Query 003597
Match_columns 808
No_of_seqs 243 out of 688
Neff 4.8
Searched_HMMs 29240
Date Tue Mar 26 17:48:05 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/003597.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1647-1651//hhsearch_pdb/003597hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ox0_A JMJC domain-containing 1.0 1 1 687.0 19.1 322 28-431 32-354 (381)
2 3opt_A DNA damage-responsive t 1.0 1 1 672.2 12.5 337 29-418 11-367 (373)
3 3dxt_A JMJC domain-containing 1.0 1 1 663.5 18.0 322 28-431 14-336 (354)
4 3avr_A Lysine-specific demethy 1.0 1 1 465.3 17.5 289 238-556 224-525 (531)
5 4ask_A Lysine-specific demethy 1.0 1 1 421.0 20.5 284 245-556 206-500 (510)
6 2xxz_A Lysine-specific demethy 1.0 1 1 357.3 10.8 161 238-407 165-330 (332)
7 2ypd_A Probable JMJC domain-co 1.0 1 1 70.2 9.1 104 303-406 234-344 (392)
8 3kv4_A PHD finger protein 8; e 1.0 1 1 66.7 16.4 147 272-434 234-383 (447)
9 3k3o_A PHF8, PHD finger protei 1.0 1 1 66.3 15.2 147 271-433 149-298 (371)
10 3kv5_D JMJC domain-containing 1.0 1 1 65.8 15.4 147 271-433 268-417 (488)
No 1
>2ox0_A JMJC domain-containing histone demethylation PROT; double-stranded beta helix, demethylase, oxygenase, SGC, STR genomics, structural genomics consortium, oxidoreductase; HET: MLY ALY OGA; 1.95A {Homo sapiens} PDB: 2oq7_A* 2os2_A* 2ot7_A* 2oq6_A* 2vd7_A* 2ybk_A* 2ybp_A* 2ybs_A* 3njy_A* 3pdq_A* 3u4s_A* 2p5b_A* 2q8c_A* 2q8d_A* 2q8e_A* 2gp5_A* 2gp3_A* 2wwj_A* 2pxj_A* 2xml_A*
Probab=1.00 E-value=1 Score=687.00 Aligned_cols=322 Identities=34% Similarity=0.613 Sum_probs=275.9
Q ss_pred CCCCCCCCCCCHHHHHCHHHHHHHHHHH-HHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCHHH
Q ss_conf 9999974578977532899999999985-341691246399999999978533434566433652001011235520111
Q 003597 28 IIDEAPVFYPTVEEFEDTLGYIAKIRSK-AESFGICRIVPPSSWTPPCPLKAKNIWENAKFSTRIQQIDLLQNREPMRKK 106 (808)
Q Consensus 28 ~i~e~PVF~PT~EEF~Dpl~YI~kI~~~-aekyGIcKIVPP~~W~Pp~~l~~k~i~~~~kF~triQ~i~~Lq~r~p~~k~ 106 (808)
.-.+|||||||+|||+||++||++|+++ |++|||||||||++|+||+.++. .++++|++++|++...+.+.
T Consensus 32 ~~~~iPVF~PT~EEF~Df~~YI~kIe~~gA~~~GI~KIIPP~~W~p~~~~~~---~~~~~i~~piqQ~~~g~~g~----- 103 (381)
T 2ox0_A 32 PSARIMTFYPTMEEFRNFSRYIAYIESQGAHRAGLAKVVPPKEWKPRASYDD---IDDLVIPAPIQQLVTGQSGL----- 103 (381)
T ss_dssp TTCCCEEECCCHHHHSCHHHHHHHHHHTTGGGGSEEEECCCTTCCSCSCSTT---CTTCEESSCEEEEEEEETTE-----
T ss_pred CCCCCCEECCCHHHHHCHHHHHHHHHHCCCCCCCCEEECCCCCCCCCCCCCH---HHHCCCCCCCEEEECCCCCC-----
T ss_conf 9998746827999975999999999755666568610337756787555221---64242577613551588765-----
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 12334321012334555678998764442333545553248988998899999988986607999977765676655567
Q 003597 107 IRSRKRKRRRQSRMGSTRRNANSSSEANAAETDEKFGFQSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRL 186 (808)
Q Consensus 107 ~~~~k~k~~~~~~~~~~~r~~~~~s~~~~~~~~e~fgF~~g~~~TL~eF~k~Ad~fk~~~f~~~~~~~~~~s~~~~~~~~ 186 (808)
+. .++++ ++.||+.+|+++|+.++. ..+ .
T Consensus 104 ----------~~----------------------~~~~~-~k~~tl~~f~~~a~~~~~---~~p---------------~ 132 (381)
T 2ox0_A 104 ----------FT----------------------QYNIQ-KKAMTVREFRKIANSDKY---CTP---------------R 132 (381)
T ss_dssp ----------EE----------------------EEEEE-CCCEEHHHHHHHHHSTTT---SCC---------------C
T ss_pred ----------CC----------------------CCCCC-CCCCCHHHHHHHHCCCCC---CCC---------------C
T ss_conf ----------33----------------------34564-433589999998521344---787---------------6
Q ss_pred CCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 98877799995431069998200000678888876789889899999983123301676658989999996545699888
Q 003597 187 EPSVVDIEGEYWRIIERPTDEVEVYYGADLETGAFASGFPKASSLGTESDLDQYAMSGWNLNNLPRLPGSVLAFEGSDIS 266 (808)
Q Consensus 187 ~ps~e~iE~eyWr~V~~~~~~VeV~YGaDi~ss~~GSgFP~~~~~~~~~~~~~y~~~~WNLnnLp~l~gSLL~~~~~~I~ 266 (808)
.++.+++|++|||+|+. ++|+||+|++++.|+++ .++|||+|||.+.++||++.+.+|+
T Consensus 133 ~~~~~~lE~~fWr~v~~----~~~~YgaD~~gS~f~~~-----------------~~~WNL~~Lp~ll~~ll~~~~~~I~ 191 (381)
T 2ox0_A 133 YSEFEELERKYWKNLTF----NPPIYGADVNGTLYEKH-----------------VDEWNIGRLRTILDLVEKESGITIE 191 (381)
T ss_dssp CSSHHHHHHHHHHHTTS----SCCEEEEEEECCCSCTT-----------------CCSSCTTCCCCGGGHHHHHHCCCCB
T ss_pred CCCHHHHHHHHHHHCCC----CCCEEECCCCCCCCCCC-----------------CCCCCHHHHHHHHHHHHHHCCCCCC
T ss_conf 67788999999864776----88612147776557789-----------------9978153256677788875388787
Q ss_pred CCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCEEEEEECCCCHHHHHHHHHHHCCHHHHCCCHHHHHCCCCCCHHH
Q ss_conf 86312598414666434300686412124544088510897075208999999995253113039101100002569032
Q 003597 267 GVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSV 346 (808)
Q Consensus 267 GVttP~LYiGM~fStf~WH~ED~~LySINYlH~GapK~WY~VP~~~aekFE~llk~~~p~~f~~~pd~L~hl~~~isP~~ 346 (808)
|||+||||+||+||+||||+||++||||||+|+|+||+||+||++++++||++|++.+|+++..|++||+|+++|++|+.
T Consensus 192 GVn~P~LYiGm~~S~f~WH~ED~~L~SINYlH~GapK~WY~VP~~~~~kfE~l~~~~~P~~~~~~~~~L~h~~~~isP~~ 271 (381)
T 2ox0_A 192 GVNTPYLYFGMWKTSFAWHTEDMDLYSINYLHFGEPKSWYSVPPEHGKRLERLAKGFFPGSAQSCEAFLRHKMTLISPLM 271 (381)
T ss_dssp TTTSCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHHHHHSHHHHHHCTTGGGGSCEEECHHH
T ss_pred CCCCCEEEEECCCCCCCCEECCCCCEEEEEEECCCCEEEEECCHHHHHHHHHHHHHHCHHHHHCCHHHHHCCCCCCCHHH
T ss_conf 86554387414566767331488652567863488638996388999999999998673544205577635540459999
Q ss_pred HHHCCCCEEEEECCCCCEEEECCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
Q ss_conf 75179980675117993999748841035305532034322455315645899999998415989985889999999999
Q 003597 347 LKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQAA 426 (808)
Q Consensus 347 L~~~GIpv~r~vQ~pGEFVVTfP~aYHsgfn~GfN~aEAVNFA~~dWL~~g~~a~e~yr~~~r~~~fS~d~LL~~~A~~~ 426 (808)
|+++||||++++|+|||||||||+|||+|||+||||+||||||+++|+++|..|.++.+. .....++||.++-+.- ..
T Consensus 272 L~~~GIpv~r~vQ~pGEfViTfP~aYH~gfn~GfN~aEAvNFA~~~Wl~~g~~a~~c~c~-~~~v~i~~d~~~~~~~-~~ 349 (381)
T 2ox0_A 272 LKKYGIPFDKVTQEAGEFMITFPYGYHAGFNHGFNCAESTNFATRRWIEYGKQAVLCSCR-KDMVKISMDVFVRKFQ-PE 349 (381)
T ss_dssp HHHTTCCCEEEEECTTCEEEECTTCEEEEEECSSEEEEEEEECCTTHHHHHHHCCCCCSS-TTCCCCCCHHHHHHHC-GG
T ss_pred HHHCCCCEEEEEECCCCEEEECCCCEEEEECCCCCHHHHHCCCCHHHHHHHHHHHHCCCC-CCCEEECHHHHHHHHC-HH
T ss_conf 987799648987569988998887378764276238777524737788876766525565-7731314999998738-38
Q ss_pred HHHHH
Q ss_conf 99999
Q 003597 427 IKALW 431 (808)
Q Consensus 427 ~~~l~ 431 (808)
.+.+|
T Consensus 350 ~~~~w 354 (381)
T 2ox0_A 350 RYKLW 354 (381)
T ss_dssp GHHHH
T ss_pred HHHHH
T ss_conf 88898
No 2
>3opt_A DNA damage-responsive transcriptional repressor R; RPH1, histone demethylase, catalytic core, oxidoreductase; HET: DNA AKG; 2.20A {Saccharomyces cerevisiae} PDB: 3opw_A*
Probab=1.00 E-value=1 Score=672.20 Aligned_cols=337 Identities=31% Similarity=0.599 Sum_probs=269.8
Q ss_pred CCCCCCCCCCHHHHHCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCC-CCCCCCCCCCCCCCCC-------HHCCCCC
Q ss_conf 9999745789775328999999999853416912463999999999785-3343456643365200-------1011235
Q 003597 29 IDEAPVFYPTVEEFEDTLGYIAKIRSKAESFGICRIVPPSSWTPPCPLK-AKNIWENAKFSTRIQQ-------IDLLQNR 100 (808)
Q Consensus 29 i~e~PVF~PT~EEF~Dpl~YI~kI~~~aekyGIcKIVPP~~W~Pp~~l~-~k~i~~~~kF~triQ~-------i~~Lq~r 100 (808)
..+|||||||+|||+||.+||++|+++|+++||||||||++|+|++... ..+.+++++++++||| +..+||.
T Consensus 11 ~~~~pVF~PT~eeF~dF~~yi~~i~~~g~~~Gi~KVIPPkeW~~~~~~~~~~~~l~~~~i~~PI~Q~~~G~~G~~~~~ni 90 (373)
T 3opt_A 11 VGGVPVFKPTYEQFEDFYAYCKAINKYGMKSGVVKVIPPKEWKDKLDLPYSAETLQKIKIKSPIQQHISGNKGLFMVQNV 90 (373)
T ss_dssp ESSSEEECCCHHHHTCHHHHHHTTHHHHTTSSEEEECCCHHHHTTSCSSCCHHHHHHCEEESCEEEEEEESSSEEEEEEE
T ss_pred CCCCCEECCCHHHHHCHHHHHHHHHHHCCCCCEEEEECCHHHHHCCCCCCCHHHHHCCCCCCCCEEEECCCCCEEEEEEE
T ss_conf 59987357799998699999999987341168578857544422145787676895073799817985389725888640
Q ss_pred CCCHHHHHHH------------HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC
Q ss_conf 5201111233------------4321012334555678998764442333545553248988998899999988986607
Q 003597 101 EPMRKKIRSR------------KRKRRRQSRMGSTRRNANSSSEANAAETDEKFGFQSGPDLTLEGFQKYAQNFKECYFG 168 (808)
Q Consensus 101 ~p~~k~~~~~------------k~k~~~~~~~~~~~r~~~~~s~~~~~~~~e~fgF~~g~~~TL~eF~k~Ad~fk~~~f~ 168 (808)
++.++..... +++.|+..+.+...+.. ..... ..+..+++++|++++..+...
T Consensus 91 e~~r~~~~~q~k~l~~~~~~p~~~~~~~~~~~~~~~~~~------~~~~~------~~~~~~~~~~~~~~~~~~~~~--- 155 (373)
T 3opt_A 91 EKNKTYNIIQWKDLSKDYVPPEDPKARRNSRKGSVSKST------KLKLK------NFESSFNIDDFEQFRTEYTID--- 155 (373)
T ss_dssp ECSCEEEHHHHHHHTTSSCCCCC------------------------------------CCCCHHHHHHHTTTSSCC---
T ss_pred CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC------CCCCC------CCCCCCCHHHHHHHHHHHCCC---
T ss_conf 025666789998765511787544432224566666433------33223------344432267889988760644---
Q ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCC
Q ss_conf 99997776567665556798877799995431069998200000678888876789889899999983123301676658
Q 003597 169 MNDSKEDVKSDGFEHKRLEPSVVDIEGEYWRIIERPTDEVEVYYGADLETGAFASGFPKASSLGTESDLDQYAMSGWNLN 248 (808)
Q Consensus 169 ~~~~~~~~~s~~~~~~~~~ps~e~iE~eyWr~V~~~~~~VeV~YGaDi~ss~~GSgFP~~~~~~~~~~~~~y~~~~WNLn 248 (808)
. + .+ .-+++.++||++||++|.. .+|+||||+ .||+||.. .++|||+
T Consensus 156 --~------~---~~-~~~~~~~~lE~~yW~~~~~----~~p~YgaD~----~GS~F~~~-------------~~~WNL~ 202 (373)
T 3opt_A 156 --L------S---DF-QNTERLKFLEEYYWKTLNF----TTPMYGADT----PGSIFPEG-------------LNVWNVA 202 (373)
T ss_dssp --C------T---TS-SCHHHHHHHHHHHHHTTTT----SCCEEEEEE----ECCCSCTT-------------CCSSCTT
T ss_pred --H------H---HC-CCCCHHHHHHHHHHHHCCC----CCCEEECCC----CCCCCCCC-------------CCCCCHH
T ss_conf --5------5---51-6720599999999875567----886675489----88776899-------------8865854
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCEEEEEECCCCHHHHHHHHHHHCCHHH
Q ss_conf 98999999654569988886312598414666434300686412124544088510897075208999999995253113
Q 003597 249 NLPRLPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDLF 328 (808)
Q Consensus 249 nLp~l~gSLL~~~~~~I~GVttP~LYiGM~fStf~WH~ED~~LySINYlH~GapK~WY~VP~~~aekFE~llk~~~p~~f 328 (808)
||| +||++++.+|+|||+||||+||+||+||||+||++||||||+|+|+||+||+||++++++||++|++.+|+++
T Consensus 203 ~Lp----~lL~~l~~~I~GVntP~LYvGm~~Stf~WH~ED~~L~SINYlH~GapK~WY~VP~~~~~kfE~l~k~~~p~~~ 278 (373)
T 3opt_A 203 KLP----NILDHMETKVPGVNDSYLYAGLWKASFSWHLEDQDLYSINYIHFGAPKQWYSIPQEDRFKFYKFMQEQFPEEA 278 (373)
T ss_dssp SCC------------------CCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEECCGGGHHHHHHHHHHSSHHHH
T ss_pred HHH----HHHHHHCCCCCCCCHHHEEECCCCCCCCEEECCCCCEEEEEEECCCCEEEEEECHHHHHHHHHHHHHHCHHHH
T ss_conf 514----5888742667985531066526567865131488453677763288708999488999999999998671544
Q ss_pred HCCCHHHHHCCCCCCHHHHHHCCCCEEEEECCCCCEEEECCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 03910110000256903275179980675117993999748841035305532034322455315645899999998415
Q 003597 329 EEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQH 408 (808)
Q Consensus 329 ~~~pd~L~hl~~~isP~~L~~~GIpv~r~vQ~pGEFVVTfP~aYHsgfn~GfN~aEAVNFA~~dWL~~g~~a~e~yr~~~ 408 (808)
..|++||+|+++|++|+.|+++||||++++|+|||||||||+|||+|||+||||+||||||+++||++|+.|..+.+. .
T Consensus 279 ~~c~~fL~h~~~lisP~~L~~~GIpv~r~vQ~pGEfViTfP~aYH~gfn~Gfn~aEAvNFA~~~Wl~~g~~a~~C~C~-~ 357 (373)
T 3opt_A 279 KNCPEFLRHKMFLASPKLLQENGIRCNEIVHHEGEFMITYPYGYHAGFNYGYNLAESVNFALEEWLPIGKKAGKCHCI-S 357 (373)
T ss_dssp SSCSSCTTTSCEEECHHHHHTTTCCCEEEEECTTCEEEECTTCCEEEEESSSEEEEEEEECCC-----------------
T ss_pred HHCHHHHHCCCCCCCHHHHHHCCCCEEEEEECCCCEEEECCCCEEEEEECCCCHHHHHCCCCHHHHHHHCCCCCCCCC-C
T ss_conf 307788617755589999986699628988779978998788358898667229888744837778762517657355-8
Q ss_pred CCCCCCHHHH
Q ss_conf 9899858899
Q 003597 409 RKTSLSHDKL 418 (808)
Q Consensus 409 r~~~fS~d~L 418 (808)
...-|++++|
T Consensus 358 d~v~i~~~~~ 367 (373)
T 3opt_A 358 DSVEIDVKKL 367 (373)
T ss_dssp ----------
T ss_pred CCCEECHHHH
T ss_conf 8520069999
No 3
>3dxt_A JMJC domain-containing histone demethylation PROT; JMJD2D, histone demethylase, H3K9, jumonji domain-CONT protein 2D, oxidoreductase; 1.80A {Homo sapiens} PDB: 3dxu_A* 4hon_A* 4hoo_A 2w2i_A*
Probab=1.00 E-value=1 Score=663.54 Aligned_cols=322 Identities=34% Similarity=0.599 Sum_probs=274.9
Q ss_pred CCCCCCCCCCCHHHHHCHHHHHHHHHHHH-HHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCHHH
Q ss_conf 99999745789775328999999999853-41691246399999999978533434566433652001011235520111
Q 003597 28 IIDEAPVFYPTVEEFEDTLGYIAKIRSKA-ESFGICRIVPPSSWTPPCPLKAKNIWENAKFSTRIQQIDLLQNREPMRKK 106 (808)
Q Consensus 28 ~i~e~PVF~PT~EEF~Dpl~YI~kI~~~a-ekyGIcKIVPP~~W~Pp~~l~~k~i~~~~kF~triQ~i~~Lq~r~p~~k~ 106 (808)
...++||||||+|||+||.+||++|+++| +++||||||||++|+|+...+ ++ +++.+++++|++...+.+.
T Consensus 14 ~~~~ipvF~PT~eEF~df~~Yi~~ie~~Ga~~~Gi~KIIPP~~W~~r~~~~--~~-~~~~i~~pi~q~~~g~~G~----- 85 (354)
T 3dxt_A 14 PNCNIMIFHPTKEEFNDFDKYIAYMESQGAHRAGLAKIIPPKEWKARETYD--NI-SEILIATPLQQVASGRAGV----- 85 (354)
T ss_dssp TTCCCEEECCCTTGGGCHHHHHHHHHHTTGGGGSEEEECCCTTCCSSSCST--TC-TTCEESSCEEEEEEEETTE-----
T ss_pred CCCCCCEECCCHHHHHCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCC--CH-HCCCCCCCCEEEECCCCCE-----
T ss_conf 999864366899997699999999985655425850124741036764413--05-2252368715553489845-----
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
Q ss_conf 12334321012334555678998764442333545553248988998899999988986607999977765676655567
Q 003597 107 IRSRKRKRRRQSRMGSTRRNANSSSEANAAETDEKFGFQSGPDLTLEGFQKYAQNFKECYFGMNDSKEDVKSDGFEHKRL 186 (808)
Q Consensus 107 ~~~~k~k~~~~~~~~~~~r~~~~~s~~~~~~~~e~fgF~~g~~~TL~eF~k~Ad~fk~~~f~~~~~~~~~~s~~~~~~~~ 186 (808)
+.. +. ...+.||+++|+++|+.. .|.++..
T Consensus 86 ----------~~~----------------------~~-~~~k~~t~~~f~~~a~~~---~~~~p~~-------------- 115 (354)
T 3dxt_A 86 ----------FTQ----------------------YH-KKKKAMTVGEYRHLANSK---KYQTPPH-------------- 115 (354)
T ss_dssp ----------EEE----------------------EE-EECCCEEHHHHHHHHTST---TTSCCCC--------------
T ss_pred ----------EEE----------------------EE-ECCCCCCHHHHHHHHHHH---HCCCCCC--------------
T ss_conf ----------777----------------------22-036755799999997663---3069988--------------
Q ss_pred CCCHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 98877799995431069998200000678888876789889899999983123301676658989999996545699888
Q 003597 187 EPSVVDIEGEYWRIIERPTDEVEVYYGADLETGAFASGFPKASSLGTESDLDQYAMSGWNLNNLPRLPGSVLAFEGSDIS 266 (808)
Q Consensus 187 ~ps~e~iE~eyWr~V~~~~~~VeV~YGaDi~ss~~GSgFP~~~~~~~~~~~~~y~~~~WNLnnLp~l~gSLL~~~~~~I~ 266 (808)
.+.+++|++||+++... .|+||||++ ||+||.. .++|||+|||.+.++||++.+.+|+
T Consensus 116 -~~~~~lE~~fW~~~~~~----~p~YgaD~~----gS~F~~~-------------~~~WNL~~L~~~~~~Ll~~~~~~I~ 173 (354)
T 3dxt_A 116 -QNFEDLERKYWKNRIYN----SPIYGADIS----GSLFDEN-------------TKQWNLGHLGTIQDLLEKECGVVIE 173 (354)
T ss_dssp -SSHHHHHHHHHHHGGGC----CCEEEEEEE----CCCSCTT-------------CCSSCTTSSCCHHHHHHHHHCCCCC
T ss_pred -CCHHHHHHHHHHHCCCC----CCEEEECCC----CCCCCCC-------------CCHHHHHHCCCHHHHHHHHCCCCCC
T ss_conf -99899999986633468----860231478----7636888-------------5511054433236778751477778
Q ss_pred CCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCEEEEEECCCCHHHHHHHHHHHCCHHHHCCCHHHHHCCCCCCHHH
Q ss_conf 86312598414666434300686412124544088510897075208999999995253113039101100002569032
Q 003597 267 GVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSV 346 (808)
Q Consensus 267 GVttP~LYiGM~fStf~WH~ED~~LySINYlH~GapK~WY~VP~~~aekFE~llk~~~p~~f~~~pd~L~hl~~~isP~~ 346 (808)
|||+||||+||+||+||||+||++||||||+|+|+||+||+||++++++||++|++.+|+.++.|++||+|++++++|+.
T Consensus 174 GVntP~LYiGm~~Stf~WH~ED~~L~SINYlH~GapK~WY~VP~~~~~kfE~l~k~~~p~~~~~c~~fL~h~~~lisP~~ 253 (354)
T 3dxt_A 174 GVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHLGEPKTWYVVPPEHGQRLERLARELFPGSSRGCGAFLRHKVALISPTV 253 (354)
T ss_dssp CCCCCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHHHHHHSHHHHHHCTTGGGGCCEEECHHH
T ss_pred CCCCEEEEECCCCCCCCCEECCCCCEEEEEEECCCCEEEEEECHHHHHHHHHHHHHHCCHHHHHCHHHHHCCCCCCCHHH
T ss_conf 75611065315367875140488555788875288608999388999999999998672122105788736754479999
Q ss_pred HHHCCCCEEEEECCCCCEEEECCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
Q ss_conf 75179980675117993999748841035305532034322455315645899999998415989985889999999999
Q 003597 347 LKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSLSHDKLLFGSVQAA 426 (808)
Q Consensus 347 L~~~GIpv~r~vQ~pGEFVVTfP~aYHsgfn~GfN~aEAVNFA~~dWL~~g~~a~e~yr~~~r~~~fS~d~LL~~~A~~~ 426 (808)
|+++||||++++|+|||||||||++||+|||+||||+||||||+++||++|+.|.++.+.. ....|+||.++... +..
T Consensus 254 L~~~GIpv~~~vQ~pGEfViTfP~aYH~gfn~Gfn~aEAvNFA~~~Wl~~g~~A~~C~C~~-~~v~i~~d~~~~~~-~~~ 331 (354)
T 3dxt_A 254 LKENGIPFNRITQEAGEFMVTFPYGYHAGFNHGFNCAEAINFATPRWIDYGKMASQCSCGE-ARVTFSMDAFVRIL-QPE 331 (354)
T ss_dssp HHHTTCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEECCGGGHHHHHHCCCCCSSS-CCCCHHHHHHHHHH-CHH
T ss_pred HHHCCCCEEEEEECCCCEEEECCCCEEEEEECCCCHHHHHCCCCHHHHHHHHHCCCCCCCC-CCCEECHHHHHHHH-CHH
T ss_conf 9877996189886799589988873677763651476754558677887623040363557-66336399998863-878
Q ss_pred HHHHH
Q ss_conf 99999
Q 003597 427 IKALW 431 (808)
Q Consensus 427 ~~~l~ 431 (808)
...+|
T Consensus 332 ~~~~w 336 (354)
T 3dxt_A 332 RYDLW 336 (354)
T ss_dssp HHHHH
T ss_pred HHHHH
T ss_conf 78887
No 4
>3avr_A Lysine-specific demethylase 6A; cupin superfamily, TRI/dimethyllysine demethylase, oxidoredu structural protein complex; HET: M3L OGA EDO; 1.80A {Homo sapiens} PDB: 3avs_A*
Probab=1.00 E-value=1 Score=465.26 Aligned_cols=289 Identities=19% Similarity=0.170 Sum_probs=223.9
Q ss_pred HHHHCCCCCCCCCCC-----CCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCEEEEEECCCC
Q ss_conf 233016766589899-----999965456998888631259841466643430068641212454408851089707520
Q 003597 238 DQYAMSGWNLNNLPR-----LPGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSH 312 (808)
Q Consensus 238 ~~y~~~~WNLnnLp~-----l~gSLL~~~~~~I~GVttP~LYiGM~fStf~WH~ED~~LySINYlH~GapK~WY~VP~~~ 312 (808)
..+....|||++||. ..||||+|++..|+|||+||||+||+||+||||+||++++||||||+|++|+||+||+++
T Consensus 224 ~~w~~ql~el~kLP~~lr~~~~gslL~~~~~~I~Gvn~pqLYig~~gS~t~~H~E~~~l~SiNynhggg~~~Wy~VP~e~ 303 (531)
T 3avr_A 224 KKWKLQLHELTKLPAFVRVVSAGNLLSHVGHTILGMNTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFVVPEGY 303 (531)
T ss_dssp TTTHHHHHHGGGSCGGGCSSCTTCGGGGSCSCCBTTSSCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGG
T ss_pred HHHHHHHHHHHHCCHHHCCCCCCCHHHHCCCCCCCCCHHHEEEECCCCCCCCEECCCCCEEEEEECCCCCEEEEEECHHH
T ss_conf 65699999987588977036864456636887888674335750575556645447845146753078874899967899
Q ss_pred HHHHHHHHHHHCCHHHHCCCHHHHHCCCCCCHHHHHHCCCCEEEEECCCCCEEEECCCCCEEEEECCCCEEEEECCCCCC
Q ss_conf 89999999952531130391011000025690327517998067511799399974884103530553203432245531
Q 003597 313 ASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVD 392 (808)
Q Consensus 313 aekFE~llk~~~p~~f~~~pd~L~hl~~~isP~~L~~~GIpv~r~vQ~pGEFVVTfP~aYHsgfn~GfN~aEAVNFA~~d 392 (808)
+++||+++++... +++.. .+|++|+.|.++||||||++|+|||||||||||||||||+|||++||||||+++
T Consensus 304 ~~k~e~l~~k~~~-------~~~~~-~~~~~p~~L~~~gIPvyr~vQkpGd~Vi~~PgayH~v~n~G~~~n~awN~a~~~ 375 (531)
T 3avr_A 304 WGVLNDFCEKNNL-------NFLMG-SWWPNLEDLYEANVPVYRFIQRPGDLVWINAGTVHWVQAIGWCNNIAWNVGPLT 375 (531)
T ss_dssp HHHHHHHHHHTTC-------CTTTS-CBCCCHHHHHHTTCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEECCSS
T ss_pred HHHHHHHHHHCCC-------CHHHC-EEECCHHHHHHCCCCEEEEEECCCCEEEECCCCEEEEEECCEEEEEEEEECCCC
T ss_conf 9999999997398-------72114-430688999867997599997789889989984378874534546578705686
Q ss_pred HHHHHHHHHHHHH---HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHH
Q ss_conf 5645899999998---4159899858899999999999999988542025888720010014522569999999997784
Q 003597 393 WLAHGQQAVELYS---EQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACGKDGVLTKAIKTRVQMKKE 469 (808)
Q Consensus 393 WL~~g~~a~e~yr---~~~r~~~fS~d~LL~~~A~~~~~~l~~l~l~~k~~~~~~~~~~~~~~d~il~~~~k~r~~~e~~ 469 (808)
|++++. |+++|+ ..+..++|||++|+|++|+.... .++....+.+.| |...++.. ..
T Consensus 376 ~~q~~~-A~e~y~~Nk~~~~~sivp~~~L~wn~a~~~~~----------~d~~l~~~ik~~-----L~rsl~~~----~~ 435 (531)
T 3avr_A 376 ACQYKL-AVERYEWNKLQSVKSIVPMVHLSWNMARNIKV----------SDPKLFEMIKYC-----LLRTLKQC----QT 435 (531)
T ss_dssp HHHHHH-HHHHHHHHHHHTCCCSSCHHHHHHHHHHHCCC----------CCHHHHHHHHHH-----HHHHHHHH----HH
T ss_pred HHHHHH-HHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHC----------CCHHHHHHHHHH-----HHHHHHHH----HH
T ss_conf 677999-99999986440578878889999998865502----------669999999999-----99999999----99
Q ss_pred HCCCCC-HHHHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCCCC----CCCCCCCCCCHHHHCCCCCCCEEEEEECCHHHH
Q ss_conf 103573-034331000135886653355443200100002454----579310013323215999996089996399999
Q 003597 470 GLQKLP-SYFKLQKMEIDFDLKTERECFSCFYDLHLSAAGCKC----SPDRFACLKHANIFCSCEIDHRFVILRYSTDEL 544 (808)
Q Consensus 470 ~~~~l~-~~~~~~k~~~~~d~~der~C~~Ck~~cfLS~V~C~C----~~~~~~CL~Ha~~lCsC~~~~~~LlyRYt~~EL 544 (808)
.++.+. .+..+ ........++.+.|..|+++||++.+.|.. ....++|++|+...|.| ..+.++++||+++||
T Consensus 436 ~~~~l~~~g~~i-~~~~~~~~~~~~~C~~C~~~lFn~~~v~~~~~~~~~~~v~C~~Ca~~~~~~-l~~~~v~~ry~~eeL 513 (531)
T 3avr_A 436 LREALIAAGKEI-IWHGRTKEEPAHYCSICEVEVFDLLFVTNESNSRKTYIVHCQDCARKTSGN-LENFVVLEQYKMEDL 513 (531)
T ss_dssp HHHHHHHTTCCE-EECCCCTTCCCEECTTTCCEECSEEEEEECTTCSSEEEEECHHHHHHHCTT-CTTCEEEECSCHHHH
T ss_pred HHHHHHHCCCEE-EECCCCCCCCCEECCCCCHHHEEEEEEEECCCCCCCCCCCCHHHHHHCCCC-CCCEEEEEECCHHHH
T ss_conf 999998679778-764656788881622261121211778725777787883986446304835-045489997589999
Q ss_pred HHHHHHHHHCHH
Q ss_conf 999999981102
Q 003597 545 NTLVEALEGGLD 556 (808)
Q Consensus 545 ~~lv~~l~~r~~ 556 (808)
..++++|.....
T Consensus 514 ~~~yd~f~~~~~ 525 (531)
T 3avr_A 514 MQVYDQFTLAPP 525 (531)
T ss_dssp HHHHHTCCCCCC
T ss_pred HHHHHHEEECCC
T ss_conf 999975473578
No 5
>4ask_A Lysine-specific demethylase 6B; oxidoreductase, KDM6B, GSK-J1, inhibitor, lysine specific HI demethylase; HET: K0I; 1.86A {Homo sapiens} PDB: 2xue_A* 4eyu_A* 4ez4_A* 4ezh_A*
Probab=1.00 E-value=1 Score=420.96 Aligned_cols=284 Identities=20% Similarity=0.188 Sum_probs=218.8
Q ss_pred CCCCCCCCC-----CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCEEEEEECCCCHHHHHHH
Q ss_conf 665898999-----999654569988886312598414666434300686412124544088510897075208999999
Q 003597 245 WNLNNLPRL-----PGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKA 319 (808)
Q Consensus 245 WNLnnLp~l-----~gSLL~~~~~~I~GVttP~LYiGM~fStf~WH~ED~~LySINYlH~GapK~WY~VP~~~aekFE~l 319 (808)
.+|+.||.. .|+||+|++..|+|||+||||+||+||+||||+||++|+||||||+|++|+||+||++++++||++
T Consensus 206 ~eL~kLP~flr~~~~gslLs~l~~~I~GVNtpqLYigm~gS~t~wH~Ed~~l~SINynhggg~c~WY~VP~e~~~k~e~l 285 (510)
T 4ask_A 206 QELLKLPAFMRVTSTGNMLSHVGHTILGMNTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFAVHEHYWETISAF 285 (510)
T ss_dssp HHGGGSCGGGSSSCTTBGGGGSSSCCTTTTSCEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGGHHHHHHH
T ss_pred HHHHHCCHHHCCCCCCCHHHHCCCCCCCCCHHHEEECCCCCCCCCEECCCCCEEEEEEECCCCEEEEEECHHHHHHHHHH
T ss_conf 99850949767588776455188767886763468704666655220677432278752688606999889999999999
Q ss_pred HHHHCCHHHHCCCHHHHHCCCCCCHHHHHHCCCCEEEEECCCCCEEEECCCCCEEEEECCCCEEEEECCCCCCH--HHHH
Q ss_conf 99525311303910110000256903275179980675117993999748841035305532034322455315--6458
Q 003597 320 MRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDW--LAHG 397 (808)
Q Consensus 320 lk~~~p~~f~~~pd~L~hl~~~isP~~L~~~GIpv~r~vQ~pGEFVVTfP~aYHsgfn~GfN~aEAVNFA~~dW--L~~g 397 (808)
+++.. +++++. .+|++|+.|+++||||||++|+||||||||||+||||||.||++++|||||+++| ++.+
T Consensus 286 ~~k~~-------~d~l~~-~~~pspe~L~kagIPvyr~iQkPGdfVit~PgtyH~Vqs~Gf~~niaWNvap~t~~qlqlA 357 (510)
T 4ask_A 286 CDRHG-------VDYLTG-SWWPILDDLYASNIPVYRFVQRPGDLVWINAGTVHWVQATGWCNNIAWNVGPLTAYQYQLA 357 (510)
T ss_dssp HHHTT-------CCTTTS-CBCCCHHHHHHTTCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEECBSSHHHHHHH
T ss_pred HHHHC-------CCHHHC-CCCCCHHHHHHCCCCEEEEEECCCCEEEECCCCEEEEEECCEEEEEEEEECCCCHHHHHHH
T ss_conf 98748-------125651-5158999997589976999988998899899824789866700146787358988999999
Q ss_pred HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHH
Q ss_conf 99999998415989985889999999999999998854202588872001001452256999999999778410357303
Q 003597 398 QQAVELYSEQHRKTSLSHDKLLFGSVQAAIKALWELSVLQKKTPGNRKWKDACGKDGVLTKAIKTRVQMKKEGLQKLPSY 477 (808)
Q Consensus 398 ~~a~e~yr~~~r~~~fS~d~LL~~~A~~~~~~l~~l~l~~k~~~~~~~~~~~~~~d~il~~~~k~r~~~e~~~~~~l~~~ 477 (808)
.++.++|+..++.++|||++|+|+||+..... ++...+..+.| |...++. .+++...+.. .+
T Consensus 358 ~e~y~~n~~~~~~SivPm~~L~Wn~Ar~~k~~----------d~~l~~liK~~-----L~rSL~~-~~~~~d~~~~--~g 419 (510)
T 4ask_A 358 LERYEWNEVKNVKSIVPMIHVSWNVARTVKIS----------DPDLFKMIKFC-----LLQSMKH-CQVQRESLVR--AG 419 (510)
T ss_dssp HHHHHHHHHTTCCCSSCHHHHHHHHHHHCCCC----------CHHHHHHHHHH-----HHHHHHH-HHHHHHHHHH--HT
T ss_pred HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCC----------CHHHHHHHHHH-----HHHHHHH-HHHHHHHHHH--CC
T ss_conf 99999999849686357599999987521015----------98999999999-----9999999-9999999986--79
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCHHCCCCCCCC--C--CCCCCCCCHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHH
Q ss_conf 43310001358866533554432001000024545--7--9310013323215999996089996399999999999981
Q 003597 478 FKLQKMEIDFDLKTERECFSCFYDLHLSAAGCKCS--P--DRFACLKHANIFCSCEIDHRFVILRYSTDELNTLVEALEG 553 (808)
Q Consensus 478 ~~~~k~~~~~d~~der~C~~Ck~~cfLS~V~C~C~--~--~~~~CL~Ha~~lCsC~~~~~~LlyRYt~~EL~~lv~~l~~ 553 (808)
.++ +...+...+..+.|..|...+|.-...-.-+ + ..++|+.||.... -...+++++.+|+++||..+++.|..
T Consensus 420 ~~i-~~~~~~~~~~~~~C~~C~~evFn~l~v~~~~~~~~~~~v~C~~Ca~~~~-~~~~~~~vl~~y~~~~L~~iyD~f~l 497 (510)
T 4ask_A 420 KKI-AYQGRVKDEPAYYCNECDVEVFNILFVTSENGSRNTYLVHCEGCARRRS-AGLQGVVVLEQYRTEELAQAYDAFTL 497 (510)
T ss_dssp CCE-EECCCCTTCCCEECTTTCCEECSEEEEEECC----CEEEECHHHHHHST-TTTTTCEEEESSCHHHHHHHHHHCCC
T ss_pred CEE-EECCCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCCCCEECHHHHHHCC-CCCCEEEEEEECCHHHHHHHHHCEEE
T ss_conf 788-6558688876666689984778889997037887753338867541137-87654899997219999998747284
Q ss_pred CHH
Q ss_conf 102
Q 003597 554 GLD 556 (808)
Q Consensus 554 r~~ 556 (808)
...
T Consensus 498 ~~~ 500 (510)
T 4ask_A 498 APA 500 (510)
T ss_dssp CC-
T ss_pred CCC
T ss_conf 357
No 6
>2xxz_A Lysine-specific demethylase 6B; oxidoreductase, histone demethylation, oxygenase, chromatin modification; HET: 8XQ; 1.80A {Homo sapiens}
Probab=1.00 E-value=1 Score=357.30 Aligned_cols=161 Identities=25% Similarity=0.235 Sum_probs=145.4
Q ss_pred HHHHCCCCCCCCCCCC-----CCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEEEECCCEEEEEECCCC
Q ss_conf 2330167665898999-----99965456998888631259841466643430068641212454408851089707520
Q 003597 238 DQYAMSGWNLNNLPRL-----PGSVLAFEGSDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSH 312 (808)
Q Consensus 238 ~~y~~~~WNLnnLp~l-----~gSLL~~~~~~I~GVttP~LYiGM~fStf~WH~ED~~LySINYlH~GapK~WY~VP~~~ 312 (808)
+.+...-.+|+.||.. .+|||+|++..|+|||+||||+||+||+||||+||++|+||||||+|++|+||+||+++
T Consensus 165 ~~w~~q~~el~kLP~~lr~~~~gslL~~~~~~I~Gvn~pqLYig~~gS~t~~H~Ed~~l~SiNynhgp~~~~Wy~VP~e~ 244 (332)
T 2xxz_A 165 KRWKPQLQELLKLPAFMRVTSTGNMLSHVGHTILGMNTVQLYMKVPGSRTPGHQENNNFCSVNINIGPGDCEWFAVHEHY 244 (332)
T ss_dssp HHHHHHHHHHTTSCGGGCTTTTCCCSEETTEECCCTTSEEEEEECTTCEEEEECCGGGCEEEEEEEEESCEEEEEECGGG
T ss_pred HHHHHHHHHHHHCCHHHCCCCCCCHHHHCCCCCCCCCHHHEEEECCCCCCCCEECCCCCEEEEEECCCCCEEEEEECHHH
T ss_conf 66699999986585966536753256626876788674455750676555515517734368862278761799977999
Q ss_pred HHHHHHHHHHHCCHHHHCCCHHHHHCCCCCCHHHHHHCCCCEEEEECCCCCEEEECCCCCEEEEECCCCEEEEECCCCCC
Q ss_conf 89999999952531130391011000025690327517998067511799399974884103530553203432245531
Q 003597 313 ASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEGVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVD 392 (808)
Q Consensus 313 aekFE~llk~~~p~~f~~~pd~L~hl~~~isP~~L~~~GIpv~r~vQ~pGEFVVTfP~aYHsgfn~GfN~aEAVNFA~~d 392 (808)
+++||++|++..+ ++++. .+|++|+.|.++||||||++|+|||||||||||||||||+|||++||||||+++
T Consensus 245 ~~~~e~l~~k~~~-------d~~~~-~~~~~p~~L~~~gIPvyr~~QkpGd~Vi~~PgayH~v~n~G~~~n~awN~a~~~ 316 (332)
T 2xxz_A 245 WETISAFCDRHGV-------DYLTG-SWWPILDDLYASNIPVYRFVQRPGDLVWINAGTVHWVQATGWCNNIAWNVGPLT 316 (332)
T ss_dssp HHHHHHHHHHTTC-------CTTTS-CBCCCHHHHHHTTCCCEEEEECTTCEEEECTTCEEEEEESSSEEEEEEEEESCT
T ss_pred HHHHHHHHHHCCC-------CHHHC-EECCCHHHHHHCCCCEEEEEECCCCEEEECCCCEEEEEECCEEEEEEEEECCCC
T ss_conf 9999999986497-------63215-021789999768997599997799889989985277874541247779717886
Q ss_pred HHHHHHHHHHHHHHC
Q ss_conf 564589999999841
Q 003597 393 WLAHGQQAVELYSEQ 407 (808)
Q Consensus 393 WL~~g~~a~e~yr~~ 407 (808)
|+++ +.|+++|+..
T Consensus 317 ~~q~-~~a~erye~n 330 (332)
T 2xxz_A 317 AYQY-QLALERYEWN 330 (332)
T ss_dssp TGGG-GGC-------
T ss_pred HHHH-HHHHHHHHHH
T ss_conf 7899-9999998761
No 7
>2ypd_A Probable JMJC domain-containing histone demethyla PROT EIN 2C; oxidoreductase; 2.10A {Homo sapiens}
Probab=1.00 E-value=1 Score=70.23 Aligned_cols=104 Identities=13% Similarity=0.124 Sum_probs=83.5
Q ss_pred EEEEEECCCCHHHHHHHHHHHCCHHH---HCCCHHHHHCCCCCCHH----HHHHCCCCEEEEECCCCCEEEECCCCCEEE
Q ss_conf 10897075208999999995253113---03910110000256903----275179980675117993999748841035
Q 003597 303 KIWYGVPGSHASTLEKAMRKHLPDLF---EEQPDLLHELVTQLSPS----VLKAEGVPVYHVVQHSGEFVLTFPRAYHSG 375 (808)
Q Consensus 303 K~WY~VP~~~aekFE~llk~~~p~~f---~~~pd~L~hl~~~isP~----~L~~~GIpv~r~vQ~pGEFVVTfP~aYHsg 375 (808)
-+|-...+.+++|+.++++++..+.. ....+-++...+.++.. ...+.||..+.++|++||+|++-+|++|.+
T Consensus 234 AlW~Ifr~~D~~klr~~L~~~~~e~~~~~~~~~dPihdq~~yL~~~~r~~L~ee~gv~~~~~~Q~~GeavfiPaG~~HQV 313 (392)
T 2ypd_A 234 ALWHIYAGKDVDKIREFLQKISKEQGLEVLPEHDPIRDQSWYVNKKLRQRLLEEYGVRTCTLIQFLGDAIVLPAGALHQV 313 (392)
T ss_dssp EEEEEECGGGHHHHHHHHHHHHHHHC------CCHHHHTCCCCCHHHHHHHHHHHCCCCEEEEEETTCEEEECTTCEEEE
T ss_pred CEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECHHHHHHHHHHCCCEEEEEEECCCCEEEECCCCHHHH
T ss_conf 45654577669999999999988649876677786768887866999999987519704899973787799669978887
Q ss_pred EECCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 3055320343224553156458999999984
Q 003597 376 FNCGFNCAEAVNVAPVDWLAHGQQAVELYSE 406 (808)
Q Consensus 376 fn~GfN~aEAVNFA~~dWL~~g~~a~e~yr~ 406 (808)
.|..-++..|+||..+.-+.....-.+-+|.
T Consensus 314 ~Nl~~~i~va~df~spe~~~~c~~lt~E~R~ 344 (392)
T 2ypd_A 314 QNFHSCIQVTEDFVSPEHLVESFHLTQELRL 344 (392)
T ss_dssp EESSEEEEEEEEECCGGGHHHHHHHHHHC--
T ss_pred HCCCCHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_conf 5202214576522684219999997899862
No 8
>3kv4_A PHD finger protein 8; epigenetics, histone CODE, covalent histone modifications, jumonji demethylase, mental retardation, metal-binding, zinc; HET: M3L MLY OGA; 2.19A {Homo sapiens}
Probab=1.00 E-value=1 Score=66.67 Aligned_cols=147 Identities=11% Similarity=0.007 Sum_probs=107.1
Q ss_pred EEEEECCCCCCCCCCCCCCCEEEEEEEECCCEEEEEECCCCHHHHHHHHHHHCCHHHHCCCHHHHHCCCCCCHHHHHHCC
Q ss_conf 59841466643430068641212454408851089707520899999999525311303910110000256903275179
Q 003597 272 WLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAEG 351 (808)
Q Consensus 272 ~LYiGM~fStf~WH~ED~~LySINYlH~GapK~WY~VP~~~aekFE~llk~~~p~~f~~~pd~L~hl~~~isP~~L~~~G 351 (808)
|+++|..+|.+.+|.+-....+.+.+..| -|.||.+||.... +. +.+.... ..+ +...++ + ...
T Consensus 234 ~~~mG~~gS~T~~HiD~~~ts~w~~vi~G-rK~w~L~PPt~~n-l~-~~~~~~~----s~~----~~~~~~-~----~~~ 297 (447)
T 3kv4_A 234 YCLMSVRDSYTDFHIDFGGTSVWYHVLKG-EKIFYLIRPTNAN-LT-LFECWSS----SSN----QNEMFF-G----DQV 297 (447)
T ss_dssp EEEEECTTEEEEEECCGGGCEEEEEEEES-EEEEEEECCCHHH-HH-HHHHHHT----CSS----GGGSCG-G----GGS
T ss_pred EEEEECCCCCCCEEECCCCCCEEEEEEEE-EEEEEEECCCCCC-CC-CHHHCCC----CCC----HHHHHC-C----CCC
T ss_conf 99981899889866899998345898601-7999996987245-44-2011135----753----023340-5----545
Q ss_pred CCEEEEECCCCCEEEECCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCC--C-CHHHHHHHHHHHHHH
Q ss_conf 9806751179939997488410353055320343224553156458999999984159899--8-588999999999999
Q 003597 352 VPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTS--L-SHDKLLFGSVQAAIK 428 (808)
Q Consensus 352 Ipv~r~vQ~pGEFVVTfP~aYHsgfn~GfN~aEAVNFA~~dWL~~g~~a~e~yr~~~r~~~--f-S~d~LL~~~A~~~~~ 428 (808)
...++++|+|||.+++-.|-+|+++|...+++..-||.+..-++.-....+.=+..+.+.- | .++.++|-+|.....
T Consensus 298 ~~~~~v~l~pGetlfIPsGWwH~V~nledsIai~~NF~~~~nl~~~l~~~~~E~~~~~~~~~~~p~f~~~~w~~~~~~~~ 377 (447)
T 3kv4_A 298 DKCYKCSVKQGQTLFIPTGWIHAVLTPVDCLAFGGNFLHSLNIEMQLKAYEIEKRLSTADLFRFPNFETICWYVGKHILD 377 (447)
T ss_dssp SCCEEEEEETTCEEEECTTCEEEEEESSCEEEEEEEECCSTTHHHHHHHHHHHHHTTCCGGGSCTTHHHHHHHHHHHHHH
T ss_pred CCEEEEEECCCCEEECCCCCEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 64399998898678638997688863788799815434634799999999999860797423266879999999999999
Q ss_pred HHHHHH
Q ss_conf 999885
Q 003597 429 ALWELS 434 (808)
Q Consensus 429 ~l~~l~ 434 (808)
.+.++.
T Consensus 378 ~~~~~~ 383 (447)
T 3kv4_A 378 IFRGLR 383 (447)
T ss_dssp HHHHHH
T ss_pred HHHHHH
T ss_conf 988787
No 9
>3k3o_A PHF8, PHD finger protein 8; histone demethylase, chromatin modification, methylated H3K9, mental retardation, metal-BI phosphoprotein, zinc-finger; HET: AKG; 2.10A {Homo sapiens} PDB: 3k3n_A* 4do0_A* 2wwu_A*
Probab=1.00 E-value=1 Score=66.28 Aligned_cols=147 Identities=11% Similarity=0.014 Sum_probs=106.5
Q ss_pred CEEEEECCCCCCCCCCCCCCCEEEEEEEECCCEEEEEECCCCHHHHHHHHHHHCCHHHHCCCHHHHHCCCCCCHHHHHHC
Q ss_conf 25984146664343006864121245440885108970752089999999952531130391011000025690327517
Q 003597 271 PWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAE 350 (808)
Q Consensus 271 P~LYiGM~fStf~WH~ED~~LySINYlH~GapK~WY~VP~~~aekFE~llk~~~p~~f~~~pd~L~hl~~~isP~~L~~~ 350 (808)
-|+++|..+|.+.+|.+-....+-+.+..| -|.||.+||.... +. +.+.... ... +...++ + ..
T Consensus 149 r~l~mGp~gS~T~~HiD~~gts~w~~vv~G-rK~w~L~PPt~~n-l~-~y~~~~~-----s~~---~~e~~~-~----~~ 212 (371)
T 3k3o_A 149 KYCLMSVRDSYTDFHIDFGGTSVWYHVLKG-EKIFYLIRPTNAN-LT-LFECWSS-----SSN---QNEMFF-G----DQ 212 (371)
T ss_dssp CEEEEECTTEEEEEECCGGGCEEEEEEEEE-EEEEEEECCCHHH-HH-HHHHHHT-----STT---GGGSCG-G----GT
T ss_pred EEEEECCCCCCCCEEECCCCCCEEEEEEEE-EEEEEEECCCCCC-CC-CCCCCCC-----CCC---CCHHHC-C----CC
T ss_conf 699980899889867889998434788645-7999997977024-45-4544556-----776---003440-6----65
Q ss_pred CCCEEEEECCCCCEEEECCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCC--C-CHHHHHHHHHHHHH
Q ss_conf 99806751179939997488410353055320343224553156458999999984159899--8-58899999999999
Q 003597 351 GVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTS--L-SHDKLLFGSVQAAI 427 (808)
Q Consensus 351 GIpv~r~vQ~pGEFVVTfP~aYHsgfn~GfN~aEAVNFA~~dWL~~g~~a~e~yr~~~r~~~--f-S~d~LL~~~A~~~~ 427 (808)
....++++|+|||.+++-.|-+|+++|...+++..-||....=++.-..+.+.=+..+.+.. | .++.++|-+|....
T Consensus 213 ~~~~~ev~l~pGEtLfIPsGWwH~V~nledSIai~~NFl~~~nl~~~l~~~~~E~~~~~~~~f~fp~F~~~~w~~~~~~~ 292 (371)
T 3k3o_A 213 VDKCYKCSVKQGQTLFIPTGWIHAVLTPVDCLAFGGNFLHSLNIEMQLKAYEIEKRLSTADLFRFPNFETICWYVGKHIL 292 (371)
T ss_dssp SSCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCSTTHHHHHHHHHHHHHHC----CCCTTHHHHHHHHHHHHH
T ss_pred CCCEEEEEECCCCEEEECCCCEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 67449999888857870799759875688869988754663428999999879975399854426667988999999999
Q ss_pred HHHHHH
Q ss_conf 999988
Q 003597 428 KALWEL 433 (808)
Q Consensus 428 ~~l~~l 433 (808)
..+.++
T Consensus 293 ~~~~~~ 298 (371)
T 3k3o_A 293 DIFRGL 298 (371)
T ss_dssp HHHHHH
T ss_pred HHHHHH
T ss_conf 999988
No 10
>3kv5_D JMJC domain-containing histone demethylation protein 1D; epigenetics, histone CODE, jumonji lysine demethylase, metal-binding, zinc, zinc-finger; HET: OGA; 2.39A {Homo sapiens} PDB: 3kv6_A*
Probab=1.00 E-value=1 Score=65.77 Aligned_cols=147 Identities=12% Similarity=0.072 Sum_probs=107.3
Q ss_pred CEEEEECCCCCCCCCCCCCCCEEEEEEEECCCEEEEEECCCCHHHHHHHHHHHCCHHHHCCCHHHHHCCCCCCHHHHHHC
Q ss_conf 25984146664343006864121245440885108970752089999999952531130391011000025690327517
Q 003597 271 PWLYVGMCFSSFCWHVEDHHLYSLNYLHWGDPKIWYGVPGSHASTLEKAMRKHLPDLFEEQPDLLHELVTQLSPSVLKAE 350 (808)
Q Consensus 271 P~LYiGM~fStf~WH~ED~~LySINYlH~GapK~WY~VP~~~aekFE~llk~~~p~~f~~~pd~L~hl~~~isP~~L~~~ 350 (808)
-|+++|..+|.+.+|.+-....+.+.+..| -|.|+.+||..... .+.+... ...++ ...+ +...
T Consensus 268 r~~~mG~~gS~T~~H~D~~~t~~w~~vv~G-~K~w~L~PPt~~~~--~~y~~~~----~~~~~----~~~~-----~~~~ 331 (488)
T 3kv5_D 268 KYCLMGVQDSYTDFHIDFGGTSVWYHVLWG-EKIFYLIKPTDENL--ARYESWS----SSVTQ----SEVF-----FGDK 331 (488)
T ss_dssp CEEEEECTTCEEEEECCGGGCEEEEEEEEE-EEEEEEECCCHHHH--HHHHHHH----TCSSG----GGSC-----GGGS
T ss_pred EEEEECCCCCCCCEEECCCCCCEEEECCCE-EEEEEEECCCCCCC--CCCCCCC----CCCCC----CHHH-----HCCC
T ss_conf 389982899889867889998265541670-58999969862463--4355445----57762----1334-----3113
Q ss_pred CCCEEEEECCCCCEEEECCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCC---CHHHHHHHHHHHHH
Q ss_conf 998067511799399974884103530553203432245531564589999999841598998---58899999999999
Q 003597 351 GVPVYHVVQHSGEFVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQQAVELYSEQHRKTSL---SHDKLLFGSVQAAI 427 (808)
Q Consensus 351 GIpv~r~vQ~pGEFVVTfP~aYHsgfn~GfN~aEAVNFA~~dWL~~g~~a~e~yr~~~r~~~f---S~d~LL~~~A~~~~ 427 (808)
....++++|+|||.+++-.|=+|+++|...+++..-||....=++.-..+.+.=+..+.+..| -+++|+|-+|....
T Consensus 332 ~~~~~~~~l~pGe~lfIPsGWwH~V~nledsIai~~NF~~~~nl~~~l~~~~~e~~~~~~~~~~~p~f~~~~w~~~~~~l 411 (488)
T 3kv5_D 332 VDKCYKCVVKQGHTLFVPTGWIHAVLTSQDCMAFGGNFLHNLNIGMQLRCYEMEKRLKTPDLFKFPFFEAICWFVAKNLL 411 (488)
T ss_dssp SSCCEEEEEETTCEEEECTTCEEEEEEEEEEEEEEEEECCSTTHHHHHHHHHHHHHTTCCTTSSCTTHHHHHHHHHHHHH
T ss_pred CCCEEEEEECCCCEEEECCCCEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 55338986178877876799648862788848976653775679999999999985088633647368999999999999
Q ss_pred HHHHHH
Q ss_conf 999988
Q 003597 428 KALWEL 433 (808)
Q Consensus 428 ~~l~~l 433 (808)
..+.++
T Consensus 412 ~~~~~~ 417 (488)
T 3kv5_D 412 ETLKEL 417 (488)
T ss_dssp HHHHHH
T ss_pred HHHHHH
T ss_conf 999998
Done!