh---CCeeeccCCHHHeeecCCCcEEEeccc
Confidence 9999999999999 466789999999999999999999999 679999999999999999999999999
Q ss_pred Cccc-------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCC
Q 003594 612 LNIC-------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIW 666 (808)
Q Consensus 612 la~~-------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~ 666 (808)
+|+. ..|+..+|+||+||++|||++|.+||...+ .......++.......
T Consensus 171 L~k~~~~~~~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~-----~~~~~~~I~~~k~~~~ 245 (357)
T KOG0598|consen 171 LCKEDLKDGDATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAED-----VKKMYDKILKGKLPLP 245 (357)
T ss_pred cchhcccCCCccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCcc-----HHHHHHHHhcCcCCCC
Confidence 9974 468999999999999999999999997632 2334445555555566
Q ss_pred ChhhHHHHHHHHHHhhccCCCcCcccc
Q 003594 667 PLDLAEELAGIALKCLSADQDANRDLR 693 (808)
Q Consensus 667 p~~~~~~l~~Li~~Cl~~dp~p~~Rps 693 (808)
|...+.+..+|+.++|..| |+.|..
T Consensus 246 p~~ls~~ardll~~LL~rd--p~~RLg 270 (357)
T KOG0598|consen 246 PGYLSEEARDLLKKLLKRD--PRQRLG 270 (357)
T ss_pred CccCCHHHHHHHHHHhccC--HHHhcC
Confidence 6668999999999999999 888864
No 10
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=9.9e-36 Score=323.79 Aligned_cols=212 Identities=21% Similarity=0.314 Sum_probs=178.9
Q ss_pred hccccccccccccCCceEEEEEEE--CCeEEEEEEccC-----CCCHHHHHHHHHHHhccCCCCccceeecccc--ceEE
Q 003594 460 TEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN-----GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCI 530 (808)
Q Consensus 460 t~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~-----~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~l 530 (808)
.++|. .++++|+|+||.||+++- +|..+|+|+++. ....+.+..|-.+|...++|+||+||..|.+ ++||
T Consensus 140 ~~DFe-~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 140 LDDFE-LLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred cccch-hheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 34454 457889999999999997 789999999983 2335678899999999999999999999977 8999
Q ss_pred EEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeC
Q 003594 531 VFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGL 610 (808)
Q Consensus 531 V~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~Df 610 (808)
||||+|||++..+| .....|++..+..++.+++.|+..||. .|+|||||||+|+|||..|++||+||
T Consensus 219 iMEylPGGD~mTLL----------~~~~~L~e~~arfYiaE~vlAI~~iH~---~gyIHRDIKPdNlLiD~~GHiKLSDF 285 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLL----------MRKDTLTEDWARFYIAETVLAIESIHQ---LGYIHRDIKPDNLLIDAKGHIKLSDF 285 (550)
T ss_pred EEEecCCccHHHHH----------HhcCcCchHHHHHHHHHHHHHHHHHHH---cCcccccCChhheeecCCCCEeeccc
Confidence 99999999999999 567889999999999999999999999 56999999999999999999999999
Q ss_pred CCccc------------------------------------------------------------------------CCC
Q 003594 611 GLNIC------------------------------------------------------------------------DQL 618 (808)
Q Consensus 611 Gla~~------------------------------------------------------------------------~~~ 618 (808)
|||.. ..|
T Consensus 286 GLs~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY 365 (550)
T KOG0605|consen 286 GLSTGLDKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGY 365 (550)
T ss_pred cccchhhhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCC
Confidence 99832 236
Q ss_pred CcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccC-CCCCC--hhhHHHHHHHHHHhhccCCCcCcccc
Q 003594 619 NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGN-AGIWP--LDLAEELAGIALKCLSADQDANRDLR 693 (808)
Q Consensus 619 t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~-~~~~p--~~~~~~l~~Li~~Cl~~dp~p~~Rps 693 (808)
+..+|+||||||+||||.|.|||... .....+..++... ...+| ..++.+..+||.+||. | |..|..
T Consensus 366 ~~~cDwWSLG~ImyEmLvGyPPF~s~-----tp~~T~rkI~nwr~~l~fP~~~~~s~eA~DLI~rll~-d--~~~RLG 435 (550)
T KOG0605|consen 366 GKECDWWSLGCIMYEMLVGYPPFCSE-----TPQETYRKIVNWRETLKFPEEVDLSDEAKDLITRLLC-D--PENRLG 435 (550)
T ss_pred CccccHHHHHHHHHHHHhCCCCCCCC-----CHHHHHHHHHHHhhhccCCCcCcccHHHHHHHHHHhc-C--HHHhcC
Confidence 88999999999999999999999764 2334444554431 12233 3567999999999998 8 888876
No 11
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.1e-37 Score=351.59 Aligned_cols=230 Identities=25% Similarity=0.438 Sum_probs=198.5
Q ss_pred ccccCCceEEEEEEECC-------eEEEEEEccCCCC---HHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecC
Q 003594 469 LKCAGDWTNVYRGRLNH-------ASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMP 536 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~~~-------~~vAiK~l~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~ 536 (808)
-+|.|.||.||+|...| ..||||.+++..+ .++|++|+++|..|+|||||+|+|+|.+ ..|+|+|||.
T Consensus 493 eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~MvFEYm~ 572 (774)
T KOG1026|consen 493 ELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLCMVFEYMD 572 (774)
T ss_pred hhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeEEEEEecc
Confidence 35899999999999732 5799999995443 4789999999999999999999999966 8899999999
Q ss_pred CCCHHHHHhhcccccccccc----CCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCC
Q 003594 537 NGNLRDKLFTSQRNYKNCSR----ARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 612 (808)
Q Consensus 537 ~gsL~~~l~~~~~~~~~~~~----~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGl 612 (808)
.|+|.++|............ ..+|+..+.+.|+.|||.|+.||-++ .+|||||-..|+|+.++..+||+|||+
T Consensus 573 ~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~---~FVHRDLATRNCLVge~l~VKIsDfGL 649 (774)
T KOG1026|consen 573 HGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSH---HFVHRDLATRNCLVGENLVVKISDFGL 649 (774)
T ss_pred cccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhC---cccccchhhhhceeccceEEEeccccc
Confidence 99999999765432211111 44599999999999999999999995 499999999999999999999999999
Q ss_pred ccc---------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCCC
Q 003594 613 NIC---------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNAG 664 (808)
Q Consensus 613 a~~---------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~~ 664 (808)
++. +.+|.+||||||||+|||+++ |+.||... .+++.+..+-++...
T Consensus 650 sRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~gl-----Sn~EVIe~i~~g~lL 724 (774)
T KOG1026|consen 650 SRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGL-----SNQEVIECIRAGQLL 724 (774)
T ss_pred chhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCccccc-----chHHHHHHHHcCCcc
Confidence 964 568999999999999999999 88887654 445666677777788
Q ss_pred CCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHHHHhc
Q 003594 665 IWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVRKKA 708 (808)
Q Consensus 665 ~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~~~~ 708 (808)
..|.++|.++..|+..||+.+ |.+||+++||-..|+..-...
T Consensus 725 ~~Pe~CP~~vY~LM~~CW~~~--P~~RPsF~eI~~~L~~~~~~s 766 (774)
T KOG1026|consen 725 SCPENCPTEVYSLMLECWNEN--PKRRPSFKEIHSRLQAWAQAS 766 (774)
T ss_pred cCCCCCCHHHHHHHHHHhhcC--cccCCCHHHHHHHHHHHHhcC
Confidence 899999999999999999999 999999999999999886543
No 12
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=3.4e-36 Score=323.70 Aligned_cols=234 Identities=22% Similarity=0.324 Sum_probs=191.3
Q ss_pred cccccCHHHHHHhhccccccccccccCCceEEEEEEECCeEEEEEEccCC-CC----HHHHHHHHHHHhccCCCCcccee
Q 003594 447 AFREYAAEDIRLATEDFSERFRLKCAGDWTNVYRGRLNHASVAIKTLNNG-LS----EEDFQAKVSFLTAVRHPHLVAVM 521 (808)
Q Consensus 447 ~~~~~~~~ei~~at~~f~~~~~i~g~G~~g~Vy~~~~~~~~vAiK~l~~~-~~----~~~~~~Ei~il~~l~HpnIv~l~ 521 (808)
.++.++.++| ++... .++|.|++|.||+|.++|+.||||++... .. .+.|.+|+.+|.+++|||||+++
T Consensus 11 ~~~~i~~~~i-----~~~~~-~~i~~g~~~~v~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~ 84 (283)
T PHA02988 11 DIKCIESDDI-----DKYTS-VLIKENDQNSIYKGIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIY 84 (283)
T ss_pred cceecCHHHc-----CCCCC-eEEeeCCceEEEEEEECCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 3455666666 22222 35678999999999999999999999732 22 35678999999999999999999
Q ss_pred ecccc------ceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCC
Q 003594 522 GCCSE------LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPS 595 (808)
Q Consensus 522 g~~~~------~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~ 595 (808)
|+|.+ ..++||||+++|+|.+++. ....++|...+.++.+++.||.|||+. .+++||||||+
T Consensus 85 g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~----------~~~~~~~~~~~~i~~~i~~~l~~lH~~--~~~~Hrdlkp~ 152 (283)
T PHA02988 85 GFIIDIVDDLPRLSLILEYCTRGYLREVLD----------KEKDLSFKTKLDMAIDCCKGLYNLYKY--TNKPYKNLTSV 152 (283)
T ss_pred eeEEecccCCCceEEEEEeCCCCcHHHHHh----------hCCCCChhHHHHHHHHHHHHHHHHHhc--CCCCCCcCChh
Confidence 99854 5689999999999999994 345689999999999999999999983 24889999999
Q ss_pred CcccCCCccEEEEeCCCccc------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhc
Q 003594 596 SILLDRNLVAKISGLGLNIC------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALD 651 (808)
Q Consensus 596 NILld~~~~~kl~DfGla~~------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~ 651 (808)
|||++.++.+||+|||+++. ..++.++|||||||++|||++|+.||.....
T Consensus 153 nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~----- 227 (283)
T PHA02988 153 SFLVTENYKLKIICHGLEKILSSPPFKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTT----- 227 (283)
T ss_pred hEEECCCCcEEEcccchHhhhccccccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCH-----
Confidence 99999999999999998752 2467899999999999999999999975321
Q ss_pred HHHHHHHhc-cCCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHHH
Q 003594 652 QTTLMQVLD-GNAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVR 705 (808)
Q Consensus 652 ~~~~~~~ld-~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~ 705 (808)
......+.. ......|..++..+.+|+.+||+.| |..|||+.+++..|+.++
T Consensus 228 ~~~~~~i~~~~~~~~~~~~~~~~l~~li~~cl~~d--p~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 228 KEIYDLIINKNNSLKLPLDCPLEIKCIVEACTSHD--SIKRPNIKEILYNLSLYK 280 (283)
T ss_pred HHHHHHHHhcCCCCCCCCcCcHHHHHHHHHHhcCC--cccCcCHHHHHHHHHHHH
Confidence 122223322 2344556678899999999999999 999999999999999875
No 13
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=9.5e-37 Score=331.19 Aligned_cols=211 Identities=24% Similarity=0.309 Sum_probs=181.7
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCC-----CCHHHHHHHHHHHhcc-CCCCccceeecccc--ceEEEEeecCC
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNG-----LSEEDFQAKVSFLTAV-RHPHLVAVMGCCSE--LKCIVFEYMPN 537 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-----~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~~~lV~Ey~~~ 537 (808)
+++|.|+|++||+|+. +++.||||++... .-.+-+.+|-.+|.+| .||.||+|+-.|.| .+|+|+||++|
T Consensus 79 ~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLYFvLe~A~n 158 (604)
T KOG0592|consen 79 KILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLYFVLEYAPN 158 (604)
T ss_pred heeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceEEEEEecCC
Confidence 4679999999999998 6899999999732 2234577899999999 89999999999987 89999999999
Q ss_pred CCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--
Q 003594 538 GNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-- 615 (808)
Q Consensus 538 gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-- 615 (808)
|+|.++|. ..+.|++.....++.+|+.||+|||+ .|||||||||+|||||.||++||+|||.|+.
T Consensus 159 Gdll~~i~----------K~Gsfde~caR~YAAeIldAleylH~---~GIIHRDlKPENILLd~dmhikITDFGsAK~l~ 225 (604)
T KOG0592|consen 159 GDLLDLIK----------KYGSFDETCARFYAAEILDALEYLHS---NGIIHRDLKPENILLDKDGHIKITDFGSAKILS 225 (604)
T ss_pred CcHHHHHH----------HhCcchHHHHHHHHHHHHHHHHHHHh---cCceeccCChhheeEcCCCcEEEeeccccccCC
Confidence 99999994 55779999999999999999999999 5699999999999999999999999999864
Q ss_pred ------------------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHh
Q 003594 616 ------------------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVL 659 (808)
Q Consensus 616 ------------------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~l 659 (808)
...++.+|+|+||||||+|+.|.|||....+ -..+..++
T Consensus 226 ~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ne-----yliFqkI~ 300 (604)
T KOG0592|consen 226 PSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANE-----YLIFQKIQ 300 (604)
T ss_pred hhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccH-----HHHHHHHH
Confidence 2357889999999999999999999976433 23344444
Q ss_pred ccCCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 660 DGNAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 660 d~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
+ ....||...++.+.+||.+.|..| |++|+++.+|.+
T Consensus 301 ~-l~y~fp~~fp~~a~dLv~KLLv~d--p~~Rlt~~qIk~ 337 (604)
T KOG0592|consen 301 A-LDYEFPEGFPEDARDLIKKLLVRD--PSDRLTSQQIKA 337 (604)
T ss_pred H-hcccCCCCCCHHHHHHHHHHHccC--ccccccHHHHhh
Confidence 3 455788889999999999999999 999999866554
No 14
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-37 Score=337.20 Aligned_cols=221 Identities=24% Similarity=0.426 Sum_probs=185.4
Q ss_pred ccccccCCceEEEEEEECCeEEEEEEcc-CCC---CHHHHHHHHHHHhccCCCCccceeecccc-ceEEEEeecCCCCHH
Q 003594 467 FRLKCAGDWTNVYRGRLNHASVAIKTLN-NGL---SEEDFQAKVSFLTAVRHPHLVAVMGCCSE-LKCIVFEYMPNGNLR 541 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~~~~~vAiK~l~-~~~---~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-~~~lV~Ey~~~gsL~ 541 (808)
...||+|+||+||+|.|.| .||||+++ ... ..+.|.+|+.++++-+|.||+-++|||.. ...||+-+|.|-+|+
T Consensus 397 ~~rIGsGsFGtV~Rg~whG-dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~AIiTqwCeGsSLY 475 (678)
T KOG0193|consen 397 GERIGSGSFGTVYRGRWHG-DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPLAIITQWCEGSSLY 475 (678)
T ss_pred cceeccccccceeeccccc-ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCceeeeehhccCchhh
Confidence 3567899999999999977 69999998 222 23679999999999999999999999976 668999999999999
Q ss_pred HHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc------
Q 003594 542 DKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC------ 615 (808)
Q Consensus 542 ~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~------ 615 (808)
.+|+. ....+...+.+.|+.|||.|+.|||. ++|||||||..||+|.+++++||+|||++..
T Consensus 476 ~hlHv---------~etkfdm~~~idIAqQiaqGM~YLHA---K~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g 543 (678)
T KOG0193|consen 476 THLHV---------QETKFDMNTTIDIAQQIAQGMDYLHA---KNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSG 543 (678)
T ss_pred hhccc---------hhhhhhHHHHHHHHHHHHHhhhhhhh---hhhhhhhccccceEEccCCcEEEecccceeeeeeecc
Confidence 99973 45678999999999999999999999 7899999999999999999999999999843
Q ss_pred ------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhcc----CCCCCC
Q 003594 616 ------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDG----NAGIWP 667 (808)
Q Consensus 616 ------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~----~~~~~p 667 (808)
..|++.+||||||+++|||+||..||... .. ...+..+-.+ ......
T Consensus 544 ~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~-~~----dqIifmVGrG~l~pd~s~~~ 618 (678)
T KOG0193|consen 544 EQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQ-NR----DQIIFMVGRGYLMPDLSKIR 618 (678)
T ss_pred ccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCC-Ch----hheEEEecccccCccchhhh
Confidence 46899999999999999999999999732 11 1111111111 122233
Q ss_pred hhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHHHHh
Q 003594 668 LDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVRKK 707 (808)
Q Consensus 668 ~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~~~ 707 (808)
..++.++.+|+..||.++ +.+||.+.+|+..|+.+...
T Consensus 619 s~~pk~mk~Ll~~C~~~~--~~eRP~F~~il~~l~~l~~~ 656 (678)
T KOG0193|consen 619 SNCPKAMKRLLSDCWKFD--REERPLFPQLLSKLEELLPS 656 (678)
T ss_pred ccCHHHHHHHHHHHHhcC--cccCccHHHHHHHHHHhhhc
Confidence 468889999999999999 99999999999998888653
No 15
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=8.5e-37 Score=330.32 Aligned_cols=225 Identities=22% Similarity=0.380 Sum_probs=189.5
Q ss_pred cccccCHHHHHHhhccccccccccccCCceEEEEEEECCeEEEEEEccCCCCHHHHHHHHHHHhccCCCCccceeecccc
Q 003594 447 AFREYAAEDIRLATEDFSERFRLKCAGDWTNVYRGRLNHASVAIKTLNNGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE 526 (808)
Q Consensus 447 ~~~~~~~~ei~~at~~f~~~~~i~g~G~~g~Vy~~~~~~~~vAiK~l~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~ 526 (808)
..+++.|++|. .+..+|.|+.|.||+|++.++.||||+++. .-..+|.-|++|+||||+.|.|+|..
T Consensus 117 e~WeiPFe~Is--------ELeWlGSGaQGAVF~Grl~netVAVKKV~e-----lkETdIKHLRkLkH~NII~FkGVCtq 183 (904)
T KOG4721|consen 117 ELWEIPFEEIS--------ELEWLGSGAQGAVFLGRLHNETVAVKKVRE-----LKETDIKHLRKLKHPNIITFKGVCTQ 183 (904)
T ss_pred hhccCCHHHhh--------hhhhhccCcccceeeeeccCceehhHHHhh-----hhhhhHHHHHhccCcceeeEeeeecC
Confidence 34667777773 246789999999999999999999999872 22357888999999999999999987
Q ss_pred --ceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCcc
Q 003594 527 --LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLV 604 (808)
Q Consensus 527 --~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~ 604 (808)
.+|||||||+.|-|..+| ....+++......+..+||.|++|||.++ |||||||.-||||..+..
T Consensus 184 sPcyCIiMEfCa~GqL~~VL----------ka~~~itp~llv~Wsk~IA~GM~YLH~hK---IIHRDLKSPNiLIs~~d~ 250 (904)
T KOG4721|consen 184 SPCYCIIMEFCAQGQLYEVL----------KAGRPITPSLLVDWSKGIAGGMNYLHLHK---IIHRDLKSPNILISYDDV 250 (904)
T ss_pred CceeEEeeeccccccHHHHH----------hccCccCHHHHHHHHHHhhhhhHHHHHhh---HhhhccCCCceEeeccce
Confidence 678999999999999999 45577888889999999999999999966 999999999999999999
Q ss_pred EEEEeCCCccc------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHh-
Q 003594 605 AKISGLGLNIC------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVL- 659 (808)
Q Consensus 605 ~kl~DfGla~~------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~l- 659 (808)
+||+|||.++. ...+.|+|||||||||||||||..||..++.. ..+..+-
T Consensus 251 VKIsDFGTS~e~~~~STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdss-----AIIwGVGs 325 (904)
T KOG4721|consen 251 VKISDFGTSKELSDKSTKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSS-----AIIWGVGS 325 (904)
T ss_pred EEeccccchHhhhhhhhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchh-----eeEEeccC
Confidence 99999999853 45789999999999999999999999765431 0000110
Q ss_pred ccCCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHH
Q 003594 660 DGNAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEV 704 (808)
Q Consensus 660 d~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l 704 (808)
+..-.+.|..+++.|.-|+.+||+.. ||.||++.+++..|+-.
T Consensus 326 NsL~LpvPstcP~GfklL~Kqcw~sK--pRNRPSFrqil~HldIa 368 (904)
T KOG4721|consen 326 NSLHLPVPSTCPDGFKLLLKQCWNSK--PRNRPSFRQILLHLDIA 368 (904)
T ss_pred CcccccCcccCchHHHHHHHHHHhcC--CCCCccHHHHHHHHhhc
Confidence 11334677889999999999999998 99999999999988643
No 16
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-36 Score=320.95 Aligned_cols=220 Identities=24% Similarity=0.331 Sum_probs=181.8
Q ss_pred cccccccCCceEEEEEEE--CCeEEEEEEccCCC--CHHHHHHHHHHHhccCCCCccceeecc--cc--ceEEEEeecCC
Q 003594 466 RFRLKCAGDWTNVYRGRL--NHASVAIKTLNNGL--SEEDFQAKVSFLTAVRHPHLVAVMGCC--SE--LKCIVFEYMPN 537 (808)
Q Consensus 466 ~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~--~~~~~~~Ei~il~~l~HpnIv~l~g~~--~~--~~~lV~Ey~~~ 537 (808)
..+++|+|+||.||++.. +|...|||.+.... ..+.+.+|+.+|++++|||||+++|.. .+ .++|+|||+++
T Consensus 21 ~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mEy~~~ 100 (313)
T KOG0198|consen 21 KGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFMEYAPG 100 (313)
T ss_pred hhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeeeccCC
Confidence 346789999999999998 47999999987321 145689999999999999999999973 33 48899999999
Q ss_pred CCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCC-CccEEEEeCCCccc-
Q 003594 538 GNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDR-NLVAKISGLGLNIC- 615 (808)
Q Consensus 538 gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~-~~~~kl~DfGla~~- 615 (808)
|||.+++... ...|++..+.+++.||+.||.|||+ ++||||||||+||||+. ++.+||+|||+++.
T Consensus 101 GsL~~~~~~~---------g~~l~E~~v~~ytr~iL~GL~ylHs---~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~ 168 (313)
T KOG0198|consen 101 GSLSDLIKRY---------GGKLPEPLVRRYTRQILEGLAYLHS---KGIVHCDIKPANILLDPSNGDVKLADFGLAKKL 168 (313)
T ss_pred CcHHHHHHHc---------CCCCCHHHHHHHHHHHHHHHHHHHh---CCEeccCcccceEEEeCCCCeEEeccCcccccc
Confidence 9999999643 1279999999999999999999999 67999999999999999 79999999998752
Q ss_pred --------------------------CCC--CcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCC
Q 003594 616 --------------------------DQL--NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWP 667 (808)
Q Consensus 616 --------------------------~~~--t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p 667 (808)
... .+++|||||||+++||+||++||..... .....+........+.+|
T Consensus 169 ~~~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~---~~~~~~~ig~~~~~P~ip 245 (313)
T KOG0198|consen 169 ESKGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFE---EAEALLLIGREDSLPEIP 245 (313)
T ss_pred ccccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcc---hHHHHHHHhccCCCCCCC
Confidence 111 2389999999999999999999875300 112222233334566889
Q ss_pred hhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHH
Q 003594 668 LDLAEELAGIALKCLSADQDANRDLRIAGVMKELD 702 (808)
Q Consensus 668 ~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~ 702 (808)
...+.+..+++.+|+..| |..|||+.+++...-
T Consensus 246 ~~ls~~a~~Fl~~C~~~~--p~~Rpta~eLL~hpf 278 (313)
T KOG0198|consen 246 DSLSDEAKDFLRKCFKRD--PEKRPTAEELLEHPF 278 (313)
T ss_pred cccCHHHHHHHHHHhhcC--cccCcCHHHHhhChh
Confidence 999999999999999999 999999999987653
No 17
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=1.1e-35 Score=327.65 Aligned_cols=231 Identities=23% Similarity=0.372 Sum_probs=184.3
Q ss_pred ccccccCCceEEEEEEE-------CCeEEEEEEccCCCC---HHHHHHHHHHHhcc-CCCCccceeecccc---ceEEEE
Q 003594 467 FRLKCAGDWTNVYRGRL-------NHASVAIKTLNNGLS---EEDFQAKVSFLTAV-RHPHLVAVMGCCSE---LKCIVF 532 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~-------~~~~vAiK~l~~~~~---~~~~~~Ei~il~~l-~HpnIv~l~g~~~~---~~~lV~ 532 (808)
.+.+|.|+||.||+|.+ ++..||||++..... ...+.+|+.+|..+ +|||||+++|+|.. ..++||
T Consensus 12 ~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ 91 (338)
T cd05102 12 GKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPNGPLMVIV 91 (338)
T ss_pred eeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCCCceEEEE
Confidence 45678999999999975 236799999974322 35688999999999 89999999998864 578999
Q ss_pred eecCCCCHHHHHhhccccccc----------------------------------------------------cccCCCC
Q 003594 533 EYMPNGNLRDKLFTSQRNYKN----------------------------------------------------CSRARAL 560 (808)
Q Consensus 533 Ey~~~gsL~~~l~~~~~~~~~----------------------------------------------------~~~~~~l 560 (808)
||+++|+|.+++......... .....++
T Consensus 92 ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 171 (338)
T cd05102 92 EFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPL 171 (338)
T ss_pred ecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhccccccCCC
Confidence 999999999999753210000 0012458
Q ss_pred CHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-------------------------
Q 003594 561 RWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC------------------------- 615 (808)
Q Consensus 561 ~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~------------------------- 615 (808)
++..++.++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 172 ~~~~~~~~~~qi~~aL~~LH~---~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~ 248 (338)
T cd05102 172 TMEDLICYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKWMAPESI 248 (338)
T ss_pred CHHHHHHHHHHHHHHHHHHHH---CCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCccccCcHHh
Confidence 999999999999999999999 6699999999999999999999999998742
Q ss_pred --CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHHHHHHHHHhhccCCCcCccc
Q 003594 616 --DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAGIALKCLSADQDANRDL 692 (808)
Q Consensus 616 --~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rp 692 (808)
..++.++|||||||+||||++ |.+||..... .......+.++.....|..++..+.+|+.+||+.| |..||
T Consensus 249 ~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d--p~~RP 322 (338)
T cd05102 249 FDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQI----NEEFCQRLKDGTRMRAPENATPEIYRIMLACWQGD--PKERP 322 (338)
T ss_pred hcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCc----cHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHccCC--hhhCc
Confidence 236789999999999999997 9999865321 11222333334344456677889999999999999 99999
Q ss_pred cHHhhHHHHHHHHH
Q 003594 693 RIAGVMKELDEVRK 706 (808)
Q Consensus 693 s~~evl~~L~~l~~ 706 (808)
++.++++.|+.+..
T Consensus 323 s~~el~~~l~~~~~ 336 (338)
T cd05102 323 TFSALVEILGDLLQ 336 (338)
T ss_pred CHHHHHHHHHHHHh
Confidence 99999999998764
No 18
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-35 Score=349.19 Aligned_cols=232 Identities=26% Similarity=0.408 Sum_probs=200.6
Q ss_pred cccccccCCceEEEEEEE---CC----eEEEEEEccCCC---CHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEe
Q 003594 466 RFRLKCAGDWTNVYRGRL---NH----ASVAIKTLNNGL---SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFE 533 (808)
Q Consensus 466 ~~~i~g~G~~g~Vy~~~~---~~----~~vAiK~l~~~~---~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~E 533 (808)
....+|+|.||.||.|.+ +| ..||||.+.... ...+|.+|..+|++++|||||+++|+|.+ ..+|++|
T Consensus 696 l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~i~le 775 (1025)
T KOG1095|consen 696 LLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPLILLE 775 (1025)
T ss_pred eeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcEEEeh
Confidence 346789999999999998 33 349999998443 34689999999999999999999999976 7899999
Q ss_pred ecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCc
Q 003594 534 YMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 613 (808)
Q Consensus 534 y~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla 613 (808)
||+||+|..+|.+.+.+. -....|+..+.+.|+.|||+|+.||++ +++|||||...|+||+...++||+|||+|
T Consensus 776 yM~gGDL~sflr~~r~~~---~~~~~L~~~dLl~~a~dvA~G~~YLe~---~~fvHRDLAaRNCLL~~~r~VKIaDFGlA 849 (1025)
T KOG1095|consen 776 YMEGGDLLSFLRESRPAP---FQPSNLSMRDLLAFALDVAKGMNYLES---KHFVHRDLAARNCLLDERRVVKIADFGLA 849 (1025)
T ss_pred hcccCcHHHHHHhccccc---CCCCCCCHHHHHHHHHHHhhhhHHHHh---CCCcCcchhhhheeecccCcEEEcccchh
Confidence 999999999998654322 235679999999999999999999999 66999999999999999999999999999
Q ss_pred cc---------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCCCC
Q 003594 614 IC---------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNAGI 665 (808)
Q Consensus 614 ~~---------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~~~ 665 (808)
+. +.+|.|+|||||||+|||++| |..||+... ....+..++.+.+.+
T Consensus 850 rDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~-----n~~v~~~~~~ggRL~ 924 (1025)
T KOG1095|consen 850 RDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRS-----NFEVLLDVLEGGRLD 924 (1025)
T ss_pred HhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcc-----hHHHHHHHHhCCccC
Confidence 73 457999999999999999999 899998642 334455566777888
Q ss_pred CChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHHHHhccc
Q 003594 666 WPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVRKKADG 710 (808)
Q Consensus 666 ~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~~~~~~ 710 (808)
.|..|++.+.+|+..||+.+ |..||++..+++.+..+......
T Consensus 925 ~P~~CP~~ly~lM~~CW~~~--pe~RP~F~~i~~q~~~i~~~~~~ 967 (1025)
T KOG1095|consen 925 PPSYCPEKLYQLMLQCWKHD--PEDRPSFRTIVEQDPAISNAALG 967 (1025)
T ss_pred CCCCCChHHHHHHHHHccCC--hhhCccHHHHHhhhhhhhhhhcc
Confidence 99999999999999999999 99999999999999888766544
No 19
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=8e-36 Score=303.07 Aligned_cols=220 Identities=20% Similarity=0.258 Sum_probs=172.1
Q ss_pred ccccccccCCceEEEEEEE--CCeEEEEEEccCCCC----HHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecC
Q 003594 465 ERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNGLS----EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMP 536 (808)
Q Consensus 465 ~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~~----~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~ 536 (808)
+.+..+|.|+||.||+|+. +|+.||||++....+ .+-..+|+.+|++++|||+|.|+.+|.. ..+||+|||+
T Consensus 5 E~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE~~d 84 (396)
T KOG0593|consen 5 EKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFEYCD 84 (396)
T ss_pred hhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEeeecc
Confidence 3345568999999999998 789999999984333 2567899999999999999999999966 7899999998
Q ss_pred CCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-
Q 003594 537 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC- 615 (808)
Q Consensus 537 ~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~- 615 (808)
. ++.+.|. .....++......|+.|++.|+.|+|+++ +|||||||+||||+.+|.+||||||+|+.
T Consensus 85 h-TvL~eLe---------~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n---~IHRDIKPENILit~~gvvKLCDFGFAR~L 151 (396)
T KOG0593|consen 85 H-TVLHELE---------RYPNGVPSELVKKYLYQLLKAIHFCHKNN---CIHRDIKPENILITQNGVVKLCDFGFARTL 151 (396)
T ss_pred h-HHHHHHH---------hccCCCCHHHHHHHHHHHHHHhhhhhhcC---eecccCChhheEEecCCcEEeccchhhHhh
Confidence 6 4444443 34567899999999999999999999955 99999999999999999999999999864
Q ss_pred -------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHH---Hhhhc------HHHHHHHhcc
Q 003594 616 -------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEK---AMALD------QTTLMQVLDG 661 (808)
Q Consensus 616 -------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~---~~~~~------~~~~~~~ld~ 661 (808)
.+|++.+||||+||++.||++|.|.|....+ ...+. ......+...
T Consensus 152 ~~pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~ 231 (396)
T KOG0593|consen 152 SAPGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSS 231 (396)
T ss_pred cCCcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhcc
Confidence 3689999999999999999999987753211 00000 0011111111
Q ss_pred ------CCCCCC----------hhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 662 ------NAGIWP----------LDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 662 ------~~~~~p----------~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
...+-| +..+.-+.+|+..||..| |.+|++.++++.
T Consensus 232 N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~d--P~~R~sc~qll~ 283 (396)
T KOG0593|consen 232 NPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMD--PDDRLSCEQLLH 283 (396)
T ss_pred CCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCC--ccccccHHHHhc
Confidence 000111 245668999999999999 999999999874
No 20
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=1.4e-35 Score=321.49 Aligned_cols=211 Identities=22% Similarity=0.335 Sum_probs=184.4
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccCC----CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNNG----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNG 538 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~g 538 (808)
+..+|+|+||.||||+. +.+.||||.+... .....+.+|++|++.|+|||||.++++|+. +.|+|.||+.|
T Consensus 7 ~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte~a~g- 85 (808)
T KOG0597|consen 7 YEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTEYAVG- 85 (808)
T ss_pred HHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEehhhhh-
Confidence 45678999999999997 5689999999732 223568999999999999999999999976 89999999985
Q ss_pred CHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc---
Q 003594 539 NLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC--- 615 (808)
Q Consensus 539 sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~--- 615 (808)
+|..+| .....++++.+..|+.+++.||.|||+ .+|+|||+||.||||+.+|++|+||||+|+.
T Consensus 86 ~L~~il----------~~d~~lpEe~v~~~a~~LVsaL~yLhs---~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~ 152 (808)
T KOG0597|consen 86 DLFTIL----------EQDGKLPEEQVRAIAYDLVSALYYLHS---NRILHRDMKPQNILLEKGGTLKLCDFGLARAMST 152 (808)
T ss_pred hHHHHH----------HhccCCCHHHHHHHHHHHHHHHHHHHh---cCcccccCCcceeeecCCCceeechhhhhhhccc
Confidence 999999 567889999999999999999999999 5599999999999999999999999999964
Q ss_pred ----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHH
Q 003594 616 ----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEE 673 (808)
Q Consensus 616 ----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~ 673 (808)
..|+..+|+||+|||+|||++|+|||.... -..+...+-.....||...+..
T Consensus 153 ~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a~s------i~~Lv~~I~~d~v~~p~~~S~~ 226 (808)
T KOG0597|consen 153 NTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYARS------ITQLVKSILKDPVKPPSTASSS 226 (808)
T ss_pred CceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchHHH------HHHHHHHHhcCCCCCcccccHH
Confidence 357889999999999999999999997532 2233344445567788899999
Q ss_pred HHHHHHHhhccCCCcCccccHHhhHH
Q 003594 674 LAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 674 l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
+.+++...|.+| |..|.++.+++.
T Consensus 227 f~nfl~gLL~kd--P~~RltW~~Ll~ 250 (808)
T KOG0597|consen 227 FVNFLQGLLIKD--PAQRLTWTDLLG 250 (808)
T ss_pred HHHHHHHHhhcC--hhhcccHHHHhc
Confidence 999999999999 999999999875
No 21
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-36 Score=337.81 Aligned_cols=245 Identities=26% Similarity=0.437 Sum_probs=211.7
Q ss_pred ccccCHHHHHHhhcccccc--------ccccccCCceEEEEEEE--CC---eEEEEEEccCCCC---HHHHHHHHHHHhc
Q 003594 448 FREYAAEDIRLATEDFSER--------FRLKCAGDWTNVYRGRL--NH---ASVAIKTLNNGLS---EEDFQAKVSFLTA 511 (808)
Q Consensus 448 ~~~~~~~ei~~at~~f~~~--------~~i~g~G~~g~Vy~~~~--~~---~~vAiK~l~~~~~---~~~~~~Ei~il~~ 511 (808)
+..++++|-..|...|... .++||.|.||.||+|++ .| ..||||.|+.... ..+|+.|+.||.+
T Consensus 607 iDP~TYEDPnqAvreFakEId~s~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQ 686 (996)
T KOG0196|consen 607 IDPHTYEDPNQAVREFAKEIDPSCVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQ 686 (996)
T ss_pred cCCccccCccHHHHHhhhhcChhheEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhccc
Confidence 3456777766666655433 46889999999999999 33 6799999995443 4679999999999
Q ss_pred cCCCCccceeecccc--ceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEe
Q 003594 512 VRHPHLVAVMGCCSE--LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVH 589 (808)
Q Consensus 512 l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiH 589 (808)
++||||++|.|+... ..+||.|||+||+|..+|+. +.+.+++.+...++++|+.|+.||-+ .++||
T Consensus 687 FdHPNIIrLEGVVTks~PvMIiTEyMENGsLDsFLR~---------~DGqftviQLVgMLrGIAsGMkYLsd---m~YVH 754 (996)
T KOG0196|consen 687 FDHPNIIRLEGVVTKSKPVMIITEYMENGSLDSFLRQ---------NDGQFTVIQLVGMLRGIASGMKYLSD---MNYVH 754 (996)
T ss_pred CCCCcEEEEEEEEecCceeEEEhhhhhCCcHHHHHhh---------cCCceEeehHHHHHHHHHHHhHHHhh---cCchh
Confidence 999999999999865 78999999999999999974 34669999999999999999999999 56999
Q ss_pred cCCCCCCcccCCCccEEEEeCCCccc----------------------------CCCCcchhhHhHHHHHHHHHc-CCCC
Q 003594 590 GSLTPSSILLDRNLVAKISGLGLNIC----------------------------DQLNVRSDIRAFGTLLLHLLT-GRNW 640 (808)
Q Consensus 590 rDLKp~NILld~~~~~kl~DfGla~~----------------------------~~~t~ksDVwS~Gvil~ellt-G~~P 640 (808)
|||...|||++.|..+|++|||+++. ..+|.+||||||||+|||.++ |..|
T Consensus 755 RDLAARNILVNsnLvCKVsDFGLSRvledd~~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERP 834 (996)
T KOG0196|consen 755 RDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 834 (996)
T ss_pred hhhhhhheeeccceEEEeccccceeecccCCCccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCc
Confidence 99999999999999999999999965 347899999999999999887 8888
Q ss_pred chhhHHHhhhcHHHHHHHhccCCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHHHHhcccc
Q 003594 641 AGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVRKKADGL 711 (808)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~~~~~~~ 711 (808)
|-.. .+++.+..+-++.+.+.|.+|+..|.+|++.||++| -..||.+.+|+..|++|.+....+
T Consensus 835 YWdm-----SNQdVIkaIe~gyRLPpPmDCP~aL~qLMldCWqkd--R~~RP~F~qiV~~lDklIrnP~SL 898 (996)
T KOG0196|consen 835 YWDM-----SNQDVIKAIEQGYRLPPPMDCPAALYQLMLDCWQKD--RNRRPKFAQIVSTLDKLIRNPNSL 898 (996)
T ss_pred cccc-----chHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHH--hhcCCCHHHHHHHHHHHhcCchhh
Confidence 7543 456677788888899999999999999999999999 889999999999999998765544
No 22
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3e-35 Score=317.19 Aligned_cols=217 Identities=22% Similarity=0.319 Sum_probs=174.0
Q ss_pred cccccccCCceEEEEEEE--CCeEEEEEEccC----CCCHHHHHHHHHHHhccCCCCccceeecccc----ceEEEEeec
Q 003594 466 RFRLKCAGDWTNVYRGRL--NHASVAIKTLNN----GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE----LKCIVFEYM 535 (808)
Q Consensus 466 ~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~----~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~----~~~lV~Ey~ 535 (808)
.+..+|+|+||.||++++ +|+.||+|++.- ........+||.||++|+||||++|.+...+ .+|||+|||
T Consensus 121 ki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYlVFeYM 200 (560)
T KOG0600|consen 121 KIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYLVFEYM 200 (560)
T ss_pred HHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEEEEecc
Confidence 345678999999999998 789999999982 2334567899999999999999999998754 789999999
Q ss_pred CCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc
Q 003594 536 PNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC 615 (808)
Q Consensus 536 ~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~ 615 (808)
+. +|.-++. ...-.++..++..|+.||+.||.|+|+ ++|+|||||.+|||||.+|.+||+|||||+.
T Consensus 201 dh-DL~GLl~---------~p~vkft~~qIKc~mkQLl~Gl~~cH~---~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~ 267 (560)
T KOG0600|consen 201 DH-DLSGLLS---------SPGVKFTEPQIKCYMKQLLEGLEYCHS---RGVLHRDIKGSNILIDNNGVLKIADFGLARF 267 (560)
T ss_pred cc-hhhhhhc---------CCCcccChHHHHHHHHHHHHHHHHHhh---cCeeeccccccceEEcCCCCEEeccccceee
Confidence 84 8888884 345679999999999999999999999 6799999999999999999999999999974
Q ss_pred ---------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhc-cCCCCCC
Q 003594 616 ---------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLD-GNAGIWP 667 (808)
Q Consensus 616 ---------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld-~~~~~~p 667 (808)
..|++.+|+||.||||.||++|+|.|....+...+ ..+..+.- +....|+
T Consensus 268 y~~~~~~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl--~kIfklcGSP~e~~W~ 345 (560)
T KOG0600|consen 268 YTPSGSAPYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQL--HKIFKLCGSPTEDYWP 345 (560)
T ss_pred ccCCCCcccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHH--HHHHHHhCCCChhccc
Confidence 35899999999999999999999988643221000 00011100 0000111
Q ss_pred ------------------------hhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 668 ------------------------LDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 668 ------------------------~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
...+....+|+..+|..| |..|.|+.+++.
T Consensus 346 ~~kLP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ld--P~kR~tA~~aL~ 399 (560)
T KOG0600|consen 346 VSKLPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLD--PDKRGTASSALQ 399 (560)
T ss_pred cccCCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccC--ccccccHHHHhc
Confidence 134567889999999999 999999888774
No 23
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=6.6e-35 Score=309.34 Aligned_cols=216 Identities=31% Similarity=0.521 Sum_probs=178.3
Q ss_pred cccccCCceEEEEEEEC------CeEEEEEEccCCCC---HHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecC
Q 003594 468 RLKCAGDWTNVYRGRLN------HASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMP 536 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~~------~~~vAiK~l~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~ 536 (808)
+.+|.|.||.||+|.+. +..|+||.++.... .+.|.+|+.++++++||||++++|+|.+ ..++||||++
T Consensus 5 ~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~~~ 84 (259)
T PF07714_consen 5 KQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEYCP 84 (259)
T ss_dssp EEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE--T
T ss_pred eEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccccc
Confidence 45789999999999996 58899999974433 4689999999999999999999999974 6899999999
Q ss_pred CCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-
Q 003594 537 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC- 615 (808)
Q Consensus 537 ~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~- 615 (808)
+|+|.++|... ....+++..++.|+.||+.||.|||+ .+|+|+||+|+|||++.++.+||+|||++..
T Consensus 85 ~g~L~~~L~~~--------~~~~~~~~~~~~i~~~i~~~l~~Lh~---~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~ 153 (259)
T PF07714_consen 85 GGSLDDYLKSK--------NKEPLSEQQRLSIAIQIAEALSYLHS---NNIIHGNLSPSNILLDSNGQVKLSDFGLSRPI 153 (259)
T ss_dssp TEBHHHHHHHT--------CTTTSBHHHHHHHHHHHHHHHHHHHH---TTEEEST-SGGGEEEETTTEEEEESTTTGEET
T ss_pred ccccccccccc--------cccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccc
Confidence 99999999643 24679999999999999999999999 5699999999999999999999999998753
Q ss_pred --------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCCCCCCh
Q 003594 616 --------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNAGIWPL 668 (808)
Q Consensus 616 --------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~ 668 (808)
..++.++||||||+++|||++ |+.||... ........+.+......+.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~-----~~~~~~~~~~~~~~~~~~~ 228 (259)
T PF07714_consen 154 SEKSKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDY-----DNEEIIEKLKQGQRLPIPD 228 (259)
T ss_dssp TTSSSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTS-----CHHHHHHHHHTTEETTSBT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccc-----ccccccccccccccceecc
Confidence 236789999999999999999 77887643 1223344455555566677
Q ss_pred hhHHHHHHHHHHhhccCCCcCccccHHhhHHHH
Q 003594 669 DLAEELAGIALKCLSADQDANRDLRIAGVMKEL 701 (808)
Q Consensus 669 ~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L 701 (808)
.++..+.+++.+||..+ |..||++.++++.|
T Consensus 229 ~~~~~~~~li~~C~~~~--p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 229 NCPKDIYSLIQQCWSHD--PEKRPSFQEILQEL 259 (259)
T ss_dssp TSBHHHHHHHHHHT-SS--GGGS--HHHHHHHH
T ss_pred chhHHHHHHHHHHcCCC--hhhCcCHHHHHhcC
Confidence 78999999999999999 99999999999876
No 24
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=2.3e-34 Score=306.08 Aligned_cols=219 Identities=25% Similarity=0.340 Sum_probs=181.7
Q ss_pred ccccccCCceEEEEEEEC-----CeEEEEEEccCCCC---HHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecC
Q 003594 467 FRLKCAGDWTNVYRGRLN-----HASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMP 536 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~~-----~~~vAiK~l~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~ 536 (808)
..++|+|+||.||+|.+. +..||+|.++.... ...|.+|+.++.+++||||++++|++.. ..++||||++
T Consensus 10 ~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 89 (266)
T cd05064 10 ERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIVTEYMS 89 (266)
T ss_pred eeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEEEEeCC
Confidence 356789999999999862 46899999984433 3578899999999999999999999855 7899999999
Q ss_pred CCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-
Q 003594 537 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC- 615 (808)
Q Consensus 537 ~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~- 615 (808)
+|+|.+++.. ....++|..++.++.||+.||+|||+ .+++||||||+|||++.++.+|++|||.+..
T Consensus 90 ~~~L~~~l~~---------~~~~l~~~~~~~~~~~i~~al~~lH~---~~iiH~dikp~nili~~~~~~~l~dfg~~~~~ 157 (266)
T cd05064 90 NGALDSFLRK---------HEGQLVAGQLMGMLPGLASGMKYLSE---MGYVHKGLAAHKVLVNSDLVCKISGFRRLQED 157 (266)
T ss_pred CCcHHHHHHh---------CCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeeccccHhhEEEcCCCcEEECCCcccccc
Confidence 9999999953 23468999999999999999999999 6699999999999999999999999997532
Q ss_pred -------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCCCCCChh
Q 003594 616 -------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLD 669 (808)
Q Consensus 616 -------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~ 669 (808)
..++.++|||||||++|||++ |.+||..... ......+.+....+.|..
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~ 232 (266)
T cd05064 158 KSEAIYTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSG-----QDVIKAVEDGFRLPAPRN 232 (266)
T ss_pred cccchhcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCH-----HHHHHHHHCCCCCCCCCC
Confidence 235678999999999999875 9999864321 122333333344455677
Q ss_pred hHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHH
Q 003594 670 LAEELAGIALKCLSADQDANRDLRIAGVMKELDEV 704 (808)
Q Consensus 670 ~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l 704 (808)
++..+.+++.+||+.+ |..||++.++++.|.++
T Consensus 233 ~~~~~~~li~~c~~~~--p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 233 CPNLLHQLMLDCWQKE--RGERPRFSQIHSILSKM 265 (266)
T ss_pred CCHHHHHHHHHHcCCC--chhCCCHHHHHHHHHhh
Confidence 8899999999999999 99999999999988764
No 25
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1.8e-34 Score=315.05 Aligned_cols=222 Identities=20% Similarity=0.364 Sum_probs=183.1
Q ss_pred ccccccCCceEEEEEEE--CCe----EEEEEEccCCC---CHHHHHHHHHHHhccCCCCccceeecccc-ceEEEEeecC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHA----SVAIKTLNNGL---SEEDFQAKVSFLTAVRHPHLVAVMGCCSE-LKCIVFEYMP 536 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~----~vAiK~l~~~~---~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-~~~lV~Ey~~ 536 (808)
.+.+|+|+||.||+|.+ ++. .||||++.... ....+.+|+.+++.++||||++++|+|.. ..++|++|++
T Consensus 12 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~~~~~v~e~~~ 91 (316)
T cd05108 12 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQLMP 91 (316)
T ss_pred eeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCCCceeeeecCC
Confidence 45678999999999987 343 49999987332 24678899999999999999999999866 6789999999
Q ss_pred CCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-
Q 003594 537 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC- 615 (808)
Q Consensus 537 ~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~- 615 (808)
+|+|.+++... ...+++..++.++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 92 ~g~l~~~l~~~---------~~~~~~~~~~~~~~qi~~~L~~LH~---~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~ 159 (316)
T cd05108 92 FGCLLDYVREH---------KDNIGSQYLLNWCVQIAKGMNYLEE---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (316)
T ss_pred CCCHHHHHHhc---------cccCCHHHHHHHHHHHHHHHHHHHh---cCeeccccchhheEecCCCcEEEccccccccc
Confidence 99999999532 3468999999999999999999999 6699999999999999999999999999853
Q ss_pred --------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhc-cCCCCCC
Q 003594 616 --------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLD-GNAGIWP 667 (808)
Q Consensus 616 --------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld-~~~~~~p 667 (808)
..++.++|||||||++|||++ |.+||..... ..+..++. ......+
T Consensus 160 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~------~~~~~~~~~~~~~~~~ 233 (316)
T cd05108 160 GADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA------SEISSILEKGERLPQP 233 (316)
T ss_pred cCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH------HHHHHHHhCCCCCCCC
Confidence 235678999999999999998 9999865321 11222222 2334445
Q ss_pred hhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHHHHhc
Q 003594 668 LDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVRKKA 708 (808)
Q Consensus 668 ~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~~~~ 708 (808)
..++..+.+++.+||..+ |..||++.+++..|..+.+..
T Consensus 234 ~~~~~~~~~li~~cl~~~--p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 234 PICTIDVYMIMVKCWMID--ADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred CCCCHHHHHHHHHHccCC--hhhCcCHHHHHHHHHHHHcCC
Confidence 667889999999999999 999999999999998886544
No 26
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=7.1e-35 Score=319.45 Aligned_cols=210 Identities=22% Similarity=0.267 Sum_probs=175.6
Q ss_pred ccccCCceEEEEEEE--CCeEEEEEEccCC-----CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCC
Q 003594 469 LKCAGDWTNVYRGRL--NHASVAIKTLNNG-----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGN 539 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gs 539 (808)
++|+|+||.||++.. +|+.||||++... .....+.+|+.++.+++||||+++++++.+ ..||||||+++|+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~~ 81 (323)
T cd05571 2 LLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGGE 81 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCCc
Confidence 578999999999997 6789999998732 123567889999999999999999998865 7899999999999
Q ss_pred HHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc----
Q 003594 540 LRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC---- 615 (808)
Q Consensus 540 L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~---- 615 (808)
|.+++. ....+++..+..|+.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 82 L~~~l~----------~~~~~~~~~~~~~~~qi~~~L~~lH~---~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~ 148 (323)
T cd05571 82 LFFHLS----------RERVFSEDRARFYGAEIVSALGYLHS---CDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISD 148 (323)
T ss_pred HHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccC
Confidence 999994 44578999999999999999999999 5699999999999999999999999998752
Q ss_pred ---------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHHH
Q 003594 616 ---------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEEL 674 (808)
Q Consensus 616 ---------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l 674 (808)
..++.++|||||||++|||+||++||.... .......+......+|...+.++
T Consensus 149 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~------~~~~~~~~~~~~~~~p~~~~~~~ 222 (323)
T cd05571 149 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD------HEKLFELILMEEIRFPRTLSPEA 222 (323)
T ss_pred CCcccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCC------HHHHHHHHHcCCCCCCCCCCHHH
Confidence 236789999999999999999999996422 12222222233445677788999
Q ss_pred HHHHHHhhccCCCcCccc-----cHHhhHH
Q 003594 675 AGIALKCLSADQDANRDL-----RIAGVMK 699 (808)
Q Consensus 675 ~~Li~~Cl~~dp~p~~Rp-----s~~evl~ 699 (808)
.+|+.+||+.| |..|| ++.++++
T Consensus 223 ~~li~~~L~~d--P~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 223 KSLLAGLLKKD--PKQRLGGGPEDAKEIME 250 (323)
T ss_pred HHHHHHHccCC--HHHcCCCCCCCHHHHHc
Confidence 99999999999 99999 6666653
No 27
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-35 Score=318.78 Aligned_cols=232 Identities=22% Similarity=0.413 Sum_probs=199.4
Q ss_pred HHHHHhhccccccccccccCCceEEEEEEEC--CeEEEEEEcc-CCCCHHHHHHHHHHHhccCCCCccceeecccc--ce
Q 003594 454 EDIRLATEDFSERFRLKCAGDWTNVYRGRLN--HASVAIKTLN-NGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LK 528 (808)
Q Consensus 454 ~ei~~at~~f~~~~~i~g~G~~g~Vy~~~~~--~~~vAiK~l~-~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~ 528 (808)
++++....+..-..+++ +|.||.||.|.|. ...||||.++ +....++|+.|+.+|+.|+|||+|+|+|+|.. .+
T Consensus 260 DkWEmeRtdItMkhKLG-GGQYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPF 338 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLG-GGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPF 338 (1157)
T ss_pred chhhccchheeeeeccC-CCcccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCe
Confidence 44444445555556665 6889999999994 5789999999 44556899999999999999999999999965 78
Q ss_pred EEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEE
Q 003594 529 CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKIS 608 (808)
Q Consensus 529 ~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~ 608 (808)
|||+|||.+|+|.+||... +...++--..+.++.||++|+.||.. +++|||||-..|+|+.+|..+||+
T Consensus 339 YIiTEfM~yGNLLdYLRec--------nr~ev~avvLlyMAtQIsSaMeYLEk---knFIHRDLAARNCLVgEnhiVKvA 407 (1157)
T KOG4278|consen 339 YIITEFMCYGNLLDYLREC--------NRSEVPAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHIVKVA 407 (1157)
T ss_pred EEEEecccCccHHHHHHHh--------chhhcchhHHHHHHHHHHHHHHHHHH---hhhhhhhhhhhhccccccceEEee
Confidence 9999999999999999764 44567777888999999999999999 779999999999999999999999
Q ss_pred eCCCccc--------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhc-
Q 003594 609 GLGLNIC--------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLD- 660 (808)
Q Consensus 609 DfGla~~--------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld- 660 (808)
|||+++. ..++.|+|||+|||+|||+.| |-.||.. ++...+..++.
T Consensus 408 DFGLsRlMtgDTYTAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPG------idlSqVY~LLEk 481 (1157)
T KOG4278|consen 408 DFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPG------IDLSQVYGLLEK 481 (1157)
T ss_pred ccchhhhhcCCceecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCC------ccHHHHHHHHhc
Confidence 9999975 346789999999999999998 8888866 44455566665
Q ss_pred cCCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHHH
Q 003594 661 GNAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVR 705 (808)
Q Consensus 661 ~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~ 705 (808)
+.+.+.|..|++.+.+|+..||+.+ |.+||++.++.+.|+.|-
T Consensus 482 gyRM~~PeGCPpkVYeLMraCW~Ws--PsDRPsFaeiHqafEtmf 524 (1157)
T KOG4278|consen 482 GYRMDGPEGCPPKVYELMRACWNWS--PSDRPSFAEIHQAFETMF 524 (1157)
T ss_pred cccccCCCCCCHHHHHHHHHHhcCC--cccCccHHHHHHHHHHHh
Confidence 4778889999999999999999999 999999999999998764
No 28
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-35 Score=326.09 Aligned_cols=224 Identities=23% Similarity=0.417 Sum_probs=192.0
Q ss_pred cccccCCceEEEEEEE--C-C---eEEEEEEccC-C-C---CHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEee
Q 003594 468 RLKCAGDWTNVYRGRL--N-H---ASVAIKTLNN-G-L---SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEY 534 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~-~---~~vAiK~l~~-~-~---~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey 534 (808)
+.+|+|+||.||+|.+ . + ..||||..+. . . ...+|.+|+++|++++|||||++||++.. +++||||+
T Consensus 163 kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~Pl~ivmEl 242 (474)
T KOG0194|consen 163 KKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEPLMLVMEL 242 (474)
T ss_pred ceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCccEEEEEe
Confidence 5678999999999998 2 2 2389999883 2 2 24689999999999999999999999855 88999999
Q ss_pred cCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCcc
Q 003594 535 MPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNI 614 (808)
Q Consensus 535 ~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~ 614 (808)
|+||+|.++|... ...++..++++++.+.|.||+|||+ +++|||||-..|+|++.++.+||+|||+++
T Consensus 243 ~~gGsL~~~L~k~---------~~~v~~~ek~~~~~~AA~Gl~YLh~---k~~IHRDIAARNcL~~~~~~vKISDFGLs~ 310 (474)
T KOG0194|consen 243 CNGGSLDDYLKKN---------KKSLPTLEKLRFCYDAARGLEYLHS---KNCIHRDIAARNCLYSKKGVVKISDFGLSR 310 (474)
T ss_pred cCCCcHHHHHHhC---------CCCCCHHHHHHHHHHHHhHHHHHHH---CCCcchhHhHHHheecCCCeEEeCcccccc
Confidence 9999999999532 3369999999999999999999999 669999999999999999999999999986
Q ss_pred c-------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHH-hccCCCCCC
Q 003594 615 C-------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQV-LDGNAGIWP 667 (808)
Q Consensus 615 ~-------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~-ld~~~~~~p 667 (808)
. ..+++++|||||||++||+++ |..||..... ......+ ..+.....|
T Consensus 311 ~~~~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~-----~~v~~kI~~~~~r~~~~ 385 (474)
T KOG0194|consen 311 AGSQYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKN-----YEVKAKIVKNGYRMPIP 385 (474)
T ss_pred CCcceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCH-----HHHHHHHHhcCccCCCC
Confidence 4 347899999999999999999 8888875422 2333444 446677788
Q ss_pred hhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHHHHhccc
Q 003594 668 LDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVRKKADG 710 (808)
Q Consensus 668 ~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~~~~~~ 710 (808)
...+..+..++.+||..+ |..||+|.++.+.|+.+......
T Consensus 386 ~~~p~~~~~~~~~c~~~~--p~~R~tm~~i~~~l~~~~~~~~~ 426 (474)
T KOG0194|consen 386 SKTPKELAKVMKQCWKKD--PEDRPTMSTIKKKLEALEKKKEA 426 (474)
T ss_pred CCCHHHHHHHHHHhccCC--hhhccCHHHHHHHHHHHHhcccc
Confidence 889999999999999999 99999999999999999876543
No 29
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-34 Score=316.90 Aligned_cols=221 Identities=24% Similarity=0.422 Sum_probs=194.4
Q ss_pred ccccccCCceEEEEEEEC----C--eEEEEEEccCC---CCHHHHHHHHHHHhccCCCCccceeecccc-ceEEEEeecC
Q 003594 467 FRLKCAGDWTNVYRGRLN----H--ASVAIKTLNNG---LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE-LKCIVFEYMP 536 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~~----~--~~vAiK~l~~~---~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-~~~lV~Ey~~ 536 (808)
.+++|.|-||.||+|.++ | -.||||..+.+ .+.+.|..|..+|++++|||||+|+|+|.+ ..|||||.++
T Consensus 394 ~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e~P~WivmEL~~ 473 (974)
T KOG4257|consen 394 KRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQPMWIVMELAP 473 (974)
T ss_pred HHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeeccceeEEEeccc
Confidence 357799999999999983 2 36999999843 335789999999999999999999999987 7899999999
Q ss_pred CCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-
Q 003594 537 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC- 615 (808)
Q Consensus 537 ~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~- 615 (808)
-|.|..+|. .+...|+......++.||+.||+|||+ +.+|||||-..|||+...-.+||+|||+++.
T Consensus 474 ~GELr~yLq---------~nk~sL~l~tL~ly~~Qi~talaYLeS---krfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ 541 (974)
T KOG4257|consen 474 LGELREYLQ---------QNKDSLPLRTLTLYCYQICTALAYLES---KRFVHRDIAARNILVSSPQCVKLADFGLSRYL 541 (974)
T ss_pred chhHHHHHH---------hccccchHHHHHHHHHHHHHHHHHHHh---hchhhhhhhhhheeecCcceeeecccchhhhc
Confidence 999999996 345678999999999999999999999 7799999999999999999999999999975
Q ss_pred -------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCCCCCChh
Q 003594 616 -------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLD 669 (808)
Q Consensus 616 -------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~ 669 (808)
..+|.+||||-|||.+||++. |..||..+.+ .+.+..+-.+.+.+.|+.
T Consensus 542 ed~~yYkaS~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkN-----sDVI~~iEnGeRlP~P~n 616 (974)
T KOG4257|consen 542 EDDAYYKASRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKN-----SDVIGHIENGERLPCPPN 616 (974)
T ss_pred cccchhhccccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccc-----cceEEEecCCCCCCCCCC
Confidence 347899999999999999987 9999987643 233344555678899999
Q ss_pred hHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHHHH
Q 003594 670 LAEELAGIALKCLSADQDANRDLRIAGVMKELDEVRK 706 (808)
Q Consensus 670 ~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~~ 706 (808)
|++.+..|+.+||.++ |.+||.+.++...|..+..
T Consensus 617 CPp~LYslmskcWaye--P~kRPrftei~~~lsdv~q 651 (974)
T KOG4257|consen 617 CPPALYSLMSKCWAYE--PSKRPRFTEIKAILSDVLQ 651 (974)
T ss_pred CChHHHHHHHHHhccC--cccCCcHHHHHHHHHHHHH
Confidence 9999999999999999 9999999999999988875
No 30
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1.9e-34 Score=288.86 Aligned_cols=219 Identities=20% Similarity=0.297 Sum_probs=176.7
Q ss_pred cccccccCCceEEEEEEE--CCeEEEEEEccCC----CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCC
Q 003594 466 RFRLKCAGDWTNVYRGRL--NHASVAIKTLNNG----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPN 537 (808)
Q Consensus 466 ~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~ 537 (808)
..+.+|+|.||.||+|.+ +|+.||||+++.. .-.-...+|+..|+.++||||+.++++|.. ...||+|||+
T Consensus 6 ~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfEfm~- 84 (318)
T KOG0659|consen 6 KLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFEFMP- 84 (318)
T ss_pred hhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEEecc-
Confidence 345678999999999998 6899999999832 223567899999999999999999999976 7889999997
Q ss_pred CCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--
Q 003594 538 GNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-- 615 (808)
Q Consensus 538 gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-- 615 (808)
.+|+..++ .....++..++..++.++++||+|||. +.|+||||||.|+|++.+|.+||+|||+|+.
T Consensus 85 tdLe~vIk---------d~~i~l~pa~iK~y~~m~LkGl~y~H~---~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~ 152 (318)
T KOG0659|consen 85 TDLEVVIK---------DKNIILSPADIKSYMLMTLKGLAYCHS---KWILHRDLKPNNLLISSDGQLKIADFGLARFFG 152 (318)
T ss_pred ccHHHHhc---------ccccccCHHHHHHHHHHHHHHHHHHHh---hhhhcccCCccceEEcCCCcEEeecccchhccC
Confidence 79999996 456789999999999999999999999 5599999999999999999999999999975
Q ss_pred ------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCC-----
Q 003594 616 ------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIW----- 666 (808)
Q Consensus 616 ------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~----- 666 (808)
..|+..+||||.|||+.||+-|.|-|....+.... ...+..+-.+....|
T Consensus 153 ~p~~~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL-~~If~~LGTP~~~~WP~~~~ 231 (318)
T KOG0659|consen 153 SPNRIQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQL-SKIFRALGTPTPDQWPEMTS 231 (318)
T ss_pred CCCcccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHH-HHHHHHcCCCCcccCccccc
Confidence 35889999999999999999999876532211000 000111111111112
Q ss_pred ------------------ChhhHHHHHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 667 ------------------PLDLAEELAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 667 ------------------p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
-...+.++.+|+.++|.+| |..|+++.|++++
T Consensus 232 lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~yn--P~~Rita~qaL~~ 281 (318)
T KOG0659|consen 232 LPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYN--PKKRITASQALKH 281 (318)
T ss_pred cccHHHHhcCCCCccccccccccHHHHHHHHhhhccC--chhcccHHHHhcc
Confidence 2245678899999999999 9999999998754
No 31
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-35 Score=294.86 Aligned_cols=205 Identities=26% Similarity=0.335 Sum_probs=177.9
Q ss_pred cccccccCCceEEEEEEE--CCeEEEEEEccCC-----CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecC
Q 003594 466 RFRLKCAGDWTNVYRGRL--NHASVAIKTLNNG-----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMP 536 (808)
Q Consensus 466 ~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~ 536 (808)
..+.+|.|+||.|.+++. +|..+|+|++... ...+...+|..+|+.+.||+++++++.|.+ ..||||||++
T Consensus 48 ~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvmeyv~ 127 (355)
T KOG0616|consen 48 RLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVMEYVP 127 (355)
T ss_pred heeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEEeccC
Confidence 346778999999999998 6889999999832 234678899999999999999999999976 7899999999
Q ss_pred CCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-
Q 003594 537 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC- 615 (808)
Q Consensus 537 ~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~- 615 (808)
||.|..+|+ ..+.+++..+..++.||+.||+|||+ ..|++|||||+|||||.+|.+||+|||+|+.
T Consensus 128 GGElFS~Lr----------k~~rF~e~~arFYAAeivlAleylH~---~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v 194 (355)
T KOG0616|consen 128 GGELFSYLR----------KSGRFSEPHARFYAAEIVLALEYLHS---LDIIYRDLKPENLLLDQNGHIKITDFGFAKRV 194 (355)
T ss_pred CccHHHHHH----------hcCCCCchhHHHHHHHHHHHHHHHHh---cCeeeccCChHHeeeccCCcEEEEeccceEEe
Confidence 999999994 55679999999999999999999999 5699999999999999999999999999964
Q ss_pred ---------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHHH
Q 003594 616 ---------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEEL 674 (808)
Q Consensus 616 ---------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l 674 (808)
..|+..+|.|||||++|||+.|.+||..... ...+..++.+ ...+|...+.++
T Consensus 195 ~~rT~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~-----~~iY~KI~~~-~v~fP~~fs~~~ 268 (355)
T KOG0616|consen 195 SGRTWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP-----IQIYEKILEG-KVKFPSYFSSDA 268 (355)
T ss_pred cCcEEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh-----HHHHHHHHhC-cccCCcccCHHH
Confidence 4688999999999999999999999986322 2344455543 456888999999
Q ss_pred HHHHHHhhccCCCcCcc
Q 003594 675 AGIALKCLSADQDANRD 691 (808)
Q Consensus 675 ~~Li~~Cl~~dp~p~~R 691 (808)
.+|+...|+.| -..|
T Consensus 269 kdLl~~LL~vD--~t~R 283 (355)
T KOG0616|consen 269 KDLLKKLLQVD--LTKR 283 (355)
T ss_pred HHHHHHHHhhh--hHhh
Confidence 99999999999 5566
No 32
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.1e-34 Score=317.24 Aligned_cols=223 Identities=25% Similarity=0.316 Sum_probs=186.2
Q ss_pred cccccccccccCCceEEEEEEE--CCeEEEEEEccCC-------CCHHHHHHHHHHHhccC-CCCccceeecccc--ceE
Q 003594 462 DFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNG-------LSEEDFQAKVSFLTAVR-HPHLVAVMGCCSE--LKC 529 (808)
Q Consensus 462 ~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-------~~~~~~~~Ei~il~~l~-HpnIv~l~g~~~~--~~~ 529 (808)
+.+...+.+|.|+||.||.|.. +|..||||++... ...+.+.+|+.+++.++ ||||++++.++.. ..|
T Consensus 17 g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~~~~ 96 (370)
T KOG0583|consen 17 GKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPTKIY 96 (370)
T ss_pred CceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCCeEE
Confidence 3444556789999999999988 6899999977632 12456778999999999 9999999999855 789
Q ss_pred EEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCC-ccEEEE
Q 003594 530 IVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRN-LVAKIS 608 (808)
Q Consensus 530 lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~-~~~kl~ 608 (808)
+||||+.||+|.+++. ....+.+..+.+++.|+++|++|+|+ ++|+||||||+|||||.+ +.+||+
T Consensus 97 ivmEy~~gGdL~~~i~----------~~g~l~E~~ar~~F~Qlisav~y~H~---~gi~HRDLK~ENilld~~~~~~Kl~ 163 (370)
T KOG0583|consen 97 IVMEYCSGGDLFDYIV----------NKGRLKEDEARKYFRQLISAVAYCHS---RGIVHRDLKPENILLDGNEGNLKLS 163 (370)
T ss_pred EEEEecCCccHHHHHH----------HcCCCChHHHHHHHHHHHHHHHHHHh---CCEeeCCCCHHHEEecCCCCCEEEe
Confidence 9999999999999994 45778999999999999999999999 669999999999999999 999999
Q ss_pred eCCCccc-------------------------CC-C-CcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhcc
Q 003594 609 GLGLNIC-------------------------DQ-L-NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDG 661 (808)
Q Consensus 609 DfGla~~-------------------------~~-~-t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~ 661 (808)
|||++.. .. | +.++||||+||+||.|++|+.||.... ...+...+..
T Consensus 164 DFG~s~~~~~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~------~~~l~~ki~~ 237 (370)
T KOG0583|consen 164 DFGLSAISPGEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSN------VPNLYRKIRK 237 (370)
T ss_pred ccccccccCCCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCcc------HHHHHHHHhc
Confidence 9999853 11 3 588999999999999999999998632 1222222444
Q ss_pred CCCCCChhh-HHHHHHHHHHhhccCCCcCccccHHhhHHHHHHHHH
Q 003594 662 NAGIWPLDL-AEELAGIALKCLSADQDANRDLRIAGVMKELDEVRK 706 (808)
Q Consensus 662 ~~~~~p~~~-~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~~ 706 (808)
....+|..+ +.++..|+.+||..| |..|+++.+|+ .-..++.
T Consensus 238 ~~~~~p~~~~S~~~~~Li~~mL~~~--P~~R~t~~~i~-~h~w~~~ 280 (370)
T KOG0583|consen 238 GEFKIPSYLLSPEARSLIEKMLVPD--PSTRITLLEIL-EHPWFQK 280 (370)
T ss_pred CCccCCCCcCCHHHHHHHHHHcCCC--cccCCCHHHHh-hChhhcc
Confidence 455667667 999999999999999 88999999999 5555554
No 33
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=2.1e-34 Score=310.77 Aligned_cols=212 Identities=23% Similarity=0.272 Sum_probs=175.9
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccCC-----CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNNG-----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPN 537 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~ 537 (808)
.+.+|.|+||.||+|.. +|+.||||++... .....+.+|+.++++++||||+++++++.+ ..++||||+++
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 85 (291)
T cd05612 6 IKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLMEYVPG 85 (291)
T ss_pred eeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEEeCCCC
Confidence 35678999999999998 4899999998621 223568899999999999999999999865 78999999999
Q ss_pred CCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--
Q 003594 538 GNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-- 615 (808)
Q Consensus 538 gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-- 615 (808)
|+|.+++. ....+++..+..|+.||+.||.|||+ .+|+||||||+|||++.++.+||+|||++..
T Consensus 86 ~~L~~~~~----------~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~ 152 (291)
T cd05612 86 GELFSYLR----------NSGRFSNSTGLFYASEIVCALEYLHS---KEIVYRDLKPENILLDKEGHIKLTDFGFAKKLR 152 (291)
T ss_pred CCHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEEecCcchhcc
Confidence 99999994 34568999999999999999999999 5699999999999999999999999998753
Q ss_pred --------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHHHH
Q 003594 616 --------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELA 675 (808)
Q Consensus 616 --------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~ 675 (808)
..++.++|||||||++|+|++|++||..... ......+.. ....+|...+..+.
T Consensus 153 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~-----~~~~~~i~~-~~~~~~~~~~~~~~ 226 (291)
T cd05612 153 DRTWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNP-----FGIYEKILA-GKLEFPRHLDLYAK 226 (291)
T ss_pred CCcccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHh-CCcCCCccCCHHHH
Confidence 2367889999999999999999999865321 122222322 33456667788999
Q ss_pred HHHHHhhccCCCcCcccc-----HHhhHH
Q 003594 676 GIALKCLSADQDANRDLR-----IAGVMK 699 (808)
Q Consensus 676 ~Li~~Cl~~dp~p~~Rps-----~~evl~ 699 (808)
+|+.+||+.| |..||+ +.+++.
T Consensus 227 ~li~~~l~~d--p~~R~~~~~~~~~~~l~ 253 (291)
T cd05612 227 DLIKKLLVVD--RTRRLGNMKNGADDVKN 253 (291)
T ss_pred HHHHHHcCCC--HHHccCCccCCHHHHhc
Confidence 9999999999 999995 566553
No 34
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=3e-34 Score=308.56 Aligned_cols=218 Identities=21% Similarity=0.315 Sum_probs=176.5
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccCC-----CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNNG-----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPN 537 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~ 537 (808)
.+++|.|+||.||+|.+ +|+.||+|.+... .....+.+|+.++.+++||||++++++|.+ ..++||||+++
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~~~~ 84 (285)
T cd05631 5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTIMNG 84 (285)
T ss_pred EEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEecCC
Confidence 46678999999999997 6899999998621 223467899999999999999999998855 78999999999
Q ss_pred CCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--
Q 003594 538 GNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-- 615 (808)
Q Consensus 538 gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-- 615 (808)
|+|.+++... ....+++..+..++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||++..
T Consensus 85 g~L~~~~~~~--------~~~~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~ 153 (285)
T cd05631 85 GDLKFHIYNM--------GNPGFDEQRAIFYAAELCCGLEDLQR---ERIVYRDLKPENILLDDRGHIRISDLGLAVQIP 153 (285)
T ss_pred CcHHHHHHhh--------CCCCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcC
Confidence 9999888532 23468999999999999999999999 6699999999999999999999999999742
Q ss_pred ----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHH
Q 003594 616 ----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEE 673 (808)
Q Consensus 616 ----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~ 673 (808)
..++.++|||||||++|+|++|++||...... .....+...+......++...+..
T Consensus 154 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~s~~ 231 (285)
T cd05631 154 EGETVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKER--VKREEVDRRVKEDQEEYSEKFSED 231 (285)
T ss_pred CCCeecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcc--hhHHHHHHHhhcccccCCccCCHH
Confidence 24678999999999999999999999753211 011112222222334456678899
Q ss_pred HHHHHHHhhccCCCcCcccc-----HHhhHH
Q 003594 674 LAGIALKCLSADQDANRDLR-----IAGVMK 699 (808)
Q Consensus 674 l~~Li~~Cl~~dp~p~~Rps-----~~evl~ 699 (808)
+.+|+.+||+.| |..||+ +.++++
T Consensus 232 ~~~li~~~l~~~--P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 232 AKSICRMLLTKN--PKERLGCRGNGAAGVKQ 260 (285)
T ss_pred HHHHHHHHhhcC--HHHhcCCCCCCHHHHhc
Confidence 999999999999 999997 566654
No 35
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=6e-34 Score=300.96 Aligned_cols=215 Identities=21% Similarity=0.339 Sum_probs=179.7
Q ss_pred ccccCCceEEEEEEE----CCeEEEEEEccCCC----CHHHHHHHHHHHhccCCCCccceeecccc-ceEEEEeecCCCC
Q 003594 469 LKCAGDWTNVYRGRL----NHASVAIKTLNNGL----SEEDFQAKVSFLTAVRHPHLVAVMGCCSE-LKCIVFEYMPNGN 539 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~----~~~~vAiK~l~~~~----~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-~~~lV~Ey~~~gs 539 (808)
.+|+|+||.||+|.+ ++..||+|++.... ..+.+.+|+.++..++||||++++|++.+ ..++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~~~~~~ 81 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEAESWMLVMELAELGP 81 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCcEEEEecCCCCc
Confidence 358899999999976 46889999987322 23578999999999999999999999865 7789999999999
Q ss_pred HHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc----
Q 003594 540 LRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC---- 615 (808)
Q Consensus 540 L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~---- 615 (808)
|.+++. ....+++..+..|+.|++.||.|||+ .+|+||||||+|||++.++.+||+|||++..
T Consensus 82 L~~~l~----------~~~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~ 148 (257)
T cd05116 82 LNKFLQ----------KNKHVTEKNITELVHQVSMGMKYLEE---TNFVHRDLAARNVLLVTQHYAKISDFGLSKALGAD 148 (257)
T ss_pred HHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchhhEEEcCCCeEEECCCccccccCCC
Confidence 999994 33568999999999999999999999 6699999999999999999999999998742
Q ss_pred ------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCCCCCChhh
Q 003594 616 ------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDL 670 (808)
Q Consensus 616 ------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~ 670 (808)
..++.++|||||||++|||++ |.+||..... ......+........|..+
T Consensus 149 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-----~~~~~~i~~~~~~~~~~~~ 223 (257)
T cd05116 149 ENYYKAKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG-----NEVTQMIESGERMECPQRC 223 (257)
T ss_pred CCeeeecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHCCCCCCCCCCC
Confidence 124568999999999999998 9999864311 1222223333445667788
Q ss_pred HHHHHHHHHHhhccCCCcCccccHHhhHHHHHH
Q 003594 671 AEELAGIALKCLSADQDANRDLRIAGVMKELDE 703 (808)
Q Consensus 671 ~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~ 703 (808)
+.++.+||.+||+.| |..||++.+|...|+.
T Consensus 224 ~~~l~~li~~~~~~~--p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 224 PPEMYDLMKLCWTYG--VDERPGFAVVELRLRN 254 (257)
T ss_pred CHHHHHHHHHHhccC--chhCcCHHHHHHHHhc
Confidence 999999999999999 9999999999998875
No 36
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=2.2e-34 Score=315.62 Aligned_cols=210 Identities=23% Similarity=0.276 Sum_probs=174.1
Q ss_pred ccccCCceEEEEEEE--CCeEEEEEEccCC-----CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCC
Q 003594 469 LKCAGDWTNVYRGRL--NHASVAIKTLNNG-----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGN 539 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gs 539 (808)
++|+|+||.||++.. +|..||+|++... .....+.+|+.++..++||||++++++|.. ..||||||+++|+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~~ 81 (323)
T cd05595 2 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGGE 81 (323)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCCc
Confidence 578999999999997 6799999999732 223567789999999999999999998865 7899999999999
Q ss_pred HHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc----
Q 003594 540 LRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC---- 615 (808)
Q Consensus 540 L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~---- 615 (808)
|..++. ....+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||++..
T Consensus 82 L~~~l~----------~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~ 148 (323)
T cd05595 82 LFFHLS----------RERVFTEERARFYGAEIVSALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISD 148 (323)
T ss_pred HHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEEcCCCCEEecccHHhccccCC
Confidence 999884 34578999999999999999999999 5699999999999999999999999998642
Q ss_pred ---------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHHH
Q 003594 616 ---------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEEL 674 (808)
Q Consensus 616 ---------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l 674 (808)
..++.++|||||||++|+|++|+.||..... ......+......+|..+++.+
T Consensus 149 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~------~~~~~~~~~~~~~~p~~~~~~~ 222 (323)
T cd05595 149 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH------ERLFELILMEEIRFPRTLSPEA 222 (323)
T ss_pred CCccccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCH------HHHHHHHhcCCCCCCCCCCHHH
Confidence 2357889999999999999999999864321 1112222223344667788999
Q ss_pred HHHHHHhhccCCCcCccc-----cHHhhHH
Q 003594 675 AGIALKCLSADQDANRDL-----RIAGVMK 699 (808)
Q Consensus 675 ~~Li~~Cl~~dp~p~~Rp-----s~~evl~ 699 (808)
.+|+.+||..| |..|| ++.++++
T Consensus 223 ~~li~~~L~~d--P~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 223 KSLLAGLLKKD--PKQRLGGGPSDAKEVME 250 (323)
T ss_pred HHHHHHHccCC--HHHhCCCCCCCHHHHHc
Confidence 99999999999 88998 6666654
No 37
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1.1e-33 Score=300.01 Aligned_cols=219 Identities=21% Similarity=0.394 Sum_probs=182.8
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCC-CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCHHH
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNG-LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNLRD 542 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL~~ 542 (808)
+.+|+|+||.||+|.+ ++..||+|.+... .....+.+|+.++..++||||++++++|.. ..++||||+++|+|.+
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 91 (263)
T cd05052 12 HKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 91 (263)
T ss_pred eecCCcccceEEEEEEecCCceEEEEEecCCchHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeCCCCcHHH
Confidence 3467899999999998 4789999998733 335679999999999999999999999855 7889999999999999
Q ss_pred HHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-------
Q 003594 543 KLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC------- 615 (808)
Q Consensus 543 ~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~------- 615 (808)
++... ....+++..++.++.|++.||.|||+ .+++||||||+|||++.++.+||+|||++..
T Consensus 92 ~~~~~--------~~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~ 160 (263)
T cd05052 92 YLREC--------NRQEVNAVVLLYMATQISSAMEYLEK---KNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 160 (263)
T ss_pred HHHhC--------CCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCcEEeCCCccccccccceee
Confidence 99532 23568999999999999999999999 5699999999999999999999999998743
Q ss_pred -------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHHHH
Q 003594 616 -------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELA 675 (808)
Q Consensus 616 -------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~ 675 (808)
..++.++|||||||++|||++ |.+||..... ......+........|..++..+.
T Consensus 161 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 235 (263)
T cd05052 161 AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL-----SQVYELLEKGYRMERPEGCPPKVY 235 (263)
T ss_pred ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHHHHCCCCCCCCCCCCHHHH
Confidence 234678999999999999998 9999864211 112222333344556677889999
Q ss_pred HHHHHhhccCCCcCccccHHhhHHHHHHH
Q 003594 676 GIALKCLSADQDANRDLRIAGVMKELDEV 704 (808)
Q Consensus 676 ~Li~~Cl~~dp~p~~Rps~~evl~~L~~l 704 (808)
+++.+||..+ |..||++.++++.|+.+
T Consensus 236 ~li~~cl~~~--p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 236 ELMRACWQWN--PSDRPSFAEIHQAFETM 262 (263)
T ss_pred HHHHHHccCC--cccCCCHHHHHHHHHhh
Confidence 9999999999 99999999999999865
No 38
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=5.2e-34 Score=327.82 Aligned_cols=222 Identities=20% Similarity=0.259 Sum_probs=186.5
Q ss_pred ccccccCCceEEEEEEE-CC-eEEEEEEccC--CCCHHHHHHHHHHHhccC-CCCccceeeccc-c--------ceEEEE
Q 003594 467 FRLKCAGDWTNVYRGRL-NH-ASVAIKTLNN--GLSEEDFQAKVSFLTAVR-HPHLVAVMGCCS-E--------LKCIVF 532 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~-~~-~~vAiK~l~~--~~~~~~~~~Ei~il~~l~-HpnIv~l~g~~~-~--------~~~lV~ 532 (808)
.+.+.+|||+.||.+.+ .+ ..||+|++-. ......+.+||++|++|. |||||.|++.+. . ..+|.|
T Consensus 42 ~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~EvllLm 121 (738)
T KOG1989|consen 42 EKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVWEVLLLM 121 (738)
T ss_pred EEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCceeEEEeeh
Confidence 45677899999999999 34 8999999873 333467889999999996 999999999431 1 467999
Q ss_pred eecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCC
Q 003594 533 EYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 612 (808)
Q Consensus 533 Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGl 612 (808)
|||.||+|-|++... ....|++.++++|+.|+|.|+++||... .+|||||||-+||||+.+|..||||||.
T Consensus 122 EyC~gg~Lvd~mn~R--------lq~~lte~eVLkIf~dv~~AVa~mH~~~-pPiIHRDLKiENvLls~~g~~KLCDFGS 192 (738)
T KOG1989|consen 122 EYCKGGSLVDFMNTR--------LQTRLTEDEVLKIFYDVCEAVAAMHYLK-PPIIHRDLKIENVLLSADGNYKLCDFGS 192 (738)
T ss_pred hhccCCcHHHHHHHH--------HhccCChHHHHHHHHHHHHHHHHHhcCC-CccchhhhhhhheEEcCCCCEEeCcccc
Confidence 999999999999754 2344999999999999999999999987 7899999999999999999999999999
Q ss_pred ccc-------------------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHH
Q 003594 613 NIC-------------------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTL 655 (808)
Q Consensus 613 a~~-------------------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~ 655 (808)
+.. ..+++|+|||+|||+||-|+....||+... .
T Consensus 193 att~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg---------~ 263 (738)
T KOG1989|consen 193 ATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESG---------K 263 (738)
T ss_pred cccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCc---------c
Confidence 843 246899999999999999999999997531 1
Q ss_pred HHHhccCC-CCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHHHHhc
Q 003594 656 MQVLDGNA-GIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVRKKA 708 (808)
Q Consensus 656 ~~~ld~~~-~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~~~~ 708 (808)
..|+++.. .+..+.++..+.+||..||+.| |..||++.+|+..+-+|....
T Consensus 264 laIlng~Y~~P~~p~ys~~l~~LI~~mL~~n--P~~RPnI~Qv~~~~~~l~~~~ 315 (738)
T KOG1989|consen 264 LAILNGNYSFPPFPNYSDRLKDLIRTMLQPN--PDERPNIYQVLEEIFELANKP 315 (738)
T ss_pred eeEEeccccCCCCccHHHHHHHHHHHHhccC--cccCCCHHHHHHHHHHHhcCC
Confidence 23444422 2222589999999999999999 999999999999999987654
No 39
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=2.8e-34 Score=313.11 Aligned_cols=209 Identities=21% Similarity=0.235 Sum_probs=172.8
Q ss_pred cccCCceEEEEEEE--CCeEEEEEEccC-----CCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCH
Q 003594 470 KCAGDWTNVYRGRL--NHASVAIKTLNN-----GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNL 540 (808)
Q Consensus 470 ~g~G~~g~Vy~~~~--~~~~vAiK~l~~-----~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL 540 (808)
+|+|+||.||+|.. ++..||+|++.. ......+.+|+.++.+++||||++++++|.+ ..|+||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 47899999999998 578999999872 2223568889999999999999999999865 78999999999999
Q ss_pred HHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-----
Q 003594 541 RDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC----- 615 (808)
Q Consensus 541 ~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~----- 615 (808)
.+++. ....+++..+..|+.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 81 ~~~l~----------~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~ 147 (312)
T cd05585 81 FHHLQ----------REGRFDLSRARFYTAELLCALENLHK---FNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD 147 (312)
T ss_pred HHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHeEECCCCcEEEEECcccccCccCC
Confidence 99994 34568999999999999999999999 6699999999999999999999999998753
Q ss_pred --------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHHHH
Q 003594 616 --------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELA 675 (808)
Q Consensus 616 --------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~ 675 (808)
..++.++|||||||++|+|+||++||..... ...+..++. ....+|...+..+.
T Consensus 148 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~-----~~~~~~~~~-~~~~~~~~~~~~~~ 221 (312)
T cd05585 148 DKTNTFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENV-----NEMYRKILQ-EPLRFPDGFDRDAK 221 (312)
T ss_pred CccccccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCH-----HHHHHHHHc-CCCCCCCcCCHHHH
Confidence 2357889999999999999999999964211 112222222 33456677889999
Q ss_pred HHHHHhhccCCCcCccccHHhhHH
Q 003594 676 GIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 676 ~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
+|+.+||..| |..||++..+.+
T Consensus 222 ~li~~~L~~d--p~~R~~~~~~~e 243 (312)
T cd05585 222 DLLIGLLSRD--PTRRLGYNGAQE 243 (312)
T ss_pred HHHHHHcCCC--HHHcCCCCCHHH
Confidence 9999999999 999987544333
No 40
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=3.3e-34 Score=314.88 Aligned_cols=211 Identities=22% Similarity=0.276 Sum_probs=175.9
Q ss_pred ccccCCceEEEEEEE--CCeEEEEEEccCC-----CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCC
Q 003594 469 LKCAGDWTNVYRGRL--NHASVAIKTLNNG-----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGN 539 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gs 539 (808)
++|+|+||.||++.. +|..||||++... .....+.+|+.+++.++||||+++++++.+ ..||||||+++|+
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g~ 81 (328)
T cd05593 2 LLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGGE 81 (328)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCCC
Confidence 578999999999997 5789999999732 223578889999999999999999998865 7899999999999
Q ss_pred HHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc----
Q 003594 540 LRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC---- 615 (808)
Q Consensus 540 L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~---- 615 (808)
|.+++. ....+++..+..|+.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 82 L~~~l~----------~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~ 148 (328)
T cd05593 82 LFFHLS----------RERVFSEDRTRFYGAEIVSALDYLHS---GKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITD 148 (328)
T ss_pred HHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecccCHHHeEECCCCcEEEecCcCCccCCCc
Confidence 999983 34568999999999999999999999 5699999999999999999999999998742
Q ss_pred ---------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHHH
Q 003594 616 ---------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEEL 674 (808)
Q Consensus 616 ---------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l 674 (808)
..++.++|||||||++|+|++|++||..... ......+......+|...+.++
T Consensus 149 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~------~~~~~~~~~~~~~~p~~~~~~~ 222 (328)
T cd05593 149 AATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH------EKLFELILMEDIKFPRTLSADA 222 (328)
T ss_pred ccccccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCH------HHHHHHhccCCccCCCCCCHHH
Confidence 2357889999999999999999999964321 1122222223345677788999
Q ss_pred HHHHHHhhccCCCcCccc-----cHHhhHHH
Q 003594 675 AGIALKCLSADQDANRDL-----RIAGVMKE 700 (808)
Q Consensus 675 ~~Li~~Cl~~dp~p~~Rp-----s~~evl~~ 700 (808)
.+|+.+||..| |..|| ++.++++.
T Consensus 223 ~~li~~~L~~d--P~~R~~~~~~~~~~il~h 251 (328)
T cd05593 223 KSLLSGLLIKD--PNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred HHHHHHHcCCC--HHHcCCCCCCCHHHHhcC
Confidence 99999999999 88997 77777643
No 41
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-34 Score=316.88 Aligned_cols=212 Identities=22% Similarity=0.336 Sum_probs=179.9
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEcc--CCCCHHHHHHHHHHHhccCCCCccceeeccc--cceEEEEeecCCCCH
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLN--NGLSEEDFQAKVSFLTAVRHPHLVAVMGCCS--ELKCIVFEYMPNGNL 540 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~--~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~--~~~~lV~Ey~~~gsL 540 (808)
..-+|+|+.|.||.+.. ++..||||++. .....+-+.+|+.+|+..+|+|||.++..|. +.+|+|||||+||+|
T Consensus 278 ~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ggsL 357 (550)
T KOG0578|consen 278 FKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYMEGGSL 357 (550)
T ss_pred hhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecCCCch
Confidence 34568999999999997 67899999998 2333466889999999999999999999884 489999999999999
Q ss_pred HHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-----
Q 003594 541 RDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC----- 615 (808)
Q Consensus 541 ~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~----- 615 (808)
.|.+. ...+++.++..|+.+++.||.|||. ++|+|||||.+||||+.+|.+||+|||+|..
T Consensus 358 TDvVt-----------~~~~~E~qIA~Icre~l~aL~fLH~---~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~ 423 (550)
T KOG0578|consen 358 TDVVT-----------KTRMTEGQIAAICREILQGLKFLHA---RGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQ 423 (550)
T ss_pred hhhhh-----------cccccHHHHHHHHHHHHHHHHHHHh---cceeeeccccceeEeccCCcEEEeeeeeeecccccc
Confidence 99994 3459999999999999999999999 6699999999999999999999999999843
Q ss_pred --------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhcc--CCCCCChhhHHH
Q 003594 616 --------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDG--NAGIWPLDLAEE 673 (808)
Q Consensus 616 --------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~--~~~~~p~~~~~~ 673 (808)
..|++|.||||||++++||+-|.|||..... -..+.-+.+. .....|...+..
T Consensus 424 ~KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~P-----lrAlyLIa~ng~P~lk~~~klS~~ 498 (550)
T KOG0578|consen 424 SKRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENP-----LRALYLIATNGTPKLKNPEKLSPE 498 (550)
T ss_pred CccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCCh-----HHHHHHHhhcCCCCcCCccccCHH
Confidence 4689999999999999999999999864211 1122223232 333456789999
Q ss_pred HHHHHHHhhccCCCcCccccHHhhHH
Q 003594 674 LAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 674 l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
|.+|+.+||+.| +..|+++.++|+
T Consensus 499 ~kdFL~~cL~~d--v~~RasA~eLL~ 522 (550)
T KOG0578|consen 499 LKDFLDRCLVVD--VEQRASAKELLE 522 (550)
T ss_pred HHHHHHHHhhcc--hhcCCCHHHHhc
Confidence 999999999999 999999999986
No 42
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-35 Score=312.33 Aligned_cols=218 Identities=22% Similarity=0.259 Sum_probs=175.2
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccC-CCCHH--HHHHHHHHHhccC-CCCccceeecccc---ceEEEEeecCCC
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNN-GLSEE--DFQAKVSFLTAVR-HPHLVAVMGCCSE---LKCIVFEYMPNG 538 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~-~~~~~--~~~~Ei~il~~l~-HpnIv~l~g~~~~---~~~lV~Ey~~~g 538 (808)
+-+|.|+||.||+|+- +|..||||.++. -...+ .-.||+..|++|+ |||||+|..++.+ .+|+|||||+ .
T Consensus 16 ~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~fVfE~Md-~ 94 (538)
T KOG0661|consen 16 RKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYFVFEFMD-C 94 (538)
T ss_pred HHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEeeeHHhhh-h
Confidence 4457999999999997 788999999983 23333 3468999999998 9999999999966 6799999996 7
Q ss_pred CHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc---
Q 003594 539 NLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC--- 615 (808)
Q Consensus 539 sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~--- 615 (808)
+|++++++ +...+++..+..|+.||++||+|+|.+ |++||||||+|||+..+..+||+|||+|+.
T Consensus 95 NLYqLmK~---------R~r~fse~~irnim~QilqGL~hiHk~---GfFHRDlKPENiLi~~~~~iKiaDFGLARev~S 162 (538)
T KOG0661|consen 95 NLYQLMKD---------RNRLFSESDIRNIMYQILQGLAHIHKH---GFFHRDLKPENILISGNDVIKIADFGLAREVRS 162 (538)
T ss_pred hHHHHHhh---------cCCcCCHHHHHHHHHHHHHHHHHHHhc---CcccccCChhheEecccceeEeccccccccccc
Confidence 99999963 467899999999999999999999995 599999999999999999999999999974
Q ss_pred ----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhc----------------HHHHHH
Q 003594 616 ----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALD----------------QTTLMQ 657 (808)
Q Consensus 616 ----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~----------------~~~~~~ 657 (808)
+.|+.+.||||+|||++|+.+-+|-|....+...+. ...+..
T Consensus 163 kpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg~~La~ 242 (538)
T KOG0661|consen 163 KPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEGYNLAS 242 (538)
T ss_pred CCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhHHHHHH
Confidence 468999999999999999999999886543310000 011111
Q ss_pred HhccCCCC--------CChhhHHHHHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 658 VLDGNAGI--------WPLDLAEELAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 658 ~ld~~~~~--------~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
.+.-..+. .-+..+.++.+||.+||.+| |..|||+.++++.
T Consensus 243 ~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WD--P~kRpTA~~al~~ 291 (538)
T KOG0661|consen 243 AMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWD--PDKRPTASQALQH 291 (538)
T ss_pred HhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCC--CccCccHHHHhcC
Confidence 11111111 11247789999999999999 9999999999864
No 43
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-34 Score=302.94 Aligned_cols=217 Identities=21% Similarity=0.296 Sum_probs=180.1
Q ss_pred ccccccccCCceEEEEEEE--CCeEEEEEEcc---CCCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCC
Q 003594 465 ERFRLKCAGDWTNVYRGRL--NHASVAIKTLN---NGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPN 537 (808)
Q Consensus 465 ~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~---~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~ 537 (808)
+....+|.|..+.||+|+. .+..||||+++ -..+.+.+.+|+..|+.++||||++++..|.. .+|+||.||.+
T Consensus 29 eL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmpfMa~ 108 (516)
T KOG0582|consen 29 ELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMPFMAG 108 (516)
T ss_pred eEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeehhhcC
Confidence 3345678999999999998 68999999998 22335789999999999999999999999854 89999999999
Q ss_pred CCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--
Q 003594 538 GNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-- 615 (808)
Q Consensus 538 gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-- 615 (808)
||+.++++.. ....+++..+..|+.++++||.|||. .|.||||||+.||||+.+|.+||+|||.+-.
T Consensus 109 GS~ldIik~~--------~~~Gl~E~~Ia~iLre~LkaL~YLH~---~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~ 177 (516)
T KOG0582|consen 109 GSLLDIIKTY--------YPDGLEEASIATILREVLKALDYLHQ---NGHIHRDVKAGNILIDSDGTVKLADFGVSASLF 177 (516)
T ss_pred CcHHHHHHHH--------ccccccHHHHHHHHHHHHHHHHHHHh---cCceecccccccEEEcCCCcEEEcCceeeeeec
Confidence 9999999765 34559999999999999999999999 5599999999999999999999999987522
Q ss_pred -----------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCC--
Q 003594 616 -----------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG-- 664 (808)
Q Consensus 616 -----------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~-- 664 (808)
.+|+.|+|||||||+.+||.+|..||..... ...+...+.+..+
T Consensus 178 ~~G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pP-----mkvLl~tLqn~pp~~ 252 (516)
T KOG0582|consen 178 DSGDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPP-----MKVLLLTLQNDPPTL 252 (516)
T ss_pred ccCceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCCh-----HHHHHHHhcCCCCCc
Confidence 4689999999999999999999999986432 1222222222211
Q ss_pred ---CCC----hhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 665 ---IWP----LDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 665 ---~~p----~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
..+ ...+..+..++..||.+| |+.|||++++++
T Consensus 253 ~t~~~~~d~~k~~~ksf~e~i~~CL~kD--P~kRptAskLlk 292 (516)
T KOG0582|consen 253 LTSGLDKDEDKKFSKSFREMIALCLVKD--PSKRPTASKLLK 292 (516)
T ss_pred ccccCChHHhhhhcHHHHHHHHHHhhcC--cccCCCHHHHhc
Confidence 111 235668999999999999 999999999985
No 44
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.4e-34 Score=286.02 Aligned_cols=216 Identities=20% Similarity=0.301 Sum_probs=184.8
Q ss_pred cccccccCCceEEEEEEE--CCeEEEEEEccC-----CCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecC
Q 003594 466 RFRLKCAGDWTNVYRGRL--NHASVAIKTLNN-----GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMP 536 (808)
Q Consensus 466 ~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~-----~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~ 536 (808)
..+++|+|-||.||.|+. ++-.||+|++.. .....++.+|++|-+.|+||||+++||+|-+ ..||++||.+
T Consensus 26 igr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLilEya~ 105 (281)
T KOG0580|consen 26 IGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLILEYAP 105 (281)
T ss_pred ccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEEEEecC
Confidence 347788999999999998 567899999972 3345789999999999999999999999977 7899999999
Q ss_pred CCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-
Q 003594 537 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC- 615 (808)
Q Consensus 537 ~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~- 615 (808)
+|+|...|... ....+++.....++.|+|.||.|+|. +++|||||||+|+|++.++..||+|||-+..
T Consensus 106 ~gel~k~L~~~--------~~~~f~e~~~a~Yi~q~A~Al~y~h~---k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~ 174 (281)
T KOG0580|consen 106 RGELYKDLQEG--------RMKRFDEQRAATYIKQLANALLYCHL---KRVIHRDIKPENLLLGSAGELKIADFGWSVHA 174 (281)
T ss_pred CchHHHHHHhc--------ccccccccchhHHHHHHHHHHHHhcc---CCcccCCCCHHHhccCCCCCeeccCCCceeec
Confidence 99999999643 45668888889999999999999999 7799999999999999999999999998743
Q ss_pred ----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHH
Q 003594 616 ----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEE 673 (808)
Q Consensus 616 ----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~ 673 (808)
..++..+|+|++|++.||++.|.+||.... ....+..+ ......+|..++..
T Consensus 175 p~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~-----~~etYkrI-~k~~~~~p~~is~~ 248 (281)
T KOG0580|consen 175 PSNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS-----HSETYKRI-RKVDLKFPSTISGG 248 (281)
T ss_pred CCCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh-----hHHHHHHH-HHccccCCcccChh
Confidence 346889999999999999999999998642 22333333 33445667889999
Q ss_pred HHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 674 LAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 674 l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
..++|.+|+.++ |..|.+..+++..
T Consensus 249 a~dlI~~ll~~~--p~~r~~l~~v~~h 273 (281)
T KOG0580|consen 249 AADLISRLLVKN--PIERLALTEVMDH 273 (281)
T ss_pred HHHHHHHHhccC--ccccccHHHHhhh
Confidence 999999999999 8899998888753
No 45
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=1.1e-33 Score=298.45 Aligned_cols=215 Identities=23% Similarity=0.391 Sum_probs=179.8
Q ss_pred cccccCCceEEEEEEE-CCeEEEEEEccC-CCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCHHHH
Q 003594 468 RLKCAGDWTNVYRGRL-NHASVAIKTLNN-GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNLRDK 543 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~-~~~~vAiK~l~~-~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL~~~ 543 (808)
+.+|.|+||.||++.+ ++..+|+|.+.. ......|.+|+.+|++++||||++++++|.+ ..++||||+++|+|.++
T Consensus 10 ~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~~~~L~~~ 89 (256)
T cd05114 10 KELGSGQFGVVHLGKWRAQIKVAIKAINEGAMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFMENGCLLNY 89 (256)
T ss_pred eEecCCcCceEEEEEeccCceEEEEecccCCccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCCCCcHHHH
Confidence 4568999999999998 456899999873 3446789999999999999999999999865 78999999999999999
Q ss_pred HhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--------
Q 003594 544 LFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-------- 615 (808)
Q Consensus 544 l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-------- 615 (808)
+... ...++|..+..++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 90 ~~~~---------~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~ 157 (256)
T cd05114 90 LRQR---------QGKLSKDMLLSMCQDVCEGMEYLER---NSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTS 157 (256)
T ss_pred HHhC---------ccCCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcceEEEcCCCeEEECCCCCccccCCCceec
Confidence 8532 2458999999999999999999999 5699999999999999999999999998742
Q ss_pred ------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHHHHH
Q 003594 616 ------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAG 676 (808)
Q Consensus 616 ------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~ 676 (808)
..++.++||||||+++|+|++ |++||.... ....+..+........|...+..+.+
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~-----~~~~~~~i~~~~~~~~~~~~~~~~~~ 232 (256)
T cd05114 158 SSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKS-----NYEVVEMISRGFRLYRPKLASMTVYE 232 (256)
T ss_pred cCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHHHCCCCCCCCCCCCHHHHH
Confidence 134678999999999999999 899986432 12223334433344445567788999
Q ss_pred HHHHhhccCCCcCccccHHhhHHHH
Q 003594 677 IALKCLSADQDANRDLRIAGVMKEL 701 (808)
Q Consensus 677 Li~~Cl~~dp~p~~Rps~~evl~~L 701 (808)
|+.+||..+ |..||++.+++..|
T Consensus 233 li~~c~~~~--p~~Rps~~~l~~~l 255 (256)
T cd05114 233 VMYSCWHEK--PEGRPTFAELLRAI 255 (256)
T ss_pred HHHHHccCC--cccCcCHHHHHHhh
Confidence 999999999 99999999999876
No 46
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.1e-33 Score=299.46 Aligned_cols=216 Identities=20% Similarity=0.361 Sum_probs=180.6
Q ss_pred cccCCceEEEEEEEC----CeEEEEEEccCCCC---HHHHHHHHHHHhccCCCCccceeecccc-ceEEEEeecCCCCHH
Q 003594 470 KCAGDWTNVYRGRLN----HASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE-LKCIVFEYMPNGNLR 541 (808)
Q Consensus 470 ~g~G~~g~Vy~~~~~----~~~vAiK~l~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~-~~~lV~Ey~~~gsL~ 541 (808)
+|.|+||.||+|.+. +..||+|++..... .+.|.+|+.++++++||||++++++|.. ..++||||+++|+|.
T Consensus 3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~lv~e~~~~~~L~ 82 (257)
T cd05115 3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEAEALMLVMEMASGGPLN 82 (257)
T ss_pred cCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcCCCeEEEEEeCCCCCHH
Confidence 578999999999872 45799999974332 3568999999999999999999999865 688999999999999
Q ss_pred HHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc------
Q 003594 542 DKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC------ 615 (808)
Q Consensus 542 ~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~------ 615 (808)
+++.. ....+++..+++++.||+.||.|||+ .+++||||||+|||++.++.+||+|||++..
T Consensus 83 ~~l~~---------~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~ 150 (257)
T cd05115 83 KFLSG---------KKDEITVSNVVELMHQVSMGMKYLEG---KNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDS 150 (257)
T ss_pred HHHHh---------CCCCCCHHHHHHHHHHHHHHHHHHHh---cCeeecccchheEEEcCCCcEEeccCCccccccCCcc
Confidence 99952 24568999999999999999999999 5699999999999999999999999998742
Q ss_pred ----------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHH
Q 003594 616 ----------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAE 672 (808)
Q Consensus 616 ----------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~ 672 (808)
..++.++|||||||++|+|++ |.+||..... ......+..+.....|..++.
T Consensus 151 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 225 (257)
T cd05115 151 YYKARSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKG-----PEVMSFIEQGKRLDCPAECPP 225 (257)
T ss_pred ceeccCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCH-----HHHHHHHHCCCCCCCCCCCCH
Confidence 134668999999999999996 9999865321 122233333445566778899
Q ss_pred HHHHHHHHhhccCCCcCccccHHhhHHHHHHH
Q 003594 673 ELAGIALKCLSADQDANRDLRIAGVMKELDEV 704 (808)
Q Consensus 673 ~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l 704 (808)
++.+++.+||..+ |.+||++.+|.+.|+.+
T Consensus 226 ~l~~li~~c~~~~--~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 226 EMYALMKDCWIYK--WEDRPNFAKVEERMRTY 255 (257)
T ss_pred HHHHHHHHHcCCC--hhhCcCHHHHHHHHhhh
Confidence 9999999999999 99999999999988764
No 47
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=4.2e-34 Score=314.16 Aligned_cols=206 Identities=20% Similarity=0.232 Sum_probs=172.7
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccCC-----CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNNG-----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPN 537 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~ 537 (808)
.+.+|.|+||.||+|.+ +++.||||++... ...+.+.+|+.++.+++||||+++++++.+ ..|+||||+++
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 102 (329)
T PTZ00263 23 GETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLLEFVVG 102 (329)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEEcCCCC
Confidence 35678999999999998 5789999998721 234578899999999999999999999865 78999999999
Q ss_pred CCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--
Q 003594 538 GNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-- 615 (808)
Q Consensus 538 gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-- 615 (808)
|+|.+++. ....+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||++..
T Consensus 103 ~~L~~~l~----------~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~ 169 (329)
T PTZ00263 103 GELFTHLR----------KAGRFPNDVAKFYHAELVLAFEYLHS---KDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVP 169 (329)
T ss_pred ChHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHEEECCCCCEEEeeccCceEcC
Confidence 99999994 34568999999999999999999999 5699999999999999999999999999753
Q ss_pred --------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHHHH
Q 003594 616 --------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELA 675 (808)
Q Consensus 616 --------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~ 675 (808)
..++.++|||||||++|+|+||++||..... ...+..+... ...+|..++..+.
T Consensus 170 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~-----~~~~~~i~~~-~~~~p~~~~~~~~ 243 (329)
T PTZ00263 170 DRTFTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP-----FRIYEKILAG-RLKFPNWFDGRAR 243 (329)
T ss_pred CCcceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCH-----HHHHHHHhcC-CcCCCCCCCHHHH
Confidence 2367899999999999999999999964221 1222333332 3455666788999
Q ss_pred HHHHHhhccCCCcCcccc
Q 003594 676 GIALKCLSADQDANRDLR 693 (808)
Q Consensus 676 ~Li~~Cl~~dp~p~~Rps 693 (808)
+|+.+||+.| |..||+
T Consensus 244 ~li~~~L~~d--P~~R~~ 259 (329)
T PTZ00263 244 DLVKGLLQTD--HTKRLG 259 (329)
T ss_pred HHHHHHhhcC--HHHcCC
Confidence 9999999999 999997
No 48
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=5.4e-34 Score=319.07 Aligned_cols=228 Identities=22% Similarity=0.321 Sum_probs=180.0
Q ss_pred ccccccCCceEEEEEEE-------CCeEEEEEEccCCC---CHHHHHHHHHHHhcc-CCCCccceeecccc--ceEEEEe
Q 003594 467 FRLKCAGDWTNVYRGRL-------NHASVAIKTLNNGL---SEEDFQAKVSFLTAV-RHPHLVAVMGCCSE--LKCIVFE 533 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~-------~~~~vAiK~l~~~~---~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~~~lV~E 533 (808)
.+.+|+|+||.||+|.+ ++..||||+++... ..+.+.+|+.+|..+ +|||||+++|+|.+ ..++|||
T Consensus 40 ~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~~~lv~E 119 (375)
T cd05104 40 GKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGPTLVITE 119 (375)
T ss_pred hheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCcceeeeh
Confidence 35678999999999974 24689999997322 235788999999999 89999999999965 7899999
Q ss_pred ecCCCCHHHHHhhcccccc-------------------------------------------------------------
Q 003594 534 YMPNGNLRDKLFTSQRNYK------------------------------------------------------------- 552 (808)
Q Consensus 534 y~~~gsL~~~l~~~~~~~~------------------------------------------------------------- 552 (808)
|++||+|.+++........
T Consensus 120 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (375)
T cd05104 120 YCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDV 199 (375)
T ss_pred hccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceeccccc
Confidence 9999999999965321000
Q ss_pred ----ccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-------------
Q 003594 553 ----NCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC------------- 615 (808)
Q Consensus 553 ----~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~------------- 615 (808)
.......++|..++.|+.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 200 ~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~ 276 (375)
T cd05104 200 TSEILEEDELALDTEDLLSFSYQVAKGMSFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNA 276 (375)
T ss_pred HHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCchhhEEEECCCcEEEecCccceeccCcccccccCCC
Confidence 00012358999999999999999999999 5699999999999999999999999998742
Q ss_pred --------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHHHHHHHHH
Q 003594 616 --------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAGIALK 680 (808)
Q Consensus 616 --------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~ 680 (808)
..++.++|||||||++|||++ |.+||..... .......+........|...+.++.+|+.+
T Consensus 277 ~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~li~~ 352 (375)
T cd05104 277 RLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPV----DSKFYKMIKEGYRMLSPECAPSEMYDIMKS 352 (375)
T ss_pred CCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCc----hHHHHHHHHhCccCCCCCCCCHHHHHHHHH
Confidence 236788999999999999998 8888864321 111122222233333445567899999999
Q ss_pred hhccCCCcCccccHHhhHHHHHH
Q 003594 681 CLSADQDANRDLRIAGVMKELDE 703 (808)
Q Consensus 681 Cl~~dp~p~~Rps~~evl~~L~~ 703 (808)
||+.| |..||++.+|++.|+.
T Consensus 353 cl~~d--P~~RPs~~eil~~l~~ 373 (375)
T cd05104 353 CWDAD--PLKRPTFKQIVQLIEQ 373 (375)
T ss_pred HccCC--hhHCcCHHHHHHHHHh
Confidence 99999 9999999999999985
No 49
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=1.3e-33 Score=298.01 Aligned_cols=218 Identities=25% Similarity=0.375 Sum_probs=182.9
Q ss_pred cccccCCceEEEEEEECCeEEEEEEccCCCCHHHHHHHHHHHhccCCCCccceeecccc---ceEEEEeecCCCCHHHHH
Q 003594 468 RLKCAGDWTNVYRGRLNHASVAIKTLNNGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE---LKCIVFEYMPNGNLRDKL 544 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~~~~~vAiK~l~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~---~~~lV~Ey~~~gsL~~~l 544 (808)
+++|.|+||.||++...|..||+|.+......+.|.+|+.++++++|||++++++++.. ..++||||+++|+|.+++
T Consensus 12 ~~lg~g~~~~v~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~ 91 (256)
T cd05082 12 QTIGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYL 91 (256)
T ss_pred eeecccCCCeEEEEEEcCCcEEEEEeCCCchHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECCCCCcHHHHH
Confidence 56788999999999999999999999866666789999999999999999999997632 679999999999999999
Q ss_pred hhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc---------
Q 003594 545 FTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC--------- 615 (808)
Q Consensus 545 ~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~--------- 615 (808)
... ....+++..++.++.||+.||.|||+ .+|+||||||+||+++.++.+||+|||++..
T Consensus 92 ~~~--------~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 160 (256)
T cd05082 92 RSR--------GRSVLGGDCLLKFSLDVCEAMEYLEA---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGK 160 (256)
T ss_pred Hhc--------CCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeccccchheEEEcCCCcEEecCCccceeccccCCCCc
Confidence 543 23458999999999999999999999 5699999999999999999999999998753
Q ss_pred -------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHHHHHHHHHh
Q 003594 616 -------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAGIALKC 681 (808)
Q Consensus 616 -------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~C 681 (808)
..++.++|||||||++|+|++ |++||..... ......+........+..++..+.+++.+|
T Consensus 161 ~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 235 (256)
T cd05082 161 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-----KDVVPRVEKGYKMDAPDGCPPVVYDVMKQC 235 (256)
T ss_pred cceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHhcCCCCCCCCCCCHHHHHHHHHH
Confidence 246778999999999999998 9999864211 111122222233445567789999999999
Q ss_pred hccCCCcCccccHHhhHHHHHH
Q 003594 682 LSADQDANRDLRIAGVMKELDE 703 (808)
Q Consensus 682 l~~dp~p~~Rps~~evl~~L~~ 703 (808)
|..+ |..||++.++++.|+.
T Consensus 236 l~~~--p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 236 WHLD--AATRPSFLQLREQLEH 255 (256)
T ss_pred hcCC--hhhCcCHHHHHHHHhc
Confidence 9999 9999999999998875
No 50
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=1.1e-33 Score=297.66 Aligned_cols=215 Identities=24% Similarity=0.391 Sum_probs=178.4
Q ss_pred ccccCCceEEEEEEE--CCeEEEEEEccCCCC---HHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCHH
Q 003594 469 LKCAGDWTNVYRGRL--NHASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNLR 541 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL~ 541 (808)
.+|.|+||.||+|.+ +++.||+|.+..... ...|.+|+.++++++||||++++++|.. ..++||||+++++|.
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 81 (252)
T cd05084 2 RIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFL 81 (252)
T ss_pred ccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcHH
Confidence 468899999999998 689999998864332 3578999999999999999999999865 789999999999999
Q ss_pred HHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc------
Q 003594 542 DKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC------ 615 (808)
Q Consensus 542 ~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~------ 615 (808)
+++.. ....+++..++.++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||++..
T Consensus 82 ~~~~~---------~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~ 149 (252)
T cd05084 82 TFLRT---------EGPRLKVKELIQMVENAAAGMEYLES---KHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVY 149 (252)
T ss_pred HHHHh---------CCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheEEEcCCCcEEECccccCcccccccc
Confidence 99942 23468999999999999999999999 5699999999999999999999999998642
Q ss_pred ---------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHH
Q 003594 616 ---------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEE 673 (808)
Q Consensus 616 ---------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~ 673 (808)
..++.++||||||+++|+|++ |.+||..... ......+........+..++..
T Consensus 150 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 224 (252)
T cd05084 150 ASTGGMKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSN-----QQTREAIEQGVRLPCPELCPDA 224 (252)
T ss_pred cccCCCCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCH-----HHHHHHHHcCCCCCCcccCCHH
Confidence 124667999999999999998 8888864321 1112222222344556677889
Q ss_pred HHHHHHHhhccCCCcCccccHHhhHHHHH
Q 003594 674 LAGIALKCLSADQDANRDLRIAGVMKELD 702 (808)
Q Consensus 674 l~~Li~~Cl~~dp~p~~Rps~~evl~~L~ 702 (808)
+.+|+.+||+.+ |..||++.++++.|+
T Consensus 225 ~~~li~~~l~~~--p~~Rps~~~~~~~l~ 251 (252)
T cd05084 225 VYRLMERCWEYD--PGQRPSFSTVHQELQ 251 (252)
T ss_pred HHHHHHHHcCCC--hhhCcCHHHHHHHHh
Confidence 999999999999 999999999998875
No 51
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3e-34 Score=317.34 Aligned_cols=213 Identities=21% Similarity=0.301 Sum_probs=185.9
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccC-----CCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCC
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNN-----GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNG 538 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~-----~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~g 538 (808)
+-+|.|+.|.|-.|++ +|+.+|||++.. ......+.+|+-||+.|.|||++.+|+++.+ ++|||.||++||
T Consensus 18 kTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvlEyv~gG 97 (786)
T KOG0588|consen 18 KTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVLEYVPGG 97 (786)
T ss_pred ccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEEEecCCc
Confidence 4458999999999998 899999999972 2335678999999999999999999999977 899999999999
Q ss_pred CHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc---
Q 003594 539 NLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC--- 615 (808)
Q Consensus 539 sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~--- 615 (808)
-|+++| -..+++++..+.+++.||+.|+.|+|. .+|+||||||+|+|||.++.+||+|||+|..
T Consensus 98 ELFdyl----------v~kG~l~e~eaa~ff~QIi~gv~yCH~---~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~ 164 (786)
T KOG0588|consen 98 ELFDYL----------VRKGPLPEREAAHFFRQILDGVSYCHA---FNICHRDLKPENLLLDVKNNIKIADFGMASLEVP 164 (786)
T ss_pred hhHHHH----------HhhCCCCCHHHHHHHHHHHHHHHHHhh---hcceeccCCchhhhhhcccCEeeeccceeecccC
Confidence 999999 456789999999999999999999999 5599999999999999999999999999854
Q ss_pred ----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHH
Q 003594 616 ----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEE 673 (808)
Q Consensus 616 ----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~ 673 (808)
...+.++||||.|||||.||||+.||+. .+-..+..-+.......|..++.+
T Consensus 165 gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD------dNir~LLlKV~~G~f~MPs~Is~e 238 (786)
T KOG0588|consen 165 GKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD------DNIRVLLLKVQRGVFEMPSNISSE 238 (786)
T ss_pred CccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC------ccHHHHHHHHHcCcccCCCcCCHH
Confidence 1246899999999999999999999984 222333444445566788899999
Q ss_pred HHHHHHHhhccCCCcCccccHHhhHHHH
Q 003594 674 LAGIALKCLSADQDANRDLRIAGVMKEL 701 (808)
Q Consensus 674 l~~Li~~Cl~~dp~p~~Rps~~evl~~L 701 (808)
..+|+.+||..| |..|.|+.+|++.-
T Consensus 239 aQdLLr~ml~VD--p~~RiT~~eI~kHP 264 (786)
T KOG0588|consen 239 AQDLLRRMLDVD--PSTRITTEEILKHP 264 (786)
T ss_pred HHHHHHHHhccC--ccccccHHHHhhCc
Confidence 999999999999 99999999998753
No 52
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=8.4e-34 Score=307.76 Aligned_cols=230 Identities=23% Similarity=0.372 Sum_probs=176.3
Q ss_pred cccccCCceEEEEEEEC------------------CeEEEEEEccCCCC---HHHHHHHHHHHhccCCCCccceeecccc
Q 003594 468 RLKCAGDWTNVYRGRLN------------------HASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE 526 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~~------------------~~~vAiK~l~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~ 526 (808)
+.+|+|+||.||+|.+. +..||+|.+..... ...|.+|+.+|.+++||||++++++|.+
T Consensus 11 ~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~ 90 (304)
T cd05096 11 EKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRLLGVCVD 90 (304)
T ss_pred eEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEec
Confidence 45689999999999852 24699999984332 3578999999999999999999999865
Q ss_pred --ceEEEEeecCCCCHHHHHhhccccccc---------cccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCC
Q 003594 527 --LKCIVFEYMPNGNLRDKLFTSQRNYKN---------CSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPS 595 (808)
Q Consensus 527 --~~~lV~Ey~~~gsL~~~l~~~~~~~~~---------~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~ 595 (808)
..++||||+++|+|.+++......... ......++|..++.|+.||+.||.|||+ .+|+||||||+
T Consensus 91 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~ivH~dlkp~ 167 (304)
T cd05096 91 EDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSS---LNFVHRDLATR 167 (304)
T ss_pred CCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHH---CCccccCcchh
Confidence 789999999999999999653211000 0123468999999999999999999999 56999999999
Q ss_pred CcccCCCccEEEEeCCCccc---------------------------CCCCcchhhHhHHHHHHHHHc--CCCCchhhHH
Q 003594 596 SILLDRNLVAKISGLGLNIC---------------------------DQLNVRSDIRAFGTLLLHLLT--GRNWAGLVEK 646 (808)
Q Consensus 596 NILld~~~~~kl~DfGla~~---------------------------~~~t~ksDVwS~Gvil~ellt--G~~P~~~~~~ 646 (808)
|||++.++.+||+|||+++. ..++.++||||||+++|+|++ +..||.....
T Consensus 168 Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~ 247 (304)
T cd05096 168 NCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQPYGELTD 247 (304)
T ss_pred heEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCCCCcCCH
Confidence 99999999999999998742 236788999999999999987 4567754322
Q ss_pred HhhhcH--HHHHHHhccCCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHH
Q 003594 647 AMALDQ--TTLMQVLDGNAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELD 702 (808)
Q Consensus 647 ~~~~~~--~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~ 702 (808)
...... ..+...........|..++..+.+|+.+||+.| |..|||+.+|.+.|+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~--p~~RPs~~~i~~~l~ 303 (304)
T cd05096 248 EQVIENAGEFFRDQGRQVYLFRPPPCPQGLYELMLQCWSRD--CRERPSFSDIHAFLT 303 (304)
T ss_pred HHHHHHHHHHhhhccccccccCCCCCCHHHHHHHHHHccCC--chhCcCHHHHHHHHh
Confidence 100100 001111111122334567889999999999999 999999999988875
No 53
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=1.8e-33 Score=299.31 Aligned_cols=223 Identities=21% Similarity=0.370 Sum_probs=179.6
Q ss_pred cccccCCceEEEEEEEC--C--eEEEEEEccCC----CCHHHHHHHHHHHhccCCCCccceeecccc--------ceEEE
Q 003594 468 RLKCAGDWTNVYRGRLN--H--ASVAIKTLNNG----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--------LKCIV 531 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~~--~--~~vAiK~l~~~----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--------~~~lV 531 (808)
+.+|+|+||.||+|.+. + ..||+|.+... ...+.|.+|+.+++.++||||++++++|.. ..++|
T Consensus 5 ~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~v 84 (272)
T cd05075 5 KTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSPVVI 84 (272)
T ss_pred cccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCcEEE
Confidence 46789999999999983 3 36999998732 223578899999999999999999998732 46899
Q ss_pred EeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCC
Q 003594 532 FEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLG 611 (808)
Q Consensus 532 ~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfG 611 (808)
|||+++|+|.+++...... .....+++.....++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 85 ~e~~~~~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 85 LPFMKHGDLHSFLLYSRLG----DCPQYLPTQMLVKFMTDIASGMEYLSS---KSFIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred EEeCCCCcHHHHHHHhccc----CCcccCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhheEEcCCCCEEECCCC
Confidence 9999999999988532110 233568999999999999999999999 569999999999999999999999999
Q ss_pred Cccc---------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCC
Q 003594 612 LNIC---------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNA 663 (808)
Q Consensus 612 la~~---------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~ 663 (808)
+++. ..++.++||||||+++|+|++ |.+||..... ......+..+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-----~~~~~~~~~~~~ 232 (272)
T cd05075 158 LSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN-----SEIYDYLRQGNR 232 (272)
T ss_pred cccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHHHHcCCC
Confidence 9752 125678999999999999999 8889864321 122233333333
Q ss_pred CCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHH
Q 003594 664 GIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEV 704 (808)
Q Consensus 664 ~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l 704 (808)
...+..++..+.+++.+||+.| |..||++.++++.|+.+
T Consensus 233 ~~~~~~~~~~~~~li~~~l~~~--p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 233 LKQPPDCLDGLYSLMSSCWLLN--PKDRPSFETLRCELEKA 271 (272)
T ss_pred CCCCCCCCHHHHHHHHHHcCCC--cccCcCHHHHHHHHHhh
Confidence 4455677889999999999999 99999999999999864
No 54
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.1e-33 Score=316.32 Aligned_cols=233 Identities=20% Similarity=0.329 Sum_probs=183.3
Q ss_pred cccccccccccCCceEEEEEEE-------CCeEEEEEEccCCCC---HHHHHHHHHHHhcc-CCCCccceeecccc--ce
Q 003594 462 DFSERFRLKCAGDWTNVYRGRL-------NHASVAIKTLNNGLS---EEDFQAKVSFLTAV-RHPHLVAVMGCCSE--LK 528 (808)
Q Consensus 462 ~f~~~~~i~g~G~~g~Vy~~~~-------~~~~vAiK~l~~~~~---~~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~~ 528 (808)
+|.. .+.+|.|+||.||+|.+ ++..||||++..... ...+.+|+.+++.+ +|||||+++|+|.+ ..
T Consensus 39 ~~~~-~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~~ 117 (374)
T cd05106 39 NLQF-GKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGPV 117 (374)
T ss_pred Hcee-hheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCCe
Confidence 3443 35678999999999985 125799999974332 35688999999999 89999999999966 78
Q ss_pred EEEEeecCCCCHHHHHhhccccc---------------------------------------------------------
Q 003594 529 CIVFEYMPNGNLRDKLFTSQRNY--------------------------------------------------------- 551 (808)
Q Consensus 529 ~lV~Ey~~~gsL~~~l~~~~~~~--------------------------------------------------------- 551 (808)
++||||+++|+|.+++.......
T Consensus 118 ~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (374)
T cd05106 118 LVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDS 197 (374)
T ss_pred EEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCccccccccccc
Confidence 99999999999999996432100
Q ss_pred ---cccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-------------
Q 003594 552 ---KNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC------------- 615 (808)
Q Consensus 552 ---~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~------------- 615 (808)
.......++++..+++|+.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 198 ~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~---~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~ 274 (374)
T cd05106 198 KDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLAS---KNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNA 274 (374)
T ss_pred cchhccCCCCCcCHHHHHHHHHHHHHHHHHHHH---CCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCC
Confidence 000112358999999999999999999999 6699999999999999999999999998742
Q ss_pred --------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHh-ccCCCCCChhhHHHHHHHHH
Q 003594 616 --------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVL-DGNAGIWPLDLAEELAGIAL 679 (808)
Q Consensus 616 --------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~l-d~~~~~~p~~~~~~l~~Li~ 679 (808)
..++.++|||||||++|+|++ |++||..... ...+...+ .......|...+.++.+++.
T Consensus 275 ~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~li~ 349 (374)
T cd05106 275 RLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILV-----NSKFYKMVKRGYQMSRPDFAPPEIYSIMK 349 (374)
T ss_pred CCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccc-----cHHHHHHHHcccCccCCCCCCHHHHHHHH
Confidence 236789999999999999997 9999865321 11122222 22333445556789999999
Q ss_pred HhhccCCCcCccccHHhhHHHHHHHH
Q 003594 680 KCLSADQDANRDLRIAGVMKELDEVR 705 (808)
Q Consensus 680 ~Cl~~dp~p~~Rps~~evl~~L~~l~ 705 (808)
+||+.| |..||++.+|++.|+++.
T Consensus 350 ~cl~~d--p~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 350 MCWNLE--PTERPTFSQISQLIQRQL 373 (374)
T ss_pred HHcCCC--hhhCcCHHHHHHHHHHHh
Confidence 999999 999999999999998863
No 55
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-34 Score=303.31 Aligned_cols=218 Identities=21% Similarity=0.274 Sum_probs=176.9
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCCC----------------CHHHHHHHHHHHhccCCCCccceeecccc---
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNGL----------------SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--- 526 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~----------------~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--- 526 (808)
+-+|.|.||.|-+++. +++.||||++.... ..+...+||.||++++|||||+|+.+..+
T Consensus 103 ~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~LiEvLDDP~s 182 (576)
T KOG0585|consen 103 KEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKLIEVLDDPES 182 (576)
T ss_pred hhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEEEEeecCccc
Confidence 4468999999999998 68999999997110 12578999999999999999999999855
Q ss_pred -ceEEEEeecCCCCHHHHHhhccccccccccCCC-CCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCcc
Q 003594 527 -LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARA-LRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLV 604 (808)
Q Consensus 527 -~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~-l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~ 604 (808)
..|||+|||..|.+...= ...+ ++..+++.|+.++..||.|||. ++||||||||+|+||+++|+
T Consensus 183 ~~~YlVley~s~G~v~w~p-----------~d~~els~~~Ar~ylrDvv~GLEYLH~---QgiiHRDIKPsNLLl~~~g~ 248 (576)
T KOG0585|consen 183 DKLYLVLEYCSKGEVKWCP-----------PDKPELSEQQARKYLRDVVLGLEYLHY---QGIIHRDIKPSNLLLSSDGT 248 (576)
T ss_pred CceEEEEEeccCCccccCC-----------CCcccccHHHHHHHHHHHHHHHHHHHh---cCeeccccchhheEEcCCCc
Confidence 789999999988775432 3344 9999999999999999999999 66999999999999999999
Q ss_pred EEEEeCCCccc----------------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhh
Q 003594 605 AKISGLGLNIC----------------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMAL 650 (808)
Q Consensus 605 ~kl~DfGla~~----------------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~ 650 (808)
+||+|||.+.. ...+.+.||||+||+||-|+.|+.||... .
T Consensus 249 VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~-----~ 323 (576)
T KOG0585|consen 249 VKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDD-----F 323 (576)
T ss_pred EEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccc-----h
Confidence 99999998742 11357889999999999999999999753 2
Q ss_pred cHHHHHHHhcc-CCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHHHH
Q 003594 651 DQTTLMQVLDG-NAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVRK 706 (808)
Q Consensus 651 ~~~~~~~~ld~-~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~~ 706 (808)
....+..++.. ...+..+++.+.+.+||.++|++| |..|.+..+|.......+.
T Consensus 324 ~~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~Kd--P~~Ri~l~~ik~Hpwvt~~ 378 (576)
T KOG0585|consen 324 ELELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKD--PEQRITLPDIKLHPWVTRD 378 (576)
T ss_pred HHHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcC--hhheeehhhheecceeccC
Confidence 23344455543 222222357899999999999999 9999998888766654443
No 56
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=3.6e-33 Score=294.84 Aligned_cols=216 Identities=24% Similarity=0.404 Sum_probs=180.4
Q ss_pred ccccCCceEEEEEEE--CC---eEEEEEEccCCC---CHHHHHHHHHHHhccCCCCccceeecccc-ceEEEEeecCCCC
Q 003594 469 LKCAGDWTNVYRGRL--NH---ASVAIKTLNNGL---SEEDFQAKVSFLTAVRHPHLVAVMGCCSE-LKCIVFEYMPNGN 539 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~--~~---~~vAiK~l~~~~---~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-~~~lV~Ey~~~gs 539 (808)
.+|+|+||.||+|.+ ++ ..||+|.+.... ..+.+.+|+.+++.+.|||||++++++.. ..++||||+++|+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~~ 81 (257)
T cd05060 2 ELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCKGEPLMLVMELAPLGP 81 (257)
T ss_pred ccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEcCCceEEEEEeCCCCc
Confidence 468899999999987 22 689999998433 24678999999999999999999999865 7899999999999
Q ss_pred HHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc----
Q 003594 540 LRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC---- 615 (808)
Q Consensus 540 L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~---- 615 (808)
|.+++. ....+++..+..++.|++.||.|||. .+++||||||+|||++.++.+||+|||+++.
T Consensus 82 L~~~l~----------~~~~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~ 148 (257)
T cd05060 82 LLKYLK----------KRREIPVSDLKELAHQVAMGMAYLES---KHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAG 148 (257)
T ss_pred HHHHHH----------hCCCCCHHHHHHHHHHHHHHHHHHhh---cCeeccCcccceEEEcCCCcEEeccccccceeecC
Confidence 999994 33478999999999999999999999 5699999999999999999999999998752
Q ss_pred ------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCCCCCChhh
Q 003594 616 ------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDL 670 (808)
Q Consensus 616 ------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~ 670 (808)
..++.++||||||+++|+|++ |.+||..... ......+........|..+
T Consensus 149 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~ 223 (257)
T cd05060 149 SDYYRATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG-----AEVIAMLESGERLPRPEEC 223 (257)
T ss_pred CcccccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH-----HHHHHHHHcCCcCCCCCCC
Confidence 224668999999999999998 9999865321 1122222223334556678
Q ss_pred HHHHHHHHHHhhccCCCcCccccHHhhHHHHHHH
Q 003594 671 AEELAGIALKCLSADQDANRDLRIAGVMKELDEV 704 (808)
Q Consensus 671 ~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l 704 (808)
+..+.+++.+||..+ |..||++.++++.|+.+
T Consensus 224 ~~~l~~li~~cl~~~--p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 224 PQEIYSIMLSCWKYR--PEDRPTFSELESTFRRD 255 (257)
T ss_pred CHHHHHHHHHHhcCC--hhhCcCHHHHHHHHHhc
Confidence 889999999999999 99999999999999875
No 57
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=2.3e-33 Score=296.87 Aligned_cols=218 Identities=22% Similarity=0.381 Sum_probs=179.9
Q ss_pred cccccCCceEEEEEEE-CCeEEEEEEccC-CCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCHHHH
Q 003594 468 RLKCAGDWTNVYRGRL-NHASVAIKTLNN-GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNLRDK 543 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~-~~~~vAiK~l~~-~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL~~~ 543 (808)
+.+|.|+||.||+|.+ ++..||+|.+.. ....+.+.+|+.+++.++||||+++++++.+ ..++||||+++|+|.++
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 91 (261)
T cd05072 12 KKLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYMAKGSLLDF 91 (261)
T ss_pred eecCCcCCceEEEEEecCCceEEEEEccCCchhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecCCCCcHHHH
Confidence 4567899999999998 567899999873 3345789999999999999999999998865 77999999999999999
Q ss_pred HhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--------
Q 003594 544 LFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-------- 615 (808)
Q Consensus 544 l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-------- 615 (808)
+... ....+++..++.++.|++.||.|||+ .+++||||||+||+++.++.+||+|||++..
T Consensus 92 l~~~--------~~~~~~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~ 160 (261)
T cd05072 92 LKSD--------EGGKVLLPKLIDFSAQIAEGMAYIER---KNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTA 160 (261)
T ss_pred HHHh--------cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhhEEecCCCcEEECCCccceecCCCceec
Confidence 9543 34568999999999999999999999 5699999999999999999999999999853
Q ss_pred ------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHHHHH
Q 003594 616 ------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAG 676 (808)
Q Consensus 616 ------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~ 676 (808)
..++.++|||||||++|+|+| |..||..... ......+......+.+..++..+.+
T Consensus 161 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (261)
T cd05072 161 REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSN-----SDVMSALQRGYRMPRMENCPDELYD 235 (261)
T ss_pred cCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCH-----HHHHHHHHcCCCCCCCCCCCHHHHH
Confidence 224568999999999999998 9999864211 1222222222233334467789999
Q ss_pred HHHHhhccCCCcCccccHHhhHHHHHH
Q 003594 677 IALKCLSADQDANRDLRIAGVMKELDE 703 (808)
Q Consensus 677 Li~~Cl~~dp~p~~Rps~~evl~~L~~ 703 (808)
++.+||..+ |..||++.++.+.|+.
T Consensus 236 li~~~l~~~--p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 236 IMKTCWKEK--AEERPTFDYLQSVLDD 260 (261)
T ss_pred HHHHHccCC--cccCcCHHHHHHHHhc
Confidence 999999999 9999999999999875
No 58
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=3e-33 Score=295.70 Aligned_cols=216 Identities=24% Similarity=0.421 Sum_probs=179.6
Q ss_pred cccccCCceEEEEEEECC-eEEEEEEccC-CCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCHHHH
Q 003594 468 RLKCAGDWTNVYRGRLNH-ASVAIKTLNN-GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNLRDK 543 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~~~-~~vAiK~l~~-~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL~~~ 543 (808)
..+|.|+||.||+|.+.+ ..||||.+.. ....+.|.+|+.++.+++||||++++++|.+ ..++||||+++|+|.++
T Consensus 10 ~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l~~~ 89 (256)
T cd05113 10 KELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMSNGCLLNY 89 (256)
T ss_pred eEecCcccceEEEEEecCCCcEEEEEcCCCcccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCCCCcHHHH
Confidence 456889999999999854 5699999873 3446789999999999999999999999865 67999999999999999
Q ss_pred HhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--------
Q 003594 544 LFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-------- 615 (808)
Q Consensus 544 l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-------- 615 (808)
+... ...++|..++.|+.||+.||.|||+ .+|+|+||||+|||++.++.+||+|||+++.
T Consensus 90 i~~~---------~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~ 157 (256)
T cd05113 90 LREH---------GKRFQPSQLLEMCKDVCEGMAYLES---KQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTS 157 (256)
T ss_pred HHhc---------CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCCEEECCCccceecCCCceee
Confidence 9532 2368999999999999999999999 6699999999999999999999999998642
Q ss_pred ------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHHHHH
Q 003594 616 ------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAG 676 (808)
Q Consensus 616 ------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~ 676 (808)
..++.++|||||||++|+|++ |..||..... ......+........+...+..+.+
T Consensus 158 ~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (256)
T cd05113 158 SVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNN-----SETVEKVSQGLRLYRPHLASEKVYA 232 (256)
T ss_pred cCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCH-----HHHHHHHhcCCCCCCCCCCCHHHHH
Confidence 235778999999999999999 9999864321 1222333443344445567889999
Q ss_pred HHHHhhccCCCcCccccHHhhHHHHH
Q 003594 677 IALKCLSADQDANRDLRIAGVMKELD 702 (808)
Q Consensus 677 Li~~Cl~~dp~p~~Rps~~evl~~L~ 702 (808)
++.+||..+ |..||++.+++..|+
T Consensus 233 li~~cl~~~--p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 233 IMYSCWHEK--AEERPTFQQLLSSIE 256 (256)
T ss_pred HHHHHcCCC--cccCCCHHHHHHhhC
Confidence 999999999 999999999998763
No 59
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=3.3e-33 Score=305.55 Aligned_cols=205 Identities=24% Similarity=0.315 Sum_probs=171.1
Q ss_pred ccccCCceEEEEEEE--CCeEEEEEEccC-----CCCHHHHHHHHHHHhcc-CCCCccceeecccc--ceEEEEeecCCC
Q 003594 469 LKCAGDWTNVYRGRL--NHASVAIKTLNN-----GLSEEDFQAKVSFLTAV-RHPHLVAVMGCCSE--LKCIVFEYMPNG 538 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~--~~~~vAiK~l~~-----~~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~~~lV~Ey~~~g 538 (808)
++|.|+||.||+|.+ ++..||||++.. ......+.+|..++..+ +||||+++++++.+ ..|+||||++||
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (318)
T cd05570 2 VLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNGG 81 (318)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 578999999999998 568999999872 22345677899999888 79999999999855 789999999999
Q ss_pred CHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc---
Q 003594 539 NLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC--- 615 (808)
Q Consensus 539 sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~--- 615 (808)
+|.+++. ....+++..+..|+.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 82 ~L~~~~~----------~~~~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 148 (318)
T cd05570 82 DLMFHIQ----------RSGRFDEPRARFYAAEIVLGLQFLHE---RGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGIL 148 (318)
T ss_pred CHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHh---CCeEccCCCHHHeEECCCCcEEecccCCCeecCc
Confidence 9999984 34579999999999999999999999 6699999999999999999999999998742
Q ss_pred ----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHH
Q 003594 616 ----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEE 673 (808)
Q Consensus 616 ----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~ 673 (808)
..++.++|||||||++|+|++|+.||..... ..+...+......+|..++..
T Consensus 149 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~------~~~~~~i~~~~~~~~~~~~~~ 222 (318)
T cd05570 149 GGVTTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDE------DELFQSILEDEVRYPRWLSKE 222 (318)
T ss_pred CCCcccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCH------HHHHHHHHcCCCCCCCcCCHH
Confidence 2467899999999999999999999965321 122222222334456678899
Q ss_pred HHHHHHHhhccCCCcCccccH
Q 003594 674 LAGIALKCLSADQDANRDLRI 694 (808)
Q Consensus 674 l~~Li~~Cl~~dp~p~~Rps~ 694 (808)
+.+|+.+||..| |..||++
T Consensus 223 ~~~li~~~l~~d--P~~R~s~ 241 (318)
T cd05570 223 AKSILKSFLTKN--PEKRLGC 241 (318)
T ss_pred HHHHHHHHccCC--HHHcCCC
Confidence 999999999999 9999998
No 60
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=2.8e-33 Score=300.16 Aligned_cols=228 Identities=25% Similarity=0.435 Sum_probs=182.3
Q ss_pred cccccccccccCCceEEEEEEE------CCeEEEEEEccCCC---CHHHHHHHHHHHhccCCCCccceeecccc----ce
Q 003594 462 DFSERFRLKCAGDWTNVYRGRL------NHASVAIKTLNNGL---SEEDFQAKVSFLTAVRHPHLVAVMGCCSE----LK 528 (808)
Q Consensus 462 ~f~~~~~i~g~G~~g~Vy~~~~------~~~~vAiK~l~~~~---~~~~~~~Ei~il~~l~HpnIv~l~g~~~~----~~ 528 (808)
.+....+++|.|+||.||++.+ ++..||+|.+.... ....|.+|+.+|++++||||++++++|.. ..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (283)
T cd05080 4 RYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGL 83 (283)
T ss_pred hhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceE
Confidence 3445557789999999988763 46789999997432 34678899999999999999999998753 47
Q ss_pred EEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEE
Q 003594 529 CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKIS 608 (808)
Q Consensus 529 ~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~ 608 (808)
++||||+++|+|.+++.. ..+++..++.|+.|++.||.|||+ .+|+||||||+|||++.++.+||+
T Consensus 84 ~lv~e~~~~~~l~~~~~~-----------~~l~~~~~~~i~~~l~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~ 149 (283)
T cd05080 84 QLIMEYVPLGSLRDYLPK-----------HKLNLAQLLLFAQQICEGMAYLHS---QHYIHRDLAARNVLLDNDRLVKIG 149 (283)
T ss_pred EEEecCCCCCCHHHHHHH-----------cCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccChheEEEcCCCcEEEe
Confidence 899999999999999942 348999999999999999999999 569999999999999999999999
Q ss_pred eCCCccc----------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHh---------hhc
Q 003594 609 GLGLNIC----------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAM---------ALD 651 (808)
Q Consensus 609 DfGla~~----------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~---------~~~ 651 (808)
|||++.. ..++.++||||||+++|+|+||..|+....... ...
T Consensus 150 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~ 229 (283)
T cd05080 150 DFGLAKAVPEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMT 229 (283)
T ss_pred ecccccccCCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccc
Confidence 9998742 235678999999999999999998875422100 001
Q ss_pred HHHHHHHhcc-CCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHHH
Q 003594 652 QTTLMQVLDG-NAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVR 705 (808)
Q Consensus 652 ~~~~~~~ld~-~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~ 705 (808)
...+...++. .....+..++..+.+++.+||+.+ |..||++.+++..|+.+.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~--p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 230 VVRLIELLERGMRLPCPKNCPQEVYILMKNCWETE--AKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hhhhhhhhhcCCCCCCCCCCCHHHHHHHHHHhccC--hhhCCCHHHHHHHHHHhh
Confidence 1112222221 223345567889999999999999 999999999999998874
No 61
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=4.2e-33 Score=298.62 Aligned_cols=220 Identities=19% Similarity=0.322 Sum_probs=179.9
Q ss_pred ccccccCCceEEEEEEE--CCe----EEEEEEccCCCC---HHHHHHHHHHHhccCCCCccceeecccc-ceEEEEeecC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHA----SVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE-LKCIVFEYMP 536 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~----~vAiK~l~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~-~~~lV~Ey~~ 536 (808)
.+.+|.|+||.||+|.+ +|. .|++|.+..... ...+..|+.++++++||||++++|++.+ ..++|+||++
T Consensus 12 ~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~~~~~~i~e~~~ 91 (279)
T cd05111 12 LKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPGASLQLVTQLSP 91 (279)
T ss_pred ccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECCCccEEEEEeCC
Confidence 35678999999999998 444 588888863322 2567788889999999999999999866 6789999999
Q ss_pred CCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-
Q 003594 537 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC- 615 (808)
Q Consensus 537 ~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~- 615 (808)
+|+|.+++.. ....++|..++.|+.||+.||.|||+ ++++||||||+|||++.++.+||+|||+++.
T Consensus 92 ~gsL~~~l~~---------~~~~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~ 159 (279)
T cd05111 92 LGSLLDHVRQ---------HRDSLDPQRLLNWCVQIAKGMYYLEE---HRMVHRNLAARNILLKSDSIVQIADFGVADLL 159 (279)
T ss_pred CCcHHHHHHh---------cccCCCHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEEcCCccceec
Confidence 9999999953 23568999999999999999999999 6699999999999999999999999998842
Q ss_pred --------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhc-cCCCCCC
Q 003594 616 --------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLD-GNAGIWP 667 (808)
Q Consensus 616 --------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld-~~~~~~p 667 (808)
..++.++|||||||++|||++ |..||..... .....++. ......+
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~------~~~~~~~~~~~~~~~~ 233 (279)
T cd05111 160 YPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRP------HEVPDLLEKGERLAQP 233 (279)
T ss_pred cCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCH------HHHHHHHHCCCcCCCC
Confidence 235678999999999999998 9999865321 22222232 2333344
Q ss_pred hhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHHHH
Q 003594 668 LDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVRK 706 (808)
Q Consensus 668 ~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~~ 706 (808)
..++..+.+++.+||..+ |..||++.++++.|..+.+
T Consensus 234 ~~~~~~~~~li~~c~~~~--p~~Rps~~el~~~l~~~~~ 270 (279)
T cd05111 234 QICTIDVYMVMVKCWMID--ENVRPTFKELANEFTRMAR 270 (279)
T ss_pred CCCCHHHHHHHHHHcCCC--cccCcCHHHHHHHHHHHHh
Confidence 556778999999999999 9999999999999988764
No 62
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.6e-33 Score=301.59 Aligned_cols=226 Identities=25% Similarity=0.464 Sum_probs=182.7
Q ss_pred cccccCCceEEEEEEECC-------eEEEEEEccCCCC---HHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeec
Q 003594 468 RLKCAGDWTNVYRGRLNH-------ASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYM 535 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~~~-------~~vAiK~l~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~ 535 (808)
+.+|+|+||.||+|.+.+ ..||+|.+..... ...|.+|+.++.+++||||+++++++.+ ..+++|||+
T Consensus 11 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~ 90 (283)
T cd05048 11 EELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTCMLFEYL 90 (283)
T ss_pred hcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceEEEEecC
Confidence 456789999999998732 5799999974332 3568999999999999999999999865 689999999
Q ss_pred CCCCHHHHHhhccccccc------cccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEe
Q 003594 536 PNGNLRDKLFTSQRNYKN------CSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISG 609 (808)
Q Consensus 536 ~~gsL~~~l~~~~~~~~~------~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~D 609 (808)
++|+|.+++......... ......+++..++.++.||+.||.|||+ .+|+||||||+|||++.++.+||+|
T Consensus 91 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~---~~i~H~dlkp~Nil~~~~~~~~L~d 167 (283)
T cd05048 91 AHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSS---HHFVHRDLAARNCLVGEGLTVKISD 167 (283)
T ss_pred CCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccccceEEEcCCCcEEECC
Confidence 999999999654211000 0112568999999999999999999999 5699999999999999999999999
Q ss_pred CCCccc---------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhcc
Q 003594 610 LGLNIC---------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDG 661 (808)
Q Consensus 610 fGla~~---------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~ 661 (808)
||++.. ..++.++|||||||++|||++ |..||..... ......+...
T Consensus 168 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~-----~~~~~~i~~~ 242 (283)
T cd05048 168 FGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN-----QEVIEMIRSR 242 (283)
T ss_pred CcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHHHHcC
Confidence 998742 235778999999999999998 9999864321 1222333344
Q ss_pred CCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHH
Q 003594 662 NAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDE 703 (808)
Q Consensus 662 ~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~ 703 (808)
.....|..++..+.+|+.+||+.| |..||++.+|++.|+.
T Consensus 243 ~~~~~~~~~~~~~~~l~~~c~~~~--p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 243 QLLPCPEDCPARVYALMIECWNEI--PARRPRFKDIHTRLRS 282 (283)
T ss_pred CcCCCcccCCHHHHHHHHHHccCC--hhhCcCHHHHHHHHhc
Confidence 445567788999999999999999 9999999999999874
No 63
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=7.2e-34 Score=311.67 Aligned_cols=211 Identities=22% Similarity=0.265 Sum_probs=175.1
Q ss_pred ccccCCceEEEEEEE--CCeEEEEEEccCC-----CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCC
Q 003594 469 LKCAGDWTNVYRGRL--NHASVAIKTLNNG-----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGN 539 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gs 539 (808)
++|+|+||.||++.. +|..||+|++... .....+..|+.++..++||||+++++++.+ ..||||||+++|+
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~~ 81 (325)
T cd05594 2 LLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGE 81 (325)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCCc
Confidence 578999999999997 6789999999731 223567889999999999999999998865 7899999999999
Q ss_pred HHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc----
Q 003594 540 LRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC---- 615 (808)
Q Consensus 540 L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~---- 615 (808)
|.+++. ....+++..+..|+.||+.||.|||+. .+|+||||||+|||++.++.+||+|||+++.
T Consensus 82 L~~~l~----------~~~~l~~~~~~~~~~qi~~aL~~lH~~--~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~ 149 (325)
T cd05594 82 LFFHLS----------RERVFSEDRARFYGAEIVSALDYLHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKD 149 (325)
T ss_pred HHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCCCCeEEECCCCCEEEecCCCCeecCCC
Confidence 999883 345789999999999999999999972 3699999999999999999999999998742
Q ss_pred ---------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHHH
Q 003594 616 ---------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEEL 674 (808)
Q Consensus 616 ---------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l 674 (808)
..++.++|||||||++|+|+||+.||.... .......+......+|...+.++
T Consensus 150 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~------~~~~~~~i~~~~~~~p~~~~~~~ 223 (325)
T cd05594 150 GATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQD------HEKLFELILMEEIRFPRTLSPEA 223 (325)
T ss_pred CcccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCC------HHHHHHHHhcCCCCCCCCCCHHH
Confidence 246789999999999999999999996422 12222223333445666788999
Q ss_pred HHHHHHhhccCCCcCccc-----cHHhhHH
Q 003594 675 AGIALKCLSADQDANRDL-----RIAGVMK 699 (808)
Q Consensus 675 ~~Li~~Cl~~dp~p~~Rp-----s~~evl~ 699 (808)
.+|+.+||+.| |..|+ ++.++++
T Consensus 224 ~~li~~~L~~d--P~~R~~~~~~~~~~il~ 251 (325)
T cd05594 224 KSLLSGLLKKD--PKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred HHHHHHHhhcC--HHHhCCCCCCCHHHHhc
Confidence 99999999999 88996 7777764
No 64
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=3.5e-33 Score=298.76 Aligned_cols=222 Identities=21% Similarity=0.354 Sum_probs=182.1
Q ss_pred ccccccCCceEEEEEEE--CCe----EEEEEEccCCCC---HHHHHHHHHHHhccCCCCccceeecccc-ceEEEEeecC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHA----SVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE-LKCIVFEYMP 536 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~----~vAiK~l~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~-~~~lV~Ey~~ 536 (808)
.+.+|.|+||.||+|.+ +|. .||+|++..... ...+.+|+.++..++||||++++++|.. ..+++|+|++
T Consensus 12 ~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~l~~~~~~ 91 (279)
T cd05109 12 VKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTSTVQLVTQLMP 91 (279)
T ss_pred eeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCCCcEEEEEcCC
Confidence 35678999999999987 443 589999873322 3578899999999999999999999966 6789999999
Q ss_pred CCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-
Q 003594 537 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC- 615 (808)
Q Consensus 537 ~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~- 615 (808)
+|+|.+++.. ....+++..++.++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 92 ~g~l~~~l~~---------~~~~~~~~~~~~~~~qi~~~L~~lH~---~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~ 159 (279)
T cd05109 92 YGCLLDYVRE---------NKDRIGSQDLLNWCVQIAKGMSYLEE---VRLVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (279)
T ss_pred CCCHHHHHhh---------ccCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccccceEEEcCCCcEEECCCCceeec
Confidence 9999999953 23568999999999999999999999 6699999999999999999999999998742
Q ss_pred --------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhc-cCCCCCC
Q 003594 616 --------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLD-GNAGIWP 667 (808)
Q Consensus 616 --------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld-~~~~~~p 667 (808)
..++.++|||||||++|||++ |.+||.... .......+. ......+
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~------~~~~~~~~~~~~~~~~~ 233 (279)
T cd05109 160 DIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIP------AREIPDLLEKGERLPQP 233 (279)
T ss_pred ccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCC------HHHHHHHHHCCCcCCCC
Confidence 235678999999999999998 899986422 122222222 2333445
Q ss_pred hhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHHHHhc
Q 003594 668 LDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVRKKA 708 (808)
Q Consensus 668 ~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~~~~ 708 (808)
..++..+.+++.+||..| |..||++.+++..|+.+....
T Consensus 234 ~~~~~~~~~li~~~l~~d--p~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 234 PICTIDVYMIMVKCWMID--SECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred ccCCHHHHHHHHHHcCCC--hhhCcCHHHHHHHHHHhhcCC
Confidence 567889999999999999 999999999999998876543
No 65
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=1.6e-33 Score=311.12 Aligned_cols=215 Identities=21% Similarity=0.270 Sum_probs=175.6
Q ss_pred cccccccccccCCceEEEEEEEC---CeEEEEEEccC-----CCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEE
Q 003594 462 DFSERFRLKCAGDWTNVYRGRLN---HASVAIKTLNN-----GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIV 531 (808)
Q Consensus 462 ~f~~~~~i~g~G~~g~Vy~~~~~---~~~vAiK~l~~-----~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV 531 (808)
+|.. .+.+|.|+||.||+|.+. +..||+|++.. ....+.+.+|+.++..++|||||++++++.+ ..|+|
T Consensus 31 ~y~~-~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv 109 (340)
T PTZ00426 31 DFNF-IRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYLV 109 (340)
T ss_pred hcEE-EEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEEE
Confidence 3443 356789999999999872 36899999862 2234678899999999999999999999966 68999
Q ss_pred EeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCC
Q 003594 532 FEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLG 611 (808)
Q Consensus 532 ~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfG 611 (808)
|||+++|+|.+++. ....+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 110 ~Ey~~~g~L~~~i~----------~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~ikL~DFG 176 (340)
T PTZ00426 110 LEFVIGGEFFTFLR----------RNKRFPNDVGCFYAAQIVLIFEYLQS---LNIVYRDLKPENLLLDKDGFIKMTDFG 176 (340)
T ss_pred EeCCCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEecCC
Confidence 99999999999994 34568999999999999999999999 669999999999999999999999999
Q ss_pred Cccc----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChh
Q 003594 612 LNIC----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLD 669 (808)
Q Consensus 612 la~~----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~ 669 (808)
++.. ..++.++|||||||++|+|++|.+||..... ......+.. ....+|..
T Consensus 177 ~a~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~-----~~~~~~i~~-~~~~~p~~ 250 (340)
T PTZ00426 177 FAKVVDTRTYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEP-----LLIYQKILE-GIIYFPKF 250 (340)
T ss_pred CCeecCCCcceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCH-----HHHHHHHhc-CCCCCCCC
Confidence 9853 2367899999999999999999999975321 122223333 23345667
Q ss_pred hHHHHHHHHHHhhccCCCcCccc-----cHHhhH
Q 003594 670 LAEELAGIALKCLSADQDANRDL-----RIAGVM 698 (808)
Q Consensus 670 ~~~~l~~Li~~Cl~~dp~p~~Rp-----s~~evl 698 (808)
.+..+.+++.+||+.| |..|+ ++.+++
T Consensus 251 ~~~~~~~li~~~l~~d--p~~R~~~~~~~~~~~~ 282 (340)
T PTZ00426 251 LDNNCKHLMKKLLSHD--LTKRYGNLKKGAQNVK 282 (340)
T ss_pred CCHHHHHHHHHHcccC--HHHcCCCCCCCHHHHH
Confidence 7889999999999999 88885 666654
No 66
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=3.7e-33 Score=296.57 Aligned_cols=224 Identities=22% Similarity=0.400 Sum_probs=183.7
Q ss_pred ccccccCCceEEEEEEEC-----CeEEEEEEccCC-CC---HHHHHHHHHHHhccCCCCccceeecccc--------ceE
Q 003594 467 FRLKCAGDWTNVYRGRLN-----HASVAIKTLNNG-LS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--------LKC 529 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~~-----~~~vAiK~l~~~-~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~--------~~~ 529 (808)
.+++|+|+||.||+|.+. +..||||.+... .. ...+.+|+.+++.++||||+++++++.. ..+
T Consensus 4 ~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~ 83 (273)
T cd05035 4 GKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIPKPM 83 (273)
T ss_pred ccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCcccE
Confidence 356789999999999972 267999998732 22 3578999999999999999999998743 368
Q ss_pred EEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEe
Q 003594 530 IVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISG 609 (808)
Q Consensus 530 lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~D 609 (808)
+||||+++|+|..++...... .....+++.....++.|++.||.|||+ .+|+||||||+||++++++.+||+|
T Consensus 84 ~v~e~~~~~~l~~~l~~~~~~----~~~~~~~~~~~~~~~~~i~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~d 156 (273)
T cd05035 84 VILPFMKHGDLHSFLLYSRLG----GLPEKLPLQTLLKFMVDIALGMEYLSN---RNFIHRDLAARNCMLREDMTVCVAD 156 (273)
T ss_pred EEEeccCCCCHHHHHHHhhcc----CCcccCCHHHHHHHHHHHHHHHHHHHh---CCeeccccchheEEECCCCeEEECC
Confidence 999999999999999654210 123468999999999999999999999 5699999999999999999999999
Q ss_pred CCCccc---------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhcc
Q 003594 610 LGLNIC---------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDG 661 (808)
Q Consensus 610 fGla~~---------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~ 661 (808)
||+++. ..++.++|||||||++|||++ |.+||..... ...+..+..+
T Consensus 157 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~-----~~~~~~~~~~ 231 (273)
T cd05035 157 FGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN-----HEIYDYLRHG 231 (273)
T ss_pred ccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHcC
Confidence 999753 235678999999999999999 8888865321 2233444444
Q ss_pred CCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHH
Q 003594 662 NAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEV 704 (808)
Q Consensus 662 ~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l 704 (808)
.....|..++..+.+++.+||+.| |..||++.++++.|+.+
T Consensus 232 ~~~~~~~~~~~~~~~li~~~l~~~--p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 232 NRLKQPEDCLDELYDLMYSCWRAD--PKDRPTFTKLREVLENI 272 (273)
T ss_pred CCCCCCcCCCHHHHHHHHHHcCCC--hhhCcCHHHHHHHHHhh
Confidence 455566778899999999999999 99999999999999875
No 67
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=3.6e-33 Score=296.39 Aligned_cols=224 Identities=27% Similarity=0.429 Sum_probs=183.8
Q ss_pred ccccccccccccCCceEEEEEEEC-----CeEEEEEEccCCCC---HHHHHHHHHHHhccCCCCccceeecccc--ceEE
Q 003594 461 EDFSERFRLKCAGDWTNVYRGRLN-----HASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCI 530 (808)
Q Consensus 461 ~~f~~~~~i~g~G~~g~Vy~~~~~-----~~~vAiK~l~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~l 530 (808)
++|... ..+|.|+||.||+|.+. ...||||.+..... ...|.+|+.++.+++||||+++++++.+ ..++
T Consensus 4 ~~~~~~-~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i 82 (266)
T cd05033 4 SYVTIE-KVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMI 82 (266)
T ss_pred HHceee-eEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEE
Confidence 345543 45678999999999983 35799999874322 3578899999999999999999999855 7899
Q ss_pred EEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeC
Q 003594 531 VFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGL 610 (808)
Q Consensus 531 V~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~Df 610 (808)
||||+++|+|.+++... ...+++..++.++.|++.||.|||+ .+|+||||||+|||++.++.++|+||
T Consensus 83 v~e~~~~~~L~~~~~~~---------~~~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~di~p~nili~~~~~~~l~df 150 (266)
T cd05033 83 ITEYMENGSLDKFLREN---------DGKFTVGQLVGMLRGIASGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDF 150 (266)
T ss_pred EEEcCCCCCHHHHHHhc---------cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCcceEEEcCCCCEEECcc
Confidence 99999999999999532 3478999999999999999999999 56999999999999999999999999
Q ss_pred CCccc---------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccC
Q 003594 611 GLNIC---------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGN 662 (808)
Q Consensus 611 Gla~~---------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~ 662 (808)
|++.. ..++.++||||||+++|+|++ |..||.... .......+....
T Consensus 151 g~~~~~~~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~-----~~~~~~~~~~~~ 225 (266)
T cd05033 151 GLSRRLEDSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMS-----NQDVIKAVEDGY 225 (266)
T ss_pred chhhcccccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCC-----HHHHHHHHHcCC
Confidence 98743 234678999999999999998 999985421 122233333334
Q ss_pred CCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHH
Q 003594 663 AGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEV 704 (808)
Q Consensus 663 ~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l 704 (808)
..+.+..++..+.+|+.+||+.+ |..||++.+|++.|+.+
T Consensus 226 ~~~~~~~~~~~l~~li~~cl~~~--p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 226 RLPPPMDCPSALYQLMLDCWQKD--RNERPTFSQIVSTLDKM 265 (266)
T ss_pred CCCCCCCCCHHHHHHHHHHcCCC--cccCcCHHHHHHHHHhh
Confidence 44556678899999999999999 99999999999999875
No 68
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=4e-33 Score=294.51 Aligned_cols=215 Identities=24% Similarity=0.395 Sum_probs=179.1
Q ss_pred cccccCCceEEEEEEE-CCeEEEEEEccC-CCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCHHHH
Q 003594 468 RLKCAGDWTNVYRGRL-NHASVAIKTLNN-GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNLRDK 543 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~-~~~~vAiK~l~~-~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL~~~ 543 (808)
+.+|+|+||.||+|.+ .+..+|+|.+.. ......|.+|+.+++.++||||+++++++.+ ..++||||+++++|.++
T Consensus 10 ~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 89 (256)
T cd05059 10 KELGSGQFGVVHLGKWRGKIDVAIKMIREGAMSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMANGCLLNY 89 (256)
T ss_pred hhhccCCCceEEEeEecCCccEEEEEeccCCCCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCCCCHHHH
Confidence 4568899999999998 456899999873 3445689999999999999999999999865 78999999999999999
Q ss_pred HhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--------
Q 003594 544 LFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-------- 615 (808)
Q Consensus 544 l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-------- 615 (808)
+... ...++|..++.|+.||+.||.|||+ .+|+||||||+||+++.++.+||+|||+++.
T Consensus 90 l~~~---------~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~ 157 (256)
T cd05059 90 LRER---------KGKLGTEWLLDMCSDVCEAMEYLES---NGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTS 157 (256)
T ss_pred HHhc---------ccCCCHHHHHHHHHHHHHHHHHHHH---CCcccccccHhhEEECCCCcEEECCcccceecccccccc
Confidence 9532 3468999999999999999999999 5699999999999999999999999998742
Q ss_pred ------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHHHHH
Q 003594 616 ------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAG 676 (808)
Q Consensus 616 ------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~ 676 (808)
..++.++||||||+++|+|++ |++||..... ......+........|..++..+.+
T Consensus 158 ~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (256)
T cd05059 158 SQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSN-----SEVVESVSAGYRLYRPKLAPTEVYT 232 (256)
T ss_pred cCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCH-----HHHHHHHHcCCcCCCCCCCCHHHHH
Confidence 235678999999999999999 8999864322 1222223323334556678899999
Q ss_pred HHHHhhccCCCcCccccHHhhHHHH
Q 003594 677 IALKCLSADQDANRDLRIAGVMKEL 701 (808)
Q Consensus 677 Li~~Cl~~dp~p~~Rps~~evl~~L 701 (808)
++.+||..+ |..||++.++++.|
T Consensus 233 li~~cl~~~--p~~Rpt~~~~l~~l 255 (256)
T cd05059 233 IMYSCWHEK--PEDRPAFKKLLSQL 255 (256)
T ss_pred HHHHHhcCC--hhhCcCHHHHHHHh
Confidence 999999999 99999999999876
No 69
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=4e-33 Score=295.17 Aligned_cols=218 Identities=28% Similarity=0.465 Sum_probs=180.7
Q ss_pred cccccCCceEEEEEEE-CCeEEEEEEccC-CCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCHHHH
Q 003594 468 RLKCAGDWTNVYRGRL-NHASVAIKTLNN-GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNLRDK 543 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~-~~~~vAiK~l~~-~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL~~~ 543 (808)
+.+|.|+||.||+|.+ ++..||+|.+.. ....+.|.+|+.++++++||||+++++++.. ..++||||+++++|.++
T Consensus 12 ~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~ 91 (261)
T cd05068 12 RKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTMDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELMKYGSLLEY 91 (261)
T ss_pred EEecccCCccEEEEEecCCeEEEEEeeCCCcccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecccCCcHHHH
Confidence 5668899999999998 557899999973 3346789999999999999999999999865 68999999999999999
Q ss_pred HhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--------
Q 003594 544 LFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-------- 615 (808)
Q Consensus 544 l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-------- 615 (808)
+... ....++|..+..++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||++..
T Consensus 92 ~~~~--------~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~ 160 (261)
T cd05068 92 LQGG--------AGRALKLPQLIDMAAQVASGMAYLEA---QNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEA 160 (261)
T ss_pred Hhcc--------CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcccc
Confidence 9532 23468999999999999999999999 5699999999999999999999999998742
Q ss_pred ------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHHHHH
Q 003594 616 ------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAG 676 (808)
Q Consensus 616 ------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~ 676 (808)
..++.++||||||+++|+|+| |+.||..... ...+..+........+...+..+.+
T Consensus 161 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (261)
T cd05068 161 REGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN-----AEVLQQVDQGYRMPCPPGCPKELYD 235 (261)
T ss_pred cCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCH-----HHHHHHHHcCCCCCCCCcCCHHHHH
Confidence 124678999999999999999 9999864211 1122222222233445567889999
Q ss_pred HHHHhhccCCCcCccccHHhhHHHHHH
Q 003594 677 IALKCLSADQDANRDLRIAGVMKELDE 703 (808)
Q Consensus 677 Li~~Cl~~dp~p~~Rps~~evl~~L~~ 703 (808)
++.+||+.+ |..||++.+++..|+.
T Consensus 236 li~~~l~~~--P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 236 IMLDCWKED--PDDRPTFETLQWKLED 260 (261)
T ss_pred HHHHHhhcC--cccCCCHHHHHHHHhc
Confidence 999999999 9999999999999875
No 70
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=7.4e-34 Score=282.07 Aligned_cols=228 Identities=19% Similarity=0.250 Sum_probs=187.7
Q ss_pred cccccccccCCceEEEEEEE--CCeEEEEEEcc--CCCCHHHHHHHHHHHhccCCCCccceeecccc-------ceEEEE
Q 003594 464 SERFRLKCAGDWTNVYRGRL--NHASVAIKTLN--NGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE-------LKCIVF 532 (808)
Q Consensus 464 ~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~--~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-------~~~lV~ 532 (808)
+...+.+|.|||+.||.+.. ++..+|+|++. ...+.+..++|++..++++|||++++++++.. ..||++
T Consensus 23 yri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~yll~ 102 (302)
T KOG2345|consen 23 YRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEAYLLL 102 (302)
T ss_pred EEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeEEEEe
Confidence 34456778999999999986 78999999987 33556789999999999999999999998732 579999
Q ss_pred eecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCC
Q 003594 533 EYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 612 (808)
Q Consensus 533 Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGl 612 (808)
+|...|||.+.+.... .....+++.+.+.|+.+|++||.+||+.. .+++||||||+|||+.+.+.++|.|||.
T Consensus 103 Pyy~~Gsl~d~i~~~k------~kg~~~sE~~iL~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls~~~~~vl~D~GS 175 (302)
T KOG2345|consen 103 PYYKRGSLLDEIERLK------IKGNFVSEAQILWIFLGICRGLEALHEKE-PPYAHRDIKPANILLSDSGLPVLMDLGS 175 (302)
T ss_pred ehhccccHHHHHHHHh------hcCCccCHHHHHHHHHHHHHHHHHHhccC-CcccccCCCcceeEecCCCceEEEeccC
Confidence 9999999999997653 34567999999999999999999999977 4799999999999999999999999999
Q ss_pred ccc-------------------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHH
Q 003594 613 NIC-------------------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTL 655 (808)
Q Consensus 613 a~~-------------------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~ 655 (808)
+.. ...+.++|||||||+||.|+.|..||+..... .....
T Consensus 176 ~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~---GgSla 252 (302)
T KOG2345|consen 176 ATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQ---GGSLA 252 (302)
T ss_pred ccccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhc---CCeEE
Confidence 753 23689999999999999999999999865331 00111
Q ss_pred HHHhccCCCCCC--hhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHH
Q 003594 656 MQVLDGNAGIWP--LDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEV 704 (808)
Q Consensus 656 ~~~ld~~~~~~p--~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l 704 (808)
..+..+ ...+| ..+++.+.+||..||+.| |..||++.+++..++.+
T Consensus 253 LAv~n~-q~s~P~~~~yse~l~~lik~mlqvd--P~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 253 LAVQNA-QISIPNSSRYSEALHQLIKSMLQVD--PNQRPTIPELLSKLDDL 300 (302)
T ss_pred Eeeecc-ccccCCCCCccHHHHHHHHHHhcCC--cccCCCHHHHHHHHHhh
Confidence 111121 11222 238899999999999999 99999999999988765
No 71
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=1.9e-33 Score=308.11 Aligned_cols=211 Identities=24% Similarity=0.318 Sum_probs=173.7
Q ss_pred cccccCCceEEEEEEE-----CCeEEEEEEccCC------CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEee
Q 003594 468 RLKCAGDWTNVYRGRL-----NHASVAIKTLNNG------LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEY 534 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~-----~~~~vAiK~l~~~------~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey 534 (808)
+.+|+|+||.||++.. +++.||||++... .....+.+|+.+|..++||||++++++|.. ..|+||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 4578999999999986 4688999998721 223467889999999999999999999865 78999999
Q ss_pred cCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCcc
Q 003594 535 MPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNI 614 (808)
Q Consensus 535 ~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~ 614 (808)
+++|+|.+++. ....+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+++
T Consensus 82 ~~~~~L~~~~~----------~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~ 148 (323)
T cd05584 82 LSGGELFMHLE----------REGIFMEDTACFYLSEISLALEHLHQ---QGIIYRDLKPENILLDAQGHVKLTDFGLCK 148 (323)
T ss_pred CCCchHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEeeCcCCe
Confidence 99999999994 34568889999999999999999999 569999999999999999999999999874
Q ss_pred c-------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChh
Q 003594 615 C-------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLD 669 (808)
Q Consensus 615 ~-------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~ 669 (808)
. ..++.++|||||||++|||++|++||..... ...+..+... ...+|..
T Consensus 149 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~-----~~~~~~~~~~-~~~~~~~ 222 (323)
T cd05584 149 ESIHEGTVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENR-----KKTIDKILKG-KLNLPPY 222 (323)
T ss_pred ecccCCCcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCH-----HHHHHHHHcC-CCCCCCC
Confidence 2 1356789999999999999999999975322 1223333332 3456667
Q ss_pred hHHHHHHHHHHhhccCCCcCccc-----cHHhhHH
Q 003594 670 LAEELAGIALKCLSADQDANRDL-----RIAGVMK 699 (808)
Q Consensus 670 ~~~~l~~Li~~Cl~~dp~p~~Rp-----s~~evl~ 699 (808)
++..+.+|+.+||+.| |..|| ++.+++.
T Consensus 223 ~~~~~~~li~~~l~~~--p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 223 LTPEARDLLKKLLKRN--PSSRLGAGPGDAAEVQS 255 (323)
T ss_pred CCHHHHHHHHHHcccC--HhHcCCCCCCCHHHHhc
Confidence 8899999999999999 99999 5555543
No 72
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=3.8e-33 Score=298.18 Aligned_cols=233 Identities=21% Similarity=0.331 Sum_probs=184.1
Q ss_pred hhccccccccccccCCceEEEEEEEC-------CeEEEEEEccCCCC---HHHHHHHHHHHhccCCCCccceeecccc--
Q 003594 459 ATEDFSERFRLKCAGDWTNVYRGRLN-------HASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE-- 526 (808)
Q Consensus 459 at~~f~~~~~i~g~G~~g~Vy~~~~~-------~~~vAiK~l~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~-- 526 (808)
++++|... ..+|+|+||.||+|.+. +..||||++..... ...|.+|+.+++.++||||+++++++.+
T Consensus 4 ~~~~~~~~-~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~ 82 (277)
T cd05062 4 AREKITMS-RELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQ 82 (277)
T ss_pred cHHHceee-eeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 34556555 45578999999999863 35799999873322 3468899999999999999999999865
Q ss_pred ceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEE
Q 003594 527 LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAK 606 (808)
Q Consensus 527 ~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~k 606 (808)
..++||||+++|+|.+++...............++|..++.++.|++.||.|||+ .+++||||||+|||++.++.+|
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~~vH~dlkp~Nil~~~~~~~~ 159 (277)
T cd05062 83 PTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVK 159 (277)
T ss_pred CeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCcchheEEEcCCCCEE
Confidence 7899999999999999996532111100113457899999999999999999999 5699999999999999999999
Q ss_pred EEeCCCccc---------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHH
Q 003594 607 ISGLGLNIC---------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQV 658 (808)
Q Consensus 607 l~DfGla~~---------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ 658 (808)
|+|||++.. ..++.++|||||||++|||++ |.+||.... .......+
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~-----~~~~~~~~ 234 (277)
T cd05062 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMS-----NEQVLRFV 234 (277)
T ss_pred ECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCC-----HHHHHHHH
Confidence 999998742 235778999999999999999 688886431 12223333
Q ss_pred hccCCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHH
Q 003594 659 LDGNAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELD 702 (808)
Q Consensus 659 ld~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~ 702 (808)
........+..++..+.+++.+||+.+ |..||++.+++..|+
T Consensus 235 ~~~~~~~~~~~~~~~~~~li~~~l~~~--p~~Rps~~e~l~~l~ 276 (277)
T cd05062 235 MEGGLLDKPDNCPDMLFELMRMCWQYN--PKMRPSFLEIISSIK 276 (277)
T ss_pred HcCCcCCCCCCCCHHHHHHHHHHcCCC--hhhCcCHHHHHHHhh
Confidence 344444556677889999999999999 999999999998875
No 73
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=8.3e-33 Score=293.41 Aligned_cols=219 Identities=28% Similarity=0.399 Sum_probs=181.1
Q ss_pred cccccCCceEEEEEEEC-CeEEEEEEccC-CCCHHHHHHHHHHHhccCCCCccceeecccc-ceEEEEeecCCCCHHHHH
Q 003594 468 RLKCAGDWTNVYRGRLN-HASVAIKTLNN-GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE-LKCIVFEYMPNGNLRDKL 544 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~~-~~~vAiK~l~~-~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-~~~lV~Ey~~~gsL~~~l 544 (808)
+.+|.|+||.||+|.+. +..||+|++.. ....+.|.+|+.++..++||||+++++++.+ ..++||||+++|+|.+++
T Consensus 12 ~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~~ 91 (262)
T cd05071 12 VKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFL 91 (262)
T ss_pred eecCCCCCCcEEEEEecCCceEEEEecccCccCHHHHHHHHHHHHhCCCCCcceEEEEECCCCcEEEEEcCCCCcHHHHH
Confidence 45678999999999984 45799999984 4446789999999999999999999998755 789999999999999999
Q ss_pred hhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc---------
Q 003594 545 FTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC--------- 615 (808)
Q Consensus 545 ~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~--------- 615 (808)
... ....+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||++..
T Consensus 92 ~~~--------~~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~ 160 (262)
T cd05071 92 KGE--------MGKYLRLPQLVDMAAQIASGMAYVER---MNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTAR 160 (262)
T ss_pred hhc--------cccCCCHHHHHHHHHHHHHHHHHHHH---CCccccccCcccEEEcCCCcEEeccCCceeeccccccccc
Confidence 532 23468999999999999999999999 5699999999999999999999999998742
Q ss_pred -----------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHHHHHH
Q 003594 616 -----------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAGI 677 (808)
Q Consensus 616 -----------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~L 677 (808)
..++.++||||||+++|+|+| |.+||.... .......+........+..++..+.+|
T Consensus 161 ~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l~~l 235 (262)
T cd05071 161 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV-----NREVLDQVERGYRMPCPPECPESLHDL 235 (262)
T ss_pred cCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCC-----hHHHHHHHhcCCCCCCccccCHHHHHH
Confidence 234678999999999999999 888886432 112222333333334455678899999
Q ss_pred HHHhhccCCCcCccccHHhhHHHHHHH
Q 003594 678 ALKCLSADQDANRDLRIAGVMKELDEV 704 (808)
Q Consensus 678 i~~Cl~~dp~p~~Rps~~evl~~L~~l 704 (808)
+.+||+.+ |..||++.++++.|+..
T Consensus 236 i~~~l~~~--p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 236 MCQCWRKE--PEERPTFEYLQAFLEDY 260 (262)
T ss_pred HHHHccCC--cccCCCHHHHHHHHHHh
Confidence 99999999 99999999999998764
No 74
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=7.7e-33 Score=302.45 Aligned_cols=207 Identities=23% Similarity=0.302 Sum_probs=169.8
Q ss_pred ccccCCceEEEEEEE--CCeEEEEEEccCC-----CCHHHHHHHHHHHhcc-CCCCccceeecccc--ceEEEEeecCCC
Q 003594 469 LKCAGDWTNVYRGRL--NHASVAIKTLNNG-----LSEEDFQAKVSFLTAV-RHPHLVAVMGCCSE--LKCIVFEYMPNG 538 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-----~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~~~lV~Ey~~~g 538 (808)
.+|.|+||.||+|.+ ++..||||+++.. ...+.+..|..++..+ +||||+++++++.. ..|+||||++||
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~gg 81 (316)
T cd05592 2 VLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNGG 81 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 578999999999998 4688999998722 2234566777777654 89999999999855 789999999999
Q ss_pred CHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc---
Q 003594 539 NLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC--- 615 (808)
Q Consensus 539 sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~--- 615 (808)
+|.+++. ....+++..+..|+.||+.||.|||+ .+|+||||||+|||++.++.+||+|||++..
T Consensus 82 ~L~~~~~----------~~~~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~ 148 (316)
T cd05592 82 DLMFHIQ----------SSGRFDEARARFYAAEIICGLQFLHK---KGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMN 148 (316)
T ss_pred cHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHeEECCCCCEEEccCcCCeECCC
Confidence 9999984 34568999999999999999999999 5699999999999999999999999998752
Q ss_pred ----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHH
Q 003594 616 ----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEE 673 (808)
Q Consensus 616 ----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~ 673 (808)
..++.++|||||||++|+|++|+.||..... ..+...+....+.+|..++.+
T Consensus 149 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~------~~~~~~i~~~~~~~~~~~~~~ 222 (316)
T cd05592 149 GEGKASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE------DELFDSILNDRPHFPRWISKE 222 (316)
T ss_pred CCCccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCH------HHHHHHHHcCCCCCCCCCCHH
Confidence 2367889999999999999999999975321 112222223345566778889
Q ss_pred HHHHHHHhhccCCCcCccccHHh
Q 003594 674 LAGIALKCLSADQDANRDLRIAG 696 (808)
Q Consensus 674 l~~Li~~Cl~~dp~p~~Rps~~e 696 (808)
+.+|+.+||..| |..||++.+
T Consensus 223 ~~~ll~~~l~~~--P~~R~~~~~ 243 (316)
T cd05592 223 AKDCLSKLFERD--PTKRLGVDG 243 (316)
T ss_pred HHHHHHHHccCC--HHHcCCChH
Confidence 999999999999 999998753
No 75
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=6.2e-33 Score=298.60 Aligned_cols=230 Identities=25% Similarity=0.427 Sum_probs=184.8
Q ss_pred cccccCCceEEEEEEE-------CCeEEEEEEccCCC--CHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecC
Q 003594 468 RLKCAGDWTNVYRGRL-------NHASVAIKTLNNGL--SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMP 536 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~-------~~~~vAiK~l~~~~--~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~ 536 (808)
+.+|.|+||.||++.. ++..||+|.+.... ....+.+|+.++.+++||||++++++|.+ ..++||||++
T Consensus 11 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 90 (288)
T cd05093 11 RELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMK 90 (288)
T ss_pred cccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCC
Confidence 4567899999999985 23569999987332 24578999999999999999999999865 7899999999
Q ss_pred CCCHHHHHhhcccccc---ccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCc
Q 003594 537 NGNLRDKLFTSQRNYK---NCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 613 (808)
Q Consensus 537 ~gsL~~~l~~~~~~~~---~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla 613 (808)
+|+|.+++........ .......+++..++.++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||++
T Consensus 91 ~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~ 167 (288)
T cd05093 91 HGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVKIGDFGMS 167 (288)
T ss_pred CCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccCcceEEEccCCcEEeccCCcc
Confidence 9999999964321000 00123459999999999999999999999 66999999999999999999999999987
Q ss_pred cc---------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCCCC
Q 003594 614 IC---------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNAGI 665 (808)
Q Consensus 614 ~~---------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~~~ 665 (808)
.. ..++.++|||||||++|+|+| |.+||..... ......+.......
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~-----~~~~~~i~~~~~~~ 242 (288)
T cd05093 168 RDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN-----NEVIECITQGRVLQ 242 (288)
T ss_pred ccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHcCCcCC
Confidence 42 235778999999999999998 8999865321 12233333333344
Q ss_pred CChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHHHHh
Q 003594 666 WPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVRKK 707 (808)
Q Consensus 666 ~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~~~ 707 (808)
.+..++..+.+|+.+||+.| |..||++.+++..|+.+.+.
T Consensus 243 ~~~~~~~~l~~li~~~l~~~--p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 243 RPRTCPKEVYDLMLGCWQRE--PHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred CCCCCCHHHHHHHHHHccCC--hhhCCCHHHHHHHHHHHHHh
Confidence 45567789999999999999 99999999999999998764
No 76
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=2.4e-33 Score=306.95 Aligned_cols=207 Identities=21% Similarity=0.279 Sum_probs=171.6
Q ss_pred ccccCCceEEEEEEE--CCeEEEEEEccC-----CCCHHHHHHHHHHHhcc-CCCCccceeecccc--ceEEEEeecCCC
Q 003594 469 LKCAGDWTNVYRGRL--NHASVAIKTLNN-----GLSEEDFQAKVSFLTAV-RHPHLVAVMGCCSE--LKCIVFEYMPNG 538 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~--~~~~vAiK~l~~-----~~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~~~lV~Ey~~~g 538 (808)
++|+|+||.||+|.+ +++.||||++.. ......+..|..++..+ +||||+++++++.+ ..|+||||+++|
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~g 81 (320)
T cd05590 2 VLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNGG 81 (320)
T ss_pred eeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCCc
Confidence 578999999999998 578999999872 22345677898888877 69999999999865 789999999999
Q ss_pred CHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc---
Q 003594 539 NLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC--- 615 (808)
Q Consensus 539 sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~--- 615 (808)
+|.+++. ....+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 82 ~L~~~i~----------~~~~l~~~~~~~~~~ql~~~L~~lH~---~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~ 148 (320)
T cd05590 82 DLMFHIQ----------KSRRFDEARARFYAAEITSALMFLHD---KGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIF 148 (320)
T ss_pred hHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCc
Confidence 9999984 34568999999999999999999999 6699999999999999999999999998642
Q ss_pred ----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHH
Q 003594 616 ----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEE 673 (808)
Q Consensus 616 ----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~ 673 (808)
..++.++|||||||++|+|++|++||..... ...+..+. ......|...+.+
T Consensus 149 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~-----~~~~~~i~-~~~~~~~~~~~~~ 222 (320)
T cd05590 149 NGKTTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENE-----DDLFEAIL-NDEVVYPTWLSQD 222 (320)
T ss_pred CCCcccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH-----HHHHHHHh-cCCCCCCCCCCHH
Confidence 2357789999999999999999999975321 12222232 2334456668889
Q ss_pred HHHHHHHhhccCCCcCccccHHh
Q 003594 674 LAGIALKCLSADQDANRDLRIAG 696 (808)
Q Consensus 674 l~~Li~~Cl~~dp~p~~Rps~~e 696 (808)
+.+|+.+||+.| |..||++.+
T Consensus 223 ~~~li~~~L~~d--P~~R~~~~~ 243 (320)
T cd05590 223 AVDILKAFMTKN--PTMRLGSLT 243 (320)
T ss_pred HHHHHHHHcccC--HHHCCCCCC
Confidence 999999999999 999999744
No 77
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=5.1e-33 Score=293.32 Aligned_cols=218 Identities=26% Similarity=0.424 Sum_probs=182.4
Q ss_pred cccccCCceEEEEEEECCeEEEEEEccCCC-CHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCHHHHH
Q 003594 468 RLKCAGDWTNVYRGRLNHASVAIKTLNNGL-SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNLRDKL 544 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~~~~~vAiK~l~~~~-~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL~~~l 544 (808)
..+|.|+||.||+|...|+.||||.+.... ..+.+.+|+.++..++||||+++++++.+ ..++||||+++++|.+++
T Consensus 12 ~~ig~g~~g~v~~~~~~~~~v~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~~ 91 (256)
T cd05039 12 ATIGKGEFGDVMLGDYRGQKVAVKCLKDDSTAAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYMAKGSLVDYL 91 (256)
T ss_pred eeeecCCCceEEEEEecCcEEEEEEeccchhHHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEecCCCcHHHHH
Confidence 556889999999999999999999998443 35789999999999999999999999864 789999999999999999
Q ss_pred hhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc---------
Q 003594 545 FTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC--------- 615 (808)
Q Consensus 545 ~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~--------- 615 (808)
... ....++|..+..++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||++..
T Consensus 92 ~~~--------~~~~~~~~~~~~~~~qi~~~l~~lh~---~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~ 160 (256)
T cd05039 92 RSR--------GRAVITLAQQLGFALDVCEGMEYLEE---KNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGK 160 (256)
T ss_pred Hhc--------CCCCCCHHHHHHHHHHHHHHHHHHHh---CCccchhcccceEEEeCCCCEEEcccccccccccccccCC
Confidence 533 22368999999999999999999999 5699999999999999999999999998753
Q ss_pred -------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHHHHHHHHHh
Q 003594 616 -------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAGIALKC 681 (808)
Q Consensus 616 -------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~C 681 (808)
..++.++||||||+++|+|++ |..||..... ......+........+...+..+.+++.+|
T Consensus 161 ~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 235 (256)
T cd05039 161 LPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL-----KDVVPHVEKGYRMEAPEGCPPEVYKVMKDC 235 (256)
T ss_pred CcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCH-----HHHHHHHhcCCCCCCccCCCHHHHHHHHHH
Confidence 235678999999999999997 9999864321 111122222223344556789999999999
Q ss_pred hccCCCcCccccHHhhHHHHHH
Q 003594 682 LSADQDANRDLRIAGVMKELDE 703 (808)
Q Consensus 682 l~~dp~p~~Rps~~evl~~L~~ 703 (808)
|..+ |..||++.++++.|+.
T Consensus 236 l~~~--p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 236 WELD--PAKRPTFKQLREQLAL 255 (256)
T ss_pred hccC--hhhCcCHHHHHHHHhc
Confidence 9999 9999999999999875
No 78
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=2.5e-33 Score=306.91 Aligned_cols=204 Identities=23% Similarity=0.325 Sum_probs=168.9
Q ss_pred ccccCCceEEEEEEE--CCeEEEEEEccCC-----CCHHHHHHHHHHHhcc-CCCCccceeecccc--ceEEEEeecCCC
Q 003594 469 LKCAGDWTNVYRGRL--NHASVAIKTLNNG-----LSEEDFQAKVSFLTAV-RHPHLVAVMGCCSE--LKCIVFEYMPNG 538 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-----~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~~~lV~Ey~~~g 538 (808)
++|.|+||.||+|.+ +++.||||++... .....+..|..++..+ +||||+++++++.+ ..||||||+++|
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 81 (321)
T cd05591 2 VLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNGG 81 (321)
T ss_pred ccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCCC
Confidence 578999999999998 4689999998731 2235677899998876 79999999999865 789999999999
Q ss_pred CHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc---
Q 003594 539 NLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC--- 615 (808)
Q Consensus 539 sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~--- 615 (808)
+|.+++. ....+++..+..|+.||+.||.|||+ .+|+||||||+|||++.++.+||+|||++..
T Consensus 82 ~L~~~l~----------~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~ 148 (321)
T cd05591 82 DLMFQIQ----------RSRKFDEPRSRFYAAEVTLALMFLHR---HGVIYRDLKLDNILLDAEGHCKLADFGMCKEGIL 148 (321)
T ss_pred cHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEeecccceeccc
Confidence 9999984 34568999999999999999999999 5699999999999999999999999998742
Q ss_pred ----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHH
Q 003594 616 ----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEE 673 (808)
Q Consensus 616 ----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~ 673 (808)
..++.++|||||||++|+|+||++||..... ...+..+.. .....|..++.+
T Consensus 149 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~-----~~~~~~i~~-~~~~~p~~~~~~ 222 (321)
T cd05591 149 NGVTTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNE-----DDLFESILH-DDVLYPVWLSKE 222 (321)
T ss_pred CCccccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCH-----HHHHHHHHc-CCCCCCCCCCHH
Confidence 2467899999999999999999999975321 222233332 233455567889
Q ss_pred HHHHHHHhhccCCCcCcccc
Q 003594 674 LAGIALKCLSADQDANRDLR 693 (808)
Q Consensus 674 l~~Li~~Cl~~dp~p~~Rps 693 (808)
+.+|+.+||..| |..||+
T Consensus 223 ~~~ll~~~L~~d--p~~R~~ 240 (321)
T cd05591 223 AVSILKAFMTKN--PNKRLG 240 (321)
T ss_pred HHHHHHHHhccC--HHHcCC
Confidence 999999999999 999994
No 79
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=4.1e-33 Score=294.70 Aligned_cols=218 Identities=28% Similarity=0.445 Sum_probs=183.7
Q ss_pred cccccCCceEEEEEEE-CCeEEEEEEccCCC--CHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCHHH
Q 003594 468 RLKCAGDWTNVYRGRL-NHASVAIKTLNNGL--SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNLRD 542 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~-~~~~vAiK~l~~~~--~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL~~ 542 (808)
+.+|.|+||.||+|.+ ++..||+|.+.... ....+..|+.++..++||||+++++++.+ ..++||||+++|+|.+
T Consensus 12 ~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 91 (261)
T cd05148 12 RKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITELMEKGSLLA 91 (261)
T ss_pred hhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEeecccCCHHH
Confidence 4568899999999998 56899999998332 35679999999999999999999999865 7899999999999999
Q ss_pred HHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-------
Q 003594 543 KLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC------- 615 (808)
Q Consensus 543 ~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~------- 615 (808)
++... ....+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||++..
T Consensus 92 ~~~~~--------~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~ 160 (261)
T cd05148 92 FLRSP--------EGQVLPVASLIDMACQVAEGMAYLEE---QNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYL 160 (261)
T ss_pred HHhcC--------CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccCcceEEEcCCceEEEccccchhhcCCcccc
Confidence 99542 34568999999999999999999999 5699999999999999999999999998742
Q ss_pred ------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHHHHH
Q 003594 616 ------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAG 676 (808)
Q Consensus 616 ------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~ 676 (808)
..++.++||||||+++|+|++ |+.||.... ....+..+........+..++..+.+
T Consensus 161 ~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (261)
T cd05148 161 SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMN-----NHEVYDQITAGYRMPCPAKCPQEIYK 235 (261)
T ss_pred ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCC-----HHHHHHHHHhCCcCCCCCCCCHHHHH
Confidence 235678999999999999998 899986432 12233333344444556678899999
Q ss_pred HHHHhhccCCCcCccccHHhhHHHHHH
Q 003594 677 IALKCLSADQDANRDLRIAGVMKELDE 703 (808)
Q Consensus 677 Li~~Cl~~dp~p~~Rps~~evl~~L~~ 703 (808)
++.+||..| |..|||+.++++.|+.
T Consensus 236 ~i~~~l~~~--p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 236 IMLECWAAE--PEDRPSFKALREELDN 260 (261)
T ss_pred HHHHHcCCC--chhCcCHHHHHHHHhc
Confidence 999999999 9999999999999975
No 80
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=4.2e-33 Score=313.80 Aligned_cols=229 Identities=22% Similarity=0.362 Sum_probs=182.2
Q ss_pred cccccCCceEEEEEEEC-------CeEEEEEEccCCCC---HHHHHHHHHHHhccC-CCCccceeecccc--ceEEEEee
Q 003594 468 RLKCAGDWTNVYRGRLN-------HASVAIKTLNNGLS---EEDFQAKVSFLTAVR-HPHLVAVMGCCSE--LKCIVFEY 534 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~~-------~~~vAiK~l~~~~~---~~~~~~Ei~il~~l~-HpnIv~l~g~~~~--~~~lV~Ey 534 (808)
+++|.|+||.||+|.+. +..||||++..... .+.|.+|+.+|+++. |||||+++|+|.+ ..||||||
T Consensus 43 ~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~~~lv~Ey 122 (400)
T cd05105 43 RILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGPIYIITEY 122 (400)
T ss_pred heecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCceEEEEEe
Confidence 56789999999999862 24699999974322 357899999999996 9999999999965 78999999
Q ss_pred cCCCCHHHHHhhcccccc--------------------------------------------------------------
Q 003594 535 MPNGNLRDKLFTSQRNYK-------------------------------------------------------------- 552 (808)
Q Consensus 535 ~~~gsL~~~l~~~~~~~~-------------------------------------------------------------- 552 (808)
|++|+|.++|........
T Consensus 123 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (400)
T cd05105 123 CFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEASKYSD 202 (400)
T ss_pred cCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhhhhhhhhh
Confidence 999999999965321000
Q ss_pred ------------------------ccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEE
Q 003594 553 ------------------------NCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKIS 608 (808)
Q Consensus 553 ------------------------~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~ 608 (808)
.......+++..++.++.||+.||.|||+ .+|+||||||+|||++.++.+||+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~dikp~Nill~~~~~~kL~ 279 (400)
T cd05105 203 IQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLAS---KNCVHRDLAARNVLLAQGKIVKIC 279 (400)
T ss_pred cccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChHhEEEeCCCEEEEE
Confidence 00012358999999999999999999999 569999999999999999999999
Q ss_pred eCCCccc---------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhc
Q 003594 609 GLGLNIC---------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLD 660 (808)
Q Consensus 609 DfGla~~---------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld 660 (808)
|||+++. ..++.++|||||||++|+|++ |..||..... +......+..
T Consensus 280 DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~----~~~~~~~~~~ 355 (400)
T cd05105 280 DFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIV----DSTFYNKIKS 355 (400)
T ss_pred eCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccch----hHHHHHHHhc
Confidence 9998742 235788999999999999997 8888864211 1112222333
Q ss_pred cCCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHHH
Q 003594 661 GNAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVR 705 (808)
Q Consensus 661 ~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~ 705 (808)
......+..++..+.+++.+||+.+ |..||++.+|.+.|+.+.
T Consensus 356 ~~~~~~~~~~~~~l~~li~~cl~~d--P~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 356 GYRMAKPDHATQEVYDIMVKCWNSE--PEKRPSFLHLSDIVESLL 398 (400)
T ss_pred CCCCCCCccCCHHHHHHHHHHCccC--HhHCcCHHHHHHHHHHHc
Confidence 3344556678889999999999999 999999999999998764
No 81
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=8.7e-33 Score=291.61 Aligned_cols=284 Identities=20% Similarity=0.281 Sum_probs=217.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhhhhcccchhhhhccccccccccCHHHHHHhhcc
Q 003594 383 KLQLSTMAKGHAEAQLEKAVIARAEIVKDIEELRRQRDVLHRRIEFCKEKDAIGMVIRSSELSCAFREYAAEDIRLATED 462 (808)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ei~~at~~ 462 (808)
.++++...++...-+++....+.+++..|+|+|++.|....++++.....+. ..|+.- . ..++
T Consensus 401 tlaEYhEqeEIfKLRlgHLkKEEaeiqaElERLErvrnlHiRELKRi~NEdn-----------SQFkDH-----p-tLn~ 463 (775)
T KOG1151|consen 401 TLAEYHEQEEIFKLRLGHLKKEEAEIQAELERLERVRNLHIRELKRIHNEDN-----------SQFKDH-----P-TLND 463 (775)
T ss_pred cHHHHHhHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhcccch-----------hhhccC-----c-chHH
Confidence 3467777788888888888999999999999999998887777654432211 111111 0 1122
Q ss_pred ccccccccccCCceEEEEEEE--CCeEEEEEEccCCC---------CHHHHHHHHHHHhccCCCCccceeeccc---cce
Q 003594 463 FSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNGL---------SEEDFQAKVSFLTAVRHPHLVAVMGCCS---ELK 528 (808)
Q Consensus 463 f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~---------~~~~~~~Ei~il~~l~HpnIv~l~g~~~---~~~ 528 (808)
-+-.+.++|+|||+.||++.+ ..+.||||+-.-.. -.+...+|..|.+.|+||.||++|++|. +.+
T Consensus 464 RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtdsF 543 (775)
T KOG1151|consen 464 RYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDSF 543 (775)
T ss_pred HHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeeccccc
Confidence 233356789999999999998 57899999865111 1245778999999999999999999993 488
Q ss_pred EEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCC---CccE
Q 003594 529 CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDR---NLVA 605 (808)
Q Consensus 529 ~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~---~~~~ 605 (808)
|-|+|||+|.+|.=+|. ....+++..+..|+.||+.||.||..-. .||||-||||.||||-+ .|.+
T Consensus 544 CTVLEYceGNDLDFYLK----------QhklmSEKEARSIiMQiVnAL~YLNEik-pPIIHYDLKPgNILLv~GtacGeI 612 (775)
T KOG1151|consen 544 CTVLEYCEGNDLDFYLK----------QHKLMSEKEARSIIMQIVNALKYLNEIK-PPIIHYDLKPGNILLVNGTACGEI 612 (775)
T ss_pred eeeeeecCCCchhHHHH----------hhhhhhHHHHHHHHHHHHHHHHHHhccC-CCeeeeccCCccEEEecCccccee
Confidence 99999999999999994 5567999999999999999999999977 79999999999999943 4899
Q ss_pred EEEeCCCccc------------------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhh
Q 003594 606 KISGLGLNIC------------------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMA 649 (808)
Q Consensus 606 kl~DfGla~~------------------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~ 649 (808)
||.|||+++. ..++.|+||||+|||+|+++.|+.||+.....
T Consensus 613 KITDFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQ-- 690 (775)
T KOG1151|consen 613 KITDFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQ-- 690 (775)
T ss_pred EeeecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhH--
Confidence 9999999864 23578999999999999999999999864321
Q ss_pred hcHHHHHHHhccCCCCCC--hhhHHHHHHHHHHhhccCCCcCccccHHhhH
Q 003594 650 LDQTTLMQVLDGNAGIWP--LDLAEELAGIALKCLSADQDANRDLRIAGVM 698 (808)
Q Consensus 650 ~~~~~~~~~ld~~~~~~p--~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl 698 (808)
.+--....++......+| +.++.+...+|.+||++. .++|....++.
T Consensus 691 QdILqeNTIlkAtEVqFP~KPvVsseAkaFIRRCLaYR--KeDR~DV~qLA 739 (775)
T KOG1151|consen 691 QDILQENTILKATEVQFPPKPVVSSEAKAFIRRCLAYR--KEDRIDVQQLA 739 (775)
T ss_pred HHHHhhhchhcceeccCCCCCccCHHHHHHHHHHHHhh--hhhhhhHHHHc
Confidence 011111223333333333 357889999999999999 78887655543
No 82
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=5.3e-33 Score=293.00 Aligned_cols=217 Identities=22% Similarity=0.368 Sum_probs=182.2
Q ss_pred cccccCCceEEEEEEECCeEEEEEEccCCCCHHHHHHHHHHHhccCCCCccceeecccc-ceEEEEeecCCCCHHHHHhh
Q 003594 468 RLKCAGDWTNVYRGRLNHASVAIKTLNNGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE-LKCIVFEYMPNGNLRDKLFT 546 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~~~~~vAiK~l~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-~~~lV~Ey~~~gsL~~~l~~ 546 (808)
+.+|.|+||.||+|..++..||+|.+........+.+|+.++.+++||||+++++++.. ..++||||+++|+|.+++..
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~~iK~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~l~~ 91 (254)
T cd05083 12 EIIGEGEFGAVLQGEYTGQKVAVKNIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVILHNGLYIVMELMSKGNLVNFLRT 91 (254)
T ss_pred eeeccCCCCceEecccCCCceEEEeecCcchHHHHHHHHHHHHhCCCCCcCeEEEEEcCCCcEEEEECCCCCCHHHHHHh
Confidence 56689999999999999999999999865566789999999999999999999999865 78999999999999999954
Q ss_pred ccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-----------
Q 003594 547 SQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC----------- 615 (808)
Q Consensus 547 ~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~----------- 615 (808)
. ....+++..++.++.|++.||.|||+ .+++||||||+|||++.++.+||+|||++..
T Consensus 92 ~--------~~~~~~~~~~~~~~~qi~~al~~lH~---~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 160 (254)
T cd05083 92 R--------GRALVSVIQLLQFSLDVAEGMEYLES---KKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLP 160 (254)
T ss_pred c--------CcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccCcceEEEcCCCcEEECCCccceeccccCCCCCCC
Confidence 3 23468999999999999999999999 5699999999999999999999999998753
Q ss_pred -----------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHHHHHHHHHhhc
Q 003594 616 -----------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAGIALKCLS 683 (808)
Q Consensus 616 -----------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~ 683 (808)
..++.++||||||+++|+|++ |++||..... ......+........+..++..+.+++.+||+
T Consensus 161 ~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~ 235 (254)
T cd05083 161 VKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSL-----KEVKECVEKGYRMEPPEGCPADVYVLMTSCWE 235 (254)
T ss_pred ceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCH-----HHHHHHHhCCCCCCCCCcCCHHHHHHHHHHcC
Confidence 245678999999999999998 9999864321 11112222223334455678899999999999
Q ss_pred cCCCcCccccHHhhHHHHH
Q 003594 684 ADQDANRDLRIAGVMKELD 702 (808)
Q Consensus 684 ~dp~p~~Rps~~evl~~L~ 702 (808)
.+ |..||++.+++..|+
T Consensus 236 ~~--p~~Rp~~~~l~~~l~ 252 (254)
T cd05083 236 TE--PKKRPSFHKLREKLE 252 (254)
T ss_pred CC--hhhCcCHHHHHHHHc
Confidence 99 999999999998875
No 83
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=7.8e-33 Score=292.78 Aligned_cols=218 Identities=29% Similarity=0.443 Sum_probs=182.4
Q ss_pred cccccCCceEEEEEEE-CCeEEEEEEccC-CCCHHHHHHHHHHHhccCCCCccceeecccc-ceEEEEeecCCCCHHHHH
Q 003594 468 RLKCAGDWTNVYRGRL-NHASVAIKTLNN-GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE-LKCIVFEYMPNGNLRDKL 544 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~-~~~~vAiK~l~~-~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-~~~lV~Ey~~~gsL~~~l 544 (808)
+.+|+|+||.||+|.+ .+..||+|.+.. ....+.|.+|+.++++++|||++++++++.+ ..++||||+++++|.+++
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~~~~~lv~e~~~~~~L~~~~ 91 (260)
T cd05070 12 KKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMSPESFLEEAQIMKKLRHDKLVQLYAVVSEEPIYIVTEYMSKGSLLDFL 91 (260)
T ss_pred heeccccCceEEEEEecCCceeEEEEecCCCCCHHHHHHHHHHHHhcCCCceEEEEeEECCCCcEEEEEecCCCcHHHHH
Confidence 4578899999999988 567899999973 4456789999999999999999999998865 779999999999999999
Q ss_pred hhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc---------
Q 003594 545 FTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC--------- 615 (808)
Q Consensus 545 ~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~--------- 615 (808)
... ....+++..+..++.+++.||.|||+ .+|+||||||+||++++++.++|+|||++..
T Consensus 92 ~~~--------~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~ 160 (260)
T cd05070 92 KDG--------EGRALKLPNLVDMAAQVAAGMAYIER---MNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTAR 160 (260)
T ss_pred Hhc--------CCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCccceEEEeCCceEEeCCceeeeeccCcccccc
Confidence 542 23468999999999999999999999 5699999999999999999999999998742
Q ss_pred -----------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHHHHHH
Q 003594 616 -----------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAGI 677 (808)
Q Consensus 616 -----------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~L 677 (808)
..++.++||||||+++|+|++ |.+||.... .......+......+.+...+..+.+|
T Consensus 161 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l 235 (260)
T cd05070 161 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMN-----NREVLEQVERGYRMPCPQDCPISLHEL 235 (260)
T ss_pred cCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCC-----HHHHHHHHHcCCCCCCCCcCCHHHHHH
Confidence 124568999999999999999 899986432 122233333334445666788899999
Q ss_pred HHHhhccCCCcCccccHHhhHHHHHH
Q 003594 678 ALKCLSADQDANRDLRIAGVMKELDE 703 (808)
Q Consensus 678 i~~Cl~~dp~p~~Rps~~evl~~L~~ 703 (808)
+.+||..+ |..|||+.++.+.|+.
T Consensus 236 i~~~l~~~--p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 236 MLQCWKKD--PEERPTFEYLQSFLED 259 (260)
T ss_pred HHHHcccC--cccCcCHHHHHHHHhc
Confidence 99999999 9999999999988864
No 84
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=8.2e-33 Score=294.64 Aligned_cols=227 Identities=24% Similarity=0.411 Sum_probs=180.5
Q ss_pred ccccCCceEEEEEEE--CC--eEEEEEEccCCC---CHHHHHHHHHHHhcc-CCCCccceeecccc--ceEEEEeecCCC
Q 003594 469 LKCAGDWTNVYRGRL--NH--ASVAIKTLNNGL---SEEDFQAKVSFLTAV-RHPHLVAVMGCCSE--LKCIVFEYMPNG 538 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~--~~--~~vAiK~l~~~~---~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~~~lV~Ey~~~g 538 (808)
++|.|+||.||+|.+ ++ ..+++|.+.... ....+.+|+.++.++ +||||++++++|.. ..++||||+++|
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (270)
T cd05047 2 VIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHG 81 (270)
T ss_pred cCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCCC
Confidence 568999999999998 33 357999887322 235788999999999 89999999999865 689999999999
Q ss_pred CHHHHHhhcccccc------ccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCC
Q 003594 539 NLRDKLFTSQRNYK------NCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 612 (808)
Q Consensus 539 sL~~~l~~~~~~~~------~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGl 612 (808)
+|.+++........ .......+++..++.++.|++.||+|||+ .+++||||||+|||++.++.+||+|||+
T Consensus 82 ~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~---~~i~H~dikp~nili~~~~~~kl~dfgl 158 (270)
T cd05047 82 NLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGL 158 (270)
T ss_pred cHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccccceEEEcCCCeEEECCCCC
Confidence 99999965321000 00122458999999999999999999999 6699999999999999999999999999
Q ss_pred ccc------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCCCCCC
Q 003594 613 NIC------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNAGIWP 667 (808)
Q Consensus 613 a~~------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p 667 (808)
+.. ..++.++|||||||++|+|++ |.+||..... ...+..+........+
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~-----~~~~~~~~~~~~~~~~ 233 (270)
T cd05047 159 SRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-----AELYEKLPQGYRLEKP 233 (270)
T ss_pred ccccchhhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCH-----HHHHHHHhCCCCCCCC
Confidence 741 235678999999999999997 9999854211 1222233333333445
Q ss_pred hhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHHH
Q 003594 668 LDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVR 705 (808)
Q Consensus 668 ~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~ 705 (808)
..++..+.+|+.+||..+ |..||++.+++..|+.+.
T Consensus 234 ~~~~~~~~~li~~~l~~~--p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 234 LNCDDEVYDLMRQCWREK--PYERPSFAQILVSLNRML 269 (270)
T ss_pred CcCCHHHHHHHHHHcccC--hhhCCCHHHHHHHHHHhh
Confidence 567789999999999999 999999999999998763
No 85
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=6.9e-33 Score=298.69 Aligned_cols=229 Identities=26% Similarity=0.422 Sum_probs=184.1
Q ss_pred cccccCCceEEEEEEE-------CCeEEEEEEccCCCC--HHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecC
Q 003594 468 RLKCAGDWTNVYRGRL-------NHASVAIKTLNNGLS--EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMP 536 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~-------~~~~vAiK~l~~~~~--~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~ 536 (808)
..+|+|+||.||+|.. ++..|++|.+..... .+.+.+|+.++++++||||+++++++.+ ..++||||++
T Consensus 11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 90 (291)
T cd05094 11 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMK 90 (291)
T ss_pred eeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEEEEecCC
Confidence 4567899999999985 235699999874332 3579999999999999999999999965 7899999999
Q ss_pred CCCHHHHHhhccccc------cccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeC
Q 003594 537 NGNLRDKLFTSQRNY------KNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGL 610 (808)
Q Consensus 537 ~gsL~~~l~~~~~~~------~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~Df 610 (808)
+++|.+++....... ........++|..++.|+.||+.||.|||+ .+|+||||||+|||++.++.++|+||
T Consensus 91 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~df 167 (291)
T cd05094 91 HGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLAS---QHFVHRDLATRNCLVGANLLVKIGDF 167 (291)
T ss_pred CCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccCcceEEEccCCcEEECCC
Confidence 999999996542100 000123458999999999999999999999 66999999999999999999999999
Q ss_pred CCccc---------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccC
Q 003594 611 GLNIC---------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGN 662 (808)
Q Consensus 611 Gla~~---------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~ 662 (808)
|++.. ..++.++|||||||++|+|+| |++||..... ......+..+.
T Consensus 168 g~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~-----~~~~~~~~~~~ 242 (291)
T cd05094 168 GMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN-----TEVIECITQGR 242 (291)
T ss_pred CcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHhCCC
Confidence 98742 234678999999999999999 9999865321 11222333334
Q ss_pred CCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHHHH
Q 003594 663 AGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVRK 706 (808)
Q Consensus 663 ~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~~ 706 (808)
....+..++..+.+++.+||+.+ |..||++.+|++.|+.+.+
T Consensus 243 ~~~~~~~~~~~~~~li~~~l~~~--P~~Rpt~~~v~~~l~~~~~ 284 (291)
T cd05094 243 VLERPRVCPKEVYDIMLGCWQRE--PQQRLNIKEIYKILHALGK 284 (291)
T ss_pred CCCCCccCCHHHHHHHHHHcccC--hhhCcCHHHHHHHHHHHHh
Confidence 44455567889999999999999 9999999999999999865
No 86
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.3e-32 Score=291.15 Aligned_cols=218 Identities=28% Similarity=0.393 Sum_probs=180.5
Q ss_pred cccccCCceEEEEEEEC-CeEEEEEEccC-CCCHHHHHHHHHHHhccCCCCccceeecccc-ceEEEEeecCCCCHHHHH
Q 003594 468 RLKCAGDWTNVYRGRLN-HASVAIKTLNN-GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE-LKCIVFEYMPNGNLRDKL 544 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~~-~~~vAiK~l~~-~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-~~~lV~Ey~~~gsL~~~l 544 (808)
..+|.|+||.||+|.+. +..||+|.+.. ....+.+.+|+.++++++|||++++++++.+ ..++||||+++|+|.+++
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~~ 91 (260)
T cd05069 12 VKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTMMPEAFLQEAQIMKKLRHDKLVPLYAVVSEEPIYIVTEFMGKGSLLDFL 91 (260)
T ss_pred eeecCcCCCeEEEEEEcCCceEEEEEcccCCccHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCcEEEEEcCCCCCHHHHH
Confidence 34678999999999984 45799999873 3445779999999999999999999998865 778999999999999999
Q ss_pred hhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc---------
Q 003594 545 FTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC--------- 615 (808)
Q Consensus 545 ~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~--------- 615 (808)
... ....++|..+..++.|++.||.|||+ .+|+||||||+||++++++.++|+|||++..
T Consensus 92 ~~~--------~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~ 160 (260)
T cd05069 92 KEG--------DGKYLKLPQLVDMAAQIADGMAYIER---MNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTAR 160 (260)
T ss_pred hhC--------CCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccCcceEEEcCCCeEEECCCccceEccCCccccc
Confidence 542 23458999999999999999999999 5699999999999999999999999999752
Q ss_pred -----------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHHHHHH
Q 003594 616 -----------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAGI 677 (808)
Q Consensus 616 -----------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~L 677 (808)
..++.++||||||+++|+|+| |.+||..... ......+........+...+..+.++
T Consensus 161 ~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l 235 (260)
T cd05069 161 QGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVN-----REVLEQVERGYRMPCPQGCPESLHEL 235 (260)
T ss_pred CCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHcCCCCCCCcccCHHHHHH
Confidence 124668999999999999999 8999864321 12223333333344556778899999
Q ss_pred HHHhhccCCCcCccccHHhhHHHHHH
Q 003594 678 ALKCLSADQDANRDLRIAGVMKELDE 703 (808)
Q Consensus 678 i~~Cl~~dp~p~~Rps~~evl~~L~~ 703 (808)
+.+||..| |..||++.+|++.|+.
T Consensus 236 i~~~l~~~--p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 236 MKLCWKKD--PDERPTFEYIQSFLED 259 (260)
T ss_pred HHHHccCC--cccCcCHHHHHHHHhc
Confidence 99999999 9999999999998874
No 87
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=3.9e-33 Score=299.13 Aligned_cols=212 Identities=20% Similarity=0.293 Sum_probs=170.1
Q ss_pred cccCCceEEEEEEE--CCeEEEEEEccCC-----CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCH
Q 003594 470 KCAGDWTNVYRGRL--NHASVAIKTLNNG-----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNL 540 (808)
Q Consensus 470 ~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL 540 (808)
+|.|+||.||++.+ +|+.||+|.+... ...+.+..|+.+++.++||||+++++++.. ..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 47899999999998 6789999998722 122567889999999999999999998855 68999999999999
Q ss_pred HHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-----
Q 003594 541 RDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC----- 615 (808)
Q Consensus 541 ~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~----- 615 (808)
.+++.... .....+++..++.|+.||+.||.|||+ .+|+||||||+|||++.++.+||+|||++..
T Consensus 81 ~~~~~~~~------~~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~ 151 (280)
T cd05608 81 RYHIYNVD------EENPGFPEPRACFYTAQIISGLEHLHQ---RRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQ 151 (280)
T ss_pred HHHHHhcc------ccCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEeeCccceecCCCC
Confidence 99885431 234579999999999999999999999 6699999999999999999999999998742
Q ss_pred --------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHHHH
Q 003594 616 --------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELA 675 (808)
Q Consensus 616 --------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~ 675 (808)
..++.++|||||||++|+|++|+.||....... ........+.. ....+|..++..+.
T Consensus 152 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~ 229 (280)
T cd05608 152 SKTKGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKELKQRILN-DSVTYPDKFSPASK 229 (280)
T ss_pred ccccccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcch-hHHHHHHhhcc-cCCCCcccCCHHHH
Confidence 235678999999999999999999996422110 01111122222 23345667889999
Q ss_pred HHHHHhhccCCCcCccccH
Q 003594 676 GIALKCLSADQDANRDLRI 694 (808)
Q Consensus 676 ~Li~~Cl~~dp~p~~Rps~ 694 (808)
+++.+||+.| |..||++
T Consensus 230 ~li~~~l~~~--P~~R~~~ 246 (280)
T cd05608 230 SFCEALLAKD--PEKRLGF 246 (280)
T ss_pred HHHHHHhcCC--HHHhcCC
Confidence 9999999999 9999943
No 88
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=7.7e-33 Score=293.99 Aligned_cols=224 Identities=25% Similarity=0.441 Sum_probs=183.9
Q ss_pred ccccccccccccCCceEEEEEEE--CC---eEEEEEEccCCCC---HHHHHHHHHHHhccCCCCccceeecccc--ceEE
Q 003594 461 EDFSERFRLKCAGDWTNVYRGRL--NH---ASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCI 530 (808)
Q Consensus 461 ~~f~~~~~i~g~G~~g~Vy~~~~--~~---~~vAiK~l~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~l 530 (808)
++|... +.+|+|+||.||+|.+ ++ ..||+|.+..... .+.+.+|+.++.+++||||+++++++.+ ..++
T Consensus 5 ~~~~~~-~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (268)
T cd05063 5 SHITKQ-KVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI 83 (268)
T ss_pred HHceEe-eEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence 456543 5678899999999998 33 3799999874322 3578899999999999999999999865 7899
Q ss_pred EEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeC
Q 003594 531 VFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGL 610 (808)
Q Consensus 531 V~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~Df 610 (808)
||||+++++|.+++.. ....+++..+..++.|++.||.|||+ .+|+||||||+|||++.++.+||+||
T Consensus 84 v~e~~~~~~L~~~~~~---------~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~dlkp~Nili~~~~~~kl~df 151 (268)
T cd05063 84 ITEYMENGALDKYLRD---------HDGEFSSYQLVGMLRGIAAGMKYLSD---MNYVHRDLAARNILVNSNLECKVSDF 151 (268)
T ss_pred EEEcCCCCCHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccccchhhEEEcCCCcEEECCC
Confidence 9999999999999953 23568999999999999999999999 56999999999999999999999999
Q ss_pred CCccc----------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhcc
Q 003594 611 GLNIC----------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDG 661 (808)
Q Consensus 611 Gla~~----------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~ 661 (808)
|++.. ..++.++|||||||++|+|++ |+.||.... .......+...
T Consensus 152 g~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~-----~~~~~~~i~~~ 226 (268)
T cd05063 152 GLSRVLEDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMS-----NHEVMKAINDG 226 (268)
T ss_pred ccceecccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCC-----HHHHHHHHhcC
Confidence 98742 234678999999999999997 999985422 12223333333
Q ss_pred CCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHH
Q 003594 662 NAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEV 704 (808)
Q Consensus 662 ~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l 704 (808)
...+.+..++..+.+++.+||..+ |..||++.+|+..|+++
T Consensus 227 ~~~~~~~~~~~~~~~li~~c~~~~--p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 227 FRLPAPMDCPSAVYQLMLQCWQQD--RARRPRFVDIVNLLDKL 267 (268)
T ss_pred CCCCCCCCCCHHHHHHHHHHcCCC--cccCcCHHHHHHHHHhh
Confidence 344455567889999999999999 99999999999999875
No 89
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=7.9e-33 Score=290.59 Aligned_cols=215 Identities=24% Similarity=0.420 Sum_probs=178.4
Q ss_pred ccccCCceEEEEEEE-CCeEEEEEEccCCCC---HHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCHHH
Q 003594 469 LKCAGDWTNVYRGRL-NHASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNLRD 542 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~-~~~~vAiK~l~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL~~ 542 (808)
++|.|+||.||+|.. ++..||+|.+..... ...|.+|+.++..++||||++++++|.+ ..++||||+++|+|.+
T Consensus 2 ~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~ 81 (250)
T cd05085 2 LLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFLS 81 (250)
T ss_pred ccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHHH
Confidence 578999999999987 578899999874433 3468899999999999999999999865 7899999999999999
Q ss_pred HHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-------
Q 003594 543 KLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC------- 615 (808)
Q Consensus 543 ~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~------- 615 (808)
++.. ....+++..++.++.|++.||.|||+ .+++||||||+||+++.++.+||+|||++..
T Consensus 82 ~~~~---------~~~~~~~~~~~~~~~~i~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~ 149 (250)
T cd05085 82 FLRK---------KKDELKTKQLVKFALDAAAGMAYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYS 149 (250)
T ss_pred HHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecccChheEEEcCCCeEEECCCccceeccccccc
Confidence 9853 23458999999999999999999999 5699999999999999999999999998742
Q ss_pred -------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHHHH
Q 003594 616 -------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELA 675 (808)
Q Consensus 616 -------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~ 675 (808)
..++.++||||||+++|+|++ |..||..... ......+........+..++..+.
T Consensus 150 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 224 (250)
T cd05085 150 SSGLKQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTN-----QQAREQVEKGYRMSCPQKCPDDVY 224 (250)
T ss_pred cCCCCCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCH-----HHHHHHHHcCCCCCCCCCCCHHHH
Confidence 234678999999999999998 9999864321 111222222333445566789999
Q ss_pred HHHHHhhccCCCcCccccHHhhHHHHH
Q 003594 676 GIALKCLSADQDANRDLRIAGVMKELD 702 (808)
Q Consensus 676 ~Li~~Cl~~dp~p~~Rps~~evl~~L~ 702 (808)
+++.+||..+ |..||++.++++.|.
T Consensus 225 ~li~~~l~~~--p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 225 KVMQRCWDYK--PENRPKFSELQKELA 249 (250)
T ss_pred HHHHHHcccC--cccCCCHHHHHHHhc
Confidence 9999999999 999999999998874
No 90
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=2.8e-33 Score=307.60 Aligned_cols=211 Identities=22% Similarity=0.306 Sum_probs=172.3
Q ss_pred ccccCCceEEEEEEE--CCeEEEEEEccCC-----CCHHHHHHHHHHHhcc-CCCCccceeecccc--ceEEEEeecCCC
Q 003594 469 LKCAGDWTNVYRGRL--NHASVAIKTLNNG-----LSEEDFQAKVSFLTAV-RHPHLVAVMGCCSE--LKCIVFEYMPNG 538 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-----~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~~~lV~Ey~~~g 538 (808)
++|+|+||.||++.+ ++..||||+++.. .....+..|..++..+ +||||++++++|.+ ..||||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~g 81 (329)
T cd05588 2 VIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSGG 81 (329)
T ss_pred eEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 578999999999998 5789999999732 2235678899999998 79999999999865 789999999999
Q ss_pred CHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc---
Q 003594 539 NLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC--- 615 (808)
Q Consensus 539 sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~--- 615 (808)
+|.+++. ....+++..+..|+.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 82 ~L~~~~~----------~~~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~ 148 (329)
T cd05588 82 DLMFHMQ----------RQRKLPEEHARFYSAEISLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIR 148 (329)
T ss_pred CHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEECcCcccccccc
Confidence 9999883 34579999999999999999999999 6699999999999999999999999998742
Q ss_pred ----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHH---hhhcHHHHHHHhccCCCCCChhh
Q 003594 616 ----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKA---MALDQTTLMQVLDGNAGIWPLDL 670 (808)
Q Consensus 616 ----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~---~~~~~~~~~~~ld~~~~~~p~~~ 670 (808)
..++.++|||||||++|+|+||+.||...... ...........+.......|..+
T Consensus 149 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 228 (329)
T cd05588 149 PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEKQIRIPRSL 228 (329)
T ss_pred CCCccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcCCCCCCCCC
Confidence 24678999999999999999999999642110 00111222233333344566778
Q ss_pred HHHHHHHHHHhhccCCCcCccccH
Q 003594 671 AEELAGIALKCLSADQDANRDLRI 694 (808)
Q Consensus 671 ~~~l~~Li~~Cl~~dp~p~~Rps~ 694 (808)
+..+.+++.+||+.| |..||++
T Consensus 229 ~~~~~~li~~~L~~d--P~~R~~~ 250 (329)
T cd05588 229 SVKASSVLKGFLNKD--PKERLGC 250 (329)
T ss_pred CHHHHHHHHHHhccC--HHHcCCC
Confidence 889999999999999 9999983
No 91
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=1.2e-33 Score=308.91 Aligned_cols=208 Identities=21% Similarity=0.274 Sum_probs=172.9
Q ss_pred cccccCCceEEEEEEE-----CCeEEEEEEccCC----CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecC
Q 003594 468 RLKCAGDWTNVYRGRL-----NHASVAIKTLNNG----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMP 536 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~-----~~~~vAiK~l~~~----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~ 536 (808)
+.+|.|+||.||++.. +|..||+|++... .....+.+|+.+|.+++||||+++++++.+ ..|+||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 4578999999999875 4689999999721 233567789999999999999999999865 7899999999
Q ss_pred CCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-
Q 003594 537 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC- 615 (808)
Q Consensus 537 ~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~- 615 (808)
+|+|.+++. ....+++..+..|+.||+.||.|||+ .+|+||||||+|||++.++.+||+|||++..
T Consensus 82 ~~~L~~~l~----------~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~ 148 (318)
T cd05582 82 GGDLFTRLS----------KEVMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKES 148 (318)
T ss_pred CCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHeEECCCCcEEEeeccCCccc
Confidence 999999994 34568999999999999999999999 5699999999999999999999999998743
Q ss_pred ------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhH
Q 003594 616 ------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLA 671 (808)
Q Consensus 616 ------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~ 671 (808)
..++.++|||||||++|+|+||+.||..... ......+.. .....|...+
T Consensus 149 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~-----~~~~~~i~~-~~~~~p~~~~ 222 (318)
T cd05582 149 IDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDR-----KETMTMILK-AKLGMPQFLS 222 (318)
T ss_pred CCCCCceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCH-----HHHHHHHHc-CCCCCCCCCC
Confidence 2357899999999999999999999965321 122222222 2334566788
Q ss_pred HHHHHHHHHhhccCCCcCccccHHh
Q 003594 672 EELAGIALKCLSADQDANRDLRIAG 696 (808)
Q Consensus 672 ~~l~~Li~~Cl~~dp~p~~Rps~~e 696 (808)
..+.+|+.+||+.| |..||++.+
T Consensus 223 ~~~~~li~~~l~~~--P~~R~~a~~ 245 (318)
T cd05582 223 PEAQSLLRALFKRN--PANRLGAGP 245 (318)
T ss_pred HHHHHHHHHHhhcC--HhHcCCCCC
Confidence 99999999999999 999999665
No 92
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=4.6e-33 Score=321.21 Aligned_cols=220 Identities=16% Similarity=0.184 Sum_probs=181.2
Q ss_pred cccccccccCCceEEEEEEE--C-CeEEEEEEccCCC--CHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecC
Q 003594 464 SERFRLKCAGDWTNVYRGRL--N-HASVAIKTLNNGL--SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMP 536 (808)
Q Consensus 464 ~~~~~i~g~G~~g~Vy~~~~--~-~~~vAiK~l~~~~--~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~ 536 (808)
+....++|+|+||.||++.. + +..||+|.+.... ....+.+|+.+|+.++|||||+++++|.. ..||||||++
T Consensus 69 y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~~ 148 (478)
T PTZ00267 69 YVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYGS 148 (478)
T ss_pred EEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECCC
Confidence 34456778999999999987 3 6789999875322 23467889999999999999999999855 7899999999
Q ss_pred CCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-
Q 003594 537 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC- 615 (808)
Q Consensus 537 ~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~- 615 (808)
||+|.++|.... ....++++..+..|+.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 149 gg~L~~~l~~~~------~~~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~ 219 (478)
T PTZ00267 149 GGDLNKQIKQRL------KEHLPFQEYEVGLLFYQIVLALDEVHS---RKMMHRDLKSANIFLMPTGIIKLGDFGFSKQY 219 (478)
T ss_pred CCCHHHHHHHHH------hccCCCCHHHHHHHHHHHHHHHHHHHh---CCEEECCcCHHhEEECCCCcEEEEeCcCceec
Confidence 999999986431 234578999999999999999999999 6699999999999999999999999999752
Q ss_pred --------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChh
Q 003594 616 --------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLD 669 (808)
Q Consensus 616 --------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~ 669 (808)
..++.++|||||||++|+|++|++||.... ....+..++.+.....|..
T Consensus 220 ~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~-----~~~~~~~~~~~~~~~~~~~ 294 (478)
T PTZ00267 220 SDSVSLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPS-----QREIMQQVLYGKYDPFPCP 294 (478)
T ss_pred CCccccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC-----HHHHHHHHHhCCCCCCCcc
Confidence 236778999999999999999999986432 1233344444444456667
Q ss_pred hHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 670 LAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 670 ~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
++..+.+|+.+||..| |..||++.+++.
T Consensus 295 ~s~~~~~li~~~L~~d--P~~Rps~~~~l~ 322 (478)
T PTZ00267 295 VSSGMKALLDPLLSKN--PALRPTTQQLLH 322 (478)
T ss_pred CCHHHHHHHHHHhccC--hhhCcCHHHHHh
Confidence 8899999999999999 999999999875
No 93
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.9e-33 Score=287.94 Aligned_cols=222 Identities=23% Similarity=0.300 Sum_probs=173.6
Q ss_pred ccccccccccccCCceEEEEEEE--CCeEEEEEEccCCCC----HHHHHHHHHHHhccCCCCccceeecc----ccceEE
Q 003594 461 EDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNGLS----EEDFQAKVSFLTAVRHPHLVAVMGCC----SELKCI 530 (808)
Q Consensus 461 ~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~~----~~~~~~Ei~il~~l~HpnIv~l~g~~----~~~~~l 530 (808)
++|...++| +.|+||.||+|++ +++.||+|+++.... +-.-.+||.+|.+++|||||.+-.+. .+..||
T Consensus 76 ~efe~lnrI-~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~ 154 (419)
T KOG0663|consen 76 EEFEKLNRI-EEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYI 154 (419)
T ss_pred HHHHHHhhc-ccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeee
Confidence 345555554 6899999999999 689999999983332 23568999999999999999987665 348999
Q ss_pred EEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeC
Q 003594 531 VFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGL 610 (808)
Q Consensus 531 V~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~Df 610 (808)
|||||+ -+|..++.. ...++...+...++.|++.||+|||.+ .|+||||||+|+|++..|.+||+||
T Consensus 155 VMe~~E-hDLksl~d~---------m~q~F~~~evK~L~~QlL~glk~lH~~---wilHRDLK~SNLLm~~~G~lKiaDF 221 (419)
T KOG0663|consen 155 VMEYVE-HDLKSLMET---------MKQPFLPGEVKTLMLQLLRGLKHLHDN---WILHRDLKTSNLLLSHKGILKIADF 221 (419)
T ss_pred eHHHHH-hhHHHHHHh---------ccCCCchHHHHHHHHHHHHHHHHHhhc---eeEecccchhheeeccCCcEEeccc
Confidence 999998 589999953 346889999999999999999999994 5999999999999999999999999
Q ss_pred CCccc--------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCC
Q 003594 611 GLNIC--------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 664 (808)
Q Consensus 611 Gla~~--------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~ 664 (808)
|+|+. ..|++..|+||+|||+.||++++|-|.........+ ..+..+-.+...
T Consensus 222 GLAR~ygsp~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~-~If~llGtPte~ 300 (419)
T KOG0663|consen 222 GLAREYGSPLKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLD-KIFKLLGTPSEA 300 (419)
T ss_pred chhhhhcCCcccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHH-HHHHHhCCCccc
Confidence 99974 458999999999999999999999885432210000 001111011111
Q ss_pred CC--------------------------Chh-hHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 665 IW--------------------------PLD-LAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 665 ~~--------------------------p~~-~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
.| +.. .++.-.+|+..+|.+| |..|.|+.+.++
T Consensus 301 iwpg~~~lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~d--P~kR~tA~~~L~ 360 (419)
T KOG0663|consen 301 IWPGYSELPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYD--PGKRITAEDGLK 360 (419)
T ss_pred cCCCccccchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccC--ccccccHHHhhc
Confidence 11 111 4578899999999999 999999988764
No 94
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=9.3e-33 Score=292.15 Aligned_cols=218 Identities=23% Similarity=0.396 Sum_probs=176.4
Q ss_pred ccccCCceEEEEEEEC-----CeEEEEEEccCCCC---HHHHHHHHHHHhccCCCCccceeecccc---ceEEEEeecCC
Q 003594 469 LKCAGDWTNVYRGRLN-----HASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE---LKCIVFEYMPN 537 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~~-----~~~vAiK~l~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~---~~~lV~Ey~~~ 537 (808)
++|+|+||.||+|.+. +..||||.+..... ...+.+|+.+++.++||||++++++|.. ..++||||+++
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~ 81 (262)
T cd05058 2 VIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMKH 81 (262)
T ss_pred cccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCCC
Confidence 5689999999999862 35799999863222 3578899999999999999999998742 57899999999
Q ss_pred CCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--
Q 003594 538 GNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-- 615 (808)
Q Consensus 538 gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-- 615 (808)
|+|.+++... ...+++..++.++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||++..
T Consensus 82 ~~L~~~~~~~---------~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~ 149 (262)
T cd05058 82 GDLRNFIRSE---------THNPTVKDLIGFGLQVAKGMEYLAS---KKFVHRDLAARNCMLDESFTVKVADFGLARDIY 149 (262)
T ss_pred CCHHHHHHhc---------CCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCcccccccc
Confidence 9999999532 3446788889999999999999999 5699999999999999999999999998741
Q ss_pred ---------------------------CCCCcchhhHhHHHHHHHHHcC-CCCchhhHHHhhhcHHHHHHHhccCCCCCC
Q 003594 616 ---------------------------DQLNVRSDIRAFGTLLLHLLTG-RNWAGLVEKAMALDQTTLMQVLDGNAGIWP 667 (808)
Q Consensus 616 ---------------------------~~~t~ksDVwS~Gvil~elltG-~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p 667 (808)
..++.++|||||||++|||++| .+||..... ......+..+.....+
T Consensus 150 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 224 (262)
T cd05058 150 DKEYYSVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDS-----FDITVYLLQGRRLLQP 224 (262)
T ss_pred CCcceeecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHHHhcCCCCCCC
Confidence 2346789999999999999995 666653211 1222233333344445
Q ss_pred hhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHHH
Q 003594 668 LDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVR 705 (808)
Q Consensus 668 ~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~ 705 (808)
...+..+.+++.+||..+ |..||++.+|+..|+.+.
T Consensus 225 ~~~~~~~~~li~~cl~~~--p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 225 EYCPDPLYEVMLSCWHPK--PEMRPTFSELVSRIEQIF 260 (262)
T ss_pred CcCCHHHHHHHHHHcCCC--hhhCCCHHHHHHHHHHHh
Confidence 566789999999999999 999999999999999875
No 95
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=9.2e-33 Score=292.23 Aligned_cols=218 Identities=27% Similarity=0.421 Sum_probs=181.9
Q ss_pred cccccCCceEEEEEEE-CCeEEEEEEccC-CCCHHHHHHHHHHHhccCCCCccceeecccc-ceEEEEeecCCCCHHHHH
Q 003594 468 RLKCAGDWTNVYRGRL-NHASVAIKTLNN-GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE-LKCIVFEYMPNGNLRDKL 544 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~-~~~~vAiK~l~~-~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-~~~lV~Ey~~~gsL~~~l 544 (808)
+.+|.|+||.||+|.. ++..||+|.+.. ......|.+|+.++++++||||+++++++.+ ..++||||+++|+|.+++
T Consensus 12 ~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~~ 91 (260)
T cd05067 12 KKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSMSPEAFLAEANLMKQLQHPRLVRLYAVVTQEPIYIITEYMENGSLVDFL 91 (260)
T ss_pred eeeccCccceEEeeecCCCceEEEEEecCCCCcHHHHHHHHHHHHhcCCcCeeeEEEEEccCCcEEEEEcCCCCCHHHHH
Confidence 4578999999999998 678999999883 4456789999999999999999999998855 789999999999999998
Q ss_pred hhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc---------
Q 003594 545 FTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC--------- 615 (808)
Q Consensus 545 ~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~--------- 615 (808)
... ....+++..+..++.|++.||.|||+ .+++||||||+||+++.++.++|+|||++..
T Consensus 92 ~~~--------~~~~~~~~~~~~i~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~ 160 (260)
T cd05067 92 KTP--------EGIKLTINKLIDMAAQIAEGMAFIER---KNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAR 160 (260)
T ss_pred Hhc--------CCCCCCHHHHHHHHHHHHHHHHHHhc---CCeecccccHHhEEEcCCCCEEEccCcceeecCCCCcccc
Confidence 542 34568999999999999999999999 5699999999999999999999999998742
Q ss_pred -----------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHHHHHH
Q 003594 616 -----------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAGI 677 (808)
Q Consensus 616 -----------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~L 677 (808)
..++.++||||||+++|+|++ |++||..... ......+........+...+.++.++
T Consensus 161 ~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l 235 (260)
T cd05067 161 EGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTN-----PEVIQNLERGYRMPRPDNCPEELYEL 235 (260)
T ss_pred cCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCCh-----HHHHHHHHcCCCCCCCCCCCHHHHHH
Confidence 124678999999999999999 9999864321 11222222333334455677899999
Q ss_pred HHHhhccCCCcCccccHHhhHHHHHH
Q 003594 678 ALKCLSADQDANRDLRIAGVMKELDE 703 (808)
Q Consensus 678 i~~Cl~~dp~p~~Rps~~evl~~L~~ 703 (808)
+.+||..+ |..||++.+++..|+.
T Consensus 236 i~~~l~~~--p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 236 MRLCWKEK--PEERPTFEYLRSVLED 259 (260)
T ss_pred HHHHccCC--hhhCCCHHHHHHHhhc
Confidence 99999999 9999999999998864
No 96
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=9.8e-33 Score=298.50 Aligned_cols=232 Identities=22% Similarity=0.375 Sum_probs=184.7
Q ss_pred cccccCCceEEEEEEE--CC--eEEEEEEccCCC---CHHHHHHHHHHHhcc-CCCCccceeecccc--ceEEEEeecCC
Q 003594 468 RLKCAGDWTNVYRGRL--NH--ASVAIKTLNNGL---SEEDFQAKVSFLTAV-RHPHLVAVMGCCSE--LKCIVFEYMPN 537 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~--~~vAiK~l~~~~---~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~~~lV~Ey~~~ 537 (808)
.++|.|+||.||+|.+ ++ ..+++|.++... ..+.|.+|+.++.++ +||||+++++++.+ ..++||||+++
T Consensus 8 ~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 87 (297)
T cd05089 8 DVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIAIEYAPY 87 (297)
T ss_pred eeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEEEEecCC
Confidence 4678999999999988 33 357899887322 235788999999999 79999999999865 68999999999
Q ss_pred CCHHHHHhhcccccc------ccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCC
Q 003594 538 GNLRDKLFTSQRNYK------NCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLG 611 (808)
Q Consensus 538 gsL~~~l~~~~~~~~------~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfG 611 (808)
|+|.+++........ .......+++..++.|+.||+.||.|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 88 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kl~dfg 164 (297)
T cd05089 88 GNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSE---KQFIHRDLAARNVLVGENLASKIADFG 164 (297)
T ss_pred CcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCcCCcceEEECCCCeEEECCcC
Confidence 999999965321100 00122468999999999999999999999 669999999999999999999999999
Q ss_pred Cccc------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCCCCC
Q 003594 612 LNIC------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNAGIW 666 (808)
Q Consensus 612 la~~------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~~~~ 666 (808)
++.. ..++.++|||||||++|+|++ |.+||..... ...+..+........
T Consensus 165 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~-----~~~~~~~~~~~~~~~ 239 (297)
T cd05089 165 LSRGEEVYVKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTC-----AELYEKLPQGYRMEK 239 (297)
T ss_pred CCccccceeccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHHHhcCCCCCC
Confidence 8732 235789999999999999997 9999864321 122233333334445
Q ss_pred ChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHHHHhcc
Q 003594 667 PLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVRKKAD 709 (808)
Q Consensus 667 p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~~~~~ 709 (808)
|..++..+.+|+.+||+.+ |..||++.++++.|+.+.....
T Consensus 240 ~~~~~~~~~~li~~~l~~~--p~~Rp~~~~i~~~l~~~~~~~~ 280 (297)
T cd05089 240 PRNCDDEVYELMRQCWRDR--PYERPPFAQISVQLSRMLEARK 280 (297)
T ss_pred CCCCCHHHHHHHHHHcCCC--hhhCcCHHHHHHHHHHHHHhhc
Confidence 6678889999999999999 9999999999999998876543
No 97
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=1.1e-32 Score=302.25 Aligned_cols=206 Identities=24% Similarity=0.356 Sum_probs=168.0
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccCC-----CCHHHHHHHHHHH---hccCCCCccceeecccc--ceEEEEee
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNNG-----LSEEDFQAKVSFL---TAVRHPHLVAVMGCCSE--LKCIVFEY 534 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-----~~~~~~~~Ei~il---~~l~HpnIv~l~g~~~~--~~~lV~Ey 534 (808)
.+.+|.|+||.||+|.+ +|+.||||++... ...+.+.+|+.++ +.++||||+++++++.+ ..|+||||
T Consensus 4 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv~E~ 83 (324)
T cd05589 4 LAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFVMEY 83 (324)
T ss_pred EEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEEEcC
Confidence 45678999999999998 5789999999721 2235567776655 56789999999999865 78999999
Q ss_pred cCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCcc
Q 003594 535 MPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNI 614 (808)
Q Consensus 535 ~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~ 614 (808)
+++|+|..++. ...+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||++.
T Consensus 84 ~~~~~L~~~~~-----------~~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~ 149 (324)
T cd05589 84 AAGGDLMMHIH-----------TDVFSEPRAVFYAACVVLGLQYLHE---NKIVYRDLKLDNLLLDTEGFVKIADFGLCK 149 (324)
T ss_pred CCCCcHHHHhh-----------cCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCcEEeCcccCCc
Confidence 99999998883 2458999999999999999999999 569999999999999999999999999874
Q ss_pred c-------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChh
Q 003594 615 C-------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLD 669 (808)
Q Consensus 615 ~-------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~ 669 (808)
. ..++.++|||||||++|+|++|++||..... ......+.. ....+|..
T Consensus 150 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~-----~~~~~~i~~-~~~~~p~~ 223 (324)
T cd05589 150 EGMGFGDRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDE-----EEVFDSIVN-DEVRYPRF 223 (324)
T ss_pred cCCCCCCcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHh-CCCCCCCC
Confidence 2 2357789999999999999999999965321 112222222 23346667
Q ss_pred hHHHHHHHHHHhhccCCCcCccccH
Q 003594 670 LAEELAGIALKCLSADQDANRDLRI 694 (808)
Q Consensus 670 ~~~~l~~Li~~Cl~~dp~p~~Rps~ 694 (808)
++..+.+++.+||..| |..||++
T Consensus 224 ~~~~~~~li~~~L~~d--P~~R~~~ 246 (324)
T cd05589 224 LSREAISIMRRLLRRN--PERRLGS 246 (324)
T ss_pred CCHHHHHHHHHHhhcC--HhHcCCC
Confidence 8899999999999999 8999953
No 98
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1.6e-32 Score=297.84 Aligned_cols=223 Identities=22% Similarity=0.394 Sum_probs=180.4
Q ss_pred cccccccCCceEEEEEEE--CCe----EEEEEEccCCCC---HHHHHHHHHHHhccCCCCccceeecccc-ceEEEEeec
Q 003594 466 RFRLKCAGDWTNVYRGRL--NHA----SVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE-LKCIVFEYM 535 (808)
Q Consensus 466 ~~~i~g~G~~g~Vy~~~~--~~~----~vAiK~l~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~-~~~lV~Ey~ 535 (808)
..+.+|.|+||.||+|.+ +|. .||+|.+..... ...+.+|+.+++.++||||++++|+|.. ..++|+||+
T Consensus 11 ~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~v~e~~ 90 (303)
T cd05110 11 RVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLVTQLM 90 (303)
T ss_pred eccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCCCceeeehhc
Confidence 346788999999999987 443 589999874333 2468899999999999999999999865 678999999
Q ss_pred CCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc
Q 003594 536 PNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC 615 (808)
Q Consensus 536 ~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~ 615 (808)
++|+|.+++.. ....+++..++.++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 91 ~~g~l~~~~~~---------~~~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~ 158 (303)
T cd05110 91 PHGCLLDYVHE---------HKDNIGSQLLLNWCVQIAKGMMYLEE---RRLVHRDLAARNVLVKSPNHVKITDFGLARL 158 (303)
T ss_pred CCCCHHHHHHh---------cccCCCHHHHHHHHHHHHHHHHHHhh---cCeeccccccceeeecCCCceEEcccccccc
Confidence 99999999953 23468999999999999999999999 5699999999999999999999999998852
Q ss_pred ---------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhc-cCCCCC
Q 003594 616 ---------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLD-GNAGIW 666 (808)
Q Consensus 616 ---------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld-~~~~~~ 666 (808)
..++.++|||||||++|||++ |..||.... ......++. ......
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~------~~~~~~~~~~~~~~~~ 232 (303)
T cd05110 159 LEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP------TREIPDLLEKGERLPQ 232 (303)
T ss_pred ccCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCC------HHHHHHHHHCCCCCCC
Confidence 234678999999999999997 888885421 111222222 222333
Q ss_pred ChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHHHHhc
Q 003594 667 PLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVRKKA 708 (808)
Q Consensus 667 p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~~~~ 708 (808)
+..++..+.+++.+||..+ |..||++.+++..|+.+....
T Consensus 233 ~~~~~~~~~~li~~c~~~~--p~~Rp~~~~l~~~l~~~~~~~ 272 (303)
T cd05110 233 PPICTIDVYMVMVKCWMID--ADSRPKFKELAAEFSRMARDP 272 (303)
T ss_pred CCCCCHHHHHHHHHHcCCC--hhhCcCHHHHHHHHHHHHhch
Confidence 4456788999999999999 999999999999999886543
No 99
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=5.5e-33 Score=303.61 Aligned_cols=206 Identities=25% Similarity=0.331 Sum_probs=170.2
Q ss_pred ccccCCceEEEEEEE--CCeEEEEEEccCC-----CCHHHHHHHHHHHhcc-CCCCccceeecccc--ceEEEEeecCCC
Q 003594 469 LKCAGDWTNVYRGRL--NHASVAIKTLNNG-----LSEEDFQAKVSFLTAV-RHPHLVAVMGCCSE--LKCIVFEYMPNG 538 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-----~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~~~lV~Ey~~~g 538 (808)
.+|+|+||.||+|.+ ++..||||++... .....+..|..++..+ +||||+++++++.+ ..++||||+++|
T Consensus 2 ~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~g 81 (316)
T cd05619 2 MLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNGG 81 (316)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCCC
Confidence 468999999999998 4689999998732 2345677788888764 99999999999865 788999999999
Q ss_pred CHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc---
Q 003594 539 NLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC--- 615 (808)
Q Consensus 539 sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~--- 615 (808)
+|.+++. ....+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||++..
T Consensus 82 ~L~~~l~----------~~~~~~~~~~~~~~~qi~~al~~LH~---~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~ 148 (316)
T cd05619 82 DLMFHIQ----------SCHKFDLPRATFYAAEIICGLQFLHS---KGIVYRDLKLDNILLDTDGHIKIADFGMCKENML 148 (316)
T ss_pred cHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHh---CCeEeCCCCHHHEEECCCCCEEEccCCcceECCC
Confidence 9999994 34568999999999999999999999 5699999999999999999999999998742
Q ss_pred ----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHH
Q 003594 616 ----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEE 673 (808)
Q Consensus 616 ----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~ 673 (808)
..++.++|||||||++|+|++|++||..... ..+...+......+|...+.+
T Consensus 149 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~------~~~~~~i~~~~~~~~~~~~~~ 222 (316)
T cd05619 149 GDAKTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDE------EELFQSIRMDNPCYPRWLTRE 222 (316)
T ss_pred CCCceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCH------HHHHHHHHhCCCCCCccCCHH
Confidence 2467899999999999999999999965321 112222222334455667889
Q ss_pred HHHHHHHhhccCCCcCccccHH
Q 003594 674 LAGIALKCLSADQDANRDLRIA 695 (808)
Q Consensus 674 l~~Li~~Cl~~dp~p~~Rps~~ 695 (808)
+.+|+.+||..| |..||++.
T Consensus 223 ~~~li~~~l~~~--P~~R~~~~ 242 (316)
T cd05619 223 AKDILVKLFVRE--PERRLGVK 242 (316)
T ss_pred HHHHHHHHhccC--HhhcCCCh
Confidence 999999999999 99999986
No 100
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1e-32 Score=297.09 Aligned_cols=228 Identities=27% Similarity=0.425 Sum_probs=182.7
Q ss_pred cccccCCceEEEEEEEC-------CeEEEEEEccCCCC---HHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeec
Q 003594 468 RLKCAGDWTNVYRGRLN-------HASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYM 535 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~~-------~~~vAiK~l~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~ 535 (808)
.++|+|+||.||+|... ...|++|.+..... ...+.+|+.+++.++||||+++++.|.. ..++||||+
T Consensus 6 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 85 (290)
T cd05045 6 KTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLLIVEYA 85 (290)
T ss_pred ccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEEEEEec
Confidence 45688999999999873 25699999874433 3568899999999999999999999865 789999999
Q ss_pred CCCCHHHHHhhcccccc--------------ccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCC
Q 003594 536 PNGNLRDKLFTSQRNYK--------------NCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDR 601 (808)
Q Consensus 536 ~~gsL~~~l~~~~~~~~--------------~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~ 601 (808)
++|+|.+++........ .......+++..++.++.|++.||.|||+ .+|+||||||+|||+++
T Consensus 86 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~---~~ivH~dikp~nill~~ 162 (290)
T cd05045 86 KYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAE---MKLVHRDLAARNVLVAE 162 (290)
T ss_pred CCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHH---CCeehhhhhhheEEEcC
Confidence 99999999865321100 00123468999999999999999999999 56999999999999999
Q ss_pred CccEEEEeCCCccc---------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHH
Q 003594 602 NLVAKISGLGLNIC---------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQT 653 (808)
Q Consensus 602 ~~~~kl~DfGla~~---------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~ 653 (808)
++.+||+|||+++. ..++.++||||||+++|+|+| |.+||.... ..
T Consensus 163 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~------~~ 236 (290)
T cd05045 163 GRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIA------PE 236 (290)
T ss_pred CCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCC------HH
Confidence 99999999999742 125678999999999999998 999986421 11
Q ss_pred HHHHHhc-cCCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHHHH
Q 003594 654 TLMQVLD-GNAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVRK 706 (808)
Q Consensus 654 ~~~~~ld-~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~~ 706 (808)
.+...+. ......|..++..+.+++.+||+.+ |..||++.++++.|+.+..
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~cl~~~--P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 237 RLFNLLKTGYRMERPENCSEEMYNLMLTCWKQE--PDKRPTFADISKELEKMMV 288 (290)
T ss_pred HHHHHHhCCCCCCCCCCCCHHHHHHHHHHccCC--cccCCCHHHHHHHHHHHHh
Confidence 2222222 2334456677889999999999999 9999999999999998853
No 101
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=3.3e-33 Score=312.92 Aligned_cols=215 Identities=17% Similarity=0.239 Sum_probs=171.6
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccCC-----CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNNG-----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPN 537 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~ 537 (808)
.+.+|.|+||.||++.. +|+.||||++... .....+.+|+.++.+++|||||+++++|.+ ..||||||++|
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~E~~~g 85 (377)
T cd05629 6 VKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIMEFLPG 85 (377)
T ss_pred eEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEEeCCCC
Confidence 35678999999999988 6889999998621 123568889999999999999999999966 78999999999
Q ss_pred CCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--
Q 003594 538 GNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-- 615 (808)
Q Consensus 538 gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-- 615 (808)
|+|.+++. ....+++..+..++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 86 g~L~~~l~----------~~~~~~~~~~~~~~~ql~~aL~~LH~---~givHrDlkp~NIll~~~~~~kl~DfGla~~~~ 152 (377)
T cd05629 86 GDLMTMLI----------KYDTFSEDVTRFYMAECVLAIEAVHK---LGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFH 152 (377)
T ss_pred CcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEECCCCCEEEeecccccccc
Confidence 99999994 34568999999999999999999999 6699999999999999999999999998730
Q ss_pred ----------------------------------------------------------------------CCCCcchhhH
Q 003594 616 ----------------------------------------------------------------------DQLNVRSDIR 625 (808)
Q Consensus 616 ----------------------------------------------------------------------~~~t~ksDVw 625 (808)
..++.++|||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Diw 232 (377)
T cd05629 153 KQHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWW 232 (377)
T ss_pred cccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeE
Confidence 2367889999
Q ss_pred hHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhcc-CCCCCCh--hhHHHHHHHHHHhhccCCCcC-ccccHHhhHHH
Q 003594 626 AFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDG-NAGIWPL--DLAEELAGIALKCLSADQDAN-RDLRIAGVMKE 700 (808)
Q Consensus 626 S~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~-~~~~~p~--~~~~~l~~Li~~Cl~~dp~p~-~Rps~~evl~~ 700 (808)
||||+||||+||.+||..... ...+..+... ....+|. .++.++.+|+.+||. +|..+ .|+++.+++..
T Consensus 233 SlGvil~elltG~~Pf~~~~~-----~~~~~~i~~~~~~~~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~~~~~l~h 305 (377)
T cd05629 233 SLGAIMFECLIGWPPFCSENS-----HETYRKIINWRETLYFPDDIHLSVEAEDLIRRLIT-NAENRLGRGGAHEIKSH 305 (377)
T ss_pred ecchhhhhhhcCCCCCCCCCH-----HHHHHHHHccCCccCCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCCHHHHhcC
Confidence 999999999999999964321 1222233221 1222332 467899999999997 63222 26788888764
No 102
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=3.4e-33 Score=307.03 Aligned_cols=211 Identities=23% Similarity=0.316 Sum_probs=171.7
Q ss_pred ccccCCceEEEEEEE--CCeEEEEEEccCC-----CCHHHHHHHHHHHhcc-CCCCccceeecccc--ceEEEEeecCCC
Q 003594 469 LKCAGDWTNVYRGRL--NHASVAIKTLNNG-----LSEEDFQAKVSFLTAV-RHPHLVAVMGCCSE--LKCIVFEYMPNG 538 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-----~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~~~lV~Ey~~~g 538 (808)
++|+|+||.||++.. +++.||+|++... .....+..|+.++.++ +||||+++++++.+ ..++||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~~ 81 (329)
T cd05618 2 VIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGG 81 (329)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCCC
Confidence 578999999999998 5789999998732 1234577899988877 89999999999855 789999999999
Q ss_pred CHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc---
Q 003594 539 NLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC--- 615 (808)
Q Consensus 539 sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~--- 615 (808)
+|..++. ....+++..+..|+.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 82 ~L~~~~~----------~~~~l~~~~~~~i~~qi~~~l~~lH~---~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~ 148 (329)
T cd05618 82 DLMFHMQ----------RQRKLPEEHARFYSAEISLALNYLHE---RGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLR 148 (329)
T ss_pred CHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCCEEEeeCCccccccC
Confidence 9999883 34569999999999999999999999 5699999999999999999999999998742
Q ss_pred ----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHH---hhhcHHHHHHHhccCCCCCChhh
Q 003594 616 ----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKA---MALDQTTLMQVLDGNAGIWPLDL 670 (808)
Q Consensus 616 ----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~---~~~~~~~~~~~ld~~~~~~p~~~ 670 (808)
..++.++|||||||++|+|++|++||...... .......+...+.......|...
T Consensus 149 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~~~~~p~~~ 228 (329)
T cd05618 149 PGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQIRIPRSL 228 (329)
T ss_pred CCCccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcCCCCCCCCC
Confidence 23577999999999999999999999532110 00111222233333444567778
Q ss_pred HHHHHHHHHHhhccCCCcCccccH
Q 003594 671 AEELAGIALKCLSADQDANRDLRI 694 (808)
Q Consensus 671 ~~~l~~Li~~Cl~~dp~p~~Rps~ 694 (808)
+..+.+|+.+||..| |..||++
T Consensus 229 ~~~~~~ll~~~L~~d--P~~R~~~ 250 (329)
T cd05618 229 SVKAASVLKSFLNKD--PKERLGC 250 (329)
T ss_pred CHHHHHHHHHHhcCC--HHHcCCC
Confidence 899999999999999 9999984
No 103
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=3.3e-33 Score=307.45 Aligned_cols=214 Identities=17% Similarity=0.239 Sum_probs=174.3
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccCC-----CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNNG-----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPN 537 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~ 537 (808)
.+.+|.|+||.||+|.+ ++..||||++... .....+.+|+.++..++||||+++++++.+ ..||||||++|
T Consensus 6 ~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~g 85 (333)
T cd05600 6 LTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAMEYVPG 85 (333)
T ss_pred EEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEEeCCCC
Confidence 35678999999999998 5789999999722 223568899999999999999999999865 78999999999
Q ss_pred CCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--
Q 003594 538 GNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-- 615 (808)
Q Consensus 538 gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-- 615 (808)
|+|.+++. ....+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||++..
T Consensus 86 ~~L~~~l~----------~~~~l~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~ 152 (333)
T cd05600 86 GDFRTLLN----------NLGVLSEDHARFYMAEMFEAVDALHE---LGYIHRDLKPENFLIDASGHIKLTDFGLSKGIV 152 (333)
T ss_pred CCHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEEEeCcCCcccc
Confidence 99999994 34568999999999999999999999 5699999999999999999999999998853
Q ss_pred --------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhcc----CCCCCC---h
Q 003594 616 --------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDG----NAGIWP---L 668 (808)
Q Consensus 616 --------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~----~~~~~p---~ 668 (808)
..++.++|||||||++|||++|.+||..... ...+..+... ..+.+. .
T Consensus 153 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~-----~~~~~~i~~~~~~~~~~~~~~~~~ 227 (333)
T cd05600 153 TYANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTP-----NETWENLKYWKETLQRPVYDDPRF 227 (333)
T ss_pred cccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCH-----HHHHHHHHhccccccCCCCCcccc
Confidence 2467899999999999999999999965321 1111111110 111111 2
Q ss_pred hhHHHHHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 669 DLAEELAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 669 ~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
.++.++.+|+.+||..+ |.+||++.+++..
T Consensus 228 ~~s~~~~~li~~~l~~~--~~rr~s~~~ll~h 257 (333)
T cd05600 228 NLSDEAWDLITKLINDP--SRRFGSLEDIKNH 257 (333)
T ss_pred ccCHHHHHHHHHHhhCh--hhhcCCHHHHHhC
Confidence 45789999999999977 8999998888764
No 104
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=3.7e-33 Score=305.75 Aligned_cols=209 Identities=21% Similarity=0.243 Sum_probs=169.7
Q ss_pred ccccCCceEEEEEEE--CCeEEEEEEccCC-----CCHHHHHHHHH-HHhccCCCCccceeecccc--ceEEEEeecCCC
Q 003594 469 LKCAGDWTNVYRGRL--NHASVAIKTLNNG-----LSEEDFQAKVS-FLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNG 538 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-----~~~~~~~~Ei~-il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~g 538 (808)
++|.|+||.||+|.+ +|+.||||++... .....+..|.. +++.++||||+++++++.+ ..|+||||+++|
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~g 81 (323)
T cd05575 2 VIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNGG 81 (323)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCCC
Confidence 578999999999998 6899999998721 12244555655 5678999999999998855 789999999999
Q ss_pred CHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc---
Q 003594 539 NLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC--- 615 (808)
Q Consensus 539 sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~--- 615 (808)
+|.+++. ....+++..+..|+.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 82 ~L~~~l~----------~~~~~~~~~~~~~~~qi~~~l~~lH~---~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~ 148 (323)
T cd05575 82 ELFFHLQ----------RERSFPEPRARFYAAEIASALGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIE 148 (323)
T ss_pred CHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHeEECCCCcEEEeccCCCccccc
Confidence 9999994 34578999999999999999999999 5699999999999999999999999998742
Q ss_pred ----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHH
Q 003594 616 ----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEE 673 (808)
Q Consensus 616 ----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~ 673 (808)
..++.++|||||||++|+|++|.+||..... ...+..++.. ....+...+..
T Consensus 149 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~-----~~~~~~i~~~-~~~~~~~~~~~ 222 (323)
T cd05575 149 HSKTTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT-----AEMYDNILNK-PLRLKPNISVS 222 (323)
T ss_pred CCCccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH-----HHHHHHHHcC-CCCCCCCCCHH
Confidence 2367889999999999999999999965321 1222333332 23345567889
Q ss_pred HHHHHHHhhccCCCcCccccHHhhH
Q 003594 674 LAGIALKCLSADQDANRDLRIAGVM 698 (808)
Q Consensus 674 l~~Li~~Cl~~dp~p~~Rps~~evl 698 (808)
+.+++.+||+.| |..||++.+.+
T Consensus 223 ~~~li~~~l~~~--p~~R~~~~~~~ 245 (323)
T cd05575 223 ARHLLEGLLQKD--RTKRLGAKDDF 245 (323)
T ss_pred HHHHHHHHhhcC--HHhCCCCCCCH
Confidence 999999999999 99999976433
No 105
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=8.9e-33 Score=303.87 Aligned_cols=225 Identities=20% Similarity=0.240 Sum_probs=176.9
Q ss_pred cccccccccccCCceEEEEEEE--CCeEEEEEEccCCCC---HHHHHHHHHHHhccCCCCccceeecccc--ceEEEEee
Q 003594 462 DFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEY 534 (808)
Q Consensus 462 ~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey 534 (808)
+|.. .+.+|.|+||.||++.+ +|..||+|.+..... ...+.+|+.+|.+++||||+++++++.+ ..++||||
T Consensus 6 ~y~~-~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 84 (331)
T cd06649 6 DFER-ISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEH 84 (331)
T ss_pred cceE-EEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEeec
Confidence 3443 35568999999999998 578999999874322 3579999999999999999999999855 78999999
Q ss_pred cCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCcc
Q 003594 535 MPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNI 614 (808)
Q Consensus 535 ~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~ 614 (808)
+++|+|.+++. ....+++..+..++.|++.||.|||+. .+|+||||||+|||++.++.+||+|||++.
T Consensus 85 ~~~~~L~~~l~----------~~~~~~~~~~~~~~~~i~~~l~~lH~~--~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~ 152 (331)
T cd06649 85 MDGGSLDQVLK----------EAKRIPEEILGKVSIAVLRGLAYLREK--HQIMHRDVKPSNILVNSRGEIKLCDFGVSG 152 (331)
T ss_pred CCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHhhc--CCEEcCCCChhhEEEcCCCcEEEccCcccc
Confidence 99999999994 335689999999999999999999983 259999999999999999999999999874
Q ss_pred c-----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhh---hc-----------------
Q 003594 615 C-----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMA---LD----------------- 651 (808)
Q Consensus 615 ~-----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~---~~----------------- 651 (808)
. ..++.++|||||||++|+|+||+.||........ ..
T Consensus 153 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (331)
T cd06649 153 QLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAKELEAIFGRPVVDGEEGEPHSISPR 232 (331)
T ss_pred cccccccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhcccccccccCCccccCcc
Confidence 2 2367899999999999999999999853211000 00
Q ss_pred ---------------------HHHHHHHhccCCCCCC-hhhHHHHHHHHHHhhccCCCcCccccHHhhHHHH
Q 003594 652 ---------------------QTTLMQVLDGNAGIWP-LDLAEELAGIALKCLSADQDANRDLRIAGVMKEL 701 (808)
Q Consensus 652 ---------------------~~~~~~~ld~~~~~~p-~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L 701 (808)
......+.....+..+ ..++.++.+|+.+||+.| |+.|||+.++++..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~--P~~Rpt~~ell~h~ 302 (331)
T cd06649 233 PRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKN--PAERADLKMLMNHT 302 (331)
T ss_pred cccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCC--cccCCCHHHHhcCh
Confidence 0001111111112222 246788999999999999 99999999998753
No 106
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=7.9e-33 Score=300.10 Aligned_cols=222 Identities=19% Similarity=0.294 Sum_probs=170.3
Q ss_pred ccccccccccccCCceEEEEEEE--CCeEEEEEEccCC---CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEe
Q 003594 461 EDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNG---LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFE 533 (808)
Q Consensus 461 ~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~---~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~E 533 (808)
++|.. .+.+|.|+||.||+|.. +++.||||++... .....+.+|+.+++.++||||+++++++.+ ..++|||
T Consensus 5 ~~y~~-~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 5 DSYEK-LEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred ccceE-eeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 34444 35668899999999998 6789999998722 223567899999999999999999999865 7899999
Q ss_pred ecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCc
Q 003594 534 YMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 613 (808)
Q Consensus 534 y~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla 613 (808)
|++ ++|.+++.. ....+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||++
T Consensus 84 ~~~-~~l~~~~~~---------~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~ 150 (303)
T cd07869 84 YVH-TDLCQYMDK---------HPGGLHPENVKLFLFQLLRGLSYIHQ---RYILHRDLKPQNLLISDTGELKLADFGLA 150 (303)
T ss_pred CCC-cCHHHHHHh---------CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECCCCcc
Confidence 996 788888843 23568899999999999999999999 56999999999999999999999999987
Q ss_pred cc--------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhc-cCCCC-
Q 003594 614 IC--------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLD-GNAGI- 665 (808)
Q Consensus 614 ~~--------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld-~~~~~- 665 (808)
.. ..++.++|||||||++|+|++|.+||.........- ......+. +....
T Consensus 151 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~-~~~~~~~~~~~~~~~ 229 (303)
T cd07869 151 RAKSVPSHTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQL-ERIFLVLGTPNEDTW 229 (303)
T ss_pred eeccCCCccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHH-HHHHHHhCCCChhhc
Confidence 42 125678999999999999999999996532110000 00000000 00000
Q ss_pred -----------------CC---------hhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 666 -----------------WP---------LDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 666 -----------------~p---------~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
.+ ...+..+.+|+.+||+.| |.+|||+.+++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~d--p~~R~s~~~~l~ 287 (303)
T cd07869 230 PGVHSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCF--PKNRLSAQAALS 287 (303)
T ss_pred cchhhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccC--chhccCHHHHhc
Confidence 00 013457889999999999 999999988874
No 107
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=3.9e-33 Score=312.80 Aligned_cols=217 Identities=18% Similarity=0.242 Sum_probs=174.5
Q ss_pred ccccccccCCceEEEEEEE--CCeEEEEEEccCC-----CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeec
Q 003594 465 ERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNG-----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYM 535 (808)
Q Consensus 465 ~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~ 535 (808)
...+.+|+|+||.||+|.. ++..||||++... .....+.+|+.++.+++|||||++++++.+ ..|+||||+
T Consensus 4 ~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E~~ 83 (381)
T cd05626 4 VKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYI 83 (381)
T ss_pred eEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEecC
Confidence 3456778999999999998 6789999999732 123568899999999999999999999965 789999999
Q ss_pred CCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc
Q 003594 536 PNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC 615 (808)
Q Consensus 536 ~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~ 615 (808)
+||+|.+++. ....+++..+..++.||+.||.|||+ .+|+||||||+||||+.++++||+|||++..
T Consensus 84 ~gg~L~~~l~----------~~~~~~e~~~~~~~~qi~~aL~~LH~---~givHrDlKp~Nili~~~~~~kL~DFGl~~~ 150 (381)
T cd05626 84 PGGDMMSLLI----------RMEVFPEVLARFYIAELTLAIESVHK---MGFIHRDIKPDNILIDLDGHIKLTDFGLCTG 150 (381)
T ss_pred CCCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCcHHHEEECCCCCEEEeeCcCCcc
Confidence 9999999994 34568999999999999999999999 6699999999999999999999999998520
Q ss_pred ------------------------------------------------------------------------CCCCcchh
Q 003594 616 ------------------------------------------------------------------------DQLNVRSD 623 (808)
Q Consensus 616 ------------------------------------------------------------------------~~~t~ksD 623 (808)
..++.++|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~D 230 (381)
T cd05626 151 FRWTHNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCD 230 (381)
T ss_pred cccccccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccc
Confidence 23678899
Q ss_pred hHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhcc-CCCCCC--hhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 624 IRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDG-NAGIWP--LDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 624 VwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~-~~~~~p--~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
||||||++|||+||.+||..... ......++.. ....+| ..++.++.+|+.+|+..++++..||++.+++.
T Consensus 231 iwSlG~il~elltG~~Pf~~~~~-----~~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~~~l~ 304 (381)
T cd05626 231 WWSVGVILFEMLVGQPPFLAPTP-----TETQLKVINWENTLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGADDIKA 304 (381)
T ss_pred eeehhhHHHHHHhCCCCCcCCCH-----HHHHHHHHccccccCCCCCCCCCHHHHHHHHHHccCcccccCCCCHHHHhc
Confidence 99999999999999999975321 1122223221 112222 24678999999996655545777999998875
No 108
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=1.1e-32 Score=294.41 Aligned_cols=225 Identities=26% Similarity=0.422 Sum_probs=182.3
Q ss_pred cccccCCceEEEEEEEC-------CeEEEEEEccCCCC---HHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeec
Q 003594 468 RLKCAGDWTNVYRGRLN-------HASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYM 535 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~~-------~~~vAiK~l~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~ 535 (808)
+.+|+|+||.||+|.+. +..||||.+..... .+.|.+|+.+|.+++||||+++++++.. ..++||||+
T Consensus 11 ~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~ 90 (280)
T cd05049 11 RELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPIMVFEYM 90 (280)
T ss_pred hhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeEEEEecC
Confidence 45688999999999862 36899999984332 3679999999999999999999999865 789999999
Q ss_pred CCCCHHHHHhhcccccc----ccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCC
Q 003594 536 PNGNLRDKLFTSQRNYK----NCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLG 611 (808)
Q Consensus 536 ~~gsL~~~l~~~~~~~~----~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfG 611 (808)
++|+|.+++........ .......+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 91 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~h~dlkp~nili~~~~~~kl~d~g 167 (280)
T cd05049 91 EHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLAS---QHFVHRDLATRNCLVGYDLVVKIGDFG 167 (280)
T ss_pred CCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhh---CCeeccccccceEEEcCCCeEEECCcc
Confidence 99999999965421100 00234568999999999999999999999 569999999999999999999999999
Q ss_pred Cccc---------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCC
Q 003594 612 LNIC---------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNA 663 (808)
Q Consensus 612 la~~---------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~ 663 (808)
++.. ..++.++|||||||++|+|++ |..||..... ......+..+..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~-----~~~~~~~~~~~~ 242 (280)
T cd05049 168 MSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSN-----EEVIECITQGRL 242 (280)
T ss_pred cceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCH-----HHHHHHHHcCCc
Confidence 8742 235778999999999999998 9999864321 122233333344
Q ss_pred CCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHH
Q 003594 664 GIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELD 702 (808)
Q Consensus 664 ~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~ 702 (808)
...+..++..+.+++.+||..| |..||++.+|++.|+
T Consensus 243 ~~~~~~~~~~~~~li~~~l~~~--p~~Rp~~~eil~~l~ 279 (280)
T cd05049 243 LQRPRTCPSEVYDIMLGCWKRD--PQQRINIKDIHERLQ 279 (280)
T ss_pred CCCCCCCCHHHHHHHHHHcCCC--cccCCCHHHHHHHhh
Confidence 4455678899999999999999 999999999999885
No 109
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=9e-33 Score=302.37 Aligned_cols=206 Identities=21% Similarity=0.254 Sum_probs=168.0
Q ss_pred ccccCCceEEEEEEE--CCeEEEEEEccCC-----CCHHHHHHHHH-HHhccCCCCccceeecccc--ceEEEEeecCCC
Q 003594 469 LKCAGDWTNVYRGRL--NHASVAIKTLNNG-----LSEEDFQAKVS-FLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNG 538 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-----~~~~~~~~Ei~-il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~g 538 (808)
++|+|+||.||+|.. +|..||+|++... .....+..|.. +++.++||||+++++++.+ ..|+||||+++|
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (321)
T cd05603 2 VIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNGG 81 (321)
T ss_pred eeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCCC
Confidence 578999999999998 5789999998621 12344556654 6788999999999998865 789999999999
Q ss_pred CHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc---
Q 003594 539 NLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC--- 615 (808)
Q Consensus 539 sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~--- 615 (808)
+|..++. ....+++..+..|+.||+.||.|||+ .+|+||||||+|||++.++.+||+|||++..
T Consensus 82 ~L~~~l~----------~~~~~~~~~~~~~~~qi~~~L~~lH~---~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 148 (321)
T cd05603 82 ELFFHLQ----------RERCFLEPRARFYAAEVASAIGYLHS---LNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVE 148 (321)
T ss_pred CHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEccCCCCccCCC
Confidence 9999883 34568889999999999999999999 5699999999999999999999999998742
Q ss_pred ----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHH
Q 003594 616 ----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEE 673 (808)
Q Consensus 616 ----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~ 673 (808)
..++.++|||||||++|+|++|.+||...+. ......++ .....+|...+..
T Consensus 149 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~~~~i~-~~~~~~~~~~~~~ 222 (321)
T cd05603 149 PEETTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV-----SQMYDNIL-HKPLQLPGGKTVA 222 (321)
T ss_pred CCCccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH-----HHHHHHHh-cCCCCCCCCCCHH
Confidence 2367899999999999999999999965321 11222222 2334556677889
Q ss_pred HHHHHHHhhccCCCcCccccHH
Q 003594 674 LAGIALKCLSADQDANRDLRIA 695 (808)
Q Consensus 674 l~~Li~~Cl~~dp~p~~Rps~~ 695 (808)
+.+++.+||+.| |.+||++.
T Consensus 223 ~~~li~~~l~~~--p~~R~~~~ 242 (321)
T cd05603 223 ACDLLVGLLHKD--QRRRLGAK 242 (321)
T ss_pred HHHHHHHHccCC--HhhcCCCC
Confidence 999999999999 89999864
No 110
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.1e-33 Score=293.71 Aligned_cols=213 Identities=21% Similarity=0.293 Sum_probs=177.7
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccCC-----CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNNG-----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPN 537 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~ 537 (808)
.+.+|.|.||.|-++.. .|+.||||.++.+ .+.-.+.+|++||+.|+||||+.+|.+|.+ ...|||||..+
T Consensus 58 ~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIvivMEYaS~ 137 (668)
T KOG0611|consen 58 TETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIVMEYASG 137 (668)
T ss_pred HHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEEEEecCC
Confidence 34568999999999987 6899999999832 223468899999999999999999999976 78999999999
Q ss_pred CCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--
Q 003594 538 GNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-- 615 (808)
Q Consensus 538 gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-- 615 (808)
|.|+||+ .....|++..+..|+.||.+|+.|+|.+ +++|||||.+|||||.|+++||+|||++..
T Consensus 138 GeLYDYi----------Ser~~LsErEaRhfFRQIvSAVhYCHkn---rVvHRDLKLENILLD~N~NiKIADFGLSNly~ 204 (668)
T KOG0611|consen 138 GELYDYI----------SERGSLSEREARHFFRQIVSAVHYCHKN---RVVHRDLKLENILLDQNNNIKIADFGLSNLYA 204 (668)
T ss_pred ccHHHHH----------HHhccccHHHHHHHHHHHHHHHHHHhhc---cceecccchhheeecCCCCeeeeccchhhhhc
Confidence 9999999 4567899999999999999999999995 599999999999999999999999999843
Q ss_pred -----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHH
Q 003594 616 -----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAE 672 (808)
Q Consensus 616 -----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~ 672 (808)
..-++.+|-|||||+||.|+.|..||+..+. ...+.++-.+.. ..+..+.
T Consensus 205 ~~kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dh-----k~lvrQIs~GaY--rEP~~PS 277 (668)
T KOG0611|consen 205 DKKFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDH-----KRLVRQISRGAY--REPETPS 277 (668)
T ss_pred cccHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchH-----HHHHHHhhcccc--cCCCCCc
Confidence 1236889999999999999999999987432 222333333321 1224566
Q ss_pred HHHHHHHHhhccCCCcCccccHHhhHHHH
Q 003594 673 ELAGIALKCLSADQDANRDLRIAGVMKEL 701 (808)
Q Consensus 673 ~l~~Li~~Cl~~dp~p~~Rps~~evl~~L 701 (808)
....||.+||..| |.+|.|+.+|....
T Consensus 278 dA~gLIRwmLmVN--P~RRATieDiAsHW 304 (668)
T KOG0611|consen 278 DASGLIRWMLMVN--PERRATIEDIASHW 304 (668)
T ss_pred hHHHHHHHHHhcC--cccchhHHHHhhhh
Confidence 7889999999999 89999988887643
No 111
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.5e-32 Score=294.36 Aligned_cols=225 Identities=24% Similarity=0.379 Sum_probs=182.7
Q ss_pred cccccCCceEEEEEEEC-------CeEEEEEEccCCCC---HHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeec
Q 003594 468 RLKCAGDWTNVYRGRLN-------HASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYM 535 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~~-------~~~vAiK~l~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~ 535 (808)
+.+|.|+||.||+|.+. +..||||++..... ...|.+|+.++..++||||+++++++.+ ..++++||+
T Consensus 11 ~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~~~e~~ 90 (283)
T cd05091 11 EELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSMIFSYC 90 (283)
T ss_pred HHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEEEEEcC
Confidence 44578999999999872 36899999984332 2568899999999999999999999865 788999999
Q ss_pred CCCCHHHHHhhccccc------cccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEe
Q 003594 536 PNGNLRDKLFTSQRNY------KNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISG 609 (808)
Q Consensus 536 ~~gsL~~~l~~~~~~~------~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~D 609 (808)
++++|.+++....... ........+++..+..++.|++.||.|||+ .+|+||||||+|||+++++.+||+|
T Consensus 91 ~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~---~gi~H~dlkp~Nil~~~~~~~kl~D 167 (283)
T cd05091 91 SHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSS---HHVVHKDLATRNVLVFDKLNVKISD 167 (283)
T ss_pred CCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH---cCccccccchhheEecCCCceEecc
Confidence 9999999995321100 000123468999999999999999999999 5699999999999999999999999
Q ss_pred CCCccc---------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhcc
Q 003594 610 LGLNIC---------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDG 661 (808)
Q Consensus 610 fGla~~---------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~ 661 (808)
||+++. ..++.++|||||||++|||++ |.+||... ........+..+
T Consensus 168 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~-----~~~~~~~~i~~~ 242 (283)
T cd05091 168 LGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY-----SNQDVIEMIRNR 242 (283)
T ss_pred cccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCC-----CHHHHHHHHHcC
Confidence 998642 235678999999999999998 88887642 122334445555
Q ss_pred CCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHH
Q 003594 662 NAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELD 702 (808)
Q Consensus 662 ~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~ 702 (808)
.....+..++..+.+|+.+||+.+ |..||++.+|+..|+
T Consensus 243 ~~~~~~~~~~~~~~~li~~cl~~~--p~~RP~~~~i~~~l~ 281 (283)
T cd05091 243 QVLPCPDDCPAWVYTLMLECWNEF--PSRRPRFKDIHSRLR 281 (283)
T ss_pred CcCCCCCCCCHHHHHHHHHHhCCC--cccCCCHHHHHHHhh
Confidence 555667789999999999999999 999999999999886
No 112
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=3.2e-33 Score=310.15 Aligned_cols=212 Identities=18% Similarity=0.271 Sum_probs=170.1
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCCCC---HHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCH
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNL 540 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL 540 (808)
+.+|.|+||.||+|.+ +|+.||||++..... ...+.+|+.+++.++||||+++++++.+ ..++||||+++|+|
T Consensus 80 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 159 (353)
T PLN00034 80 NRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMDGGSL 159 (353)
T ss_pred hhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCCCCcc
Confidence 4578999999999998 579999999974322 3578899999999999999999999865 78999999999998
Q ss_pred HHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-----
Q 003594 541 RDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC----- 615 (808)
Q Consensus 541 ~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~----- 615 (808)
.+.. .+++..+..|+.||+.||.|||+ .+|+||||||+|||++.++.+||+|||++..
T Consensus 160 ~~~~--------------~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~ 222 (353)
T PLN00034 160 EGTH--------------IADEQFLADVARQILSGIAYLHR---RHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM 222 (353)
T ss_pred cccc--------------cCCHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCEEEcccccceeccccc
Confidence 6532 24567788999999999999999 5699999999999999999999999998742
Q ss_pred ---------------C----------CCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhh
Q 003594 616 ---------------D----------QLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDL 670 (808)
Q Consensus 616 ---------------~----------~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~ 670 (808)
+ ..+.++|||||||++|||++|+.||...... ........+........+..+
T Consensus 223 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 300 (353)
T PLN00034 223 DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQG--DWASLMCAICMSQPPEAPATA 300 (353)
T ss_pred ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCc--cHHHHHHHHhccCCCCCCCcc
Confidence 0 0134899999999999999999999732110 001111222222334455677
Q ss_pred HHHHHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 671 AEELAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 671 ~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
+.++.+|+.+||..| |..||++.++++.
T Consensus 301 ~~~l~~li~~~l~~~--P~~Rpt~~ell~h 328 (353)
T PLN00034 301 SREFRHFISCCLQRE--PAKRWSAMQLLQH 328 (353)
T ss_pred CHHHHHHHHHHccCC--hhhCcCHHHHhcC
Confidence 889999999999999 9999999998863
No 113
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=9.6e-33 Score=296.47 Aligned_cols=218 Identities=16% Similarity=0.183 Sum_probs=169.7
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccCC----CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNNG----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNG 538 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~g 538 (808)
.+.+|.|+||.||+|.+ ++..||||++... ...+.+.+|+.++..++||||++++++|.+ ..++||||++++
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 85 (287)
T cd07848 6 LGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFEYVEKN 85 (287)
T ss_pred EEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEecCCCC
Confidence 45678999999999998 4789999998732 234678899999999999999999999865 789999999987
Q ss_pred CHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc---
Q 003594 539 NLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC--- 615 (808)
Q Consensus 539 sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~--- 615 (808)
.|..+. .....+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||++..
T Consensus 86 ~l~~~~----------~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 152 (287)
T cd07848 86 MLELLE----------EMPNGVPPEKVRSYIYQLIKAIHWCHK---NDIVHRDIKPENLLISHNDVLKLCDFGFARNLSE 152 (287)
T ss_pred HHHHHH----------hcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEeeccCcccccc
Confidence 776554 233568999999999999999999999 5699999999999999999999999998742
Q ss_pred -----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhh----------cHHHHHHHh-cc
Q 003594 616 -----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMAL----------DQTTLMQVL-DG 661 (808)
Q Consensus 616 -----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~----------~~~~~~~~l-d~ 661 (808)
..++.++|||||||++|+|++|++||......... ....+.... ++
T Consensus 153 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd07848 153 GSNANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNP 232 (287)
T ss_pred cccccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccc
Confidence 24678899999999999999999999642210000 000000000 00
Q ss_pred C--CC-------------CCChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 662 N--AG-------------IWPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 662 ~--~~-------------~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
. .. .+....+..+.+|+.+||+.| |..|||+.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~--P~~R~s~~~~l~ 283 (287)
T cd07848 233 RFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLN--PTDRYLTEQCLN 283 (287)
T ss_pred hhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCC--cccCCCHHHHhc
Confidence 0 00 011135678999999999999 999999998874
No 114
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=7.4e-33 Score=302.57 Aligned_cols=206 Identities=22% Similarity=0.291 Sum_probs=170.3
Q ss_pred ccccCCceEEEEEEE--CCeEEEEEEccC-----CCCHHHHHHHHHHHhcc-CCCCccceeecccc--ceEEEEeecCCC
Q 003594 469 LKCAGDWTNVYRGRL--NHASVAIKTLNN-----GLSEEDFQAKVSFLTAV-RHPHLVAVMGCCSE--LKCIVFEYMPNG 538 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~--~~~~vAiK~l~~-----~~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~~~lV~Ey~~~g 538 (808)
++|+|+||.||+|.+ +|..||+|++.. ......+..|..++..+ +||||+++++++.+ ..|+||||+++|
T Consensus 2 ~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~g 81 (316)
T cd05620 2 VLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNGG 81 (316)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCCC
Confidence 578999999999998 578999999973 22345677788888764 89999999999865 789999999999
Q ss_pred CHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc---
Q 003594 539 NLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC--- 615 (808)
Q Consensus 539 sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~--- 615 (808)
+|.+++. ....+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 82 ~L~~~i~----------~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~ 148 (316)
T cd05620 82 DLMFHIQ----------DKGRFDLYRATFYAAEIVCGLQFLHS---KGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVF 148 (316)
T ss_pred cHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEeCccCCCeeccc
Confidence 9999984 34568999999999999999999999 5699999999999999999999999998742
Q ss_pred ----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHH
Q 003594 616 ----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEE 673 (808)
Q Consensus 616 ----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~ 673 (808)
..++.++|||||||++|+|++|+.||..... ..+...+.......|..++.+
T Consensus 149 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~------~~~~~~~~~~~~~~~~~~~~~ 222 (316)
T cd05620 149 GDNRASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE------DELFESIRVDTPHYPRWITKE 222 (316)
T ss_pred CCCceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH------HHHHHHHHhCCCCCCCCCCHH
Confidence 2467899999999999999999999964321 122222222334556667889
Q ss_pred HHHHHHHhhccCCCcCccccHH
Q 003594 674 LAGIALKCLSADQDANRDLRIA 695 (808)
Q Consensus 674 l~~Li~~Cl~~dp~p~~Rps~~ 695 (808)
+.+|+.+||+.| |.+||++.
T Consensus 223 ~~~li~~~l~~d--P~~R~~~~ 242 (316)
T cd05620 223 SKDILEKLFERD--PTRRLGVV 242 (316)
T ss_pred HHHHHHHHccCC--HHHcCCCh
Confidence 999999999999 99999974
No 115
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=1.6e-32 Score=305.87 Aligned_cols=215 Identities=17% Similarity=0.253 Sum_probs=170.8
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccCC-----CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNNG-----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPN 537 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~ 537 (808)
.+.+|.|+||.||++.. +++.||||++... .....+.+|+.++..++||||+++++++.+ ..||||||++|
T Consensus 6 ~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~E~~~g 85 (363)
T cd05628 6 LKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIMEFLPG 85 (363)
T ss_pred eEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEEcCCCC
Confidence 45678999999999998 5789999999731 223567889999999999999999999866 78999999999
Q ss_pred CCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--
Q 003594 538 GNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-- 615 (808)
Q Consensus 538 gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-- 615 (808)
|+|.+++. ....+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 86 g~L~~~l~----------~~~~l~~~~~~~~~~qi~~aL~~lH~---~givHrDlKp~NILi~~~~~vkL~DFGla~~~~ 152 (363)
T cd05628 86 GDMMTLLM----------KKDTLTEEETQFYIAETVLAIDSIHQ---LGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLK 152 (363)
T ss_pred CcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHh---CCeEecCCCHHHeEECCCCCEEEeeccCccccc
Confidence 99999994 34578999999999999999999999 6699999999999999999999999998631
Q ss_pred ----------------------------------------------------------CCCCcchhhHhHHHHHHHHHcC
Q 003594 616 ----------------------------------------------------------DQLNVRSDIRAFGTLLLHLLTG 637 (808)
Q Consensus 616 ----------------------------------------------------------~~~t~ksDVwS~Gvil~elltG 637 (808)
..++.++|||||||++|||++|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G 232 (363)
T cd05628 153 KAHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIG 232 (363)
T ss_pred ccccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhC
Confidence 2357889999999999999999
Q ss_pred CCCchhhHHHhhhcHHHHHHHhcc-CCCCCCh--hhHHHHHHHHHHhhccCCCc-CccccHHhhHHH
Q 003594 638 RNWAGLVEKAMALDQTTLMQVLDG-NAGIWPL--DLAEELAGIALKCLSADQDA-NRDLRIAGVMKE 700 (808)
Q Consensus 638 ~~P~~~~~~~~~~~~~~~~~~ld~-~~~~~p~--~~~~~l~~Li~~Cl~~dp~p-~~Rps~~evl~~ 700 (808)
++||..... ...+..+... ....+|. ..+.++.+++.+++. +|.+ -.||++.+|++.
T Consensus 233 ~~Pf~~~~~-----~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~~~~r~~r~~~~ei~~h 293 (363)
T cd05628 233 YPPFCSETP-----QETYKKVMNWKETLIFPPEVPISEKAKDLILRFCC-EWEHRIGAPGVEEIKTN 293 (363)
T ss_pred CCCCCCCCH-----HHHHHHHHcCcCcccCCCcCCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhCC
Confidence 999964321 1222333321 1112222 357889999998664 3222 357898888764
No 116
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=1.2e-32 Score=298.79 Aligned_cols=231 Identities=23% Similarity=0.409 Sum_probs=182.5
Q ss_pred cccccCCceEEEEEEE--CCe--EEEEEEccCCC---CHHHHHHHHHHHhcc-CCCCccceeecccc--ceEEEEeecCC
Q 003594 468 RLKCAGDWTNVYRGRL--NHA--SVAIKTLNNGL---SEEDFQAKVSFLTAV-RHPHLVAVMGCCSE--LKCIVFEYMPN 537 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~--~vAiK~l~~~~---~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~~~lV~Ey~~~ 537 (808)
..+|+|+||.||+|.+ ++. .+|+|.+.... ....|.+|+.++.++ +||||+++++++.+ ..|+||||+++
T Consensus 13 ~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 92 (303)
T cd05088 13 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 92 (303)
T ss_pred eeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEEEEeCCC
Confidence 4578899999999997 443 56888876322 235788999999999 89999999999865 78999999999
Q ss_pred CCHHHHHhhccccccc------cccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCC
Q 003594 538 GNLRDKLFTSQRNYKN------CSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLG 611 (808)
Q Consensus 538 gsL~~~l~~~~~~~~~------~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfG 611 (808)
|+|.+++......... ......+++..++.++.||+.||+|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 93 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~gi~H~dlkp~Nili~~~~~~kl~dfg 169 (303)
T cd05088 93 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFG 169 (303)
T ss_pred CcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHh---CCccccccchheEEecCCCcEEeCccc
Confidence 9999999654211000 0122468999999999999999999999 669999999999999999999999999
Q ss_pred Cccc------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCCCCC
Q 003594 612 LNIC------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNAGIW 666 (808)
Q Consensus 612 la~~------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~~~~ 666 (808)
++.. ..++.++|||||||++|+|+| |.+||..... ......+........
T Consensus 170 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~-----~~~~~~~~~~~~~~~ 244 (303)
T cd05088 170 LSRGQEVYVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC-----AELYEKLPQGYRLEK 244 (303)
T ss_pred cCcccchhhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCCh-----HHHHHHHhcCCcCCC
Confidence 8742 235788999999999999998 9999864221 112222323333344
Q ss_pred ChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHHHHhc
Q 003594 667 PLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVRKKA 708 (808)
Q Consensus 667 p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~~~~ 708 (808)
+...+..+.+|+.+||..+ |..||++.+++..|+.+...-
T Consensus 245 ~~~~~~~~~~li~~~l~~~--p~~Rp~~~~il~~l~~~~~~~ 284 (303)
T cd05088 245 PLNCDDEVYDLMRQCWREK--PYERPSFAQILVSLNRMLEER 284 (303)
T ss_pred CCCCCHHHHHHHHHHcCCC--hhhCcCHHHHHHHHHHHHHhh
Confidence 5567789999999999999 999999999999999886543
No 117
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=1.3e-32 Score=292.47 Aligned_cols=217 Identities=23% Similarity=0.297 Sum_probs=171.2
Q ss_pred ccccCCceEEEEEEE-C---CeEEEEEEccCCCC---HHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCC
Q 003594 469 LKCAGDWTNVYRGRL-N---HASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGN 539 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~-~---~~~vAiK~l~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gs 539 (808)
.+|+|+||.||+|.. + ...+|+|.+..... ...|.+|+.+++.++||||++++++|.+ ..++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 368899999999976 2 35789998763322 3568899999999999999999999865 7899999999999
Q ss_pred HHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc----
Q 003594 540 LRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC---- 615 (808)
Q Consensus 540 L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~---- 615 (808)
|.+++..... ......++.....++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||++..
T Consensus 82 L~~~l~~~~~-----~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~ 153 (269)
T cd05042 82 LKNYLRSNRG-----MVAQMAQKDVLQRMACEVASGLLWLHQ---ADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPE 153 (269)
T ss_pred HHHHHHhccc-----cccccccHHHHHHHHHHHHHHHHHHHh---cCEecccccHhheEecCCCcEEEeccccccccccc
Confidence 9999965421 112345788889999999999999999 6699999999999999999999999998742
Q ss_pred ------------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhcc---
Q 003594 616 ------------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDG--- 661 (808)
Q Consensus 616 ------------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~--- 661 (808)
..++.++|||||||++|||++ |.+||..... ...+...+..
T Consensus 154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-----~~~~~~~~~~~~~ 228 (269)
T cd05042 154 DYYITKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSD-----EQVLKQVVREQDI 228 (269)
T ss_pred hheeccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCH-----HHHHHHHhhccCc
Confidence 023568999999999999999 7888864321 1122222221
Q ss_pred --CCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHH
Q 003594 662 --NAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKEL 701 (808)
Q Consensus 662 --~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L 701 (808)
..+.++..++..+..++..|| .| |..||++.+|++.|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~-~d--p~~Rpt~~~v~~~l 267 (269)
T cd05042 229 KLPKPQLDLKYSDRWYEVMQFCW-LD--PETRPTAEEVHELL 267 (269)
T ss_pred cCCCCcccccCCHHHHHHHHHHh-cC--cccccCHHHHHHHh
Confidence 122344467788899999999 47 99999999999876
No 118
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=9.1e-33 Score=304.67 Aligned_cols=231 Identities=23% Similarity=0.354 Sum_probs=181.4
Q ss_pred ccccccCCceEEEEEEEC-------CeEEEEEEccCCCC---HHHHHHHHHHHhcc-CCCCccceeecccc---ceEEEE
Q 003594 467 FRLKCAGDWTNVYRGRLN-------HASVAIKTLNNGLS---EEDFQAKVSFLTAV-RHPHLVAVMGCCSE---LKCIVF 532 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~~-------~~~vAiK~l~~~~~---~~~~~~Ei~il~~l-~HpnIv~l~g~~~~---~~~lV~ 532 (808)
.+++|.|+||.||+|.+. ++.||+|++..... .+.+..|+.++.++ +||||++++++|.. ..++||
T Consensus 12 ~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~~~~~v~ 91 (337)
T cd05054 12 GKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 91 (337)
T ss_pred hcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCCCEEEEE
Confidence 467789999999999752 36899999974332 24677899999999 89999999998853 678999
Q ss_pred eecCCCCHHHHHhhccccccc---------------------------------------------------cccCCCCC
Q 003594 533 EYMPNGNLRDKLFTSQRNYKN---------------------------------------------------CSRARALR 561 (808)
Q Consensus 533 Ey~~~gsL~~~l~~~~~~~~~---------------------------------------------------~~~~~~l~ 561 (808)
||+++|+|.+++......... ......++
T Consensus 92 ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 171 (337)
T cd05054 92 EYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLT 171 (337)
T ss_pred ecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHHhhcCCC
Confidence 999999999999643210000 00123789
Q ss_pred HHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--------------------------
Q 003594 562 WLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-------------------------- 615 (808)
Q Consensus 562 ~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-------------------------- 615 (808)
|..+..|+.||+.||.|||+ .+|+||||||+|||++.++.+||+|||++..
T Consensus 172 ~~~~~~~~~qi~~aL~~lH~---~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~ 248 (337)
T cd05054 172 LEDLISYSFQVARGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPESIF 248 (337)
T ss_pred HHHHHHHHHHHHHHHHHHHh---CCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccccCcHHhc
Confidence 99999999999999999999 5699999999999999999999999998752
Q ss_pred -CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHHHHHHHHHhhccCCCcCcccc
Q 003594 616 -DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAGIALKCLSADQDANRDLR 693 (808)
Q Consensus 616 -~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps 693 (808)
..++.++|||||||+||+|++ |.+||..... .......+........|...+.++.+++.+||+.+ |..||+
T Consensus 249 ~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~cl~~~--p~~RPs 322 (337)
T cd05054 249 DKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQI----DEEFCRRLKEGTRMRAPEYATPEIYSIMLDCWHNN--PEDRPT 322 (337)
T ss_pred CCCCCccccHHHHHHHHHHHHHcCCCCCCCCCc----cHHHHHHHhccCCCCCCccCCHHHHHHHHHHccCC--hhhCcC
Confidence 235678999999999999998 9999854211 11111122222333445567789999999999999 999999
Q ss_pred HHhhHHHHHHHHH
Q 003594 694 IAGVMKELDEVRK 706 (808)
Q Consensus 694 ~~evl~~L~~l~~ 706 (808)
+.+|++.|+.+..
T Consensus 323 ~~ell~~l~~~~~ 335 (337)
T cd05054 323 FSELVEILGDLLQ 335 (337)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999998754
No 119
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=8.9e-33 Score=297.14 Aligned_cols=218 Identities=20% Similarity=0.285 Sum_probs=176.2
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccCC-----CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNNG-----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPN 537 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~ 537 (808)
.+++|.|+||.||++.. +++.||||++... .....+.+|+.+++.++||||+++++++.+ ..++||||+++
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 84 (285)
T cd05605 5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNG 84 (285)
T ss_pred EEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEeccCC
Confidence 45678999999999998 5789999998632 123457889999999999999999999865 78999999999
Q ss_pred CCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--
Q 003594 538 GNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-- 615 (808)
Q Consensus 538 gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-- 615 (808)
|+|.+++... ....+++..+..++.|++.||.|||+ .+|+||||||+||++++++.++|+|||++..
T Consensus 85 ~~L~~~~~~~--------~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~ 153 (285)
T cd05605 85 GDLKFHIYNM--------GNPGFDEERAVFYAAEITCGLEDLHR---ERIVYRDLKPENILLDDYGHIRISDLGLAVEIP 153 (285)
T ss_pred CcHHHHHHhc--------CcCCCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCHHHEEECCCCCEEEeeCCCceecC
Confidence 9999988532 23568999999999999999999999 5699999999999999999999999998753
Q ss_pred ----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHH
Q 003594 616 ----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEE 673 (808)
Q Consensus 616 ----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~ 673 (808)
..++.++|||||||++|+|++|+.||...... .....+...+......++..++..
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 231 (285)
T cd05605 154 EGETIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEK--VKREEVERRVKEDQEEYSEKFSEA 231 (285)
T ss_pred CCCccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchh--hHHHHHHHHhhhcccccCcccCHH
Confidence 23567899999999999999999999753211 111122222333344456678889
Q ss_pred HHHHHHHhhccCCCcCccc-----cHHhhHH
Q 003594 674 LAGIALKCLSADQDANRDL-----RIAGVMK 699 (808)
Q Consensus 674 l~~Li~~Cl~~dp~p~~Rp-----s~~evl~ 699 (808)
+.+|+.+||..| |..|| ++.+++.
T Consensus 232 ~~~li~~~l~~~--P~~R~~~~~~~~~~l~~ 260 (285)
T cd05605 232 ARSICRQLLTKD--PGFRLGCRGEGAEEVKA 260 (285)
T ss_pred HHHHHHHHccCC--HHHhcCCCCCCHHHHhc
Confidence 999999999999 99999 6556543
No 120
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=8.1e-33 Score=304.19 Aligned_cols=218 Identities=17% Similarity=0.219 Sum_probs=169.2
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccCC----CCHHHHHHHHHHHhccCCCCccceeecccc-------ceEEEEe
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNNG----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE-------LKCIVFE 533 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-------~~~lV~E 533 (808)
.+.+|.|+||.||+|.. +|..||||++... .....+.+|+.++++++||||+++++++.. ..|+|||
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~lv~e 84 (338)
T cd07859 5 QEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIYVVFE 84 (338)
T ss_pred EEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEEEEEe
Confidence 35678999999999998 5799999998721 223568899999999999999999998732 4799999
Q ss_pred ecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCc
Q 003594 534 YMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 613 (808)
Q Consensus 534 y~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla 613 (808)
|+. ++|.+++. ....+++..+..|+.||+.||.|||+ .+|+||||||+|||++.++.+||+|||++
T Consensus 85 ~~~-~~L~~~l~----------~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~NIll~~~~~~kL~Dfg~~ 150 (338)
T cd07859 85 LME-SDLHQVIK----------ANDDLTPEHHQFFLYQLLRALKYIHT---ANVFHRDLKPKNILANADCKLKICDFGLA 150 (338)
T ss_pred cCC-CCHHHHHH----------hcccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEccCccc
Confidence 995 79999883 34569999999999999999999999 56999999999999999999999999987
Q ss_pred cc------------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhh--------------
Q 003594 614 IC------------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMA-------------- 649 (808)
Q Consensus 614 ~~------------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~-------------- 649 (808)
+. ..++.++|||||||++|+|+||++||........
T Consensus 151 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 230 (338)
T cd07859 151 RVAFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPE 230 (338)
T ss_pred cccccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 42 1356789999999999999999999853211000
Q ss_pred ----hcHHHHHHHhcc----CCCCC---ChhhHHHHHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 650 ----LDQTTLMQVLDG----NAGIW---PLDLAEELAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 650 ----~~~~~~~~~ld~----~~~~~---p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
.........+.. ....+ ....+..+.+++.+||..| |..||++.+++..
T Consensus 231 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~--P~~Rpt~~e~l~h 290 (338)
T cd07859 231 TISRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFD--PKDRPTAEEALAD 290 (338)
T ss_pred HHHHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcC--cccCCCHHHHhcC
Confidence 000000111111 01110 1134677899999999999 9999999998853
No 121
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=1.3e-32 Score=294.72 Aligned_cols=218 Identities=20% Similarity=0.270 Sum_probs=172.7
Q ss_pred cccCCceEEEEEEE--CCeEEEEEEccCC-----CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCH
Q 003594 470 KCAGDWTNVYRGRL--NHASVAIKTLNNG-----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNL 540 (808)
Q Consensus 470 ~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL 540 (808)
+|+|+||.||++.. +|+.||+|.+... .....+..|++++.+++||||+++++++.+ ..++||||++||+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 47899999999987 5899999998621 123456679999999999999999998865 78999999999999
Q ss_pred HHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-----
Q 003594 541 RDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC----- 615 (808)
Q Consensus 541 ~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~----- 615 (808)
.+++... ....+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.++|+|||++..
T Consensus 81 ~~~~~~~--------~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~ 149 (277)
T cd05607 81 KYHIYNV--------GERGLEMERVIHYSAQITCGILHLHS---MDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK 149 (277)
T ss_pred HHHHHhc--------cccCCCHHHHHHHHHHHHHHHHHHHH---CCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc
Confidence 9988543 33458999999999999999999999 6699999999999999999999999998742
Q ss_pred -------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHHHHH
Q 003594 616 -------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAG 676 (808)
Q Consensus 616 -------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~ 676 (808)
..++.++|||||||++|+|++|++||....... .........+..........++.++.+
T Consensus 150 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (277)
T cd05607 150 TITQRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKV-AKEELKRRTLEDEVKFEHQNFTEESKD 228 (277)
T ss_pred eeeccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchh-hHHHHHHHhhccccccccccCCHHHHH
Confidence 236789999999999999999999986422110 011111222222221122356789999
Q ss_pred HHHHhhccCCCcCccccHHhhHHHH
Q 003594 677 IALKCLSADQDANRDLRIAGVMKEL 701 (808)
Q Consensus 677 Li~~Cl~~dp~p~~Rps~~evl~~L 701 (808)
|+.+||+.| |..||++.++++.+
T Consensus 229 li~~~L~~~--P~~R~~~~~~~~~~ 251 (277)
T cd05607 229 ICRLFLAKK--PEDRLGSREKNDDP 251 (277)
T ss_pred HHHHHhccC--HhhCCCCccchhhh
Confidence 999999999 99999998776433
No 122
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.8e-32 Score=293.12 Aligned_cols=229 Identities=23% Similarity=0.338 Sum_probs=182.8
Q ss_pred hccccccccccccCCceEEEEEEEC-------CeEEEEEEccCCCC---HHHHHHHHHHHhccCCCCccceeecccc--c
Q 003594 460 TEDFSERFRLKCAGDWTNVYRGRLN-------HASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--L 527 (808)
Q Consensus 460 t~~f~~~~~i~g~G~~g~Vy~~~~~-------~~~vAiK~l~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~ 527 (808)
+++|... +.+|+|+||.||+|.+. +..||+|.+..... ...|.+|+.+++.++||||+++++++.+ .
T Consensus 5 ~~~~~~~-~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 5 RDSITLL-RALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP 83 (277)
T ss_pred HHHcEee-eECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 3445444 56689999999999983 36799999873322 3568999999999999999999998865 6
Q ss_pred eEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCc---c
Q 003594 528 KCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNL---V 604 (808)
Q Consensus 528 ~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~---~ 604 (808)
.++||||+++|+|.+++....... .....++|..++.++.||+.||.|||+ .+++||||||+|||++.++ .
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~---~~~~~~~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~nil~~~~~~~~~ 157 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRP---ERPSSLTMKDLLFCARDVAKGCKYLEE---NHFIHRDIAARNCLLTCKGPGRV 157 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCC---CCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccchheEEEeccCCCcc
Confidence 899999999999999996542110 122469999999999999999999999 5699999999999998654 6
Q ss_pred EEEEeCCCccc---------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHH
Q 003594 605 AKISGLGLNIC---------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLM 656 (808)
Q Consensus 605 ~kl~DfGla~~---------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~ 656 (808)
+||+|||+++. ..++.++|||||||++|+|++ |..||..... .....
T Consensus 158 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~-----~~~~~ 232 (277)
T cd05036 158 AKIADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTN-----QEVME 232 (277)
T ss_pred eEeccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH-----HHHHH
Confidence 99999998742 236789999999999999997 9999864221 12222
Q ss_pred HHhccCCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHH
Q 003594 657 QVLDGNAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELD 702 (808)
Q Consensus 657 ~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~ 702 (808)
.+.......+|..++..+.+++.+||+.+ |..||++.+|++.|+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~i~~cl~~~--p~~Rps~~~vl~~l~ 276 (277)
T cd05036 233 FVTGGGRLDPPKGCPGPVYRIMTDCWQHT--PEDRPNFATILERIQ 276 (277)
T ss_pred HHHcCCcCCCCCCCCHHHHHHHHHHcCCC--cccCcCHHHHHHHhh
Confidence 23333445566778899999999999999 999999999998875
No 123
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=2.2e-32 Score=293.31 Aligned_cols=225 Identities=25% Similarity=0.408 Sum_probs=179.2
Q ss_pred cccccCCceEEEEEEE------CCeEEEEEEccCCCC---HHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecC
Q 003594 468 RLKCAGDWTNVYRGRL------NHASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMP 536 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~------~~~~vAiK~l~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~ 536 (808)
+.+|+|+||.||+|.+ .+..||+|.+..... ...|.+|+.+++.++||||+++++++.. ..|+||||++
T Consensus 11 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 90 (283)
T cd05090 11 EELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCMLFEYLN 90 (283)
T ss_pred eeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEEEEEcCC
Confidence 4568999999999985 347899999974332 2568899999999999999999999855 7899999999
Q ss_pred CCCHHHHHhhcccccc-------ccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEe
Q 003594 537 NGNLRDKLFTSQRNYK-------NCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISG 609 (808)
Q Consensus 537 ~gsL~~~l~~~~~~~~-------~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~D 609 (808)
+|+|.+++........ .......+++...+.++.|++.||.|||+ .+|+||||||+|||++.++.+||+|
T Consensus 91 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~nili~~~~~~kl~d 167 (283)
T cd05090 91 QGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSS---HFFVHKDLAARNILIGEQLHVKISD 167 (283)
T ss_pred CCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---cCeehhccccceEEEcCCCcEEecc
Confidence 9999999964321000 00113458999999999999999999999 5699999999999999999999999
Q ss_pred CCCccc---------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhcc
Q 003594 610 LGLNIC---------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDG 661 (808)
Q Consensus 610 fGla~~---------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~ 661 (808)
||+++. ..++.++|||||||++|||++ |.+||..... ......+...
T Consensus 168 fg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~-----~~~~~~~~~~ 242 (283)
T cd05090 168 LGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN-----QEVIEMVRKR 242 (283)
T ss_pred ccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH-----HHHHHHHHcC
Confidence 998842 235788999999999999998 9999854211 1112222223
Q ss_pred CCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHH
Q 003594 662 NAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELD 702 (808)
Q Consensus 662 ~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~ 702 (808)
.....+..++..+.+++.+||..| |..||++.+|++.|.
T Consensus 243 ~~~~~~~~~~~~~~~li~~cl~~~--p~~Rp~~~~i~~~l~ 281 (283)
T cd05090 243 QLLPCSEDCPPRMYSLMTECWQEG--PSRRPRFKDIHTRLR 281 (283)
T ss_pred CcCCCCCCCCHHHHHHHHHHcccC--cccCcCHHHHHHHhh
Confidence 334456677899999999999999 999999999998875
No 124
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1e-32 Score=294.22 Aligned_cols=225 Identities=23% Similarity=0.353 Sum_probs=182.1
Q ss_pred cccccCCceEEEEEEECC-------eEEEEEEccCCCC---HHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeec
Q 003594 468 RLKCAGDWTNVYRGRLNH-------ASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYM 535 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~~~-------~~vAiK~l~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~ 535 (808)
..+|.|+||.||+|.+.+ ..||+|.+..... ...+.+|+.++..++||||+++++++.+ ..++||||+
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 91 (277)
T cd05032 12 RELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPTLVVMELM 91 (277)
T ss_pred eEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCcEEEEecC
Confidence 567899999999998732 6799999874332 3468899999999999999999999865 789999999
Q ss_pred CCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc
Q 003594 536 PNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC 615 (808)
Q Consensus 536 ~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~ 615 (808)
++|+|.+++...............++|..++.++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 92 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~di~p~nill~~~~~~kl~dfg~~~~ 168 (277)
T cd05032 92 AKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAA---KKFVHRDLAARNCMVAEDLTVKIGDFGMTRD 168 (277)
T ss_pred CCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHh---CCccccccChheEEEcCCCCEEECCcccchh
Confidence 9999999996542111100123458999999999999999999999 5699999999999999999999999998642
Q ss_pred ---------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCCCCCC
Q 003594 616 ---------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNAGIWP 667 (808)
Q Consensus 616 ---------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p 667 (808)
..++.++|||||||++|||+| |.+||..... ......+........|
T Consensus 169 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~-----~~~~~~~~~~~~~~~~ 243 (277)
T cd05032 169 IYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN-----EEVLKFVIDGGHLDLP 243 (277)
T ss_pred hccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCH-----HHHHHHHhcCCCCCCC
Confidence 246788999999999999998 9999854211 1222333344445566
Q ss_pred hhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHH
Q 003594 668 LDLAEELAGIALKCLSADQDANRDLRIAGVMKELD 702 (808)
Q Consensus 668 ~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~ 702 (808)
..++..+.+++.+||+.+ |..|||+.+++..|+
T Consensus 244 ~~~~~~~~~li~~~l~~~--p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 244 ENCPDKLLELMRMCWQYN--PKMRPTFLEIVSSLK 276 (277)
T ss_pred CCCCHHHHHHHHHHcCCC--hhhCCCHHHHHHHhc
Confidence 778899999999999999 999999999998875
No 125
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-34 Score=304.79 Aligned_cols=212 Identities=22% Similarity=0.316 Sum_probs=178.7
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEcc---CCCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCH
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLN---NGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNL 540 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~---~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL 540 (808)
..+|+|+||.||+|.+ +++.||||++. .....+++++|+.+|++++++||.++||.+.. .++++||||.||++
T Consensus 19 ~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey~~gGsv 98 (467)
T KOG0201|consen 19 ELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEYCGGGSV 98 (467)
T ss_pred hhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHHhcCcch
Confidence 5678999999999999 57899999998 23345789999999999999999999999855 78999999999999
Q ss_pred HHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-----
Q 003594 541 RDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC----- 615 (808)
Q Consensus 541 ~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~----- 615 (808)
.+.| .....+++..+.-|+.+++.||.|||. .+.+|||||+.|||+..+|.+||+|||.+..
T Consensus 99 ~~lL----------~~~~~~~E~~i~~ilre~l~~l~ylH~---~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~ 165 (467)
T KOG0201|consen 99 LDLL----------KSGNILDEFEIAVILREVLKGLDYLHS---EKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTV 165 (467)
T ss_pred hhhh----------ccCCCCccceeeeehHHHHHHhhhhhh---cceecccccccceeEeccCcEEEEecceeeeeechh
Confidence 9999 345556888888899999999999999 5699999999999999999999999999742
Q ss_pred --------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHHHH
Q 003594 616 --------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELA 675 (808)
Q Consensus 616 --------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~ 675 (808)
..|+.|+||||||++.+||.+|.||+..... ...+.-+-....+.....+++.+.
T Consensus 166 ~rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hP-----mrvlflIpk~~PP~L~~~~S~~~k 240 (467)
T KOG0201|consen 166 KRRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHP-----MRVLFLIPKSAPPRLDGDFSPPFK 240 (467)
T ss_pred hccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCc-----ceEEEeccCCCCCccccccCHHHH
Confidence 4689999999999999999999999875422 111111112233344447889999
Q ss_pred HHHHHhhccCCCcCccccHHhhHH
Q 003594 676 GIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 676 ~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
+++..||.+| |..||++.++++
T Consensus 241 EFV~~CL~k~--P~~RpsA~~LLK 262 (467)
T KOG0201|consen 241 EFVEACLDKN--PEFRPSAKELLK 262 (467)
T ss_pred HHHHHHhhcC--cccCcCHHHHhh
Confidence 9999999999 999999999885
No 126
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=2.1e-32 Score=290.91 Aligned_cols=219 Identities=26% Similarity=0.448 Sum_probs=180.6
Q ss_pred ccccccCCceEEEEEEE--C---CeEEEEEEccCCCC---HHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecC
Q 003594 467 FRLKCAGDWTNVYRGRL--N---HASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMP 536 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~---~~~vAiK~l~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~ 536 (808)
.+.+|.|+||.||+|.+ + +..||+|.+..... ...|.+|+.++.+++||||+++++++.+ ..++||||++
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 88 (267)
T cd05066 9 EKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYME 88 (267)
T ss_pred eeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEEEEcCC
Confidence 35678999999999987 2 24799999874332 3578999999999999999999999854 7899999999
Q ss_pred CCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-
Q 003594 537 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC- 615 (808)
Q Consensus 537 ~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~- 615 (808)
+|+|.+++.. ....+++..++.|+.|++.||.|||+ .+++||||||+|||++.++.++|+|||++..
T Consensus 89 ~~~L~~~~~~---------~~~~~~~~~~~~i~~~i~~~l~~lH~---~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~ 156 (267)
T cd05066 89 NGSLDAFLRK---------HDGQFTVIQLVGMLRGIASGMKYLSD---MGYVHRDLAARNILVNSNLVCKVSDFGLSRVL 156 (267)
T ss_pred CCCHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeehhhchhcEEECCCCeEEeCCCCccccc
Confidence 9999999953 23468999999999999999999999 6699999999999999999999999998742
Q ss_pred ---------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCCCCCC
Q 003594 616 ---------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNAGIWP 667 (808)
Q Consensus 616 ---------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p 667 (808)
..++.++||||||+++|++++ |..||..... ......+.+....+.+
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~ 231 (267)
T cd05066 157 EDDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSN-----QDVIKAIEEGYRLPAP 231 (267)
T ss_pred ccccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCH-----HHHHHHHhCCCcCCCC
Confidence 235678999999999999887 9999864321 1223333343344455
Q ss_pred hhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHH
Q 003594 668 LDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEV 704 (808)
Q Consensus 668 ~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l 704 (808)
..++..+.+++.+||+.+ |..||++.++++.|+++
T Consensus 232 ~~~~~~~~~li~~~l~~~--p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 232 MDCPAALHQLMLDCWQKD--RNERPKFEQIVSILDKL 266 (267)
T ss_pred CCCCHHHHHHHHHHcccC--chhCCCHHHHHHHHHhh
Confidence 567889999999999999 99999999999999864
No 127
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1.5e-32 Score=294.54 Aligned_cols=224 Identities=24% Similarity=0.396 Sum_probs=178.0
Q ss_pred ccccccCCceEEEEEEE------CCeEEEEEEccCCC--CHHHHHHHHHHHhccCCCCccceeecccc----ceEEEEee
Q 003594 467 FRLKCAGDWTNVYRGRL------NHASVAIKTLNNGL--SEEDFQAKVSFLTAVRHPHLVAVMGCCSE----LKCIVFEY 534 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~------~~~~vAiK~l~~~~--~~~~~~~Ei~il~~l~HpnIv~l~g~~~~----~~~lV~Ey 534 (808)
.+.+|.|+||.||+|.. ++..||||.+.... ....|.+|+.++++++||||+++++++.. ..++||||
T Consensus 9 ~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~ 88 (284)
T cd05081 9 IQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLRLVMEY 88 (284)
T ss_pred eeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceEEEEEe
Confidence 35678999999999974 46789999987332 23578899999999999999999998632 57899999
Q ss_pred cCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCcc
Q 003594 535 MPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNI 614 (808)
Q Consensus 535 ~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~ 614 (808)
+++|+|.+++.. ....++|..++.++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||++.
T Consensus 89 ~~~~~L~~~l~~---------~~~~l~~~~~~~~~~~l~~aL~~LH~---~~i~H~dlkp~nili~~~~~~~l~dfg~~~ 156 (284)
T cd05081 89 LPYGSLRDYLQK---------HRERLDHRKLLLYASQICKGMEYLGS---KRYVHRDLATRNILVESENRVKIGDFGLTK 156 (284)
T ss_pred cCCCCHHHHHHh---------cCcCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCCHhhEEECCCCeEEECCCcccc
Confidence 999999999953 23468999999999999999999999 569999999999999999999999999875
Q ss_pred c----------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHh--h--------hcHHHHH
Q 003594 615 C----------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAM--A--------LDQTTLM 656 (808)
Q Consensus 615 ~----------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~--~--------~~~~~~~ 656 (808)
. ..++.++|||||||++|||++|..|+....... . .....+.
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (284)
T cd05081 157 VLPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAEFMRMMGNDKQGQMIVYHLI 236 (284)
T ss_pred cccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchhhhhhcccccccccchHHHH
Confidence 2 235678999999999999999876654221100 0 0001111
Q ss_pred HHhc-cCCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHH
Q 003594 657 QVLD-GNAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEV 704 (808)
Q Consensus 657 ~~ld-~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l 704 (808)
..+. ......+..++..+.+|+.+||..+ |..|||+.+|++.|+.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~li~~cl~~~--p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 237 ELLKNNGRLPAPPGCPAEIYAIMKECWNND--PSQRPSFSELALQVEAI 283 (284)
T ss_pred HHHhcCCcCCCCCCCCHHHHHHHHHHccCC--hhhCCCHHHHHHHHHhc
Confidence 2222 2233344567889999999999999 99999999999999865
No 128
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=2.3e-32 Score=292.42 Aligned_cols=233 Identities=21% Similarity=0.355 Sum_probs=186.4
Q ss_pred ccccccccccccCCceEEEEEEEC------CeEEEEEEccCCCC---HHHHHHHHHHHhccCCCCccceeecccc---ce
Q 003594 461 EDFSERFRLKCAGDWTNVYRGRLN------HASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE---LK 528 (808)
Q Consensus 461 ~~f~~~~~i~g~G~~g~Vy~~~~~------~~~vAiK~l~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~---~~ 528 (808)
++|.. ..++|+|+||.||+|.+. +..|++|.+..... ...+.+|+.++.+++||||+++++++.. ..
T Consensus 6 ~~~~~-~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~ 84 (280)
T cd05043 6 DRVTL-SDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEPP 84 (280)
T ss_pred hheEE-eeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCC
Confidence 34443 356789999999999983 47899999874332 3568899999999999999999998744 68
Q ss_pred EEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEE
Q 003594 529 CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKIS 608 (808)
Q Consensus 529 ~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~ 608 (808)
+++++|+++|+|.+++....... ......+++..++.++.||+.||.|||+ .+++||||||+|||++.++.+||+
T Consensus 85 ~~~~~~~~~~~L~~~l~~~~~~~--~~~~~~l~~~~~~~i~~~i~~~l~~LH~---~~i~H~di~p~nil~~~~~~~kl~ 159 (280)
T cd05043 85 FVLYPYMNWGNLKLFLQQCRLGE--ANNPQALSTQQLVHMAIQIACGMSYLHK---RGVIHKDIAARNCVIDEELQVKIT 159 (280)
T ss_pred EEEEEcCCCCcHHHHHHhccccc--cccccCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccCHhhEEEcCCCcEEEC
Confidence 99999999999999996542100 0122579999999999999999999999 569999999999999999999999
Q ss_pred eCCCccc---------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhc
Q 003594 609 GLGLNIC---------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLD 660 (808)
Q Consensus 609 DfGla~~---------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld 660 (808)
|||+++. ..++.++||||||+++|++++ |++||..... ......+.+
T Consensus 160 d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-----~~~~~~~~~ 234 (280)
T cd05043 160 DNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP-----FEMAAYLKD 234 (280)
T ss_pred CCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH-----HHHHHHHHc
Confidence 9999852 225678999999999999999 9999865321 111222223
Q ss_pred cCCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHHHH
Q 003594 661 GNAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVRK 706 (808)
Q Consensus 661 ~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~~ 706 (808)
......+..++..+.+++.+||..+ |..||++.+++..|+.+.+
T Consensus 235 ~~~~~~~~~~~~~~~~li~~~l~~~--p~~Rps~~~~~~~l~~~~~ 278 (280)
T cd05043 235 GYRLAQPINCPDELFAVMACCWALD--PEERPSFSQLVQCLTDFHA 278 (280)
T ss_pred CCCCCCCCcCCHHHHHHHHHHcCCC--hhhCCCHHHHHHHHHHHHh
Confidence 3333445567889999999999999 9999999999999998864
No 129
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=2.1e-32 Score=294.53 Aligned_cols=234 Identities=21% Similarity=0.336 Sum_probs=185.2
Q ss_pred hccccccccccccCCceEEEEEEEC-------CeEEEEEEccCCCC---HHHHHHHHHHHhccCCCCccceeecccc--c
Q 003594 460 TEDFSERFRLKCAGDWTNVYRGRLN-------HASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--L 527 (808)
Q Consensus 460 t~~f~~~~~i~g~G~~g~Vy~~~~~-------~~~vAiK~l~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~ 527 (808)
+++|... +.+|+|+||.||+|... +..||+|.+..... ...+.+|+.+++.++||||+++++++.+ .
T Consensus 5 ~~~~~i~-~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 5 REKITLL-RELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred HHHceee-eeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 3444443 56789999999999752 35899999873332 2467889999999999999999999865 7
Q ss_pred eEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEE
Q 003594 528 KCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKI 607 (808)
Q Consensus 528 ~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl 607 (808)
.++||||+++|+|.+++...............+++..+..++.||+.||.|||+ ++|+||||||+|||++.++.+||
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dikp~nili~~~~~~~L 160 (288)
T cd05061 84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNA---KKFVHRDLAARNCMVAHDFTVKI 160 (288)
T ss_pred cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHh---CCCcCCCCChheEEEcCCCcEEE
Confidence 899999999999999997542111111223556888899999999999999999 66999999999999999999999
Q ss_pred EeCCCccc---------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHh
Q 003594 608 SGLGLNIC---------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVL 659 (808)
Q Consensus 608 ~DfGla~~---------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~l 659 (808)
+|||+++. ..++.++|||||||++|||++ |.+||..... ......+.
T Consensus 161 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~-----~~~~~~~~ 235 (288)
T cd05061 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN-----EQVLKFVM 235 (288)
T ss_pred CcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHH
Confidence 99998741 235788999999999999998 7888864321 22333344
Q ss_pred ccCCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHH
Q 003594 660 DGNAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEV 704 (808)
Q Consensus 660 d~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l 704 (808)
++.....+..++..+.+++.+||+.| |..||++.++++.|+..
T Consensus 236 ~~~~~~~~~~~~~~~~~li~~~l~~~--p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 236 DGGYLDQPDNCPERVTDLMRMCWQFN--PKMRPTFLEIVNLLKDD 278 (288)
T ss_pred cCCCCCCCCCCCHHHHHHHHHHcCCC--hhHCcCHHHHHHHHHhh
Confidence 44444556677889999999999999 99999999999888765
No 130
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=2.5e-32 Score=299.34 Aligned_cols=207 Identities=22% Similarity=0.301 Sum_probs=170.3
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccC-----CCCHHHHHHHHHHHhccCCC-Cccceeecccc--ceEEEEeecC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNN-----GLSEEDFQAKVSFLTAVRHP-HLVAVMGCCSE--LKCIVFEYMP 536 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~-----~~~~~~~~~Ei~il~~l~Hp-nIv~l~g~~~~--~~~lV~Ey~~ 536 (808)
.+.+|.|+||.||+|.. +++.||||++.. ......+..|+.++..+.|+ +|+++++++.+ ..|+||||++
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~ 84 (324)
T cd05587 5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 84 (324)
T ss_pred EEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEEcCCC
Confidence 45678999999999998 467899999872 22345688899999999765 57888888754 7899999999
Q ss_pred CCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-
Q 003594 537 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC- 615 (808)
Q Consensus 537 ~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~- 615 (808)
+|+|.+++. ....+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||++..
T Consensus 85 ~g~L~~~~~----------~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~ 151 (324)
T cd05587 85 GGDLMYHIQ----------QVGKFKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDAEGHIKIADFGMCKEN 151 (324)
T ss_pred CCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEEcCCCCEEEeecCcceec
Confidence 999999994 34568999999999999999999999 6699999999999999999999999998742
Q ss_pred ------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhH
Q 003594 616 ------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLA 671 (808)
Q Consensus 616 ------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~ 671 (808)
..++.++|||||||++|+|+||++||..... ...+..+. .....+|...+
T Consensus 152 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~-----~~~~~~i~-~~~~~~~~~~~ 225 (324)
T cd05587 152 IFGGKTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE-----DELFQSIM-EHNVSYPKSLS 225 (324)
T ss_pred CCCCCceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH-----HHHHHHHH-cCCCCCCCCCC
Confidence 2357889999999999999999999965321 12222222 33445677788
Q ss_pred HHHHHHHHHhhccCCCcCccccH
Q 003594 672 EELAGIALKCLSADQDANRDLRI 694 (808)
Q Consensus 672 ~~l~~Li~~Cl~~dp~p~~Rps~ 694 (808)
..+.+++.+||..| |..|++.
T Consensus 226 ~~~~~li~~~l~~~--P~~R~~~ 246 (324)
T cd05587 226 KEAVSICKGLLTKH--PAKRLGC 246 (324)
T ss_pred HHHHHHHHHHhhcC--HHHcCCC
Confidence 99999999999999 9999985
No 131
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.3e-32 Score=296.41 Aligned_cols=218 Identities=19% Similarity=0.264 Sum_probs=169.7
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccC---CCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNN---GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGN 539 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~---~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gs 539 (808)
.+.+|.|+||.||+|.. ++..||+|++.. ......+.+|+.++++++||||+++++++.+ ..++||||++ |+
T Consensus 10 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-~~ 88 (288)
T cd07871 10 LDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEYLD-SD 88 (288)
T ss_pred eeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeCCC-cC
Confidence 35678999999999998 578999999872 2234578899999999999999999999865 6789999997 59
Q ss_pred HHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc----
Q 003594 540 LRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC---- 615 (808)
Q Consensus 540 L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~---- 615 (808)
|.+++.. ....+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 89 l~~~l~~---------~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~ 156 (288)
T cd07871 89 LKQYLDN---------CGNLMSMHNVKIFMFQLLRGLSYCHK---RKILHRDLKPQNLLINEKGELKLADFGLARAKSVP 156 (288)
T ss_pred HHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEECcCcceeeccCC
Confidence 9998842 23457899999999999999999999 6699999999999999999999999998742
Q ss_pred ----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhh----------cHHHHHH------
Q 003594 616 ----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMAL----------DQTTLMQ------ 657 (808)
Q Consensus 616 ----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~----------~~~~~~~------ 657 (808)
..++.++|||||||++|+|+||++||......... ....+..
T Consensus 157 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (288)
T cd07871 157 TKTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNEE 236 (288)
T ss_pred CccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccchh
Confidence 23577899999999999999999998542110000 0000000
Q ss_pred ---HhccCC-----CCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 658 ---VLDGNA-----GIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 658 ---~ld~~~-----~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
...+.. .......+.++.+|+.+||..| |..|||+.++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~d--p~~R~t~~~~l~ 284 (288)
T cd07871 237 FRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYE--TKSRISAEAALR 284 (288)
T ss_pred hhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcC--cccCCCHHHHhc
Confidence 000000 0011235678899999999999 999999999874
No 132
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=7.6e-33 Score=304.29 Aligned_cols=216 Identities=20% Similarity=0.259 Sum_probs=173.5
Q ss_pred ccccccCCceEEEEEEE-----CCeEEEEEEccC------CCCHHHHHHHHHHHhcc-CCCCccceeecccc--ceEEEE
Q 003594 467 FRLKCAGDWTNVYRGRL-----NHASVAIKTLNN------GLSEEDFQAKVSFLTAV-RHPHLVAVMGCCSE--LKCIVF 532 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~-----~~~~vAiK~l~~------~~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~~~lV~ 532 (808)
.+.+|.|+||.||++.. ++..||+|++.. ....+.+..|+.++..+ +||||+++++++.+ ..++||
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (332)
T cd05614 5 LKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKLHLIL 84 (332)
T ss_pred EEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEEEEEE
Confidence 35678999999999886 468999999862 12235688899999999 59999999998865 678999
Q ss_pred eecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCC
Q 003594 533 EYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 612 (808)
Q Consensus 533 Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGl 612 (808)
||+++|+|.+++. ....+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 85 e~~~~g~L~~~l~----------~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivHrDlkp~Nili~~~~~~kl~DfG~ 151 (332)
T cd05614 85 DYVSGGEMFTHLY----------QRDNFSEDEVRFYSGEIILALEHLHK---LGIVYRDIKLENILLDSEGHVVLTDFGL 151 (332)
T ss_pred eCCCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHH---CCcEecCCCHHHeEECCCCCEEEeeCcC
Confidence 9999999999994 34568999999999999999999999 5699999999999999999999999998
Q ss_pred ccc---------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCC
Q 003594 613 NIC---------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGI 665 (808)
Q Consensus 613 a~~---------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~ 665 (808)
++. ..++.++|||||||++|+|+||+.||...... .....+...+......
T Consensus 152 ~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~--~~~~~~~~~~~~~~~~ 229 (332)
T cd05614 152 SKEFLSEEKERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGER--NTQSEVSRRILKCDPP 229 (332)
T ss_pred CccccccCCCccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCC--CCHHHHHHHHhcCCCC
Confidence 742 12567899999999999999999999642211 1112222222233445
Q ss_pred CChhhHHHHHHHHHHhhccCCCcCccc-----cHHhhHH
Q 003594 666 WPLDLAEELAGIALKCLSADQDANRDL-----RIAGVMK 699 (808)
Q Consensus 666 ~p~~~~~~l~~Li~~Cl~~dp~p~~Rp-----s~~evl~ 699 (808)
+|..++..+.+++.+||+.| |..|| ++.++++
T Consensus 230 ~~~~~~~~~~~li~~~l~~d--p~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 230 FPSFIGPEAQDLLHKLLRKD--PKKRLGAGPQGASEIKE 266 (332)
T ss_pred CCCCCCHHHHHHHHHHcCCC--HHHcCCCCCCCHHHHHc
Confidence 66678899999999999999 99999 5555553
No 133
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=3e-32 Score=288.63 Aligned_cols=229 Identities=20% Similarity=0.311 Sum_probs=183.7
Q ss_pred cccccccccccCCceEEEEEEE--CCeEEEEEEccC-----CCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEE
Q 003594 462 DFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN-----GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVF 532 (808)
Q Consensus 462 ~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~-----~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~ 532 (808)
+|... +.+|.|+||.||+|.. +|..||+|.++. ....+.+.+|+.++++++|+||+++++++.+ ..++||
T Consensus 3 ~y~~~-~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 3 NFKIE-KKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred ceeee-eeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 44433 4567899999999998 589999998862 1224678999999999999999999999865 689999
Q ss_pred eecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCC
Q 003594 533 EYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 612 (808)
Q Consensus 533 Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGl 612 (808)
||+++|+|.+++.... .....+++..++.++.+++.||.|||+ .+|+||||+|+||+++.++.++|+|||+
T Consensus 82 e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~nil~~~~~~~~l~d~~~ 152 (267)
T cd08224 82 ELADAGDLSRMIKHFK------KQKRLIPERTIWKYFVQLCSALEHMHS---KRIMHRDIKPANVFITATGVVKLGDLGL 152 (267)
T ss_pred ecCCCCCHHHHHHHhc------ccCCCcCHHHHHHHHHHHHHHHHHHHh---CCEecCCcChhhEEECCCCcEEEeccce
Confidence 9999999999986431 234568999999999999999999999 5699999999999999999999999998
Q ss_pred ccc-------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCC
Q 003594 613 NIC-------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWP 667 (808)
Q Consensus 613 a~~-------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p 667 (808)
+.. ..++.++|||||||++|+|++|+.||..... ........+........|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~ 229 (267)
T cd08224 153 GRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM---NLYSLCKKIEKCDYPPLP 229 (267)
T ss_pred eeeccCCCcccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCCc---cHHHHHhhhhcCCCCCCC
Confidence 642 2356789999999999999999999853211 001111222222233344
Q ss_pred h-hhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHHH
Q 003594 668 L-DLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVR 705 (808)
Q Consensus 668 ~-~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~ 705 (808)
. ..+..+.+++.+||..+ |..||++.+|++.|+.+.
T Consensus 230 ~~~~~~~~~~~i~~cl~~~--p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 230 ADHYSEELRDLVSRCINPD--PEKRPDISYVLQVAKEMH 266 (267)
T ss_pred hhhcCHHHHHHHHHHcCCC--cccCCCHHHHHHHHHHhc
Confidence 3 67789999999999999 999999999999998874
No 134
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=2.2e-32 Score=291.06 Aligned_cols=220 Identities=24% Similarity=0.385 Sum_probs=182.4
Q ss_pred cccccCCceEEEEEEECC-----eEEEEEEccCCC---CHHHHHHHHHHHhccCCCCccceeecccc-ceEEEEeecCCC
Q 003594 468 RLKCAGDWTNVYRGRLNH-----ASVAIKTLNNGL---SEEDFQAKVSFLTAVRHPHLVAVMGCCSE-LKCIVFEYMPNG 538 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~~~-----~~vAiK~l~~~~---~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-~~~lV~Ey~~~g 538 (808)
+.+|.|+||.||+|.+.+ ..||||...... ..+.|.+|+.++++++||||++++++|.+ ..++||||+++|
T Consensus 12 ~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~lv~e~~~~~ 91 (270)
T cd05056 12 RCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITENPVWIVMELAPLG 91 (270)
T ss_pred eeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcCCCcEEEEEcCCCC
Confidence 556889999999998732 479999987433 23578999999999999999999999866 678999999999
Q ss_pred CHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc---
Q 003594 539 NLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC--- 615 (808)
Q Consensus 539 sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~--- 615 (808)
+|.+++... ...+++..++.++.|++.||.|||+ .+++||||||+|||++.++.+||+|||++..
T Consensus 92 ~L~~~l~~~---------~~~~~~~~~~~~~~~l~~~l~~lH~---~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 159 (270)
T cd05056 92 ELRSYLQVN---------KYSLDLASLILYSYQLSTALAYLES---KRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLED 159 (270)
T ss_pred cHHHHHHhC---------CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccccChheEEEecCCCeEEccCceeeeccc
Confidence 999999532 3458999999999999999999999 5699999999999999999999999998742
Q ss_pred -----------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhH
Q 003594 616 -----------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLA 671 (808)
Q Consensus 616 -----------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~ 671 (808)
..++.++||||||+++|+|++ |.+||..... ......+........|..++
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~-----~~~~~~~~~~~~~~~~~~~~ 234 (270)
T cd05056 160 ESYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKN-----NDVIGRIENGERLPMPPNCP 234 (270)
T ss_pred ccceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCH-----HHHHHHHHcCCcCCCCCCCC
Confidence 235678999999999999996 9999865321 12222333333344566788
Q ss_pred HHHHHHHHHhhccCCCcCccccHHhhHHHHHHHHH
Q 003594 672 EELAGIALKCLSADQDANRDLRIAGVMKELDEVRK 706 (808)
Q Consensus 672 ~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~~ 706 (808)
..+.+++.+||..+ |..||++.+++..|+.++.
T Consensus 235 ~~~~~li~~~l~~~--P~~Rpt~~~~~~~l~~~~~ 267 (270)
T cd05056 235 PTLYSLMTKCWAYD--PSKRPRFTELKAQLSDILQ 267 (270)
T ss_pred HHHHHHHHHHcCCC--hhhCcCHHHHHHHHHHHHh
Confidence 89999999999999 9999999999999998865
No 135
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=3.3e-33 Score=305.14 Aligned_cols=218 Identities=18% Similarity=0.274 Sum_probs=188.4
Q ss_pred ccccccccCCceEEEEEEE--CCeEEEEEEcc-C---CCCHHHHHHHHHHHhccCCCCccceeecccc--c-eEEEEeec
Q 003594 465 ERFRLKCAGDWTNVYRGRL--NHASVAIKTLN-N---GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--L-KCIVFEYM 535 (808)
Q Consensus 465 ~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~-~---~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~-~~lV~Ey~ 535 (808)
+..+.+|+|+||.++..+. ++..|++|.+. . ........+|+.++++++|||||.+++.|.+ . .+|||+||
T Consensus 7 e~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm~Y~ 86 (426)
T KOG0589|consen 7 EVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVMEYC 86 (426)
T ss_pred hhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEEeec
Confidence 3456789999999998877 56899999998 2 2223467899999999999999999999966 3 79999999
Q ss_pred CCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc
Q 003594 536 PNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC 615 (808)
Q Consensus 536 ~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~ 615 (808)
+||+|.+.|.+. +...+++..++.++.|++.|+.|||+ ..|+|||||+.|||++.++.+||+|||+|+.
T Consensus 87 eGg~l~~~i~~~--------k~~~f~E~~i~~~~~Q~~~av~ylH~---~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~ 155 (426)
T KOG0589|consen 87 EGGDLAQLIKEQ--------KGVLFPEERILKWFVQILLAVNYLHE---NRVLHRDLKCANIFLTKDKKVKLGDFGLAKI 155 (426)
T ss_pred CCCCHHHHHHHH--------hhccccHHHHHHHHHHHHHHHHHHHh---hhhhcccchhhhhhccccCceeecchhhhhh
Confidence 999999999764 35678999999999999999999998 5699999999999999999999999999975
Q ss_pred -------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhh
Q 003594 616 -------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDL 670 (808)
Q Consensus 616 -------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~ 670 (808)
..|+.|+|||||||++|||++-+++|...+. ......+......+.|..+
T Consensus 156 l~~~~~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m-----~~Li~ki~~~~~~Plp~~y 230 (426)
T KOG0589|consen 156 LNPEDSLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNM-----SELILKINRGLYSPLPSMY 230 (426)
T ss_pred cCCchhhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccch-----HHHHHHHhhccCCCCCccc
Confidence 3589999999999999999999999976422 2334455555667788899
Q ss_pred HHHHHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 671 AEELAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 671 ~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
+.++..||..||..+ |+.||++.+++..
T Consensus 231 s~el~~lv~~~l~~~--P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 231 SSELRSLVKSMLRKN--PEHRPSALELLRR 258 (426)
T ss_pred cHHHHHHHHHHhhcC--CccCCCHHHHhhC
Confidence 999999999999999 9999999999986
No 136
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=2.5e-32 Score=287.36 Aligned_cols=223 Identities=28% Similarity=0.462 Sum_probs=184.1
Q ss_pred ccccCCceEEEEEEEC-----CeEEEEEEccCCCC---HHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCC
Q 003594 469 LKCAGDWTNVYRGRLN-----HASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNG 538 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~~-----~~~vAiK~l~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~g 538 (808)
.+|.|+||.||+|.+. +..|++|.+..... ...+.+|+.++..++||||+++++++.+ ..++||||+++|
T Consensus 2 ~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (262)
T cd00192 2 KLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEGG 81 (262)
T ss_pred ccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccCC
Confidence 5688999999999984 78999999984332 5788999999999999999999999866 789999999999
Q ss_pred CHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc---
Q 003594 539 NLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC--- 615 (808)
Q Consensus 539 sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~--- 615 (808)
+|.+++....... .......+++..++.++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||.+..
T Consensus 82 ~L~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~al~~lH~---~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 82 DLLDYLRKSRPVF-PSPEKSTLSLKDLLSFAIQIAKGMEYLAS---KKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred cHHHHHhhccccc-cccccccCCHHHHHHHHHHHHHHHHHHHc---CCcccCccCcceEEECCCCcEEEccccccccccc
Confidence 9999996431000 00013679999999999999999999999 6699999999999999999999999998753
Q ss_pred ------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCCCCCChhh
Q 003594 616 ------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDL 670 (808)
Q Consensus 616 ------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~ 670 (808)
..++.++||||||+++|+|++ |.+||..... ......+..+.....|..+
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~ 232 (262)
T cd00192 158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN-----EEVLEYLRKGYRLPKPEYC 232 (262)
T ss_pred ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH-----HHHHHHHHcCCCCCCCccC
Confidence 235678999999999999999 6999875421 2233344445555667778
Q ss_pred HHHHHHHHHHhhccCCCcCccccHHhhHHHHH
Q 003594 671 AEELAGIALKCLSADQDANRDLRIAGVMKELD 702 (808)
Q Consensus 671 ~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~ 702 (808)
+..+.+++.+||..+ |..||++.+++..|+
T Consensus 233 ~~~~~~li~~~l~~~--p~~Rps~~~l~~~l~ 262 (262)
T cd00192 233 PDELYELMLSCWQLD--PEDRPTFSELVERLE 262 (262)
T ss_pred ChHHHHHHHHHccCC--cccCcCHHHHHHhhC
Confidence 899999999999999 999999999998773
No 137
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=2e-32 Score=290.43 Aligned_cols=224 Identities=20% Similarity=0.298 Sum_probs=180.0
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccC--C---CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNN--G---LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPN 537 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~--~---~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~ 537 (808)
.+.+|.|+||.||+|.. ++..||||.+.. . .....+.+|+.+++.++||||+++++++.+ ..++||||+++
T Consensus 7 ~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~ 86 (267)
T cd08228 7 EKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVLELADA 86 (267)
T ss_pred eeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEEEecCC
Confidence 35568999999999998 689999998762 1 113468899999999999999999999854 78999999999
Q ss_pred CCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--
Q 003594 538 GNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-- 615 (808)
Q Consensus 538 gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-- 615 (808)
|+|.+++.... .....+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.++|+|||++..
T Consensus 87 ~~L~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~ 157 (267)
T cd08228 87 GDLSQMIKYFK------KQKRLIPERTVWKYFVQLCSAVEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFS 157 (267)
T ss_pred CcHHHHHHHhh------hccCCCCHHHHHHHHHHHHHHHHHHhh---CCeeCCCCCHHHEEEcCCCCEEECccccceecc
Confidence 99999985431 234568999999999999999999999 5699999999999999999999999998642
Q ss_pred -----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhc-cCCCCC-Chhh
Q 003594 616 -----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLD-GNAGIW-PLDL 670 (808)
Q Consensus 616 -----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld-~~~~~~-p~~~ 670 (808)
..++.++||||||+++|+|++|+.||..... ....+...+. ...+.. +...
T Consensus 158 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 233 (267)
T cd08228 158 SKTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM----NLFSLCQKIEQCDYPPLPTEHY 233 (267)
T ss_pred chhHHHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccc----cHHHHHHHHhcCCCCCCChhhc
Confidence 2356789999999999999999999853211 1111112222 122222 2356
Q ss_pred HHHHHHHHHHhhccCCCcCccccHHhhHHHHHHHH
Q 003594 671 AEELAGIALKCLSADQDANRDLRIAGVMKELDEVR 705 (808)
Q Consensus 671 ~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~ 705 (808)
+..+.+++.+||..+ |..||++.+|++.|+.++
T Consensus 234 ~~~~~~li~~cl~~~--p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 234 SEKLRELVSMCIYPD--PDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred CHHHHHHHHHHCCCC--cccCcCHHHHHHHHHHhc
Confidence 788999999999999 999999999999998874
No 138
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=1.8e-32 Score=291.64 Aligned_cols=218 Identities=22% Similarity=0.308 Sum_probs=171.4
Q ss_pred ccccCCceEEEEEEEC----CeEEEEEEccCCCC---HHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCC
Q 003594 469 LKCAGDWTNVYRGRLN----HASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGN 539 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~~----~~~vAiK~l~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gs 539 (808)
.+|+|+||.||+|.+. +..+|+|.+..... ...|.+|+.++++++||||++++|+|.+ ..++||||+++|+
T Consensus 2 ~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05087 2 EIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLGD 81 (269)
T ss_pred cccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCCc
Confidence 4689999999999863 35799999874332 3478899999999999999999999866 6789999999999
Q ss_pred HHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc----
Q 003594 540 LRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC---- 615 (808)
Q Consensus 540 L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~---- 615 (808)
|.+++..... .....+++..+..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||++..
T Consensus 82 L~~~l~~~~~-----~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~ 153 (269)
T cd05087 82 LKGYLRSCRK-----AELMTPDPTTLQRMACEIALGLLHLHK---NNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKE 153 (269)
T ss_pred HHHHHHHhhh-----cccccccHHHHHHHHHHHHHHHHHHHH---CCEeccccCcceEEEcCCCcEEECCccccccccCc
Confidence 9999965321 123456788889999999999999999 6699999999999999999999999998742
Q ss_pred ------------------C------------CCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhcc---
Q 003594 616 ------------------D------------QLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDG--- 661 (808)
Q Consensus 616 ------------------~------------~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~--- 661 (808)
+ .++.++||||||+++|||++ |++||...... .........
T Consensus 154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~-----~~~~~~~~~~~~ 228 (269)
T cd05087 154 DYYVTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDE-----QVLTYTVREQQL 228 (269)
T ss_pred ceeecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChH-----HHHHHHhhcccC
Confidence 0 13678999999999999996 99998643221 111111111
Q ss_pred --CCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHH
Q 003594 662 --NAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELD 702 (808)
Q Consensus 662 --~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~ 702 (808)
..+......+..+.+++.+|| .+ |.+||++.+|+..|.
T Consensus 229 ~~~~~~~~~~~~~~~~~l~~~c~-~~--P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 229 KLPKPRLKLPLSDRWYEVMQFCW-LQ--PEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCCCccCCCCChHHHHHHHHHh-cC--cccCCCHHHHHHHhc
Confidence 112223346778999999998 57 899999999998774
No 139
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.1e-32 Score=318.74 Aligned_cols=228 Identities=20% Similarity=0.284 Sum_probs=185.4
Q ss_pred HHHhhccccccccccccCCceEEEEEEE--CCeEEEEEEccCC-CC---HHHHHHHHHHHhccCCCCccceeecccc---
Q 003594 456 IRLATEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNG-LS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--- 526 (808)
Q Consensus 456 i~~at~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~--- 526 (808)
+....++|... +++|.|+||.||+|.. +|+.||||++... .. ...+.+|+.++..++|+||+++++.+..
T Consensus 27 ~~~~~~rY~i~-~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~ 105 (496)
T PTZ00283 27 AKEQAKKYWIS-RVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDP 105 (496)
T ss_pred ccccCCCEEEE-EEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccc
Confidence 33444566544 5678999999999987 6899999998732 22 3467889999999999999999877632
Q ss_pred -------ceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCccc
Q 003594 527 -------LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILL 599 (808)
Q Consensus 527 -------~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILl 599 (808)
..++||||+++|+|.++|.... .....+++..+..|+.|++.||.|||+ .+|+||||||+|||+
T Consensus 106 ~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~------~~~~~l~e~~~~~i~~qll~aL~~lH~---~~IiHrDLKP~NILl 176 (496)
T PTZ00283 106 RNPENVLMIALVLDYANAGDLRQEIKSRA------KTNRTFREHEAGLLFIQVLLAVHHVHS---KHMIHRDIKSANILL 176 (496)
T ss_pred cCcccceEEEEEEeCCCCCcHHHHHHHhh------ccCCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEE
Confidence 2579999999999999996532 234578999999999999999999999 669999999999999
Q ss_pred CCCccEEEEeCCCccc---------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcH
Q 003594 600 DRNLVAKISGLGLNIC---------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQ 652 (808)
Q Consensus 600 d~~~~~kl~DfGla~~---------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~ 652 (808)
+.++.+||+|||+++. ..++.++|||||||+||||++|++||.... ..
T Consensus 177 ~~~~~vkL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~-----~~ 251 (496)
T PTZ00283 177 CSNGLVKLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGEN-----ME 251 (496)
T ss_pred eCCCCEEEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC-----HH
Confidence 9999999999998742 236789999999999999999999996432 12
Q ss_pred HHHHHHhccCCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 653 TTLMQVLDGNAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 653 ~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
..+..++.......|..++.++.+|+.+||..| |..||++.+++..
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~d--P~~RPs~~ell~~ 297 (496)
T PTZ00283 252 EVMHKTLAGRYDPLPPSISPEMQEIVTALLSSD--PKRRPSSSKLLNM 297 (496)
T ss_pred HHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccC--hhhCcCHHHHHhC
Confidence 233444444455567788899999999999999 9999999999863
No 140
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=2.4e-32 Score=287.54 Aligned_cols=214 Identities=21% Similarity=0.288 Sum_probs=179.2
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccC----CCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCC
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNN----GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGN 539 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~----~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gs 539 (808)
+.+|.|+||.||+|.+ ++..|++|.+.. ......+.+|+.+++.++||||+++++++.+ ..++||||+++++
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 85 (256)
T cd08529 6 NKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEYAENGD 85 (256)
T ss_pred EEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEeCCCCc
Confidence 4567899999999998 679999999862 2234678899999999999999999999865 6899999999999
Q ss_pred HHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc----
Q 003594 540 LRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC---- 615 (808)
Q Consensus 540 L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~---- 615 (808)
|.+++... ....+++..++.++.|++.||.|||+ .+|+||||||+||+++.++.++|+|||+++.
T Consensus 86 L~~~l~~~--------~~~~~~~~~~~~i~~~l~~al~~lH~---~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~ 154 (256)
T cd08529 86 LHKLLKMQ--------RGRPLPEDQVWRFFIQILLGLAHLHS---KKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDN 154 (256)
T ss_pred HHHHHHHh--------cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEEeCCCCEEEcccccceeccCc
Confidence 99999643 24578999999999999999999999 6699999999999999999999999998653
Q ss_pred ---------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHHH
Q 003594 616 ---------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEEL 674 (808)
Q Consensus 616 ---------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l 674 (808)
..++.++||||||+++|+|++|+.||..... ......+........+..++..+
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 229 (256)
T cd08529 155 TNFANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQ-----GALILKIIRGVFPPVSQMYSQQL 229 (256)
T ss_pred cchhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHcCCCCCCccccCHHH
Confidence 2346789999999999999999999975321 12233334444444555678899
Q ss_pred HHHHHHhhccCCCcCccccHHhhHH
Q 003594 675 AGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 675 ~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
.+++.+||+.+ |..||++.++++
T Consensus 230 ~~~i~~~l~~~--p~~Rp~~~~ll~ 252 (256)
T cd08529 230 AQLIDQCLTKD--YRQRPDTFQLLR 252 (256)
T ss_pred HHHHHHHccCC--cccCcCHHHHhh
Confidence 99999999999 999999999875
No 141
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=2.5e-32 Score=307.55 Aligned_cols=229 Identities=21% Similarity=0.349 Sum_probs=182.4
Q ss_pred ccccccCCceEEEEEEEC-------CeEEEEEEccCCCC---HHHHHHHHHHHhccC-CCCccceeecccc--ceEEEEe
Q 003594 467 FRLKCAGDWTNVYRGRLN-------HASVAIKTLNNGLS---EEDFQAKVSFLTAVR-HPHLVAVMGCCSE--LKCIVFE 533 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~~-------~~~vAiK~l~~~~~---~~~~~~Ei~il~~l~-HpnIv~l~g~~~~--~~~lV~E 533 (808)
.+.+|+|+||.||+|.+. +..||||+++.... .+.+.+|+.+|.++. |||||+++|+|.. ..++|||
T Consensus 42 ~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~~~~iv~E 121 (401)
T cd05107 42 GRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGGPIYIITE 121 (401)
T ss_pred hhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCCCcEEEEe
Confidence 356789999999999963 25799999984322 346889999999997 9999999999965 6899999
Q ss_pred ecCCCCHHHHHhhcccccc-------------------------------------------------------------
Q 003594 534 YMPNGNLRDKLFTSQRNYK------------------------------------------------------------- 552 (808)
Q Consensus 534 y~~~gsL~~~l~~~~~~~~------------------------------------------------------------- 552 (808)
|+++|+|.++++.......
T Consensus 122 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (401)
T cd05107 122 YCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGTVKY 201 (401)
T ss_pred ccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcchhhhhh
Confidence 9999999999975421000
Q ss_pred ---------------------------ccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccE
Q 003594 553 ---------------------------NCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVA 605 (808)
Q Consensus 553 ---------------------------~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~ 605 (808)
.......++|...+.|+.||+.||.|||+ .+|+||||||+|||++.++.+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrdlkp~NiLl~~~~~~ 278 (401)
T cd05107 202 ADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLAS---KNCVHRDLAARNVLICEGKLV 278 (401)
T ss_pred hhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhc---CCcCcccCCcceEEEeCCCEE
Confidence 00122457899999999999999999999 669999999999999999999
Q ss_pred EEEeCCCccc---------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHH
Q 003594 606 KISGLGLNIC---------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQ 657 (808)
Q Consensus 606 kl~DfGla~~---------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~ 657 (808)
||+|||+++. ..++.++|||||||++|||++ |..||..... ......
T Consensus 279 kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~-----~~~~~~ 353 (401)
T cd05107 279 KICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPM-----NEQFYN 353 (401)
T ss_pred EEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCc-----hHHHHH
Confidence 9999999752 124678999999999999998 8888864321 111222
Q ss_pred -HhccCCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHHH
Q 003594 658 -VLDGNAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVR 705 (808)
Q Consensus 658 -~ld~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~ 705 (808)
+..+.....|..++..+.+|+.+||..+ |..||++.+|+..|+.+.
T Consensus 354 ~~~~~~~~~~p~~~~~~l~~li~~cl~~~--P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 354 AIKRGYRMAKPAHASDEIYEIMQKCWEEK--FEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred HHHcCCCCCCCCCCCHHHHHHHHHHcCCC--hhHCcCHHHHHHHHHHHh
Confidence 2223344456677899999999999999 999999999999998763
No 142
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=2.2e-32 Score=293.55 Aligned_cols=229 Identities=22% Similarity=0.392 Sum_probs=181.5
Q ss_pred cccccccccccCCceEEEEEEE------CCeEEEEEEccCCC---CHHHHHHHHHHHhccCCCCccceeecccc----ce
Q 003594 462 DFSERFRLKCAGDWTNVYRGRL------NHASVAIKTLNNGL---SEEDFQAKVSFLTAVRHPHLVAVMGCCSE----LK 528 (808)
Q Consensus 462 ~f~~~~~i~g~G~~g~Vy~~~~------~~~~vAiK~l~~~~---~~~~~~~Ei~il~~l~HpnIv~l~g~~~~----~~ 528 (808)
.|....+.+|+|+||.||++.+ ++..||+|.+.... ....+.+|+.+++.++||||+++++++.+ ..
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05079 4 RFLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGI 83 (284)
T ss_pred hhhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCce
Confidence 3555667789999999999975 46789999987332 23578999999999999999999999854 57
Q ss_pred EEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEE
Q 003594 529 CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKIS 608 (808)
Q Consensus 529 ~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~ 608 (808)
++||||++|++|.+++.. ....++|..++.++.||+.||.|||+ .+|+||||||+|||++.++.+||+
T Consensus 84 ~lv~e~~~g~~L~~~l~~---------~~~~~~~~~~~~i~~~i~~aL~~lH~---~gi~H~dlkp~Nil~~~~~~~~l~ 151 (284)
T cd05079 84 KLIMEFLPSGSLKEYLPR---------NKNKINLKQQLKYAVQICKGMDYLGS---RQYVHRDLAARNVLVESEHQVKIG 151 (284)
T ss_pred EEEEEccCCCCHHHHHHh---------ccCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecccchheEEEcCCCCEEEC
Confidence 899999999999999942 23468999999999999999999999 669999999999999999999999
Q ss_pred eCCCccc----------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHh---------hhc
Q 003594 609 GLGLNIC----------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAM---------ALD 651 (808)
Q Consensus 609 DfGla~~----------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~---------~~~ 651 (808)
|||++.. ..++.++||||||+++|+|+|++.|+....... ...
T Consensus 152 dfg~~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~ 231 (284)
T cd05079 152 DFGLTKAIETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMT 231 (284)
T ss_pred CCccccccccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhccccccccc
Confidence 9998742 235678999999999999999876643211000 000
Q ss_pred -HHHHHHHhccCCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHH
Q 003594 652 -QTTLMQVLDGNAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEV 704 (808)
Q Consensus 652 -~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l 704 (808)
......+..+...+.+..++..+.+|+.+||+.+ |..||++.++++.|+.+
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~--p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 232 VTRLVRVLEEGKRLPRPPNCPEEVYQLMRKCWEFQ--PSKRTTFQNLIEGFEAI 283 (284)
T ss_pred HHHHHHHHHcCccCCCCCCCCHHHHHHHHHHccCC--cccCcCHHHHHHHHHhh
Confidence 0111112222233345567889999999999999 99999999999999865
No 143
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=8e-33 Score=303.39 Aligned_cols=212 Identities=22% Similarity=0.244 Sum_probs=170.9
Q ss_pred ccccCCceEEEEEEE--CCeEEEEEEccCC-----CCHHHHHHHHH-HHhccCCCCccceeecccc--ceEEEEeecCCC
Q 003594 469 LKCAGDWTNVYRGRL--NHASVAIKTLNNG-----LSEEDFQAKVS-FLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNG 538 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-----~~~~~~~~Ei~-il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~g 538 (808)
++|.|+||.||++.. +|..||||++... .....+..|.. +++.++||||+++++++.. ..|+||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 81 (325)
T cd05604 2 VIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNGG 81 (325)
T ss_pred ceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCCC
Confidence 578999999999998 6899999998722 22345566655 4677999999999998855 789999999999
Q ss_pred CHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc---
Q 003594 539 NLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC--- 615 (808)
Q Consensus 539 sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~--- 615 (808)
+|..++. ....+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 82 ~L~~~l~----------~~~~~~~~~~~~~~~qi~~al~~lH~---~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~ 148 (325)
T cd05604 82 ELFFHLQ----------RERSFPEPRARFYAAEIASALGYLHS---INIVYRDLKPENILLDSQGHVVLTDFGLCKEGIA 148 (325)
T ss_pred CHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEEeecCCcccCCC
Confidence 9999883 44578999999999999999999999 6699999999999999999999999998752
Q ss_pred ----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHH
Q 003594 616 ----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEE 673 (808)
Q Consensus 616 ----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~ 673 (808)
..++.++|||||||++|+|++|.+||..... ...+..++.. ....+...+..
T Consensus 149 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~-----~~~~~~~~~~-~~~~~~~~~~~ 222 (325)
T cd05604 149 QSDTTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDV-----AEMYDNILHK-PLVLRPGASLT 222 (325)
T ss_pred CCCCcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCH-----HHHHHHHHcC-CccCCCCCCHH
Confidence 2357899999999999999999999965321 1222333332 22344467889
Q ss_pred HHHHHHHhhccCCCcCccccHHhhHHHH
Q 003594 674 LAGIALKCLSADQDANRDLRIAGVMKEL 701 (808)
Q Consensus 674 l~~Li~~Cl~~dp~p~~Rps~~evl~~L 701 (808)
+.+++.+||..+ |..||++.+.+..+
T Consensus 223 ~~~ll~~ll~~~--p~~R~~~~~~~~~i 248 (325)
T cd05604 223 AWSILEELLEKD--RQRRLGAKEDFLEI 248 (325)
T ss_pred HHHHHHHHhccC--HHhcCCCCCCHHHH
Confidence 999999999999 99999976544443
No 144
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=1.6e-32 Score=291.81 Aligned_cols=227 Identities=20% Similarity=0.310 Sum_probs=182.2
Q ss_pred HHHHhhccccccccccccCCceEEEEEEE--CCeEEEEEEccCCC--CHHHHHHHHHHHhccCCCCccceeecccc--ce
Q 003594 455 DIRLATEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNGL--SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LK 528 (808)
Q Consensus 455 ei~~at~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~--~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~ 528 (808)
|++.++++|.... ++|+|+||.||+|.+ ++..||+|.+.... ..+.+.+|+.+++.++||||+++++++.. ..
T Consensus 2 ~~~~~~~~~~~~~-~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~ 80 (268)
T cd06624 2 EYEYEYDENGERV-VLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFF 80 (268)
T ss_pred CcccccccCCceE-EEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEE
Confidence 4566788887774 567899999999997 46789999987432 34578999999999999999999999865 78
Q ss_pred EEEEeecCCCCHHHHHhhccccccccccCCCC--CHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCC-CccE
Q 003594 529 CIVFEYMPNGNLRDKLFTSQRNYKNCSRARAL--RWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDR-NLVA 605 (808)
Q Consensus 529 ~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l--~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~-~~~~ 605 (808)
++||||+++++|.+++... ...+ ++..+..++.||+.||.|||+ .+|+||||||+||+++. ++.+
T Consensus 81 ~lv~e~~~~~~L~~~l~~~---------~~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~h~dl~p~nil~~~~~~~~ 148 (268)
T cd06624 81 KIFMEQVPGGSLSALLRSK---------WGPLKDNEQTIIFYTKQILEGLKYLHD---NQIVHRDIKGDNVLVNTYSGVV 148 (268)
T ss_pred EEEEecCCCCCHHHHHHHh---------cccCCCcHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCeE
Confidence 9999999999999999632 2334 888899999999999999999 66999999999999976 6799
Q ss_pred EEEeCCCccc---------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHH
Q 003594 606 KISGLGLNIC---------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQV 658 (808)
Q Consensus 606 kl~DfGla~~---------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ 658 (808)
+|+|||++.. ..++.++||||||+++|+|++|++||...... ........
T Consensus 149 ~l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~---~~~~~~~~ 225 (268)
T cd06624 149 KISDFGTSKRLAGINPCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEP---QAAMFKVG 225 (268)
T ss_pred EEecchhheecccCCCccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccCh---hhhHhhhh
Confidence 9999998632 12567899999999999999999998643211 01111111
Q ss_pred hccCCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 659 LDGNAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 659 ld~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
.....+.+|..+++++.+++.+||..+ |.+||++.+++.
T Consensus 226 ~~~~~~~~~~~~~~~~~~li~~~l~~~--p~~Rpt~~~ll~ 264 (268)
T cd06624 226 MFKIHPEIPESLSAEAKNFILRCFEPD--PDKRASAHDLLQ 264 (268)
T ss_pred hhccCCCCCcccCHHHHHHHHHHcCCC--chhCCCHHHHHh
Confidence 222334566678889999999999999 999999999875
No 145
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=2.4e-32 Score=293.88 Aligned_cols=213 Identities=20% Similarity=0.292 Sum_probs=166.8
Q ss_pred cccccCCceEEEEEEE---CCeEEEEEEccCC----CCHHHHHHHHHHHhcc---CCCCccceeeccc-------cceEE
Q 003594 468 RLKCAGDWTNVYRGRL---NHASVAIKTLNNG----LSEEDFQAKVSFLTAV---RHPHLVAVMGCCS-------ELKCI 530 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~---~~~~vAiK~l~~~----~~~~~~~~Ei~il~~l---~HpnIv~l~g~~~-------~~~~l 530 (808)
..+|.|+||.||+|.. ++..||||.+... .....+.+|+.++..+ +||||++++++|. ...++
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~~~~~~l 86 (290)
T cd07862 7 AEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTL 86 (290)
T ss_pred eEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCCCCcEEE
Confidence 4578999999999987 3578999998722 2234667788887766 6999999999873 25789
Q ss_pred EEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeC
Q 003594 531 VFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGL 610 (808)
Q Consensus 531 V~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~Df 610 (808)
||||++ ++|.+++... ....+++..+..|+.||+.||.|||+ .+|+||||||+|||++.++.+||+||
T Consensus 87 v~e~~~-~~l~~~~~~~--------~~~~~~~~~~~~i~~qi~~aL~~lH~---~~iiH~dlkp~Nil~~~~~~~kl~Df 154 (290)
T cd07862 87 VFEHVD-QDLTTYLDKV--------PEPGVPTETIKDMMFQLLRGLDFLHS---HRVVHRDLKPQNILVTSSGQIKLADF 154 (290)
T ss_pred EEccCC-CCHHHHHHhC--------CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEEcCCCCEEEccc
Confidence 999996 6999998542 23458999999999999999999999 66999999999999999999999999
Q ss_pred CCccc------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhcc----C
Q 003594 611 GLNIC------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDG----N 662 (808)
Q Consensus 611 Gla~~------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~----~ 662 (808)
|++.. ..++.++|||||||++|||++|++||...... ..+..+++. .
T Consensus 155 g~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~-----~~~~~i~~~~~~~~ 229 (290)
T cd07862 155 GLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV-----DQLGKILDVIGLPG 229 (290)
T ss_pred cceEeccCCcccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHH-----HHHHHHHHHhCCCC
Confidence 98742 23578899999999999999999999643211 111111110 0
Q ss_pred CCC----------------------CChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 663 AGI----------------------WPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 663 ~~~----------------------~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
... +....+..+.+|+.+||+.| |.+|||+.++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~--P~~R~s~~~~l~ 286 (290)
T cd07862 230 EEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFN--PAKRISAYSALS 286 (290)
T ss_pred hhhchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccC--chhcCCHHHHhc
Confidence 000 11245678899999999999 999999999874
No 146
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=3e-32 Score=299.77 Aligned_cols=217 Identities=16% Similarity=0.198 Sum_probs=174.2
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccC-----CCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNN-----GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPN 537 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~-----~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~ 537 (808)
.+.+|.|+||.||++.+ ++..||+|++.. ......+..|+.++..++||||+++++++.+ ..||||||+++
T Consensus 6 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ey~~~ 85 (332)
T cd05623 6 LKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVMDYYVG 85 (332)
T ss_pred EEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEEeccCC
Confidence 35678999999999998 468899999862 1223458889999999999999999999865 78999999999
Q ss_pred CCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--
Q 003594 538 GNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-- 615 (808)
Q Consensus 538 gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-- 615 (808)
|+|.+++... ...+++..+..|+.||+.||.|||+ .+|+||||||+|||++.++.+||+|||++..
T Consensus 86 g~L~~~l~~~---------~~~l~~~~~~~~~~qi~~al~~lH~---~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~ 153 (332)
T cd05623 86 GDLLTLLSKF---------EDRLPEDMARFYLAEMVIAIDSVHQ---LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLM 153 (332)
T ss_pred CcHHHHHHHh---------cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEEeecchheecc
Confidence 9999999532 3468999999999999999999999 6699999999999999999999999998632
Q ss_pred -----------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhcc-CCCC
Q 003594 616 -----------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDG-NAGI 665 (808)
Q Consensus 616 -----------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~-~~~~ 665 (808)
..++.++|||||||++|||++|++||..... ...+..+... ....
T Consensus 154 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~-----~~~~~~i~~~~~~~~ 228 (332)
T cd05623 154 EDGTVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESL-----VETYGKIMNHKERFQ 228 (332)
T ss_pred cCCcceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCH-----HHHHHHHhCCCcccc
Confidence 1256789999999999999999999964321 1222233322 1122
Q ss_pred CC---hhhHHHHHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 666 WP---LDLAEELAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 666 ~p---~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
+| ..++..+.+|+.+|+..++.+..|+++.++++.
T Consensus 229 ~p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 229 FPAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred CCCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 22 356889999999999877666678898888765
No 147
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=4.6e-32 Score=298.27 Aligned_cols=217 Identities=15% Similarity=0.170 Sum_probs=172.9
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccC-----CCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNN-----GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPN 537 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~-----~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~ 537 (808)
.+.+|.|+||.||++.. +++.||||++.. ......|.+|+.++..++||||++++++|.+ ..|+||||++|
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g 85 (331)
T cd05597 6 LKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVMDYYVG 85 (331)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEEecCCC
Confidence 45678999999999998 578999999862 1233568899999999999999999999865 78999999999
Q ss_pred CCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--
Q 003594 538 GNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-- 615 (808)
Q Consensus 538 gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-- 615 (808)
|+|.+++.. ....+++..+..|+.||+.||.|||+ ++|+||||||+|||++.++.+||+|||++..
T Consensus 86 ~~L~~~l~~---------~~~~~~~~~~~~~~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~ 153 (331)
T cd05597 86 GDLLTLLSK---------FEDRLPEDMARFYLAEMVLAIDSVHQ---LGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLL 153 (331)
T ss_pred CcHHHHHHH---------hcCCCCHHHHHHHHHHHHHHHHHHHh---CCeEECCCCHHHEEECCCCCEEEEECCceeecC
Confidence 999999953 23468999999999999999999999 6699999999999999999999999998632
Q ss_pred -----------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhcc-CC--
Q 003594 616 -----------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDG-NA-- 663 (808)
Q Consensus 616 -----------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~-~~-- 663 (808)
..++.++|||||||++|+|++|+.||..... ...+..+... ..
T Consensus 154 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~-----~~~~~~i~~~~~~~~ 228 (331)
T cd05597 154 ADGTVQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL-----VETYGKIMNHKEHFQ 228 (331)
T ss_pred CCCCccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCH-----HHHHHHHHcCCCccc
Confidence 1145689999999999999999999964321 1112222221 11
Q ss_pred -CCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 664 -GIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 664 -~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
+......+..+.+++.+||..++++..||++.+++..
T Consensus 229 ~~~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 229 FPPDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred CCCccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 1112346889999999999876555668898888765
No 148
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=6.7e-33 Score=301.69 Aligned_cols=221 Identities=21% Similarity=0.354 Sum_probs=183.5
Q ss_pred ccccCCceEEEEEEECC-eEEEEEEccCCC---CHHHHHHHHHHHhccCCCCccceeeccc--cceEEEEeecCCCCHHH
Q 003594 469 LKCAGDWTNVYRGRLNH-ASVAIKTLNNGL---SEEDFQAKVSFLTAVRHPHLVAVMGCCS--ELKCIVFEYMPNGNLRD 542 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~~~-~~vAiK~l~~~~---~~~~~~~Ei~il~~l~HpnIv~l~g~~~--~~~~lV~Ey~~~gsL~~ 542 (808)
-+|+|-||.|..+...| ..||||.++... ....|..|+.+|.+|+|||||.|+|+|. +.+++|+|||++|+|.+
T Consensus 545 kiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYmEnGDLnq 624 (807)
T KOG1094|consen 545 KIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYMENGDLNQ 624 (807)
T ss_pred hhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHHhcCcHHH
Confidence 35899999999999976 999999999433 2478999999999999999999999994 48899999999999999
Q ss_pred HHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-------
Q 003594 543 KLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC------- 615 (808)
Q Consensus 543 ~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~------- 615 (808)
+|..+. .+.+.-....+|+.||++|++||.+ .++|||||.+.|+|+|.++++||+|||+++.
T Consensus 625 Fl~ahe--------apt~~t~~~vsi~tqiasgmaYLes---~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy 693 (807)
T KOG1094|consen 625 FLSAHE--------LPTAETAPGVSICTQIASGMAYLES---LNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYY 693 (807)
T ss_pred HHHhcc--------CcccccchhHHHHHHHHHHHHHHHh---hchhhccccccceeecCcccEEecCcccccccccCCce
Confidence 997652 1224455567899999999999999 6699999999999999999999999999973
Q ss_pred --------------------CCCCcchhhHhHHHHHHHHHc--CCCCchhhHHHhhhcHHHHHHHhcc----CCCCCChh
Q 003594 616 --------------------DQLNVRSDIRAFGTLLLHLLT--GRNWAGLVEKAMALDQTTLMQVLDG----NAGIWPLD 669 (808)
Q Consensus 616 --------------------~~~t~ksDVwS~Gvil~ellt--G~~P~~~~~~~~~~~~~~~~~~ld~----~~~~~p~~ 669 (808)
+.+|.+||||+||++|||+++ ...||...... ..-+....+++. .....|..
T Consensus 694 ~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e--~vven~~~~~~~~~~~~~l~~P~~ 771 (807)
T KOG1094|consen 694 RVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDE--QVVENAGEFFRDQGRQVVLSRPPA 771 (807)
T ss_pred eeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHH--HHHHhhhhhcCCCCcceeccCCCc
Confidence 568999999999999999876 56788765332 111223333332 23456788
Q ss_pred hHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHH
Q 003594 670 LAEELAGIALKCLSADQDANRDLRIAGVMKELDEV 704 (808)
Q Consensus 670 ~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l 704 (808)
++..+.+++++||..+ ..+||++.++...|+..
T Consensus 772 cp~~lyelml~Cw~~e--s~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 772 CPQGLYELMLRCWRRE--SEQRPSFEQLHLFLQED 804 (807)
T ss_pred CcHHHHHHHHHHhchh--hhcCCCHHHHHHHHHHh
Confidence 9999999999999999 89999999999888754
No 149
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=3.5e-32 Score=289.29 Aligned_cols=219 Identities=25% Similarity=0.428 Sum_probs=179.2
Q ss_pred ccccccCCceEEEEEEEC--C---eEEEEEEccCCCC---HHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecC
Q 003594 467 FRLKCAGDWTNVYRGRLN--H---ASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMP 536 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~~--~---~~vAiK~l~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~ 536 (808)
.+.+|+|+||.||+|.+. + ..||||.+..... ...|..|+.+++.++||||+++++++.+ ..++||||++
T Consensus 9 ~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~e~~~ 88 (269)
T cd05065 9 EEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIITEFME 88 (269)
T ss_pred EeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEEecCC
Confidence 355689999999999982 3 3699999874332 3579999999999999999999999865 6799999999
Q ss_pred CCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-
Q 003594 537 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC- 615 (808)
Q Consensus 537 ~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~- 615 (808)
+|+|.+++.. ....+++..++.++.|++.||.|||+ .+++||||||+|||++.++.+||+|||++..
T Consensus 89 ~~~L~~~l~~---------~~~~~~~~~~~~i~~~l~~al~~lH~---~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~ 156 (269)
T cd05065 89 NGALDSFLRQ---------NDGQFTVIQLVGMLRGIAAGMKYLSE---MNYVHRDLAARNILVNSNLVCKVSDFGLSRFL 156 (269)
T ss_pred CCcHHHHHhh---------CCCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecccChheEEEcCCCcEEECCCcccccc
Confidence 9999999953 23468999999999999999999999 5699999999999999999999999998632
Q ss_pred -----------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCCCC
Q 003594 616 -----------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNAGI 665 (808)
Q Consensus 616 -----------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~~~ 665 (808)
..++.++|||||||++|||++ |.+||..... ......+......+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~-----~~~~~~i~~~~~~~ 231 (269)
T cd05065 157 EDDTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN-----QDVINAIEQDYRLP 231 (269)
T ss_pred ccCccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCH-----HHHHHHHHcCCcCC
Confidence 234678999999999999887 9999864321 11222222223334
Q ss_pred CChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHH
Q 003594 666 WPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEV 704 (808)
Q Consensus 666 ~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l 704 (808)
.+..++..+.+++.+||+.+ |..||++.+|+..|+.+
T Consensus 232 ~~~~~~~~~~~li~~~l~~~--p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 232 PPMDCPTALHQLMLDCWQKD--RNARPKFGQIVSTLDKM 268 (269)
T ss_pred CcccCCHHHHHHHHHHcCCC--hhhCcCHHHHHHHHHhh
Confidence 45677889999999999999 99999999999988764
No 150
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=5e-32 Score=286.38 Aligned_cols=218 Identities=31% Similarity=0.483 Sum_probs=182.6
Q ss_pred cccccCCceEEEEEEE-CCeEEEEEEccC-CCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCHHHH
Q 003594 468 RLKCAGDWTNVYRGRL-NHASVAIKTLNN-GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNLRDK 543 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~-~~~~vAiK~l~~-~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL~~~ 543 (808)
+.+|.|+||.||++.+ ++..||||.+.. ....+.+.+|+.++++++||||+++++++.+ ..++||||+++++|.++
T Consensus 12 ~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~ 91 (261)
T cd05034 12 RKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYMSKGSLLDF 91 (261)
T ss_pred eeeccCcceEEEEEEEcCCceEEEEEecCCccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEeccCCCCHHHH
Confidence 4567899999999998 457899999983 4556789999999999999999999999865 78999999999999999
Q ss_pred HhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--------
Q 003594 544 LFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-------- 615 (808)
Q Consensus 544 l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-------- 615 (808)
+... ....+++..+..++.+++.||.|||+ .+|+|+||||+||+++.++.+||+|||++..
T Consensus 92 i~~~--------~~~~~~~~~~~~~~~~i~~al~~lh~---~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~ 160 (261)
T cd05034 92 LKSG--------EGKKLRLPQLVDMAAQIAEGMAYLES---RNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTA 160 (261)
T ss_pred Hhcc--------ccCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcchheEEEcCCCCEEECccccceeccchhhhh
Confidence 9542 23468999999999999999999999 5699999999999999999999999998642
Q ss_pred ------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHHHHH
Q 003594 616 ------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAG 676 (808)
Q Consensus 616 ------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~ 676 (808)
..++.++||||||+++|+|+| |+.||.... ....+..+........+...+..+.+
T Consensus 161 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (261)
T cd05034 161 REGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMT-----NREVLEQVERGYRMPRPPNCPEELYD 235 (261)
T ss_pred hhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHHcCCCCCCCCCCCHHHHH
Confidence 235778999999999999999 999985421 12233334333344455667889999
Q ss_pred HHHHhhccCCCcCccccHHhhHHHHHH
Q 003594 677 IALKCLSADQDANRDLRIAGVMKELDE 703 (808)
Q Consensus 677 Li~~Cl~~dp~p~~Rps~~evl~~L~~ 703 (808)
++.+||..+ |..||++.++...|+.
T Consensus 236 ~i~~~l~~~--p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 236 LMLQCWDKD--PEERPTFEYLQSFLED 260 (261)
T ss_pred HHHHHcccC--cccCCCHHHHHHHHhc
Confidence 999999999 9999999999988864
No 151
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.7e-32 Score=300.58 Aligned_cols=207 Identities=21% Similarity=0.312 Sum_probs=170.5
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccCC-----CCHHHHHHHHHHHhcc-CCCCccceeecccc--ceEEEEeecC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNNG-----LSEEDFQAKVSFLTAV-RHPHLVAVMGCCSE--LKCIVFEYMP 536 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-----~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~~~lV~Ey~~ 536 (808)
.+.+|+|+||.||+|.. ++..||||++... .....+..|..++..+ +||+|+++++++.+ ..|+||||++
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~ 84 (323)
T cd05616 5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYVN 84 (323)
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEEcCCC
Confidence 35678999999999998 4679999998732 1234567788888877 58999999998865 7899999999
Q ss_pred CCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-
Q 003594 537 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC- 615 (808)
Q Consensus 537 ~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~- 615 (808)
+|+|.+++. ....+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 85 ~g~L~~~~~----------~~~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~ 151 (323)
T cd05616 85 GGDLMYQIQ----------QVGRFKEPHAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 151 (323)
T ss_pred CCCHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHH---CCEEecCCCHHHeEECCCCcEEEccCCCceec
Confidence 999999984 34568999999999999999999999 5699999999999999999999999998752
Q ss_pred ------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhH
Q 003594 616 ------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLA 671 (808)
Q Consensus 616 ------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~ 671 (808)
..++.++|||||||++|+|+||++||..... ...+..+.. ....+|...+
T Consensus 152 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~-----~~~~~~i~~-~~~~~p~~~s 225 (323)
T cd05616 152 MWDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE-----DELFQSIME-HNVAYPKSMS 225 (323)
T ss_pred CCCCCccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCH-----HHHHHHHHh-CCCCCCCcCC
Confidence 2467899999999999999999999975321 122223332 3345677788
Q ss_pred HHHHHHHHHhhccCCCcCccccH
Q 003594 672 EELAGIALKCLSADQDANRDLRI 694 (808)
Q Consensus 672 ~~l~~Li~~Cl~~dp~p~~Rps~ 694 (808)
.++.+|+.+||+.| |..|++.
T Consensus 226 ~~~~~li~~~l~~~--p~~R~~~ 246 (323)
T cd05616 226 KEAVAICKGLMTKH--PGKRLGC 246 (323)
T ss_pred HHHHHHHHHHcccC--HHhcCCC
Confidence 99999999999999 9999984
No 152
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=2.8e-32 Score=292.30 Aligned_cols=225 Identities=25% Similarity=0.394 Sum_probs=180.5
Q ss_pred cccccCCceEEEEEEE-------CCeEEEEEEccCCC--CHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecC
Q 003594 468 RLKCAGDWTNVYRGRL-------NHASVAIKTLNNGL--SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMP 536 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~-------~~~~vAiK~l~~~~--~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~ 536 (808)
..+|+|+||.||++.. ++..||+|.+.... ....|.+|+.+++.++||||+++++++.+ ..++||||++
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 90 (280)
T cd05092 11 WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLMVFEYMR 90 (280)
T ss_pred cccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEEEEecCC
Confidence 4567899999999974 35689999987322 24679999999999999999999999865 7899999999
Q ss_pred CCCHHHHHhhccccccc-----cccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCC
Q 003594 537 NGNLRDKLFTSQRNYKN-----CSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLG 611 (808)
Q Consensus 537 ~gsL~~~l~~~~~~~~~-----~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfG 611 (808)
+|+|.+++......... ......+++..++.++.||+.||.|||+ .+|+||||||+|||+++++.+||+|||
T Consensus 91 ~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~~i~H~dlkp~nil~~~~~~~kL~dfg 167 (280)
T cd05092 91 HGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLAS---LHFVHRDLATRNCLVGQGLVVKIGDFG 167 (280)
T ss_pred CCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHH---CCeecccccHhhEEEcCCCCEEECCCC
Confidence 99999999654211000 0112468999999999999999999999 569999999999999999999999999
Q ss_pred Cccc---------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCC
Q 003594 612 LNIC---------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNA 663 (808)
Q Consensus 612 la~~---------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~ 663 (808)
++.. ..++.++|||||||++|+|++ |.+||..... ......+..+..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-----~~~~~~~~~~~~ 242 (280)
T cd05092 168 MSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSN-----TEAIECITQGRE 242 (280)
T ss_pred ceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCH-----HHHHHHHHcCcc
Confidence 8741 235778999999999999998 8999854321 222333444444
Q ss_pred CCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHH
Q 003594 664 GIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELD 702 (808)
Q Consensus 664 ~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~ 702 (808)
...+..++..+.+|+.+||..| |..||++.+|+..|+
T Consensus 243 ~~~~~~~~~~~~~li~~cl~~~--P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 243 LERPRTCPPEVYAIMQGCWQRE--PQQRMVIKDIHSRLQ 279 (280)
T ss_pred CCCCCCCCHHHHHHHHHHccCC--hhhCCCHHHHHHHHh
Confidence 4455677889999999999999 999999999998875
No 153
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-32 Score=307.60 Aligned_cols=213 Identities=24% Similarity=0.338 Sum_probs=180.4
Q ss_pred hhccccccccccccCCceEEEEEEE--CCeEEEEEEccC-----CCCHHHHHHHHHHHhcc-CCCCccceeecccc--ce
Q 003594 459 ATEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN-----GLSEEDFQAKVSFLTAV-RHPHLVAVMGCCSE--LK 528 (808)
Q Consensus 459 at~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~-----~~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~~ 528 (808)
..++|.- .+++|+|+||+|+++.+ ++..+|||+++. ....+....|.+|+... +||.++.|+.+|.. +.
T Consensus 366 ~l~~F~~-l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l 444 (694)
T KOG0694|consen 366 TLDDFRL-LAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHL 444 (694)
T ss_pred cccceEE-EEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeE
Confidence 3455543 47789999999999999 568999999983 33457788899998888 59999999999965 89
Q ss_pred EEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEE
Q 003594 529 CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKIS 608 (808)
Q Consensus 529 ~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~ 608 (808)
|.||||+.||++..+. ....+++..+..|+.+|+.||.|||++ +||+||||.+|||||..|.+||+
T Consensus 445 ~fvmey~~Ggdm~~~~-----------~~~~F~e~rarfyaAev~l~L~fLH~~---~IIYRDlKLdNiLLD~eGh~kiA 510 (694)
T KOG0694|consen 445 FFVMEYVAGGDLMHHI-----------HTDVFSEPRARFYAAEVVLGLQFLHEN---GIIYRDLKLDNLLLDTEGHVKIA 510 (694)
T ss_pred EEEEEecCCCcEEEEE-----------ecccccHHHHHHHHHHHHHHHHHHHhc---CceeeecchhheEEcccCcEEec
Confidence 9999999999944333 456799999999999999999999994 59999999999999999999999
Q ss_pred eCCCccc-------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCC
Q 003594 609 GLGLNIC-------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNA 663 (808)
Q Consensus 609 DfGla~~-------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~ 663 (808)
|||+++. ..|+..+|+|||||+||||+.|.+||... .+.+.+..++ ...
T Consensus 511 DFGlcKe~m~~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gd-----dEee~FdsI~-~d~ 584 (694)
T KOG0694|consen 511 DFGLCKEGMGQGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGD-----DEEEVFDSIV-NDE 584 (694)
T ss_pred ccccccccCCCCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCC-----CHHHHHHHHh-cCC
Confidence 9999974 35899999999999999999999999763 2233344443 345
Q ss_pred CCCChhhHHHHHHHHHHhhccCCCcCccccH
Q 003594 664 GIWPLDLAEELAGIALKCLSADQDANRDLRI 694 (808)
Q Consensus 664 ~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~ 694 (808)
..+|..++.+..+|+.++|..+ |..|..+
T Consensus 585 ~~yP~~ls~ea~~il~~ll~k~--p~kRLG~ 613 (694)
T KOG0694|consen 585 VRYPRFLSKEAIAIMRRLLRKN--PEKRLGS 613 (694)
T ss_pred CCCCCcccHHHHHHHHHHhccC--cccccCC
Confidence 6788899999999999999999 8899876
No 154
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=2.9e-32 Score=291.47 Aligned_cols=223 Identities=24% Similarity=0.417 Sum_probs=180.5
Q ss_pred cccccCCceEEEEEEEC------CeEEEEEEccCCCC---HHHHHHHHHHHhccCCCCccceeecccc----ceEEEEee
Q 003594 468 RLKCAGDWTNVYRGRLN------HASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE----LKCIVFEY 534 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~~------~~~vAiK~l~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~----~~~lV~Ey 534 (808)
+.+|+|+||.||+|.++ +..||||++..... ...|.+|+.+++.+.||||+++++++.. ..++||||
T Consensus 10 ~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~ 89 (284)
T cd05038 10 KQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSLRLIMEY 89 (284)
T ss_pred eeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCceEEEEec
Confidence 55689999999999873 57899999984433 5689999999999999999999998855 67999999
Q ss_pred cCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCcc
Q 003594 535 MPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNI 614 (808)
Q Consensus 535 ~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~ 614 (808)
+++|+|.+++... ...+++..+..++.|++.||.|||+ .+|+||||||+|||++.++.++|+|||++.
T Consensus 90 ~~~~~l~~~l~~~---------~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 157 (284)
T cd05038 90 LPSGSLRDYLQRH---------RDQINLKRLLLFSSQICKGMDYLGS---QRYIHRDLAARNILVESEDLVKISDFGLAK 157 (284)
T ss_pred CCCCCHHHHHHhC---------ccccCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEccccccc
Confidence 9999999999532 2369999999999999999999999 569999999999999999999999999874
Q ss_pred c----------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHh-h--------hcHHHHHH
Q 003594 615 C----------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAM-A--------LDQTTLMQ 657 (808)
Q Consensus 615 ~----------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~-~--------~~~~~~~~ 657 (808)
. ..++.++||||||+++|+|+||..|+....... . .....+..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05038 158 VLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLRMIGIAQGQMIVTRLLE 237 (284)
T ss_pred ccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhccccccccccccHHHHHH
Confidence 3 124567999999999999999998875422110 0 00111222
Q ss_pred Hhc-cCCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHH
Q 003594 658 VLD-GNAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEV 704 (808)
Q Consensus 658 ~ld-~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l 704 (808)
.+. ......+..++..+.+|+.+||..+ |..||++.+|+++|+.+
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~li~~cl~~~--p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 238 LLKEGERLPRPPSCPDEVYDLMKLCWEAE--PQDRPSFADLILIVDRL 283 (284)
T ss_pred HHHcCCcCCCCccCCHHHHHHHHHHhccC--hhhCCCHHHHHHHHhhc
Confidence 222 2223334566789999999999999 99999999999999876
No 155
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=1.2e-32 Score=302.40 Aligned_cols=212 Identities=23% Similarity=0.323 Sum_probs=172.5
Q ss_pred ccccCCceEEEEEEE--CCeEEEEEEccCC-----CCHHHHHHHHHHHhcc-CCCCccceeecccc--ceEEEEeecCCC
Q 003594 469 LKCAGDWTNVYRGRL--NHASVAIKTLNNG-----LSEEDFQAKVSFLTAV-RHPHLVAVMGCCSE--LKCIVFEYMPNG 538 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-----~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~~~lV~Ey~~~g 538 (808)
++|+|+||.||+|.. +++.||+|++... .....+.+|+.++.++ +||||+++++++.+ ..|+||||+++|
T Consensus 2 ~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 81 (327)
T cd05617 2 VIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNGG 81 (327)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCCC
Confidence 578999999999998 5689999999732 1234578899999888 69999999999865 789999999999
Q ss_pred CHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc---
Q 003594 539 NLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC--- 615 (808)
Q Consensus 539 sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~--- 615 (808)
+|.+++. ....+++..+..|+.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 82 ~L~~~~~----------~~~~l~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~ 148 (327)
T cd05617 82 DLMFHMQ----------RQRKLPEEHARFYAAEICIALNFLHE---RGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLG 148 (327)
T ss_pred cHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEeCCCCEEEeccccceeccC
Confidence 9999883 34569999999999999999999999 6699999999999999999999999998742
Q ss_pred ----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHH-hhhcHHHHHHHhccCCCCCChhhHH
Q 003594 616 ----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKA-MALDQTTLMQVLDGNAGIWPLDLAE 672 (808)
Q Consensus 616 ----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~-~~~~~~~~~~~ld~~~~~~p~~~~~ 672 (808)
..++.++|||||||+||+|++|++||...... ...........+......+|...+.
T Consensus 149 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 228 (327)
T cd05617 149 PGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRFLSV 228 (327)
T ss_pred CCCceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhCCCCCCCCCCH
Confidence 24678999999999999999999999642210 0011122223333334456777889
Q ss_pred HHHHHHHHhhccCCCcCccccHH
Q 003594 673 ELAGIALKCLSADQDANRDLRIA 695 (808)
Q Consensus 673 ~l~~Li~~Cl~~dp~p~~Rps~~ 695 (808)
.+.+++.+||+.| |..|+++.
T Consensus 229 ~~~~li~~~L~~d--P~~R~~~~ 249 (327)
T cd05617 229 KASHVLKGFLNKD--PKERLGCQ 249 (327)
T ss_pred HHHHHHHHHhccC--HHHcCCCC
Confidence 9999999999999 99999854
No 156
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=2.9e-32 Score=293.64 Aligned_cols=234 Identities=21% Similarity=0.356 Sum_probs=185.5
Q ss_pred ccccccccccccCCceEEEEEEEC-------CeEEEEEEccCCCC---HHHHHHHHHHHhcc-CCCCccceeecccc--c
Q 003594 461 EDFSERFRLKCAGDWTNVYRGRLN-------HASVAIKTLNNGLS---EEDFQAKVSFLTAV-RHPHLVAVMGCCSE--L 527 (808)
Q Consensus 461 ~~f~~~~~i~g~G~~g~Vy~~~~~-------~~~vAiK~l~~~~~---~~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~ 527 (808)
++|.. .+.+|+|+||.||++.+. ...||+|.+..... ...+.+|+.++.++ +||||++++++|.. .
T Consensus 12 ~~~~~-~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~ 90 (293)
T cd05053 12 DRLTL-GKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEGP 90 (293)
T ss_pred hHeEE-eeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCCC
Confidence 34543 356789999999999873 26799999874332 24688999999999 89999999999865 6
Q ss_pred eEEEEeecCCCCHHHHHhhcccccc------ccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCC
Q 003594 528 KCIVFEYMPNGNLRDKLFTSQRNYK------NCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDR 601 (808)
Q Consensus 528 ~~lV~Ey~~~gsL~~~l~~~~~~~~------~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~ 601 (808)
.++||||+++|+|.+++........ .......+++..++.++.|++.||.|||+ .+|+||||||+|||++.
T Consensus 91 ~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivH~dlkp~Nil~~~ 167 (293)
T cd05053 91 LYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLAS---KKCIHRDLAARNVLVTE 167 (293)
T ss_pred eEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHH---CCccccccceeeEEEcC
Confidence 8999999999999999965321000 00124578999999999999999999999 56999999999999999
Q ss_pred CccEEEEeCCCccc---------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHH
Q 003594 602 NLVAKISGLGLNIC---------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQT 653 (808)
Q Consensus 602 ~~~~kl~DfGla~~---------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~ 653 (808)
++.+||+|||+++. ..++.++|||||||++|+|++ |..||..... ..
T Consensus 168 ~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-----~~ 242 (293)
T cd05053 168 DHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV-----EE 242 (293)
T ss_pred CCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCH-----HH
Confidence 99999999998742 235678999999999999998 8888864211 11
Q ss_pred HHHHHhccCCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHHH
Q 003594 654 TLMQVLDGNAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVR 705 (808)
Q Consensus 654 ~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~ 705 (808)
....+........|..++..+.+|+.+||..| |..|||+.++++.|+.+.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~--p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 243 LFKLLKEGYRMEKPQNCTQELYHLMRDCWHEV--PSQRPTFKQLVEDLDRML 292 (293)
T ss_pred HHHHHHcCCcCCCCCCCCHHHHHHHHHHcccC--cccCcCHHHHHHHHHHhh
Confidence 22223333444566678889999999999999 999999999999998764
No 157
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.8e-32 Score=295.30 Aligned_cols=231 Identities=21% Similarity=0.331 Sum_probs=183.8
Q ss_pred ccccccCCceEEEEEEEC---------CeEEEEEEccCCCC---HHHHHHHHHHHhcc-CCCCccceeecccc--ceEEE
Q 003594 467 FRLKCAGDWTNVYRGRLN---------HASVAIKTLNNGLS---EEDFQAKVSFLTAV-RHPHLVAVMGCCSE--LKCIV 531 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~~---------~~~vAiK~l~~~~~---~~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~~~lV 531 (808)
.+.+|+|+||.||++.+. +..||+|.+..... ...+.+|+.++..+ +||||++++++|.+ ..|+|
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~lv 102 (307)
T cd05098 23 GKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVI 102 (307)
T ss_pred eeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEE
Confidence 456689999999999862 24699999984322 34688899999999 79999999999865 78999
Q ss_pred EeecCCCCHHHHHhhcccccc------ccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccE
Q 003594 532 FEYMPNGNLRDKLFTSQRNYK------NCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVA 605 (808)
Q Consensus 532 ~Ey~~~gsL~~~l~~~~~~~~------~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~ 605 (808)
|||+++|+|.+++........ .......++|..++.|+.|++.||.|||+ .+++||||||+|||++.++.+
T Consensus 103 ~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~gi~H~dlkp~Nill~~~~~~ 179 (307)
T cd05098 103 VEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVM 179 (307)
T ss_pred EecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH---CCcccccccHHheEEcCCCcE
Confidence 999999999999965421000 00122468999999999999999999999 569999999999999999999
Q ss_pred EEEeCCCccc---------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHH
Q 003594 606 KISGLGLNIC---------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQ 657 (808)
Q Consensus 606 kl~DfGla~~---------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~ 657 (808)
||+|||++.. ..++.++|||||||++|+|++ |.+||..... ......
T Consensus 180 kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~-----~~~~~~ 254 (307)
T cd05098 180 KIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV-----EELFKL 254 (307)
T ss_pred EECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH-----HHHHHH
Confidence 9999998742 225678999999999999998 8888864211 111222
Q ss_pred HhccCCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHHHHh
Q 003594 658 VLDGNAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVRKK 707 (808)
Q Consensus 658 ~ld~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~~~ 707 (808)
+........|...+.++.+|+.+||..+ |..||++.+|++.|+++...
T Consensus 255 ~~~~~~~~~~~~~~~~~~~li~~~l~~~--p~~Rps~~evl~~l~~~~~~ 302 (307)
T cd05098 255 LKEGHRMDKPSNCTNELYMMMRDCWHAV--PSQRPTFKQLVEDLDRILAL 302 (307)
T ss_pred HHcCCCCCCCCcCCHHHHHHHHHHcccC--hhhCcCHHHHHHHHHHHHHH
Confidence 2223334556677899999999999999 99999999999999998764
No 158
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=1.5e-32 Score=301.22 Aligned_cols=211 Identities=22% Similarity=0.252 Sum_probs=169.1
Q ss_pred ccccCCceEEEEEEE--CCeEEEEEEccCC-----CCHHHHHHHHH-HHhccCCCCccceeecccc--ceEEEEeecCCC
Q 003594 469 LKCAGDWTNVYRGRL--NHASVAIKTLNNG-----LSEEDFQAKVS-FLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNG 538 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-----~~~~~~~~Ei~-il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~g 538 (808)
.+|.|+||.||+|.+ ++..||+|++... .....+..|.. +++.++||||+++++++.+ ..|+||||+++|
T Consensus 2 ~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~~ 81 (325)
T cd05602 2 VIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGG 81 (325)
T ss_pred eeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCCC
Confidence 578999999999998 5688999998721 12234455544 5678899999999999855 789999999999
Q ss_pred CHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc---
Q 003594 539 NLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC--- 615 (808)
Q Consensus 539 sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~--- 615 (808)
+|.+++. ....+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 82 ~L~~~~~----------~~~~~~~~~~~~~~~qi~~~L~~lH~---~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~ 148 (325)
T cd05602 82 ELFYHLQ----------RERCFLEPRARFYAAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKENIE 148 (325)
T ss_pred cHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHeEECCCCCEEEccCCCCccccc
Confidence 9999994 34567888899999999999999999 5699999999999999999999999998742
Q ss_pred ----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHH
Q 003594 616 ----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEE 673 (808)
Q Consensus 616 ----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~ 673 (808)
..++.++|||||||++|+|++|.+||..... ...+..+.. .....+...+..
T Consensus 149 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~~~~i~~-~~~~~~~~~~~~ 222 (325)
T cd05602 149 HNGTTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT-----AEMYDNILN-KPLQLKPNITNS 222 (325)
T ss_pred CCCCcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCH-----HHHHHHHHh-CCcCCCCCCCHH
Confidence 2367899999999999999999999964321 122222222 223345577889
Q ss_pred HHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 674 LAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 674 l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
+.+++.+||+.| |..||++.+.+..
T Consensus 223 ~~~li~~~l~~~--p~~R~~~~~~~~~ 247 (325)
T cd05602 223 ARHLLEGLLQKD--RTKRLGAKDDFME 247 (325)
T ss_pred HHHHHHHHcccC--HHHCCCCCCCHHH
Confidence 999999999999 9999998765443
No 159
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=5.5e-32 Score=293.50 Aligned_cols=230 Identities=20% Similarity=0.344 Sum_probs=183.0
Q ss_pred cccccCCceEEEEEEE---------CCeEEEEEEccCCC---CHHHHHHHHHHHhcc-CCCCccceeecccc--ceEEEE
Q 003594 468 RLKCAGDWTNVYRGRL---------NHASVAIKTLNNGL---SEEDFQAKVSFLTAV-RHPHLVAVMGCCSE--LKCIVF 532 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~---------~~~~vAiK~l~~~~---~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~~~lV~ 532 (808)
..+|.|+||.||++.+ ++..||+|.+.... ....+.+|+.++..+ +||||+++++++.. ..++||
T Consensus 21 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~ 100 (304)
T cd05101 21 KPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIV 100 (304)
T ss_pred ceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEecCCceEEEE
Confidence 5678999999999975 23579999987432 235788999999999 89999999999865 689999
Q ss_pred eecCCCCHHHHHhhccccccc------cccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEE
Q 003594 533 EYMPNGNLRDKLFTSQRNYKN------CSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAK 606 (808)
Q Consensus 533 Ey~~~gsL~~~l~~~~~~~~~------~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~k 606 (808)
||+++|+|.+++......... ......++|..++.++.||+.||.|||+ .+|+||||||+|||++.++.+|
T Consensus 101 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~---~givH~dlkp~Nili~~~~~~k 177 (304)
T cd05101 101 EYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLAS---QKCIHRDLAARNVLVTENNVMK 177 (304)
T ss_pred ecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHH---CCeeecccccceEEEcCCCcEE
Confidence 999999999999754211000 0123468999999999999999999999 5699999999999999999999
Q ss_pred EEeCCCccc---------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHH
Q 003594 607 ISGLGLNIC---------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQV 658 (808)
Q Consensus 607 l~DfGla~~---------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ 658 (808)
|+|||+++. ..++.++||||||+++|+|++ |..||..... ......+
T Consensus 178 l~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-----~~~~~~~ 252 (304)
T cd05101 178 IADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPV-----EELFKLL 252 (304)
T ss_pred ECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCCH-----HHHHHHH
Confidence 999998742 225678999999999999998 7888754211 1122223
Q ss_pred hccCCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHHHHh
Q 003594 659 LDGNAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVRKK 707 (808)
Q Consensus 659 ld~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~~~ 707 (808)
........+..++..+.+|+.+||..+ |..||++.++++.|+++...
T Consensus 253 ~~~~~~~~~~~~~~~~~~li~~cl~~~--p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 253 KEGHRMDKPANCTNELYMMMRDCWHAI--PSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred HcCCcCCCCCCCCHHHHHHHHHHcccC--hhhCCCHHHHHHHHHHHHHh
Confidence 233334455678899999999999999 99999999999999988754
No 160
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=2.4e-33 Score=293.78 Aligned_cols=227 Identities=22% Similarity=0.306 Sum_probs=175.5
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccCCCCHHHHHHHHHHHhccCCCCccceeecccc-------ceEEEEeecCC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNNGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE-------LKCIVFEYMPN 537 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-------~~~lV~Ey~~~ 537 (808)
.+++|.|+||.||+|.+ ++..||||+.-.+.. --.+|+.+|+.++|||||+|+-+|.. ...|||||||
T Consensus 29 ~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r--~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlVleymP- 105 (364)
T KOG0658|consen 29 VRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR--YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLVLEYMP- 105 (364)
T ss_pred eEEEeecccceEEEEEEcCCCceeEEEEecCCCC--cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHHHHhch-
Confidence 46889999999999999 578999999863322 22479999999999999999988832 3468999998
Q ss_pred CCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCC-ccEEEEeCCCccc-
Q 003594 538 GNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRN-LVAKISGLGLNIC- 615 (808)
Q Consensus 538 gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~-~~~kl~DfGla~~- 615 (808)
-+|.++++... .....++...+.-+..||++||.|||+ .+|+||||||.|||+|.+ |.+||||||.|+.
T Consensus 106 ~tL~~~~r~~~------~~~~~mp~~~iKLYt~Qlfrgl~yLh~---~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L 176 (364)
T KOG0658|consen 106 ETLYRVIRHYT------RANQRMPLLEIKLYTYQLFRGLAYLHS---HGICHRDIKPQNLLVDPDTGVLKICDFGSAKVL 176 (364)
T ss_pred HHHHHHHHHHh------hcCCCCceeeeHHHHHHHHHHHHHHHh---cCcccCCCChheEEEcCCCCeEEeccCCcceee
Confidence 59999996432 245678888888999999999999999 569999999999999976 9999999999975
Q ss_pred ------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhh-------hc---HHHHHHH---
Q 003594 616 ------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMA-------LD---QTTLMQV--- 658 (808)
Q Consensus 616 ------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~-------~~---~~~~~~~--- 658 (808)
..|+.+.||||.|||+.||+-|+|-|........ .. ...+..+
T Consensus 177 ~~~epniSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~I~~mn~~ 256 (364)
T KOG0658|consen 177 VKGEPNISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTREDIKSMNPN 256 (364)
T ss_pred ccCCCceeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHHHhhcCcc
Confidence 4689999999999999999999998854211000 00 0000000
Q ss_pred ----hcc--CCCC----CChhhHHHHHHHHHHhhccCCCcCccccHHhhHH--HHHHHHHh
Q 003594 659 ----LDG--NAGI----WPLDLAEELAGIALKCLSADQDANRDLRIAGVMK--ELDEVRKK 707 (808)
Q Consensus 659 ----ld~--~~~~----~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~--~L~~l~~~ 707 (808)
..+ .... +....++++.+|+.++|.++ |..|.++.+++. .++.+++.
T Consensus 257 y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~--P~~R~~~~~~l~h~fFdelr~~ 315 (364)
T KOG0658|consen 257 YTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYS--PSKRLSALEALAHPFFDELRDP 315 (364)
T ss_pred cccccCcccccccceeecccCCCHHHHHHHHHHhccC--hhhcCCHHHHhcchhhHHhhCc
Confidence 001 0111 33467889999999999999 999999998884 45666654
No 161
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=3.7e-32 Score=300.52 Aligned_cols=231 Identities=23% Similarity=0.357 Sum_probs=181.0
Q ss_pred ccccccCCceEEEEEEE-------CCeEEEEEEccCCCC---HHHHHHHHHHHhcc-CCCCccceeecccc---ceEEEE
Q 003594 467 FRLKCAGDWTNVYRGRL-------NHASVAIKTLNNGLS---EEDFQAKVSFLTAV-RHPHLVAVMGCCSE---LKCIVF 532 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~-------~~~~vAiK~l~~~~~---~~~~~~Ei~il~~l-~HpnIv~l~g~~~~---~~~lV~ 532 (808)
.+.+|.|+||.||+|.+ +++.||||+++.... ...+.+|+.+|.++ +||||++++++|.. ..++||
T Consensus 12 ~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~~~~lv~ 91 (343)
T cd05103 12 GKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIV 91 (343)
T ss_pred cccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCCceEEEE
Confidence 45678999999999974 357899999974322 34688999999999 68999999998854 578999
Q ss_pred eecCCCCHHHHHhhccccccc---------------------------------------------------------cc
Q 003594 533 EYMPNGNLRDKLFTSQRNYKN---------------------------------------------------------CS 555 (808)
Q Consensus 533 Ey~~~gsL~~~l~~~~~~~~~---------------------------------------------------------~~ 555 (808)
||+++|+|.+++......... ..
T Consensus 92 ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (343)
T cd05103 92 EFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDL 171 (343)
T ss_pred eccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhhhhhhhh
Confidence 999999999999653210000 00
Q ss_pred cCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--------------------
Q 003594 556 RARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-------------------- 615 (808)
Q Consensus 556 ~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-------------------- 615 (808)
....++|..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||++..
T Consensus 172 ~~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~ 248 (343)
T cd05103 172 YKKVLTLEDLICYSFQVAKGMEFLAS---RKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM 248 (343)
T ss_pred hhccCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcceE
Confidence 12357899999999999999999999 6699999999999999999999999998742
Q ss_pred -------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHHHHHHHHHhhccCCC
Q 003594 616 -------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAGIALKCLSADQD 687 (808)
Q Consensus 616 -------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dp~ 687 (808)
..++.++||||||+++|+|++ |..||..... .......+........|...+..+.+++.+||+.+
T Consensus 249 aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~cl~~~-- 322 (343)
T cd05103 249 APETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKI----DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGE-- 322 (343)
T ss_pred CcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccc----cHHHHHHHhccCCCCCCCCCCHHHHHHHHHHccCC--
Confidence 235678999999999999997 8888854211 11122222233333444456778999999999999
Q ss_pred cCccccHHhhHHHHHHHHH
Q 003594 688 ANRDLRIAGVMKELDEVRK 706 (808)
Q Consensus 688 p~~Rps~~evl~~L~~l~~ 706 (808)
|..||++.+|++.|+.+.+
T Consensus 323 p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 323 PSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred hhhCcCHHHHHHHHHHHHh
Confidence 9999999999999998864
No 162
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=4.3e-32 Score=298.76 Aligned_cols=225 Identities=20% Similarity=0.247 Sum_probs=175.3
Q ss_pred ccccccccccccCCceEEEEEEE--CCeEEEEEEccCCCC---HHHHHHHHHHHhccCCCCccceeecccc--ceEEEEe
Q 003594 461 EDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFE 533 (808)
Q Consensus 461 ~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~E 533 (808)
++|.. .+.+|.|+||.||++.+ ++..||+|.+..... ...+.+|+.++.+++||||++++++|.+ ..+||||
T Consensus 5 ~~y~~-~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 5 DDFEK-ISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhe-eccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 34444 35668899999999998 578899999874322 3578999999999999999999999865 7899999
Q ss_pred ecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCc
Q 003594 534 YMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 613 (808)
Q Consensus 534 y~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla 613 (808)
|+++|+|.+++. ....+++.....++.+++.||.|||+. .+|+||||||+|||++.++.+||+|||++
T Consensus 84 ~~~~~~L~~~l~----------~~~~~~~~~~~~~~~~l~~~l~~lH~~--~~ivH~dlkp~Nili~~~~~~kL~Dfg~~ 151 (333)
T cd06650 84 HMDGGSLDQVLK----------KAGRIPEQILGKVSIAVIKGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVS 151 (333)
T ss_pred cCCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHhc--CCEEecCCChhhEEEcCCCCEEEeeCCcc
Confidence 999999999994 345689999999999999999999973 25999999999999999999999999987
Q ss_pred cc-----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhc-------------------
Q 003594 614 IC-----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALD------------------- 651 (808)
Q Consensus 614 ~~-----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~------------------- 651 (808)
.. ..++.++|||||||++|+|++|+.||..........
T Consensus 152 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (333)
T cd06650 152 GQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRP 231 (333)
T ss_pred hhhhhhccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCccc
Confidence 42 236788999999999999999999986422100000
Q ss_pred --------------------HHHHHHHhccCCCCCCh-hhHHHHHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 652 --------------------QTTLMQVLDGNAGIWPL-DLAEELAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 652 --------------------~~~~~~~ld~~~~~~p~-~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
......++....+..+. ..+.++.+|+.+||+.| |..||++.+++..
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~--P~~Rpt~~ell~h 299 (333)
T cd06650 232 RPPGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKN--PAERADLKQLMVH 299 (333)
T ss_pred CCccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCC--cccCcCHHHHhhC
Confidence 00001111111111221 25678999999999999 9999999999753
No 163
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=2.1e-32 Score=292.71 Aligned_cols=212 Identities=25% Similarity=0.378 Sum_probs=167.8
Q ss_pred ccccCCceEEEEEEEC--------------------------CeEEEEEEccCCCC--HHHHHHHHHHHhccCCCCccce
Q 003594 469 LKCAGDWTNVYRGRLN--------------------------HASVAIKTLNNGLS--EEDFQAKVSFLTAVRHPHLVAV 520 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~~--------------------------~~~vAiK~l~~~~~--~~~~~~Ei~il~~l~HpnIv~l 520 (808)
.+|+|+||.||+|.+. ...||+|++..... ...|.+|+.+++.++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 4689999999999851 13599999873322 3568889999999999999999
Q ss_pred eecccc--ceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcc
Q 003594 521 MGCCSE--LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSIL 598 (808)
Q Consensus 521 ~g~~~~--~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NIL 598 (808)
+|+|.+ ..++||||+++|+|..++.. ....+++..+..|+.||+.||.|||+ ++|+||||||+|||
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~---------~~~~~~~~~~~~i~~qi~~~l~~lH~---~~iiH~dlkp~Nil 149 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRK---------EKGRVPVAWKITVAQQLASALSYLED---KNLVHGNVCAKNIL 149 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHc---CCccCCCCCcccEE
Confidence 999965 67999999999999999853 24568999999999999999999999 67999999999999
Q ss_pred cCCCc-------cEEEEeCCCccc----------------------CCCCcchhhHhHHHHHHHHH-cCCCCchhhHHHh
Q 003594 599 LDRNL-------VAKISGLGLNIC----------------------DQLNVRSDIRAFGTLLLHLL-TGRNWAGLVEKAM 648 (808)
Q Consensus 599 ld~~~-------~~kl~DfGla~~----------------------~~~t~ksDVwS~Gvil~ell-tG~~P~~~~~~~~ 648 (808)
++..+ .+|++|||++.. ..++.++|||||||++|||+ +|.+||.....
T Consensus 150 l~~~~~~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-- 227 (274)
T cd05076 150 LARLGLAEGTSPFIKLSDPGVSFTALSREERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTP-- 227 (274)
T ss_pred EeccCcccCccceeeecCCccccccccccccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccCh--
Confidence 97643 489999998632 23578899999999999995 69999864321
Q ss_pred hhcHHHHHHHhccCCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHH
Q 003594 649 ALDQTTLMQVLDGNAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKEL 701 (808)
Q Consensus 649 ~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L 701 (808)
......... ....|......+.+++.+||+.+ |..||++.+|++.|
T Consensus 228 ----~~~~~~~~~-~~~~~~~~~~~~~~li~~cl~~~--p~~Rps~~~il~~L 273 (274)
T cd05076 228 ----SEKERFYEK-KHRLPEPSCKELATLISQCLTYE--PTQRPSFRTILRDL 273 (274)
T ss_pred ----HHHHHHHHh-ccCCCCCCChHHHHHHHHHcccC--hhhCcCHHHHHHhh
Confidence 111111111 11233334568999999999999 99999999999876
No 164
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-33 Score=307.13 Aligned_cols=214 Identities=22% Similarity=0.349 Sum_probs=178.8
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCC--CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCHH
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNG--LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNLR 541 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~--~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL~ 541 (808)
.++|+|.||+||-|++ +...+|||-+... ...+-+..||.+.++|+|.|||+++|.|.+ .+-|.||-+|||||.
T Consensus 581 vVLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLS 660 (1226)
T KOG4279|consen 581 VVLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLS 660 (1226)
T ss_pred EEeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHH
Confidence 5679999999999998 4567999999833 334568899999999999999999999977 455899999999999
Q ss_pred HHHhhccccccccccCCCC--CHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccC-CCccEEEEeCCCccc---
Q 003594 542 DKLFTSQRNYKNCSRARAL--RWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLD-RNLVAKISGLGLNIC--- 615 (808)
Q Consensus 542 ~~l~~~~~~~~~~~~~~~l--~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld-~~~~~kl~DfGla~~--- 615 (808)
++|... -+++ .+.+.-.+..||+.||.|||.+. |||||||-+|+|++ -.|.+||+|||.++.
T Consensus 661 sLLrsk---------WGPlKDNEstm~fYtkQILeGLkYLHen~---IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAg 728 (1226)
T KOG4279|consen 661 SLLRSK---------WGPLKDNESTMNFYTKQILEGLKYLHENK---IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAG 728 (1226)
T ss_pred HHHHhc---------cCCCccchhHHHHHHHHHHHHhhhhhhcc---eeeccccCCcEEEeeccceEEecccccchhhcc
Confidence 999643 3555 77888889999999999999955 99999999999996 579999999999864
Q ss_pred ------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHH-hccCCCCCChhh
Q 003594 616 ------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQV-LDGNAGIWPLDL 670 (808)
Q Consensus 616 ------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~-ld~~~~~~p~~~ 670 (808)
.+|++.+|||||||++.||.||+|||...... +..+..+ .-..-+++|...
T Consensus 729 inP~TETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgsp----qAAMFkVGmyKvHP~iPeel 804 (1226)
T KOG4279|consen 729 INPCTETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSP----QAAMFKVGMYKVHPPIPEEL 804 (1226)
T ss_pred CCccccccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCCh----hHhhhhhcceecCCCCcHHH
Confidence 36899999999999999999999999643211 1111111 122457789999
Q ss_pred HHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 671 AEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 671 ~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
+.+..++|++|+.+| |..||++.+++.
T Consensus 805 saeak~FilrcFepd--~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 805 SAEAKNFILRCFEPD--PCDRPSAKDLLQ 831 (1226)
T ss_pred HHHHHHHHHHHcCCC--cccCccHHHhcc
Confidence 999999999999999 999999999885
No 165
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=4e-32 Score=291.07 Aligned_cols=220 Identities=17% Similarity=0.296 Sum_probs=177.2
Q ss_pred ccccccccccccCCceEEEEEEE--CCeEEEEEEccCCC--CHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEee
Q 003594 461 EDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNGL--SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEY 534 (808)
Q Consensus 461 ~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~--~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey 534 (808)
++|.+..+.+|.|+||.||+|.+ ++..+++|.+.... ....+.+|+.+++.++||||++++++|.. ..++||||
T Consensus 4 ~~~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~ 83 (282)
T cd06643 4 EEFWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEF 83 (282)
T ss_pred HHHHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEe
Confidence 34455556688999999999998 46889999986332 24578899999999999999999998855 78999999
Q ss_pred cCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCcc
Q 003594 535 MPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNI 614 (808)
Q Consensus 535 ~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~ 614 (808)
+++|+|..++.. ...++++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||++.
T Consensus 84 ~~~~~l~~~~~~---------~~~~l~~~~~~~~~~qi~~~L~~LH~---~~i~H~dlkp~nili~~~~~~kl~dfg~~~ 151 (282)
T cd06643 84 CAGGAVDAVMLE---------LERPLTEPQIRVVCKQTLEALNYLHE---NKIIHRDLKAGNILFTLDGDIKLADFGVSA 151 (282)
T ss_pred cCCCcHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCcccEEEccCCCEEEccccccc
Confidence 999999998853 23569999999999999999999999 569999999999999999999999999873
Q ss_pred c------------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhcc--C
Q 003594 615 C------------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDG--N 662 (808)
Q Consensus 615 ~------------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~--~ 662 (808)
. ..++.++|||||||++|+|++|++||..... ......+... .
T Consensus 152 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~-----~~~~~~~~~~~~~ 226 (282)
T cd06643 152 KNTRTIQRRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNP-----MRVLLKIAKSEPP 226 (282)
T ss_pred cccccccccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCH-----HHHHHHHhhcCCC
Confidence 2 1134689999999999999999999865321 1112222221 1
Q ss_pred CCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 663 AGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 663 ~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
....|..++..+.+|+.+||+.+ |..||++.+++.
T Consensus 227 ~~~~~~~~~~~~~~li~~~l~~~--p~~Rp~~~~il~ 261 (282)
T cd06643 227 TLAQPSRWSSEFKDFLKKCLEKN--VDARWTTTQLLQ 261 (282)
T ss_pred CCCCccccCHHHHHHHHHHccCC--hhhCcCHHHHhc
Confidence 22234557789999999999999 999999888764
No 166
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=3.8e-32 Score=288.26 Aligned_cols=224 Identities=20% Similarity=0.285 Sum_probs=179.9
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCC--C---CHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCC
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNG--L---SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNG 538 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~--~---~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~g 538 (808)
+.+|.|+||.||+|.. ++..||||.+... . ....+.+|+.+++.++||||++++++|.+ ..++||||++++
T Consensus 8 ~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~ 87 (267)
T cd08229 8 KKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAG 87 (267)
T ss_pred hhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEEEecCCC
Confidence 5678999999999997 6899999987621 1 23578899999999999999999999855 789999999999
Q ss_pred CHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc---
Q 003594 539 NLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC--- 615 (808)
Q Consensus 539 sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~--- 615 (808)
+|.+++.... .....+++..++.++.||+.||.|||+ .+++|+||||+||+++.++.++|+|||++..
T Consensus 88 ~L~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 88 DLSRMIKHFK------KQKRLIPEKTVWKYFVQLCSALEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred CHHHHHHHhh------ccCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 9999986431 234568999999999999999999999 5699999999999999999999999997632
Q ss_pred ----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCC-ChhhHH
Q 003594 616 ----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIW-PLDLAE 672 (808)
Q Consensus 616 ----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~-p~~~~~ 672 (808)
..++.++||||||+++|+|++|..||...... .......+.....+.. +...+.
T Consensus 159 ~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 235 (267)
T cd08229 159 KTTAAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---LYSLCKKIEQCDYPPLPSDHYSE 235 (267)
T ss_pred CCcccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch---HHHHhhhhhcCCCCCCCcccccH
Confidence 23567899999999999999999998532110 0111112222222222 235778
Q ss_pred HHHHHHHHhhccCCCcCccccHHhhHHHHHHHH
Q 003594 673 ELAGIALKCLSADQDANRDLRIAGVMKELDEVR 705 (808)
Q Consensus 673 ~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~ 705 (808)
.+.+++.+||..+ |..|||+.+|++.++++.
T Consensus 236 ~~~~li~~~l~~~--p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 236 ELRQLVNMCINPD--PEKRPDITYVYDVAKRMH 266 (267)
T ss_pred HHHHHHHHhcCCC--cccCCCHHHHHHHHhhhc
Confidence 9999999999999 999999999999998763
No 167
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=7.1e-32 Score=290.05 Aligned_cols=231 Identities=25% Similarity=0.414 Sum_probs=183.5
Q ss_pred ccccccccccccCCceEEEEEEE-------CCeEEEEEEccCCCC---HHHHHHHHHHHhccCCCCccceeecccc--ce
Q 003594 461 EDFSERFRLKCAGDWTNVYRGRL-------NHASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LK 528 (808)
Q Consensus 461 ~~f~~~~~i~g~G~~g~Vy~~~~-------~~~~vAiK~l~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~ 528 (808)
++|.... .+|.|+||.||++.+ ++..||+|.+..... ...|.+|+.++++++||||++++++|.+ ..
T Consensus 5 ~~~~~~~-~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 5 NNIEYVR-DIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred Hhceecc-cccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 4555544 457899999999986 357899999874333 3568899999999999999999999866 78
Q ss_pred EEEEeecCCCCHHHHHhhccccccc------------cccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCC
Q 003594 529 CIVFEYMPNGNLRDKLFTSQRNYKN------------CSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSS 596 (808)
Q Consensus 529 ~lV~Ey~~~gsL~~~l~~~~~~~~~------------~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~N 596 (808)
++||||+++|+|.+++......... ......+++..++.++.||+.||.|||+ .+++||||||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~---~~i~H~dl~p~n 160 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSE---RKFVHRDLATRN 160 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHh---CCeecccccHhh
Confidence 9999999999999999643211000 0122458999999999999999999999 569999999999
Q ss_pred cccCCCccEEEEeCCCccc---------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHh
Q 003594 597 ILLDRNLVAKISGLGLNIC---------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAM 648 (808)
Q Consensus 597 ILld~~~~~kl~DfGla~~---------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~ 648 (808)
||++.++.++|+|||++.. ..++.++|||||||++|+|++ |..||.....
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~-- 238 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH-- 238 (288)
T ss_pred eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH--
Confidence 9999999999999998742 235678999999999999998 8878753211
Q ss_pred hhcHHHHHHHhccCCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHH
Q 003594 649 ALDQTTLMQVLDGNAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELD 702 (808)
Q Consensus 649 ~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~ 702 (808)
......+.+......|...+..+.+|+.+||+.+ |..||++.++++.|+
T Consensus 239 ---~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~--p~~Rpt~~el~~~l~ 287 (288)
T cd05050 239 ---EEVIYYVRDGNVLSCPDNCPLELYNLMRLCWSKL--PSDRPSFASINRILQ 287 (288)
T ss_pred ---HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHcccC--cccCCCHHHHHHHhh
Confidence 1223333344444456677889999999999999 999999999999886
No 168
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=3.6e-32 Score=289.26 Aligned_cols=223 Identities=19% Similarity=0.318 Sum_probs=177.9
Q ss_pred HhhccccccccccccCCceEEEEEEE--CCeEEEEEEcc-CCCCHHHHHHHHHHHhcc-CCCCccceeecccc-------
Q 003594 458 LATEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLN-NGLSEEDFQAKVSFLTAV-RHPHLVAVMGCCSE------- 526 (808)
Q Consensus 458 ~at~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~-~~~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~------- 526 (808)
.+++.|... +.+|.|+||.||+|.+ +++.||+|++. .......+.+|+.++.++ +||||++++++|..
T Consensus 3 ~~~~~y~~~-~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 3 DPAGIFELV-ELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred ChhhhhhHH-HheeecCCeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 345566554 4567899999999998 57899999987 334456789999999999 79999999999842
Q ss_pred -ceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccE
Q 003594 527 -LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVA 605 (808)
Q Consensus 527 -~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~ 605 (808)
..|+||||+++|+|.+++... ....++|..+..++.|++.||.|||+ .+|+||||||+||+++.++.+
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~--------~~~~l~~~~~~~~~~qi~~~l~~LH~---~~ivh~dl~~~nili~~~~~~ 150 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNT--------KGNTLKEEWIAYICREILRGLSHLHQ---HKVIHRDIKGQNVLLTENAEV 150 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhc--------cCCCCCHHHHHHHHHHHHHHHHHHHH---CCCccCCCCHHHEEECCCCCE
Confidence 478999999999999999542 23568999999999999999999999 569999999999999999999
Q ss_pred EEEeCCCccc------------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHH
Q 003594 606 KISGLGLNIC------------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTL 655 (808)
Q Consensus 606 kl~DfGla~~------------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~ 655 (808)
||+|||++.. ..++.++|||||||++|+|++|.+||...... ...
T Consensus 151 ~l~Dfg~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~-----~~~ 225 (272)
T cd06637 151 KLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM-----RAL 225 (272)
T ss_pred EEccCCCceecccccccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHH-----HHH
Confidence 9999999742 12556899999999999999999998643221 111
Q ss_pred HHHh-ccCCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 656 MQVL-DGNAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 656 ~~~l-d~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
.... .......+..++..+.+|+.+||..+ |..||++.++++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~--p~~Rpt~~~il~ 268 (272)
T cd06637 226 FLIPRNPAPRLKSKKWSKKFQSFIESCLVKN--HSQRPTTEQLMK 268 (272)
T ss_pred HHHhcCCCCCCCCCCcCHHHHHHHHHHcCCC--hhhCCCHHHHhh
Confidence 1111 11222223356788999999999999 999999998875
No 169
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=6.5e-32 Score=293.06 Aligned_cols=225 Identities=21% Similarity=0.343 Sum_probs=180.7
Q ss_pred ccccccccccccCCceEEEEEEE-------CCeEEEEEEccCCCC---HHHHHHHHHHHhcc-CCCCccceeecccc--c
Q 003594 461 EDFSERFRLKCAGDWTNVYRGRL-------NHASVAIKTLNNGLS---EEDFQAKVSFLTAV-RHPHLVAVMGCCSE--L 527 (808)
Q Consensus 461 ~~f~~~~~i~g~G~~g~Vy~~~~-------~~~~vAiK~l~~~~~---~~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~ 527 (808)
++|... +.+|.|+||.||++.+ .+..||||++..... .+.+.+|+.+++++ +||||++++++|.. .
T Consensus 35 ~~~~~~-~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 113 (302)
T cd05055 35 NNLSFG-KTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP 113 (302)
T ss_pred HHeEEc-ceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence 455543 4567899999999975 235799999874322 35688999999999 79999999999865 7
Q ss_pred eEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEE
Q 003594 528 KCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKI 607 (808)
Q Consensus 528 ~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl 607 (808)
.++||||+++|+|.+++... ....+++.++..|+.||+.||.|||+ .+|+|+||||+|||++.++.+||
T Consensus 114 ~~lv~e~~~~~~L~~~i~~~--------~~~~l~~~~~~~i~~~i~~~l~~lH~---~~ivH~dlkp~Nil~~~~~~~~l 182 (302)
T cd05055 114 ILVITEYCCYGDLLNFLRRK--------RESFLTLEDLLSFSYQVAKGMAFLAS---KNCIHRDLAARNVLLTHGKIVKI 182 (302)
T ss_pred eEEEEEcCCCCcHHHHHHhC--------CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeehhhhccceEEEcCCCeEEE
Confidence 89999999999999999532 22348999999999999999999999 56999999999999999999999
Q ss_pred EeCCCccc---------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHh
Q 003594 608 SGLGLNIC---------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVL 659 (808)
Q Consensus 608 ~DfGla~~---------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~l 659 (808)
+|||++.. ..++.++|||||||++|+|++ |.+||..... ...+...+
T Consensus 183 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~-----~~~~~~~~ 257 (302)
T cd05055 183 CDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPV-----DSKFYKLI 257 (302)
T ss_pred CCCcccccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCc-----hHHHHHHH
Confidence 99998752 124678999999999999998 9999864321 11222222
Q ss_pred c-cCCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHH
Q 003594 660 D-GNAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEV 704 (808)
Q Consensus 660 d-~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l 704 (808)
. +.....+...+..+.+++.+||..+ |..||++.+++..|+.+
T Consensus 258 ~~~~~~~~~~~~~~~~~~li~~cl~~~--p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 258 KEGYRMAQPEHAPAEIYDIMKTCWDAD--PLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred HcCCcCCCCCCCCHHHHHHHHHHcCCC--chhCcCHHHHHHHHHhh
Confidence 2 2233344456789999999999999 99999999999999864
No 170
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1.6e-32 Score=305.70 Aligned_cols=212 Identities=18% Similarity=0.286 Sum_probs=171.3
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccCC-----CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNNG-----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPN 537 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~ 537 (808)
.+++|.|+||.||+|.. +|+.||||++... .....+.+|+.+|..++||||++++++|.+ ..||||||+++
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~ 85 (364)
T cd05599 6 IKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIMEYLPG 85 (364)
T ss_pred EEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEECCCCC
Confidence 46678999999999998 5789999999721 223567889999999999999999999865 78999999999
Q ss_pred CCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--
Q 003594 538 GNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-- 615 (808)
Q Consensus 538 gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-- 615 (808)
|+|.+++. ....+++..+..|+.||+.||.|||+ .+|+||||||+|||++.++.+||+|||++..
T Consensus 86 g~L~~~l~----------~~~~l~~~~~~~~~~qi~~aL~~lH~---~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~ 152 (364)
T cd05599 86 GDMMTLLM----------KKDTFTEEETRFYIAETILAIDSIHK---LGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLK 152 (364)
T ss_pred cHHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEeecccceecc
Confidence 99999994 34568999999999999999999999 5699999999999999999999999998631
Q ss_pred -------------------------------------------------------------CCCCcchhhHhHHHHHHHH
Q 003594 616 -------------------------------------------------------------DQLNVRSDIRAFGTLLLHL 634 (808)
Q Consensus 616 -------------------------------------------------------------~~~t~ksDVwS~Gvil~el 634 (808)
..++.++|||||||++|+|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el 232 (364)
T cd05599 153 KSHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEM 232 (364)
T ss_pred ccccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHh
Confidence 2357789999999999999
Q ss_pred HcCCCCchhhHHHhhhcHHHHHHHhccC-CCCCC--hhhHHHHHHHHHHhhccCCCcCcccc---HHhhHH
Q 003594 635 LTGRNWAGLVEKAMALDQTTLMQVLDGN-AGIWP--LDLAEELAGIALKCLSADQDANRDLR---IAGVMK 699 (808)
Q Consensus 635 ltG~~P~~~~~~~~~~~~~~~~~~ld~~-~~~~p--~~~~~~l~~Li~~Cl~~dp~p~~Rps---~~evl~ 699 (808)
++|.+||..... ......++... ....| ...++.+.+|+.+|+. + |..|++ +.+++.
T Consensus 233 ~~G~~Pf~~~~~-----~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~ll~-~--p~~R~~~~~~~~ll~ 295 (364)
T cd05599 233 LVGYPPFCSDNP-----QETYRKIINWKETLQFPDEVPLSPEAKDLIKRLCC-E--AERRLGNNGVNEIKS 295 (364)
T ss_pred hcCCCCCCCCCH-----HHHHHHHHcCCCccCCCCCCCCCHHHHHHHHHHcc-C--HhhcCCCCCHHHHhc
Confidence 999999975322 12222232211 11222 2457899999999996 7 778887 777764
No 171
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=99.98 E-value=4e-32 Score=290.30 Aligned_cols=215 Identities=20% Similarity=0.295 Sum_probs=176.8
Q ss_pred ccccccccCCceEEEEEEE--CCeEEEEEEccCCC---CHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCC
Q 003594 465 ERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNGL---SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPN 537 (808)
Q Consensus 465 ~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~---~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~ 537 (808)
...+.+|.|+||.||+|.+ ++..||+|.+.... ..+.+.+|+.++++++||||++++++|.. ..++||||+++
T Consensus 7 ~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 86 (277)
T cd06642 7 TKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYLGG 86 (277)
T ss_pred HHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEccCC
Confidence 3345678999999999987 57899999987322 23578899999999999999999999865 78999999999
Q ss_pred CCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--
Q 003594 538 GNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-- 615 (808)
Q Consensus 538 gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-- 615 (808)
++|.+++. ...+++..+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++..
T Consensus 87 ~~L~~~~~-----------~~~~~~~~~~~~~~~i~~~l~~lH~---~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~ 152 (277)
T cd06642 87 GSALDLLK-----------PGPLEETYIATILREILKGLDYLHS---ERKIHRDIKAANVLLSEQGDVKLADFGVAGQLT 152 (277)
T ss_pred CcHHHHhh-----------cCCCCHHHHHHHHHHHHHHHHHHhc---CCeeccCCChheEEEeCCCCEEEcccccccccc
Confidence 99999883 2458999999999999999999999 6699999999999999999999999998742
Q ss_pred -----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHH
Q 003594 616 -----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAE 672 (808)
Q Consensus 616 -----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~ 672 (808)
..++.++|||||||++|+|+||++||..... ......+........+...+.
T Consensus 153 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 227 (277)
T cd06642 153 DTQIKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHP-----MRVLFLIPKNSPPTLEGQYSK 227 (277)
T ss_pred CcchhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccch-----hhHHhhhhcCCCCCCCcccCH
Confidence 2356789999999999999999999864221 111122222233344556778
Q ss_pred HHHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 673 ELAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 673 ~l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
.+.+++.+||..+ |..||++.+++..
T Consensus 228 ~~~~li~~~l~~~--p~~Rp~~~~il~~ 253 (277)
T cd06642 228 PFKEFVEACLNKD--PRFRPTAKELLKH 253 (277)
T ss_pred HHHHHHHHHccCC--cccCcCHHHHHHh
Confidence 9999999999999 9999999999974
No 172
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.98 E-value=4.4e-32 Score=303.18 Aligned_cols=226 Identities=19% Similarity=0.272 Sum_probs=177.5
Q ss_pred HHHhhccccccccccccCCceEEEEEEE--CCeEEEEEEccC-----CCCHHHHHHHHHHHhccCCCCccceeecccc--
Q 003594 456 IRLATEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN-----GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE-- 526 (808)
Q Consensus 456 i~~at~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~-----~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-- 526 (808)
+....++|... +.+|+|+||.||++.. +++.||+|++.. ......+.+|+.++..++||||+++++++.+
T Consensus 38 ~~~~~~~y~i~-~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~ 116 (371)
T cd05622 38 LRMKAEDYEVV-KVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDR 116 (371)
T ss_pred cCcchhhcEEE-EEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCC
Confidence 34445666654 5568899999999998 578999999862 1223567889999999999999999999865
Q ss_pred ceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEE
Q 003594 527 LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAK 606 (808)
Q Consensus 527 ~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~k 606 (808)
..|+||||++||+|.+++.. ..++...+..++.||+.||.|||+ .+|+||||||+|||++.++.+|
T Consensus 117 ~~~lv~Ey~~gg~L~~~~~~-----------~~~~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NIll~~~~~ik 182 (371)
T cd05622 117 YLYMVMEYMPGGDLVNLMSN-----------YDVPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLK 182 (371)
T ss_pred EEEEEEcCCCCCcHHHHHHh-----------cCCCHHHHHHHHHHHHHHHHHHHH---CCEEeCCCCHHHEEECCCCCEE
Confidence 68999999999999999842 247888899999999999999999 6699999999999999999999
Q ss_pred EEeCCCccc------------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHH
Q 003594 607 ISGLGLNIC------------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLM 656 (808)
Q Consensus 607 l~DfGla~~------------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~ 656 (808)
|+|||++.. ..++.++|||||||++|||++|++||..... ...+.
T Consensus 183 L~DfG~a~~~~~~~~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~-----~~~~~ 257 (371)
T cd05622 183 LADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL-----VGTYS 257 (371)
T ss_pred EEeCCceeEcCcCCcccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCH-----HHHHH
Confidence 999998742 0156799999999999999999999975321 22333
Q ss_pred HHhcc-CCCCCC--hhhHHHHHHHHHHhhccCCCcCccccHHhhHHHH
Q 003594 657 QVLDG-NAGIWP--LDLAEELAGIALKCLSADQDANRDLRIAGVMKEL 701 (808)
Q Consensus 657 ~~ld~-~~~~~p--~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L 701 (808)
.+... ....+| ..++..+.+++.+||..++.+..|+++.++++..
T Consensus 258 ~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 258 KIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred HHHcCCCcccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 34332 122233 3578899999999998443223478888887653
No 173
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.98 E-value=6.1e-32 Score=285.83 Aligned_cols=219 Identities=18% Similarity=0.296 Sum_probs=178.5
Q ss_pred cccccccccccCCceEEEEEEE--CCeEEEEEEccCCC-------CHHHHHHHHHHHhccCCCCccceeecccc--ceEE
Q 003594 462 DFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNGL-------SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCI 530 (808)
Q Consensus 462 ~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~-------~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~l 530 (808)
+|.. .+.+|.|+||.||+|.. ++..||+|.+.... ....+.+|+.++++++||||+++++++.+ ..++
T Consensus 3 ~~~~-~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 3 NWRR-GKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred cccc-cceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 4544 35667899999999987 57999999986221 12468889999999999999999999865 7899
Q ss_pred EEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeC
Q 003594 531 VFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGL 610 (808)
Q Consensus 531 V~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~Df 610 (808)
||||+++++|.+++. ....+++..+..++.|++.||.|||+ .+|+||||+|+||+++.++.++|+||
T Consensus 82 v~e~~~~~~l~~~~~----------~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nilv~~~~~~~l~df 148 (263)
T cd06625 82 FMEYMPGGSVKDQLK----------AYGALTETVTRKYTRQILEGVEYLHS---NMIVHRDIKGANILRDSAGNVKLGDF 148 (263)
T ss_pred EEEECCCCcHHHHHH----------HhCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeec
Confidence 999999999999994 34568999999999999999999999 56999999999999999999999999
Q ss_pred CCccc----------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccC
Q 003594 611 GLNIC----------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGN 662 (808)
Q Consensus 611 Gla~~----------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~ 662 (808)
|++.. ..++.++||||||+++|+|++|++||...... ...........
T Consensus 149 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~----~~~~~~~~~~~ 224 (263)
T cd06625 149 GASKRLQTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAM----AAIFKIATQPT 224 (263)
T ss_pred ccceeccccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchH----HHHHHHhccCC
Confidence 98742 12467899999999999999999998643211 11111122223
Q ss_pred CCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 663 AGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 663 ~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
....|..++..+.+++.+||..+ |..||++.+++..
T Consensus 225 ~~~~~~~~~~~~~~li~~~l~~~--p~~Rpt~~~ll~~ 260 (263)
T cd06625 225 NPQLPSHVSPDARNFLRRTFVEN--AKKRPSAEELLRH 260 (263)
T ss_pred CCCCCccCCHHHHHHHHHHhhcC--cccCCCHHHHhhC
Confidence 44566778899999999999999 9999999998763
No 174
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.98 E-value=2.5e-32 Score=305.00 Aligned_cols=221 Identities=19% Similarity=0.241 Sum_probs=176.3
Q ss_pred hccccccccccccCCceEEEEEEE--CCeEEEEEEccC-----CCCHHHHHHHHHHHhccCCCCccceeecccc--ceEE
Q 003594 460 TEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN-----GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCI 530 (808)
Q Consensus 460 t~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~-----~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~l 530 (808)
.++|... +.+|.|+||.||++.. ++..||+|++.. ......+.+|+.+++.++||||+++++++.+ ..|+
T Consensus 42 ~~~y~~~-~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 42 AEDFDVI-KVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred HHHcEEE-EEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 4455543 5668999999999998 578999999862 1233557899999999999999999998865 6899
Q ss_pred EEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeC
Q 003594 531 VFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGL 610 (808)
Q Consensus 531 V~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~Df 610 (808)
||||++||+|.+++.. ..+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+||
T Consensus 121 v~Ey~~gg~L~~~l~~-----------~~l~~~~~~~~~~qi~~aL~~LH~---~~ivHrDLkp~NILl~~~~~~kL~Df 186 (370)
T cd05596 121 VMEYMPGGDLVNLMSN-----------YDIPEKWARFYTAEVVLALDAIHS---MGFIHRDVKPDNMLLDKSGHLKLADF 186 (370)
T ss_pred EEcCCCCCcHHHHHHh-----------cCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEEcCCCCEEEEec
Confidence 9999999999999842 247888899999999999999999 56999999999999999999999999
Q ss_pred CCccc------------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhc
Q 003594 611 GLNIC------------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLD 660 (808)
Q Consensus 611 Gla~~------------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld 660 (808)
|++.. ..++.++|||||||++|||++|++||..... ...+..+..
T Consensus 187 G~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~-----~~~~~~i~~ 261 (370)
T cd05596 187 GTCMKMDANGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL-----VGTYSKIMD 261 (370)
T ss_pred cceeeccCCCcccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCH-----HHHHHHHHc
Confidence 98732 0256789999999999999999999975321 223344443
Q ss_pred c-CCCCCCh--hhHHHHHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 661 G-NAGIWPL--DLAEELAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 661 ~-~~~~~p~--~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
. ....+|. .++..+.+|+.+||..+|....|+++.+++..
T Consensus 262 ~~~~~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 262 HKNSLTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred CCCcCCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 2 1223343 46899999999999988433339999988754
No 175
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.98 E-value=4.3e-32 Score=288.21 Aligned_cols=221 Identities=23% Similarity=0.403 Sum_probs=178.8
Q ss_pred ccccCCceEEEEEEECC--------eEEEEEEccCC---CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeec
Q 003594 469 LKCAGDWTNVYRGRLNH--------ASVAIKTLNNG---LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYM 535 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~~~--------~~vAiK~l~~~---~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~ 535 (808)
++|.|+||.||+|.+.+ ..||||.+... .....|.+|+.+++.++||||++++++|.. ..++||||+
T Consensus 2 ~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 81 (269)
T cd05044 2 FLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMELM 81 (269)
T ss_pred ccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEecc
Confidence 57899999999998732 57999988733 235678999999999999999999999865 789999999
Q ss_pred CCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCc-----cEEEEeC
Q 003594 536 PNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNL-----VAKISGL 610 (808)
Q Consensus 536 ~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~-----~~kl~Df 610 (808)
++|+|.+++....... .....++|..++.++.|++.||.|||+ .+++|+||||+|||++.++ .++|+||
T Consensus 82 ~~~~L~~~l~~~~~~~---~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~~~~~~l~df 155 (269)
T cd05044 82 EGGDLLSYLRDARVER---FGPPLLTLKELLDICLDVAKGCVYLEQ---MHFIHRDLAARNCLVSEKGYDADRVVKIGDF 155 (269)
T ss_pred CCCcHHHHHHHhhhcc---cCCccccHHHHHHHHHHHHHHHHHHHh---CCcccCCCChheEEEecCCCCCCcceEECCc
Confidence 9999999996532110 123458999999999999999999999 5699999999999999877 8999999
Q ss_pred CCccc---------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccC
Q 003594 611 GLNIC---------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGN 662 (808)
Q Consensus 611 Gla~~---------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~ 662 (808)
|++.. ..++.++|||||||++|+|+| |..||..... ......+....
T Consensus 156 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~-----~~~~~~~~~~~ 230 (269)
T cd05044 156 GLARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNN-----QEVLQHVTAGG 230 (269)
T ss_pred ccccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCH-----HHHHHHHhcCC
Confidence 98742 245778999999999999998 9999864221 11222222233
Q ss_pred CCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHH
Q 003594 663 AGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELD 702 (808)
Q Consensus 663 ~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~ 702 (808)
....+...+..+.+++.+||..+ |..||++.+|++.|+
T Consensus 231 ~~~~~~~~~~~~~~li~~~l~~~--p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 231 RLQKPENCPDKIYQLMTNCWAQD--PSERPTFDRIQEILQ 268 (269)
T ss_pred ccCCcccchHHHHHHHHHHcCCC--cccCCCHHHHHHHHh
Confidence 34455678899999999999999 999999999999886
No 176
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.98 E-value=7.3e-32 Score=285.54 Aligned_cols=219 Identities=25% Similarity=0.416 Sum_probs=179.4
Q ss_pred ccccccCCceEEEEEEE-CCeEEEEEEccCC-CCHHHHHHHHHHHhccCCCCccceeecccc-ceEEEEeecCCCCHHHH
Q 003594 467 FRLKCAGDWTNVYRGRL-NHASVAIKTLNNG-LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE-LKCIVFEYMPNGNLRDK 543 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~-~~~~vAiK~l~~~-~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-~~~lV~Ey~~~gsL~~~ 543 (808)
.+.+|+|+||.||++.+ ++..||+|.+... .....|.+|+.++++++|+||+++++++.+ ..++||||+++|+|.++
T Consensus 11 ~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~v~e~~~~~~L~~~ 90 (260)
T cd05073 11 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPIYIITEFMAKGSLLDF 90 (260)
T ss_pred EeEecCccceEEEEEEecCCccEEEEecCCChhHHHHHHHHHHHHHhcCCCCcceEEEEEcCCCeEEEEEeCCCCcHHHH
Confidence 35568899999999987 4578999998743 235679999999999999999999999866 67899999999999999
Q ss_pred HhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--------
Q 003594 544 LFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-------- 615 (808)
Q Consensus 544 l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-------- 615 (808)
+... ....+++..+..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||++..
T Consensus 91 ~~~~--------~~~~~~~~~~~~~~~~l~~aL~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~ 159 (260)
T cd05073 91 LKSD--------EGSKQPLPKLIDFSAQIAEGMAFIEQ---RNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTA 159 (260)
T ss_pred HHhC--------CccccCHHHHHHHHHHHHHHHHHHHh---CCccccccCcceEEEcCCCcEEECCCcceeeccCCCccc
Confidence 9542 23568999999999999999999999 5699999999999999999999999997642
Q ss_pred ------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHHHHH
Q 003594 616 ------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAG 676 (808)
Q Consensus 616 ------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~ 676 (808)
..++.++|||||||++|+++| |++||..... ......+........+...+..+.+
T Consensus 160 ~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (260)
T cd05073 160 REGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN-----PEVIRALERGYRMPRPENCPEELYN 234 (260)
T ss_pred ccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCH-----HHHHHHHhCCCCCCCcccCCHHHHH
Confidence 124668999999999999999 9999864221 1112222222233344567789999
Q ss_pred HHHHhhccCCCcCccccHHhhHHHHHH
Q 003594 677 IALKCLSADQDANRDLRIAGVMKELDE 703 (808)
Q Consensus 677 Li~~Cl~~dp~p~~Rps~~evl~~L~~ 703 (808)
++.+||..+ |+.||++.+++..|+.
T Consensus 235 ~i~~~l~~~--p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 235 IMMRCWKNR--PEERPTFEYIQSVLDD 259 (260)
T ss_pred HHHHHcccC--cccCcCHHHHHHHHhc
Confidence 999999999 9999999999999874
No 177
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.98 E-value=9.7e-32 Score=287.61 Aligned_cols=222 Identities=21% Similarity=0.338 Sum_probs=183.1
Q ss_pred ccccccCCceEEEEEEE--CC----eEEEEEEccCCCC---HHHHHHHHHHHhccCCCCccceeecccc-ceEEEEeecC
Q 003594 467 FRLKCAGDWTNVYRGRL--NH----ASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE-LKCIVFEYMP 536 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~----~~vAiK~l~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~-~~~lV~Ey~~ 536 (808)
.+.+|.|+||.||+|.+ +| ..||+|.+..... ...+.+|+.++.+++||||++++++|.. ..++||||++
T Consensus 12 ~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~v~e~~~ 91 (279)
T cd05057 12 IKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLSSQVQLITQLMP 91 (279)
T ss_pred cceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCceEEEEecCC
Confidence 35678999999999987 33 3699999874433 3578899999999999999999999865 7899999999
Q ss_pred CCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-
Q 003594 537 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC- 615 (808)
Q Consensus 537 ~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~- 615 (808)
+|+|.+++.. ....+++..++.++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 92 ~g~L~~~l~~---------~~~~~~~~~~~~~~~qi~~~l~~LH~---~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~ 159 (279)
T cd05057 92 LGCLLDYVRN---------HKDNIGSQYLLNWCVQIAKGMSYLEE---KRLVHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (279)
T ss_pred CCcHHHHHHh---------ccCCCCHHHHHHHHHHHHHHHHHHHh---CCEEecccCcceEEEcCCCeEEECCCcccccc
Confidence 9999999953 23458999999999999999999999 5699999999999999999999999998742
Q ss_pred --------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCCCCCCh
Q 003594 616 --------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNAGIWPL 668 (808)
Q Consensus 616 --------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~ 668 (808)
..++.++||||||+++|||++ |++||..... ......+........|.
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~ 234 (279)
T cd05057 160 DVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA-----VEIPDLLEKGERLPQPP 234 (279)
T ss_pred cCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH-----HHHHHHHhCCCCCCCCC
Confidence 234678999999999999999 9999865321 11222333333344455
Q ss_pred hhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHHHHh
Q 003594 669 DLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVRKK 707 (808)
Q Consensus 669 ~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~~~ 707 (808)
.++..+.+++.+||..+ |..||++.+++..|..+.+.
T Consensus 235 ~~~~~~~~~~~~~l~~~--p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 235 ICTIDVYMVLVKCWMID--AESRPTFKELINEFSKMARD 271 (279)
T ss_pred CCCHHHHHHHHHHcCCC--hhhCCCHHHHHHHHHHHHhC
Confidence 67789999999999999 99999999999999988653
No 178
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.98 E-value=1e-31 Score=283.31 Aligned_cols=216 Identities=22% Similarity=0.319 Sum_probs=176.8
Q ss_pred ccccCCceEEEEEEEC---C--eEEEEEEccCCCC---HHHHHHHHHHHhccCCCCccceeecccc-ceEEEEeecCCCC
Q 003594 469 LKCAGDWTNVYRGRLN---H--ASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE-LKCIVFEYMPNGN 539 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~~---~--~~vAiK~l~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~-~~~lV~Ey~~~gs 539 (808)
.+|.|+||.||+|.+. + ..||||.+..... .+.|.+|+.++++++||||+++++++.+ ..++||||+++|+
T Consensus 2 ~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~v~e~~~~~~ 81 (257)
T cd05040 2 KLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLTHPLMMVTELAPLGS 81 (257)
T ss_pred cCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcCCeEEEEEEecCCCc
Confidence 4688999999999972 2 3699999984333 4678999999999999999999998866 7789999999999
Q ss_pred HHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc----
Q 003594 540 LRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC---- 615 (808)
Q Consensus 540 L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~---- 615 (808)
|.+++... .. ..++|..++.++.|++.||.|||+ .+++||||||+||+++.++.+||+|||++..
T Consensus 82 L~~~l~~~-------~~-~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~ 150 (257)
T cd05040 82 LLDRLRKD-------AL-GHFLISTLCDYAVQIANGMRYLES---KRFIHRDLAARNILLASDDKVKIGDFGLMRALPQN 150 (257)
T ss_pred HHHHHHhc-------cc-ccCcHHHHHHHHHHHHHHHHHHHh---CCccccccCcccEEEecCCEEEecccccccccccc
Confidence 99999643 11 568999999999999999999999 5699999999999999999999999998642
Q ss_pred ------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHh-ccCCCCCChh
Q 003594 616 ------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVL-DGNAGIWPLD 669 (808)
Q Consensus 616 ------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~l-d~~~~~~p~~ 669 (808)
..++.++|||||||++|+|++ |.+||...... .....+. .......+..
T Consensus 151 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~ 225 (257)
T cd05040 151 EDHYVMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS-----QILKKIDKEGERLERPEA 225 (257)
T ss_pred ccceecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH-----HHHHHHHhcCCcCCCCcc
Confidence 235678999999999999998 99998543211 1111111 2223334556
Q ss_pred hHHHHHHHHHHhhccCCCcCccccHHhhHHHHH
Q 003594 670 LAEELAGIALKCLSADQDANRDLRIAGVMKELD 702 (808)
Q Consensus 670 ~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~ 702 (808)
.+..+.+++.+||..+ |..||++.+++..|.
T Consensus 226 ~~~~~~~li~~~l~~~--p~~Rps~~~~~~~l~ 256 (257)
T cd05040 226 CPQDIYNVMLQCWAHN--PADRPTFAALREFLP 256 (257)
T ss_pred CCHHHHHHHHHHCCCC--cccCCCHHHHHHHhc
Confidence 7789999999999999 999999999998874
No 179
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.98 E-value=8.9e-32 Score=293.50 Aligned_cols=230 Identities=22% Similarity=0.361 Sum_probs=183.9
Q ss_pred cccccCCceEEEEEEE---------CCeEEEEEEccCCCC---HHHHHHHHHHHhcc-CCCCccceeecccc--ceEEEE
Q 003594 468 RLKCAGDWTNVYRGRL---------NHASVAIKTLNNGLS---EEDFQAKVSFLTAV-RHPHLVAVMGCCSE--LKCIVF 532 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~---------~~~~vAiK~l~~~~~---~~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~~~lV~ 532 (808)
+.+|.|+||.||++.. ....||+|.+..... ...+..|+.++.++ +||||++++++|.+ ..++||
T Consensus 18 ~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 97 (314)
T cd05099 18 KPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQEGPLYVIV 97 (314)
T ss_pred eeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccCCceEEEE
Confidence 5568899999999975 235799999884332 35688999999999 69999999999865 689999
Q ss_pred eecCCCCHHHHHhhcccccc------ccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEE
Q 003594 533 EYMPNGNLRDKLFTSQRNYK------NCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAK 606 (808)
Q Consensus 533 Ey~~~gsL~~~l~~~~~~~~------~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~k 606 (808)
||+++|+|.+++........ .......++|..+..|+.||+.||.|||+ .+|+||||||+|||++.++.+|
T Consensus 98 e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~---~gi~H~dlkp~Nill~~~~~~k 174 (314)
T cd05099 98 EYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLES---RRCIHRDLAARNVLVTEDNVMK 174 (314)
T ss_pred ecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHH---CCeeeccccceeEEEcCCCcEE
Confidence 99999999999965421000 00123568999999999999999999999 5699999999999999999999
Q ss_pred EEeCCCccc---------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHH
Q 003594 607 ISGLGLNIC---------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQV 658 (808)
Q Consensus 607 l~DfGla~~---------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ 658 (808)
|+|||+++. ..++.++|||||||++|+|++ |..||..... ...+..+
T Consensus 175 L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~-----~~~~~~~ 249 (314)
T cd05099 175 IADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV-----EELFKLL 249 (314)
T ss_pred EccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHH
Confidence 999999852 235678999999999999999 8888864321 1222233
Q ss_pred hccCCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHHHHh
Q 003594 659 LDGNAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVRKK 707 (808)
Q Consensus 659 ld~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~~~ 707 (808)
........+..++.++.+++.+||..+ |..||++.++++.|+.+...
T Consensus 250 ~~~~~~~~~~~~~~~l~~li~~cl~~~--p~~Rps~~~ll~~l~~~~~~ 296 (314)
T cd05099 250 REGHRMDKPSNCTHELYMLMRECWHAV--PTQRPTFKQLVEALDKVLAA 296 (314)
T ss_pred HcCCCCCCCCCCCHHHHHHHHHHcCCC--cccCcCHHHHHHHHHHHHHH
Confidence 333334556677889999999999999 99999999999999988754
No 180
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.98 E-value=1.1e-31 Score=282.88 Aligned_cols=215 Identities=24% Similarity=0.438 Sum_probs=177.6
Q ss_pred cccccCCceEEEEEEE-CCeEEEEEEccC-CCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCHHHH
Q 003594 468 RLKCAGDWTNVYRGRL-NHASVAIKTLNN-GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNLRDK 543 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~-~~~~vAiK~l~~-~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL~~~ 543 (808)
+.+|.|+||.||+|.+ ++..+|+|.+.. ......|.+|+.++++++||||+++++++.. ..++||||+++|+|.++
T Consensus 10 ~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L~~~ 89 (256)
T cd05112 10 QEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFMEHGCLSDY 89 (256)
T ss_pred eeecCcccceEEEEEEeCCCeEEEEECCCCCCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCCCCcHHHH
Confidence 4568899999999998 478999999873 3456789999999999999999999999865 78999999999999999
Q ss_pred HhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--------
Q 003594 544 LFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-------- 615 (808)
Q Consensus 544 l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-------- 615 (808)
+.. ....+++..+..++.+++.||.|||+ .+++||||||+||+++.++.+||+|||++..
T Consensus 90 ~~~---------~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~ 157 (256)
T cd05112 90 LRA---------QRGKFSQETLLGMCLDVCEGMAYLES---SNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTS 157 (256)
T ss_pred HHh---------CccCCCHHHHHHHHHHHHHHHHHHHH---CCccccccccceEEEcCCCeEEECCCcceeecccCcccc
Confidence 853 23468999999999999999999999 5699999999999999999999999998642
Q ss_pred ------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHHHHH
Q 003594 616 ------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAG 676 (808)
Q Consensus 616 ------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~ 676 (808)
..++.++||||||+++|+|++ |.+||..... ......+........|...+..+.+
T Consensus 158 ~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (256)
T cd05112 158 STGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN-----SEVVETINAGFRLYKPRLASQSVYE 232 (256)
T ss_pred cCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH-----HHHHHHHhCCCCCCCCCCCCHHHHH
Confidence 235668999999999999998 9999864211 1122222222222334456789999
Q ss_pred HHHHhhccCCCcCccccHHhhHHHH
Q 003594 677 IALKCLSADQDANRDLRIAGVMKEL 701 (808)
Q Consensus 677 Li~~Cl~~dp~p~~Rps~~evl~~L 701 (808)
|+.+||+.+ |..||++.++++.|
T Consensus 233 l~~~~l~~~--p~~Rp~~~~~l~~l 255 (256)
T cd05112 233 LMQHCWKER--PEDRPSFSLLLHQL 255 (256)
T ss_pred HHHHHcccC--hhhCCCHHHHHHhh
Confidence 999999999 89999999999876
No 181
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.98 E-value=1e-31 Score=286.03 Aligned_cols=216 Identities=20% Similarity=0.310 Sum_probs=169.1
Q ss_pred ccccCCceEEEEEEE-CC---eEEEEEEccCCC---CHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCC
Q 003594 469 LKCAGDWTNVYRGRL-NH---ASVAIKTLNNGL---SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGN 539 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~-~~---~~vAiK~l~~~~---~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gs 539 (808)
.+|+|+||.||+|.. ++ ..+++|.+.... ....|.+|+.+++.++||||++++++|.+ ..|+||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 468999999999986 32 356777776322 34679999999999999999999999975 7899999999999
Q ss_pred HHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc----
Q 003594 540 LRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC---- 615 (808)
Q Consensus 540 L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~---- 615 (808)
|.+++.... .....+++.....++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||++..
T Consensus 82 L~~~l~~~~------~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~ 152 (268)
T cd05086 82 LKSYLSQEQ------WHRRNSQLLLLQRMACEIAAGVTHMHK---HNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKE 152 (268)
T ss_pred HHHHHHhhh------cccccccHHHHHHHHHHHHHHHHHHHH---CCeeccCCccceEEEcCCccEEecccccccccCcc
Confidence 999996532 123456778888999999999999999 5699999999999999999999999998631
Q ss_pred ------------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhcc---
Q 003594 616 ------------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDG--- 661 (808)
Q Consensus 616 ------------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~--- 661 (808)
..++.++|||||||++|||++ |.+||..... ...+..++..
T Consensus 153 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~-----~~~~~~~~~~~~~ 227 (268)
T cd05086 153 DYIETEDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD-----REVLNHVIKDQQV 227 (268)
T ss_pred hhhhcccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH-----HHHHHHHHhhccc
Confidence 012568999999999999997 5678754221 1111222111
Q ss_pred --CCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHH
Q 003594 662 --NAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKEL 701 (808)
Q Consensus 662 --~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L 701 (808)
..+.++...+..+.+++..|| .+ |..||++.+|++.|
T Consensus 228 ~~~~~~~~~~~~~~~~~l~~~c~-~~--P~~Rp~~~~i~~~l 266 (268)
T cd05086 228 KLFKPQLELPYSERWYEVLQFCW-LS--PEKRATAEEVHRLL 266 (268)
T ss_pred ccCCCccCCCCcHHHHHHHHHHh-hC--cccCCCHHHHHHHh
Confidence 223344457788999999999 67 89999999998876
No 182
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.98 E-value=4.6e-32 Score=324.18 Aligned_cols=225 Identities=16% Similarity=0.253 Sum_probs=175.9
Q ss_pred ccccccccccccCCceEEEEEEE--CCeEEEEEEccCC----CCHHHHHHHHHHHhccCCCCccceeecccc----ceEE
Q 003594 461 EDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNG----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE----LKCI 530 (808)
Q Consensus 461 ~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~----~~~l 530 (808)
++|.. ...+|.|+||.||++.+ .+..||+|.+... .....|..|+.+|.+|+|||||+++++|.+ .+||
T Consensus 13 ~~YeI-l~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~lyI 91 (1021)
T PTZ00266 13 NEYEV-IKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQKLYI 91 (1021)
T ss_pred CCEEE-EEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCEEEE
Confidence 44543 45678999999999998 5688999998722 123578899999999999999999998743 5799
Q ss_pred EEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCC----CCeEecCCCCCCcccCC-----
Q 003594 531 VFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEP----RPIVHGSLTPSSILLDR----- 601 (808)
Q Consensus 531 V~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~----~~iiHrDLKp~NILld~----- 601 (808)
||||+++|+|.++|.... .....+++..++.|+.||+.||.|||+.++ .+||||||||+||||+.
T Consensus 92 VMEY~~gGSL~~lL~k~~------~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~l 165 (1021)
T PTZ00266 92 LMEFCDAGDLSRNIQKCY------KMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHI 165 (1021)
T ss_pred EEeCCCCCcHHHHHHHHh------hccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccc
Confidence 999999999999996431 234579999999999999999999998542 45999999999999964
Q ss_pred ------------CccEEEEeCCCccc--------------------------CCCCcchhhHhHHHHHHHHHcCCCCchh
Q 003594 602 ------------NLVAKISGLGLNIC--------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGL 643 (808)
Q Consensus 602 ------------~~~~kl~DfGla~~--------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~ 643 (808)
.+.+||+|||++.. ..++.++||||||||||+|+||.+||..
T Consensus 166 g~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~ 245 (1021)
T PTZ00266 166 GKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHK 245 (1021)
T ss_pred ccccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCc
Confidence 34599999998742 1267899999999999999999999964
Q ss_pred hHHHhhhcHHHHHHHhccCCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 644 VEKAMALDQTTLMQVLDGNAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 644 ~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
... ...+...+...........+.++.+||..||..+ |..||++.+++.
T Consensus 246 ~~~-----~~qli~~lk~~p~lpi~~~S~eL~dLI~~~L~~d--PeeRPSa~QlL~ 294 (1021)
T PTZ00266 246 ANN-----FSQLISELKRGPDLPIKGKSKELNILIKNLLNLS--AKERPSALQCLG 294 (1021)
T ss_pred CCc-----HHHHHHHHhcCCCCCcCCCCHHHHHHHHHHhcCC--hhHCcCHHHHhc
Confidence 321 1112222221111112346789999999999999 999999999984
No 183
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.98 E-value=7.6e-32 Score=286.27 Aligned_cols=212 Identities=25% Similarity=0.385 Sum_probs=167.5
Q ss_pred ccccCCceEEEEEEEC--------------CeEEEEEEccCCC--CHHHHHHHHHHHhccCCCCccceeecccc--ceEE
Q 003594 469 LKCAGDWTNVYRGRLN--------------HASVAIKTLNNGL--SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCI 530 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~~--------------~~~vAiK~l~~~~--~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~l 530 (808)
.+|.|+||.||+|.+. ...|++|.+.... ....|..|+.++..++||||++++++|.+ ..++
T Consensus 2 ~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~l 81 (262)
T cd05077 2 HLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENIM 81 (262)
T ss_pred ccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCEE
Confidence 3589999999999852 1359999987322 23578889999999999999999999865 6899
Q ss_pred EEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCcc------
Q 003594 531 VFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLV------ 604 (808)
Q Consensus 531 V~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~------ 604 (808)
||||+++|+|..++.. ....+++..++.|+.||+.||.|||+ ++|+||||||+|||++.++.
T Consensus 82 v~e~~~~~~l~~~~~~---------~~~~~~~~~~~~i~~qi~~~l~~lH~---~~ivH~dlkp~Nill~~~~~~~~~~~ 149 (262)
T cd05077 82 VEEFVEFGPLDLFMHR---------KSDVLTTPWKFKVAKQLASALSYLED---KDLVHGNVCTKNILLAREGIDGECGP 149 (262)
T ss_pred EEecccCCCHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHhhh---CCeECCCCCcccEEEecCCccCCCCc
Confidence 9999999999998842 23568999999999999999999999 66999999999999987664
Q ss_pred -EEEEeCCCccc----------------------CCCCcchhhHhHHHHHHHHH-cCCCCchhhHHHhhhcHHHHHHHhc
Q 003594 605 -AKISGLGLNIC----------------------DQLNVRSDIRAFGTLLLHLL-TGRNWAGLVEKAMALDQTTLMQVLD 660 (808)
Q Consensus 605 -~kl~DfGla~~----------------------~~~t~ksDVwS~Gvil~ell-tG~~P~~~~~~~~~~~~~~~~~~ld 660 (808)
+|++|||++.. ..++.++|||||||++|+|+ +|..||..... ........
T Consensus 150 ~~~l~d~g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~------~~~~~~~~ 223 (262)
T cd05077 150 FIKLSDPGIPITVLSRQECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTL------AEKERFYE 223 (262)
T ss_pred eeEeCCCCCCccccCcccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcch------hHHHHHHh
Confidence 89999998742 23567899999999999998 58888754221 01111111
Q ss_pred cCCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHH
Q 003594 661 GNAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKEL 701 (808)
Q Consensus 661 ~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L 701 (808)
.. .......+.++.+|+.+||+.| |.+||++.+|+..|
T Consensus 224 ~~-~~~~~~~~~~~~~li~~cl~~d--p~~Rp~~~~il~~~ 261 (262)
T cd05077 224 GQ-CMLVTPSCKELADLMTHCMNYD--PNQRPFFRAIMRDI 261 (262)
T ss_pred cC-ccCCCCChHHHHHHHHHHcCCC--hhhCcCHHHHHHhc
Confidence 11 1122234578999999999999 99999999998876
No 184
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=99.98 E-value=5e-32 Score=291.44 Aligned_cols=218 Identities=21% Similarity=0.314 Sum_probs=176.1
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccCCC-----CHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNNGL-----SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPN 537 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~-----~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~ 537 (808)
.+++|.|+||.||++.+ +++.||||.+.... ....+.+|+.++.+++|+||+.+++.+.+ ..++||||+++
T Consensus 5 ~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~g 84 (285)
T cd05630 5 YRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMNG 84 (285)
T ss_pred eEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEecCC
Confidence 46678999999999998 57899999986321 12457789999999999999999998854 78999999999
Q ss_pred CCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--
Q 003594 538 GNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-- 615 (808)
Q Consensus 538 gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-- 615 (808)
|+|.+++... ....+++..+..++.|++.||.|||+ .+|+||||||+|||++.++.++|+|||++..
T Consensus 85 ~~L~~~l~~~--------~~~~l~~~~~~~~~~qi~~~l~~lH~---~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~ 153 (285)
T cd05630 85 GDLKFHIYHM--------GEAGFEEGRAVFYAAEICCGLEDLHQ---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVP 153 (285)
T ss_pred CcHHHHHHHh--------cccCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCCCHHHEEECCCCCEEEeeccceeecC
Confidence 9999998542 23468999999999999999999999 6699999999999999999999999998742
Q ss_pred ----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHH
Q 003594 616 ----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEE 673 (808)
Q Consensus 616 ----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~ 673 (808)
..++.++|||||||++|+|++|++||...... .........+.......+..++..
T Consensus 154 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 231 (285)
T cd05630 154 EGQTIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKK--IKREEVERLVKEVQEEYSEKFSPD 231 (285)
T ss_pred CCccccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCcc--chHHHHHhhhhhhhhhcCccCCHH
Confidence 23577899999999999999999999753211 111222222222223345567788
Q ss_pred HHHHHHHhhccCCCcCcccc-----HHhhHH
Q 003594 674 LAGIALKCLSADQDANRDLR-----IAGVMK 699 (808)
Q Consensus 674 l~~Li~~Cl~~dp~p~~Rps-----~~evl~ 699 (808)
+.+|+.+||+.| |..||+ +.+++.
T Consensus 232 ~~~li~~~l~~~--p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 232 ARSLCKMLLCKD--PKERLGCQGGGAREVKE 260 (285)
T ss_pred HHHHHHHHhhcC--HHHccCCCCCchHHHHc
Confidence 999999999999 999999 677765
No 185
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.98 E-value=5.3e-32 Score=309.00 Aligned_cols=221 Identities=16% Similarity=0.254 Sum_probs=168.2
Q ss_pred cccccccCCceEEEEEEE--CCeEEEEEEccCCCCHHHHHHHHHHHhccCCCCccceeecccc----------ceEEEEe
Q 003594 466 RFRLKCAGDWTNVYRGRL--NHASVAIKTLNNGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE----------LKCIVFE 533 (808)
Q Consensus 466 ~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~----------~~~lV~E 533 (808)
..+++|.|+||.||+|.. ++..||||++.... ....+|+.+|+.++|||||++++++.. ..++|||
T Consensus 70 ~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~--~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE 147 (440)
T PTZ00036 70 LGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP--QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVME 147 (440)
T ss_pred EeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc--chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEEe
Confidence 346678999999999998 57899999886322 345679999999999999999887521 3568999
Q ss_pred ecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCC-ccEEEEeCCC
Q 003594 534 YMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRN-LVAKISGLGL 612 (808)
Q Consensus 534 y~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~-~~~kl~DfGl 612 (808)
|++ ++|.+++.... .....+++..+..|+.||+.||.|||+ .+|+||||||+||||+.+ +.+||+|||+
T Consensus 148 ~~~-~~l~~~~~~~~------~~~~~l~~~~~~~~~~qi~~gL~yLH~---~~IiHrDLKp~NILl~~~~~~vkL~DFGl 217 (440)
T PTZ00036 148 FIP-QTVHKYMKHYA------RNNHALPLFLVKLYSYQLCRALAYIHS---KFICHRDLKPQNLLIDPNTHTLKLCDFGS 217 (440)
T ss_pred cCC-ccHHHHHHHHh------hcCCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCcCHHHEEEcCCCCceeeecccc
Confidence 997 57888775431 245679999999999999999999999 669999999999999866 4799999999
Q ss_pred ccc-------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhc----------HHHHHH
Q 003594 613 NIC-------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALD----------QTTLMQ 657 (808)
Q Consensus 613 a~~-------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~----------~~~~~~ 657 (808)
++. ..++.++|||||||+||||+||.+||.......... ...+..
T Consensus 218 a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~~~~~~ 297 (440)
T PTZ00036 218 AKNLLAGQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTEDQLKE 297 (440)
T ss_pred chhccCCCCcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHHH
Confidence 852 146789999999999999999999996421100000 000000
Q ss_pred H----hc---c------CCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 658 V----LD---G------NAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 658 ~----ld---~------~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
. .+ + ....+|...+.++.+|+.+||.+| |..|||+.+++..
T Consensus 298 ~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~d--P~~R~ta~e~l~h 351 (440)
T PTZ00036 298 MNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYE--PLKRLNPIEALAD 351 (440)
T ss_pred hchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCC--hhHCcCHHHHhCC
Confidence 0 00 0 001123346678999999999999 9999999999843
No 186
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.98 E-value=7.7e-32 Score=289.85 Aligned_cols=214 Identities=20% Similarity=0.284 Sum_probs=172.3
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccCC-----CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNNG-----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPN 537 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~ 537 (808)
.+++|.|+||.||+|.+ +++.||+|.+... .....+.+|+.+|..++|+||+.+++++.. ..++||||+++
T Consensus 5 ~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 84 (285)
T cd05632 5 YRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTIMNG 84 (285)
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEeccC
Confidence 35678999999999998 5789999998632 123457889999999999999999988754 78999999999
Q ss_pred CCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--
Q 003594 538 GNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-- 615 (808)
Q Consensus 538 gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-- 615 (808)
|+|.+++... ....+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||++..
T Consensus 85 ~~L~~~~~~~--------~~~~~~~~~~~~~~~ql~~~l~~lH~---~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~ 153 (285)
T cd05632 85 GDLKFHIYNM--------GNPGFEEERALFYAAEILCGLEDLHR---ENTVYRDLKPENILLDDYGHIRISDLGLAVKIP 153 (285)
T ss_pred ccHHHHHHHh--------cCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEECCCCCEEEecCCcceecC
Confidence 9999988532 23469999999999999999999999 6699999999999999999999999998732
Q ss_pred ----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHH
Q 003594 616 ----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEE 673 (808)
Q Consensus 616 ----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~ 673 (808)
..++.++|||||||++|+|++|.+||...... .........+......++...+..
T Consensus 154 ~~~~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 231 (285)
T cd05632 154 EGESIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEK--VKREEVDRRVLETEEVYSAKFSEE 231 (285)
T ss_pred CCCcccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHhhhccccccCccCCHH
Confidence 23577899999999999999999999643221 011111222222233455667889
Q ss_pred HHHHHHHhhccCCCcCccccHH
Q 003594 674 LAGIALKCLSADQDANRDLRIA 695 (808)
Q Consensus 674 l~~Li~~Cl~~dp~p~~Rps~~ 695 (808)
+.+|+.+||+.| |..||++.
T Consensus 232 ~~~li~~~l~~~--P~~R~~~~ 251 (285)
T cd05632 232 AKSICKMLLTKD--PKQRLGCQ 251 (285)
T ss_pred HHHHHHHHccCC--HhHcCCCc
Confidence 999999999999 99999943
No 187
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=99.98 E-value=3.3e-32 Score=304.01 Aligned_cols=220 Identities=19% Similarity=0.260 Sum_probs=175.8
Q ss_pred ccccccccccccCCceEEEEEEE--CCeEEEEEEccC-----CCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEE
Q 003594 461 EDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN-----GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIV 531 (808)
Q Consensus 461 ~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~-----~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV 531 (808)
++|.. .+.+|+|+||.||++.. +++.||+|++.. ......+.+|+.+++.++||||+++++++.+ ..|+|
T Consensus 43 ~~y~~-~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~lv 121 (370)
T cd05621 43 EDYDV-VKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMV 121 (370)
T ss_pred HHCeE-EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEE
Confidence 34443 35678999999999998 578999999862 1233568899999999999999999999865 78999
Q ss_pred EeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCC
Q 003594 532 FEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLG 611 (808)
Q Consensus 532 ~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfG 611 (808)
|||+++|+|.+++.. ..+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 122 ~Ey~~gg~L~~~l~~-----------~~~~~~~~~~~~~qil~aL~~LH~---~~IvHrDLKp~NILl~~~~~~kL~DFG 187 (370)
T cd05621 122 MEYMPGGDLVNLMSN-----------YDVPEKWAKFYTAEVVLALDAIHS---MGLIHRDVKPDNMLLDKHGHLKLADFG 187 (370)
T ss_pred EcCCCCCcHHHHHHh-----------cCCCHHHHHHHHHHHHHHHHHHHH---CCeEecCCCHHHEEECCCCCEEEEecc
Confidence 999999999999942 247889999999999999999999 669999999999999999999999999
Q ss_pred Cccc------------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhcc
Q 003594 612 LNIC------------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDG 661 (808)
Q Consensus 612 la~~------------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~ 661 (808)
++.. ..++.++|||||||+||+|++|++||.... ....+..+.+.
T Consensus 188 ~a~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~-----~~~~~~~i~~~ 262 (370)
T cd05621 188 TCMKMDETGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADS-----LVGTYSKIMDH 262 (370)
T ss_pred cceecccCCceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCC-----HHHHHHHHHhC
Confidence 8742 015678999999999999999999996532 12333444443
Q ss_pred -CCCCCCh--hhHHHHHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 662 -NAGIWPL--DLAEELAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 662 -~~~~~p~--~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
....+|. ..+..+.+++.+||..++.+..|+++.++++.
T Consensus 263 ~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 263 KNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred CcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 2233443 46889999999999866434458998888764
No 188
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=99.98 E-value=2.1e-32 Score=302.67 Aligned_cols=213 Identities=20% Similarity=0.277 Sum_probs=174.6
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccC-----CCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNN-----GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPN 537 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~-----~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~ 537 (808)
.+.+|.|+||.||+|.. +|+.||||++.. ......+..|+.++..++||||+++++++.+ ..|+||||+++
T Consensus 6 ~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 85 (350)
T cd05573 6 IKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVMEYMPG 85 (350)
T ss_pred EEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEEcCCCC
Confidence 35678999999999998 489999999972 1334678899999999999999999999865 78999999999
Q ss_pred CCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--
Q 003594 538 GNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-- 615 (808)
Q Consensus 538 gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-- 615 (808)
|+|.+++. ....+++..+..|+.||+.||.|||+ .+|+||||||+|||++.++.+||+|||++..
T Consensus 86 ~~L~~~l~----------~~~~l~~~~~~~i~~qi~~aL~~LH~---~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~ 152 (350)
T cd05573 86 GDLMNLLI----------RKDVFPEETARFYIAELVLALDSVHK---LGFIHRDIKPDNILIDADGHIKLADFGLCKKMN 152 (350)
T ss_pred CCHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEeecCCCCccCc
Confidence 99999994 33578999999999999999999999 6699999999999999999999999998742
Q ss_pred ----------------------------------------------------CCCCcchhhHhHHHHHHHHHcCCCCchh
Q 003594 616 ----------------------------------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGL 643 (808)
Q Consensus 616 ----------------------------------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~ 643 (808)
..++.++|||||||+||+|++|++||..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~ 232 (350)
T cd05573 153 KAKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYS 232 (350)
T ss_pred ccCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCC
Confidence 1357799999999999999999999975
Q ss_pred hHHHhhhcHHHHHHHhcc-CCCCCC--hhhHHHHHHHHHHhhccCCCcCcccc-HHhhHHH
Q 003594 644 VEKAMALDQTTLMQVLDG-NAGIWP--LDLAEELAGIALKCLSADQDANRDLR-IAGVMKE 700 (808)
Q Consensus 644 ~~~~~~~~~~~~~~~ld~-~~~~~p--~~~~~~l~~Li~~Cl~~dp~p~~Rps-~~evl~~ 700 (808)
... ......+... .....| ..+++.+.+|+.+||. | |..||+ +.+++..
T Consensus 233 ~~~-----~~~~~~i~~~~~~~~~p~~~~~~~~~~~li~~ll~-d--p~~R~~s~~~ll~h 285 (350)
T cd05573 233 DTL-----QETYNKIINWKESLRFPPDPPVSPEAIDLICRLLC-D--PEDRLGSFEEIKSH 285 (350)
T ss_pred CCH-----HHHHHHHhccCCcccCCCCCCCCHHHHHHHHHHcc-C--hhhcCCCHHHHhcC
Confidence 321 1222223221 111122 2358899999999997 8 899999 9998763
No 189
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.98 E-value=1.3e-31 Score=285.05 Aligned_cols=223 Identities=20% Similarity=0.396 Sum_probs=178.9
Q ss_pred cccccCCceEEEEEEE-----CCeEEEEEEccCCC----CHHHHHHHHHHHhccCCCCccceeecccc--------ceEE
Q 003594 468 RLKCAGDWTNVYRGRL-----NHASVAIKTLNNGL----SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--------LKCI 530 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~-----~~~~vAiK~l~~~~----~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--------~~~l 530 (808)
+++|+|+||.||+|.+ ++..||||++.... ..+.+.+|+.+++.++||||+++++++.. ..++
T Consensus 5 ~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~ 84 (273)
T cd05074 5 RMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLPIPMV 84 (273)
T ss_pred hcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCcccceEE
Confidence 4678999999999986 35789999987322 23568899999999999999999998743 2478
Q ss_pred EEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeC
Q 003594 531 VFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGL 610 (808)
Q Consensus 531 V~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~Df 610 (808)
+++|+++|+|.+++...... .....+++.....++.||+.||+|||+ .+|+||||||+|||++.++.+||+||
T Consensus 85 ~~~~~~~~~l~~~~~~~~~~----~~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 85 ILPFMKHGDLHTFLLMSRIG----EEPFTLPLQTLVRFMIDIASGMEYLSS---KNFIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred EEecCCCCcHHHHHHHhccc----CCCCCCCHHHHHHHHHHHHHHHHHHHh---CCEeecccchhhEEEcCCCCEEECcc
Confidence 99999999999988543110 122458999999999999999999999 56999999999999999999999999
Q ss_pred CCccc---------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccC
Q 003594 611 GLNIC---------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGN 662 (808)
Q Consensus 611 Gla~~---------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~ 662 (808)
|+++. ..++.++||||||+++|+|++ |++||..... ......+....
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~-----~~~~~~~~~~~ 232 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN-----SEIYNYLIKGN 232 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH-----HHHHHHHHcCC
Confidence 98752 124678999999999999999 8898864321 12222333333
Q ss_pred CCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHH
Q 003594 663 AGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEV 704 (808)
Q Consensus 663 ~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l 704 (808)
....+...+..+.+++.+||..+ |..||++.+++..|+.+
T Consensus 233 ~~~~~~~~~~~~~~l~~~~l~~~--p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 233 RLKQPPDCLEDVYELMCQCWSPE--PKCRPSFQHLRDQLELI 272 (273)
T ss_pred cCCCCCCCCHHHHHHHHHHcCCC--hhhCcCHHHHHHHHHhh
Confidence 34445567789999999999999 99999999999999875
No 190
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.98 E-value=5.6e-32 Score=296.56 Aligned_cols=208 Identities=21% Similarity=0.301 Sum_probs=170.7
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccC-----CCCHHHHHHHHHHHhccC-CCCccceeecccc--ceEEEEeecC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNN-----GLSEEDFQAKVSFLTAVR-HPHLVAVMGCCSE--LKCIVFEYMP 536 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~-----~~~~~~~~~Ei~il~~l~-HpnIv~l~g~~~~--~~~lV~Ey~~ 536 (808)
.+++|.|+||.||++.. +|..||||++.. ......+..|..++..+. ||+|+++++++.+ ..|+||||++
T Consensus 5 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~Ey~~ 84 (323)
T cd05615 5 LMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVMEYVN 84 (323)
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEEcCCC
Confidence 35678999999999998 578999999872 122356788999998885 5778888888754 7899999999
Q ss_pred CCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-
Q 003594 537 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC- 615 (808)
Q Consensus 537 ~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~- 615 (808)
||+|.+++. ....+++..+..|+.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 85 ~g~L~~~i~----------~~~~l~~~~~~~i~~qi~~al~~lH~---~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~ 151 (323)
T cd05615 85 GGDLMYHIQ----------QVGKFKEPQAVFYAAEISVGLFFLHR---RGIIYRDLKLDNVMLDSEGHIKIADFGMCKEH 151 (323)
T ss_pred CCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEecccccccc
Confidence 999999994 34569999999999999999999999 6699999999999999999999999998742
Q ss_pred ------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhH
Q 003594 616 ------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLA 671 (808)
Q Consensus 616 ------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~ 671 (808)
..++.++|||||||++|+|+||++||..... ......+.. ....+|...+
T Consensus 152 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~-----~~~~~~i~~-~~~~~p~~~~ 225 (323)
T cd05615 152 MVDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE-----DELFQSIME-HNVSYPKSLS 225 (323)
T ss_pred CCCCccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCH-----HHHHHHHHh-CCCCCCccCC
Confidence 2367889999999999999999999975321 122233332 3345666788
Q ss_pred HHHHHHHHHhhccCCCcCccccHH
Q 003594 672 EELAGIALKCLSADQDANRDLRIA 695 (808)
Q Consensus 672 ~~l~~Li~~Cl~~dp~p~~Rps~~ 695 (808)
..+.+++.+||+.+ |..|++..
T Consensus 226 ~~~~~li~~~l~~~--p~~R~~~~ 247 (323)
T cd05615 226 KEAVSICKGLMTKH--PSKRLGCG 247 (323)
T ss_pred HHHHHHHHHHcccC--HhhCCCCC
Confidence 89999999999999 99999854
No 191
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.98 E-value=9.4e-32 Score=283.53 Aligned_cols=212 Identities=25% Similarity=0.407 Sum_probs=170.3
Q ss_pred ccccCCceEEEEEEECC------------eEEEEEEccCCCC-HHHHHHHHHHHhccCCCCccceeecccc-ceEEEEee
Q 003594 469 LKCAGDWTNVYRGRLNH------------ASVAIKTLNNGLS-EEDFQAKVSFLTAVRHPHLVAVMGCCSE-LKCIVFEY 534 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~~~------------~~vAiK~l~~~~~-~~~~~~Ei~il~~l~HpnIv~l~g~~~~-~~~lV~Ey 534 (808)
.+|+|+||.||+|.+.+ ..|++|.+..... ...|.+|+.++++++||||++++|+|.. ..++||||
T Consensus 2 ~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~lv~e~ 81 (259)
T cd05037 2 HLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRDSLAFFETASLMSQLSHKHLVKLYGVCVRDENIMVEEY 81 (259)
T ss_pred cccccccceEEEEEEeccCCccccCCccceeeeeeccccchhhHHHHHHHHHHHHcCCCcchhheeeEEecCCcEEEEEc
Confidence 46899999999999843 2488898873332 6789999999999999999999998864 67899999
Q ss_pred cCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCc-------cEEE
Q 003594 535 MPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNL-------VAKI 607 (808)
Q Consensus 535 ~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~-------~~kl 607 (808)
+++|+|.+++... ...+++..++.++.||+.||.|||+ .+|+||||||+|||++.++ .+||
T Consensus 82 ~~~~~L~~~l~~~---------~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dlkp~Nill~~~~~~~~~~~~~kl 149 (259)
T cd05037 82 VKFGPLDVFLHRE---------KNNVSLHWKLDVAKQLASALHYLED---KKLVHGNVCGKNILVARYGLNEGYVPFIKL 149 (259)
T ss_pred CCCCcHHHHHHhh---------ccCCCHHHHHHHHHHHHHHHHHHhh---CCeecccCccceEEEecCccccCCceeEEe
Confidence 9999999999532 2278999999999999999999999 6699999999999999887 8999
Q ss_pred EeCCCccc---------------------C--CCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCC
Q 003594 608 SGLGLNIC---------------------D--QLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNA 663 (808)
Q Consensus 608 ~DfGla~~---------------------~--~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~ 663 (808)
+|||++.. . .++.++||||||+++|+|++ |..||..... ..........
T Consensus 150 ~Dfg~a~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~-----~~~~~~~~~~-- 222 (259)
T cd05037 150 SDPGIPITVLSREERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSS-----SEKERFYQDQ-- 222 (259)
T ss_pred CCCCcccccccccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCc-----hhHHHHHhcC--
Confidence 99998753 1 46778999999999999999 5777754321 0111111111
Q ss_pred CCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHH
Q 003594 664 GIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKEL 701 (808)
Q Consensus 664 ~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L 701 (808)
...+......+.+++.+||..+ |..||++.+|++.|
T Consensus 223 ~~~~~~~~~~~~~li~~~l~~~--p~~Rpt~~~il~~l 258 (259)
T cd05037 223 HRLPMPDCAELANLINQCWTYD--PTKRPSFRAILRDL 258 (259)
T ss_pred CCCCCCCchHHHHHHHHHhccC--hhhCCCHHHHHHhc
Confidence 1222223489999999999999 99999999999876
No 192
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.98 E-value=3.1e-32 Score=305.54 Aligned_cols=213 Identities=19% Similarity=0.231 Sum_probs=170.1
Q ss_pred cccccccCCceEEEEEEE--CCeEEEEEEccCC-----CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecC
Q 003594 466 RFRLKCAGDWTNVYRGRL--NHASVAIKTLNNG-----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMP 536 (808)
Q Consensus 466 ~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~ 536 (808)
..+.+|.|+||.||+|.. ++..||||++... .....+.+|+.++++++|||||+++++|.+ ..||||||++
T Consensus 5 ~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E~~~ 84 (382)
T cd05625 5 KIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYIP 84 (382)
T ss_pred EEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEeCCC
Confidence 456778999999999998 6789999998732 123568899999999999999999999965 7899999999
Q ss_pred CCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-
Q 003594 537 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC- 615 (808)
Q Consensus 537 ~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~- 615 (808)
+|+|.+++. ....+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||++..
T Consensus 85 gg~L~~~l~----------~~~~~~e~~~~~~~~qi~~al~~lH~---~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~ 151 (382)
T cd05625 85 GGDMMSLLI----------RMGIFPEDLARFYIAELTCAVESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGF 151 (382)
T ss_pred CCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEEeECCCCccc
Confidence 999999994 33568899999999999999999999 5699999999999999999999999998520
Q ss_pred -----------------------------------------------------------------------CCCCcchhh
Q 003594 616 -----------------------------------------------------------------------DQLNVRSDI 624 (808)
Q Consensus 616 -----------------------------------------------------------------------~~~t~ksDV 624 (808)
..++.++||
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~Di 231 (382)
T cd05625 152 RWTHDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDW 231 (382)
T ss_pred cccccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeE
Confidence 246788999
Q ss_pred HhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhcc-CCCCC--ChhhHHHHHHHHHHhhccCCCcCcccc---HHhhH
Q 003594 625 RAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDG-NAGIW--PLDLAEELAGIALKCLSADQDANRDLR---IAGVM 698 (808)
Q Consensus 625 wS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~-~~~~~--p~~~~~~l~~Li~~Cl~~dp~p~~Rps---~~evl 698 (808)
|||||+||||++|++||..... ......++.. ..... ....++++.+++.+|+ .+ |..|++ +.+++
T Consensus 232 wSlGvil~elltG~~Pf~~~~~-----~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~-~~--p~~R~~~~~~~ei~ 303 (382)
T cd05625 232 WSVGVILYEMLVGQPPFLAQTP-----LETQMKVINWQTSLHIPPQAKLSPEASDLIIKLC-RG--PEDRLGKNGADEIK 303 (382)
T ss_pred EechHHHHHHHhCCCCCCCCCH-----HHHHHHHHccCCCcCCCCcccCCHHHHHHHHHHc-cC--HhHcCCCCCHHHHh
Confidence 9999999999999999975321 1122222221 11122 2356788999998876 47 888887 66655
Q ss_pred H
Q 003594 699 K 699 (808)
Q Consensus 699 ~ 699 (808)
.
T Consensus 304 ~ 304 (382)
T cd05625 304 A 304 (382)
T ss_pred c
Confidence 3
No 193
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.98 E-value=8.9e-32 Score=283.67 Aligned_cols=216 Identities=19% Similarity=0.300 Sum_probs=178.8
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccC---CCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNN---GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGN 539 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~---~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gs 539 (808)
.+.+|.|+||.||++.. ++..||+|.++. ....+.+.+|+.+++.++||||+++++++.+ ..++||||+++|+
T Consensus 5 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 84 (255)
T cd08219 5 LRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYCDGGD 84 (255)
T ss_pred EEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeCCCCc
Confidence 35678999999999998 678999999862 2234678899999999999999999999865 7899999999999
Q ss_pred HHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc----
Q 003594 540 LRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC---- 615 (808)
Q Consensus 540 L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~---- 615 (808)
|.+++... ....+++...+.++.||+.||.|||+ .+|+|+||||+||+++.++.++|+|||++..
T Consensus 85 l~~~~~~~--------~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~ 153 (255)
T cd08219 85 LMQKIKLQ--------RGKLFPEDTILQWFVQMCLGVQHIHE---KRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSP 153 (255)
T ss_pred HHHHHHhc--------cCCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEECCCCcEEEcccCcceeeccc
Confidence 99988532 33568999999999999999999999 5699999999999999999999999998742
Q ss_pred ---------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHHH
Q 003594 616 ---------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEEL 674 (808)
Q Consensus 616 ---------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l 674 (808)
..++.++||||||+++|+|++|.+||..... ......+........|..++..+
T Consensus 154 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 228 (255)
T cd08219 154 GAYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSW-----KNLILKVCQGSYKPLPSHYSYEL 228 (255)
T ss_pred ccccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCH-----HHHHHHHhcCCCCCCCcccCHHH
Confidence 2356789999999999999999999975321 12222333333444566678899
Q ss_pred HHHHHHhhccCCCcCccccHHhhHHH
Q 003594 675 AGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 675 ~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
.+|+.+||+.| |..||++.+++..
T Consensus 229 ~~li~~~l~~~--P~~Rp~~~~il~~ 252 (255)
T cd08219 229 RSLIKQMFKRN--PRSRPSATTILSR 252 (255)
T ss_pred HHHHHHHHhCC--cccCCCHHHHhhc
Confidence 99999999999 9999999998764
No 194
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.98 E-value=2.3e-31 Score=279.59 Aligned_cols=214 Identities=24% Similarity=0.406 Sum_probs=177.4
Q ss_pred ccccCCceEEEEEEEC-CeEEEEEEccCCC---CHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCHHH
Q 003594 469 LKCAGDWTNVYRGRLN-HASVAIKTLNNGL---SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNLRD 542 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~~-~~~vAiK~l~~~~---~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL~~ 542 (808)
++|.|+||.||++.+. ++.||+|.+.... ....|.+|+.++++++||||+++++++.+ ..++||||+++++|.+
T Consensus 2 ~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~~ 81 (251)
T cd05041 2 KIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLLT 81 (251)
T ss_pred ccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHHH
Confidence 5688999999999984 8999999987332 23578999999999999999999999865 7899999999999999
Q ss_pred HHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-------
Q 003594 543 KLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC------- 615 (808)
Q Consensus 543 ~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~------- 615 (808)
++... ...+++..++.++.+++.||.|||+ .+++||||||+|||++.++.+||+|||++..
T Consensus 82 ~l~~~---------~~~~~~~~~~~~~~~~~~~l~~lH~---~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~ 149 (251)
T cd05041 82 FLRKK---------KNRLTVKKLLQMSLDAAAGMEYLES---KNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYT 149 (251)
T ss_pred HHHhc---------CCCCCHHHHHHHHHHHHHHHHHHHh---CCEehhhcCcceEEEcCCCcEEEeeccccccccCCcce
Confidence 99532 3468899999999999999999999 5599999999999999999999999998742
Q ss_pred --------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhc-cCCCCCChhhHHH
Q 003594 616 --------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLD-GNAGIWPLDLAEE 673 (808)
Q Consensus 616 --------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld-~~~~~~p~~~~~~ 673 (808)
..++.++||||||+++|+|+| |.+||..... ......+. ......|...+..
T Consensus 150 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~------~~~~~~~~~~~~~~~~~~~~~~ 223 (251)
T cd05041 150 VSDGLKQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSN------QQTRERIESGYRMPAPQLCPEE 223 (251)
T ss_pred eccccCcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCH------HHHHHHHhcCCCCCCCccCCHH
Confidence 235678999999999999999 8888864321 11112222 2233445677889
Q ss_pred HHHHHHHhhccCCCcCccccHHhhHHHHH
Q 003594 674 LAGIALKCLSADQDANRDLRIAGVMKELD 702 (808)
Q Consensus 674 l~~Li~~Cl~~dp~p~~Rps~~evl~~L~ 702 (808)
+.+++.+||..+ |..||++.++++.|+
T Consensus 224 ~~~li~~~l~~~--p~~Rp~~~ell~~l~ 250 (251)
T cd05041 224 IYRLMLQCWAYD--PENRPSFSEIYNELQ 250 (251)
T ss_pred HHHHHHHHhccC--hhhCcCHHHHHHHhh
Confidence 999999999999 999999999998875
No 195
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.98 E-value=1.4e-31 Score=289.31 Aligned_cols=231 Identities=19% Similarity=0.316 Sum_probs=176.6
Q ss_pred ccccccCCceEEEEEEEC------------------CeEEEEEEccCCCC---HHHHHHHHHHHhccCCCCccceeeccc
Q 003594 467 FRLKCAGDWTNVYRGRLN------------------HASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCS 525 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~~------------------~~~vAiK~l~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~ 525 (808)
...+|+|+||.||++.+. +..||+|++..... ...|.+|+.+++.++||||+++++++.
T Consensus 10 ~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~~~~~~ 89 (296)
T cd05095 10 KEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRLLAVCI 89 (296)
T ss_pred eeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEe
Confidence 345689999999998642 34699999974322 357899999999999999999999985
Q ss_pred c--ceEEEEeecCCCCHHHHHhhcccccc-ccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCC
Q 003594 526 E--LKCIVFEYMPNGNLRDKLFTSQRNYK-NCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRN 602 (808)
Q Consensus 526 ~--~~~lV~Ey~~~gsL~~~l~~~~~~~~-~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~ 602 (808)
. ..++||||+++|+|.+++........ .......+++..+..++.||+.||.|||+ .+|+||||||+|||++.+
T Consensus 90 ~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~---~~i~H~dlkp~Nili~~~ 166 (296)
T cd05095 90 TSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSS---LNFVHRDLATRNCLVGKN 166 (296)
T ss_pred cCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHH---CCeecccCChheEEEcCC
Confidence 4 78999999999999999965421100 01223458899999999999999999999 569999999999999999
Q ss_pred ccEEEEeCCCccc---------------------------CCCCcchhhHhHHHHHHHHHc--CCCCchhhHHHhhhcH-
Q 003594 603 LVAKISGLGLNIC---------------------------DQLNVRSDIRAFGTLLLHLLT--GRNWAGLVEKAMALDQ- 652 (808)
Q Consensus 603 ~~~kl~DfGla~~---------------------------~~~t~ksDVwS~Gvil~ellt--G~~P~~~~~~~~~~~~- 652 (808)
+.++|+|||++.. ..++.++|||||||++|||++ |..||...........
T Consensus 167 ~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~ 246 (296)
T cd05095 167 YTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVIENT 246 (296)
T ss_pred CCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChHHHHHHH
Confidence 9999999998742 235678999999999999998 6678754321100100
Q ss_pred -HHHHHHhccCCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHH
Q 003594 653 -TTLMQVLDGNAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELD 702 (808)
Q Consensus 653 -~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~ 702 (808)
..+.........+.+..++..+.+|+.+||+.| |..||++.+|++.|+
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~--p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 247 GEFFRDQGRQVYLPKPALCPDSLYKLMLSCWRRN--AKERPSFQEIHATLL 295 (296)
T ss_pred HHHHhhccccccCCCCCCCCHHHHHHHHHHcCCC--cccCCCHHHHHHHHh
Confidence 001111111122334457789999999999999 999999999999885
No 196
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.98 E-value=8e-32 Score=302.89 Aligned_cols=214 Identities=17% Similarity=0.264 Sum_probs=167.2
Q ss_pred cccccccCCceEEEEEEE--CCeEEEEEEccCCCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCHH
Q 003594 466 RFRLKCAGDWTNVYRGRL--NHASVAIKTLNNGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNLR 541 (808)
Q Consensus 466 ~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL~ 541 (808)
..+.+|.|+||.||++.+ +++.||||... ...+.+|+.+|++++|||||+++++|.. ..++||||+. ++|.
T Consensus 96 ~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~----~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~~-~~L~ 170 (391)
T PHA03212 96 ILETFTPGAEGFAFACIDNKTCEHVVIKAGQ----RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRYK-TDLY 170 (391)
T ss_pred EEEEEcCCCCeEEEEEEECCCCCEEEEechh----hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecCC-CCHH
Confidence 346678999999999998 57899999764 2457899999999999999999999854 7799999995 7899
Q ss_pred HHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc------
Q 003594 542 DKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC------ 615 (808)
Q Consensus 542 ~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~------ 615 (808)
.++. ....+++..++.|+.||+.||.|||+ .+|+||||||+|||++.++.+||+|||++..
T Consensus 171 ~~l~----------~~~~l~~~~~~~i~~qi~~aL~ylH~---~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~ 237 (391)
T PHA03212 171 CYLA----------AKRNIAICDILAIERSVLRAIQYLHE---NRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINA 237 (391)
T ss_pred HHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHhEEEcCCCCEEEEeCCcccccccccc
Confidence 9883 34568999999999999999999999 5699999999999999999999999999742
Q ss_pred --------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHH---------h--------------hh-c
Q 003594 616 --------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKA---------M--------------AL-D 651 (808)
Q Consensus 616 --------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~---------~--------------~~-~ 651 (808)
..++.++|||||||++|||+||.+||...... . .. .
T Consensus 238 ~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~ 317 (391)
T PHA03212 238 NKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDA 317 (391)
T ss_pred cccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcch
Confidence 23678999999999999999999776421100 0 00 0
Q ss_pred HHHHHHHh----cc---C---CCCCC--hhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 652 QTTLMQVL----DG---N---AGIWP--LDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 652 ~~~~~~~l----d~---~---~~~~p--~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
...+.... .. . .+.|. ...+.++.+|+.+||+.| |.+|||+.++++
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~d--P~~Rpta~elL~ 375 (391)
T PHA03212 318 QANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFD--AHHRPSAEALLD 375 (391)
T ss_pred hHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCC--hhhCCCHHHHhc
Confidence 00011000 00 0 01111 134678999999999999 999999999885
No 197
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.98 E-value=4.5e-32 Score=287.94 Aligned_cols=214 Identities=19% Similarity=0.213 Sum_probs=172.0
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccCC--CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCH
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNNG--LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNL 540 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~--~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL 540 (808)
.+.+|.|+||.||+|.. ++..||+|++... .....+.+|+.++.+++||||+++++++.. ..++||||+++|+|
T Consensus 14 ~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~~~~~~L 93 (267)
T cd06646 14 IQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEYCGGGSL 93 (267)
T ss_pred hheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeCCCCCcH
Confidence 35568999999999997 6789999998732 234568899999999999999999999854 78899999999999
Q ss_pred HHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-----
Q 003594 541 RDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC----- 615 (808)
Q Consensus 541 ~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~----- 615 (808)
.+++. ....+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||++..
T Consensus 94 ~~~~~----------~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd06646 94 QDIYH----------VTGPLSELQIAYVCRETLQGLAYLHS---KGKMHRDIKGANILLTDNGDVKLADFGVAAKITATI 160 (267)
T ss_pred HHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCCEEECcCccceeecccc
Confidence 99984 34568999999999999999999999 6699999999999999999999999998742
Q ss_pred -----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHh----ccCCCCCCh
Q 003594 616 -----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVL----DGNAGIWPL 668 (808)
Q Consensus 616 -----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~l----d~~~~~~p~ 668 (808)
..++.++|||||||++|+|++|.+||...... .....+. .+.....+.
T Consensus 161 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 235 (267)
T cd06646 161 AKRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPM-----RALFLMSKSNFQPPKLKDKT 235 (267)
T ss_pred cccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchh-----hhheeeecCCCCCCCCcccc
Confidence 11456799999999999999999998543211 0000110 111111123
Q ss_pred hhHHHHHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 669 DLAEELAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 669 ~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
..+..+.+++.+||..+ |..||++.++++.
T Consensus 236 ~~~~~~~~li~~~l~~~--P~~Rp~~~~il~~ 265 (267)
T cd06646 236 KWSSTFHNFVKISLTKN--PKKRPTAERLLTH 265 (267)
T ss_pred ccCHHHHHHHHHHhhCC--hhhCcCHHHHhcC
Confidence 45689999999999999 9999999998864
No 198
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.98 E-value=3e-32 Score=304.94 Aligned_cols=213 Identities=19% Similarity=0.226 Sum_probs=170.3
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccC-----CCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNN-----GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPN 537 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~-----~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~ 537 (808)
.+.+|.|+||.||++.. +++.||||++.. ......+.+|+.+|..++||||+++++.+.+ ..||||||+++
T Consensus 6 ~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~E~~~~ 85 (376)
T cd05598 6 IKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPG 85 (376)
T ss_pred EEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEEeCCCC
Confidence 45678999999999998 578999999862 2234668899999999999999999999865 78999999999
Q ss_pred CCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCcc---
Q 003594 538 GNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNI--- 614 (808)
Q Consensus 538 gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~--- 614 (808)
|+|.+++. ....+++..+..|+.||+.||.|||+ .+|+||||||+|||++.++.+||+|||++.
T Consensus 86 g~L~~~i~----------~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~ 152 (376)
T cd05598 86 GDMMSLLI----------RLGIFEEDLARFYIAELTCAIESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFR 152 (376)
T ss_pred CcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeCCCCHHHEEECCCCCEEEEeCCCCcccc
Confidence 99999994 34568899999999999999999999 569999999999999999999999999852
Q ss_pred ----------------------------------------------------c-------------CCCCcchhhHhHHH
Q 003594 615 ----------------------------------------------------C-------------DQLNVRSDIRAFGT 629 (808)
Q Consensus 615 ----------------------------------------------------~-------------~~~t~ksDVwS~Gv 629 (808)
. ..++.++|||||||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGv 232 (376)
T cd05598 153 WTHDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 232 (376)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccc
Confidence 0 23567899999999
Q ss_pred HHHHHHcCCCCchhhHHHhhhcHHHHHHHhcc---CCCCCChhhHHHHHHHHHHhhccCCCcCccc---cHHhhHHH
Q 003594 630 LLLHLLTGRNWAGLVEKAMALDQTTLMQVLDG---NAGIWPLDLAEELAGIALKCLSADQDANRDL---RIAGVMKE 700 (808)
Q Consensus 630 il~elltG~~P~~~~~~~~~~~~~~~~~~ld~---~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rp---s~~evl~~ 700 (808)
++|+|++|++||..... ......+... ...+....++..+.+++.+|+ .+ |.+|+ ++.+++..
T Consensus 233 ilyell~G~~Pf~~~~~-----~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~l~-~~--p~~R~~~~t~~ell~h 301 (376)
T cd05598 233 ILYEMLVGQPPFLADTP-----AETQLKVINWETTLHIPSQAKLSREASDLILRLC-CG--AEDRLGKNGADEIKAH 301 (376)
T ss_pred eeeehhhCCCCCCCCCH-----HHHHHHHhccCccccCCCCCCCCHHHHHHHHHHh-cC--HhhcCCCCCHHHHhCC
Confidence 99999999999975322 1111222221 111222356788999999976 47 78888 77777643
No 199
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.98 E-value=1.4e-31 Score=294.33 Aligned_cols=217 Identities=17% Similarity=0.202 Sum_probs=171.3
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccC-----CCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNN-----GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPN 537 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~-----~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~ 537 (808)
.+.+|+|+||.||++.. +++.||+|++.. ......+.+|+.++..++||||+++++++.+ ..||||||++|
T Consensus 6 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~Ey~~g 85 (331)
T cd05624 6 IKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVMDYYVG 85 (331)
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCC
Confidence 35678999999999998 568999999862 1223457889999999999999999999865 78999999999
Q ss_pred CCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--
Q 003594 538 GNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-- 615 (808)
Q Consensus 538 gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-- 615 (808)
|+|.+++... ...+++..+..++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||++..
T Consensus 86 g~L~~~l~~~---------~~~l~~~~~~~~~~qi~~~L~~lH~---~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~ 153 (331)
T cd05624 86 GDLLTLLSKF---------EDRLPEDMARFYIAEMVLAIHSIHQ---LHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMN 153 (331)
T ss_pred CcHHHHHHHh---------cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCchHHEEEcCCCCEEEEeccceeecc
Confidence 9999999532 3468999999999999999999999 6699999999999999999999999998632
Q ss_pred -----------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhcc-CCCC
Q 003594 616 -----------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDG-NAGI 665 (808)
Q Consensus 616 -----------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~-~~~~ 665 (808)
..++.++|||||||+||+|++|+.||..... ...+..+... ....
T Consensus 154 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~-----~~~~~~i~~~~~~~~ 228 (331)
T cd05624 154 QDGTVQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL-----VETYGKIMNHEERFQ 228 (331)
T ss_pred CCCceeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCH-----HHHHHHHHcCCCccc
Confidence 1256789999999999999999999964321 1222233322 1122
Q ss_pred CC---hhhHHHHHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 666 WP---LDLAEELAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 666 ~p---~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
+| ..++..+.+++.+||..++++..|+++.++++.
T Consensus 229 ~p~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 229 FPSHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred CCCccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 22 245789999999999876444446777777643
No 200
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=99.98 E-value=1e-31 Score=290.05 Aligned_cols=230 Identities=18% Similarity=0.323 Sum_probs=174.7
Q ss_pred cccccCCceEEEEEEECC----------------eEEEEEEccCCCC---HHHHHHHHHHHhccCCCCccceeecccc--
Q 003594 468 RLKCAGDWTNVYRGRLNH----------------ASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE-- 526 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~~~----------------~~vAiK~l~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~-- 526 (808)
+.+|+|+||.||++...+ ..||+|.++.... ...|.+|++++.+++||||+++++++..
T Consensus 11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~ 90 (295)
T cd05097 11 EKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLGVCVSDD 90 (295)
T ss_pred hccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEcCCC
Confidence 457899999999987632 3599999974332 3568899999999999999999999855
Q ss_pred ceEEEEeecCCCCHHHHHhhcccc--ccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCcc
Q 003594 527 LKCIVFEYMPNGNLRDKLFTSQRN--YKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLV 604 (808)
Q Consensus 527 ~~~lV~Ey~~~gsL~~~l~~~~~~--~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~ 604 (808)
..++||||+++++|.+++...... .........++|..++.++.|++.||.|||+ .+++||||||+|||++.++.
T Consensus 91 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~---~~i~H~dlkp~Nill~~~~~ 167 (295)
T cd05097 91 PLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLAS---LNFVHRDLATRNCLVGNHYT 167 (295)
T ss_pred ccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHh---cCeeccccChhhEEEcCCCc
Confidence 789999999999999999543100 0000122357999999999999999999999 56999999999999999999
Q ss_pred EEEEeCCCccc---------------------------CCCCcchhhHhHHHHHHHHHc--CCCCchhhHHHhhhcH--H
Q 003594 605 AKISGLGLNIC---------------------------DQLNVRSDIRAFGTLLLHLLT--GRNWAGLVEKAMALDQ--T 653 (808)
Q Consensus 605 ~kl~DfGla~~---------------------------~~~t~ksDVwS~Gvil~ellt--G~~P~~~~~~~~~~~~--~ 653 (808)
+||+|||++.. ..++.++|||||||++|+|++ |..||........... .
T Consensus 168 ~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~~~~ 247 (295)
T cd05097 168 IKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIENTGE 247 (295)
T ss_pred EEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHHHHH
Confidence 99999998742 234778999999999999998 5677764321100000 0
Q ss_pred HHHHHhccCCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHH
Q 003594 654 TLMQVLDGNAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELD 702 (808)
Q Consensus 654 ~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~ 702 (808)
.+...........+...+..+.+|+.+||+.+ |..||++.+|++.|+
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~--p~~RPs~~~i~~~l~ 294 (295)
T cd05097 248 FFRNQGRQIYLSQTPLCPSPVFKLMMRCWSRD--IKDRPTFNKIHHFLR 294 (295)
T ss_pred hhhhccccccCCCCCCCCHHHHHHHHHHcCCC--chhCcCHHHHHHHHh
Confidence 00111111112234456789999999999999 999999999998885
No 201
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.98 E-value=2.1e-31 Score=290.50 Aligned_cols=171 Identities=18% Similarity=0.262 Sum_probs=140.9
Q ss_pred ccccccCCceEEEEEEE----CCeEEEEEEccCCCCHHHHHHHHHHHhccCCCCccceeecccc----ceEEEEeecCCC
Q 003594 467 FRLKCAGDWTNVYRGRL----NHASVAIKTLNNGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE----LKCIVFEYMPNG 538 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~----~~~~vAiK~l~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~----~~~lV~Ey~~~g 538 (808)
.+.+|+|+||.||+|.. ++..||+|.+........+.+|+.+|++++||||+++++++.. ..|+||||+. +
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~-~ 84 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE-H 84 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC-C
Confidence 35678999999999986 3478999999855555678899999999999999999998843 5789999996 6
Q ss_pred CHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCccc----CCCccEEEEeCCCcc
Q 003594 539 NLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILL----DRNLVAKISGLGLNI 614 (808)
Q Consensus 539 sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILl----d~~~~~kl~DfGla~ 614 (808)
+|.+++........ ......+++..+..|+.||+.||.|||+ .+|+||||||+|||+ +.++.+||+|||+++
T Consensus 85 ~l~~~~~~~~~~~~-~~~~~~l~~~~~~~i~~qi~~al~~LH~---~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~ 160 (317)
T cd07868 85 DLWHIIKFHRASKA-NKKPVQLPRGMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFAR 160 (317)
T ss_pred CHHHHHHhcccccc-cCCcccCCHHHHHHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEecCCCCcCcEEEeecCcee
Confidence 89888854321100 0123468999999999999999999999 569999999999999 456899999999874
Q ss_pred c-----------------------------CCCCcchhhHhHHHHHHHHHcCCCCch
Q 003594 615 C-----------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAG 642 (808)
Q Consensus 615 ~-----------------------------~~~t~ksDVwS~Gvil~elltG~~P~~ 642 (808)
. ..++.++|||||||++|+|++|++||.
T Consensus 161 ~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~ 217 (317)
T cd07868 161 LFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFH 217 (317)
T ss_pred ccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCcc
Confidence 2 125778999999999999999999985
No 202
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=99.98 E-value=3.9e-32 Score=287.40 Aligned_cols=213 Identities=23% Similarity=0.400 Sum_probs=170.5
Q ss_pred ccccCCceEEEEEEEC---------CeEEEEEEccCCC--CHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeec
Q 003594 469 LKCAGDWTNVYRGRLN---------HASVAIKTLNNGL--SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYM 535 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~~---------~~~vAiK~l~~~~--~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~ 535 (808)
.+|.|+||.||+|... ...||+|.+.... ..+.+..|+.++..++||||+++++++.. ..++||||+
T Consensus 2 ~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~ 81 (258)
T cd05078 2 SLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEYV 81 (258)
T ss_pred CCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEecC
Confidence 4688999999999872 2348889886322 23678899999999999999999999854 789999999
Q ss_pred CCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCcc--------EEE
Q 003594 536 PNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLV--------AKI 607 (808)
Q Consensus 536 ~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~--------~kl 607 (808)
++|+|.+++... ...+++..++.++.||+.||.|||+ ++|+||||||+|||++.++. +++
T Consensus 82 ~~g~L~~~l~~~---------~~~~~~~~~~~~~~qi~~~l~~lH~---~~iiH~dlkp~nili~~~~~~~~~~~~~~~l 149 (258)
T cd05078 82 KFGSLDTYLKKN---------KNLINISWKLEVAKQLAWALHFLED---KGLTHGNVCAKNVLLIREEDRKTGNPPFIKL 149 (258)
T ss_pred CCCcHHHHHhcC---------CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCccceEEEecccccccCCCceEEe
Confidence 999999999532 3468999999999999999999999 67999999999999987764 699
Q ss_pred EeCCCccc----------------------CCCCcchhhHhHHHHHHHHHcCC-CCchhhHHHhhhcHHHHHHHhccCCC
Q 003594 608 SGLGLNIC----------------------DQLNVRSDIRAFGTLLLHLLTGR-NWAGLVEKAMALDQTTLMQVLDGNAG 664 (808)
Q Consensus 608 ~DfGla~~----------------------~~~t~ksDVwS~Gvil~elltG~-~P~~~~~~~~~~~~~~~~~~ld~~~~ 664 (808)
+|||++.. ..++.++||||||+++|+|++|. +||...... ....... ...
T Consensus 150 ~d~g~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~------~~~~~~~-~~~ 222 (258)
T cd05078 150 SDPGISITVLPKEILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQ------KKLQFYE-DRH 222 (258)
T ss_pred cccccccccCCchhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHH------HHHHHHH-ccc
Confidence 99998742 13577899999999999999984 666542221 1111111 233
Q ss_pred CCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHH
Q 003594 665 IWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELD 702 (808)
Q Consensus 665 ~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~ 702 (808)
..|.....++.+|+.+||+.+ |..||++.++++.|+
T Consensus 223 ~~~~~~~~~~~~li~~~l~~~--p~~Rps~~~il~~l~ 258 (258)
T cd05078 223 QLPAPKWTELANLINQCMDYE--PDFRPSFRAIIRDLN 258 (258)
T ss_pred cCCCCCcHHHHHHHHHHhccC--hhhCCCHHHHHHhcC
Confidence 455556688999999999999 999999999998863
No 203
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=5.9e-32 Score=282.81 Aligned_cols=217 Identities=19% Similarity=0.273 Sum_probs=174.8
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEcc----CCCCHHHHHHHHHHHhccCCCCccceeecccc-------ceEEEEe
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLN----NGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE-------LKCIVFE 533 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~----~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-------~~~lV~E 533 (808)
.+.+|.|+||.|..+.+ +|..||||++. .....++..+|+.+|+.++|+||+.+++++.. ..|+|+|
T Consensus 27 ~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~DvYiV~e 106 (359)
T KOG0660|consen 27 IEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFNDVYLVFE 106 (359)
T ss_pred cccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccceeEEehh
Confidence 45678999999999998 68999999987 22335788999999999999999999998832 6799999
Q ss_pred ecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCc
Q 003594 534 YMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 613 (808)
Q Consensus 534 y~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla 613 (808)
+| +.+|...+ .....|+......++.||++||.|+|+.+ |+||||||+|+|++.+..+||+|||+|
T Consensus 107 lM-etDL~~ii----------k~~~~L~d~H~q~f~YQiLrgLKyiHSAn---ViHRDLKPsNll~n~~c~lKI~DFGLA 172 (359)
T KOG0660|consen 107 LM-ETDLHQII----------KSQQDLTDDHAQYFLYQILRGLKYIHSAN---VIHRDLKPSNLLLNADCDLKICDFGLA 172 (359)
T ss_pred HH-hhHHHHHH----------HcCccccHHHHHHHHHHHHHhcchhhccc---ccccccchhheeeccCCCEEeccccce
Confidence 99 58999999 34556999999999999999999999954 999999999999999999999999999
Q ss_pred cc----------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHH------------------
Q 003594 614 IC----------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKA------------------ 647 (808)
Q Consensus 614 ~~----------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~------------------ 647 (808)
+. ..||...||||.||||.||++|++-|...+..
T Consensus 173 R~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e~l 252 (359)
T KOG0660|consen 173 RYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEEDL 252 (359)
T ss_pred eeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHHHH
Confidence 65 35899999999999999999999987532110
Q ss_pred hhhcHHHHHHHhcc--CCCCCC-----hhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 648 MALDQTTLMQVLDG--NAGIWP-----LDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 648 ~~~~~~~~~~~ld~--~~~~~p-----~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
...........+.. ..+..| +...+...+|+.+||..| |.+|+|+.|.+.
T Consensus 253 ~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fd--P~kRita~eAL~ 309 (359)
T KOG0660|consen 253 QKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFD--PKKRITAEEALA 309 (359)
T ss_pred HHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccC--ccccCCHHHHhc
Confidence 00111111122221 111111 256788999999999999 999999998875
No 204
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.97 E-value=1.2e-31 Score=287.76 Aligned_cols=221 Identities=21% Similarity=0.292 Sum_probs=180.3
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccCCCC---HHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGN 539 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gs 539 (808)
.+.+|.|+||.||++.+ +|..||+|.+..... ...+.+|+.++.+++||||+++++++.. ..++||||+++++
T Consensus 6 ~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~ 85 (286)
T cd06622 6 LDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEYMDAGS 85 (286)
T ss_pred hhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEeecCCCC
Confidence 35568999999999998 589999999873322 3578899999999999999999998854 7899999999999
Q ss_pred HHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc----
Q 003594 540 LRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC---- 615 (808)
Q Consensus 540 L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~---- 615 (808)
|..++... .....+++..+..++.|++.||.|||+. .+|+||||||+||+++.++.+||+|||++..
T Consensus 86 l~~~~~~~-------~~~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 156 (286)
T cd06622 86 LDKLYAGG-------VATEGIPEDVLRRITYAVVKGLKFLKEE--HNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS 156 (286)
T ss_pred HHHHHHhc-------cccCCCCHHHHHHHHHHHHHHHHHHHhc--CCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC
Confidence 99988532 1234789999999999999999999963 3699999999999999999999999998742
Q ss_pred -------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhh
Q 003594 616 -------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDL 670 (808)
Q Consensus 616 -------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~ 670 (808)
..++.++|||||||++|+|++|+.||...... .....+..+........|..+
T Consensus 157 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 234 (286)
T cd06622 157 LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYA--NIFAQLSAIVDGDPPTLPSGY 234 (286)
T ss_pred ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchh--hHHHHHHHHhhcCCCCCCccc
Confidence 01367899999999999999999998643211 111223344444455566778
Q ss_pred HHHHHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 671 AEELAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 671 ~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
+.++.+++.+||+.+ |..||++.+++..
T Consensus 235 ~~~~~~li~~~l~~~--p~~Rp~~~~l~~~ 262 (286)
T cd06622 235 SDDAQDFVAKCLNKI--PNRRPTYAQLLEH 262 (286)
T ss_pred CHHHHHHHHHHcccC--cccCCCHHHHhcC
Confidence 899999999999999 9999999888863
No 205
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.97 E-value=1.4e-31 Score=288.67 Aligned_cols=225 Identities=22% Similarity=0.368 Sum_probs=176.8
Q ss_pred cccccCCceEEEEEEECC------------------eEEEEEEccCCCC---HHHHHHHHHHHhccCCCCccceeecccc
Q 003594 468 RLKCAGDWTNVYRGRLNH------------------ASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE 526 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~~~------------------~~vAiK~l~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~ 526 (808)
+.+|+|+||.||++.+.+ ..||+|.+..... .+.|.+|+.++.+++||||++++++|..
T Consensus 11 ~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~ 90 (296)
T cd05051 11 EKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIARLLGVCTV 90 (296)
T ss_pred ccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeEEEEEEec
Confidence 556899999999988732 4589999884432 4678899999999999999999999865
Q ss_pred --ceEEEEeecCCCCHHHHHhhccccccc-cccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCc
Q 003594 527 --LKCIVFEYMPNGNLRDKLFTSQRNYKN-CSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNL 603 (808)
Q Consensus 527 --~~~lV~Ey~~~gsL~~~l~~~~~~~~~-~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~ 603 (808)
..++||||+++++|.+++......... ......+++..++.++.|++.||.|||+ .+|+||||||+|||++.++
T Consensus 91 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~---~~i~H~dlkp~Nili~~~~ 167 (296)
T cd05051 91 DPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLES---LNFVHRDLATRNCLVGKNY 167 (296)
T ss_pred CCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHH---cCccccccchhceeecCCC
Confidence 789999999999999999654210000 0122368999999999999999999999 5699999999999999999
Q ss_pred cEEEEeCCCccc---------------------------CCCCcchhhHhHHHHHHHHHc--CCCCchhhHHHhhhcHHH
Q 003594 604 VAKISGLGLNIC---------------------------DQLNVRSDIRAFGTLLLHLLT--GRNWAGLVEKAMALDQTT 654 (808)
Q Consensus 604 ~~kl~DfGla~~---------------------------~~~t~ksDVwS~Gvil~ellt--G~~P~~~~~~~~~~~~~~ 654 (808)
.++|+|||++.. ..++.++|||||||++|+|++ |.+||..... ...
T Consensus 168 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~-----~~~ 242 (296)
T cd05051 168 TIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTD-----QQV 242 (296)
T ss_pred ceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcCh-----HHH
Confidence 999999998752 245788999999999999998 6677764321 111
Q ss_pred HHHHhc-------cCCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHH
Q 003594 655 LMQVLD-------GNAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELD 702 (808)
Q Consensus 655 ~~~~ld-------~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~ 702 (808)
+..... ......+..++.++.+|+.+||+.| |..||++.+|++.|+
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~--p~~Rpt~~el~~~L~ 295 (296)
T cd05051 243 IENAGHFFRDDGRQIYLPRPPNCPKDIYELMLECWRRD--EEDRPTFREIHLFLQ 295 (296)
T ss_pred HHHHHhccccccccccCCCccCCCHHHHHHHHHHhccC--hhcCCCHHHHHHHhc
Confidence 111111 1112334456789999999999999 999999999998875
No 206
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.97 E-value=1.5e-31 Score=291.01 Aligned_cols=218 Identities=19% Similarity=0.287 Sum_probs=169.7
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccC---CCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNN---GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGN 539 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~---~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gs 539 (808)
.+.+|.|+||.||+|.+ ++..||+|.+.. ......+.+|+.++++++||||+++++++.. ..++||||++ ++
T Consensus 11 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~ 89 (309)
T cd07872 11 LEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEYLD-KD 89 (309)
T ss_pred EEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeCCC-CC
Confidence 45678999999999998 578999999872 2233568899999999999999999999854 7899999997 58
Q ss_pred HHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc----
Q 003594 540 LRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC---- 615 (808)
Q Consensus 540 L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~---- 615 (808)
|.+++.. ....+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||++..
T Consensus 90 l~~~~~~---------~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 157 (309)
T cd07872 90 LKQYMDD---------CGNIMSMHNVKIFLYQILRGLAYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKSVP 157 (309)
T ss_pred HHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECccccceecCCC
Confidence 8888843 23458999999999999999999999 5699999999999999999999999998742
Q ss_pred ----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhh----------cHHHHHHHh----
Q 003594 616 ----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMAL----------DQTTLMQVL---- 659 (808)
Q Consensus 616 ----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~----------~~~~~~~~l---- 659 (808)
..++.++|||||||++|+|+||++||......... ....+..+.
T Consensus 158 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (309)
T cd07872 158 TKTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSNDE 237 (309)
T ss_pred ccccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchhh
Confidence 13577899999999999999999998542110000 000000000
Q ss_pred --ccCCC--------CCChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 660 --DGNAG--------IWPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 660 --d~~~~--------~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
+...+ .....++.++.+|+.+||..| |++|||+.+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d--p~~R~t~~e~l~ 285 (309)
T cd07872 238 FKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYE--SKKRISAEEAMK 285 (309)
T ss_pred hhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCC--hhhCCCHHHHhc
Confidence 00000 011245678999999999999 999999999875
No 207
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.97 E-value=3e-32 Score=299.30 Aligned_cols=212 Identities=17% Similarity=0.223 Sum_probs=172.5
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCC-----CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCC
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNG-----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNG 538 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~g 538 (808)
..+|.|+||.||++.. +|..||||+++.. .....+.+|+.++..++||||+++++++.+ ..+|||||+++|
T Consensus 7 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 86 (330)
T cd05601 7 SLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVMEYQPGG 86 (330)
T ss_pred EEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEECCCCCC
Confidence 4568999999999998 6789999999732 123568889999999999999999998865 789999999999
Q ss_pred CHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc---
Q 003594 539 NLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC--- 615 (808)
Q Consensus 539 sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~--- 615 (808)
+|.+++... ...+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||++..
T Consensus 87 ~L~~~l~~~---------~~~l~~~~~~~~~~qi~~aL~~lH~---~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~ 154 (330)
T cd05601 87 DLLSLLNRY---------EDQFDEDMAQFYLAELVLAIHSVHQ---MGYVHRDIKPENVLIDRTGHIKLADFGSAARLTA 154 (330)
T ss_pred CHHHHHHHh---------cCCCCHHHHHHHHHHHHHHHHHHHH---CCeEcccCchHheEECCCCCEEeccCCCCeECCC
Confidence 999999532 3569999999999999999999999 6699999999999999999999999998742
Q ss_pred -----------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhcc-CCCC
Q 003594 616 -----------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDG-NAGI 665 (808)
Q Consensus 616 -----------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~-~~~~ 665 (808)
..++.++|||||||++|+|++|+.||..... ...+..++.. ....
T Consensus 155 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~-----~~~~~~i~~~~~~~~ 229 (330)
T cd05601 155 NKMVNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTS-----AKTYNNIMNFQRFLK 229 (330)
T ss_pred CCceeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCH-----HHHHHHHHcCCCccC
Confidence 1245789999999999999999999964321 1222333322 1112
Q ss_pred CC--hhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 666 WP--LDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 666 ~p--~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
+| ...+..+.+|+.+||. + |.+||++.+++.
T Consensus 230 ~~~~~~~~~~~~~li~~ll~-~--p~~R~t~~~l~~ 262 (330)
T cd05601 230 FPEDPKVSSDFLDLIQSLLC-G--QKERLGYEGLCC 262 (330)
T ss_pred CCCCCCCCHHHHHHHHHHcc-C--hhhCCCHHHHhC
Confidence 22 3567899999999997 8 899999888763
No 208
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.97 E-value=1.9e-31 Score=282.90 Aligned_cols=212 Identities=22% Similarity=0.351 Sum_probs=175.6
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCCC--C---------HHHHHHHHHHHhccCCCCccceeecccc--ceEEEE
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNGL--S---------EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVF 532 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~--~---------~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~ 532 (808)
.++|.|+||.||+|.. ++..||+|.+.... . .+.+.+|+.++++++||||+++++++.+ ..++||
T Consensus 6 ~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 85 (267)
T cd06628 6 ALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADHLNIFL 85 (267)
T ss_pred ceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCccEEEE
Confidence 4568899999999997 57899999886221 1 1458889999999999999999999865 788999
Q ss_pred eecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCC
Q 003594 533 EYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 612 (808)
Q Consensus 533 Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGl 612 (808)
||+++++|.+++. ....+++..+..++.|++.||.|||+ .+++||||+|+||+++.++.+||+|||+
T Consensus 86 e~~~~~~L~~~l~----------~~~~l~~~~~~~~~~~l~~~l~~lH~---~~ivH~di~p~nil~~~~~~~~l~dfg~ 152 (267)
T cd06628 86 EYVPGGSVAALLN----------NYGAFEETLVRNFVRQILKGLNYLHN---RGIIHRDIKGANILVDNKGGIKISDFGI 152 (267)
T ss_pred EecCCCCHHHHHH----------hccCccHHHHHHHHHHHHHHHHHHHh---cCcccccCCHHHEEEcCCCCEEecccCC
Confidence 9999999999994 34568999999999999999999999 5699999999999999999999999997
Q ss_pred ccc-------------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhcc
Q 003594 613 NIC-------------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDG 661 (808)
Q Consensus 613 a~~-------------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~ 661 (808)
++. ..++.++|||||||++|+|++|+.||..... ......+...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~ 227 (267)
T cd06628 153 SKKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQ-----LQAIFKIGEN 227 (267)
T ss_pred CcccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccH-----HHHHHHHhcc
Confidence 632 1245689999999999999999999975322 1222233333
Q ss_pred CCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 662 NAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 662 ~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
..+..|...+..+.+++.+||+.| |..||++.++++
T Consensus 228 ~~~~~~~~~~~~~~~li~~~l~~~--p~~Rp~~~~il~ 263 (267)
T cd06628 228 ASPEIPSNISSEAIDFLEKTFEID--HNKRPTAAELLK 263 (267)
T ss_pred CCCcCCcccCHHHHHHHHHHccCC--chhCcCHHHHhh
Confidence 444566678899999999999999 999999988875
No 209
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.97 E-value=2.2e-31 Score=293.07 Aligned_cols=231 Identities=22% Similarity=0.338 Sum_probs=184.5
Q ss_pred ccccccCCceEEEEEEEC---------CeEEEEEEccCCCC---HHHHHHHHHHHhcc-CCCCccceeecccc--ceEEE
Q 003594 467 FRLKCAGDWTNVYRGRLN---------HASVAIKTLNNGLS---EEDFQAKVSFLTAV-RHPHLVAVMGCCSE--LKCIV 531 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~~---------~~~vAiK~l~~~~~---~~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~~~lV 531 (808)
.+.+|+|+||.||++... +..||+|.+..... ...+.+|+.++.++ +||||++++++|.+ ..++|
T Consensus 17 ~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 96 (334)
T cd05100 17 GKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVL 96 (334)
T ss_pred cceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCCceEEE
Confidence 456789999999999752 23699999874322 35788999999999 89999999999865 68999
Q ss_pred EeecCCCCHHHHHhhccccccc------cccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccE
Q 003594 532 FEYMPNGNLRDKLFTSQRNYKN------CSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVA 605 (808)
Q Consensus 532 ~Ey~~~gsL~~~l~~~~~~~~~------~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~ 605 (808)
|||+++|+|.+++......... ......++|..++.++.||+.||.|||+ .+|+||||||+|||++.++.+
T Consensus 97 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~---~givH~dlkp~Nill~~~~~~ 173 (334)
T cd05100 97 VEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLAS---QKCIHRDLAARNVLVTEDNVM 173 (334)
T ss_pred EecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHH---CCeeccccccceEEEcCCCcE
Confidence 9999999999999653210000 0123468999999999999999999999 569999999999999999999
Q ss_pred EEEeCCCccc---------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHH
Q 003594 606 KISGLGLNIC---------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQ 657 (808)
Q Consensus 606 kl~DfGla~~---------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~ 657 (808)
||+|||+++. ..++.++||||||+++|||++ |.+||..... ......
T Consensus 174 kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~-----~~~~~~ 248 (334)
T cd05100 174 KIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV-----EELFKL 248 (334)
T ss_pred EECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCCH-----HHHHHH
Confidence 9999998752 135678999999999999998 8888854211 122223
Q ss_pred HhccCCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHHHHh
Q 003594 658 VLDGNAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVRKK 707 (808)
Q Consensus 658 ~ld~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~~~ 707 (808)
+........+..++..+.+|+.+||+.+ |..||++.+++..|+.+...
T Consensus 249 ~~~~~~~~~~~~~~~~l~~li~~cl~~~--p~~Rps~~ell~~l~~~~~~ 296 (334)
T cd05100 249 LKEGHRMDKPANCTHELYMIMRECWHAV--PSQRPTFKQLVEDLDRVLTV 296 (334)
T ss_pred HHcCCCCCCCCCCCHHHHHHHHHHcccC--hhhCcCHHHHHHHHHHHhhh
Confidence 3334444556677889999999999999 99999999999999988754
No 210
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=1.5e-31 Score=289.28 Aligned_cols=212 Identities=18% Similarity=0.263 Sum_probs=173.2
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccC--CCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCHH
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNN--GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNLR 541 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~--~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL~ 541 (808)
+.+|.|+||.||+|.. ++..||+|.+.. ....+.+.+|+.+++.++||||++++++|.. ..|+||||+++++|.
T Consensus 26 ~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (296)
T cd06654 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 105 (296)
T ss_pred EEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeecccCCCCHH
Confidence 4568899999999997 678999999873 2334678899999999999999999998854 789999999999999
Q ss_pred HHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc------
Q 003594 542 DKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC------ 615 (808)
Q Consensus 542 ~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~------ 615 (808)
+++.. ..+++..+..++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||++..
T Consensus 106 ~~~~~-----------~~~~~~~~~~i~~ql~~aL~~LH~---~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~ 171 (296)
T cd06654 106 DVVTE-----------TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 171 (296)
T ss_pred HHHHh-----------cCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEcCCCCEEECccccchhcccccc
Confidence 99832 347899999999999999999999 6699999999999999999999999998642
Q ss_pred -------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhcc-CCCCCChhhHHHHH
Q 003594 616 -------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDG-NAGIWPLDLAEELA 675 (808)
Q Consensus 616 -------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~-~~~~~p~~~~~~l~ 675 (808)
..++.++|||||||++|+|++|++||...... .........+ .....+...+..+.
T Consensus 172 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~ 247 (296)
T cd06654 172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL----RALYLIATNGTPELQNPEKLSAIFR 247 (296)
T ss_pred ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHH----HhHHHHhcCCCCCCCCccccCHHHH
Confidence 23568899999999999999999999653211 0111111111 11223456778899
Q ss_pred HHHHHhhccCCCcCccccHHhhHH
Q 003594 676 GIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 676 ~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
+++.+||..+ |..||++.+++.
T Consensus 248 ~li~~~l~~~--p~~Rpt~~eil~ 269 (296)
T cd06654 248 DFLNRCLDMD--VEKRGSAKELLQ 269 (296)
T ss_pred HHHHHHCcCC--cccCcCHHHHhh
Confidence 9999999999 999999999986
No 211
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=3.5e-32 Score=300.70 Aligned_cols=217 Identities=23% Similarity=0.362 Sum_probs=185.5
Q ss_pred ccccccCCceEEEEEEEC---C--eEEEEEEccCC---CCHHHHHHHHHHHhccCCCCccceeecccc-ceEEEEeecCC
Q 003594 467 FRLKCAGDWTNVYRGRLN---H--ASVAIKTLNNG---LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE-LKCIVFEYMPN 537 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~~---~--~~vAiK~l~~~---~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-~~~lV~Ey~~~ 537 (808)
++++|.|.||.|++|.|+ | ..||||.++.. ....+|.+|+.+|.+|+|||+|+|||+..+ ...||||+++.
T Consensus 115 ~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~qp~mMV~ELapl 194 (1039)
T KOG0199|consen 115 YELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLDQPAMMVFELAPL 194 (1039)
T ss_pred HHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeeccchhhHHhhhccc
Confidence 467899999999999993 3 57999999833 245899999999999999999999999986 77899999999
Q ss_pred CCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--
Q 003594 538 GNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-- 615 (808)
Q Consensus 538 gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-- 615 (808)
|||.+.|+.. ....|.......++.|||.|+.||.+ +++|||||-..|+||-..-.+||+||||.+.
T Consensus 195 GSLldrLrka--------~~~~llv~~Lcdya~QiA~aM~YLes---krlvHRDLAARNlllasprtVKI~DFGLmRaLg 263 (1039)
T KOG0199|consen 195 GSLLDRLRKA--------KKAILLVSRLCDYAMQIAKAMQYLES---KRLVHRDLAARNLLLASPRTVKICDFGLMRALG 263 (1039)
T ss_pred chHHHHHhhc--------cccceeHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhhhheecccceeeeecccceeccC
Confidence 9999999752 45678888999999999999999999 7799999999999999999999999999864
Q ss_pred --------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCCCCCCh
Q 003594 616 --------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNAGIWPL 668 (808)
Q Consensus 616 --------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~ 668 (808)
..++.+||||+|||+||||+| |..||-.... ...+..+-++.+...|.
T Consensus 264 ~ned~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g-----~qIL~~iD~~erLpRPk 338 (1039)
T KOG0199|consen 264 ENEDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG-----IQILKNIDAGERLPRPK 338 (1039)
T ss_pred CCCcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCH-----HHHHHhccccccCCCCC
Confidence 347899999999999999999 6666644221 22333333456778889
Q ss_pred hhHHHHHHHHHHhhccCCCcCccccHHhhHHHH
Q 003594 669 DLAEELAGIALKCLSADQDANRDLRIAGVMKEL 701 (808)
Q Consensus 669 ~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L 701 (808)
.|++++++++..||..+ |.+||++..|.+.+
T Consensus 339 ~csedIY~imk~cWah~--paDRptFsair~~~ 369 (1039)
T KOG0199|consen 339 YCSEDIYQIMKNCWAHN--PADRPTFSAIREDL 369 (1039)
T ss_pred CChHHHHHHHHHhccCC--ccccccHHHHHHhH
Confidence 99999999999999999 99999999997554
No 212
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.97 E-value=2e-31 Score=285.02 Aligned_cols=216 Identities=19% Similarity=0.300 Sum_probs=177.9
Q ss_pred cccccccccCCceEEEEEEE--CCeEEEEEEccCCC---CHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecC
Q 003594 464 SERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNGL---SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMP 536 (808)
Q Consensus 464 ~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~---~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~ 536 (808)
+...+.+|.|+||.||+|.+ ++..||||.+.... ....+.+|+.++++++||||+++++++.+ ..++||||++
T Consensus 6 y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06640 6 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYLG 85 (277)
T ss_pred hhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecCC
Confidence 33446678999999999998 57899999987332 23578899999999999999999999865 7899999999
Q ss_pred CCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-
Q 003594 537 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC- 615 (808)
Q Consensus 537 ~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~- 615 (808)
+|+|.+++. ...+++.....++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++..
T Consensus 86 ~~~L~~~i~-----------~~~l~~~~~~~~~~~l~~~l~~lh~---~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~ 151 (277)
T cd06640 86 GGSALDLLR-----------AGPFDEFQIATMLKEILKGLDYLHS---EKKIHRDIKAANVLLSEQGDVKLADFGVAGQL 151 (277)
T ss_pred CCcHHHHHh-----------cCCCCHHHHHHHHHHHHHHHHHHHh---CCccCcCCChhhEEEcCCCCEEEcccccceec
Confidence 999999983 2358899999999999999999999 5699999999999999999999999998732
Q ss_pred ------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhH
Q 003594 616 ------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLA 671 (808)
Q Consensus 616 ------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~ 671 (808)
..++.++|||||||++|+|+||.+||..... ......+........+..++
T Consensus 152 ~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 226 (277)
T cd06640 152 TDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHP-----MRVLFLIPKNNPPTLTGEFS 226 (277)
T ss_pred cCCccccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcCh-----HhHhhhhhcCCCCCCchhhh
Confidence 2356789999999999999999999864321 11111122223344556788
Q ss_pred HHHHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 672 EELAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 672 ~~l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
..+.+++.+||+.+ |..||++.+++..
T Consensus 227 ~~~~~li~~~l~~~--p~~Rp~~~~il~~ 253 (277)
T cd06640 227 KPFKEFIDACLNKD--PSFRPTAKELLKH 253 (277)
T ss_pred HHHHHHHHHHcccC--cccCcCHHHHHhC
Confidence 99999999999999 9999999999765
No 213
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.97 E-value=2.2e-31 Score=286.67 Aligned_cols=232 Identities=19% Similarity=0.240 Sum_probs=185.8
Q ss_pred cCHHHHHHhhccccccccccccCCceEEEEEEE--CCeEEEEEEccCC-CCHHHHHHHHHHHhcc-CCCCccceeecccc
Q 003594 451 YAAEDIRLATEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNG-LSEEDFQAKVSFLTAV-RHPHLVAVMGCCSE 526 (808)
Q Consensus 451 ~~~~ei~~at~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~ 526 (808)
+++.++..++++|.... .+|.|+||.||++.. +++.+|+|++... .....+.+|+.++.++ +|||+++++++|..
T Consensus 12 ~~~~~~~~~~~~y~~~~-~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~ 90 (291)
T cd06639 12 LGLESLGDPTDTWEIIE-TIGKGTYGKVYKVTNKKDGSLAAVKILDPISDVDEEIEAEYNILQSLPNHPNVVKFYGMFYK 90 (291)
T ss_pred hhcccCCCCCCCeEEEE-EeecCCCeEEEEEEECCCCCEEEEEEecccccHHHHHHHHHHHHHHhcCCCCeEEEEEEEEe
Confidence 55677778888887765 457899999999998 5789999998743 3356788999999999 89999999999843
Q ss_pred -------ceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCccc
Q 003594 527 -------LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILL 599 (808)
Q Consensus 527 -------~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILl 599 (808)
..++||||+++|+|.+++.... .....+++..++.++.|++.||.|||+ .+|+||||||+||++
T Consensus 91 ~~~~~~~~~~lv~ey~~~~sL~~~~~~~~------~~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dlkp~nili 161 (291)
T cd06639 91 ADKLVGGQLWLVLELCNGGSVTELVKGLL------ICGQRLDEAMISYILYGALLGLQHLHN---NRIIHRDVKGNNILL 161 (291)
T ss_pred ccccCCCeeEEEEEECCCCcHHHHHHHhh------hcCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEE
Confidence 4799999999999999985431 234568999999999999999999999 569999999999999
Q ss_pred CCCccEEEEeCCCccc--------------------C----------CCCcchhhHhHHHHHHHHHcCCCCchhhHHHhh
Q 003594 600 DRNLVAKISGLGLNIC--------------------D----------QLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMA 649 (808)
Q Consensus 600 d~~~~~kl~DfGla~~--------------------~----------~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~ 649 (808)
+.++.+||+|||++.. + .++.++|||||||++|+|++|++||.....
T Consensus 162 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~--- 238 (291)
T cd06639 162 TTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHP--- 238 (291)
T ss_pred cCCCCEEEeecccchhcccccccccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcH---
Confidence 9999999999998642 0 146789999999999999999999865322
Q ss_pred hcHHHHHHHhccCC--CCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 650 LDQTTLMQVLDGNA--GIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 650 ~~~~~~~~~ld~~~--~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
...+..+..... ...+...+..+.+|+.+||+.+ |..||++.+++.
T Consensus 239 --~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~--p~~Rps~~~il~ 286 (291)
T cd06639 239 --VKTLFKIPRNPPPTLLHPEKWCRSFNHFISQCLIKD--FEARPSVTHLLE 286 (291)
T ss_pred --HHHHHHHhcCCCCCCCcccccCHHHHHHHHHHhhcC--hhhCcCHHHHhc
Confidence 111222222111 1123456678999999999999 999999999875
No 214
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.97 E-value=4e-32 Score=298.40 Aligned_cols=209 Identities=20% Similarity=0.209 Sum_probs=165.9
Q ss_pred cccCCceEEEEEEE--CCeEEEEEEccCC-----CCHHHHHHHHHHHhcc---CCCCccceeecccc--ceEEEEeecCC
Q 003594 470 KCAGDWTNVYRGRL--NHASVAIKTLNNG-----LSEEDFQAKVSFLTAV---RHPHLVAVMGCCSE--LKCIVFEYMPN 537 (808)
Q Consensus 470 ~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-----~~~~~~~~Ei~il~~l---~HpnIv~l~g~~~~--~~~lV~Ey~~~ 537 (808)
+|.|+||.||+|.. +|..||||++... .....+..|..++..+ +||||+++++++.+ ..|+||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 47899999999998 5799999998621 1223455677777665 69999999999865 78999999999
Q ss_pred CCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--
Q 003594 538 GNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-- 615 (808)
Q Consensus 538 gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-- 615 (808)
|+|.+++. ....+++..+..|+.||+.||.|||+ .+|+||||||+|||++.++.+||+|||++..
T Consensus 81 g~L~~~l~----------~~~~~~~~~~~~~~~qil~al~~LH~---~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~ 147 (330)
T cd05586 81 GELFWHLQ----------KEGRFSEDRAKFYIAELVLALEHLHK---YDIVYRDLKPENILLDATGHIALCDFGLSKANL 147 (330)
T ss_pred ChHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEeccCCHHHeEECCCCCEEEecCCcCcCCC
Confidence 99999984 44568999999999999999999999 5699999999999999999999999998742
Q ss_pred ------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCC-hhh
Q 003594 616 ------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWP-LDL 670 (808)
Q Consensus 616 ------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p-~~~ 670 (808)
..++.++|||||||++|+|+||+.||..... ...+..+.... ..+| ..+
T Consensus 148 ~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~-----~~~~~~i~~~~-~~~~~~~~ 221 (330)
T cd05586 148 TDNKTTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDT-----QQMYRNIAFGK-VRFPKNVL 221 (330)
T ss_pred CCCCCccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCH-----HHHHHHHHcCC-CCCCCccC
Confidence 1367889999999999999999999865321 11222222222 2223 246
Q ss_pred HHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 671 AEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 671 ~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
+..+.+++.+||..| |..||++.+.+.
T Consensus 222 ~~~~~~li~~~L~~~--P~~R~~~~~~~~ 248 (330)
T cd05586 222 SDEGRQFVKGLLNRN--PQHRLGAHRDAV 248 (330)
T ss_pred CHHHHHHHHHHcCCC--HHHCCCCCCCHH
Confidence 789999999999999 999996544333
No 215
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=2.4e-31 Score=281.24 Aligned_cols=209 Identities=22% Similarity=0.285 Sum_probs=176.5
Q ss_pred ccccccCCceEEEEEEECC--eEEEEEEccCC-----CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCC
Q 003594 467 FRLKCAGDWTNVYRGRLNH--ASVAIKTLNNG-----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPN 537 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~~~--~~vAiK~l~~~-----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~ 537 (808)
++.+|.|.-|+||++.+.| ..+|+|++... ....+.+.|-+||+.++||.+++||+.|.. ..|||||||+|
T Consensus 82 lk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~meyCpG 161 (459)
T KOG0610|consen 82 LKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVMEYCPG 161 (459)
T ss_pred HHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEEecCCC
Confidence 4667899999999999955 79999999832 123467789999999999999999999965 78999999999
Q ss_pred CCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--
Q 003594 538 GNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-- 615 (808)
Q Consensus 538 gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-- 615 (808)
|+|..+++.. ....+++..+..++.+|+.||+|||. .|||.|||||+||||-++|++.|+||.|+..
T Consensus 162 GdL~~LrqkQ--------p~~~fse~~aRFYaAEvl~ALEYLHm---lGivYRDLKPENILvredGHIMLsDFDLS~~~~ 230 (459)
T KOG0610|consen 162 GDLHSLRQKQ--------PGKRFSESAARFYAAEVLLALEYLHM---LGIVYRDLKPENILVREDGHIMLSDFDLSLRCP 230 (459)
T ss_pred ccHHHHHhhC--------CCCccchhhHHHHHHHHHHHHHHHHh---hceeeccCCcceeEEecCCcEEeeeccccccCC
Confidence 9999988643 56789999999999999999999999 6799999999999999999999999998621
Q ss_pred -------------------------------------------------------------------------------C
Q 003594 616 -------------------------------------------------------------------------------D 616 (808)
Q Consensus 616 -------------------------------------------------------------------------------~ 616 (808)
.
T Consensus 231 ~~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~ 310 (459)
T KOG0610|consen 231 VSPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGE 310 (459)
T ss_pred CCCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecC
Confidence 1
Q ss_pred CCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccC-CCCCChhhHHHHHHHHHHhhccCCCcCcccc
Q 003594 617 QLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGN-AGIWPLDLAEELAGIALKCLSADQDANRDLR 693 (808)
Q Consensus 617 ~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~-~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps 693 (808)
+.+.++|+|+|||+||||+.|..||... ....++..++... ..+-.+..+..+.+||.+.|.+| |.+|..
T Consensus 311 GHgsAVDWWtfGIflYEmLyG~TPFKG~-----~~~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKd--P~kRlg 381 (459)
T KOG0610|consen 311 GHGSAVDWWTFGIFLYEMLYGTTPFKGS-----NNKETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKD--PSKRLG 381 (459)
T ss_pred CCCchhhHHHHHHHHHHHHhCCCCcCCC-----CchhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccC--hhhhhc
Confidence 2467899999999999999999999764 4456677776542 11222267889999999999999 999987
No 216
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.97 E-value=2.4e-31 Score=282.03 Aligned_cols=212 Identities=19% Similarity=0.342 Sum_probs=174.3
Q ss_pred cccccCCceEEEEEEE-CCeEEEEEEccCCC-C-------HHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecC
Q 003594 468 RLKCAGDWTNVYRGRL-NHASVAIKTLNNGL-S-------EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMP 536 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~-~~~~vAiK~l~~~~-~-------~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~ 536 (808)
+.+|.|+||.||+|.. +|..+|||.+.... . ...+.+|+++++.++||||++++++|.+ ..++||||++
T Consensus 6 ~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 85 (265)
T cd06631 6 EVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIFMEFVP 85 (265)
T ss_pred ceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEEEecCC
Confidence 4578999999999988 67899999987221 1 2458899999999999999999999965 7899999999
Q ss_pred CCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-
Q 003594 537 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC- 615 (808)
Q Consensus 537 ~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~- 615 (808)
+++|.+++. ....+++..+..++.|++.||.|||+ .+|+|+||+|+||+++.++.++|+|||++..
T Consensus 86 ~~~L~~~l~----------~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 152 (265)
T cd06631 86 GGSISSILN----------RFGPLPEPVFCKYTKQILDGVAYLHN---NCVVHRDIKGNNVMLMPNGIIKLIDFGCARRL 152 (265)
T ss_pred CCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHhEEECCCCeEEeccchhhHhh
Confidence 999999994 33468999999999999999999999 5699999999999999999999999997632
Q ss_pred ------------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhc--cCC
Q 003594 616 ------------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLD--GNA 663 (808)
Q Consensus 616 ------------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld--~~~ 663 (808)
..++.++||||||+++|+|++|.+||...... .....+.. ...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~ 227 (265)
T cd06631 153 AWVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRL-----AAMFYIGAHRGLM 227 (265)
T ss_pred hhccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChH-----HHHHHhhhccCCC
Confidence 12467899999999999999999999653221 11111111 123
Q ss_pred CCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 664 GIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 664 ~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
+..+..++..+.+++.+||..+ |..||++.+++.
T Consensus 228 ~~~~~~~~~~~~~~i~~~l~~~--p~~Rp~~~~~l~ 261 (265)
T cd06631 228 PRLPDSFSAAAIDFVTSCLTRD--QHERPSALQLLR 261 (265)
T ss_pred CCCCCCCCHHHHHHHHHHhcCC--cccCCCHHHHhc
Confidence 3455678899999999999999 999999988874
No 217
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.97 E-value=1.4e-31 Score=299.20 Aligned_cols=218 Identities=20% Similarity=0.255 Sum_probs=170.6
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccCC----CCHHHHHHHHHHHhccCCCCccceeecccc-------ceEEEEe
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNNG----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE-------LKCIVFE 533 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-------~~~lV~E 533 (808)
.+.+|.|+||.||++.. +|+.||||++... .....+.+|+.+++.++||||+++++++.. ..|+|||
T Consensus 5 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~lv~e 84 (372)
T cd07853 5 DRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIYVVTE 84 (372)
T ss_pred cceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEEEEee
Confidence 35678999999999997 6899999998632 123578899999999999999999999854 4689999
Q ss_pred ecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCc
Q 003594 534 YMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 613 (808)
Q Consensus 534 y~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla 613 (808)
|+. ++|.+++. ....+++..+..|+.||+.||.|||+ .+|+||||||+|||++.++.+||+|||++
T Consensus 85 ~~~-~~l~~~~~----------~~~~l~~~~~~~~~~qi~~aL~~LH~---~~ivH~dlkp~Nili~~~~~~kL~Dfg~a 150 (372)
T cd07853 85 LMQ-SDLHKIIV----------SPQPLSSDHVKVFLYQILRGLKYLHS---AGILHRDIKPGNLLVNSNCVLKICDFGLA 150 (372)
T ss_pred ccc-cCHHHHHh----------cCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCChHHEEECCCCCEEeccccce
Confidence 996 68888883 44579999999999999999999999 56999999999999999999999999987
Q ss_pred cc---------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhc---------------
Q 003594 614 IC---------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALD--------------- 651 (808)
Q Consensus 614 ~~---------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~--------------- 651 (808)
.. ..++.++|||||||++|||++|++||..........
T Consensus 151 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~ 230 (372)
T cd07853 151 RVEEPDESKHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMR 230 (372)
T ss_pred eecccCccccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHH
Confidence 42 125778999999999999999999985422110000
Q ss_pred ---HHHHHHHhc-cCCC-------CCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 652 ---QTTLMQVLD-GNAG-------IWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 652 ---~~~~~~~ld-~~~~-------~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
......+.. +... ......++++.+|+.+||+.| |..|||+.+++..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~d--P~~R~t~~e~l~h 288 (372)
T cd07853 231 SACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFD--PDKRISAADALAH 288 (372)
T ss_pred HhhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCC--hhhCcCHHHHhcC
Confidence 000001111 0000 122345678999999999999 9999999998764
No 218
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.97 E-value=3.8e-31 Score=278.75 Aligned_cols=215 Identities=21% Similarity=0.355 Sum_probs=176.7
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccCC----CCHHHHHHHHHHHhccCCCCccceeecccc---ceEEEEeecCC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNNG----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE---LKCIVFEYMPN 537 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~---~~~lV~Ey~~~ 537 (808)
.+++|.|+||.||++.. ++..||+|.+... ...+.+.+|+.++++++|||++++++.+.. ..++||||+++
T Consensus 5 ~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~~~ 84 (257)
T cd08223 5 VRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMGFCEG 84 (257)
T ss_pred EEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEecccCC
Confidence 45678999999999998 5689999998722 223568899999999999999999988753 46899999999
Q ss_pred CCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--
Q 003594 538 GNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-- 615 (808)
Q Consensus 538 gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-- 615 (808)
++|.+++... ....+++.+++.++.+++.||.|||+ .+|+||||||+||+++.++.++|+|||++..
T Consensus 85 ~~l~~~l~~~--------~~~~l~~~~~~~~~~~l~~~l~~lH~---~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~ 153 (257)
T cd08223 85 GDLYHKLKEQ--------KGKLLPENQVVEWFVQIAMALQYLHE---KHILHRDLKTQNVFLTRTNIIKVGDLGIARVLE 153 (257)
T ss_pred CcHHHHHHHh--------cCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCchhEEEecCCcEEEecccceEEec
Confidence 9999999542 23568999999999999999999999 5699999999999999999999999998742
Q ss_pred -----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHH
Q 003594 616 -----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAE 672 (808)
Q Consensus 616 -----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~ 672 (808)
..++.++||||||+++|+|++|+.||...+. ......+.....+..+...+.
T Consensus 154 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 228 (257)
T cd08223 154 NQCDMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM-----NSLVYRIIEGKLPPMPKDYSP 228 (257)
T ss_pred ccCCccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-----HHHHHHHHhcCCCCCccccCH
Confidence 2246789999999999999999999864221 112223333334445567888
Q ss_pred HHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 673 ELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 673 ~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
.+.+++.+||+.+ |..||++.++++
T Consensus 229 ~~~~li~~~l~~~--p~~Rp~~~~~l~ 253 (257)
T cd08223 229 ELGELIATMLSKR--PEKRPSVKSILR 253 (257)
T ss_pred HHHHHHHHHhccC--cccCCCHHHHhc
Confidence 9999999999999 999999998875
No 219
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.97 E-value=2e-31 Score=292.47 Aligned_cols=219 Identities=19% Similarity=0.229 Sum_probs=168.9
Q ss_pred cccccC--CceEEEEEEE--CCeEEEEEEccCCC----CHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCC
Q 003594 468 RLKCAG--DWTNVYRGRL--NHASVAIKTLNNGL----SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPN 537 (808)
Q Consensus 468 ~i~g~G--~~g~Vy~~~~--~~~~vAiK~l~~~~----~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~ 537 (808)
.++|+| +||+||++.. +|..||||.+.... ....+.+|+.+++.++||||++++++|.. ..++||||+++
T Consensus 4 ~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 83 (327)
T cd08227 4 TVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFMAY 83 (327)
T ss_pred hhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEeccCC
Confidence 456777 6899999998 67999999997322 12457789999999999999999999855 78999999999
Q ss_pred CCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--
Q 003594 538 GNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-- 615 (808)
Q Consensus 538 gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-- 615 (808)
|+|.+++... ....+++..++.|+.||+.||.|||+ .+|+||||||+|||++.++.++++|||....
T Consensus 84 ~~l~~~~~~~--------~~~~l~~~~~~~i~~qi~~~L~~LH~---~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~ 152 (327)
T cd08227 84 GSAKDLICTH--------FMDGMSELAIAYILQGVLKALDYIHH---MGYVHRSVKASHILISVDGKVYLSGLRSNLSMI 152 (327)
T ss_pred CcHHHHHHhh--------ccCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCChhhEEEecCCcEEEcccchhhccc
Confidence 9999999543 23458999999999999999999999 5699999999999999999999999974210
Q ss_pred --------------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhh---cHHHHHHHhc
Q 003594 616 --------------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMAL---DQTTLMQVLD 660 (808)
Q Consensus 616 --------------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~---~~~~~~~~ld 660 (808)
..++.++|||||||++|+|++|++||......... .........+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 232 (327)
T cd08227 153 NHGQRLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVPCLLD 232 (327)
T ss_pred cccccccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHHHHHHhcCCcccccc
Confidence 13678999999999999999999999642210000 0000000000
Q ss_pred c-------------------------------------CCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 661 G-------------------------------------NAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 661 ~-------------------------------------~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
. ...+....+++.+.+|+.+||+.| |..|||+.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d--P~~Rpt~~ell~ 306 (327)
T cd08227 233 TTTIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRN--PDARPSASTLLN 306 (327)
T ss_pred ccchhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhC--chhcCCHHHHhc
Confidence 0 000111234678999999999999 999999999986
No 220
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.97 E-value=1.3e-31 Score=287.33 Aligned_cols=233 Identities=19% Similarity=0.267 Sum_probs=184.4
Q ss_pred cCHHHHHHhhccccccccccccCCceEEEEEEE--CCeEEEEEEccCC-CCHHHHHHHHHHHhcc-CCCCccceeeccc-
Q 003594 451 YAAEDIRLATEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNG-LSEEDFQAKVSFLTAV-RHPHLVAVMGCCS- 525 (808)
Q Consensus 451 ~~~~ei~~at~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~- 525 (808)
+.++.+..++++|... +.+|.|+||.||++.. +++.||+|++... .....+.+|+.++..+ +||||++++++|.
T Consensus 8 ~~~~~~~~~~~~~~~~-~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~ 86 (286)
T cd06638 8 IIFDSFPDPSDTWEII-ETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHDIDEEIEAEYNILKALSDHPNVVKFYGMYYK 86 (286)
T ss_pred EEeecCCCcccceeee-eeeccCCCcEEEEEEECCCCceeEEEeeccccchHHHHHHHHHHHHHHhcCCCeeeeeeeeee
Confidence 4556677788888655 5568999999999988 5789999998743 3346788999999999 6999999999873
Q ss_pred ------cceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCccc
Q 003594 526 ------ELKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILL 599 (808)
Q Consensus 526 ------~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILl 599 (808)
+..++||||+++|+|.+++.... .....+++..+..++.|++.||.|||+ .+|+||||||+||++
T Consensus 87 ~~~~~~~~~~lv~e~~~~~~L~~~l~~~~------~~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nili 157 (286)
T cd06638 87 KDVKNGDQLWLVLELCNGGSVTDLVKGFL------KRGERMEEPIIAYILHEALMGLQHLHV---NKTIHRDVKGNNILL 157 (286)
T ss_pred cccCCCCeEEEEEeecCCCCHHHHHHHhh------ccCccccHHHHHHHHHHHHHHHHHHHh---CCccccCCCHHhEEE
Confidence 25799999999999999885431 234568999999999999999999999 569999999999999
Q ss_pred CCCccEEEEeCCCccc------------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhh
Q 003594 600 DRNLVAKISGLGLNIC------------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMA 649 (808)
Q Consensus 600 d~~~~~kl~DfGla~~------------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~ 649 (808)
+.++.+||+|||++.. ..++.++|||||||++|+|++|++||......
T Consensus 158 ~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~-- 235 (286)
T cd06638 158 TTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPM-- 235 (286)
T ss_pred CCCCCEEEccCCceeecccCCCccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchh--
Confidence 9999999999998742 11467899999999999999999998643211
Q ss_pred hcHHHHHHHhccC--CCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 650 LDQTTLMQVLDGN--AGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 650 ~~~~~~~~~ld~~--~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
..+....... ....|..++..+.+|+.+||+.| |..||++.++++.
T Consensus 236 ---~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~--p~~Rps~~ell~~ 283 (286)
T cd06638 236 ---RALFKIPRNPPPTLHQPELWSNEFNDFIRKCLTKD--YEKRPTVSDLLQH 283 (286)
T ss_pred ---HHHhhccccCCCcccCCCCcCHHHHHHHHHHccCC--cccCCCHHHHhhc
Confidence 1111111111 11123345678999999999999 9999999999864
No 221
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.97 E-value=2.4e-31 Score=285.56 Aligned_cols=224 Identities=20% Similarity=0.255 Sum_probs=179.2
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCC---CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCH
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNG---LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNL 540 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~---~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL 540 (808)
+.+|+|+||.||++.. +|..||+|++... .....+.+|++++..++||||+++++++.+ ..++||||+++|+|
T Consensus 11 ~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 90 (284)
T cd06620 11 SDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEFMDCGSL 90 (284)
T ss_pred HHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEecCCCCCH
Confidence 5668999999999998 4889999988732 224678999999999999999999999865 78999999999999
Q ss_pred HHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-----
Q 003594 541 RDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC----- 615 (808)
Q Consensus 541 ~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~----- 615 (808)
.+++. ....+++.....++.+++.||.|||+. .+|+||||||+||+++.++.++|+|||++..
T Consensus 91 ~~~~~----------~~~~~~~~~~~~~~~~i~~~l~~LH~~--~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~ 158 (284)
T cd06620 91 DRIYK----------KGGPIPVEILGKIAVAVVEGLTYLYNV--HRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI 158 (284)
T ss_pred HHHHH----------hccCCCHHHHHHHHHHHHHHHHHHHHh--cCeeccCCCHHHEEECCCCcEEEccCCcccchhhhc
Confidence 99983 345689999999999999999999973 3599999999999999999999999998642
Q ss_pred ------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHh---hhc---HHHHHHHhccCCCCCCh-hh
Q 003594 616 ------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAM---ALD---QTTLMQVLDGNAGIWPL-DL 670 (808)
Q Consensus 616 ------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~---~~~---~~~~~~~ld~~~~~~p~-~~ 670 (808)
..++.++|||||||++|+|+||+.||....... ... ...+..+........+. .+
T Consensus 159 ~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (284)
T cd06620 159 ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEPPPRLPSSDF 238 (284)
T ss_pred cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhccCCCCCchhc
Confidence 245678999999999999999999997432100 000 11222333322333333 36
Q ss_pred HHHHHHHHHHhhccCCCcCccccHHhhHHHHHHHH
Q 003594 671 AEELAGIALKCLSADQDANRDLRIAGVMKELDEVR 705 (808)
Q Consensus 671 ~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~ 705 (808)
+..+.+|+.+||..| |..||++.++++...-+.
T Consensus 239 ~~~~~~li~~~l~~d--p~~Rpt~~e~~~~~~~~~ 271 (284)
T cd06620 239 PEDLRDFVDACLLKD--PTERPTPQQLCAMPPFIQ 271 (284)
T ss_pred CHHHHHHHHHHhcCC--cccCcCHHHHhcCccccc
Confidence 788999999999999 999999999998754443
No 222
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.97 E-value=1.5e-31 Score=300.29 Aligned_cols=226 Identities=21% Similarity=0.325 Sum_probs=193.9
Q ss_pred ccccccCCceEEEEEEE--CC----eEEEEEEccCCCC---HHHHHHHHHHHhccCCCCccceeecccc-ceEEEEeecC
Q 003594 467 FRLKCAGDWTNVYRGRL--NH----ASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE-LKCIVFEYMP 536 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~----~~vAiK~l~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~-~~~lV~Ey~~ 536 (808)
.+++|.|+||+||+|.| .| .+||||++..... ..+|..|+-+|.+++|||+++|+|+|.. ...||++|||
T Consensus 701 ~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~~qlvtq~mP 780 (1177)
T KOG1025|consen 701 DKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLSTLQLVTQLMP 780 (1177)
T ss_pred hceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccchHHHHHHhcc
Confidence 36789999999999999 33 5799999984433 4789999999999999999999999976 6789999999
Q ss_pred CCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-
Q 003594 537 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC- 615 (808)
Q Consensus 537 ~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~- 615 (808)
+|+|.|+++.+ ...+.-+..+.|..|||+||.|||. +.++||||-..|||+..-..+||.|||+++.
T Consensus 781 ~G~LlDyvr~h---------r~~igsq~lLnw~~QIAkgM~YLe~---qrlVHrdLaaRNVLVksP~hvkitdfgla~ll 848 (1177)
T KOG1025|consen 781 LGCLLDYVREH---------RDNIGSQDLLNWCYQIAKGMKYLEE---QRLVHRDLAARNVLVKSPNHVKITDFGLAKLL 848 (1177)
T ss_pred cchHHHHHHHh---------hccccHHHHHHHHHHHHHHHHHHHh---cchhhhhhhhhheeecCCCeEEEEecchhhcc
Confidence 99999999754 4567888899999999999999999 6799999999999999999999999999975
Q ss_pred --------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHh-ccCCCCCC
Q 003594 616 --------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVL-DGNAGIWP 667 (808)
Q Consensus 616 --------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~l-d~~~~~~p 667 (808)
..|+.++|||||||++||++| |..|+... ....+.+++ .+.+...|
T Consensus 849 ~~d~~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi------~~~eI~dlle~geRLsqP 922 (1177)
T KOG1025|consen 849 APDEKEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGI------PAEEIPDLLEKGERLSQP 922 (1177)
T ss_pred CcccccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCC------CHHHhhHHHhccccCCCC
Confidence 358999999999999999999 88887653 222333333 35667889
Q ss_pred hhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHHHHhccccC
Q 003594 668 LDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVRKKADGLA 712 (808)
Q Consensus 668 ~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~~~~~~~~ 712 (808)
+.++-++..++.+||..| +..||+++++...+.++.+....+.
T Consensus 923 piCtiDVy~~mvkCwmid--~~~rp~fkel~~~fs~~ardpqryl 965 (1177)
T KOG1025|consen 923 PICTIDVYMVMVKCWMID--ADSRPTFKELAEEFSRMARDPQRYL 965 (1177)
T ss_pred CCccHHHHHHHHHHhccC--cccCccHHHHHHHHHHHhcCcceEe
Confidence 999999999999999999 9999999999999998876554433
No 223
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.97 E-value=3.3e-31 Score=279.32 Aligned_cols=216 Identities=20% Similarity=0.293 Sum_probs=178.6
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccC----CCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNN----GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNG 538 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~----~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~g 538 (808)
.+++|.|+||.||.+.. ++..|++|.+.. ......+.+|+.++++++||||+++++++.+ ..++||||+++|
T Consensus 5 ~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~~~~~ 84 (256)
T cd08221 5 IRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEYANGG 84 (256)
T ss_pred eeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEecCCC
Confidence 46778999999988887 678999998772 2223578899999999999999999999866 778999999999
Q ss_pred CHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc---
Q 003594 539 NLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC--- 615 (808)
Q Consensus 539 sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~--- 615 (808)
+|.+++... ....+++..+..++.|++.||.|||+ .+++||||+|+||+++.++.+||+|||++..
T Consensus 85 ~L~~~~~~~--------~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~ 153 (256)
T cd08221 85 TLYDKIVRQ--------KGQLFEEEMVLWYLFQIVSAVSYIHK---AGILHRDIKTLNIFLTKAGLIKLGDFGISKILGS 153 (256)
T ss_pred cHHHHHHhc--------cccCCCHHHHHHHHHHHHHHHHHHHh---CCccccCCChHhEEEeCCCCEEECcCcceEEccc
Confidence 999999532 24568999999999999999999999 5699999999999999999999999998743
Q ss_pred ----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHH
Q 003594 616 ----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEE 673 (808)
Q Consensus 616 ----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~ 673 (808)
..++.++||||||+++|+|++|..||.... .......+..+.....+..++..
T Consensus 154 ~~~~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 228 (256)
T cd08221 154 EYSMAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATN-----PLNLVVKIVQGNYTPVVSVYSSE 228 (256)
T ss_pred ccccccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHcCCCCCCccccCHH
Confidence 124678999999999999999999986421 12233334444444445567889
Q ss_pred HHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 674 LAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 674 l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
+.+++.+||..+ |..||++.++++.
T Consensus 229 ~~~~i~~~l~~~--p~~R~s~~~ll~~ 253 (256)
T cd08221 229 LISLVHSLLQQD--PEKRPTADEVLDQ 253 (256)
T ss_pred HHHHHHHHcccC--cccCCCHHHHhhC
Confidence 999999999999 9999999998864
No 224
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.97 E-value=2.8e-31 Score=280.09 Aligned_cols=219 Identities=19% Similarity=0.285 Sum_probs=178.6
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCC-C---CHHHHHHHHHHHhccCCCCccceeecccc----ceEEEEeecCC
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNG-L---SEEDFQAKVSFLTAVRHPHLVAVMGCCSE----LKCIVFEYMPN 537 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-~---~~~~~~~Ei~il~~l~HpnIv~l~g~~~~----~~~lV~Ey~~~ 537 (808)
..+|.|+||.||++.. ++..||+|.+... . ..+.+..|+.++++++||||+++++++.. ..+++|||+++
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~e~~~~ 85 (265)
T cd08217 6 ETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVMEYCEG 85 (265)
T ss_pred eeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEehhccC
Confidence 4567899999999987 6789999998732 2 23568889999999999999999997743 56899999999
Q ss_pred CCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcC--CCCeEecCCCCCCcccCCCccEEEEeCCCccc
Q 003594 538 GNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTE--PRPIVHGSLTPSSILLDRNLVAKISGLGLNIC 615 (808)
Q Consensus 538 gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~--~~~iiHrDLKp~NILld~~~~~kl~DfGla~~ 615 (808)
++|.+++.... .....+++..++.++.||+.||.|||..+ ..+|+|+||||+||+++.++.+||+|||++..
T Consensus 86 ~~L~~~l~~~~------~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~ 159 (265)
T cd08217 86 GDLAQLIQKCK------KERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKI 159 (265)
T ss_pred CCHHHHHHHHh------hcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccccccc
Confidence 99999996432 23567999999999999999999999321 16799999999999999999999999998753
Q ss_pred -------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhh
Q 003594 616 -------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDL 670 (808)
Q Consensus 616 -------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~ 670 (808)
..++.++||||||+++|+|++|+.||..... ......+..+.....+...
T Consensus 160 ~~~~~~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~ 234 (265)
T cd08217 160 LGHDSSFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARNQ-----LQLASKIKEGKFRRIPYRY 234 (265)
T ss_pred ccCCcccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcCH-----HHHHHHHhcCCCCCCcccc
Confidence 1246779999999999999999999875321 1222333334445567778
Q ss_pred HHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 671 AEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 671 ~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
+..+.+++.+||+.+ |..||++.+|++
T Consensus 235 ~~~~~~l~~~~l~~~--p~~Rp~~~~il~ 261 (265)
T cd08217 235 SSELNEVIKSMLNVD--PDKRPSTEELLQ 261 (265)
T ss_pred CHHHHHHHHHHccCC--cccCCCHHHHhh
Confidence 899999999999999 999999999885
No 225
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.97 E-value=3.2e-31 Score=288.41 Aligned_cols=225 Identities=20% Similarity=0.244 Sum_probs=174.3
Q ss_pred cccccccccccCCceEEEEEEE--CCeEEEEEEccCCCC---HHHHHHHHHHHhccCCCCccceeecccc--ceEEEEee
Q 003594 462 DFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEY 534 (808)
Q Consensus 462 ~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey 534 (808)
+|... +.+|.|+||.||++.+ ++..||+|.+..... ...+.+|++++.+++||||++++++|.+ ..++||||
T Consensus 2 ~~~~~-~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 2 DFEKL-GELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CceEE-eeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 34433 4567999999999998 578899999874322 3568899999999999999999999865 78999999
Q ss_pred cCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCcc
Q 003594 535 MPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNI 614 (808)
Q Consensus 535 ~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~ 614 (808)
+++|+|.+++. ....+++..+..++.||+.||.|||+. .+|+||||||+|||++.++.+||+|||++.
T Consensus 81 ~~~~~L~~~l~----------~~~~~~~~~~~~~~~~i~~~l~~lH~~--~~i~H~dl~p~nil~~~~~~~~l~dfg~~~ 148 (308)
T cd06615 81 MDGGSLDQVLK----------KAGRIPENILGKISIAVLRGLTYLREK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSG 148 (308)
T ss_pred cCCCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHhh--CCEEECCCChHHEEEecCCcEEEccCCCcc
Confidence 99999999994 335689999999999999999999973 259999999999999999999999999874
Q ss_pred c-----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhh---hc-----------------
Q 003594 615 C-----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMA---LD----------------- 651 (808)
Q Consensus 615 ~-----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~---~~----------------- 651 (808)
. ..++.++|||||||++|+|++|+.||........ ..
T Consensus 149 ~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (308)
T cd06615 149 QLIDSMANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAKELEAMFGRPVSEGEAKESHRPVSG 228 (308)
T ss_pred cccccccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchhhHHHhhcCccccccccCCcccccC
Confidence 2 2357789999999999999999999853211000 00
Q ss_pred -----------HHHHHHHhccCCCCCCh-hhHHHHHHHHHHhhccCCCcCccccHHhhHHHH
Q 003594 652 -----------QTTLMQVLDGNAGIWPL-DLAEELAGIALKCLSADQDANRDLRIAGVMKEL 701 (808)
Q Consensus 652 -----------~~~~~~~ld~~~~~~p~-~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L 701 (808)
......+.....+..|. .++.++.+|+.+||..+ |..||++.+|+...
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~--P~~Rpt~~~ll~~~ 288 (308)
T cd06615 229 HPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKN--PKERADLKELTKHP 288 (308)
T ss_pred CCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCC--hhhCcCHHHHhcCh
Confidence 00001111111111111 35678999999999999 99999999988653
No 226
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=99.97 E-value=3.6e-31 Score=278.60 Aligned_cols=213 Identities=20% Similarity=0.275 Sum_probs=175.3
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCCCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCHHHH
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNLRDK 543 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL~~~ 543 (808)
+.+|.|+||.||+|.+ ++..|++|.+......+.+.+|+.++++++||||+++++++.+ ..|++|||+++++|.++
T Consensus 9 ~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~ 88 (256)
T cd06612 9 EKLGEGSYGSVYKAIHKETGQVVAIKVVPVEEDLQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYCGAGSVSDI 88 (256)
T ss_pred hhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecCCCCcHHHH
Confidence 4467899999999998 3689999999854447789999999999999999999999865 78999999999999999
Q ss_pred HhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--------
Q 003594 544 LFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-------- 615 (808)
Q Consensus 544 l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-------- 615 (808)
+.. ....+++..+..++.|++.||.|||+ .+|+||||+|+||+++.++.+||+|||++..
T Consensus 89 l~~---------~~~~l~~~~~~~~~~~l~~~l~~lh~---~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~ 156 (256)
T cd06612 89 MKI---------TNKTLTEEEIAAILYQTLKGLEYLHS---NKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKR 156 (256)
T ss_pred HHh---------CccCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcceEEECCCCcEEEcccccchhcccCcccc
Confidence 952 24578999999999999999999999 5699999999999999999999999998743
Q ss_pred -----------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhcc--CCCCCChhhHHHHHH
Q 003594 616 -----------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDG--NAGIWPLDLAEELAG 676 (808)
Q Consensus 616 -----------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~--~~~~~p~~~~~~l~~ 676 (808)
..++.++||||||+++|+|++|++||...... .....+... .....+..++..+.+
T Consensus 157 ~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (256)
T cd06612 157 NTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPM-----RAIFMIPNKPPPTLSDPEKWSPEFND 231 (256)
T ss_pred ccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchh-----hhhhhhccCCCCCCCchhhcCHHHHH
Confidence 23467899999999999999999998753221 111111111 111223456678999
Q ss_pred HHHHhhccCCCcCccccHHhhHH
Q 003594 677 IALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 677 Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
++.+||+.| |..||++.+|+.
T Consensus 232 ~i~~~l~~~--P~~Rps~~~il~ 252 (256)
T cd06612 232 FVKKCLVKD--PEERPSAIQLLQ 252 (256)
T ss_pred HHHHHHhcC--hhhCcCHHHHhc
Confidence 999999999 999999999875
No 227
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=3.8e-31 Score=286.26 Aligned_cols=211 Identities=17% Similarity=0.260 Sum_probs=173.4
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccC--CCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCHH
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNN--GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNLR 541 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~--~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL~ 541 (808)
+.+|.|+||.||+|.. +|+.||||.+.. ....+.+.+|+.+++.++||||+++++++.+ ..++||||+++++|.
T Consensus 25 ~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 104 (296)
T cd06655 25 EKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYLAGGSLT 104 (296)
T ss_pred EEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEecCCCcHH
Confidence 4467899999999987 689999999872 2335678899999999999999999999855 789999999999999
Q ss_pred HHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc------
Q 003594 542 DKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC------ 615 (808)
Q Consensus 542 ~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~------ 615 (808)
.++. ...+++..+..++.+++.||.|||+ .+++||||||+||+++.++.+||+|||++..
T Consensus 105 ~~~~-----------~~~l~~~~~~~i~~~l~~al~~LH~---~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 170 (296)
T cd06655 105 DVVT-----------ETCMDEAQIAAVCRECLQALEFLHA---NQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS 170 (296)
T ss_pred HHHH-----------hcCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEccCccchhcccccc
Confidence 9883 2358999999999999999999999 5699999999999999999999999998642
Q ss_pred -------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhcc--CCCCCChhhHHHH
Q 003594 616 -------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDG--NAGIWPLDLAEEL 674 (808)
Q Consensus 616 -------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~--~~~~~p~~~~~~l 674 (808)
..++.++|||||||++|+|++|++||...... .....+... .....+..++..+
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 245 (296)
T cd06655 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL-----RALYLIATNGTPELQNPEKLSPIF 245 (296)
T ss_pred cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHhcCCcccCCcccCCHHH
Confidence 22567899999999999999999999753221 111111111 1222345677899
Q ss_pred HHHHHHhhccCCCcCccccHHhhHH
Q 003594 675 AGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 675 ~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
.+++.+||..| |..||++.+++.
T Consensus 246 ~~li~~~l~~d--p~~Rpt~~~il~ 268 (296)
T cd06655 246 RDFLNRCLEMD--VEKRGSAKELLQ 268 (296)
T ss_pred HHHHHHHhhcC--hhhCCCHHHHhh
Confidence 99999999999 999999998874
No 228
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=99.97 E-value=5.1e-32 Score=271.31 Aligned_cols=212 Identities=24% Similarity=0.370 Sum_probs=176.9
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCC------CCH----HHHHHHHHHHhcc-CCCCccceeecccc--ceEEEE
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNG------LSE----EDFQAKVSFLTAV-RHPHLVAVMGCCSE--LKCIVF 532 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~------~~~----~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~~~lV~ 532 (808)
+++|+|..+.|-++.. +|..+|+|++... ... +.-.+|+.||+++ .||||+++.+++.. ..++|+
T Consensus 23 eilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes~sF~FlVF 102 (411)
T KOG0599|consen 23 EILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYESDAFVFLVF 102 (411)
T ss_pred HHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccCcchhhhhh
Confidence 4567787888888887 6789999998721 112 3456799999998 69999999999976 678999
Q ss_pred eecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCC
Q 003594 533 EYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 612 (808)
Q Consensus 533 Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGl 612 (808)
|.|+.|.|.|+| .....+++....+|+.|+..|+.|||. ++||||||||+|||+|+|.++||+|||+
T Consensus 103 dl~prGELFDyL----------ts~VtlSEK~tR~iMrqlfegVeylHa---~~IVHRDLKpENILlddn~~i~isDFGF 169 (411)
T KOG0599|consen 103 DLMPRGELFDYL----------TSKVTLSEKETRRIMRQLFEGVEYLHA---RNIVHRDLKPENILLDDNMNIKISDFGF 169 (411)
T ss_pred hhcccchHHHHh----------hhheeecHHHHHHHHHHHHHHHHHHHH---hhhhhcccChhheeeccccceEEeccce
Confidence 999999999999 566789999999999999999999999 6699999999999999999999999999
Q ss_pred ccc------------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhcc-
Q 003594 613 NIC------------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDG- 661 (808)
Q Consensus 613 a~~------------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~- 661 (808)
|.. .+|+..+|+||+|||||.|+.|.|||-..... ..+..+..+
T Consensus 170 a~~l~~GekLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQm-----lMLR~ImeGk 244 (411)
T KOG0599|consen 170 ACQLEPGEKLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQM-----LMLRMIMEGK 244 (411)
T ss_pred eeccCCchhHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHHH-----HHHHHHHhcc
Confidence 853 46889999999999999999999999753221 122233333
Q ss_pred ---CCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 662 ---NAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 662 ---~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
..+.| .+++....+||.+||+.| |..|.|+.|++..
T Consensus 245 yqF~speW-adis~~~KdLIsrlLqVd--p~~Ritake~LaH 283 (411)
T KOG0599|consen 245 YQFRSPEW-ADISATVKDLISRLLQVD--PTKRITAKEALAH 283 (411)
T ss_pred cccCCcch-hhccccHHHHHHHHHeeC--chhcccHHHHhcC
Confidence 23344 378899999999999999 9999999999864
No 229
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.97 E-value=6.2e-31 Score=280.43 Aligned_cols=224 Identities=19% Similarity=0.344 Sum_probs=177.2
Q ss_pred cccccCCceEEEEEEEC-------CeEEEEEEccCCCC---HHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeec
Q 003594 468 RLKCAGDWTNVYRGRLN-------HASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYM 535 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~~-------~~~vAiK~l~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~ 535 (808)
..+|.|+||.||+|... ...|++|.+..... .+.+.+|+.++++++||||++++++|.+ ..++||||+
T Consensus 11 ~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 90 (275)
T cd05046 11 TTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHYMILEYT 90 (275)
T ss_pred eeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcceEEEEec
Confidence 45678999999999962 36799999874332 3679999999999999999999999966 789999999
Q ss_pred CCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc
Q 003594 536 PNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC 615 (808)
Q Consensus 536 ~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~ 615 (808)
++|+|.+++........ ......+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.++|+|||++..
T Consensus 91 ~~~~L~~~i~~~~~~~~-~~~~~~l~~~~~~~~~~~l~~~l~~LH~---~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~ 166 (275)
T cd05046 91 DLGDLKQFLRATKSKDE-KLKPPPLSTKQKVALCTQIALGMDHLSN---ARFVHRDLAARNCLVSSQREVKVSLLSLSKD 166 (275)
T ss_pred CCCcHHHHHHhcccccc-cccccCCCHHHHHHHHHHHHHHHHHhhh---cCcccCcCccceEEEeCCCcEEEcccccccc
Confidence 99999999964421000 0112368999999999999999999999 5699999999999999999999999998742
Q ss_pred --------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhcc-CCCCCC
Q 003594 616 --------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDG-NAGIWP 667 (808)
Q Consensus 616 --------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~-~~~~~p 667 (808)
..++.++||||||+++|+|++ |..||..... ...+...... .....+
T Consensus 167 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~-----~~~~~~~~~~~~~~~~~ 241 (275)
T cd05046 167 VYNSEYYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD-----EEVLNRLQAGKLELPVP 241 (275)
T ss_pred cCcccccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccch-----HHHHHHHHcCCcCCCCC
Confidence 234677999999999999999 7888864321 1122222211 112234
Q ss_pred hhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHH
Q 003594 668 LDLAEELAGIALKCLSADQDANRDLRIAGVMKELD 702 (808)
Q Consensus 668 ~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~ 702 (808)
..++..+.+++.+||..+ |..||++.+++..|.
T Consensus 242 ~~~~~~l~~~i~~~l~~~--p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 242 EGCPSRLYKLMTRCWAVN--PKDRPSFSELVSALG 274 (275)
T ss_pred CCCCHHHHHHHHHHcCCC--cccCCCHHHHHHHhc
Confidence 467789999999999999 999999999998874
No 230
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.97 E-value=5.6e-31 Score=286.91 Aligned_cols=225 Identities=16% Similarity=0.241 Sum_probs=167.1
Q ss_pred cccccCCceEEEEEEE----CCeEEEEEEccCCCCHHHHHHHHHHHhccCCCCccceeecccc----ceEEEEeecCCCC
Q 003594 468 RLKCAGDWTNVYRGRL----NHASVAIKTLNNGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE----LKCIVFEYMPNGN 539 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~----~~~~vAiK~l~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~----~~~lV~Ey~~~gs 539 (808)
..+|.|+||.||+|.. ++..||+|.+........+.+|+.+|++++||||+++++++.. ..++||||+. ++
T Consensus 7 ~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~-~~ 85 (317)
T cd07867 7 CKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE-HD 85 (317)
T ss_pred eEeccCCCeeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC-Cc
Confidence 4568999999999997 2478999999855555678899999999999999999998832 6789999996 58
Q ss_pred HHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCccc----CCCccEEEEeCCCccc
Q 003594 540 LRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILL----DRNLVAKISGLGLNIC 615 (808)
Q Consensus 540 L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILl----d~~~~~kl~DfGla~~ 615 (808)
|.+++........ ......+++..+..|+.||+.||.|||+ .+|+||||||+|||+ +.++.+||+|||+++.
T Consensus 86 l~~~~~~~~~~~~-~~~~~~l~~~~~~~i~~qi~~aL~~lH~---~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~ 161 (317)
T cd07867 86 LWHIIKFHRASKA-NKKPMQLPRSMVKSLLYQILDGIHYLHA---NWVLHRDLKPANILVMGEGPERGRVKIADMGFARL 161 (317)
T ss_pred HHHHHHhhhcccc-CCCCccCCHHHHHHHHHHHHHHHHHHHh---CCEEcCCCCHHHEEEccCCCCCCcEEEeeccceec
Confidence 8888753321100 0123468999999999999999999999 669999999999999 5678999999998742
Q ss_pred -----------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhh----hcHHHHHHHhcc-
Q 003594 616 -----------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMA----LDQTTLMQVLDG- 661 (808)
Q Consensus 616 -----------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~----~~~~~~~~~ld~- 661 (808)
..++.++|||||||++|||+||++||........ .....+..+...
T Consensus 162 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (317)
T cd07867 162 FNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVM 241 (317)
T ss_pred cCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhc
Confidence 1257789999999999999999999863211000 000000000000
Q ss_pred ---C---------------------------------CCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 662 ---N---------------------------------AGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 662 ---~---------------------------------~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
. ...........+.+|+.+||..| |.+|||+.|+++
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~d--P~~R~t~~e~l~ 313 (317)
T cd07867 242 GFPADKDWEDIRKMPEYPTLQKDFRRTTYANSSLIKYMEKHKVKPDSKVFLLLQKLLTMD--PTKRITSEQALQ 313 (317)
T ss_pred CCCChhhhhhhhhcccchhhhhhhcccccCCchhhhhhhcccCCCChHHHHHHHHHhccC--cccccCHHHHhc
Confidence 0 00001122456888999999999 999999999874
No 231
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.97 E-value=5.6e-31 Score=277.54 Aligned_cols=215 Identities=18% Similarity=0.300 Sum_probs=179.9
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccC----CCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNN----GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNG 538 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~----~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~g 538 (808)
.+.+|.|+||.||++.. +|+.||+|.+.. ......+.+|+.++++++||||+++++++.+ ..++||||++++
T Consensus 5 ~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (256)
T cd08218 5 VKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDYCEGG 84 (256)
T ss_pred EEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEecCCCC
Confidence 35678999999999998 678999999862 1233578999999999999999999999865 789999999999
Q ss_pred CHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc---
Q 003594 539 NLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC--- 615 (808)
Q Consensus 539 sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~--- 615 (808)
+|.+++... ....+++..++.++.|++.||.|||+ .+++|+||+|+|||++.++.++|+|||++..
T Consensus 85 ~l~~~~~~~--------~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~ 153 (256)
T cd08218 85 DLYKKINAQ--------RGVLFPEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNS 153 (256)
T ss_pred cHHHHHHhc--------cCCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEEeeccceeecCc
Confidence 999998532 23468999999999999999999999 5699999999999999999999999998742
Q ss_pred ----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHH
Q 003594 616 ----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEE 673 (808)
Q Consensus 616 ----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~ 673 (808)
..++.++|||||||++|+|++|+.||.... .......++.+.....+...+..
T Consensus 154 ~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 228 (256)
T cd08218 154 TVELARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGN-----MKNLVLKIIRGSYPPVSSHYSYD 228 (256)
T ss_pred chhhhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCC-----HHHHHHHHhcCCCCCCcccCCHH
Confidence 234678999999999999999999986421 12333444555555566678889
Q ss_pred HHHHHHHhhccCCCcCccccHHhhHH
Q 003594 674 LAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 674 l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
+.+++.+||+.+ |..||++.+|+.
T Consensus 229 ~~~li~~~l~~~--p~~Rp~~~~vl~ 252 (256)
T cd08218 229 LRNLVSQLFKRN--PRDRPSVNSILE 252 (256)
T ss_pred HHHHHHHHhhCC--hhhCcCHHHHhh
Confidence 999999999999 999999999986
No 232
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.97 E-value=5.4e-31 Score=277.10 Aligned_cols=216 Identities=28% Similarity=0.485 Sum_probs=178.7
Q ss_pred cccccCCceEEEEEEECC------eEEEEEEccCCC---CHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecC
Q 003594 468 RLKCAGDWTNVYRGRLNH------ASVAIKTLNNGL---SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMP 536 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~~~------~~vAiK~l~~~~---~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~ 536 (808)
..+|.|+||.||++.+.+ ..||+|++.... ....+..|+.++..++||||+++++++.+ ..+++|||++
T Consensus 5 ~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~e~~~ 84 (258)
T smart00219 5 KKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVMEYME 84 (258)
T ss_pred ceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEEeccC
Confidence 456889999999999843 889999998443 35689999999999999999999999865 7899999999
Q ss_pred CCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-
Q 003594 537 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC- 615 (808)
Q Consensus 537 ~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~- 615 (808)
+++|.+++... ....+++..+..++.|++.||.|||+ .+++||||||+||+++.++.++|+|||++..
T Consensus 85 ~~~l~~~~~~~--------~~~~~~~~~~~~~~~ql~~~l~~lh~---~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~ 153 (258)
T smart00219 85 GGDLLDYLRKN--------RPKELSLSDLLSFALQIARGMEYLES---KNFIHRDLAARNCLVGENLVVKISDFGLSRDL 153 (258)
T ss_pred CCCHHHHHHhh--------hhccCCHHHHHHHHHHHHHHHHHHhc---CCeeecccccceEEEccCCeEEEcccCCceec
Confidence 99999999532 11228999999999999999999999 5699999999999999999999999999842
Q ss_pred -------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCCCCCChh
Q 003594 616 -------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLD 669 (808)
Q Consensus 616 -------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~ 669 (808)
..++.++||||||+++|+|++ |.+||.... .......+........+..
T Consensus 154 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~-----~~~~~~~~~~~~~~~~~~~ 228 (258)
T smart00219 154 YDDDYYKKKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMS-----NEEVLEYLKKGYRLPKPEN 228 (258)
T ss_pred ccccccccccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC-----HHHHHHHHhcCCCCCCCCc
Confidence 235678999999999999998 888886421 1222233333344445566
Q ss_pred hHHHHHHHHHHhhccCCCcCccccHHhhHHHH
Q 003594 670 LAEELAGIALKCLSADQDANRDLRIAGVMKEL 701 (808)
Q Consensus 670 ~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L 701 (808)
.+..+.+++.+||..+ |..|||+.++++.|
T Consensus 229 ~~~~~~~~i~~~l~~~--p~~Rpt~~~ll~~l 258 (258)
T smart00219 229 CPPEIYKLMLQCWAED--PEDRPTFSELVEIL 258 (258)
T ss_pred CCHHHHHHHHHHCcCC--hhhCcCHHHHHhhC
Confidence 8889999999999999 99999999998754
No 233
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.97 E-value=4.5e-31 Score=282.80 Aligned_cols=215 Identities=19% Similarity=0.302 Sum_probs=171.3
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccCCCC---HHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGN 539 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gs 539 (808)
.+++|.|+||.||+|.+ ++..||+|++..... ...+.+|+.++.+++||||++++++|.. ..++||||+++|+
T Consensus 6 ~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 85 (279)
T cd06619 6 QEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEFMDGGS 85 (279)
T ss_pred eeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEecCCCCC
Confidence 35678999999999997 678999999873322 3568899999999999999999999855 7889999999999
Q ss_pred HHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc----
Q 003594 540 LRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC---- 615 (808)
Q Consensus 540 L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~---- 615 (808)
|..+. .+++..+..++.|++.||.|||+ .+|+|+||||+|||++.++.+||+|||++..
T Consensus 86 l~~~~--------------~~~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~ 148 (279)
T cd06619 86 LDVYR--------------KIPEHVLGRIAVAVVKGLTYLWS---LKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS 148 (279)
T ss_pred hHHhh--------------cCCHHHHHHHHHHHHHHHHHHHH---CCEeeCCCCHHHEEECCCCCEEEeeCCcceecccc
Confidence 86543 36788899999999999999999 5699999999999999999999999998742
Q ss_pred -------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHh--hhcHHHHHHHhccCCCCCC-hhhHHH
Q 003594 616 -------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAM--ALDQTTLMQVLDGNAGIWP-LDLAEE 673 (808)
Q Consensus 616 -------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~--~~~~~~~~~~ld~~~~~~p-~~~~~~ 673 (808)
..++.++||||||+++|+|++|+.||....... .........+.+......+ ...+.+
T Consensus 149 ~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (279)
T cd06619 149 IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDEDPPVLPVGQFSEK 228 (279)
T ss_pred cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccCCCCCCCCcCCHH
Confidence 236788999999999999999999986432110 0111112222222222222 246678
Q ss_pred HHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 674 LAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 674 l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
+.+++.+||+.+ |..||++.+++..
T Consensus 229 ~~~li~~~l~~~--P~~Rp~~~eil~~ 253 (279)
T cd06619 229 FVHFITQCMRKQ--PKERPAPENLMDH 253 (279)
T ss_pred HHHHHHHHhhCC--hhhCCCHHHHhcC
Confidence 999999999999 9999999998764
No 234
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=99.97 E-value=4e-31 Score=277.60 Aligned_cols=218 Identities=21% Similarity=0.324 Sum_probs=171.3
Q ss_pred ccccCCceEEEEEEE--CCeEEEEEEccCCC----CHHHHHHHHHHHhccCCCC-ccceeecccc--------ceEEEEe
Q 003594 469 LKCAGDWTNVYRGRL--NHASVAIKTLNNGL----SEEDFQAKVSFLTAVRHPH-LVAVMGCCSE--------LKCIVFE 533 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~----~~~~~~~Ei~il~~l~Hpn-Iv~l~g~~~~--------~~~lV~E 533 (808)
.+|+|+||+||+|+. +|..||+|+++-.. .+....+|+.+|..++|+| ||.|++++.. ..+||||
T Consensus 18 klGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~~l~lvfe 97 (323)
T KOG0594|consen 18 KLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIGKLYLVFE 97 (323)
T ss_pred HhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccceEEEEEE
Confidence 468999999999998 78999999998222 3456789999999999999 9999999844 5689999
Q ss_pred ecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCc
Q 003594 534 YMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 613 (808)
Q Consensus 534 y~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla 613 (808)
|+. -+|.+++..... ....++...+..++.||+.||+|||+ .+|+||||||.||||+++|.+||+|||+|
T Consensus 98 ~~d-~DL~~ymd~~~~------~~~g~~~~~ik~~m~Qll~gl~~~H~---~~IlHRDLKPQNlLi~~~G~lKlaDFGlA 167 (323)
T KOG0594|consen 98 FLD-RDLKKYMDSLPK------KPQGLPPRLIKSFMRQLLRGLAFLHS---HGILHRDLKPQNLLISSSGVLKLADFGLA 167 (323)
T ss_pred eec-ccHHHHHHhccc------cccCCCHHHHHHHHHHHHHHHHHHHh---CCeecccCCcceEEECCCCcEeeeccchH
Confidence 996 799999965421 11457778999999999999999999 55999999999999999999999999998
Q ss_pred cc--------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhc-cCCCCC
Q 003594 614 IC--------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLD-GNAGIW 666 (808)
Q Consensus 614 ~~--------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld-~~~~~~ 666 (808)
+. ..|++..||||+|||+.||+++++-|...... ..-.....++. +....|
T Consensus 168 ra~~ip~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~--~ql~~If~~lGtP~e~~W 245 (323)
T KOG0594|consen 168 RAFSIPMRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEI--DQLFRIFRLLGTPNEKDW 245 (323)
T ss_pred HHhcCCcccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHH--HHHHHHHHHcCCCCccCC
Confidence 64 35889999999999999999999888653221 11111111211 111122
Q ss_pred Ch------------------h-------hHHHHHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 667 PL------------------D-------LAEELAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 667 p~------------------~-------~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
|. . ......+++.+||+++ |..|.|+..++..
T Consensus 246 p~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~--p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 246 PGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYD--PAKRISAKGALTH 302 (323)
T ss_pred CCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccC--cccCcCHHHHhcC
Confidence 21 1 1237889999999999 8999998888764
No 235
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.97 E-value=4.2e-31 Score=293.81 Aligned_cols=221 Identities=18% Similarity=0.220 Sum_probs=168.9
Q ss_pred ccccccccccccCCceEEEEEEE--CCeEEEEEEccCC----CCHHHHHHHHHHHhccCCCCccceeecccc--------
Q 003594 461 EDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNG----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE-------- 526 (808)
Q Consensus 461 ~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-------- 526 (808)
++|.. .+.+|.|+||.||++.. +|..||||++... .....+.+|+.+++.++||||+++++++..
T Consensus 21 ~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 99 (359)
T cd07876 21 KRYQQ-LKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEFQ 99 (359)
T ss_pred hceEE-EEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCccccc
Confidence 44543 46778999999999988 5789999998632 224578899999999999999999998742
Q ss_pred ceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEE
Q 003594 527 LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAK 606 (808)
Q Consensus 527 ~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~k 606 (808)
..|+||||++ ++|.+.+. ..+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+|
T Consensus 100 ~~~lv~e~~~-~~l~~~~~------------~~~~~~~~~~~~~qi~~~L~~LH~---~~ivHrDlkp~NIl~~~~~~~k 163 (359)
T cd07876 100 DVYLVMELMD-ANLCQVIH------------MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLK 163 (359)
T ss_pred eeEEEEeCCC-cCHHHHHh------------ccCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEE
Confidence 3689999997 56777662 237888999999999999999999 5699999999999999999999
Q ss_pred EEeCCCccc------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhh---------c--
Q 003594 607 ISGLGLNIC------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMAL---------D-- 651 (808)
Q Consensus 607 l~DfGla~~------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~---------~-- 651 (808)
|+|||+++. ..++.++|||||||++|+|+||+.||...+..... .
T Consensus 164 l~Dfg~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~ 243 (359)
T cd07876 164 ILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSA 243 (359)
T ss_pred EecCCCccccccCccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcH
Confidence 999998742 24678899999999999999999999642210000 0
Q ss_pred ------HHHHHHHhcc--CCC-----------------CCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 652 ------QTTLMQVLDG--NAG-----------------IWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 652 ------~~~~~~~ld~--~~~-----------------~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
.......... ... ..+...+..+.+|+.+||..| |..|||+.|++..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~d--P~~R~t~~e~l~h 315 (359)
T cd07876 244 EFMNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVID--PDKRISVDEALRH 315 (359)
T ss_pred HHHHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccC--cccCCCHHHHhcC
Confidence 0000111110 000 011123567899999999999 9999999999864
No 236
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.97 E-value=5.4e-31 Score=281.69 Aligned_cols=215 Identities=20% Similarity=0.304 Sum_probs=176.9
Q ss_pred ccccccccCCceEEEEEEE--CCeEEEEEEccCCC---CHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCC
Q 003594 465 ERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNGL---SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPN 537 (808)
Q Consensus 465 ~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~---~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~ 537 (808)
...+.+|.|+||.||+|.+ ++..||||.+.... ....+.+|+.++.+++||||+++++++.+ ..++||||+++
T Consensus 7 ~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 86 (277)
T cd06641 7 TKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGG 86 (277)
T ss_pred hhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCCC
Confidence 3445678899999999987 57899999986322 23578899999999999999999999865 78999999999
Q ss_pred CCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--
Q 003594 538 GNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-- 615 (808)
Q Consensus 538 gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-- 615 (808)
|+|.+++. ...+++..+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++..
T Consensus 87 ~~l~~~i~-----------~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~ 152 (277)
T cd06641 87 GSALDLLE-----------PGPLDETQIATILREILKGLDYLHS---EKKIHRDIKAANVLLSEHGEVKLADFGVAGQLT 152 (277)
T ss_pred CcHHHHHh-----------cCCCCHHHHHHHHHHHHHHHHHHcc---CCeecCCCCHHhEEECCCCCEEEeecccceecc
Confidence 99999983 2358999999999999999999999 6699999999999999999999999998732
Q ss_pred -----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHH
Q 003594 616 -----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAE 672 (808)
Q Consensus 616 -----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~ 672 (808)
...+.++|||||||++|+|++|.+||..... ......+........+..++.
T Consensus 153 ~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 227 (277)
T cd06641 153 DTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHP-----MKVLFLIPKNNPPTLEGNYSK 227 (277)
T ss_pred cchhhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccch-----HHHHHHHhcCCCCCCCcccCH
Confidence 2346789999999999999999999864321 111222222333445556788
Q ss_pred HHHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 673 ELAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 673 ~l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
.+.+++.+||..+ |..||++.+++..
T Consensus 228 ~~~~~i~~~l~~~--p~~Rp~~~~~l~~ 253 (277)
T cd06641 228 PLKEFVEACLNKE--PSFRPTAKELLKH 253 (277)
T ss_pred HHHHHHHHHccCC--hhhCcCHHHHHhC
Confidence 9999999999999 9999999999884
No 237
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.97 E-value=2.7e-31 Score=284.56 Aligned_cols=219 Identities=19% Similarity=0.261 Sum_probs=170.3
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCC----CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCC
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNG----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGN 539 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gs 539 (808)
+.+|.|+||.||+|.. ++..||||.+... .....+.+|+.++..++||||+++++++.+ ..++||||++ ++
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~ 84 (285)
T cd07861 6 EKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEFLS-MD 84 (285)
T ss_pred eEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEecCC-CC
Confidence 4567899999999998 5789999998722 224678899999999999999999999865 7899999997 68
Q ss_pred HHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc----
Q 003594 540 LRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC---- 615 (808)
Q Consensus 540 L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~---- 615 (808)
|.+++... .....+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||++..
T Consensus 85 l~~~~~~~-------~~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 154 (285)
T cd07861 85 LKKYLDSL-------PKGQYMDAELVKSYLYQILQGILFCHS---RRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIP 154 (285)
T ss_pred HHHHHhcC-------CCCCcCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCCHHHEEEcCCCcEEECcccceeecCCC
Confidence 99988543 233578999999999999999999999 5699999999999999999999999998642
Q ss_pred ----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhc----------H---------HH
Q 003594 616 ----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALD----------Q---------TT 654 (808)
Q Consensus 616 ----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~----------~---------~~ 654 (808)
..++.++|||||||++|+|+||++||.......... . ..
T Consensus 155 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (285)
T cd07861 155 VRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWPGVTSLPD 234 (285)
T ss_pred cccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhcchhhHH
Confidence 124678999999999999999999986321100000 0 00
Q ss_pred HHHHhcc----CCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 655 LMQVLDG----NAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 655 ~~~~ld~----~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
+...... ........++.++.+++.+||..| |..|||+.+|+.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d--P~~Rpt~~~ll~ 281 (285)
T cd07861 235 YKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYD--PAKRISAKKALN 281 (285)
T ss_pred HHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCC--hhhCCCHHHHhc
Confidence 0000000 000112246778899999999999 999999998874
No 238
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.97 E-value=5.3e-31 Score=277.39 Aligned_cols=212 Identities=24% Similarity=0.374 Sum_probs=175.8
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCCC-------CHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecC
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNGL-------SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMP 536 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~-------~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~ 536 (808)
+.+|.|+||.||+|.. ++..|++|.+.... ....+.+|+.+++.++||||+++++++.+ ..++||||++
T Consensus 6 ~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (258)
T cd06632 6 ELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIFLELVP 85 (258)
T ss_pred ceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEEEEecC
Confidence 5578999999999998 57999999986221 23578899999999999999999999865 7899999999
Q ss_pred CCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-
Q 003594 537 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC- 615 (808)
Q Consensus 537 ~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~- 615 (808)
+++|.+++. ....+++..+..++.||+.||.|||+ .+|+|+||+|+||+++.++.+||+|||++..
T Consensus 86 ~~~L~~~~~----------~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~ 152 (258)
T cd06632 86 GGSLAKLLK----------KYGSFPEPVIRLYTRQILLGLEYLHD---RNTVHRDIKGANILVDTNGVVKLADFGMAKQV 152 (258)
T ss_pred CCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEccCccceec
Confidence 999999994 33568999999999999999999999 5699999999999999999999999998742
Q ss_pred -----------------------CC-CCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhc-cCCCCCChhh
Q 003594 616 -----------------------DQ-LNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLD-GNAGIWPLDL 670 (808)
Q Consensus 616 -----------------------~~-~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld-~~~~~~p~~~ 670 (808)
.. ++.++|+||||+++|+|++|++||..... ......+.. ......+..+
T Consensus 153 ~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~-----~~~~~~~~~~~~~~~~~~~~ 227 (258)
T cd06632 153 VEFSFAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG-----VAAVFKIGRSKELPPIPDHL 227 (258)
T ss_pred cccccccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH-----HHHHHHHHhcccCCCcCCCc
Confidence 12 57789999999999999999999965321 111112222 2334456667
Q ss_pred HHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 671 AEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 671 ~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
+..+.+++.+||..+ |..||++.+++.
T Consensus 228 ~~~~~~li~~~l~~~--p~~Rp~~~~~l~ 254 (258)
T cd06632 228 SDEAKDFILKCLQRD--PSLRPTAAELLE 254 (258)
T ss_pred CHHHHHHHHHHhhcC--cccCcCHHHHhc
Confidence 899999999999999 999999998874
No 239
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.97 E-value=5.2e-31 Score=284.06 Aligned_cols=214 Identities=19% Similarity=0.284 Sum_probs=173.5
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccCCC--CHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCH
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNNGL--SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNL 540 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~--~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL 540 (808)
.+.+|.|+||.||+|.+ ++..||+|.+.... ....+.+|+.+++.++||||+++++++.. ..++||||+++++|
T Consensus 17 ~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l 96 (292)
T cd06644 17 IGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFCPGGAV 96 (292)
T ss_pred hheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecCCCCcH
Confidence 45578999999999998 57899999987332 23678899999999999999999998754 78999999999999
Q ss_pred HHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-----
Q 003594 541 RDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC----- 615 (808)
Q Consensus 541 ~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~----- 615 (808)
..++.. ....+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.+||+|||++..
T Consensus 97 ~~~~~~---------~~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~ 164 (292)
T cd06644 97 DAIMLE---------LDRGLTEPQIQVICRQMLEALQYLHS---MKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL 164 (292)
T ss_pred HHHHHh---------hcCCCCHHHHHHHHHHHHHHHHHHhc---CCeeecCCCcceEEEcCCCCEEEccCccceeccccc
Confidence 988743 23568999999999999999999999 5699999999999999999999999998642
Q ss_pred -------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCC--CCCCh
Q 003594 616 -------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNA--GIWPL 668 (808)
Q Consensus 616 -------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~--~~~p~ 668 (808)
..++.++|||||||++|+|++|.+||..... ......+..... ...+.
T Consensus 165 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~ 239 (292)
T cd06644 165 QRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP-----MRVLLKIAKSEPPTLSQPS 239 (292)
T ss_pred cccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH-----HHHHHHHhcCCCccCCCCc
Confidence 1135679999999999999999999865321 111222222211 12344
Q ss_pred hhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 669 DLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 669 ~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
.++.++.+++.+||..+ |..||++.++++
T Consensus 240 ~~~~~~~~li~~~l~~~--p~~Rp~~~~il~ 268 (292)
T cd06644 240 KWSMEFRDFLKTALDKH--PETRPSAAQLLE 268 (292)
T ss_pred ccCHHHHHHHHHHhcCC--cccCcCHHHHhc
Confidence 56788999999999999 999999988865
No 240
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.97 E-value=3.8e-31 Score=283.06 Aligned_cols=214 Identities=20% Similarity=0.306 Sum_probs=174.7
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCCC--CHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCHH
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNGL--SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNLR 541 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~--~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL~ 541 (808)
+.+|.|+||.||+|.+ ++..||+|.+.... ..+.|.+|+.++++++||||+++++++.+ ..++||||+++|+|.
T Consensus 11 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 90 (280)
T cd06611 11 GELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFCDGGALD 90 (280)
T ss_pred HHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeeccCCCcHH
Confidence 3457899999999998 57899999987332 34578899999999999999999999865 789999999999999
Q ss_pred HHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc------
Q 003594 542 DKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC------ 615 (808)
Q Consensus 542 ~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~------ 615 (808)
+++.. ....+++..+..++.|++.||.|||+ .+|+||||||+||+++.++.++|+|||++..
T Consensus 91 ~~~~~---------~~~~l~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~ 158 (280)
T cd06611 91 SIMLE---------LERGLTEPQIRYVCRQMLEALNFLHS---HKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQ 158 (280)
T ss_pred HHHHH---------hcCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEECCCCCEEEccCccchhhccccc
Confidence 99853 23569999999999999999999999 5699999999999999999999999998632
Q ss_pred ------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccC--CCCCChh
Q 003594 616 ------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGN--AGIWPLD 669 (808)
Q Consensus 616 ------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~--~~~~p~~ 669 (808)
..++.++||||||+++|+|++|++||..... ...+..+.... ....|..
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~ 233 (280)
T cd06611 159 KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNP-----MRVLLKILKSEPPTLDQPSK 233 (280)
T ss_pred ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCH-----HHHHHHHhcCCCCCcCCccc
Confidence 1145689999999999999999999865321 11122222221 1223446
Q ss_pred hHHHHHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 670 LAEELAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 670 ~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
++..+.+++.+||..+ |..||++.++++.
T Consensus 234 ~~~~~~~li~~~l~~~--p~~Rps~~~il~~ 262 (280)
T cd06611 234 WSSSFNDFLKSCLVKD--PDDRPTAAELLKH 262 (280)
T ss_pred CCHHHHHHHHHHhccC--hhhCcCHHHHhcC
Confidence 7789999999999999 9999999988753
No 241
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.97 E-value=5.5e-31 Score=285.28 Aligned_cols=218 Identities=21% Similarity=0.306 Sum_probs=170.4
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccC---CCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNN---GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGN 539 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~---~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gs 539 (808)
.+.+|.|+||.||+|.+ ++..||+|.+.. ......+.+|+.+++.++||||+++++++.+ ..++||||++ ++
T Consensus 11 ~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~~~-~~ 89 (301)
T cd07873 11 LDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KD 89 (301)
T ss_pred eeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEeccc-cC
Confidence 35678999999999988 578999999872 2234568899999999999999999999865 7899999997 69
Q ss_pred HHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc----
Q 003594 540 LRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC---- 615 (808)
Q Consensus 540 L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~---- 615 (808)
|.+++.. ....+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||++..
T Consensus 90 l~~~l~~---------~~~~~~~~~~~~~~~qi~~aL~~lH~---~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 157 (301)
T cd07873 90 LKQYLDD---------CGNSINMHNVKLFLFQLLRGLNYCHR---RKVLHRDLKPQNLLINERGELKLADFGLARAKSIP 157 (301)
T ss_pred HHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCHHHEEECCCCcEEECcCcchhccCCC
Confidence 9998853 23468899999999999999999999 5699999999999999999999999998742
Q ss_pred ----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhh----------cHHHHHHHhcc--
Q 003594 616 ----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMAL----------DQTTLMQVLDG-- 661 (808)
Q Consensus 616 ----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~----------~~~~~~~~ld~-- 661 (808)
..++.++|||||||++|+|+||++||......... ....+..++..
T Consensus 158 ~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (301)
T cd07873 158 TKTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWPGILSNEE 237 (301)
T ss_pred CCcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhchhhhcccc
Confidence 12567899999999999999999998642210000 00001111110
Q ss_pred ----CCCC--------CChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 662 ----NAGI--------WPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 662 ----~~~~--------~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
..+. ....++..+.+|+.+||..| |++|||+.+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~d--p~~R~t~~eil~ 285 (301)
T cd07873 238 FKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFE--GRKRISAEEAMK 285 (301)
T ss_pred ccccccCccccccHHhhcCCCCHHHHHHHHHHhcCC--cccCcCHHHHhc
Confidence 0000 11245678899999999999 999999999885
No 242
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.97 E-value=5.2e-31 Score=281.03 Aligned_cols=211 Identities=22% Similarity=0.309 Sum_probs=174.1
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCCC---CHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCH
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNGL---SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNL 540 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~---~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL 540 (808)
+.+|.|+||.||+|.+ ++..||+|.+.... ....+.+|+.+++.++||||+++++++.+ ..++|+||+++++|
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 86 (274)
T cd06609 7 ECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEYCGGGSC 86 (274)
T ss_pred hhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEeeCCCcH
Confidence 4567899999999998 57899999987332 23578899999999999999999999865 78999999999999
Q ss_pred HHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-----
Q 003594 541 RDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC----- 615 (808)
Q Consensus 541 ~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~----- 615 (808)
.+++. . ..+++..+..++.|++.||.|||+ .+++||||+|+||+++.++.++|+|||++..
T Consensus 87 ~~~~~----------~-~~~~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 152 (274)
T cd06609 87 LDLLK----------P-GKLDETYIAFILREVLLGLEYLHE---EGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM 152 (274)
T ss_pred HHHHh----------h-cCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEcccccceeecccc
Confidence 99983 2 278999999999999999999999 5699999999999999999999999998743
Q ss_pred --------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChh-hHHHH
Q 003594 616 --------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLD-LAEEL 674 (808)
Q Consensus 616 --------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~-~~~~l 674 (808)
..++.++||||||+++|+|+||++||..... ......+........+.. ++..+
T Consensus 153 ~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 227 (274)
T cd06609 153 SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHP-----MRVLFLIPKNNPPSLEGNKFSKPF 227 (274)
T ss_pred cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCch-----HHHHHHhhhcCCCCCcccccCHHH
Confidence 2357889999999999999999999965321 111222222223333333 77889
Q ss_pred HHHHHHhhccCCCcCccccHHhhHH
Q 003594 675 AGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 675 ~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
.+++.+||..+ |..||++.+++.
T Consensus 228 ~~~l~~~l~~~--p~~Rpt~~~il~ 250 (274)
T cd06609 228 KDFVSLCLNKD--PKERPSAKELLK 250 (274)
T ss_pred HHHHHHHhhCC--hhhCcCHHHHhh
Confidence 99999999999 999999999876
No 243
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.97 E-value=5e-31 Score=283.10 Aligned_cols=216 Identities=20% Similarity=0.276 Sum_probs=166.5
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCC----CCHHHHHHHHHHHhcc---CCCCccceeecccc-------ceEEE
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNG----LSEEDFQAKVSFLTAV---RHPHLVAVMGCCSE-------LKCIV 531 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~----~~~~~~~~Ei~il~~l---~HpnIv~l~g~~~~-------~~~lV 531 (808)
+.+|.|+||.||+|.. +++.||+|.+... .....+.+|+.++..+ +||||++++++|.. ..++|
T Consensus 6 ~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~~~~lv 85 (288)
T cd07863 6 AEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRETKVTLV 85 (288)
T ss_pred eEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCceEEEE
Confidence 5578999999999998 5789999998732 1234567788877766 79999999998743 46899
Q ss_pred EeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCC
Q 003594 532 FEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLG 611 (808)
Q Consensus 532 ~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfG 611 (808)
|||++ ++|.+++... ....+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 86 ~e~~~-~~l~~~~~~~--------~~~~~~~~~~~~~~~qi~~al~~lH~---~~ivH~dikp~Nili~~~~~~kl~dfg 153 (288)
T cd07863 86 FEHVD-QDLRTYLDKV--------PPPGLPAETIKDLMRQFLRGLDFLHA---NCIVHRDLKPENILVTSGGQVKLADFG 153 (288)
T ss_pred Ecccc-cCHHHHHHhc--------CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECccC
Confidence 99997 5899988532 23458999999999999999999999 569999999999999999999999999
Q ss_pred Cccc------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhc-cCCC--
Q 003594 612 LNIC------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLD-GNAG-- 664 (808)
Q Consensus 612 la~~------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld-~~~~-- 664 (808)
++.. ..++.++|||||||++|+|++|++||....... .......... +...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~--~~~~~~~~~~~~~~~~~ 231 (288)
T cd07863 154 LARIYSCQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEAD--QLGKIFDLIGLPPEDDW 231 (288)
T ss_pred ccccccCcccCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHH--HHHHHHHHhCCCChhhC
Confidence 8742 236788999999999999999999985422110 0000000000 0000
Q ss_pred --------------------CCChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 665 --------------------IWPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 665 --------------------~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
.....++..+.+|+.+||+.| |..|||+.+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d--P~~R~t~~~~l~ 284 (288)
T cd07863 232 PRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFN--PHKRISAFRALQ 284 (288)
T ss_pred cccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccC--cccCCCHHHHhc
Confidence 011245678899999999999 999999988874
No 244
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.97 E-value=5.2e-31 Score=282.30 Aligned_cols=230 Identities=19% Similarity=0.283 Sum_probs=181.6
Q ss_pred cCHHHHHHhhccccccccccccCCceEEEEEEE--CCeEEEEEEccCC-CCHHHHHHHHHHHhcc-CCCCccceeeccc-
Q 003594 451 YAAEDIRLATEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNG-LSEEDFQAKVSFLTAV-RHPHLVAVMGCCS- 525 (808)
Q Consensus 451 ~~~~ei~~at~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~- 525 (808)
.+..++..+.+.|... ..+|.|+||.||+|.+ ++..||+|++... .....+..|+.++.++ +||||+++++++.
T Consensus 6 ~~~~~~~~~~~~~~~~-~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 6 IDLSALRDPAGIFELV-EVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhhhcChhhhhhhh-eeeccCCCeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 3555666666777665 4567899999999998 5789999998732 3446788999999999 7999999999983
Q ss_pred -------cceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcc
Q 003594 526 -------ELKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSIL 598 (808)
Q Consensus 526 -------~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NIL 598 (808)
+..|+||||+++|+|.+++... ....+++..+..++.||+.||.|||+ .+|+||||||+||+
T Consensus 85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~--------~~~~~~~~~~~~~~~qi~~al~~LH~---~~ivH~dl~~~nil 153 (282)
T cd06636 85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNT--------KGNALKEDWIAYICREILRGLAHLHA---HKVIHRDIKGQNVL 153 (282)
T ss_pred ccccCCCCEEEEEEEeCCCCcHHHHHHHc--------cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEE
Confidence 2578999999999999999543 23458899999999999999999999 56999999999999
Q ss_pred cCCCccEEEEeCCCccc------------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHh
Q 003594 599 LDRNLVAKISGLGLNIC------------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAM 648 (808)
Q Consensus 599 ld~~~~~kl~DfGla~~------------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~ 648 (808)
++.++.++|+|||++.. ..++.++|||||||++|+|++|.+||.....
T Consensus 154 i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~-- 231 (282)
T cd06636 154 LTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHP-- 231 (282)
T ss_pred ECCCCCEEEeeCcchhhhhccccCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCH--
Confidence 99999999999998642 1245689999999999999999999864321
Q ss_pred hhcHHHHHHHhccCC-CCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 649 ALDQTTLMQVLDGNA-GIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 649 ~~~~~~~~~~ld~~~-~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
......+..... ...+..++..+.+|+.+||..| |..||++.++++
T Consensus 232 ---~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~--p~~Rp~~~ell~ 278 (282)
T cd06636 232 ---MRALFLIPRNPPPKLKSKKWSKKFIDFIEGCLVKN--YLSRPSTEQLLK 278 (282)
T ss_pred ---HhhhhhHhhCCCCCCcccccCHHHHHHHHHHhCCC--hhhCcCHHHHhc
Confidence 111111222111 1122356789999999999999 999999998864
No 245
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.97 E-value=5.9e-31 Score=279.55 Aligned_cols=217 Identities=20% Similarity=0.318 Sum_probs=173.5
Q ss_pred cccccccccccCCceEEEEEEE--CCeEEEEEEccCC----C---CHHHHHHHHHHHhccCCCCccceeecccc----ce
Q 003594 462 DFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNG----L---SEEDFQAKVSFLTAVRHPHLVAVMGCCSE----LK 528 (808)
Q Consensus 462 ~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~----~---~~~~~~~Ei~il~~l~HpnIv~l~g~~~~----~~ 528 (808)
+|... .++|.|+||.||+|.. ++..||+|.+... . ....+.+|+.+++.++||||+++++++.+ ..
T Consensus 3 ~~~~~-~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 3 NWRRG-KLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred Ccccc-ceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 44443 4568999999999997 5789999998621 1 12468889999999999999999998753 56
Q ss_pred EEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEE
Q 003594 529 CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKIS 608 (808)
Q Consensus 529 ~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~ 608 (808)
+++|||+++++|.+++. ....+++...+.++.|++.||.|||+ .+|+||||||+||+++.++.+||+
T Consensus 82 ~l~~e~~~~~~L~~~l~----------~~~~l~~~~~~~~~~qi~~~l~~LH~---~~i~H~~l~p~nil~~~~~~~~l~ 148 (266)
T cd06651 82 TIFMEYMPGGSVKDQLK----------AYGALTESVTRKYTRQILEGMSYLHS---NMIVHRDIKGANILRDSAGNVKLG 148 (266)
T ss_pred EEEEeCCCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEEEc
Confidence 89999999999999994 33458999999999999999999999 569999999999999999999999
Q ss_pred eCCCccc----------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhc
Q 003594 609 GLGLNIC----------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLD 660 (808)
Q Consensus 609 DfGla~~----------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld 660 (808)
|||++.. ..++.++|||||||++|+|++|++||...... .........
T Consensus 149 dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~----~~~~~~~~~ 224 (266)
T cd06651 149 DFGASKRLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAM----AAIFKIATQ 224 (266)
T ss_pred cCCCccccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchH----HHHHHHhcC
Confidence 9998742 12467899999999999999999999753221 111112222
Q ss_pred cCCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 661 GNAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 661 ~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
+..+..|...++.+.+++ +||..+ |..||++.+|+.
T Consensus 225 ~~~~~~~~~~~~~~~~li-~~~~~~--p~~Rp~~~eil~ 260 (266)
T cd06651 225 PTNPQLPSHISEHARDFL-GCIFVE--ARHRPSAEELLR 260 (266)
T ss_pred CCCCCCchhcCHHHHHHH-HHhcCC--hhhCcCHHHHhc
Confidence 334555666778888888 788888 999999999874
No 246
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.97 E-value=9e-31 Score=276.52 Aligned_cols=217 Identities=23% Similarity=0.263 Sum_probs=173.5
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCC--CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCHH
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNG--LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNLR 541 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~--~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL~ 541 (808)
+.+|.|+||.||+|.. ++..+++|.+... ...+.+.+|+.++++++||||+++++++.+ ..|++|||+++++|.
T Consensus 9 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~~~~~l~ 88 (262)
T cd06613 9 QRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYCGGGSLQ 88 (262)
T ss_pred EEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCCCCCcHH
Confidence 5568999999999998 5688999998732 245789999999999999999999998855 789999999999999
Q ss_pred HHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc------
Q 003594 542 DKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC------ 615 (808)
Q Consensus 542 ~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~------ 615 (808)
+++.. ....+++..+..++.|++.||.|||+ .+|+|+||||+||+++.++.+||+|||++..
T Consensus 89 ~~~~~---------~~~~l~~~~~~~~~~ql~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~ 156 (262)
T cd06613 89 DIYQV---------TRGPLSELQIAYVCRETLKGLAYLHE---TGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIA 156 (262)
T ss_pred HHHHh---------hccCCCHHHHHHHHHHHHHHHHHHHh---CCceecCCChhhEEECCCCCEEECccccchhhhhhhh
Confidence 99842 22568999999999999999999999 5699999999999999999999999997632
Q ss_pred -------------------C---CCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHH
Q 003594 616 -------------------D---QLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEE 673 (808)
Q Consensus 616 -------------------~---~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~ 673 (808)
. .++.++||||||+++|+|+||.+||............ ......+.....+...+.+
T Consensus 157 ~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 235 (262)
T cd06613 157 KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRALFLI-SKSNFPPPKLKDKEKWSPV 235 (262)
T ss_pred ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-HhccCCCccccchhhhhHH
Confidence 2 4566899999999999999999998653221000000 0000011112233456788
Q ss_pred HHHHHHHhhccCCCcCccccHHhhHH
Q 003594 674 LAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 674 l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
+.+++.+||..+ |..||++.+|+.
T Consensus 236 ~~~li~~~l~~~--p~~Rpt~~~il~ 259 (262)
T cd06613 236 FHDFIKKCLTKD--PKKRPTATKLLQ 259 (262)
T ss_pred HHHHHHHHcCCC--hhhCCCHHHHhc
Confidence 999999999999 999999998874
No 247
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.97 E-value=1.7e-31 Score=297.20 Aligned_cols=207 Identities=18% Similarity=0.269 Sum_probs=167.1
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccC-----CCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNN-----GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPN 537 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~-----~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~ 537 (808)
.+.+|.|+||.||++.. ++..||||++.. ......+.+|+.++..++||||+++++++.+ ..||||||++|
T Consensus 6 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~E~~~g 85 (360)
T cd05627 6 LKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIMEFLPG 85 (360)
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEEeCCCC
Confidence 46678999999999998 578999999972 2234568889999999999999999999865 78999999999
Q ss_pred CCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--
Q 003594 538 GNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-- 615 (808)
Q Consensus 538 gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-- 615 (808)
|+|.+++. ....+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||++..
T Consensus 86 g~L~~~l~----------~~~~l~~~~~~~~~~qi~~~L~~lH~---~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~ 152 (360)
T cd05627 86 GDMMTLLM----------KKDTLSEEATQFYIAETVLAIDAIHQ---LGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLK 152 (360)
T ss_pred ccHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHH---CCeEccCCCHHHEEECCCCCEEEeeccCCcccc
Confidence 99999994 34568999999999999999999999 6699999999999999999999999998631
Q ss_pred ----------------------------------------------------------CCCCcchhhHhHHHHHHHHHcC
Q 003594 616 ----------------------------------------------------------DQLNVRSDIRAFGTLLLHLLTG 637 (808)
Q Consensus 616 ----------------------------------------------------------~~~t~ksDVwS~Gvil~elltG 637 (808)
..++.++|||||||++|||+||
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG 232 (360)
T cd05627 153 KAHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIG 232 (360)
T ss_pred cccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccC
Confidence 2367789999999999999999
Q ss_pred CCCchhhHHHhhhcHHHHHHHhcc-CCCCCCh--hhHHHHHHHHHHhhccCCCcCccccH
Q 003594 638 RNWAGLVEKAMALDQTTLMQVLDG-NAGIWPL--DLAEELAGIALKCLSADQDANRDLRI 694 (808)
Q Consensus 638 ~~P~~~~~~~~~~~~~~~~~~ld~-~~~~~p~--~~~~~l~~Li~~Cl~~dp~p~~Rps~ 694 (808)
++||..... ...+..+... ....+|. ..+.++.+|+.+|+. | |.+|++.
T Consensus 233 ~~Pf~~~~~-----~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~l~~-~--p~~R~~~ 284 (360)
T cd05627 233 YPPFCSETP-----QETYRKVMNWKETLVFPPEVPISEKAKDLILRFCT-D--SENRIGS 284 (360)
T ss_pred CCCCCCCCH-----HHHHHHHHcCCCceecCCCCCCCHHHHHHHHHhcc-C--hhhcCCC
Confidence 999965321 1222233321 1122232 367889999999774 7 7778763
No 248
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=99.97 E-value=6.2e-31 Score=290.47 Aligned_cols=216 Identities=17% Similarity=0.248 Sum_probs=166.9
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccCCC----CHHHHHHHHHHHhccCCCCccceeecccc--------ceEEEE
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNNGL----SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--------LKCIVF 532 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~----~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--------~~~lV~ 532 (808)
.+.+|.|+||.||+|.. ++..||||++.... ....+.+|+.+|++++||||+++++++.. ..|+++
T Consensus 20 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~ 99 (343)
T cd07878 20 LTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIENFNEVYLVT 99 (343)
T ss_pred heecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccccccCcEEEEe
Confidence 35678999999999987 57899999987321 23567899999999999999999998742 468999
Q ss_pred eecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCC
Q 003594 533 EYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 612 (808)
Q Consensus 533 Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGl 612 (808)
+++ +++|.+++. ...+++..+..|+.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 100 ~~~-~~~l~~~~~-----------~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivHrdikp~Nil~~~~~~~kl~Dfg~ 164 (343)
T cd07878 100 NLM-GADLNNIVK-----------CQKLSDEHVQFLIYQLLRGLKYIHS---AGIIHRDLKPSNVAVNEDCELRILDFGL 164 (343)
T ss_pred ecC-CCCHHHHHh-----------cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecccCChhhEEECCCCCEEEcCCcc
Confidence 998 789988873 2458999999999999999999999 5699999999999999999999999998
Q ss_pred ccc-----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhh----------cHHHH----
Q 003594 613 NIC-----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMAL----------DQTTL---- 655 (808)
Q Consensus 613 a~~-----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~----------~~~~~---- 655 (808)
+.. ..++.++|||||||++|+|++|++||......... ....+
T Consensus 165 ~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (343)
T cd07878 165 ARQADDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPEVLKKIS 244 (343)
T ss_pred ceecCCCcCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCHHHHHhcc
Confidence 753 13577899999999999999999998532110000 00000
Q ss_pred ----HHHhccCCCCCC--------hhhHHHHHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 656 ----MQVLDGNAGIWP--------LDLAEELAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 656 ----~~~ld~~~~~~p--------~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
...+.. .+..+ ...++.+.+|+.+||..| |..|||+.+++..
T Consensus 245 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~li~~mL~~d--p~~R~s~~ell~h 298 (343)
T cd07878 245 SEHARKYIQS-LPHMPQQDLKKIFRGANPLAIDLLEKMLVLD--SDKRISASEALAH 298 (343)
T ss_pred hhhHHHHhhc-cccccchhHHHhccCCCHHHHHHHHHHcCCC--hhhCCCHHHHhcC
Confidence 000000 01111 123456889999999999 9999999998853
No 249
>PTZ00284 protein kinase; Provisional
Probab=99.97 E-value=3.8e-31 Score=304.61 Aligned_cols=230 Identities=18% Similarity=0.257 Sum_probs=168.3
Q ss_pred HHHHHhhccccccccccccCCceEEEEEEE--CCeEEEEEEccCC-CCHHHHHHHHHHHhccCCC------Cccceeecc
Q 003594 454 EDIRLATEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNG-LSEEDFQAKVSFLTAVRHP------HLVAVMGCC 524 (808)
Q Consensus 454 ~ei~~at~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-~~~~~~~~Ei~il~~l~Hp------nIv~l~g~~ 524 (808)
+++...+++|.. .+.+|.|+||.||+|.+ ++..||||+++.. .....+..|+.++..++|. ++++++++|
T Consensus 122 ~~~~~~~~~y~i-~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~ 200 (467)
T PTZ00284 122 EDIDVSTQRFKI-LSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYF 200 (467)
T ss_pred CccccCCCcEEE-EEEEEeccCEEEEEEEEcCCCeEEEEEEEecchhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEE
Confidence 344445666665 45678999999999998 5789999999732 2334567788888877654 588888888
Q ss_pred cc---ceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCC
Q 003594 525 SE---LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDR 601 (808)
Q Consensus 525 ~~---~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~ 601 (808)
.. ..||||+++ +++|.+++. ....+++..+..|+.||+.||.|||+. .+||||||||+|||++.
T Consensus 201 ~~~~~~~~iv~~~~-g~~l~~~l~----------~~~~l~~~~~~~i~~qi~~aL~yLH~~--~gIiHrDlKP~NILl~~ 267 (467)
T PTZ00284 201 QNETGHMCIVMPKY-GPCLLDWIM----------KHGPFSHRHLAQIIFQTGVALDYFHTE--LHLMHTDLKPENILMET 267 (467)
T ss_pred EcCCceEEEEEecc-CCCHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHhc--CCeecCCCCHHHEEEec
Confidence 54 678999998 789999884 335699999999999999999999973 26999999999999987
Q ss_pred Cc----------------cEEEEeCCCccc----------------------CCCCcchhhHhHHHHHHHHHcCCCCchh
Q 003594 602 NL----------------VAKISGLGLNIC----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGL 643 (808)
Q Consensus 602 ~~----------------~~kl~DfGla~~----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~ 643 (808)
++ .+||+|||++.. ..++.++|||||||+||||+||++||..
T Consensus 268 ~~~~~~~~~~~~~~~~~~~vkl~DfG~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~ 347 (467)
T PTZ00284 268 SDTVVDPVTNRALPPDPCRVRICDLGGCCDERHSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDT 347 (467)
T ss_pred CCcccccccccccCCCCceEEECCCCccccCccccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 65 499999997632 2478899999999999999999999964
Q ss_pred hHHHhh---h-------cHH--------HHHHHhcc---CCCCC-C--------------hhhHHHHHHHHHHhhccCCC
Q 003594 644 VEKAMA---L-------DQT--------TLMQVLDG---NAGIW-P--------------LDLAEELAGIALKCLSADQD 687 (808)
Q Consensus 644 ~~~~~~---~-------~~~--------~~~~~ld~---~~~~~-p--------------~~~~~~l~~Li~~Cl~~dp~ 687 (808)
...... . ... ....+.+. ..... + ......+.+||.+||.+|
T Consensus 348 ~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~d-- 425 (467)
T PTZ00284 348 HDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYD-- 425 (467)
T ss_pred CChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcC--
Confidence 221000 0 000 00000000 00000 0 012356789999999999
Q ss_pred cCccccHHhhHH
Q 003594 688 ANRDLRIAGVMK 699 (808)
Q Consensus 688 p~~Rps~~evl~ 699 (808)
|..|||+.|+++
T Consensus 426 P~~R~ta~e~L~ 437 (467)
T PTZ00284 426 RQKRLNARQMTT 437 (467)
T ss_pred hhhCCCHHHHhc
Confidence 999999999985
No 250
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=99.97 E-value=5.3e-31 Score=279.70 Aligned_cols=212 Identities=18% Similarity=0.226 Sum_probs=170.4
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCC--CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCHH
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNG--LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNLR 541 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~--~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL~ 541 (808)
+.+|.|+||.||+|.. ++..||+|.++.. .....+.+|+.++..++||||+++++++.+ ..++||||+++++|.
T Consensus 15 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~ 94 (267)
T cd06645 15 QRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFCGGGSLQ 94 (267)
T ss_pred HHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEeccCCCcHH
Confidence 4568999999999998 5789999998733 223568889999999999999999998854 789999999999999
Q ss_pred HHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc------
Q 003594 542 DKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC------ 615 (808)
Q Consensus 542 ~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~------ 615 (808)
+++. ....+++..+..++.|++.||.|||+ .+|+|+||||+||+++.++.+||+|||++..
T Consensus 95 ~~~~----------~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~ 161 (267)
T cd06645 95 DIYH----------VTGPLSESQIAYVSRETLQGLYYLHS---KGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIA 161 (267)
T ss_pred HHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEECcceeeeEccCccc
Confidence 9984 34568999999999999999999999 5699999999999999999999999998631
Q ss_pred ----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhcc-C-CCC--CChh
Q 003594 616 ----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDG-N-AGI--WPLD 669 (808)
Q Consensus 616 ----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~-~-~~~--~p~~ 669 (808)
..++.++|||||||++|+|++|.+||...... ......... . ... ....
T Consensus 162 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 236 (267)
T cd06645 162 KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPM-----RALFLMTKSNFQPPKLKDKMK 236 (267)
T ss_pred ccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccch-----hhHHhhhccCCCCCcccccCC
Confidence 12557899999999999999999998542210 111111111 1 111 1124
Q ss_pred hHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 670 LAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 670 ~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
++..+.+++.+||..+ |..||++.+|+.
T Consensus 237 ~~~~~~~li~~~l~~~--P~~R~~~~~ll~ 264 (267)
T cd06645 237 WSNSFHHFVKMALTKN--PKKRPTAEKLLQ 264 (267)
T ss_pred CCHHHHHHHHHHccCC--chhCcCHHHHhc
Confidence 5678999999999999 999999988864
No 251
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=99.97 E-value=3.9e-31 Score=286.24 Aligned_cols=211 Identities=19% Similarity=0.270 Sum_probs=172.7
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccC--CCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCHH
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNN--GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNLR 541 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~--~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL~ 541 (808)
+.+|.|+||.||+|.. ++..||+|.+.. ....+.+.+|+.+++.++||||++++++|.. ..++||||+++++|.
T Consensus 25 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 104 (297)
T cd06656 25 EKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLT 104 (297)
T ss_pred eeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecccCCCCHH
Confidence 4568899999999997 689999999873 2334678899999999999999999999865 789999999999999
Q ss_pred HHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc------
Q 003594 542 DKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC------ 615 (808)
Q Consensus 542 ~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~------ 615 (808)
+++. ...+++..+..++.|++.||.|||+ .+|+||||||+|||++.++.++|+|||++..
T Consensus 105 ~~~~-----------~~~~~~~~~~~~~~~l~~~L~~LH~---~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~ 170 (297)
T cd06656 105 DVVT-----------ETCMDEGQIAAVCRECLQALDFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 170 (297)
T ss_pred HHHH-----------hCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEECcCccceEccCCcc
Confidence 9983 2357899999999999999999999 5699999999999999999999999998642
Q ss_pred -------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhc-c-CCCCCChhhHHHH
Q 003594 616 -------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLD-G-NAGIWPLDLAEEL 674 (808)
Q Consensus 616 -------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld-~-~~~~~p~~~~~~l 674 (808)
..++.++|||||||++|+|++|.+||...... .....+.. + .....|...+..+
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 245 (297)
T cd06656 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL-----RALYLIATNGTPELQNPERLSAVF 245 (297)
T ss_pred CcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcc-----hheeeeccCCCCCCCCccccCHHH
Confidence 23567899999999999999999999643210 11111111 1 1122345667889
Q ss_pred HHHHHHhhccCCCcCccccHHhhHH
Q 003594 675 AGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 675 ~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
.+|+.+||..+ |..||++.+++.
T Consensus 246 ~~li~~~l~~~--p~~Rps~~~il~ 268 (297)
T cd06656 246 RDFLNRCLEMD--VDRRGSAKELLQ 268 (297)
T ss_pred HHHHHHHccCC--hhhCcCHHHHhc
Confidence 99999999999 889999998886
No 252
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.97 E-value=8.5e-31 Score=277.98 Aligned_cols=217 Identities=19% Similarity=0.277 Sum_probs=174.0
Q ss_pred cccccccccccCCceEEEEEEE--CCeEEEEEEccCC----CC---HHHHHHHHHHHhccCCCCccceeecccc----ce
Q 003594 462 DFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNG----LS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE----LK 528 (808)
Q Consensus 462 ~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~----~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~----~~ 528 (808)
+|.. .+++|+|+||.||+|.. +|..||||.+... .. ...+.+|+.++.+++||||+++++++.+ ..
T Consensus 3 ~~~~-~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 3 NWRL-GKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred cceE-eeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 4444 35667899999999997 5789999988621 11 2468889999999999999999998854 46
Q ss_pred EEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEE
Q 003594 529 CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKIS 608 (808)
Q Consensus 529 ~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~ 608 (808)
++||||+++|+|.+++. ....+++.....++.|++.||.|||+ .+|+|+||||+|||++.++.++|+
T Consensus 82 ~~v~e~~~~~~L~~~l~----------~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~l~ 148 (265)
T cd06652 82 SIFMEHMPGGSIKDQLK----------SYGALTENVTRKYTRQILEGVSYLHS---NMIVHRDIKGANILRDSVGNVKLG 148 (265)
T ss_pred EEEEEecCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEecCCCCEEEC
Confidence 79999999999999994 33458899999999999999999999 569999999999999999999999
Q ss_pred eCCCccc----------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhc
Q 003594 609 GLGLNIC----------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLD 660 (808)
Q Consensus 609 DfGla~~----------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld 660 (808)
|||++.. ..++.++|||||||++|+|++|++||...... .........
T Consensus 149 Dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~----~~~~~~~~~ 224 (265)
T cd06652 149 DFGASKRLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM----AAIFKIATQ 224 (265)
T ss_pred cCccccccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH----HHHHHHhcC
Confidence 9997741 13567899999999999999999998653221 111111222
Q ss_pred cCCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 661 GNAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 661 ~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
+..+..|...+..+.+++.+||. + |..||++.+|+.
T Consensus 225 ~~~~~~~~~~~~~~~~~i~~~l~-~--p~~Rp~~~~il~ 260 (265)
T cd06652 225 PTNPVLPPHVSDHCRDFLKRIFV-E--AKLRPSADELLR 260 (265)
T ss_pred CCCCCCchhhCHHHHHHHHHHhc-C--hhhCCCHHHHhc
Confidence 33455667778899999999994 7 899999988874
No 253
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.97 E-value=3.8e-31 Score=285.67 Aligned_cols=212 Identities=17% Similarity=0.186 Sum_probs=172.2
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCC--CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCHH
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNG--LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNLR 541 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~--~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL~ 541 (808)
..+|.|+||.||++.. ++..||||.+... ...+.+.+|+.+++.++||||+++++.+.. ..++||||+++++|.
T Consensus 28 ~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~L~ 107 (292)
T cd06658 28 IKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGALT 107 (292)
T ss_pred hcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCcHH
Confidence 4568899999999997 5789999998632 224568899999999999999999998854 789999999999999
Q ss_pred HHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc------
Q 003594 542 DKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC------ 615 (808)
Q Consensus 542 ~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~------ 615 (808)
+++. ...+++..+..++.||+.||.|||+ .+|+||||||+||+++.++.++|+|||++..
T Consensus 108 ~~~~-----------~~~l~~~~~~~~~~qi~~~l~~LH~---~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~ 173 (292)
T cd06658 108 DIVT-----------HTRMNEEQIATVCLSVLRALSYLHN---QGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP 173 (292)
T ss_pred HHHh-----------cCCCCHHHHHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccc
Confidence 9883 2358899999999999999999999 5699999999999999999999999998742
Q ss_pred -------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhcc--CCCCCChhhHHHH
Q 003594 616 -------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDG--NAGIWPLDLAEEL 674 (808)
Q Consensus 616 -------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~--~~~~~p~~~~~~l 674 (808)
..++.++||||||+++|||++|+.||...... ..+..+... .........+..+
T Consensus 174 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 248 (292)
T cd06658 174 KRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPL-----QAMRRIRDNLPPRVKDSHKVSSVL 248 (292)
T ss_pred cCceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHhcCCCccccccccCHHH
Confidence 23578899999999999999999998643221 111112111 1111223467789
Q ss_pred HHHHHHhhccCCCcCccccHHhhHHH
Q 003594 675 AGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 675 ~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
.+++.+||..| |..|||+.++++.
T Consensus 249 ~~li~~~l~~~--P~~Rpt~~~il~~ 272 (292)
T cd06658 249 RGFLDLMLVRE--PSQRATAQELLQH 272 (292)
T ss_pred HHHHHHHccCC--hhHCcCHHHHhhC
Confidence 99999999999 9999999998863
No 254
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.97 E-value=8.1e-31 Score=292.10 Aligned_cols=222 Identities=18% Similarity=0.223 Sum_probs=169.0
Q ss_pred hccccccccccccCCceEEEEEEE--CCeEEEEEEccCC----CCHHHHHHHHHHHhccCCCCccceeecccc-------
Q 003594 460 TEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNG----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE------- 526 (808)
Q Consensus 460 t~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~------- 526 (808)
.++|... +.+|+|+||.||++.. .++.||||++... .....+.+|+.+++.++||||+++++++..
T Consensus 23 ~~~y~~~-~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 23 LKRYQNL-KPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hcceeEE-EEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 3455443 5678999999999998 5789999999732 223578899999999999999999998742
Q ss_pred -ceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccE
Q 003594 527 -LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVA 605 (808)
Q Consensus 527 -~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~ 605 (808)
..|+||||++ ++|.+.+. ..+++..+..++.|++.||.|||+ .+|+||||||+|||++.++.+
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~------------~~~~~~~~~~~~~qi~~aL~~LH~---~~ivH~Dlkp~NIll~~~~~~ 165 (364)
T cd07875 102 QDVYIVMELMD-ANLCQVIQ------------MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTL 165 (364)
T ss_pred CeEEEEEeCCC-CCHHHHHH------------hcCCHHHHHHHHHHHHHHHHHHhh---CCeecCCCCHHHEEECCCCcE
Confidence 4699999997 57887772 237889999999999999999999 569999999999999999999
Q ss_pred EEEeCCCccc------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhc----------
Q 003594 606 KISGLGLNIC------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALD---------- 651 (808)
Q Consensus 606 kl~DfGla~~------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~---------- 651 (808)
||+|||+++. ..++.++|||||||++|+|++|+.||..........
T Consensus 166 kL~DfG~a~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~ 245 (364)
T cd07875 166 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPC 245 (364)
T ss_pred EEEeCCCccccCCCCcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence 9999999853 235789999999999999999999996422100000
Q ss_pred -------HHHHHHHhccC-------------------CCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 652 -------QTTLMQVLDGN-------------------AGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 652 -------~~~~~~~ld~~-------------------~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
........... ....+......+.+|+.+||..| |..|||+.+++..
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~d--P~~R~t~~e~L~h 318 (364)
T cd07875 246 PEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVID--ASKRISVDEALQH 318 (364)
T ss_pred HHHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcC--cccCCCHHHHhcC
Confidence 00000000000 00111123457899999999999 9999999988753
No 255
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.97 E-value=9.9e-31 Score=280.12 Aligned_cols=217 Identities=19% Similarity=0.244 Sum_probs=169.4
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCC----CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCC
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNG----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGN 539 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gs 539 (808)
..+|.|+||.||+|.+ +|..||+|++... ...+.+.+|+.++++++||||+++++++.. ..++||||+++++
T Consensus 7 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e~~~~~~ 86 (286)
T cd07847 7 SKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFEYCDHTV 86 (286)
T ss_pred eeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEeccCccH
Confidence 4568899999999998 5799999998622 223568899999999999999999999865 6789999999988
Q ss_pred HHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc----
Q 003594 540 LRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC---- 615 (808)
Q Consensus 540 L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~---- 615 (808)
|..++. ....+++..+..++.||+.||.|||+ .+|+||||||+||+++.++.+||+|||++..
T Consensus 87 l~~~~~----------~~~~~~~~~~~~~~~ql~~~l~~LH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07847 87 LNELEK----------NPRGVPEHLIKKIIWQTLQAVNFCHK---HNCIHRDVKPENILITKQGQIKLCDFGFARILTGP 153 (286)
T ss_pred HHHHHh----------CCCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCChhhEEEcCCCcEEECccccceecCCC
Confidence 888773 34568999999999999999999999 6699999999999999999999999998742
Q ss_pred ----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhc--HHH-------HHHHhcc---
Q 003594 616 ----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALD--QTT-------LMQVLDG--- 661 (808)
Q Consensus 616 ----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~--~~~-------~~~~ld~--- 661 (808)
..++.++||||||+++|+|++|.+||.......... ... ...+.+.
T Consensus 154 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (286)
T cd07847 154 GDDYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLGDLIPRHQQIFSTNQF 233 (286)
T ss_pred cccccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChHHhhhcccccc
Confidence 124678999999999999999999986422110000 000 0000000
Q ss_pred ---CCCCC----------ChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 662 ---NAGIW----------PLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 662 ---~~~~~----------p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
...+. ....+..+.+|+.+||..+ |..||++.+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~--p~~Rp~~~eil~ 282 (286)
T cd07847 234 FKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMD--PTERLSCEELLE 282 (286)
T ss_pred cccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCC--ccccCCHHHHhc
Confidence 00000 1134678999999999999 999999998874
No 256
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=6.2e-31 Score=282.01 Aligned_cols=215 Identities=19% Similarity=0.275 Sum_probs=183.7
Q ss_pred cccccccccCCceEEEEEEE--CCeEEEEEEcc----CCCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeec
Q 003594 464 SERFRLKCAGDWTNVYRGRL--NHASVAIKTLN----NGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYM 535 (808)
Q Consensus 464 ~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~----~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~ 535 (808)
++..+-+|+|.|+.|-++++ +|..||||++. +......+.+|++.|+.++|||||+||.+... .+|||+|+-
T Consensus 20 YDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiLELG 99 (864)
T KOG4717|consen 20 YDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLILELG 99 (864)
T ss_pred ehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEEEec
Confidence 33345678999999999986 99999999998 33445789999999999999999999999855 789999999
Q ss_pred CCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccC-CCccEEEEeCCCcc
Q 003594 536 PNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLD-RNLVAKISGLGLNI 614 (808)
Q Consensus 536 ~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld-~~~~~kl~DfGla~ 614 (808)
++|+|+|||-.+ ...+.+..+.+++.||+.|+.|.|. ..+|||||||+|+++- .-|-+||.|||++.
T Consensus 100 D~GDl~DyImKH---------e~Gl~E~La~kYF~QI~~AI~YCHq---LHVVHRDLKPENVVFFEKlGlVKLTDFGFSN 167 (864)
T KOG4717|consen 100 DGGDLFDYIMKH---------EEGLNEDLAKKYFAQIVHAISYCHQ---LHVVHRDLKPENVVFFEKLGLVKLTDFGFSN 167 (864)
T ss_pred CCchHHHHHHhh---------hccccHHHHHHHHHHHHHHHHHHhh---hhhhcccCCcceeEEeeecCceEeeeccccc
Confidence 999999999754 4568999999999999999999999 5599999999999875 55899999999984
Q ss_pred c------------------------CCC-CcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChh
Q 003594 615 C------------------------DQL-NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLD 669 (808)
Q Consensus 615 ~------------------------~~~-t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~ 669 (808)
. ..| .+++||||||||||.|++|++||... .+.+.+..++|.. ...|..
T Consensus 168 kf~PG~kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeA-----NDSETLTmImDCK-YtvPsh 241 (864)
T KOG4717|consen 168 KFQPGKKLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEA-----NDSETLTMIMDCK-YTVPSH 241 (864)
T ss_pred cCCCcchhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccc-----cchhhhhhhhccc-ccCchh
Confidence 2 112 47899999999999999999999764 5567788888764 356789
Q ss_pred hHHHHHHHHHHhhccCCCcCccccHHhhH
Q 003594 670 LAEELAGIALKCLSADQDANRDLRIAGVM 698 (808)
Q Consensus 670 ~~~~l~~Li~~Cl~~dp~p~~Rps~~evl 698 (808)
++.+..+||..||..| |.+|.+..+|.
T Consensus 242 vS~eCrdLI~sMLvRd--PkkRAslEeI~ 268 (864)
T KOG4717|consen 242 VSKECRDLIQSMLVRD--PKKRASLEEIV 268 (864)
T ss_pred hhHHHHHHHHHHHhcC--chhhccHHHHh
Confidence 9999999999999999 88998855543
No 257
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-32 Score=278.62 Aligned_cols=231 Identities=16% Similarity=0.236 Sum_probs=188.6
Q ss_pred ccCHHHHHHhhccccccccccccCCceEEEEEEE--CCeEEEEEEccCCCCHHHHHHHHHHHhccCCCCccceeecccc-
Q 003594 450 EYAAEDIRLATEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE- 526 (808)
Q Consensus 450 ~~~~~ei~~at~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~- 526 (808)
+++-+-+........+....+|.|+||.||++.+ .|..||||.+....+.+++..|+.||.++..|++|++||.+..
T Consensus 21 KLd~~sL~K~PEEVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~ 100 (502)
T KOG0574|consen 21 KLDSSALNKPPEEVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVDTDLQEIIKEISIMQQCKSKYVVKYYGSYFKH 100 (502)
T ss_pred ccChhhhcCChHHHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCccchHHHHHHHHHHHHHcCCchhhhhhhhhccC
Confidence 3333334333333333344457899999999998 6899999999988888999999999999999999999998754
Q ss_pred -ceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccE
Q 003594 527 -LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVA 605 (808)
Q Consensus 527 -~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~ 605 (808)
.+|||||||-.||+.|.++ .+..+|++..+..|+...+.||+|||. ..-||||||..||||+.+|.+
T Consensus 101 sDLWIVMEYCGAGSiSDI~R---------~R~K~L~E~EIs~iL~~TLKGL~YLH~---~~KIHRDIKAGNILLNT~G~A 168 (502)
T KOG0574|consen 101 SDLWIVMEYCGAGSISDIMR---------ARRKPLSEQEISAVLRDTLKGLQYLHD---LKKIHRDIKAGNILLNTDGIA 168 (502)
T ss_pred CceEeehhhcCCCcHHHHHH---------HhcCCccHHHHHHHHHHHHhHHHHHHH---HHHHHhhcccccEEEcccchh
Confidence 8999999999999999996 456889999999999999999999999 558999999999999999999
Q ss_pred EEEeCCCccc-------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhc
Q 003594 606 KISGLGLNIC-------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLD 660 (808)
Q Consensus 606 kl~DfGla~~-------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld 660 (808)
||+|||.|.. -+|+.++||||||++..||.-|+|||....... .+..+-.
T Consensus 169 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMR-----AIFMIPT 243 (502)
T KOG0574|consen 169 KLADFGVAGQLTDTMAKRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMR-----AIFMIPT 243 (502)
T ss_pred hhhhccccchhhhhHHhhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccc-----eeEeccC
Confidence 9999999853 258899999999999999999999997643310 0001111
Q ss_pred --cCCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 661 --GNAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 661 --~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
+....-|...+.++.+++..||.++ |.+|-|+.++++
T Consensus 244 ~PPPTF~KPE~WS~~F~DFi~~CLiK~--PE~R~TA~~L~~ 282 (502)
T KOG0574|consen 244 KPPPTFKKPEEWSSEFNDFIRSCLIKK--PEERKTALRLCE 282 (502)
T ss_pred CCCCCCCChHhhhhHHHHHHHHHhcCC--HHHHHHHHHHhh
Confidence 1122345678899999999999999 889999888774
No 258
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.97 E-value=1.1e-30 Score=281.03 Aligned_cols=227 Identities=22% Similarity=0.270 Sum_probs=176.7
Q ss_pred cccccccccccCCceEEEEEEE--CCeEEEEEEccCCC---CHHHHHHHHHHHhccCCCCccceeecccc----ceEEEE
Q 003594 462 DFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNGL---SEEDFQAKVSFLTAVRHPHLVAVMGCCSE----LKCIVF 532 (808)
Q Consensus 462 ~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~---~~~~~~~Ei~il~~l~HpnIv~l~g~~~~----~~~lV~ 532 (808)
+|... +.+|.|+||.||+|.+ +++.||+|.+.... ....+.+|++++++++||||++++++|.+ ..++||
T Consensus 2 ~~~~~-~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 2 KIVEL-SRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred ceEEE-EEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 34444 4457899999999998 57899999987332 24678999999999999999999998843 579999
Q ss_pred eecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCC
Q 003594 533 EYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 612 (808)
Q Consensus 533 Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGl 612 (808)
||+++++|.+++.... .....+++..+..|+.||+.||.|||+ .+++|+||+|+||+++.++.++|+|||+
T Consensus 81 e~~~~~~L~~~l~~~~------~~~~~l~~~~~~~i~~~i~~~L~~lH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~ 151 (287)
T cd06621 81 EYCEGGSLDSIYKKVK------KRGGRIGEKVLGKIAESVLKGLSYLHS---RKIIHRDIKPSNILLTRKGQVKLCDFGV 151 (287)
T ss_pred EecCCCCHHHHHHHHH------hcCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEEecCCeEEEeeccc
Confidence 9999999999885431 234568999999999999999999999 6699999999999999999999999998
Q ss_pred ccc-----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCC---
Q 003594 613 NIC-----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIW--- 666 (808)
Q Consensus 613 a~~-----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~--- 666 (808)
+.. ..++.++||||||+++|+|++|..||................+........
T Consensus 152 ~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (287)
T cd06621 152 SGELVNSLAGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDE 231 (287)
T ss_pred cccccccccccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccC
Confidence 642 245778999999999999999999987531100011111222222111111
Q ss_pred C---hhhHHHHHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 667 P---LDLAEELAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 667 p---~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
+ ...++.+.+++.+||..+ |..|||+.++++.
T Consensus 232 ~~~~~~~~~~~~~li~~~l~~~--p~~Rpt~~eil~~ 266 (287)
T cd06621 232 PGNGIKWSEEFKDFIKQCLEKD--PTRRPTPWDMLEH 266 (287)
T ss_pred CCCCCchHHHHHHHHHHHcCCC--cccCCCHHHHHhC
Confidence 1 235678999999999999 9999999988863
No 259
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.97 E-value=4.4e-31 Score=293.12 Aligned_cols=222 Identities=17% Similarity=0.213 Sum_probs=169.7
Q ss_pred hccccccccccccCCceEEEEEEE--CCeEEEEEEccCCC----CHHHHHHHHHHHhccCCCCccceeecccc-------
Q 003594 460 TEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNGL----SEEDFQAKVSFLTAVRHPHLVAVMGCCSE------- 526 (808)
Q Consensus 460 t~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~----~~~~~~~Ei~il~~l~HpnIv~l~g~~~~------- 526 (808)
.++|.. .+.+|.|+||.||++.. .+..||||++.... ....+.+|+.+++.++||||+++++++..
T Consensus 16 ~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 16 LKRYQN-LKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhceeE-EEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 345544 35678999999999987 57899999997321 23567889999999999999999998742
Q ss_pred -ceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccE
Q 003594 527 -LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVA 605 (808)
Q Consensus 527 -~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~ 605 (808)
..|+||||++ ++|.+.+. ..+++..+..++.|++.||.|||+ .+|+||||||+|||++.++.+
T Consensus 95 ~~~~lv~e~~~-~~l~~~~~------------~~l~~~~~~~~~~qi~~aL~~LH~---~givHrDikp~Nill~~~~~~ 158 (355)
T cd07874 95 QDVYLVMELMD-ANLCQVIQ------------MELDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTL 158 (355)
T ss_pred ceeEEEhhhhc-ccHHHHHh------------hcCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHHEEECCCCCE
Confidence 4689999997 57777762 247889999999999999999999 569999999999999999999
Q ss_pred EEEeCCCccc------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhc----------
Q 003594 606 KISGLGLNIC------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALD---------- 651 (808)
Q Consensus 606 kl~DfGla~~------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~---------- 651 (808)
||+|||+++. ..++.++|||||||++|+|++|+.||..........
T Consensus 159 kl~Dfg~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~ 238 (355)
T cd07874 159 KILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPC 238 (355)
T ss_pred EEeeCcccccCCCccccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence 9999999853 236789999999999999999999986422100000
Q ss_pred -------HHHHHHHhccC-------------------CCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 652 -------QTTLMQVLDGN-------------------AGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 652 -------~~~~~~~ld~~-------------------~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
.......+... ....+...+..+.+|+.+||..| |..|||+.++++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~d--P~~Rps~~ell~h 311 (355)
T cd07874 239 PEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVID--PAKRISVDEALQH 311 (355)
T ss_pred HHHHHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCC--chhcCCHHHHhcC
Confidence 00011111100 00111224567899999999999 9999999998864
No 260
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-30 Score=289.03 Aligned_cols=217 Identities=24% Similarity=0.327 Sum_probs=183.3
Q ss_pred ccccccccccccCCceEEEEEEE--CCeEEEEEEccCC-----CCHHHHHHHHHHHhccC-CCCccceeecccc--ceEE
Q 003594 461 EDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNG-----LSEEDFQAKVSFLTAVR-HPHLVAVMGCCSE--LKCI 530 (808)
Q Consensus 461 ~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-----~~~~~~~~Ei~il~~l~-HpnIv~l~g~~~~--~~~l 530 (808)
..+++..+++|.|.||.||++.. +|+.+|+|++... .+...+.+|+.+|+++. |||||.++++|.+ ..++
T Consensus 34 ~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~l 113 (382)
T KOG0032|consen 34 KEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVYL 113 (382)
T ss_pred cccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEEE
Confidence 34555557789999999999998 5899999999722 23468999999999998 9999999999976 7899
Q ss_pred EEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCC----CccEE
Q 003594 531 VFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDR----NLVAK 606 (808)
Q Consensus 531 V~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~----~~~~k 606 (808)
|||++.||.|.+.+.. . .+++..+..++.||+.|+.|||+ .+|+||||||+|+|+.. ++.+|
T Consensus 114 vmEL~~GGeLfd~i~~----------~-~~sE~da~~~~~~il~av~~lH~---~gvvHrDlKpEN~L~~~~~~~~~~ik 179 (382)
T KOG0032|consen 114 VMELCEGGELFDRIVK----------K-HYSERDAAGIIRQILEAVKYLHS---LGVVHRDLKPENLLLASKDEGSGRIK 179 (382)
T ss_pred EEEecCCchHHHHHHH----------c-cCCHHHHHHHHHHHHHHHHHHHh---CCceeccCCHHHeeeccccCCCCcEE
Confidence 9999999999999942 2 39999999999999999999999 66999999999999953 35899
Q ss_pred EEeCCCccc------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhcc-
Q 003594 607 ISGLGLNIC------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDG- 661 (808)
Q Consensus 607 l~DfGla~~------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~- 661 (808)
++|||++.. ..|+..+||||+||++|.|++|.+||.... ....+..++.+
T Consensus 180 ~~DFGla~~~~~~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~-----~~~~~~~i~~~~ 254 (382)
T KOG0032|consen 180 LIDFGLAKFIKPGERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGET-----EFEIFLAILRGD 254 (382)
T ss_pred EeeCCCceEccCCceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCC-----hhHHHHHHHcCC
Confidence 999999854 368899999999999999999999997542 22333345444
Q ss_pred ---CCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 662 ---NAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 662 ---~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
..+.|+ .++..+.++|..|+..| |+.|+++.++++
T Consensus 255 ~~f~~~~w~-~is~~akd~i~~ll~~d--p~~R~ta~~~L~ 292 (382)
T KOG0032|consen 255 FDFTSEPWD-DISESAKDFIRKLLEFD--PRKRLTAAQALQ 292 (382)
T ss_pred CCCCCCCcc-ccCHHHHHHHHHhcccC--cccCCCHHHHhc
Confidence 333444 67999999999999999 899999999988
No 261
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.97 E-value=9.5e-31 Score=277.89 Aligned_cols=224 Identities=20% Similarity=0.307 Sum_probs=179.0
Q ss_pred hhccccccccccccCCceEEEEEEE--CCeEEEEEEccC-CCCHHHHHHHHHHHhcc-CCCCccceeecccc--------
Q 003594 459 ATEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN-GLSEEDFQAKVSFLTAV-RHPHLVAVMGCCSE-------- 526 (808)
Q Consensus 459 at~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~-~~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~-------- 526 (808)
++++|.-. +.+|.|+||.||+|.. ++..|++|++.. ....+.+.+|+.+++++ +||||++++++|.+
T Consensus 4 ~~~~y~~~-~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (275)
T cd06608 4 PTGIFELV-EVIGEGTYGKVYKARHKKTGQLVAIKIMDIIEDEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD 82 (275)
T ss_pred chhheehe-eeecCCCCeEEEEEEECCCCcEEEEEEEecCchhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence 45666554 5567899999999998 568999999873 33457799999999999 79999999999843
Q ss_pred ceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEE
Q 003594 527 LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAK 606 (808)
Q Consensus 527 ~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~k 606 (808)
..++||||+++++|.+++.... .....+++..+..++.|++.||.|||+ .+++||||+|+||+++.++.+|
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~------~~~~~~~~~~~~~~~~ql~~al~~lH~---~~i~H~~l~p~ni~~~~~~~~~ 153 (275)
T cd06608 83 QLWLVMELCGGGSVTDLVKGLR------KKGKRLKEEWIAYILRETLRGLAYLHE---NKVIHRDIKGQNILLTKNAEVK 153 (275)
T ss_pred EEEEEEEcCCCCcHHHHHHHHh------hcCCCCCHHHHHHHHHHHHHHHHHHhc---CCcccCCCCHHHEEEccCCeEE
Confidence 3689999999999999985431 124678999999999999999999999 5699999999999999999999
Q ss_pred EEeCCCccc------------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHH
Q 003594 607 ISGLGLNIC------------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLM 656 (808)
Q Consensus 607 l~DfGla~~------------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~ 656 (808)
|+|||++.. ..++.++|||||||+||+|++|++||..... .....
T Consensus 154 l~d~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~ 228 (275)
T cd06608 154 LVDFGVSAQLDSTLGRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHP-----MRALF 228 (275)
T ss_pred ECCCccceecccchhhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccch-----HHHHH
Confidence 999998632 1245679999999999999999999964321 12222
Q ss_pred HHhccCC--CCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 657 QVLDGNA--GIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 657 ~~ld~~~--~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
.+..... ...+...+..+.+|+.+||..| |..|||+.+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d--p~~Rpt~~~ll~ 271 (275)
T cd06608 229 KIPRNPPPTLKSPENWSKKFNDFISECLIKN--YEQRPFMEELLE 271 (275)
T ss_pred HhhccCCCCCCchhhcCHHHHHHHHHHhhcC--hhhCcCHHHHhc
Confidence 2332211 1223346789999999999999 999999999875
No 262
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.97 E-value=1.2e-30 Score=281.01 Aligned_cols=205 Identities=24% Similarity=0.304 Sum_probs=170.9
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccCC-----CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNNG-----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPN 537 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~ 537 (808)
...+|.|+||.||++.+ +++.||+|++... ...+.+.+|+.++++++||||+++++++.+ ..++||||+++
T Consensus 6 ~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~ 85 (290)
T cd05580 6 IKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVMEYVPG 85 (290)
T ss_pred EEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEEecCCC
Confidence 35678899999999998 5799999998621 224668899999999999999999999865 78999999999
Q ss_pred CCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--
Q 003594 538 GNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-- 615 (808)
Q Consensus 538 gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-- 615 (808)
|+|.+++. ....+++..+..++.||+.||.|||+ .+|+||||+|+|||++.++.+||+|||++..
T Consensus 86 ~~L~~~~~----------~~~~l~~~~~~~~~~qil~~l~~lH~---~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~ 152 (290)
T cd05580 86 GELFSHLR----------KSGRFPEPVARFYAAQVVLALEYLHS---LDIVYRDLKPENLLLDSDGYIKITDFGFAKRVK 152 (290)
T ss_pred CCHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEECCCCCEEEeeCCCccccC
Confidence 99999994 34678999999999999999999999 6699999999999999999999999998753
Q ss_pred --------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHHHH
Q 003594 616 --------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELA 675 (808)
Q Consensus 616 --------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~ 675 (808)
...+.++||||||+++|+|++|..||..... ......+. ......|...+..+.
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~l~ 226 (290)
T cd05580 153 GRTYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP-----IQIYEKIL-EGKVRFPSFFSPDAK 226 (290)
T ss_pred CCCCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHh-cCCccCCccCCHHHH
Confidence 2346789999999999999999999865321 11222222 223445666789999
Q ss_pred HHHHHhhccCCCcCccc
Q 003594 676 GIALKCLSADQDANRDL 692 (808)
Q Consensus 676 ~Li~~Cl~~dp~p~~Rp 692 (808)
+++.+||..| |..|+
T Consensus 227 ~li~~~l~~~--p~~R~ 241 (290)
T cd05580 227 DLIRNLLQVD--LTKRL 241 (290)
T ss_pred HHHHHHccCC--HHHcc
Confidence 9999999999 88998
No 263
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.97 E-value=1e-30 Score=279.12 Aligned_cols=212 Identities=21% Similarity=0.334 Sum_probs=172.8
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccCC---CCHHHHHHHHHHHhccC---CCCccceeecccc--ceEEEEeecC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNNG---LSEEDFQAKVSFLTAVR---HPHLVAVMGCCSE--LKCIVFEYMP 536 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~---~~~~~~~~Ei~il~~l~---HpnIv~l~g~~~~--~~~lV~Ey~~ 536 (808)
.+.+|.|+||.||+|.+ ++..||+|.+... .....+.+|+.++++++ |||+++++++|.+ ..++||||++
T Consensus 6 ~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06917 6 LELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIMEYAE 85 (277)
T ss_pred hhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEEecCC
Confidence 45678999999999998 6799999998732 23467889999999997 9999999999865 6799999999
Q ss_pred CCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-
Q 003594 537 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC- 615 (808)
Q Consensus 537 ~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~- 615 (808)
+++|.+++. . ..+++...+.++.|++.||.|||+ .+|+||||+|+||+++.++.++|+|||++..
T Consensus 86 ~~~L~~~~~----------~-~~l~~~~~~~i~~~i~~~l~~lh~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~ 151 (277)
T cd06917 86 GGSVRTLMK----------A-GPIAEKYISVIIREVLVALKYIHK---VGVIHRDIKAANILVTNTGNVKLCDFGVAALL 151 (277)
T ss_pred CCcHHHHHH----------c-cCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCcCHHHEEEcCCCCEEEccCCceeec
Confidence 999999983 2 368999999999999999999999 6699999999999999999999999997742
Q ss_pred -------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCCh-h
Q 003594 616 -------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPL-D 669 (808)
Q Consensus 616 -------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~-~ 669 (808)
..++.++|||||||++|+|++|.+||...... .....+.....+.++. .
T Consensus 152 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~ 226 (277)
T cd06917 152 NQNSSKRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF-----RAMMLIPKSKPPRLEDNG 226 (277)
T ss_pred CCCccccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh-----hhhhccccCCCCCCCccc
Confidence 12467899999999999999999999653221 1111111111222333 2
Q ss_pred hHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 670 LAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 670 ~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
.+.++.+++.+||..| |..||++.+++.
T Consensus 227 ~~~~~~~~i~~~l~~~--p~~R~~~~~il~ 254 (277)
T cd06917 227 YSKLLREFVAACLDEE--PKERLSAEELLK 254 (277)
T ss_pred CCHHHHHHHHHHcCCC--cccCcCHHHHhh
Confidence 6789999999999999 999999999976
No 264
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.97 E-value=8.4e-31 Score=312.25 Aligned_cols=231 Identities=21% Similarity=0.256 Sum_probs=178.2
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccCCC-----CHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNNGL-----SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPN 537 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~-----~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~ 537 (808)
.+.+|+|+||.||+|.+ +|+.||||++.... ..+.|.+|+.++++++||||+++++++.+ ..++||||++|
T Consensus 7 i~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVMEY~eG 86 (932)
T PRK13184 7 IRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTMPYIEG 86 (932)
T ss_pred EEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEEEcCCC
Confidence 35678999999999998 57899999997321 13578999999999999999999999865 78999999999
Q ss_pred CCHHHHHhhccccc-cccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-
Q 003594 538 GNLRDKLFTSQRNY-KNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC- 615 (808)
Q Consensus 538 gsL~~~l~~~~~~~-~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~- 615 (808)
|+|.+++....... ........+++..++.|+.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 87 GSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs---~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i 163 (932)
T PRK13184 87 YTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHS---KGVLHRDLKPDNILLGLFGEVVILDWGAAIFK 163 (932)
T ss_pred CCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHH---CCccccCCchheEEEcCCCCEEEEecCcceec
Confidence 99999996431110 000123457788899999999999999999 6699999999999999999999999998742
Q ss_pred ------------------------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHH
Q 003594 616 ------------------------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQT 653 (808)
Q Consensus 616 ------------------------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~ 653 (808)
..++.++|||||||++|||+||++||...... ..
T Consensus 164 ~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~----ki 239 (932)
T PRK13184 164 KLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGR----KI 239 (932)
T ss_pred ccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchh----hh
Confidence 12567899999999999999999999652211 00
Q ss_pred HH-HHHhccCCCCCChhhHHHHHHHHHHhhccCCCcCccc-cHHhhHHHHHHHHH
Q 003594 654 TL-MQVLDGNAGIWPLDLAEELAGIALKCLSADQDANRDL-RIAGVMKELDEVRK 706 (808)
Q Consensus 654 ~~-~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rp-s~~evl~~L~~l~~ 706 (808)
.. ..+..+........++..+.+++.+||..| |..|| ++.+++..|+.+..
T Consensus 240 ~~~~~i~~P~~~~p~~~iP~~L~~LI~rcL~~D--P~kR~ss~eeLl~~Le~~lq 292 (932)
T PRK13184 240 SYRDVILSPIEVAPYREIPPFLSQIAMKALAVD--PAERYSSVQELKQDLEPHLQ 292 (932)
T ss_pred hhhhhccChhhccccccCCHHHHHHHHHHccCC--hhhCcCHHHHHHHHHHHHHh
Confidence 11 111111111112356788999999999999 88996 57778788877754
No 265
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.97 E-value=9e-31 Score=280.78 Aligned_cols=213 Identities=23% Similarity=0.288 Sum_probs=167.1
Q ss_pred ccccCCceEEEEEEE--CCeEEEEEEccCCC-----CHHHHHHHHHHHh---ccCCCCccceeecccc--ceEEEEeecC
Q 003594 469 LKCAGDWTNVYRGRL--NHASVAIKTLNNGL-----SEEDFQAKVSFLT---AVRHPHLVAVMGCCSE--LKCIVFEYMP 536 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~-----~~~~~~~Ei~il~---~l~HpnIv~l~g~~~~--~~~lV~Ey~~ 536 (808)
++|+|+||.||++.. +++.||+|.+.... ....+.+|..++. ..+||||+.+++++.. ..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 368999999999998 57899999986321 1233445554443 3479999999998854 7899999999
Q ss_pred CCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-
Q 003594 537 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC- 615 (808)
Q Consensus 537 ~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~- 615 (808)
+|+|.+++. ....+++..+..|+.|++.||.|||+ .+|+||||||+|||++.++.++|+|||++..
T Consensus 81 ~~~L~~~i~----------~~~~l~~~~~~~i~~qi~~al~~lH~---~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~ 147 (279)
T cd05633 81 GGDLHYHLS----------QHGVFSEKEMRFYATEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDF 147 (279)
T ss_pred CCCHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHH---CCcCCCCCCHHHEEECCCCCEEEccCCcceec
Confidence 999999984 34569999999999999999999999 5699999999999999999999999998732
Q ss_pred -----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHH
Q 003594 616 -----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAE 672 (808)
Q Consensus 616 -----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~ 672 (808)
..++.++|||||||++|+|++|..||..... .................|...+.
T Consensus 148 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 224 (279)
T cd05633 148 SKKKPHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKT---KDKHEIDRMTLTVNVELPDSFSP 224 (279)
T ss_pred cccCccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCC---cCHHHHHHHhhcCCcCCccccCH
Confidence 1257789999999999999999999964321 11112222222233445667889
Q ss_pred HHHHHHHHhhccCCCcCccc-----cHHhhHH
Q 003594 673 ELAGIALKCLSADQDANRDL-----RIAGVMK 699 (808)
Q Consensus 673 ~l~~Li~~Cl~~dp~p~~Rp-----s~~evl~ 699 (808)
++.+++.+||..| |.+|| ++.++++
T Consensus 225 ~~~~li~~~l~~~--p~~R~~~~~~~~~~~~~ 254 (279)
T cd05633 225 ELKSLLEGLLQRD--VSKRLGCLGRGAQEVKE 254 (279)
T ss_pred HHHHHHHHHhcCC--HHHhcCCCCCCHHHHHh
Confidence 9999999999999 99999 4766654
No 266
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.97 E-value=9.6e-31 Score=277.01 Aligned_cols=219 Identities=21% Similarity=0.251 Sum_probs=177.5
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCCC---CHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCH
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNGL---SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNL 540 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~---~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL 540 (808)
+.+|.|+||.||++.+ ++..||+|.+.... ....+.+|+.++++++||||++++++|.. ..++|+||+++++|
T Consensus 7 ~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 86 (265)
T cd06605 7 GELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEYMDGGSL 86 (265)
T ss_pred HHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEecCCCcH
Confidence 4567899999999999 47899999987432 23578999999999999999999998855 78999999999999
Q ss_pred HHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-----
Q 003594 541 RDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC----- 615 (808)
Q Consensus 541 ~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~----- 615 (808)
.+++... ...+++.....++.|++.||.|||+. .+++|+||||+||+++.++.++|+|||.+..
T Consensus 87 ~~~~~~~---------~~~~~~~~~~~~~~~l~~~l~~lH~~--~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~ 155 (265)
T cd06605 87 DKILKEV---------QGRIPERILGKIAVAVLKGLTYLHEK--HKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSL 155 (265)
T ss_pred HHHHHHc---------cCCCCHHHHHHHHHHHHHHHHHHcCC--CCeecCCCCHHHEEECCCCCEEEeecccchhhHHHH
Confidence 9999532 26789999999999999999999991 3499999999999999999999999998742
Q ss_pred ------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChh-hHHHHHH
Q 003594 616 ------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLD-LAEELAG 676 (808)
Q Consensus 616 ------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~-~~~~l~~ 676 (808)
..++.++||||||+++|+|++|..||.............+..++.......+.. ++..+.+
T Consensus 156 ~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (265)
T cd06605 156 AKTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPPRLPSGKFSPDFQD 235 (265)
T ss_pred hhcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCCCCChhhcCHHHHH
Confidence 246778999999999999999999986532100011122333444444444444 7888999
Q ss_pred HHHHhhccCCCcCccccHHhhHH
Q 003594 677 IALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 677 Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
+|.+||..+ |..||++.+++.
T Consensus 236 li~~~l~~~--p~~Rpt~~~ll~ 256 (265)
T cd06605 236 FVNLCLIKD--PRERPSYKELLE 256 (265)
T ss_pred HHHHHcCCC--chhCcCHHHHhh
Confidence 999999999 999999999874
No 267
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=99.97 E-value=1.6e-30 Score=273.59 Aligned_cols=215 Identities=23% Similarity=0.330 Sum_probs=176.4
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccCC----CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNNG----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNG 538 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~g 538 (808)
...+|.|+||.||++.. ++..||||.+... .....+.+|+.++++++||||+++++.+.+ ..++||||++++
T Consensus 5 ~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 84 (256)
T cd08220 5 IRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEYAPGG 84 (256)
T ss_pred EEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEecCCCC
Confidence 35678999999999988 5789999998732 224578899999999999999999998754 689999999999
Q ss_pred CHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCC-ccEEEEeCCCccc--
Q 003594 539 NLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRN-LVAKISGLGLNIC-- 615 (808)
Q Consensus 539 sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~-~~~kl~DfGla~~-- 615 (808)
+|.+++... ....+++..+..++.+++.||.|||+ .+|+||||+|+||+++.+ +.+||+|||++..
T Consensus 85 ~L~~~~~~~--------~~~~~~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~ 153 (256)
T cd08220 85 TLAEYIQKR--------CNSLLDEDTILHFFVQILLALHHVHT---KLILHRDLKTQNILLDKHKMVVKIGDFGISKILS 153 (256)
T ss_pred CHHHHHHHh--------cccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEccCCCceecC
Confidence 999999542 23458999999999999999999999 569999999999999854 5789999998752
Q ss_pred ----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHH
Q 003594 616 ----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEE 673 (808)
Q Consensus 616 ----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~ 673 (808)
..++.++||||||+++|+|++|..||..... ......+........+...+..
T Consensus 154 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 228 (256)
T cd08220 154 SKSKAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANL-----PALVLKIMSGTFAPISDRYSPD 228 (256)
T ss_pred CCccccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCch-----HHHHHHHHhcCCCCCCCCcCHH
Confidence 2246789999999999999999999865321 1223333333344556667889
Q ss_pred HHHHHHHhhccCCCcCccccHHhhHH
Q 003594 674 LAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 674 l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
+.+++.+||..+ |..||++.+++.
T Consensus 229 l~~li~~~l~~~--p~~Rpt~~~ll~ 252 (256)
T cd08220 229 LRQLILSMLNLD--PSKRPQLSQIMA 252 (256)
T ss_pred HHHHHHHHccCC--hhhCCCHHHHhh
Confidence 999999999999 999999999875
No 268
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.97 E-value=9.5e-31 Score=283.29 Aligned_cols=211 Identities=17% Similarity=0.209 Sum_probs=172.0
Q ss_pred ccccCCceEEEEEEE--CCeEEEEEEcc--CCCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCHHH
Q 003594 469 LKCAGDWTNVYRGRL--NHASVAIKTLN--NGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNLRD 542 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~--~~~~vAiK~l~--~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL~~ 542 (808)
.+|.|+||.||++.. ++..||||.+. .....+.+.+|+.++..++||||++++++|.. ..++||||+++++|..
T Consensus 28 ~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L~~ 107 (297)
T cd06659 28 KIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGALTD 107 (297)
T ss_pred hcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCHHH
Confidence 457899999999987 58999999987 23345678899999999999999999998854 7899999999999999
Q ss_pred HHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-------
Q 003594 543 KLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC------- 615 (808)
Q Consensus 543 ~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~------- 615 (808)
++. ...+++..++.++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||++..
T Consensus 108 ~~~-----------~~~~~~~~~~~~~~qi~~~L~~LH~---~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~ 173 (297)
T cd06659 108 IVS-----------QTRLNEEQIATVCESVLQALCYLHS---QGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPK 173 (297)
T ss_pred HHh-----------hcCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHeEEccCCcEEEeechhHhhccccccc
Confidence 873 2458999999999999999999999 5699999999999999999999999998732
Q ss_pred ------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhcc--CCCCCChhhHHHHH
Q 003594 616 ------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDG--NAGIWPLDLAEELA 675 (808)
Q Consensus 616 ------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~--~~~~~p~~~~~~l~ 675 (808)
..++.++|||||||++|+|++|++||..... ...+..+... .....+...+..+.
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~ 248 (297)
T cd06659 174 RKSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSP-----VQAMKRLRDSPPPKLKNAHKISPVLR 248 (297)
T ss_pred ccceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHhccCCCCccccCCCCHHHH
Confidence 2357889999999999999999999864221 1111111111 11112235677899
Q ss_pred HHHHHhhccCCCcCccccHHhhHHH
Q 003594 676 GIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 676 ~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
+++.+||+.+ |..||++.+++..
T Consensus 249 ~~i~~~l~~~--P~~Rps~~~ll~~ 271 (297)
T cd06659 249 DFLERMLTRE--PQERATAQELLDH 271 (297)
T ss_pred HHHHHHhcCC--cccCcCHHHHhhC
Confidence 9999999999 9999999998874
No 269
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=99.97 E-value=1e-30 Score=279.59 Aligned_cols=212 Identities=22% Similarity=0.297 Sum_probs=170.8
Q ss_pred cccCCceEEEEEEE--CCeEEEEEEccC-----CCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCH
Q 003594 470 KCAGDWTNVYRGRL--NHASVAIKTLNN-----GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNL 540 (808)
Q Consensus 470 ~g~G~~g~Vy~~~~--~~~~vAiK~l~~-----~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL 540 (808)
+|.|+||.||++.. +|+.||+|.+.. ......+..|+.+|++++||||+++++++.. ..|+||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 47899999999987 588999999862 1223467789999999999999999998854 78999999999999
Q ss_pred HHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-----
Q 003594 541 RDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC----- 615 (808)
Q Consensus 541 ~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~----- 615 (808)
.+++... ....+++..+..++.|++.||.|||+ .+++||||+|+|||++.++.+||+|||++..
T Consensus 81 ~~~l~~~--------~~~~~~~~~~~~~~~ql~~~l~~lH~---~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 149 (277)
T cd05577 81 KYHIYNV--------GEPGFPEARAIFYAAQIICGLEHLHQ---RRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK 149 (277)
T ss_pred HHHHHHc--------CcCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEECCCCCEEEccCcchhhhccCC
Confidence 9999643 22468999999999999999999999 5699999999999999999999999998742
Q ss_pred -------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHHHHH
Q 003594 616 -------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAG 676 (808)
Q Consensus 616 -------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~ 676 (808)
..++.++||||||+++|+|++|+.||...... .....+...........+...+..+.+
T Consensus 150 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (277)
T cd05577 150 KIKGRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEK--VEKEELKRRTLEMAVEYPDKFSPEAKD 227 (277)
T ss_pred ccccccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccc--ccHHHHHhccccccccCCccCCHHHHH
Confidence 23567899999999999999999998653221 111122222222333455567889999
Q ss_pred HHHHhhccCCCcCccccHHh
Q 003594 677 IALKCLSADQDANRDLRIAG 696 (808)
Q Consensus 677 Li~~Cl~~dp~p~~Rps~~e 696 (808)
++.+||+.+ |..||++.+
T Consensus 228 li~~~l~~~--p~~R~~~~~ 245 (277)
T cd05577 228 LCEALLQKD--PEKRLGCRG 245 (277)
T ss_pred HHHHHccCC--hhHccCCCc
Confidence 999999999 999995444
No 270
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.97 E-value=1.3e-30 Score=277.42 Aligned_cols=212 Identities=20% Similarity=0.319 Sum_probs=171.4
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCC-----C-------CHHHHHHHHHHHhccCCCCccceeecccc--ceEEE
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNG-----L-------SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIV 531 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-----~-------~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV 531 (808)
+.+|.|+||.||+|.. +|..||+|.+... . ..+.+..|+.+++.++||||+++++++.. ..++|
T Consensus 7 ~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 86 (272)
T cd06629 7 ELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEEYLSIF 86 (272)
T ss_pred ceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCCceEEE
Confidence 4678999999999987 6789999987621 1 01357889999999999999999999865 78999
Q ss_pred EeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCC
Q 003594 532 FEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLG 611 (808)
Q Consensus 532 ~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfG 611 (808)
|||+++|+|.+++. ....+++..+..|+.||+.||.|||+ .+++||||+|+||+++.++.++|+|||
T Consensus 87 ~e~~~~~~L~~~l~----------~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~~~nil~~~~~~~~l~d~~ 153 (272)
T cd06629 87 LEYVPGGSIGSCLR----------TYGRFEEQLVRFFTEQVLEGLAYLHS---KGILHRDLKADNLLVDADGICKISDFG 153 (272)
T ss_pred EecCCCCcHHHHHh----------hccCCCHHHHHHHHHHHHHHHHHHhh---CCeeecCCChhhEEEcCCCeEEEeecc
Confidence 99999999999994 33578999999999999999999999 569999999999999999999999999
Q ss_pred Cccc---------------------------C--CCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHh-cc
Q 003594 612 LNIC---------------------------D--QLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVL-DG 661 (808)
Q Consensus 612 la~~---------------------------~--~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~l-d~ 661 (808)
++.. . .++.++|+||||+++|+|++|..||...... ..+..+. ..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~-----~~~~~~~~~~ 228 (272)
T cd06629 154 ISKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAI-----AAMFKLGNKR 228 (272)
T ss_pred ccccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchH-----HHHHHhhccc
Confidence 8742 1 2577899999999999999999998642211 1111111 11
Q ss_pred CCCCCC----hhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 662 NAGIWP----LDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 662 ~~~~~p----~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
....++ ..++..+.+++.+||..+ |..||++.+|+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~li~~~l~~~--p~~Rps~~~il~ 268 (272)
T cd06629 229 SAPPIPPDVSMNLSPVALDFLNACFTIN--PDNRPTARELLQ 268 (272)
T ss_pred cCCcCCccccccCCHHHHHHHHHHhcCC--hhhCCCHHHHhh
Confidence 122222 245789999999999999 999999999875
No 271
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.97 E-value=1.1e-30 Score=279.83 Aligned_cols=218 Identities=21% Similarity=0.264 Sum_probs=170.2
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccCCC----CHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNNGL----SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNG 538 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~----~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~g 538 (808)
.+.+|.|+||.||+|.+ ++..||+|++.... ..+.+.+|+++++.++||||++++++|.+ ..++||||++++
T Consensus 6 ~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 85 (286)
T cd07846 6 LGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFEFVDHT 85 (286)
T ss_pred eeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEecCCcc
Confidence 35678999999999998 47899999986221 24578899999999999999999999965 789999999999
Q ss_pred CHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc---
Q 003594 539 NLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC--- 615 (808)
Q Consensus 539 sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~--- 615 (808)
+|..+.. ....++|..+..++.||+.||.|||+ .+|+||||+|+||+++.++.++|+|||++..
T Consensus 86 ~l~~~~~----------~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~ 152 (286)
T cd07846 86 VLDDLEK----------YPNGLDESRVRKYLFQILRGIEFCHS---HNIIHRDIKPENILVSQSGVVKLCDFGFARTLAA 152 (286)
T ss_pred HHHHHHh----------ccCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEECCCCcEEEEeeeeeeeccC
Confidence 9888773 33458999999999999999999999 5699999999999999999999999998642
Q ss_pred -----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhc---------HHHHHHHh----
Q 003594 616 -----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALD---------QTTLMQVL---- 659 (808)
Q Consensus 616 -----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~---------~~~~~~~l---- 659 (808)
..++.++||||||+++|+|++|++||.......... ........
T Consensus 153 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (286)
T cd07846 153 PGEVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKNP 232 (286)
T ss_pred CccccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccch
Confidence 124578999999999999999999985321100000 00000000
Q ss_pred --ccC-CC---------CCChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 660 --DGN-AG---------IWPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 660 --d~~-~~---------~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
.+. .+ ..+..++..+.+|+.+||..+ |..||++.+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~--P~~Rp~~~~il~ 282 (286)
T cd07846 233 LFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRID--PDDRPSSSQLLH 282 (286)
T ss_pred HhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCC--cccchhHHHHhc
Confidence 000 00 012245788999999999999 999999998875
No 272
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=99.97 E-value=1.5e-30 Score=279.92 Aligned_cols=218 Identities=21% Similarity=0.289 Sum_probs=167.3
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccCC---CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNNG---LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGN 539 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~---~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gs 539 (808)
.+.+|.|+||.||+|.. +++.||||.+... .....+.+|+.++++++||||+++++++.+ ..++||||++ ++
T Consensus 10 ~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~ 88 (291)
T cd07844 10 LDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEYLD-TD 88 (291)
T ss_pred EEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEecCC-CC
Confidence 35668899999999998 5789999998722 223467789999999999999999999865 7899999998 59
Q ss_pred HHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc----
Q 003594 540 LRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC---- 615 (808)
Q Consensus 540 L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~---- 615 (808)
|.+++... ...+++.....++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 89 L~~~~~~~---------~~~~~~~~~~~~~~ql~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~ 156 (291)
T cd07844 89 LKQYMDDC---------GGGLSMHNVRLFLFQLLRGLAYCHQ---RRVLHRDLKPQNLLISERGELKLADFGLARAKSVP 156 (291)
T ss_pred HHHHHHhC---------CCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccCCHHHEEEcCCCCEEECccccccccCCC
Confidence 99988532 3468999999999999999999999 5699999999999999999999999998632
Q ss_pred ----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhc-----------HHHHHHHhcc-
Q 003594 616 ----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALD-----------QTTLMQVLDG- 661 (808)
Q Consensus 616 ----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~-----------~~~~~~~ld~- 661 (808)
..++.++||||||+++|+|++|++||.......... ...+..+...
T Consensus 157 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (291)
T cd07844 157 SKTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNP 236 (291)
T ss_pred CccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhcc
Confidence 125678999999999999999999985432100000 0000000000
Q ss_pred -----CCCC---------C-ChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 662 -----NAGI---------W-PLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 662 -----~~~~---------~-p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
.... + .......+.+++.+||+.+ |..||++.+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~--p~~Rps~~e~l~ 287 (291)
T cd07844 237 EFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYE--PKKRISAAEAMK 287 (291)
T ss_pred ccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccC--cccccCHHHHhc
Confidence 0000 0 0111267889999999999 999999998864
No 273
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.97 E-value=1.6e-30 Score=282.27 Aligned_cols=215 Identities=21% Similarity=0.247 Sum_probs=173.1
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCCC-----CHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCC
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNGL-----SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNG 538 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~-----~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~g 538 (808)
+.+|.|+||.||++.. .++.||+|.+.... ....+.+|+.++..++||||+++++.+.. ..++||||++||
T Consensus 7 ~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~g~ 86 (305)
T cd05609 7 KLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVMEYVEGG 86 (305)
T ss_pred eEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEEecCCCC
Confidence 5667899999999998 56899999987321 23568899999999999999999999865 679999999999
Q ss_pred CHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc---
Q 003594 539 NLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC--- 615 (808)
Q Consensus 539 sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~--- 615 (808)
+|.+++. ....+++..+..++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||+++.
T Consensus 87 ~L~~~l~----------~~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~ 153 (305)
T cd05609 87 DCATLLK----------NIGALPVDMARMYFAETVLALEYLHN---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLM 153 (305)
T ss_pred cHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCchHHEEECCCCCEEEeeCCCccccCc
Confidence 9999994 33568999999999999999999999 5699999999999999999999999998641
Q ss_pred -------------------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHH
Q 003594 616 -------------------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQV 658 (808)
Q Consensus 616 -------------------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ 658 (808)
..++.++|||||||++|+|++|..||..... ...+...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~-----~~~~~~~ 228 (305)
T cd05609 154 SLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP-----EELFGQV 228 (305)
T ss_pred CccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHH
Confidence 2356789999999999999999999864211 1112222
Q ss_pred hccC--CCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHH
Q 003594 659 LDGN--AGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELD 702 (808)
Q Consensus 659 ld~~--~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~ 702 (808)
.... .+..+..++..+.+++.+||+.+ |..||++..+.+.|+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~li~~~l~~~--P~~R~~~~~~~~ll~ 272 (305)
T cd05609 229 ISDDIEWPEGDEALPADAQDLISRLLRQN--PLERLGTGGAFEVKQ 272 (305)
T ss_pred HhcccCCCCccccCCHHHHHHHHHHhccC--hhhccCccCHHHHHh
Confidence 2211 11112256788999999999999 999999766665554
No 274
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.97 E-value=9e-31 Score=280.54 Aligned_cols=217 Identities=16% Similarity=0.210 Sum_probs=167.9
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCC----CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCC
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNG----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGN 539 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gs 539 (808)
+.+|.|+||.||+|.+ +|..||+|.+... .....+.+|+.++++++||||+++++++.+ ..++|+||++ ++
T Consensus 6 ~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~ 84 (284)
T cd07839 6 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEYCD-QD 84 (284)
T ss_pred EEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEecCC-CC
Confidence 4568999999999998 6889999998722 223567889999999999999999999965 7899999997 68
Q ss_pred HHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc----
Q 003594 540 LRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC---- 615 (808)
Q Consensus 540 L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~---- 615 (808)
|.+++.. ....+++..+..++.||+.||.|||+ .+|+||||||+||+++.++.+||+|||++..
T Consensus 85 l~~~~~~---------~~~~~~~~~~~~~~~qi~~al~~LH~---~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 152 (284)
T cd07839 85 LKKYFDS---------CNGDIDPEIVKSFMFQLLKGLAFCHS---HNVLHRDLKPQNLLINKNGELKLADFGLARAFGIP 152 (284)
T ss_pred HHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHH---CCEecCCCCHHHEEEcCCCcEEECccchhhccCCC
Confidence 8888742 23568999999999999999999999 6699999999999999999999999998742
Q ss_pred ----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHh-hh----------cHHHH---HHHh
Q 003594 616 ----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAM-AL----------DQTTL---MQVL 659 (808)
Q Consensus 616 ----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~-~~----------~~~~~---~~~l 659 (808)
..++.++|||||||++|+|+||..|+....... .. ....+ ....
T Consensus 153 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (284)
T cd07839 153 VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLP 232 (284)
T ss_pred CCCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhcc
Confidence 125778999999999999999988753211100 00 00000 0000
Q ss_pred cc-CCCC---------CChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 660 DG-NAGI---------WPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 660 d~-~~~~---------~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
+. .... .....+..+.+|+.+||..| |.+|||+.+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~--P~~R~t~~~il~ 280 (284)
T cd07839 233 DYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCN--PVQRISAEEALQ 280 (284)
T ss_pred cccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCC--hhhcCCHHHHhc
Confidence 00 0000 11235678999999999999 999999998875
No 275
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.97 E-value=2.6e-30 Score=274.67 Aligned_cols=220 Identities=22% Similarity=0.322 Sum_probs=174.6
Q ss_pred cccccCCceEEEEEEEC---CeEEEEEEccCC------------CCHHHHHHHHHHHhc-cCCCCccceeecccc--ceE
Q 003594 468 RLKCAGDWTNVYRGRLN---HASVAIKTLNNG------------LSEEDFQAKVSFLTA-VRHPHLVAVMGCCSE--LKC 529 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~~---~~~vAiK~l~~~------------~~~~~~~~Ei~il~~-l~HpnIv~l~g~~~~--~~~ 529 (808)
+.+|.|+||.||+|.+. +..+|+|.+... .....+.+|+.++.+ ++||||++++++|.+ ..+
T Consensus 6 ~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~ 85 (269)
T cd08528 6 EHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLENDRLY 85 (269)
T ss_pred hhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEccCCeEE
Confidence 45688999999999983 478999987611 112457788888875 799999999999865 789
Q ss_pred EEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEe
Q 003594 530 IVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISG 609 (808)
Q Consensus 530 lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~D 609 (808)
+||||++|++|.+++.... .....+++..++.++.|++.||.|||+. .+|+|+||+|+|||++.++.+||+|
T Consensus 86 lv~e~~~~~~l~~~l~~~~------~~~~~~~~~~~~~~~~~l~~~l~~lh~~--~~i~H~dl~~~nil~~~~~~~~l~d 157 (269)
T cd08528 86 IVMDLIEGAPLGEHFNSLK------EKKQRFTEERIWNIFVQMVLALRYLHKE--KRIVHRDLTPNNIMLGEDDKVTITD 157 (269)
T ss_pred EEEecCCCCcHHHHHHHHH------hccCCCCHHHHHHHHHHHHHHHHHhccC--CceeecCCCHHHEEECCCCcEEEec
Confidence 9999999999999985431 2345699999999999999999999963 3699999999999999999999999
Q ss_pred CCCccc------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCC
Q 003594 610 LGLNIC------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGI 665 (808)
Q Consensus 610 fGla~~------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~ 665 (808)
||++.. ..++.++||||||+++|+|++|++||..... ......+......+
T Consensus 158 fg~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~ 232 (269)
T cd08528 158 FGLAKQKQPESKLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNM-----LSLATKIVEAVYEP 232 (269)
T ss_pred ccceeecccccccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCH-----HHHHHHHhhccCCc
Confidence 998742 2356889999999999999999999864321 11122222222222
Q ss_pred CCh-hhHHHHHHHHHHhhccCCCcCccccHHhhHHHHH
Q 003594 666 WPL-DLAEELAGIALKCLSADQDANRDLRIAGVMKELD 702 (808)
Q Consensus 666 ~p~-~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~ 702 (808)
.+. ..+..+.+++.+||+.| |..||++.++..+|.
T Consensus 233 ~~~~~~~~~l~~li~~cl~~~--p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 233 LPEGMYSEDVTDVITSCLTPD--AEARPDIIQVSAMIS 268 (269)
T ss_pred CCcccCCHHHHHHHHHHCCCC--CccCCCHHHHHHHhc
Confidence 222 46789999999999999 999999999998874
No 276
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.5e-31 Score=290.78 Aligned_cols=212 Identities=23% Similarity=0.344 Sum_probs=175.9
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccC-C-CC---HHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNN-G-LS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPN 537 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~-~-~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~ 537 (808)
++-||.|+||.||.+++ +...||||++.. . .+ ..++..||..|.+++|||+|.+-|+|.. ..|||||||-
T Consensus 31 LrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEYCl- 109 (948)
T KOG0577|consen 31 LREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEYCL- 109 (948)
T ss_pred HHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHHHh-
Confidence 45568999999999998 678999999982 1 22 2578899999999999999999999954 7899999995
Q ss_pred CCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--
Q 003594 538 GNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-- 615 (808)
Q Consensus 538 gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-- 615 (808)
||-.|+|.- ...++-+..+..|+.+.+.||+|||++ +.||||||..||||++.|.+||+|||.|..
T Consensus 110 GSAsDlleV---------hkKplqEvEIAAi~~gaL~gLaYLHS~---~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~ 177 (948)
T KOG0577|consen 110 GSASDLLEV---------HKKPLQEVEIAAITHGALQGLAYLHSH---NRIHRDIKAGNILLSEPGLVKLADFGSASIMA 177 (948)
T ss_pred ccHHHHHHH---------HhccchHHHHHHHHHHHHHHHHHHHHh---hHHhhhccccceEecCCCeeeeccccchhhcC
Confidence 788888853 356799999999999999999999995 599999999999999999999999998743
Q ss_pred ----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCC-ChhhHH
Q 003594 616 ----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIW-PLDLAE 672 (808)
Q Consensus 616 ----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~-p~~~~~ 672 (808)
+.|+-++|||||||+..||.-.+||....+. ...+..+.....+.. ..+.+.
T Consensus 178 PAnsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNA-----MSALYHIAQNesPtLqs~eWS~ 252 (948)
T KOG0577|consen 178 PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-----MSALYHIAQNESPTLQSNEWSD 252 (948)
T ss_pred chhcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchH-----HHHHHHHHhcCCCCCCCchhHH
Confidence 6799999999999999999999999765422 223334433322222 346789
Q ss_pred HHHHHHHHhhccCCCcCccccHHhhH
Q 003594 673 ELAGIALKCLSADQDANRDLRIAGVM 698 (808)
Q Consensus 673 ~l~~Li~~Cl~~dp~p~~Rps~~evl 698 (808)
.|.+++..||++- |.+|||..+++
T Consensus 253 ~F~~Fvd~CLqKi--pqeRptse~ll 276 (948)
T KOG0577|consen 253 YFRNFVDSCLQKI--PQERPTSEELL 276 (948)
T ss_pred HHHHHHHHHHhhC--cccCCcHHHHh
Confidence 9999999999999 88999877665
No 277
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.97 E-value=2.3e-30 Score=272.66 Aligned_cols=214 Identities=20% Similarity=0.337 Sum_probs=175.9
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCC----CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCC
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNG----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGN 539 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gs 539 (808)
+.+|.|+||.||+|.+ +|..||+|.+... ...+.+.+|+.+++.++||||+++++++.+ ..++||||+++++
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 85 (257)
T cd08225 6 KKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEYCDGGD 85 (257)
T ss_pred EEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEecCCCCc
Confidence 4567899999999998 5789999998722 334678899999999999999999999865 6899999999999
Q ss_pred HHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCc-cEEEEeCCCccc---
Q 003594 540 LRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNL-VAKISGLGLNIC--- 615 (808)
Q Consensus 540 L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~-~~kl~DfGla~~--- 615 (808)
|.+++... ....+++..+..++.|++.||.|||+ .+|+|+||||+||+++.++ .+||+|||.+..
T Consensus 86 L~~~~~~~--------~~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~ 154 (257)
T cd08225 86 LMKRINRQ--------RGVLFSEDQILSWFVQISLGLKHIHD---RKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLND 154 (257)
T ss_pred HHHHHHhc--------cCCCCCHHHHHHHHHHHHHHHHHHHH---CCcccccCCHHHEEEcCCCCeEEecccccchhccC
Confidence 99999542 23458999999999999999999999 5699999999999998875 579999998742
Q ss_pred ----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHH
Q 003594 616 ----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEE 673 (808)
Q Consensus 616 ----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~ 673 (808)
..++.++||||||+++|+|++|..||..... ...............+...+..
T Consensus 155 ~~~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 229 (257)
T cd08225 155 SMELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNNL-----HQLVLKICQGYFAPISPNFSRD 229 (257)
T ss_pred CcccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCccH-----HHHHHHHhcccCCCCCCCCCHH
Confidence 2356789999999999999999999864321 1222333343334445567789
Q ss_pred HHHHHHHhhccCCCcCccccHHhhHH
Q 003594 674 LAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 674 l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
+.+++.+||..+ |..||++.+++.
T Consensus 230 ~~~~i~~~l~~~--p~~Rpt~~~ll~ 253 (257)
T cd08225 230 LRSLISQLFKVS--PRDRPSITSILK 253 (257)
T ss_pred HHHHHHHHhccC--hhhCcCHHHHhh
Confidence 999999999999 999999999875
No 278
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.97 E-value=3e-30 Score=272.62 Aligned_cols=216 Identities=22% Similarity=0.313 Sum_probs=180.6
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCCC---CHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCH
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNGL---SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNL 540 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~---~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL 540 (808)
+.+|.|+||.||++.. ++..|+||++.... ....+.+|+.++.+++||||+++++++.. ..++||||+++++|
T Consensus 7 ~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 86 (264)
T cd06623 7 KVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEYMDGGSL 86 (264)
T ss_pred eeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEecCCCcH
Confidence 5678899999999998 48999999988443 35789999999999999999999999865 78999999999999
Q ss_pred HHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhh-cCCCCeEecCCCCCCcccCCCccEEEEeCCCccc----
Q 003594 541 RDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHS-TEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC---- 615 (808)
Q Consensus 541 ~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~-~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~---- 615 (808)
.+++. ....+++..++.++.|++.||.|||+ .+ ++||||+|+||+++.++.++|+|||++..
T Consensus 87 ~~~l~----------~~~~l~~~~~~~~~~~l~~~l~~lh~~~~---~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~ 153 (264)
T cd06623 87 ADLLK----------KVGKIPEPVLAYIARQILKGLDYLHTKRH---IIHRDIKPSNLLINSKGEVKIADFGISKVLENT 153 (264)
T ss_pred HHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHhccCC---CccCCCCHHHEEECCCCCEEEccCccceecccC
Confidence 99994 33678999999999999999999998 65 99999999999999999999999998753
Q ss_pred ---------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChh-hHHH
Q 003594 616 ---------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLD-LAEE 673 (808)
Q Consensus 616 ---------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~-~~~~ 673 (808)
..++.++||||||+++|+|+||.+||...... ........+........+.. ++..
T Consensus 154 ~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (264)
T cd06623 154 LDQCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQP--SFFELMQAICDGPPPSLPAEEFSPE 231 (264)
T ss_pred CCcccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCcccccc--CHHHHHHHHhcCCCCCCCcccCCHH
Confidence 23467899999999999999999998654210 11122333344444555556 7899
Q ss_pred HHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 674 LAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 674 l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
+.+++.+||..+ |..||++.++++.
T Consensus 232 l~~li~~~l~~~--p~~R~~~~~ll~~ 256 (264)
T cd06623 232 FRDFISACLQKD--PKKRPSAAELLQH 256 (264)
T ss_pred HHHHHHHHccCC--hhhCCCHHHHHhC
Confidence 999999999999 9999999999863
No 279
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=99.97 E-value=2e-30 Score=275.12 Aligned_cols=215 Identities=19% Similarity=0.342 Sum_probs=175.0
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCCC--------CHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeec
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNGL--------SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYM 535 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~--------~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~ 535 (808)
.++|.|+||.||+|.. ++..||+|++.... ....+.+|+.++++++||||+++++++.+ ..++||||+
T Consensus 6 ~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~v~e~~ 85 (268)
T cd06630 6 QQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNLFVEWM 85 (268)
T ss_pred ceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEEEEecc
Confidence 5678999999999987 67899999987322 13578899999999999999999999965 779999999
Q ss_pred CCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCc-cEEEEeCCCcc
Q 003594 536 PNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNL-VAKISGLGLNI 614 (808)
Q Consensus 536 ~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~-~~kl~DfGla~ 614 (808)
++++|.+++. ...++++..+..++.||+.||.|||+ .+++|+||+|+||+++.++ .+||+|||++.
T Consensus 86 ~~~~L~~~l~----------~~~~~~~~~~~~~~~ql~~al~~LH~---~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~ 152 (268)
T cd06630 86 AGGSVSHLLS----------KYGAFKEAVIINYTEQLLRGLSYLHE---NQIIHRDVKGANLLIDSTGQRLRIADFGAAA 152 (268)
T ss_pred CCCcHHHHHH----------HhCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEEccccccc
Confidence 9999999994 34568999999999999999999999 5699999999999998775 69999999863
Q ss_pred c-----------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHh-ccCCC
Q 003594 615 C-----------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVL-DGNAG 664 (808)
Q Consensus 615 ~-----------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~l-d~~~~ 664 (808)
. ..++.++||||||+++|+|++|..||...... .......... ....+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~ 230 (268)
T cd06630 153 RLAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHS--NHLALIFKIASATTAP 230 (268)
T ss_pred ccccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCc--chHHHHHHHhccCCCC
Confidence 2 23567899999999999999999998642211 0011111111 12345
Q ss_pred CCChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 665 IWPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 665 ~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
..|...+.++.+++.+||..+ |..||++.+++.
T Consensus 231 ~~~~~~~~~~~~~i~~~l~~~--p~~R~~~~~ll~ 263 (268)
T cd06630 231 SIPEHLSPGLRDVTLRCLELQ--PEDRPPSRELLK 263 (268)
T ss_pred CCchhhCHHHHHHHHHHcCCC--cccCcCHHHHhc
Confidence 566678899999999999999 999999998874
No 280
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.97 E-value=1.3e-30 Score=274.81 Aligned_cols=216 Identities=27% Similarity=0.430 Sum_probs=172.4
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccCCCCHH----HHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNNGLSEE----DFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNG 538 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~~~~----~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~g 538 (808)
.+.+|.|+||.||++.. ++..||+|++....... ...+|+.++.+++||||+++++++.+ ..++||||++++
T Consensus 4 ~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~~~~ 83 (260)
T PF00069_consen 4 VKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYCPGG 83 (260)
T ss_dssp EEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEETTE
T ss_pred eEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccccccccccccccccccc
Confidence 45678999999999999 56789999998443322 23459999999999999999999954 788999999999
Q ss_pred CHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc---
Q 003594 539 NLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC--- 615 (808)
Q Consensus 539 sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~--- 615 (808)
+|.+++. ....+++..++.++.||+.||.|||+ .+|+|+||||+||+++.++.++|+|||++..
T Consensus 84 ~L~~~l~----------~~~~~~~~~~~~~~~qi~~~L~~Lh~---~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~ 150 (260)
T PF00069_consen 84 SLQDYLQ----------KNKPLSEEEILKIAYQILEALAYLHS---KGIVHRDIKPENILLDENGEVKLIDFGSSVKLSE 150 (260)
T ss_dssp BHHHHHH----------HHSSBBHHHHHHHHHHHHHHHHHHHH---TTEEESSBSGGGEEESTTSEEEESSGTTTEESTS
T ss_pred ccccccc----------cccccccccccccccccccccccccc---cccccccccccccccccccccccccccccccccc
Confidence 9999994 34678999999999999999999999 5699999999999999999999999999841
Q ss_pred -----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhcc---CCCCCChh
Q 003594 616 -----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDG---NAGIWPLD 669 (808)
Q Consensus 616 -----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~---~~~~~p~~ 669 (808)
..++.++||||||+++|+|++|..||...... ............ ........
T Consensus 151 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 228 (260)
T PF00069_consen 151 NNENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNSD--DQLEIIEKILKRPLPSSSQQSRE 228 (260)
T ss_dssp TTSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSHH--HHHHHHHHHHHTHHHHHTTSHTT
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccch--hhhhhhhhcccccccccccccch
Confidence 24678999999999999999999998764110 011111111111 00111112
Q ss_pred hHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 670 LAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 670 ~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
....+.+++.+||+.| |..||++.++++
T Consensus 229 ~~~~l~~li~~~l~~~--p~~R~~~~~l~~ 256 (260)
T PF00069_consen 229 KSEELRDLIKKMLSKD--PEQRPSAEELLK 256 (260)
T ss_dssp SHHHHHHHHHHHSSSS--GGGSTTHHHHHT
T ss_pred hHHHHHHHHHHHccCC--hhHCcCHHHHhc
Confidence 3489999999999999 999999998874
No 281
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.97 E-value=2e-30 Score=277.51 Aligned_cols=222 Identities=20% Similarity=0.265 Sum_probs=173.2
Q ss_pred cccccccccccCCceEEEEEEE--CCeEEEEEEccCCC---CHHHHHHHHHH-HhccCCCCccceeecccc--ceEEEEe
Q 003594 462 DFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNGL---SEEDFQAKVSF-LTAVRHPHLVAVMGCCSE--LKCIVFE 533 (808)
Q Consensus 462 ~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~---~~~~~~~Ei~i-l~~l~HpnIv~l~g~~~~--~~~lV~E 533 (808)
+|... ..+|.|+||.||++.+ +|..||||.+.... ....+..|+.+ ++.++||||+++++++.. ..++|||
T Consensus 2 ~~~~~-~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 2 DLEVI-EELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CceEE-EEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 34443 4567899999999998 58999999987332 23456667765 566689999999999854 7899999
Q ss_pred ecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCc
Q 003594 534 YMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 613 (808)
Q Consensus 534 y~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla 613 (808)
|++ |+|.+++.... .....+++..++.++.||+.||.|||++ .+++||||||+|||++.++.+||+|||++
T Consensus 81 ~~~-~~l~~~l~~~~------~~~~~~~~~~~~~~~~qi~~~l~~lH~~--~~i~h~dlkp~nil~~~~~~~kl~dfg~~ 151 (283)
T cd06617 81 VMD-TSLDKFYKKVY------DKGLTIPEDILGKIAVSIVKALEYLHSK--LSVIHRDVKPSNVLINRNGQVKLCDFGIS 151 (283)
T ss_pred hhc-ccHHHHHHHhc------cCCCCCCHHHHHHHHHHHHHHHHHHhhc--CCeecCCCCHHHEEECCCCCEEEeecccc
Confidence 996 78988886432 2345799999999999999999999984 16999999999999999999999999987
Q ss_pred cc----------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCC
Q 003594 614 IC----------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGI 665 (808)
Q Consensus 614 ~~----------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~ 665 (808)
.. ..++.++|+|||||++|+|++|+.||..... ....+..........
T Consensus 152 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~~ 227 (283)
T cd06617 152 GYLVDSVAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKT----PFQQLKQVVEEPSPQ 227 (283)
T ss_pred cccccccccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCcccc----CHHHHHHHHhcCCCC
Confidence 42 1246789999999999999999999864211 112223333333333
Q ss_pred CC-hhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 666 WP-LDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 666 ~p-~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
.| ..++.++.+++.+||..+ |..||++.+++.
T Consensus 228 ~~~~~~~~~l~~li~~~l~~~--p~~Rp~~~~il~ 260 (283)
T cd06617 228 LPAEKFSPEFQDFVNKCLKKN--YKERPNYPELLQ 260 (283)
T ss_pred CCccccCHHHHHHHHHHccCC--hhhCcCHHHHhc
Confidence 33 246789999999999999 999999988876
No 282
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.97 E-value=1.5e-30 Score=274.70 Aligned_cols=211 Identities=20% Similarity=0.251 Sum_probs=175.0
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccCC-----CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNNG-----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPN 537 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~ 537 (808)
.+.+|.|+||.||+|.+ ++..||+|.+... ...+.+.+|+.++++++||||+++++++.+ ..++||||+.+
T Consensus 5 ~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 84 (258)
T cd05578 5 LRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVDLLLG 84 (258)
T ss_pred EEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEeCCCC
Confidence 35668899999999998 4799999999722 234678999999999999999999999865 78999999999
Q ss_pred CCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--
Q 003594 538 GNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-- 615 (808)
Q Consensus 538 gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-- 615 (808)
++|.+++. ...++++..+..|+.||+.||.|||+ .+++|+||+|+||+++.++.++|+|||++..
T Consensus 85 ~~L~~~l~----------~~~~l~~~~~~~~~~~i~~~l~~lh~---~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~ 151 (258)
T cd05578 85 GDLRYHLS----------QKVKFSEEQVKFWICEIVLALEYLHS---KGIIHRDIKPDNILLDEQGHVHITDFNIATKVT 151 (258)
T ss_pred CCHHHHHH----------hcCCcCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeEEcCCCCEEEeecccccccC
Confidence 99999993 33578999999999999999999999 5699999999999999999999999998743
Q ss_pred ----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHH
Q 003594 616 ----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEE 673 (808)
Q Consensus 616 ----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~ 673 (808)
..++.++|+||||+++|+|++|..||...... ....+...........|...+..
T Consensus 152 ~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 228 (258)
T cd05578 152 PDTLTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT---IRDQIRAKQETADVLYPATWSTE 228 (258)
T ss_pred CCccccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc---HHHHHHHHhccccccCcccCcHH
Confidence 22478999999999999999999998753210 11222222232445566678899
Q ss_pred HHHHHHHhhccCCCcCccccHH
Q 003594 674 LAGIALKCLSADQDANRDLRIA 695 (808)
Q Consensus 674 l~~Li~~Cl~~dp~p~~Rps~~ 695 (808)
+.+++.+||..| |..||++.
T Consensus 229 ~~~~i~~~l~~~--p~~R~~~~ 248 (258)
T cd05578 229 AIDAINKLLERD--PQKRLGDN 248 (258)
T ss_pred HHHHHHHHccCC--hhHcCCcc
Confidence 999999999999 99999983
No 283
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=99.97 E-value=3e-30 Score=278.64 Aligned_cols=216 Identities=19% Similarity=0.267 Sum_probs=169.2
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCCC-------CHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecC
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNGL-------SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMP 536 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~-------~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~ 536 (808)
+.+|.|+||.||+|.+ +|+.||||.+.... ....+..|+.++.+++||||+++++++.+ ..++||||+
T Consensus 6 ~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~- 84 (298)
T cd07841 6 KKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLVFEFM- 84 (298)
T ss_pred eeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEEEccc-
Confidence 4568899999999998 57899999997321 13457789999999999999999999966 789999999
Q ss_pred CCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-
Q 003594 537 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC- 615 (808)
Q Consensus 537 ~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~- 615 (808)
+|+|.+++... ...+++..++.++.||+.||.|||+ .+|+||||||+|||++.++.++|+|||++..
T Consensus 85 ~~~L~~~i~~~---------~~~~~~~~~~~~~~qi~~al~~lH~---~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~ 152 (298)
T cd07841 85 ETDLEKVIKDK---------SIVLTPADIKSYMLMTLRGLEYLHS---NWILHRDLKPNNLLIASDGVLKLADFGLARSF 152 (298)
T ss_pred CCCHHHHHhcc---------CCCCCHHHHHHHHHHHHHHHHHHHh---CCeeecCCChhhEEEcCCCCEEEccceeeeec
Confidence 89999999422 2369999999999999999999999 5699999999999999999999999998742
Q ss_pred -------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHh-----------
Q 003594 616 -------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVL----------- 659 (808)
Q Consensus 616 -------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~l----------- 659 (808)
..++.++|||||||++|+|++|.+||......... ........
T Consensus 153 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 231 (298)
T cd07841 153 GSPNRKMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQL-GKIFEALGTPTEENWPGVT 231 (298)
T ss_pred cCCCccccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccHHHH-HHHHHHcCCCchhhhhhcc
Confidence 12467899999999999999998887532210000 00000000
Q ss_pred ---cc----CCC-----CCChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 660 ---DG----NAG-----IWPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 660 ---d~----~~~-----~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
+. ... ......+..+.+++.+||..+ |..||++.+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~--P~~R~s~~e~l~ 281 (298)
T cd07841 232 SLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLN--PNKRITARQALE 281 (298)
T ss_pred cccccccccccCCcchhhhcccccHHHHHHHHHHhcCC--cccCcCHHHHhh
Confidence 00 000 011245678999999999999 999999999986
No 284
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.97 E-value=3.1e-30 Score=273.05 Aligned_cols=206 Identities=20% Similarity=0.280 Sum_probs=171.9
Q ss_pred cccCCceEEEEEEEC--CeEEEEEEccCC-----CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCH
Q 003594 470 KCAGDWTNVYRGRLN--HASVAIKTLNNG-----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNL 540 (808)
Q Consensus 470 ~g~G~~g~Vy~~~~~--~~~vAiK~l~~~-----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL 540 (808)
+|.|+||.||++.+. +..||+|++... ...+.+.+|+.+++.++||||+++++++.+ ..++||||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 478999999999995 899999998732 223678999999999999999999999865 78999999999999
Q ss_pred HHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-----
Q 003594 541 RDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC----- 615 (808)
Q Consensus 541 ~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~----- 615 (808)
.+++. ....+++..+..++.||+.||.|||+ .+++|+||+|+||+++.++.++|+|||++..
T Consensus 81 ~~~l~----------~~~~l~~~~~~~~~~~i~~~l~~lH~---~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~ 147 (262)
T cd05572 81 WTILR----------DRGLFDEYTARFYIACVVLAFEYLHN---RGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ 147 (262)
T ss_pred HHHHh----------hcCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc
Confidence 99994 33458999999999999999999999 5699999999999999999999999999753
Q ss_pred -------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhc-cCCCCCChhhHHHHH
Q 003594 616 -------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLD-GNAGIWPLDLAEELA 675 (808)
Q Consensus 616 -------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld-~~~~~~p~~~~~~l~ 675 (808)
..++.++|+||||+++|+|++|.+||..... .....+..+.. ......|...+..+.
T Consensus 148 ~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (262)
T cd05572 148 KTWTFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDE---DPMEIYNDILKGNGKLEFPNYIDKAAK 224 (262)
T ss_pred ccccccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCC---CHHHHHHHHhccCCCCCCCcccCHHHH
Confidence 2356789999999999999999999975421 01222333332 344556666788999
Q ss_pred HHHHHhhccCCCcCcccc
Q 003594 676 GIALKCLSADQDANRDLR 693 (808)
Q Consensus 676 ~Li~~Cl~~dp~p~~Rps 693 (808)
+++.+||..+ |..||+
T Consensus 225 ~~i~~~l~~~--p~~R~~ 240 (262)
T cd05572 225 DLIKQLLRRN--PEERLG 240 (262)
T ss_pred HHHHHHccCC--hhhCcC
Confidence 9999999999 999999
No 285
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.97 E-value=2.4e-30 Score=272.98 Aligned_cols=211 Identities=22% Similarity=0.319 Sum_probs=172.3
Q ss_pred cccCCceEEEEEEE--CCeEEEEEEccCC-----CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCH
Q 003594 470 KCAGDWTNVYRGRL--NHASVAIKTLNNG-----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNL 540 (808)
Q Consensus 470 ~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL 540 (808)
+|.|+||.||++.+ +|..|++|++... .....+.+|+.++.+++||||+++++.+.. ..|+||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 36789999999999 4899999998732 234578899999999999999999998865 68999999999999
Q ss_pred HHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-----
Q 003594 541 RDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC----- 615 (808)
Q Consensus 541 ~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~----- 615 (808)
.+++.. ...+++..+..|+.||+.||.|||+ .+++||||+|+||+++.++.++|+|||++..
T Consensus 81 ~~~l~~----------~~~~~~~~~~~i~~qi~~~L~~lH~---~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~ 147 (265)
T cd05579 81 ASLLEN----------VGSLDEDVARIYIAEIVLALEYLHS---NGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRR 147 (265)
T ss_pred HHHHHH----------cCCCCHHHHHHHHHHHHHHHHHHHH---cCeecCCCCHHHeEEcCCCCEEEEecccchhcccCc
Confidence 999943 3478999999999999999999999 5699999999999999999999999997642
Q ss_pred ----------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCC
Q 003594 616 ----------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWP 667 (808)
Q Consensus 616 ----------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p 667 (808)
...+.++||||||+++|+|++|.+||..... ......+.. ....+|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~-----~~~~~~~~~-~~~~~~ 221 (265)
T cd05579 148 QINLNDDEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETP-----EEIFQNILN-GKIEWP 221 (265)
T ss_pred ccccccccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHhc-CCcCCC
Confidence 1245689999999999999999999865321 122222222 223444
Q ss_pred hhh--HHHHHHHHHHhhccCCCcCccccHHhhHHHH
Q 003594 668 LDL--AEELAGIALKCLSADQDANRDLRIAGVMKEL 701 (808)
Q Consensus 668 ~~~--~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L 701 (808)
... +..+.+++.+||+.+ |..||++..+.+.|
T Consensus 222 ~~~~~~~~~~~~i~~~l~~~--p~~Rpt~~~~~~~l 255 (265)
T cd05579 222 EDVEVSDEAIDLISKLLVPD--PEKRLGAKSIEEIK 255 (265)
T ss_pred ccccCCHHHHHHHHHHhcCC--HhhcCCCccHHHHh
Confidence 444 889999999999999 99999996655544
No 286
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=1.8e-30 Score=292.34 Aligned_cols=215 Identities=16% Similarity=0.208 Sum_probs=166.9
Q ss_pred ccccccCCceEEEEEEEC----CeEEEEEEccCCCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCH
Q 003594 467 FRLKCAGDWTNVYRGRLN----HASVAIKTLNNGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNL 540 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~~----~~~vAiK~l~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL 540 (808)
.+.+|.|+||.||++... +..||+|.+... ..+.+|+.+|++++|||||++++++.. ..|+||||+. ++|
T Consensus 97 ~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~---~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l 172 (392)
T PHA03207 97 LSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG---KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVMPKYK-CDL 172 (392)
T ss_pred EEeecCCCCeEEEEEEEcCCccceeEEEEecccc---ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEehhcC-CCH
Confidence 456689999999999862 478999998643 345689999999999999999998864 7899999995 789
Q ss_pred HHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-----
Q 003594 541 RDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC----- 615 (808)
Q Consensus 541 ~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~----- 615 (808)
.+++. ....+++..++.|+.||+.||.|||+ .+|+||||||+|||++.++.+||+|||++..
T Consensus 173 ~~~l~----------~~~~l~~~~~~~i~~ql~~aL~~LH~---~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~ 239 (392)
T PHA03207 173 FTYVD----------RSGPLPLEQAITIQRRLLEALAYLHG---RGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHP 239 (392)
T ss_pred HHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEccCccccccCccc
Confidence 99882 34679999999999999999999999 6699999999999999999999999998742
Q ss_pred ----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHh------hh--------------cH-
Q 003594 616 ----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAM------AL--------------DQ- 652 (808)
Q Consensus 616 ----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~------~~--------------~~- 652 (808)
..++.++|||||||++|||++|+.||....... .. ..
T Consensus 240 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~ 319 (392)
T PHA03207 240 DTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGST 319 (392)
T ss_pred ccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccch
Confidence 235788999999999999999999985321100 00 00
Q ss_pred ---HHHHHHhccCCCCC--C-----hhhHHHHHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 653 ---TTLMQVLDGNAGIW--P-----LDLAEELAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 653 ---~~~~~~ld~~~~~~--p-----~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
..+..........+ | ...+.++.++|.+||..| |..||++.+++..
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~d--p~~Rpsa~e~l~~ 375 (392)
T PHA03207 320 NLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFD--QEFRPSAQDILSL 375 (392)
T ss_pred hHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccC--hhhCCCHHHHhhC
Confidence 00001111111111 1 124567889999999999 9999999999865
No 287
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=99.97 E-value=4.6e-30 Score=271.67 Aligned_cols=215 Identities=22% Similarity=0.311 Sum_probs=174.8
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCC---CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCH
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNG---LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNL 540 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~---~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL 540 (808)
+.+|.|+||.||+|.. ++..||+|++... .....+.+|+.+++.++||||+++++.+.. ..++||||+++++|
T Consensus 7 ~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~l 86 (267)
T cd06610 7 EVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPYLSGGSL 86 (267)
T ss_pred eeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEeccCCCcH
Confidence 4567899999999997 6789999998732 234678999999999999999999998855 78999999999999
Q ss_pred HHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-----
Q 003594 541 RDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC----- 615 (808)
Q Consensus 541 ~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~----- 615 (808)
.+++... .....+++.....++.|++.||.|||+ .+|+||||+|+||++++++.++|+|||++..
T Consensus 87 ~~~~~~~-------~~~~~~~~~~~~~~~~ql~~al~~lh~---~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~ 156 (267)
T cd06610 87 LDIMKSS-------YPRGGLDEAIIATVLKEVLKGLEYLHS---NGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGG 156 (267)
T ss_pred HHHHHHh-------cccCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCc
Confidence 9999643 123568999999999999999999999 5699999999999999999999999998631
Q ss_pred ------------------------C-CCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCC---
Q 003594 616 ------------------------D-QLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWP--- 667 (808)
Q Consensus 616 ------------------------~-~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p--- 667 (808)
. .++.++|+|||||++|+|++|+.||..... ...+...+......++
T Consensus 157 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~ 231 (267)
T cd06610 157 DRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPP-----MKVLMLTLQNDPPSLETGA 231 (267)
T ss_pred cccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccCh-----hhhHHHHhcCCCCCcCCcc
Confidence 1 356789999999999999999999865322 1122222222221121
Q ss_pred --hhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 668 --LDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 668 --~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
..++..+.+++.+||..| |..||++.+++.
T Consensus 232 ~~~~~~~~~~~li~~~l~~~--p~~Rp~~~~ll~ 263 (267)
T cd06610 232 DYKKYSKSFRKMISLCLQKD--PSKRPTAEELLK 263 (267)
T ss_pred ccccccHHHHHHHHHHcCCC--hhhCcCHHHHhh
Confidence 256789999999999999 999999998875
No 288
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=2.4e-30 Score=295.38 Aligned_cols=219 Identities=16% Similarity=0.235 Sum_probs=166.1
Q ss_pred cccccccccccCCceEEEEEEE--CCeEEEEEEccCCCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCC
Q 003594 462 DFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPN 537 (808)
Q Consensus 462 ~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~ 537 (808)
+|.. ...+|.|+||.||++.+ .++.||||... ...+.+|+.+|++|+|||||++++++.. ..+|||||+.
T Consensus 170 gy~i-~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~----~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~~~- 243 (461)
T PHA03211 170 GFAI-HRALTPGSEGCVFESSHPDYPQRVVVKAGW----YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPKYR- 243 (461)
T ss_pred CeEE-EEEEccCCCeEEEEEEECCCCCEEEEeccc----ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEccC-
Confidence 3443 35678999999999999 46889999643 2346789999999999999999998754 7899999995
Q ss_pred CCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--
Q 003594 538 GNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-- 615 (808)
Q Consensus 538 gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-- 615 (808)
++|.+++.. ....++|..++.|+.||+.||.|||+ .+|+||||||+||||+.++.+||+|||+++.
T Consensus 244 ~~L~~~l~~---------~~~~l~~~~~~~i~~qi~~aL~yLH~---~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~ 311 (461)
T PHA03211 244 SDLYTYLGA---------RLRPLGLAQVTAVARQLLSAIDYIHG---EGIIHRDIKTENVLVNGPEDICLGDFGAACFAR 311 (461)
T ss_pred CCHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHH---CCEEECcCCHHHEEECCCCCEEEcccCCceecc
Confidence 799998842 23469999999999999999999999 6699999999999999999999999998742
Q ss_pred -------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHH-H-hhhcHHHHHHHhcc-------
Q 003594 616 -------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEK-A-MALDQTTLMQVLDG------- 661 (808)
Q Consensus 616 -------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~-~-~~~~~~~~~~~ld~------- 661 (808)
..++.++|||||||+||||++|..|+..... . .......+..++..
T Consensus 312 ~~~~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~ 391 (461)
T PHA03211 312 GSWSTPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDE 391 (461)
T ss_pred cccccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhcccccc
Confidence 2367889999999999999998755421100 0 00000011111100
Q ss_pred -------------------------CCCCCCh--hhHHHHHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 662 -------------------------NAGIWPL--DLAEELAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 662 -------------------------~~~~~p~--~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
....|.. .....+.+|+.+||..| |++|||+.|+++.
T Consensus 392 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~D--P~~RPsa~elL~h 455 (461)
T PHA03211 392 FPQHAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFD--GARRPSAAELLRL 455 (461)
T ss_pred CCCCcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccC--hhhCcCHHHHhhC
Confidence 0001111 23457899999999999 9999999999863
No 289
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.97 E-value=3e-31 Score=293.67 Aligned_cols=219 Identities=21% Similarity=0.293 Sum_probs=176.7
Q ss_pred ccccccccccCCceEEEEEEE--CCeEEEEEEcc------CCCCHHHHHHHHHHHhccCCCCccceeecccc----ceEE
Q 003594 463 FSERFRLKCAGDWTNVYRGRL--NHASVAIKTLN------NGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE----LKCI 530 (808)
Q Consensus 463 f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~------~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~----~~~l 530 (808)
|..-..++|+|+|-+||+|.+ +|..||--.++ .....+.|..|+.+|+.|+|||||++|.++.+ ...+
T Consensus 41 y~k~~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~ 120 (632)
T KOG0584|consen 41 YLKFDEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINF 120 (632)
T ss_pred eeehhhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeee
Confidence 333345679999999999998 56667654443 22334789999999999999999999999966 4679
Q ss_pred EEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCC-ccEEEEe
Q 003594 531 VFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRN-LVAKISG 609 (808)
Q Consensus 531 V~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~-~~~kl~D 609 (808)
|+|.+..|+|..|+.+ .+.++......|+.||+.||.|||++. +||||||||.+||+|+.+ |.+||+|
T Consensus 121 iTEL~TSGtLr~Y~kk----------~~~vn~kaik~W~RQILkGL~yLHs~~-PPIIHRDLKCDNIFinG~~G~VKIGD 189 (632)
T KOG0584|consen 121 ITELFTSGTLREYRKK----------HRRVNIKAIKSWCRQILKGLVYLHSQD-PPIIHRDLKCDNIFVNGNLGEVKIGD 189 (632)
T ss_pred eeecccCCcHHHHHHH----------hccCCHHHHHHHHHHHHHHhhhhhcCC-CCccccccccceEEEcCCcCceeecc
Confidence 9999999999999954 456888899999999999999999998 699999999999999865 8999999
Q ss_pred CCCccc----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCC-C
Q 003594 610 LGLNIC----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGI-W 666 (808)
Q Consensus 610 fGla~~----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~-~ 666 (808)
+|||.. +.|+..+||||||++|+||+|+..||.... .....+..+..+..+. +
T Consensus 190 LGLAtl~r~s~aksvIGTPEFMAPEmYEE~YnE~VDVYaFGMCmLEMvT~eYPYsEC~----n~AQIYKKV~SGiKP~sl 265 (632)
T KOG0584|consen 190 LGLATLLRKSHAKSVIGTPEFMAPEMYEENYNELVDVYAFGMCMLEMVTSEYPYSECT----NPAQIYKKVTSGIKPAAL 265 (632)
T ss_pred hhHHHHhhccccceeccCccccChHHHhhhcchhhhhhhhhHHHHHHHhccCChhhhC----CHHHHHHHHHcCCCHHHh
Confidence 999854 468999999999999999999999986532 2234444555443221 1
Q ss_pred ChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 667 PLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 667 p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
..--.+++.+||.+||.. ...|||+.|+|.
T Consensus 266 ~kV~dPevr~fIekCl~~---~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 266 SKVKDPEVREFIEKCLAT---KSERLSAKELLK 295 (632)
T ss_pred hccCCHHHHHHHHHHhcC---chhccCHHHHhh
Confidence 112246899999999987 478999999885
No 290
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=99.97 E-value=3.8e-30 Score=275.66 Aligned_cols=218 Identities=18% Similarity=0.265 Sum_probs=168.5
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCCC----CHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCC
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNGL----SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGN 539 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~----~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gs 539 (808)
..+|.|+||.||+|.. +|..||||.+.... ....+.+|++++++++||||+++++++.+ ..++||||+. ++
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~-~~ 84 (284)
T cd07860 6 EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-QD 84 (284)
T ss_pred eeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeeccc-cC
Confidence 4557899999999998 67899999987321 23578899999999999999999999865 7899999996 68
Q ss_pred HHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc----
Q 003594 540 LRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC---- 615 (808)
Q Consensus 540 L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~---- 615 (808)
|.+++... ....+++..+..++.|++.||+|||+ .+++||||+|+||+++.++.+||+|||++..
T Consensus 85 l~~~~~~~--------~~~~l~~~~~~~~~~~i~~~l~~lh~---~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~ 153 (284)
T cd07860 85 LKKFMDAS--------PLSGIPLPLIKSYLFQLLQGLAFCHS---HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVP 153 (284)
T ss_pred HHHHHHhC--------CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEeeccchhhcccC
Confidence 99988542 34568999999999999999999999 5699999999999999999999999998642
Q ss_pred ----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcH----------HH---HHHHh-
Q 003594 616 ----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQ----------TT---LMQVL- 659 (808)
Q Consensus 616 ----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~----------~~---~~~~l- 659 (808)
..++.++||||||+++|+|+||+.||........... .. ...+.
T Consensus 154 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07860 154 VRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSLPD 233 (284)
T ss_pred ccccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhhhhhhHHHH
Confidence 1136789999999999999999999854221100000 00 00000
Q ss_pred -----c----cCCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 660 -----D----GNAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 660 -----d----~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
. ..........+..+.+++.+||+.| |.+||++.+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~--P~~Rpt~~~~l~ 280 (284)
T cd07860 234 YKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYD--PNKRISAKAALA 280 (284)
T ss_pred HHhhcccccccCHHHHcccCCHHHHHHHHHhcCCC--cccCCCHHHHhc
Confidence 0 0000111235678899999999999 999999998874
No 291
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.97 E-value=3.5e-30 Score=286.40 Aligned_cols=214 Identities=19% Similarity=0.295 Sum_probs=162.4
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccCCCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCHHH
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNNGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNLRD 542 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL~~ 542 (808)
.+.+|.|+||.||+|.. ++..||+|+.... ....|+.++++++||||++++++|.+ ..++||||+. |+|.+
T Consensus 71 ~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~----~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~l~~ 145 (357)
T PHA03209 71 IKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG----TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLPHYS-SDLYT 145 (357)
T ss_pred EEEecCCCCeEEEEEEECCCCceEEEEeCCcc----ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEEccC-CcHHH
Confidence 35568999999999998 4578999986532 34569999999999999999999865 6789999995 78999
Q ss_pred HHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-------
Q 003594 543 KLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC------- 615 (808)
Q Consensus 543 ~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~------- 615 (808)
++.. ....++|..++.|+.||+.||.|||+ .+|+||||||+|||++.++.+||+|||++..
T Consensus 146 ~l~~---------~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 213 (357)
T PHA03209 146 YLTK---------RSRPLPIDQALIIEKQILEGLRYLHA---QRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAF 213 (357)
T ss_pred HHHh---------ccCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEecCccccccccCccc
Confidence 8853 34578999999999999999999999 5699999999999999999999999999852
Q ss_pred -----------------CCCCcchhhHhHHHHHHHHHcCCC-CchhhHH----HhhhcHHHHHHHhcc---CCCCCC---
Q 003594 616 -----------------DQLNVRSDIRAFGTLLLHLLTGRN-WAGLVEK----AMALDQTTLMQVLDG---NAGIWP--- 667 (808)
Q Consensus 616 -----------------~~~t~ksDVwS~Gvil~elltG~~-P~~~~~~----~~~~~~~~~~~~ld~---~~~~~p--- 667 (808)
..++.++|||||||++|||+++.. +|..... ........+..++.. ....++
T Consensus 214 ~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 293 (357)
T PHA03209 214 LGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEFPRDP 293 (357)
T ss_pred ccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhcCCCC
Confidence 246789999999999999998544 3332100 000001111111110 000011
Q ss_pred ---------------------------hhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 668 ---------------------------LDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 668 ---------------------------~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
...+..+.+||.+||+.| |.+|||+.++++
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~d--P~~Rpta~e~l~ 350 (357)
T PHA03209 294 GSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFD--AAMRPSAEEILN 350 (357)
T ss_pred ccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCC--cccCcCHHHHhc
Confidence 123456677999999999 999999999875
No 292
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.97 E-value=4e-30 Score=279.48 Aligned_cols=213 Identities=23% Similarity=0.334 Sum_probs=171.3
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCC--CC---HHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCC
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNG--LS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNG 538 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~--~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~g 538 (808)
+.+|.|+||.||+|.. +|..||+|.+... .. ...+.+|+.+++.++||||++++++|.+ ..++||||++ |
T Consensus 21 ~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~-g 99 (307)
T cd06607 21 REIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVMEYCL-G 99 (307)
T ss_pred eeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEHHhhC-C
Confidence 5578999999999998 5899999998622 11 2468899999999999999999999865 7899999997 6
Q ss_pred CHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc---
Q 003594 539 NLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC--- 615 (808)
Q Consensus 539 sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~--- 615 (808)
+|.+++.. ....+++..+..++.|++.||.|||+ .+|+||||+|+||+++.++.+||+|||++..
T Consensus 100 ~l~~~~~~---------~~~~l~~~~~~~~~~ql~~~L~~LH~---~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~ 167 (307)
T cd06607 100 SASDILEV---------HKKPLQEVEIAAICHGALQGLAYLHS---HERIHRDIKAGNILLTEPGTVKLADFGSASLVSP 167 (307)
T ss_pred CHHHHHHH---------cccCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcccEEECCCCCEEEeecCcceecCC
Confidence 88887742 23468999999999999999999999 5699999999999999999999999998742
Q ss_pred ---------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCC-ChhhHHH
Q 003594 616 ---------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIW-PLDLAEE 673 (808)
Q Consensus 616 ---------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~-p~~~~~~ 673 (808)
..++.++||||||+++|+|+||.+||...... .....+.....+.. +..++..
T Consensus 168 ~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 242 (307)
T cd06607 168 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-----SALYHIAQNDSPTLSSNDWSDY 242 (307)
T ss_pred CCCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHH-----HHHHHHhcCCCCCCCchhhCHH
Confidence 13567899999999999999999998643221 11112221111222 3346778
Q ss_pred HHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 674 LAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 674 l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
+.+++.+||..+ |..||++.+|+..
T Consensus 243 ~~~li~~~l~~~--p~~Rp~~~~il~~ 267 (307)
T cd06607 243 FRNFVDSCLQKI--PQDRPSSEELLKH 267 (307)
T ss_pred HHHHHHHHhcCC--hhhCcCHHHHhcC
Confidence 999999999999 9999999999864
No 293
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.97 E-value=4.7e-30 Score=274.86 Aligned_cols=217 Identities=20% Similarity=0.250 Sum_probs=170.6
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCC----CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCC
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNG----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGN 539 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gs 539 (808)
+.+|.|+||.||+|.+ +|..||+|++... .....+.+|+.++++++||||+++++++.+ ..++||||+ +++
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~-~~~ 84 (286)
T cd07832 6 GRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEYM-PSD 84 (286)
T ss_pred eecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEeccc-CCC
Confidence 4568999999999998 5789999998732 234679999999999999999999999865 789999999 999
Q ss_pred HHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc----
Q 003594 540 LRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC---- 615 (808)
Q Consensus 540 L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~---- 615 (808)
|.+++... ...+++..++.++.||+.||.|||+ .+|+|+||||+||+++.++.++|+|||++..
T Consensus 85 L~~~~~~~---------~~~~~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~ 152 (286)
T cd07832 85 LSEVLRDE---------ERPLPEAQVKSYMRMLLKGVAYMHA---NGIMHRDLKPANLLISADGVLKIADFGLARLFSEE 152 (286)
T ss_pred HHHHHHhc---------CCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCcCHHHEEEcCCCcEEEeeeeecccccCC
Confidence 99998532 3569999999999999999999999 5699999999999999999999999997642
Q ss_pred -----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhc----------HHHHH------
Q 003594 616 -----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALD----------QTTLM------ 656 (808)
Q Consensus 616 -----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~----------~~~~~------ 656 (808)
..++.++||||||+++|+|+||.+||.......... ...+.
T Consensus 153 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (286)
T cd07832 153 EPRLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWPGLTSLP 232 (286)
T ss_pred CCCccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHhhccCcc
Confidence 124678999999999999999988875321100000 00000
Q ss_pred ---HHhccCCC-----CCChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 657 ---QVLDGNAG-----IWPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 657 ---~~ld~~~~-----~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
.+..+... ......+..+.+++.+||..+ |++||++.+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~--p~~R~~~~~~l~ 281 (286)
T cd07832 233 DYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYD--PSKRLSAAEALR 281 (286)
T ss_pred hhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccC--hhhCCCHHHHhh
Confidence 00000000 011245689999999999999 999999999875
No 294
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.97 E-value=3.8e-30 Score=275.69 Aligned_cols=213 Identities=23% Similarity=0.276 Sum_probs=168.0
Q ss_pred ccccCCceEEEEEEE--CCeEEEEEEccCCC-----CHHHHHHHHH---HHhccCCCCccceeecccc--ceEEEEeecC
Q 003594 469 LKCAGDWTNVYRGRL--NHASVAIKTLNNGL-----SEEDFQAKVS---FLTAVRHPHLVAVMGCCSE--LKCIVFEYMP 536 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~-----~~~~~~~Ei~---il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~ 536 (808)
++|.|+||.||++.. +++.||+|.+.... ....+..|.. +++...||||+++++++.+ ..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 368899999999987 57899999986321 1123444443 3444589999999998865 7899999999
Q ss_pred CCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-
Q 003594 537 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC- 615 (808)
Q Consensus 537 ~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~- 615 (808)
||+|.+++. ....+++..+..|+.|++.||.|||+ .+|+||||||+||+++.++.+||+|||++..
T Consensus 81 g~~L~~~l~----------~~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~di~p~nili~~~~~~kl~dfg~~~~~ 147 (278)
T cd05606 81 GGDLHYHLS----------QHGVFSEAEMRFYAAEIILGLEHMHN---RFVVYRDLKPANILLDEHGHVRISDLGLACDF 147 (278)
T ss_pred CCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHH---CCEEcCCCCHHHEEECCCCCEEEccCcCcccc
Confidence 999999883 34579999999999999999999999 5699999999999999999999999998742
Q ss_pred -----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHH
Q 003594 616 -----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAE 672 (808)
Q Consensus 616 -----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~ 672 (808)
..++.++|||||||++|+|++|+.||...... ...............+|...+.
T Consensus 148 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~s~ 224 (278)
T cd05606 148 SKKKPHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTK---DKHEIDRMTLTMAVELPDSFSP 224 (278)
T ss_pred CccCCcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCcc---chHHHHHHhhccCCCCCCcCCH
Confidence 13678899999999999999999999653211 1112222222234456666789
Q ss_pred HHHHHHHHhhccCCCcCccc-----cHHhhHH
Q 003594 673 ELAGIALKCLSADQDANRDL-----RIAGVMK 699 (808)
Q Consensus 673 ~l~~Li~~Cl~~dp~p~~Rp-----s~~evl~ 699 (808)
.+.+++.+||..+ |..|| ++.++++
T Consensus 225 ~~~~li~~~l~~~--p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 225 ELRSLLEGLLQRD--VNRRLGCLGRGAQEVKE 254 (278)
T ss_pred HHHHHHHHHhhcC--HHhccCCCCCCHHHHHh
Confidence 9999999999999 99999 7777763
No 295
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.6e-31 Score=290.04 Aligned_cols=220 Identities=18% Similarity=0.283 Sum_probs=181.0
Q ss_pred ccccccccccccCCceEEEEEEE--CCeEEEEEEccC--CCCHHHHHHHHHHHhccCCCCccceeecc--ccceEEEEee
Q 003594 461 EDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN--GLSEEDFQAKVSFLTAVRHPHLVAVMGCC--SELKCIVFEY 534 (808)
Q Consensus 461 ~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~--~~~~~~~~~Ei~il~~l~HpnIv~l~g~~--~~~~~lV~Ey 534 (808)
++|-+...-+|.|+||.||++.. ++...|.|++.. ....++|.-||+||+.++||+||+|++.| .+.+||+.||
T Consensus 31 ~d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEF 110 (1187)
T KOG0579|consen 31 RDHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEF 110 (1187)
T ss_pred HHHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEee
Confidence 34555555568999999999997 455678888873 33357899999999999999999999865 4589999999
Q ss_pred cCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCcc
Q 003594 535 MPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNI 614 (808)
Q Consensus 535 ~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~ 614 (808)
|.||-+..++.. -..+|++.++.-+++|++.||.|||+ .+|||||||..|||++-+|.++|+|||.+-
T Consensus 111 C~GGAVDaimlE---------L~r~LtE~QIqvvc~q~ldALn~LHs---~~iIHRDLKAGNiL~TldGdirLADFGVSA 178 (1187)
T KOG0579|consen 111 CGGGAVDAIMLE---------LGRVLTEDQIQVVCYQVLDALNWLHS---QNIIHRDLKAGNILLTLDGDIRLADFGVSA 178 (1187)
T ss_pred cCCchHhHHHHH---------hccccchHHHHHHHHHHHHHHHHHhh---cchhhhhccccceEEEecCcEeeecccccc
Confidence 999999998864 35689999999999999999999999 569999999999999999999999999872
Q ss_pred c------------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHh--ccC
Q 003594 615 C------------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVL--DGN 662 (808)
Q Consensus 615 ~------------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~l--d~~ 662 (808)
. ..|+.++||||||++|.||.-+.||...+.. ...+..+. ++.
T Consensus 179 Kn~~t~qkRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp-----MRVllKiaKSePP 253 (1187)
T KOG0579|consen 179 KNKSTRQKRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNP-----MRVLLKIAKSEPP 253 (1187)
T ss_pred cchhHHhhhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccch-----HHHHHHHhhcCCC
Confidence 1 3589999999999999999999999765322 11122222 233
Q ss_pred CCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 663 AGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 663 ~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
....|...+..|.+++.+||.+| |+.||+++++++
T Consensus 254 TLlqPS~Ws~~F~DfLk~cL~Kn--p~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 254 TLLQPSHWSRSFSDFLKRCLVKN--PRNRPPAAQLLK 288 (1187)
T ss_pred cccCcchhhhHHHHHHHHHHhcC--CccCCCHHHHhh
Confidence 33456678899999999999999 999999999874
No 296
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.97 E-value=5.7e-30 Score=274.95 Aligned_cols=221 Identities=19% Similarity=0.285 Sum_probs=178.3
Q ss_pred hhccccccccccccCCceEEEEEEEC--CeEEEEEEccCCC-CHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEe
Q 003594 459 ATEDFSERFRLKCAGDWTNVYRGRLN--HASVAIKTLNNGL-SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFE 533 (808)
Q Consensus 459 at~~f~~~~~i~g~G~~g~Vy~~~~~--~~~vAiK~l~~~~-~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~E 533 (808)
.+++|... ..+|.|+||.||+|.+. +..|++|++.... ....+.+|++++..++||||+++++++.. ..++|+|
T Consensus 17 ~~~~~~~~-~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 95 (286)
T cd06614 17 PRELYKNL-EKIGEGASGEVYKATDRATGKEVAIKKMRLRKQNKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVME 95 (286)
T ss_pred ccccchHh-HhccCCCCeEEEEEEEccCCcEEEEEEEecCchhHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence 34445443 56678999999999994 7899999998433 36778999999999999999999999854 7899999
Q ss_pred ecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCc
Q 003594 534 YMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 613 (808)
Q Consensus 534 y~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla 613 (808)
|+++++|.+++... ...+++..+..|+.|++.||.|||+ .+|+|+||+|+||+++.++.++|+|||++
T Consensus 96 ~~~~~~L~~~l~~~---------~~~l~~~~~~~i~~~i~~~L~~lH~---~gi~H~dl~p~ni~i~~~~~~~l~d~~~~ 163 (286)
T cd06614 96 YMDGGSLTDIITQN---------FVRMNEPQIAYVCREVLQGLEYLHS---QNVIHRDIKSDNILLSKDGSVKLADFGFA 163 (286)
T ss_pred ccCCCcHHHHHHHh---------ccCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCChhhEEEcCCCCEEECccchh
Confidence 99999999999532 1379999999999999999999999 66999999999999999999999999975
Q ss_pred cc-------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCC--CC
Q 003594 614 IC-------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG--IW 666 (808)
Q Consensus 614 ~~-------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~--~~ 666 (808)
.. ..++.++||||||+++|+|++|+.||...... .....+...... ..
T Consensus 164 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~ 238 (286)
T cd06614 164 AQLTKEKSKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL-----RALFLITTKGIPPLKN 238 (286)
T ss_pred hhhccchhhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHhcCCCCCcc
Confidence 32 23577899999999999999999998653221 111122221111 12
Q ss_pred ChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 667 PLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 667 p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
+..++..+.+++.+||+.+ |..||++.+++.
T Consensus 239 ~~~~~~~l~~li~~~l~~~--p~~Rpt~~~il~ 269 (286)
T cd06614 239 PEKWSPEFKDFLNKCLVKD--PEKRPSAEELLQ 269 (286)
T ss_pred hhhCCHHHHHHHHHHhccC--hhhCcCHHHHhh
Confidence 2236788999999999999 999999999976
No 297
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.97 E-value=5.2e-30 Score=271.03 Aligned_cols=213 Identities=23% Similarity=0.339 Sum_probs=173.4
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCC-C---CHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCC
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNG-L---SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGN 539 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-~---~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gs 539 (808)
+.+|.|+||.||+|.. ++..||+|.+... . ....+.+|+.+++.++||||+++++++.+ ..++|+||+++++
T Consensus 6 ~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~ 85 (264)
T cd06626 6 NKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEYCSGGT 85 (264)
T ss_pred eEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEecCCCCc
Confidence 4568999999999997 5789999998832 2 34678999999999999999999999854 7899999999999
Q ss_pred HHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc----
Q 003594 540 LRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC---- 615 (808)
Q Consensus 540 L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~---- 615 (808)
|.+++. ....+++..+..|+.+++.||.|||+ .+|+|+||+|+||+++.++.+||+|||++..
T Consensus 86 L~~~~~----------~~~~~~~~~~~~i~~~i~~~l~~lh~---~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~ 152 (264)
T cd06626 86 LEELLE----------HGRILDEHVIRVYTLQLLEGLAYLHS---HGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNN 152 (264)
T ss_pred HHHHHh----------hcCCCChHHHHHHHHHHHHHHHHHHH---CCcccCCCCHHHEEECCCCCEEEcccccccccCCC
Confidence 999994 33458899999999999999999999 5699999999999999999999999997642
Q ss_pred -------------------------C---CCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCC
Q 003594 616 -------------------------D---QLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWP 667 (808)
Q Consensus 616 -------------------------~---~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p 667 (808)
. .++.++||||||+++|+|++|+.||...... ......+........|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~----~~~~~~~~~~~~~~~~ 228 (264)
T cd06626 153 TTTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE----FQIMFHVGAGHKPPIP 228 (264)
T ss_pred CCcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch----HHHHHHHhcCCCCCCC
Confidence 0 1567899999999999999999999643211 1111112222233334
Q ss_pred hh--hHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 668 LD--LAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 668 ~~--~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
.. ++..+.+++.+||+.+ |..||++.+++.
T Consensus 229 ~~~~~~~~~~~li~~~l~~~--p~~R~~~~~i~~ 260 (264)
T cd06626 229 DSLQLSPEGKDFLDRCLESD--PKKRPTASELLQ 260 (264)
T ss_pred cccccCHHHHHHHHHHccCC--cccCCCHHHHhc
Confidence 33 4788999999999999 999999998764
No 298
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.97 E-value=6.3e-30 Score=274.99 Aligned_cols=212 Identities=18% Similarity=0.214 Sum_probs=172.3
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccC--CCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCH
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNN--GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNL 540 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~--~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL 540 (808)
.+.+|.|+||.||++.. ++..|++|++.. ....+.+.+|+.+++.++||||+++++++.. ..++|+||+++++|
T Consensus 24 ~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~~~L 103 (285)
T cd06648 24 FVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEGGAL 103 (285)
T ss_pred ceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCCCCH
Confidence 35678999999999987 578999999862 2234568899999999999999999998754 78999999999999
Q ss_pred HHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-----
Q 003594 541 RDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC----- 615 (808)
Q Consensus 541 ~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~----- 615 (808)
.+++. . ..+++..+..|+.|++.||.|||+ .+|+||||+|+||+++.++.++|+|||++..
T Consensus 104 ~~~~~----------~-~~~~~~~~~~~~~ql~~~l~~lH~---~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~ 169 (285)
T cd06648 104 TDIVT----------H-TRMNEEQIATVCLAVLKALSFLHA---QGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV 169 (285)
T ss_pred HHHHH----------h-CCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCChhhEEEcCCCcEEEcccccchhhccCC
Confidence 99983 2 458999999999999999999999 5699999999999999999999999997632
Q ss_pred --------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccC--CCCCChhhHHH
Q 003594 616 --------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGN--AGIWPLDLAEE 673 (808)
Q Consensus 616 --------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~--~~~~p~~~~~~ 673 (808)
..++.++||||||+++|+|++|.+||..... ......+.... ....+..++..
T Consensus 170 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 244 (285)
T cd06648 170 PRRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP-----LQAMKRIRDNLPPKLKNLHKVSPR 244 (285)
T ss_pred cccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH-----HHHHHHHHhcCCCCCcccccCCHH
Confidence 2357889999999999999999999864221 11111122111 11223346789
Q ss_pred HHHHHHHhhccCCCcCccccHHhhHH
Q 003594 674 LAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 674 l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
+.+++.+||..+ |..||++.++++
T Consensus 245 l~~li~~~l~~~--p~~Rpt~~~il~ 268 (285)
T cd06648 245 LRSFLDRMLVRD--PAQRATAAELLN 268 (285)
T ss_pred HHHHHHHHcccC--hhhCcCHHHHcc
Confidence 999999999999 999999988874
No 299
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.97 E-value=5.5e-30 Score=275.77 Aligned_cols=224 Identities=18% Similarity=0.247 Sum_probs=169.3
Q ss_pred hccccccccccccCCceEEEEEEE--CCeEEEEEEccCC---CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEE
Q 003594 460 TEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNG---LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVF 532 (808)
Q Consensus 460 t~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~---~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~ 532 (808)
+++|... +.+|.|+||.||+|.. +|..||+|++... .....+.+|+.+++.++|+||+++++++.+ ..|+||
T Consensus 4 ~~~y~~~-~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 4 ATSYLNL-EKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred cceeEEE-EEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 4555543 5568999999999987 5789999998732 223467899999999999999999999865 689999
Q ss_pred eecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCC
Q 003594 533 EYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 612 (808)
Q Consensus 533 Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGl 612 (808)
||+. ++|.+++.. ....+++..+..++.||+.||.|||+ .+|+|+||||+|||++.++.+||+|||+
T Consensus 83 e~~~-~~l~~~~~~---------~~~~~~~~~~~~~~~qi~~~L~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~Dfg~ 149 (291)
T cd07870 83 EYMH-TDLAQYMIQ---------HPGGLHPYNVRLFMFQLLRGLAYIHG---QHILHRDLKPQNLLISYLGELKLADFGL 149 (291)
T ss_pred eccc-CCHHHHHHh---------CCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCChHHEEEcCCCcEEEecccc
Confidence 9996 788777742 23457888999999999999999999 5699999999999999999999999998
Q ss_pred ccc--------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHH----------
Q 003594 613 NIC--------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLM---------- 656 (808)
Q Consensus 613 a~~--------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~---------- 656 (808)
++. ..++.++|||||||++|+|++|.+||.........-.....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (291)
T cd07870 150 ARAKSIPSQTYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTW 229 (291)
T ss_pred ccccCCCCCCCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhh
Confidence 742 12466899999999999999999998643221000000000
Q ss_pred -HHh--ccCC-----CCCC---------hhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 657 -QVL--DGNA-----GIWP---------LDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 657 -~~l--d~~~-----~~~p---------~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
... .... ...+ ...+..+.+++.+|+..| |..|||+.+++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~d--p~~R~t~~~~l~ 287 (291)
T cd07870 230 PGVSKLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMF--PKDRISAQDALL 287 (291)
T ss_pred hhhhhcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcC--cccCcCHHHHhc
Confidence 000 0000 0000 012568899999999999 999999998864
No 300
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.97 E-value=1.1e-31 Score=265.33 Aligned_cols=211 Identities=21% Similarity=0.334 Sum_probs=175.5
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEcc----CCCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCC
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLN----NGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGN 539 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~----~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gs 539 (808)
..+|+|.|+.||++.. +|+.+|+|+++ ...+.+.+.+|+.|-..|+|||||+|...+.+ ..|||+|+|.||+
T Consensus 17 e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvFe~m~G~d 96 (355)
T KOG0033|consen 17 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGE 96 (355)
T ss_pred HHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEEecccchH
Confidence 4578999999999987 78999999987 34466889999999999999999999998866 7799999999999
Q ss_pred HHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccC---CCccEEEEeCCCccc-
Q 003594 540 LRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLD---RNLVAKISGLGLNIC- 615 (808)
Q Consensus 540 L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld---~~~~~kl~DfGla~~- 615 (808)
|..-|- ....+++..+-.++.||+.||.|.|.+ +|||||+||.|+||- ..--+||+|||+|..
T Consensus 97 l~~eIV----------~R~~ySEa~aSH~~rQiLeal~yCH~n---~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l 163 (355)
T KOG0033|consen 97 LFEDIV----------AREFYSEADASHCIQQILEALAYCHSN---GIVHRDLKPENLLLASKAKGAAVKLADFGLAIEV 163 (355)
T ss_pred HHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHhc---CceeccCChhheeeeeccCCCceeecccceEEEe
Confidence 988773 335688889999999999999999994 599999999999994 345799999999853
Q ss_pred -----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhcc----CCCCCCh
Q 003594 616 -----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDG----NAGIWPL 668 (808)
Q Consensus 616 -----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~----~~~~~p~ 668 (808)
..|+..+|||+.|||||-|+.|++||..... ...+..+..+ ..+.|+
T Consensus 164 ~~g~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~-----~rlye~I~~g~yd~~~~~w~- 237 (355)
T KOG0033|consen 164 NDGEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-----HRLYEQIKAGAYDYPSPEWD- 237 (355)
T ss_pred CCccccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccH-----HHHHHHHhccccCCCCcccC-
Confidence 4688999999999999999999999975211 1223333333 222343
Q ss_pred hhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 669 DLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 669 ~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
.++++..+|+.+||..| |.+|.|+.|.++
T Consensus 238 ~is~~Ak~LvrrML~~d--P~kRIta~EAL~ 266 (355)
T KOG0033|consen 238 TVTPEAKSLIRRMLTVN--PKKRITADEALK 266 (355)
T ss_pred cCCHHHHHHHHHHhccC--hhhhccHHHHhC
Confidence 78899999999999999 999999988773
No 301
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.5e-30 Score=302.06 Aligned_cols=220 Identities=22% Similarity=0.279 Sum_probs=183.1
Q ss_pred HHhhccccccccccccCCceEEEEEEE--CCeEEEEEEccC-----CCCHHHHHHHHHHHhccCCCCccceeecccc--c
Q 003594 457 RLATEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN-----GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--L 527 (808)
Q Consensus 457 ~~at~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~-----~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~ 527 (808)
+...++|. ..++||+|+||.|..++. +++.||+|+++. .....-|..|-.+|..-+.+.||+++.+|.+ +
T Consensus 71 rl~~~Dfe-ilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~ 149 (1317)
T KOG0612|consen 71 RLKAEDFE-ILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDERY 149 (1317)
T ss_pred hCCHHhhH-HHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccc
Confidence 33445554 358899999999999998 678999999983 4455779999999999999999999999987 8
Q ss_pred eEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEE
Q 003594 528 KCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKI 607 (808)
Q Consensus 528 ~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl 607 (808)
+|+|||||+||+|..++. ...++|+..+..|+.+|+-||.-||+ .|+|||||||+|||||.+|++||
T Consensus 150 LYlVMdY~pGGDlltLlS----------k~~~~pE~~ArFY~aEiVlAldslH~---mgyVHRDiKPDNvLld~~GHikL 216 (1317)
T KOG0612|consen 150 LYLVMDYMPGGDLLTLLS----------KFDRLPEDWARFYTAEIVLALDSLHS---MGYVHRDIKPDNVLLDKSGHIKL 216 (1317)
T ss_pred eEEEEecccCchHHHHHh----------hcCCChHHHHHHHHHHHHHHHHHHHh---ccceeccCCcceeEecccCcEee
Confidence 999999999999999994 34489999999999999999999999 66999999999999999999999
Q ss_pred EeCCCccc-------------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHH
Q 003594 608 SGLGLNIC-------------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLM 656 (808)
Q Consensus 608 ~DfGla~~-------------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~ 656 (808)
+|||.+-. +.|++.+|+||+||++|||+.|..||.... --+++.
T Consensus 217 ADFGsClkm~~dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYads-----lveTY~ 291 (1317)
T KOG0612|consen 217 ADFGSCLKMDADGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADS-----LVETYG 291 (1317)
T ss_pred ccchhHHhcCCCCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHH-----HHHHHH
Confidence 99998721 458999999999999999999999997532 234455
Q ss_pred HHhcc-CCCCCC--hhhHHHHHHHHHHhhccCCCcCcccc---HHhhH
Q 003594 657 QVLDG-NAGIWP--LDLAEELAGIALKCLSADQDANRDLR---IAGVM 698 (808)
Q Consensus 657 ~~ld~-~~~~~p--~~~~~~l~~Li~~Cl~~dp~p~~Rps---~~evl 698 (808)
.|.+. ....+| ..++++..+||.+.+.. |..|.. +.++-
T Consensus 292 KIm~hk~~l~FP~~~~VSeeakdLI~~ll~~---~e~RLgrngiedik 336 (1317)
T KOG0612|consen 292 KIMNHKESLSFPDETDVSEEAKDLIEALLCD---REVRLGRNGIEDIK 336 (1317)
T ss_pred HHhchhhhcCCCcccccCHHHHHHHHHHhcC---hhhhcccccHHHHH
Confidence 55553 334455 56899999999998864 567776 55543
No 302
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.97 E-value=1.1e-29 Score=277.03 Aligned_cols=213 Identities=24% Similarity=0.312 Sum_probs=173.0
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCCC-----CHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCC
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNGL-----SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNG 538 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~-----~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~g 538 (808)
+.+|.|+||.||+|.. ++..||||.+.... ....+..|+.++..++||||+++++.+.+ ..|+||||+.++
T Consensus 7 ~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 86 (316)
T cd05574 7 KLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVMDYCPGG 86 (316)
T ss_pred eeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEEEecCCC
Confidence 5568899999999998 47999999997322 23568899999999999999999999865 789999999999
Q ss_pred CHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc---
Q 003594 539 NLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC--- 615 (808)
Q Consensus 539 sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~--- 615 (808)
+|.+++... ....+++..+..++.||+.||.|||+ .+++||||||+||+++.++.++|+|||++..
T Consensus 87 ~L~~~~~~~--------~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 155 (316)
T cd05574 87 ELFRLLQRQ--------PGKCLSEEVARFYAAEVLLALEYLHL---LGIVYRDLKPENILLHESGHIMLSDFDLSKQSDV 155 (316)
T ss_pred CHHHHHHhC--------CCCccCHHHHHHHHHHHHHHHHHHHH---CCeeccCCChHHeEEcCCCCEEEeecchhhcccc
Confidence 999998532 34578999999999999999999999 5699999999999999999999999998642
Q ss_pred ---------------------------------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhh
Q 003594 616 ---------------------------------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLV 644 (808)
Q Consensus 616 ---------------------------------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~ 644 (808)
..++.++||||||+++|+|++|..||...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~ 235 (316)
T cd05574 156 EPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGS 235 (316)
T ss_pred cccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCC
Confidence 12456899999999999999999998653
Q ss_pred HHHhhhcHHHHHHHhccCCCCCCh--hhHHHHHHHHHHhhccCCCcCcccc----HHhhHH
Q 003594 645 EKAMALDQTTLMQVLDGNAGIWPL--DLAEELAGIALKCLSADQDANRDLR----IAGVMK 699 (808)
Q Consensus 645 ~~~~~~~~~~~~~~ld~~~~~~p~--~~~~~l~~Li~~Cl~~dp~p~~Rps----~~evl~ 699 (808)
.. ...+..+.... ..++. ..+..+.+++.+||..| |..||+ +.+++.
T Consensus 236 ~~-----~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~--p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 236 NR-----DETFSNILKKE-VTFPGSPPVSSSARDLIRKLLVKD--PSKRLGSKRGAAEIKQ 288 (316)
T ss_pred ch-----HHHHHHHhcCC-ccCCCccccCHHHHHHHHHHccCC--HhHCCCchhhHHHHHc
Confidence 22 22233333321 22232 26889999999999999 999999 555544
No 303
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=99.97 E-value=9.4e-30 Score=272.44 Aligned_cols=219 Identities=18% Similarity=0.260 Sum_probs=170.2
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCC---CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCH
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNG---LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNL 540 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~---~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL 540 (808)
+.+|.|+||.||+|.+ +|..||||++... .....+.+|+.++++++||||++++++|.+ ..+|||||++ |+|
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~~l 84 (284)
T cd07836 6 EKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYMD-KDL 84 (284)
T ss_pred eeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecCC-ccH
Confidence 4557889999999998 5899999998732 234677889999999999999999999865 6899999998 589
Q ss_pred HHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-----
Q 003594 541 RDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC----- 615 (808)
Q Consensus 541 ~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~----- 615 (808)
.+++... .....+++..+..++.||+.||.|||+ .+|+||||||+||++++++.++|+|||++..
T Consensus 85 ~~~~~~~-------~~~~~~~~~~~~~~~~qi~~~l~~lH~---~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~ 154 (284)
T cd07836 85 KKYMDTH-------GVRGALDPNTVKSFTYQLLKGIAFCHE---NRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPV 154 (284)
T ss_pred HHHHHhc-------CCCCCcCHHHHHHHHHHHHHHHHHHHH---CCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc
Confidence 9988543 223568999999999999999999999 5699999999999999999999999998742
Q ss_pred ---------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhh----------cHHHHHHHhc--cC
Q 003594 616 ---------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMAL----------DQTTLMQVLD--GN 662 (808)
Q Consensus 616 ---------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~----------~~~~~~~~ld--~~ 662 (808)
..++.++|||||||++|+|++|++||......... ....+..+.. ..
T Consensus 155 ~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (284)
T cd07836 155 NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWPGISQLPEY 234 (284)
T ss_pred cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhHHHHhcCchh
Confidence 12467899999999999999999998643211000 0000100100 00
Q ss_pred CCC-----------CChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 663 AGI-----------WPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 663 ~~~-----------~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
... +.+..+..+.+++.+||+.| |.+||++.+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~--p~~R~~~~~~l~ 280 (284)
T cd07836 235 KPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLN--PELRISAHDALQ 280 (284)
T ss_pred cccccCCChHHHHHHhhhcCcHHHHHHHHHhcCC--cccCCCHHHHhc
Confidence 001 11234678899999999999 999999988874
No 304
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.97 E-value=9.5e-30 Score=269.95 Aligned_cols=212 Identities=19% Similarity=0.301 Sum_probs=173.4
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccCC-------CCHHHHHHHHHHHhccCCCCccceeecccc----ceEEEEe
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNNG-------LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE----LKCIVFE 533 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-------~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~----~~~lV~E 533 (808)
.+++|.|+||.||+|.+ ++..||+|.+... .....+.+|+.++++++||||+++++++.+ ..++|||
T Consensus 7 ~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~v~e 86 (264)
T cd06653 7 GKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKLSIFVE 86 (264)
T ss_pred eeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEEEEEEE
Confidence 35678999999999997 6789999987521 112478899999999999999999999854 4789999
Q ss_pred ecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCc
Q 003594 534 YMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 613 (808)
Q Consensus 534 y~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla 613 (808)
|+++++|.+++. ....+++.....|+.||+.||.|||+ .+|+|+||||+||+++.++.++|+|||++
T Consensus 87 ~~~~~~L~~~~~----------~~~~l~~~~~~~~~~~i~~al~~LH~---~~i~H~dl~p~ni~i~~~~~~~l~dfg~~ 153 (264)
T cd06653 87 YMPGGSIKDQLK----------AYGALTENVTRRYTRQILQGVSYLHS---NMIVHRDIKGANILRDSAGNVKLGDFGAS 153 (264)
T ss_pred eCCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEECccccc
Confidence 999999999994 33458899999999999999999999 56999999999999999999999999987
Q ss_pred cc----------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHh-ccCCC
Q 003594 614 IC----------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVL-DGNAG 664 (808)
Q Consensus 614 ~~----------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~l-d~~~~ 664 (808)
.. ..++.++|||||||++|+|++|++||..... ........ .+..+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~ 228 (264)
T cd06653 154 KRIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEA-----MAAIFKIATQPTKP 228 (264)
T ss_pred cccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCH-----HHHHHHHHcCCCCC
Confidence 42 1246789999999999999999999975322 11122222 23445
Q ss_pred CCChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 665 IWPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 665 ~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
..|...++.+.+++.+||. + |..||++.+++.
T Consensus 229 ~~p~~~~~~~~~~i~~~l~-~--~~~r~~~~~~~~ 260 (264)
T cd06653 229 MLPDGVSDACRDFLKQIFV-E--EKRRPTAEFLLR 260 (264)
T ss_pred CCCcccCHHHHHHHHHHhc-C--cccCccHHHHhc
Confidence 5677888999999999999 4 689999887764
No 305
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.97 E-value=1.1e-29 Score=273.81 Aligned_cols=225 Identities=18% Similarity=0.214 Sum_probs=170.3
Q ss_pred cccccccccccCCceEEEEEEE--CCeEEEEEEccCC----CCHHHHHHHHHHHhccC-CCCccceeecccc--c-----
Q 003594 462 DFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNG----LSEEDFQAKVSFLTAVR-HPHLVAVMGCCSE--L----- 527 (808)
Q Consensus 462 ~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~----~~~~~~~~Ei~il~~l~-HpnIv~l~g~~~~--~----- 527 (808)
+|... +.+|.|+||.||+|.+ ++..||||.+... .....+.+|+.+++.++ ||||+++++++.. .
T Consensus 2 ~y~~~-~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 2 AYEKL-EKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CceEe-eEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 34433 4568899999999998 5789999998722 12357889999999995 6999999998854 3
Q ss_pred eEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCC-CccEE
Q 003594 528 KCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDR-NLVAK 606 (808)
Q Consensus 528 ~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~-~~~~k 606 (808)
.|+||||+++ +|.+++..... .....+++..++.++.||+.||.|||+ .+|+||||||+||+++. ++.+|
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~-----~~~~~~~~~~~~~~~~qi~~~L~~LH~---~~i~H~dl~~~nil~~~~~~~~k 151 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGR-----GPGRPLPAKTIKSFMYQLLKGVAHCHK---HGVMHRDLKPQNLLVDKQKGLLK 151 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcc-----cCCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCChHHEEEecCCCeEE
Confidence 6999999985 89998864321 123568999999999999999999999 66999999999999998 89999
Q ss_pred EEeCCCccc--------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhc
Q 003594 607 ISGLGLNIC--------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLD 660 (808)
Q Consensus 607 l~DfGla~~--------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld 660 (808)
|+|||++.. ..++.++||||||+++|+|++|.+||......... ...+..+..
T Consensus 152 l~dfg~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~-~~~~~~~~~ 230 (295)
T cd07837 152 IADLGLGRAFSIPVKSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQL-LHIFKLLGT 230 (295)
T ss_pred EeecccceecCCCccccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHH-HHHHHHhCC
Confidence 999998642 12467899999999999999999998642211000 000000000
Q ss_pred cCC---------------CC--------CChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 661 GNA---------------GI--------WPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 661 ~~~---------------~~--------~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
+.. +. .....+..+.++|.+||..| |..||++.+++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~--P~~R~~~~eil~ 290 (295)
T cd07837 231 PTEQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYD--PAKRISAKAALT 290 (295)
T ss_pred CChhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCC--hhhcCCHHHHhc
Confidence 000 00 01246778999999999999 999999988874
No 306
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.97 E-value=1.2e-29 Score=277.31 Aligned_cols=218 Identities=21% Similarity=0.327 Sum_probs=174.9
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccCC--CC---HHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNNG--LS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPN 537 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~--~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~ 537 (808)
...+|+|+||.||+|.+ ++..||+|.+... .. ...+.+|+.++++++|||+++++++|.+ ..++||||++
T Consensus 30 ~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~- 108 (317)
T cd06635 30 LREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEYCL- 108 (317)
T ss_pred hheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeCCC-
Confidence 34568899999999998 5789999998622 11 2468899999999999999999999865 6889999997
Q ss_pred CCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--
Q 003594 538 GNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-- 615 (808)
Q Consensus 538 gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-- 615 (808)
|+|.+.+.. ....++|..+..++.||+.||.|||+ .+|+||||+|+||+++.++.+||+|||++..
T Consensus 109 g~l~~~~~~---------~~~~l~~~~~~~i~~~i~~~l~~lH~---~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~ 176 (317)
T cd06635 109 GSASDLLEV---------HKKPLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSASIAS 176 (317)
T ss_pred CCHHHHHHH---------hcCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCCcccEEECCCCCEEEecCCCccccC
Confidence 588887742 23568999999999999999999999 5699999999999999999999999998642
Q ss_pred ----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCC-CCChhhHH
Q 003594 616 ----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG-IWPLDLAE 672 (808)
Q Consensus 616 ----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~-~~p~~~~~ 672 (808)
..++.++|||||||++|+|++|++||..... ......+...... ..+...+.
T Consensus 177 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~ 251 (317)
T cd06635 177 PANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-----MSALYHIAQNESPTLQSNEWSD 251 (317)
T ss_pred CcccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccH-----HHHHHHHHhccCCCCCCccccH
Confidence 2356789999999999999999999864321 1222233332222 22335678
Q ss_pred HHHHHHHHhhccCCCcCccccHHhhHHHHHHH
Q 003594 673 ELAGIALKCLSADQDANRDLRIAGVMKELDEV 704 (808)
Q Consensus 673 ~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l 704 (808)
.+.+|+.+||+.+ |..||++.+++..+-.+
T Consensus 252 ~l~~li~~~l~~~--p~~Rpt~~~il~~~~~~ 281 (317)
T cd06635 252 YFRNFVDSCLQKI--PQDRPTSEELLKHMFVL 281 (317)
T ss_pred HHHHHHHHHccCC--cccCcCHHHHHhChhhh
Confidence 8999999999999 99999999998765443
No 307
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.97 E-value=7.1e-30 Score=273.45 Aligned_cols=219 Identities=19% Similarity=0.273 Sum_probs=170.3
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccCC----CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNNG----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNG 538 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~g 538 (808)
.+.+|.|++|.||+|.+ +|..||+|++... .....+.+|+.+++.++||||+++++++.+ ..++||||++ +
T Consensus 4 ~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~~-~ 82 (283)
T cd07835 4 VEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFLD-L 82 (283)
T ss_pred heEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEeccC-c
Confidence 34568899999999998 6899999998722 223578899999999999999999999865 7899999995 7
Q ss_pred CHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc---
Q 003594 539 NLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC--- 615 (808)
Q Consensus 539 sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~--- 615 (808)
+|.+++... ....+++..++.++.|++.||.|||+ .+++||||+|+||+++.++.++|+|||++..
T Consensus 83 ~l~~~~~~~--------~~~~~~~~~~~~~~~~i~~~L~~lH~---~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~ 151 (283)
T cd07835 83 DLKKYMDSS--------PLTGLDPPLIKSYLYQLLQGIAYCHS---HRVLHRDLKPQNLLIDREGALKLADFGLARAFGV 151 (283)
T ss_pred CHHHHHhhC--------CCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeCCCCCHHHEEEcCCCcEEEeecccccccCC
Confidence 999998532 22468999999999999999999999 5699999999999999999999999998742
Q ss_pred -----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhh----------cHHHH---H---
Q 003594 616 -----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMAL----------DQTTL---M--- 656 (808)
Q Consensus 616 -----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~----------~~~~~---~--- 656 (808)
..++.++||||||+++|+|++|++||......... ....+ .
T Consensus 152 ~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (283)
T cd07835 152 PVRTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWPGVTSLP 231 (283)
T ss_pred CccccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhhhhhch
Confidence 12467899999999999999999998542210000 00000 0
Q ss_pred HH---h-c---cCCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 657 QV---L-D---GNAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 657 ~~---l-d---~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
.. . . ..........+..+.+++.+||+.+ |..||++.+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~--P~~Rpt~~~il~ 279 (283)
T cd07835 232 DYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYD--PAKRISAKAALQ 279 (283)
T ss_pred hhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCC--hhhCcCHHHHhc
Confidence 00 0 0 0001112345678999999999999 999999998874
No 308
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.97 E-value=6.3e-30 Score=270.38 Aligned_cols=213 Identities=19% Similarity=0.212 Sum_probs=166.2
Q ss_pred ccccCCceEEEEEEE--CCeEEEEEEccCCC--C---HHHHHHHHHHH-hccCCCCccceeecccc--ceEEEEeecCCC
Q 003594 469 LKCAGDWTNVYRGRL--NHASVAIKTLNNGL--S---EEDFQAKVSFL-TAVRHPHLVAVMGCCSE--LKCIVFEYMPNG 538 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~--~---~~~~~~Ei~il-~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~g 538 (808)
.+|.|+||.||+|.. +|+.||||++.... . ...+..|..++ ...+|||++++++++.+ ..|+||||++++
T Consensus 3 ~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~ 82 (260)
T cd05611 3 PISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNGG 82 (260)
T ss_pred cCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCCC
Confidence 468899999999998 57899999986321 1 12344555444 45589999999999865 789999999999
Q ss_pred CHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc---
Q 003594 539 NLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC--- 615 (808)
Q Consensus 539 sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~--- 615 (808)
+|.+++. ....+++..+..|+.||+.||.|||+ .+|+||||+|+||+++.++.+||+|||++..
T Consensus 83 ~L~~~l~----------~~~~~~~~~~~~i~~qi~~aL~~lH~---~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~ 149 (260)
T cd05611 83 DCASLIK----------TLGGLPEDWAKQYIAEVVLGVEDLHQ---RGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE 149 (260)
T ss_pred CHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCcEEEeecccceeccc
Confidence 9999994 33568999999999999999999999 5699999999999999999999999998743
Q ss_pred ------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccC---CCCCChhhHHHH
Q 003594 616 ------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGN---AGIWPLDLAEEL 674 (808)
Q Consensus 616 ------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~---~~~~p~~~~~~l 674 (808)
..++.++||||||+++|+|++|.+||..... ...+..+.... ....+..++..+
T Consensus 150 ~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (260)
T cd05611 150 NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETP-----DAVFDNILSRRINWPEEVKEFCSPEA 224 (260)
T ss_pred cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHhcccCCCCcccccCCHHH
Confidence 2257789999999999999999999964321 11112221111 112223567899
Q ss_pred HHHHHHhhccCCCcCccccHHhhHHHH
Q 003594 675 AGIALKCLSADQDANRDLRIAGVMKEL 701 (808)
Q Consensus 675 ~~Li~~Cl~~dp~p~~Rps~~evl~~L 701 (808)
.+++.+||..+ |..||++.++.+.|
T Consensus 225 ~~~i~~~l~~~--p~~R~~~~~~~~~l 249 (260)
T cd05611 225 VDLINRLLCMD--PAKRLGANGYQEIK 249 (260)
T ss_pred HHHHHHHccCC--HHHccCCCcHHHHH
Confidence 99999999999 99999876554433
No 309
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.97 E-value=6e-30 Score=276.37 Aligned_cols=218 Identities=18% Similarity=0.270 Sum_probs=174.2
Q ss_pred ccccccccccccCCceEEEEEEE--CCeEEEEEEccC--CCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEee
Q 003594 461 EDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN--GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEY 534 (808)
Q Consensus 461 ~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~--~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey 534 (808)
++|... +.+|.|+||.||+|.. ++..||+|.+.. ....+.+.+|+.++++++||||++++++|.. ..|+|+||
T Consensus 19 ~~~~~~-~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~ 97 (293)
T cd06647 19 KKYTRF-EKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEY 97 (293)
T ss_pred hhceee-eEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEec
Confidence 344333 4568899999999987 678999999862 2334678999999999999999999999854 78999999
Q ss_pred cCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCcc
Q 003594 535 MPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNI 614 (808)
Q Consensus 535 ~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~ 614 (808)
+++++|.+++.. ..+++..+..++.|++.||.|||+ .+++||||||+||+++.++.+||+|||++.
T Consensus 98 ~~~~~L~~~~~~-----------~~l~~~~~~~i~~~l~~al~~LH~---~gi~H~dL~p~Nili~~~~~~kL~dfg~~~ 163 (293)
T cd06647 98 LAGGSLTDVVTE-----------TCMDEGQIAAVCRECLQALEFLHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCA 163 (293)
T ss_pred CCCCcHHHHHhh-----------cCCCHHHHHHHHHHHHHHHHHHHh---CCEeeccCCHHHEEEcCCCCEEEccCccee
Confidence 999999999842 347899999999999999999999 569999999999999999999999999763
Q ss_pred c-------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCC--CCC
Q 003594 615 C-------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG--IWP 667 (808)
Q Consensus 615 ~-------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~--~~p 667 (808)
. ..++.++||||||+++|+|++|++||...... ..+..+.....+ ..+
T Consensus 164 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~-----~~~~~~~~~~~~~~~~~ 238 (293)
T cd06647 164 QITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL-----RALYLIATNGTPELQNP 238 (293)
T ss_pred cccccccccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChh-----hheeehhcCCCCCCCCc
Confidence 2 23567899999999999999999999753211 111111111111 123
Q ss_pred hhhHHHHHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 668 LDLAEELAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 668 ~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
...+..+.+++.+||..+ |..||++.+++..
T Consensus 239 ~~~~~~l~~li~~~l~~~--p~~Rp~~~~il~h 269 (293)
T cd06647 239 EKLSAIFRDFLNRCLEMD--VEKRGSAKELLQH 269 (293)
T ss_pred cccCHHHHHHHHHHccCC--hhhCcCHHHHhcC
Confidence 346778999999999999 8999999998854
No 310
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=4.6e-31 Score=309.74 Aligned_cols=212 Identities=22% Similarity=0.311 Sum_probs=179.6
Q ss_pred ccccCCceEEEEEEE--CCeEEEEEEccC----CCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCH
Q 003594 469 LKCAGDWTNVYRGRL--NHASVAIKTLNN----GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNL 540 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~--~~~~vAiK~l~~----~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL 540 (808)
.||+|.||.||.|.. +|...|+|-++- ....+.+.+|+.+|..|+|||+|++||+-.. ..+|.||||.+|+|
T Consensus 1242 ~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IFMEyC~~GsL 1321 (1509)
T KOG4645|consen 1242 FIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIFMEYCEGGSL 1321 (1509)
T ss_pred ccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHHHHHhccCcH
Confidence 457899999999997 789999999872 2223568899999999999999999998754 78999999999999
Q ss_pred HHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-----
Q 003594 541 RDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC----- 615 (808)
Q Consensus 541 ~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~----- 615 (808)
.+.+. .....++.....+..|++.||+|||++ |||||||||.||||+.+|.+|++|||.|..
T Consensus 1322 a~ll~----------~gri~dE~vt~vyt~qll~gla~LH~~---gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~ 1388 (1509)
T KOG4645|consen 1322 ASLLE----------HGRIEDEMVTRVYTKQLLEGLAYLHEH---GIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNA 1388 (1509)
T ss_pred HHHHH----------hcchhhhhHHHHHHHHHHHHHHHHHhc---CceecCCCccceeeecCCcEEeecccceeEecCch
Confidence 99994 445677888888999999999999995 599999999999999999999999999853
Q ss_pred ---------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCCh
Q 003594 616 ---------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPL 668 (808)
Q Consensus 616 ---------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~ 668 (808)
.+..-+.||||+|||++||+||+.||...+ .+-..+..+-.+..+.+|.
T Consensus 1389 ~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~d----ne~aIMy~V~~gh~Pq~P~ 1464 (1509)
T KOG4645|consen 1389 QTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELD----NEWAIMYHVAAGHKPQIPE 1464 (1509)
T ss_pred hcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhcc----chhHHHhHHhccCCCCCch
Confidence 234567899999999999999999987543 2233455566678888999
Q ss_pred hhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 669 DLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 669 ~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
..+.+-.+++.+||+.| |..|.++.|+++
T Consensus 1465 ~ls~~g~dFle~Cl~~d--P~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1465 RLSSEGRDFLEHCLEQD--PKMRWTASQLLE 1493 (1509)
T ss_pred hhhHhHHHHHHHHHhcC--chhhhHHHHHHH
Confidence 99999999999999999 889988776654
No 311
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.97 E-value=1e-29 Score=273.55 Aligned_cols=210 Identities=20% Similarity=0.272 Sum_probs=169.1
Q ss_pred ccccccCCceEEEEEEE-----CCeEEEEEEccCC------CCHHHHHHHHHHHhcc-CCCCccceeecccc--ceEEEE
Q 003594 467 FRLKCAGDWTNVYRGRL-----NHASVAIKTLNNG------LSEEDFQAKVSFLTAV-RHPHLVAVMGCCSE--LKCIVF 532 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~-----~~~~vAiK~l~~~------~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~~~lV~ 532 (808)
.+.+|.|+||.||++.. +|..||+|++... ...+.+.+|+.++.++ +||||+++++++.. ..++||
T Consensus 5 ~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~ 84 (290)
T cd05613 5 LKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKLHLIL 84 (290)
T ss_pred eeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeEEEEE
Confidence 35678999999999986 5789999998731 1236688899999999 59999999988865 678999
Q ss_pred eecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCC
Q 003594 533 EYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 612 (808)
Q Consensus 533 Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGl 612 (808)
||+++++|.+++. ....+++..+..++.||+.||.|||+ .+++||||+|+|||++.++.+||+|||+
T Consensus 85 e~~~~~~L~~~l~----------~~~~l~~~~~~~~~~qi~~al~~lH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~ 151 (290)
T cd05613 85 DYINGGELFTHLS----------QRERFKEQEVQIYSGEIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGL 151 (290)
T ss_pred ecCCCCcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeEECCCCCEEEeeCcc
Confidence 9999999999994 34568899999999999999999999 6699999999999999999999999998
Q ss_pred ccc----------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCC
Q 003594 613 NIC----------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 664 (808)
Q Consensus 613 a~~----------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~ 664 (808)
+.. ..++.++||||||+++|+|++|..||...... .....+...+.....
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~--~~~~~~~~~~~~~~~ 229 (290)
T cd05613 152 SKEFHEDEVERAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEK--NSQAEISRRILKSEP 229 (290)
T ss_pred ceecccccccccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcc--ccHHHHHHHhhccCC
Confidence 743 12457899999999999999999998642111 111112222222334
Q ss_pred CCChhhHHHHHHHHHHhhccCCCcCcccc
Q 003594 665 IWPLDLAEELAGIALKCLSADQDANRDLR 693 (808)
Q Consensus 665 ~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps 693 (808)
.+|..++..+.+++.+||..| |..||+
T Consensus 230 ~~~~~~~~~~~~ll~~~l~~~--p~~R~~ 256 (290)
T cd05613 230 PYPQEMSALAKDIIQRLLMKD--PKKRLG 256 (290)
T ss_pred CCCccCCHHHHHHHHHHhcCC--HHHhcC
Confidence 566678889999999999999 889973
No 312
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.97 E-value=1e-29 Score=274.65 Aligned_cols=211 Identities=18% Similarity=0.189 Sum_probs=170.8
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccC--CCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCHH
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNN--GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNLR 541 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~--~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL~ 541 (808)
..+|.|+||.||++.. ++..||||.+.. ......+.+|+.+++.++||||+++++++.. ..++||||+++++|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence 5578999999999988 679999999863 2234578899999999999999999998854 889999999999999
Q ss_pred HHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc------
Q 003594 542 DKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC------ 615 (808)
Q Consensus 542 ~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~------ 615 (808)
+++. ...+++.....++.|++.||.|||+ .+++||||+|+||+++.++.++|+|||++..
T Consensus 106 ~~~~-----------~~~~~~~~~~~~~~ql~~~l~~lH~---~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~ 171 (292)
T cd06657 106 DIVT-----------HTRMNEEQIAAVCLAVLKALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP 171 (292)
T ss_pred HHHh-----------cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEECCCCCEEEcccccceecccccc
Confidence 9873 2358999999999999999999999 5699999999999999999999999997632
Q ss_pred -------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccC--CCCCChhhHHHH
Q 003594 616 -------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGN--AGIWPLDLAEEL 674 (808)
Q Consensus 616 -------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~--~~~~p~~~~~~l 674 (808)
..++.++||||||+++|+|++|.+||...... .....+.... .......++..+
T Consensus 172 ~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~l 246 (292)
T cd06657 172 RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL-----KAMKMIRDNLPPKLKNLHKVSPSL 246 (292)
T ss_pred cccccccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHhhCCcccCCcccCCHHH
Confidence 23477899999999999999999998642211 1111111111 111123467789
Q ss_pred HHHHHHhhccCCCcCccccHHhhHH
Q 003594 675 AGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 675 ~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
.+++.+||..+ |..||++.+++.
T Consensus 247 ~~li~~~l~~~--P~~R~~~~~ll~ 269 (292)
T cd06657 247 KGFLDRLLVRD--PAQRATAAELLK 269 (292)
T ss_pred HHHHHHHHhCC--cccCcCHHHHhc
Confidence 99999999999 999999998876
No 313
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=99.97 E-value=9.7e-30 Score=272.74 Aligned_cols=217 Identities=19% Similarity=0.253 Sum_probs=169.0
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccC----CCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCC
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNN----GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGN 539 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~----~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gs 539 (808)
+.+|.|+||.||+|.+ ++..||||.++. ....+.+.+|++++++++||||+++++++.+ ..++||||++++.
T Consensus 7 ~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~~~~~~ 86 (288)
T cd07833 7 GVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFEYVERTL 86 (288)
T ss_pred EEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEecCCCCH
Confidence 4568899999999998 578999999872 2224678999999999999999999999865 6899999999877
Q ss_pred HHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc----
Q 003594 540 LRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC---- 615 (808)
Q Consensus 540 L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~---- 615 (808)
|..++ .....+++..+..++.||+.||.|||+ .+++||||+|+||+++.++.+||+|||++..
T Consensus 87 l~~~~----------~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~ 153 (288)
T cd07833 87 LELLE----------ASPGGLPPDAVRSYIWQLLQAIAYCHS---HNIIHRDIKPENILVSESGVLKLCDFGFARALRAR 153 (288)
T ss_pred HHHHH----------hcCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCCEEEEeeecccccCCC
Confidence 76655 234558999999999999999999999 5699999999999999999999999998642
Q ss_pred ----------------------C-CCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcH---------HHHHHHhc--c
Q 003594 616 ----------------------D-QLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQ---------TTLMQVLD--G 661 (808)
Q Consensus 616 ----------------------~-~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~---------~~~~~~ld--~ 661 (808)
. .++.++||||||+++|+|++|++||........... ........ +
T Consensus 154 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (288)
T cd07833 154 PASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSNP 233 (288)
T ss_pred ccccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccCc
Confidence 1 456789999999999999999999863211000000 00000000 0
Q ss_pred ----------C-----CCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 662 ----------N-----AGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 662 ----------~-----~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
. ...++..++.++.+|+.+||..+ |..||++.+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~--p~~Rps~~~il~ 284 (288)
T cd07833 234 RFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMD--PKERLTCDELLQ 284 (288)
T ss_pred cccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccC--chhcccHHHHhc
Confidence 0 00123345788999999999999 999999998874
No 314
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.97 E-value=1.2e-30 Score=264.97 Aligned_cols=224 Identities=22% Similarity=0.313 Sum_probs=184.3
Q ss_pred HhhccccccccccccCCceEEEEEEE--CCeEEEEEEccCCCCHHHHHHHHHHHhcc-CCCCccceeecccc------ce
Q 003594 458 LATEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNGLSEEDFQAKVSFLTAV-RHPHLVAVMGCCSE------LK 528 (808)
Q Consensus 458 ~at~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~------~~ 528 (808)
..|++|..+..++|-|-.|.|-.+.. ++..+|+|++.+. ....+|+++.-.. .|||||.++++|.+ .+
T Consensus 58 ~itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds---~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkcL 134 (400)
T KOG0604|consen 58 SITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS---PKARREVELHWMASGHPHIVSIIDVYENSYQGRKCL 134 (400)
T ss_pred cchhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC---HHHHhHhhhhhhhcCCCceEEeehhhhhhccCceee
Confidence 35788888889999999999999988 6899999999732 4567888876555 69999999999966 45
Q ss_pred EEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccC---CCccE
Q 003594 529 CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLD---RNLVA 605 (808)
Q Consensus 529 ~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld---~~~~~ 605 (808)
.+|||+|+||.|...+..+ ....+++.++..|+.||+.|+.|||+ .+|.||||||+|+|.. .|..+
T Consensus 135 LiVmE~meGGeLfsriq~~--------g~~afTErea~eI~~qI~~Av~~lH~---~nIAHRDlKpENLLyt~t~~na~l 203 (400)
T KOG0604|consen 135 LIVMECMEGGELFSRIQDR--------GDQAFTEREASEIMKQIGLAVRYLHS---MNIAHRDLKPENLLYTTTSPNAPL 203 (400)
T ss_pred EeeeecccchHHHHHHHHc--------ccccchHHHHHHHHHHHHHHHHHHHh---cchhhccCChhheeeecCCCCcce
Confidence 7899999999999999654 45679999999999999999999999 6699999999999996 45689
Q ss_pred EEEeCCCccc------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhcc
Q 003594 606 KISGLGLNIC------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDG 661 (808)
Q Consensus 606 kl~DfGla~~------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~ 661 (808)
||+|||+|+. ..|+..+|+||+||++|-|++|.|||..... ..+..+....+..+
T Consensus 204 KLtDfGFAK~t~~~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg-~aispgMk~rI~~g 282 (400)
T KOG0604|consen 204 KLTDFGFAKETQEPGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHG-LAISPGMKRRIRTG 282 (400)
T ss_pred EecccccccccCCCccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCC-ccCChhHHhHhhcc
Confidence 9999999974 3478889999999999999999999976433 12333333334333
Q ss_pred CCCCCC----hhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 662 NAGIWP----LDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 662 ~~~~~p----~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
. ..+| ..+++...++|..+|..+ |.+|.|+.+++.
T Consensus 283 q-y~FP~pEWs~VSe~aKdlIR~LLkt~--PteRlTI~~~m~ 321 (400)
T KOG0604|consen 283 Q-YEFPEPEWSCVSEAAKDLIRKLLKTE--PTERLTIEEVMD 321 (400)
T ss_pred C-ccCCChhHhHHHHHHHHHHHHHhcCC--chhheeHHHhhc
Confidence 1 2222 267899999999999999 999999888764
No 315
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.97 E-value=1.5e-29 Score=265.92 Aligned_cols=216 Identities=23% Similarity=0.323 Sum_probs=177.4
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCC----CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCC
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNG----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGN 539 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gs 539 (808)
..+|.|+||.||++.. ++..+|+|.+... .....+.+|+.+++.++||||+++++++.+ ..++||||+++++
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~ 85 (256)
T cd08530 6 KKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEYAPFGD 85 (256)
T ss_pred eeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehhcCCCC
Confidence 4467899999999987 6789999998732 223567889999999999999999998865 7899999999999
Q ss_pred HHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc----
Q 003594 540 LRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC---- 615 (808)
Q Consensus 540 L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~---- 615 (808)
|.+++.... .....+++..++.++.|++.||.|||+ .+++|+||+|+||+++.++.+||+|||++..
T Consensus 86 L~~~~~~~~------~~~~~~~~~~~~~~~~~l~~al~~lh~---~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~ 156 (256)
T cd08530 86 LSKAISKRK------KKRKLIPEQEIWRIFIQLLRGLQALHE---QKILHRDLKSANILLVANDLVKIGDLGISKVLKKN 156 (256)
T ss_pred HHHHHHHHH------hhcCCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCcceEEEecCCcEEEeeccchhhhccC
Confidence 999986532 234678999999999999999999999 5699999999999999999999999998743
Q ss_pred -------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHHHHH
Q 003594 616 -------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAG 676 (808)
Q Consensus 616 -------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~ 676 (808)
..++.++|+||||+++|+|++|++||..... ......+.....+..+...+.++.+
T Consensus 157 ~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (256)
T cd08530 157 MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSM-----QDLRYKVQRGKYPPIPPIYSQDLQN 231 (256)
T ss_pred CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHhcCCCCCCchhhCHHHHH
Confidence 2346789999999999999999999865321 1112223333444555678889999
Q ss_pred HHHHhhccCCCcCccccHHhhHH
Q 003594 677 IALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 677 Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
++.+||..+ |..||++.+++.
T Consensus 232 li~~~l~~~--p~~Rp~~~~~l~ 252 (256)
T cd08530 232 FIRSMLQVK--PKLRPNCDKILA 252 (256)
T ss_pred HHHHHcCCC--cccCCCHHHHhc
Confidence 999999999 999999998875
No 316
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.97 E-value=4.3e-30 Score=287.58 Aligned_cols=227 Identities=22% Similarity=0.288 Sum_probs=172.6
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccC---CCCHHHHHHHHHHHhccCCCCccceeecccc--------ceEEEEe
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNN---GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--------LKCIVFE 533 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~---~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--------~~~lV~E 533 (808)
...+|+|+||.||+|+. +|+.||||.++. ....+...+|+++|++++|||||+++++-.+ ...+|||
T Consensus 18 ~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vlvmE 97 (732)
T KOG4250|consen 18 DERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVLVME 97 (732)
T ss_pred hhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceEEEe
Confidence 35678999999999997 799999999984 3446789999999999999999999988644 4589999
Q ss_pred ecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccC----CCccEEEEe
Q 003594 534 YMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLD----RNLVAKISG 609 (808)
Q Consensus 534 y~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld----~~~~~kl~D 609 (808)
||+||||+.+|... .+...|++...+.++.+++.||.|||.++ |+||||||.||++- ..-..||+|
T Consensus 98 yC~gGsL~~~L~~P-------EN~~GLpE~e~l~lL~d~~~al~~LrEn~---IvHRDlKP~NIvl~~Gedgq~IyKLtD 167 (732)
T KOG4250|consen 98 YCSGGSLRKVLNSP-------ENAYGLPESEFLDLLSDLVSALRHLRENG---IVHRDLKPGNIVLQIGEDGQSIYKLTD 167 (732)
T ss_pred ecCCCcHHHHhcCc-------ccccCCCHHHHHHHHHHHHHHHHHHHHcC---ceeccCCCCcEEEeecCCCceEEeeec
Confidence 99999999999655 46678999999999999999999999955 99999999999993 334789999
Q ss_pred CCCccc-------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhcc---
Q 003594 610 LGLNIC-------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDG--- 661 (808)
Q Consensus 610 fGla~~-------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~--- 661 (808)
||.|+. ..|+..+|.|||||++|+++||..||-............+..+...
T Consensus 168 fG~Arel~d~s~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~~ 247 (732)
T KOG4250|consen 168 FGAARELDDNSLFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPSG 247 (732)
T ss_pred ccccccCCCCCeeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCCc
Confidence 999974 3478889999999999999999999854221100000111111100
Q ss_pred ----------------CCCCCCh----hhHHHHHHHHHHhhccCCCcCccc--cHHhhHHHHHHHH
Q 003594 662 ----------------NAGIWPL----DLAEELAGIALKCLSADQDANRDL--RIAGVMKELDEVR 705 (808)
Q Consensus 662 ----------------~~~~~p~----~~~~~l~~Li~~Cl~~dp~p~~Rp--s~~evl~~L~~l~ 705 (808)
...++|. .....+-..+..+|..+ |+.|- ...+....+..|.
T Consensus 248 v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~--~~~~~~~~~~~~Fa~~~dIL 311 (732)
T KOG4250|consen 248 VAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWN--PRKRGHEGFDRFFAEVDDIL 311 (732)
T ss_pred eeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhh--HHHhCCCCcchHHHHHHHHH
Confidence 0012222 23345666777778888 77887 5566666665554
No 317
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.97 E-value=1.6e-29 Score=269.34 Aligned_cols=225 Identities=17% Similarity=0.207 Sum_probs=168.9
Q ss_pred HHHHhhccccccccc-cccCCceEEEEEEE--CCeEEEEEEccCCCCHHHHHHHHHHHhcc-CCCCccceeecccc--ce
Q 003594 455 DIRLATEDFSERFRL-KCAGDWTNVYRGRL--NHASVAIKTLNNGLSEEDFQAKVSFLTAV-RHPHLVAVMGCCSE--LK 528 (808)
Q Consensus 455 ei~~at~~f~~~~~i-~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~~ 528 (808)
++....++|.....+ +|.|+||.||++.. ++..+|+|.+...... . .|+.+...+ +||||++++++|.. ..
T Consensus 8 ~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~-~--~e~~~~~~~~~h~~iv~~~~~~~~~~~~ 84 (267)
T PHA03390 8 ELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFN-A--IEPMVHQLMKDNPNFIKLYYSVTTLKGH 84 (267)
T ss_pred HHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcc-h--hhHHHHHHhhcCCCEEEEEEEEecCCee
Confidence 333334444433333 58899999999997 6789999998732111 1 122222222 79999999999854 78
Q ss_pred EEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCc-cEEE
Q 003594 529 CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNL-VAKI 607 (808)
Q Consensus 529 ~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~-~~kl 607 (808)
++||||+++|+|.+++. ....++|..+..++.||+.||.|||+ .+++||||||+||+++.++ .++|
T Consensus 85 ~iv~e~~~~~~L~~~l~----------~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~~~l 151 (267)
T PHA03390 85 VLIMDYIKDGDLFDLLK----------KEGKLSEAEVKKIIRQLVEALNDLHK---HNIIHNDIKLENVLYDRAKDRIYL 151 (267)
T ss_pred EEEEEcCCCCcHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEEeCCCCeEEE
Confidence 99999999999999994 33479999999999999999999999 5699999999999999998 9999
Q ss_pred EeCCCccc---------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCC
Q 003594 608 SGLGLNIC---------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIW 666 (808)
Q Consensus 608 ~DfGla~~---------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~ 666 (808)
+|||++.. ..++.++||||||+++|+|++|+.||....... .....+.... ......
T Consensus 152 ~dfg~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~-~~~~~~~~~~-~~~~~~ 229 (267)
T PHA03390 152 CDYGLCKIIGTPSCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEE-LDLESLLKRQ-QKKLPF 229 (267)
T ss_pred ecCccceecCCCccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcch-hhHHHHHHhh-cccCCc
Confidence 99998742 346788999999999999999999997432110 1111122222 222234
Q ss_pred ChhhHHHHHHHHHHhhccCCCcCcccc-HHhhHH
Q 003594 667 PLDLAEELAGIALKCLSADQDANRDLR-IAGVMK 699 (808)
Q Consensus 667 p~~~~~~l~~Li~~Cl~~dp~p~~Rps-~~evl~ 699 (808)
+...+..+.+++.+||+.+ |..||+ +.++++
T Consensus 230 ~~~~~~~~~~li~~~l~~~--p~~R~~~~~~~l~ 261 (267)
T PHA03390 230 IKNVSKNANDFVQSMLKYN--INYRLTNYNEIIK 261 (267)
T ss_pred ccccCHHHHHHHHHHhccC--hhhCCchHHHHhc
Confidence 4468899999999999999 999996 577763
No 318
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=99.97 E-value=2.7e-29 Score=262.32 Aligned_cols=213 Identities=23% Similarity=0.369 Sum_probs=174.3
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCCC--CHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCHH
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNGL--SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNLR 541 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~--~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL~ 541 (808)
..+|.|+||.||++.+ ++..|++|++.... ....+.+|+.++++++||||+++++++.. ..++++||+++++|.
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~ 85 (253)
T cd05122 6 EKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCSGGSLK 85 (253)
T ss_pred eeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCCCCcHH
Confidence 4567899999999998 47899999998443 45789999999999999999999999854 789999999999999
Q ss_pred HHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc------
Q 003594 542 DKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC------ 615 (808)
Q Consensus 542 ~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~------ 615 (808)
+++... ...+++..+..++.+++.||.|||. .+++||||+|+||+++.++.++|+|||.+..
T Consensus 86 ~~~~~~---------~~~~~~~~~~~i~~~i~~~l~~lh~---~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 153 (253)
T cd05122 86 DLLKST---------NQTLTESQIAYVCKELLKGLEYLHS---NGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA 153 (253)
T ss_pred HHHhhc---------CCCCCHHHHHHHHHHHHHHHHHhhc---CCEecCCCCHHHEEEccCCeEEEeecccccccccccc
Confidence 999532 2578999999999999999999999 5699999999999999999999999998743
Q ss_pred ------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCC--CChhhHHHHH
Q 003594 616 ------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGI--WPLDLAEELA 675 (808)
Q Consensus 616 ------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~--~p~~~~~~l~ 675 (808)
..++.++||||||+++|+|++|++||...... ............. .+..++..+.
T Consensus 154 ~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (253)
T cd05122 154 RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPM-----KALFKIATNGPPGLRNPEKWSDEFK 228 (253)
T ss_pred ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchH-----HHHHHHHhcCCCCcCcccccCHHHH
Confidence 12467899999999999999999998753211 1111111111122 2223478899
Q ss_pred HHHHHhhccCCCcCccccHHhhHH
Q 003594 676 GIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 676 ~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
+++.+||..| |..||++.+++.
T Consensus 229 ~~i~~~l~~~--p~~R~t~~~~l~ 250 (253)
T cd05122 229 DFLKKCLQKN--PEKRPTAEQLLK 250 (253)
T ss_pred HHHHHHccCC--hhhCCCHHHHhc
Confidence 9999999999 999999999875
No 319
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=99.97 E-value=2.1e-29 Score=264.27 Aligned_cols=212 Identities=23% Similarity=0.367 Sum_probs=177.2
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCCC----CHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCC
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNGL----SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGN 539 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~----~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gs 539 (808)
+.+|.|+||.||++.. ++..|++|.+.... ....+.+|++++++++|||++++++++.+ ..++||||+++++
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~ 85 (254)
T cd06627 6 DLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEYAENGS 85 (254)
T ss_pred eEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEecCCCCc
Confidence 5668899999999988 57899999998332 34678999999999999999999998865 6889999999999
Q ss_pred HHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc----
Q 003594 540 LRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC---- 615 (808)
Q Consensus 540 L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~---- 615 (808)
|.+++. ....+++..+..++.|++.||.|||+ .+|+||||+|+||+++.++.++|+|||++..
T Consensus 86 L~~~~~----------~~~~l~~~~~~~~~~~i~~~l~~lH~---~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~ 152 (254)
T cd06627 86 LRQIIK----------KFGPFPESLVAVYVYQVLQGLAYLHE---QGVIHRDIKAANILTTKDGVVKLADFGVATKLNDV 152 (254)
T ss_pred HHHHHH----------hccCCCHHHHHHHHHHHHHHHHHHhh---CCcccCCCCHHHEEECCCCCEEEeccccceecCCC
Confidence 999993 34679999999999999999999999 5699999999999999999999999998753
Q ss_pred ---------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHHH
Q 003594 616 ---------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEEL 674 (808)
Q Consensus 616 ---------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l 674 (808)
..++.++||||||+++|+|++|.+||..... ...............+...+..+
T Consensus 153 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 227 (254)
T cd06627 153 SKDDASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP-----MAALFRIVQDDHPPLPEGISPEL 227 (254)
T ss_pred cccccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH-----HHHHHHHhccCCCCCCCCCCHHH
Confidence 1246789999999999999999999864322 11222222334445666778999
Q ss_pred HHHHHHhhccCCCcCccccHHhhHH
Q 003594 675 AGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 675 ~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
.+++.+||..+ |..||++.+++.
T Consensus 228 ~~~i~~~l~~~--p~~R~~~~~~l~ 250 (254)
T cd06627 228 KDFLMQCFQKD--PNLRPTAKQLLK 250 (254)
T ss_pred HHHHHHHHhCC--hhhCcCHHHHhc
Confidence 99999999999 999999998874
No 320
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=99.97 E-value=2.6e-29 Score=263.82 Aligned_cols=216 Identities=24% Similarity=0.386 Sum_probs=180.0
Q ss_pred cccccCCceEEEEEEEC--CeEEEEEEccCC----CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCC
Q 003594 468 RLKCAGDWTNVYRGRLN--HASVAIKTLNNG----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGN 539 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~~--~~~vAiK~l~~~----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gs 539 (808)
+.+|.|+||.||++.+. +..||+|++... .....+.+|+++++.++|||++++++.+.. ..++|+||+++++
T Consensus 6 ~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~~~~~~ 85 (258)
T cd08215 6 KQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEYADGGD 85 (258)
T ss_pred eeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEecCCCc
Confidence 45678999999999994 899999999732 234678899999999999999999998855 7889999999999
Q ss_pred HHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc----
Q 003594 540 LRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC---- 615 (808)
Q Consensus 540 L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~---- 615 (808)
|.+++.... .....+++..+..|+.+++.||.|||+ .+++|+||+|+||+++.++.++|+|||++..
T Consensus 86 L~~~l~~~~------~~~~~~~~~~~~~i~~~i~~~l~~lh~---~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~ 156 (258)
T cd08215 86 LSQKIKKQK------KEGKPFPEEQILDWFVQLCLALKYLHS---RKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSST 156 (258)
T ss_pred HHHHHHHhh------ccCCCcCHHHHHHHHHHHHHHHHHHHh---CCEecccCChHHeEEcCCCcEEECCccceeecccC
Confidence 999996431 124679999999999999999999999 5699999999999999999999999998743
Q ss_pred ---------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHHH
Q 003594 616 ---------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEEL 674 (808)
Q Consensus 616 ---------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l 674 (808)
..++.++||||||+++|+|++|..||..... ...............|...+..+
T Consensus 157 ~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 231 (258)
T cd08215 157 VDLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENL-----LELALKILKGQYPPIPSQYSSEL 231 (258)
T ss_pred cceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcH-----HHHHHHHhcCCCCCCCCCCCHHH
Confidence 2356789999999999999999999865321 12222333444455566788999
Q ss_pred HHHHHHhhccCCCcCccccHHhhHH
Q 003594 675 AGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 675 ~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
.+++.+||..+ |..||++.+++.
T Consensus 232 ~~~i~~~l~~~--p~~Rp~~~~ll~ 254 (258)
T cd08215 232 RNLVSSLLQKD--PEERPSIAQILQ 254 (258)
T ss_pred HHHHHHHcCCC--hhhCcCHHHHhc
Confidence 99999999999 999999999875
No 321
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.97 E-value=1.7e-29 Score=265.00 Aligned_cols=213 Identities=23% Similarity=0.345 Sum_probs=177.5
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCCC----CHHHHHHHHHHHhccCCCCccceeecccc----ceEEEEeecCC
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNGL----SEEDFQAKVSFLTAVRHPHLVAVMGCCSE----LKCIVFEYMPN 537 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~----~~~~~~~Ei~il~~l~HpnIv~l~g~~~~----~~~lV~Ey~~~ 537 (808)
+.+|+|+||.||+|.. ++..|++|++.... ..+.+.+|+.++++++||||+++++.+.+ ..++||||+++
T Consensus 6 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~~ 85 (260)
T cd06606 6 ELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFLEYVSG 85 (260)
T ss_pred eEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEEEecCC
Confidence 5568899999999998 48999999987433 35778999999999999999999999854 57899999999
Q ss_pred CCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--
Q 003594 538 GNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-- 615 (808)
Q Consensus 538 gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-- 615 (808)
++|.+++. ....+++..+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||.+..
T Consensus 86 ~~L~~~~~----------~~~~~~~~~~~~~~~~l~~~l~~lh~---~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~ 152 (260)
T cd06606 86 GSLSSLLK----------KFGKLPEPVIRKYTRQILEGLAYLHS---NGIVHRDIKGANILVDSDGVVKLADFGCAKRLG 152 (260)
T ss_pred CcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHH---CCccccCCCHHHEEEcCCCCEEEcccccEEecc
Confidence 99999994 33489999999999999999999999 5699999999999999999999999998643
Q ss_pred -------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhc-cCCCCCChh
Q 003594 616 -------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLD-GNAGIWPLD 669 (808)
Q Consensus 616 -------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld-~~~~~~p~~ 669 (808)
...+.++||||||+++|+|++|..||..... .......+.. ......|..
T Consensus 153 ~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~ 228 (260)
T cd06606 153 DIETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN----PMAALYKIGSSGEPPEIPEH 228 (260)
T ss_pred cccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc----hHHHHHhccccCCCcCCCcc
Confidence 1256789999999999999999999875321 1112222222 234456667
Q ss_pred hHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 670 LAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 670 ~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
.+..+.+++.+||+.+ |..||++.+++.
T Consensus 229 ~~~~l~~~i~~~l~~~--p~~Rp~~~~ll~ 256 (260)
T cd06606 229 LSEEAKDFLRKCLRRD--PKKRPTADELLQ 256 (260)
T ss_pred cCHHHHHHHHHhCcCC--hhhCCCHHHHhh
Confidence 7899999999999999 999999999875
No 322
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.97 E-value=1.1e-29 Score=276.38 Aligned_cols=216 Identities=20% Similarity=0.222 Sum_probs=168.0
Q ss_pred ccCCceEEEEEEECCeEEEEEEccCC----CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCHHHHH
Q 003594 471 CAGDWTNVYRGRLNHASVAIKTLNNG----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNLRDKL 544 (808)
Q Consensus 471 g~G~~g~Vy~~~~~~~~vAiK~l~~~----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL~~~l 544 (808)
|+|+++.||++..++..||||++... .....+.+|+.+++.++||||+++++++.+ ..+++|||+++|+|.+++
T Consensus 11 ~~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~~l 90 (314)
T cd08216 11 EDLMIVHLAKHKPTNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGSCEDLL 90 (314)
T ss_pred cCCceEEEEEecCCCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCCHHHHH
Confidence 45566777777778999999998732 233679999999999999999999999865 789999999999999999
Q ss_pred hhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc---------
Q 003594 545 FTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC--------- 615 (808)
Q Consensus 545 ~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~--------- 615 (808)
... ....+++.....++.|++.||.|||+ .+|+||||||+|||++.++.+||+|||.+..
T Consensus 91 ~~~--------~~~~~~~~~~~~~~~~l~~~L~~LH~---~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~ 159 (314)
T cd08216 91 KTH--------FPEGLPELAIAFILKDVLNALDYIHS---KGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQR 159 (314)
T ss_pred HHh--------cccCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCcceEEEecCCceEEecCccceeecccccccc
Confidence 643 23458899999999999999999999 5699999999999999999999999997631
Q ss_pred -------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHH---HHHHHhc-------
Q 003594 616 -------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQT---TLMQVLD------- 660 (808)
Q Consensus 616 -------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~---~~~~~ld------- 660 (808)
..++.++|||||||++|+|++|.+||............ .....++
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (314)
T cd08216 160 VVHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEKVRGTVPCLLDKSTYPLY 239 (314)
T ss_pred ccccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCccccccCchhhh
Confidence 13678899999999999999999999753221000000 0000000
Q ss_pred ------------------cCCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 661 ------------------GNAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 661 ------------------~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
......+...+.++.+|+.+||..| |..|||+.++++
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~--P~~Rpt~~~ll~ 294 (314)
T cd08216 240 EDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRD--PESRPSASQLLN 294 (314)
T ss_pred cCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcC--CCcCcCHHHHhc
Confidence 0001112245678999999999999 999999999986
No 323
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.96 E-value=1.1e-29 Score=273.00 Aligned_cols=220 Identities=21% Similarity=0.271 Sum_probs=175.2
Q ss_pred ccccccCCceEEEEEEE-----CCeEEEEEEccCC------CCHHHHHHHHHHHhcc-CCCCccceeecccc--ceEEEE
Q 003594 467 FRLKCAGDWTNVYRGRL-----NHASVAIKTLNNG------LSEEDFQAKVSFLTAV-RHPHLVAVMGCCSE--LKCIVF 532 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~-----~~~~vAiK~l~~~------~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~~~lV~ 532 (808)
.+.+|.|+||.||++.. ++..||||++... .....+.+|+.++.++ +||||+++++.+.. ..++||
T Consensus 5 ~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 84 (288)
T cd05583 5 LRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKLHLIL 84 (288)
T ss_pred EEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEEEEEE
Confidence 35678999999999985 4578999998621 2235688999999999 69999999988855 678999
Q ss_pred eecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCC
Q 003594 533 EYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 612 (808)
Q Consensus 533 Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGl 612 (808)
||+++|+|.+++. ....+++..+..++.|++.||.|||+ .+++||||||.||+++.++.++|+|||+
T Consensus 85 e~~~~~~L~~~~~----------~~~~~~~~~~~~~~~ql~~~l~~lH~---~~~~H~dl~p~nil~~~~~~~~l~dfg~ 151 (288)
T cd05583 85 DYVNGGELFTHLY----------QREHFTESEVRVYIAEIVLALDHLHQ---LGIIYRDIKLENILLDSEGHVVLTDFGL 151 (288)
T ss_pred ecCCCCcHHHHHh----------hcCCcCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHeEECCCCCEEEEECcc
Confidence 9999999999984 33568999999999999999999999 6699999999999999999999999998
Q ss_pred ccc----------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCC
Q 003594 613 NIC----------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG 664 (808)
Q Consensus 613 a~~----------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~ 664 (808)
+.. ...+.++||||||+++|+|++|..||....... ........+. ....
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~-~~~~~~~~~~-~~~~ 229 (288)
T cd05583 152 SKEFLAEEEERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQN-SQSEISRRIL-KSKP 229 (288)
T ss_pred ccccccccccccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcccc-hHHHHHHHHH-ccCC
Confidence 742 014678999999999999999999985321100 0111111222 2234
Q ss_pred CCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHH
Q 003594 665 IWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDE 703 (808)
Q Consensus 665 ~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~ 703 (808)
..|...+..+.+++.+||+.| |..|||+.++...|+.
T Consensus 230 ~~~~~~~~~l~~li~~~l~~~--p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 230 PFPKTMSAEARDFIQKLLEKD--PKKRLGANGADEIKNH 266 (288)
T ss_pred CCCcccCHHHHHHHHHHhcCC--HhhccCcchHHHHhcC
Confidence 455667789999999999999 9999998888776654
No 324
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.96 E-value=2.6e-29 Score=268.60 Aligned_cols=216 Identities=17% Similarity=0.214 Sum_probs=166.4
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCC---CCHHHHHHHHHHHhccC-CCCccceeecccc----ceEEEEeecCC
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNG---LSEEDFQAKVSFLTAVR-HPHLVAVMGCCSE----LKCIVFEYMPN 537 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~---~~~~~~~~Ei~il~~l~-HpnIv~l~g~~~~----~~~lV~Ey~~~ 537 (808)
..+|.|+||.||+|.. ++..||+|.+... .......+|+.++.++. ||||+++++++.+ ..++||||++
T Consensus 5 ~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e~~~- 83 (282)
T cd07831 5 GKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFELMD- 83 (282)
T ss_pred eeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEecCC-
Confidence 4568899999999998 6789999998732 22334567999999985 9999999999854 6799999997
Q ss_pred CCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--
Q 003594 538 GNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-- 615 (808)
Q Consensus 538 gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-- 615 (808)
|+|.+.+.. ....++|..+..++.||+.||.|||+ .+|+||||||+||+++. +.+||+|||++..
T Consensus 84 ~~l~~~l~~---------~~~~~~~~~~~~~~~qi~~~L~~LH~---~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~ 150 (282)
T cd07831 84 MNLYELIKG---------RKRPLPEKRVKSYMYQLLKSLDHMHR---NGIFHRDIKPENILIKD-DILKLADFGSCRGIY 150 (282)
T ss_pred ccHHHHHHh---------ccCCCCHHHHHHHHHHHHHHHHHHHH---CCceecccCHHHEEEcC-CCeEEEecccccccc
Confidence 688888843 23568999999999999999999999 56999999999999999 9999999998742
Q ss_pred -----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhh---------cHHHHHHHhcc--
Q 003594 616 -----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMAL---------DQTTLMQVLDG-- 661 (808)
Q Consensus 616 -----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~---------~~~~~~~~ld~-- 661 (808)
..++.++|||||||++|+|++|.+||...+..... ....+......
T Consensus 151 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (282)
T cd07831 151 SKPPYTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAEVLKKFRKSR 230 (282)
T ss_pred cCCCcCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCCHHHHHhhcccc
Confidence 12467899999999999999999999542210000 00000111110
Q ss_pred -CCCCC-----------ChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 662 -NAGIW-----------PLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 662 -~~~~~-----------p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
....+ ....+..+.+|+.+||..+ |..||++.+++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~--P~~R~~~~~~l~ 278 (282)
T cd07831 231 HMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYD--PDERITAKQALR 278 (282)
T ss_pred cccccCcccccccHHHHcccccHHHHHHHHHHhccC--cccccCHHHHhh
Confidence 00111 1245789999999999999 999999998875
No 325
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.96 E-value=1.8e-29 Score=272.02 Aligned_cols=222 Identities=19% Similarity=0.254 Sum_probs=170.1
Q ss_pred cccccccccccCCceEEEEEEE--CCeEEEEEEccCCC----CHHHHHHHHHHHhccCCCCccceeeccc----cceEEE
Q 003594 462 DFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNGL----SEEDFQAKVSFLTAVRHPHLVAVMGCCS----ELKCIV 531 (808)
Q Consensus 462 ~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~----~~~~~~~Ei~il~~l~HpnIv~l~g~~~----~~~~lV 531 (808)
+|... +.+|.|+||.||+|.+ +++.||+|.+.... ....+.+|+.++.+++||||+++++++. ...|+|
T Consensus 6 ~y~~~-~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 6 EYEKL-NRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhh-hhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 34443 4567899999999998 47899999997221 2245778999999999999999999874 478999
Q ss_pred EeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCC
Q 003594 532 FEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLG 611 (808)
Q Consensus 532 ~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfG 611 (808)
|||++ ++|.+++... ...+++..++.|+.||+.||.|||+ .+|+||||||+|||++.++.+||+|||
T Consensus 85 ~e~~~-~~L~~~~~~~---------~~~l~~~~~~~i~~qi~~aL~~LH~---~~i~H~dl~p~nili~~~~~~~l~d~g 151 (293)
T cd07843 85 MEYVE-HDLKSLMETM---------KQPFLQSEVKCLMLQLLSGVAHLHD---NWILHRDLKTSNLLLNNRGILKICDFG 151 (293)
T ss_pred ehhcC-cCHHHHHHhc---------cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCCHHHEEECCCCcEEEeecC
Confidence 99997 5999998532 2368999999999999999999999 569999999999999999999999999
Q ss_pred Cccc--------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcH----------HHH
Q 003594 612 LNIC--------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQ----------TTL 655 (808)
Q Consensus 612 la~~--------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~----------~~~ 655 (808)
++.. ..++.++||||||+++|+|++|.+||........... ..+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 231 (293)
T cd07843 152 LAREYGSPLKPYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIW 231 (293)
T ss_pred ceeeccCCccccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHH
Confidence 8642 1246789999999999999999999864221000000 000
Q ss_pred HHH---hc------------cCCCCCChh-hHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 656 MQV---LD------------GNAGIWPLD-LAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 656 ~~~---ld------------~~~~~~p~~-~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
... .. .....++.. .++.+.+++.+||+.+ |+.||++.+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~--p~~R~t~~ell~ 289 (293)
T cd07843 232 PGFSELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYD--PAKRISAEDALK 289 (293)
T ss_pred HHhhccchhcccccccccchhhhccccccCCChHHHHHHHHHhccC--ccccCCHHHHhc
Confidence 000 00 001112222 4788999999999999 999999999875
No 326
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.96 E-value=2e-29 Score=315.36 Aligned_cols=236 Identities=25% Similarity=0.380 Sum_probs=180.9
Q ss_pred ccCHHHHHHhhccccccccccccCCceEEEEEEE--CCeEEEEEEccCCCCHHHHHHHHHHHhccCCCCccceeecccc-
Q 003594 450 EYAAEDIRLATEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE- 526 (808)
Q Consensus 450 ~~~~~ei~~at~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~- 526 (808)
.++++++.. .|... .++|+|+||.||+|.+ ++..||||.+..... ....|+.++++++|||||+++|+|.+
T Consensus 682 ~~~~~~~~~---~~~~~-~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~--~~~~~~~~l~~l~HpnIv~~~~~~~~~ 755 (968)
T PLN00113 682 SITINDILS---SLKEE-NVISRGKKGASYKGKSIKNGMQFVVKEINDVNS--IPSSEIADMGKLQHPNIVKLIGLCRSE 755 (968)
T ss_pred hhhHHHHHh---hCCcc-cEEccCCCeeEEEEEECCCCcEEEEEEccCCcc--ccHHHHHHHhhCCCCCcceEEEEEEcC
Confidence 345555543 34433 4678999999999997 689999999873322 22356889999999999999999965
Q ss_pred -ceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccE
Q 003594 527 -LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVA 605 (808)
Q Consensus 527 -~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~ 605 (808)
..|+||||+++|+|.+++. .++|..+.+|+.||+.||.|||....++|+||||||+||+++.++.+
T Consensus 756 ~~~~lv~Ey~~~g~L~~~l~-------------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~ 822 (968)
T PLN00113 756 KGAYLIHEYIEGKNLSEVLR-------------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEP 822 (968)
T ss_pred CCCEEEEeCCCCCcHHHHHh-------------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCce
Confidence 7899999999999999993 28999999999999999999997655789999999999999998888
Q ss_pred EEEeCCCccc---------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhH--------HH-hhhcHHHH
Q 003594 606 KISGLGLNIC---------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVE--------KA-MALDQTTL 655 (808)
Q Consensus 606 kl~DfGla~~---------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~--------~~-~~~~~~~~ 655 (808)
++. ||.+.. ..++.++|||||||++|||+||++||.... +. ........
T Consensus 823 ~~~-~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 901 (968)
T PLN00113 823 HLR-LSLPGLLCTDTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFGVHGSIVEWARYCYSDCHL 901 (968)
T ss_pred EEE-eccccccccCCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccCCCCcHHHHHHHhcCccch
Confidence 775 444311 347889999999999999999999985311 10 00011112
Q ss_pred HHHhccCC---CCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHHHHh
Q 003594 656 MQVLDGNA---GIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVRKK 707 (808)
Q Consensus 656 ~~~ld~~~---~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~~~ 707 (808)
..++++.. ...+.....++.+++.+||+.| |..||+|.+|++.|+.+.+.
T Consensus 902 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~--P~~RPt~~evl~~L~~~~~~ 954 (968)
T PLN00113 902 DMWIDPSIRGDVSVNQNEIVEVMNLALHCTATD--PTARPCANDVLKTLESASRS 954 (968)
T ss_pred hheeCccccCCCCccHHHHHHHHHHHHhhCcCC--chhCcCHHHHHHHHHHhhcc
Confidence 22333321 1233456668899999999999 99999999999999988653
No 327
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.96 E-value=1e-29 Score=273.05 Aligned_cols=219 Identities=20% Similarity=0.211 Sum_probs=169.9
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCC---CCHHHHHHHHHHHhccC-CCCccceeecccc--ceEEEEeecCCCC
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNG---LSEEDFQAKVSFLTAVR-HPHLVAVMGCCSE--LKCIVFEYMPNGN 539 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~---~~~~~~~~Ei~il~~l~-HpnIv~l~g~~~~--~~~lV~Ey~~~gs 539 (808)
..+|.|+||.||++.+ ++..||||.+... .....+.+|+.++.++. ||||+++++++.. ..+++|||+. ++
T Consensus 10 ~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~~~-~~ 88 (288)
T cd06616 10 GEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMELMD-IS 88 (288)
T ss_pred HHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEeccc-CC
Confidence 4568899999999998 5789999998732 22457889999999996 9999999998854 6789999986 56
Q ss_pred HHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc----
Q 003594 540 LRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC---- 615 (808)
Q Consensus 540 L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~---- 615 (808)
|.++...... .....+++..+..++.+++.||.|||+. .+|+||||||+|||++.++.+||+|||++..
T Consensus 89 l~~l~~~~~~-----~~~~~l~~~~~~~i~~~i~~~l~~lh~~--~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~ 161 (288)
T cd06616 89 LDKFYKYVYE-----VLKSVIPEEILGKIAVATVKALNYLKEE--LKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDS 161 (288)
T ss_pred HHHHHHHHHH-----hhcCCCCHHHHHHHHHHHHHHHHHHhhc--CCeeccCCCHHHEEEccCCcEEEeecchhHHhccC
Confidence 6654421100 1346799999999999999999999973 2699999999999999999999999998742
Q ss_pred --------------------C---CCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCC----CCh
Q 003594 616 --------------------D---QLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGI----WPL 668 (808)
Q Consensus 616 --------------------~---~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~----~p~ 668 (808)
. .++.++|||||||++|+|++|++||..... ....+..+.....+. .+.
T Consensus 162 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 237 (288)
T cd06616 162 IAKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS----VFDQLTQVVKGDPPILSNSEER 237 (288)
T ss_pred CccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch----HHHHHhhhcCCCCCcCCCcCCC
Confidence 1 367789999999999999999999864321 011122222221111 123
Q ss_pred hhHHHHHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 669 DLAEELAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 669 ~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
.++..+.+|+.+||+.+ |..||++.+|+..
T Consensus 238 ~~~~~l~~li~~~l~~~--p~~Rpt~~~i~~~ 267 (288)
T cd06616 238 EFSPSFVNFINLCLIKD--ESKRPKYKELLEH 267 (288)
T ss_pred ccCHHHHHHHHHHccCC--hhhCcCHHHHhcC
Confidence 47889999999999999 9999999988763
No 328
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.96 E-value=2.2e-29 Score=273.84 Aligned_cols=218 Identities=21% Similarity=0.227 Sum_probs=169.9
Q ss_pred ccccccccccccCCceEEEEEEE--CCeEEEEEEccCCC----CHHHHHHHHHHHhccCCCCccceeecccc----ceEE
Q 003594 461 EDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNGL----SEEDFQAKVSFLTAVRHPHLVAVMGCCSE----LKCI 530 (808)
Q Consensus 461 ~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~----~~~~~~~Ei~il~~l~HpnIv~l~g~~~~----~~~l 530 (808)
++|... +.+|.|+||.||+|.+ +|..||+|.+.... ....+.+|+.++.+++||||+++++++.+ ..++
T Consensus 7 ~~y~~~-~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 7 TEFEKL-NRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred cceeEe-eeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 445443 4567899999999998 58999999987221 12356789999999999999999999853 5799
Q ss_pred EEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeC
Q 003594 531 VFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGL 610 (808)
Q Consensus 531 V~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~Df 610 (808)
||||+. ++|.+++.. ....+++..+..++.||+.||.|||+ .+++||||||+|||++.++.+||+||
T Consensus 86 v~e~~~-~~l~~~l~~---------~~~~l~~~~~~~~~~qi~~~l~~lH~---~~i~H~dl~p~nil~~~~~~~kL~df 152 (309)
T cd07845 86 VMEYCE-QDLASLLDN---------MPTPFSESQVKCLMLQLLRGLQYLHE---NFIIHRDLKVSNLLLTDKGCLKIADF 152 (309)
T ss_pred EEecCC-CCHHHHHHh---------cccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCCCEEECcc
Confidence 999996 589988853 23568999999999999999999999 56999999999999999999999999
Q ss_pred CCccc--------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhcc---
Q 003594 611 GLNIC--------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDG--- 661 (808)
Q Consensus 611 Gla~~--------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~--- 661 (808)
|++.. ..++.++|||||||++|+|++|++||...... ..+..+.+.
T Consensus 153 g~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~-----~~~~~~~~~~~~ 227 (309)
T cd07845 153 GLARTYGLPAKPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEI-----EQLDLIIQLLGT 227 (309)
T ss_pred ceeeecCCccCCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHHhcCC
Confidence 98742 12567899999999999999999998643221 111111100
Q ss_pred ------------------CCCCCC--------hhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 662 ------------------NAGIWP--------LDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 662 ------------------~~~~~p--------~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
.....+ ...++.+.++|.+||..| |.+|||+.+++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~d--p~~R~t~~~il~ 289 (309)
T cd07845 228 PNESIWPGFSDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYD--PKKRATAEEALE 289 (309)
T ss_pred CChhhchhhhcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCC--hhhCcCHHHHhc
Confidence 000000 124678899999999999 999999998875
No 329
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.96 E-value=2.8e-29 Score=278.51 Aligned_cols=221 Identities=17% Similarity=0.219 Sum_probs=169.4
Q ss_pred ccccccccccccCCceEEEEEEE--CCeEEEEEEccCC----CCHHHHHHHHHHHhccCCCCccceeecccc--------
Q 003594 461 EDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNG----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE-------- 526 (808)
Q Consensus 461 ~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-------- 526 (808)
+.|.. .+.+|.|+||.||+|.. +|..||||.+... .....+.+|+.++++++||||++++++|..
T Consensus 16 ~~y~~-~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 94 (353)
T cd07850 16 KRYQN-LKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEFQ 94 (353)
T ss_pred cceEE-EEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCccccC
Confidence 44554 46678999999999998 6899999998632 123567889999999999999999998742
Q ss_pred ceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEE
Q 003594 527 LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAK 606 (808)
Q Consensus 527 ~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~k 606 (808)
..|+||||+. ++|.+.+. . .+++..+..++.|++.||.|||+ .+|+||||||+|||++.++.+|
T Consensus 95 ~~~lv~e~~~-~~l~~~~~----------~--~l~~~~~~~~~~ql~~aL~~LH~---~gi~H~dlkp~Nil~~~~~~~k 158 (353)
T cd07850 95 DVYLVMELMD-ANLCQVIQ----------M--DLDHERMSYLLYQMLCGIKHLHS---AGIIHRDLKPSNIVVKSDCTLK 158 (353)
T ss_pred cEEEEEeccC-CCHHHHHh----------h--cCCHHHHHHHHHHHHHHHHHHHh---CCeeeCCCCHHHEEECCCCCEE
Confidence 4689999996 68888883 2 28899999999999999999999 5699999999999999999999
Q ss_pred EEeCCCccc------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhh---------cHH
Q 003594 607 ISGLGLNIC------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMAL---------DQT 653 (808)
Q Consensus 607 l~DfGla~~------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~---------~~~ 653 (808)
|+|||++.. ..++.++|||||||++|+|++|+.||...+..... ...
T Consensus 159 L~Dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 238 (353)
T cd07850 159 ILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSD 238 (353)
T ss_pred EccCccceeCCCCCCCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCH
Confidence 999999853 23678899999999999999999998532110000 000
Q ss_pred HH--------HHHhccCC--------------------CCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 654 TL--------MQVLDGNA--------------------GIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 654 ~~--------~~~ld~~~--------------------~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
.+ ....+... ...+...+..+.+++.+||..| |+.||++.+++..
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d--P~~R~t~~eiL~~ 311 (353)
T cd07850 239 EFMSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVID--PEKRISVDDALQH 311 (353)
T ss_pred HHHHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCC--hhhCcCHHHHhcC
Confidence 00 00000000 0001234667899999999999 9999999999853
No 330
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.96 E-value=2.6e-29 Score=271.66 Aligned_cols=223 Identities=16% Similarity=0.190 Sum_probs=171.7
Q ss_pred hhccccccccccccCCceEEEEEEE--CCeEEEEEEccCC----CCHHHHHHHHHHHhccCCCCccceeecccc------
Q 003594 459 ATEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNG----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE------ 526 (808)
Q Consensus 459 at~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~------ 526 (808)
+.++|... ..+|.|+||.||+|.+ +|..||||.++.. .....+.+|+.+++.++||||+++++++.+
T Consensus 5 ~~~~~~~~-~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 5 CVDKFDII-GQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhee-eeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 34455544 4567899999999998 5789999999722 233567889999999999999999998853
Q ss_pred ------ceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccC
Q 003594 527 ------LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLD 600 (808)
Q Consensus 527 ------~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld 600 (808)
..++||||+++ +|.+.+.. ....+++..+..|+.||+.||.|||+ .+|+||||||+||+++
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~---------~~~~~~~~~~~~i~~qi~~aL~~LH~---~~i~H~dl~p~nili~ 150 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLES---------GLVHFSEDHIKSFMKQLLEGLNYCHK---KNFLHRDIKCSNILLN 150 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhc---------CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEC
Confidence 47899999975 77777742 23468999999999999999999999 5699999999999999
Q ss_pred CCccEEEEeCCCccc---------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHH
Q 003594 601 RNLVAKISGLGLNIC---------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQT 653 (808)
Q Consensus 601 ~~~~~kl~DfGla~~---------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~ 653 (808)
.++.+||+|||++.. ..++.++|||||||++|+|++|++||...... ....
T Consensus 151 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~--~~~~ 228 (302)
T cd07864 151 NKGQIKLADFGLARLYNSEESRPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQEL--AQLE 228 (302)
T ss_pred CCCcEEeCcccccccccCCcccccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH--HHHH
Confidence 999999999998742 12467899999999999999999999643221 0000
Q ss_pred HHHHHhcc-CCC-------------------------CCChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 654 TLMQVLDG-NAG-------------------------IWPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 654 ~~~~~ld~-~~~-------------------------~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
.+...... ... ......+..+.+++.+||..+ |..||++.+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~--P~~Rp~~~~il~ 298 (302)
T cd07864 229 LISRLCGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLD--PSKRCTAEEALN 298 (302)
T ss_pred HHHHHhCCCChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCC--hhhCCCHHHHhc
Confidence 11111100 000 011235788999999999999 999999988874
No 331
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.96 E-value=1.9e-29 Score=277.64 Aligned_cols=220 Identities=17% Similarity=0.260 Sum_probs=171.1
Q ss_pred cccccccccccCCceEEEEEEE--CCeEEEEEEccCCCC----------------HHHHHHHHHHHhccCCCCccceeec
Q 003594 462 DFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNGLS----------------EEDFQAKVSFLTAVRHPHLVAVMGC 523 (808)
Q Consensus 462 ~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~~----------------~~~~~~Ei~il~~l~HpnIv~l~g~ 523 (808)
.|....+++|.|+||.||+|.+ +++.||||.+..... ...+.+|+.+++.++||||++++++
T Consensus 9 ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~ 88 (335)
T PTZ00024 9 RYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDV 88 (335)
T ss_pred chhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEE
Confidence 3444456788999999999997 578999999862211 1247899999999999999999999
Q ss_pred ccc--ceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCC
Q 003594 524 CSE--LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDR 601 (808)
Q Consensus 524 ~~~--~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~ 601 (808)
+.. ..++||||+. |+|.+++. ....+++.....++.|++.||.|||+ .+|+||||+|+|||++.
T Consensus 89 ~~~~~~~~lv~e~~~-~~l~~~l~----------~~~~~~~~~~~~~~~ql~~aL~~LH~---~~i~H~dl~~~nill~~ 154 (335)
T PTZ00024 89 YVEGDFINLVMDIMA-SDLKKVVD----------RKIRLTESQVKCILLQILNGLNVLHK---WYFMHRDLSPANIFINS 154 (335)
T ss_pred EecCCcEEEEEeccc-cCHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHh---CCeecccccHHHeEECC
Confidence 854 7899999997 69999983 34568999999999999999999999 56999999999999999
Q ss_pred CccEEEEeCCCccc----------------------------------------CCCCcchhhHhHHHHHHHHHcCCCCc
Q 003594 602 NLVAKISGLGLNIC----------------------------------------DQLNVRSDIRAFGTLLLHLLTGRNWA 641 (808)
Q Consensus 602 ~~~~kl~DfGla~~----------------------------------------~~~t~ksDVwS~Gvil~elltG~~P~ 641 (808)
++.+||+|||++.. ..++.++|||||||++|+|+||.+||
T Consensus 155 ~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~ 234 (335)
T PTZ00024 155 KGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLF 234 (335)
T ss_pred CCCEEECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCC
Confidence 99999999997632 12467899999999999999999998
Q ss_pred hhhHHHhhhcHHHHHHHhc-cCCCCC-----------------------ChhhHHHHHHHHHHhhccCCCcCccccHHhh
Q 003594 642 GLVEKAMALDQTTLMQVLD-GNAGIW-----------------------PLDLAEELAGIALKCLSADQDANRDLRIAGV 697 (808)
Q Consensus 642 ~~~~~~~~~~~~~~~~~ld-~~~~~~-----------------------p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~ev 697 (808)
......... ......+. +....| ....+..+.+++.+||..+ |..||++.++
T Consensus 235 ~~~~~~~~~--~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~--P~~R~s~~~~ 310 (335)
T PTZ00024 235 PGENEIDQL--GRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLKTIFPNASDDAIDLLQSLLKLN--PLERISAKEA 310 (335)
T ss_pred CCCCHHHHH--HHHHHHhCCCchhhCcchhhcccccccCcCCcccHHHhCcCCChHHHHHHHHHcCCC--chhccCHHHH
Confidence 643221000 00001000 000001 1234678999999999999 9999999998
Q ss_pred HH
Q 003594 698 MK 699 (808)
Q Consensus 698 l~ 699 (808)
+.
T Consensus 311 l~ 312 (335)
T PTZ00024 311 LK 312 (335)
T ss_pred hc
Confidence 85
No 332
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.96 E-value=2.4e-29 Score=276.10 Aligned_cols=217 Identities=20% Similarity=0.242 Sum_probs=169.7
Q ss_pred cCCceEEEEEEE--CCeEEEEEEccCCC-C---HHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCHHHH
Q 003594 472 AGDWTNVYRGRL--NHASVAIKTLNNGL-S---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNLRDK 543 (808)
Q Consensus 472 ~G~~g~Vy~~~~--~~~~vAiK~l~~~~-~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL~~~ 543 (808)
.|+||.||++.+ +|+.||+|++.... . .+.+.+|+.++..++||||++++++|.. ..++||||+++|+|.++
T Consensus 10 ~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~~~l~~~ 89 (328)
T cd08226 10 FCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAYGSANSL 89 (328)
T ss_pred ccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccCCCHHHH
Confidence 348999999998 78999999987322 2 3568899999999999999999999965 78999999999999999
Q ss_pred HhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--------
Q 003594 544 LFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-------- 615 (808)
Q Consensus 544 l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-------- 615 (808)
+... ....+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.++++|||.+..
T Consensus 90 l~~~--------~~~~~~~~~~~~~~~qi~~aL~~lH~---~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~ 158 (328)
T cd08226 90 LKTY--------FPEGMSEALIGNILFGALRGLNYLHQ---NGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKA 158 (328)
T ss_pred HHhh--------cccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccc
Confidence 8643 23458999999999999999999999 5699999999999999999999999963210
Q ss_pred --------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhc---------
Q 003594 616 --------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLD--------- 660 (808)
Q Consensus 616 --------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld--------- 660 (808)
..++.++|||||||++|+|++|++||...... ......+.
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~-----~~~~~~~~~~~~~~~~~ 233 (328)
T cd08226 159 KVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRT-----QMLLQKLKGPPYSPLDI 233 (328)
T ss_pred cccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChH-----HHHHHHhcCCCCCCccc
Confidence 12567899999999999999999999643210 00000000
Q ss_pred -------------------------------------cCCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHH--HH
Q 003594 661 -------------------------------------GNAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMK--EL 701 (808)
Q Consensus 661 -------------------------------------~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~--~L 701 (808)
......+..++..+.+|+.+||+.| |..|||+.++++ .+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d--P~~Rpta~e~l~~~~~ 311 (328)
T cd08226 234 TTFPCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQD--PEKRPSASSLLSHAFF 311 (328)
T ss_pred cccchhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCC--cccCCCHHHHhhCHHH
Confidence 0011112346788999999999999 999999999975 34
Q ss_pred HHHHH
Q 003594 702 DEVRK 706 (808)
Q Consensus 702 ~~l~~ 706 (808)
..+++
T Consensus 312 ~~~~~ 316 (328)
T cd08226 312 KQVKE 316 (328)
T ss_pred HHHHH
Confidence 44443
No 333
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.96 E-value=1.5e-29 Score=278.81 Aligned_cols=222 Identities=18% Similarity=0.200 Sum_probs=170.0
Q ss_pred ccccccccccccCCceEEEEEEE--CCeEEEEEEccCC---CCHHHHHHHHHHHhccCCCCccceeecccc-------ce
Q 003594 461 EDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNG---LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE-------LK 528 (808)
Q Consensus 461 ~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~---~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-------~~ 528 (808)
++|.. .+.+|.|+||.||+|.+ +|..||||++... .....+.+|+.++++++||||+++++++.. ..
T Consensus 5 ~~y~i-~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 5 PRYQN-LSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred cceEE-EEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 45554 45668899999999987 6899999998632 233568889999999999999999988643 46
Q ss_pred EEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEE
Q 003594 529 CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKIS 608 (808)
Q Consensus 529 ~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~ 608 (808)
++||||+. ++|.+++. ...+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+
T Consensus 84 ~lv~e~~~-~~l~~~~~-----------~~~l~~~~~~~i~~ql~~aL~~LH~---~~ivH~dlkp~Nill~~~~~~kl~ 148 (336)
T cd07849 84 YIVQELME-TDLYKLIK-----------TQHLSNDHIQYFLYQILRGLKYIHS---ANVLHRDLKPSNLLLNTNCDLKIC 148 (336)
T ss_pred EEEehhcc-cCHHHHHh-----------cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEECCCCCEEEC
Confidence 89999997 58888773 3468999999999999999999999 569999999999999999999999
Q ss_pred eCCCccc-----------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhh----------
Q 003594 609 GLGLNIC-----------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMA---------- 649 (808)
Q Consensus 609 DfGla~~-----------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~---------- 649 (808)
|||++.. ..++.++|||||||++|+|++|++||...+....
T Consensus 149 dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~~~~~~~~~~~~~~ 228 (336)
T cd07849 149 DFGLARIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGT 228 (336)
T ss_pred cccceeeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCC
Confidence 9998732 1356789999999999999999999853211000
Q ss_pred hcHHHHHHHhcc----------CCCCC-----ChhhHHHHHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 650 LDQTTLMQVLDG----------NAGIW-----PLDLAEELAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 650 ~~~~~~~~~ld~----------~~~~~-----p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
.....+..+... ..... ....+..+.+++.+||+.+ |..||++.+++..
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d--P~~Rpt~~e~l~h 292 (336)
T cd07849 229 PSQEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFN--PHKRITVEEALAH 292 (336)
T ss_pred CCHHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCC--hhhCcCHHHHhcC
Confidence 000111111110 00000 1234678999999999999 9999999988865
No 334
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=99.96 E-value=2e-29 Score=277.45 Aligned_cols=223 Identities=14% Similarity=0.206 Sum_probs=172.3
Q ss_pred ccccccccccccCCceEEEEEEE--CCeEEEEEEccCC----CCHHHHHHHHHHHhccCCCCccceeecccc------ce
Q 003594 461 EDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNG----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE------LK 528 (808)
Q Consensus 461 ~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~------~~ 528 (808)
++|... +.+|.|+||.||+|.. +|..||+|++... .....+.+|+.+|.+++||||+++++++.. ..
T Consensus 5 ~~y~~~-~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 5 SRYKPI-ENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hceeee-eeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 445443 4568899999999997 5899999998732 234677889999999999999999998742 57
Q ss_pred EEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEE
Q 003594 529 CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKIS 608 (808)
Q Consensus 529 ~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~ 608 (808)
++||||+. |+|.+++. ....+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+
T Consensus 84 ~lv~e~~~-~~l~~~~~----------~~~~~~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlkp~Nil~~~~~~~kl~ 149 (334)
T cd07855 84 YVVMDLME-SDLHHIIH----------SDQPLTEEHIRYFLYQLLRGLKYIHS---ANVIHRDLKPSNLLVNEDCELRIG 149 (334)
T ss_pred EEEEehhh-hhHHHHhc----------cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEec
Confidence 89999995 68999883 34569999999999999999999999 569999999999999999999999
Q ss_pred eCCCccc------------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhh---------
Q 003594 609 GLGLNIC------------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMA--------- 649 (808)
Q Consensus 609 DfGla~~------------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~--------- 649 (808)
|||++.. ..++.++|||||||++|+|++|++||........
T Consensus 150 dfg~~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g 229 (334)
T cd07855 150 DFGMARGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLG 229 (334)
T ss_pred ccccceeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHHHHHHHHHhC
Confidence 9998732 1256789999999999999999999853211000
Q ss_pred ---------hcHHHHHHHhc--cCCCCC-----ChhhHHHHHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 650 ---------LDQTTLMQVLD--GNAGIW-----PLDLAEELAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 650 ---------~~~~~~~~~ld--~~~~~~-----p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
..........+ +..... ....+..+.+++.+||+.+ |+.||++.+++..
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~--P~~Rpt~~~~l~~ 294 (334)
T cd07855 230 SPSEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFD--PEERITVEQALQH 294 (334)
T ss_pred CChhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCC--hhhCcCHHHHHhC
Confidence 00000111111 111111 1245788999999999999 9999999988763
No 335
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.96 E-value=4.3e-29 Score=270.62 Aligned_cols=220 Identities=15% Similarity=0.235 Sum_probs=166.7
Q ss_pred cccccccccccCCceEEEEEEE--CCeEEEEEEccCC----CCHHHHHHHHHHHhccCCCCccceeecccc---------
Q 003594 462 DFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNG----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--------- 526 (808)
Q Consensus 462 ~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--------- 526 (808)
+|... ..+|.|+||.||+|.. ++..||||.+... .....+.+|+.++++++||||++++++|..
T Consensus 13 ~y~~~-~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 91 (310)
T cd07865 13 KYEKL-AKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRYK 91 (310)
T ss_pred heEEE-EEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCCC
Confidence 45443 4567899999999998 5799999998622 123456789999999999999999998743
Q ss_pred -ceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccE
Q 003594 527 -LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVA 605 (808)
Q Consensus 527 -~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~ 605 (808)
..++||||+. ++|.+++.. ....+++..++.++.||+.||.|||+ .+|+|+||||+|||++.++.+
T Consensus 92 ~~~~lv~e~~~-~~l~~~l~~---------~~~~~~~~~~~~i~~qi~~al~~lH~---~~i~H~dl~p~nil~~~~~~~ 158 (310)
T cd07865 92 GSFYLVFEFCE-HDLAGLLSN---------KNVKFTLSEIKKVMKMLLNGLYYIHR---NKILHRDMKAANILITKDGIL 158 (310)
T ss_pred ceEEEEEcCCC-cCHHHHHHh---------cccCCCHHHHHHHHHHHHHHHHHHHH---CCeeccCCCHHHEEECCCCcE
Confidence 3499999996 588888842 23468999999999999999999999 569999999999999999999
Q ss_pred EEEeCCCccc------------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHH
Q 003594 606 KISGLGLNIC------------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTL 655 (808)
Q Consensus 606 kl~DfGla~~------------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~ 655 (808)
||+|||++.. ..++.++||||||+++|+|+||++||...... .....+
T Consensus 159 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~--~~~~~~ 236 (310)
T cd07865 159 KLADFGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQ--HQLTLI 236 (310)
T ss_pred EECcCCCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHH--HHHHHH
Confidence 9999997732 12467899999999999999999998642211 000000
Q ss_pred HHHhc---------------------cCC-------CCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 656 MQVLD---------------------GNA-------GIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 656 ~~~ld---------------------~~~-------~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
..+.. +.. ..++...+..+.+||.+||..| |..||++.+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~--P~~R~t~~e~l~ 306 (310)
T cd07865 237 SQLCGSITPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLD--PAKRIDADTALN 306 (310)
T ss_pred HHHhCCCChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCC--hhhccCHHHHhc
Confidence 11000 000 0001112456789999999999 999999998874
No 336
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.96 E-value=4.4e-29 Score=261.73 Aligned_cols=206 Identities=24% Similarity=0.310 Sum_probs=172.2
Q ss_pred cccCCceEEEEEEE--CCeEEEEEEccCCC-----CHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCH
Q 003594 470 KCAGDWTNVYRGRL--NHASVAIKTLNNGL-----SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNL 540 (808)
Q Consensus 470 ~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~-----~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL 540 (808)
+|.|+||.||++.. ++..||+|.+.... ....+..|+.++++++||||+++++.+.+ ..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 47899999999998 47899999987322 34578999999999999999999999865 77999999999999
Q ss_pred HHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-----
Q 003594 541 RDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC----- 615 (808)
Q Consensus 541 ~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~----- 615 (808)
.+++. ....+++..+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++..
T Consensus 81 ~~~l~----------~~~~l~~~~~~~~~~qi~~~l~~lh~---~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~ 147 (250)
T cd05123 81 FSHLS----------KEGRFSEERARFYAAEIVLALEYLHS---LGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEG 147 (250)
T ss_pred HHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHH---CCceecCCCcceEEEcCCCcEEEeecCcceecccCC
Confidence 99994 33468999999999999999999999 5699999999999999999999999998742
Q ss_pred --------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHHHH
Q 003594 616 --------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELA 675 (808)
Q Consensus 616 --------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~ 675 (808)
...+.++|+||||+++|+|++|..||...+. ......+.. ....+|...+..+.
T Consensus 148 ~~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~-----~~~~~~~~~-~~~~~~~~~~~~l~ 221 (250)
T cd05123 148 SRTNTFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR-----KEIYEKILK-DPLRFPEFLSPEAR 221 (250)
T ss_pred CcccCCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHhc-CCCCCCCCCCHHHH
Confidence 1245789999999999999999999965321 122222222 34556667789999
Q ss_pred HHHHHhhccCCCcCccccHHh
Q 003594 676 GIALKCLSADQDANRDLRIAG 696 (808)
Q Consensus 676 ~Li~~Cl~~dp~p~~Rps~~e 696 (808)
+++.+||..| |..||++.+
T Consensus 222 ~~i~~~l~~~--p~~R~~~~~ 240 (250)
T cd05123 222 DLISGLLQKD--PTKRLGSGG 240 (250)
T ss_pred HHHHHHhcCC--HhhCCCccc
Confidence 9999999999 999999854
No 337
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.96 E-value=4.7e-29 Score=272.06 Aligned_cols=213 Identities=20% Similarity=0.327 Sum_probs=169.5
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCC--CC---HHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCC
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNG--LS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNG 538 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~--~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~g 538 (808)
..+|.|+||.||+|.. +|..|++|.+... .. ...+.+|+.+++.++|||++++++++.+ ..|+||||+. |
T Consensus 27 ~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~ 105 (313)
T cd06633 27 HEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEYCL-G 105 (313)
T ss_pred eeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEecCC-C
Confidence 4467899999999997 6789999998722 11 2468889999999999999999999865 6899999996 6
Q ss_pred CHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc---
Q 003594 539 NLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC--- 615 (808)
Q Consensus 539 sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~--- 615 (808)
+|.+++.. ...++++..+..++.||+.||.|||+ .+|+||||+|+||+++.++.+||+|||++..
T Consensus 106 ~l~~~l~~---------~~~~l~~~~~~~~~~qi~~al~~LH~---~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~ 173 (313)
T cd06633 106 SASDLLEV---------HKKPLQEVEIAAITHGALQGLAYLHS---HNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP 173 (313)
T ss_pred CHHHHHHh---------cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCChhhEEECCCCCEEEeecCCCcccCC
Confidence 88888742 23568999999999999999999999 5699999999999999999999999998642
Q ss_pred ---------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCC-CChhhHHH
Q 003594 616 ---------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGI-WPLDLAEE 673 (808)
Q Consensus 616 ---------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~-~p~~~~~~ 673 (808)
..++.++|||||||++|+|++|.+||..... ......+.....+. .....+..
T Consensus 174 ~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 248 (313)
T cd06633 174 ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-----MSALYHIAQNDSPTLQSNEWTDS 248 (313)
T ss_pred CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCh-----HHHHHHHHhcCCCCCCccccCHH
Confidence 2256689999999999999999999865321 11111121111111 12245678
Q ss_pred HHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 674 LAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 674 l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
+.+|+.+||+.+ |..||++.+++..
T Consensus 249 l~~li~~~l~~~--P~~Rp~~~~~l~~ 273 (313)
T cd06633 249 FRGFVDYCLQKI--PQERPASAELLRH 273 (313)
T ss_pred HHHHHHHHccCC--hhhCcCHHHHhcC
Confidence 999999999999 9999999988843
No 338
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.96 E-value=4e-30 Score=258.05 Aligned_cols=213 Identities=18% Similarity=0.264 Sum_probs=175.5
Q ss_pred ccccCCceEEEEEEE--CCeEEEEEEccCCCC---HHHHHHHHHHHhccC-CCCccceeecccc--ceEEEEeecCCCCH
Q 003594 469 LKCAGDWTNVYRGRL--NHASVAIKTLNNGLS---EEDFQAKVSFLTAVR-HPHLVAVMGCCSE--LKCIVFEYMPNGNL 540 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~~---~~~~~~Ei~il~~l~-HpnIv~l~g~~~~--~~~lV~Ey~~~gsL 540 (808)
.+|.|+.|.|++++. +|...|||.+..... .++++..+.++.+.+ .|.||+.+|+|.. ..++.||.|. .-+
T Consensus 99 dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMelMs-~C~ 177 (391)
T KOG0983|consen 99 DLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICMELMS-TCA 177 (391)
T ss_pred hhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHHHHH-HHH
Confidence 458999999999998 579999999984433 356778888877765 8999999999954 6788899984 445
Q ss_pred HHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-----
Q 003594 541 RDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC----- 615 (808)
Q Consensus 541 ~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~----- 615 (808)
..+|. .-..++++..+-++...+.+||.||... .+|||||+||+|||||+.|++|+||||++..
T Consensus 178 ekLlk---------rik~piPE~ilGk~tva~v~AL~YLKeK--H~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSk 246 (391)
T KOG0983|consen 178 EKLLK---------RIKGPIPERILGKMTVAIVKALYYLKEK--HGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSK 246 (391)
T ss_pred HHHHH---------HhcCCchHHhhhhhHHHHHHHHHHHHHh--cceeecccCccceEEccCCCEEeecccccceeeccc
Confidence 55553 2346799999999999999999999874 4799999999999999999999999999743
Q ss_pred ----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCCh--hhH
Q 003594 616 ----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPL--DLA 671 (808)
Q Consensus 616 ----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~--~~~ 671 (808)
..|+.++|||||||.|+||.||..||.... .+...+..+++...+..|. ..+
T Consensus 247 AhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~----tdFe~ltkvln~ePP~L~~~~gFS 322 (391)
T KOG0983|consen 247 AHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCK----TDFEVLTKVLNEEPPLLPGHMGFS 322 (391)
T ss_pred ccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCC----ccHHHHHHHHhcCCCCCCcccCcC
Confidence 347788999999999999999999997632 4456677777755444443 479
Q ss_pred HHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 672 EELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 672 ~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
+.+.+++..||.+| ++.||...++++
T Consensus 323 p~F~~fv~~CL~kd--~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 323 PDFQSFVKDCLTKD--HRKRPKYNKLLE 348 (391)
T ss_pred HHHHHHHHHHhhcC--cccCcchHHHhc
Confidence 99999999999999 999999888775
No 339
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.96 E-value=1.8e-29 Score=278.30 Aligned_cols=218 Identities=17% Similarity=0.238 Sum_probs=171.0
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccCC----CCHHHHHHHHHHHhccCCCCccceeecccc-------ceEEEEe
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNNG----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE-------LKCIVFE 533 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-------~~~lV~E 533 (808)
.+.+|.|+||.||+|.. ++..||||.+... .....+.+|+.+++.++||||+++++++.. ..|+|||
T Consensus 10 ~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~~~lv~e 89 (337)
T cd07858 10 IKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFNDVYIVYE 89 (337)
T ss_pred EEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCcEEEEEe
Confidence 45678999999999998 5799999998732 224567889999999999999999998743 3699999
Q ss_pred ecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCc
Q 003594 534 YMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 613 (808)
Q Consensus 534 y~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla 613 (808)
|+. ++|.+++. ....+++..+..|+.||+.||.|||+ .+++||||||+||+++.++.+||+|||++
T Consensus 90 ~~~-~~L~~~~~----------~~~~l~~~~~~~i~~qi~~aL~~LH~---~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~ 155 (337)
T cd07858 90 LMD-TDLHQIIR----------SSQTLSDDHCQYFLYQLLRGLKYIHS---ANVLHRDLKPSNLLLNANCDLKICDFGLA 155 (337)
T ss_pred CCC-CCHHHHHh----------cCCCCCHHHHHHHHHHHHHHHHHHHh---CCEecCCCCHHHEEEcCCCCEEECcCccc
Confidence 996 78999883 44569999999999999999999999 56999999999999999999999999987
Q ss_pred cc--------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHh------------------h
Q 003594 614 IC--------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAM------------------A 649 (808)
Q Consensus 614 ~~--------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~------------------~ 649 (808)
.. ..++.++|||||||++|+|++|++||...+... .
T Consensus 156 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (337)
T cd07858 156 RTTSEKGDFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEEDLGF 235 (337)
T ss_pred cccCCCcccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHHhhh
Confidence 52 135678999999999999999999985321100 0
Q ss_pred hcHHHHHHHhcc--CC-----CCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 650 LDQTTLMQVLDG--NA-----GIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 650 ~~~~~~~~~ld~--~~-----~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
.........+.. .. ......++..+.+|+.+||+.+ |.+||++.+++..
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~--P~~Rps~~ell~h 291 (337)
T cd07858 236 IRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFD--PSKRITVEEALAH 291 (337)
T ss_pred cCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCC--hhhccCHHHHHcC
Confidence 000000111100 00 0112356788999999999999 9999999999876
No 340
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=9.1e-30 Score=276.72 Aligned_cols=224 Identities=18% Similarity=0.274 Sum_probs=176.6
Q ss_pred HHHhhccccccccccccCCceEEEEEEE-CCeEEEEEEcc----CCCCHHHHHHHHHHHhcc-CCCCccceeeccc--cc
Q 003594 456 IRLATEDFSERFRLKCAGDWTNVYRGRL-NHASVAIKTLN----NGLSEEDFQAKVSFLTAV-RHPHLVAVMGCCS--EL 527 (808)
Q Consensus 456 i~~at~~f~~~~~i~g~G~~g~Vy~~~~-~~~~vAiK~l~----~~~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~--~~ 527 (808)
+....+.-++.++.+|.||.+.||++.. +.+.||+|++. +......|.+|+.+|.+| .|.+||+||+|-. +.
T Consensus 355 ~i~Vkg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~ 434 (677)
T KOG0596|consen 355 IIKVKGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGY 434 (677)
T ss_pred eEEECcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCce
Confidence 3333444566678889999999999998 55788888876 333457899999999999 5999999999864 38
Q ss_pred eEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEE
Q 003594 528 KCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKI 607 (808)
Q Consensus 528 ~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl 607 (808)
+||||||-+ .+|..+|... ......| .+..|..|++.|+.++|.+ ||||.||||.|+|+ -.|.+||
T Consensus 435 lYmvmE~Gd-~DL~kiL~k~--------~~~~~~~-~lk~ywkqML~aV~~IH~~---gIVHSDLKPANFLl-VkG~LKL 500 (677)
T KOG0596|consen 435 LYMVMECGD-IDLNKILKKK--------KSIDPDW-FLKFYWKQMLLAVKTIHQH---GIVHSDLKPANFLL-VKGRLKL 500 (677)
T ss_pred EEEEeeccc-ccHHHHHHhc--------cCCCchH-HHHHHHHHHHHHHHHHHHh---ceeecCCCcccEEE-EeeeEEe
Confidence 899999985 7999999654 2223335 6778999999999999994 59999999999999 4679999
Q ss_pred EeCCCccc--------------------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhh
Q 003594 608 SGLGLNIC--------------------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMA 649 (808)
Q Consensus 608 ~DfGla~~--------------------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~ 649 (808)
+|||+|.. -..+.+|||||||||||+|+.|++||+....
T Consensus 501 IDFGIA~aI~~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n--- 577 (677)
T KOG0596|consen 501 IDFGIANAIQPDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIIN--- 577 (677)
T ss_pred eeechhcccCccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHH---
Confidence 99999853 0156899999999999999999999987542
Q ss_pred hcHHHHHHHhccC-CCCCChhhH-HHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 650 LDQTTLMQVLDGN-AGIWPLDLA-EELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 650 ~~~~~~~~~ld~~-~~~~p~~~~-~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
....+..+.++. .-++|..-. .++.+++..||..| |.+||++.++|.
T Consensus 578 -~~aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rd--PkkR~si~eLLq 626 (677)
T KOG0596|consen 578 -QIAKLHAITDPNHEIEFPDIPENDELIDVMKCCLARD--PKKRWSIPELLQ 626 (677)
T ss_pred -HHHHHHhhcCCCccccccCCCCchHHHHHHHHHHhcC--cccCCCcHHHhc
Confidence 234456666762 233443222 23999999999999 999999988874
No 341
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.96 E-value=4.4e-29 Score=263.89 Aligned_cols=215 Identities=20% Similarity=0.290 Sum_probs=172.2
Q ss_pred cccccCCceEEEEEEEC--CeEEEEEEccC-------CCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecC
Q 003594 468 RLKCAGDWTNVYRGRLN--HASVAIKTLNN-------GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMP 536 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~~--~~~vAiK~l~~-------~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~ 536 (808)
+.+|+|+||.||++.+. +..+++|+++. ......+..|+.++++++||||+++++++.+ ..++||||++
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 85 (260)
T cd08222 6 QRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCIITEYCE 85 (260)
T ss_pred eeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEEEEeCC
Confidence 45789999999999883 45566666551 1123457789999999999999999999865 7899999999
Q ss_pred CCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-
Q 003594 537 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC- 615 (808)
Q Consensus 537 ~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~- 615 (808)
+++|.+++.... .....+++..++.++.|++.||.|||+ .+++|+||||+||+++. +.+||+|||++..
T Consensus 86 ~~~l~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~l~~lH~---~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~ 155 (260)
T cd08222 86 GRDLDCKLEELK------HTGKTLSENQVCEWFIQLLLGVHYMHQ---RRILHRDLKAKNIFLKN-NLLKIGDFGVSRLL 155 (260)
T ss_pred CCCHHHHHHHHh------hcccccCHHHHHHHHHHHHHHHHHHHH---cCccccCCChhheEeec-CCEeecccCceeec
Confidence 999999986431 234679999999999999999999999 66999999999999975 5699999998642
Q ss_pred ------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhH
Q 003594 616 ------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLA 671 (808)
Q Consensus 616 ------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~ 671 (808)
..++.++|+||||+++|+|++|..||.... .......+.....+..+..++
T Consensus 156 ~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 230 (260)
T cd08222 156 MGSCDLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN-----FLSVVLRIVEGPTPSLPETYS 230 (260)
T ss_pred CCCcccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-----HHHHHHHHHcCCCCCCcchhc
Confidence 124568999999999999999999986421 112223333444455566788
Q ss_pred HHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 672 EELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 672 ~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
.++.+++.+||..+ |..||++.++++
T Consensus 231 ~~~~~li~~~l~~~--p~~Rp~~~~il~ 256 (260)
T cd08222 231 RQLNSIMQSMLNKD--PSLRPSAAEILR 256 (260)
T ss_pred HHHHHHHHHHhcCC--hhhCcCHHHHhh
Confidence 89999999999999 999999999875
No 342
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.96 E-value=1.2e-29 Score=259.29 Aligned_cols=227 Identities=21% Similarity=0.282 Sum_probs=185.0
Q ss_pred CHHHHHHhhccccccccccccCCceEEEEEEE--CCeEEEEEEcc--CCCCHHHHHHHHHHHhcc-CCCCccceeecccc
Q 003594 452 AAEDIRLATEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLN--NGLSEEDFQAKVSFLTAV-RHPHLVAVMGCCSE 526 (808)
Q Consensus 452 ~~~ei~~at~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~--~~~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~ 526 (808)
+|.|+...|+. ++|.|+|+.|-.+.. +|..+|||++. ......++.+|++++.+. .|+||++|+.+|.+
T Consensus 74 ~F~d~YkLt~e------~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEd 147 (463)
T KOG0607|consen 74 KFEDMYKLTSE------LLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFED 147 (463)
T ss_pred hHHHHHHhHHH------HhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhcc
Confidence 45666655543 679999999998886 89999999998 445568899999999999 59999999999977
Q ss_pred --ceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCC--
Q 003594 527 --LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRN-- 602 (808)
Q Consensus 527 --~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~-- 602 (808)
.+|||||-|.||+|..+|. ....+++..+.++..+|+.||.|||. +||.||||||+|||....
T Consensus 148 d~~FYLVfEKm~GGplLshI~----------~~~~F~E~EAs~vvkdia~aLdFlH~---kgIAHRDlKPENiLC~~pn~ 214 (463)
T KOG0607|consen 148 DTRFYLVFEKMRGGPLLSHIQ----------KRKHFNEREASRVVKDIASALDFLHT---KGIAHRDLKPENILCESPNK 214 (463)
T ss_pred cceEEEEEecccCchHHHHHH----------HhhhccHHHHHHHHHHHHHHHHHHhh---cCcccccCCccceeecCCCC
Confidence 7899999999999999994 45679999999999999999999999 789999999999999654
Q ss_pred -ccEEEEeCCCccc-------------------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhh
Q 003594 603 -LVAKISGLGLNIC-------------------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLV 644 (808)
Q Consensus 603 -~~~kl~DfGla~~-------------------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~ 644 (808)
.-+|||||.+... ..|+.++|.||||||||-|++|.+||...
T Consensus 215 vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~ 294 (463)
T KOG0607|consen 215 VSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGH 294 (463)
T ss_pred cCceeeeccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCc
Confidence 3589999998632 23789999999999999999999999531
Q ss_pred -----HH----HhhhcHHHHHHHhccCCCCCCh----hhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 645 -----EK----AMALDQTTLMQVLDGNAGIWPL----DLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 645 -----~~----~~~~~~~~~~~~ld~~~~~~p~----~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
.| ....-+..+.+-+......+|. .++.+..+|+...|..| +..|.++.+++.
T Consensus 295 Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrd--a~~rlsa~~vln 360 (463)
T KOG0607|consen 295 CGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRD--AKQRLSAAQVLN 360 (463)
T ss_pred cCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhcc--HHhhhhhhhccC
Confidence 11 1112233344444444445554 57889999999999999 889999888875
No 343
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.96 E-value=8.6e-30 Score=281.90 Aligned_cols=218 Identities=20% Similarity=0.285 Sum_probs=179.6
Q ss_pred cccccccccccCCceEEEEEEE--CCeEEEEEEccCCC----CHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEe
Q 003594 462 DFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNGL----SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFE 533 (808)
Q Consensus 462 ~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~----~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~E 533 (808)
+++...+.+|+|.|+.|.++.. ++..||||.+.... ....+.+|+++|..|+|||||+++.+... .+|+|||
T Consensus 56 g~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lylV~e 135 (596)
T KOG0586|consen 56 GLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYLVME 135 (596)
T ss_pred cceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEEEEE
Confidence 4555567789999999999998 78999999998322 23458999999999999999999999854 8999999
Q ss_pred ecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCc
Q 003594 534 YMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 613 (808)
Q Consensus 534 y~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla 613 (808)
|+.+|.++++|..+ ..+....+..++.|+.+|++|+|+ +.|+|||||++||||+.+.++||+|||++
T Consensus 136 ya~~ge~~~yl~~~----------gr~~e~~ar~~F~q~vsaveYcH~---k~ivHrdLk~eNilL~~~mnikIaDfgfS 202 (596)
T KOG0586|consen 136 YASGGELFDYLVKH----------GRMKEKEARAKFRQIVSAVEYCHS---KNIVHRDLKAENILLDENMNIKIADFGFS 202 (596)
T ss_pred eccCchhHHHHHhc----------ccchhhhhhhhhHHHHHHHHHHhh---cceeccccchhhcccccccceeeeccccc
Confidence 99999999999543 456668888999999999999999 66999999999999999999999999998
Q ss_pred cc-------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCCh
Q 003594 614 IC-------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPL 668 (808)
Q Consensus 614 ~~-------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~ 668 (808)
.. ...++.+|+||+|++||-|+.|..||+...- ..+..-+-.....+|.
T Consensus 203 ~~~~~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~l------k~Lr~rvl~gk~rIp~ 276 (596)
T KOG0586|consen 203 TFFDYGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNL------KELRPRVLRGKYRIPF 276 (596)
T ss_pred eeecccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccc------ccccchheeeeecccc
Confidence 54 2357899999999999999999999975211 0111111112234566
Q ss_pred hhHHHHHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 669 DLAEELAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 669 ~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
-.+.+..+|+.++|..+ |+.|+++.++.+.
T Consensus 277 ~ms~dce~lLrk~lvl~--Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 277 YMSCDCEDLLRKFLVLN--PSKRGPCDQIMKD 306 (596)
T ss_pred eeechhHHHHHHhhccC--ccccCCHHHhhhh
Confidence 67889999999999999 9999999988753
No 344
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.96 E-value=4.8e-29 Score=271.28 Aligned_cols=213 Identities=22% Similarity=0.323 Sum_probs=170.8
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCC--C---CHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCC
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNG--L---SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNG 538 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~--~---~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~g 538 (808)
+.+|.|+||.||+|.. ++..||+|.+... . ....+.+|+.+++.++|||++++++++.+ ..++||||+. |
T Consensus 21 ~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~ 99 (308)
T cd06634 21 REIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL-G 99 (308)
T ss_pred HheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEEEccC-C
Confidence 4568899999999998 5789999998621 1 13467889999999999999999999855 6889999996 6
Q ss_pred CHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc---
Q 003594 539 NLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC--- 615 (808)
Q Consensus 539 sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~--- 615 (808)
+|.+.+.. ....+++..+..++.|++.||.|||+ .+++||||||+|||++.++.+||+|||++..
T Consensus 100 ~l~~~~~~---------~~~~l~~~~~~~~~~~l~~~l~~LH~---~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~ 167 (308)
T cd06634 100 SASDLLEV---------HKKPLQEVEIAAVTHGALQGLAYLHS---HNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 167 (308)
T ss_pred CHHHHHHH---------cCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHhEEECCCCcEEECCcccceeecC
Confidence 88887742 23458999999999999999999999 5699999999999999999999999998752
Q ss_pred ---------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCC-CChhhHHH
Q 003594 616 ---------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGI-WPLDLAEE 673 (808)
Q Consensus 616 ---------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~-~p~~~~~~ 673 (808)
..++.++|||||||++|+|++|.+||..... ......+.....+. .+..++..
T Consensus 168 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 242 (308)
T cd06634 168 ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA-----MSALYHIAQNESPALQSGHWSEY 242 (308)
T ss_pred cccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccH-----HHHHHHHhhcCCCCcCcccccHH
Confidence 1356789999999999999999999864321 11112222222222 23357788
Q ss_pred HHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 674 LAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 674 l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
+.+|+.+||..+ |..||++.+++..
T Consensus 243 ~~~li~~cl~~~--P~~Rp~~~~ll~~ 267 (308)
T cd06634 243 FRNFVDSCLQKI--PQDRPTSEVLLKH 267 (308)
T ss_pred HHHHHHHHhhCC--cccCCCHHHHhhC
Confidence 999999999999 9999999988865
No 345
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.96 E-value=6.7e-29 Score=267.76 Aligned_cols=218 Identities=17% Similarity=0.256 Sum_probs=168.4
Q ss_pred cccccccccccCCceEEEEEEE--CCeEEEEEEccCC----CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEe
Q 003594 462 DFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNG----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFE 533 (808)
Q Consensus 462 ~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~E 533 (808)
+|... ..+|.|+||.||+|.+ +|+.||+|.+... .....+.+|+.++++++||||+++++++.+ ..|+|||
T Consensus 3 ~y~~~-~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 3 QYEKV-EKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred ceEEE-EEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 34443 4557899999999998 5789999998722 223578899999999999999999999865 7899999
Q ss_pred ecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCC-CccEEEEeCCC
Q 003594 534 YMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDR-NLVAKISGLGL 612 (808)
Q Consensus 534 y~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~-~~~~kl~DfGl 612 (808)
|++ ++|.+++... ....+++.....++.||+.||.|||+ .+|+||||+|+||+++. ++.+||+|||+
T Consensus 82 ~~~-~~l~~~~~~~--------~~~~~~~~~~~~~~~qi~~aL~~LH~---~~i~H~dl~p~nill~~~~~~~kl~dfg~ 149 (294)
T PLN00009 82 YLD-LDLKKHMDSS--------PDFAKNPRLIKTYLYQILRGIAYCHS---HRVLHRDLKPQNLLIDRRTNALKLADFGL 149 (294)
T ss_pred ccc-ccHHHHHHhC--------CCCCcCHHHHHHHHHHHHHHHHHHHh---CCeeCCCCCcceEEEECCCCEEEEccccc
Confidence 996 6888887432 23346888889999999999999999 56999999999999985 56799999998
Q ss_pred ccc--------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhc----c-
Q 003594 613 NIC--------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLD----G- 661 (808)
Q Consensus 613 a~~--------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld----~- 661 (808)
+.. ..++.++|||||||++|+|+||++||...... ..+..+.. +
T Consensus 150 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~-----~~~~~~~~~~~~~~ 224 (294)
T PLN00009 150 ARAFGIPVRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEI-----DELFKIFRILGTPN 224 (294)
T ss_pred ccccCCCccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHHHhCCCC
Confidence 742 12467899999999999999999998643211 01111100 0
Q ss_pred ---------------CCCC--------CChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 662 ---------------NAGI--------WPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 662 ---------------~~~~--------~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
.... .....+..+.+++.+||..+ |..||++.+++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~--P~~Rps~~~~l~ 283 (294)
T PLN00009 225 EETWPGVTSLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLD--PSKRITARAALE 283 (294)
T ss_pred hhhccccccchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCC--hhhCcCHHHHhc
Confidence 0000 11245678999999999999 999999999885
No 346
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.96 E-value=5.1e-29 Score=275.31 Aligned_cols=235 Identities=18% Similarity=0.283 Sum_probs=175.4
Q ss_pred cCHHHHHHhh----ccccccccccccCCceEEEEEEE--CCeEEEEEEccCC----CCHHHHHHHHHHHhccCCCCccce
Q 003594 451 YAAEDIRLAT----EDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNG----LSEEDFQAKVSFLTAVRHPHLVAV 520 (808)
Q Consensus 451 ~~~~ei~~at----~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~----~~~~~~~~Ei~il~~l~HpnIv~l 520 (808)
|+..|+..++ ++|.. ...+|.|+||.||+|.+ +|..||||++... .....+.+|+.+++.++||||+++
T Consensus 1 ~~~~~~~~~~~~~~~~y~~-~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~ 79 (342)
T cd07879 1 FYREEVNKTVWELPERYTS-LKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGL 79 (342)
T ss_pred CchhhhhhhhhccccceEE-EEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccch
Confidence 3445555554 45543 45678999999999997 6899999998732 123568899999999999999999
Q ss_pred eecccc--------ceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCC
Q 003594 521 MGCCSE--------LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSL 592 (808)
Q Consensus 521 ~g~~~~--------~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDL 592 (808)
+++|.. ..++|+||+. ++|..++ ...+++..+..++.|++.||.|||+ .+|+||||
T Consensus 80 ~~~~~~~~~~~~~~~~~lv~e~~~-~~l~~~~------------~~~~~~~~~~~~~~qi~~aL~~LH~---~~i~H~dl 143 (342)
T cd07879 80 LDVFTSAVSGDEFQDFYLVMPYMQ-TDLQKIM------------GHPLSEDKVQYLVYQMLCGLKYIHS---AGIIHRDL 143 (342)
T ss_pred hheecccccCCCCceEEEEecccc-cCHHHHH------------cCCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCC
Confidence 998753 3589999996 4777665 1358899999999999999999999 56999999
Q ss_pred CCCCcccCCCccEEEEeCCCccc-----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhh
Q 003594 593 TPSSILLDRNLVAKISGLGLNIC-----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMA 649 (808)
Q Consensus 593 Kp~NILld~~~~~kl~DfGla~~-----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~ 649 (808)
||+|||++.++.+||+|||+++. ..++.++|||||||++|+|++|+.||........
T Consensus 144 kp~NIll~~~~~~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~ 223 (342)
T cd07879 144 KPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQ 223 (342)
T ss_pred CHHHEEECCCCCEEEeeCCCCcCCCCCCCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence 99999999999999999998743 1356789999999999999999999964221000
Q ss_pred hc---------HHHHHH---------HhccC----CCC---CChhhHHHHHHHHHHhhccCCCcCccccHHhhHHH--HH
Q 003594 650 LD---------QTTLMQ---------VLDGN----AGI---WPLDLAEELAGIALKCLSADQDANRDLRIAGVMKE--LD 702 (808)
Q Consensus 650 ~~---------~~~~~~---------~ld~~----~~~---~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~--L~ 702 (808)
.. ...+.. ..... ... ..+..+..+.+|+.+||+.| |..||++.+++.. ++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d--P~~R~~~~e~l~h~~f~ 301 (342)
T cd07879 224 LTQILKVTGVPGPEFVQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELD--VDKRLTATEALEHPYFD 301 (342)
T ss_pred HHHHHHhcCCCCHHHHHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCC--hhhCcCHHHHhcCcchh
Confidence 00 000000 00000 000 01134567899999999999 9999999999853 54
Q ss_pred HH
Q 003594 703 EV 704 (808)
Q Consensus 703 ~l 704 (808)
.+
T Consensus 302 ~~ 303 (342)
T cd07879 302 SF 303 (342)
T ss_pred hc
Confidence 44
No 347
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=99.96 E-value=4.8e-29 Score=271.21 Aligned_cols=221 Identities=19% Similarity=0.272 Sum_probs=168.5
Q ss_pred cccccCCceEEEEEEE----CCeEEEEEEccC-----CCCHHHHHHHHHHHhccCCCCccceeecccc----ceEEEEee
Q 003594 468 RLKCAGDWTNVYRGRL----NHASVAIKTLNN-----GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE----LKCIVFEY 534 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~----~~~~vAiK~l~~-----~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~----~~~lV~Ey 534 (808)
..+|+|+||.||+|.. ++..||+|.+.. ......+.+|+.++.+++||||++++++|.+ ..++||||
T Consensus 6 ~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~ 85 (316)
T cd07842 6 GCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVYLLFDY 85 (316)
T ss_pred EEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEEEEEeC
Confidence 4568899999999998 468999999984 2234678899999999999999999999854 58999999
Q ss_pred cCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCC----CccEEEEeC
Q 003594 535 MPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDR----NLVAKISGL 610 (808)
Q Consensus 535 ~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~----~~~~kl~Df 610 (808)
++ ++|.+.+..... .....+++..++.|+.||+.||.|||+ .+|+||||||+|||++. ++.+||+||
T Consensus 86 ~~-~~l~~~~~~~~~-----~~~~~~~~~~~~~i~~qi~~~l~~lH~---~~i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 86 AE-HDLWQIIKFHRQ-----AKRVSIPPSMVKSLLWQILNGVHYLHS---NWVLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred CC-cCHHHHHHhhcc-----CCCcCcCHHHHHHHHHHHHHHHHHHHh---CCEeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 97 578777754321 122478999999999999999999999 66999999999999999 999999999
Q ss_pred CCccc-----------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhh----hcHHHHHH
Q 003594 611 GLNIC-----------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMA----LDQTTLMQ 657 (808)
Q Consensus 611 Gla~~-----------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~----~~~~~~~~ 657 (808)
|++.. ..++.++|||||||++|+|++|++||........ .....+..
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER 236 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence 98642 1256789999999999999999999863221100 00000000
Q ss_pred H---h----------------------ccCCCCCC-----------hhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 658 V---L----------------------DGNAGIWP-----------LDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 658 ~---l----------------------d~~~~~~p-----------~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
+ + ......++ ...+..+.+++.+||..| |..|||+.+++.
T Consensus 237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~--P~~Rps~~eil~ 312 (316)
T cd07842 237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYD--PTKRITAEEALE 312 (316)
T ss_pred HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCC--cccCcCHHHHhc
Confidence 0 0 00011111 034567899999999999 999999999874
No 348
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.96 E-value=5.3e-29 Score=275.55 Aligned_cols=235 Identities=18% Similarity=0.248 Sum_probs=178.7
Q ss_pred ccccCHHHHHHhhccccccccccccCCceEEEEEEE--CCeEEEEEEccCCC----CHHHHHHHHHHHhccCCCCcccee
Q 003594 448 FREYAAEDIRLATEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNGL----SEEDFQAKVSFLTAVRHPHLVAVM 521 (808)
Q Consensus 448 ~~~~~~~ei~~at~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~----~~~~~~~Ei~il~~l~HpnIv~l~ 521 (808)
++.....++...+++|... ..+|+|+||.||+|.. ++..||+|++.... ..+.+.+|+.++.+++||||++++
T Consensus 4 ~~~~~~~~~~~~~~~y~~~-~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~ 82 (345)
T cd07877 4 YRQELNKTIWEVPERYQNL-SPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLL 82 (345)
T ss_pred chhhHHHHHhhccCceEEE-EEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCccccee
Confidence 3445566777788888765 5667999999999987 68899999987321 235688899999999999999999
Q ss_pred ecccc--------ceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCC
Q 003594 522 GCCSE--------LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLT 593 (808)
Q Consensus 522 g~~~~--------~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLK 593 (808)
+++.. ..|++++++ +++|.+++. ...+++..+..++.||+.||.|||+ .+|+|||||
T Consensus 83 ~~~~~~~~~~~~~~~~lv~~~~-~~~L~~~~~-----------~~~l~~~~~~~i~~qi~~aL~~LH~---~~ivH~dlk 147 (345)
T cd07877 83 DVFTPARSLEEFNDVYLVTHLM-GADLNNIVK-----------CQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLK 147 (345)
T ss_pred eeeeecccccccccEEEEehhc-ccCHHHHHh-----------cCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCC
Confidence 98742 367888887 789988873 2358999999999999999999999 569999999
Q ss_pred CCCcccCCCccEEEEeCCCccc-----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhh
Q 003594 594 PSSILLDRNLVAKISGLGLNIC-----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMAL 650 (808)
Q Consensus 594 p~NILld~~~~~kl~DfGla~~-----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~ 650 (808)
|+||+++.++.+||+|||++.. ..++.++|||||||++|+|++|++||.........
T Consensus 148 p~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~ 227 (345)
T cd07877 148 PSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQL 227 (345)
T ss_pred hHHEEEcCCCCEEEecccccccccccccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHH
Confidence 9999999999999999998743 13567899999999999999999998532110000
Q ss_pred c----------HHHH--------HHHhc--cCCC-----CCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 651 D----------QTTL--------MQVLD--GNAG-----IWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 651 ~----------~~~~--------~~~ld--~~~~-----~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
. .... ...+. +..+ ......+..+.+++.+||+.| |..||++.+++..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d--p~~R~t~~e~l~h 300 (345)
T cd07877 228 KLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLD--SDKRITAAQALAH 300 (345)
T ss_pred HHHHHHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCC--hhhcCCHHHHhcC
Confidence 0 0000 00000 0000 011134678899999999999 9999998888754
No 349
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.96 E-value=4.4e-29 Score=269.82 Aligned_cols=218 Identities=16% Similarity=0.145 Sum_probs=159.6
Q ss_pred cccccccCCceEEEEEEEC-----CeEEEEEEccCCCC---H----------HHHHHHHHHHhccCCCCccceeecccc-
Q 003594 466 RFRLKCAGDWTNVYRGRLN-----HASVAIKTLNNGLS---E----------EDFQAKVSFLTAVRHPHLVAVMGCCSE- 526 (808)
Q Consensus 466 ~~~i~g~G~~g~Vy~~~~~-----~~~vAiK~l~~~~~---~----------~~~~~Ei~il~~l~HpnIv~l~g~~~~- 526 (808)
..+++|+|+||.||+|.+. +..+|+|+...... . .....+...+..+.|+||+++++++..
T Consensus 16 i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~ 95 (294)
T PHA02882 16 IDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGCGSFK 95 (294)
T ss_pred EeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEeeeEe
Confidence 3456789999999999983 34677776541111 0 112233445567799999999987643
Q ss_pred -----ceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCC
Q 003594 527 -----LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDR 601 (808)
Q Consensus 527 -----~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~ 601 (808)
..+++++++. .++.+.+. .....++..+..|+.|++.||.|||+ .+|+||||||+|||++.
T Consensus 96 ~~~~~~~~~~~~~~~-~~~~~~~~----------~~~~~~~~~~~~i~~qi~~~l~~lH~---~~iiHrDiKp~Nill~~ 161 (294)
T PHA02882 96 RCRMYYRFILLEKLV-ENTKEIFK----------RIKCKNKKLIKNIMKDMLTTLEYIHE---HGISHGDIKPENIMVDG 161 (294)
T ss_pred cCCceEEEEEEehhc-cCHHHHHH----------hhccCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcC
Confidence 3478888875 57777763 22346788899999999999999999 66999999999999999
Q ss_pred CccEEEEeCCCccc--------------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhh
Q 003594 602 NLVAKISGLGLNIC--------------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMA 649 (808)
Q Consensus 602 ~~~~kl~DfGla~~--------------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~ 649 (808)
++.+||+|||+|+. ..++.++|||||||+||||++|.+||........
T Consensus 162 ~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~ 241 (294)
T PHA02882 162 NNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGN 241 (294)
T ss_pred CCcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchH
Confidence 99999999999742 2357889999999999999999999965421100
Q ss_pred ----hcHHHHHHHhccCCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHH
Q 003594 650 ----LDQTTLMQVLDGNAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKEL 701 (808)
Q Consensus 650 ----~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L 701 (808)
........+..+. ..+..++..+.+++..|+..+ |..||++.++++.|
T Consensus 242 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~rp~~~~l~~~~ 293 (294)
T PHA02882 242 LIHAAKCDFIKRLHEGK--IKIKNANKFIYDFIECVTKLS--YEEKPDYDALIKIF 293 (294)
T ss_pred HHHHhHHHHHHHhhhhh--hccCCCCHHHHHHHHHHHhCC--CCCCCCHHHHHHhh
Confidence 0111112222211 112345788999999999999 99999999998876
No 350
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.96 E-value=5.8e-29 Score=266.12 Aligned_cols=216 Identities=19% Similarity=0.269 Sum_probs=168.7
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccCCC----CHHHHHHHHHHHhccCCCCccceeecccc----ceEEEEeecC
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNNGL----SEEDFQAKVSFLTAVRHPHLVAVMGCCSE----LKCIVFEYMP 536 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~----~~~~~~~Ei~il~~l~HpnIv~l~g~~~~----~~~lV~Ey~~ 536 (808)
.+.+|.|+||.||+|.. ++..||+|++.... ....+.+|+.+++.++|||++++++++.+ ..++||||++
T Consensus 4 ~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e~~~ 83 (287)
T cd07840 4 IAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFEYMD 83 (287)
T ss_pred eEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEecccc
Confidence 34568899999999998 46899999998332 23568899999999999999999999854 5899999997
Q ss_pred CCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-
Q 003594 537 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC- 615 (808)
Q Consensus 537 ~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~- 615 (808)
++|.+++.. ....+++..++.++.||+.||.|||+ .+++|+||+|+|||+++++.+||+|||++..
T Consensus 84 -~~l~~~~~~---------~~~~~~~~~~~~i~~~i~~al~~LH~---~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~ 150 (287)
T cd07840 84 -HDLTGLLDS---------PEVKFTESQIKCYMKQLLEGLQYLHS---NGILHRDIKGSNILINNDGVLKLADFGLARPY 150 (287)
T ss_pred -ccHHHHHhc---------cCCCCCHHHHHHHHHHHHHHHHHHHH---CCceeccCcHHHeEEcCCCCEEEccccceeec
Confidence 589988842 22578999999999999999999999 5699999999999999999999999998742
Q ss_pred --------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhc-cCC-----
Q 003594 616 --------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLD-GNA----- 663 (808)
Q Consensus 616 --------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld-~~~----- 663 (808)
..++.++||||||+++|+|+||++||......... ........ +..
T Consensus 151 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 228 (287)
T cd07840 151 TKRNSADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQL--EKIFELCGSPTDENWPG 228 (287)
T ss_pred cCCCcccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHH--HHHHHHhCCCchhhccc
Confidence 12467899999999999999999998642211000 00000000 000
Q ss_pred -------------CC--------CChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 664 -------------GI--------WPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 664 -------------~~--------~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
.. +...++..+.+++.+||..+ |..||++.+++.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~--P~~Rp~~~~~l~ 283 (287)
T cd07840 229 VSKLPWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLD--PKKRISADQALQ 283 (287)
T ss_pred cccchhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCC--hhhCcCHHHHhh
Confidence 00 00113778999999999999 999999998875
No 351
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.96 E-value=5.5e-29 Score=268.96 Aligned_cols=215 Identities=18% Similarity=0.257 Sum_probs=170.6
Q ss_pred cccccCCceEEEEEEEC--CeEEEEEEccCCC---CHHHHHHHHHHHhccC-CCCccceeecccc--ceEEEEeecCCCC
Q 003594 468 RLKCAGDWTNVYRGRLN--HASVAIKTLNNGL---SEEDFQAKVSFLTAVR-HPHLVAVMGCCSE--LKCIVFEYMPNGN 539 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~~--~~~vAiK~l~~~~---~~~~~~~Ei~il~~l~-HpnIv~l~g~~~~--~~~lV~Ey~~~gs 539 (808)
..+|.|+||.||+|.+. +..||||.+.... ....+..|+.++.+.. ||||++++++|.+ ..|+||||+. ++
T Consensus 21 ~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~-~~ 99 (296)
T cd06618 21 GEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICMELMS-TC 99 (296)
T ss_pred eEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEeeccC-cC
Confidence 56688999999999994 8999999997322 2345677887777775 9999999999865 7899999985 57
Q ss_pred HHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc----
Q 003594 540 LRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC---- 615 (808)
Q Consensus 540 L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~---- 615 (808)
|.+++... ...+++..+..|+.||+.||.|||+. .+|+||||+|+||+++.++.+||+|||++..
T Consensus 100 l~~l~~~~---------~~~l~~~~~~~i~~~i~~~l~~lH~~--~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~ 168 (296)
T cd06618 100 LDKLLKRI---------QGPIPEDILGKMTVAIVKALHYLKEK--HGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDS 168 (296)
T ss_pred HHHHHHHh---------cCCCCHHHHHHHHHHHHHHHHHHHhh--CCEecCCCcHHHEEEcCCCCEEECccccchhccCC
Confidence 87777432 34799999999999999999999973 2699999999999999999999999998742
Q ss_pred ------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCC--hh
Q 003594 616 ------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWP--LD 669 (808)
Q Consensus 616 ------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p--~~ 669 (808)
..++.++||||||+++|+|++|+.||..... ....+..++......++ ..
T Consensus 169 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----~~~~~~~~~~~~~~~~~~~~~ 244 (296)
T cd06618 169 KAKTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKT----EFEVLTKILQEEPPSLPPNEG 244 (296)
T ss_pred CcccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchh----HHHHHHHHhcCCCCCCCCCCC
Confidence 1146689999999999999999999864221 11223333433322232 24
Q ss_pred hHHHHHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 670 LAEELAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 670 ~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
++.++.+|+.+||..| |..||++.+++..
T Consensus 245 ~~~~l~~li~~~l~~~--p~~Rp~~~~il~~ 273 (296)
T cd06618 245 FSPDFCSFVDLCLTKD--HRKRPKYRELLQH 273 (296)
T ss_pred CCHHHHHHHHHHccCC--hhhCCCHHHHhcC
Confidence 6789999999999999 9999999998865
No 352
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.96 E-value=4.3e-29 Score=279.15 Aligned_cols=167 Identities=25% Similarity=0.336 Sum_probs=143.8
Q ss_pred cccccccccCCceEEEEEEE--CCeEEEEEEccCCCC-HHHHHHHHHHHhccC-C-----CCccceeeccc--cceEEEE
Q 003594 464 SERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNGLS-EEDFQAKVSFLTAVR-H-----PHLVAVMGCCS--ELKCIVF 532 (808)
Q Consensus 464 ~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~~-~~~~~~Ei~il~~l~-H-----pnIv~l~g~~~--~~~~lV~ 532 (808)
++...++|+|+||.|-+|.+ +++.||||+++.... ..+-..|+.+|..|+ | -|+|+++++|. ++.|||+
T Consensus 188 Y~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~HlciVf 267 (586)
T KOG0667|consen 188 YEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCIVF 267 (586)
T ss_pred EEEEEEecccccceeEEEEecCCCcEEEEEeeccChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceeeee
Confidence 34567889999999999998 689999999984432 356677999999997 4 38999999984 4999999
Q ss_pred eecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCC--ccEEEEeC
Q 003594 533 EYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRN--LVAKISGL 610 (808)
Q Consensus 533 Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~--~~~kl~Df 610 (808)
|.+. .+|+++|+.. ....|+...+..|+.||+.||.+||. .+|||+||||+||||..- ..+||+||
T Consensus 268 ELL~-~NLYellK~n--------~f~Glsl~~ir~~~~Qil~~L~~L~~---l~IIHcDLKPENILL~~~~r~~vKVIDF 335 (586)
T KOG0667|consen 268 ELLS-TNLYELLKNN--------KFRGLSLPLVRKFAQQILTALLFLHE---LGIIHCDLKPENILLKDPKRSRIKVIDF 335 (586)
T ss_pred hhhh-hhHHHHHHhc--------CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeeeccCChhheeeccCCcCceeEEec
Confidence 9995 7999999764 45669999999999999999999999 569999999999999643 48999999
Q ss_pred CCccc----------------------CCCCcchhhHhHHHHHHHHHcCCCCch
Q 003594 611 GLNIC----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAG 642 (808)
Q Consensus 611 Gla~~----------------------~~~t~ksDVwS~Gvil~elltG~~P~~ 642 (808)
|.|.. ..|+.+.||||||||+.||++|.|.|.
T Consensus 336 GSSc~~~q~vytYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfp 389 (586)
T KOG0667|consen 336 GSSCFESQRVYTYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFP 389 (586)
T ss_pred ccccccCCcceeeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccC
Confidence 99854 468999999999999999999988664
No 353
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.96 E-value=5.7e-29 Score=265.19 Aligned_cols=210 Identities=24% Similarity=0.354 Sum_probs=174.0
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCC-----CCHHHHHHHHHHHhccC-CCCccceeecccc--ceEEEEeecCC
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNG-----LSEEDFQAKVSFLTAVR-HPHLVAVMGCCSE--LKCIVFEYMPN 537 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-----~~~~~~~~Ei~il~~l~-HpnIv~l~g~~~~--~~~lV~Ey~~~ 537 (808)
+.+|.|+||.||+|.. ++..||+|++... .....+.+|+.++.+++ ||||+++++++.+ ..++||||+++
T Consensus 7 ~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 86 (280)
T cd05581 7 KIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFVLEYAPN 86 (280)
T ss_pred eeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEEEcCCCC
Confidence 4568999999999998 6899999998731 22356889999999998 9999999999865 78999999999
Q ss_pred CCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--
Q 003594 538 GNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-- 615 (808)
Q Consensus 538 gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-- 615 (808)
++|.+++. ....+++..++.|+.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++..
T Consensus 87 ~~L~~~l~----------~~~~l~~~~~~~i~~ql~~~l~~Lh~---~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~ 153 (280)
T cd05581 87 GELLQYIR----------KYGSLDEKCTRFYAAEILLALEYLHS---KGIIHRDLKPENILLDKDMHIKITDFGTAKVLD 153 (280)
T ss_pred CcHHHHHH----------HcCCCCHHHHHHHHHHHHHHHHHHHH---CCeeecCCCHHHeEECCCCCEEecCCccccccC
Confidence 99999994 34479999999999999999999999 5699999999999999999999999998642
Q ss_pred -------------------------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcH
Q 003594 616 -------------------------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQ 652 (808)
Q Consensus 616 -------------------------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~ 652 (808)
..++.++||||||++++++++|++||..... .
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~-----~ 228 (280)
T cd05581 154 PNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNE-----Y 228 (280)
T ss_pred CccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccH-----H
Confidence 1245689999999999999999999975432 1
Q ss_pred HHHHHHhccCCCCCChhhHHHHHHHHHHhhccCCCcCccccH----HhhH
Q 003594 653 TTLMQVLDGNAGIWPLDLAEELAGIALKCLSADQDANRDLRI----AGVM 698 (808)
Q Consensus 653 ~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~----~evl 698 (808)
..+..+. .....+|...++.+.+++.+||..+ |..||++ .+++
T Consensus 229 ~~~~~~~-~~~~~~~~~~~~~~~~li~~~l~~~--p~~R~~~~~~~~~ll 275 (280)
T cd05581 229 LTFQKIL-KLEYSFPPNFPPDAKDLIEKLLVLD--PQDRLGVNEGYDELK 275 (280)
T ss_pred HHHHHHH-hcCCCCCCccCHHHHHHHHHHhcCC--HhhCCCcccCHHHHh
Confidence 1122222 2334556677889999999999999 9999999 5554
No 354
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.96 E-value=7.1e-29 Score=273.35 Aligned_cols=222 Identities=19% Similarity=0.292 Sum_probs=169.8
Q ss_pred ccccccccccccCCceEEEEEEE--CCeEEEEEEccC----CCCHHHHHHHHHHHhcc-CCCCccceeecccc----ceE
Q 003594 461 EDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN----GLSEEDFQAKVSFLTAV-RHPHLVAVMGCCSE----LKC 529 (808)
Q Consensus 461 ~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~----~~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~----~~~ 529 (808)
++|... +.+|.|+||.||+|.+ +|..||||++.. ......+.+|+.+++++ +||||++++++|.. ..|
T Consensus 7 ~~y~~~-~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~~ 85 (337)
T cd07852 7 RKYEIL-QKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDIY 85 (337)
T ss_pred hHHHHh-HhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceEE
Confidence 334433 4567899999999998 578999998852 22235677899999999 99999999998843 579
Q ss_pred EEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEe
Q 003594 530 IVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISG 609 (808)
Q Consensus 530 lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~D 609 (808)
+||||++ ++|..++. .. .++|..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|
T Consensus 86 lv~e~~~-~~L~~~~~----------~~-~~~~~~~~~i~~qi~~~L~~LH~---~~i~H~dl~p~nill~~~~~~kl~d 150 (337)
T cd07852 86 LVFEYME-TDLHAVIR----------AN-ILEDVHKRYIMYQLLKALKYIHS---GNVIHRDLKPSNILLNSDCRVKLAD 150 (337)
T ss_pred EEecccc-cCHHHHHh----------cC-CCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHEEEcCCCcEEEee
Confidence 9999997 69998883 22 68899999999999999999999 5699999999999999999999999
Q ss_pred CCCccc-------------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhh--------
Q 003594 610 LGLNIC-------------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMAL-------- 650 (808)
Q Consensus 610 fGla~~-------------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~-------- 650 (808)
||++.. ..++.++||||||+++|+|+||++||.........
T Consensus 151 ~g~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~ 230 (337)
T cd07852 151 FGLARSLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIG 230 (337)
T ss_pred ccchhccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhC
Confidence 998742 12456899999999999999999998532110000
Q ss_pred ----------cHHHHHHHhcc----C---CCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 651 ----------DQTTLMQVLDG----N---AGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 651 ----------~~~~~~~~ld~----~---~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
.......+++. . .......++.++.+++.+||+.+ |..||++.+++..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~--P~~Rps~~~il~~ 295 (337)
T cd07852 231 PPSAEDIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFN--PNKRLTAEEALEH 295 (337)
T ss_pred CCCHHHHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCC--cccccCHHHHhhC
Confidence 00000111110 0 01111235788999999999999 9999999999864
No 355
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.96 E-value=7e-29 Score=265.57 Aligned_cols=218 Identities=22% Similarity=0.253 Sum_probs=167.7
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCCC---CHHHHHHHHHHHhccC-CCCccceeecccc--ceEEEEeecCCCC
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNGL---SEEDFQAKVSFLTAVR-HPHLVAVMGCCSE--LKCIVFEYMPNGN 539 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~---~~~~~~~Ei~il~~l~-HpnIv~l~g~~~~--~~~lV~Ey~~~gs 539 (808)
+.+|.|+||.||+|.. ++..||||.+.... ......+|+..+.+++ ||||+++++++.+ ..++||||+ +|+
T Consensus 5 ~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~ 83 (283)
T cd07830 5 KQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM-EGN 83 (283)
T ss_pred eeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC-CCC
Confidence 4568899999999998 57899999987322 2334567999999999 9999999999865 789999999 789
Q ss_pred HHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc----
Q 003594 540 LRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC---- 615 (808)
Q Consensus 540 L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~---- 615 (808)
|.+++... ....+++..+..++.|++.||.|||+ .+++|+||+|+||+++.++.++|+|||++..
T Consensus 84 l~~~~~~~--------~~~~~~~~~~~~~~~~l~~~l~~Lh~---~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~ 152 (283)
T cd07830 84 LYQLMKDR--------KGKPFSESVIRSIIYQILQGLAHIHK---HGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSR 152 (283)
T ss_pred HHHHHHhc--------ccccCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChhhEEEcCCCCEEEeecccceeccCC
Confidence 99998533 23478999999999999999999999 5699999999999999999999999998742
Q ss_pred ---------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhh----------cHHHHH------HH
Q 003594 616 ---------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMAL----------DQTTLM------QV 658 (808)
Q Consensus 616 ---------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~----------~~~~~~------~~ 658 (808)
..++.++|+||||+++|+|++|++||......... ....+. ..
T Consensus 153 ~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (283)
T cd07830 153 PPYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLASK 232 (283)
T ss_pred CCcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhcc
Confidence 12467899999999999999999998542210000 000000 00
Q ss_pred hccC--------CCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 659 LDGN--------AGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 659 ld~~--------~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
.... ........+..+.+++.+||..+ |..||++.+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~--p~~Rpt~~ei~~ 279 (283)
T cd07830 233 LGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWD--PKKRPTASQALQ 279 (283)
T ss_pred ccccccccccccHHHHcccCCHHHHHHHHHhcccC--cccCCCHHHHhh
Confidence 0000 00011122578999999999999 999999998864
No 356
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.96 E-value=7.1e-29 Score=272.63 Aligned_cols=227 Identities=19% Similarity=0.255 Sum_probs=172.9
Q ss_pred HHHHhhccccccccccccCCceEEEEEEE--CCeEEEEEEccC----CCCHHHHHHHHHHHhccCCCCccceeecccc--
Q 003594 455 DIRLATEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN----GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE-- 526 (808)
Q Consensus 455 ei~~at~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~----~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-- 526 (808)
++...+++|... +.+|.|+||.||++.. ++..||||++.. ......+.+|+.++..++||||++++++|..
T Consensus 4 ~~~~~~~~y~~~-~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~ 82 (328)
T cd07856 4 TVFEITNRYVDL-QPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPL 82 (328)
T ss_pred ceeccccceEEE-EeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCC
Confidence 334456666554 6678899999999987 678999998762 2234678899999999999999999998843
Q ss_pred -ceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccE
Q 003594 527 -LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVA 605 (808)
Q Consensus 527 -~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~ 605 (808)
..++||||+ +++|.+++. ...+++.....++.|++.||.|||+ .+|+||||+|+|||++.++.+
T Consensus 83 ~~~~lv~e~~-~~~L~~~~~-----------~~~~~~~~~~~~~~ql~~aL~~LH~---~~iiH~dl~p~Nili~~~~~~ 147 (328)
T cd07856 83 EDIYFVTELL-GTDLHRLLT-----------SRPLEKQFIQYFLYQILRGLKYVHS---AGVVHRDLKPSNILINENCDL 147 (328)
T ss_pred CcEEEEeehh-ccCHHHHHh-----------cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEeECCCCCE
Confidence 688999999 578988883 2357888889999999999999999 669999999999999999999
Q ss_pred EEEeCCCccc-----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhh----------hcH
Q 003594 606 KISGLGLNIC-----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMA----------LDQ 652 (808)
Q Consensus 606 kl~DfGla~~-----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~----------~~~ 652 (808)
||+|||++.. ..++.++||||||+++|+|+||++||........ ...
T Consensus 148 ~l~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~ 227 (328)
T cd07856 148 KICDFGLARIQDPQMTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPD 227 (328)
T ss_pred EeCccccccccCCCcCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence 9999998742 1357789999999999999999999854221000 000
Q ss_pred HHH--------HHHhcc--CCCCCC-----hhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 653 TTL--------MQVLDG--NAGIWP-----LDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 653 ~~~--------~~~ld~--~~~~~p-----~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
... ..+... .....| ..++..+.++|.+||+.+ |..||++.+++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~--P~~R~t~~ell~ 287 (328)
T cd07856 228 DVINTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFD--PQKRISAAEALA 287 (328)
T ss_pred HHHHhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCC--hhhCCCHHHHhc
Confidence 000 000000 011111 235688999999999999 999999888754
No 357
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=9e-29 Score=265.27 Aligned_cols=227 Identities=24% Similarity=0.341 Sum_probs=178.3
Q ss_pred cccccCCceEEEEEEECCeEEEEEEccCCCCHHHHHHHHHHHhc--cCCCCccceeecccc------ceEEEEeecCCCC
Q 003594 468 RLKCAGDWTNVYRGRLNHASVAIKTLNNGLSEEDFQAKVSFLTA--VRHPHLVAVMGCCSE------LKCIVFEYMPNGN 539 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~~~~~vAiK~l~~~~~~~~~~~Ei~il~~--l~HpnIv~l~g~~~~------~~~lV~Ey~~~gs 539 (808)
.++|+|.||.||+|.++++.||||++. ....+.|++|-+|.+. +.|+||++++++-.. .++||++|.++||
T Consensus 216 eli~~Grfg~V~KaqL~~~~VAVKifp-~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt~fh~kGs 294 (534)
T KOG3653|consen 216 ELIGRGRFGCVWKAQLDNRLVAVKIFP-EQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVTEFHPKGS 294 (534)
T ss_pred HHhhcCccceeehhhccCceeEEEecC-HHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEeeeccCCc
Confidence 467899999999999999999999996 3445789999888775 489999999998632 6899999999999
Q ss_pred HHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCC------CCeEecCCCCCCcccCCCccEEEEeCCCc
Q 003594 540 LRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEP------RPIVHGSLTPSSILLDRNLVAKISGLGLN 613 (808)
Q Consensus 540 L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~------~~iiHrDLKp~NILld~~~~~kl~DfGla 613 (808)
|.++|. ...++|....+|+..+++||+|||+.-| ++|+|||||..||||..|+++.|+|||+|
T Consensus 295 L~dyL~-----------~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLA 363 (534)
T KOG3653|consen 295 LCDYLK-----------ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLA 363 (534)
T ss_pred HHHHHH-----------hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecccee
Confidence 999994 3469999999999999999999998643 47999999999999999999999999998
Q ss_pred cc--------------------------CC--C-----CcchhhHhHHHHHHHHHcCCCCc--------hhhHHHhh---
Q 003594 614 IC--------------------------DQ--L-----NVRSDIRAFGTLLLHLLTGRNWA--------GLVEKAMA--- 649 (808)
Q Consensus 614 ~~--------------------------~~--~-----t~ksDVwS~Gvil~elltG~~P~--------~~~~~~~~--- 649 (808)
.. +. + -.+.||||+|.|||||++...-+ ...-....
T Consensus 364 l~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~h 443 (534)
T KOG3653|consen 364 LRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNH 443 (534)
T ss_pred EEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCC
Confidence 53 00 1 14689999999999999875322 11111000
Q ss_pred hcHHHHHH--HhccCCCCCChh-----hHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHHHHhc
Q 003594 650 LDQTTLMQ--VLDGNAGIWPLD-----LAEELAGIALKCLSADQDANRDLRIAGVMKELDEVRKKA 708 (808)
Q Consensus 650 ~~~~~~~~--~ld~~~~~~p~~-----~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~~~~ 708 (808)
..-+.+.. +-+..++.+|.. ....+.+.+..||..| +..|.|+.-|.+.+..+....
T Consensus 444 Pt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhD--aeARLTA~Cv~eR~~~l~~~~ 507 (534)
T KOG3653|consen 444 PTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHD--AEARLTAGCVEERMAELMMLW 507 (534)
T ss_pred CCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCc--hhhhhhhHHHHHHHHHHhccC
Confidence 01122222 223355666643 4567899999999999 999999999988888886543
No 358
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.96 E-value=1.5e-28 Score=262.54 Aligned_cols=217 Identities=19% Similarity=0.246 Sum_probs=169.7
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCCC----CHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCC
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNGL----SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGN 539 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~----~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gs 539 (808)
+.+|.|++|.||+|.. ++..+++|.+.... ....+.+|+.++++++||||+++++++.. ..++||||++ ++
T Consensus 5 ~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~-~~ 83 (283)
T cd05118 5 GKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFMD-TD 83 (283)
T ss_pred eeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEeccC-CC
Confidence 4567899999999998 57899999987322 24678899999999999999999999865 7899999997 58
Q ss_pred HHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc----
Q 003594 540 LRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC---- 615 (808)
Q Consensus 540 L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~---- 615 (808)
|.+++... ...+++..+..++.||+.||.|||+ .+|+|+||||+||+++.++.+||+|||.+..
T Consensus 84 l~~~l~~~---------~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~ 151 (283)
T cd05118 84 LYKLIKDR---------QRGLPESLIKSYLYQLLQGLAFCHS---HGILHRDLKPENLLINTEGVLKLADFGLARSFGSP 151 (283)
T ss_pred HHHHHHhh---------cccCCHHHHHHHHHHHHHHHHHHHH---CCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCC
Confidence 98888532 3579999999999999999999999 5699999999999999999999999997632
Q ss_pred ----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhc----------HHHHHHHhc---
Q 003594 616 ----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALD----------QTTLMQVLD--- 660 (808)
Q Consensus 616 ----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~----------~~~~~~~ld--- 660 (808)
..++.++||||||+++|+|+||++||.......... ...+....+
T Consensus 152 ~~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (283)
T cd05118 152 VRPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWPKFTSLAR 231 (283)
T ss_pred cccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcccchhhhh
Confidence 145788999999999999999999985422110000 000000000
Q ss_pred ------cC-----CCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 661 ------GN-----AGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 661 ------~~-----~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
+. ........+.++.++|.+||..| |..||++.+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~--P~~Rp~~~~ll~ 279 (283)
T cd05118 232 NYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYD--PHKRITAEQALA 279 (283)
T ss_pred hhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccC--cccCcCHHHHhh
Confidence 00 00111246788999999999999 999999999875
No 359
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.96 E-value=2e-30 Score=259.49 Aligned_cols=231 Identities=18% Similarity=0.209 Sum_probs=179.0
Q ss_pred cccccCHHHHHHhhccccccccccccCCceEEEEEEE--CCeEEEEEEccCC---CCHHHHHHHHHHHhcc-CCCCccce
Q 003594 447 AFREYAAEDIRLATEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNG---LSEEDFQAKVSFLTAV-RHPHLVAV 520 (808)
Q Consensus 447 ~~~~~~~~ei~~at~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~---~~~~~~~~Ei~il~~l-~HpnIv~l 520 (808)
....|+-++|+ .+..+|.|+||+|++-.+ .|+..|||+++.. ..+.+|..|.+...+- +.||||++
T Consensus 57 ~~~~F~~~~Lq--------dlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkf 128 (361)
T KOG1006|consen 57 HLHTFTSDNLQ--------DLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKF 128 (361)
T ss_pred cccccccchHH--------HHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHH
Confidence 34556655553 234578999999999988 6899999999843 3457788898876655 78999999
Q ss_pred eecccc--ceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcc
Q 003594 521 MGCCSE--LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSIL 598 (808)
Q Consensus 521 ~g~~~~--~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NIL 598 (808)
||++.. ..||-||.|. .||..+...--. .....+++...-.|..-++.||.||-.. ..|||||+||+|||
T Consensus 129 yGa~F~EGdcWiCMELMd-~SlDklYk~vy~-----vq~~~ipE~Ilg~ItvatV~AL~yLK~~--lkiIHRDvKPSNIL 200 (361)
T KOG1006|consen 129 YGALFSEGDCWICMELMD-ISLDKLYKRVYS-----VQKSRIPENILGHITVATVDALDYLKEE--LKIIHRDVKPSNIL 200 (361)
T ss_pred hhhhhcCCceeeeHHHHh-hhHHHHHHHHHH-----HHhccCcHhhhhheeeeehhHHHHHHHH--hhhhhccCChhheE
Confidence 999743 7899999996 677665432110 3456789999999999999999999875 56999999999999
Q ss_pred cCCCccEEEEeCCCccc--------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcH
Q 003594 599 LDRNLVAKISGLGLNIC--------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQ 652 (808)
Q Consensus 599 ld~~~~~kl~DfGla~~--------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~ 652 (808)
||..|.+||||||++.. .+|+.+|||||||++|||+.||+.|+..-.. ..
T Consensus 201 ldr~G~vKLCDFGIcGqLv~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s----vf 276 (361)
T KOG1006|consen 201 LDRHGDVKLCDFGICGQLVDSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS----VF 276 (361)
T ss_pred EecCCCEeeecccchHhHHHHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH----HH
Confidence 99999999999999743 3488999999999999999999999864222 22
Q ss_pred HHHHHHhccC--CCCCCh---hhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 653 TTLMQVLDGN--AGIWPL---DLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 653 ~~~~~~ld~~--~~~~p~---~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
+.+..++.+. ....+. ..+..+..+|.-||.+| .+.||...++.+
T Consensus 277 eql~~Vv~gdpp~l~~~~~~~~~s~~~~~fintCl~Kd--~~~Rpky~~Lk~ 326 (361)
T KOG1006|consen 277 EQLCQVVIGDPPILLFDKECVHYSFSMVRFINTCLIKD--RSDRPKYDDLKK 326 (361)
T ss_pred HHHHHHHcCCCCeecCcccccccCHHHHHHHHHHhhcc--cccCcchhhhhc
Confidence 3334444432 222233 47889999999999999 899999887654
No 360
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.96 E-value=2.5e-28 Score=261.41 Aligned_cols=213 Identities=22% Similarity=0.311 Sum_probs=165.8
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCCC----CHHHHHHHHHHHhcc---CCCCccceeecccc--c-----eEEE
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNGL----SEEDFQAKVSFLTAV---RHPHLVAVMGCCSE--L-----KCIV 531 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~----~~~~~~~Ei~il~~l---~HpnIv~l~g~~~~--~-----~~lV 531 (808)
..+|.|+||.||+|.+ ++..||+|++.... ....+.+|+.++.++ +||||++++++|.+ . .+++
T Consensus 5 ~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~~l~ 84 (287)
T cd07838 5 AEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELKLTLV 84 (287)
T ss_pred EEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCceeEEE
Confidence 4568899999999998 47999999997221 124567788877666 69999999999854 3 7899
Q ss_pred EeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCC
Q 003594 532 FEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLG 611 (808)
Q Consensus 532 ~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfG 611 (808)
|||++ ++|.+++... ....+++..++.++.||+.||.|||+ .+++|+||+|+||+++.++.+||+|||
T Consensus 85 ~e~~~-~~l~~~l~~~--------~~~~l~~~~~~~~~~~i~~al~~LH~---~~i~h~~l~~~nili~~~~~~~l~dfg 152 (287)
T cd07838 85 FEHVD-QDLATYLSKC--------PKPGLPPETIKDLMRQLLRGVDFLHS---HRIVHRDLKPQNILVTSDGQVKIADFG 152 (287)
T ss_pred ehhcc-cCHHHHHHHc--------cCCCCCHHHHHHHHHHHHHHHHHHHH---CCeeeccCChhhEEEccCCCEEEeccC
Confidence 99997 5899988532 22368999999999999999999999 569999999999999999999999999
Q ss_pred Cccc------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhcc------
Q 003594 612 LNIC------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDG------ 661 (808)
Q Consensus 612 la~~------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~------ 661 (808)
++.. ..++.++|||||||++|+|++|.+||...... ..+..+.+.
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 227 (287)
T cd07838 153 LARIYSFEMALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEA-----DQLDKIFDVIGLPSE 227 (287)
T ss_pred cceeccCCcccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChH-----HHHHHHHHHcCCCCh
Confidence 8743 23467899999999999999999998643211 111111110
Q ss_pred ----------------CC----CCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 662 ----------------NA----GIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 662 ----------------~~----~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
.. .......+..+.+++.+||+.| |..||++.+++.
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d--p~~Rp~~~~il~ 283 (287)
T cd07838 228 EEWPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFN--PHKRISAFEALQ 283 (287)
T ss_pred HhcCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccC--CccCCCHHHHhc
Confidence 00 0011235678899999999999 999999998874
No 361
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.96 E-value=1.5e-28 Score=271.64 Aligned_cols=222 Identities=17% Similarity=0.230 Sum_probs=170.4
Q ss_pred hccccccccccccCCceEEEEEEE--CCeEEEEEEccCCC----CHHHHHHHHHHHhccCCCCccceeecccc-------
Q 003594 460 TEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNGL----SEEDFQAKVSFLTAVRHPHLVAVMGCCSE------- 526 (808)
Q Consensus 460 t~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~----~~~~~~~Ei~il~~l~HpnIv~l~g~~~~------- 526 (808)
.++|.. .+.+|.|+||.||++.. +|..||||++.... ....+.+|+.+|+.++||||+++++++..
T Consensus 14 ~~~y~~-~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 92 (343)
T cd07880 14 PDRYRD-LKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSLDRF 92 (343)
T ss_pred ccceEE-EEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCcccccc
Confidence 344544 45668999999999987 68999999986321 23568899999999999999999998853
Q ss_pred -ceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccE
Q 003594 527 -LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVA 605 (808)
Q Consensus 527 -~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~ 605 (808)
..++||||+ +++|.+++. ...+++..+..|+.||+.||.|||+ .+|+||||||+|||++.++.+
T Consensus 93 ~~~~lv~e~~-~~~l~~~~~-----------~~~l~~~~~~~i~~qi~~al~~LH~---~gi~H~dlkp~Nill~~~~~~ 157 (343)
T cd07880 93 HDFYLVMPFM-GTDLGKLMK-----------HEKLSEDRIQFLVYQMLKGLKYIHA---AGIIHRDLKPGNLAVNEDCEL 157 (343)
T ss_pred ceEEEEEecC-CCCHHHHHh-----------cCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCE
Confidence 348999999 789998883 2458999999999999999999999 569999999999999999999
Q ss_pred EEEeCCCccc-----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhc---------HH
Q 003594 606 KISGLGLNIC-----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALD---------QT 653 (808)
Q Consensus 606 kl~DfGla~~-----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~---------~~ 653 (808)
||+|||++.. ..++.++||||||+++|+|++|++||.......... ..
T Consensus 158 kl~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 237 (343)
T cd07880 158 KILDFGLARQTDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTPSK 237 (343)
T ss_pred EEeecccccccccCccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCH
Confidence 9999998743 125678999999999999999999986422100000 00
Q ss_pred HHH---------HHhccC-------CCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 654 TLM---------QVLDGN-------AGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 654 ~~~---------~~ld~~-------~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
.+. ...... ...+...++..+.+++.+||..| |..|||+.+++.
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~d--P~~R~t~~~~l~ 297 (343)
T cd07880 238 EFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLD--AESRITAAEALA 297 (343)
T ss_pred HHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCC--hhhCCCHHHHhc
Confidence 000 000000 00111245677999999999999 999999999884
No 362
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.96 E-value=1.2e-28 Score=272.35 Aligned_cols=220 Identities=20% Similarity=0.250 Sum_probs=166.7
Q ss_pred cccccccccccCCceEEEEEEE--CCeEEEEEEccC--CCCHHHHHHHHHHHhccCCCCccceeecccc-----------
Q 003594 462 DFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN--GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE----------- 526 (808)
Q Consensus 462 ~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~--~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~----------- 526 (808)
+|.. .+.+|.|+||.||+|.. +|..||+|.+.. ....+.+.+|+.++++++||||+++++++..
T Consensus 6 ~y~~-~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 6 RYMD-LRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred ceEE-EEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 3443 35567899999999998 578999999872 2334678899999999999999999987643
Q ss_pred -----ceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccC-
Q 003594 527 -----LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLD- 600 (808)
Q Consensus 527 -----~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld- 600 (808)
..|+||||++ ++|.+++. ...+++..+..++.||+.||.|||+ .+|+||||||+|||++
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~-----------~~~l~~~~~~~~~~qi~~aL~~LH~---~givH~dikp~Nili~~ 149 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLE-----------QGPLSEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANVFINT 149 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHH-----------cCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHEEEcC
Confidence 3689999997 68988873 2358999999999999999999999 5699999999999997
Q ss_pred CCccEEEEeCCCccc-----------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhc
Q 003594 601 RNLVAKISGLGLNIC-----------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALD 651 (808)
Q Consensus 601 ~~~~~kl~DfGla~~-----------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~ 651 (808)
.++.+||+|||++.. ..++.++|||||||++|+|++|++||..........
T Consensus 150 ~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~ 229 (342)
T cd07854 150 EDLVLKIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQ 229 (342)
T ss_pred CCceEEECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHH
Confidence 466899999998741 124568999999999999999999995322100000
Q ss_pred ----------HHHHHH--------Hh-ccCCCCC-----ChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 652 ----------QTTLMQ--------VL-DGNAGIW-----PLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 652 ----------~~~~~~--------~l-d~~~~~~-----p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
...... .. ....... ....+.++.+|+.+||..| |..||++.+++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d--P~~R~t~~ell~ 299 (342)
T cd07854 230 LILESVPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFN--PMDRLTAEEALM 299 (342)
T ss_pred HHHHhcCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCC--chhccCHHHHhC
Confidence 000000 00 0001111 1245678999999999999 999999998874
No 363
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.96 E-value=3.4e-29 Score=292.98 Aligned_cols=218 Identities=23% Similarity=0.314 Sum_probs=167.4
Q ss_pred hhccccccccccccCCceEEEEEEE--CCeEEEEEEccCCCC---HHHHHHHHHHHhccCCCCccceeecccc-------
Q 003594 459 ATEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE------- 526 (808)
Q Consensus 459 at~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~------- 526 (808)
..++|.+ +.++|+||||.||+++. +|+.||||++.-..+ -..+.+|+.+|++|+|||||+++..+.+
T Consensus 477 Y~~DFEE-L~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 477 YLNDFEE-LELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred HhhhhHH-HHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence 3455654 57889999999999997 899999999983322 2568899999999999999998754310
Q ss_pred --------------------------------------------------------------------------------
Q 003594 527 -------------------------------------------------------------------------------- 526 (808)
Q Consensus 527 -------------------------------------------------------------------------------- 526 (808)
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence
Q ss_pred ----------------------------------ceEEEEeecCCCCHHHHHhhccccccccccCCCC-CHHHHHHHHHH
Q 003594 527 ----------------------------------LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARAL-RWLDRIHIAHE 571 (808)
Q Consensus 527 ----------------------------------~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l-~~~~~~~i~~q 571 (808)
..||-||||+..+|.+++... ... .-...++++.+
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N----------~~~~~~d~~wrLFre 705 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRN----------HFNSQRDEAWRLFRE 705 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhc----------ccchhhHHHHHHHHH
Confidence 026788899887777777433 111 35667899999
Q ss_pred HHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc------------------------------------
Q 003594 572 VCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC------------------------------------ 615 (808)
Q Consensus 572 ia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~------------------------------------ 615 (808)
|+.||.|+|+ .|||||||||.||+||.++.+||+|||+|..
T Consensus 706 IlEGLaYIH~---~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYv 782 (1351)
T KOG1035|consen 706 ILEGLAYIHD---QGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYV 782 (1351)
T ss_pred HHHHHHHHHh---CceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeee
Confidence 9999999999 6699999999999999999999999999853
Q ss_pred --------C--CCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCC---CChhhHHHHHHHHHHhh
Q 003594 616 --------D--QLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGI---WPLDLAEELAGIALKCL 682 (808)
Q Consensus 616 --------~--~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~---~p~~~~~~l~~Li~~Cl 682 (808)
. .|+.|+|+|||||||+||+. ||+-.-+ ....+..+-++..+. +.....+.-..+|.+++
T Consensus 783 APEll~~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~TsME----Ra~iL~~LR~g~iP~~~~f~~~~~~~e~slI~~Ll 855 (1351)
T KOG1035|consen 783 APELLSDTSSNKYNSKIDMYSLGIVLFEMLY---PFGTSME----RASILTNLRKGSIPEPADFFDPEHPEEASLIRWLL 855 (1351)
T ss_pred cHHHhcccccccccchhhhHHHHHHHHHHhc---cCCchHH----HHHHHHhcccCCCCCCcccccccchHHHHHHHHHh
Confidence 1 48899999999999999997 4653211 112233333333222 23455667789999999
Q ss_pred ccCCCcCccccHHhhHH
Q 003594 683 SADQDANRDLRIAGVMK 699 (808)
Q Consensus 683 ~~dp~p~~Rps~~evl~ 699 (808)
+.| |.+|||+.|+|.
T Consensus 856 ~hd--P~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 856 SHD--PSKRPTATELLN 870 (1351)
T ss_pred cCC--CccCCCHHHHhh
Confidence 999 999999999884
No 364
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.96 E-value=1.4e-28 Score=290.14 Aligned_cols=228 Identities=23% Similarity=0.370 Sum_probs=191.4
Q ss_pred ccccCCceEEEEEEEC---------CeEEEEEEccCCC---CHHHHHHHHHHHhcc-CCCCccceeecccc--ceEEEEe
Q 003594 469 LKCAGDWTNVYRGRLN---------HASVAIKTLNNGL---SEEDFQAKVSFLTAV-RHPHLVAVMGCCSE--LKCIVFE 533 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~~---------~~~vAiK~l~~~~---~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~~~lV~E 533 (808)
.+|.|.||.|++|... ...||||.++... ..+.+..|+.+|..+ +|||||.++|+|.. ..++|+|
T Consensus 303 ~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~~~~~v~E 382 (609)
T KOG0200|consen 303 YLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDGPLYVIVE 382 (609)
T ss_pred eeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCCceEEEEE
Confidence 6789999999999862 3579999998433 347899999999999 69999999999976 7899999
Q ss_pred ecCCCCHHHHHhhcccccccc----ccC--CCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEE
Q 003594 534 YMPNGNLRDKLFTSQRNYKNC----SRA--RALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKI 607 (808)
Q Consensus 534 y~~~gsL~~~l~~~~~~~~~~----~~~--~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl 607 (808)
|+..|+|.++|...+...... ... ..|+..+.+.++.|||.|+.||++ +++|||||-..|||+..+..+||
T Consensus 383 y~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~---~~~vHRDLAaRNVLi~~~~~~kI 459 (609)
T KOG0200|consen 383 YAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLAS---VPCVHRDLAARNVLITKNKVIKI 459 (609)
T ss_pred eccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhh---CCccchhhhhhhEEecCCCEEEE
Confidence 999999999998764000000 011 349999999999999999999999 77999999999999999999999
Q ss_pred EeCCCccc----------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHH
Q 003594 608 SGLGLNIC----------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQV 658 (808)
Q Consensus 608 ~DfGla~~----------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ 658 (808)
+|||+|+. ..++.+||||||||+||||+| |..||..+. .....+..+
T Consensus 460 aDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~----~~~~l~~~l 535 (609)
T KOG0200|consen 460 ADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP----PTEELLEFL 535 (609)
T ss_pred ccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCC----cHHHHHHHH
Confidence 99999963 247899999999999999999 888886521 122334456
Q ss_pred hccCCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHHH
Q 003594 659 LDGNAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVR 705 (808)
Q Consensus 659 ld~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~ 705 (808)
.++.+...|..++.++.+++..||+.+ |..||++.++.+.|+.+.
T Consensus 536 ~~G~r~~~P~~c~~eiY~iM~~CW~~~--p~~RP~F~~~~~~~~~~l 580 (609)
T KOG0200|consen 536 KEGNRMEQPEHCSDEIYDLMKSCWNAD--PEDRPTFSECVEFFEKHL 580 (609)
T ss_pred hcCCCCCCCCCCCHHHHHHHHHHhCCC--cccCCCHHHHHHHHHHHH
Confidence 667888899999999999999999999 999999999999998854
No 365
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.9e-29 Score=268.39 Aligned_cols=230 Identities=20% Similarity=0.288 Sum_probs=191.9
Q ss_pred cCHHHHHHhhccccccccccccCCceEEEEEEE--CCeEEEEEEcc-----CCCCHHHHHHHHHHHhccCCCCccceeec
Q 003594 451 YAAEDIRLATEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLN-----NGLSEEDFQAKVSFLTAVRHPHLVAVMGC 523 (808)
Q Consensus 451 ~~~~ei~~at~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~-----~~~~~~~~~~Ei~il~~l~HpnIv~l~g~ 523 (808)
+.+-|+...|.|.....+++|+||||.||-+.. +|+-+|+|.+. .........+|-.||.+++.|.||.+-.+
T Consensus 174 WK~lE~qpvt~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYA 253 (591)
T KOG0986|consen 174 WKWLELQPVTKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYA 253 (591)
T ss_pred HHHHHhhhccccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeee
Confidence 344455666766666778999999999999887 78999999886 23334567889999999999999999877
Q ss_pred ccc--ceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCC
Q 003594 524 CSE--LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDR 601 (808)
Q Consensus 524 ~~~--~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~ 601 (808)
|.. .+|||+..|.||+|.-+|... ..+.+++..++.++.+|+.||.+||. .+||.|||||+|||||+
T Consensus 254 feTkd~LClVLtlMNGGDLkfHiyn~--------g~~gF~e~ra~FYAAEi~cGLehlH~---~~iVYRDLKPeNILLDd 322 (591)
T KOG0986|consen 254 FETKDALCLVLTLMNGGDLKFHIYNH--------GNPGFDEQRARFYAAEIICGLEHLHR---RRIVYRDLKPENILLDD 322 (591)
T ss_pred ecCCCceEEEEEeecCCceeEEeecc--------CCCCCchHHHHHHHHHHHhhHHHHHh---cceeeccCChhheeecc
Confidence 754 899999999999999999754 34689999999999999999999999 67999999999999999
Q ss_pred CccEEEEeCCCccc------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHH
Q 003594 602 NLVAKISGLGLNIC------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQ 657 (808)
Q Consensus 602 ~~~~kl~DfGla~~------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~ 657 (808)
.|++.|+|+|+|.. +.|+...|+|||||+||||+.|+.||...... .....+..
T Consensus 323 ~GhvRISDLGLAvei~~g~~~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeK--vk~eEvdr 400 (591)
T KOG0986|consen 323 HGHVRISDLGLAVEIPEGKPIRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEK--VKREEVDR 400 (591)
T ss_pred CCCeEeeccceEEecCCCCccccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhh--hhHHHHHH
Confidence 99999999999842 35889999999999999999999999764332 23334444
Q ss_pred HhccCCCCCChhhHHHHHHHHHHhhccCCCcCccccHH
Q 003594 658 VLDGNAGIWPLDLAEELAGIALKCLSADQDANRDLRIA 695 (808)
Q Consensus 658 ~ld~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~ 695 (808)
.+......+|...+++..+|....|..| |..|....
T Consensus 401 r~~~~~~ey~~kFS~eakslc~~LL~Kd--p~~RLGcr 436 (591)
T KOG0986|consen 401 RTLEDPEEYSDKFSEEAKSLCEGLLTKD--PEKRLGCR 436 (591)
T ss_pred HHhcchhhcccccCHHHHHHHHHHHccC--HHHhccCC
Confidence 4444556778889999999999999999 88887643
No 366
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.1e-29 Score=257.73 Aligned_cols=208 Identities=24% Similarity=0.290 Sum_probs=180.2
Q ss_pred ccccccccCCceEEEEEEE--CCeEEEEEEccCCC-----CHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeec
Q 003594 465 ERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNGL-----SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYM 535 (808)
Q Consensus 465 ~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~-----~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~ 535 (808)
+-++++|+|.||.|.+++- +|+.+|||+++... ....-..|-++|...+||.+..|-..|.. .+|+||||.
T Consensus 171 dfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFVMeya 250 (516)
T KOG0690|consen 171 DFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFVMEYA 250 (516)
T ss_pred hHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEEEEEc
Confidence 3468899999999999987 78999999998432 23456679999999999999998777754 789999999
Q ss_pred CCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc
Q 003594 536 PNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC 615 (808)
Q Consensus 536 ~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~ 615 (808)
.||.|.-+| .....+++.....+..+|+.||.|||+ ++||.||||.+|.|||.+|++||+|||+++.
T Consensus 251 nGGeLf~HL----------srer~FsE~RtRFYGaEIvsAL~YLHs---~~ivYRDlKLENLlLDkDGHIKitDFGLCKE 317 (516)
T KOG0690|consen 251 NGGELFFHL----------SRERVFSEDRTRFYGAEIVSALGYLHS---RNIVYRDLKLENLLLDKDGHIKITDFGLCKE 317 (516)
T ss_pred cCceEeeeh----------hhhhcccchhhhhhhHHHHHHhhhhhh---CCeeeeechhhhheeccCCceEeeecccchh
Confidence 999999998 456778999999999999999999999 6699999999999999999999999999864
Q ss_pred -------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhh
Q 003594 616 -------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDL 670 (808)
Q Consensus 616 -------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~ 670 (808)
..|+..+|+|.+||++|||++|+.||.. .+.+.+.+++--....+|...
T Consensus 318 ~I~~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn------~dh~kLFeLIl~ed~kFPr~l 391 (516)
T KOG0690|consen 318 EIKYGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYN------KDHEKLFELILMEDLKFPRTL 391 (516)
T ss_pred cccccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccc------cchhHHHHHHHhhhccCCccC
Confidence 3588999999999999999999999975 445556666655566788899
Q ss_pred HHHHHHHHHHhhccCCCcCcccc
Q 003594 671 AEELAGIALKCLSADQDANRDLR 693 (808)
Q Consensus 671 ~~~l~~Li~~Cl~~dp~p~~Rps 693 (808)
+++...|+...|.+| |.+|..
T Consensus 392 s~eAktLLsGLL~kd--P~kRLG 412 (516)
T KOG0690|consen 392 SPEAKTLLSGLLKKD--PKKRLG 412 (516)
T ss_pred CHHHHHHHHHHhhcC--hHhhcC
Confidence 999999999999999 788874
No 367
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=7.6e-29 Score=264.05 Aligned_cols=225 Identities=22% Similarity=0.293 Sum_probs=177.7
Q ss_pred ccccccCCceEEEEEEECCeEEEEEEccCCCCHHHHHHHHHHHhcc--CCCCccceeecccc------ceEEEEeecCCC
Q 003594 467 FRLKCAGDWTNVYRGRLNHASVAIKTLNNGLSEEDFQAKVSFLTAV--RHPHLVAVMGCCSE------LKCIVFEYMPNG 538 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~~~~~vAiK~l~~~~~~~~~~~Ei~il~~l--~HpnIv~l~g~~~~------~~~lV~Ey~~~g 538 (808)
.+.+|+|.||.||+|.|.|..||||++. ..+...+.+|.+|...+ +|+||+.+++.-.. .+|||.+|.++|
T Consensus 216 ~e~IGkGRyGEVwrG~wrGe~VAVKiF~-srdE~SWfrEtEIYqTvmLRHENILgFIaaD~~~~gs~TQLwLvTdYHe~G 294 (513)
T KOG2052|consen 216 QEIIGKGRFGEVWRGRWRGEDVAVKIFS-SRDERSWFRETEIYQTVMLRHENILGFIAADNKDNGSWTQLWLVTDYHEHG 294 (513)
T ss_pred EEEecCccccceeeccccCCceEEEEec-ccchhhhhhHHHHHHHHHhccchhhhhhhccccCCCceEEEEEeeecccCC
Confidence 4677999999999999999999999996 44567889999998864 99999999987522 789999999999
Q ss_pred CHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhc-----CCCCeEecCCCCCCcccCCCccEEEEeCCCc
Q 003594 539 NLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHST-----EPRPIVHGSLTPSSILLDRNLVAKISGLGLN 613 (808)
Q Consensus 539 sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~-----~~~~iiHrDLKp~NILld~~~~~kl~DfGla 613 (808)
||.|+|. ...++-...++++..+|+||++||.. +.+.|.|||||+.|||+..||++.|+|+|||
T Consensus 295 SL~DyL~-----------r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLA 363 (513)
T KOG2052|consen 295 SLYDYLN-----------RNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 363 (513)
T ss_pred cHHHHHh-----------hccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceee
Confidence 9999993 36799999999999999999999963 4467999999999999999999999999998
Q ss_pred ccC-----------------------------------CCCcchhhHhHHHHHHHHHcC----------CCCchhhHHHh
Q 003594 614 ICD-----------------------------------QLNVRSDIRAFGTLLLHLLTG----------RNWAGLVEKAM 648 (808)
Q Consensus 614 ~~~-----------------------------------~~t~ksDVwS~Gvil~elltG----------~~P~~~~~~~~ 648 (808)
... ..-..+||||||.|+||+... .+||...-...
T Consensus 364 v~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~D 443 (513)
T KOG2052|consen 364 VRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSD 443 (513)
T ss_pred EEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCC
Confidence 430 011458999999999998753 25665422110
Q ss_pred hhcHHHHHHHh--ccCCCCCCh-----hhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHHHH
Q 003594 649 ALDQTTLMQVL--DGNAGIWPL-----DLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVRK 706 (808)
Q Consensus 649 ~~~~~~~~~~l--d~~~~~~p~-----~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~~ 706 (808)
...+.+..++ +..++..|. .....+.+|+..||..+ |..|.|+--+-+.|.++..
T Consensus 444 -Ps~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~N--p~aRltALriKKtl~~l~~ 505 (513)
T KOG2052|consen 444 -PSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYAN--PAARLTALRIKKTLAKLSN 505 (513)
T ss_pred -CCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCC--chhhhHHHHHHHHHHHHhc
Confidence 1112222222 223343332 46678999999999999 9999999888888888764
No 368
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.96 E-value=1.6e-28 Score=271.51 Aligned_cols=223 Identities=18% Similarity=0.237 Sum_probs=170.6
Q ss_pred hhccccccccccccCCceEEEEEEE--CCeEEEEEEccCC----CCHHHHHHHHHHHhccCCCCccceeecccc------
Q 003594 459 ATEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNG----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE------ 526 (808)
Q Consensus 459 at~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~------ 526 (808)
..++|.. ...+|.|+||.||+|.+ ++..||||++... .....+.+|+.++++++||||+++++++..
T Consensus 13 ~~~~y~~-~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 13 VPDRYQN-LSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED 91 (343)
T ss_pred ccCceEE-EEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence 3456654 35668899999999998 5789999998732 123567789999999999999999987743
Q ss_pred --ceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCcc
Q 003594 527 --LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLV 604 (808)
Q Consensus 527 --~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~ 604 (808)
..++|+||+ +++|.+++. ...+++..+..++.||+.||.|||+ .+|+||||||+||+++.++.
T Consensus 92 ~~~~~lv~e~~-~~~L~~~~~-----------~~~l~~~~~~~~~~ql~~aL~~LH~---~gi~H~dlkp~Nill~~~~~ 156 (343)
T cd07851 92 FQDVYLVTHLM-GADLNNIVK-----------CQKLSDDHIQFLVYQILRGLKYIHS---AGIIHRDLKPSNIAVNEDCE 156 (343)
T ss_pred cccEEEEEecC-CCCHHHHHh-----------cCCCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCCHHHeEECCCCC
Confidence 278999999 679999883 2468999999999999999999999 56999999999999999999
Q ss_pred EEEEeCCCccc-----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhc----------
Q 003594 605 AKISGLGLNIC-----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALD---------- 651 (808)
Q Consensus 605 ~kl~DfGla~~-----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~---------- 651 (808)
+||+|||++.. ..++.++|||||||++|+|++|++||..........
T Consensus 157 ~kL~dfg~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~~~~~~i~~~~~~~~ 236 (343)
T cd07851 157 LKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPD 236 (343)
T ss_pred EEEccccccccccccccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHhcCCCC
Confidence 99999998753 135678999999999999999999985322110000
Q ss_pred --------HHHHHHHhcc----CCCC---CChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 652 --------QTTLMQVLDG----NAGI---WPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 652 --------~~~~~~~ld~----~~~~---~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
.......+.. .... .....+..+.+++.+||..+ |..|||+.+|+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~--P~~Rpt~~ell~ 297 (343)
T cd07851 237 EELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLD--PDKRITAAEALA 297 (343)
T ss_pred HHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCC--hhhCCCHHHHhc
Confidence 0000000000 0000 11134778999999999999 999999998874
No 369
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.96 E-value=2.7e-28 Score=267.65 Aligned_cols=223 Identities=20% Similarity=0.248 Sum_probs=173.4
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccCC----CCHHHHHHHHHHHhccCCCCccceeecccc-------ceEEEEe
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNNG----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE-------LKCIVFE 533 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-------~~~lV~E 533 (808)
.+.+|.|+||.||+|.. ++..||||++... ...+.+.+|+.+++.++||||+++++++.. ..|+|||
T Consensus 5 ~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~lv~e 84 (330)
T cd07834 5 LKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVYIVTE 84 (330)
T ss_pred eeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceEEEec
Confidence 35678999999999998 4789999998732 234679999999999999999999999854 4699999
Q ss_pred ecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCc
Q 003594 534 YMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 613 (808)
Q Consensus 534 y~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla 613 (808)
|++ ++|.+++. ....+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.++|+|||++
T Consensus 85 ~~~-~~l~~~l~----------~~~~l~~~~~~~i~~~l~~~l~~LH~---~gi~H~dlkp~nili~~~~~~~L~dfg~~ 150 (330)
T cd07834 85 LME-TDLHKVIK----------SPQPLTDDHIQYFLYQILRGLKYLHS---ANVIHRDLKPSNILVNSNCDLKICDFGLA 150 (330)
T ss_pred chh-hhHHHHHh----------CCCCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEcccCce
Confidence 997 58999883 34479999999999999999999999 56999999999999999999999999987
Q ss_pred cc----------------------------C-CCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhh--------------
Q 003594 614 IC----------------------------D-QLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMAL-------------- 650 (808)
Q Consensus 614 ~~----------------------------~-~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~-------------- 650 (808)
.. . .++.++||||||+++|+|++|++||.........
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~ 230 (330)
T cd07834 151 RGVDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEED 230 (330)
T ss_pred EeecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhH
Confidence 42 1 4567899999999999999999998642210000
Q ss_pred ----cHHHHHHHhcc--CC-----CCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHH--HHHHH
Q 003594 651 ----DQTTLMQVLDG--NA-----GIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKE--LDEVR 705 (808)
Q Consensus 651 ----~~~~~~~~ld~--~~-----~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~--L~~l~ 705 (808)
........+.. .. .......+..+.+++.+||+.+ |..||++.+++.. ++.++
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~--P~~Rpt~~~ll~~~~~~~~~ 296 (330)
T cd07834 231 LKFITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFD--PKKRITADEALAHPYLAQLH 296 (330)
T ss_pred hhhccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCC--hhhCCCHHHHHhCccHHhhc
Confidence 00000000000 00 0011235678999999999999 9999999999864 45444
No 370
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.96 E-value=7.3e-29 Score=287.58 Aligned_cols=227 Identities=14% Similarity=0.177 Sum_probs=157.6
Q ss_pred ccccccccccccCCceEEEEEEEC---CeEEEEE------------------Ecc-CCCCHHHHHHHHHHHhccCCCCcc
Q 003594 461 EDFSERFRLKCAGDWTNVYRGRLN---HASVAIK------------------TLN-NGLSEEDFQAKVSFLTAVRHPHLV 518 (808)
Q Consensus 461 ~~f~~~~~i~g~G~~g~Vy~~~~~---~~~vAiK------------------~l~-~~~~~~~~~~Ei~il~~l~HpnIv 518 (808)
++|.. ...+|.|+||.||+|.+. +..+++| .+. .......+.+|+.+|.+++|||||
T Consensus 148 ~~Y~i-i~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnIv 226 (501)
T PHA03210 148 AHFRV-IDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENIL 226 (501)
T ss_pred hccEE-EeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCcC
Confidence 34444 345689999999998762 2222222 111 111235688999999999999999
Q ss_pred ceeecccc--ceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCC
Q 003594 519 AVMGCCSE--LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSS 596 (808)
Q Consensus 519 ~l~g~~~~--~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~N 596 (808)
++++++.+ ..|+|++++. ++|.+++..... ..........+..|+.||+.||.|||+ .+||||||||+|
T Consensus 227 ~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~-----~~~~~~~~~~~~~i~~ql~~aL~yLH~---~gIiHrDLKP~N 297 (501)
T PHA03210 227 KIEEILRSEANTYMITQKYD-FDLYSFMYDEAF-----DWKDRPLLKQTRAIMKQLLCAVEYIHD---KKLIHRDIKLEN 297 (501)
T ss_pred cEeEEEEECCeeEEEEeccc-cCHHHHHhhccc-----cccccccHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHH
Confidence 99999855 7889999995 688888754311 112223456678899999999999999 669999999999
Q ss_pred cccCCCccEEEEeCCCccc--------------------------CCCCcchhhHhHHHHHHHHHcCCC-CchhhHH---
Q 003594 597 ILLDRNLVAKISGLGLNIC--------------------------DQLNVRSDIRAFGTLLLHLLTGRN-WAGLVEK--- 646 (808)
Q Consensus 597 ILld~~~~~kl~DfGla~~--------------------------~~~t~ksDVwS~Gvil~elltG~~-P~~~~~~--- 646 (808)
|||+.++.+||+|||+++. ..++.++|||||||+||||++|.. |++....
T Consensus 298 ILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~ 377 (501)
T PHA03210 298 IFLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPG 377 (501)
T ss_pred EEECCCCCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHH
Confidence 9999999999999999842 236788999999999999999874 4432100
Q ss_pred -H-hh-------------hcHHHHHHHhccC----C-CCCC-----hhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 647 -A-MA-------------LDQTTLMQVLDGN----A-GIWP-----LDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 647 -~-~~-------------~~~~~~~~~ld~~----~-~~~p-----~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
. .. .....+...++.. . ...+ ...+..+.+++.+||..| |..|||+.|++.
T Consensus 378 ~~~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~D--P~~Rpsa~elL~ 453 (501)
T PHA03210 378 KQLLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFD--WHLRPGAAELLA 453 (501)
T ss_pred HHHHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccC--cccCcCHHHHhh
Confidence 0 00 0000111111110 0 0000 123456788899999999 999999999985
No 371
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=99.96 E-value=3.7e-28 Score=259.48 Aligned_cols=217 Identities=22% Similarity=0.283 Sum_probs=170.2
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCC----CCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCC
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNG----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGN 539 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gs 539 (808)
..+|.|+||.||+|.. +++.||+|++... ...+.+..|+.++++++||||+++++++.+ ..++||||++ ++
T Consensus 5 ~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~~-~~ 83 (282)
T cd07829 5 EKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYCD-MD 83 (282)
T ss_pred hcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCcC-cC
Confidence 4568899999999998 4799999999832 224678899999999999999999999865 7899999997 69
Q ss_pred HHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc----
Q 003594 540 LRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC---- 615 (808)
Q Consensus 540 L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~---- 615 (808)
|.+++... ...+++..+..++.+++.||.|||+ .+|+||||+|+||+++.++.+||+|||++..
T Consensus 84 l~~~i~~~---------~~~~~~~~~~~~~~~i~~~l~~LH~---~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~ 151 (282)
T cd07829 84 LKKYLDKR---------PGPLSPNLIKSIMYQLLRGLAYCHS---HRILHRDLKPQNILINRDGVLKLADFGLARAFGIP 151 (282)
T ss_pred HHHHHHhh---------ccCCCHHHHHHHHHHHHHHHHHHHH---CCcccCCCChheEEEcCCCCEEEecCCcccccCCC
Confidence 99999532 2569999999999999999999999 5699999999999999999999999998742
Q ss_pred ----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhh----------cHHHHHHHh----
Q 003594 616 ----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMAL----------DQTTLMQVL---- 659 (808)
Q Consensus 616 ----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~----------~~~~~~~~l---- 659 (808)
..++.++|||||||++|+|++|++||......... ....+..+.
T Consensus 152 ~~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (282)
T cd07829 152 LRTYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPD 231 (282)
T ss_pred ccccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccccc
Confidence 14567899999999999999999998643211000 000000000
Q ss_pred -ccCCCCC--------ChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 660 -DGNAGIW--------PLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 660 -d~~~~~~--------p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
+.....+ .+..+..+.+++.+||..+ |..||++.+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~--P~~Rp~~~~~l~ 278 (282)
T cd07829 232 YKPTFPKFPPKDLEKVLPRLDPEGIDLLSKMLQYN--PAKRISAKEALK 278 (282)
T ss_pred ccccccccCccchHHhcccccHHHHHHHHHhhccC--cccCCCHHHHhh
Confidence 0000001 1123678999999999999 999999998875
No 372
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.96 E-value=1.6e-28 Score=256.79 Aligned_cols=196 Identities=17% Similarity=0.157 Sum_probs=159.6
Q ss_pred CCceEEEEEEE--CCeEEEEEEccCCCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCHHHHHhhcc
Q 003594 473 GDWTNVYRGRL--NHASVAIKTLNNGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNLRDKLFTSQ 548 (808)
Q Consensus 473 G~~g~Vy~~~~--~~~~vAiK~l~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL~~~l~~~~ 548 (808)
|.||.||++.+ +++.||+|.+.... .+.+|...+....||||+++++++.+ ..++||||++||+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~---~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~-- 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS---EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK-- 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh---hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH--
Confidence 78999999998 68899999997432 34455666666789999999999865 78999999999999999943
Q ss_pred ccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-------------
Q 003594 549 RNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC------------- 615 (808)
Q Consensus 549 ~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~------------- 615 (808)
...+++..+..++.|++.||.|||+ ++|+||||||+||+++.++.++++|||.+..
T Consensus 79 --------~~~l~~~~~~~~~~ql~~~l~~lH~---~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~ 147 (237)
T cd05576 79 --------FLNIPEECVKRWAAEMVVALDALHR---EGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENM 147 (237)
T ss_pred --------hcCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCcc
Confidence 3458999999999999999999999 6699999999999999999999999997531
Q ss_pred ---------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHHHHHHHHHhhccCC
Q 003594 616 ---------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAGIALKCLSADQ 686 (808)
Q Consensus 616 ---------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dp 686 (808)
..++.++||||||+++|+|++|++|+...... +........|..++..+.+++.+||+.|
T Consensus 148 y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~li~~~l~~d- 216 (237)
T cd05576 148 YCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG----------INTHTTLNIPEWVSEEARSLLQQLLQFN- 216 (237)
T ss_pred ccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh----------cccccccCCcccCCHHHHHHHHHHccCC-
Confidence 23577899999999999999999887532110 0111122345567889999999999999
Q ss_pred CcCccccHHh
Q 003594 687 DANRDLRIAG 696 (808)
Q Consensus 687 ~p~~Rps~~e 696 (808)
|..||++.+
T Consensus 217 -p~~R~~~~~ 225 (237)
T cd05576 217 -PTERLGAGV 225 (237)
T ss_pred -HHHhcCCCc
Confidence 899998643
No 373
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=99.96 E-value=4e-28 Score=263.21 Aligned_cols=222 Identities=20% Similarity=0.251 Sum_probs=167.9
Q ss_pred hccccccccccccCCceEEEEEEE--CCeEEEEEEccCC----CCHHHHHHHHHHHhccCCCCccceeecccc-------
Q 003594 460 TEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNG----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE------- 526 (808)
Q Consensus 460 t~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~------- 526 (808)
+++|... +.+|.|+||.||+|.+ ++..||||++... .....+.+|+.+++.++||||+++++++.+
T Consensus 7 ~~~y~~~-~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 85 (311)
T cd07866 7 LRDYEIL-GKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKR 85 (311)
T ss_pred cccEEEE-EEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheecccccccc
Confidence 3556544 4457899999999998 5789999998621 223467899999999999999999988743
Q ss_pred ---ceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCc
Q 003594 527 ---LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNL 603 (808)
Q Consensus 527 ---~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~ 603 (808)
..++||||+. ++|...+.. ....+++..+..++.||+.||.|||+ .+|+||||||+|||++.++
T Consensus 86 ~~~~~~lv~~~~~-~~l~~~~~~---------~~~~~~~~~~~~i~~~l~~al~~lH~---~~i~H~dl~p~nil~~~~~ 152 (311)
T cd07866 86 KRGSVYMVTPYMD-HDLSGLLEN---------PSVKLTESQIKCYMLQLLEGINYLHE---NHILHRDIKAANILIDNQG 152 (311)
T ss_pred cCceEEEEEecCC-cCHHHHHhc---------cccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEECCCC
Confidence 3689999996 577777742 34569999999999999999999999 6699999999999999999
Q ss_pred cEEEEeCCCccc-------------------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHH
Q 003594 604 VAKISGLGLNIC-------------------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEK 646 (808)
Q Consensus 604 ~~kl~DfGla~~-------------------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~ 646 (808)
.+||+|||++.. ..++.++|||||||++|+|++|++||.....
T Consensus 153 ~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~ 232 (311)
T cd07866 153 ILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSD 232 (311)
T ss_pred CEEECcCccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCH
Confidence 999999998742 1246789999999999999999999864221
Q ss_pred HhhhcHHHHHHHhc-------------------cCCCCCC-------hhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 647 AMALDQTTLMQVLD-------------------GNAGIWP-------LDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 647 ~~~~~~~~~~~~ld-------------------~~~~~~p-------~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
.. . ......... ......+ ......+.+++.+||+.| |..|||+.+++.
T Consensus 233 ~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~--p~~R~t~~ell~ 307 (311)
T cd07866 233 ID-Q-LHLIFKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLD--PYKRLTASDALE 307 (311)
T ss_pred HH-H-HHHHHHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccC--cccCcCHHHHhc
Confidence 10 0 000000000 0000011 123367889999999999 999999988864
No 374
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.95 E-value=4.7e-28 Score=266.36 Aligned_cols=216 Identities=17% Similarity=0.205 Sum_probs=165.2
Q ss_pred cccccCCceEEEEEEEC----CeEEEEEEccCC----CCHHHHHHHHHHHhcc-CCCCccceeeccc------cceEEEE
Q 003594 468 RLKCAGDWTNVYRGRLN----HASVAIKTLNNG----LSEEDFQAKVSFLTAV-RHPHLVAVMGCCS------ELKCIVF 532 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~~----~~~vAiK~l~~~----~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~------~~~~lV~ 532 (808)
+.+|.|+||.||++... +..||||.+... .....+.+|+.++.++ .||||+++++++. ...++++
T Consensus 6 ~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~ 85 (332)
T cd07857 6 KELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNELYLYE 85 (332)
T ss_pred EEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCcEEEEE
Confidence 55788999999999983 668999998732 1245688899999999 5999999998742 2468899
Q ss_pred eecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCC
Q 003594 533 EYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 612 (808)
Q Consensus 533 Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGl 612 (808)
+|+. ++|.+++. ....+++..+..++.||+.||.|||+ .+|+||||||+|||++.++.+||+|||+
T Consensus 86 e~~~-~~L~~~l~----------~~~~~~~~~~~~~~~qi~~aL~~LH~---~givH~dlkp~Nili~~~~~~kl~Dfg~ 151 (332)
T cd07857 86 ELME-ADLHQIIR----------SGQPLTDAHFQSFIYQILCGLKYIHS---ANVLHRDLKPGNLLVNADCELKICDFGL 151 (332)
T ss_pred eccc-CCHHHHHh----------cCCCCCHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHeEEcCCCCEEeCcCCC
Confidence 9986 79999983 44578999999999999999999999 5699999999999999999999999998
Q ss_pred ccc------------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHh----------hhcH
Q 003594 613 NIC------------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAM----------ALDQ 652 (808)
Q Consensus 613 a~~------------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~----------~~~~ 652 (808)
+.. ..++.++|||||||++|+|++|.+||....... ....
T Consensus 152 a~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~ 231 (332)
T cd07857 152 ARGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDE 231 (332)
T ss_pred ceecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCH
Confidence 741 125678999999999999999999986421100 0000
Q ss_pred HHHHHHhc-----------c-CCCC---CChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 653 TTLMQVLD-----------G-NAGI---WPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 653 ~~~~~~ld-----------~-~~~~---~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
..+..+.. . .... .....+..+.+++.+||+.| |..||++.+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~--P~~R~t~~~ll~ 291 (332)
T cd07857 232 ETLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFD--PTKRISVEEALE 291 (332)
T ss_pred HHHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCC--cccCCCHHHHhc
Confidence 11111000 0 0000 11234678999999999999 999999998864
No 375
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=4e-28 Score=265.88 Aligned_cols=210 Identities=19% Similarity=0.216 Sum_probs=165.4
Q ss_pred ccccccccCCceEEEEEEE--CCeEEEEEEccC-----CCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeec
Q 003594 465 ERFRLKCAGDWTNVYRGRL--NHASVAIKTLNN-----GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYM 535 (808)
Q Consensus 465 ~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~-----~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~ 535 (808)
..++-+|-|+||.|.++.- +...+|+|.|+. .........|-.||...+++.||+||..|.+ .+|+||+|+
T Consensus 632 vkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMdYI 711 (1034)
T KOG0608|consen 632 VKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMDYI 711 (1034)
T ss_pred EEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEecc
Confidence 3456778999999999876 567899999982 2234567889999999999999999999977 899999999
Q ss_pred CCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc
Q 003594 536 PNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC 615 (808)
Q Consensus 536 ~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~ 615 (808)
+||++..+| ..-+.+.+..+..++.++.+|+.+.|. .|+|||||||+|||||.+|++||.||||+..
T Consensus 712 PGGDmMSLL----------IrmgIFeE~LARFYIAEltcAiesVHk---mGFIHRDiKPDNILIDrdGHIKLTDFGLCTG 778 (1034)
T KOG0608|consen 712 PGGDMMSLL----------IRMGIFEEDLARFYIAELTCAIESVHK---MGFIHRDIKPDNILIDRDGHIKLTDFGLCTG 778 (1034)
T ss_pred CCccHHHHH----------HHhccCHHHHHHHHHHHHHHHHHHHHh---ccceecccCccceEEccCCceeeeecccccc
Confidence 999999999 456789999999999999999999999 6699999999999999999999999999842
Q ss_pred -------------------------------------------------------------------CCCCcchhhHhHH
Q 003594 616 -------------------------------------------------------------------DQLNVRSDIRAFG 628 (808)
Q Consensus 616 -------------------------------------------------------------------~~~t~ksDVwS~G 628 (808)
.+|+..+|+||.|
T Consensus 779 fRWTHdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~g 858 (1034)
T KOG0608|consen 779 FRWTHDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVG 858 (1034)
T ss_pred ceeccccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhh
Confidence 2467889999999
Q ss_pred HHHHHHHcCCCCchhhHHH-hhhcHHHHHHHhccCCCCCChhhHHHHHHHHHHhhccCCCcCcccc
Q 003594 629 TLLLHLLTGRNWAGLVEKA-MALDQTTLMQVLDGNAGIWPLDLAEELAGIALKCLSADQDANRDLR 693 (808)
Q Consensus 629 vil~elltG~~P~~~~~~~-~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps 693 (808)
||||||+.|++||-..... ....-..+...++- .+..+++.+..+||.++|.- +..|..
T Consensus 859 vil~em~~g~~pf~~~tp~~tq~kv~nw~~~l~~---~~~~~ls~e~~~li~kLc~s---ad~RLG 918 (1034)
T KOG0608|consen 859 VILYEMLVGQPPFLADTPGETQYKVINWRNFLHI---PYQGNLSKEALDLIQKLCCS---ADSRLG 918 (1034)
T ss_pred HHHHHHhhCCCCccCCCCCcceeeeeehhhcccc---ccccccCHHHHHHHHHHhcC---hhhhhc
Confidence 9999999999999643211 00111223333331 22235667777777664432 345664
No 376
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.95 E-value=1.6e-28 Score=250.51 Aligned_cols=223 Identities=20% Similarity=0.277 Sum_probs=172.2
Q ss_pred ccccccCCceEEEEEEEC------CeEEEEEEccCC----CCHHHHHHHHHHHhccCCCCccceeecccc---ceEEEEe
Q 003594 467 FRLKCAGDWTNVYRGRLN------HASVAIKTLNNG----LSEEDFQAKVSFLTAVRHPHLVAVMGCCSE---LKCIVFE 533 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~~------~~~vAiK~l~~~----~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~---~~~lV~E 533 (808)
...+|+|+||.||++.-. ...+|||.++.. .-.....+|+.+++.|+||||+.|..+|.+ ..+|++|
T Consensus 29 ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v~l~fd 108 (438)
T KOG0666|consen 29 IGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKVWLLFD 108 (438)
T ss_pred cceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceEEEEeh
Confidence 355689999999999751 237999999833 223567899999999999999999998855 7899999
Q ss_pred ecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCC----ccEEEEe
Q 003594 534 YMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRN----LVAKISG 609 (808)
Q Consensus 534 y~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~----~~~kl~D 609 (808)
|.+ -+|...|+-++. .....++......|+.||+.|+.|||++- |+||||||+|||+..+ |.+||+|
T Consensus 109 YAE-hDL~~II~fHr~-----~~~~~lp~~mvKsilwQil~Gv~YLH~NW---vlHRDLKPaNIlvmgdgperG~VKIaD 179 (438)
T KOG0666|consen 109 YAE-HDLWHIIKFHRA-----SKAKQLPRSMVKSILWQILDGVHYLHSNW---VLHRDLKPANILVMGDGPERGRVKIAD 179 (438)
T ss_pred hhh-hhHHHHHHHhcc-----chhccCCHHHHHHHHHHHHhhhHHHhhhh---eeeccCCcceEEEeccCCccCeeEeec
Confidence 998 589999987643 34468999999999999999999999954 9999999999999877 9999999
Q ss_pred CCCccc-----------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhh----hcHHHHH
Q 003594 610 LGLNIC-----------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMA----LDQTTLM 656 (808)
Q Consensus 610 fGla~~-----------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~----~~~~~~~ 656 (808)
||+++. ..||++.||||.|||+.||+|-.|-|...+.... .....+.
T Consensus 180 lGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~ 259 (438)
T KOG0666|consen 180 LGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLD 259 (438)
T ss_pred ccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHH
Confidence 999864 3589999999999999999999987754332111 1111222
Q ss_pred HH---hc-cCCCCCCh--------------------------------hhHHHHHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 657 QV---LD-GNAGIWPL--------------------------------DLAEELAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 657 ~~---ld-~~~~~~p~--------------------------------~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
.+ +- +....||. .-++...+|+.++|.+| |-.|.|+.+.++.
T Consensus 260 rIf~vLG~Pt~~~Wp~lkk~Pe~q~~ls~f~~~~~~n~sL~~~~~~~k~k~~~a~~LL~klL~yD--P~kRIta~qAleh 337 (438)
T KOG0666|consen 260 RIFEVLGTPTDKDWPDLKKMPEYQTLLSDFRRHYYDNVSLHKYYHKHKVKDPSALDLLQKLLTYD--PIKRITAEQALEH 337 (438)
T ss_pred HHHHHcCCCccccchhhhhCcchHHHHHHhHHhhcCcchHHHHHHHhcCCCchHHHHHHHHhccC--chhhccHHHHhcc
Confidence 22 11 12223331 01223778999999999 8999998887654
No 377
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.95 E-value=5e-27 Score=243.13 Aligned_cols=206 Identities=25% Similarity=0.357 Sum_probs=169.5
Q ss_pred CceEEEEEEE--CCeEEEEEEccCCCC---HHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCHHHHHhh
Q 003594 474 DWTNVYRGRL--NHASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNLRDKLFT 546 (808)
Q Consensus 474 ~~g~Vy~~~~--~~~~vAiK~l~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL~~~l~~ 546 (808)
+||.||+|.. +|..||+|++..... .+.+.+|+..+++++|+||+++++++.. ..+++|||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 4899999999 469999999984332 5789999999999999999999999864 78999999999999999943
Q ss_pred ccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-----------
Q 003594 547 SQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC----------- 615 (808)
Q Consensus 547 ~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~----------- 615 (808)
...+++..++.++.+++.+|.|||+ .+|+|+||+|+||+++.++.++|+|||.+..
T Consensus 81 ----------~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~ 147 (244)
T smart00220 81 ----------RGRLSEDEARFYARQILSALEYLHS---NGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFV 147 (244)
T ss_pred ----------ccCCCHHHHHHHHHHHHHHHHHHHH---cCeecCCcCHHHeEECCCCcEEEccccceeeecccccccccc
Confidence 2338999999999999999999999 5699999999999999999999999998743
Q ss_pred -------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChh---hHHHHHHHHH
Q 003594 616 -------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLD---LAEELAGIAL 679 (808)
Q Consensus 616 -------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~---~~~~l~~Li~ 679 (808)
..++.++||||||+++|+|++|.+||.... ........+.......... ++..+.+++.
T Consensus 148 ~~~~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 222 (244)
T smart00220 148 GTPEYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDD-----QLLELFKKIGKPKPPFPPPEWKISPEAKDLIR 222 (244)
T ss_pred CCcCCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC-----cHHHHHHHHhccCCCCccccccCCHHHHHHHH
Confidence 235678999999999999999999986521 1122222222222222211 7789999999
Q ss_pred HhhccCCCcCccccHHhhHH
Q 003594 680 KCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 680 ~Cl~~dp~p~~Rps~~evl~ 699 (808)
+||..+ |..||++.++++
T Consensus 223 ~~l~~~--p~~Rp~~~~~~~ 240 (244)
T smart00220 223 KLLVKD--PEKRLTAEEALQ 240 (244)
T ss_pred HHccCC--chhccCHHHHhh
Confidence 999999 999999999885
No 378
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.95 E-value=7.7e-28 Score=267.81 Aligned_cols=213 Identities=19% Similarity=0.287 Sum_probs=170.9
Q ss_pred cccccccc---cccCCceEEEEEEE--CCeEEEEEEccCCCCHHHHHHHHHHHhcc-CCCCccceeecccc--ceEEEEe
Q 003594 462 DFSERFRL---KCAGDWTNVYRGRL--NHASVAIKTLNNGLSEEDFQAKVSFLTAV-RHPHLVAVMGCCSE--LKCIVFE 533 (808)
Q Consensus 462 ~f~~~~~i---~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~~~lV~E 533 (808)
.|.+.+.+ +|.|+|+.|-.+.. +++..++|++... ..+-.+|+.++... .||||+++.+.|.+ +.|+|||
T Consensus 319 ~~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~--~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e 396 (612)
T KOG0603|consen 319 PFTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR--ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME 396 (612)
T ss_pred CcchhhccccccCCCCccceeeeeccccccchhheecccc--ccccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence 45444433 46899999999998 6789999999744 23445677776666 79999999999987 7899999
Q ss_pred ecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCccc-CCCccEEEEeCCC
Q 003594 534 YMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILL-DRNLVAKISGLGL 612 (808)
Q Consensus 534 y~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILl-d~~~~~kl~DfGl 612 (808)
++.||-|.+.+... .... ..+..|+.+|+.|+.|||+ +++|||||||+|||+ +..++++|+|||.
T Consensus 397 ~l~g~ell~ri~~~----------~~~~-~e~~~w~~~lv~Av~~LH~---~gvvhRDLkp~NIL~~~~~g~lrltyFG~ 462 (612)
T KOG0603|consen 397 LLDGGELLRRIRSK----------PEFC-SEASQWAAELVSAVDYLHE---QGVVHRDLKPGNILLDGSAGHLRLTYFGF 462 (612)
T ss_pred hccccHHHHHHHhc----------chhH-HHHHHHHHHHHHHHHHHHh---cCeeecCCChhheeecCCCCcEEEEEech
Confidence 99999988888422 2223 6777899999999999999 679999999999999 5889999999999
Q ss_pred ccc----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhh
Q 003594 613 NIC----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDL 670 (808)
Q Consensus 613 a~~----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~ 670 (808)
++. ..|++.+||||||++||+|++|+.||..... +......+ ..+.+...+
T Consensus 463 a~~~~~~~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~----~~ei~~~i---~~~~~s~~v 535 (612)
T KOG0603|consen 463 WSELERSCDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPA----GIEIHTRI---QMPKFSECV 535 (612)
T ss_pred hhhCchhhcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCc----hHHHHHhh---cCCcccccc
Confidence 753 4689999999999999999999999975322 11222222 233344678
Q ss_pred HHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 671 AEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 671 ~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
+...++|+.+||+.| |..||++.++..
T Consensus 536 S~~AKdLl~~LL~~d--P~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 536 SDEAKDLLQQLLQVD--PALRLGADEIGA 562 (612)
T ss_pred CHHHHHHHHHhccCC--hhhCcChhhhcc
Confidence 999999999999999 999999888764
No 379
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=7.1e-28 Score=252.93 Aligned_cols=206 Identities=22% Similarity=0.309 Sum_probs=172.9
Q ss_pred ccccccCCceEEEEEEECC--eEEEEEEccCC-----CCHHHHHHHHHHHhcc-CCCCccceeecccc--ceEEEEeecC
Q 003594 467 FRLKCAGDWTNVYRGRLNH--ASVAIKTLNNG-----LSEEDFQAKVSFLTAV-RHPHLVAVMGCCSE--LKCIVFEYMP 536 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~~~--~~vAiK~l~~~-----~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~~~lV~Ey~~ 536 (808)
+.++|.|+||.|.++...| ..+|||+++.+ .+.+--..|-++|... +-|.+++++.+|.. .+|.||||+.
T Consensus 354 l~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFVMEyvn 433 (683)
T KOG0696|consen 354 LMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFVMEYVN 433 (683)
T ss_pred EEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeEEEEec
Confidence 3678999999999999855 67999999833 2233445677788776 57889999988865 8999999999
Q ss_pred CCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-
Q 003594 537 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC- 615 (808)
Q Consensus 537 ~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~- 615 (808)
||+|.-.+ .+-+.+.+..+..++.+|+-||-|||+ ++||.||||.+||+||.+|++||+|||+++.
T Consensus 434 GGDLMyhi----------QQ~GkFKEp~AvFYAaEiaigLFFLh~---kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEn 500 (683)
T KOG0696|consen 434 GGDLMYHI----------QQVGKFKEPVAVFYAAEIAIGLFFLHS---KGIIYRDLKLDNVMLDSEGHIKIADFGMCKEN 500 (683)
T ss_pred CchhhhHH----------HHhcccCCchhhhhhHHHHHHhhhhhc---CCeeeeeccccceEeccCCceEeeeccccccc
Confidence 99999999 455678888899999999999999999 7799999999999999999999999999864
Q ss_pred ------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhH
Q 003594 616 ------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLA 671 (808)
Q Consensus 616 ------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~ 671 (808)
..|+..+|+|||||+||||+.|.+||+.. .+...+..+.+ ....+|...+
T Consensus 501 i~~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGe-----DE~elF~aI~e-hnvsyPKslS 574 (683)
T KOG0696|consen 501 IFDGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGE-----DEDELFQAIME-HNVSYPKSLS 574 (683)
T ss_pred ccCCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCC-----CHHHHHHHHHH-ccCcCccccc
Confidence 35889999999999999999999999873 22333444444 4557888999
Q ss_pred HHHHHHHHHhhccCCCcCcccc
Q 003594 672 EELAGIALKCLSADQDANRDLR 693 (808)
Q Consensus 672 ~~l~~Li~~Cl~~dp~p~~Rps 693 (808)
.+...++...|.+. |..|..
T Consensus 575 kEAv~ickg~ltK~--P~kRLG 594 (683)
T KOG0696|consen 575 KEAVAICKGLLTKH--PGKRLG 594 (683)
T ss_pred HHHHHHHHHHhhcC--CccccC
Confidence 99999999999999 778764
No 380
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.94 E-value=1.4e-26 Score=276.80 Aligned_cols=138 Identities=23% Similarity=0.360 Sum_probs=119.7
Q ss_pred cccccccccccCCceEEEEEEEC--CeEEEEEEccCCC-----CHHHHHHHHHHHhccCCCCccceeecccc--ceEEEE
Q 003594 462 DFSERFRLKCAGDWTNVYRGRLN--HASVAIKTLNNGL-----SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVF 532 (808)
Q Consensus 462 ~f~~~~~i~g~G~~g~Vy~~~~~--~~~vAiK~l~~~~-----~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~ 532 (808)
+|.. .+.+|.|+||.||+|.+. ++.||||++.... ....+..|+.++..++||||+++++++.. ..||||
T Consensus 5 ~y~i-~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lVm 83 (669)
T cd05610 5 EFVI-VKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLVM 83 (669)
T ss_pred CEEE-EEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEEE
Confidence 4443 356689999999999994 8999999997321 13578899999999999999999988854 789999
Q ss_pred eecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCC
Q 003594 533 EYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 612 (808)
Q Consensus 533 Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGl 612 (808)
||++|++|.+++. ....+++..++.|+.||+.||.|||. .+||||||||+||||+.++.+||+|||+
T Consensus 84 Ey~~g~~L~~li~----------~~~~l~~~~~~~i~~qil~aL~yLH~---~gIiHrDLKP~NILl~~~g~vkL~DFGl 150 (669)
T cd05610 84 EYLIGGDVKSLLH----------IYGYFDEEMAVKYISEVALALDYLHR---HGIIHRDLKPDNMLISNEGHIKLTDFGL 150 (669)
T ss_pred eCCCCCCHHHHHH----------hcCCCCHHHHHHHHHHHHHHHHHHHh---CCEEeCCccHHHEEEcCCCCEEEEeCCC
Confidence 9999999999994 33468899999999999999999999 5699999999999999999999999997
Q ss_pred c
Q 003594 613 N 613 (808)
Q Consensus 613 a 613 (808)
+
T Consensus 151 s 151 (669)
T cd05610 151 S 151 (669)
T ss_pred C
Confidence 6
No 381
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.94 E-value=6.4e-28 Score=239.61 Aligned_cols=219 Identities=16% Similarity=0.271 Sum_probs=169.3
Q ss_pred cccccccCCceEEEEEEE--CCeEEEEEEcc----CCCCHHHHHHHHHHHhccCCCCccceeecccc----------ceE
Q 003594 466 RFRLKCAGDWTNVYRGRL--NHASVAIKTLN----NGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE----------LKC 529 (808)
Q Consensus 466 ~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~----~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~----------~~~ 529 (808)
....+|+|.||.||+++. .|+.||+|++- ...-...-.+|+.+|..+.|+|++.++..|.. .+|
T Consensus 21 k~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~y 100 (376)
T KOG0669|consen 21 KLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFY 100 (376)
T ss_pred HHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceee
Confidence 345678999999999998 57889998765 22234567899999999999999999999943 479
Q ss_pred EEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEe
Q 003594 530 IVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISG 609 (808)
Q Consensus 530 lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~D 609 (808)
|||.+|+ -+|..+|. .....++...+.+++.++..||.|+|.+. |+|||+||+|+||+.+|.+||+|
T Consensus 101 lVf~~ce-hDLaGlLs---------n~~vr~sls~Ikk~Mk~Lm~GL~~iHr~k---ilHRDmKaaNvLIt~dgilklAD 167 (376)
T KOG0669|consen 101 LVFDFCE-HDLAGLLS---------NRKVRFSLSEIKKVMKGLMNGLYYIHRNK---ILHRDMKAANVLITKDGILKLAD 167 (376)
T ss_pred eeHHHhh-hhHHHHhc---------CccccccHHHHHHHHHHHHHHHHHHHHhh---HHhhcccHhhEEEcCCceEEeec
Confidence 9999997 58999884 23467899999999999999999999965 99999999999999999999999
Q ss_pred CCCccc------------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhh----------
Q 003594 610 LGLNIC------------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMA---------- 649 (808)
Q Consensus 610 fGla~~------------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~---------- 649 (808)
||+++. ..|+++.|||.-|||+.||+||.|-|....+...
T Consensus 168 FGlar~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs 247 (376)
T KOG0669|consen 168 FGLARAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGS 247 (376)
T ss_pred cccccceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhcc
Confidence 999853 3588999999999999999999987754222100
Q ss_pred --------hcHHHHHHHhccCCCCCCh-------------hhHHHHHHHHHHhhccCCCcCccccHHhhHHHH
Q 003594 650 --------LDQTTLMQVLDGNAGIWPL-------------DLAEELAGIALKCLSADQDANRDLRIAGVMKEL 701 (808)
Q Consensus 650 --------~~~~~~~~~ld~~~~~~p~-------------~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L 701 (808)
.+.-.+.+.+. ..+.|. .-.++..+|+.++|.+| |..|+.+.+++..-
T Consensus 248 ~tkevWP~~d~lpL~~sie--~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~D--P~kR~~ad~alnh~ 316 (376)
T KOG0669|consen 248 ITKEVWPNVDNLPLYQSIE--LEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLD--PTKRIDADQALNHD 316 (376)
T ss_pred CCcccCCCcccchHHHhcc--CCCCCcchhhhhhhhcccccCChhHHHHHHHHhccC--cccCcchHhhhchh
Confidence 00011111110 000111 11236789999999999 99999999887643
No 382
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.94 E-value=1.5e-26 Score=263.56 Aligned_cols=215 Identities=20% Similarity=0.329 Sum_probs=178.7
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccCC-CCHHHHHHHHHHHhcc-CCCCccceeecc-------ccceEEEEeec
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNNG-LSEEDFQAKVSFLTAV-RHPHLVAVMGCC-------SELKCIVFEYM 535 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-~~~~~~~~Ei~il~~l-~HpnIv~l~g~~-------~~~~~lV~Ey~ 535 (808)
...+|.|.||.||++.. +++.+|+|++... ...+++..|.++|... +|||++.+||+| .+.+|||||||
T Consensus 24 ~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~DqLWLVMEfC 103 (953)
T KOG0587|consen 24 IEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQLWLVMEFC 103 (953)
T ss_pred EEEEeeccceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCeEEEEeecc
Confidence 34567899999998886 7899999999844 4457888999999988 799999999998 24899999999
Q ss_pred CCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc
Q 003594 536 PNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC 615 (808)
Q Consensus 536 ~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~ 615 (808)
.|||.-|+++.. ....+.|..+..|+.+++.||.+||.+. +||||||-.||||+.++.+||+|||.+..
T Consensus 104 ~gGSVTDLVKn~--------~g~rl~E~~IaYI~re~lrgl~HLH~nk---viHRDikG~NiLLT~e~~VKLvDFGvSaQ 172 (953)
T KOG0587|consen 104 GGGSVTDLVKNT--------KGNRLKEEWIAYILREILRGLAHLHNNK---VIHRDIKGQNVLLTENAEVKLVDFGVSAQ 172 (953)
T ss_pred CCccHHHHHhhh--------cccchhhHHHHHHHHHHHHHHHHHhhcc---eeeecccCceEEEeccCcEEEeeeeeeee
Confidence 999999999765 3678999999999999999999999965 99999999999999999999999999743
Q ss_pred ------------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhcc--CC
Q 003594 616 ------------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDG--NA 663 (808)
Q Consensus 616 ------------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~--~~ 663 (808)
..|+..+|+||||++..||.-|.||+...... ..+..+... ..
T Consensus 173 ldsT~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPm-----raLF~IpRNPPPk 247 (953)
T KOG0587|consen 173 LDSTVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPM-----RALFLIPRNPPPK 247 (953)
T ss_pred eecccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchh-----hhhccCCCCCCcc
Confidence 34788999999999999999999998654321 112222111 11
Q ss_pred CCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 664 GIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 664 ~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
...|...+.++.++|..||.+| -..||++.++++
T Consensus 248 Lkrp~kWs~~FndFIs~cL~Kd--~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 248 LKRPKKWSKKFNDFISTCLVKD--YEQRPSTEELLK 281 (953)
T ss_pred ccchhhHHHHHHHHHHHHHhhc--cccCcchhhhcc
Confidence 2235678899999999999999 889999888774
No 383
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.94 E-value=6.4e-27 Score=226.78 Aligned_cols=186 Identities=20% Similarity=0.224 Sum_probs=151.1
Q ss_pred ccccCCceEEEEEEE--CCeEEEEEEcc---CCCCHHHHHHHHHHHhcc-CCCCccceeecccc--ceEEEEeecCCCCH
Q 003594 469 LKCAGDWTNVYRGRL--NHASVAIKTLN---NGLSEEDFQAKVSFLTAV-RHPHLVAVMGCCSE--LKCIVFEYMPNGNL 540 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~--~~~~vAiK~l~---~~~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL 540 (808)
-+|+|+||.|-+-++ +|+..|+|.+. +...+++..+|+.+..+. ..|.+|.+||.... ..+|.||.|. .||
T Consensus 53 elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~M~-tSl 131 (282)
T KOG0984|consen 53 ELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMELMD-TSL 131 (282)
T ss_pred hhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHHhh-hhH
Confidence 357899998866665 89999999998 334457788899886665 79999999998754 7899999996 788
Q ss_pred HHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-----
Q 003594 541 RDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC----- 615 (808)
Q Consensus 541 ~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~----- 615 (808)
..+...-- .....+++...-+|+..|..||.|||+. ..+||||+||+||||+.+|.+||||||++..
T Consensus 132 dkfy~~v~------~~g~~ipE~vlGkIa~Svv~al~~L~~k--L~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSi 203 (282)
T KOG0984|consen 132 DKFYRKVL------KKGGTIPEDVLGKIAVSVVHALEFLHSK--LSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSI 203 (282)
T ss_pred HHHHHHHH------hcCCcCchHHhhHhHHHHHHHHHHHHHH--hhhhhccCCcceEEEccCCcEEEcccccceeehhhh
Confidence 87765432 4667899999999999999999999995 5799999999999999999999999999743
Q ss_pred -----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCC
Q 003594 616 -----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWP 667 (808)
Q Consensus 616 -----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p 667 (808)
..|+.+|||||||+.+.||.+++.||..- . .....+.+++....+..|
T Consensus 204 Akt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w--~--tpF~qLkqvVeep~P~Lp 274 (282)
T KOG0984|consen 204 AKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESW--G--TPFQQLKQVVEEPSPQLP 274 (282)
T ss_pred HHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhcccccccc--C--CHHHHHHHHhcCCCCCCc
Confidence 36889999999999999999999998641 1 334455666655444443
No 384
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.94 E-value=4.1e-27 Score=253.38 Aligned_cols=210 Identities=19% Similarity=0.275 Sum_probs=170.8
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEcc----CCCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCC
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLN----NGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGN 539 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~----~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gs 539 (808)
+++|.|.||+||-|.. +|+.||||++. +.....++.+|+.||.+++||.||.|-..|+. ..++|||-+. |+
T Consensus 570 evLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~-GD 648 (888)
T KOG4236|consen 570 EVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLH-GD 648 (888)
T ss_pred hhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhc-ch
Confidence 5679999999999998 78999999997 34556789999999999999999999988855 7899999996 56
Q ss_pred HHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCC---ccEEEEeCCCccc-
Q 003594 540 LRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRN---LVAKISGLGLNIC- 615 (808)
Q Consensus 540 L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~---~~~kl~DfGla~~- 615 (808)
+.++|.. ...+.|++.....++.||+.||.|||. ++|+|+||||+||||... -.+||||||+|+.
T Consensus 649 MLEMILS--------sEkgRL~er~TkFlvtQIL~ALr~LH~---knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiI 717 (888)
T KOG4236|consen 649 MLEMILS--------SEKGRLPERITKFLVTQILVALRYLHF---KNIVHCDLKPENVLLASASPFPQVKLCDFGFARII 717 (888)
T ss_pred HHHHHHH--------hhcccchHHHHHHHHHHHHHHHHHhhh---cceeeccCCchheeeccCCCCCceeeccccceeec
Confidence 5555543 356779999999999999999999999 779999999999999643 5899999999975
Q ss_pred -----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhcc---CCCCCChh
Q 003594 616 -----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDG---NAGIWPLD 669 (808)
Q Consensus 616 -----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~---~~~~~p~~ 669 (808)
.+|+..-|+||.|||+|--++|..||...++. -.++.+. ..+..-.+
T Consensus 718 gEksFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEdEdI-------ndQIQNAaFMyPp~PW~e 790 (888)
T KOG4236|consen 718 GEKSFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNEDEDI-------NDQIQNAAFMYPPNPWSE 790 (888)
T ss_pred chhhhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCccch-------hHHhhccccccCCCchhh
Confidence 45788899999999999999999999753321 1112111 11122236
Q ss_pred hHHHHHHHHHHhhccCCCcCccccHHhhH
Q 003594 670 LAEELAGIALKCLSADQDANRDLRIAGVM 698 (808)
Q Consensus 670 ~~~~l~~Li~~Cl~~dp~p~~Rps~~evl 698 (808)
++....+||...|+.. =+.|-+....+
T Consensus 791 is~~AidlIn~LLqVk--m~kRysvdk~l 817 (888)
T KOG4236|consen 791 ISPEAIDLINNLLQVK--MRKRYSVDKSL 817 (888)
T ss_pred cCHHHHHHHHHHHHHH--HHHhcchHhhc
Confidence 8889999999999988 78888876554
No 385
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.94 E-value=1.6e-26 Score=219.16 Aligned_cols=163 Identities=21% Similarity=0.301 Sum_probs=140.2
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccC----CCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCC
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNN----GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGN 539 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~----~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gs 539 (808)
..+|+|.||+||+|+. ++..||+|.++- ..-+....+|+-+|+.+.|.|||+++++... ...||+|||. .+
T Consensus 8 ekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~cd-qd 86 (292)
T KOG0662|consen 8 EKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCD-QD 86 (292)
T ss_pred HhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHHhh-HH
Confidence 3467999999999997 578999999982 2224678999999999999999999998743 7889999996 68
Q ss_pred HHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc----
Q 003594 540 LRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC---- 615 (808)
Q Consensus 540 L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~---- 615 (808)
|..+.. .-.+.++......++.|+++||.|.|++ ++.||||||.|.||+.||..|++|||+++.
T Consensus 87 lkkyfd---------slng~~d~~~~rsfmlqllrgl~fchsh---nvlhrdlkpqnllin~ngelkladfglarafgip 154 (292)
T KOG0662|consen 87 LKKYFD---------SLNGDLDPEIVRSFMLQLLRGLGFCHSH---NVLHRDLKPQNLLINRNGELKLADFGLARAFGIP 154 (292)
T ss_pred HHHHHH---------hcCCcCCHHHHHHHHHHHHhhhhhhhhh---hhhhccCCcceEEeccCCcEEecccchhhhcCCc
Confidence 888874 3456789999999999999999999994 599999999999999999999999999864
Q ss_pred ----------------------CCCCcchhhHhHHHHHHHHHc-CCCCchh
Q 003594 616 ----------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGL 643 (808)
Q Consensus 616 ----------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~ 643 (808)
.-|+...|+||-|||+.|+.. |+|.|..
T Consensus 155 vrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg 205 (292)
T KOG0662|consen 155 VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG 205 (292)
T ss_pred eEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCC
Confidence 237889999999999999987 7776643
No 386
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.94 E-value=2e-26 Score=241.24 Aligned_cols=227 Identities=21% Similarity=0.321 Sum_probs=191.3
Q ss_pred cccccCCceEEEEEEEC-------CeEEEEEEccCCCCH---HHHHHHHHHHhccCCCCccceeecccc---ceEEEEee
Q 003594 468 RLKCAGDWTNVYRGRLN-------HASVAIKTLNNGLSE---EDFQAKVSFLTAVRHPHLVAVMGCCSE---LKCIVFEY 534 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~~-------~~~vAiK~l~~~~~~---~~~~~Ei~il~~l~HpnIv~l~g~~~~---~~~lV~Ey 534 (808)
.++.+|.||.||+|.|. .+.|-+|.++...++ ..|..|.-.|-.+.|||+..+.|++.+ .++.+|.+
T Consensus 290 ~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~~~~P~V~y~~ 369 (563)
T KOG1024|consen 290 CLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIEDYATPFVLYPA 369 (563)
T ss_pred hhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEeeccCcceEEEec
Confidence 34568999999999772 256888888755443 568889999999999999999999965 78899999
Q ss_pred cCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCcc
Q 003594 535 MPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNI 614 (808)
Q Consensus 535 ~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~ 614 (808)
+.-|+|..+|.-.+ .........++-.+...++.|++.|+.|||+ .+|||.||...|++||+...+||+|-.+++
T Consensus 370 ~~~gNLK~FL~~Cr--~~~~~~aqtvtt~qlV~masQla~am~hlh~---~~ViHkDiAaRNCvIdd~LqVkltDsaLSR 444 (563)
T KOG1024|consen 370 TGVGNLKSFLQICR--GDDPSYAQTVTTIQLVLMASQLAMAMEHLHN---HGVIHKDIAARNCVIDDQLQVKLTDSALSR 444 (563)
T ss_pred cCcchHHHHHHHhc--cCCCccccchhHHHHHHHHHHHHHHHHHHHh---cCcccchhhhhcceehhheeEEeccchhcc
Confidence 99999999997332 1111455678888999999999999999999 559999999999999999999999998886
Q ss_pred c---------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHHHhccCCCCC
Q 003594 615 C---------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNAGIW 666 (808)
Q Consensus 615 ~---------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~~ld~~~~~~ 666 (808)
. ..|+..+|||||||+||||+| |+.|+...+ ..+....+.|+.+...
T Consensus 445 DLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeID-----PfEm~~ylkdGyRlaQ 519 (563)
T KOG1024|consen 445 DLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEID-----PFEMEHYLKDGYRLAQ 519 (563)
T ss_pred ccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccC-----HHHHHHHHhccceecC
Confidence 3 358899999999999999999 888987642 2344456678888889
Q ss_pred ChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHHHH
Q 003594 667 PLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVRK 706 (808)
Q Consensus 667 p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~~ 706 (808)
|.+|++++..++..||... |.+||++.|+...|.++..
T Consensus 520 P~NCPDeLf~vMacCWall--peeRPsf~Qlv~cLseF~~ 557 (563)
T KOG1024|consen 520 PFNCPDELFTVMACCWALL--PEERPSFSQLVICLSEFHT 557 (563)
T ss_pred CCCCcHHHHHHHHHHHhcC--cccCCCHHHHHHHHHHHHH
Confidence 9999999999999999999 9999999999999988754
No 387
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=2.8e-27 Score=254.32 Aligned_cols=205 Identities=19% Similarity=0.235 Sum_probs=176.8
Q ss_pred ccccCCceEEEEEEECCeE--EEEEEcc-----CCCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCC
Q 003594 469 LKCAGDWTNVYRGRLNHAS--VAIKTLN-----NGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGN 539 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~~~~~--vAiK~l~-----~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gs 539 (808)
-+|-||||.|=++..++.. +|+|+++ +....+.+..|-.||..++.|.||++|-.|.+ +.|++||-|-||.
T Consensus 427 TLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmEaClGGE 506 (732)
T KOG0614|consen 427 TLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLMEACLGGE 506 (732)
T ss_pred hcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHHhhcCch
Confidence 3477889999999986654 8999887 33446778999999999999999999999977 7889999999999
Q ss_pred HHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc----
Q 003594 540 LRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC---- 615 (808)
Q Consensus 540 L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~---- 615 (808)
|...|. ..+.++..+...|+..++.|+.|||+ ++||.|||||+|.+||.+|-+||.|||+|+.
T Consensus 507 lWTiLr----------dRg~Fdd~tarF~~acv~EAfeYLH~---k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g 573 (732)
T KOG0614|consen 507 LWTILR----------DRGSFDDYTARFYVACVLEAFEYLHR---KGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG 573 (732)
T ss_pred hhhhhh----------hcCCcccchhhhhHHHHHHHHHHHHh---cCceeccCChhheeeccCCceEEeehhhHHHhccC
Confidence 999994 55678888899999999999999999 6799999999999999999999999999964
Q ss_pred --------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhcc-CCCCCChhhHHHH
Q 003594 616 --------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDG-NAGIWPLDLAEEL 674 (808)
Q Consensus 616 --------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~-~~~~~p~~~~~~l 674 (808)
.+.+..+|.||||+++|||+||.|||..++. ...+..++.+ ....||..++...
T Consensus 574 ~KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dp-----mktYn~ILkGid~i~~Pr~I~k~a 648 (732)
T KOG0614|consen 574 RKTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDP-----MKTYNLILKGIDKIEFPRRITKTA 648 (732)
T ss_pred CceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCch-----HHHHHHHHhhhhhhhcccccchhH
Confidence 2467889999999999999999999987643 2344455555 3456888999999
Q ss_pred HHHHHHhhccCCCcCcccc
Q 003594 675 AGIALKCLSADQDANRDLR 693 (808)
Q Consensus 675 ~~Li~~Cl~~dp~p~~Rps 693 (808)
.+||.+.|..+ |.+|..
T Consensus 649 ~~Lik~LCr~~--P~ERLG 665 (732)
T KOG0614|consen 649 TDLIKKLCRDN--PTERLG 665 (732)
T ss_pred HHHHHHHHhcC--cHhhhc
Confidence 99999999999 888875
No 388
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.93 E-value=3e-26 Score=267.89 Aligned_cols=233 Identities=15% Similarity=0.116 Sum_probs=148.9
Q ss_pred hhccccccccccccCCceEEEEEEE--C----CeEEEEEEccCCCCHHHHHHHHHHHhccCCCCccceeecc--------
Q 003594 459 ATEDFSERFRLKCAGDWTNVYRGRL--N----HASVAIKTLNNGLSEEDFQAKVSFLTAVRHPHLVAVMGCC-------- 524 (808)
Q Consensus 459 at~~f~~~~~i~g~G~~g~Vy~~~~--~----~~~vAiK~l~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~-------- 524 (808)
..++|... +.+|+|+||.||+|.+ + +..||||++......+.+..+ .+....+.+++.++..+
T Consensus 130 ~~~~y~l~-~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~~ 206 (566)
T PLN03225 130 KKDDFVLG-KKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAVEIWMNE--RVRRACPNSCADFVYGFLEPVSSKK 206 (566)
T ss_pred ccCCeEEe-EEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchhHHHHHH--HHHhhchhhHHHHHHhhhccccccc
Confidence 44566554 5678999999999998 4 679999998743332222222 12222333333332221
Q ss_pred ccceEEEEeecCCCCHHHHHhhcccccc----------ccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCC
Q 003594 525 SELKCIVFEYMPNGNLRDKLFTSQRNYK----------NCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTP 594 (808)
Q Consensus 525 ~~~~~lV~Ey~~~gsL~~~l~~~~~~~~----------~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp 594 (808)
....+|||||+++++|.+++......+. .........+..+..|+.||+.||.|||+ .+|+||||||
T Consensus 207 ~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~---~gIiHRDLKP 283 (566)
T PLN03225 207 EDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHS---TGIVHRDVKP 283 (566)
T ss_pred CCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHH---CCEEeCcCCH
Confidence 2268999999999999999964311000 00011112344566899999999999999 6699999999
Q ss_pred CCcccCC-CccEEEEeCCCcccC------------------------------------------------CCCcchhhH
Q 003594 595 SSILLDR-NLVAKISGLGLNICD------------------------------------------------QLNVRSDIR 625 (808)
Q Consensus 595 ~NILld~-~~~~kl~DfGla~~~------------------------------------------------~~t~ksDVw 625 (808)
+|||++. ++.+||+|||+|+.. .++.++|||
T Consensus 284 ~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~DVw 363 (566)
T PLN03225 284 QNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFDIY 363 (566)
T ss_pred HHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcccH
Confidence 9999985 689999999998520 122346999
Q ss_pred hHHHHHHHHHcCCCCchhhHHHh-------hhcHHHHHHHhccCC-CC------CChhhHHHHHHHHHHhhccCCCcCcc
Q 003594 626 AFGTLLLHLLTGRNWAGLVEKAM-------ALDQTTLMQVLDGNA-GI------WPLDLAEELAGIALKCLSADQDANRD 691 (808)
Q Consensus 626 S~Gvil~elltG~~P~~~~~~~~-------~~~~~~~~~~ld~~~-~~------~p~~~~~~l~~Li~~Cl~~dp~p~~R 691 (808)
||||+||||+++..|+....... ..+...+...+.+.. .. ..........+|+.+||++| |++|
T Consensus 364 SlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~dLi~~mL~~d--P~kR 441 (566)
T PLN03225 364 SAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPRASPDLRRGFEVLDLDGGAGWELLKSMMRFK--GRQR 441 (566)
T ss_pred HHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccccchhhhhhhhhccccchHHHHHHHHHccCC--cccC
Confidence 99999999999876654321100 001111112221110 00 00012234568999999999 9999
Q ss_pred ccHHhhHH
Q 003594 692 LRIAGVMK 699 (808)
Q Consensus 692 ps~~evl~ 699 (808)
||+.++++
T Consensus 442 ~ta~e~L~ 449 (566)
T PLN03225 442 ISAKAALA 449 (566)
T ss_pred CCHHHHhC
Confidence 99999886
No 389
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.93 E-value=2.7e-25 Score=254.14 Aligned_cols=236 Identities=16% Similarity=0.175 Sum_probs=164.4
Q ss_pred hhccccccccccccCCceEEEEEEE------------------CCeEEEEEEccCCC--CHHH--------------HHH
Q 003594 459 ATEDFSERFRLKCAGDWTNVYRGRL------------------NHASVAIKTLNNGL--SEED--------------FQA 504 (808)
Q Consensus 459 at~~f~~~~~i~g~G~~g~Vy~~~~------------------~~~~vAiK~l~~~~--~~~~--------------~~~ 504 (808)
.+++|.... ++|+|+||.||+|.+ .++.||||++.... ..++ +..
T Consensus 143 ~~d~F~i~~-~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~v 221 (507)
T PLN03224 143 SSDDFQLRD-KLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMV 221 (507)
T ss_pred cccCceEee-EeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHH
Confidence 466787764 557899999999974 24679999987321 1122 344
Q ss_pred HHHHHhccCCCCc-----cceeecccc----------ceEEEEeecCCCCHHHHHhhcccccc--------------ccc
Q 003594 505 KVSFLTAVRHPHL-----VAVMGCCSE----------LKCIVFEYMPNGNLRDKLFTSQRNYK--------------NCS 555 (808)
Q Consensus 505 Ei~il~~l~HpnI-----v~l~g~~~~----------~~~lV~Ey~~~gsL~~~l~~~~~~~~--------------~~~ 555 (808)
|+.++.+++|.++ ++++++|.. ..+|||||+++|+|.++|+....... ...
T Consensus 222 E~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~ 301 (507)
T PLN03224 222 EAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNM 301 (507)
T ss_pred HHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhc
Confidence 7777778876654 677787742 57999999999999999975321000 001
Q ss_pred cCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--------------------
Q 003594 556 RARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-------------------- 615 (808)
Q Consensus 556 ~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-------------------- 615 (808)
....++|..+..|+.|++.||.|||+ .+|+||||||+|||++.++.+||+|||++..
T Consensus 302 ~~~~~~~~~~~~i~~ql~~aL~~lH~---~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~a 378 (507)
T PLN03224 302 PQDKRDINVIKGVMRQVLTGLRKLHR---IGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSP 378 (507)
T ss_pred ccccCCHHHHHHHHHHHHHHHHHHHH---CCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeC
Confidence 12346888999999999999999999 5699999999999999999999999998742
Q ss_pred -CC-------------------------C--CcchhhHhHHHHHHHHHcCCC-CchhhHHH---h---hhcHHHHHHHhc
Q 003594 616 -DQ-------------------------L--NVRSDIRAFGTLLLHLLTGRN-WAGLVEKA---M---ALDQTTLMQVLD 660 (808)
Q Consensus 616 -~~-------------------------~--t~ksDVwS~Gvil~elltG~~-P~~~~~~~---~---~~~~~~~~~~ld 660 (808)
+. + ..+.||||+|||+|+|++|.. ||...... . ..+...+.. ..
T Consensus 379 PE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~-~~ 457 (507)
T PLN03224 379 PEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRM-YK 457 (507)
T ss_pred hhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHh-hc
Confidence 00 0 124699999999999999874 66432110 0 001111111 11
Q ss_pred cCCCCC--ChhhHHHHHHHHHHhhccCC-CcCccccHHhhHH
Q 003594 661 GNAGIW--PLDLAEELAGIALKCLSADQ-DANRDLRIAGVMK 699 (808)
Q Consensus 661 ~~~~~~--p~~~~~~l~~Li~~Cl~~dp-~p~~Rps~~evl~ 699 (808)
.....+ ....++...+|+.++|..+| .|+.|+|+.+++.
T Consensus 458 ~~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 458 GQKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred ccCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 111122 23567899999999999863 3578999999875
No 390
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92 E-value=1.8e-25 Score=229.44 Aligned_cols=217 Identities=24% Similarity=0.347 Sum_probs=178.7
Q ss_pred ccccccccccccCCceEEEEEEE--CCeEEEEEEcc-----CCCCHHHHHHHHHHHhcc-CCCCccceeecccc--ceEE
Q 003594 461 EDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLN-----NGLSEEDFQAKVSFLTAV-RHPHLVAVMGCCSE--LKCI 530 (808)
Q Consensus 461 ~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~-----~~~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~~~l 530 (808)
++|.- ++++|+|+|+.|..+++ +.+.+|+|+++ .+.+.+-.+.|-.+..+. +||.+|-|..+|.. .+++
T Consensus 250 ~df~l-l~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 250 QDFDL-LRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccee-eeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 34433 57789999999999998 67899999987 233344566777777766 79999999999865 7899
Q ss_pred EEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeC
Q 003594 531 VFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGL 610 (808)
Q Consensus 531 V~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~Df 610 (808)
|.||++||+|.=++ .....|+++.+..+..+|+.||.|||+ +|||.||||.+|+|||..|++||.||
T Consensus 329 vieyv~ggdlmfhm----------qrqrklpeeharfys~ei~lal~flh~---rgiiyrdlkldnvlldaeghikltdy 395 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHM----------QRQRKLPEEHARFYSAEICLALNFLHE---RGIIYRDLKLDNVLLDAEGHIKLTDY 395 (593)
T ss_pred EEEEecCcceeeeh----------hhhhcCcHHHhhhhhHHHHHHHHHHhh---cCeeeeeccccceEEccCCceeeccc
Confidence 99999999998777 456779999999999999999999999 77999999999999999999999999
Q ss_pred CCccc-------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHH--HhhhcHHHHHHHhccCC
Q 003594 611 GLNIC-------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEK--AMALDQTTLMQVLDGNA 663 (808)
Q Consensus 611 Gla~~-------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~--~~~~~~~~~~~~ld~~~ 663 (808)
|+++. ..|+..+|+|+|||+++||+.|+.||+.+.. ........+.+++-...
T Consensus 396 gmcke~l~~gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvilekq 475 (593)
T KOG0695|consen 396 GMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVILEKQ 475 (593)
T ss_pred chhhcCCCCCcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHHhhhc
Confidence 99853 4588999999999999999999999986532 11122344555555556
Q ss_pred CCCChhhHHHHHHHHHHhhccCCCcCcccc
Q 003594 664 GIWPLDLAEELAGIALKCLSADQDANRDLR 693 (808)
Q Consensus 664 ~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps 693 (808)
..+|...+-....++...|++| |.+|..
T Consensus 476 iriprslsvkas~vlkgflnkd--p~erlg 503 (593)
T KOG0695|consen 476 IRIPRSLSVKASHVLKGFLNKD--PKERLG 503 (593)
T ss_pred ccccceeehhhHHHHHHhhcCC--cHHhcC
Confidence 6678888888999999999999 777764
No 391
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.92 E-value=5.5e-26 Score=257.94 Aligned_cols=228 Identities=26% Similarity=0.332 Sum_probs=169.0
Q ss_pred ccccccccccccCCce-EEEEEEECCeEEEEEEccCCCCHHHHHHHHHHHhcc-CCCCccceeecccc--ceEEEEeecC
Q 003594 461 EDFSERFRLKCAGDWT-NVYRGRLNHASVAIKTLNNGLSEEDFQAKVSFLTAV-RHPHLVAVMGCCSE--LKCIVFEYMP 536 (808)
Q Consensus 461 ~~f~~~~~i~g~G~~g-~Vy~~~~~~~~vAiK~l~~~~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~~~lV~Ey~~ 536 (808)
..|....+++|.|+.| .||+|.+.|+.||||++-.. ...-..+||..|..- +|||||++|+.-.+ ..||..|.|.
T Consensus 508 k~~~~~~eilG~Gs~Gt~Vf~G~ye~R~VAVKrll~e-~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~ 586 (903)
T KOG1027|consen 508 KLFFSPKEILGYGSNGTVVFRGVYEGREVAVKRLLEE-FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA 586 (903)
T ss_pred eeeeccHHHcccCCCCcEEEEEeeCCceehHHHHhhH-hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh
Confidence 4455555677777665 48999999999999998622 234567999999988 69999999988765 7899999996
Q ss_pred CCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCC-----CccEEEEeCC
Q 003594 537 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDR-----NLVAKISGLG 611 (808)
Q Consensus 537 ~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~-----~~~~kl~DfG 611 (808)
.+|.+++..... . ...... ...+.++.|++.||++||+ .+||||||||.||||+. ...++|+|||
T Consensus 587 -~sL~dlie~~~~--d-~~~~~~---i~~~~~l~q~~~GlaHLHs---l~iVHRDLkPQNILI~~~~~~~~~ra~iSDfg 656 (903)
T KOG1027|consen 587 -CSLQDLIESSGL--D-VEMQSD---IDPISVLSQIASGLAHLHS---LKIVHRDLKPQNILISVPSADGTLRAKISDFG 656 (903)
T ss_pred -hhHHHHHhcccc--c-hhhccc---ccHHHHHHHHHHHHHHHHh---cccccccCCCceEEEEccCCCcceeEEecccc
Confidence 799999965300 0 011111 3346789999999999999 56999999999999975 2589999999
Q ss_pred Cccc----------------------------CCCCcchhhHhHHHHHHHHHcC-CCCchhhHHHhhhcHHHHHHHhccC
Q 003594 612 LNIC----------------------------DQLNVRSDIRAFGTLLLHLLTG-RNWAGLVEKAMALDQTTLMQVLDGN 662 (808)
Q Consensus 612 la~~----------------------------~~~t~ksDVwS~Gvil~elltG-~~P~~~~~~~~~~~~~~~~~~ld~~ 662 (808)
+++. ..-+..+||||||||+|+.++| .+||+..-.. -..++.+.
T Consensus 657 lsKkl~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R-------~~NIl~~~ 729 (903)
T KOG1027|consen 657 LSKKLAGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLER-------QANILTGN 729 (903)
T ss_pred cccccCCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHh-------hhhhhcCc
Confidence 9964 1234578999999999999995 8999864321 12233321
Q ss_pred CCCC---C-hhhHHHHHHHHHHhhccCCCcCccccHHhhH---------HHHHHHHHhccc
Q 003594 663 AGIW---P-LDLAEELAGIALKCLSADQDANRDLRIAGVM---------KELDEVRKKADG 710 (808)
Q Consensus 663 ~~~~---p-~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl---------~~L~~l~~~~~~ 710 (808)
.... | .++ +..+||.+|+.++ |..||++.+|+ +.|.-+++..+.
T Consensus 730 ~~L~~L~~~~d~--eA~dLI~~ml~~d--P~~RPsa~~VL~HPlFW~~ekrL~Fl~dvSDR 786 (903)
T KOG1027|consen 730 YTLVHLEPLPDC--EAKDLISRMLNPD--PQLRPSATDVLNHPLFWDSEKRLSFLRDVSDR 786 (903)
T ss_pred cceeeeccCchH--HHHHHHHHhcCCC--cccCCCHHHHhCCCccCChHHHHHHHHhhhhh
Confidence 1110 1 112 8899999999999 99999999998 466666655443
No 392
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.92 E-value=3.2e-25 Score=217.77 Aligned_cols=213 Identities=19% Similarity=0.316 Sum_probs=167.1
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCCCCHHHHHHHHHHHhccC-CCCccceeecccc----ceEEEEeecCCCCH
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNGLSEEDFQAKVSFLTAVR-HPHLVAVMGCCSE----LKCIVFEYMPNGNL 540 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~~~~~~~~Ei~il~~l~-HpnIv~l~g~~~~----~~~lV~Ey~~~gsL 540 (808)
+-+|+|-|+.||-|.. ++..++||++++ ...+.+.+|+.||..|+ ||||++|+++..+ .+.||+||+.+.+.
T Consensus 44 rk~GRGKYSEVFeg~~~~~~eK~ViKiLKP-VkkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLiFE~v~n~Df 122 (338)
T KOG0668|consen 44 RKVGRGKYSEVFEGINITNNEKCVIKILKP-VKKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLIFEYVNNTDF 122 (338)
T ss_pred HHHcCccHhhHhcccccCCCceEEEeeech-HHHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhHhhhhccccH
Confidence 3457999999999995 789999999973 34578999999999997 9999999999866 56899999999887
Q ss_pred HHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCC-ccEEEEeCCCccc----
Q 003594 541 RDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRN-LVAKISGLGLNIC---- 615 (808)
Q Consensus 541 ~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~-~~~kl~DfGla~~---- 615 (808)
..+. +.|+-..+..++.+++.||.|+|+ .||+|||+||.|++||.. -.++|+|+|+|..
T Consensus 123 k~ly-------------~tl~d~dIryY~~elLkALdyCHS---~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~ 186 (338)
T KOG0668|consen 123 KQLY-------------PTLTDYDIRYYIYELLKALDYCHS---MGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPG 186 (338)
T ss_pred HHHh-------------hhhchhhHHHHHHHHHHHHhHHHh---cCcccccCCcceeeechhhceeeeeecchHhhcCCC
Confidence 7655 346777888999999999999999 679999999999999854 5899999999854
Q ss_pred ---------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHH--------HhhhcHHHHHHHhcc-----
Q 003594 616 ---------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEK--------AMALDQTTLMQVLDG----- 661 (808)
Q Consensus 616 ---------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~--------~~~~~~~~~~~~ld~----- 661 (808)
..|+..-|+|||||+|..|+..+.||..... +.......+...+..
T Consensus 187 ~eYnVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkIakVLGt~el~~Yl~KY~i~L 266 (338)
T KOG0668|consen 187 KEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKIAKVLGTDELYAYLNKYQIDL 266 (338)
T ss_pred ceeeeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHHHHHhChHHHHHHHHHHccCC
Confidence 3477889999999999999999999853111 111111222222111
Q ss_pred -----------CCCCCCh--------hhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 662 -----------NAGIWPL--------DLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 662 -----------~~~~~p~--------~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
....|.. -.+++..+|+.+.|.+| ..+|||+.|.+.
T Consensus 267 dp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYD--HqeRlTakEam~ 321 (338)
T KOG0668|consen 267 DPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYD--HQERLTAKEAMA 321 (338)
T ss_pred ChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhc--cccccchHHHhc
Confidence 1112211 23578999999999999 899999998874
No 393
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.91 E-value=9.8e-25 Score=219.32 Aligned_cols=224 Identities=18% Similarity=0.233 Sum_probs=170.3
Q ss_pred cccccccccCCceEEEEEEEC--CeEEEEEEcc-CCCCHHHHHHHHHHHhcc-CCCCccceeecc-c--cceEEEEeecC
Q 003594 464 SERFRLKCAGDWTNVYRGRLN--HASVAIKTLN-NGLSEEDFQAKVSFLTAV-RHPHLVAVMGCC-S--ELKCIVFEYMP 536 (808)
Q Consensus 464 ~~~~~i~g~G~~g~Vy~~~~~--~~~vAiK~l~-~~~~~~~~~~Ei~il~~l-~HpnIv~l~g~~-~--~~~~lV~Ey~~ 536 (808)
+..++++|.|.||.+.++.+. .+.+++|-++ +.....+|.+|..---.| .|.||+.-|++- . +.+++++||+|
T Consensus 26 y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~qE~aP 105 (378)
T KOG1345|consen 26 YTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFVQEFAP 105 (378)
T ss_pred hhHHHHhcccceeeEEeeeccCCceEEEeeccCcchhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEeeccCc
Confidence 344678899999999999994 5789999998 455678999998765555 589999888664 3 36778999999
Q ss_pred CCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccC--CCccEEEEeCCCcc
Q 003594 537 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLD--RNLVAKISGLGLNI 614 (808)
Q Consensus 537 ~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld--~~~~~kl~DfGla~ 614 (808)
.|+|..-+. ...+.+....+++.|+++||.|||+ +++||||||.+||||- +...+||||||+++
T Consensus 106 ~gdL~snv~-----------~~GigE~~~K~v~~ql~SAi~fMHs---knlVHRdlK~eNiLif~~df~rvKlcDFG~t~ 171 (378)
T KOG1345|consen 106 RGDLRSNVE-----------AAGIGEANTKKVFAQLLSAIEFMHS---KNLVHRDLKAENILIFDADFYRVKLCDFGLTR 171 (378)
T ss_pred cchhhhhcC-----------cccccHHHHHHHHHHHHHHHHHhhc---cchhhcccccceEEEecCCccEEEeeeccccc
Confidence 999998772 3557888889999999999999999 7799999999999993 34599999999985
Q ss_pred c---------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCC
Q 003594 615 C---------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWP 667 (808)
Q Consensus 615 ~---------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p 667 (808)
. ....+.+|||.||+|+|.++||++||... +.....-..+.....+..+..|
T Consensus 172 k~g~tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka-~~~d~~Y~~~~~w~~rk~~~~P 250 (378)
T KOG1345|consen 172 KVGTTVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKA-SIMDKPYWEWEQWLKRKNPALP 250 (378)
T ss_pred ccCceehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhh-hccCchHHHHHHHhcccCccCc
Confidence 4 12468899999999999999999999732 2111112233444444333333
Q ss_pred h---hhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHH
Q 003594 668 L---DLAEELAGIALKCLSADQDANRDLRIAGVMKELDEV 704 (808)
Q Consensus 668 ~---~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l 704 (808)
. ..++.+..+..+-|..+ +.+|-.+.++.+.-..+
T Consensus 251 ~~F~~fs~~a~r~Fkk~lt~~--~~drcki~~~kk~rk~~ 288 (378)
T KOG1345|consen 251 KKFNPFSEKALRLFKKSLTPR--FKDRCKIWTAKKMRKCL 288 (378)
T ss_pred hhhcccCHHHHHHHHHhcCCc--ccccchhHHHHHHHHHH
Confidence 3 46778888888888888 77775555555554433
No 394
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.91 E-value=8e-24 Score=213.23 Aligned_cols=180 Identities=29% Similarity=0.453 Sum_probs=159.7
Q ss_pred cccCCceEEEEEEEC--CeEEEEEEccCCCC---HHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCHHH
Q 003594 470 KCAGDWTNVYRGRLN--HASVAIKTLNNGLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNLRD 542 (808)
Q Consensus 470 ~g~G~~g~Vy~~~~~--~~~vAiK~l~~~~~---~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL~~ 542 (808)
+|+|++|.||++... +..+++|++..... ...+.+|+.++..+.|++|+++++++.. ..+++|||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 368999999999995 89999999985443 4789999999999999999999999976 7899999999999999
Q ss_pred HHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCC-CccEEEEeCCCccc------
Q 003594 543 KLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDR-NLVAKISGLGLNIC------ 615 (808)
Q Consensus 543 ~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~-~~~~kl~DfGla~~------ 615 (808)
++... ...+++..+..++.+++.+|.|||+ .+++|+||+|.||+++. ++.++|+|||.+..
T Consensus 81 ~~~~~---------~~~~~~~~~~~~~~~l~~~l~~lh~---~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~ 148 (215)
T cd00180 81 LLKEN---------EGKLSEDEILRILLQILEGLEYLHS---NGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS 148 (215)
T ss_pred HHHhc---------cCCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc
Confidence 99432 1468999999999999999999999 56999999999999999 89999999998752
Q ss_pred -------------------C-CCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHHHH
Q 003594 616 -------------------D-QLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELA 675 (808)
Q Consensus 616 -------------------~-~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~ 675 (808)
. ..+.++|+|+||+++++| ..+.
T Consensus 149 ~~~~~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l-------------------------------------~~~~ 191 (215)
T cd00180 149 LLKTIVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL-------------------------------------PELK 191 (215)
T ss_pred hhhcccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH-------------------------------------HHHH
Confidence 1 455789999999999998 6889
Q ss_pred HHHHHhhccCCCcCccccHHhhHHH
Q 003594 676 GIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 676 ~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
+++.+|+..+ |..||++.++++.
T Consensus 192 ~~l~~~l~~~--p~~R~~~~~l~~~ 214 (215)
T cd00180 192 DLIRKMLQKD--PEKRPSAKEILEH 214 (215)
T ss_pred HHHHHHhhCC--cccCcCHHHHhhC
Confidence 9999999999 9999999998764
No 395
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.91 E-value=1e-25 Score=225.90 Aligned_cols=161 Identities=21% Similarity=0.301 Sum_probs=140.9
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccC----CCCHHHHHHHHHHHhccCCCCccceeecccc-------ceEEEEee
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNN----GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE-------LKCIVFEY 534 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~----~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~-------~~~lV~Ey 534 (808)
+-+|-|+||.||.+.+ +|+.||+|++.. -.+.+.+.+|+.+|.-++|.|++..+++..- ..|+|+|.
T Consensus 59 RPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~TEL 138 (449)
T KOG0664|consen 59 RPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVLTEL 138 (449)
T ss_pred CcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHHHHH
Confidence 4567899999999998 789999999872 2345789999999999999999999887632 56889999
Q ss_pred cCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCcc
Q 003594 535 MPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNI 614 (808)
Q Consensus 535 ~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~ 614 (808)
|. .+|...| -....|+-..+.-++.||++||.|||+ -+|+||||||.|.|++.|..+||||||+++
T Consensus 139 mQ-SDLHKII----------VSPQ~Ls~DHvKVFlYQILRGLKYLHs---A~ILHRDIKPGNLLVNSNCvLKICDFGLAR 204 (449)
T KOG0664|consen 139 MQ-SDLHKII----------VSPQALTPDHVKVFVYQILRGLKYLHT---ANILHRDIKPGNLLVNSNCILKICDFGLAR 204 (449)
T ss_pred HH-hhhhhee----------ccCCCCCcchhhhhHHHHHhhhHHHhh---cchhhccCCCccEEeccCceEEeccccccc
Confidence 96 6888888 566789999999999999999999999 459999999999999999999999999997
Q ss_pred c---------------------------CCCCcchhhHhHHHHHHHHHcCCCCch
Q 003594 615 C---------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAG 642 (808)
Q Consensus 615 ~---------------------------~~~t~ksDVwS~Gvil~elltG~~P~~ 642 (808)
. ..|+...||||.|||+.||+..+..|.
T Consensus 205 vee~d~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQ 259 (449)
T KOG0664|consen 205 TWDQRDRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQ 259 (449)
T ss_pred ccchhhhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhh
Confidence 5 358899999999999999998886654
No 396
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.91 E-value=7.6e-25 Score=230.20 Aligned_cols=219 Identities=20% Similarity=0.249 Sum_probs=164.0
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccC-CCCHHHHHHHHHHHhccCC--CC----ccceeeccc--cceEEEEeec
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNN-GLSEEDFQAKVSFLTAVRH--PH----LVAVMGCCS--ELKCIVFEYM 535 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~-~~~~~~~~~Ei~il~~l~H--pn----Iv~l~g~~~--~~~~lV~Ey~ 535 (808)
..++|.|.||.|-.+.+ .+..||||+++. ..-.+.-.-|+++|.+|.+ |+ +|.+.++|. .+.|||+|.+
T Consensus 94 ~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghiCivfell 173 (415)
T KOG0671|consen 94 VDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHICIVFELL 173 (415)
T ss_pred hhhhcCCcccceEEEeecCCCceehHHHHHHHHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCceEEEEecc
Confidence 45678999999999998 468999999982 3334556679999999932 32 677777774 3889999999
Q ss_pred CCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCC--------------
Q 003594 536 PNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDR-------------- 601 (808)
Q Consensus 536 ~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~-------------- 601 (808)
|-|+.++|... +..+++...+..|+.|++.+++|||++ +++|-||||+|||+.+
T Consensus 174 -G~S~~dFlk~N--------~y~~fpi~~ir~m~~QL~~sv~fLh~~---kl~HTDLKPENILfvss~~~~~~~~k~~~~ 241 (415)
T KOG0671|consen 174 -GLSTFDFLKEN--------NYIPFPIDHIRHMGYQLLESVAFLHDL---KLTHTDLKPENILFVSSEYFKTYNPKKKVC 241 (415)
T ss_pred -ChhHHHHhccC--------CccccchHHHHHHHHHHHHHHHHHHhc---ceeecCCChheEEEeccceEEEeccCCccc
Confidence 56999999643 567899999999999999999999994 5999999999999931
Q ss_pred ------CccEEEEeCCCccc----------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHh---h-
Q 003594 602 ------NLVAKISGLGLNIC----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAM---A- 649 (808)
Q Consensus 602 ------~~~~kl~DfGla~~----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~---~- 649 (808)
+..++|+|||.|.. -+++.++||||+||||+||.||...|...++.. .
T Consensus 242 ~~r~~ks~~I~vIDFGsAtf~~e~hs~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMM 321 (415)
T KOG0671|consen 242 FIRPLKSTAIKVIDFGSATFDHEHHSTIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMM 321 (415)
T ss_pred eeccCCCcceEEEecCCcceeccCcceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHHHHHHH
Confidence 34689999999965 257899999999999999999998775322100 0
Q ss_pred -----------hcHHHHHHHhccCCCCCCh-------------------------hhHHHHHHHHHHhhccCCCcCcccc
Q 003594 650 -----------LDQTTLMQVLDGNAGIWPL-------------------------DLAEELAGIALKCLSADQDANRDLR 693 (808)
Q Consensus 650 -----------~~~~~~~~~ld~~~~~~p~-------------------------~~~~~l~~Li~~Cl~~dp~p~~Rps 693 (808)
...............+||. ....+|.+|+.++|.+| |.+|+|
T Consensus 322 erIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~fD--P~~RiT 399 (415)
T KOG0671|consen 322 ERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLEFD--PARRIT 399 (415)
T ss_pred HHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHccC--cccccc
Confidence 0000000011111112221 23457999999999999 999999
Q ss_pred HHhhHH
Q 003594 694 IAGVMK 699 (808)
Q Consensus 694 ~~evl~ 699 (808)
+.|++.
T Consensus 400 l~EAL~ 405 (415)
T KOG0671|consen 400 LREALS 405 (415)
T ss_pred HHHHhc
Confidence 998874
No 397
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.89 E-value=7e-24 Score=235.12 Aligned_cols=220 Identities=21% Similarity=0.254 Sum_probs=178.6
Q ss_pred ccccccccccccCCceEEEEEEE--CCeEEEEEEcc--CCCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEee
Q 003594 461 EDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLN--NGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEY 534 (808)
Q Consensus 461 ~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~--~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey 534 (808)
++|.-.. .+|+|+||.|||+++ .+...|+|+++ .......+++|+-+++..+|||||.++|.+.. ..++.|||
T Consensus 15 ddyellq-rvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEy 93 (829)
T KOG0576|consen 15 DDYELLQ-RVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEY 93 (829)
T ss_pred cchhhee-eecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEe
Confidence 3454444 457899999999998 68999999998 44556778899999999999999999999854 88999999
Q ss_pred cCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCcc
Q 003594 535 MPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNI 614 (808)
Q Consensus 535 ~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~ 614 (808)
|.||+|.+..+ -..++++.++...+++.+.||+|||+ .+-+|||||-.|||+++.|.+|++|||.+.
T Consensus 94 cgggslQdiy~----------~TgplselqiayvcRetl~gl~ylhs---~gk~hRdiKGanilltd~gDvklaDfgvsa 160 (829)
T KOG0576|consen 94 CGGGSLQDIYH----------VTGPLSELQIAYVCRETLQGLKYLHS---QGKIHRDIKGANILLTDEGDVKLADFGVSA 160 (829)
T ss_pred cCCCcccceee----------ecccchhHHHHHHHhhhhccchhhhc---CCcccccccccceeecccCceeecccCchh
Confidence 99999999883 56789999999999999999999999 669999999999999999999999999863
Q ss_pred c----------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHH--HHhccCCC
Q 003594 615 C----------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLM--QVLDGNAG 664 (808)
Q Consensus 615 ~----------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~--~~ld~~~~ 664 (808)
. +.|+..+|||++|+...|+---.+|....... ....+. ...++...
T Consensus 161 qitati~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpm---r~l~LmTkS~~qpp~l 237 (829)
T KOG0576|consen 161 QITATIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPM---RALFLMTKSGFQPPTL 237 (829)
T ss_pred hhhhhhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchH---HHHHHhhccCCCCCcc
Confidence 2 57899999999999999999888886543221 111111 11122222
Q ss_pred CCChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 665 IWPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 665 ~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
.-+...++-|.+|+..|+-++ |..||++..++.
T Consensus 238 kDk~kws~~fh~fvK~altkn--pKkRptaeklL~ 270 (829)
T KOG0576|consen 238 KDKTKWSEFFHNFVKGALTKN--PKKRPTAEKLLQ 270 (829)
T ss_pred cCCccchHHHHHHHHHHhcCC--CccCCChhhhee
Confidence 334456789999999999999 889999876653
No 398
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.89 E-value=3e-22 Score=205.55 Aligned_cols=163 Identities=28% Similarity=0.403 Sum_probs=142.1
Q ss_pred cccccCCceEEEEEEEC--CeEEEEEEccCCC---CHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCH
Q 003594 468 RLKCAGDWTNVYRGRLN--HASVAIKTLNNGL---SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNL 540 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~~--~~~vAiK~l~~~~---~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL 540 (808)
..+|.|++|.||+|... +..+|+|.+.... ..+.+.+|+..+.+++|+|++++++++.. ..++++||+++++|
T Consensus 5 ~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~~~~L 84 (225)
T smart00221 5 KKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCEGGDL 84 (225)
T ss_pred eEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccCCCCH
Confidence 45678999999999993 6899999998432 45788999999999999999999999864 78999999999999
Q ss_pred HHHHhhccccccccccCCC-CCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc----
Q 003594 541 RDKLFTSQRNYKNCSRARA-LRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC---- 615 (808)
Q Consensus 541 ~~~l~~~~~~~~~~~~~~~-l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~---- 615 (808)
.+++... .. +++.....++.+++.+|.|||+ .+++|+||+|.||+++.++.++|+|||++..
T Consensus 85 ~~~~~~~----------~~~~~~~~~~~~~~~l~~~l~~lh~---~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~ 151 (225)
T smart00221 85 FDYLRKK----------GGKLSEEEARFYLRQILEALEYLHS---LGIVHRDLKPENILLGMDGLVKLADFGLARFIHRD 151 (225)
T ss_pred HHHHHhc----------ccCCCHHHHHHHHHHHHHHHHHHHh---CCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCc
Confidence 9999532 23 8999999999999999999999 5699999999999999999999999997642
Q ss_pred -----------------------CCCCcchhhHhHHHHHHHHHcCCCCchh
Q 003594 616 -----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGL 643 (808)
Q Consensus 616 -----------------------~~~t~ksDVwS~Gvil~elltG~~P~~~ 643 (808)
..++.++|||+||+++++|++|++||..
T Consensus 152 ~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 152 LAALLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ccccccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 1234689999999999999999999964
No 399
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.88 E-value=5.6e-23 Score=211.60 Aligned_cols=213 Identities=19% Similarity=0.250 Sum_probs=159.5
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccC----CCCHHHHHHHHHHHhccCCCCccceeecccc--------ceEEEEe
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNN----GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--------LKCIVFE 533 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~----~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--------~~~lV~E 533 (808)
+.+|.|.- .|-.+.+ .+++||+|++.. ....+...+|..++..+.|+||++++.+|.- ..|+|||
T Consensus 23 ~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e~y~v~e 101 (369)
T KOG0665|consen 23 KPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQEVYLVME 101 (369)
T ss_pred cccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHhHHHHHH
Confidence 34456654 5666665 689999999862 2234678899999999999999999999832 6799999
Q ss_pred ecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCc
Q 003594 534 YMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 613 (808)
Q Consensus 534 y~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla 613 (808)
||. ++|...+. -.++-.+...|+.|++.|+.|||+ .+|+||||||+||++..++.+||.|||+|
T Consensus 102 ~m~-~nl~~vi~------------~elDH~tis~i~yq~~~~ik~lhs---~~IihRdLkPsnivv~~~~~lKi~dfg~a 165 (369)
T KOG0665|consen 102 LMD-ANLCQVIL------------MELDHETISYILYQMLCGIKHLHS---AGIIHRDLKPSNIVVNSDCTLKILDFGLA 165 (369)
T ss_pred hhh-hHHHHHHH------------HhcchHHHHHHHHHHHHHHHHHHh---cceeecccCcccceecchhheeeccchhh
Confidence 996 79999884 236778889999999999999999 45999999999999999999999999998
Q ss_pred cc------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHH----------HhhhcHHHHHHH-
Q 003594 614 IC------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEK----------AMALDQTTLMQV- 658 (808)
Q Consensus 614 ~~------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~----------~~~~~~~~~~~~- 658 (808)
+. .++.+.+||||+||++.||++|+-.|...+. ....+...+.++
T Consensus 166 r~e~~~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d~idQ~~ki~~~lgtpd~~F~~qL~ 245 (369)
T KOG0665|consen 166 RTEDTDFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKDHIDQWNKIIEQLGTPDPSFMKQLQ 245 (369)
T ss_pred cccCcccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCchHHHHHHHHHHHhcCCCHHHHHHhh
Confidence 64 2478899999999999999999865532110 000000001110
Q ss_pred ------hcc-------------CCCCCC------hhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 659 ------LDG-------------NAGIWP------LDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 659 ------ld~-------------~~~~~p------~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
+.. ....|+ ..-...+.+++.+||-.| |..|.++.++|.
T Consensus 246 ~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~--pe~Risv~daL~ 309 (369)
T KOG0665|consen 246 PTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVID--PEKRISVDDALR 309 (369)
T ss_pred HHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccC--hhhcccHHHHhc
Confidence 000 001122 123456889999999999 999999888774
No 400
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.88 E-value=4.8e-23 Score=222.39 Aligned_cols=182 Identities=21% Similarity=0.276 Sum_probs=146.6
Q ss_pred cccccCHHHHHHhhccccccccccccCCceEEEEEEE--CCeEEEEEEccCCC-CHHHHHHHHHHHhccC------CCCc
Q 003594 447 AFREYAAEDIRLATEDFSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNGL-SEEDFQAKVSFLTAVR------HPHL 517 (808)
Q Consensus 447 ~~~~~~~~ei~~at~~f~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~-~~~~~~~Ei~il~~l~------HpnI 517 (808)
+|..+.+.|+. ++-+......|.|-|++|.+|.+ .|..||||++.... -.+.=+.|++||.+|+ --|+
T Consensus 420 GYYrv~igE~L---D~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE~M~KtGl~EleiLkKL~~AD~Edk~Hc 496 (752)
T KOG0670|consen 420 GYYRVRIGELL---DSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNEVMHKTGLKELEILKKLNDADPEDKFHC 496 (752)
T ss_pred ceEEEehhhhh---cceeEEEeccccceeeeeeeccccCCCCeeEEEEeecchHHhhhhhHHHHHHHHhhccCchhhhHH
Confidence 34445555543 33333344558999999999998 57899999998433 3455678999999994 3478
Q ss_pred cceeeccc--cceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCC
Q 003594 518 VAVMGCCS--ELKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPS 595 (808)
Q Consensus 518 v~l~g~~~--~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~ 595 (808)
++|+-.|. +++|||+|-+. .+|.++|... .....|....+..++.|+.-||..|-.. +|+|.||||+
T Consensus 497 lrl~r~F~hknHLClVFE~Ls-lNLRevLKKy-------G~nvGL~ikaVRsYaqQLflALklLK~c---~vlHaDIKPD 565 (752)
T KOG0670|consen 497 LRLFRHFKHKNHLCLVFEPLS-LNLREVLKKY-------GRNVGLHIKAVRSYAQQLFLALKLLKKC---GVLHADIKPD 565 (752)
T ss_pred HHHHHHhhhcceeEEEehhhh-chHHHHHHHh-------CcccceeehHHHHHHHHHHHHHHHHHhc---CeeecccCcc
Confidence 88887774 48999999995 7999999876 4556688888999999999999999994 5999999999
Q ss_pred CcccCCC-ccEEEEeCCCccc-----------------------CCCCcchhhHhHHHHHHHHHcCCCCch
Q 003594 596 SILLDRN-LVAKISGLGLNIC-----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAG 642 (808)
Q Consensus 596 NILld~~-~~~kl~DfGla~~-----------------------~~~t~ksDVwS~Gvil~elltG~~P~~ 642 (808)
|||++++ ..+||||||.|.. -.|+...|+||.||+||||.||+..|.
T Consensus 566 NiLVNE~k~iLKLCDfGSA~~~~eneitPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFp 636 (752)
T KOG0670|consen 566 NILVNESKNILKLCDFGSASFASENEITPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFP 636 (752)
T ss_pred ceEeccCcceeeeccCccccccccccccHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecC
Confidence 9999864 7899999999853 357889999999999999999997663
No 401
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.88 E-value=6.9e-23 Score=223.86 Aligned_cols=166 Identities=19% Similarity=0.222 Sum_probs=142.2
Q ss_pred cccccccccCCceEEEEEEE--CCeEEEEEEccCCCC----------HHHHHHHHHHHhccC---CCCccceeecccc--
Q 003594 464 SERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNGLS----------EEDFQAKVSFLTAVR---HPHLVAVMGCCSE-- 526 (808)
Q Consensus 464 ~~~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~~----------~~~~~~Ei~il~~l~---HpnIv~l~g~~~~-- 526 (808)
+...+.+|.|+||.|+.+.+ ++..|+||.+....- ...+-.|+.||..++ |+||++++++|++
T Consensus 563 yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEddd 642 (772)
T KOG1152|consen 563 YTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFEDDD 642 (772)
T ss_pred ceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeecCC
Confidence 44556778999999999999 567899999873211 123567999999997 9999999999977
Q ss_pred ceEEEEeec-CCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccE
Q 003594 527 LKCIVFEYM-PNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVA 605 (808)
Q Consensus 527 ~~~lV~Ey~-~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~ 605 (808)
++||+||-. +|-+|.++| ...+.+++..+.-|+.||+.|+++||+ .+|||||||-+|+.+|.+|-+
T Consensus 643 ~yyl~te~hg~gIDLFd~I----------E~kp~m~E~eAk~IFkQV~agi~hlh~---~~ivhrdikdenvivd~~g~~ 709 (772)
T KOG1152|consen 643 YYYLETEVHGEGIDLFDFI----------EFKPRMDEPEAKLIFKQVVAGIKHLHD---QGIVHRDIKDENVIVDSNGFV 709 (772)
T ss_pred eeEEEecCCCCCcchhhhh----------hccCccchHHHHHHHHHHHhccccccc---cCceecccccccEEEecCCeE
Confidence 788999865 467999999 566789999999999999999999999 669999999999999999999
Q ss_pred EEEeCCCccc------------------------CCCCcchhhHhHHHHHHHHHcCCCCch
Q 003594 606 KISGLGLNIC------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAG 642 (808)
Q Consensus 606 kl~DfGla~~------------------------~~~t~ksDVwS~Gvil~elltG~~P~~ 642 (808)
||+|||.|.. ...+..-|||++|++||.++....||.
T Consensus 710 klidfgsaa~~ksgpfd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 710 KLIDFGSAAYTKSGPFDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred EEeeccchhhhcCCCcceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 9999999843 124677899999999999999988875
No 402
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.85 E-value=1.1e-21 Score=240.16 Aligned_cols=167 Identities=16% Similarity=0.178 Sum_probs=123.6
Q ss_pred ccCC-CCccceeeccc---------cceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhh
Q 003594 511 AVRH-PHLVAVMGCCS---------ELKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLH 580 (808)
Q Consensus 511 ~l~H-pnIv~l~g~~~---------~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH 580 (808)
.++| +||+.++++|. +..+++|||+ +++|.++|.. ....+++..++.|+.||+.||.|||
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~---------~~~~~~~~~~~~i~~qi~~al~~lH 97 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDN---------PDRSVDAFECFHVFRQIVEIVNAAH 97 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhc---------ccccccHHHHHHHHHHHHHHHHHHH
Confidence 4455 58888888771 1456788988 5799999942 2456999999999999999999999
Q ss_pred hcCCCCeEecCCCCCCcccC-------------------CCccEEEEeCCCccc--------------------------
Q 003594 581 STEPRPIVHGSLTPSSILLD-------------------RNLVAKISGLGLNIC-------------------------- 615 (808)
Q Consensus 581 ~~~~~~iiHrDLKp~NILld-------------------~~~~~kl~DfGla~~-------------------------- 615 (808)
+ ++|+||||||+||||+ .++.+||+|||+++.
T Consensus 98 ~---~gIvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 174 (793)
T PLN00181 98 S---QGIVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQIL 174 (793)
T ss_pred h---CCeeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccc
Confidence 9 6699999999999994 356678888887631
Q ss_pred ---------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHHHHHHHHH
Q 003594 616 ---------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAGIALK 680 (808)
Q Consensus 616 ---------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~ 680 (808)
..++.++|||||||+||||++|.+|+...... +..+.....+..+.........++.+
T Consensus 175 ~~gt~~Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (793)
T PLN00181 175 AMEMSWYTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSRT-------MSSLRHRVLPPQILLNWPKEASFCLW 247 (793)
T ss_pred cCCCcceEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHHH-------HHHHHHhhcChhhhhcCHHHHHHHHH
Confidence 23678999999999999999999987532211 11111111111111223456788999
Q ss_pred hhccCCCcCccccHHhhHH
Q 003594 681 CLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 681 Cl~~dp~p~~Rps~~evl~ 699 (808)
||..+ |..||++.++++
T Consensus 248 ~L~~~--P~~Rps~~eil~ 264 (793)
T PLN00181 248 LLHPE--PSCRPSMSELLQ 264 (793)
T ss_pred hCCCC--hhhCcChHHHhh
Confidence 99999 999999999974
No 403
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.84 E-value=1.5e-20 Score=202.58 Aligned_cols=122 Identities=27% Similarity=0.370 Sum_probs=104.1
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccCC-CCHHHHHHHHHHHhccC-----C---CCccceeecccc------ceE
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNNG-LSEEDFQAKVSFLTAVR-----H---PHLVAVMGCCSE------LKC 529 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~-~~~~~~~~Ei~il~~l~-----H---pnIv~l~g~~~~------~~~ 529 (808)
.+.+|-|.|++||++.+ +.+.||+|+.+.. .-.+....||.+|++++ | .+||+|++.|.- +.|
T Consensus 83 ~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSAqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGpNG~HVC 162 (590)
T KOG1290|consen 83 QRKLGWGHFSTVWLAWDTQNKRYVALKVVKSAQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGPNGQHVC 162 (590)
T ss_pred EEeccccccceeEEEeeccCCeEEEEEEEehhhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCCCCcEEE
Confidence 35568999999999999 4689999999843 33466788999999983 3 369999999942 789
Q ss_pred EEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCccc
Q 003594 530 IVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILL 599 (808)
Q Consensus 530 lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILl 599 (808)
||+|++ |.+|..+|... ....++...+..|+.||+.||.|||..+ +|||-||||+||||
T Consensus 163 MVfEvL-GdnLLklI~~s--------~YrGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl 221 (590)
T KOG1290|consen 163 MVFEVL-GDNLLKLIKYS--------NYRGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLL 221 (590)
T ss_pred EEehhh-hhHHHHHHHHh--------CCCCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeee
Confidence 999999 78999999653 5677999999999999999999999964 79999999999999
No 404
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.84 E-value=5.4e-21 Score=203.97 Aligned_cols=214 Identities=21% Similarity=0.289 Sum_probs=167.2
Q ss_pred cccccCCceEEEEEEE-----CCeEEEEEEccCCCCHHHHHHHHHHHhcc-CCCCccceeeccc--cceEEEEeecCCCC
Q 003594 468 RLKCAGDWTNVYRGRL-----NHASVAIKTLNNGLSEEDFQAKVSFLTAV-RHPHLVAVMGCCS--ELKCIVFEYMPNGN 539 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~-----~~~~vAiK~l~~~~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~--~~~~lV~Ey~~~gs 539 (808)
..+|.|+|+.||++.+ .++.||+|.+.....+..+.+|+++|..+ .+.||+++.+++. +..++|+||++...
T Consensus 42 ~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~v~ivlp~~~H~~ 121 (418)
T KOG1167|consen 42 NKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSPSRILNELEMLYRLGGSDNIIKLNGCFRNNDQVAIVLPYFEHDR 121 (418)
T ss_pred ccccccchhhhhhhhHhhhccccceEeeeecccccCchHHHHHHHHHHHhccchhhhcchhhhccCCeeEEEecccCccC
Confidence 4557999999999997 24789999999888889999999999999 5899999999984 48999999999999
Q ss_pred HHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCC-CccEEEEeCCCccc---
Q 003594 540 LRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDR-NLVAKISGLGLNIC--- 615 (808)
Q Consensus 540 L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~-~~~~kl~DfGla~~--- 615 (808)
..+++. .++...+..++..++.||.++|. .|||||||||+|+|.+. -+.-.|.|||+|..
T Consensus 122 f~~l~~-------------~l~~~~i~~Yl~~ll~Al~~~h~---~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~ 185 (418)
T KOG1167|consen 122 FRDLYR-------------SLSLAEIRWYLRNLLKALAHLHK---NGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDG 185 (418)
T ss_pred HHHHHh-------------cCCHHHHHHHHHHHHHHhhhhhc---cCccccCCCccccccccccCCceEEechhHHHHHh
Confidence 998883 35678889999999999999999 56999999999999975 47889999999841
Q ss_pred -------------------------------------------------------------------CCCCcchhhHhHH
Q 003594 616 -------------------------------------------------------------------DQLNVRSDIRAFG 628 (808)
Q Consensus 616 -------------------------------------------------------------------~~~t~ksDVwS~G 628 (808)
...++++||||.|
T Consensus 186 ~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDiws~G 265 (418)
T KOG1167|consen 186 YQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDIWSAG 265 (418)
T ss_pred hhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccceeecc
Confidence 1246789999999
Q ss_pred HHHHHHHcCCCCchhhHH--------H------------hhhcH------H---HHHHHhc-----------c------C
Q 003594 629 TLLLHLLTGRNWAGLVEK--------A------------MALDQ------T---TLMQVLD-----------G------N 662 (808)
Q Consensus 629 vil~elltG~~P~~~~~~--------~------------~~~~~------~---~~~~~ld-----------~------~ 662 (808)
||++-+++++.||..... . ..... . ...+... . .
T Consensus 266 VI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q~n~~ 345 (418)
T KOG1167|consen 266 VILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQPNTE 345 (418)
T ss_pred ceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhccccccccee
Confidence 999999999999853110 0 00000 0 0000000 0 0
Q ss_pred CCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 663 AGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 663 ~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
...+....+..+.+|+.+|++.| |..|.|+.+.|+
T Consensus 346 ~~~~~d~~~~~~~dlLdk~le~n--p~kRitAEeALk 380 (418)
T KOG1167|consen 346 REIGSDVFPALLLDLLDKCLELN--PQKRITAEDALK 380 (418)
T ss_pred eccccccccHHHHHHHHHHccCC--hhhcccHHHHhc
Confidence 01122234558899999999999 999999998875
No 405
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.83 E-value=4.7e-21 Score=192.54 Aligned_cols=219 Identities=22% Similarity=0.364 Sum_probs=179.2
Q ss_pred cCCceEEEEEEECCeEEEEEEccC----CCCHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCHHHHHh
Q 003594 472 AGDWTNVYRGRLNHASVAIKTLNN----GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNLRDKLF 545 (808)
Q Consensus 472 ~G~~g~Vy~~~~~~~~vAiK~l~~----~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL~~~l~ 545 (808)
....|..|+|+|.|..+++|+++. .....+|..|.-.|+-+.||||+.++|.|.. ++.++..|||.|||+..|+
T Consensus 200 e~hsgelwrgrwqgndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gslynvlh 279 (448)
T KOG0195|consen 200 ESHSGELWRGRWQGNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSLYNVLH 279 (448)
T ss_pred cCCCcccccccccCcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHHHHHHh
Confidence 445789999999999999999982 2223679999999999999999999999977 6789999999999999997
Q ss_pred hccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEE--eCCCccc--------
Q 003594 546 TSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKIS--GLGLNIC-------- 615 (808)
Q Consensus 546 ~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~--DfGla~~-------- 615 (808)
+. ....++-.++.+++.+|++|++|||+..| -|.--.|....+++|++.+++|+ |--++..
T Consensus 280 e~--------t~vvvd~sqav~faldiargmaflhslep-~ipr~~lns~hvmidedltarismad~kfsfqe~gr~y~p 350 (448)
T KOG0195|consen 280 EQ--------TSVVVDHSQAVRFALDIARGMAFLHSLEP-MIPRFYLNSKHVMIDEDLTARISMADTKFSFQEVGRAYSP 350 (448)
T ss_pred cC--------ccEEEecchHHHHHHHHHhhHHHHhhcch-hhhhhhcccceEEecchhhhheecccceeeeeccccccCc
Confidence 64 45567888999999999999999999763 34445789999999999988874 3222211
Q ss_pred -------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHHHHHHHHHhh
Q 003594 616 -------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAGIALKCL 682 (808)
Q Consensus 616 -------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl 682 (808)
...-..+|+|||.++||||.|..-||..... ....+.-.+.+.+..+|+..+..+..|+.-|+
T Consensus 351 awmspealqrkped~n~raadmwsfaillwel~trevpfadlsp----mecgmkialeglrv~ippgis~hm~klm~icm 426 (448)
T KOG0195|consen 351 AWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSP----MECGMKIALEGLRVHIPPGISRHMNKLMNICM 426 (448)
T ss_pred ccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCc----hhhhhhhhhccccccCCCCccHHHHHHHHHHh
Confidence 1123568999999999999999999975432 12234455677888999999999999999999
Q ss_pred ccCCCcCccccHHhhHHHHHHHH
Q 003594 683 SADQDANRDLRIAGVMKELDEVR 705 (808)
Q Consensus 683 ~~dp~p~~Rps~~evl~~L~~l~ 705 (808)
..| |.+||.+..|+..|++++
T Consensus 427 ned--pgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 427 NED--PGKRPKFDMIVPILEKMI 447 (448)
T ss_pred cCC--CCcCCCcceehhhHHHhc
Confidence 999 999999999999999875
No 406
>cd01989 STK_N The N-terminal domain of Eukaryotic Serine Threonine kinases. The Serine Threonine kinases are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. The N-terminal domain is homologous to the USP family which has a ATP binding fold. The N-terminal domain is predicted to be involved in ATP binding.
Probab=99.82 E-value=1.1e-19 Score=175.54 Aligned_cols=145 Identities=28% Similarity=0.399 Sum_probs=115.2
Q ss_pred eEEEEecCCcccchhhHHHHhhhccCCCcEEEEEEEeccCCcCCcccCCCCCcCCCCCChHHHHHHHHHHHhhHHHHHHH
Q 003594 7 KVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHVTYNISIKDFVYTPFGKLPATSLSDEKLEILKKYEQGKTDNLLSK 86 (808)
Q Consensus 7 ~V~VAVd~s~~ss~~AL~WAl~n~~~~~~~ivLlHV~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 86 (808)
+|+||||+|+.+ .+||+||++.....+..+++|||.++.. ..+...+. ......+....++..+++|.+
T Consensus 1 ~ILVavD~S~~s-~~al~~a~~~a~~~~~~l~ll~v~~~~~---~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~~ 69 (146)
T cd01989 1 SVAVAVDKDKKS-KNALKWALDNLATKGQTIVLVHVHPPIT---SIPSSSGK-------LEVASAYKQEEDKEAKELLLP 69 (146)
T ss_pred CEEEEecCcccc-HHHHHHHHHhccCCCCcEEEEEeccCcc---cCCCCccc-------hHHHHHHHHHHHHHHHHHHHH
Confidence 599999999877 8899999998887788999999987643 11211110 112234455566778899999
Q ss_pred HHhhccCCCceEEEEEcCCccHHHHHHHHHHHhCCcEEEecccccCCCCCCccccC-cccccccccCCCcceEEEEeCC
Q 003594 87 YLGFCGKVKAEILKVEKSDEPVHKLILDLVSRLTITKLVMGLSFMIPSAGKSRTAV-SGSYFVHHHMPDYCELFIICGG 164 (808)
Q Consensus 87 ~~~~C~~~~v~~~~i~~~~~dv~~~I~e~i~~~~i~~LVmGs~~~g~~~~kr~~~~-svs~yv~~~ap~~C~V~vv~kg 164 (808)
+...|...++.+..+...+++|+++|+++++++++|.||||+++++ .+++.++| |++++|++++|++|+|+||++|
T Consensus 70 ~~~~~~~~~~~~~~~~~~g~~~~~~I~~~a~~~~~dlIV~Gs~g~~--~l~~~~~gssva~~Vi~~a~~~c~Vlvv~~~ 146 (146)
T cd01989 70 YRCFCSRKGVQCEDVVLEDDDVAKAIVEYVADHGITKLVMGASSDN--HFSMKFKKSDVASSVLKEAPDFCTVYVVSKG 146 (146)
T ss_pred HHHHHhhcCCeEEEEEEeCCcHHHHHHHHHHHcCCCEEEEeccCCC--ceeecccCCchhHHHHhcCCCCceEEEEeCc
Confidence 9999987777777777666799999999999999999999996544 34667776 6999999999999999999998
No 407
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.82 E-value=8.8e-20 Score=181.38 Aligned_cols=143 Identities=18% Similarity=0.122 Sum_probs=110.5
Q ss_pred CCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--
Q 003594 538 GNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-- 615 (808)
Q Consensus 538 gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-- 615 (808)
|||.+++.. ....++|..++.|+.||+.||.|||+. + ||+|||++.++.+|+ ||++..
T Consensus 1 GsL~~~l~~---------~~~~l~~~~~~~i~~qi~~~L~~lH~~---~------kp~Nil~~~~~~~~~--fG~~~~~~ 60 (176)
T smart00750 1 VSLADILEV---------RGRPLNEEEIWAVCLQCLRALRELHRQ---A------KSGNILLTWDGLLKL--DGSVAFKT 60 (176)
T ss_pred CcHHHHHHH---------hCCCCCHHHHHHHHHHHHHHHHHHHhc---C------CcccEeEcCccceee--ccceEeec
Confidence 789999953 245699999999999999999999993 3 999999999999999 998753
Q ss_pred ------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCC------CCCChhhH
Q 003594 616 ------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNA------GIWPLDLA 671 (808)
Q Consensus 616 ------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~------~~~p~~~~ 671 (808)
..++.++|||||||++|||+||++||...... ...+..++.... ...+....
T Consensus 61 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (176)
T smart00750 61 PEQSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEEREL----SAILEILLNGMPADDPRDRSNLESVS 136 (176)
T ss_pred cccCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchh----cHHHHHHHHHhccCCccccccHHHHH
Confidence 34788999999999999999999998643221 111112221111 11223344
Q ss_pred H--HHHHHHHHhhccCCCcCccccHHhhHHHHHHHHH
Q 003594 672 E--ELAGIALKCLSADQDANRDLRIAGVMKELDEVRK 706 (808)
Q Consensus 672 ~--~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~~ 706 (808)
. .+.+++.+||..+ |..||++.+++..+..+..
T Consensus 137 ~~~~~~~~i~~cl~~~--p~~Rp~~~~ll~~~~~~~~ 171 (176)
T smart00750 137 AARSFADFMRVCASRL--PQRREAANHYLAHCRALFA 171 (176)
T ss_pred hhhhHHHHHHHHHhcc--cccccCHHHHHHHHHHHHH
Confidence 4 6999999999999 9999999999998877653
No 408
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.82 E-value=2.6e-20 Score=188.16 Aligned_cols=134 Identities=16% Similarity=0.171 Sum_probs=106.1
Q ss_pred cccccCCceEEEEEEE-CCeEEEEEEccCCC----C-------HHHH-----------------HHHHHHHhccCCCCcc
Q 003594 468 RLKCAGDWTNVYRGRL-NHASVAIKTLNNGL----S-------EEDF-----------------QAKVSFLTAVRHPHLV 518 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~-~~~~vAiK~l~~~~----~-------~~~~-----------------~~Ei~il~~l~HpnIv 518 (808)
..+|.|+||.||+|.. +|++||||+++... . ...| .+|+.+|.++.++++.
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v~ 82 (190)
T cd05147 3 GCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGIP 82 (190)
T ss_pred CccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 4678999999999998 68999999997321 1 1122 3499999999888775
Q ss_pred ceeeccccceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhh-hhcCCCCeEecCCCCCCc
Q 003594 519 AVMGCCSELKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFL-HSTEPRPIVHGSLTPSSI 597 (808)
Q Consensus 519 ~l~g~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yL-H~~~~~~iiHrDLKp~NI 597 (808)
....+.....+|||||++|++|...+. ....+++.....++.|++.+|.|| |+ .+|+||||||+||
T Consensus 83 ~p~~~~~~~~~iVmE~i~g~~l~~~~~----------~~~~~~~~~~~~i~~qi~~~L~~l~H~---~giiHrDlkP~NI 149 (190)
T cd05147 83 CPEPILLKSHVLVMEFIGDDGWAAPRL----------KDAPLSESKARELYLQVIQIMRILYQD---CRLVHADLSEYNL 149 (190)
T ss_pred CCcEEEecCCEEEEEEeCCCCCcchhh----------hcCCCCHHHHHHHHHHHHHHHHHHHHh---CCcccCCCCHHHE
Confidence 443333334589999999887765542 234688999999999999999999 68 5699999999999
Q ss_pred ccCCCccEEEEeCCCccc
Q 003594 598 LLDRNLVAKISGLGLNIC 615 (808)
Q Consensus 598 Lld~~~~~kl~DfGla~~ 615 (808)
|++ ++.++|+|||+|..
T Consensus 150 li~-~~~v~LiDFG~a~~ 166 (190)
T cd05147 150 LYH-DGKLYIIDVSQSVE 166 (190)
T ss_pred EEE-CCcEEEEEcccccc
Confidence 998 47899999999864
No 409
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.81 E-value=1.5e-19 Score=198.82 Aligned_cols=135 Identities=16% Similarity=0.118 Sum_probs=106.3
Q ss_pred hhccccccccccccCCceEEEEEEE---CCeEEEEEEccCCC-------CHHHHHHHHHHHhccCCCCccceeeccccce
Q 003594 459 ATEDFSERFRLKCAGDWTNVYRGRL---NHASVAIKTLNNGL-------SEEDFQAKVSFLTAVRHPHLVAVMGCCSELK 528 (808)
Q Consensus 459 at~~f~~~~~i~g~G~~g~Vy~~~~---~~~~vAiK~l~~~~-------~~~~~~~Ei~il~~l~HpnIv~l~g~~~~~~ 528 (808)
..++|... ..+|+|+||.||+|.+ ++..||||++.... ....|.+|+.+|.+++|+|++..+..+ +..
T Consensus 16 ~~~~Y~~~-~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~-~~~ 93 (365)
T PRK09188 16 LSARFVET-AVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT-GKD 93 (365)
T ss_pred ccCCceEc-cEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc-CCc
Confidence 33455543 5568999999999987 46778999875221 135689999999999999999533322 467
Q ss_pred EEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCC-CCCCcccCCCccEEE
Q 003594 529 CIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSL-TPSSILLDRNLVAKI 607 (808)
Q Consensus 529 ~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDL-Kp~NILld~~~~~kl 607 (808)
||||||++|++|.. +. ... ...++.+++.||.|||+ .+|+|||| ||+|||++.++.+||
T Consensus 94 ~LVmE~~~G~~L~~-~~----------~~~------~~~~~~~i~~aL~~lH~---~gIiHrDL~KP~NILv~~~~~ikL 153 (365)
T PRK09188 94 GLVRGWTEGVPLHL-AR----------PHG------DPAWFRSAHRALRDLHR---AGITHNDLAKPQNWLMGPDGEAAV 153 (365)
T ss_pred EEEEEccCCCCHHH-hC----------ccc------hHHHHHHHHHHHHHHHH---CCCeeCCCCCcceEEEcCCCCEEE
Confidence 99999999999962 21 111 14678899999999999 66999999 999999999999999
Q ss_pred EeCCCccc
Q 003594 608 SGLGLNIC 615 (808)
Q Consensus 608 ~DfGla~~ 615 (808)
+|||+|+.
T Consensus 154 iDFGlA~~ 161 (365)
T PRK09188 154 IDFQLASV 161 (365)
T ss_pred EECcccee
Confidence 99999975
No 410
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.80 E-value=1.3e-19 Score=186.06 Aligned_cols=153 Identities=16% Similarity=0.191 Sum_probs=122.3
Q ss_pred ccccccccccccCCceEEEEEEECCeEEEEEEccCCCC--HH---H------HHHHHHHHhccCCCCccceeecccc---
Q 003594 461 EDFSERFRLKCAGDWTNVYRGRLNHASVAIKTLNNGLS--EE---D------FQAKVSFLTAVRHPHLVAVMGCCSE--- 526 (808)
Q Consensus 461 ~~f~~~~~i~g~G~~g~Vy~~~~~~~~vAiK~l~~~~~--~~---~------~~~Ei~il~~l~HpnIv~l~g~~~~--- 526 (808)
++-....+++|+|+||.||....++..+|||++++... .. . +.+|+..+.++.||+|..+..++..
T Consensus 30 ~~~y~~~~~l~~~~f~~v~l~~~~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~~~ 109 (232)
T PRK10359 30 SYNIKTIKVFRNIDDTKVSLIDTDYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLAER 109 (232)
T ss_pred hCceEEEEEecCCCceEEEEEecCCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeeccc
Confidence 33344457778999999999877788999999983321 11 1 5789999999999999999887532
Q ss_pred -------ceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCccc
Q 003594 527 -------LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILL 599 (808)
Q Consensus 527 -------~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILl 599 (808)
..+|||||++|.+|.++.. ++. ....+++.+|..||. .+++|||+||+||++
T Consensus 110 ~~~~~~~~~~lvmEyi~G~tL~~~~~--------------~~~----~~~~~i~~~l~~lH~---~gi~H~Dikp~Nili 168 (232)
T PRK10359 110 KTLRYAHTYIMLIEYIEGVELNDMPE--------------ISE----DVKAKIKASIESLHQ---HGMVSGDPHKGNFIV 168 (232)
T ss_pred ccccccCCeEEEEEEECCccHHHhhh--------------ccH----HHHHHHHHHHHHHHH---cCCccCCCChHHEEE
Confidence 4789999999999988741 222 246699999999999 569999999999999
Q ss_pred CCCccEEEEeCCCccc-------------CCCCcchhhHhHHHHHHHHH
Q 003594 600 DRNLVAKISGLGLNIC-------------DQLNVRSDIRAFGTLLLHLL 635 (808)
Q Consensus 600 d~~~~~kl~DfGla~~-------------~~~t~ksDVwS~Gvil~ell 635 (808)
+.+| ++|+|||.... ..++.++|+||||+++..+.
T Consensus 169 ~~~g-i~liDfg~~~~~~e~~a~d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 169 SKNG-LRIIDLSGKRCTAQRKAKDRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred eCCC-EEEEECCCcccccchhhHHHHHHHhHhcccccccceeEeehHHH
Confidence 9988 99999998754 24567999999999987654
No 411
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.80 E-value=3.4e-19 Score=180.24 Aligned_cols=134 Identities=15% Similarity=0.138 Sum_probs=107.4
Q ss_pred cccccCCceEEEEEEE-CCeEEEEEEccCCCC----------------------------HHHHHHHHHHHhccCCCCcc
Q 003594 468 RLKCAGDWTNVYRGRL-NHASVAIKTLNNGLS----------------------------EEDFQAKVSFLTAVRHPHLV 518 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~-~~~~vAiK~l~~~~~----------------------------~~~~~~Ei~il~~l~HpnIv 518 (808)
..+|.|+||.||+|.+ +|+.||||+++.... ...+.+|...+.++.|+++.
T Consensus 3 ~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 82 (190)
T cd05145 3 GCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGVP 82 (190)
T ss_pred ceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 4678999999999998 699999999883311 11235789999999999886
Q ss_pred ceeeccccceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhh-cCCCCeEecCCCCCCc
Q 003594 519 AVMGCCSELKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHS-TEPRPIVHGSLTPSSI 597 (808)
Q Consensus 519 ~l~g~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~-~~~~~iiHrDLKp~NI 597 (808)
....+.....+|||||++|+++..... ....++......|+.+++.+|.+||+ .+ |+||||||+||
T Consensus 83 ~p~~~~~~~~~lVmE~~~g~~~~~~~l----------~~~~~~~~~~~~i~~~l~~~l~~lH~~~g---ivHrDlkP~NI 149 (190)
T cd05145 83 VPEPILLKKNVLVMEFIGDDGSPAPRL----------KDVPLEEEEAEELYEQVVEQMRRLYQEAG---LVHGDLSEYNI 149 (190)
T ss_pred CceEEEecCCEEEEEEecCCCchhhhh----------hhccCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCChhhE
Confidence 554444445689999999886544321 22457788899999999999999999 55 99999999999
Q ss_pred ccCCCccEEEEeCCCccc
Q 003594 598 LLDRNLVAKISGLGLNIC 615 (808)
Q Consensus 598 Lld~~~~~kl~DfGla~~ 615 (808)
|++ ++.++|+|||++..
T Consensus 150 ll~-~~~~~liDFG~a~~ 166 (190)
T cd05145 150 LYH-DGKPYIIDVSQAVE 166 (190)
T ss_pred EEE-CCCEEEEEccccee
Confidence 998 88999999999865
No 412
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.78 E-value=1.4e-18 Score=172.63 Aligned_cols=223 Identities=13% Similarity=0.167 Sum_probs=169.6
Q ss_pred ccccccCCceEEEEEEE--CCeEEEEEEccCCCCHHHHHHHHHHHhccCC-CCccceeecccc--ceEEEEeecCCCCHH
Q 003594 467 FRLKCAGDWTNVYRGRL--NHASVAIKTLNNGLSEEDFQAKVSFLTAVRH-PHLVAVMGCCSE--LKCIVFEYMPNGNLR 541 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~~~~~~~~Ei~il~~l~H-pnIv~l~g~~~~--~~~lV~Ey~~~gsL~ 541 (808)
.+-+|.|+||.+|.|.. +|..||||+-.......++..|..+...|+| ..|..+..+..+ .-.|||+.+ |.||+
T Consensus 20 vrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMdLL-GPsLE 98 (341)
T KOG1163|consen 20 VRKIGSGSFGDIYLGISITSGEEVAIKLESSKAKHPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMDLL-GPSLE 98 (341)
T ss_pred EEeecCCchhheeeeeeccCCceEEEEeecccCCCcchhHHHHHHHHhccCCCCchhhhhccccccceeeeecc-CccHH
Confidence 34567999999999997 7899999998877777889999999999975 455555555544 678999999 78999
Q ss_pred HHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCC---CccEEEEeCCCccc---
Q 003594 542 DKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDR---NLVAKISGLGLNIC--- 615 (808)
Q Consensus 542 ~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~---~~~~kl~DfGla~~--- 615 (808)
+++.- -...++..+.+.++-|++.-++|+|. +++|||||||+|+|..- ...+.++|||+|+.
T Consensus 99 dLfnf---------C~R~ftmkTvLMLaDQml~RiEyvH~---r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d 166 (341)
T KOG1163|consen 99 DLFNF---------CSRRFTMKTVLMLADQMLSRIEYVHL---RNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRD 166 (341)
T ss_pred HHHHH---------HhhhhhHHhHHHHHHHHHHHHHHHHh---hccccccCCccceeeccccccceEEEEeccchhhhcc
Confidence 98852 24568889999999999999999999 66999999999999963 35789999999964
Q ss_pred -----------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCC--
Q 003594 616 -----------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAG-- 664 (808)
Q Consensus 616 -----------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~-- 664 (808)
...+.+.|+-|+|.+|..+..|..||...... ........+......
T Consensus 167 ~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~--tk~QKyEkI~EkK~s~~ 244 (341)
T KOG1163|consen 167 IRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAA--TKKQKYEKISEKKMSTP 244 (341)
T ss_pred ccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchh--hHHHHHHHHHHhhcCCC
Confidence 12356789999999999999999998754332 222223333332211
Q ss_pred --CCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHHHH
Q 003594 665 --IWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVRK 706 (808)
Q Consensus 665 --~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~~ 706 (808)
......|.++...+.-|-... -.+-|...-+.+.+.-|..
T Consensus 245 ie~LC~G~P~EF~myl~Y~R~L~--F~E~Pdy~ylrqlFriLfr 286 (341)
T KOG1163|consen 245 IEVLCKGFPAEFAMYLNYCRGLG--FEEKPDYMYLRQLFRILFR 286 (341)
T ss_pred HHHHhCCCcHHHHHHHHHHhhcC--CCCCCcHHHHHHHHHHHHh
Confidence 122356789999999998887 6777875555555554443
No 413
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.77 E-value=8.7e-18 Score=184.24 Aligned_cols=225 Identities=16% Similarity=0.118 Sum_probs=166.9
Q ss_pred ccccccCCceEEEEEEECC---eEEEEEEccCC--CCHHHHHHHHHHHhccCC----CCccceeeccc-c--ceEEEEee
Q 003594 467 FRLKCAGDWTNVYRGRLNH---ASVAIKTLNNG--LSEEDFQAKVSFLTAVRH----PHLVAVMGCCS-E--LKCIVFEY 534 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~~~---~~vAiK~l~~~--~~~~~~~~Ei~il~~l~H----pnIv~l~g~~~-~--~~~lV~Ey 534 (808)
.+.+|+|+||.||.|.... ..+|+|..... .....+..|+.++..+.. +++..+++... . ..|+||+.
T Consensus 23 ~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~iVM~l 102 (322)
T KOG1164|consen 23 GKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFIVMSL 102 (322)
T ss_pred eeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEEEEec
Confidence 3556789999999999843 47999988732 222378889999999873 58888888773 3 67999999
Q ss_pred cCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCC-----ccEEEEe
Q 003594 535 MPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRN-----LVAKISG 609 (808)
Q Consensus 535 ~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~-----~~~kl~D 609 (808)
+ |.+|.++.... ....++-.+.++|+.|++.+|.+||+ .|++||||||+|+++... ..++|.|
T Consensus 103 ~-G~sL~dl~~~~--------~~~~fs~~T~l~ia~q~l~~l~~lH~---~G~iHRDiKp~N~~~g~~~~~~~~~~~llD 170 (322)
T KOG1164|consen 103 L-GPSLEDLRKRN--------PPGRFSRKTVLRIAIQNLNALEDLHS---KGFIHRDIKPENFVVGQSSRSEVRTLYLLD 170 (322)
T ss_pred c-CccHHHHHHhC--------CCCCcCHhHHHHHHHHHHHHHHHHHh---cCcccCCcCHHHeeecCCCCcccceEEEEe
Confidence 9 79999987543 25679999999999999999999999 669999999999999754 4799999
Q ss_pred CCCcc--c---------------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHH
Q 003594 610 LGLNI--C---------------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTT 654 (808)
Q Consensus 610 fGla~--~---------------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~ 654 (808)
||+++ . ...+.+.|+||++.++.+++.|..||...... .....
T Consensus 171 fGlar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~--~~~~~ 248 (322)
T KOG1164|consen 171 FGLARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMT--DLKSK 248 (322)
T ss_pred cCCCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCcccccc--chHHH
Confidence 99997 1 12457889999999999999998887543221 01111
Q ss_pred HHHHhccCCCC-CChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHHHHh
Q 003594 655 LMQVLDGNAGI-WPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVRKK 707 (808)
Q Consensus 655 ~~~~ld~~~~~-~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~~~ 707 (808)
+.......... .....+..+..+...+-..+ ...+|....+...|..+...
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~Pdy~~~~~~l~~~~~~ 300 (322)
T KOG1164|consen 249 FEKDPRKLLTDRFGDLKPEEFAKILEYIDSLD--YEDKPDYEKLAELLKDVFDS 300 (322)
T ss_pred HHHHhhhhccccccCCChHHHHHHHHHhhccC--CcCCCCHHHHHHHHHHHHHh
Confidence 11111111111 23345567777777776667 78899999998888776544
No 414
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.76 E-value=5.1e-18 Score=170.80 Aligned_cols=152 Identities=12% Similarity=0.082 Sum_probs=121.7
Q ss_pred cccccCCceEEEEEEECCeEEEEEEccCCCC-H-----HHHHHHHHHHhccC-CCCccceeeccccceEEEEeecCCCCH
Q 003594 468 RLKCAGDWTNVYRGRLNHASVAIKTLNNGLS-E-----EDFQAKVSFLTAVR-HPHLVAVMGCCSELKCIVFEYMPNGNL 540 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~~~~~vAiK~l~~~~~-~-----~~~~~Ei~il~~l~-HpnIv~l~g~~~~~~~lV~Ey~~~gsL 540 (808)
..+++|+||+||.+...+.+++.+.+..... . ..|.+|+++|.+|. |+++++++++ +..+++|+|+.|.+|
T Consensus 8 ~~l~~~~f~~v~~~~~~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~--~~~~lvmeyI~G~~L 85 (218)
T PRK12274 8 EPLKSDTFGRILLVRGGERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW--DGRHLDRSYLAGAAM 85 (218)
T ss_pred eeecCCCcceEEEeecCCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE--cCEEEEEeeecCccH
Confidence 4567899999998888889999888873222 1 25789999999995 5889999886 457999999999998
Q ss_pred HHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCC-CCCCcccCCCccEEEEeCCCcccC---
Q 003594 541 RDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSL-TPSSILLDRNLVAKISGLGLNICD--- 616 (808)
Q Consensus 541 ~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDL-Kp~NILld~~~~~kl~DfGla~~~--- 616 (808)
...+. . . ...++.|++.+|.++|. .||+|||| ||+|||++.++.++|+|||++...
T Consensus 86 ~~~~~----------~-~------~~~~~~qi~~~L~~lH~---~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~ 145 (218)
T PRK12274 86 YQRPP----------R-G------DLAYFRAARRLLQQLHR---CGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPR 145 (218)
T ss_pred Hhhhh----------h-h------hHHHHHHHHHHHHHHHH---CcCccCCCCCcceEEEcCCCCEEEEECCCceecCCc
Confidence 75441 1 1 13478899999999999 56999999 799999999999999999998630
Q ss_pred ------------------------------------CCC-cchhhHhHHHHHHHHHcCCCCc
Q 003594 617 ------------------------------------QLN-VRSDIRAFGTLLLHLLTGRNWA 641 (808)
Q Consensus 617 ------------------------------------~~t-~ksDVwS~Gvil~elltG~~P~ 641 (808)
..+ ...+.++.|.-+|.++||+.|+
T Consensus 146 ~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~ 207 (218)
T PRK12274 146 ARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLH 207 (218)
T ss_pred chHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCc
Confidence 011 4468889999999999988764
No 415
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.73 E-value=3.8e-17 Score=169.21 Aligned_cols=224 Identities=16% Similarity=0.185 Sum_probs=170.1
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEccCCCCHHHHHHHHHHHhcc-CCCCccceeecccc--ceEEEEeecCCCCHHH
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLNNGLSEEDFQAKVSFLTAV-RHPHLVAVMGCCSE--LKCIVFEYMPNGNLRD 542 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~~~~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL~~ 542 (808)
+.||.|+||.++.|.. ++.+||||.-.......++..|....+.| ..++|...|.+-++ +-.||+|.+ |.||+|
T Consensus 34 kKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidLL-GPSLED 112 (449)
T KOG1165|consen 34 KKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDLL-GPSLED 112 (449)
T ss_pred cccccCcceeeecccccccCceEEEEeccccCCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhhh-CcCHHH
Confidence 4557899999999996 89999999877555567888898888888 46888888766655 667999999 789999
Q ss_pred HHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCC-----ccEEEEeCCCccc--
Q 003594 543 KLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRN-----LVAKISGLGLNIC-- 615 (808)
Q Consensus 543 ~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~-----~~~kl~DfGla~~-- 615 (808)
++. --...++..+...|+.|++.-++|+|+ +.+|.|||||+|+||..- ..+.|+|||+|+.
T Consensus 113 LFD---------~CgR~FSvKTV~miA~Qmi~rie~vH~---k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~Yr 180 (449)
T KOG1165|consen 113 LFD---------LCGRRFSVKTVAMIAKQMITRIEYVHE---KDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYR 180 (449)
T ss_pred HHH---------HhcCcccHHhHHHHHHHHHHHHHHHHh---cceeecccCccceeecCCCCCCCceEEEEeccchhhhc
Confidence 884 235679999999999999999999999 669999999999999643 5799999999964
Q ss_pred ------------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCC
Q 003594 616 ------------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGI 665 (808)
Q Consensus 616 ------------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~ 665 (808)
.+.+.+.|+=|||-+++..|-|..||...... .....+..|-+.....
T Consensus 181 Dp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~--tnK~kYeKIGe~Kr~T 258 (449)
T KOG1165|consen 181 DPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAD--TNKEKYEKIGETKRST 258 (449)
T ss_pred CccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCc--chHHHHHHhccccccC
Confidence 12467889999999999999999998654322 2334444444432211
Q ss_pred ----CChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHHHHhc
Q 003594 666 ----WPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVRKKA 708 (808)
Q Consensus 666 ----~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~~~~ 708 (808)
.....+.++...+.-.-..+ -.+-|...-+...+..+.+..
T Consensus 259 ~i~~Lc~g~P~efa~Yl~yvR~L~--F~E~PDYdylr~Lf~dvldr~ 303 (449)
T KOG1165|consen 259 PIEVLCEGFPEEFATYLRYVRRLD--FFETPDYDYLRKLFDDVLDRL 303 (449)
T ss_pred CHHHHHhcCHHHHHHHHHHHHhcC--cccCCCHHHHHHHHHHHHHhc
Confidence 22346777777776665555 557787666666666665443
No 416
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.73 E-value=4.6e-17 Score=167.01 Aligned_cols=130 Identities=22% Similarity=0.259 Sum_probs=109.0
Q ss_pred cccccCCceEEEEEEECCeEEEEEEccCCCC----------HHHHHHHHHHHhccCCCCccceeecc--ccceEEEEeec
Q 003594 468 RLKCAGDWTNVYRGRLNHASVAIKTLNNGLS----------EEDFQAKVSFLTAVRHPHLVAVMGCC--SELKCIVFEYM 535 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~~~~~vAiK~l~~~~~----------~~~~~~Ei~il~~l~HpnIv~l~g~~--~~~~~lV~Ey~ 535 (808)
+.+|+|++|.||+|.++|..|++|+...... ...+.+|+.++..++|+||.....++ .+..++||||+
T Consensus 2 ~~l~~G~~~~vy~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 81 (211)
T PRK14879 2 KLIKRGAEAEIYLGDFLGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEYI 81 (211)
T ss_pred cccccCceEEEEEEeeCCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEEe
Confidence 4578999999999999999999998663211 13578899999999999987666554 45789999999
Q ss_pred CCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc
Q 003594 536 PNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC 615 (808)
Q Consensus 536 ~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~ 615 (808)
+|++|.+++... .+ .+..++.+++.+|.+||+ .+++|||++|.|||++ ++.++|+|||++..
T Consensus 82 ~G~~L~~~~~~~-------------~~-~~~~i~~~i~~~l~~lH~---~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 82 EGEPLKDLINSN-------------GM-EELELSREIGRLVGKLHS---AGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred CCcCHHHHHHhc-------------cH-HHHHHHHHHHHHHHHHHh---CCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 999999998422 12 788999999999999999 5699999999999999 78999999999865
No 417
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.73 E-value=1.3e-16 Score=170.55 Aligned_cols=218 Identities=25% Similarity=0.362 Sum_probs=165.8
Q ss_pred cccccCCceEEEEEEECCeEEEEEEccCC---C--CHHHHHHHHHHHhccCCC-Cccceeecccc--ceEEEEeecCCCC
Q 003594 468 RLKCAGDWTNVYRGRLNHASVAIKTLNNG---L--SEEDFQAKVSFLTAVRHP-HLVAVMGCCSE--LKCIVFEYMPNGN 539 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~~~~~vAiK~l~~~---~--~~~~~~~Ei~il~~l~Hp-nIv~l~g~~~~--~~~lV~Ey~~~gs 539 (808)
..+|.|+||.||++.+. ..+++|.+... . ....|.+|+.++..+.|+ +|+++++++.. ..+++++|+.+++
T Consensus 6 ~~l~~g~~~~v~~~~~~-~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 84 (384)
T COG0515 6 RKLGEGSFGEVYLARDR-KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEYVDGGS 84 (384)
T ss_pred EeecCCCCeEEEEEEec-cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEecCCCCc
Confidence 34568999999999988 88999998822 1 356799999999999988 79999999855 3599999999999
Q ss_pred HHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCc-cEEEEeCCCccc---
Q 003594 540 LRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNL-VAKISGLGLNIC--- 615 (808)
Q Consensus 540 L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~-~~kl~DfGla~~--- 615 (808)
|.+++.... ....++......++.|++.+|.|+|. .+++|||+||+||+++..+ .++++|||++..
T Consensus 85 l~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~l~~~H~---~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~ 154 (384)
T COG0515 85 LEDLLKKIG-------RKGPLSESEALFILAQILSALEYLHS---KGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPD 154 (384)
T ss_pred HHHHHHhcc-------cccCCCHHHHHHHHHHHHHHHHHHHh---CCeeccCCCHHHeeecCCCCeEEEeccCcceecCC
Confidence 997774221 00378999999999999999999999 5599999999999999988 799999997641
Q ss_pred ---------------------------C----CCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhcc-C-
Q 003594 616 ---------------------------D----QLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDG-N- 662 (808)
Q Consensus 616 ---------------------------~----~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~-~- 662 (808)
. .++...|+||+|++++++++|..||...... .........+.. .
T Consensus 155 ~~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~--~~~~~~~~~~~~~~~ 232 (384)
T COG0515 155 PGSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNS--SATSQTLKIILELPT 232 (384)
T ss_pred CCccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCcc--ccHHHHHHHHHhcCC
Confidence 1 3567899999999999999999997543210 001111121111 1
Q ss_pred ---CCCCChh----hHHHHHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 663 ---AGIWPLD----LAEELAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 663 ---~~~~p~~----~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
....... ....+.+++..|+..+ |..|.+.......
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~r~~~~~~~~~ 275 (384)
T COG0515 233 PSLASPLSPSNPELISKAASDLLKKLLAKD--PKNRLSSSSDLSH 275 (384)
T ss_pred cccccccCccccchhhHHHHHHHHHHHhcC--chhcCCHHHHhhc
Confidence 1111111 1368899999999998 8899887766654
No 418
>PRK10345 hypothetical protein; Provisional
Probab=99.72 E-value=2e-17 Score=169.05 Aligned_cols=130 Identities=12% Similarity=0.150 Sum_probs=100.5
Q ss_pred ccccccCCceEEEEEEECCeEEEEEEccC--CCCHHHHHHHHHHHhcc-----CCCCccceeeccccc-----eE-EEEe
Q 003594 467 FRLKCAGDWTNVYRGRLNHASVAIKTLNN--GLSEEDFQAKVSFLTAV-----RHPHLVAVMGCCSEL-----KC-IVFE 533 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~~~~~vAiK~l~~--~~~~~~~~~Ei~il~~l-----~HpnIv~l~g~~~~~-----~~-lV~E 533 (808)
..++|+|+||.||....++.. +||++.. ....+.+.+|+.++..+ .||||++++|++.+. .+ +|+|
T Consensus 7 ~~~LG~G~~~~Vy~hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I~e 85 (210)
T PRK10345 7 QSPLGTGRHRKCYAHPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVIAD 85 (210)
T ss_pred cceecCCCceEEEECCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEEec
Confidence 357899999999962223444 6998873 22456799999999999 579999999999663 23 7899
Q ss_pred e--cCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHh-hhhhhcCCCCeEecCCCCCCcccCC----CccEE
Q 003594 534 Y--MPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGL-SFLHSTEPRPIVHGSLTPSSILLDR----NLVAK 606 (808)
Q Consensus 534 y--~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL-~yLH~~~~~~iiHrDLKp~NILld~----~~~~k 606 (808)
| +++|+|.+++.. ..+++. ..++.+++.++ .|||+ .+|+||||||+|||++. ++.++
T Consensus 86 ~~G~~~~tL~~~l~~-----------~~~~e~--~~~~~~~L~~l~~yLh~---~~IvhrDlKp~NILl~~~~~~~~~~~ 149 (210)
T PRK10345 86 FDGKPSITLTEFAEQ-----------CRYEED--VAQLRQLLKKLKRYLLD---NRIVTMELKPQNILCQRISESEVIPV 149 (210)
T ss_pred CCCCcchhHHHHHHc-----------ccccHh--HHHHHHHHHHHHHHHHH---CCEeecCCCHHHEEEeccCCCCCcEE
Confidence 9 667999999942 235555 35688888888 99999 55999999999999974 34899
Q ss_pred EEeCCCc
Q 003594 607 ISGLGLN 613 (808)
Q Consensus 607 l~DfGla 613 (808)
|+||+.+
T Consensus 150 LiDg~G~ 156 (210)
T PRK10345 150 VCDNIGE 156 (210)
T ss_pred EEECCCC
Confidence 9995544
No 419
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.70 E-value=4.7e-17 Score=182.33 Aligned_cols=185 Identities=24% Similarity=0.393 Sum_probs=147.1
Q ss_pred HhccCCCCccceeecccc--ceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCC
Q 003594 509 LTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRP 586 (808)
Q Consensus 509 l~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~ 586 (808)
|+.+.|.|+.+++|.+.+ ..++|.+||.-|+|.|.+.. ....++|.-...++.+|+.||.|||+.. ..
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~---------~~~~~d~~F~~s~~rdi~~Gl~ylh~s~-i~ 70 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN---------EDIKLDYFFILSFIRDISKGLAYLHNSP-IG 70 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc---------cccCccHHHHHHHHHHHHHHHHHHhcCc-ce
Confidence 467899999999999976 67899999999999999963 4567999999999999999999999953 22
Q ss_pred eEecCCCCCCcccCCCccEEEEeCCCcccC----------------------------------CCCcchhhHhHHHHHH
Q 003594 587 IVHGSLTPSSILLDRNLVAKISGLGLNICD----------------------------------QLNVRSDIRAFGTLLL 632 (808)
Q Consensus 587 iiHrDLKp~NILld~~~~~kl~DfGla~~~----------------------------------~~t~ksDVwS~Gvil~ 632 (808)
.|+.|++.|+++|..+.+||+|||+.... ..+.+.||||||++++
T Consensus 71 -~hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ 149 (484)
T KOG1023|consen 71 -YHGALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMY 149 (484)
T ss_pred -eeeeeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHH
Confidence 99999999999999999999999986320 1467899999999999
Q ss_pred HHHcCCCCchhhHHHhhhcHHHHHHHhc-cCCCCCC----h-hhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHHHH
Q 003594 633 HLLTGRNWAGLVEKAMALDQTTLMQVLD-GNAGIWP----L-DLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVRK 706 (808)
Q Consensus 633 elltG~~P~~~~~~~~~~~~~~~~~~ld-~~~~~~p----~-~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~~ 706 (808)
|+++...||......... .+....+.+ +..+..| . ...+.+..++..||..+ |..||++.+|-..++.+..
T Consensus 150 ei~~r~~~~~~~~~~~~~-~eii~~~~~~~~~~~rP~i~~~~e~~~~l~~l~~~cw~e~--P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 150 EILFRSGPFDLRNLVEDP-DEIILRVKKGGSNPFRPSIELLNELPPELLLLVARCWEEI--PEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred HHHhccCccccccccCCh-HHHHHHHHhcCCCCcCcchhhhhhcchHHHHHHHHhcccC--hhhCccHHHHHhhhhhhcc
Confidence 999999999864332111 222233333 2222222 1 34557999999999999 9999999999988887765
Q ss_pred h
Q 003594 707 K 707 (808)
Q Consensus 707 ~ 707 (808)
.
T Consensus 227 ~ 227 (484)
T KOG1023|consen 227 G 227 (484)
T ss_pred c
Confidence 4
No 420
>PF04564 U-box: U-box domain; InterPro: IPR003613 Quality control of intracellular proteins is essential for cellular homeostasis. Molecular chaperones recognise and contribute to the refolding of misfolded or unfolded proteins, whereas the ubiquitin-proteasome system mediates the degradation of such abnormal proteins. Ubiquitin-protein ligases (E3s) determine the substrate specificity for ubiquitylation and have been classified into HECT and RING-finger families. More recently, however, U-box proteins, which contain a domain (the U box) of about 70 amino acids that is conserved from yeast to humans, have been identified as a new type of E3 []. Members of the U-box family of proteins constitute a class of ubiquitin-protein ligases (E3s) distinct from the HECT-type and RING finger-containing E3 families []. Using yeast two-hybrid technology, all mammalian U-box proteins have been reported to interact with molecular chaperones or co-chaperones, including Hsp90, Hsp70, DnaJc7, EKN1, CRN, and VCP. This suggests that the function of U box-type E3s is to mediate the degradation of unfolded or misfolded proteins in conjunction with molecular chaperones as receptors that recognise such abnormal proteins [, ]. Unlike the RING finger domain, IPR001841 from INTERPRO, that is stabilised by Zn2+ ions coordinated by the cysteines and a histidine, the U-box scaffold is probably stabilised by a system of salt-bridges and hydrogen bonds. The charged and polar residues that participate in this network of bonds are more strongly conserved in the U-box proteins than in classic RING fingers, which supports their role in maintaining the stability of the U box. Thus, the U box appears to have evolved from a RING finger domain by appropriation of a new set of residues required to stabilise its structure, concomitant with the loss of the original, metal-chelating residues [].; GO: 0004842 ubiquitin-protein ligase activity, 0016567 protein ubiquitination, 0000151 ubiquitin ligase complex; PDB: 1T1H_A 2C2L_D 2C2V_V 1WGM_A 2KR4_A 3L1Z_B 3L1X_A 2KRE_A 3M63_A 2QIZ_A ....
Probab=99.70 E-value=1.1e-17 Score=141.23 Aligned_cols=73 Identities=37% Similarity=0.747 Sum_probs=64.7
Q ss_pred CCccccccccccccCCCcccCCCcchhhHHHHHHHcCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHhcCC
Q 003594 733 VPSVFICPIFQEVMKTPHVAADGFSYELEAMEEWLGMGHDTSPMTNLRLKHKYLTPNHTLRSLIQEWHNKQSS 805 (808)
Q Consensus 733 ~Ps~f~cPI~~evm~dP~v~~dg~tye~~ai~~wl~~~~~tsP~t~~~l~~~~l~pN~~l~~~i~~~~~~~~~ 805 (808)
+|.+|.|||+.++|.||+++++|+|||+.+|+.|+..++.+||.|++++....|+||++||++|++|+.+|.|
T Consensus 1 iP~~f~CpIt~~lM~dPVi~~~G~tyer~~I~~~l~~~~~~~P~t~~~l~~~~l~pn~~Lk~~I~~~~~~~~~ 73 (73)
T PF04564_consen 1 IPDEFLCPITGELMRDPVILPSGHTYERSAIERWLEQNGGTDPFTRQPLSESDLIPNRALKSAIEEWCAENKK 73 (73)
T ss_dssp SSGGGB-TTTSSB-SSEEEETTSEEEEHHHHHHHHCTTSSB-TTT-SB-SGGGSEE-HHHHHHHHHHHHHCTC
T ss_pred CCcccCCcCcCcHhhCceeCCcCCEEcHHHHHHHHHcCCCCCCCCCCcCCcccceECHHHHHHHHHHHHHccC
Confidence 5899999999999999999999999999999999998889999999999999999999999999999999875
No 421
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.70 E-value=9.7e-17 Score=163.13 Aligned_cols=126 Identities=24% Similarity=0.294 Sum_probs=103.8
Q ss_pred ccccCCceEEEEEEECCeEEEEEEccCCC---C-------HHHHHHHHHHHhccCCCCcc--ceeeccccceEEEEeecC
Q 003594 469 LKCAGDWTNVYRGRLNHASVAIKTLNNGL---S-------EEDFQAKVSFLTAVRHPHLV--AVMGCCSELKCIVFEYMP 536 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~~~~~vAiK~l~~~~---~-------~~~~~~Ei~il~~l~HpnIv--~l~g~~~~~~~lV~Ey~~ 536 (808)
++|+|+||.||+|.++|..|++|+..... . ...+.+|+.++..++|+++. .+++...+..++||||++
T Consensus 1 ~ig~G~~~~vy~~~~~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~~ 80 (199)
T TIGR03724 1 LIAKGAEAIIYLGDFLGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYIE 80 (199)
T ss_pred CCCCCceEEEEEeecCCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEEC
Confidence 46899999999999999999999965211 1 24577899999999887654 444444557799999999
Q ss_pred CCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc
Q 003594 537 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC 615 (808)
Q Consensus 537 ~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~ 615 (808)
|++|.+.+... .. .++.+++.+|.+||+ .+++|||++|.||+++ ++.++++|||++..
T Consensus 81 g~~l~~~~~~~----------~~-------~~~~~i~~~l~~lH~---~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 81 GKPLKDVIEEG----------ND-------ELLREIGRLVGKLHK---AGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CccHHHHHhhc----------HH-------HHHHHHHHHHHHHHH---CCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 99999988422 11 789999999999999 6699999999999999 88999999999875
No 422
>smart00090 RIO RIO-like kinase.
Probab=99.67 E-value=1.3e-16 Score=166.82 Aligned_cols=136 Identities=15% Similarity=0.149 Sum_probs=106.1
Q ss_pred cccccccccCCceEEEEEE-E--CCeEEEEEEccCCCC--------------------------HHHHHHHHHHHhccCC
Q 003594 464 SERFRLKCAGDWTNVYRGR-L--NHASVAIKTLNNGLS--------------------------EEDFQAKVSFLTAVRH 514 (808)
Q Consensus 464 ~~~~~i~g~G~~g~Vy~~~-~--~~~~vAiK~l~~~~~--------------------------~~~~~~Ei~il~~l~H 514 (808)
+.....+|.|+||.||+|. . +|+.||||+++.... ...+.+|+.++.++.+
T Consensus 30 ~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~~ 109 (237)
T smart00090 30 SAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLYE 109 (237)
T ss_pred HHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 3444667899999999998 3 789999999873210 0235689999999976
Q ss_pred CC--ccceeeccccceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCC-eEecC
Q 003594 515 PH--LVAVMGCCSELKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRP-IVHGS 591 (808)
Q Consensus 515 pn--Iv~l~g~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~-iiHrD 591 (808)
.+ +.+++++ ...+|||||++|++|...+. ....+.......|+.||+.+|.|||. .+ |+|||
T Consensus 110 ~~i~~p~~~~~--~~~~lV~E~~~g~~L~~~~~----------~~~~~~~~~~~~i~~qi~~~l~~LH~---~g~iiH~D 174 (237)
T smart00090 110 AGVPVPKPIAW--RRNVLVMEFIGGDGLPAPRL----------KDVEPEEEEEFELYDDILEEMRKLYK---EGELVHGD 174 (237)
T ss_pred cCCCCCeeeEe--cCceEEEEEecCCccccccc----------ccCCcchHHHHHHHHHHHHHHHHHHh---cCCEEeCC
Confidence 33 4445543 34589999999988876552 22345566678999999999999999 67 99999
Q ss_pred CCCCCcccCCCccEEEEeCCCccc
Q 003594 592 LTPSSILLDRNLVAKISGLGLNIC 615 (808)
Q Consensus 592 LKp~NILld~~~~~kl~DfGla~~ 615 (808)
|||+||+++ ++.++|+|||.+..
T Consensus 175 ikp~NIli~-~~~i~LiDFg~a~~ 197 (237)
T smart00090 175 LSEYNILVH-DGKVVIIDVSQSVE 197 (237)
T ss_pred CChhhEEEE-CCCEEEEEChhhhc
Confidence 999999999 88999999999864
No 423
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.67 E-value=1.8e-17 Score=193.91 Aligned_cols=216 Identities=19% Similarity=0.236 Sum_probs=156.9
Q ss_pred cccccccCCceEEEEEEE--CCeEEEEEEcc----CCCCHH----HHHHHHHHHhccCCCCccceeecccc--ceEEEEe
Q 003594 466 RFRLKCAGDWTNVYRGRL--NHASVAIKTLN----NGLSEE----DFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFE 533 (808)
Q Consensus 466 ~~~i~g~G~~g~Vy~~~~--~~~~vAiK~l~----~~~~~~----~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~E 533 (808)
...+.|.|+||.|+.... ....++.|... ...... .+..|+-+-..+.|||++..+..+.+ ..+-+||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 446778999997777765 33334444332 222222 25567888888999999888777755 3334499
Q ss_pred ecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCc
Q 003594 534 YMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 613 (808)
Q Consensus 534 y~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla 613 (808)
||++ +|..++. ....+....+..++.|++.|+.|||+ .||.||||||+|+|++.+|.+||+|||.+
T Consensus 402 ~~~~-Dlf~~~~----------~~~~~~~~e~~c~fKqL~~Gv~y~h~---~GiahrdlK~enll~~~~g~lki~Dfg~~ 467 (601)
T KOG0590|consen 402 YCPY-DLFSLVM----------SNGKLTPLEADCFFKQLLRGVKYLHS---MGLAHRDLKLENLLVTENGILKIIDFGAA 467 (601)
T ss_pred cccH-HHHHHHh----------cccccchhhhhHHHHHHHHHHHHHHh---cCceeccCccccEEEecCCceEEeecCcc
Confidence 9998 9999993 34568888899999999999999999 56999999999999999999999999998
Q ss_pred cc-----------------------------CCC-CcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhcc--
Q 003594 614 IC-----------------------------DQL-NVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDG-- 661 (808)
Q Consensus 614 ~~-----------------------------~~~-t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~-- 661 (808)
.. ..| ....||||.|++++.|++|+.||...... .+........+.
T Consensus 468 ~vf~~~~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~--~~~~~~~~~~~~~~ 545 (601)
T KOG0590|consen 468 SVFRYPWEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKS--DNSFKTNNYSDQRN 545 (601)
T ss_pred eeeccCcchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCcccccccc--ccchhhhccccccc
Confidence 54 012 24589999999999999999998653221 000000000111
Q ss_pred -CCCC--CChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 662 -NAGI--WPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 662 -~~~~--~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
..+. .....+.....++.++|+.+ |..|.++.+|++
T Consensus 546 ~~~~~~~~~~~lp~~~~~~~~~~l~~~--P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 546 IFEGPNRLLSLLPRETRIIIYRMLQLD--PTKRITIEQILN 584 (601)
T ss_pred cccChHHHHHhchhhHHHHHHHHccCC--hhheecHHHHhh
Confidence 0111 12356788899999999999 999999999875
No 424
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.66 E-value=3e-16 Score=165.96 Aligned_cols=205 Identities=16% Similarity=0.194 Sum_probs=132.6
Q ss_pred cccccCCceEEEEEEE--CCeEEEEEEcc-CC----CCHHHHHHHHHHHhccCC----------CCccceeecc------
Q 003594 468 RLKCAGDWTNVYRGRL--NHASVAIKTLN-NG----LSEEDFQAKVSFLTAVRH----------PHLVAVMGCC------ 524 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~--~~~~vAiK~l~-~~----~~~~~~~~Ei~il~~l~H----------pnIv~l~g~~------ 524 (808)
.++|.|+|+.||.+++ +|+.+|+|++. .. ...+.+.+|.-....+.+ -.++..++..
T Consensus 18 ~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~i~~~~ 97 (288)
T PF14531_consen 18 RIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLRIPGKP 97 (288)
T ss_dssp EEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEEETTS-
T ss_pred cccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEEEcCCC
Confidence 5678899999999999 57999999987 22 123567777655555332 1122111111
Q ss_pred ------c--c-----ceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecC
Q 003594 525 ------S--E-----LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGS 591 (808)
Q Consensus 525 ------~--~-----~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrD 591 (808)
. . +.+++|+-+. ++|.+++..-.... .....+....++.+..|+++.+++||+ .|++|+|
T Consensus 98 ~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~---~~~~~l~~~arl~lT~Q~I~lvA~Lh~---~GlVHgd 170 (288)
T PF14531_consen 98 PFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRA---QTHSPLAFAARLSLTVQMIRLVANLHS---YGLVHGD 170 (288)
T ss_dssp SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHT---TTSHHHHHHHHHHHHHHHHHHHHHHHH---TTEEEST
T ss_pred cceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcc---cccchhHHHHHHHHHHHHHHHHHHHhh---cceEecc
Confidence 0 0 3467888885 79988864321100 112345566677888999999999999 6699999
Q ss_pred CCCCCcccCCCccEEEEeCCCccc------------------------------CCCCcchhhHhHHHHHHHHHcCCCCc
Q 003594 592 LTPSSILLDRNLVAKISGLGLNIC------------------------------DQLNVRSDIRAFGTLLLHLLTGRNWA 641 (808)
Q Consensus 592 LKp~NILld~~~~~kl~DfGla~~------------------------------~~~t~ksDVwS~Gvil~elltG~~P~ 641 (808)
|+|+|+|++.+|.++|+||+.... -.++.+.|.|+||+++|.|++|+.||
T Consensus 171 i~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~lWC~~lPf 250 (288)
T PF14531_consen 171 IKPENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSLWCGRLPF 250 (288)
T ss_dssp -SGGGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHHHHSS-ST
T ss_pred cceeeEEEcCCCCEEEcChHHHeecCceeeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHHHHccCCC
Confidence 999999999999999999986422 02578899999999999999999999
Q ss_pred hhhHHHhhhcHHHHHHHhccCCCCCChhhHHHHHHHHHHhhccCCCcCcc
Q 003594 642 GLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAGIALKCLSADQDANRD 691 (808)
Q Consensus 642 ~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~R 691 (808)
+........+. .-..+. +.++.+..||..+|+.| |++|
T Consensus 251 ~~~~~~~~~~~---------~f~~C~-~~Pe~v~~LI~~lL~~~--~~~R 288 (288)
T PF14531_consen 251 GLSSPEADPEW---------DFSRCR-DMPEPVQFLIRGLLQRN--PEDR 288 (288)
T ss_dssp CCCGGGSTSGG---------GGTTSS----HHHHHHHHHHT-SS--GGGS
T ss_pred CCCCccccccc---------cchhcC-CcCHHHHHHHHHHccCC--cccC
Confidence 86533211111 112233 78899999999999999 7665
No 425
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.66 E-value=7.6e-17 Score=188.13 Aligned_cols=208 Identities=19% Similarity=0.233 Sum_probs=157.5
Q ss_pred ccccCCceEEEEEEECCeEEEEEEccC---CCCHHHHHH---HHHHHhccCCCCccceeecccc--ceEEEEeecCCCCH
Q 003594 469 LKCAGDWTNVYRGRLNHASVAIKTLNN---GLSEEDFQA---KVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNL 540 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~~~~~vAiK~l~~---~~~~~~~~~---Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL 540 (808)
-+|++.|=.|.+|.++...|+||++-. ..+...|.+ |+. ...++|||.+.+.-+-.. ..|||-+|+. -+|
T Consensus 30 ~LGstRFlKv~r~k~~eG~vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRqyvk-hnL 107 (1431)
T KOG1240|consen 30 NLGSTRFLKVARAKDREGLVVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQYVK-HNL 107 (1431)
T ss_pred ccCchhhhhhhhccCCCceEEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHHHHh-hhh
Confidence 357899999999999766699999862 333344444 444 455689999998776543 6689999996 599
Q ss_pred HHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-----
Q 003594 541 RDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC----- 615 (808)
Q Consensus 541 ~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~----- 615 (808)
+|.| ..++.|..-+..-|+.|++.||...|. .+|+|||||.+||||+.=+=+.|+||..-+.
T Consensus 108 yDRl----------STRPFL~~iEKkWiaFQLL~al~qcH~---~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPe 174 (1431)
T KOG1240|consen 108 YDRL----------STRPFLVLIEKKWIAFQLLKALSQCHK---LGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPE 174 (1431)
T ss_pred hhhh----------ccchHHHHHHHHHHHHHHHHHHHHHHH---cCccccccccceEEEeeechhhhhcccccCCccCCC
Confidence 9999 455677888888899999999999999 6699999999999998766788888875432
Q ss_pred --------------------------------------CCCCcchhhHhHHHHHHHHHc-CCCCchhhHH-Hh-hhcHHH
Q 003594 616 --------------------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEK-AM-ALDQTT 654 (808)
Q Consensus 616 --------------------------------------~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~-~~-~~~~~~ 654 (808)
...+++.||||+||++.||++ |+|||.+..- ++ ......
T Consensus 175 DNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~LSQL~aYr~~~~~~ 254 (1431)
T KOG1240|consen 175 DNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTLSQLLAYRSGNADD 254 (1431)
T ss_pred CCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccHHHHHhHhccCccC
Confidence 126789999999999999998 7999976422 10 111112
Q ss_pred HHHHhccCCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHH
Q 003594 655 LMQVLDGNAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 655 ~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~ 700 (808)
....+... ....+++|++.|++.| |..|.++.+.|+.
T Consensus 255 ~e~~Le~I-------ed~~~Rnlil~Mi~rd--Ps~RlSAedyL~~ 291 (1431)
T KOG1240|consen 255 PEQLLEKI-------EDVSLRNLILSMIQRD--PSKRLSAEDYLQK 291 (1431)
T ss_pred HHHHHHhC-------cCccHHHHHHHHHccC--chhccCHHHHHHh
Confidence 22222211 1237899999999999 9999999999876
No 426
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.64 E-value=1.1e-15 Score=155.44 Aligned_cols=131 Identities=19% Similarity=0.144 Sum_probs=103.6
Q ss_pred cccccccccCCceEEEEEEE-CCeEEEEEEccCCC------------------------CHHHHHHHHHHHhccCCC--C
Q 003594 464 SERFRLKCAGDWTNVYRGRL-NHASVAIKTLNNGL------------------------SEEDFQAKVSFLTAVRHP--H 516 (808)
Q Consensus 464 ~~~~~i~g~G~~g~Vy~~~~-~~~~vAiK~l~~~~------------------------~~~~~~~Ei~il~~l~Hp--n 516 (808)
+.....+|.|+||.||++.. +|+.||||+++... ....+..|+.++..+.|+ .
T Consensus 17 ~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~ 96 (198)
T cd05144 17 ESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGFP 96 (198)
T ss_pred hhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCCC
Confidence 33446678999999999998 68999999876221 012367789999999887 4
Q ss_pred ccceeeccccceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCC
Q 003594 517 LVAVMGCCSELKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSS 596 (808)
Q Consensus 517 Iv~l~g~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~N 596 (808)
++..++. ...++||||++|++|..... . .....++.+++.++.++|. .+|+||||||+|
T Consensus 97 v~~~~~~--~~~~lv~e~~~g~~L~~~~~----------~------~~~~~~~~~i~~~l~~lh~---~gi~H~Dl~p~N 155 (198)
T cd05144 97 VPKPIDW--NRHAVVMEYIDGVELYRVRV----------L------EDPEEVLDEILEEIVKAYK---HGIIHGDLSEFN 155 (198)
T ss_pred CCceeec--CCceEEEEEeCCcchhhccc----------c------ccHHHHHHHHHHHHHHHHH---CCCCcCCCCccc
Confidence 4555543 35689999999999876541 0 2345788999999999999 669999999999
Q ss_pred cccCCCccEEEEeCCCccc
Q 003594 597 ILLDRNLVAKISGLGLNIC 615 (808)
Q Consensus 597 ILld~~~~~kl~DfGla~~ 615 (808)
|+++.++.++|+|||.+..
T Consensus 156 ill~~~~~~~liDfg~~~~ 174 (198)
T cd05144 156 ILVDDDEKIYIIDWPQMVS 174 (198)
T ss_pred EEEcCCCcEEEEECCcccc
Confidence 9999999999999999854
No 427
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.63 E-value=2.2e-15 Score=176.47 Aligned_cols=128 Identities=24% Similarity=0.284 Sum_probs=105.5
Q ss_pred ccccccCCceEEEEEEECCeEEEEEEcc-CC-C--------CHHHHHHHHHHHhccCCCCccceeecccc--ceEEEEee
Q 003594 467 FRLKCAGDWTNVYRGRLNHASVAIKTLN-NG-L--------SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEY 534 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~~~~~vAiK~l~-~~-~--------~~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey 534 (808)
.+++|+|+||.||+|.+.+..+++|+.. .. . ..+.+.+|+.++..++|++++..+.++.+ ..++||||
T Consensus 338 ~~~iG~G~~g~Vy~~~~~~~~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~E~ 417 (535)
T PRK09605 338 DHLIGKGAEADIKKGEYLGRDAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKTIVMEY 417 (535)
T ss_pred cceeccCCcEEEEEEeecCccceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCEEEEEe
Confidence 4677899999999999977666666532 11 1 12468899999999999999887666543 78999999
Q ss_pred cCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCcc
Q 003594 535 MPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNI 614 (808)
Q Consensus 535 ~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~ 614 (808)
++|++|.+++. ....++.+++.+|.|||+ .+|+||||||+|||+ .++.++|+|||+++
T Consensus 418 ~~g~~L~~~l~------------------~~~~~~~~i~~~L~~lH~---~giiHrDlkp~NILl-~~~~~~liDFGla~ 475 (535)
T PRK09605 418 IGGKDLKDVLE------------------GNPELVRKVGEIVAKLHK---AGIVHGDLTTSNFIV-RDDRLYLIDFGLGK 475 (535)
T ss_pred cCCCcHHHHHH------------------HHHHHHHHHHHHHHHHHh---CCCccCCCChHHEEE-ECCcEEEEeCcccc
Confidence 99999999882 346789999999999999 569999999999999 67899999999997
Q ss_pred cC
Q 003594 615 CD 616 (808)
Q Consensus 615 ~~ 616 (808)
..
T Consensus 476 ~~ 477 (535)
T PRK09605 476 YS 477 (535)
T ss_pred cC
Confidence 63
No 428
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.62 E-value=1.3e-16 Score=178.59 Aligned_cols=200 Identities=22% Similarity=0.241 Sum_probs=164.9
Q ss_pred cccCCceEEEEEE-----ECCeEEEEEEccCCC----CHHHHHHHHHHHhccC-CCCccceeecccc--ceEEEEeecCC
Q 003594 470 KCAGDWTNVYRGR-----LNHASVAIKTLNNGL----SEEDFQAKVSFLTAVR-HPHLVAVMGCCSE--LKCIVFEYMPN 537 (808)
Q Consensus 470 ~g~G~~g~Vy~~~-----~~~~~vAiK~l~~~~----~~~~~~~Ei~il~~l~-HpnIv~l~g~~~~--~~~lV~Ey~~~ 537 (808)
.|.|.||.|+.+. +.|.-+|+|+++... .......|..++..++ ||.+|++...+.. ..+++++|..|
T Consensus 2 lg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~rg 81 (612)
T KOG0603|consen 2 LGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLRG 81 (612)
T ss_pred CCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhccc
Confidence 4789999998754 356789999987221 1225667888899997 9999999888855 78999999999
Q ss_pred CCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc--
Q 003594 538 GNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-- 615 (808)
Q Consensus 538 gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-- 615 (808)
|.|...+ .....+.+.....+...++-|+.++|. .+|+|||+|++||+++.+|++|+.|||+++.
T Consensus 82 g~lft~l----------~~~~~f~~~~~~~~~aelaLald~lh~---l~iiyrd~k~enilld~~Ghi~~tdfglske~v 148 (612)
T KOG0603|consen 82 GDLFTRL----------SKEVMFDELDVAFYLAELALALDHLHK---LGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAV 148 (612)
T ss_pred chhhhcc----------ccCCchHHHHHHHHHHHHHHHHhhcch---hHHHHhcccccceeecccCccccCCchhhhHhH
Confidence 9999988 456678888888899999999999999 5599999999999999999999999999864
Q ss_pred -----------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHHHHHHH
Q 003594 616 -----------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAGIA 678 (808)
Q Consensus 616 -----------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li 678 (808)
..+...+|.||||++++||+||..||.. .. ...+-......|...+..+..++
T Consensus 149 ~~~~~cgt~eymApEI~~gh~~a~D~ws~gvl~felltg~~pf~~---------~~-~~~Il~~~~~~p~~l~~~a~~~~ 218 (612)
T KOG0603|consen 149 KEKIACGTYEYRAPEIINGHLSAADWWSFGVLAFELLTGTLPFGG---------DT-MKRILKAELEMPRELSAEARSLF 218 (612)
T ss_pred hhhhcccchhhhhhHhhhccCCcccchhhhhhHHHHhhCCCCCch---------HH-HHHHhhhccCCchhhhHHHHHHH
Confidence 2367889999999999999999999975 11 22223345567888999999999
Q ss_pred HHhhccCCCcCccccH
Q 003594 679 LKCLSADQDANRDLRI 694 (808)
Q Consensus 679 ~~Cl~~dp~p~~Rps~ 694 (808)
..++..+ |..|...
T Consensus 219 ~~l~~r~--p~nrLg~ 232 (612)
T KOG0603|consen 219 RQLFKRN--PENRLGA 232 (612)
T ss_pred HHHHhhC--HHHHhcc
Confidence 9999999 7788764
No 429
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.60 E-value=2.5e-15 Score=158.78 Aligned_cols=168 Identities=19% Similarity=0.243 Sum_probs=127.1
Q ss_pred CCCCccceeecccc-----------------------------ceEEEEeecCCCCHHHHHhhccccccccccCCCCCHH
Q 003594 513 RHPHLVAVMGCCSE-----------------------------LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWL 563 (808)
Q Consensus 513 ~HpnIv~l~g~~~~-----------------------------~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~ 563 (808)
+|||||++.++|.+ ..|+||.-++ .+|..++.. ...+..
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~-----------~~~s~r 341 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWT-----------RHRSYR 341 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhc-----------CCCchH
Confidence 69999999988732 3489998886 699999942 345666
Q ss_pred HHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCccc--CCC--ccEEEEeCCCcccC-----------------------
Q 003594 564 DRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILL--DRN--LVAKISGLGLNICD----------------------- 616 (808)
Q Consensus 564 ~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILl--d~~--~~~kl~DfGla~~~----------------------- 616 (808)
...-|+.|++.|+.|||.+ +|.|||+|.+|||| |++ -.+.|+|||.+-..
T Consensus 342 ~~~~~laQlLEav~hL~~h---gvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lm 418 (598)
T KOG4158|consen 342 TGRVILAQLLEAVTHLHKH---GVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLM 418 (598)
T ss_pred HHHHHHHHHHHHHHHHHHc---cchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceec
Confidence 7778999999999999994 59999999999999 444 46789999987320
Q ss_pred --------------CCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccCCCCCChhhHHHHHHHHHHhh
Q 003594 617 --------------QLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAGIALKCL 682 (808)
Q Consensus 617 --------------~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl 682 (808)
-.-.|+|.|+.|.+.||+++...||...... ..+... .-....+..|..+++.+.+|+...|
T Consensus 419 APEi~ta~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGem-~L~~r~---Yqe~qLPalp~~vpp~~rqlV~~lL 494 (598)
T KOG4158|consen 419 APEIATAVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGEM-LLDTRT---YQESQLPALPSRVPPVARQLVFDLL 494 (598)
T ss_pred chhhhhcCCCCceeeccchhhhhhhhhhHHHHhccCCcccccchh-eechhh---hhhhhCCCCcccCChHHHHHHHHHh
Confidence 0125899999999999999999999752211 011111 2223456778889999999999999
Q ss_pred ccCCCcCccccHHhhHHHH
Q 003594 683 SADQDANRDLRIAGVMKEL 701 (808)
Q Consensus 683 ~~dp~p~~Rps~~evl~~L 701 (808)
+.| |.+|++..-....|
T Consensus 495 ~r~--pskRvsp~iAANvl 511 (598)
T KOG4158|consen 495 KRD--PSKRVSPNIAANVL 511 (598)
T ss_pred cCC--ccccCCccHHHhHH
Confidence 999 88999854444444
No 430
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.59 E-value=9.5e-15 Score=174.40 Aligned_cols=159 Identities=18% Similarity=0.267 Sum_probs=123.2
Q ss_pred cccccccCCceEEEEEEE-CCeEEEEEEccCCCCHHHHHHHHHHHhccC---CCCccceeec--cccceEEEEeecCCCC
Q 003594 466 RFRLKCAGDWTNVYRGRL-NHASVAIKTLNNGLSEEDFQAKVSFLTAVR---HPHLVAVMGC--CSELKCIVFEYMPNGN 539 (808)
Q Consensus 466 ~~~i~g~G~~g~Vy~~~~-~~~~vAiK~l~~~~~~~~~~~Ei~il~~l~---HpnIv~l~g~--~~~~~~lV~Ey~~~gs 539 (808)
..+.+|.|+||.||+|.. +|+.||+|+-++...- +|.-=.+++.+|+ -+-|..+..+ |.+..+||+||.+.|+
T Consensus 702 I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~W-EfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S~lv~ey~~~Gt 780 (974)
T KOG1166|consen 702 ISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPW-EFYICLQVMERLKPQMLPSIMHISSAHVFQNASVLVSEYSPYGT 780 (974)
T ss_pred EEeeeccccceEEEEeecCCCcEEEEEeecCCCce-eeeehHHHHHhhchhhhcchHHHHHHHccCCcceeeeecccccc
Confidence 346678999999999998 7899999998744322 1222233455555 1223333222 3567899999999999
Q ss_pred HHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccC-------CCccEEEEeCCC
Q 003594 540 LRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLD-------RNLVAKISGLGL 612 (808)
Q Consensus 540 L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld-------~~~~~kl~DfGl 612 (808)
|.+++ .....++|.....|+.|++.-+..||.. +||||||||+|+||. .+..++|+|||.
T Consensus 781 lld~~----------N~~~~m~e~lv~~~~~qml~ive~lH~~---~IIHgDiKPDNfll~~~~~~~~~~~~l~lIDfG~ 847 (974)
T KOG1166|consen 781 LLDLI----------NTNKVMDEYLVMFFSCQMLRIVEHLHAM---GIIHGDIKPDNFLLRREICADSDSKGLYLIDFGR 847 (974)
T ss_pred HHHhh----------ccCCCCCchhhhHHHHHHHHHHHHHHhc---ceecccCCcceeEeecccCCCCcccceEEEeccc
Confidence 99999 4667899999999999999999999994 599999999999994 346799999998
Q ss_pred ccc---------------------------CCCCcchhhHhHHHHHHHHHcCC
Q 003594 613 NIC---------------------------DQLNVRSDIRAFGTLLLHLLTGR 638 (808)
Q Consensus 613 a~~---------------------------~~~t~ksDVwS~Gvil~elltG~ 638 (808)
+.- ..++...|.|.|..+++-||.|+
T Consensus 848 siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~ 900 (974)
T KOG1166|consen 848 SIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGK 900 (974)
T ss_pred ceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHH
Confidence 742 34678888888888888888886
No 431
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.56 E-value=3.2e-14 Score=136.20 Aligned_cols=145 Identities=18% Similarity=0.188 Sum_probs=117.7
Q ss_pred cccccCCceEEEEEEECCeEEEEEEccCCCCHHHHHHHHHHHhccCC--CCccceeecccc--ceEEEEeecCCCCHHHH
Q 003594 468 RLKCAGDWTNVYRGRLNHASVAIKTLNNGLSEEDFQAKVSFLTAVRH--PHLVAVMGCCSE--LKCIVFEYMPNGNLRDK 543 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~~~~~vAiK~l~~~~~~~~~~~Ei~il~~l~H--pnIv~l~g~~~~--~~~lV~Ey~~~gsL~~~ 543 (808)
+.+|.|.++.||++..++..+++|..........+.+|+.++..++| ++++++++++.. ..+++|||++++++..+
T Consensus 4 ~~i~~g~~~~v~~~~~~~~~~~iK~~~~~~~~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~~~~~~ 83 (155)
T cd05120 4 KLLKGGLTNRVYLLGTKDEDYVLKINPSREKGADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGETLDEV 83 (155)
T ss_pred eecccccccceEEEEecCCeEEEEecCCCCchhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCeecccC
Confidence 45678999999999998899999998754335679999999999976 588898888765 78999999988765432
Q ss_pred HhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCcccCCCCcchh
Q 003594 544 LFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNICDQLNVRSD 623 (808)
Q Consensus 544 l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~~~~t~ksD 623 (808)
+......++.+++.+|.+||.....+++|+|++|.||+++..+.++++|||++... ..
T Consensus 84 -----------------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~~-----~~ 141 (155)
T cd05120 84 -----------------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGYG-----PP 141 (155)
T ss_pred -----------------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccCC-----Ch
Confidence 45566778999999999999965457999999999999999899999999998642 23
Q ss_pred hHhHHHHHHHH
Q 003594 624 IRAFGTLLLHL 634 (808)
Q Consensus 624 VwS~Gvil~el 634 (808)
.|-|+.+++-+
T Consensus 142 ~~d~~~~~~~~ 152 (155)
T cd05120 142 AFDLAAALLFN 152 (155)
T ss_pred HHHHHHHHHHh
Confidence 45666666544
No 432
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.56 E-value=1.7e-14 Score=151.02 Aligned_cols=136 Identities=14% Similarity=0.097 Sum_probs=105.5
Q ss_pred ccccccccc-cCCceEEEEEEECCeEEEEEEccCC---------------CCHHHHHHHHHHHhccCCCCc--cceeecc
Q 003594 463 FSERFRLKC-AGDWTNVYRGRLNHASVAIKTLNNG---------------LSEEDFQAKVSFLTAVRHPHL--VAVMGCC 524 (808)
Q Consensus 463 f~~~~~i~g-~G~~g~Vy~~~~~~~~vAiK~l~~~---------------~~~~~~~~Ei~il~~l~HpnI--v~l~g~~ 524 (808)
|.....++| .||.|+||.+...+..++||.+... .....+.+|+.++.+|+|++| +..++++
T Consensus 32 ~~~~~~~lg~~~g~gtv~~v~~~~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~ 111 (239)
T PRK01723 32 WQQQARVVGSAKGRGTTWFVQTPGVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAAR 111 (239)
T ss_pred HhhcCceeecCCCCccEEEEEeCCceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeee
Confidence 333345555 7889999999999999999987521 123467889999999998885 6667664
Q ss_pred cc------ceEEEEeecCC-CCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCc
Q 003594 525 SE------LKCIVFEYMPN-GNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSI 597 (808)
Q Consensus 525 ~~------~~~lV~Ey~~~-gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NI 597 (808)
.. ..+|||||++| .+|.+++.. ..++.. .+.+|+.+|.+||+ .||+||||||.||
T Consensus 112 ~~~~~~~~~~~lV~e~l~G~~~L~~~l~~-----------~~l~~~----~~~~i~~~l~~lH~---~GI~HrDlkp~NI 173 (239)
T PRK01723 112 VVRHGLFYRADILIERIEGARDLVALLQE-----------APLSEE----QWQAIGQLIARFHD---AGVYHADLNAHNI 173 (239)
T ss_pred eeecCcceeeeEEEEecCCCCCHHHHHhc-----------CCCCHH----HHHHHHHHHHHHHH---CCCCCCCCCchhE
Confidence 22 23599999997 699998832 234443 36789999999999 5699999999999
Q ss_pred ccCCCccEEEEeCCCcccC
Q 003594 598 LLDRNLVAKISGLGLNICD 616 (808)
Q Consensus 598 Lld~~~~~kl~DfGla~~~ 616 (808)
|++.++.++|+|||.+...
T Consensus 174 Lv~~~~~v~LIDfg~~~~~ 192 (239)
T PRK01723 174 LLDPDGKFWLIDFDRGELR 192 (239)
T ss_pred EEcCCCCEEEEECCCcccC
Confidence 9999999999999998764
No 433
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.53 E-value=2.1e-14 Score=144.34 Aligned_cols=132 Identities=16% Similarity=0.178 Sum_probs=93.5
Q ss_pred cccccCCceEEEEEEE-CCeEEEEEEccCCCC-H---HHH----------------------HHHHHHHhccCCCC--cc
Q 003594 468 RLKCAGDWTNVYRGRL-NHASVAIKTLNNGLS-E---EDF----------------------QAKVSFLTAVRHPH--LV 518 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~-~~~~vAiK~l~~~~~-~---~~~----------------------~~Ei~il~~l~Hpn--Iv 518 (808)
+.+|+|+||.||+|.+ +|+.||||+++.... . ..+ ..|...+..+.+.. +.
T Consensus 3 ~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~ 82 (187)
T cd05119 3 GPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPVP 82 (187)
T ss_pred cccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCCC
Confidence 4578999999999998 489999999873211 1 111 24556666664433 34
Q ss_pred ceeeccccceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcc
Q 003594 519 AVMGCCSELKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSIL 598 (808)
Q Consensus 519 ~l~g~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NIL 598 (808)
+.+++ ...++||||++|+++....... .... .....++.+++.++.++|.. .+|+||||||+||+
T Consensus 83 ~~~~~--~~~~lv~e~~~g~~~~~~~l~~----------~~~~-~~~~~~~~~~~~~l~~lh~~--~~ivH~Dl~p~Nil 147 (187)
T cd05119 83 KPIDL--NRHVLVMEFIGGDGIPAPRLKD----------VRLL-EDPEELYDQILELMRKLYRE--AGLVHGDLSEYNIL 147 (187)
T ss_pred ceEec--CCCEEEEEEeCCCCccChhhhh----------hhhc-ccHHHHHHHHHHHHHHHhhc--cCcCcCCCChhhEE
Confidence 44443 3568999999986543221100 0011 56778999999999999982 24999999999999
Q ss_pred cCCCccEEEEeCCCccc
Q 003594 599 LDRNLVAKISGLGLNIC 615 (808)
Q Consensus 599 ld~~~~~kl~DfGla~~ 615 (808)
++ ++.++|+|||.+..
T Consensus 148 i~-~~~~~liDfg~a~~ 163 (187)
T cd05119 148 VD-DGKVYIIDVPQAVE 163 (187)
T ss_pred EE-CCcEEEEECccccc
Confidence 99 89999999999854
No 434
>PRK15456 universal stress protein UspG; Provisional
Probab=99.52 E-value=9.6e-14 Score=133.49 Aligned_cols=139 Identities=12% Similarity=0.058 Sum_probs=97.6
Q ss_pred CeEEEEecCCc-ccchhhHHHHhhhccCCCcEEEEEEEeccCCcCCcccCCCCCcCCCCCChHHHHHHHHHHHhhHHHHH
Q 003594 6 PKVYVAVGNDL-QDGYRTLDWTIRKWKAQSISIVILHVTYNISIKDFVYTPFGKLPATSLSDEKLEILKKYEQGKTDNLL 84 (808)
Q Consensus 6 ~~V~VAVd~s~-~ss~~AL~WAl~n~~~~~~~ivLlHV~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll 84 (808)
.+|+||||+|+ +.+..|+.||+. +......|++|||.++.. ... . ... . . ....+.+..++..++.|
T Consensus 3 ~~ILv~vD~S~~~~s~~al~~A~~-la~~~~~l~llhv~~~~~---~~~-~-~~~---~-~--~~~~~~~~~~~~~~~~l 70 (142)
T PRK15456 3 KTIIMPVDVFEMELSDKAVRHAEF-LAQDDGVIHLLHVLPGSA---SLS-L-HRF---A-A--DVRRFEEHLQHEAEERL 70 (142)
T ss_pred ccEEEeccCCchhHHHHHHHHHHH-HHhcCCeEEEEEEecCcc---ccc-c-ccc---c-c--chhhHHHHHHHHHHHHH
Confidence 47999999995 334889999996 444355899999987642 110 0 000 0 0 11233444555666777
Q ss_pred HHHHhhccCCCceEEEEEcCCccHHHHHHHHHHHhCCcEEEecccccCCCCCCccccCcccccccccCCCcceEEEEe
Q 003594 85 SKYLGFCGKVKAEILKVEKSDEPVHKLILDLVSRLTITKLVMGLSFMIPSAGKSRTAVSGSYFVHHHMPDYCELFIIC 162 (808)
Q Consensus 85 ~~~~~~C~~~~v~~~~i~~~~~dv~~~I~e~i~~~~i~~LVmGs~~~g~~~~kr~~~~svs~yv~~~ap~~C~V~vv~ 162 (808)
.++.......++++..... .|+|++.|+++++++++|+||||++++ + +.+.+.||++++|.++++ |+|+||.
T Consensus 71 ~~~~~~~~~~~~~v~~~v~-~G~~~~~I~~~a~~~~~DLIVmG~~g~--~-~~~~llGS~a~~v~~~a~--~pVLvV~ 142 (142)
T PRK15456 71 QTMVSHFTIDPSRIKQHVR-FGSVRDEVNELAEELGADVVVIGSRNP--S-ISTHLLGSNASSVIRHAN--LPVLVVR 142 (142)
T ss_pred HHHHHHhCCCCcceEEEEc-CCChHHHHHHHHhhcCCCEEEEcCCCC--C-ccceecCccHHHHHHcCC--CCEEEeC
Confidence 7777666544444444443 379999999999999999999999653 3 356788999999999999 9999984
No 435
>PRK15005 universal stress protein F; Provisional
Probab=99.51 E-value=1.7e-13 Score=131.87 Aligned_cols=141 Identities=11% Similarity=0.142 Sum_probs=96.9
Q ss_pred CeEEEEecCCccc-chhhHHHHhhhccCCCcEEEEEEEeccCCcCCcccCCCCCcCCCCCChHHHHHHHHHHHhhHHHHH
Q 003594 6 PKVYVAVGNDLQD-GYRTLDWTIRKWKAQSISIVILHVTYNISIKDFVYTPFGKLPATSLSDEKLEILKKYEQGKTDNLL 84 (808)
Q Consensus 6 ~~V~VAVd~s~~s-s~~AL~WAl~n~~~~~~~ivLlHV~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll 84 (808)
.+|+||||+|+.+ +..|+.||++-....+..|+|+||.++.+ ... ..+..+ ....... ...++..++.|
T Consensus 3 ~~ILv~~D~s~~~~~~~a~~~a~~la~~~~~~l~ll~v~~~~~---~~~-~~~~~~--~~~~~~~----~~~~~~~~~~l 72 (144)
T PRK15005 3 RTILVPIDISDSELTQRVISHVEAEAKIDDAEVHFLTVIPSLP---YYA-SLGLAY--SAELPAM----DDLKAEAKSQL 72 (144)
T ss_pred ccEEEecCCCchhHHHHHHHHHHHHHhccCCeEEEEEEEccCc---ccc-cccccc--cccchHH----HHHHHHHHHHH
Confidence 5799999999875 47899999987777788999999987643 110 111000 0011111 12233344556
Q ss_pred HHHHhhccCCCceEEEEEcCCccHHHHHHHHHHHhCCcEEEecccccCCCCCCccccCcccccccccCCCcceEEEEe
Q 003594 85 SKYLGFCGKVKAEILKVEKSDEPVHKLILDLVSRLTITKLVMGLSFMIPSAGKSRTAVSGSYFVHHHMPDYCELFIIC 162 (808)
Q Consensus 85 ~~~~~~C~~~~v~~~~i~~~~~dv~~~I~e~i~~~~i~~LVmGs~~~g~~~~kr~~~~svs~yv~~~ap~~C~V~vv~ 162 (808)
..+...+...++.+..... .|+|++.|+++++++++|.||||++ + .+ +.+.+.||++.+|++++| |+|+||.
T Consensus 73 ~~~~~~~~~~~~~~~~~v~-~G~p~~~I~~~a~~~~~DLIV~Gs~-~-~~-~~~~llGS~a~~vl~~a~--cpVlvVr 144 (144)
T PRK15005 73 EEIIKKFKLPTDRVHVHVE-EGSPKDRILELAKKIPADMIIIASH-R-PD-ITTYLLGSNAAAVVRHAE--CSVLVVR 144 (144)
T ss_pred HHHHHHhCCCCCceEEEEe-CCCHHHHHHHHHHHcCCCEEEEeCC-C-CC-chheeecchHHHHHHhCC--CCEEEeC
Confidence 6655555544444443333 4799999999999999999999996 2 22 366788999999999999 9999983
No 436
>cd01987 USP_OKCHK USP domain is located between the N-terminal sensor domain and C-terminal catalytic domain of this Osmosensitive K+ channel histidine kinase family. The family of KdpD sensor kinase proteins regulates the kdpFABC operon responsible for potassium transport. The USP domain is homologous to the universal stress protein Usp Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity.
Probab=99.47 E-value=1.2e-13 Score=129.36 Aligned_cols=123 Identities=15% Similarity=0.154 Sum_probs=95.3
Q ss_pred eEEEEecCCcccchhhHHHHhhhccCCCcEEEEEEEeccCCcCCcccCCCCCcCCCCCChHHHHHHHHHHHhhHHHHHHH
Q 003594 7 KVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHVTYNISIKDFVYTPFGKLPATSLSDEKLEILKKYEQGKTDNLLSK 86 (808)
Q Consensus 7 ~V~VAVd~s~~ss~~AL~WAl~n~~~~~~~ivLlHV~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 86 (808)
+|+||||+++.+ ..|++||+......+..|.+|||.++.. . ... +..++.++.
T Consensus 1 ~Ilv~vd~s~~s-~~al~~a~~la~~~~~~l~ll~v~~~~~------~--------~~~------------~~~~~~l~~ 53 (124)
T cd01987 1 RILVCISGGPNA-ERLIRRAARLADRLKAPWYVVYVETPRL------N--------RLS------------EAERRRLAE 53 (124)
T ss_pred CEEEEECCCcch-HHHHHHHHHHHHHhCCCEEEEEEecCcc------c--------cCC------------HHHHHHHHH
Confidence 589999999877 8899999977666677899999986532 0 001 123456677
Q ss_pred HHhhccCCCceEEEEEcCCccHHHHHHHHHHHhCCcEEEecccccCCCCCCccccCcccccccccCCCcceEEEE
Q 003594 87 YLGFCGKVKAEILKVEKSDEPVHKLILDLVSRLTITKLVMGLSFMIPSAGKSRTAVSGSYFVHHHMPDYCELFII 161 (808)
Q Consensus 87 ~~~~C~~~~v~~~~i~~~~~dv~~~I~e~i~~~~i~~LVmGs~~~g~~~~kr~~~~svs~yv~~~ap~~C~V~vv 161 (808)
+...+++.++++..+. +++|+++|++++++++++.||||++. ++.+.+.+.||++++|++++ ..|+|+||
T Consensus 54 ~~~~~~~~~~~~~~~~--~~~~~~~I~~~~~~~~~dllviG~~~--~~~~~~~~~Gs~~~~v~~~a-~~~~v~v~ 123 (124)
T cd01987 54 ALRLAEELGAEVVTLP--GDDVAEAIVEFAREHNVTQIVVGKSR--RSRWRELFRGSLVDRLLRRA-GNIDVHIV 123 (124)
T ss_pred HHHHHHHcCCEEEEEe--CCcHHHHHHHHHHHcCCCEEEeCCCC--CchHHHHhcccHHHHHHHhC-CCCeEEEe
Confidence 7777766677665443 57899999999999999999999955 44447789999999999999 33999997
No 437
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.46 E-value=5.1e-14 Score=164.92 Aligned_cols=178 Identities=24% Similarity=0.289 Sum_probs=124.7
Q ss_pred ccccccccccccCCceEEEEEEEC--CeEEEEEEccCCCCHHHHHHHHHHHhccCCCCccceeeccccceEEEEeecCCC
Q 003594 461 EDFSERFRLKCAGDWTNVYRGRLN--HASVAIKTLNNGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSELKCIVFEYMPNG 538 (808)
Q Consensus 461 ~~f~~~~~i~g~G~~g~Vy~~~~~--~~~vAiK~l~~~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~~~~lV~Ey~~~g 538 (808)
++|. .++++..|+||.||..++. .+++|+|+-+... ||+ | +.-+.+..+.| |
T Consensus 83 ~df~-~IklisngAygavylvrh~~trqrfa~kiNkq~l----------ilR-----n----ilt~a~npfvv------g 136 (1205)
T KOG0606|consen 83 SDFN-TIKLISNGAYGAVYLVRHKETRQRFAMKINKQNL----------ILR-----N----ILTFAGNPFVV------G 136 (1205)
T ss_pred cccc-eeEeeccCCCCceeeeeccccccchhhcccccch----------hhh-----c----cccccCCccee------c
Confidence 3454 4578889999999999884 6889995433211 111 1 22233344444 5
Q ss_pred CHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc---
Q 003594 539 NLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC--- 615 (808)
Q Consensus 539 sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~--- 615 (808)
+-...+ ...++++-. ++.+++|||+ .+|+|||+||+|.||+.-|++|+.|||+++.
T Consensus 137 Dc~tll----------k~~g~lPvd--------mvla~Eylh~---ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLm 195 (1205)
T KOG0606|consen 137 DCATLL----------KNIGPLPVD--------MVLAVEYLHS---YGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLM 195 (1205)
T ss_pred hhhhhc----------ccCCCCcch--------hhHHhHhhcc---CCeecCCCCCCcceeeecccccccchhhhhhhhh
Confidence 555555 333445432 2789999999 6699999999999999999999999999853
Q ss_pred -------------------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHH
Q 003594 616 -------------------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQV 658 (808)
Q Consensus 616 -------------------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ 658 (808)
.+|+..+|+|++|+|+||.+-|+-||+.... ...+..+
T Consensus 196 s~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtp-----eelfg~v 270 (1205)
T KOG0606|consen 196 SLATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP-----EELFGQV 270 (1205)
T ss_pred hccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCH-----HHHHhhh
Confidence 3588999999999999999999999875311 1222222
Q ss_pred hccCCCCCC---hhhHHHHHHHHHHhhccCCCcCcccc
Q 003594 659 LDGNAGIWP---LDLAEELAGIALKCLSADQDANRDLR 693 (808)
Q Consensus 659 ld~~~~~~p---~~~~~~l~~Li~~Cl~~dp~p~~Rps 693 (808)
+ .....|| ...+.++++++.++|..+ |..|.-
T Consensus 271 i-sd~i~wpE~dea~p~Ea~dli~~LL~qn--p~~Rlg 305 (1205)
T KOG0606|consen 271 I-SDDIEWPEEDEALPPEAQDLIEQLLRQN--PLCRLG 305 (1205)
T ss_pred h-hhhccccccCcCCCHHHHHHHHHHHHhC--hHhhcc
Confidence 2 1222333 346789999999999999 777764
No 438
>PRK09982 universal stress protein UspD; Provisional
Probab=99.41 E-value=1e-12 Score=126.51 Aligned_cols=136 Identities=15% Similarity=0.130 Sum_probs=95.5
Q ss_pred CeEEEEecCCcccchhhHHHHhhhccCCCcEEEEEEEeccCCcCCcccCCCCCcCCCCCChHHHHHHHHHHHhhHHHHHH
Q 003594 6 PKVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHVTYNISIKDFVYTPFGKLPATSLSDEKLEILKKYEQGKTDNLLS 85 (808)
Q Consensus 6 ~~V~VAVd~s~~ss~~AL~WAl~n~~~~~~~ivLlHV~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 85 (808)
.+|+||||+|+.| ..||+||+.-....+..|+++||.++.+ ...+.+ .++ ..+ ...+..++..++.|.
T Consensus 4 k~ILvavD~S~~s-~~al~~A~~lA~~~~a~l~llhV~~~~~--~~~~~~--~~~----~~~---~~~~~~~~~~~~~l~ 71 (142)
T PRK09982 4 KHIGVAISGNEED-ALLVNKALELARHNDAHLTLIHIDDGLS--ELYPGI--YFP----ATE---DILQLLKNKSDNKLY 71 (142)
T ss_pred eEEEEEecCCcch-HHHHHHHHHHHHHhCCeEEEEEEccCcc--hhchhh--hcc----chH---HHHHHHHHHHHHHHH
Confidence 5799999999888 8899999987766788999999986542 011100 000 111 223334555567777
Q ss_pred HHHhhccCCCceEEEEEcCCccHHHHHHHHHHHhCCcEEEecccccCCCCCCccccCcccccccccCCCcceEEEEeC
Q 003594 86 KYLGFCGKVKAEILKVEKSDEPVHKLILDLVSRLTITKLVMGLSFMIPSAGKSRTAVSGSYFVHHHMPDYCELFIICG 163 (808)
Q Consensus 86 ~~~~~C~~~~v~~~~i~~~~~dv~~~I~e~i~~~~i~~LVmGs~~~g~~~~kr~~~~svs~yv~~~ap~~C~V~vv~k 163 (808)
++...+...++++... .|+|++.|++++++.++|.||||++ ++. +++.+ + ++..|+++++ |+|+||..
T Consensus 72 ~~~~~~~~~~~~~~v~---~G~p~~~I~~~A~~~~aDLIVmG~~-~~~--~~~~~-~-va~~V~~~s~--~pVLvv~~ 139 (142)
T PRK09982 72 KLTKNIQWPKTKLRIE---RGEMPETLLEIMQKEQCDLLVCGHH-HSF--INRLM-P-AYRGMINKMS--ADLLIVPF 139 (142)
T ss_pred HHHHhcCCCcceEEEE---ecCHHHHHHHHHHHcCCCEEEEeCC-hhH--HHHHH-H-HHHHHHhcCC--CCEEEecC
Confidence 7776655444444433 3799999999999999999999985 322 23334 4 9999999999 99999964
No 439
>PRK15118 universal stress global response regulator UspA; Provisional
Probab=99.40 E-value=7.3e-13 Score=127.55 Aligned_cols=136 Identities=13% Similarity=0.156 Sum_probs=90.5
Q ss_pred CeEEEEecCCcccchhhHHHHhhhccCCCcEEEEEEEeccCCcCCcccCCCCCcCCCCCChHHHHHHHHHHHhhHHHHHH
Q 003594 6 PKVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHVTYNISIKDFVYTPFGKLPATSLSDEKLEILKKYEQGKTDNLLS 85 (808)
Q Consensus 6 ~~V~VAVd~s~~ss~~AL~WAl~n~~~~~~~ivLlHV~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 85 (808)
++|+||||+|+.+ ..||.||++.....+..|+||||.++.+ . ... +..+ .....+.+...+...+.+.
T Consensus 4 ~~ILvavD~S~~s-~~al~~a~~la~~~~a~l~ll~v~~~~~---~-~~~-~~~~------~~~~~~~~~~~~~~~~~l~ 71 (144)
T PRK15118 4 KHILIAVDLSPES-KVLVEKAVSMARPYNAKVSLIHVDVNYS---D-LYT-GLID------VNLGDMQKRISEETHHALT 71 (144)
T ss_pred eEEEEEccCChhH-HHHHHHHHHHHHhhCCEEEEEEEccChh---h-hhh-hhhh------cchHHHHHHHHHHHHHHHH
Confidence 6899999999887 7899999987666677899999953321 0 000 1000 0011122222233334444
Q ss_pred HHHhhccCCCceEEEEEcCCccHHHHHHHHHHHhCCcEEEecccccCCCCCCccccCcccccccccCCCcceEEEEeC
Q 003594 86 KYLGFCGKVKAEILKVEKSDEPVHKLILDLVSRLTITKLVMGLSFMIPSAGKSRTAVSGSYFVHHHMPDYCELFIICG 163 (808)
Q Consensus 86 ~~~~~C~~~~v~~~~i~~~~~dv~~~I~e~i~~~~i~~LVmGs~~~g~~~~kr~~~~svs~yv~~~ap~~C~V~vv~k 163 (808)
.+. ...++.........|+|++.|+++|+++++|+||||++. .+ .+. +||++.+|+++++ |+|+||..
T Consensus 72 ~~~---~~~~~~~~~~~~~~G~p~~~I~~~a~~~~~DLIV~Gs~~--~~--~~~-lgSva~~v~~~a~--~pVLvv~~ 139 (144)
T PRK15118 72 ELS---TNAGYPITETLSGSGDLGQVLVDAIKKYDMDLVVCGHHQ--DF--WSK-LMSSARQLINTVH--VDMLIVPL 139 (144)
T ss_pred HHH---HhCCCCceEEEEEecCHHHHHHHHHHHhCCCEEEEeCcc--cH--HHH-HHHHHHHHHhhCC--CCEEEecC
Confidence 433 334554433333458999999999999999999999963 22 223 5799999999999 99999963
No 440
>cd01988 Na_H_Antiporter_C The C-terminal domain of a subfamily of Na+ /H+ antiporter existed in bacteria and archea . Na+/H+ exchange proteins eject protons from cells, effectively eliminating excess acid from actively metabolising cells. Na+ /H+ exchange activity is also crucial for the regulation of cell volume, and for the reabsorption of NaCl across renal, intestinal, and other epithelia. These antiports exchange Na+ for H+ in an electroneutral manner, and this activity is carried out by a family of Na+ /H+ exchangers, or NHEs, which are known to be present in both prokaryotic and eukaryotic cells. These exchangers are highly-regulated (glyco)phosphoproteins, which, based on their primary structure, appear to contain 10-12 membrane-spanning regions (M) at the N-terminus and a large cytoplasmic region at the C-terminus. The transmembrane regions M3-M12 share identity wit h other members of the family. The M6 and M7 regions are highly conserved. Thus, this is thought to be the regio
Probab=99.39 E-value=3e-12 Score=120.73 Aligned_cols=132 Identities=17% Similarity=0.165 Sum_probs=101.9
Q ss_pred eEEEEecCCcccchhhHHHHhhhccCCCcEEEEEEEeccCCcCCcccCCCCCcCCCCCChHHHHHHHHHHHhhHHHHHHH
Q 003594 7 KVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHVTYNISIKDFVYTPFGKLPATSLSDEKLEILKKYEQGKTDNLLSK 86 (808)
Q Consensus 7 ~V~VAVd~s~~ss~~AL~WAl~n~~~~~~~ivLlHV~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 86 (808)
+|+||||+++.+ ..+|.||..-....+..|+++||.++++ . ..+ .. .....+..++++..
T Consensus 1 ~ILv~vd~s~~~-~~~l~~a~~la~~~~~~v~ll~v~~~~~---~-~~~---------~~------~~~~~~~~~~~~~~ 60 (132)
T cd01988 1 RILVPVANPNTA-RDLLELAAALARAQNGEIIPLNVIEVPN---H-SSP---------SQ------LEVNVQRARKLLRQ 60 (132)
T ss_pred CEEEecCCchhH-HHHHHHHHHHhhcCCCeEEEEEEEecCC---C-CCc---------ch------hHHHHHHHHHHHHH
Confidence 589999999766 8899999887666677899999987643 0 000 00 11223446678888
Q ss_pred HHhhccCCCceEEEEEcCCccHHHHHHHHHHHhCCcEEEecccccCCCCCCccccCcccccccccCCCcceEEEEe
Q 003594 87 YLGFCGKVKAEILKVEKSDEPVHKLILDLVSRLTITKLVMGLSFMIPSAGKSRTAVSGSYFVHHHMPDYCELFIIC 162 (808)
Q Consensus 87 ~~~~C~~~~v~~~~i~~~~~dv~~~I~e~i~~~~i~~LVmGs~~~g~~~~kr~~~~svs~yv~~~ap~~C~V~vv~ 162 (808)
+...+...++++..+...++++.+.|++++.++++|.||||++.++ ..++.++||++++|.++++ |+|++|.
T Consensus 61 ~~~~~~~~g~~~~~~~~~~~~~~~~I~~~a~~~~~dlIV~G~~~~~--~~~~~~lGs~~~~v~~~~~--~pvlvv~ 132 (132)
T cd01988 61 AERIAASLGVPVHTIIRIDHDIASGILRTAKERQADLIIMGWHGST--SLRDRLFGGVIDQVLESAP--CDVAVVK 132 (132)
T ss_pred HHHHhhhcCCceEEEEEecCCHHHHHHHHHHhcCCCEEEEecCCCC--CccceecCchHHHHHhcCC--CCEEEeC
Confidence 8888877777777666556789999999999999999999995543 3356788999999999999 9999883
No 441
>PF00582 Usp: Universal stress protein family; InterPro: IPR006016 The universal stress protein UspA P28242 from SWISSPROT [] is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. UspA enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae UspA [] reveals an alpha/beta fold similar to that of the Methanocaldococcus jannaschii (Methanococcus jannaschii) MJ0577 protein, which binds ATP [], though UspA lacks ATP-binding activity.; GO: 0006950 response to stress; PDB: 3DLO_C 3QTB_A 2PFS_A 3TNJ_A 1JMV_D 3FH0_B 3FDX_B 3AB7_A 3AB8_A 2GM3_F ....
Probab=99.36 E-value=2e-12 Score=121.95 Aligned_cols=138 Identities=16% Similarity=0.161 Sum_probs=91.6
Q ss_pred CeEEEEecCCcccchhhHHHHhhhccCCCcEEEEEEEeccCCcCCcccCCCCCcCCCCCChHHHHHHHHHHHhhHHHHHH
Q 003594 6 PKVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHVTYNISIKDFVYTPFGKLPATSLSDEKLEILKKYEQGKTDNLLS 85 (808)
Q Consensus 6 ~~V~VAVd~s~~ss~~AL~WAl~n~~~~~~~ivLlHV~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 85 (808)
++|+||||+++.+ ..|++||+......+..|.+|||.++.. .... .... ................
T Consensus 3 ~~Ilv~~d~~~~~-~~al~~a~~la~~~~~~i~~l~v~~~~~-----~~~~--------~~~~-~~~~~~~~~~~~~~~~ 67 (140)
T PF00582_consen 3 KRILVAIDGSEES-RRALRFALELAKRSGAEITLLHVIPPPP-----QYSF--------SAAE-DEESEEEAEEEEQARQ 67 (140)
T ss_dssp SEEEEEESSSHHH-HHHHHHHHHHHHHHTCEEEEEEEEESCH-----CHHH--------HHHH-HHHHHHHHHHHHHHHH
T ss_pred CEEEEEECCCHHH-HHHHHHHHHHHHhhCCeEEEEEeecccc-----cccc--------cccc-ccccccccchhhhhhh
Confidence 5899999999877 7899999997777788999999997643 0000 0000 0000000000011111
Q ss_pred HHHhhccCCCceEEEEEcCCccHHHHHHHHHHHhCCcEEEecccccCCCCCCccccCcccccccccCCCcceEEEEe
Q 003594 86 KYLGFCGKVKAEILKVEKSDEPVHKLILDLVSRLTITKLVMGLSFMIPSAGKSRTAVSGSYFVHHHMPDYCELFIIC 162 (808)
Q Consensus 86 ~~~~~C~~~~v~~~~i~~~~~dv~~~I~e~i~~~~i~~LVmGs~~~g~~~~kr~~~~svs~yv~~~ap~~C~V~vv~ 162 (808)
.....+...+..........++++++|++++.++++|.||||++.++ ...+.+.|+++++|++++| |+|+||.
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~dliv~G~~~~~--~~~~~~~gs~~~~l~~~~~--~pVlvv~ 140 (140)
T PF00582_consen 68 AEAEEAEAEGGIVIEVVIESGDVADAIIEFAEEHNADLIVMGSRGRS--GLERLLFGSVAEKLLRHAP--CPVLVVP 140 (140)
T ss_dssp HHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHTTCSEEEEESSSTT--STTTSSSHHHHHHHHHHTS--SEEEEEE
T ss_pred HHHHHHhhhccceeEEEEEeeccchhhhhccccccceeEEEeccCCC--CccCCCcCCHHHHHHHcCC--CCEEEeC
Confidence 11133333333333333445899999999999999999999995533 3366788999999999999 9999984
No 442
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.35 E-value=8.9e-12 Score=141.76 Aligned_cols=133 Identities=19% Similarity=0.225 Sum_probs=94.7
Q ss_pred cccccCCceEEEEEEE-CCeEEEEEEccCCCCH------------------------------------------HHHHH
Q 003594 468 RLKCAGDWTNVYRGRL-NHASVAIKTLNNGLSE------------------------------------------EDFQA 504 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~-~~~~vAiK~l~~~~~~------------------------------------------~~~~~ 504 (808)
+-+|.|++|.||+|++ +|+.||||+.++.... -+|.+
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 3568999999999999 7999999998743210 02445
Q ss_pred HHHHHhccC-----CCCc--cceeeccccceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHH-Hh
Q 003594 505 KVSFLTAVR-----HPHL--VAVMGCCSELKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCL-GL 576 (808)
Q Consensus 505 Ei~il~~l~-----HpnI--v~l~g~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~-aL 576 (808)
|+..+.+++ ++++ .+++..+....+|||||++|++|.++.... ...++ +..++..++. .+
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~---------~~~~~---~~~ia~~~~~~~l 270 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALD---------EAGLD---RKALAENLARSFL 270 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHH---------hcCCC---HHHHHHHHHHHHH
Confidence 555555552 3332 233333344679999999999999887422 11122 3456666665 47
Q ss_pred hhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc
Q 003594 577 SFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC 615 (808)
Q Consensus 577 ~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~ 615 (808)
..+|. .|++|+|++|.||+++.++.++++|||++..
T Consensus 271 ~ql~~---~g~~H~D~hPgNilv~~~g~i~liDfG~~~~ 306 (437)
T TIGR01982 271 NQVLR---DGFFHADLHPGNIFVLKDGKIIALDFGIVGR 306 (437)
T ss_pred HHHHh---CCceeCCCCcccEEECCCCcEEEEeCCCeeE
Confidence 78898 5699999999999999999999999999854
No 443
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.34 E-value=4.2e-12 Score=125.31 Aligned_cols=141 Identities=13% Similarity=0.095 Sum_probs=105.3
Q ss_pred ccccCCceEEEEEEECCeEEEEEEccCCC-CHHHHHHHHHHHhccCCCCc-cceeeccccceEEEEeecCCCCHHHHHhh
Q 003594 469 LKCAGDWTNVYRGRLNHASVAIKTLNNGL-SEEDFQAKVSFLTAVRHPHL-VAVMGCCSELKCIVFEYMPNGNLRDKLFT 546 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~~~~~vAiK~l~~~~-~~~~~~~Ei~il~~l~HpnI-v~l~g~~~~~~~lV~Ey~~~gsL~~~l~~ 546 (808)
.+++|.++.||++...+..|++|...... ....+..|+.++..+.+.++ .+++++..+..++||||++|.++.+..
T Consensus 5 ~l~~G~~~~vy~~~~~~~~~~lK~~~~~~~~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~~~~lv~e~i~G~~l~~~~-- 82 (170)
T cd05151 5 PLKGGMTNKNYRVEVANKKYVVRIPGNGTELLINRENEAENSKLAAEAGIGPKLYYFDPETGVLITEFIEGSELLTED-- 82 (170)
T ss_pred ecCCcccCceEEEEECCeEEEEEeCCCCcccccCHHHHHHHHHHHHHhCCCCceEEEeCCCCeEEEEecCCCcccccc--
Confidence 34678899999999999999999987433 23457889999999865554 456666665678999999998775421
Q ss_pred ccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcC--CCCeEecCCCCCCcccCCCccEEEEeCCCcccCCCCcchhh
Q 003594 547 SQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTE--PRPIVHGSLTPSSILLDRNLVAKISGLGLNICDQLNVRSDI 624 (808)
Q Consensus 547 ~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~--~~~iiHrDLKp~NILld~~~~~kl~DfGla~~~~~t~ksDV 624 (808)
. ....++.+++.+|..||..+ +.+++|||++|.||+++ ++.++++|||.+... .+ .
T Consensus 83 -------------~---~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~~--~~---~ 140 (170)
T cd05151 83 -------------F---SDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGMN--DP---L 140 (170)
T ss_pred -------------c---cCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccCC--Ch---H
Confidence 0 01245789999999999965 33479999999999998 668999999998643 22 3
Q ss_pred HhHHHHHHH
Q 003594 625 RAFGTLLLH 633 (808)
Q Consensus 625 wS~Gvil~e 633 (808)
|-||.++.+
T Consensus 141 ~Dla~~~~~ 149 (170)
T cd05151 141 FDLANFFSE 149 (170)
T ss_pred HHHHHHHHh
Confidence 456666654
No 444
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.33 E-value=5.7e-13 Score=147.04 Aligned_cols=143 Identities=22% Similarity=0.263 Sum_probs=110.6
Q ss_pred ceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEE
Q 003594 527 LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAK 606 (808)
Q Consensus 527 ~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~k 606 (808)
++||.|++|.-.+|.++|.+. ......+|...+.++.|++.|+.| ++.+|+|+||.||++..+..+|
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr-------~~~e~~s~s~~~~~~~q~~~~~~y------k~~ihrdlkp~nif~~~d~q~k 396 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRR-------RTGEERSLSLMLDIFKQIAPAVEY------KGLIHRDLKPSNIFFSDDDQLK 396 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCC-------CcccccchhHHHHHHHhhccchhh------ccchhhhccccccccccchhhh
Confidence 578999999999999999654 345667889999999999999999 4699999999999999999999
Q ss_pred EEeCCCccc-------------------------------CCCCcchhhHhHHHHHHHHHcC-CCCchhhHHHhhhcHHH
Q 003594 607 ISGLGLNIC-------------------------------DQLNVRSDIRAFGTLLLHLLTG-RNWAGLVEKAMALDQTT 654 (808)
Q Consensus 607 l~DfGla~~-------------------------------~~~t~ksDVwS~Gvil~elltG-~~P~~~~~~~~~~~~~~ 654 (808)
|+|||+... ..|+.++||||||+||+||++- ..+|. ....
T Consensus 397 IgDFgl~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~e--------r~~t 468 (516)
T KOG1033|consen 397 IGDFGLVTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFE--------RIAT 468 (516)
T ss_pred hhhhhheeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHH--------HHHh
Confidence 999998632 3588999999999999999982 22221 1223
Q ss_pred HHHHhccCCCCCChh---hHHHHHHHHHHhhccCCCcCccccHH
Q 003594 655 LMQVLDGNAGIWPLD---LAEELAGIALKCLSADQDANRDLRIA 695 (808)
Q Consensus 655 ~~~~ld~~~~~~p~~---~~~~l~~Li~~Cl~~dp~p~~Rps~~ 695 (808)
+.++-+ +.||+. --+.-..|+.+++.+. |..||++.
T Consensus 469 ~~d~r~---g~ip~~~~~d~p~e~~ll~~lls~~--p~~RP~~~ 507 (516)
T KOG1033|consen 469 LTDIRD---GIIPPEFLQDYPEEYTLLQQLLSPS--PEERPSAI 507 (516)
T ss_pred hhhhhc---CCCChHHhhcCcHHHHHHHHhcCCC--cccCchHH
Confidence 333333 334422 1234568999999988 99999543
No 445
>PRK10116 universal stress protein UspC; Provisional
Probab=99.21 E-value=7.9e-11 Score=112.98 Aligned_cols=135 Identities=14% Similarity=0.137 Sum_probs=92.7
Q ss_pred CeEEEEecCCcccchhhHHHHhhhccCCCcEEEEEEEeccCCcCCcccCCCCCcCCCCCChHHHHHHHHHHHhhHHHHHH
Q 003594 6 PKVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHVTYNISIKDFVYTPFGKLPATSLSDEKLEILKKYEQGKTDNLLS 85 (808)
Q Consensus 6 ~~V~VAVd~s~~ss~~AL~WAl~n~~~~~~~ivLlHV~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 85 (808)
.+|+||||.|..+ ..||.+|+.-....+..|.++||.++++ .+. .......+.+.+...+..++.|.
T Consensus 4 ~~ILv~~D~s~~s-~~al~~A~~lA~~~~a~l~ll~v~~~~~----~~~--------~~~~~~~~~~~~~~~~~~~~~l~ 70 (142)
T PRK10116 4 SNILVAVAVTPES-QQLLAKAVSIARPVNGKISLITLASDPE----MYN--------QFAAPMLEDLRSVMQEETQSFLD 70 (142)
T ss_pred ceEEEEccCCcch-HHHHHHHHHHHHHhCCEEEEEEEccCcc----cch--------hhhHHHHHHHHHHHHHHHHHHHH
Confidence 6899999999877 7799999886655577899999976532 110 01111222333444444555555
Q ss_pred HHHhhccCCCceEEEEEcCCccHHHHHHHHHHHhCCcEEEecccccCCCCCCccccCcccccccccCCCcceEEEEe
Q 003594 86 KYLGFCGKVKAEILKVEKSDEPVHKLILDLVSRLTITKLVMGLSFMIPSAGKSRTAVSGSYFVHHHMPDYCELFIIC 162 (808)
Q Consensus 86 ~~~~~C~~~~v~~~~i~~~~~dv~~~I~e~i~~~~i~~LVmGs~~~g~~~~kr~~~~svs~yv~~~ap~~C~V~vv~ 162 (808)
.+. ...+++...+.+..+++.+.|++++.+.++|+||||++.++ .+.+. +|++.+|+++++ |+|+||.
T Consensus 71 ~~~---~~~~~~~~~~~~~~G~~~~~I~~~a~~~~~DLiV~g~~~~~--~~~~~--~s~a~~v~~~~~--~pVLvv~ 138 (142)
T PRK10116 71 KLI---QDADYPIEKTFIAYGELSEHILEVCRKHHFDLVICGNHNHS--FFSRA--SCSAKRVIASSE--VDVLLVP 138 (142)
T ss_pred HHH---HhcCCCeEEEEEecCCHHHHHHHHHHHhCCCEEEEcCCcch--HHHHH--HHHHHHHHhcCC--CCEEEEe
Confidence 543 34455443333445899999999999999999999995432 22332 378899999999 9999995
No 446
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.18 E-value=4.3e-10 Score=129.70 Aligned_cols=157 Identities=15% Similarity=0.149 Sum_probs=99.5
Q ss_pred cccccccccccCCceEEEEEEE-C-CeEEEEEEccCCCC----------------------------H------------
Q 003594 462 DFSERFRLKCAGDWTNVYRGRL-N-HASVAIKTLNNGLS----------------------------E------------ 499 (808)
Q Consensus 462 ~f~~~~~i~g~G~~g~Vy~~~~-~-~~~vAiK~l~~~~~----------------------------~------------ 499 (808)
+|+. +-+|.|++|.||+|++ + |+.||||++++... .
T Consensus 121 ~fd~--~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l~ 198 (537)
T PRK04750 121 DFDI--KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTLH 198 (537)
T ss_pred hcCh--hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHH
Confidence 4554 4568999999999998 4 89999999974310 0
Q ss_pred --HHHHHHHHHHhccC----CCCccceeecc---ccceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHH
Q 003594 500 --EDFQAKVSFLTAVR----HPHLVAVMGCC---SELKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAH 570 (808)
Q Consensus 500 --~~~~~Ei~il~~l~----HpnIv~l~g~~---~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~ 570 (808)
-+|.+|+..+.+++ +.+.+.+-.++ ....+|||||++|++|.++-.-.... .....+.......++.
T Consensus 199 ~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g----~d~~~la~~~v~~~~~ 274 (537)
T PRK04750 199 DELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAG----TDMKLLAERGVEVFFT 274 (537)
T ss_pred HhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcC----CCHHHHHHHHHHHHHH
Confidence 12445555555552 33333322222 34678999999999998753211000 0112244444444455
Q ss_pred HHHHHhhhhhhcCCCCeEecCCCCCCcccCCCc----cEEEEeCCCcccCCCCcchhhHhHHHHHHHHHcC
Q 003594 571 EVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNL----VAKISGLGLNICDQLNVRSDIRAFGTLLLHLLTG 637 (808)
Q Consensus 571 qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~----~~kl~DfGla~~~~~t~ksDVwS~Gvil~elltG 637 (808)
|+. . .|++|+|+||.||+++.++ .++++|||+...- ...|-..|.-+++.++.+
T Consensus 275 Qif-------~---~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l---~~~~r~~l~~~~~a~~~~ 332 (537)
T PRK04750 275 QVF-------R---DGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSL---NKEDKRYLAENFLAFFNR 332 (537)
T ss_pred HHH-------h---CCeeeCCCChHHeEEecCCCCCCeEEEEecceEEEC---CHHHHHHHHHHHHHHHhc
Confidence 554 3 4599999999999999888 9999999998532 344555565555555554
No 447
>PRK11175 universal stress protein UspE; Provisional
Probab=99.18 E-value=1.4e-10 Score=126.28 Aligned_cols=144 Identities=11% Similarity=0.044 Sum_probs=103.1
Q ss_pred CeEEEEecCCcccchhhHHHHhhhccCCCcEEEEEEEeccCCcCCcccCCCCCcCCCCCChHHHHHHHHHHHhhHHHHHH
Q 003594 6 PKVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHVTYNISIKDFVYTPFGKLPATSLSDEKLEILKKYEQGKTDNLLS 85 (808)
Q Consensus 6 ~~V~VAVd~s~~ss~~AL~WAl~n~~~~~~~ivLlHV~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~ 85 (808)
.+|+||+|.|+.+ ..||.||+.-....+..|+++||.++.+ .+.+ +. .........++...+..++.|+
T Consensus 4 ~~ILv~~D~s~~~-~~al~~a~~lA~~~~a~l~ll~v~~~~~----~~~~-~~-----~~~~~~~~~~~~~~~~~~~~l~ 72 (305)
T PRK11175 4 QNILVVIDPNQDD-QPALRRAVYLAQRNGGKITAFLPIYDFS----YEMT-TL-----LSPDEREAMRQGVISQRTAWIR 72 (305)
T ss_pred ceEEEEcCCCccc-cHHHHHHHHHHHhcCCCEEEEEeccCch----hhhh-cc-----cchhHHHHHHHHHHHHHHHHHH
Confidence 5799999999887 7799999986555566899999976532 1111 11 1111211222333334566677
Q ss_pred HHHhhccCCCceEEEEEcCCccHHHHHHHHHHHhCCcEEEecccccCCCCCCccccCcccccccccCCCcceEEEEeCC
Q 003594 86 KYLGFCGKVKAEILKVEKSDEPVHKLILDLVSRLTITKLVMGLSFMIPSAGKSRTAVSGSYFVHHHMPDYCELFIICGG 164 (808)
Q Consensus 86 ~~~~~C~~~~v~~~~i~~~~~dv~~~I~e~i~~~~i~~LVmGs~~~g~~~~kr~~~~svs~yv~~~ap~~C~V~vv~kg 164 (808)
.+...+...++.+.......+++.++|++++.++++|.||||+++ ...+.+.+.||++..+++++| |||++|..+
T Consensus 73 ~~~~~~~~~~~~~~~~v~~~g~~~~~i~~~a~~~~~DLiV~G~~~--~~~~~~~~~gs~~~~l~~~~~--~pvlvv~~~ 147 (305)
T PRK11175 73 EQAKPYLDAGIPIEIKVVWHNRPFEAIIQEVIAGGHDLVVKMTHQ--HDKLESVIFTPTDWHLLRKCP--CPVLMVKDQ 147 (305)
T ss_pred HHHHHHhhcCCceEEEEecCCCcHHHHHHHHHhcCCCEEEEeCCC--CcHHHhhccChhHHHHHhcCC--CCEEEeccc
Confidence 777777666666665444457999999999999999999999954 344467788999999999999 999999754
No 448
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.15 E-value=5.1e-11 Score=124.06 Aligned_cols=177 Identities=23% Similarity=0.281 Sum_probs=126.7
Q ss_pred HHHHHhccCCCCccceeecccc-------ceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhh
Q 003594 505 KVSFLTAVRHPHLVAVMGCCSE-------LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLS 577 (808)
Q Consensus 505 Ei~il~~l~HpnIv~l~g~~~~-------~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~ 577 (808)
=..-|-.+.|-|||+++.|+.+ ...++.|||..|+|..+|++.. .....+......+++-||++||.
T Consensus 117 vFdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~------~~~~a~~~~~wkkw~tqIlsal~ 190 (458)
T KOG1266|consen 117 VFDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTK------KNQKALFQKAWKKWCTQILSALS 190 (458)
T ss_pred HHHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHH------HhhhhhhHHHHHHHHHHHHhhhh
Confidence 3445667789999999999965 3468999999999999998764 34556777777899999999999
Q ss_pred hhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc-----------------------------CCCCcchhhHhHH
Q 003594 578 FLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-----------------------------DQLNVRSDIRAFG 628 (808)
Q Consensus 578 yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~-----------------------------~~~t~ksDVwS~G 628 (808)
|||+.. .+|+|+++...-|++..+|-+||+----... ...+..+|||+||
T Consensus 191 yLhs~~-PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fg 269 (458)
T KOG1266|consen 191 YLHSCD-PPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFG 269 (458)
T ss_pred hhhccC-CccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhh
Confidence 999988 7899999999999999999998853221100 2345789999999
Q ss_pred HHHHHHHcCCCC-chhhHHHhhhcHHHHHHHhccCCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHH
Q 003594 629 TLLLHLLTGRNW-AGLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 629 vil~elltG~~P-~~~~~~~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~ 699 (808)
...++|..|.-- ....... .........+-+.. ...-..++.+|++.. |..||+|.+++.
T Consensus 270 mcAlemailEiq~tnseS~~--~~ee~ia~~i~~le-------n~lqr~~i~kcl~~e--P~~rp~ar~llf 330 (458)
T KOG1266|consen 270 MCALEMAILEIQSTNSESKV--EVEENIANVIIGLE-------NGLQRGSITKCLEGE--PNGRPDARLLLF 330 (458)
T ss_pred HHHHHHHHheeccCCCccee--ehhhhhhhheeecc-------CccccCcCcccccCC--CCCCcchhhhhc
Confidence 999999887532 1110000 11122222221111 112245788999988 999999998874
No 449
>smart00504 Ubox Modified RING finger domain. Modified RING finger domain, without the full complement of Zn2+-binding ligands. Probable involvement in E2-dependent ubiquitination.
Probab=99.13 E-value=4.3e-11 Score=98.17 Aligned_cols=63 Identities=49% Similarity=0.844 Sum_probs=60.3
Q ss_pred cccccccccccCCCcccCCCcchhhHHHHHHHcCCCCCCCCCCCCCCCCCCCccHHHHHHHHHH
Q 003594 736 VFICPIFQEVMKTPHVAADGFSYELEAMEEWLGMGHDTSPMTNLRLKHKYLTPNHTLRSLIQEW 799 (808)
Q Consensus 736 ~f~cPI~~evm~dP~v~~dg~tye~~ai~~wl~~~~~tsP~t~~~l~~~~l~pN~~l~~~i~~~ 799 (808)
.+.|||+.++|.+|++++.|++|++++|..|+.. +.++|+|+.++....++||+.||++|++|
T Consensus 1 ~~~Cpi~~~~~~~Pv~~~~G~v~~~~~i~~~~~~-~~~cP~~~~~~~~~~l~~~~~l~~~i~~~ 63 (63)
T smart00504 1 EFLCPISLEVMKDPVILPSGQTYERRAIEKWLLS-HGTDPVTGQPLTHEDLIPNLALKSAIQEW 63 (63)
T ss_pred CcCCcCCCCcCCCCEECCCCCEEeHHHHHHHHHH-CCCCCCCcCCCChhhceeCHHHHHHHHhC
Confidence 4789999999999999999999999999999986 78999999999999999999999999998
No 450
>cd00293 USP_Like Usp: Universal stress protein family. The universal stress protein Usp is a small cytoplasmic bacterial protein whose expression is enhanced when the cell is exposed to stress agents. Usp enhances the rate of cell survival during prolonged exposure to such conditions, and may provide a general "stress endurance" activity. The crystal structure of Haemophilus influenzae Usp reveals an alpha/beta fold similar to that of the Methanococcus jannaschii MJ0577 protein, which binds ATP, athough Usp lacks ATP-binding activity.
Probab=99.12 E-value=5.6e-10 Score=103.89 Aligned_cols=130 Identities=20% Similarity=0.233 Sum_probs=100.6
Q ss_pred eEEEEecCCcccchhhHHHHhhhccCCCcEEEEEEEeccCCcCCcccCCCCCcCCCCCChHHHHHHHHHHHhhHHHHHHH
Q 003594 7 KVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHVTYNISIKDFVYTPFGKLPATSLSDEKLEILKKYEQGKTDNLLSK 86 (808)
Q Consensus 7 ~V~VAVd~s~~ss~~AL~WAl~n~~~~~~~ivLlHV~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll~~ 86 (808)
+|+||+|.+..+ ..+++||++.....+..|.++||.++.. ..+ . ........+.++.|..
T Consensus 1 ~ilv~i~~~~~~-~~~l~~a~~~a~~~~~~i~~l~v~~~~~-----~~~-------~-------~~~~~~~~~~~~~l~~ 60 (130)
T cd00293 1 RILVAVDGSEES-ERALRWAARLARRLGAELVLLHVVDPPP-----SSA-------A-------ELAELLEEEARALLEA 60 (130)
T ss_pred CEEEEeCCCHHH-HHHHHHHHHHHHhcCCEEEEEEEecCCC-----Ccc-------h-------hHHHHHHHHHHHHHHH
Confidence 589999998766 7899999998887788999999986532 000 0 2223345556789999
Q ss_pred HHhhccCCCceEEEEEcCCccHHHHHHHHHHHhCCcEEEecccccCCCCCCccccCcccccccccCCCcceEEEE
Q 003594 87 YLGFCGKVKAEILKVEKSDEPVHKLILDLVSRLTITKLVMGLSFMIPSAGKSRTAVSGSYFVHHHMPDYCELFII 161 (808)
Q Consensus 87 ~~~~C~~~~v~~~~i~~~~~dv~~~I~e~i~~~~i~~LVmGs~~~g~~~~kr~~~~svs~yv~~~ap~~C~V~vv 161 (808)
|...|...++.+...... ++++++|++++.+++++.||||++.++.+ .+.+.++.+.++.++++ |+|++|
T Consensus 61 ~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~dlvvig~~~~~~~--~~~~~~~~~~~ll~~~~--~pvliv 130 (130)
T cd00293 61 LREALAEAGVKVETVVLE-GDPAEAILEAAEELGADLIVMGSRGRSGL--RRLLLGSVAERVLRHAP--CPVLVV 130 (130)
T ss_pred HHHHHhcCCCceEEEEec-CCCHHHHHHHHHHcCCCEEEEcCCCCCcc--ceeeeccHHHHHHhCCC--CCEEeC
Confidence 999887667776655543 56799999999999999999999554433 56678999999999988 999975
No 451
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.12 E-value=5.5e-10 Score=109.08 Aligned_cols=136 Identities=24% Similarity=0.262 Sum_probs=103.6
Q ss_pred ccccCCceEEEEEEECCeEEEEEEcc-CCCC---------HHHHHHHHHHHhccCC--CCccceeeccccceEEEEeecC
Q 003594 469 LKCAGDWTNVYRGRLNHASVAIKTLN-NGLS---------EEDFQAKVSFLTAVRH--PHLVAVMGCCSELKCIVFEYMP 536 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~~~~~vAiK~l~-~~~~---------~~~~~~Ei~il~~l~H--pnIv~l~g~~~~~~~lV~Ey~~ 536 (808)
++++|+-+.+|.+.+-|.++++|.=. +..- ...-.+|+.++.+++- -+...++.+.++...|+|||++
T Consensus 3 ~i~~GAEa~i~~~~~~g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~I~ 82 (204)
T COG3642 3 LIKQGAEAIIYLTDFLGLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEYIE 82 (204)
T ss_pred hhhCCcceeEEeeeccCcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEEeC
Confidence 46789999999999888787777633 2111 2356789999998853 4455667777778899999999
Q ss_pred CCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCcccC
Q 003594 537 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNICD 616 (808)
Q Consensus 537 ~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~~ 616 (808)
|..|.+.+.. . ...++..|-.-+.-||.++ |+|+||.++||++.... +.++|||++...
T Consensus 83 G~~lkd~l~~----------~-------~~~~~r~vG~~vg~lH~~g---ivHGDLTtsNiIl~~~~-i~~IDfGLg~~s 141 (204)
T COG3642 83 GELLKDALEE----------A-------RPDLLREVGRLVGKLHKAG---IVHGDLTTSNIILSGGR-IYFIDFGLGEFS 141 (204)
T ss_pred ChhHHHHHHh----------c-------chHHHHHHHHHHHHHHhcC---eecCCCccceEEEeCCc-EEEEECCccccc
Confidence 9999989832 1 2567888888889999954 99999999999997664 999999998752
Q ss_pred C--CCcchhhH
Q 003594 617 Q--LNVRSDIR 625 (808)
Q Consensus 617 ~--~t~ksDVw 625 (808)
. -...+|+|
T Consensus 142 ~~~Ed~aVDl~ 152 (204)
T COG3642 142 DEVEDKAVDLH 152 (204)
T ss_pred ccHHhhhchHH
Confidence 2 24556766
No 452
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=99.10 E-value=1e-09 Score=121.00 Aligned_cols=207 Identities=19% Similarity=0.207 Sum_probs=147.4
Q ss_pred eEEEEEEE--CCeEEEEEEccC--CCCHHHHHHHHHHHhccCCCCccceeecccc------ceEEEEeecCC-CCHHHHH
Q 003594 476 TNVYRGRL--NHASVAIKTLNN--GLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE------LKCIVFEYMPN-GNLRDKL 544 (808)
Q Consensus 476 g~Vy~~~~--~~~~vAiK~l~~--~~~~~~~~~Ei~il~~l~HpnIv~l~g~~~~------~~~lV~Ey~~~-gsL~~~l 544 (808)
.+.|++.. +|..|++|+++. .........-+++++++.|+|+|++..+|.. .+++||+|.|+ ++|.++.
T Consensus 290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~ 369 (655)
T KOG3741|consen 290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLY 369 (655)
T ss_pred ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHH
Confidence 56799987 799999999962 2223334456889999999999999988752 67999999997 6899887
Q ss_pred hhccccc-----cccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCcccCCCC
Q 003594 545 FTSQRNY-----KNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNICDQLN 619 (808)
Q Consensus 545 ~~~~~~~-----~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~~~~t 619 (808)
+...... ........+++...|.|+.|+..||.++|+. |+.-+-|.|.+||++.+.+++|+..|+...-..+
T Consensus 370 F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHss---GLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~d 446 (655)
T KOG3741|consen 370 FANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSS---GLACKTLDLKKILVTGKMRIRISGCGIMDVLQED 446 (655)
T ss_pred ccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhc---CceeecccHhHeEeeCcceEEEecccceeeecCC
Confidence 7543221 1123445678999999999999999999995 4888999999999999999999988887552222
Q ss_pred --------cchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHH-HHHHhccCCCCCChhhHHHHHHHHHHhhccCCCcCc
Q 003594 620 --------VRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTT-LMQVLDGNAGIWPLDLAEELAGIALKCLSADQDANR 690 (808)
Q Consensus 620 --------~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~-~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~ 690 (808)
.+-|.=.||.+++-|.||..--...+ ..+.. +.. +-..++.++.+++.-....+ ++.
T Consensus 447 ~~~~le~~Qq~D~~~lG~ll~aLAt~~~ns~~~d----~~~~s~~~~--------I~~~yS~D~rn~v~yl~s~~--~~~ 512 (655)
T KOG3741|consen 447 PTEPLESQQQNDLRDLGLLLLALATGTENSNRTD----STQSSHLTR--------ITTTYSTDLRNVVEYLESLN--FRE 512 (655)
T ss_pred CCcchhHHhhhhHHHHHHHHHHHhhccccccccc----chHHHHHHH--------hhhhhhHHHHHHHHHHHhcC--ccc
Confidence 36799999999999999963210000 01111 111 12245667777777777766 443
Q ss_pred cccHHhhHHH
Q 003594 691 DLRIAGVMKE 700 (808)
Q Consensus 691 Rps~~evl~~ 700 (808)
-++.+++.+
T Consensus 513 -ksI~~llp~ 521 (655)
T KOG3741|consen 513 -KSIQDLLPM 521 (655)
T ss_pred -ccHHHHHHH
Confidence 445555543
No 453
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.09 E-value=6.3e-10 Score=114.45 Aligned_cols=137 Identities=21% Similarity=0.260 Sum_probs=106.5
Q ss_pred cccccCCceEEEEEEECC-eEEEEEEccCCC---CHHHHHHHHHHHhccCC--CCccceeecccc-----ceEEEEeecC
Q 003594 468 RLKCAGDWTNVYRGRLNH-ASVAIKTLNNGL---SEEDFQAKVSFLTAVRH--PHLVAVMGCCSE-----LKCIVFEYMP 536 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~~~-~~vAiK~l~~~~---~~~~~~~Ei~il~~l~H--pnIv~l~g~~~~-----~~~lV~Ey~~ 536 (808)
+.+++|.++.||++...+ ..+++|...... ....+.+|+.++..+.+ .++.+++.++.+ ..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 345678899999999865 899999987432 35678999999999975 446778887765 4589999999
Q ss_pred CCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcC---------------------------------
Q 003594 537 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTE--------------------------------- 583 (808)
Q Consensus 537 ~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~--------------------------------- 583 (808)
|++|.+.+. ...++......++.+++.+|.+||+..
T Consensus 84 G~~l~~~~~-----------~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (223)
T cd05154 84 GRVLRDRLL-----------RPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTD 152 (223)
T ss_pred CEecCCCCC-----------CCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhccc
Confidence 988876551 134667777777888888888887521
Q ss_pred --------------------CCCeEecCCCCCCcccCC--CccEEEEeCCCccc
Q 003594 584 --------------------PRPIVHGSLTPSSILLDR--NLVAKISGLGLNIC 615 (808)
Q Consensus 584 --------------------~~~iiHrDLKp~NILld~--~~~~kl~DfGla~~ 615 (808)
+..++|+|+.|.|||++. ++.+.|+||+.+..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 153 EPPAMERLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred ccHHHHHHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 356899999999999998 67789999998854
No 454
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.08 E-value=4.3e-10 Score=109.15 Aligned_cols=150 Identities=19% Similarity=0.240 Sum_probs=108.0
Q ss_pred cccccccCCceEEEEEEECCeEEEEEEcc-CC---------CCHHHHHHHHHHHhccCCCCccceeecc--ccceEEEEe
Q 003594 466 RFRLKCAGDWTNVYRGRLNHASVAIKTLN-NG---------LSEEDFQAKVSFLTAVRHPHLVAVMGCC--SELKCIVFE 533 (808)
Q Consensus 466 ~~~i~g~G~~g~Vy~~~~~~~~vAiK~l~-~~---------~~~~~~~~Ei~il~~l~HpnIv~l~g~~--~~~~~lV~E 533 (808)
...++.+|+-+.|+++.+.|+...||.-. .. ....+..+|+.+|.+++--.|.--.-++ ....+|+||
T Consensus 11 ~l~likQGAEArv~~~~~~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~ME 90 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFSGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYME 90 (229)
T ss_pred cceeeeccceeeEeeeccCCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEEE
Confidence 45677899999999999999998888643 11 1235678899999998644433222222 336789999
Q ss_pred ecCC-CCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCC---ccEEEEe
Q 003594 534 YMPN-GNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRN---LVAKISG 609 (808)
Q Consensus 534 y~~~-gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~---~~~kl~D 609 (808)
|++| .++.+++... ......-.....++..|-..|.-||.+. ||||||..+||+|..+ ..+.++|
T Consensus 91 ~~~g~~~vk~~i~~~--------~~~~~~d~~~~~~~~~iG~~igklH~nd---iiHGDLTTSNill~~~~~~~~~~lId 159 (229)
T KOG3087|consen 91 FIDGASTVKDFILST--------MEDESEDEGLAELARRIGELIGKLHDND---IIHGDLTTSNILLRSDGNQITPILID 159 (229)
T ss_pred eccchhHHHHHHHHH--------ccCcccchhHHHHHHHHHHHHHHhhhCC---eecccccccceEEecCCCcCceEEEe
Confidence 9986 4888888654 1222222333678899999999999955 9999999999999654 3568999
Q ss_pred CCCcccCC--CCcchhhHh
Q 003594 610 LGLNICDQ--LNVRSDIRA 626 (808)
Q Consensus 610 fGla~~~~--~t~ksDVwS 626 (808)
||++.... -+..+|+|=
T Consensus 160 fgls~~s~~~EDKgVDLYV 178 (229)
T KOG3087|consen 160 FGLSSVSRLPEDKGVDLYV 178 (229)
T ss_pred ecchhcccCcccccceeee
Confidence 99986632 345678773
No 455
>PRK11175 universal stress protein UspE; Provisional
Probab=99.08 E-value=6.7e-10 Score=120.85 Aligned_cols=142 Identities=13% Similarity=0.105 Sum_probs=92.8
Q ss_pred CCeEEEEecCCcccc------hhhHHHHhhhccCC-CcEEEEEEEeccCCcCCcccCCCCCcCCCCCChHHHHHHHHHHH
Q 003594 5 EPKVYVAVGNDLQDG------YRTLDWTIRKWKAQ-SISIVILHVTYNISIKDFVYTPFGKLPATSLSDEKLEILKKYEQ 77 (808)
Q Consensus 5 ~~~V~VAVd~s~~ss------~~AL~WAl~n~~~~-~~~ivLlHV~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~ 77 (808)
..+|+||+|.+..++ ..||++|++-...- +..|.||||.+..+ .. .....+ ..... .+.+..+
T Consensus 152 ~~~Ilva~D~s~~~~~~~~~~~~al~~a~~la~~~~~a~l~ll~v~~~~~----~~-~~~~~~--~~~~~---~~~~~~~ 221 (305)
T PRK11175 152 GGKILVAVNVASEEPYHDALNEKLVEEAIDLAEQLNHAEVHLVNAYPVTP----IN-IAIELP--EFDPS---VYNDAIR 221 (305)
T ss_pred CCeEEEEeCCCCCccchhHHHHHHHHHHHHHHhhCcCCceEEEEEecCcc----hh-cccccc--ccchh---hHHHHHH
Confidence 368999999987643 46899998654433 66799999986532 00 000111 11111 1222223
Q ss_pred hhHHHHHHHHHhhccCCCceEEEEEcCCccHHHHHHHHHHHhCCcEEEecccccCCCCCCccccCcccccccccCCCcce
Q 003594 78 GKTDNLLSKYLGFCGKVKAEILKVEKSDEPVHKLILDLVSRLTITKLVMGLSFMIPSAGKSRTAVSGSYFVHHHMPDYCE 157 (808)
Q Consensus 78 ~~~~~ll~~~~~~C~~~~v~~~~i~~~~~dv~~~I~e~i~~~~i~~LVmGs~~~g~~~~kr~~~~svs~yv~~~ap~~C~ 157 (808)
+...+.+..+...+ ++....+.+..++++++|++++++.++|.||||+++ ++.+.+.+.||++.+|++++| |+
T Consensus 222 ~~~~~~l~~~~~~~---~~~~~~~~v~~G~~~~~I~~~a~~~~~DLIVmG~~~--~~~~~~~llGS~a~~v~~~~~--~p 294 (305)
T PRK11175 222 GQHLLAMKALRQKF---GIDEEQTHVEEGLPEEVIPDLAEHLDAELVILGTVG--RTGLSAAFLGNTAEHVIDHLN--CD 294 (305)
T ss_pred HHHHHHHHHHHHHh---CCChhheeeccCCHHHHHHHHHHHhCCCEEEECCCc--cCCCcceeecchHHHHHhcCC--CC
Confidence 33344455554443 332222222347999999999999999999999954 444478899999999999999 99
Q ss_pred EEEEeC
Q 003594 158 LFIICG 163 (808)
Q Consensus 158 V~vv~k 163 (808)
|++|+.
T Consensus 295 VLvv~~ 300 (305)
T PRK11175 295 LLAIKP 300 (305)
T ss_pred EEEEcC
Confidence 999964
No 456
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.06 E-value=9.5e-10 Score=110.88 Aligned_cols=131 Identities=12% Similarity=0.110 Sum_probs=94.5
Q ss_pred ccccCCceEEEEEEEC--------CeEEEEEEccCCC-----------------------C-HHHHH----HHHHHHhcc
Q 003594 469 LKCAGDWTNVYRGRLN--------HASVAIKTLNNGL-----------------------S-EEDFQ----AKVSFLTAV 512 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~~--------~~~vAiK~l~~~~-----------------------~-~~~~~----~Ei~il~~l 512 (808)
.+|.|--+.||.|... +..+|||+.+... + ...+. +|+..|.++
T Consensus 4 ~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~rl 83 (197)
T cd05146 4 CISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKRM 83 (197)
T ss_pred ccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHHH
Confidence 4678888999999863 3789999876110 0 11233 799999998
Q ss_pred CC--CCccceeeccccceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhh-hhcCCCCeEe
Q 003594 513 RH--PHLVAVMGCCSELKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFL-HSTEPRPIVH 589 (808)
Q Consensus 513 ~H--pnIv~l~g~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yL-H~~~~~~iiH 589 (808)
.. -++.+.+++ ...+|||||+.++.+..... ....++......+..+++.+|..| |. .+|||
T Consensus 84 ~~~Gv~vP~pi~~--~~~~lvME~Ig~~~~~~~~L----------kd~~~~~~~~~~i~~~i~~~l~~l~H~---~glVH 148 (197)
T cd05146 84 QKAGIPCPEVVVL--KKHVLVMSFIGDDQVPAPKL----------KDAKLNDEEMKNAYYQVLSMMKQLYKE---CNLVH 148 (197)
T ss_pred HHcCCCCCeEEEe--cCCEEEEEEcCCCCccchhh----------hccccCHHHHHHHHHHHHHHHHHHHHh---CCeec
Confidence 53 456666654 56789999997654422110 112345556677889999999999 78 45999
Q ss_pred cCCCCCCcccCCCccEEEEeCCCccc
Q 003594 590 GSLTPSSILLDRNLVAKISGLGLNIC 615 (808)
Q Consensus 590 rDLKp~NILld~~~~~kl~DfGla~~ 615 (808)
|||+|.|||++ ++.++|+|||.+..
T Consensus 149 GDLs~~NIL~~-~~~v~iIDF~qav~ 173 (197)
T cd05146 149 ADLSEYNMLWH-DGKVWFIDVSQSVE 173 (197)
T ss_pred CCCCHHHEEEE-CCcEEEEECCCcee
Confidence 99999999996 46899999998754
No 457
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.05 E-value=1.3e-11 Score=144.75 Aligned_cols=212 Identities=18% Similarity=0.211 Sum_probs=156.6
Q ss_pred cccCCceEEEEEEE---CCeEEEEEEccCC-CC---HHHHHHHHHHHhccC-CCCccceeecccc--ceEEEEeecCCCC
Q 003594 470 KCAGDWTNVYRGRL---NHASVAIKTLNNG-LS---EEDFQAKVSFLTAVR-HPHLVAVMGCCSE--LKCIVFEYMPNGN 539 (808)
Q Consensus 470 ~g~G~~g~Vy~~~~---~~~~vAiK~l~~~-~~---~~~~~~Ei~il~~l~-HpnIv~l~g~~~~--~~~lV~Ey~~~gs 539 (808)
+|.|+|+.|-.... ....+|.|.+... .. ......|..+-..+. |+|++.+++...+ ..+++++|..||+
T Consensus 28 ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~~~s~g~~ 107 (601)
T KOG0590|consen 28 IGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSLSYSDGGS 107 (601)
T ss_pred ccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCcccccccCcccccc
Confidence 57999999988776 2356777777622 12 244455888878886 9999999999865 7789999999999
Q ss_pred HHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhh-hcCCCCeEecCCCCCCcccCCCc-cEEEEeCCCccc--
Q 003594 540 LRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLH-STEPRPIVHGSLTPSSILLDRNL-VAKISGLGLNIC-- 615 (808)
Q Consensus 540 L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH-~~~~~~iiHrDLKp~NILld~~~-~~kl~DfGla~~-- 615 (808)
+.+.+.. ......+....-.++.|+..+|.|+| . .++.|+||||+|.+++.++ ..|++|||+|..
T Consensus 108 ~f~~i~~--------~~~~~~~~~~~~~~~~ql~s~l~~~H~~---~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~ 176 (601)
T KOG0590|consen 108 LFSKISH--------PDSTGTSSSSASRYLPQLNSGLSYLHPE---NGVTHRDIKPSNSLLDESGSALKIADFGLATAYR 176 (601)
T ss_pred ccccccc--------CCccCCCCcchhhhhhhhccCccccCcc---cccccCCCCCccchhccCCCcccCCCchhhcccc
Confidence 9988831 12224566667789999999999999 6 5699999999999999999 999999999843
Q ss_pred -------------C---------------CCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhcc--C-CC
Q 003594 616 -------------D---------------QLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDG--N-AG 664 (808)
Q Consensus 616 -------------~---------------~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~--~-~~ 664 (808)
+ ...+..|+||.|+++.-+++|..|+....... ..+...... . ..
T Consensus 177 ~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~----~~~~~~~~~~~~~~~ 252 (601)
T KOG0590|consen 177 NKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKD----GRYSSWKSNKGRFTQ 252 (601)
T ss_pred ccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccc----ccceeeccccccccc
Confidence 1 12577899999999999999998876543211 111111111 1 11
Q ss_pred CCChhhHHHHHHHHHHhhccCCCcCccccHHhhH
Q 003594 665 IWPLDLAEELAGIALKCLSADQDANRDLRIAGVM 698 (808)
Q Consensus 665 ~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl 698 (808)
...........+++.+++..+ |..|.+..++-
T Consensus 253 ~~~~~~~~~~~~~l~k~l~~~--~~~r~s~~~~~ 284 (601)
T KOG0590|consen 253 LPWNSISDQAHDLLHKILKEN--PSNRLSIEELK 284 (601)
T ss_pred CccccCChhhhhcccccccCC--chhcccccccc
Confidence 222356778889999999877 88898865543
No 458
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=98.97 E-value=4.5e-09 Score=119.65 Aligned_cols=137 Identities=21% Similarity=0.251 Sum_probs=110.3
Q ss_pred CCeEEEEEEccCCCC--HHHHHHHHHHHhccCCCCccceeecccc--ceEEEEeecCCCCHHHHHhhccccccccccCCC
Q 003594 484 NHASVAIKTLNNGLS--EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARA 559 (808)
Q Consensus 484 ~~~~vAiK~l~~~~~--~~~~~~Ei~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~ 559 (808)
++.+|.|........ .....+.+.-|+.++||||++++..+.. ..|||+|-+ ..|..++...
T Consensus 36 ~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV--~Pl~~~lk~l------------ 101 (690)
T KOG1243|consen 36 DGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERV--RPLETVLKEL------------ 101 (690)
T ss_pred cCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecc--ccHHHHHHHh------------
Confidence 678888888874333 3557788999999999999999999866 679999999 4788888532
Q ss_pred CCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc----C-----------CCC----c
Q 003594 560 LRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC----D-----------QLN----V 620 (808)
Q Consensus 560 l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~----~-----------~~t----~ 620 (808)
.-....-.+.||+.||.|||.. .+++|++|.-+-|+++..|..||++|.++.. . ... .
T Consensus 102 -~~~~v~~Gl~qIl~AL~FL~~d--~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~~~P~~~~ 178 (690)
T KOG1243|consen 102 -GKEEVCLGLFQILAALSFLNDD--CNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESFDDPEEID 178 (690)
T ss_pred -HHHHHHHHHHHHHHHHHHHhcc--CCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcccChhhcC
Confidence 2344555789999999999864 3699999999999999999999999987632 0 011 1
Q ss_pred ----chhhHhHHHHHHHHHcC
Q 003594 621 ----RSDIRAFGTLLLHLLTG 637 (808)
Q Consensus 621 ----ksDVwS~Gvil~elltG 637 (808)
..|.|-||+++++++.|
T Consensus 179 ~s~~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 179 PSEWSIDSWGLGCLIEELFNG 199 (690)
T ss_pred ccccchhhhhHHHHHHHHhCc
Confidence 24999999999999999
No 459
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.91 E-value=6.5e-10 Score=125.33 Aligned_cols=222 Identities=18% Similarity=0.233 Sum_probs=158.2
Q ss_pred HhhccccccccccccCCceEEEEEEE---CCeEEEEEEccCCCC----HHHHHHHHHHHhcc-CCCCccceeecccc--c
Q 003594 458 LATEDFSERFRLKCAGDWTNVYRGRL---NHASVAIKTLNNGLS----EEDFQAKVSFLTAV-RHPHLVAVMGCCSE--L 527 (808)
Q Consensus 458 ~at~~f~~~~~i~g~G~~g~Vy~~~~---~~~~vAiK~l~~~~~----~~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~ 527 (808)
..+.+|.....+ |.|.|+.||.... ++..|++|.+..... ...-..|+-+...+ -|.+++.++..+.. .
T Consensus 262 ~~~~df~~v~~i-~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~ 340 (524)
T KOG0601|consen 262 CKLTDFGLVSKI-SDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQ 340 (524)
T ss_pred eecCCcceeEEc-cCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccc
Confidence 344567776554 5788999998776 468899998873221 11223466555555 58888887766643 7
Q ss_pred eEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCC-ccEE
Q 003594 528 KCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRN-LVAK 606 (808)
Q Consensus 528 ~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~-~~~k 606 (808)
.|+=-|||.++++...+. -...+....++++..|++.++.++|+ +.++|+|+||+||++..+ +..+
T Consensus 341 ~~ip~e~~~~~s~~l~~~----------~~~~~d~~~~~~~~~q~~~~l~~i~s---~~~~~~d~~psni~i~~~~~~~~ 407 (524)
T KOG0601|consen 341 GYIPLEFCEGGSSSLRSV----------TSQMLDEDPRLRLTAQILTALNVIHS---KLFVHLDVKPSNILISNDGFFSK 407 (524)
T ss_pred ccCchhhhcCcchhhhhH----------HHHhcCcchhhhhHHHHHhccccccc---hhhhcccccccceeeccchhhhh
Confidence 789999999999888772 33457778889999999999999999 779999999999999876 8899
Q ss_pred EEeCCCccc------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhccC
Q 003594 607 ISGLGLNIC------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGN 662 (808)
Q Consensus 607 l~DfGla~~------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~~ 662 (808)
++|||.+.. ..+..+.|+||||.-+.+.++|.+--.. ...+..+..+.
T Consensus 408 ~~~~~~~t~~~~~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~--------~~~~~~i~~~~ 479 (524)
T KOG0601|consen 408 LGDFGCWTRLAFSSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSES--------GVQSLTIRSGD 479 (524)
T ss_pred ccccccccccceecccccccccccccchhhccccccccccccccccccccccccCcccCcc--------cccceeeeccc
Confidence 999998741 2356789999999999999999753211 01111222222
Q ss_pred CCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHH
Q 003594 663 AGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEV 704 (808)
Q Consensus 663 ~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l 704 (808)
.+..| .....+..+...+...+ +..||.+.++....+..
T Consensus 480 ~p~~~-~~~~~~q~~~kv~~~~~--~~~~~l~~~l~~~~~~~ 518 (524)
T KOG0601|consen 480 TPNLP-GLKLQLQVLLKVMINPD--RKRRPSAVELSLHSEFY 518 (524)
T ss_pred ccCCC-chHHhhhhhhhhhcCCc--cccchhhhhhcccchhh
Confidence 22233 34478888888888888 88888876665554443
No 460
>COG0589 UspA Universal stress protein UspA and related nucleotide-binding proteins [Signal transduction mechanisms]
Probab=98.83 E-value=4.3e-08 Score=94.41 Aligned_cols=145 Identities=15% Similarity=0.107 Sum_probs=100.0
Q ss_pred CCeEEEEec-CCcccchhhHHHHhhhccCCCcEEEEEEEeccCCcCCcccCCCCCcCCCCCChHHHHHHHHHHHhhHHHH
Q 003594 5 EPKVYVAVG-NDLQDGYRTLDWTIRKWKAQSISIVILHVTYNISIKDFVYTPFGKLPATSLSDEKLEILKKYEQGKTDNL 83 (808)
Q Consensus 5 ~~~V~VAVd-~s~~ss~~AL~WAl~n~~~~~~~ivLlHV~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l 83 (808)
-++|++++| +++.+ ..|+.||+......+..+.++||.++.. .......... ... .............+.
T Consensus 5 ~~~il~~~d~~s~~~-~~a~~~a~~~~~~~~~~~~~~~v~~~~~---~~~~~~~~~~---~~~--~~~~~~~~~~~~~~~ 75 (154)
T COG0589 5 YKKILVAVDVGSEAA-EKALEEAVALAKRLGAPLILLVVIDPLE---PTALVSVALA---DAP--IPLSEEELEEEAEEL 75 (154)
T ss_pred cceEEEEeCCCCHHH-HHHHHHHHHHHHhcCCeEEEEEEecccc---cccccccccc---cch--hhhhHHHHHHHHHHH
Confidence 478999999 88777 7799999998776677788999986543 0111110000 000 011222334445666
Q ss_pred HHHHHhhccCCCceE-EEEEcCCccH-HHHHHHHHHHhCCcEEEecccccCCCCCCccccCcccccccccCCCcceEEEE
Q 003594 84 LSKYLGFCGKVKAEI-LKVEKSDEPV-HKLILDLVSRLTITKLVMGLSFMIPSAGKSRTAVSGSYFVHHHMPDYCELFII 161 (808)
Q Consensus 84 l~~~~~~C~~~~v~~-~~i~~~~~dv-~~~I~e~i~~~~i~~LVmGs~~~g~~~~kr~~~~svs~yv~~~ap~~C~V~vv 161 (808)
+........+.+++. ...... +++ ...|++++.+.++|.||||+ +|+..+++.++||++.+|+++++ |+|++|
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~i~~~a~~~~adliV~G~--~g~~~l~~~llGsvs~~v~~~~~--~pVlvv 150 (154)
T COG0589 76 LAEAKALAEAAGVPVVETEVVE-GSPSAEEILELAEEEDADLIVVGS--RGRSGLSRLLLGSVAEKVLRHAP--CPVLVV 150 (154)
T ss_pred HHHHHHHHHHcCCCeeEEEEec-CCCcHHHHHHHHHHhCCCEEEECC--CCCccccceeeehhHHHHHhcCC--CCEEEE
Confidence 666666666666553 433433 566 89999999999999999999 45555466788999999999999 999998
Q ss_pred eC
Q 003594 162 CG 163 (808)
Q Consensus 162 ~k 163 (808)
..
T Consensus 151 ~~ 152 (154)
T COG0589 151 RS 152 (154)
T ss_pred cc
Confidence 64
No 461
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.80 E-value=4.8e-08 Score=103.83 Aligned_cols=147 Identities=12% Similarity=0.003 Sum_probs=104.1
Q ss_pred eEEEEEEECCeEEEEEEccCCCC-------------HHHHHHHHHHHhccCCCCc--cceeeccc-------cceEEEEe
Q 003594 476 TNVYRGRLNHASVAIKTLNNGLS-------------EEDFQAKVSFLTAVRHPHL--VAVMGCCS-------ELKCIVFE 533 (808)
Q Consensus 476 g~Vy~~~~~~~~vAiK~l~~~~~-------------~~~~~~Ei~il~~l~HpnI--v~l~g~~~-------~~~~lV~E 533 (808)
..|+++.+.|+.|.||....... ...+.+|...+.++..-+| ...+++.. ...+||||
T Consensus 36 rrvvr~~~~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~~s~LVte 115 (268)
T PRK15123 36 RRTLRFELAGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATRTSFIITE 115 (268)
T ss_pred ceEEEEEECCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccceeEEEEe
Confidence 45778888999999997752221 1147899999988843333 33444432 14689999
Q ss_pred ecCCC-CHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCC-------CccE
Q 003594 534 YMPNG-NLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDR-------NLVA 605 (808)
Q Consensus 534 y~~~g-sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~-------~~~~ 605 (808)
++++. +|.+++... ...+.+...+..++.+++..+.-||. .||+|+|++|+|||++. ++.+
T Consensus 116 ~l~~~~sL~~~~~~~--------~~~~~~~~~~~~ll~~la~~i~~LH~---~Gi~HgDL~~~NiLl~~~~~~~~~~~~~ 184 (268)
T PRK15123 116 DLAPTISLEDYCADW--------ATNPPDPRLKRMLIKRVATMVRDMHA---AGINHRDCYICHFLLHLPFPGREEDLKL 184 (268)
T ss_pred eCCCCccHHHHHHhh--------cccCCCHHHHHHHHHHHHHHHHHHHH---CcCccCCCChhhEEEeccccCCCCCceE
Confidence 99976 899998432 12344566778899999999999999 55999999999999975 5789
Q ss_pred EEEeCCCccc-CCCCcchhhHhHHHHHHH
Q 003594 606 KISGLGLNIC-DQLNVRSDIRAFGTLLLH 633 (808)
Q Consensus 606 kl~DfGla~~-~~~t~ksDVwS~Gvil~e 633 (808)
.|+||+.+.. .....+.-+.-++.+++-
T Consensus 185 ~LIDl~r~~~~~~~~~~~r~~dL~~L~~s 213 (268)
T PRK15123 185 SVIDLHRAQIRARVPRRWRDKDLAGLYFS 213 (268)
T ss_pred EEEECCcccccCCCChHHHHHHHHHHHHH
Confidence 9999998854 223333334555555444
No 462
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.80 E-value=5.3e-09 Score=118.09 Aligned_cols=214 Identities=19% Similarity=0.208 Sum_probs=149.2
Q ss_pred ccc--CCceEEEEEEE----CCeEEEEEEcc----CCCCHHHHHHHHHHHhcc-CCCCccceeecccc--ceEEEEeecC
Q 003594 470 KCA--GDWTNVYRGRL----NHASVAIKTLN----NGLSEEDFQAKVSFLTAV-RHPHLVAVMGCCSE--LKCIVFEYMP 536 (808)
Q Consensus 470 ~g~--G~~g~Vy~~~~----~~~~vAiK~l~----~~~~~~~~~~Ei~il~~l-~HpnIv~l~g~~~~--~~~lV~Ey~~ 536 (808)
.|. |.+|.||.+.. ++..+|+|.-+ .......=.+|+.-..++ .|+|.|+.+..+.+ ..++-+|++
T Consensus 122 ~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lfiqtE~~- 200 (524)
T KOG0601|consen 122 TGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILFIQTELC- 200 (524)
T ss_pred cccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcceeeeccc-
Confidence 456 89999999887 46789999844 122333445677777777 49999998877765 677888888
Q ss_pred CCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHH----HhhhhhhcCCCCeEecCCCCCCcccCCC-ccEEEEeCC
Q 003594 537 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCL----GLSFLHSTEPRPIVHGSLTPSSILLDRN-LVAKISGLG 611 (808)
Q Consensus 537 ~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~----aL~yLH~~~~~~iiHrDLKp~NILld~~-~~~kl~DfG 611 (808)
+.+|..+.+.. ...++....+.++.+... ||..+|+ .+|+|-|+||.||++..+ ...+++|||
T Consensus 201 ~~sl~~~~~~~---------~~~~p~~~l~~~~~~~~~~~~~al~~~hs---~~~~~~~~kp~~i~~~~~~~s~~~~df~ 268 (524)
T KOG0601|consen 201 GESLQSYCHTP---------CNFLPDNLLWNSLRDWLSRDVTALSHLHS---NNIVHDDLKPANIFTTSDWTSCKLTDFG 268 (524)
T ss_pred cchhHHhhhcc---------cccCCchhhhhHHhhhhhcccccccccCC---CcccccccchhheecccccceeecCCcc
Confidence 47888888532 333566666777777777 9999999 559999999999999999 889999999
Q ss_pred Cccc-----------------------------CCCCcchhhHhHHHHHHHHHcCCCCchhhHHHhhhcHHHHHHHhcc-
Q 003594 612 LNIC-----------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDG- 661 (808)
Q Consensus 612 la~~-----------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~~~~~~~~~~~~~~~~ld~- 661 (808)
+... +-++..+|+|++|.++++..+|..++..... ..+..+-..
T Consensus 269 ~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~------~~W~~~r~~~ 342 (524)
T KOG0601|consen 269 LVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKN------SSWSQLRQGY 342 (524)
T ss_pred eeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCC------CCcccccccc
Confidence 8532 3467899999999999999988654321100 001111000
Q ss_pred CCCCCChhhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHHH
Q 003594 662 NAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVR 705 (808)
Q Consensus 662 ~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~ 705 (808)
...++....+..+...+..++..+ +..|++ .+++..|.-|.
T Consensus 343 ip~e~~~~~s~~l~~~~~~~~d~~--~~~~~~-~q~~~~l~~i~ 383 (524)
T KOG0601|consen 343 IPLEFCEGGSSSLRSVTSQMLDED--PRLRLT-AQILTALNVIH 383 (524)
T ss_pred CchhhhcCcchhhhhHHHHhcCcc--hhhhhH-HHHHhcccccc
Confidence 111112223445666888888888 889998 55555565554
No 463
>KOG4642 consensus Chaperone-dependent E3 ubiquitin protein ligase (contains TPR repeats) [Posttranslational modification, protein turnover, chaperones]
Probab=98.71 E-value=1.6e-08 Score=101.42 Aligned_cols=78 Identities=24% Similarity=0.405 Sum_probs=74.6
Q ss_pred CCCCCccccccccccccCCCcccCCCcchhhHHHHHHHcCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHhcCCCC
Q 003594 730 SNDVPSVFICPIFQEVMKTPHVAADGFSYELEAMEEWLGMGHDTSPMTNLRLKHKYLTPNHTLRSLIQEWHNKQSSVH 807 (808)
Q Consensus 730 s~~~Ps~f~cPI~~evm~dP~v~~dg~tye~~ai~~wl~~~~~tsP~t~~~l~~~~l~pN~~l~~~i~~~~~~~~~~~ 807 (808)
...+|.+.+|.|+.++|.+|++++.|.||++..|++++..-+..+|+|+.+|...+++||++|+..|..|+..|.|+-
T Consensus 205 ~rEvpd~lcgkIt~el~~~pvi~psgIty~ra~I~Ehl~rvghfdpvtr~~Lte~q~ipN~alkevIa~fl~~n~w~~ 282 (284)
T KOG4642|consen 205 KREVPDYLCGKITLELMREPVITPSGITYDRADIEEHLQRVGHFDPVTRWPLTEYQLIPNLALKEVIAAFLKENEWAD 282 (284)
T ss_pred cccccchhhhhhhHHhhcCCccCccccchhHHHHHHHHHHhccCCchhcccCCHHhhccchHHHHHHHHHHHhccccc
Confidence 567999999999999999999999999999999999998888899999999999999999999999999999999974
No 464
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.66 E-value=7.9e-09 Score=122.18 Aligned_cols=206 Identities=19% Similarity=0.206 Sum_probs=146.7
Q ss_pred ccccCCceEEEEEEE--CCeEEEEEEcc-----CCCCHHHHHHHHHHHhccCCCCccceeec--cccceEEEEeecCCCC
Q 003594 469 LKCAGDWTNVYRGRL--NHASVAIKTLN-----NGLSEEDFQAKVSFLTAVRHPHLVAVMGC--CSELKCIVFEYMPNGN 539 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~--~~~~vAiK~l~-----~~~~~~~~~~Ei~il~~l~HpnIv~l~g~--~~~~~~lV~Ey~~~gs 539 (808)
-+.+|+++.++...- .|...++|+.. .....+....+-.++-..+||.++...-- |....+||++|+.|++
T Consensus 811 p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L~~~~~~~~~ 890 (1205)
T KOG0606|consen 811 PSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPLVGHYLNGGD 890 (1205)
T ss_pred cccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcchhhHHhccCC
Confidence 456788998887765 34444555443 11122333444444444566777766555 4558899999999999
Q ss_pred HHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc----
Q 003594 540 LRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC---- 615 (808)
Q Consensus 540 L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~---- 615 (808)
|...|+. .+..+..-....+..+..+++|||+ ..++|+|++|.|+|+..+|..+++|||+...
T Consensus 891 ~~Skl~~----------~~~~saepaRs~i~~~vqs~e~L~s---~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~ 957 (1205)
T KOG0606|consen 891 LPSKLHN----------SGCLSAEPARSPILERVQSLESLHS---SLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLI 957 (1205)
T ss_pred chhhhhc----------CCCcccccccchhHHHHhhhhcccc---chhhcccccccchhhcccCCcccCccccccccccc
Confidence 9999953 3345555566678889999999999 4599999999999999999999999984311
Q ss_pred ----------------------------------------------------CCCCcchhhHhHHHHHHHHHcCCCCchh
Q 003594 616 ----------------------------------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGL 643 (808)
Q Consensus 616 ----------------------------------------------------~~~t~ksDVwS~Gvil~elltG~~P~~~ 643 (808)
...+..+|+|++|++++|.++|.+||..
T Consensus 958 ~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp~na 1037 (1205)
T KOG0606|consen 958 PPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPPFNA 1037 (1205)
T ss_pred cCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCCCCC
Confidence 1235678999999999999999999976
Q ss_pred hHHHhhhcHHHHHHHhccCCCCC---ChhhHHHHHHHHHHhhccCCCcCccccHH
Q 003594 644 VEKAMALDQTTLMQVLDGNAGIW---PLDLAEELAGIALKCLSADQDANRDLRIA 695 (808)
Q Consensus 644 ~~~~~~~~~~~~~~~ld~~~~~~---p~~~~~~l~~Li~~Cl~~dp~p~~Rps~~ 695 (808)
.. .+..+..++.. ...| |...+....+++...+..+ |.+|..+.
T Consensus 1038 ~t-----pq~~f~ni~~~-~~~~p~g~~~~s~~aq~~~~~ll~~~--~~qr~~a~ 1084 (1205)
T KOG0606|consen 1038 ET-----PQQIFENILNR-DIPWPEGPEEGSYEAQDLINRLLTEE--PTQRLGAK 1084 (1205)
T ss_pred cc-----hhhhhhccccC-CCCCCCCccccChhhhhhhhhhhccC--chhccCcc
Confidence 42 23334444432 2334 3467788999999999999 77777644
No 465
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.65 E-value=7e-08 Score=96.99 Aligned_cols=122 Identities=23% Similarity=0.231 Sum_probs=80.3
Q ss_pred EEEEEEE-CCeEEEEEEccCCC-----------------------C-----HHHHHHHHHHHhccCCC--Cccceeeccc
Q 003594 477 NVYRGRL-NHASVAIKTLNNGL-----------------------S-----EEDFQAKVSFLTAVRHP--HLVAVMGCCS 525 (808)
Q Consensus 477 ~Vy~~~~-~~~~vAiK~l~~~~-----------------------~-----~~~~~~Ei~il~~l~Hp--nIv~l~g~~~ 525 (808)
.||.|.. +|..||||+.+... . .....+|++.|.++..- ++.+.+++
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~-- 78 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY-- 78 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE--
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE--
Confidence 4899998 78999999876110 0 12366899999999765 45566644
Q ss_pred cceEEEEeecC--CCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhh-hhhcCCCCeEecCCCCCCcccCCC
Q 003594 526 ELKCIVFEYMP--NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSF-LHSTEPRPIVHGSLTPSSILLDRN 602 (808)
Q Consensus 526 ~~~~lV~Ey~~--~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~y-LH~~~~~~iiHrDLKp~NILld~~ 602 (808)
+..+|||||++ |..+..+.. . .++......++.+++..+.. +|. .||+||||.+.|||++++
T Consensus 79 ~~~~ivME~I~~~G~~~~~l~~-~-----------~~~~~~~~~~~~~il~~~~~~~~~---~givHGDLs~~NIlv~~~ 143 (188)
T PF01163_consen 79 NRNVIVMEYIGEDGVPLPRLKD-V-----------DLSPEEPKELLEEILEEIIKMLHK---AGIVHGDLSEYNILVDDG 143 (188)
T ss_dssp ETTEEEEE--EETTEEGGCHHH-C-----------GGGGSTHHHHHHHHHHHHHHHHHC---TTEEESS-STTSEEEETT
T ss_pred eCCEEEEEecCCCccchhhHHh-c-----------cccchhHHHHHHHHHHHHHHHHHh---cCceecCCChhhEEeecc
Confidence 35689999998 655554432 1 11133445677888886555 467 569999999999999887
Q ss_pred ccEEEEeCCCcccC
Q 003594 603 LVAKISGLGLNICD 616 (808)
Q Consensus 603 ~~~kl~DfGla~~~ 616 (808)
.+.|+|||.+...
T Consensus 144 -~~~iIDf~qav~~ 156 (188)
T PF01163_consen 144 -KVYIIDFGQAVDS 156 (188)
T ss_dssp -CEEE--GTTEEET
T ss_pred -eEEEEecCcceec
Confidence 9999999988653
No 466
>PRK09902 hypothetical protein; Provisional
Probab=98.49 E-value=1.2e-06 Score=88.78 Aligned_cols=133 Identities=14% Similarity=0.074 Sum_probs=102.5
Q ss_pred ccCCceEEEEEEECCeEEEEEEccC--------CCCHHHHHHHHHHHhccCCC--Cccceeecccc-------ceEEEEe
Q 003594 471 CAGDWTNVYRGRLNHASVAIKTLNN--------GLSEEDFQAKVSFLTAVRHP--HLVAVMGCCSE-------LKCIVFE 533 (808)
Q Consensus 471 g~G~~g~Vy~~~~~~~~vAiK~l~~--------~~~~~~~~~Ei~il~~l~Hp--nIv~l~g~~~~-------~~~lV~E 533 (808)
|+||.+-|++-.+.|..+=+|.-.. ......|.+|+..|.+|..- .+.+.+ ++.. ..+||+|
T Consensus 27 ~rgG~SgV~r~~~~g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pv-f~~~~k~~~~~rA~LVTe 105 (216)
T PRK09902 27 RRNGMSGVQCVERNGKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIV-FGEAVKIEGEWRALLVTE 105 (216)
T ss_pred CCCCcceEEEEEeCCcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccc-eeeeeccCCceEEEEEEE
Confidence 4577888999999888899997651 33567899999999999532 244444 3321 4689999
Q ss_pred ecCC-CCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCcc--EEEEeC
Q 003594 534 YMPN-GNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLV--AKISGL 610 (808)
Q Consensus 534 y~~~-gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~--~kl~Df 610 (808)
-++| -+|.+++... ...+.+...+..++.+|+..|.-||. .++.|+|+.+.|||++.++. ++++||
T Consensus 106 ~L~g~~~L~~~l~~~--------~~~~~~~~~k~~il~~va~~ia~LH~---~Gv~Hgdly~khIll~~~g~~~v~lIDl 174 (216)
T PRK09902 106 DMAGFISIADWYAQH--------AVSPYSDEVRQAMLKAVALAFKKMHS---VNRQHGCCYVRHIYVKTEGKAEAGFLDL 174 (216)
T ss_pred eCCCCccHHHHHhcC--------CcCCcchHHHHHHHHHHHHHHHHHHH---CCCcCCCCCHhheeecCCCCeeEEEEEh
Confidence 8865 5899988432 23456777788999999999999999 56999999999999986666 999999
Q ss_pred CCccc
Q 003594 611 GLNIC 615 (808)
Q Consensus 611 Gla~~ 615 (808)
.-++.
T Consensus 175 Ek~r~ 179 (216)
T PRK09902 175 EKSRR 179 (216)
T ss_pred hccch
Confidence 87654
No 467
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.48 E-value=4.1e-06 Score=90.83 Aligned_cols=234 Identities=15% Similarity=0.141 Sum_probs=146.6
Q ss_pred cccccCCceEEEEEEECCeEEEEEEccCCCCHHHHHHHHHHHhcc-CCCCccc--------eeecccc-ceEEEEeecCC
Q 003594 468 RLKCAGDWTNVYRGRLNHASVAIKTLNNGLSEEDFQAKVSFLTAV-RHPHLVA--------VMGCCSE-LKCIVFEYMPN 537 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~~~~~vAiK~l~~~~~~~~~~~Ei~il~~l-~HpnIv~--------l~g~~~~-~~~lV~Ey~~~ 537 (808)
+-+|+|+-+.+|-.---+. .+.|+.+...-..+ .+-+..|... .||-+-. |+|--.. -.-+.|..++|
T Consensus 17 r~LgqGgea~ly~l~e~~d-~VAKIYh~Pppa~~-aqk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflmP~v~g 94 (637)
T COG4248 17 RPLGQGGEADLYTLGEVRD-QVAKIYHAPPPAAQ-AQKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLMPKVSG 94 (637)
T ss_pred ccccCCccceeeecchhhc-hhheeecCCCchHH-HHHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEecccCCC
Confidence 3457888999986433222 33477662221111 1223334443 5664432 2222222 24577888876
Q ss_pred CC-HHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCC----
Q 003594 538 GN-LRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL---- 612 (808)
Q Consensus 538 gs-L~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGl---- 612 (808)
.- ..+++....+. ...+...|...++.+..++.+.+-||.++ .+-||+.++|+|+.+++.+.|.|-..
T Consensus 95 ~~pI~~~y~p~tRR----qs~P~~~w~fllrvaRnlA~aFA~lH~~G---h~vGDVn~~~~lVsd~~~V~LVdsDsfqi~ 167 (637)
T COG4248 95 KEPIHMIYSPATRR----QSYPHCAWDFLLRVARNLASAFATLHEHG---HVVGDVNQNSFLVSDDSKVVLVDSDSFQIN 167 (637)
T ss_pred ccchhhhcCchhhc----ccCCccccHHHHHHHHHHHHHHHHHHhcC---CcccccCccceeeecCceEEEEcccceeec
Confidence 42 33333221111 34566899999999999999999999954 89999999999999888888776332
Q ss_pred ------------ccc-------------CCCCcchhhHhHHHHHHHHHcC-CCCchhhHHHh--------hhcHHHHHHH
Q 003594 613 ------------NIC-------------DQLNVRSDIRAFGTLLLHLLTG-RNWAGLVEKAM--------ALDQTTLMQV 658 (808)
Q Consensus 613 ------------a~~-------------~~~t~ksDVwS~Gvil~elltG-~~P~~~~~~~~--------~~~~~~~~~~ 658 (808)
+.. ..-+...|.|.||+++++++.| ++||..+.... .+..+.+...
T Consensus 168 ~ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~f~ya 247 (637)
T COG4248 168 ANGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGRFAYA 247 (637)
T ss_pred cCCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcceeeec
Confidence 111 1246789999999999999886 89986532210 0111111111
Q ss_pred hcc------CCCCCCh-hhHHHHHHHHHHhhccCCCcCccccHHhhHHHHHHHHHhccc
Q 003594 659 LDG------NAGIWPL-DLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVRKKADG 710 (808)
Q Consensus 659 ld~------~~~~~p~-~~~~~l~~Li~~Cl~~dp~p~~Rps~~evl~~L~~l~~~~~~ 710 (808)
-+. ....||. -.++.+..|..+|+...-.+..||++..-+..|..++.....
T Consensus 248 ~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L~~ 306 (637)
T COG4248 248 SDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQLKK 306 (637)
T ss_pred hhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhhhh
Confidence 111 2233443 357789999999998765577999999999999888765543
No 468
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.44 E-value=7e-07 Score=91.53 Aligned_cols=121 Identities=22% Similarity=0.191 Sum_probs=89.4
Q ss_pred ECCeEEEEEEccC---------CCCHHHHHHHHHHHhccCCCC--ccceeecccc------ceEEEEeecCCC-CHHHHH
Q 003594 483 LNHASVAIKTLNN---------GLSEEDFQAKVSFLTAVRHPH--LVAVMGCCSE------LKCIVFEYMPNG-NLRDKL 544 (808)
Q Consensus 483 ~~~~~vAiK~l~~---------~~~~~~~~~Ei~il~~l~Hpn--Iv~l~g~~~~------~~~lV~Ey~~~g-sL~~~l 544 (808)
+.++.+-+|.... ........+|...+..|..-. ..+.+++... ..+||+|++++. +|.+++
T Consensus 30 ~~~~~y~~k~~~~~~~~~~~~~~~~~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~ 109 (206)
T PF06293_consen 30 LVGRRYYRKRLWNKLRRDRLRFPLRRSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLL 109 (206)
T ss_pred ccceEEEECCeechhccchhhhcccchHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHH
Confidence 3456666665331 123456888998888885333 3455555433 358999999984 899999
Q ss_pred hhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCc---cEEEEeCCCcccC
Q 003594 545 FTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNL---VAKISGLGLNICD 616 (808)
Q Consensus 545 ~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~---~~kl~DfGla~~~ 616 (808)
... ..++......++.+++..+.-||. .||+|+|++|.|||++.+. .+.++||+.++..
T Consensus 110 ~~~----------~~~~~~~~~~ll~~l~~~i~~lH~---~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~ 171 (206)
T PF06293_consen 110 QQW----------EQLDPSQRRELLRALARLIAKLHD---AGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFR 171 (206)
T ss_pred Hhh----------cccchhhHHHHHHHHHHHHHHHHH---CcCCCCCCCcccEEEeCCCCceeEEEEcchhceeC
Confidence 532 225666778899999999999999 5699999999999998876 8999999987653
No 469
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.41 E-value=2.7e-06 Score=97.85 Aligned_cols=133 Identities=15% Similarity=0.182 Sum_probs=85.6
Q ss_pred ccccCCceEEEEEEE-CCeEEEEEEccCCCCH------------------------------------------HHHHHH
Q 003594 469 LKCAGDWTNVYRGRL-NHASVAIKTLNNGLSE------------------------------------------EDFQAK 505 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~-~~~~vAiK~l~~~~~~------------------------------------------~~~~~E 505 (808)
-++.++-|.||+|++ +|+.||||+.+++... -+|.+|
T Consensus 132 PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~E 211 (517)
T COG0661 132 PIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRRE 211 (517)
T ss_pred chhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHHH
Confidence 457889999999999 5999999998743210 014455
Q ss_pred HHHHhccC-----CCCc--cceeeccccceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhh
Q 003594 506 VSFLTAVR-----HPHL--VAVMGCCSELKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSF 578 (808)
Q Consensus 506 i~il~~l~-----HpnI--v~l~g~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~y 578 (808)
...+.+++ .|++ .+++--+.....|+|||++|..+.+...-. ...++-........++.----+
T Consensus 212 A~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~---------~~g~d~k~ia~~~~~~f~~q~~ 282 (517)
T COG0661 212 AANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALK---------SAGIDRKELAELLVRAFLRQLL 282 (517)
T ss_pred HHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHH---------hcCCCHHHHHHHHHHHHHHHHH
Confidence 55555552 2332 122222234678999999999998885322 1334432222222222211222
Q ss_pred hhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc
Q 003594 579 LHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC 615 (808)
Q Consensus 579 LH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~ 615 (808)
- .|++|.|..|.||+++.+|.+.+.|||+...
T Consensus 283 ~-----dgffHaDpHpGNi~v~~~g~i~~lDfGi~g~ 314 (517)
T COG0661 283 R-----DGFFHADPHPGNILVRSDGRIVLLDFGIVGR 314 (517)
T ss_pred h-----cCccccCCCccceEEecCCcEEEEcCcceec
Confidence 2 3499999999999999999999999999743
No 470
>PRK12652 putative monovalent cation/H+ antiporter subunit E; Reviewed
Probab=98.41 E-value=1.3e-06 Score=96.12 Aligned_cols=103 Identities=9% Similarity=0.159 Sum_probs=70.5
Q ss_pred CeEEEEecCCcccchhhHHHHhhhccCC--CcEEEEEEEeccCCcCCcccCCCCCcCCCCCChHHHHHHHHHHHhhHHHH
Q 003594 6 PKVYVAVGNDLQDGYRTLDWTIRKWKAQ--SISIVILHVTYNISIKDFVYTPFGKLPATSLSDEKLEILKKYEQGKTDNL 83 (808)
Q Consensus 6 ~~V~VAVd~s~~ss~~AL~WAl~n~~~~--~~~ivLlHV~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l 83 (808)
.+|+||||+|+.| .+|+..|++-.... +..|++|||.++.. ..+. . .......+++
T Consensus 6 kkILVavDGSe~S-~~Al~~AielA~~~g~~AeL~lL~Vv~~~~---~~~~----------~--------~~~~~~~eel 63 (357)
T PRK12652 6 NRLLVPVADSVTV-RQTVAYAVESAEEAAETPTVHLVAAASGRA---VDPE----------G--------QDELAAAEEL 63 (357)
T ss_pred CeEEEEeCCCHHH-HHHHHHHHHHHHhcCCCCEEEEEEEecCcc---cccc----------h--------hHHHHHHHHH
Confidence 6899999999888 77999999876543 57899999986532 0000 0 0111223344
Q ss_pred HHHHHhhccC------CCceEEEEEcC-------CccHHHHHHHHHHHhCCcEEEecccc
Q 003594 84 LSKYLGFCGK------VKAEILKVEKS-------DEPVHKLILDLVSRLTITKLVMGLSF 130 (808)
Q Consensus 84 l~~~~~~C~~------~~v~~~~i~~~-------~~dv~~~I~e~i~~~~i~~LVmGs~~ 130 (808)
++.....+.+ .++++...... .++|++.|+++++++++|.||||-.+
T Consensus 64 le~~~~~~~~~l~~~~~gV~ve~~vv~~~~~~~~~G~pae~Iv~~Aee~~aDLIVm~~~~ 123 (357)
T PRK12652 64 LERVEVWATEDLGDDASSVTIETALLGTDEYLFGPGDYAEVLIAYAEEHGIDRVVLDPEY 123 (357)
T ss_pred HHHHHHHHHHhhhcccCCCceEEEEEeccccccCCCCHHHHHHHHHHHcCCCEEEECCCC
Confidence 5555444432 45665554433 27999999999999999999999843
No 471
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=98.25 E-value=3.4e-06 Score=85.00 Aligned_cols=165 Identities=19% Similarity=0.177 Sum_probs=108.7
Q ss_pred HHHHHHHhccCC-CCccceeeccccceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhh
Q 003594 503 QAKVSFLTAVRH-PHLVAVMGCCSELKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHS 581 (808)
Q Consensus 503 ~~Ei~il~~l~H-pnIv~l~g~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~ 581 (808)
..|.-+|..+.+ +++.+++|+|.. ++|.||...+++...-... .....-+|..|.+|+.+++..+.+|+.
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG~--~~v~E~~~~~~~~~~~~~l-------~~~~~~~w~~R~~iA~~lL~~l~~l~~ 77 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCGR--FYVVEYVGAGSLYGIYRPL-------SQFLQSPWEQRAKIALQLLELLEELDH 77 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECCC--EEEEEeecCcccccccccc-------ccccccCHHHHHHHHHHHHHHHHHHhc
Confidence 458888888876 699999999965 6799999877665321000 122347999999999999999999998
Q ss_pred cCCCCeEecCCCCCCcccCCCccEEEEeCCCccc----------CCCCcchhhHhHHHHHH-----HHHcCCCCchhhHH
Q 003594 582 TEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC----------DQLNVRSDIRAFGTLLL-----HLLTGRNWAGLVEK 646 (808)
Q Consensus 582 ~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~----------~~~t~ksDVwS~Gvil~-----elltG~~P~~~~~~ 646 (808)
.....+.-.|++|+|+-++++|.+|++|...... .....-.|..-|.|.-. ..+++..- . .
T Consensus 78 ~~~~~~~lcDv~~~nfgv~~~~~lk~iDld~v~~~~~~~~~l~~~~c~~~~DC~~~dC~s~c~~~~~~C~~~~~-~--~- 153 (188)
T PF12260_consen 78 GPLGFFYLCDVSPDNFGVNDDGRLKLIDLDDVFVEDKLDEILSERSCESDEDCTFFDCRSFCDLSEGRCSGQNE-N--N- 153 (188)
T ss_pred CCCCcEEEeecchHHeEEeCCCcEEEEechhcchhHHhhhhccccCCCCCCCcCcCCccCccCCCcCcCCCccc-c--C-
Confidence 7655688899999999999999999999987643 11222344222333321 11111110 0 0
Q ss_pred HhhhcHHHHHHHhccCCCCCChhhHHHHHHHHHHhhc
Q 003594 647 AMALDQTTLMQVLDGNAGIWPLDLAEELAGIALKCLS 683 (808)
Q Consensus 647 ~~~~~~~~~~~~ld~~~~~~p~~~~~~l~~Li~~Cl~ 683 (808)
.-......+++......|....+++..++..|.+
T Consensus 154 ---Nl~~vC~~l~~~lL~~~p~~l~~~L~~lL~~C~~ 187 (188)
T PF12260_consen 154 ---NLQAVCQKLLDYLLHGPPSELQEELQKLLQECAN 187 (188)
T ss_pred ---cHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcC
Confidence 0111222333333444477888888889888875
No 472
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.22 E-value=1.1e-05 Score=83.97 Aligned_cols=144 Identities=10% Similarity=0.120 Sum_probs=83.8
Q ss_pred cccccCCceEEEEEEECCeEEEEEEccCCCCHHHHHHHHHHHhccCCCC--ccceeecccc--ceEEEEeecCCCC-HHH
Q 003594 468 RLKCAGDWTNVYRGRLNHASVAIKTLNNGLSEEDFQAKVSFLTAVRHPH--LVAVMGCCSE--LKCIVFEYMPNGN-LRD 542 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~~~~~vAiK~l~~~~~~~~~~~Ei~il~~l~Hpn--Iv~l~g~~~~--~~~lV~Ey~~~gs-L~~ 542 (808)
..+|+|..+.||+. .|..+++|............+|.+++..+..-. +.+.++++.+ ...+|||+++|.+ +..
T Consensus 7 ~~i~~G~t~~~y~~--~~~~~VlR~~~~~~~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~~~~ 84 (226)
T TIGR02172 7 TQTGEGGNGESYTH--KTGKWMLKLYNPGFDKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRSFSR 84 (226)
T ss_pred eeecCCCCcceeEe--cCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccchhh
Confidence 34578889999984 355788999886666677899999999886433 3566666533 5678999999863 221
Q ss_pred HH--------------hhccccccccccCCCCCHHHHH-HHHH----------HHHH-Hhhhhhhc-CCCCeEecCCCCC
Q 003594 543 KL--------------FTSQRNYKNCSRARALRWLDRI-HIAH----------EVCL-GLSFLHST-EPRPIVHGSLTPS 595 (808)
Q Consensus 543 ~l--------------~~~~~~~~~~~~~~~l~~~~~~-~i~~----------qia~-aL~yLH~~-~~~~iiHrDLKp~ 595 (808)
.+ .......-. ......+..... ++.. .+.. ...+|... .+..++|+|+.|.
T Consensus 85 ~~~~~~~~~~~l~~~la~~l~~lH~-~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~~~~ 163 (226)
T TIGR02172 85 IISDNPSRLEEIAKIFAEMAKKLHS-TKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDFQIG 163 (226)
T ss_pred hhcCCHHHHHHHHHHHHHHHHHHhC-CCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCCCCC
Confidence 11 110000000 000011111100 0000 0001 11222211 2245799999999
Q ss_pred CcccCCCccEEEEeCCCccc
Q 003594 596 SILLDRNLVAKISGLGLNIC 615 (808)
Q Consensus 596 NILld~~~~~kl~DfGla~~ 615 (808)
||+++.++ +.|+||+.+..
T Consensus 164 Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 164 NLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred cEEEcCCC-cEEEechhcCc
Confidence 99999888 99999998754
No 473
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.19 E-value=8e-06 Score=93.73 Aligned_cols=133 Identities=22% Similarity=0.218 Sum_probs=90.9
Q ss_pred ccccCCceEEEEEEE-CCeEEEEEEccCCCCH---------------------------------------HHHHHHHHH
Q 003594 469 LKCAGDWTNVYRGRL-NHASVAIKTLNNGLSE---------------------------------------EDFQAKVSF 508 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~-~~~~vAiK~l~~~~~~---------------------------------------~~~~~Ei~i 508 (808)
-+|.-+.|.||++++ +|..||||+-++.... -+|.+|++-
T Consensus 168 piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~N 247 (538)
T KOG1235|consen 168 PIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAKN 247 (538)
T ss_pred hhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHHh
Confidence 456778999999999 7899999998743210 025556555
Q ss_pred Hhcc----CCCC------ccceeeccccceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhh
Q 003594 509 LTAV----RHPH------LVAVMGCCSELKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSF 578 (808)
Q Consensus 509 l~~l----~Hpn------Iv~l~g~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~y 578 (808)
..++ .|-+ |.++|-.+.....|+||||+|..+.|.-.- ....++...+..-+.+...-+-+
T Consensus 248 ae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i---------~~~gi~~~~i~~~l~~~~~~qIf 318 (538)
T KOG1235|consen 248 AERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAI---------DKRGISPHDILNKLVEAYLEQIF 318 (538)
T ss_pred HHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHH---------HHcCCCHHHHHHHHHHHHHHHHH
Confidence 4444 4555 455555556688999999999888776532 23345555444444443333333
Q ss_pred hhhcCCCCeEecCCCCCCcccC----CCccEEEEeCCCccc
Q 003594 579 LHSTEPRPIVHGSLTPSSILLD----RNLVAKISGLGLNIC 615 (808)
Q Consensus 579 LH~~~~~~iiHrDLKp~NILld----~~~~~kl~DfGla~~ 615 (808)
-| |++|+|-.|.||+++ .++.+.+-|||+...
T Consensus 319 ~~-----GffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~ 354 (538)
T KOG1235|consen 319 KT-----GFFHADPHPGNILVRPNPEGDEEIVLLDHGLYAV 354 (538)
T ss_pred hc-----CCccCCCCCCcEEEecCCCCCccEEEEccccccc
Confidence 33 499999999999998 368999999999754
No 474
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.11 E-value=1e-05 Score=84.06 Aligned_cols=126 Identities=18% Similarity=0.130 Sum_probs=85.7
Q ss_pred cccccCCceEEEEEEE-CCeEEEEEEccCCC------------------------CHHHHHHHHHHHhccCCC--Cccce
Q 003594 468 RLKCAGDWTNVYRGRL-NHASVAIKTLNNGL------------------------SEEDFQAKVSFLTAVRHP--HLVAV 520 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~-~~~~vAiK~l~~~~------------------------~~~~~~~Ei~il~~l~Hp--nIv~l 520 (808)
..+|-|--+.||.|.. .|.++|||.-+-.. +.....+|.++|.+|... .+.+.
T Consensus 97 ~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~VP~P 176 (304)
T COG0478 97 TKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVKVPKP 176 (304)
T ss_pred cccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCCCCCc
Confidence 4567888999999999 69999999754110 112456899999988644 45554
Q ss_pred eeccccceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccC
Q 003594 521 MGCCSELKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLD 600 (808)
Q Consensus 521 ~g~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld 600 (808)
+++ +.-.+||||++|-.|...- ++-...-.|+..|+.-+.-+-. .||||||+++=|||++
T Consensus 177 ~~~--nRHaVvMe~ieG~eL~~~r---------------~~~en~~~il~~il~~~~~~~~---~GiVHGDlSefNIlV~ 236 (304)
T COG0478 177 IAW--NRHAVVMEYIEGVELYRLR---------------LDVENPDEILDKILEEVRKAYR---RGIVHGDLSEFNILVT 236 (304)
T ss_pred ccc--ccceeeeehcccceeeccc---------------CcccCHHHHHHHHHHHHHHHHH---cCccccCCchheEEEe
Confidence 443 3457999999985554321 1122223344444444433334 5699999999999999
Q ss_pred CCccEEEEeCCCc
Q 003594 601 RNLVAKISGLGLN 613 (808)
Q Consensus 601 ~~~~~kl~DfGla 613 (808)
++|.+.++||--+
T Consensus 237 ~dg~~~vIDwPQ~ 249 (304)
T COG0478 237 EDGDIVVIDWPQA 249 (304)
T ss_pred cCCCEEEEeCccc
Confidence 9999999999554
No 475
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.03 E-value=3.4e-05 Score=81.10 Aligned_cols=153 Identities=14% Similarity=0.090 Sum_probs=90.5
Q ss_pred CCceEEEEEEECCeEEEEEEccCCCCHHHHHHHHHHHhccC-CCCccceeecccc--ceEEEEeecCCCCHHHHHh----
Q 003594 473 GDWTNVYRGRLNHASVAIKTLNNGLSEEDFQAKVSFLTAVR-HPHLVAVMGCCSE--LKCIVFEYMPNGNLRDKLF---- 545 (808)
Q Consensus 473 G~~g~Vy~~~~~~~~vAiK~l~~~~~~~~~~~Ei~il~~l~-HpnIv~l~g~~~~--~~~lV~Ey~~~gsL~~~l~---- 545 (808)
..-..||+...++..+.||+..... ...+.+|+.++..+. +--+.+++++... ..++||||++|.+|.....
T Consensus 10 ~~~~~v~~~~~~~~~~~vk~~~~~~-~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~~~~~~~~ 88 (244)
T cd05150 10 QSGATVYRLDGKNPGLYLKIAPSGP-TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAALWEELEP 88 (244)
T ss_pred CCcCeEEEEcCCCCcEEEEecCCCc-ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhHhhcccCH
Confidence 3447899998877889999986432 446778999988884 3445577777654 5799999999987764421
Q ss_pred ------------hccccccccccCCCCC--HHHHHHH-----------------------HHHHHHHhhhhh-hcCCCCe
Q 003594 546 ------------TSQRNYKNCSRARALR--WLDRIHI-----------------------AHEVCLGLSFLH-STEPRPI 587 (808)
Q Consensus 546 ------------~~~~~~~~~~~~~~l~--~~~~~~i-----------------------~~qia~aL~yLH-~~~~~~i 587 (808)
...... ....++. +...... ..++...|.-.. ...+..+
T Consensus 89 ~~~~~~l~~~l~~lH~i~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l 165 (244)
T cd05150 89 ERLVDALAEALRRLHALP---VADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAEEDLVV 165 (244)
T ss_pred HHHHHHHHHHHHHHhcCC---cccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCcCceEE
Confidence 000000 0001111 0000000 111111111111 1123569
Q ss_pred EecCCCCCCcccCCCccEEEEeCCCcccCCCCcchhhHhHHHHHHHH
Q 003594 588 VHGSLTPSSILLDRNLVAKISGLGLNICDQLNVRSDIRAFGTLLLHL 634 (808)
Q Consensus 588 iHrDLKp~NILld~~~~~kl~DfGla~~~~~t~ksDVwS~Gvil~el 634 (808)
+|+|+.|.|||++.++...|+||+.+..+ .+ .|-|+.++..+
T Consensus 166 ~HgD~~~~Nil~~~~~~~~iIDwe~a~~g--dp---~~Dla~~~~~~ 207 (244)
T cd05150 166 THGDACLPNIIVDPGKFSGFIDLGRLGVA--DR---YQDLALAVRSL 207 (244)
T ss_pred ECCCCCCccEEEeCCcEEEEEEccccccc--cH---HHHHHHHHHHh
Confidence 99999999999999888899999987532 22 33456555444
No 476
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.03 E-value=1.8e-05 Score=81.66 Aligned_cols=144 Identities=18% Similarity=0.178 Sum_probs=84.5
Q ss_pred ccccCCceEEEEEEECCeEEEEEEccCCCCHHHHHHHHHHHhccCCC--Cccceeecccc-----ceEEEEeecCCCCHH
Q 003594 469 LKCAGDWTNVYRGRLNHASVAIKTLNNGLSEEDFQAKVSFLTAVRHP--HLVAVMGCCSE-----LKCIVFEYMPNGNLR 541 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~~~~~vAiK~l~~~~~~~~~~~Ei~il~~l~Hp--nIv~l~g~~~~-----~~~lV~Ey~~~gsL~ 541 (808)
.+++|..+.||+...++..+++|..........+.+|+.++..+... .+.+++.++.. ..+++|+|++|.++.
T Consensus 4 ~l~~G~~n~~~~v~~~~~~~vlK~~~~~~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~g~~~~ 83 (239)
T PF01636_consen 4 PLSGGFSNRVYRVTTDDGRYVLKFYRPPDAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIPGRPLD 83 (239)
T ss_dssp EEEESSSSEEEEEEETTSEEEEEEESSHHHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEESSEEHH
T ss_pred cCCCCCeeeEEEEEECCcEEEEEEeCCCCCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEecccccc
Confidence 35678888999999977899999987543456788999999888533 34566664422 468999999998887
Q ss_pred H----------------HHhhccccccccccCCCCCHHH---------HHHH------------HHHHHH-Hhhhhhh--
Q 003594 542 D----------------KLFTSQRNYKNCSRARALRWLD---------RIHI------------AHEVCL-GLSFLHS-- 581 (808)
Q Consensus 542 ~----------------~l~~~~~~~~~~~~~~~l~~~~---------~~~i------------~~qia~-aL~yLH~-- 581 (808)
. .+....... .....+.+.. .... ...+.. .+..++.
T Consensus 84 ~~~~~~~~~~~~~~~~~~l~~lh~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (239)
T PF01636_consen 84 DELSPEQRPELLRQLGRALAQLHQVP---PPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEALL 160 (239)
T ss_dssp HTSTHHHHHHHHHHHHHHHHHHHHSH---TTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccchhhhhhccccc---ccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHhhh
Confidence 7 111110000 0011111111 0000 111222 3333332
Q ss_pred --cCCCCeEecCCCCCCcccC-CCccEEEEeCCCccc
Q 003594 582 --TEPRPIVHGSLTPSSILLD-RNLVAKISGLGLNIC 615 (808)
Q Consensus 582 --~~~~~iiHrDLKp~NILld-~~~~~kl~DfGla~~ 615 (808)
..+..++|+|+.|.|||++ .++.+.|+||+.+..
T Consensus 161 ~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~ 197 (239)
T PF01636_consen 161 PKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW 197 (239)
T ss_dssp HCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred ccCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence 2346799999999999999 666678999998754
No 477
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.00 E-value=1.3e-06 Score=100.30 Aligned_cols=123 Identities=23% Similarity=0.344 Sum_probs=87.6
Q ss_pred HHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCccc---------------------------------
Q 003594 569 AHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC--------------------------------- 615 (808)
Q Consensus 569 ~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla~~--------------------------------- 615 (808)
+.+++.||.|+|... ++||++|.|++|.++.++.+||+.|+++..
T Consensus 105 l~~v~dgl~flh~sA--k~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~ 182 (700)
T KOG2137|consen 105 LGNVADGLAFLHRSA--KVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL 182 (700)
T ss_pred hhcccchhhhhccCc--ceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence 345569999999974 699999999999999999999999998632
Q ss_pred -CCCCcchhhHhHHHHHHHHHc-CCCCchhhHHHhhhcHHHHHH-HhccCCCCCChhhHHHHHHHHHHhhccCCCcCccc
Q 003594 616 -DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQ-VLDGNAGIWPLDLAEELAGIALKCLSADQDANRDL 692 (808)
Q Consensus 616 -~~~t~ksDVwS~Gvil~ellt-G~~P~~~~~~~~~~~~~~~~~-~ld~~~~~~p~~~~~~l~~Li~~Cl~~dp~p~~Rp 692 (808)
...++++|+||||+++|.+.. |++-+..... .....+.. ..+-....++..++.++.+=+.+++..+ +.-||
T Consensus 183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~---~~~~~~~~~~~~~~~~~~s~~~p~el~~~l~k~l~~~--~~~rp 257 (700)
T KOG2137|consen 183 GTTNTPASDVFSLGVLIYTIYNGGKSIIAANGG---LLSYSFSRNLLNAGAFGYSNNLPSELRESLKKLLNGD--SAVRP 257 (700)
T ss_pred cccccccccceeeeeEEEEEecCCcchhhccCC---cchhhhhhcccccccccccccCcHHHHHHHHHHhcCC--cccCc
Confidence 124689999999999999995 4443322110 01111111 1122233344678889999999999999 88899
Q ss_pred cHHhhH
Q 003594 693 RIAGVM 698 (808)
Q Consensus 693 s~~evl 698 (808)
++..+.
T Consensus 258 ~~~~l~ 263 (700)
T KOG2137|consen 258 TLDLLL 263 (700)
T ss_pred chhhhh
Confidence 766554
No 478
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=97.96 E-value=7.2e-05 Score=76.30 Aligned_cols=126 Identities=13% Similarity=0.140 Sum_probs=83.5
Q ss_pred cccccCCceEEEEEEECCeEEEEEEccCCCC-HH----------HHHHHHHHHhccCCC---Cccceeecc-------cc
Q 003594 468 RLKCAGDWTNVYRGRLNHASVAIKTLNNGLS-EE----------DFQAKVSFLTAVRHP---HLVAVMGCC-------SE 526 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~~~~~vAiK~l~~~~~-~~----------~~~~Ei~il~~l~Hp---nIv~l~g~~-------~~ 526 (808)
++........|.+-..+|..+++|..+.... .+ ...+.+..+.+++.. .+..++.+. ..
T Consensus 37 kv~k~~~r~~ValIei~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ekk~~~~~~ 116 (229)
T PF06176_consen 37 KVFKNTKRNYVALIEIDGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAAEKKIFRYTS 116 (229)
T ss_pred EeecCCCccEEEEEEECCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeeeeeeecccee
Confidence 3444455677888888999999999873221 11 123344444444322 222222222 22
Q ss_pred ceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEE
Q 003594 527 LKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAK 606 (808)
Q Consensus 527 ~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~k 606 (808)
..+|||||++|..|.+... ++. .+...|..+|.-||. .|++|+|..|+|++++.++ ++
T Consensus 117 ~~~ll~EYIeG~~l~d~~~--------------i~e----~~~~ki~~~ikqlH~---~G~~HGD~hpgNFlv~~~~-i~ 174 (229)
T PF06176_consen 117 SYVLLMEYIEGVELNDIED--------------IDE----DLAEKIVEAIKQLHK---HGFYHGDPHPGNFLVSNNG-IR 174 (229)
T ss_pred EEEEEEEEecCeecccchh--------------cCH----HHHHHHHHHHHHHHH---cCCccCCCCcCcEEEECCc-EE
Confidence 5578999999988876541 222 255677788999999 5599999999999998654 99
Q ss_pred EEeCCCccc
Q 003594 607 ISGLGLNIC 615 (808)
Q Consensus 607 l~DfGla~~ 615 (808)
++||+..+.
T Consensus 175 iID~~~k~~ 183 (229)
T PF06176_consen 175 IIDTQGKRM 183 (229)
T ss_pred EEECccccc
Confidence 999987765
No 479
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=97.91 E-value=5.2e-05 Score=74.10 Aligned_cols=126 Identities=17% Similarity=0.149 Sum_probs=90.0
Q ss_pred cccccCCceEEEEEEECCeEEEEEEccCCCCHHHHHHHHHHHhccCCCCccc-eeeccccceEEEEeecCCCCHHHHHhh
Q 003594 468 RLKCAGDWTNVYRGRLNHASVAIKTLNNGLSEEDFQAKVSFLTAVRHPHLVA-VMGCCSELKCIVFEYMPNGNLRDKLFT 546 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~~~~~vAiK~l~~~~~~~~~~~Ei~il~~l~HpnIv~-l~g~~~~~~~lV~Ey~~~gsL~~~l~~ 546 (808)
+.+++|++|.||+|.+.|..+|+|+-+.+.....+..|+++|..+.--++-. +|.|-. .++.|||+.|-+|.+.-..
T Consensus 28 ~~L~KG~~s~Vyl~~~~~~~~a~Kvrr~ds~r~~l~kEakiLeil~g~~~~p~vy~yg~--~~i~me~i~G~~L~~~~~~ 105 (201)
T COG2112 28 KELAKGTTSVVYLGEWRGGEVALKVRRRDSPRRNLEKEAKILEILAGEGVTPEVYFYGE--DFIRMEYIDGRPLGKLEIG 105 (201)
T ss_pred hhhhcccccEEEEeeccCceEEEEEecCCcchhhHHHHHHHHHHhhhcCCCceEEEech--hhhhhhhhcCcchhhhhhc
Confidence 4568999999999999999999999888888889999999999887655543 333322 3455999998888876621
Q ss_pred ccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCC-CCCcccCCCccEEEEeCCCccc
Q 003594 547 SQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLT-PSSILLDRNLVAKISGLGLNIC 615 (808)
Q Consensus 547 ~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLK-p~NILld~~~~~kl~DfGla~~ 615 (808)
. +-.+. ..++.. +|.=+. .||-|+.|. |..++|-.++.+.|+||..|+.
T Consensus 106 ~-------------~rk~l----~~vlE~-a~~LD~--~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~ 155 (201)
T COG2112 106 G-------------DRKHL----LRVLEK-AYKLDR--LGIEHGELSRPWKNVLVNDRDVYIIDFDSATF 155 (201)
T ss_pred c-------------cHHHH----HHHHHH-HHHHHH--hccchhhhcCCceeEEecCCcEEEEEccchhh
Confidence 1 22222 333333 333222 568898884 6666666666999999998874
No 480
>PRK10490 sensor protein KdpD; Provisional
Probab=97.89 E-value=5e-05 Score=94.47 Aligned_cols=125 Identities=13% Similarity=0.084 Sum_probs=93.1
Q ss_pred CCeEEEEecCCcccchhhHHHHhhhccCCCcEEEEEEEeccCCcCCcccCCCCCcCCCCCChHHHHHHHHHHHhhHHHHH
Q 003594 5 EPKVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHVTYNISIKDFVYTPFGKLPATSLSDEKLEILKKYEQGKTDNLL 84 (808)
Q Consensus 5 ~~~V~VAVd~s~~ss~~AL~WAl~n~~~~~~~ivLlHV~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll 84 (808)
.++|+|+|++++.+ .+++++|.+--.+-+..++.|||..+.. ...+.+ .++-+
T Consensus 250 ~eriLV~v~~~~~~-~~lIr~~~rlA~~~~a~~~~l~V~~~~~--------------~~~~~~------------~~~~l 302 (895)
T PRK10490 250 RDAILLCIGHNTGS-EKLVRTAARLAARLGSVWHAVYVETPRL--------------HRLPEK------------KRRAI 302 (895)
T ss_pred CCeEEEEECCCcch-HHHHHHHHHHHHhcCCCEEEEEEecCCc--------------CcCCHH------------HHHHH
Confidence 46899999999877 7799999876666667899999975421 011111 12334
Q ss_pred HHHHhhccCCCceEEEEEcCCccHHHHHHHHHHHhCCcEEEecccccCCCCCCccccCcccccccccCCCcceEEEEeC
Q 003594 85 SKYLGFCGKVKAEILKVEKSDEPVHKLILDLVSRLTITKLVMGLSFMIPSAGKSRTAVSGSYFVHHHMPDYCELFIICG 163 (808)
Q Consensus 85 ~~~~~~C~~~~v~~~~i~~~~~dv~~~I~e~i~~~~i~~LVmGs~~~g~~~~kr~~~~svs~yv~~~ap~~C~V~vv~k 163 (808)
..+..+|++.++++..+. ++||+++|+++|..++|+.||||.+.++.+ ...+|+.+.+.+.++ .-.|+||..
T Consensus 303 ~~~~~lA~~lGa~~~~~~--~~dva~~i~~~A~~~~vt~IViG~s~~~~~----~~~~s~~~~l~r~~~-~idi~iv~~ 374 (895)
T PRK10490 303 LSALRLAQELGAETATLS--DPAEEKAVLRYAREHNLGKIIIGRRASRRW----WRRESFADRLARLGP-DLDLVIVAL 374 (895)
T ss_pred HHHHHHHHHcCCEEEEEe--CCCHHHHHHHHHHHhCCCEEEECCCCCCCC----ccCCCHHHHHHHhCC-CCCEEEEeC
Confidence 455578999999966554 589999999999999999999999654433 224688888999997 578888853
No 481
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.85 E-value=7.1e-05 Score=78.29 Aligned_cols=148 Identities=13% Similarity=0.169 Sum_probs=80.1
Q ss_pred cCCceEEEEEEECCeEEEEEEccCCCCHHHHHHHHHHHhccCCC---Cccceeecccc-----ceEEEEeecCCCCHHHH
Q 003594 472 AGDWTNVYRGRLNHASVAIKTLNNGLSEEDFQAKVSFLTAVRHP---HLVAVMGCCSE-----LKCIVFEYMPNGNLRDK 543 (808)
Q Consensus 472 ~G~~g~Vy~~~~~~~~vAiK~l~~~~~~~~~~~Ei~il~~l~Hp---nIv~l~g~~~~-----~~~lV~Ey~~~gsL~~~ 543 (808)
+|....||+. +..+++|..+.......+.+|+.+|..+... .+..+++.... ..++||++++|.++.+.
T Consensus 8 gG~~n~vy~~---~~~~VlR~~~~~~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i~G~~l~~~ 84 (235)
T cd05155 8 GGTDNATFRL---GDDMSVRLPSAAGYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWLEGETATAA 84 (235)
T ss_pred CCcccceEEc---CCceEEEcCCccchHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEeecCCCCCcc
Confidence 4444569975 3457788876544556899999999887532 34444544432 34899999998766422
Q ss_pred ---------------Hhhccccc-ccccc-CC-------CC-CHHHHH--HHH-------HHHHHHh-h-hhhh--cCCC
Q 003594 544 ---------------LFTSQRNY-KNCSR-AR-------AL-RWLDRI--HIA-------HEVCLGL-S-FLHS--TEPR 585 (808)
Q Consensus 544 ---------------l~~~~~~~-~~~~~-~~-------~l-~~~~~~--~i~-------~qia~aL-~-yLH~--~~~~ 585 (808)
+..-.... ..... .. .+ .|.... .+. .+....+ . +++. ..+.
T Consensus 85 ~~~~~~~l~~~la~~l~~LH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 164 (235)
T cd05155 85 ALSDPSEFAEDLADFLAALRQIDPSGGPPAGRHNFLRGGDLAVRDAETREAIEALEGVIDVDAARALWEAALRAPWWGPP 164 (235)
T ss_pred ccCCHHHHHHHHHHHHHHHhCCCcccCCccCCccccCCCChhHhhHHHHHHHHHcccccChHHHHHHHHHHhcccccCCc
Confidence 11100000 00000 00 00 121111 000 0111111 1 1111 1335
Q ss_pred CeEecCCCCCCcccCCCccEEEEeCCCcccCCCCcchhh
Q 003594 586 PIVHGSLTPSSILLDRNLVAKISGLGLNICDQLNVRSDI 624 (808)
Q Consensus 586 ~iiHrDLKp~NILld~~~~~kl~DfGla~~~~~t~ksDV 624 (808)
.++|+|+.|.|||++.+...-|+||+.+..+ ++..|+
T Consensus 165 ~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~g--Dp~~Dl 201 (235)
T cd05155 165 VWFHGDLAPGNLLVQDGRLSAVIDFGCLGVG--DPACDL 201 (235)
T ss_pred eEEeCCCCCCcEEEECCCEEEEEeCcccCcC--ChHHHH
Confidence 6999999999999988777789999987543 444554
No 482
>PLN02876 acyl-CoA dehydrogenase
Probab=97.82 E-value=0.00015 Score=89.58 Aligned_cols=148 Identities=15% Similarity=0.189 Sum_probs=90.3
Q ss_pred cccccCCceEEEEEEECC----eEEEEEEccCC---CCHHHHHHHHHHHhccC-CCCc--cceeecccc-----ceEEEE
Q 003594 468 RLKCAGDWTNVYRGRLNH----ASVAIKTLNNG---LSEEDFQAKVSFLTAVR-HPHL--VAVMGCCSE-----LKCIVF 532 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~~~----~~vAiK~l~~~---~~~~~~~~Ei~il~~l~-HpnI--v~l~g~~~~-----~~~lV~ 532 (808)
..+++|.++.+|+..+.+ ..+++|+.... .....+.+|+.+|..+. |+++ .+++++|.+ ..|+||
T Consensus 44 ~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flVM 123 (822)
T PLN02876 44 SQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYIM 123 (822)
T ss_pred EEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEEE
Confidence 445678889999988743 46888886532 23457889999999995 6665 788888865 578999
Q ss_pred eecCCCCHHH--------------------HHhhccc-ccc---ccccCCCCCH--HHHHHH---------------HHH
Q 003594 533 EYMPNGNLRD--------------------KLFTSQR-NYK---NCSRARALRW--LDRIHI---------------AHE 571 (808)
Q Consensus 533 Ey~~~gsL~~--------------------~l~~~~~-~~~---~~~~~~~l~~--~~~~~i---------------~~q 571 (808)
||++|..+.+ .|..-.. ... ......+..+ .+...+ .-.
T Consensus 124 E~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g~~~~~~~~~l~~w~~~~~~~~~~~~~~~~~~ 203 (822)
T PLN02876 124 EYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDAIGLGKYGRRDNYCKRQVERWAKQYLASTGEGKPPRNPK 203 (822)
T ss_pred EecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchhcChhhcCCCCchHHHHHHHHHHHHHHhhcccCCCCChh
Confidence 9999764321 1111000 000 0000011111 111111 112
Q ss_pred HHHHhhhhhhcCC--------CCeEecCCCCCCcccCC-C-ccEEEEeCCCccc
Q 003594 572 VCLGLSFLHSTEP--------RPIVHGSLTPSSILLDR-N-LVAKISGLGLNIC 615 (808)
Q Consensus 572 ia~aL~yLH~~~~--------~~iiHrDLKp~NILld~-~-~~~kl~DfGla~~ 615 (808)
+...+.+|..+-| ..+||+|++|.|||++. + ..+-|.||+++..
T Consensus 204 ~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~ 257 (822)
T PLN02876 204 MLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGILDWELSTL 257 (822)
T ss_pred HHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEEeeecccc
Confidence 3344667765544 34999999999999974 2 3467999999865
No 483
>PRK10593 hypothetical protein; Provisional
Probab=97.78 E-value=0.00023 Score=77.28 Aligned_cols=72 Identities=7% Similarity=0.002 Sum_probs=55.3
Q ss_pred ccccCCceEEEEEEECCeEEEEEEccCCCCHHHHHHHHHHHhccCC---CCccceeeccc-----cceEEEEeecCCCCH
Q 003594 469 LKCAGDWTNVYRGRLNHASVAIKTLNNGLSEEDFQAKVSFLTAVRH---PHLVAVMGCCS-----ELKCIVFEYMPNGNL 540 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~~~~~vAiK~l~~~~~~~~~~~Ei~il~~l~H---pnIv~l~g~~~-----~~~~lV~Ey~~~gsL 540 (808)
-+|+|..+.||+....+..+.+|..+.......|..|...|+.|.- ..+.+++++|. +..+||||+++|+++
T Consensus 21 ~i~~G~~~~vy~~~~~~~~~~~k~~~~~~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVmE~i~G~~~ 100 (297)
T PRK10593 21 CISEQPYAALWALYDSQGNPMPLMARSFSTPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLLERLRGVSV 100 (297)
T ss_pred ecCCccceeEEEEEcCCCCEEEEEecccccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEEeccCCEec
Confidence 4577889999999875556778885443355689999999998853 36778888774 257999999998765
No 484
>PRK05231 homoserine kinase; Provisional
Probab=97.78 E-value=0.0022 Score=70.18 Aligned_cols=162 Identities=14% Similarity=0.192 Sum_probs=89.6
Q ss_pred cccCCceEEEEEEECCeEEEEEEccCCCCHHHHHHHHHHHhccCCCC--ccceeec--------cccceEEEEeecCCCC
Q 003594 470 KCAGDWTNVYRGRLNHASVAIKTLNNGLSEEDFQAKVSFLTAVRHPH--LVAVMGC--------CSELKCIVFEYMPNGN 539 (808)
Q Consensus 470 ~g~G~~g~Vy~~~~~~~~vAiK~l~~~~~~~~~~~Ei~il~~l~Hpn--Iv~l~g~--------~~~~~~lV~Ey~~~gs 539 (808)
+++|....+|+...++..+++|+.. ....+.+..|+.++..|...+ +.+.+.. ..+..+++++|++|..
T Consensus 30 l~~G~~n~~y~v~t~~g~~vLK~~~-~~~~~~l~~~~~~l~~L~~~glpvP~~i~~~~G~~~~~~~g~~~~l~~~l~G~~ 108 (319)
T PRK05231 30 IAEGIENSNFFLTTTQGEYVLTLFE-RLTAEDLPFFLGLMQHLAARGVPVPAPVARRDGAALGELAGKPAAIVTFLEGKW 108 (319)
T ss_pred hccccccceEEEEeCCCcEEEEEec-cCChHHhHHHHHHHHHHHHCCCCCCcceeCCCCCEeeeeCCEEEEEEEecCCCC
Confidence 3456667899988766689999886 334455556667666663222 3333321 1235689999999864
Q ss_pred HH-----------HHHh---hcccccccc-ccCCCCCH-HHHHH------------HHHH-HHHHhhhhhh----cCCCC
Q 003594 540 LR-----------DKLF---TSQRNYKNC-SRARALRW-LDRIH------------IAHE-VCLGLSFLHS----TEPRP 586 (808)
Q Consensus 540 L~-----------~~l~---~~~~~~~~~-~~~~~l~~-~~~~~------------i~~q-ia~aL~yLH~----~~~~~ 586 (808)
+. ..|. ......... .....+.| ..... .+.+ +...+..+-. .-|.+
T Consensus 109 ~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lp~~ 188 (319)
T PRK05231 109 PRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQAALLEAELAAQLAFLASAAWPALPRG 188 (319)
T ss_pred CCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhHHHHHHHHHHHHHHhhhccccccCCcc
Confidence 31 1111 111100000 01112222 11111 1111 1112233321 13578
Q ss_pred eEecCCCCCCcccCCCccEEEEeCCCcccCCCCcchhhHhHHHHHHHHHcC
Q 003594 587 IVHGSLTPSSILLDRNLVAKISGLGLNICDQLNVRSDIRAFGTLLLHLLTG 637 (808)
Q Consensus 587 iiHrDLKp~NILld~~~~~kl~DfGla~~~~~t~ksDVwS~Gvil~elltG 637 (808)
+||+|+.|.|||++.+...-|+||+.+..+. =+|=+++++..++..
T Consensus 189 liHgD~~~~Nil~~~~~~~~iIDf~~~~~~~-----~~~DlA~~~~~~~~~ 234 (319)
T PRK05231 189 VIHADLFRDNVLFEGDRLSGFIDFYFACNDK-----LLYDVAITLNDWCFE 234 (319)
T ss_pred cCCCCCCCCcEEEECCceEEEEecccccCCc-----hHHHHHHHHHHHHcc
Confidence 9999999999999977667899999885432 256667777655543
No 485
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.75 E-value=0.00044 Score=77.57 Aligned_cols=71 Identities=18% Similarity=0.108 Sum_probs=54.6
Q ss_pred ccccCCceEEEEEEEC-C-eEEEEEEccC---------CCCHHHHHHHHHHHhccC---CCCccceeeccccceEEEEee
Q 003594 469 LKCAGDWTNVYRGRLN-H-ASVAIKTLNN---------GLSEEDFQAKVSFLTAVR---HPHLVAVMGCCSELKCIVFEY 534 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~~-~-~~vAiK~l~~---------~~~~~~~~~Ei~il~~l~---HpnIv~l~g~~~~~~~lV~Ey 534 (808)
-+|+|.+..||++... | +.|+||.-.+ ....+.+..|.+.|..+. ..++.+++.+..+..++||||
T Consensus 33 elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D~~~~~lVME~ 112 (401)
T PRK09550 33 EIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYDEELAVTVMED 112 (401)
T ss_pred EcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEECCCCCEEEEec
Confidence 4578999999999994 4 4899998541 124567788988888763 356788888888888999999
Q ss_pred cCCCC
Q 003594 535 MPNGN 539 (808)
Q Consensus 535 ~~~gs 539 (808)
+++..
T Consensus 113 L~~~~ 117 (401)
T PRK09550 113 LSDHK 117 (401)
T ss_pred CCCcc
Confidence 98743
No 486
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.71 E-value=0.00028 Score=73.59 Aligned_cols=159 Identities=10% Similarity=0.108 Sum_probs=90.5
Q ss_pred cccCCceEEEEEEEC---CeEEEEEEccCCCCH-HHHHHHHHHHhccCC-CCccceeeccccceEEEEeecCCCCHHHH-
Q 003594 470 KCAGDWTNVYRGRLN---HASVAIKTLNNGLSE-EDFQAKVSFLTAVRH-PHLVAVMGCCSELKCIVFEYMPNGNLRDK- 543 (808)
Q Consensus 470 ~g~G~~g~Vy~~~~~---~~~vAiK~l~~~~~~-~~~~~Ei~il~~l~H-pnIv~l~g~~~~~~~lV~Ey~~~gsL~~~- 543 (808)
+.+|-...+|+.... +..|++|+....... -...+|+.++..+.. .-..++++.+. ..+||||++|.++...
T Consensus 6 l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~~~d~~~E~~~~~~l~~~gl~P~v~~~~~--~~~l~e~i~G~~l~~~~ 83 (235)
T cd05157 6 FTGGITNKLVKVSNKEDNQDAVLVRVYGNKTELIIDRERELRIHKLLSKHGLAPKLYATFQ--NGLIYEFIPGRTLEPED 83 (235)
T ss_pred cCCcccceEEEEEcCCCCCCeEEEEEccCCccceecHHHHHHHHHHHHhCCCCCeEEEEeC--CcEEEEeeCCCcCCHHH
Confidence 456777899999875 578999987632211 233578989988853 33445555443 3589999998765321
Q ss_pred -------------Hhhccccccccc-----cCCCCCHHHHHHHHH-------------------------HHHHHhh-hh
Q 003594 544 -------------LFTSQRNYKNCS-----RARALRWLDRIHIAH-------------------------EVCLGLS-FL 579 (808)
Q Consensus 544 -------------l~~~~~~~~~~~-----~~~~l~~~~~~~i~~-------------------------qia~aL~-yL 579 (808)
|........... ....-.|..+..+.. +.+..|. .+
T Consensus 84 ~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l 163 (235)
T cd05157 84 LRNPKIYRLIARELAKLHSIKPPEAISSPGTPKPILWPTIRKWINLVPTEFKKPEKFQKKTKAISFEQLRDEISWLKELL 163 (235)
T ss_pred ccChHHHHHHHHHHHHHhcccccccccccCCCCCcHHHHHHHHHHHhHHhhccccchhhhhccccHHHHHHHHHHHHHHh
Confidence 111000000000 001111222222211 1111111 11
Q ss_pred hhc-CCCCeEecCCCCCCcccCC-CccEEEEeCCCcccCCCCcchhhHhHHHHHHHHH
Q 003594 580 HST-EPRPIVHGSLTPSSILLDR-NLVAKISGLGLNICDQLNVRSDIRAFGTLLLHLL 635 (808)
Q Consensus 580 H~~-~~~~iiHrDLKp~NILld~-~~~~kl~DfGla~~~~~t~ksDVwS~Gvil~ell 635 (808)
-.. .+..++|+|+.|.|||++. ++.+.|+||..|..+.. .|=+|+++.|+.
T Consensus 164 ~~~~~~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~~~~~-----~~Dla~~~~e~~ 216 (235)
T cd05157 164 SALNSPIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAGYNYR-----AFDIANHFNEWA 216 (235)
T ss_pred cccCCCEEEEcCCCCcCcEEEeCCCCCEEEEEcccCCcCch-----heeHHHHHHHHc
Confidence 111 3357999999999999997 57899999988864322 355788888865
No 487
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=97.69 E-value=0.00015 Score=74.78 Aligned_cols=132 Identities=17% Similarity=0.176 Sum_probs=84.9
Q ss_pred ccccCCceEEEEEEE-CCeEEEEEEccCCCCH-----------HH---------------HHHHHHHHhccC--CCCccc
Q 003594 469 LKCAGDWTNVYRGRL-NHASVAIKTLNNGLSE-----------ED---------------FQAKVSFLTAVR--HPHLVA 519 (808)
Q Consensus 469 i~g~G~~g~Vy~~~~-~~~~vAiK~l~~~~~~-----------~~---------------~~~Ei~il~~l~--HpnIv~ 519 (808)
.++.|--+.||+|.. ++..||||+.+..... .. ...|+.-|.++. +-.+.+
T Consensus 55 ~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP~ 134 (268)
T COG1718 55 CISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVPE 134 (268)
T ss_pred eecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 456777889999987 6899999998722110 01 124555555552 222333
Q ss_pred eeeccccceEEEEeecCCCCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCccc
Q 003594 520 VMGCCSELKCIVFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILL 599 (808)
Q Consensus 520 l~g~~~~~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILl 599 (808)
-+++. ...|||||+....+. -|.-...++.......+..+++..+.-|-.. -++||+||+.=|||+
T Consensus 135 Pi~~~--~nVLvMEfIg~~g~p----------AP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~--a~LVHgDLSEyNiL~ 200 (268)
T COG1718 135 PIAFR--NNVLVMEFIGDDGLP----------APRLKDVPLELEEAEGLYEDVVEYMRRLYKE--AGLVHGDLSEYNILV 200 (268)
T ss_pred ceeec--CCeEEEEeccCCCCC----------CCCcccCCcCchhHHHHHHHHHHHHHHHHHh--cCcccccchhhheEE
Confidence 33332 347999999643100 0001222333335677788888888777662 259999999999999
Q ss_pred CCCccEEEEeCCCccc
Q 003594 600 DRNLVAKISGLGLNIC 615 (808)
Q Consensus 600 d~~~~~kl~DfGla~~ 615 (808)
. ++.+.|+|||-|..
T Consensus 201 ~-~~~p~iID~~QaV~ 215 (268)
T COG1718 201 H-DGEPYIIDVSQAVT 215 (268)
T ss_pred E-CCeEEEEECccccc
Confidence 8 88999999998754
No 488
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.67 E-value=0.00076 Score=73.53 Aligned_cols=164 Identities=12% Similarity=0.175 Sum_probs=94.5
Q ss_pred ccccccCCceEEEEEEECCeEEEEEEccCCCCHHHHHHHHHHHhccCCC--Cccceeeccc--------cceEEEEeecC
Q 003594 467 FRLKCAGDWTNVYRGRLNHASVAIKTLNNGLSEEDFQAKVSFLTAVRHP--HLVAVMGCCS--------ELKCIVFEYMP 536 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~~~~~~~~vAiK~l~~~~~~~~~~~Ei~il~~l~Hp--nIv~l~g~~~--------~~~~lV~Ey~~ 536 (808)
.+.+++|....+|+...++..+++|+.+.......+..|+.++..|... .+.+++.... +..++||+|++
T Consensus 27 i~~~~~G~~n~~y~v~t~~~~~vLK~~~~~~~~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~~~~l~e~i~ 106 (307)
T TIGR00938 27 LKGIAEGVENSNYLLTTDVGRYILTLYEKRVKAEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGKPACLVEFLQ 106 (307)
T ss_pred ccccCCccccceEEEEeCCCcEEEEEecCCCCHHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCeEEEEEEeCC
Confidence 3455566557899988766678899876544456677788888777422 2444444322 25689999999
Q ss_pred CCCHH-----------HH---HhhccccccccccC--CCCCHHHHHH------------HHHHHHHHhhhhhh----cCC
Q 003594 537 NGNLR-----------DK---LFTSQRNYKNCSRA--RALRWLDRIH------------IAHEVCLGLSFLHS----TEP 584 (808)
Q Consensus 537 ~gsL~-----------~~---l~~~~~~~~~~~~~--~~l~~~~~~~------------i~~qia~aL~yLH~----~~~ 584 (808)
|.++. .. ++.....+...... ..-.|..... ....+...+.++.. ..|
T Consensus 107 G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l~~~~~~~~~ 186 (307)
T TIGR00938 107 GLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYLDKFWPRDLP 186 (307)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHHHhhhhhcCC
Confidence 85432 11 11111100000000 0112221110 11123344555543 335
Q ss_pred CCeEecCCCCCCcccCCCccEEEEeCCCcccCCCCcchhhHhHHHHHHHHH
Q 003594 585 RPIVHGSLTPSSILLDRNLVAKISGLGLNICDQLNVRSDIRAFGTLLLHLL 635 (808)
Q Consensus 585 ~~iiHrDLKp~NILld~~~~~kl~DfGla~~~~~t~ksDVwS~Gvil~ell 635 (808)
.+++|+|+.+.||+++.++...|+||+.+..+ --+|-|+.++..++
T Consensus 187 ~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~~~-----~~~~DLA~~~~~~~ 232 (307)
T TIGR00938 187 RGVIHADLFPDNVLFDGDSVKGVIDFYFACTD-----ARAYDLAITVNAWC 232 (307)
T ss_pred CccCCCCCCcCcEEEECCceEEEeecccccCc-----chHHHHHHHHHHHH
Confidence 78999999999999999887899999987543 23555666654444
No 489
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.59 E-value=0.00022 Score=75.62 Aligned_cols=152 Identities=11% Similarity=0.038 Sum_probs=86.9
Q ss_pred cCCceEEEEEEECCeEEEEEEccCCCCH--HHHHHHHHHHhccCCCCc-cceeeccccceEEEEeecCCCCHHH------
Q 003594 472 AGDWTNVYRGRLNHASVAIKTLNNGLSE--EDFQAKVSFLTAVRHPHL-VAVMGCCSELKCIVFEYMPNGNLRD------ 542 (808)
Q Consensus 472 ~G~~g~Vy~~~~~~~~vAiK~l~~~~~~--~~~~~Ei~il~~l~HpnI-v~l~g~~~~~~~lV~Ey~~~gsL~~------ 542 (808)
+|-.+.+|+...++..+++|........ -...+|..++..+..-.+ .++++.+. .++||||++|..+..
T Consensus 6 ~G~tn~~y~~~~~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~~--~~~v~e~i~G~~~~~~~~~~~ 83 (256)
T TIGR02721 6 GGLTNRSWRIEHPGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVNE--HWLLVEWLEGEVITLDQFVAL 83 (256)
T ss_pred CcCcCCeEEEEeCCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEeC--CEEEEEeccCcccccccccCc
Confidence 5777889999888889999986532221 246789999998864333 34455443 479999999866532
Q ss_pred --------HHhhccccccccccCCCCCHHHH-HHHHHHH---------HHHhhhhhh-----cCCCCeEecCCCCCCccc
Q 003594 543 --------KLFTSQRNYKNCSRARALRWLDR-IHIAHEV---------CLGLSFLHS-----TEPRPIVHGSLTPSSILL 599 (808)
Q Consensus 543 --------~l~~~~~~~~~~~~~~~l~~~~~-~~i~~qi---------a~aL~yLH~-----~~~~~iiHrDLKp~NILl 599 (808)
.+..-.... ....+++.... ..+..++ ...+..+-. ..+..++|+|+.|.||++
T Consensus 84 ~~~~~la~~l~~lH~~~---~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~Nil~ 160 (256)
T TIGR02721 84 DLLLELAALLHQLHSQP---RFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYNLVV 160 (256)
T ss_pred hhHHHHHHHHHHHhCCC---CCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCcEEE
Confidence 111110000 01112222211 1111111 111111111 123469999999999999
Q ss_pred CCCccEEEEeCCCcccCCCCcchhhHhHHHHHHHH
Q 003594 600 DRNLVAKISGLGLNICDQLNVRSDIRAFGTLLLHL 634 (808)
Q Consensus 600 d~~~~~kl~DfGla~~~~~t~ksDVwS~Gvil~el 634 (808)
+.++ +.|+||+.+..+ ++. |-||.++.+.
T Consensus 161 ~~~~-~~lIDwE~a~~g--dp~---~DLa~~~~~~ 189 (256)
T TIGR02721 161 TPQG-LKLIDWEYASDG--DIA---LELAAIIRAN 189 (256)
T ss_pred eCCC-CEEEeccccCcC--CHH---HHHHHHHHhC
Confidence 9877 789999988543 333 3446555543
No 490
>COG2205 KdpD Osmosensitive K+ channel histidine kinase [Signal transduction mechanisms]
Probab=97.59 E-value=0.00024 Score=83.30 Aligned_cols=130 Identities=17% Similarity=0.090 Sum_probs=98.1
Q ss_pred CCeEEEEecCCcccchhhHHHHhhhccCCCcEEEEEEEeccCCcCCcccCCCCCcCCCCCChHHHHHHHHHHHhhHHHHH
Q 003594 5 EPKVYVAVGNDLQDGYRTLDWTIRKWKAQSISIVILHVTYNISIKDFVYTPFGKLPATSLSDEKLEILKKYEQGKTDNLL 84 (808)
Q Consensus 5 ~~~V~VAVd~s~~ss~~AL~WAl~n~~~~~~~ivLlHV~~~~~~~~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ll 84 (808)
.++|+|+|+.+..+ -..++||-+--.+-+.....|||-.|.. + ..+ +..++.+
T Consensus 248 ~e~ilvcI~~~~~~-e~liR~a~RlA~~~~a~~~av~v~~~~~-----~---------~~~------------~~~~~~l 300 (890)
T COG2205 248 RERILVCISGSPGS-EKLIRRAARLASRLHAKWTAVYVETPEL-----H---------RLS------------EKEARRL 300 (890)
T ss_pred cceEEEEECCCCch-HHHHHHHHHHHHHhCCCeEEEEEecccc-----c---------ccc------------HHHHHHH
Confidence 37999999999888 6689999765555556689999975532 0 011 1124566
Q ss_pred HHHHhhccCCCceEEEEEcCCccHHHHHHHHHHHhCCcEEEecccccCCCCCCccccCcccccccccCCCcceEEEEeCC
Q 003594 85 SKYLGFCGKVKAEILKVEKSDEPVHKLILDLVSRLTITKLVMGLSFMIPSAGKSRTAVSGSYFVHHHMPDYCELFIICGG 164 (808)
Q Consensus 85 ~~~~~~C~~~~v~~~~i~~~~~dv~~~I~e~i~~~~i~~LVmGs~~~g~~~~kr~~~~svs~yv~~~ap~~C~V~vv~kg 164 (808)
.....+|+.-+.++.++. ++|++++|++|+..+++++||||-+.+.+| ++.+.++..+++.++++ .-.|++|..+
T Consensus 301 ~~~~~Lae~lGae~~~l~--~~dv~~~i~~ya~~~~~TkiViG~~~~~rw--~~~~~~~l~~~L~~~~~-~idv~ii~~~ 375 (890)
T COG2205 301 HENLRLAEELGAEIVTLY--GGDVAKAIARYAREHNATKIVIGRSRRSRW--RRLFKGSLADRLAREAP-GIDVHIVALD 375 (890)
T ss_pred HHHHHHHHHhCCeEEEEe--CCcHHHHHHHHHHHcCCeeEEeCCCcchHH--HHHhcccHHHHHHhcCC-CceEEEeeCC
Confidence 777788888999988876 489999999999999999999999665555 55666888888888887 5677777655
Q ss_pred eE
Q 003594 165 KL 166 (808)
Q Consensus 165 k~ 166 (808)
..
T Consensus 376 ~~ 377 (890)
T COG2205 376 AP 377 (890)
T ss_pred CC
Confidence 44
No 491
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.50 E-value=0.0012 Score=71.34 Aligned_cols=162 Identities=13% Similarity=0.185 Sum_probs=95.2
Q ss_pred cccccCCceEEEEEEECCeEEEEEEccCCCCHHHHHHHHHHHhccCCCC--ccceeecc--------ccceEEEEeecCC
Q 003594 468 RLKCAGDWTNVYRGRLNHASVAIKTLNNGLSEEDFQAKVSFLTAVRHPH--LVAVMGCC--------SELKCIVFEYMPN 537 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~~~~~vAiK~l~~~~~~~~~~~Ei~il~~l~Hpn--Iv~l~g~~--------~~~~~lV~Ey~~~ 537 (808)
+.+.+|....+|+...++..+++|+... .....+..|+.++..+.+-+ +.+++... .+..++||+|++|
T Consensus 20 ~~i~~G~~n~~y~v~~~~~~~vLr~~~~-~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~~i~G 98 (296)
T cd05153 20 EGISAGIENTNYFVTTDSGRYVLTLFEK-VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVEFLAG 98 (296)
T ss_pred ecccCccccceEEEEeCCCcEEEEEcCC-CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEEeCCC
Confidence 3445566688999888777899999875 45567788888888885332 44554432 2245799999998
Q ss_pred CCHHH-----------H---Hhhcccccccc-ccCCCCCHHHHHH----------HHHHHHHHhhhhhh----cCCCCeE
Q 003594 538 GNLRD-----------K---LFTSQRNYKNC-SRARALRWLDRIH----------IAHEVCLGLSFLHS----TEPRPIV 588 (808)
Q Consensus 538 gsL~~-----------~---l~~~~~~~~~~-~~~~~l~~~~~~~----------i~~qia~aL~yLH~----~~~~~ii 588 (808)
.++.. . |+......... .......|..... ....+..++.++-. ..|.+++
T Consensus 99 ~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~l~ 178 (296)
T cd05153 99 EHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLPRGVI 178 (296)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCCCcCC
Confidence 66432 1 11110000000 0111223332210 11123334445443 2346799
Q ss_pred ecCCCCCCcccCCCccEEEEeCCCcccCCCCcchhhHhHHHHHHHHH
Q 003594 589 HGSLTPSSILLDRNLVAKISGLGLNICDQLNVRSDIRAFGTLLLHLL 635 (808)
Q Consensus 589 HrDLKp~NILld~~~~~kl~DfGla~~~~~t~ksDVwS~Gvil~ell 635 (808)
|+|+.|.|||++.++.+.|+||+.+..+ --+|=|+.++..++
T Consensus 179 HgD~~~~Nil~~~~~~~~iIDfe~a~~g-----~~~~Dla~~~~~~~ 220 (296)
T cd05153 179 HADLFRDNVLFDGDELSGVIDFYFACTD-----AFLYDLAITLNDWC 220 (296)
T ss_pred ccCcCcccEEEeCCceEEEeehhhhcCc-----hHHHHHHHHHHHHH
Confidence 9999999999999888899999987543 12444555554433
No 492
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.29 E-value=0.0064 Score=65.99 Aligned_cols=159 Identities=13% Similarity=0.121 Sum_probs=92.6
Q ss_pred ccCCceEEEEEEEC--------CeEEEEEEccCCC-CHHHHHHHHHHHhccCCCC-ccceeeccccceEEEEeecCCCCH
Q 003594 471 CAGDWTNVYRGRLN--------HASVAIKTLNNGL-SEEDFQAKVSFLTAVRHPH-LVAVMGCCSELKCIVFEYMPNGNL 540 (808)
Q Consensus 471 g~G~~g~Vy~~~~~--------~~~vAiK~l~~~~-~~~~~~~Ei~il~~l~Hpn-Iv~l~g~~~~~~~lV~Ey~~~gsL 540 (808)
.+|-...||+.... +..+++|+..... ......+|..++..+...+ ..++++++.+ .+|++|++|.++
T Consensus 7 ~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~--~~v~e~i~G~~l 84 (302)
T cd05156 7 SGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVELLIDRERELVVFARLSERNLGPKLYGIFPN--GRIEEFIPSRTL 84 (302)
T ss_pred cCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcceechHHHHHHHHHHHhCCCCCceEEEeCC--CchhheeCCCcC
Confidence 34666789998874 4789999976432 2245678888888885333 3456666653 468999998776
Q ss_pred HHH--------------Hhhcccccccc-c-c--CCCCCHHHHHH--------------------------HHHHHHHHh
Q 003594 541 RDK--------------LFTSQRNYKNC-S-R--ARALRWLDRIH--------------------------IAHEVCLGL 576 (808)
Q Consensus 541 ~~~--------------l~~~~~~~~~~-~-~--~~~l~~~~~~~--------------------------i~~qia~aL 576 (808)
... |.......... . . ..+.-|..... +...+..-+
T Consensus 85 ~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (302)
T cd05156 85 TTEELRDPDISAEIARRMAKLHSIVVPLSPEERDLTPAIWKLLKQWLDLAETVIEIVDSDSEKLLEVELSLFLEDEAKYL 164 (302)
T ss_pred CHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcCcccchHHHHHHHHHHHhhhhhhhcccchhhhhhhhHHHHHHHHHHHH
Confidence 432 11000000000 0 0 01111111111 112222334
Q ss_pred hhhhh------cCCCCeEecCCCCCCcccCCC----ccEEEEeCCCcccCCCCcchhhHhHHHHHHHHHc
Q 003594 577 SFLHS------TEPRPIVHGSLTPSSILLDRN----LVAKISGLGLNICDQLNVRSDIRAFGTLLLHLLT 636 (808)
Q Consensus 577 ~yLH~------~~~~~iiHrDLKp~NILld~~----~~~kl~DfGla~~~~~t~ksDVwS~Gvil~ellt 636 (808)
.+|-. ..+..++|+|+.|.|||++.+ +.+.++||..|..+ .+. |=+|.++.|+..
T Consensus 165 ~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~~~--~p~---~DlA~~~~e~~~ 229 (302)
T cd05156 165 RFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYASYN--YRG---FDIANHFCEWMY 229 (302)
T ss_pred HHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCCCC--CcH---HHHHHHHHHHHh
Confidence 44432 245689999999999999874 88999999998543 333 446777777653
No 493
>KOG2042 consensus Ubiquitin fusion degradation protein-2 [Posttranslational modification, protein turnover, chaperones]
Probab=97.29 E-value=0.0003 Score=84.22 Aligned_cols=75 Identities=24% Similarity=0.452 Sum_probs=69.3
Q ss_pred CCCCCccccccccccccCCCcccC-CCcchhhHHHHHHHcCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHhcCC
Q 003594 730 SNDVPSVFICPIFQEVMKTPHVAA-DGFSYELEAMEEWLGMGHDTSPMTNLRLKHKYLTPNHTLRSLIQEWHNKQSS 805 (808)
Q Consensus 730 s~~~Ps~f~cPI~~evm~dP~v~~-dg~tye~~ai~~wl~~~~~tsP~t~~~l~~~~l~pN~~l~~~i~~~~~~~~~ 805 (808)
-..+|.+|..|++..+|.||++.+ .|.+.+|+.|++++-+ ..|+|.-+.+|....++||-+||..|+.|..+...
T Consensus 864 l~dvpdef~DPlm~Tlm~dPV~LP~Srv~vDRsti~rhlLs-~~tdPFNR~pLt~d~v~pn~eLK~kI~~~~~ek~~ 939 (943)
T KOG2042|consen 864 LGDVPDEFLDPLMSTLMSDPVVLPSSRVTVDRSTIERHLLS-DCTDPFNREPLTEDMVSPNEELKAKIRCWIKEKRN 939 (943)
T ss_pred hccCchhhhCccccccCCCCccCCcccccccHHHHHHHHhc-CCCCccccccCchhhcCCCHHHHHHHHHHHHHhhh
Confidence 355999999999999999999998 9999999999999975 68999999999999999999999999999976654
No 494
>PLN02756 S-methyl-5-thioribose kinase
Probab=97.28 E-value=0.0064 Score=68.12 Aligned_cols=77 Identities=21% Similarity=0.159 Sum_probs=55.8
Q ss_pred cccccCCceEEEEEEECCeEEEEEEcc-----CC----CCHHHHHHHHHHHhccC---CCCccceeeccccceEEEEeec
Q 003594 468 RLKCAGDWTNVYRGRLNHASVAIKTLN-----NG----LSEEDFQAKVSFLTAVR---HPHLVAVMGCCSELKCIVFEYM 535 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~~~~~vAiK~l~-----~~----~~~~~~~~Ei~il~~l~---HpnIv~l~g~~~~~~~lV~Ey~ 535 (808)
+-+|+|....||+....+..|+||.-. .. ....+-..|...|..+. ..++.+++.+|.+..+++|||+
T Consensus 38 ~eiggGn~N~VyrV~~~~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~ded~~vlvME~L 117 (418)
T PLN02756 38 KEVGDGNLNFVYIVVSSSGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDRTMALIGMRYL 117 (418)
T ss_pred EEcCCCceeeEEEEEcCCccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECCCCCEEEEeec
Confidence 345778889999998877789999865 11 13344555677776653 3578899999999999999999
Q ss_pred CC--CCHHHHH
Q 003594 536 PN--GNLRDKL 544 (808)
Q Consensus 536 ~~--gsL~~~l 544 (808)
++ ..|.+.+
T Consensus 118 ~~~~~ilr~~L 128 (418)
T PLN02756 118 EPPHIILRKGL 128 (418)
T ss_pred CCcceehhhhh
Confidence 76 3455544
No 495
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=96.96 E-value=0.0076 Score=61.26 Aligned_cols=123 Identities=17% Similarity=0.217 Sum_probs=83.4
Q ss_pred cccccCCceEEEEEEECCeEEEEEEccCCC------------------CHHHHHHHHHHHhccC------CCCccceeec
Q 003594 468 RLKCAGDWTNVYRGRLNHASVAIKTLNNGL------------------SEEDFQAKVSFLTAVR------HPHLVAVMGC 523 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~~~~~vAiK~l~~~~------------------~~~~~~~Ei~il~~l~------HpnIv~l~g~ 523 (808)
.++|+|+.-.||.-- ++...+||+..... ...++.+|+.-...+. +.+|.+++|+
T Consensus 7 ~~i~~G~~R~cy~HP-~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~G~ 85 (199)
T PF10707_consen 7 DLIAQGGERDCYQHP-DDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFYGF 85 (199)
T ss_pred cccccCCCceEEECC-CCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEeEE
Confidence 457888888888643 34567789887433 2456777777666665 8889999999
Q ss_pred ccc--ceEEEEeecCC------CCHHHHHhhccccccccccCCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCC
Q 003594 524 CSE--LKCIVFEYMPN------GNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPS 595 (808)
Q Consensus 524 ~~~--~~~lV~Ey~~~------gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~ 595 (808)
... ...+|+|.+.+ -+|.+++.. ..++. .....+.+ -..||-.+ .|+.+||+|.
T Consensus 86 veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~-----------~~~~~-~~~~~L~~---f~~~l~~~---~Iv~~dl~~~ 147 (199)
T PF10707_consen 86 VETNLGLGLVVELIRDADGNISPTLEDYLKE-----------GGLTE-ELRQALDE---FKRYLLDH---HIVIRDLNPH 147 (199)
T ss_pred EecCCceEEEEEEEECCCCCcCccHHHHHHc-----------CCccH-HHHHHHHH---HHHHHHHc---CCeecCCCcc
Confidence 876 66788887743 368888832 23544 33333333 34556663 4999999999
Q ss_pred CcccCCC---c-cEEEEe
Q 003594 596 SILLDRN---L-VAKISG 609 (808)
Q Consensus 596 NILld~~---~-~~kl~D 609 (808)
||++..+ . .+.|+|
T Consensus 148 NIv~~~~~~~~~~lvlID 165 (199)
T PF10707_consen 148 NIVVQRRDSGEFRLVLID 165 (199)
T ss_pred cEEEEecCCCceEEEEEe
Confidence 9999533 2 677887
No 496
>COG5113 UFD2 Ubiquitin fusion degradation protein 2 [Posttranslational modification, protein turnover, chaperones]
Probab=96.95 E-value=0.0033 Score=71.02 Aligned_cols=78 Identities=26% Similarity=0.425 Sum_probs=69.9
Q ss_pred CCCCCCccccccccccccCCCccc-CCCcchhhHHHHHHHcCCCCCCCCCCCCCCCCCCCccHHHHHHHHHHHHhcCCCC
Q 003594 729 DSNDVPSVFICPIFQEVMKTPHVA-ADGFSYELEAMEEWLGMGHDTSPMTNLRLKHKYLTPNHTLRSLIQEWHNKQSSVH 807 (808)
Q Consensus 729 ~s~~~Ps~f~cPI~~evm~dP~v~-~dg~tye~~ai~~wl~~~~~tsP~t~~~l~~~~l~pN~~l~~~i~~~~~~~~~~~ 807 (808)
.-+.+|++|..|+...+|.||++. +++.+.+|+.|..++-+ ..|+|..+.||.-...+||-+||..|-.|..+.+.-|
T Consensus 847 D~GDvPDeFlDPLmftimkdPV~Lp~S~i~IDRSTikahlls-d~tDPFNRmPLtlddVtpn~eLrekIn~f~k~k~~KH 925 (929)
T COG5113 847 DMGDVPDEFLDPLMFTIMKDPVKLPTSRITIDRSTIKAHLLS-DGTDPFNRMPLTLDDVTPNAELREKINRFYKCKGQKH 925 (929)
T ss_pred hccCCchhhhCchhhhcccCCeecccccccccHHHHHHHHhc-CCCCccccCCCchhhcCCCHHHHHHHHHHHhcccccc
Confidence 457899999999999999999986 58889999999999864 6899999999999999999999999999987766543
No 497
>PRK06148 hypothetical protein; Provisional
Probab=96.94 E-value=0.033 Score=70.44 Aligned_cols=163 Identities=13% Similarity=0.153 Sum_probs=90.2
Q ss_pred cccccCCceEEEEEEE-CCeEEEEEEccCCCCHHHHHHHHHHHhccC--CCCc--cceeec--------cc--c---ceE
Q 003594 468 RLKCAGDWTNVYRGRL-NHASVAIKTLNNGLSEEDFQAKVSFLTAVR--HPHL--VAVMGC--------CS--E---LKC 529 (808)
Q Consensus 468 ~i~g~G~~g~Vy~~~~-~~~~vAiK~l~~~~~~~~~~~Ei~il~~l~--HpnI--v~l~g~--------~~--~---~~~ 529 (808)
+.++ |..-.+|+... +|..+++|+.+..........|..+|..|. ++.+ .+++-. .. + ..+
T Consensus 31 ~~L~-s~~d~nf~v~~~~g~~yVLKi~~~~~~~~~~~~q~~~L~hL~~~~~glpvP~~i~t~~G~~~~~v~~~~G~~~~v 109 (1013)
T PRK06148 31 TPLD-GERDLNFRLTTDDGADYILKIVNPSEPRVESDFQTAALDHLAAVAPDLPVPRLIPSLSGASLASAQDPDGEPRLL 109 (1013)
T ss_pred eecC-CcCCceEEEEeCCCCeEEEEEcCCccchhHHHHHHHHHHHHHhhCCCCCcCeeeecCCCCeEEEeecCCCceEEE
Confidence 4454 44677899887 567899999986555555566666776552 2222 222211 11 1 346
Q ss_pred EEEeecCCCCHHHH-----------------HhhccccccccccCCCCCHHH-----------------HHHHHHHHHHH
Q 003594 530 IVFEYMPNGNLRDK-----------------LFTSQRNYKNCSRARALRWLD-----------------RIHIAHEVCLG 575 (808)
Q Consensus 530 lV~Ey~~~gsL~~~-----------------l~~~~~~~~~~~~~~~l~~~~-----------------~~~i~~qia~a 575 (808)
-+|+|++|..|.+. ++..-...........+.|.. ...++.++...
T Consensus 110 rLl~~l~G~~l~~~~~~t~~~~~~lG~~larlh~al~~F~~p~~~r~~~Wdl~~~~~l~~~l~~i~d~~~r~~l~~~~~~ 189 (1013)
T PRK06148 110 RLLSWLPGTPLAEAAPRTEALLDNLGRALGRLDRALQGFMHPGALRDLDWDLRHAGRARDRLHFIDDPEDRALVERFLAR 189 (1013)
T ss_pred EEEeccCCCcHHhccCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccccchhhhhhhhhcCCHHHHHHHHHHHHH
Confidence 78999999877651 111100111101112233422 11222233322
Q ss_pred hh----hhhhcCCCCeEecCCCCCCcccCCCc--cE-EEEeCCCcccCCCCcchhhHhHHHHHHHHHc
Q 003594 576 LS----FLHSTEPRPIVHGSLTPSSILLDRNL--VA-KISGLGLNICDQLNVRSDIRAFGTLLLHLLT 636 (808)
Q Consensus 576 L~----yLH~~~~~~iiHrDLKp~NILld~~~--~~-kl~DfGla~~~~~t~ksDVwS~Gvil~ellt 636 (808)
+. ..-..-|.++||+|+.+.|||++.++ .+ -|+|||-+... .=||=+++.+..++.
T Consensus 190 ~~~~v~p~l~~Lp~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~~-----~~v~DLAialay~~~ 252 (1013)
T PRK06148 190 FERNVAPRLAALPAQVIHNDANDYNILVDADDGERISGLIDFGDAVHA-----PRICEVAIAAAYAIL 252 (1013)
T ss_pred HHHHHHHHHhcCCcceECCCCCcccEEEcCCCCcceEEEEECcccccc-----cHHHHHHHHHHHHhc
Confidence 21 11122357799999999999998775 44 49999987543 235667777754444
No 498
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=96.91 E-value=0.012 Score=65.00 Aligned_cols=75 Identities=16% Similarity=0.133 Sum_probs=51.7
Q ss_pred cccCCceEEEEEEECC--eEEEEEEcc------C---CCCHHHHHHHHHHHhccC--CC-CccceeeccccceEEEEeec
Q 003594 470 KCAGDWTNVYRGRLNH--ASVAIKTLN------N---GLSEEDFQAKVSFLTAVR--HP-HLVAVMGCCSELKCIVFEYM 535 (808)
Q Consensus 470 ~g~G~~g~Vy~~~~~~--~~vAiK~l~------~---~~~~~~~~~Ei~il~~l~--Hp-nIv~l~g~~~~~~~lV~Ey~ 535 (808)
+|+|....||++...+ +.|+||.-. . ....++...|...|.... -| .+.++|.+-.+...+|||++
T Consensus 3 igdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~D~e~~~~vMEdL 82 (370)
T TIGR01767 3 VGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHFDTEMAVTVMEDL 82 (370)
T ss_pred CCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEEccccceehHhhC
Confidence 4678889999999854 589999754 1 223456667888887663 24 56667777777888999999
Q ss_pred CCC-CHHHHH
Q 003594 536 PNG-NLRDKL 544 (808)
Q Consensus 536 ~~g-sL~~~l 544 (808)
+.. .|.+.|
T Consensus 83 ~~~~ilR~~L 92 (370)
T TIGR01767 83 SHHKIARKGL 92 (370)
T ss_pred ccchHHHHHH
Confidence 643 344444
No 499
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=96.90 E-value=0.0035 Score=67.32 Aligned_cols=69 Identities=14% Similarity=0.044 Sum_probs=42.7
Q ss_pred cccCCceEEEEEEE-CCeEEEEEEccCCCCHHHHHHHHHHHhccCC--CC-ccceeeccccceEEEEeecCCCCH
Q 003594 470 KCAGDWTNVYRGRL-NHASVAIKTLNNGLSEEDFQAKVSFLTAVRH--PH-LVAVMGCCSELKCIVFEYMPNGNL 540 (808)
Q Consensus 470 ~g~G~~g~Vy~~~~-~~~~vAiK~l~~~~~~~~~~~Ei~il~~l~H--pn-Iv~l~g~~~~~~~lV~Ey~~~gsL 540 (808)
+++|....||.... +|..+++|.-+.......+.+|+.+|..+.. |- +.+++..+ ..+++|++++|..+
T Consensus 19 ~~~g~~~~v~~i~~~~g~~~VlR~p~~~~~~~~l~rE~~vL~~L~~~l~vpvP~~~~~~--~~~~~y~~i~G~p~ 91 (276)
T cd05152 19 NESGLDFQVVFAKDTDGVPWVLRIPRRPDVSERAAAEKRVLALVRKHLPVQVPDWRVHT--PELIAYPKLPGVPA 91 (276)
T ss_pred cCCcceeEEEEEEcCCCCeEEEEecCCHHHHHHHHHHHHHHHHHHhcCCCCCCceeeec--CceEEEeccCCCcc
Confidence 34554556776654 5889999987644445678999999998852 21 12223222 33567777766543
No 500
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=96.89 E-value=0.0093 Score=60.37 Aligned_cols=131 Identities=16% Similarity=0.292 Sum_probs=90.4
Q ss_pred ccccccCHHHHHHhhccccccccccccCCc-eEEEEEEECCeEEEEEEcc------CCC-----------------CHHH
Q 003594 446 CAFREYAAEDIRLATEDFSERFRLKCAGDW-TNVYRGRLNHASVAIKTLN------NGL-----------------SEED 501 (808)
Q Consensus 446 ~~~~~~~~~ei~~at~~f~~~~~i~g~G~~-g~Vy~~~~~~~~vAiK~l~------~~~-----------------~~~~ 501 (808)
.....|+.. +.+|. -+..+|.|.- |.||++..+|..+|+|++. ... -..-
T Consensus 27 PKL~~F~~h-----~~~I~-flefLg~g~~~~~V~kv~I~g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~P 100 (207)
T PF13095_consen 27 PKLEPFTHH-----GDDIE-FLEFLGHGSHDGYVFKVEIDGRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADP 100 (207)
T ss_pred CCcCCcCCC-----CCcEe-eeeecCCCCceeEEEEEEECCeEEEEEEeeccccCCCccccccccccccccchhhhhcCh
Confidence 445566661 13333 3456788989 9999999999999999933 100 0124
Q ss_pred HHHHHHHHhccC---CCCc--cceeecc--c-c-----------------ceEEEEeecCCCCHHHHHhhcccccccccc
Q 003594 502 FQAKVSFLTAVR---HPHL--VAVMGCC--S-E-----------------LKCIVFEYMPNGNLRDKLFTSQRNYKNCSR 556 (808)
Q Consensus 502 ~~~Ei~il~~l~---HpnI--v~l~g~~--~-~-----------------~~~lV~Ey~~~gsL~~~l~~~~~~~~~~~~ 556 (808)
|..|.+...+|+ +.++ |+++||. . + ...||.||++...
T Consensus 101 F~~ECRAfgRLke~~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~----------------- 163 (207)
T PF13095_consen 101 FNCECRAFGRLKEAGREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP----------------- 163 (207)
T ss_pred HHHHHHhhHHHHhccccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc-----------------
Confidence 788988888774 4466 8999986 1 0 1357888876532
Q ss_pred CCCCCHHHHHHHHHHHHHHhhhhhhcCCCCeEecCCCCCCcccCCCccEEEEeCCCc
Q 003594 557 ARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLN 613 (808)
Q Consensus 557 ~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDLKp~NILld~~~~~kl~DfGla 613 (808)
.+. ..=+.+|.+-|..+|. .+|+-+|+++.|.. .-||+|||.+
T Consensus 164 --~~~----~~~~~~~~~dl~~~~k---~gI~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 164 --PLQ----IRDIPQMLRDLKILHK---LGIVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred --ccc----hhHHHHHHHHHHHHHH---CCeeeccCcccccc-----CCEEEecccC
Confidence 111 2235677788889999 56999999999985 3589999865
Done!