Query 003594
Match_columns 808
No_of_seqs 558 out of 3858
Neff 7.6
Searched_HMMs 29240
Date Tue Mar 26 18:21:46 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/003594.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1642-1646//hhsearch_pdb/003594hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gt4_A Tyrosine-protein kinase 1.0 1 1 381.7 19.7 241 451-704 18-304 (308)
2 3omv_A RAF proto-oncogene seri 1.0 1 1 378.9 18.9 220 468-707 42-301 (307)
3 4aoj_A High affinity nerve gro 1.0 1 1 377.9 20.6 236 461-707 41-320 (329)
4 4asz_A BDNF/NT-3 growth factor 1.0 1 1 376.3 20.3 231 467-707 18-290 (299)
5 4b9d_A Serine/threonine-protei 1.0 1 1 362.6 17.9 218 465-700 27-277 (350)
6 4ase_A Vascular endothelial gr 1.0 1 1 362.6 20.3 248 450-707 53-348 (353)
7 4fie_A Serine/threonine-protei 1.0 1 1 356.8 19.2 215 464-699 153-400 (423)
8 4fih_A Serine/threonine-protei 1.0 1 1 355.7 17.5 214 465-699 77-323 (346)
9 4g3f_A NF-kappa-beta-inducing 1.0 1 1 355.1 18.4 222 465-709 61-319 (336)
10 3fpq_A Serine/threonine-protei 1.0 1 1 354.2 17.2 220 463-699 27-282 (290)
No 1
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=1.00 E-value=1 Score=381.68 Aligned_cols=241 Identities=23% Similarity=0.372 Sum_probs=197.4
Q ss_pred CCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEE-------CCEEEEEEECCCC---CCHHHHHHHHHHHHCCCCCCCCCE
Q ss_conf 488889986206110012224689449999998-------9917999991688---998899999999850589884504
Q 003594 451 YAAEDIRLATEDFSERFRLKCAGDWTNVYRGRL-------NHASVAIKTLNNG---LSEEDFQAKVSFLTAVRHPHLVAV 520 (808)
Q Consensus 451 ~~~~ei~~at~~f~~~~~i~g~G~~g~Vy~g~~-------~~~~VAiK~l~~~---~~~~~f~~Ev~il~~l~HpnIv~l 520 (808)
+.+.|+..++-.|.+ .+|.|+||.||+|.+ ++..||||+++.. ...+.|.+|+.++++++|||||++
T Consensus 18 ~~~~ei~~~~~~~~~---~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l 94 (308)
T 4gt4_A 18 AKLKEISLSAVRFME---ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCL 94 (308)
T ss_dssp -CCCBCCGGGEEEEE---EEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCE
T ss_pred CCCCCCCHHHCEEEE---EECCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 772228788885866---91358884899999857765888869999998801496899999999999985899898773
Q ss_pred EECCCC--CEEEEEEECCCCCHHHHHHHCCCCCCC------CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCC
Q ss_conf 400146--407999515999988899321254433------435777899999999999897866443059998484377
Q 003594 521 MGCCSE--LKCIVFEYMPNGNLRDKLFTSQRNYKN------CSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSL 592 (808)
Q Consensus 521 ~g~~~~--~~~lV~Ey~~~gsL~~~l~~~~~~~~~------~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDl 592 (808)
+|+|.+ ..+||||||++|+|.++|......... ......++|..++.|+.|||.||.|||+ ++||||||
T Consensus 95 ~g~~~~~~~~~lV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDL 171 (308)
T 4gt4_A 95 LGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS---HHVVHKDL 171 (308)
T ss_dssp EEEECSSSSCEEEEECCSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCC
T ss_pred CEEEEECCEEEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCC
T ss_conf 649988998899998189994999998627654333322111124689999999999999999999986---89977873
Q ss_pred CCCCCCCCCCCCEEEEECCCCCC---------------------------CCCCCCHHHHHHHHHHHHHHC-CCCCCHHH
Q ss_conf 88995658886199971798534---------------------------899962046839999999981-99993136
Q 003594 593 TPSSILLDRNLVAKISGLGLNIC---------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLV 644 (808)
Q Consensus 593 Kp~NILld~~~~~Ki~DfGla~~---------------------------~~~t~ksDVySlGvil~ellt-G~~P~~~~ 644 (808)
||+||||+.++.+||+|||+|+. ..++.++|||||||+||||+| |++||...
T Consensus 172 K~~NILl~~~~~~Ki~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvvl~El~t~g~~Pf~~~ 251 (308)
T 4gt4_A 172 ATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGY 251 (308)
T ss_dssp SGGGEEECGGGCEEECCSCCBCGGGGGGCBCSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTC
T ss_pred CCCCEEECCCCCEEECCCCCCEECCCCCCEEEECCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 62306887999789887602023367774047345125776569899827999963000157999999996899999998
Q ss_pred HHHHHHCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 887520378799872067999993369999999999531398757544178669999999
Q 003594 645 EKAMALDQTTLMQVLDGNAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEV 704 (808)
Q Consensus 645 ~~~~~~~~~~~~~ild~~~~~~p~~~~~~l~~Li~~Cl~~~~~p~~Rps~~evl~~L~~l 704 (808)
.....+..+......+.|..++..+.+|+.+||+.+ |..||+|.+|+..|+.+
T Consensus 252 -----~~~~~~~~i~~~~~~~~p~~~~~~~~~li~~C~~~d--P~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 252 -----SNQDVVEMIRNRQVLPCPDDCPAWVYALMIECWNEF--PSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp -----CHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSS--GGGSCCHHHHHHHHHTS
T ss_pred -----CHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCC--HHHCCCHHHHHHHHHHC
T ss_conf -----999999999819989996203699999999975879--65792999999999853
No 2
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=1.00 E-value=1 Score=378.89 Aligned_cols=220 Identities=19% Similarity=0.396 Sum_probs=185.7
Q ss_pred CCCCCCCCEEEEEEEECCEEEEEEECCC-CCC---HHHHHHHHHHHHCCCCCCCCCEEECCCC-CEEEEEEECCCCCHHH
Q ss_conf 2224689449999998991799999168-899---8899999999850589884504400146-4079995159999888
Q 003594 468 RLKCAGDWTNVYRGRLNHASVAIKTLNN-GLS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE-LKCIVFEYMPNGNLRD 542 (808)
Q Consensus 468 ~i~g~G~~g~Vy~g~~~~~~VAiK~l~~-~~~---~~~f~~Ev~il~~l~HpnIv~l~g~~~~-~~~lV~Ey~~~gsL~~ 542 (808)
+.+|.|+||.||+|.+.+ .||||+++. ... .+.|.+|+.++++++|||||+++|+|.+ ..+||||||+||+|.+
T Consensus 42 ~~iG~G~fG~Vy~~~~~~-~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~iVmEy~~gGsL~~ 120 (307)
T 3omv_A 42 TRIGSGSFGTVYKGKWHG-DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYK 120 (307)
T ss_dssp EECCCCSSSEEEEEESSS-EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSCEEEEECCSSCBHHH
T ss_pred EEEEECCCCEEEEEEECC-CEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCEEEEEEECCCCCCHHH
T ss_conf 498208886899999899-6899999726899999999999999998589988746999997895899997489987889
Q ss_pred HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCEEEEECCCCCC-------
Q ss_conf 9932125443343577789999999999989786644305999848437788995658886199971798534-------
Q 003594 543 KLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC------- 615 (808)
Q Consensus 543 ~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDlKp~NILld~~~~~Ki~DfGla~~------- 615 (808)
+|+. ....++|..++.|+.|||.||.|||+ ++||||||||+||||+.++.+||+|||+|+.
T Consensus 121 ~l~~---------~~~~l~~~~~~~i~~qia~gL~yLH~---~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~ 188 (307)
T 3omv_A 121 HLHV---------QETKFQMFQLIDIARQTAQGMDYLHA---KNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS 188 (307)
T ss_dssp HHHT---------SCCCCCHHHHHHHHHHHHHHHHHHHH---TTCBCSCCCSSSEEEETTEEEEECCCSSCBC-------
T ss_pred HHHH---------CCCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHEEECCCCCEEEEECCCCEECCCCCCC
T ss_conf 8752---------48999999999999999999999977---99527855789978889990899441575424667764
Q ss_pred -----------------------CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHH-----CCCCCCCC
Q ss_conf -----------------------89996204683999999998199993136887520378799872-----06799999
Q 003594 616 -----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVL-----DGNAGIWP 667 (808)
Q Consensus 616 -----------------------~~~t~ksDVySlGvil~elltG~~P~~~~~~~~~~~~~~~~~il-----d~~~~~~p 667 (808)
..++.++|||||||+||||+||++||.... ....+..++ .+.....+
T Consensus 189 ~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~-----~~~~~~~~~~~~~~~p~~~~~~ 263 (307)
T 3omv_A 189 QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHIN-----NRDQIIFMVGRGYASPDLSKLY 263 (307)
T ss_dssp -----CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCC-----CHHHHHHHHHTTCCCCCSTTSC
T ss_pred EEECCCCCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHHCCCCCCCCCCCC
T ss_conf 03156446877249878614689987868775728999999997889989999-----6999999996588888720035
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 3369999999999531398757544178669999999972
Q 003594 668 LDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVRKK 707 (808)
Q Consensus 668 ~~~~~~l~~Li~~Cl~~~~~p~~Rps~~evl~~L~~l~~~ 707 (808)
..+++.+.+|+.+||+.+ |..||+|.+|+..|+.++..
T Consensus 264 ~~~~~~l~~li~~cl~~d--P~~RPs~~ei~~~Le~l~~~ 301 (307)
T 3omv_A 264 KNCPKAMKRLVADCVKKV--KEERPLFPQILSSIELLQHS 301 (307)
T ss_dssp TTSCHHHHHHHHHHTCSS--STTSCCHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHHCCCC--HHHCCCHHHHHHHHHHHHCC
T ss_conf 445699999999975779--76890989999999997450
No 3
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=1.00 E-value=1 Score=377.85 Aligned_cols=236 Identities=24% Similarity=0.381 Sum_probs=196.3
Q ss_pred CCCCCCCCCCCCCCCEEEEEEEEC-------CEEEEEEECCCCC--CHHHHHHHHHHHHCCCCCCCCCEEECCCC--CEE
Q ss_conf 061100122246894499999989-------9179999916889--98899999999850589884504400146--407
Q 003594 461 EDFSERFRLKCAGDWTNVYRGRLN-------HASVAIKTLNNGL--SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKC 529 (808)
Q Consensus 461 ~~f~~~~~i~g~G~~g~Vy~g~~~-------~~~VAiK~l~~~~--~~~~f~~Ev~il~~l~HpnIv~l~g~~~~--~~~ 529 (808)
.+|.-. +.+|+|+||.||+|.+. +..||||+++... ..+.|.+|+.+|++++|||||+++|+|.+ ..+
T Consensus 41 ~d~~l~-~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~ 119 (329)
T 4aoj_A 41 RDIVLK-WELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLL 119 (329)
T ss_dssp GGEEEE-EEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEE
T ss_pred HHEEEE-EEECCCCCCEEEEEEECCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEE
T ss_conf 992887-7971477848998998786657789699999977579799999999999998589989996989999899899
Q ss_pred EEEEECCCCCHHHHHHHCCCCCC-----CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCC
Q ss_conf 99951599998889932125443-----3435777899999999999897866443059998484377889956588861
Q 003594 530 IVFEYMPNGNLRDKLFTSQRNYK-----NCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLV 604 (808)
Q Consensus 530 lV~Ey~~~gsL~~~l~~~~~~~~-----~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDlKp~NILld~~~~ 604 (808)
||||||++|+|.++|+....... ......+++|..++.|+.|||.||.|||+ ++||||||||+||||+.++.
T Consensus 120 lV~Ey~~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDLKp~NILl~~~~~ 196 (329)
T 4aoj_A 120 MVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAG---LHFVHRDLATRNCLVGQGLV 196 (329)
T ss_dssp EEEECCTTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCCGGGEEEETTTE
T ss_pred EEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHC---CCEECCCCCHHHEEECCCCC
T ss_conf 999827999399999860754100122112457889999999999999999999840---88422666676489889996
Q ss_pred EEEEECCCCCC---------------------------CCCCCCHHHHHHHHHHHHHHC-CCCCCHHHHHHHHHCHHHHH
Q ss_conf 99971798534---------------------------899962046839999999981-99993136887520378799
Q 003594 605 AKISGLGLNIC---------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLM 656 (808)
Q Consensus 605 ~Ki~DfGla~~---------------------------~~~t~ksDVySlGvil~ellt-G~~P~~~~~~~~~~~~~~~~ 656 (808)
+||+|||+|+. ..++.++|||||||+||||+| |++||.... ....+.
T Consensus 197 ~Ki~DFGla~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~-----~~~~~~ 271 (329)
T 4aoj_A 197 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLS-----NTEAID 271 (329)
T ss_dssp EEECCCC----------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHTTSCCTTCSSC-----HHHHHH
T ss_pred EEECCCCCCEECCCCCCCEECCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCC-----HHHHHH
T ss_conf 897666033365678753004764556566582654479999663001057899999828999999989-----999999
Q ss_pred HHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 872067999993369999999999531398757544178669999999972
Q 003594 657 QVLDGNAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVRKK 707 (808)
Q Consensus 657 ~ild~~~~~~p~~~~~~l~~Li~~Cl~~~~~p~~Rps~~evl~~L~~l~~~ 707 (808)
.+......+.|..+++++.+|+.+||+.| |..||+|.+|+..|+.+...
T Consensus 272 ~i~~g~~~~~p~~~~~~~~~li~~cl~~d--P~~RPs~~ei~~~L~~l~~~ 320 (329)
T 4aoj_A 272 CITQGRELERPRACPPEVYAIMRGCWQRE--PQQRHSIKDVHARLQALAQA 320 (329)
T ss_dssp HHHHTCCCCCCTTCCHHHHHHHHHHCCSS--TTTSCCHHHHHHHHHHHHHS
T ss_pred HHHCCCCCCCCCCCCHHHHHHHHHHCCCC--HHHCCCHHHHHHHHHHHHHC
T ss_conf 99808989986446399999999974759--65792999999999987458
No 4
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=1.00 E-value=1 Score=376.35 Aligned_cols=231 Identities=25% Similarity=0.413 Sum_probs=195.5
Q ss_pred CCCCCCCCCEEEEEEEEC-------CEEEEEEECCCCC--CHHHHHHHHHHHHCCCCCCCCCEEECCCC--CEEEEEEEC
Q ss_conf 122246894499999989-------9179999916889--98899999999850589884504400146--407999515
Q 003594 467 FRLKCAGDWTNVYRGRLN-------HASVAIKTLNNGL--SEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYM 535 (808)
Q Consensus 467 ~~i~g~G~~g~Vy~g~~~-------~~~VAiK~l~~~~--~~~~f~~Ev~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~ 535 (808)
.+.+|.|+||.||+|.+. +..||||+++... ..+.|.+|+.+|++++|||||+++|+|.+ ..+||||||
T Consensus 18 ~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 97 (299)
T 4asz_A 18 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYM 97 (299)
T ss_dssp EEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred EEEEEECCCCEEEEEEECCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEEECC
T ss_conf 24982078829999998776667788799999967778589999999999998589988862879995699899999858
Q ss_pred CCCCHHHHHHHCCCC---CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCEEEEECCC
Q ss_conf 999988899321254---43343577789999999999989786644305999848437788995658886199971798
Q 003594 536 PNGNLRDKLFTSQRN---YKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGL 612 (808)
Q Consensus 536 ~~gsL~~~l~~~~~~---~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDlKp~NILld~~~~~Ki~DfGl 612 (808)
++|+|.++|+..... .........|+|..++.|+.||+.||.|||+ ++||||||||+||||+.++.+||+|||+
T Consensus 98 ~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~---~~iiHRDlKp~NILl~~~~~~Ki~DFGl 174 (299)
T 4asz_A 98 KHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVKIGDFGM 174 (299)
T ss_dssp TTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHH---TTCCCSCCSGGGEEECGGGCEEECCCSC
T ss_pred CCCCHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHEEECCCCCEEECCCCC
T ss_conf 9996899998608642111235777889999999999999999999975---9904676577638987998689887300
Q ss_pred CCC---------------------------CCCCCCHHHHHHHHHHHHHHC-CCCCCHHHHHHHHHCHHHHHHHHCCCCC
Q ss_conf 534---------------------------899962046839999999981-9999313688752037879987206799
Q 003594 613 NIC---------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWAGLVEKAMALDQTTLMQVLDGNAG 664 (808)
Q Consensus 613 a~~---------------------------~~~t~ksDVySlGvil~ellt-G~~P~~~~~~~~~~~~~~~~~ild~~~~ 664 (808)
|+. ..++.++|||||||+||||+| |++||... .....+..+......
T Consensus 175 a~~~~~~~~~~~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~-----~~~~~~~~i~~~~~~ 249 (299)
T 4asz_A 175 SRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQL-----SNNEVIECITQGRVL 249 (299)
T ss_dssp HHHHTGGGCEEETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTTTTS-----CHHHHHHHHHHTCCC
T ss_pred CEECCCCCCEEECCCEECCHHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC-----CHHHHHHHHHCCCCC
T ss_conf 100678874166475134701038898707999703667788999999980899999998-----999999999808988
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 9993369999999999531398757544178669999999972
Q 003594 665 IWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVRKK 707 (808)
Q Consensus 665 ~~p~~~~~~l~~Li~~Cl~~~~~p~~Rps~~evl~~L~~l~~~ 707 (808)
..|..+++++.+|+.+||+.| |..||++.+|+..|+.+.+.
T Consensus 250 ~~p~~~~~~~~~li~~cl~~d--P~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 250 QRPRTCPQEVYELMLGCWQRE--PHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp CCCTTCCHHHHHHHHHHTCSS--GGGSCCHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHCCCC--HHHCCCHHHHHHHHHHHHHC
T ss_conf 997414399999999976879--66892999999999877763
No 5
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=1.00 E-value=1 Score=362.62 Aligned_cols=218 Identities=18% Similarity=0.321 Sum_probs=188.2
Q ss_pred CCCCCCCCCCCEEEEEEEE--CCEEEEEEECCCC-CC---HHHHHHHHHHHHCCCCCCCCCEEECCCC--CEEEEEEECC
Q ss_conf 0012224689449999998--9917999991688-99---8899999999850589884504400146--4079995159
Q 003594 465 ERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNG-LS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMP 536 (808)
Q Consensus 465 ~~~~i~g~G~~g~Vy~g~~--~~~~VAiK~l~~~-~~---~~~f~~Ev~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~ 536 (808)
+..+.+|+|+||.||+|.. +|+.||||++... .. .+.|.+|+.+|++++|||||++++++.+ ..|||||||+
T Consensus 27 ~~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~~ 106 (350)
T 4b9d_A 27 VRLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCE 106 (350)
T ss_dssp EEEEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred EEEEEEECCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEEECCC
T ss_conf 88479702779399999988999899999986587897999999999999987799898919999998999999994889
Q ss_pred CCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCEEEEECCCCCC-
Q ss_conf 9998889932125443343577789999999999989786644305999848437788995658886199971798534-
Q 003594 537 NGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC- 615 (808)
Q Consensus 537 ~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDlKp~NILld~~~~~Ki~DfGla~~- 615 (808)
||+|.++|... ....+++..++.|+.||+.||.|||+ ++||||||||+||||+.++.+||+|||+|+.
T Consensus 107 gg~L~~~i~~~--------~~~~~~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~ 175 (350)
T 4b9d_A 107 GGDLFKRINAQ--------KGVLFQEDQILDWFVQICLALKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVL 175 (350)
T ss_dssp TCBHHHHHHHT--------TTCCCCHHHHHHHHHHHHHHHHHHHH---TTCEETTCCGGGEEECTTCCEEECSTTEESCC
T ss_pred CCCHHHHHHHC--------CCCCCCHHHHHHHHHHHHHHHHHHHH---CCEEECCCCHHHEEECCCCCEEECCCCCCEEE
T ss_conf 98399999973--------89999789999999999999999998---99151359789979878999897646521440
Q ss_pred ------------------------CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHCCCCCCCCHHHH
Q ss_conf ------------------------89996204683999999998199993136887520378799872067999993369
Q 003594 616 ------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNAGIWPLDLA 671 (808)
Q Consensus 616 ------------------------~~~t~ksDVySlGvil~elltG~~P~~~~~~~~~~~~~~~~~ild~~~~~~p~~~~ 671 (808)
..|+.++|||||||+||||+||++||... .....+..++....+..+..++
T Consensus 176 ~~~~~~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~-----~~~~~~~~i~~~~~~~~~~~~s 250 (350)
T 4b9d_A 176 NSTVELARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAG-----SMKNLVLKIISGSFPPVSLHYS 250 (350)
T ss_dssp CHHHHHHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCS-----SHHHHHHHHHHTCCCCCCTTSC
T ss_pred CCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCC-----CHHHHHHHHHCCCCCCCCCCCC
T ss_conf 68854101457883603999987999895999999999999999787998996-----9999999998089999975579
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCHHHHHHH
Q ss_conf 99999999953139875754417866999
Q 003594 672 EELAGIALKCLSADQDANRDLRIAGVMKE 700 (808)
Q Consensus 672 ~~l~~Li~~Cl~~~~~p~~Rps~~evl~~ 700 (808)
.++.+|+.+||+.| |..||++.++++.
T Consensus 251 ~~~~~li~~~L~~d--P~~R~s~~e~l~h 277 (350)
T 4b9d_A 251 YDLRSLVSQLFKRN--PRDRPSVNSILEK 277 (350)
T ss_dssp HHHHHHHHHHTCSS--GGGSCCHHHHHTS
T ss_pred HHHHHHHHHHCCCC--HHHCCCHHHHHCC
T ss_conf 99999999985589--6679089999639
No 6
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=1.00 E-value=1 Score=362.58 Aligned_cols=248 Identities=21% Similarity=0.336 Sum_probs=201.2
Q ss_pred CCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECC-------EEEEEEECCCCCC---HHHHHHHHHHHHCCCC-CCCC
Q ss_conf 448888998620611001222468944999999899-------1799999168899---8899999999850589-8845
Q 003594 450 EYAAEDIRLATEDFSERFRLKCAGDWTNVYRGRLNH-------ASVAIKTLNNGLS---EEDFQAKVSFLTAVRH-PHLV 518 (808)
Q Consensus 450 ~~~~~ei~~at~~f~~~~~i~g~G~~g~Vy~g~~~~-------~~VAiK~l~~~~~---~~~f~~Ev~il~~l~H-pnIv 518 (808)
.|...+++...++|.-. +.+|.|+||.||+|.+.+ ..||||++..... .+.|.+|+.+|.+++| ||||
T Consensus 53 p~~~~~wEi~~~~~~l~-~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV 131 (353)
T 4ase_A 53 PYDASKWEFPRDRLKLG-KPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131 (353)
T ss_dssp CCCHHHHBCCGGGEEEE-EEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBC
T ss_pred CCCCCCCEECHHHEEEE-EEEECCCCEEEEEEEECCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEE
T ss_conf 98885517057995982-09821789599999986888544775999999762358689999999999999757998487
Q ss_pred CEEECCCC---CEEEEEEECCCCCHHHHHHHCCCCCCC------CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEE
Q ss_conf 04400146---407999515999988899321254433------435777899999999999897866443059998484
Q 003594 519 AVMGCCSE---LKCIVFEYMPNGNLRDKLFTSQRNYKN------CSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVH 589 (808)
Q Consensus 519 ~l~g~~~~---~~~lV~Ey~~~gsL~~~l~~~~~~~~~------~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiH 589 (808)
+++|+|.+ ..+||||||++|+|.++|+........ ......++|..++.|+.|||.||.|||+ ++|||
T Consensus 132 ~l~g~~~~~~~~~~iV~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~---~~iiH 208 (353)
T 4ase_A 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLAS---RKCIH 208 (353)
T ss_dssp CEEEEECCTTSCCEEEEECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHH---TTCCC
T ss_pred EEEEEEEECCCEEEEEEECCCCCCHHHHHHHCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHH---CCEEC
T ss_conf 788999946977999998389897999997435666543334101103568999999999999999876762---78435
Q ss_pred CCCCCCCCCCCCCCCEEEEECCCCCC---------------------------CCCCCCHHHHHHHHHHHHHHC-CCCCC
Q ss_conf 37788995658886199971798534---------------------------899962046839999999981-99993
Q 003594 590 GSLTPSSILLDRNLVAKISGLGLNIC---------------------------DQLNVRSDIRAFGTLLLHLLT-GRNWA 641 (808)
Q Consensus 590 rDlKp~NILld~~~~~Ki~DfGla~~---------------------------~~~t~ksDVySlGvil~ellt-G~~P~ 641 (808)
|||||+|||++.++.+||+|||+|+. ..++.++|||||||+||||+| |++||
T Consensus 209 RDLK~~NILl~~~~~vKi~DFGlar~~~~~~~~~~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~Gv~l~El~t~G~~Pf 288 (353)
T 4ase_A 209 RDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPY 288 (353)
T ss_dssp SCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSS
T ss_pred CCCCCCCEEECCCCCEEECCCHHHHHCCCCCCCEEECCCCCCCCCCCHHHHHCCCCCCCCCEEEHHHHHHHHHHCCCCCC
T ss_conf 74672113057999789796543222456887203254014666569899946999975537406899999981899999
Q ss_pred HHHHHHHHHCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 136887520378799872067999993369999999999531398757544178669999999972
Q 003594 642 GLVEKAMALDQTTLMQVLDGNAGIWPLDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVRKK 707 (808)
Q Consensus 642 ~~~~~~~~~~~~~~~~ild~~~~~~p~~~~~~l~~Li~~Cl~~~~~p~~Rps~~evl~~L~~l~~~ 707 (808)
.... ........+.++.....|..+++++.+|+.+||+.| |..||++.++++.|+.+...
T Consensus 289 ~~~~----~~~~~~~~i~~g~~~~~p~~~~~~~~~li~~c~~~d--P~~RPt~~eil~~L~~llq~ 348 (353)
T 4ase_A 289 PGVK----IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGE--PSQRPTFSELVEHLGNLLQA 348 (353)
T ss_dssp TTCC----CSHHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSS--GGGSCCHHHHHHHHHHHHHH
T ss_pred CCCC----HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCC--HHHCCCHHHHHHHHHHHHHH
T ss_conf 9989----899999999738988888657899999999976869--66793999999999999987
No 7
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=1.00 E-value=1 Score=356.78 Aligned_cols=215 Identities=18% Similarity=0.203 Sum_probs=181.0
Q ss_pred CCCCCCCCCCCCEEEEEEEE--CCEEEEEEECC--CCCCHHHHHHHHHHHHCCCCCCCCCEEECCCC--CEEEEEEECCC
Q ss_conf 10012224689449999998--99179999916--88998899999999850589884504400146--40799951599
Q 003594 464 SERFRLKCAGDWTNVYRGRL--NHASVAIKTLN--NGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPN 537 (808)
Q Consensus 464 ~~~~~i~g~G~~g~Vy~g~~--~~~~VAiK~l~--~~~~~~~f~~Ev~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~ 537 (808)
++..+.+|.|+||.||+|.+ +|..||||++. .....+.+.+|+.+|+.++|||||++++++.+ ..|||||||+|
T Consensus 153 y~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~g 232 (423)
T 4fie_A 153 LDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEG 232 (423)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTT
T ss_pred CEEEEEECCCCCCEEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEEECCCC
T ss_conf 38616962481848999999999989999998625546899999999999857998987168999989999999969899
Q ss_pred CCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCEEEEECCCCCC--
Q ss_conf 998889932125443343577789999999999989786644305999848437788995658886199971798534--
Q 003594 538 GNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC-- 615 (808)
Q Consensus 538 gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDlKp~NILld~~~~~Ki~DfGla~~-- 615 (808)
|+|.+++. ...+++..+..|+.||+.||.|||+ ++||||||||+||||+.++.+||+|||+|+.
T Consensus 233 G~L~~~i~-----------~~~l~e~~~~~~~~qil~aL~ylH~---~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~ 298 (423)
T 4fie_A 233 GALTDIVT-----------HTRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVS 298 (423)
T ss_dssp EEHHHHHH-----------HSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSTTTEEECTTCCEEECCCTTCEECC
T ss_pred CCHHHHHH-----------CCCCCHHHHHHHHHHHHHHHHHHHH---CCEECCCCCHHHEEECCCCCEEEECCCCCEECC
T ss_conf 82898876-----------1698999999999999999999998---890446578777898589998980372654777
Q ss_pred -----------------------CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHCCC--CCCCCHHH
Q ss_conf -----------------------89996204683999999998199993136887520378799872067--99999336
Q 003594 616 -----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGN--AGIWPLDL 670 (808)
Q Consensus 616 -----------------------~~~t~ksDVySlGvil~elltG~~P~~~~~~~~~~~~~~~~~ild~~--~~~~p~~~ 670 (808)
..|+.++|||||||++|||++|++||.... ....+..+.+.. ....+..+
T Consensus 299 ~~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~-----~~~~~~~i~~~~~~~~~~~~~~ 373 (423)
T 4fie_A 299 KEVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP-----PLKAMKMIRDNLPPRLKNLHKV 373 (423)
T ss_dssp SSCCCBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHHHHHSCCCCCSCTTSS
T ss_pred CCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHCCCCCCCCCCCCC
T ss_conf 88764346664747279999779999968999999999999997879989869-----9999999972799887650129
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCHHHHHH
Q ss_conf 99999999995313987575441786699
Q 003594 671 AEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 671 ~~~l~~Li~~Cl~~~~~p~~Rps~~evl~ 699 (808)
++++.+|+.+||..| |..||++.++++
T Consensus 374 s~~~~dli~~~L~~d--P~~R~ta~ell~ 400 (423)
T 4fie_A 374 SPSLKGFLDRLLVRD--PAQRATAAELLK 400 (423)
T ss_dssp CHHHHHHHHHHSCSS--TTTSCCHHHHTT
T ss_pred CHHHHHHHHHHCCCC--HHHCCCHHHHHC
T ss_conf 999999999986789--568909999960
No 8
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=1.00 E-value=1 Score=355.66 Aligned_cols=214 Identities=18% Similarity=0.208 Sum_probs=180.5
Q ss_pred CCCCCCCCCCCEEEEEEEE--CCEEEEEEECC--CCCCHHHHHHHHHHHHCCCCCCCCCEEECCCC--CEEEEEEECCCC
Q ss_conf 0012224689449999998--99179999916--88998899999999850589884504400146--407999515999
Q 003594 465 ERFRLKCAGDWTNVYRGRL--NHASVAIKTLN--NGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNG 538 (808)
Q Consensus 465 ~~~~i~g~G~~g~Vy~g~~--~~~~VAiK~l~--~~~~~~~f~~Ev~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~g 538 (808)
+..+.+|.|+||.||+|.+ +|..||||++. .....+.+.+|+.+|+.++|||||++++++.+ ..|||||||+||
T Consensus 77 ~~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg 156 (346)
T 4fih_A 77 DNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGG 156 (346)
T ss_dssp EEEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTE
T ss_pred EEEEEEECCCCEEEEEEEECCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEEECCCCC
T ss_conf 87079602728299999998999899999985276568999999999998679989991999999899999999698998
Q ss_pred CHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCEEEEECCCCCC---
Q ss_conf 98889932125443343577789999999999989786644305999848437788995658886199971798534---
Q 003594 539 NLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNLVAKISGLGLNIC--- 615 (808)
Q Consensus 539 sL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDlKp~NILld~~~~~Ki~DfGla~~--- 615 (808)
+|.+++. ...+++..+..|+.||+.||.|||+ ++||||||||+||||+.++.+||+|||+|+.
T Consensus 157 ~L~~~l~-----------~~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~ 222 (346)
T 4fih_A 157 ALTDIVT-----------HTRMNEEQIAAVCLAVLQALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSK 222 (346)
T ss_dssp EHHHHHH-----------HSCCCHHHHHHHHHHHHHHHHHHHH---TTEECCCCSGGGEEECTTCCEEECCCTTCEECCS
T ss_pred CHHHHHH-----------CCCCCHHHHHHHHHHHHHHHHHHHH---CCCCCCCCCHHHEEECCCCCEEEECCCCCEECCC
T ss_conf 0899987-----------1898999999999999999999998---8835562788997887999889902757536678
Q ss_pred ----------------------CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHCCC--CCCCCHHHH
Q ss_conf ----------------------89996204683999999998199993136887520378799872067--999993369
Q 003594 616 ----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGN--AGIWPLDLA 671 (808)
Q Consensus 616 ----------------------~~~t~ksDVySlGvil~elltG~~P~~~~~~~~~~~~~~~~~ild~~--~~~~p~~~~ 671 (808)
..|+.++|||||||++|||++|++||.... ....+..+.+.. ....+..++
T Consensus 223 ~~~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~-----~~~~~~~i~~~~~~~~~~~~~~s 297 (346)
T 4fih_A 223 EVPRRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEP-----PLKAMKMIRDNLPPRLKNLHKVS 297 (346)
T ss_dssp SSCCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSC-----HHHHHHHHHHSSCCCCSCGGGSC
T ss_pred CCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 8775346562758279999779999968999999999999997879989859-----99999999717999887502299
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCHHHHHH
Q ss_conf 9999999995313987575441786699
Q 003594 672 EELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 672 ~~l~~Li~~Cl~~~~~p~~Rps~~evl~ 699 (808)
+++.+|+.+||+.| |..||++.++++
T Consensus 298 ~~~~dli~~~L~~d--P~~R~ta~e~l~ 323 (346)
T 4fih_A 298 PSLKGFLDRLLVRD--PAQRATAAELLK 323 (346)
T ss_dssp HHHHHHHHHHSCSS--TTTSCCHHHHTT
T ss_pred HHHHHHHHHHCCCC--HHHCCCHHHHHC
T ss_conf 99999999986799--568909999960
No 9
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=1.00 E-value=1 Score=355.07 Aligned_cols=222 Identities=17% Similarity=0.211 Sum_probs=185.3
Q ss_pred CCCCCCCCCCCEEEEEEEE--CCEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCEEECCCC--CEEEEEEECCCCCH
Q ss_conf 0012224689449999998--9917999991688998899999999850589884504400146--40799951599998
Q 003594 465 ERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNGLSEEDFQAKVSFLTAVRHPHLVAVMGCCSE--LKCIVFEYMPNGNL 540 (808)
Q Consensus 465 ~~~~i~g~G~~g~Vy~g~~--~~~~VAiK~l~~~~~~~~f~~Ev~il~~l~HpnIv~l~g~~~~--~~~lV~Ey~~~gsL 540 (808)
...+.+|+|+||.||+|.+ +|..||||+++... .+.+|+.+++.++|||||++++++.+ ..|||||||+||+|
T Consensus 61 ~~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~---~~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L 137 (336)
T 4g3f_A 61 THQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEV---FRVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL 137 (336)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTT---CCTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCBH
T ss_pred EECCEECCCCCEEEEEEEECCCCCEEEEEEECHHH---HHHHHHHHHHHCCCCCCCCEEEEEEECCEEEEEEECCCCCCH
T ss_conf 76868513878099999988999899999978888---699999999857998999399999989999999966599869
Q ss_pred HHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCC-CEEEEECCCCCC----
Q ss_conf 889932125443343577789999999999989786644305999848437788995658886-199971798534----
Q 003594 541 RDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDRNL-VAKISGLGLNIC---- 615 (808)
Q Consensus 541 ~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDlKp~NILld~~~-~~Ki~DfGla~~---- 615 (808)
.++|. ....+++..+..|+.||+.||.|||+ ++||||||||+||||+.++ .+||+|||+|+.
T Consensus 138 ~~~l~----------~~~~l~e~~~~~~~~qi~~aL~ylH~---~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~ 204 (336)
T 4g3f_A 138 GQLIK----------QMGCLPEDRALYYLGQALEGLEYLHT---RRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPD 204 (336)
T ss_dssp HHHHH----------HHSSCCHHHHHHHHHHHHHHHHHHHT---TTEECSCCCGGGEEECTTSCCEEECCCTTCEEC---
T ss_pred HHHHH----------HCCCCCHHHHHHHHHHHHHHHHHHHH---CCCEECCCCHHHEEEECCCCEEEEEECCCCEECCCC
T ss_conf 99998----------76999999999999999999999998---890426167788799589997999627877685678
Q ss_pred --------------------------CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHCCC--CCCCC
Q ss_conf --------------------------89996204683999999998199993136887520378799872067--99999
Q 003594 616 --------------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGN--AGIWP 667 (808)
Q Consensus 616 --------------------------~~~t~ksDVySlGvil~elltG~~P~~~~~~~~~~~~~~~~~ild~~--~~~~p 667 (808)
..|+.++|||||||++|||+||++||.... ....+..+.... ...+|
T Consensus 205 ~~~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~-----~~~~~~~i~~~~~~~~~~~ 279 (336)
T 4g3f_A 205 GLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYF-----RGPLCLKIASEPPPIREIP 279 (336)
T ss_dssp ---------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTC-----CSCCHHHHHHSCCGGGGSC
T ss_pred CCCCCEECCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHHCCCCCCHHCC
T ss_conf 76540221785455802008999889998908999999999999997869989989-----9999999980899800258
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 336999999999953139875754417866999999997202
Q 003594 668 LDLAEELAGIALKCLSADQDANRDLRIAGVMKELDEVRKKAD 709 (808)
Q Consensus 668 ~~~~~~l~~Li~~Cl~~~~~p~~Rps~~evl~~L~~l~~~~~ 709 (808)
..+++.+.+|+.+||+.| |..||++.|+++.|........
T Consensus 280 ~~~s~~~~~li~~~L~~d--P~~R~sa~el~~~l~~~l~~~~ 319 (336)
T 4g3f_A 280 PSCAPLTAQAIQEGLRKE--PVHRASAMELRRKVGKALQEVG 319 (336)
T ss_dssp TTSCHHHHHHHHHHTCSS--GGGSCCHHHHHHHHHHHHHHTT
T ss_pred CCCCHHHHHHHHHHCCCC--HHHCCCHHHHHHHHHHHHHHHH
T ss_conf 667999999999976289--7689599999999999975443
No 10
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=1.00 E-value=1 Score=354.18 Aligned_cols=220 Identities=22% Similarity=0.334 Sum_probs=179.1
Q ss_pred CCCCCCCCCCCCCEEEEEEEE--CCEEEEEEECCCC-CC---HHHHHHHHHHHHCCCCCCCCCEEECCCC------CEEE
Q ss_conf 110012224689449999998--9917999991688-99---8899999999850589884504400146------4079
Q 003594 463 FSERFRLKCAGDWTNVYRGRL--NHASVAIKTLNNG-LS---EEDFQAKVSFLTAVRHPHLVAVMGCCSE------LKCI 530 (808)
Q Consensus 463 f~~~~~i~g~G~~g~Vy~g~~--~~~~VAiK~l~~~-~~---~~~f~~Ev~il~~l~HpnIv~l~g~~~~------~~~l 530 (808)
|....+.+|+|+||.||+|.+ ++..||+|++... .. .+.|.+|+.++++++|||||+++++|.+ ..||
T Consensus 27 ~~~~~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~l 106 (290)
T 3fpq_A 27 FLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVL 106 (290)
T ss_dssp EEEEEEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEE
T ss_pred EEEEEEEEECCCCCEEEEEEECCCCEEEEEEEECHHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCEEEE
T ss_conf 68950697007385999999889990999999832547989999999999999867998999198899643678868999
Q ss_pred EEEECCCCCHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCC-CCCEEEEE
Q ss_conf 99515999988899321254433435777899999999999897866443059998484377889956588-86199971
Q 003594 531 VFEYMPNGNLRDKLFTSQRNYKNCSRARALRWLDRIHIAHEVCLGLSFLHSTEPRPIVHGSLTPSSILLDR-NLVAKISG 609 (808)
Q Consensus 531 V~Ey~~~gsL~~~l~~~~~~~~~~~~~~~l~~~~~~~i~~qia~aL~yLH~~~~~~iiHrDlKp~NILld~-~~~~Ki~D 609 (808)
|||||+||+|.+++. ....+++..+..|+.||+.||.|||+.+ .+||||||||+||||+. ++.+||+|
T Consensus 107 vmEy~~gg~L~~~l~----------~~~~l~~~~~~~~~~qi~~aL~ylH~~~-~~IiHRDlKp~NILl~~~~g~vKl~D 175 (290)
T 3fpq_A 107 VTELMTSGTLKTYLK----------RFKVMKIKVLRSWCRQILKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGD 175 (290)
T ss_dssp EEECCCSCBHHHHHH----------HHSSCCHHHHHHHHHHHHHHHHHHHTSS-SCCCCCCCCGGGEEESSTTSCEEECC
T ss_pred EEECCCCCCHHHHHH----------HCCCCCHHHHHHHHHHHHHHHHHHHHCC-CCEEECCCCHHHEEEECCCCCEEEEE
T ss_conf 994879789999998----------6699999999999999999999999779-98871645742665888999889972
Q ss_pred CCCCCC----------------------CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCHHHHHHHHCCCC-CCC
Q ss_conf 798534----------------------899962046839999999981999931368875203787998720679-999
Q 003594 610 LGLNIC----------------------DQLNVRSDIRAFGTLLLHLLTGRNWAGLVEKAMALDQTTLMQVLDGNA-GIW 666 (808)
Q Consensus 610 fGla~~----------------------~~~t~ksDVySlGvil~elltG~~P~~~~~~~~~~~~~~~~~ild~~~-~~~ 666 (808)
||+|+. +.++.++|||||||+||||+||++||..... .......+..... ..+
T Consensus 176 FGla~~~~~~~~~~~~GTp~YmAPE~~~~~y~~~~DiwSlGvilyelltg~~Pf~~~~~----~~~~~~~i~~~~~~~~~ 251 (290)
T 3fpq_A 176 LGLATLKRASFAKAVIGTPEFMAPEMYEEKYDESVDVYAFGMCMLEMATSEYPYSECQN----AAQIYRRVTSGVKPASF 251 (290)
T ss_dssp TTGGGGCCTTSBEESCSSCCCCCGGGGGTCCCTHHHHHHHHHHHHHHHHSSCTTTTCSS----HHHHHHHHTTTCCCGGG
T ss_pred CCCCEECCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC----HHHHHHHHHCCCCCCCC
T ss_conf 76887679876677624802018978079999278888799999999978899999981----99999999738998777
Q ss_pred CHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
Q ss_conf 933699999999995313987575441786699
Q 003594 667 PLDLAEELAGIALKCLSADQDANRDLRIAGVMK 699 (808)
Q Consensus 667 p~~~~~~l~~Li~~Cl~~~~~p~~Rps~~evl~ 699 (808)
+...++++.+|+.+||..| |..|||+.+++.
T Consensus 252 ~~~~~~~~~~li~~~L~~d--P~~R~s~~e~l~ 282 (290)
T 3fpq_A 252 DKVAIPEVKEIIEGCIRQN--KDERYSIKDLLN 282 (290)
T ss_dssp GGCCCHHHHHHHHHHSCSS--GGGSCCHHHHHT
T ss_pred CCCCCHHHHHHHHHHCCCC--HHHCCCHHHHHC
T ss_conf 7657899999999976389--657919999956
Done!