BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003601
(808 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZTS1|SYM_ORYSJ Probable methionine--tRNA ligase OS=Oryza sativa subsp. japonica
GN=Os06g0508700 PE=2 SV=2
Length = 801
Score = 1298 bits (3360), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 610/791 (77%), Positives = 691/791 (87%), Gaps = 5/791 (0%)
Query: 20 GKRNILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETK 79
G+RNIL+TSALPYVNNVPHLGNIIG VLSADVFAR+CRLRGYN IYICGTDEYGTATETK
Sbjct: 14 GRRNILVTSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNVIYICGTDEYGTATETK 73
Query: 80 AMEDNCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIE 139
AME+ CSPKEICDKYH +H +VYKWFDI FD FGRTS+PQQTE CQAIF+KL++NNWL E
Sbjct: 74 AMEEKCSPKEICDKYHAVHSEVYKWFDIKFDKFGRTSSPQQTEVCQAIFQKLMENNWLTE 133
Query: 140 NTMQQPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCR 199
NTMQQ YCDTC+RFLADRLVEG CP EGCNYE+ARGDQCENC KLLN T+L DPKCKVC+
Sbjct: 134 NTMQQLYCDTCQRFLADRLVEGKCPTEGCNYEAARGDQCENCSKLLNPTELIDPKCKVCK 193
Query: 200 NAPQIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDL 259
N P++RDT+HLFL+LP L +KL YIN SVAG WSQNAIQAT+AWLKEGLK RCITRDL
Sbjct: 194 NTPRVRDTDHLFLELPLLSDKLVNYINETSVAGMWSQNAIQATNAWLKEGLKPRCITRDL 253
Query: 260 KWGVPVPLERFKEKVFYVWFDAPIGYVSITSCYTNEWEQWWKNPENVELYQFMGKDNVPF 319
KWGVPVP E++K+KVFYVWFDAPIGYVSIT+ YT +WE+WWK+P+NVEL+QFMGKDNVPF
Sbjct: 254 KWGVPVPHEKYKDKVFYVWFDAPIGYVSITASYTPDWEKWWKDPDNVELFQFMGKDNVPF 313
Query: 320 HTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDTNIPVEVWRY 379
HTVMFPSTLLGTGE WT+MKTISVTEYLNYE+GKFSKS GIGVFGNDAKDTNIP EVWRY
Sbjct: 314 HTVMFPSTLLGTGEKWTMMKTISVTEYLNYEAGKFSKSHGIGVFGNDAKDTNIPPEVWRY 373
Query: 380 YLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIVPDANGA 439
YLLTNRPEVSDTLFTWADLQAK N+ELLNNLGNFINRVLSF+AKP G GY SIVPDA A
Sbjct: 374 YLLTNRPEVSDTLFTWADLQAKLNSELLNNLGNFINRVLSFVAKPAGAGYDSIVPDAPNA 433
Query: 440 ESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLYKEDQ 499
ESH LTK L EK K+VEQYLEAMEKVKLKQGLK+AM ISS+GNAYLQESQFWKLYKED
Sbjct: 434 ESHPLTKALVEKTNKWVEQYLEAMEKVKLKQGLKSAMGISSDGNAYLQESQFWKLYKEDP 493
Query: 500 PSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCDEKGDVDRARRPW 559
+C++VM+TSVG+V+LLACLLEPFMPSFS EV QLN+ PE+ +S CD+KG++ +A+RPW
Sbjct: 494 AACAVVMKTSVGVVYLLACLLEPFMPSFSNEVLLQLNMTPEESLSFCDDKGEIAKAKRPW 553
Query: 560 EIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQADRIIRAE--AEAAKTAEQLKKTKI 617
+ + AGHKIG P+PLFKELKD+EVE FR+KFAGSQA+R +A+ AEA K A++LK TK+
Sbjct: 554 DFVSAGHKIGKPSPLFKELKDEEVESFRNKFAGSQAERSSKAQADAEAKKVADKLKGTKL 613
Query: 618 SVDGGGKKQKSAKSTAGAKSKTTAEPEISIARLDIRVGKITKVQKHPDADALYVEEIDVG 677
S GG+K++ K + G+KSK AE ++++A+LDIRVG I K QKHPDAD+LYVEEIDVG
Sbjct: 614 S--DGGQKKEQKKQSGGSKSK-NAEVDVTVAKLDIRVGLIRKAQKHPDADSLYVEEIDVG 670
Query: 678 EVQPRTVVSGLVKHIPLEEMQERMVCVLCNLKPVAMRGIKSHAMVLCASTSDNTKVELVE 737
E PRTVVSGLVK IPLEEMQ R VCVLCNLKPVAMRGIKSHAMVL AS D+TKVELVE
Sbjct: 671 EEAPRTVVSGLVKFIPLEEMQNRKVCVLCNLKPVAMRGIKSHAMVLAASNEDHTKVELVE 730
Query: 738 PPKSAKIGERVAFPGFEGEPDDVLNPKKKVWETVQVDLHTNTELVACYKDIPFTTSAGIC 797
PP+SA +GERV F G+ GEP+ LN K K WE + DLH+N ELVACYKD+PFTTSAG+C
Sbjct: 731 PPESAAVGERVTFAGYSGEPEASLNAKSKTWEKLSADLHSNGELVACYKDVPFTTSAGVC 790
Query: 798 TVSSIQSGSIR 808
V SI SG IR
Sbjct: 791 KVKSIASGEIR 801
>sp|Q9SVN5|SYM_ARATH Probable methionine--tRNA ligase OS=Arabidopsis thaliana
GN=At4g13780 PE=2 SV=1
Length = 797
Score = 1295 bits (3352), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 618/803 (76%), Positives = 694/803 (86%), Gaps = 8/803 (0%)
Query: 7 ENPAAPPPKLPIPGKRNILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYI 66
E+ PKLPIPGKRNILITSALPYVNNVPHLGNIIG VLSADV+AR+CRLRGYNAIYI
Sbjct: 2 EDDGKSSPKLPIPGKRNILITSALPYVNNVPHLGNIIGCVLSADVYARYCRLRGYNAIYI 61
Query: 67 CGTDEYGTATETKAMEDNCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQA 126
CGTDEYGTATETKA+E+NC+PKEICDKYH IHK+VY WF ISFD FGRTSTP+QTE CQA
Sbjct: 62 CGTDEYGTATETKALEENCTPKEICDKYHAIHKEVYDWFGISFDKFGRTSTPEQTEVCQA 121
Query: 127 IFKKLLDNNWLIENTMQQPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLN 186
IF KL DN WL ENTMQQ YCDTCK+FLADRLVEG+CPFEGCNY+SARGDQCE CGKLLN
Sbjct: 122 IFNKLWDNKWLSENTMQQLYCDTCKKFLADRLVEGSCPFEGCNYDSARGDQCEKCGKLLN 181
Query: 187 ATDLKDPKCKVCRNAPQIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWL 246
T+LKDPKCKVC+N P+IRDT+HLF++LP L+++LE YI SV GSWSQNAIQ T+AWL
Sbjct: 182 PTELKDPKCKVCQNTPRIRDTDHLFIELPLLKDRLEAYIKKTSVTGSWSQNAIQTTNAWL 241
Query: 247 KEGLKVRCITRDLKWGVPVPLERFKEKVFYVWFDAPIGYVSITSCYTNEWEQWWKNPENV 306
++GL+ RCITRDLKWGVPVP E++K+KVFYVWFDAPIGYVSITSCYT+EWE+WWKNPENV
Sbjct: 242 RDGLRQRCITRDLKWGVPVPHEKYKDKVFYVWFDAPIGYVSITSCYTSEWEKWWKNPENV 301
Query: 307 ELYQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGND 366
ELYQFMGKDNVPFHTVMFPST LGT ENWTLMKTISVTEYLNYE GKFSKSKG+GVFGND
Sbjct: 302 ELYQFMGKDNVPFHTVMFPSTQLGTEENWTLMKTISVTEYLNYEDGKFSKSKGVGVFGND 361
Query: 367 AKDTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPG 426
KDTNIPVEVWRYYLLTNRPEVSDT F+W DLQAK N ELL+NLGNF+NRVLSFIAKP
Sbjct: 362 VKDTNIPVEVWRYYLLTNRPEVSDTSFSWTDLQAKLNGELLSNLGNFVNRVLSFIAKPDN 421
Query: 427 QGYGSIVPDANGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYL 486
GYGS++PDA+ AESH LTK+LAEKV K+V +Y+EAMEKVKLKQGLKTAM ISSEGN YL
Sbjct: 422 AGYGSVIPDAHDAESHSLTKSLAEKVEKFVAEYVEAMEKVKLKQGLKTAMLISSEGNYYL 481
Query: 487 QESQFWKLYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLC 546
Q SQFWKLYKED+P C++V+RT+ GLVHLLA LLEPFMPSFS EV KQLNL P+ SL
Sbjct: 482 QASQFWKLYKEDKPLCAVVIRTAAGLVHLLAQLLEPFMPSFSCEVFKQLNLPPQ--FSLS 539
Query: 547 DEKGDVDRARRPWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQADRIIRAEAEAA 606
DE+G+V A RPW+I+P H+IG+P PLFKEL++DEV +R KFAGSQ+DR RA EAA
Sbjct: 540 DERGEVLLASRPWDILPPSHRIGTPQPLFKELENDEVARYREKFAGSQSDR--RARDEAA 597
Query: 607 KTAEQLKKTKISVDGGGKKQKSAKSTAGA-KSKTTAEPEISIARLDIRVGKITKVQKHPD 665
A+QL KTK+S KKQK++ G K + A+ EI++ARLDIRVGKI K +KHP
Sbjct: 598 NLADQLNKTKLS---DAKKQKASSKGGGKPKPQPAADREITMARLDIRVGKIVKAEKHPK 654
Query: 666 ADALYVEEIDVGEVQPRTVVSGLVKHIPLEEMQERMVCVLCNLKPVAMRGIKSHAMVLCA 725
ADALYVEEIDVG + RTVVSGLVK+IPLEEMQ RMVCVLCNLKP MR I S AMVL A
Sbjct: 655 ADALYVEEIDVGGGEIRTVVSGLVKYIPLEEMQNRMVCVLCNLKPAKMRDIVSQAMVLAA 714
Query: 726 STSDNTKVELVEPPKSAKIGERVAFPGFEGEPDDVLNPKKKVWETVQVDLHTNTELVACY 785
S+SD +KVELVEPPK+A IGERV FPGFEGEPDDVLNPKKKVWET+ VDL+T LVACY
Sbjct: 715 SSSDGSKVELVEPPKTANIGERVTFPGFEGEPDDVLNPKKKVWETLLVDLNTKENLVACY 774
Query: 786 KDIPFTTSAGICTVSSIQSGSIR 808
KD+PFTTSAG+C VSSI +G+IR
Sbjct: 775 KDVPFTTSAGVCKVSSISNGTIR 797
>sp|Q54X95|SYMC_DICDI Probable methionine--tRNA ligase, cytoplasmic OS=Dictyostelium
discoideum GN=metS PE=3 SV=1
Length = 736
Score = 735 bits (1898), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/806 (46%), Positives = 516/806 (64%), Gaps = 79/806 (9%)
Query: 9 PAAPPPKLPIPGKRNILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICG 68
P+ PP LP G+RNILITSALPYVNNVPHLGNIIG VLSADV+AR+CRL+ YN IYICG
Sbjct: 4 PSNTPP-LPKDGERNILITSALPYVNNVPHLGNIIGCVLSADVYARYCRLKNYNCIYICG 62
Query: 69 TDEYGTATETKAMEDNCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIF 128
TDEYGTATETKA+ + C+PKEICDKYH IHK++Y+WF+ISFD FGRTST QTE Q IF
Sbjct: 63 TDEYGTATETKALSEGCTPKEICDKYHEIHKEIYEWFNISFDKFGRTSTNSQTEIAQDIF 122
Query: 129 KKLLDNNWLIENTMQQPYCD-TCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNA 187
K+ DN + + ++Q YC+ TCK FLADR VEGTCP C +E ARGDQC+ C KLLN
Sbjct: 123 NKIKDNGYTLTQEIEQLYCEQTCKMFLADRFVEGTCPH--CKFEDARGDQCDGCSKLLNP 180
Query: 188 TDLKDPKCKVCRNAPQIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLK 247
T+L +P+CKVC P I+ T H+F+DLP L+ ++++++ S G+WS+N+I T+ W+K
Sbjct: 181 TELINPRCKVCSKPPVIKSTKHIFIDLPQLQQQVDQFVETNSKGGNWSENSIAITNTWVK 240
Query: 248 EGLKVRCITRDLKWGVPVPLERFKEKVFYVWFDAPIGYVSITSCYTNEWEQWWKNPENVE 307
LK RCITRDLKWG PVP+E FK+KVFYVWFDAPIGY+SIT+ YTNEWE+WWKNPENV+
Sbjct: 241 GELKPRCITRDLKWGTPVPMEEFKDKVFYVWFDAPIGYISITAEYTNEWEKWWKNPENVK 300
Query: 308 LYQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDA 367
L QFMGKDNVPFHTV+FP++L+G+ +N+TL+ +S TE+LNYE+GKFSKS+ GVFG+ A
Sbjct: 301 LVQFMGKDNVPFHTVIFPASLIGSKDNYTLLNNLSTTEFLNYETGKFSKSRNTGVFGDGA 360
Query: 368 KDTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQ 427
K T IP EVWR+YLL NRPE SD++F+W D K NNELLNN GN +NRVL +
Sbjct: 361 KATGIPSEVWRFYLLNNRPESSDSIFSWDDFNFK-NNELLNNFGNLVNRVLKMLNT--NA 417
Query: 428 GYGSIVPDANGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQ 487
+ +VP E +++ K L ++V +++ QY + +E++ LK+GLK AMSIS GN Y+Q
Sbjct: 418 AFNGVVPKI--GELNEVDKKLVQEVDEHLVQYFQKLEEISLKEGLKIAMSISKLGNTYMQ 475
Query: 488 ESQFWKLYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCD 547
+++ W L +D C V+ + L+ LL+ LLEP++PS + +V++QLN++P K+ + D
Sbjct: 476 DNKPWDLSGKDNERCGQVLAILINLIKLLSTLLEPYIPSLTDKVHQQLNVEPTKYSTHFD 535
Query: 548 EKGDVDRARRPWEIIPAGHKIGSPN-PLFKELKDDEVEFFRSKFAGSQADRIIRAEAEAA 606
IPAGH+I PL K+++ D+++ +R+KF+G
Sbjct: 536 INA-----------IPAGHEISKEILPLVKKIEADDLKKWRTKFSG-------------- 570
Query: 607 KTAEQLKKTKISVDGGGKKQKSAKSTAGAKSKTTAEPEISIARLDIRVGKITKVQKHPDA 666
PE I D+++ + +V HP A
Sbjct: 571 ----------------------------------IGPEFPI---DMKIATVLEVNDHPSA 593
Query: 667 DALYVEEIDVGEVQPRTVVSGLVKHIPLEEMQERMVCVLCNLKPVAMRGIKSHAMVLCAS 726
+ LYV ++ +G Q +T VSG+ + ++ + + V+ NLKP +G+ S AM+L A
Sbjct: 594 ENLYVIKLSLGGDQTKTAVSGIKANFEKSQLIGKKLAVVLNLKPSKFKGVLSEAMILVAD 653
Query: 727 TSDNTKVELV----EPPKSAKIGERVAFPGFEGEPDDVLNPKKKVWETVQVDLHTNTELV 782
TK L P+S + G ++A G +P ++ +K E + DL +++
Sbjct: 654 DGQATKESLSFLVPSNPQSIEAGSKIAGKGMSIKPKPTIDYQK---EFLHYDLTCIDKII 710
Query: 783 ACYKDIPFTTSAGICTVSSIQSGSIR 808
+ K F I +G +R
Sbjct: 711 SYNKSQLFINQNEPLVSEKIGNGKVR 736
>sp|Q68FL6|SYMC_MOUSE Methionine--tRNA ligase, cytoplasmic OS=Mus musculus GN=Mars PE=2
SV=1
Length = 902
Score = 686 bits (1771), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/635 (51%), Positives = 437/635 (68%), Gaps = 24/635 (3%)
Query: 14 PKLPIPGKRNILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYG 73
P LP+PG+RN+LITSALPYVNNVPHLGNIIG VLSADVFAR+CRLR +N +Y+CGTDEYG
Sbjct: 258 PVLPVPGERNVLITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRQWNTLYLCGTDEYG 317
Query: 74 TATETKAMEDNCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLD 133
TATETKAME+ +P+EICDKYH IH D+Y+WF ISFD FGRT+TPQQT+ Q IF++LL
Sbjct: 318 TATETKAMEEGLTPREICDKYHAIHADIYRWFGISFDTFGRTTTPQQTKITQDIFQRLLT 377
Query: 134 NNWLIENTMQQPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDP 193
+++ +T++Q C+ C RFLADR VEG CPF C YE ARGDQC+ CGKL+NA +LK P
Sbjct: 378 RGFVLRDTVEQLRCERCARFLADRFVEGVCPF--CGYEEARGDQCDRCGKLINAIELKKP 435
Query: 194 KCKVCRNAPQIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVR 253
+CK+CR+ P +R + HLFLDLP L +LE+++ W+ NA +WL++GLK R
Sbjct: 436 QCKICRSCPVVRSSQHLFLDLPKLEKRLEDWLGKTVPGSDWTPNARFIIRSWLRDGLKPR 495
Query: 254 CITRDLKWGVPVPLERFKEKVFYVWFDAPIGYVSITSCYTNEWEQWWKNPENVELYQFMG 313
CITRDLKWG PVPLE F++KVFYVWFDA IGYVSIT+ YT++WE+WWKNPE V+LYQFM
Sbjct: 496 CITRDLKWGTPVPLEGFEDKVFYVWFDATIGYVSITANYTDQWEKWWKNPEQVDLYQFMA 555
Query: 314 KDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDTNIP 373
KDNVPFH ++FP ++LG +N+TL+K I TEYLNYE GKFSKS+GIGVFG+ AKDT IP
Sbjct: 556 KDNVPFHGLVFPCSVLGAEDNYTLVKHIIATEYLNYEDGKFSKSRGIGVFGDMAKDTGIP 615
Query: 374 VEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIV 433
++WR+YLL RPE D+ F+W DL K+N+ELLNNLGNFINR F++K +G V
Sbjct: 616 ADIWRFYLLYIRPEGQDSAFSWTDLLIKNNSELLNNLGNFINRAGMFVSK----FFGGCV 671
Query: 434 PDANGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWK 493
P+ + L V ++ Y + +EKV+++ L++ ++IS GN Y+Q ++ WK
Sbjct: 672 PEMALTPDD---RRLVAHVSWELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWK 728
Query: 494 LYK---EDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCDEKG 550
K D+ V +V + LL+ +L+P+MP+ S + QL L P L
Sbjct: 729 RIKGGEMDRQRAGTVTGMAVNMAALLSVMLQPYMPTVSSTIQTQLQLPPAACRIL----- 783
Query: 551 DVDRARRPWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQAD---RIIRAEAEAAK 607
A +PAGH+IG+ +PLF++L++D++E R +F G QA + EA A
Sbjct: 784 ----ATSFICTLPAGHRIGTVSPLFQKLENDQIENLRQRFGGGQAKGSPKPAAVEAVTAA 839
Query: 608 TAEQLKKTKISVDGGGKKQKSAKSTAGAKSKTTAE 642
++ ++ V G + K+ K++ AE
Sbjct: 840 GSQHIQTLTDEVTKQGNVVRELKAQKADKNQVAAE 874
>sp|Q2T9L8|SYMC_BOVIN Methionine--tRNA ligase, cytoplasmic OS=Bos taurus GN=MARS PE=2
SV=1
Length = 898
Score = 675 bits (1741), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 320/638 (50%), Positives = 436/638 (68%), Gaps = 32/638 (5%)
Query: 14 PKLPIPGKRNILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYG 73
P LP+ G+RN+LITSALPYVNNVPHLGNIIG VLSADVFAR+ RLR +N +Y+CGTDEYG
Sbjct: 256 PVLPVAGERNVLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYG 315
Query: 74 TATETKAMEDNCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLD 133
TATETKAME+ +P+EICDKYHVIH D+Y+WF+ISFD FGRT+TPQQT+ Q IF++LL
Sbjct: 316 TATETKAMEEGLTPQEICDKYHVIHADIYRWFNISFDFFGRTTTPQQTKITQDIFQRLLA 375
Query: 134 NNWLIENTMQQPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDP 193
+++++T++Q C+ C RFLADR VEG CPF C YE ARGDQC+ CGKL+NA +LK P
Sbjct: 376 RGFVLQDTVEQLRCEHCARFLADRFVEGVCPF--CGYEEARGDQCDKCGKLINAIELKKP 433
Query: 194 KCKVCRNAPQIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVR 253
+CKVCR+ P ++ + HLFLDLP L ++EE++ W+ NA +WL++GLK R
Sbjct: 434 QCKVCRSCPVVKSSQHLFLDLPKLAARVEEWLEKTLPGSDWTANARFIIRSWLRDGLKPR 493
Query: 254 CITRDLKWGVPVPLERFKEKVFYVWFDAPIGYVSITSCYTNEWEQWWKNPENVELYQFMG 313
CITRDLKWG PVPLE F++KVFYVWFDA IGY+SIT+ YT++WE+WWKNPE V LYQFM
Sbjct: 494 CITRDLKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWEKWWKNPEQVNLYQFMA 553
Query: 314 KDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDTNIP 373
KDNVPFH ++FPS+ LG +N+TL+ + TEYLNYE GKFSKS+G+GVFG+ A+DT IP
Sbjct: 554 KDNVPFHGIVFPSSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIP 613
Query: 374 VEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIV 433
++WR+YLL NRPE D+ F+W D+ K+N+ELLNNLGNFINR F++K +G V
Sbjct: 614 ADIWRFYLLYNRPEGQDSAFSWTDMLFKNNSELLNNLGNFINRAGMFVSK----FFGGFV 669
Query: 434 PDANGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWK 493
P+ Q L + ++ Y + +EKV+++ L++ ++IS GN Y+Q ++ WK
Sbjct: 670 PEMVLTSDDQ---RLLTHITLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWK 726
Query: 494 LYK---EDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEK-----HISL 545
K D+ V +V + LL+ +L+P+MP+ S + QL L P L
Sbjct: 727 RIKGGEADRQRAGTVTGLAVNIAALLSVMLQPYMPTVSATIQAQLQLPPPACSILPTNFL 786
Query: 546 CDEKGDVDRARRPWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQADRIIRAEAEA 605
C +PAGH+IG+ +PLF++L++D++E + +F+G QA + A
Sbjct: 787 C--------------TLPAGHQIGTVSPLFQKLENDQIESLKQRFSGGQAKASPKTAAGL 832
Query: 606 AKTA-EQLKKTKISVDGGGKKQKSAKSTAGAKSKTTAE 642
+Q++ V G + K+ K++ AE
Sbjct: 833 TTAGPQQIQALTEEVTKQGNIVRELKAQKADKNQIAAE 870
>sp|P56192|SYMC_HUMAN Methionine--tRNA ligase, cytoplasmic OS=Homo sapiens GN=MARS PE=1
SV=2
Length = 900
Score = 674 bits (1740), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 324/636 (50%), Positives = 440/636 (69%), Gaps = 26/636 (4%)
Query: 14 PKLPIPGKRNILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYG 73
P LP+ G+RN+LITSALPYVNNVPHLGNIIG VLSADVFAR+ RLR +N +Y+CGTDEYG
Sbjct: 256 PVLPVAGERNVLITSALPYVNNVPHLGNIIGCVLSADVFARYSRLRQWNTLYLCGTDEYG 315
Query: 74 TATETKAMEDNCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLD 133
TATETKA+E+ +P+EICDKYH+IH D+Y+WF+ISFD FGRT+TPQQT+ Q IF++LL
Sbjct: 316 TATETKALEEGLTPQEICDKYHIIHADIYRWFNISFDIFGRTTTPQQTKITQDIFQQLLK 375
Query: 134 NNWLIENTMQQPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDP 193
+++++T++Q C+ C RFLADR VEG CPF C YE ARGDQC+ CGKL+NA +LK P
Sbjct: 376 RGFVLQDTVEQLRCEHCARFLADRFVEGVCPF--CGYEEARGDQCDKCGKLINAVELKKP 433
Query: 194 KCKVCRNAPQIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVR 253
+CKVCR+ P ++ + HLFLDLP L +LEE++ W+ NA T +WL++GLK R
Sbjct: 434 QCKVCRSCPVVQSSQHLFLDLPKLEKRLEEWLGRTLPGSDWTPNAQFITRSWLRDGLKPR 493
Query: 254 CITRDLKWGVPVPLERFKEKVFYVWFDAPIGYVSITSCYTNEWEQWWKNPENVELYQFMG 313
CITRDLKWG PVPLE F++KVFYVWFDA IGY+SIT+ YT++WE+WWKNPE V+LYQFM
Sbjct: 494 CITRDLKWGTPVPLEGFEDKVFYVWFDATIGYLSITANYTDQWERWWKNPEQVDLYQFMA 553
Query: 314 KDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDTNIP 373
KDNVPFH+++FP + LG +N+TL+ + TEYLNYE GKFSKS+G+GVFG+ A+DT IP
Sbjct: 554 KDNVPFHSLVFPCSALGAEDNYTLVSHLIATEYLNYEDGKFSKSRGVGVFGDMAQDTGIP 613
Query: 374 VEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIV 433
++WR+YLL RPE D+ F+W DL K+N+ELLNNLGNFINR F++K +G V
Sbjct: 614 ADIWRFYLLYIRPEGQDSAFSWTDLLLKNNSELLNNLGNFINRAGMFVSK----FFGGYV 669
Query: 434 PDANGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWK 493
P+ Q L V ++ Y + +EKV+++ L++ ++IS GN Y+Q ++ WK
Sbjct: 670 PEMVLTPDDQ---RLLAHVTLELQHYHQLLEKVRIRDALRSILTISRHGNQYIQVNEPWK 726
Query: 494 LYK---EDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEK-HISLCDEK 549
K D+ V +V + LL+ +L+P+MP+ S + QL L P I L +
Sbjct: 727 RIKGSEADRQRAGTVTGLAVNIAALLSVMLQPYMPTVSATIQAQLQLPPPACSILLTNFL 786
Query: 550 GDVDRARRPWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQADRIIR-AEAEAAKT 608
+PAGH+IG+ +PLF++L++D++E R +F G QA + A E T
Sbjct: 787 C----------TLPAGHQIGTVSPLFQKLENDQIESLRQRFGGGQAKTSPKPAVVETVTT 836
Query: 609 A--EQLKKTKISVDGGGKKQKSAKSTAGAKSKTTAE 642
A +Q++ V G + K+ K++ AE
Sbjct: 837 AKPQQIQALMDEVTKQGNIVRELKAQKADKNEVAAE 872
>sp|Q6PF21|SYMC_XENLA Methionine--tRNA ligase, cytoplasmic OS=Xenopus laevis GN=mars PE=2
SV=1
Length = 905
Score = 670 bits (1729), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/613 (51%), Positives = 432/613 (70%), Gaps = 27/613 (4%)
Query: 2 GSTGEENPAA-PPPKLPIPGKRNILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRG 60
G TG P P P LP+ G++N+LITSALPYVNNVPHLGNIIGSVLSADVFAR+CRLR
Sbjct: 241 GLTGASKPKQRPHPILPVEGEKNVLITSALPYVNNVPHLGNIIGSVLSADVFARYCRLRN 300
Query: 61 YNAIYICGTDEYGTATETKAMEDNCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQ 120
+N +YICGTDEYGTATETKAME+ +P++ICDKY+ IH +Y+WF+ISFD FGRT+T Q
Sbjct: 301 WNTLYICGTDEYGTATETKAMEEGLTPQQICDKYNAIHTAIYQWFNISFDYFGRTTTQHQ 360
Query: 121 TEACQAIFKKLLDNNWLIENTMQQPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCEN 180
T Q IF +LL+ +L+ +T++Q C+ C+RFLADR VEG CPF CNYE ARGDQC+
Sbjct: 361 TTISQDIFHRLLEREFLLTDTVEQLRCEKCQRFLADRFVEGICPF--CNYEEARGDQCDK 418
Query: 181 CGKLLNATDLKDPKCKVCRNAPQIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQ 240
CGKL+NA +LK P+CK+C+ +P I+ + HLFLDLP L +LE+++ G W+ NA
Sbjct: 419 CGKLINAVELKKPQCKICKQSPVIKSSKHLFLDLPKLEKRLEQWLEQSFSTGDWTSNARF 478
Query: 241 ATHAWLKEGLKVRCITRDLKWGVPVPLERFKEKVFYVWFDAPIGYVSITSCYTNEWEQWW 300
T +W+++GLK RCITRDLKWG PVPL+ F++KVFYVWFDAPIGY+SIT+ YT++WE+WW
Sbjct: 479 ITRSWIRDGLKPRCITRDLKWGTPVPLDGFRDKVFYVWFDAPIGYISITANYTDQWEKWW 538
Query: 301 KNPENVELYQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGI 360
K+P+ V+LY FM KDNVPFH+V+FPS LLG +N+TL+ + TEYLNYE GKFSKS+G+
Sbjct: 539 KSPQQVQLYNFMAKDNVPFHSVVFPSCLLGAEDNYTLVNHLVATEYLNYEDGKFSKSRGV 598
Query: 361 GVFGNDAKDTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSF 420
GVFG+ AKDT IP ++WR+YLL RPE D+ F+W+DL K+N+ELLNNLGNF+NR F
Sbjct: 599 GVFGDMAKDTGIPADIWRFYLLYVRPEGQDSAFSWSDLMLKNNSELLNNLGNFVNRAGMF 658
Query: 421 IAKPPGQGYGSIVPDANGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISS 480
+ K + VP+ E K L +V ++QY +EKV+++ L+ ++IS
Sbjct: 659 VQK----FFNGCVPE---MELLSEDKRLLAQVAAELQQYNLLLEKVRIRDALRCILNISR 711
Query: 481 EGNAYLQESQFWKLYK---EDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNL 537
GN Y+Q ++ WK K ++Q V +V + LL+ +L P+MP+ S + +QL +
Sbjct: 712 HGNQYIQVNEPWKCIKGNQQEQKRAGTVTGVAVNMAALLSIMLHPYMPTISSVIQEQLLM 771
Query: 538 QPEKHISLCDEKGDVDRARRPWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQADR 597
E + D + +GH+IG+ +PLF++L++D++E R +F G Q
Sbjct: 772 PQESKVLTTDFCC----------CLQSGHQIGNVSPLFQKLENDQIESLRKRFGGGQ--- 818
Query: 598 IIRAEAEAAKTAE 610
++ E++ + + E
Sbjct: 819 -VKTESKVSPSQE 830
>sp|Q9UUF2|SYMC_SCHPO Probable methionine--tRNA ligase, cytoplasmic
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=rar1 PE=3 SV=1
Length = 782
Score = 647 bits (1670), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/586 (53%), Positives = 406/586 (69%), Gaps = 24/586 (4%)
Query: 16 LPIPGKRNILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTA 75
LP +RNILITSALPYVNNVPHLGNI+GS LSADVFAR+ R R +N +YICGTDEYGTA
Sbjct: 216 LPKSNERNILITSALPYVNNVPHLGNIVGSTLSADVFARYHRARNHNTLYICGTDEYGTA 275
Query: 76 TETKAMEDNCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNN 135
TETKA+E+ SPKE+CDKYH +HK+VY WF+I FD+FGRT+TP+QT Q IF KL +N+
Sbjct: 276 TETKALEEGVSPKELCDKYHALHKEVYDWFEIDFDHFGRTTTPKQTGIAQHIFTKLYNND 335
Query: 136 WLIENTMQQPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKC 195
++ +TM Q YC+ + +LADR VEGTCP C Y+ ARGDQC+ CG LLNA +L DPKC
Sbjct: 336 YMAIDTMTQLYCEVHQGYLADRYVEGTCP--KCGYDDARGDQCDGCGGLLNAFELIDPKC 393
Query: 196 KVCRNAPQIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCI 255
K+ R P R+T H+FL L L+ +E + +V G WS N T +WLKEGL+ RCI
Sbjct: 394 KLDRATPVKRETKHVFLSLDKLQPAVESWAMQSAVEGKWSNNGRSITESWLKEGLRPRCI 453
Query: 256 TRDLKWGVPVPLERFKEKVFYVWFDAPIGYVSITSCYTNEWEQWWKNPENVELYQFMGKD 315
TRDLKWG PVPLE FK KV YVWFDA IGY+SIT+ YT+EWE+WW+NPE V+LYQFMGKD
Sbjct: 454 TRDLKWGTPVPLEEFKGKVLYVWFDATIGYISITANYTDEWEKWWRNPEQVKLYQFMGKD 513
Query: 316 NVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDTNIPVE 375
NVPFHTV+FPS+LLGTGE WT++ I+ T+YLNYE+GKFSKS+G+GVFGN A+D +
Sbjct: 514 NVPFHTVIFPSSLLGTGEKWTMLHHINTTDYLNYETGKFSKSRGVGVFGNTAQDIGLSPS 573
Query: 376 VWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIVPD 435
VWRYYLL++RPE SDT+FTW + + N+ELL NLGNF+NR L F Y +VP
Sbjct: 574 VWRYYLLSSRPETSDTMFTWKEFITRHNSELLANLGNFVNRTLKFTTAK----YNGLVPH 629
Query: 436 A---NGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQF- 491
+ +L + V + +Y A+E KL++GL+ AM IS+ GN YLQ+++
Sbjct: 630 YLTDPSVGAGKLKADFVKDVNALLAKYNAALEASKLREGLRLAMEISARGNQYLQDNRID 689
Query: 492 WKLYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCDEKGD 551
K Y ++ C+ + ++ L++LLA + P+MPS S + KQLN P I
Sbjct: 690 NKCYLYERQKCADAIGYALNLIYLLAAIFYPYMPSTSTSIYKQLN-APAAAIP------- 741
Query: 552 VDRARRPWEI-IPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQAD 596
WE+ + GH+IG P LF + + E +RSK+ G+ ++
Sbjct: 742 -----DTWELCLLPGHRIGEPEYLFTRIDESMEEEWRSKYGGNGSN 782
>sp|Q73NT9|SYM_TREDE Methionine--tRNA ligase OS=Treponema denticola (strain ATCC 35405 /
CIP 103919 / DSM 14222) GN=metG PE=3 SV=1
Length = 793
Score = 644 bits (1662), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/746 (43%), Positives = 477/746 (63%), Gaps = 57/746 (7%)
Query: 25 LITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMEDN 84
L+TSALPYVNN PHLGN+I VLSADVFARFCRL+ Y +YICGTDEYGTATETKA+E+
Sbjct: 5 LVTSALPYVNNFPHLGNLI-QVLSADVFARFCRLKEYETLYICGTDEYGTATETKALEEK 63
Query: 85 CSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQQ 144
SP+E+C YH IH ++Y WF+I+FD FGRTSTPQQTE Q IF L N ++ E+T++Q
Sbjct: 64 KSPEELCSFYHAIHAEIYNWFNIAFDYFGRTSTPQQTEITQGIFNDLDKNGYITEHTIEQ 123
Query: 145 PYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAPQI 204
YC +CKRFLADR V GTCP C+Y+ ARGDQCE+CGKLL+ TDLK+P+C C AP++
Sbjct: 124 LYCPSCKRFLADRYVLGTCP--SCSYDGARGDQCEHCGKLLDPTDLKEPRCSSCGAAPEV 181
Query: 205 RDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLKWGVP 264
R T HL+++LP + + E+++ + G WS NA+Q + +WL++GL+ R ITRDLKWG+P
Sbjct: 182 RSTTHLYINLPKIVPEYEKWMPKTAEEGRWSNNALQMSKSWLRDGLQERAITRDLKWGIP 241
Query: 265 VPLERFKEKVFYVWFDAPIGYVSITSCYTN----EWEQWWKNPENVELYQFMGKDNVPFH 320
VP + F++KVFYVWFDAPIGY+SIT C+ + +W+ WW + +VEL+QF+GKDN+PFH
Sbjct: 242 VPKKGFEDKVFYVWFDAPIGYISITKCWADLAGKDWKAWWLDQNDVELFQFIGKDNIPFH 301
Query: 321 TVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDTNIPVEVWRYY 380
TV+FP +L+G+G+NWT + +S TEYLNYE+GKFSKSKG+GVFGNDAK++ IP ++WR+Y
Sbjct: 302 TVIFPCSLIGSGKNWTKLFHMSGTEYLNYENGKFSKSKGVGVFGNDAKESGIPADMWRFY 361
Query: 381 LLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIVPDANGAE 440
+ NRPE +DT FTW D Q + N+EL+ NL N +NR +FI + Y +P +GA+
Sbjct: 362 IFYNRPEKNDTQFTWKDFQERVNSELIGNLCNLVNRTATFIHR----YYDGKIPQVDGAK 417
Query: 441 SHQ-----LTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLY 495
S + + K+L E ++ E + +L+ A ++SS N Q+ + WK
Sbjct: 418 SGREDIKSMVKSLREAASASFKKITELSDWAELRDSFHEAFALSSVANKAFQDGEPWKRR 477
Query: 496 KEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCDEKGDVDRA 555
+ D +M L+ + L+ P+MP ++ ++ +K S G +
Sbjct: 478 ETDPEYAEALMSELCYLIKDILILIHPYMPQYA---DQAAGFFGQKIWSGNIFDGKAPQF 534
Query: 556 RRPWEIIPAGHKIG---------SPNPLFKELKDDEVEFFRSKFAGSQADRIIRAEAEAA 606
+P + +G +P +FK L + ++ +R +++GSQ DR
Sbjct: 535 NKPEGSFLSWKNLGEREGLKTVENPVIIFKTLDNKVIDAYRERYSGSQKDR--------- 585
Query: 607 KTAEQLKKTKISVDGGGKKQKSAKSTAGAKSKTTAEPEISIA-------RLDIRVGKITK 659
K +E+ G K + S+ + ++A+PE+ ++ ++ ++ KI
Sbjct: 586 KKSEK----------GCSACKDSGSSKSDAAASSAKPEVKLSPAELFSKKIALKTAKIIS 635
Query: 660 VQKHPDADALYVEEIDVGEVQPRTVVSGLVKHIPLEEMQERMVCVLCNLKPVAMRGIKSH 719
V++HPDAD LY+E++D G + RT++SGLV + +E+ + V + NLKP MRGI+S
Sbjct: 636 VERHPDADKLYIEKLDDGSGEERTILSGLVPFLKEDEILGKTVIIADNLKPRKMRGIESK 695
Query: 720 AMVLCASTSDNTK---VELVEPPKSA 742
M+L AS D + VEL++ P +A
Sbjct: 696 GMLLAASWYDEEEKEHVELLQAPWAA 721
>sp|Q20970|SYMC_CAEEL Methionine--tRNA ligase, cytoplasmic OS=Caenorhabditis elegans
GN=mrs-1 PE=2 SV=1
Length = 917
Score = 624 bits (1608), Expect = e-177, Method: Compositional matrix adjust.
Identities = 311/635 (48%), Positives = 411/635 (64%), Gaps = 42/635 (6%)
Query: 12 PPPKLPIPGKRNILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDE 71
P LP PGKRNILIT+ALPYVNNVPHLGNIIG VLSADVFAR+C LRG+ Y+ GTDE
Sbjct: 25 PKSILPQPGKRNILITAALPYVNNVPHLGNIIGCVLSADVFARYCNLRGHQTFYVGGTDE 84
Query: 72 YGTATETKAMEDNCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKL 131
YGTATETKA+++ C+P+E+CDKYH IHK +Y+WF I F +FGRT+T QTE CQ +F KL
Sbjct: 85 YGTATETKALQEGCTPRELCDKYHAIHKGIYEWFGIDFSHFGRTTTDHQTEICQDMFLKL 144
Query: 132 LDNNWLIENTMQQPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLK 191
N + ++ Q YC+ C++FLADR V GTCP C Y+ ARGDQC+ CGKL+NA DLK
Sbjct: 145 HKNGYTSSQSVDQLYCNQCEKFLADRFVTGTCPM--CAYDDARGDQCDGCGKLINAVDLK 202
Query: 192 DPKCKVCRNAPQIRDTNHLFLDLPALRNKLEEYINNMSVA--GSWSQNAIQATHAWLKEG 249
D KC +C+ P+++ + H+FL L L+ K E+++ WS NA+ T AW+K G
Sbjct: 203 DAKCHMCKATPEVKQSTHIFLSLDKLQQKTTEHLDRELAKEDNRWSSNAVGITKAWMKLG 262
Query: 250 LKVRCITRDLKWGVPVPLERFKEKVFYVWFDAPIGYVSITSCYTNE-WEQWWKNPENVEL 308
L RCITRDLKWG VPL+ F++KVFYVWFDAPIGY+SIT C + W +WWKNPENVEL
Sbjct: 263 LDPRCITRDLKWGTAVPLDGFEKKVFYVWFDAPIGYLSITKCVLGDNWTKWWKNPENVEL 322
Query: 309 YQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAK 368
+ F+GKDNV FH VMFP + LG +N+T++ + TEYLNYE KFSKS+G G+FG+ A+
Sbjct: 323 FNFVGKDNVAFHAVMFPCSQLGANDNYTVVNNLCATEYLNYEDTKFSKSRGTGIFGDAAQ 382
Query: 369 DTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQG 428
T IP ++WR+YLL RPE DT F+W D K N+ELLNNLGNFINR LSF+A
Sbjct: 383 GTEIPADIWRFYLLYMRPESQDTAFSWDDFVLKVNSELLNNLGNFINRALSFVA----NS 438
Query: 429 YGSIVPDANGAESHQLTKTLAE---KVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAY 485
+G +VP+ N LT AE ++ Q+ + + V LK +KT +++S GN Y
Sbjct: 439 FGGVVPEMN------LTNDDAEVLSEIHNECMQWDKQFDGVHLKDAVKTILNVSRLGNQY 492
Query: 486 LQESQFWKLYKEDQPS---CSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKH 542
+Q W L K+D+ ++ + + + ++ LL P MP+ S + +Q L
Sbjct: 493 MQAQTPWVLMKKDEEGKKRAGTIIGVAANIAYHVSVLLYPIMPTISATIREQCGLPALPL 552
Query: 543 ISLCDEKGDVDRARRPWEI--IPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQADRIIR 600
+ P+ I + AGHKIG P+PLF++L ++ F++KF GSQ
Sbjct: 553 FT-------------PFPICYLKAGHKIGQPSPLFQKLDPAQIAEFKAKFGGSQ-----D 594
Query: 601 AEAEAAKTAEQLKKTKISVDGGGKK-QKSAKSTAG 634
A++ A KTAE+ K+ K KK K STA
Sbjct: 595 AQSSAPKTAEKPKQQKKQAPTKDKKGDKKMASTAA 629
Score = 177 bits (449), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 86/146 (58%), Positives = 108/146 (73%), Gaps = 2/146 (1%)
Query: 645 ISIARLDIRVGKITKVQKHPDADALYVEEIDVGEVQPRTVVSGLVKHIPLEEMQERMVCV 704
I + RLD+RVG+I K +KHPDADALYVE+IDVGE PRTVVSGLV+H+PL++MQ R+V V
Sbjct: 755 IDVGRLDMRVGRIIKCEKHPDADALYVEQIDVGESAPRTVVSGLVRHVPLDQMQNRLVVV 814
Query: 705 LCNLKPVAMRGIKSHAMVLCASTSDNTKVELVEPPKSAKIGERVAFPGFEGEPDDVLNPK 764
LCNLKP MRG++S AMV+CAS+ D KVE++E P +K G V P + PD+ LNPK
Sbjct: 815 LCNLKPAKMRGVESRAMVMCASSPD--KVEIMEVPADSKPGTPVVCPPYTHRPDEQLNPK 872
Query: 765 KKVWETVQVDLHTNTELVACYKDIPF 790
KK+WETV DL + E A +K P
Sbjct: 873 KKIWETVAEDLKVSAEGFAEWKGQPL 898
>sp|P00958|SYMC_YEAST Methionine--tRNA ligase, cytoplasmic OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=MES1 PE=1 SV=4
Length = 751
Score = 615 bits (1585), Expect = e-175, Method: Compositional matrix adjust.
Identities = 290/581 (49%), Positives = 402/581 (69%), Gaps = 20/581 (3%)
Query: 16 LPIPGKRNILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTA 75
LP P +RNILITSALPYVNNVPHLGNIIGSVLSAD+FAR+C+ R YNA++ICGTDEYGTA
Sbjct: 190 LPKPNERNILITSALPYVNNVPHLGNIIGSVLSADIFARYCKGRNYNALFICGTDEYGTA 249
Query: 76 TETKAMEDNCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNN 135
TETKA+E+ +P+++CDKYH IH DVYKWF I FD FGRT+T +QTE Q IF KL N
Sbjct: 250 TETKALEEGVTPRQLCDKYHKIHSDVYKWFQIGFDYFGRTTTDKQTEIAQHIFTKLNSNG 309
Query: 136 WLIENTMQQPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKC 195
+L E +M+Q YC +LADR VEG CP C+Y+ ARGDQC+ CG LL+ +L +P+C
Sbjct: 310 YLEEQSMKQLYCPVHNSYLADRYVEGECP--KCHYDDARGDQCDKCGALLDPFELINPRC 367
Query: 196 KVCRNAPQIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCI 255
K+ +P+ + ++H+FL L L +++ E++ S G+WS+N+ T +WLK+GLK RCI
Sbjct: 368 KLDDASPEPKYSDHIFLSLDKLESQISEWVEKASEEGNWSKNSKTITQSWLKDGLKPRCI 427
Query: 256 TRDLKWGVPVPLERFKEKVFYVWFDAPIGYVSITSCYTNEWEQWWKNPENVELYQFMGKD 315
TRDL WG PVPLE++K+KV YVWFDA IGYVSITS YT EW+QWW NPE+V LYQFMGKD
Sbjct: 428 TRDLVWGTPVPLEKYKDKVLYVWFDATIGYVSITSNYTKEWKQWWNNPEHVSLYQFMGKD 487
Query: 316 NVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDTNIPVE 375
NVPFHTV+FP + LGT ENWT++ ++ TEYL YE+GKFSKS+G+GVFGN+A+D+ I
Sbjct: 488 NVPFHTVVFPGSQLGTEENWTMLHHLNTTEYLQYENGKFSKSRGVGVFGNNAQDSGISPS 547
Query: 376 VWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIVPD 435
VWRYYL + RPE SD+ F+W D A++N+ELL NLGNF+NR++ F+ Y +VP
Sbjct: 548 VWRYYLASVRPESSDSHFSWDDFVARNNSELLANLGNFVNRLIKFV----NAKYNGVVPK 603
Query: 436 ANGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWK-L 494
+ + L + + + + Y++ ME ++GL+ AMS+S+ GN +LQE++ L
Sbjct: 604 FDPKKVSNY-DGLVKDINEILSNYVKEMELGHERRGLEIAMSLSARGNQFLQENKLDNTL 662
Query: 495 YKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCDEKGDVDR 554
+ + V+ + +++ ++ ++ P+MP ++NK LN K D++ +
Sbjct: 663 FSQSPEKSDAVVAVGLNIIYAVSSIITPYMPEIGEKINKMLNAPALK----IDDRFHL-- 716
Query: 555 ARRPWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQA 595
I GH I LF+ + + +++ +R+K+ G Q
Sbjct: 717 ------AILEGHNINKAEYLFQRIDEKKIDEWRAKYGGQQV 751
>sp|O83776|SYM_TREPA Methionine--tRNA ligase OS=Treponema pallidum (strain Nichols)
GN=metG PE=3 SV=1
Length = 811
Score = 608 bits (1569), Expect = e-173, Method: Compositional matrix adjust.
Identities = 312/766 (40%), Positives = 458/766 (59%), Gaps = 56/766 (7%)
Query: 25 LITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMEDN 84
LIT+ALPYVNNVPHLGN+I LSADVFARFCR+RGY+ ++CGTDEYGTA+ET+A E
Sbjct: 5 LITAALPYVNNVPHLGNLIQG-LSADVFARFCRMRGYHTCFVCGTDEYGTASETRAAEQG 63
Query: 85 CSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQQ 144
SP ++C YH +H+D+Y+WFD+SFD FGRT++ TE QA+F+ L ++ E+ Q
Sbjct: 64 LSPAQLCAHYHALHRDIYQWFDLSFDYFGRTTSDAHTELTQALFRHLDARGFISEHESAQ 123
Query: 145 PYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAPQI 204
YC C RFLADR + GTCP C AR DQCE+CG LL L + +C C AP+
Sbjct: 124 AYCLHCARFLADRYLRGTCPH--CRNAEARADQCEHCGVLLEPETLLNARCVSCGTAPEF 181
Query: 205 RDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLKWGVP 264
R T HL+L+LPAL + + W++NA++ T WL+ GL+ R ITRDL+WGVP
Sbjct: 182 RPTRHLYLNLPALEKAYRSWF--CTTNHLWTKNAVRMTEGWLRTGLQERAITRDLRWGVP 239
Query: 265 VPLERFKEKVFYVWFDAPIGYVSITSCYTN----------------EWEQWWKNPENVEL 308
VP F++KVFYVWFDAP+GY+SIT C T +W+ WW + ++VEL
Sbjct: 240 VPKAGFEQKVFYVWFDAPVGYISITKCGTEAASSQEGGGTDDGVKEKWQSWWLDQQDVEL 299
Query: 309 YQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAK 368
QF+GKDN+PFHT+ FP L+G+G+ WT++ +S TEYLNYE GKFSKS G+GVFG+DAK
Sbjct: 300 VQFVGKDNIPFHTLFFPCMLIGSGQRWTMLTRLSATEYLNYEGGKFSKSLGVGVFGSDAK 359
Query: 369 DTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQG 428
++ IP ++WR+YLL +RPE SD FTW + Q + N+EL+ NL N +NR L+F+A+
Sbjct: 360 ESGIPSDLWRFYLLYHRPEKSDAHFTWHEFQERVNSELIGNLCNLVNRTLTFVART---- 415
Query: 429 YGSIVPDANGAESHQL-----TKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGN 483
YG +VP +GA S + T L E V ++ + ME+V+L++ + ++S+ N
Sbjct: 416 YGGVVPAQDGARSTRAQVMEETLALREAVRNTAKRMTDLMEQVQLREAFREVFALSARAN 475
Query: 484 AYLQESQFWKLYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQ----- 538
LQ+ WK +D+ +MR ++ + L PF+P ++ + + L +Q
Sbjct: 476 KALQDGAPWKTRAQDRERADALMRELCYVIRDVLILAHPFLPWYTQQAARFLGVQLSSCA 535
Query: 539 PEKHISLCDEKGDVDRARRPWEIIP------AGHKIG-----SPNPLFKELKDDEVEFFR 587
PE ++C K D D A +P + P G + G P LF+ L+ + + +R
Sbjct: 536 PEGGGAVCAAKKDADTA-QPDTVQPTLRWSDVGERKGLTQVHPPVILFRPLETETIAAYR 594
Query: 588 SKFAGSQADRIIRAEAEAAKTAEQLKKTKISVDGGGKKQKSAKSTAGAKSKTTAEPEISI 647
+++AG+ D A +TA+ T ++ +QK + S T
Sbjct: 595 ARYAGTARD---GAGVSVPRTAQM--PTGMNKKETDAQQKKEEREMPPPSDTARLSAFFS 649
Query: 648 ARLDIRVGKITKVQKHPDADALYVEEIDVGEVQPRTVVSGLVKHIPLEEMQERMVCVLCN 707
R+ ++V ++ +V++HP+AD L+VE +D G R +VSGLV ++ + ++ V ++ N
Sbjct: 650 ERVVLKVARVLQVERHPNADMLFVETLDDGSGVERVIVSGLVPYMAADALRGAHVLIVDN 709
Query: 708 LKPVAMRGIKSHAMVLCASTSD---NTKVELVEPPKSAKIGERVAF 750
L+P ++RG++S M+L A D +ELV+ P A GER
Sbjct: 710 LQPRSLRGVRSCGMLLAAEYVDAQGTKAIELVQAP-WALPGERATL 754
>sp|Q44951|SYM_BORBU Methionine--tRNA ligase OS=Borrelia burgdorferi (strain ATCC 35210
/ B31 / CIP 102532 / DSM 4680) GN=metG PE=3 SV=2
Length = 734
Score = 555 bits (1431), Expect = e-157, Method: Compositional matrix adjust.
Identities = 291/727 (40%), Positives = 431/727 (59%), Gaps = 61/727 (8%)
Query: 25 LITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMEDN 84
L+T+ALPYVNN+PHLGN++ VLSAD FAR+ ++ G +Y+CGTDEYGTATETKA+ +N
Sbjct: 6 LVTAALPYVNNIPHLGNLV-QVLSADAFARYSKMSGIETLYVCGTDEYGTATETKALIEN 64
Query: 85 CSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQQ 144
+P E+C+KY+ IHK +YKWF+I FD FGRT+ + Q F +L N ++ E +Q
Sbjct: 65 TTPLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKNHQDIVQNFFLQLEKNGYIKERETEQ 124
Query: 145 PYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAPQI 204
YC+ FLADR V G CP C A+GDQC+NC KLLN TDL +PKC +C+N P +
Sbjct: 125 FYCNKDSMFLADRYVIGECP--ECQ-SMAKGDQCDNCSKLLNPTDLINPKCIICKNKPIL 181
Query: 205 RDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLKWGVP 264
+ TNHL+LDLP ++ KLE++I N + +W+ NA++ T A+L++GLK R ITRDLKWG+P
Sbjct: 182 KKTNHLYLDLPKIKTKLEKWIKNPDTSKNWNTNALKMTKAFLRDGLKERAITRDLKWGIP 241
Query: 265 VPLERFKEKVFYVWFDAPIGYVSITSCYTNEWEQWWKNPENVELYQFMGKDNVPFHTVMF 324
VP + F+ KVFYVWFDAPIGY+SIT WE WWKN + V L QF+GKDN+ FHT++F
Sbjct: 242 VPKKGFENKVFYVWFDAPIGYISITKNIIKNWESWWKNNDQVNLVQFIGKDNILFHTIIF 301
Query: 325 PSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDTNIPVEVWRYYLLTN 384
P +G+ ENWT++ +S +EYLNYE+ KFSKS+G G+FGNDA T IP ++WR+Y+ N
Sbjct: 302 PCIEIGSEENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDAITTGIPSDIWRFYIYYN 361
Query: 385 RPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIVPDANGAESHQL 444
RPE SD F W DL + N EL++N N +NRVL+F K +G ++ E+ ++
Sbjct: 362 RPEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQRK----FFGDVI------ETIEI 411
Query: 445 TKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLYKEDQPSCSI 504
+++ + L +K +LK LK + ISS GN Q+++ WK
Sbjct: 412 QNKFWKQITPKYNKILNLFKKTELKSALKEILKISSLGNKIFQDNEPWKRKNNSPQETKE 471
Query: 505 VMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCDEKGDVDRARRPWEIIPA 564
++ + L+ L+ L+ PF+P S ++ + + + K +
Sbjct: 472 LISNLIYLIRDLSILMMPFIPETSKKIQQFFGNSYQFSTKILGTKSGI------------ 519
Query: 565 GHKIGSPNPLFKELKDDEVEFFRSKFAGSQADRIIRAEAEAAKTAEQLKKTKISVDGGGK 624
KI LF +L+ ++ + K++G D K
Sbjct: 520 -KKIEFTEILFNKLEQKKINNLKLKYSG---------------------------DKNMK 551
Query: 625 KQKSAKSTAGAKSKTTAEPE-ISIARLDIRVGKITKVQKHPDADALYVEEIDVGEVQPRT 683
+ + A++ AK +PE + ++ +RV KI K++++P+A L++ ++D G + +
Sbjct: 552 ENEQAENLPIAKE----QPENLFREKVLLRVVKINKIERNPEAKNLFILKLDDGTNKDKQ 607
Query: 684 VVSGLVKHIPLEEMQERMVCVLCNLKPVAMRGIKSHAMVLCASTSD-NTKVELVEPPKSA 742
+VSGL + EE+ + + ++ NLKP RGIKS M++ A + N KV +VE
Sbjct: 608 IVSGLEGYYTEEELLGKHIIIVDNLKPAKFRGIKSEGMLIAAEDKNKNFKVIIVEDSIQN 667
Query: 743 KI-GERV 748
I GER+
Sbjct: 668 PIAGERI 674
>sp|B7J2F0|SYM_BORBZ Methionine--tRNA ligase OS=Borrelia burgdorferi (strain ZS7)
GN=metG PE=3 SV=1
Length = 734
Score = 554 bits (1428), Expect = e-156, Method: Compositional matrix adjust.
Identities = 290/727 (39%), Positives = 431/727 (59%), Gaps = 61/727 (8%)
Query: 25 LITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMEDN 84
L+T+ALPYVNN+PHLGN++ VLSAD FAR+ ++ G +Y+CGTDEYGTATETKA+ +N
Sbjct: 6 LVTAALPYVNNIPHLGNLV-QVLSADAFARYSKMSGIKTLYVCGTDEYGTATETKALIEN 64
Query: 85 CSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQQ 144
+P E+C+KY+ IHK +YKWF+I FD FGRT+ + Q F +L N ++ E +Q
Sbjct: 65 TTPLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKNHQDIVQNFFLQLEKNGYIKERETEQ 124
Query: 145 PYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAPQI 204
+C+ FLADR V G CP C A+GDQC+NC KLLN TDL +PKC +C+N P +
Sbjct: 125 FFCNKDSMFLADRYVIGECP--ECQ-SMAKGDQCDNCSKLLNPTDLINPKCIICKNKPIL 181
Query: 205 RDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLKWGVP 264
+ TNHL+LDLP ++ KLE++I N + +W+ NA++ T A+L++GLK R ITRDLKWG+P
Sbjct: 182 KKTNHLYLDLPKIKTKLEKWIKNPDTSKNWNTNALKMTKAFLRDGLKERAITRDLKWGIP 241
Query: 265 VPLERFKEKVFYVWFDAPIGYVSITSCYTNEWEQWWKNPENVELYQFMGKDNVPFHTVMF 324
VP + F+ KVFYVWFDAPIGY+SIT WE WWKN + V L QF+GKDN+ FHT++F
Sbjct: 242 VPKKGFENKVFYVWFDAPIGYISITKNIIKNWESWWKNNDQVNLVQFIGKDNILFHTIIF 301
Query: 325 PSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDTNIPVEVWRYYLLTN 384
P +G+ ENWT++ +S +EYLNYE+ KFSKS+G G+FGNDA T IP ++WR+Y+ N
Sbjct: 302 PCIEIGSEENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDAITTGIPSDIWRFYIYYN 361
Query: 385 RPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIVPDANGAESHQL 444
RPE SD F W DL + N EL++N N +NRVL+F K +G ++ E+ ++
Sbjct: 362 RPEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQRK----FFGDVI------ETIEI 411
Query: 445 TKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLYKEDQPSCSI 504
+++ + L +K +LK LK + ISS GN Q+++ WK
Sbjct: 412 QNKFWKQITPKYNKILNLFKKTELKSALKEILKISSLGNKIFQDNEPWKRKNNSPQETKE 471
Query: 505 VMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCDEKGDVDRARRPWEIIPA 564
++ + L+ L+ L+ PF+P S ++ + + + K +
Sbjct: 472 LISNLIYLIRDLSILMMPFIPETSKKIQQFFGNSYQFSTKILGTKSGI------------ 519
Query: 565 GHKIGSPNPLFKELKDDEVEFFRSKFAGSQADRIIRAEAEAAKTAEQLKKTKISVDGGGK 624
KI LF +L+ ++ + K++G D K
Sbjct: 520 -KKIEFTEILFNKLEQKKINNLKLKYSG---------------------------DKNMK 551
Query: 625 KQKSAKSTAGAKSKTTAEPE-ISIARLDIRVGKITKVQKHPDADALYVEEIDVGEVQPRT 683
+ + A++ AK +PE + ++ +RV KI K++++P+A L++ ++D G + +
Sbjct: 552 ENEQAENLPIAKE----QPENLFREKVLLRVVKINKIERNPEAKNLFILKLDDGTNKDKQ 607
Query: 684 VVSGLVKHIPLEEMQERMVCVLCNLKPVAMRGIKSHAMVLCASTSD-NTKVELVEPPKSA 742
+VSGL + EE+ + + ++ NLKP RGIKS M++ A + N KV +VE
Sbjct: 608 IVSGLEGYYTEEELLGKHIIIVDNLKPAKFRGIKSEGMLIAAEDKNKNFKVIIVEDSIQN 667
Query: 743 KI-GERV 748
I GER+
Sbjct: 668 PIAGERI 674
>sp|Q660T5|SYM_BORGA Methionine--tRNA ligase OS=Borrelia garinii (strain PBi) GN=metG
PE=3 SV=1
Length = 724
Score = 546 bits (1408), Expect = e-154, Method: Compositional matrix adjust.
Identities = 286/726 (39%), Positives = 423/726 (58%), Gaps = 69/726 (9%)
Query: 25 LITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMEDN 84
L+T+ALPYVNN+PHLGN++ VLSAD FAR+ ++ G +YICGTDEYGTATETKA+ +
Sbjct: 6 LVTAALPYVNNIPHLGNLV-QVLSADAFARYSKMSGIETLYICGTDEYGTATETKALIEK 64
Query: 85 CSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQQ 144
SP E+C+KY+ IHK +YKWF+I FD FGRT+ + Q F KL N ++ E +Q
Sbjct: 65 TSPLELCNKYYKIHKSIYKWFNIEFDIFGRTTNKHHQDIVQNFFLKLEKNGYIKERETEQ 124
Query: 145 PYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAPQI 204
+C+ FLADR V G CP C A+GDQCENC KLLN DL +PKC +C+N P +
Sbjct: 125 FFCNKDSIFLADRYVIGECP--ECQ-SIAKGDQCENCSKLLNPIDLINPKCIICKNKPVL 181
Query: 205 RDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLKWGVP 264
+ TNHL++DLP ++ KLE++I N + + +W+ NA++ T+A+L++GLK R ITRDLKWG+P
Sbjct: 182 KKTNHLYIDLPKIKRKLEKWIKNSTTSKNWNTNALKMTNAFLRDGLKERAITRDLKWGIP 241
Query: 265 VPLERFKEKVFYVWFDAPIGYVSITSCYTNEWEQWWKNPENVELYQFMGKDNVPFHTVMF 324
VP + ++ KVFYVWFDAPIGY+SIT WE WWKN E V L QF+GKDN+ FHTV+F
Sbjct: 242 VPKKGYENKVFYVWFDAPIGYISITKNLVKNWESWWKNNEQVNLVQFIGKDNILFHTVIF 301
Query: 325 PSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDTNIPVEVWRYYLLTN 384
PS +G+ ENWT++ +S +EYLNYE+ KFSKS+G G+FGND T IP +VWR+Y+ N
Sbjct: 302 PSIEIGSKENWTILNQLSSSEYLNYENLKFSKSEGTGIFGNDVITTGIPSDVWRFYIYYN 361
Query: 385 RPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIVPDANGAESHQL 444
RPE SD F W DL + N EL++N N +NRVL+F K +G ++ E+ ++
Sbjct: 362 RPEKSDFQFMWQDLMERVNTELIDNFSNLVNRVLTFQKK----FFGDVI------ETIEI 411
Query: 445 TKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLYKEDQPSCSI 504
+++ + L +K +LK LK + ISS GN Q+++ WK
Sbjct: 412 QNKFWKQIIPKYNKILNLFKKTELKSALKEILKISSLGNKIFQDNEPWKRKDSSPQETKE 471
Query: 505 VMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCDEKGDVDRARRPWEIIPA 564
++ + L+ L+ L+ PF+P S ++ + + + K + R
Sbjct: 472 LISNLIYLIRDLSILMMPFIPETSKKIQQFFGNSYQFSTKILGTKSGIKR---------- 521
Query: 565 GHKIGSPNPLFKELKDDEVEFFRSKFAGSQADRIIRAEAEAAKTAEQLKKTKISVDGGGK 624
I LF +L+ ++ + K++G + E + E L + K+
Sbjct: 522 ---IEFTEILFNKLEQKKINNLKLKYSGEK-------NMEEKEQPENLFREKVL------ 565
Query: 625 KQKSAKSTAGAKSKTTAEPEISIARLDIRVGKITKVQKHPDADALYVEEIDVGEVQPRTV 684
++V KI K++++P+A L++ ++D G + + +
Sbjct: 566 ---------------------------LKVVKINKIERNPEAKNLFILKLDDGTNENKQI 598
Query: 685 VSGLVKHIPLEEMQERMVCVLCNLKPVAMRGIKSHAMVLCASTSD-NTKVELVEPPKSAK 743
VS L + +E+ + + ++ NLKP RGIKS M++ A + N K+ +VE
Sbjct: 599 VSSLEGYYTEKELLGKHIIIVDNLKPAKFRGIKSEGMLIAAEDKNKNFKIIIVEDSIKNP 658
Query: 744 I-GERV 748
I GER+
Sbjct: 659 IPGERI 664
>sp|Q0SMS1|SYM_BORAP Methionine--tRNA ligase OS=Borrelia afzelii (strain PKo) GN=metG
PE=3 SV=1
Length = 724
Score = 545 bits (1405), Expect = e-154, Method: Compositional matrix adjust.
Identities = 287/726 (39%), Positives = 423/726 (58%), Gaps = 69/726 (9%)
Query: 25 LITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMEDN 84
LIT+ALPYVNN+PHLGN++ VLSAD FAR+ ++ G +YICGTDEYGTATETKA+ +
Sbjct: 6 LITAALPYVNNIPHLGNLV-QVLSADAFARYSKMSGIETLYICGTDEYGTATETKALIEK 64
Query: 85 CSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQQ 144
+P E+C+KY+ IHK +YKWF+I FD FGRT+ E Q F KL N ++ E +Q
Sbjct: 65 TTPLELCNKYYEIHKSIYKWFNIEFDIFGRTTNKHHQETVQNFFLKLEKNGYIKERETEQ 124
Query: 145 PYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAPQI 204
+C+ FLADR V G CP C A+GDQC+NC KLLN TDL +PKC +C+N P +
Sbjct: 125 FFCNKDLIFLADRYVIGECP--ECQ-SMAKGDQCDNCSKLLNPTDLINPKCIICKNKPIL 181
Query: 205 RDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLKWGVP 264
+ TNHL++DLP ++ KLE++I N + + +W+ NA++ T+A+L++GLK R ITRDLKWG+P
Sbjct: 182 KKTNHLYIDLPKIKTKLEKWIKNPTTSKNWNTNALKMTNAFLRDGLKERAITRDLKWGIP 241
Query: 265 VPLERFKEKVFYVWFDAPIGYVSITSCYTNEWEQWWKNPENVELYQFMGKDNVPFHTVMF 324
VP + ++ KVFYVWFDAPIGY+SIT WE WWKN + V L QF+GKDN+ FHT+MF
Sbjct: 242 VPKKGYENKVFYVWFDAPIGYISITKNIVKNWESWWKNNKQVNLVQFIGKDNILFHTIMF 301
Query: 325 PSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDTNIPVEVWRYYLLTN 384
P +G+ ENWT + +S +EYLNYE+ KFSKS+G G+FGND T IP +VWR+Y+ N
Sbjct: 302 PCIKIGSKENWTTLNQLSSSEYLNYENLKFSKSEGTGIFGNDVITTGIPSDVWRFYIYYN 361
Query: 385 RPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIVPDANGAESHQL 444
RPE SD F W DL + N EL++N N +NRVL+F K +G ++ E+ ++
Sbjct: 362 RPEKSDFQFIWQDLMERVNTELIDNFSNLVNRVLTFQKK----FFGDVI------ETIEI 411
Query: 445 TKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLYKEDQPSCSI 504
E++ + L + +LK LK + ISS GN Q+++ WK +
Sbjct: 412 QHKFWEQITPKYNKILNLFKNTELKSALKEILKISSFGNKIFQDNEPWKRKESSPQEIKE 471
Query: 505 VMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCDEKGDVDRARRPWEIIPA 564
++ + L+ L+ L+ PF+P S ++ + + + K +
Sbjct: 472 LILNLIYLIRDLSILMMPFIPETSKKIQQFFGNSYQFSTKILGTKSGI------------ 519
Query: 565 GHKIGSPNPLFKELKDDEVEFFRSKFAGSQADRIIRAEAEAAKTAEQLKKTKISVDGGGK 624
KI LF +L+ ++ R K++G + + + E L + K+
Sbjct: 520 -KKIEFVEILFNKLEQKKINDLRLKYSGEK-------NMKEKEQPENLFREKVL------ 565
Query: 625 KQKSAKSTAGAKSKTTAEPEISIARLDIRVGKITKVQKHPDADALYVEEIDVGEVQPRTV 684
+RV KI K++++P+A L++ ++D G + + +
Sbjct: 566 ---------------------------LRVVKINKIERNPEAKNLFILKLDDGTNKDKQI 598
Query: 685 VSGLVKHIPLEEMQERMVCVLCNLKPVAMRGIKSHAMVLCASTSD-NTKVELVEPP-KSA 742
VS L + EE+ + + ++ NLKP RGIKS M++ A + N K+ +VE K+
Sbjct: 599 VSSLEGYYTEEELLGKHIIIVDNLKPAKFRGIKSEGMLIAAEDKNKNFKIIIVEDSIKNP 658
Query: 743 KIGERV 748
GER+
Sbjct: 659 IAGERI 664
>sp|B5RPT6|SYM_BORRA Methionine--tRNA ligase OS=Borrelia recurrentis (strain A1) GN=metG
PE=3 SV=1
Length = 726
Score = 541 bits (1393), Expect = e-152, Method: Compositional matrix adjust.
Identities = 289/745 (38%), Positives = 422/745 (56%), Gaps = 89/745 (11%)
Query: 25 LITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMEDN 84
LIT+ALPYVNN+PHLGN++ VLSAD FAR+ R+ G +Y+CGTDEYGTATETKA+ +
Sbjct: 6 LITAALPYVNNIPHLGNLV-QVLSADAFARYSRMMGIETLYVCGTDEYGTATETKALIEK 64
Query: 85 CSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQQ 144
+P+E+C+KYH IHK +Y+WF+I FD FGRT+ E Q +F KL N ++ E +Q
Sbjct: 65 TTPEELCNKYHAIHKSIYEWFNIKFDIFGRTTNKYHKETVQDLFLKLDKNGYITEKENEQ 124
Query: 145 PYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAPQI 204
+C + FLADR V G CP G N +GDQCENC LL +L +P+C +C+N P I
Sbjct: 125 FFCQQDQMFLADRYVTGECPNCGNN---TKGDQCENCSNLLVTNELLNPRCIICKNIPII 181
Query: 205 RDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLKWGVP 264
+ T HL++DLP ++N+LE +I + +W+ NAI+ T+A+L++GLK R ITRDLKWG+P
Sbjct: 182 KKTKHLYIDLPKIKNELEHWIQQIDQNTNWNINAIKITNAFLRDGLKERTITRDLKWGIP 241
Query: 265 VPLERFKEKVFYVWFDAPIGYVSITSCYTNEWEQWWKNPENVELYQFMGKDNVPFHTVMF 324
VP + ++ KVFYVWFDAPIGY+SIT +WE WWKN E+ L QF+GKDN+ FHT+MF
Sbjct: 242 VPKKEYENKVFYVWFDAPIGYISITKEIIKDWESWWKNNEDTNLIQFIGKDNILFHTIMF 301
Query: 325 PSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDTNIPVEVWRYYLLTN 384
PS LG+ ENWT++ ++ +EYLNYE+ KFSKS G G+FGND T IP +VWR+Y+ N
Sbjct: 302 PSIELGSQENWTMLNKLASSEYLNYENLKFSKSAGTGIFGNDVITTEIPSDVWRFYIYYN 361
Query: 385 RPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIVPDANGAESHQL 444
RPE +D F W D + N+EL+ N N INRVL+F K G I +L
Sbjct: 362 RPEKADFQFMWDDFMERINSELIGNFSNLINRVLTFYKKFFGDKIDKI----------EL 411
Query: 445 TKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLYKEDQPSCSI 504
+ + V E+ + ++++LK LK + IS GN Q+ + WK +
Sbjct: 412 NENFWQIVNIKYERTINFFKQIELKAALKEILDISRIGNKIFQDKEPWKTKNSTPQTTKE 471
Query: 505 VMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCDEKGDVDRAR----RPWE 560
++ + L+ L+ L+ PFMP S DR R + +E
Sbjct: 472 LLLNLIYLIRDLSILISPFMPHTS------------------------DRIRSFFGKSYE 507
Query: 561 IIPA--GHKIG-----SPNPLFKELKDDEVEFFRSKFAGSQADRIIRAEAEAAKTAEQLK 613
I G +G S LF +L+ ++ + K++G +T Q +
Sbjct: 508 ISNKFLGTNLGLTTIQSTEVLFTKLEKQLIDSLKLKYSG--------------RTNMQDE 553
Query: 614 KTKISVDGGGKKQKSAKSTAGAKSKTTAEPEISIARLDIRVGKITKVQKHPDADALYVEE 673
K K S++ + ++ ++ KI + ++PDA+ L++ +
Sbjct: 554 KNKNSIN------------------------LFSEQICLKTVKIKTIDRNPDAEKLFILK 589
Query: 674 IDVGEVQPRTVVSGLVKHIPLEEMQERMVCVLCNLKPVAMRGIKSHAMVLCASTSD-NTK 732
+D G + + +VS + H EE+ + + ++ NLKP RGI+S M++ + N K
Sbjct: 590 LDDGTPEGKQIVSSIADHYTEEELIGKHIIIVDNLKPAKFRGIRSEGMLIATKDENKNFK 649
Query: 733 VELVEPPKSAKI-GERVAFPGFEGE 756
+ +VE K I GERV G+
Sbjct: 650 IIIVEDFKDNPIPGERVILESDTGK 674
>sp|B5RME0|SYM_BORDL Methionine--tRNA ligase OS=Borrelia duttonii (strain Ly) GN=metG
PE=3 SV=1
Length = 726
Score = 539 bits (1389), Expect = e-152, Method: Compositional matrix adjust.
Identities = 294/776 (37%), Positives = 435/776 (56%), Gaps = 96/776 (12%)
Query: 21 KRNILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKA 80
K+ LIT+ALPYVNN+PHLGN++ VLSAD FAR+ R+ G +Y+CGTDEYGTATETKA
Sbjct: 2 KKKNLITAALPYVNNIPHLGNLV-QVLSADAFARYSRMMGIETLYVCGTDEYGTATETKA 60
Query: 81 MEDNCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIEN 140
+ + +P+E+C+KYH IHK +Y+WF+I FD FGRT+ E Q +F KL N ++ E
Sbjct: 61 LIEKTTPEELCNKYHAIHKSIYEWFNIKFDIFGRTTNKYHKETVQDLFLKLDKNGYITEK 120
Query: 141 TMQQPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRN 200
+Q +C K FLADR V G CP G N +GDQCENC LL +L +P+C +C+N
Sbjct: 121 ENEQFFCQQDKMFLADRYVTGECPNCGNN---TKGDQCENCSNLLVTNELLNPRCIICKN 177
Query: 201 APQIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLK 260
P I+ T HL++DLP ++N+LE +I + +W+ NAI+ T+A+L++GLK R ITRDLK
Sbjct: 178 IPIIKKTKHLYIDLPKIKNELEHWIQQIDQNTNWNTNAIKITNAFLRDGLKERTITRDLK 237
Query: 261 WGVPVPLERFKEKVFYVWFDAPIGYVSITSCYTNEWEQWWKNPENVELYQFMGKDNVPFH 320
WG+PVP + ++ KVFYVWFDAPIGY+SIT +WE WWKN E+ L QF+GKDN+ FH
Sbjct: 238 WGIPVPKKEYENKVFYVWFDAPIGYISITKEIIKDWESWWKNNEDTNLIQFIGKDNILFH 297
Query: 321 TVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDTNIPVEVWRYY 380
T+MFPS LG+ ENWT++ ++ +EYLNYE+ KFSKS G G+FGND T IP +VWR+Y
Sbjct: 298 TIMFPSIELGSQENWTMLNKLASSEYLNYENLKFSKSAGTGIFGNDVITTGIPSDVWRFY 357
Query: 381 LLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIVPDANGAE 440
+ NRPE +D F W D + N+EL+ N N INRVL+F K G I
Sbjct: 358 IYYNRPEKADFQFMWDDFMERINSELIGNFSNLINRVLTFYKKFFGDKIDKI-------- 409
Query: 441 SHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLYKEDQP 500
+L + + V E+ + ++++LK LK + IS GN Q+ + WK
Sbjct: 410 --ELNENFWQIVNIKYERTINFFKQIELKAALKEILDISRIGNKIFQDKEPWKTKNSTPQ 467
Query: 501 SCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCDEKGDVDRAR---- 556
+ ++ + L+ L+ L+ PFMP S DR R
Sbjct: 468 TTKELLLNLIYLIRDLSILISPFMPHTS------------------------DRIRSFFG 503
Query: 557 RPWEIIPA--GHKIG-----SPNPLFKELKDDEVEFFRSKFAGSQADRIIRAEAEAAKTA 609
+ +EI G +G S LF +++ ++ + K++G +T
Sbjct: 504 KSYEISNKFLGTNLGLTTIQSTEVLFTKIEKQLIDSLKLKYSG--------------RTN 549
Query: 610 EQLKKTKISVDGGGKKQKSAKSTAGAKSKTTAEPEISIARLDIRVGKITKVQKHPDADAL 669
Q ++ K S++ +I + + I+ + ++PDA+ L
Sbjct: 550 MQDEQNKNSIN-------------------LFSEQICLKTVKIKT-----IDRNPDAEKL 585
Query: 670 YVEEIDVGEVQPRTVVSGLVKHIPLEEMQERMVCVLCNLKPVAMRGIKSHAMVLCASTSD 729
++ ++D G + + +VS + H EE+ + + ++ NLKP RGI+S M++ +
Sbjct: 586 FILKLDDGTPEGKQIVSSIADHYTEEELIGKHIIIVDNLKPAKFRGIRSEGMLIATEDEN 645
Query: 730 -NTKVELVEPPKSAKI-GERVAFPGFEGEPDDVLNPKKKVWETVQVDLHTNTELVA 783
N K+ +VE K I GERV G+ ++ +P K + +D ++VA
Sbjct: 646 KNFKIIIVEDFKDNPIPGERVILESDTGK--ELKSPTK-----INIDKFLQAQIVA 694
>sp|A1R019|SYM_BORT9 Methionine--tRNA ligase OS=Borrelia turicatae (strain 91E135)
GN=metG PE=3 SV=1
Length = 726
Score = 525 bits (1353), Expect = e-148, Method: Compositional matrix adjust.
Identities = 284/766 (37%), Positives = 430/766 (56%), Gaps = 76/766 (9%)
Query: 21 KRNILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKA 80
K+ LIT+ALPYVNN+PHLGN++ VLSAD FAR+ R+ + +Y+CGTDEYGTATETKA
Sbjct: 2 KKKNLITAALPYVNNIPHLGNLV-QVLSADAFARYSRMMDIDTLYVCGTDEYGTATETKA 60
Query: 81 MEDNCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIEN 140
+ + +P+E+C++Y+ IHK +Y+WF+I FD FGRT+ + Q +F KL N ++ +
Sbjct: 61 LIEKTTPEELCNRYYAIHKSIYEWFNIKFDIFGRTTNKSHKQTVQDLFLKLEKNGYITDK 120
Query: 141 TMQQPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRN 200
+Q +C + FLADR V G CP G N A+GDQCENC KLL DL +PKC +C+N
Sbjct: 121 ESEQFFCQQDQMFLADRYVTGECPNCGNN---AKGDQCENCSKLLAPIDLINPKCIICKN 177
Query: 201 APQIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLK 260
P I+ T HL+++LP ++N+L ++ +W+ NAI+ T+A+L++GLK R ITRDLK
Sbjct: 178 IPIIKTTKHLYINLPKIKNELIHWMQTTEHNTNWNTNAIKTTNAFLRDGLKERAITRDLK 237
Query: 261 WGVPVPLERFKEKVFYVWFDAPIGYVSITSCYTNEWEQWWKNPENVELYQFMGKDNVPFH 320
WG+PVP + ++ KVFYVWFDAPIGY+SIT + +WE WWKN + L QF+GKDN+ FH
Sbjct: 238 WGIPVPKKEYENKVFYVWFDAPIGYISITKEISKDWESWWKNNKETNLVQFIGKDNILFH 297
Query: 321 TVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDTNIPVEVWRYY 380
TV+FP+ LG+ ENWT++ ++ +EYLNYE KFSKS GIG+FGND T I ++WR+Y
Sbjct: 298 TVIFPAIKLGSKENWTMLGKLASSEYLNYEHLKFSKSAGIGIFGNDVITTGISADIWRFY 357
Query: 381 LLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIVPDANGAE 440
+ NRPE SD F W D + N+EL+ N N +NRVL+F K G +I
Sbjct: 358 IYYNRPEKSDFQFMWDDFMERINSELIGNFSNLVNRVLTFYKKFFGDKIDTI-------- 409
Query: 441 SHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLYKEDQP 500
++ + +++ ++ L ++++LK LK + IS GN Q+ + WK
Sbjct: 410 --EIKEDFWKEINLKYDKTLNFFKQIELKSALKEILDISRIGNKIFQDKEPWKTKDSTPK 467
Query: 501 SCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCDEKGDVDRARRPW- 559
++ + L+ L+ L+ PF+P S D+ RR +
Sbjct: 468 KTKELLLNLIYLIRDLSILISPFIPHTS------------------------DKIRRFFG 503
Query: 560 EIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQADRIIRAEAEAAKTAEQLKKTKISV 619
E +K N ++ EV F + + E + K+
Sbjct: 504 ESYEISNKFLGTNLGLNTIQFTEVLFTKLE-------------------KELIDSLKLKY 544
Query: 620 DGGGKKQKSAKSTAGAKSKTTAEPEISIARLDIRVGKITKVQKHPDADALYVEEIDVGEV 679
GG Q +T + ++ ++V +I ++++PDA+ L++ ++D G
Sbjct: 545 SGGKNMQ---------DEQTENPINLFSEKVCLKVVQIKTIERNPDAEKLFILKLDDGTP 595
Query: 680 QPRTVVSGLVKHIPLEEMQERMVCVLCNLKPVAMRGIKSHAMVLCASTSD-NTKVELVEP 738
+ +VS L + E++ + + ++ NLKP RGIKS M++ + N KV +VE
Sbjct: 596 DGKQIVSSLADYYKEEKLIGKHIIIVDNLKPAKFRGIKSEGMLIATEDENKNFKVIIVED 655
Query: 739 PKSAKI-GERVAFPGFEGEPDDVLNPKKKVWETVQVDLHTNTELVA 783
K I GER+ E + D K K+ + +D T++VA
Sbjct: 656 FKDNPIPGERII---LESDSD----KKLKLPSKISIDKFLKTQIVA 694
>sp|B2S0T6|SYM_BORHD Methionine--tRNA ligase OS=Borrelia hermsii (strain DAH) GN=metG
PE=3 SV=1
Length = 729
Score = 505 bits (1300), Expect = e-142, Method: Compositional matrix adjust.
Identities = 236/513 (46%), Positives = 336/513 (65%), Gaps = 14/513 (2%)
Query: 21 KRNILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKA 80
K+ LIT+ALPYVNN+PHLGN++ VLSAD FAR+ R+ G +Y+CGTDEYGTATETKA
Sbjct: 2 KKKNLITAALPYVNNIPHLGNLV-QVLSADAFARYSRMMGIETLYVCGTDEYGTATETKA 60
Query: 81 MEDNCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIEN 140
+ + +P+E+C+KY+ IHK +Y+WF+I FD FGRT+ + E Q +F KL N + E
Sbjct: 61 LIEKTTPEELCNKYYEIHKSIYEWFNIKFDIFGRTTNKRHKETVQDLFLKLEKNGYTTEK 120
Query: 141 TMQQPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRN 200
+Q +C + FLADR V G CP G N A+GDQCENC KLL+ TDL +PKC +C+N
Sbjct: 121 ESEQFFCKQDQMFLADRYVTGECPNCGNN---AKGDQCENCSKLLSPTDLINPKCIICKN 177
Query: 201 APQIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLK 260
P I+ T H+++DLP ++++L ++ + +W+ NAI+ T+A+L++GLK R ITRDLK
Sbjct: 178 IPIIKTTKHIYIDLPKIKDELSHWMQITELNTNWNTNAIKITNAFLRDGLKERAITRDLK 237
Query: 261 WGVPVPLERFKEKVFYVWFDAPIGYVSITSCYTNEWEQWWKNPENVELYQFMGKDNVPFH 320
WG+PVP + ++ KVFYVWFDAPIGY+SIT + +WE WWKN E L QF+GKDN+ FH
Sbjct: 238 WGIPVPKKEYENKVFYVWFDAPIGYISITKEISKDWESWWKNNEETNLVQFIGKDNILFH 297
Query: 321 TVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDTNIPVEVWRYY 380
TV+FPS LG+ ENWT++ ++ +EYLNYE+ KFSKS G G+FGND T IP ++WR+Y
Sbjct: 298 TVIFPSIALGSKENWTMLSKLASSEYLNYENLKFSKSAGTGIFGNDVITTGIPSDIWRFY 357
Query: 381 LLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIVPDANGAE 440
+ NRPE SD F W D + N+EL+ N N +NRVL+F K G I
Sbjct: 358 IYYNRPEKSDFQFMWDDFMERVNSELIGNFSNLVNRVLTFYKKFFGDQIDKI-------- 409
Query: 441 SHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLYKEDQP 500
++ + +++ ++ L ++V+LK LK + IS GN Q+ + WK
Sbjct: 410 --EIKEDFWQEINLKYDKTLNFFKQVELKSALKEILDISRTGNKIFQDKEPWKTKDSTPQ 467
Query: 501 SCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNK 533
++ + L+ L+ L+ PF+P S ++ +
Sbjct: 468 KTKELLLNLIYLIRDLSILISPFIPHTSDKIRR 500
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 58/99 (58%), Gaps = 2/99 (2%)
Query: 652 IRVGKITKVQKHPDADALYVEEIDVGEVQPRTVVSGLVKHIPLEEMQERMVCVLCNLKPV 711
++V ++ ++++PDA+ L++ +++ G + +VS L + EE+ + + ++ NLKP
Sbjct: 571 LKVVQVKTIERNPDAEKLFILKLNDGSSDGKQIVSSLADYYKEEELIGKHIIIVDNLKPA 630
Query: 712 AMRGIKSHAMVLCASTSD-NTKVELVEPPKSAKI-GERV 748
RGIKS M++ D N KV +VE K I GER+
Sbjct: 631 KFRGIKSEGMLIATEDKDKNFKVIIVEDFKDNPIPGERI 669
>sp|Q8U221|SYM_PYRFU Methionine--tRNA ligase OS=Pyrococcus furiosus (strain ATCC 43587 /
DSM 3638 / JCM 8422 / Vc1) GN=metG PE=3 SV=1
Length = 724
Score = 480 bits (1236), Expect = e-134, Method: Compositional matrix adjust.
Identities = 269/751 (35%), Positives = 405/751 (53%), Gaps = 59/751 (7%)
Query: 25 LITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMEDN 84
++T+ALPY N H G++ G+ L AD+F R+ RL+G + ++ICGTDE+GT +A+ +
Sbjct: 5 MVTAALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEDVVFICGTDEHGTPISFRALNEK 64
Query: 85 CSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQQ 144
SP+EI D++H K ++ ISFD FGRT P Q F K L+N +L++ +Q
Sbjct: 65 RSPREIVDEFHEHIKTAFQRVKISFDYFGRTELPVHYRLSQEFFLKALENGYLVKKVTKQ 124
Query: 145 PYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAPQI 204
YC+ KRFL DR V GTCP+ C E+ RGDQCE CG+ L L +P+C C+N
Sbjct: 125 AYCEHDKRFLPDRFVIGTCPY--CGAENQRGDQCEVCGRPLTPEILIEPRCAFCKNPITF 182
Query: 205 RDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLKWGVP 264
R++ H ++ + KL+E+I W N W++EGL+ R ITRDL WG+P
Sbjct: 183 RESTHYYIKMQEFEEKLKEWIKE----KDWKPNVKNMVLGWIEEGLEERAITRDLDWGIP 238
Query: 265 VPL--ERFKEKVFYVWFDAPIGYVSITSCYT------NEWEQWWKNPE-NVELYQFMGKD 315
VPL E K KV YVWF+APIGY+S+T Y NEW+++W N + + F+GKD
Sbjct: 239 VPLDEEDMKNKVLYVWFEAPIGYISLTIEYFKRIGKPNEWKKYWLNLDGQTRVIHFIGKD 298
Query: 316 NVPFHTVMFPSTLLGTGE--------NWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDA 367
N+PFH + +P+ L+ G+ W L I EYL E KFS S+ ++ ++
Sbjct: 299 NIPFHAIFWPAFLMAYGKYKDEEVEAEWNLPYDIPANEYLTLEGKKFSTSRNWAIWIHEF 358
Query: 368 KDTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQ 427
D P + RYYL + PE D+ F++A+ + K N EL+N LGNF+ R L+F+ +
Sbjct: 359 LDV-FPADYLRYYLTSIMPETRDSDFSFAEFKTKINEELVNVLGNFVYRALTFV----NR 413
Query: 428 GYGSIVPDANGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQ 487
+ IVP+ E +L + E++ K E+ + + + + K LK M+++ GN Y
Sbjct: 414 YFDGIVPER--GELDELDRQALEEIEKTFEEVGKLIREYRFKDALKKVMNLAGFGNRYFD 471
Query: 488 ESQFWKLYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCD 547
+ WK KED+ + S+ +V L LLEPF+P S ++ LNL+ K +
Sbjct: 472 YKEPWKTIKEDKTRTGTTINISLQIVKALGILLEPFLPDASEKIWHFLNLEEVKTWRFTE 531
Query: 548 EKGDVDRARRPWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQADRIIRAEAEAAK 607
+PAGHK+ P LFK+ DD++ +F + G R E
Sbjct: 532 --------------LPAGHKVRKPEILFKKASDDQIIYFILNYMGRNNPDAARELLEKYY 577
Query: 608 TAEQLKKTKISVDGGGKKQKSAKST----------AGAKSKTTAEPEISIARLDIRVGKI 657
E ++K I G + K K + + E S ++D+R+GKI
Sbjct: 578 KLEDVEKVAIEKFGEEDGRFMLKKIFKEKYKGEKKGEQKMQYVSFEEFS--KIDLRIGKI 635
Query: 658 TKVQKHPDADALYVEEIDVGEVQPRTVVSGLVKHIPLEEMQERMVCVLCNLKPVAMRGIK 717
+VQ HP+AD LYV ++D+G + RT+V+GL K+ EE+ R V ++ NL+P +RG++
Sbjct: 636 VEVQDHPNADKLYVVKVDLGG-EIRTLVAGLKKYYKPEELLNRYVVIVANLEPKKLRGVE 694
Query: 718 SHAMVLCASTSDNTKVELVEPPKSAKIGERV 748
S M+L A D KV L+ P K K+G +V
Sbjct: 695 SQGMLLAA--DDGEKVALLMPDKEVKLGAKV 723
>sp|Q9V011|SYM_PYRAB Methionine--tRNA ligase OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=metG PE=1 SV=1
Length = 722
Score = 474 bits (1221), Expect = e-133, Method: Compositional matrix adjust.
Identities = 270/749 (36%), Positives = 410/749 (54%), Gaps = 57/749 (7%)
Query: 25 LITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMEDN 84
++TSALPY N H G++ G+ L AD+F R+ RL+G + ++ICGTDE+GT +A+++
Sbjct: 5 MVTSALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEDVVFICGTDEHGTPISFRALKEG 64
Query: 85 CSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQQ 144
SP+EI D++H K ++ ISFD FGRT P + Q F K +N L++ +Q
Sbjct: 65 RSPREIVDEFHEQIKITFQRAKISFDFFGRTELPIHYKLSQEFFLKAYENGHLVKKVTKQ 124
Query: 145 PYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAPQI 204
YC+ K FL DR V GTCP+ C E +GDQCE CG+ L L +P+C +C
Sbjct: 125 AYCEHDKMFLPDRFVIGTCPY--CGAEDQKGDQCEVCGRPLTPEILINPRCAICGRPISF 182
Query: 205 RDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLKWGVP 264
RD+ H ++ + +L+ +I W N +W++EGL+ R ITRDL WG+P
Sbjct: 183 RDSAHYYIKMQDFAERLKRWIEKQ----PWKPNVKNMVLSWIEEGLEERAITRDLNWGIP 238
Query: 265 VPL--ERFKEKVFYVWFDAPIGYVSITSCYT------NEWEQWWKNPE-NVELYQFMGKD 315
VPL E K KV YVWF+APIGY+SIT + NEW+++W N + + F+GKD
Sbjct: 239 VPLDEEDMKGKVLYVWFEAPIGYISITIEHFKRIGKPNEWKKYWLNIDGQTRVIHFIGKD 298
Query: 316 NVPFHTVMFPSTLLGTGE--------NWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDA 367
N+PFH + +P+ L+ G+ W L I EYL E KFS S+ ++ ++
Sbjct: 299 NIPFHAIFWPAFLMAYGKYKDEEVEAEWNLPYDIPANEYLTLEGKKFSTSRNWAIWVHEF 358
Query: 368 KDTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQ 427
D P + RYYL T PE D+ F+++D + + N EL+NNLGNF++R L+F+ +
Sbjct: 359 LDV-FPADYLRYYLTTIMPETRDSDFSFSDFKVRINEELVNNLGNFVHRALTFV----NR 413
Query: 428 GYGSIVPDANGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQ 487
+ +VP+ E +L + E++ K ++ E + + K LK MS++S GN Y
Sbjct: 414 YFDGVVPER--GELDELDREALEEIEKAFKEVGELIMNYRFKDALKRVMSLASFGNRYFD 471
Query: 488 ESQFWKLYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCD 547
Q WK KED+ + S+ +V L LLEPF+P S ++ LNL
Sbjct: 472 HKQPWKTAKEDKVRTGTTVNISLQIVKALGILLEPFLPDASEKIWHLLNL---------- 521
Query: 548 EKGDVDRARRPWEI--IPAGHKIGSPNPLFKELKDDEVEFFRSKFAGS---QADRIIRAE 602
D +R WE +PAGHK+ P LFK++ DD++ +F + + RI+ +
Sbjct: 522 -----DEVKR-WEFRELPAGHKVRKPEILFKKVTDDQIIYFILNYMAKGNPEGARILLDK 575
Query: 603 AEAAKTAEQLKKTKISVDGGGKKQKSAKSTAGAKSKTTAEPEI---SIARLDIRVGKITK 659
+ ++ K K + ++ K + K E + A+LD+RVGKI +
Sbjct: 576 YYKREDVIRVAKEKFGDEAEVVLRRVYKDIKLKEKKEGKEMYVKFDDFAKLDLRVGKIIE 635
Query: 660 VQKHPDADALYVEEIDVGEVQPRTVVSGLVKHIPLEEMQERMVCVLCNLKPVAMRGIKSH 719
V+ HP+AD LYV ++D+G+ + RT+V+GL K+ EE+ R V V+ NL+P +RGI S
Sbjct: 636 VKDHPNADKLYVVKVDLGD-EVRTLVAGLKKYYKPEELLNRYVVVVANLEPKKLRGIGSQ 694
Query: 720 AMVLCASTSDNTKVELVEPPKSAKIGERV 748
M+L A D +V L+ P K K+G +V
Sbjct: 695 GMLLAA--DDGERVALLMPDKEVKLGAKV 721
>sp|B6YUN0|SYM_THEON Methionine--tRNA ligase OS=Thermococcus onnurineus (strain NA1)
GN=metG PE=3 SV=1
Length = 733
Score = 469 bits (1208), Expect = e-131, Method: Compositional matrix adjust.
Identities = 273/766 (35%), Positives = 417/766 (54%), Gaps = 80/766 (10%)
Query: 25 LITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMEDN 84
++TSALPY N H G++ G+ L AD+F R+ RL+G I+I GTDE+GT +A+++
Sbjct: 5 MVTSALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEEVIFISGTDEHGTPITFRALKEG 64
Query: 85 CSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQQ 144
SP+EI D YH K ++ ISFD FGRT P Q F K L+N+ LI+ +Q
Sbjct: 65 KSPREIVDYYHEHIKTTFERAKISFDYFGRTELPVHYRISQDFFLKALENDHLIKKVSKQ 124
Query: 145 PYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAPQI 204
YC+ K FL DR V GTCP+ C E+ RGDQCE CG L +L +P+C +C N
Sbjct: 125 AYCEHDKMFLPDRYVIGTCPY--CGAENQRGDQCEVCGHPLTPEELINPRCNICGNPITF 182
Query: 205 RDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLKWGVP 264
RD+ H ++ + KL+E++ + W N W++EGL+ R ITRDL WG+P
Sbjct: 183 RDSAHYYIKMQDFAEKLKEWVQSQE---HWKPNVKNTVLGWIEEGLEERAITRDLNWGIP 239
Query: 265 VPL--ERFKEKVFYVWFDAPIGYVSITSCYT------NEWEQWWKNPE-NVELYQFMGKD 315
VPL E K KV YVWF+APIGY+SIT + NEW+++W N + ++ F+GKD
Sbjct: 240 VPLDDEDVKGKVLYVWFEAPIGYISITVEHLKREGKENEWKKFWLNLDGGTKVIHFIGKD 299
Query: 316 NVPFHTVMFPSTLLGTGE--------NWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDA 367
N+PFH + +P+ L+ G+ W L I EYLN E KFS S+ ++ ++
Sbjct: 300 NIPFHAIFWPAFLMAYGKYKEEETEAEWLLPYDIPANEYLNLEGKKFSTSRNWAIWVHEF 359
Query: 368 KDTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQ 427
D P + RYYL PE D+ F++AD + K N EL+NNLGNF++R L+F+ +
Sbjct: 360 LDA-FPADYLRYYLTAIMPETRDSDFSFADFKTKINEELVNNLGNFVHRALTFV----NR 414
Query: 428 GYGSIVPDANGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQ 487
+ +VP+ E L + E++ K +++ E + + K L+ M ++ GN Y
Sbjct: 415 YFDGVVPER--GELDDLDRQAFEEIEKALKETGELISTYRFKDALRRVMELAIFGNRYFD 472
Query: 488 ESQFWKLYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCD 547
+ WK KE++ + + S+ +V +L LLEPF+P S ++ LNL+ K
Sbjct: 473 YQKPWKTAKENRERTATTVNVSLQIVKVLGVLLEPFLPDASEKIWHLLNLEETKR----- 527
Query: 548 EKGDVDRARRPWEI--IPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQADRIIRAEAEA 605
WE IPAGH++ LF+++ D+++ FF + I R E+
Sbjct: 528 -----------WEFIEIPAGHRVRRAEILFRKVTDEDIIFFIVNY-------IARGNPES 569
Query: 606 AK-TAEQLKKT----KISVDGGGKKQKSA-----KSTAGAKSKTTAEPEI---------- 645
A+ ++ +T K++++ G+K+K KS G + + A+ E
Sbjct: 570 ARLLLDKYYRTDDVVKVALERFGEKRKDEAMAILKSIYGERLEKKAKKEKKKEGGKVEYV 629
Query: 646 ---SIARLDIRVGKITKVQKHPDADALYVEEIDVGEVQPRTVVSGLVKHIPLEEMQERMV 702
+LD+RVGKI VQ HP+AD LYV ++D+G + R +V+GL K+ +++ R V
Sbjct: 630 KFEDFMKLDLRVGKIVDVQDHPNADKLYVVKVDLGN-EVRQLVAGLKKYYSKDDLLNRYV 688
Query: 703 CVLCNLKPVAMRGIKSHAMVLCASTSDNTKVELVEPPKSAKIGERV 748
++ NL+P +RGI+S M+L A +N V L+ P K K+G R+
Sbjct: 689 VIIANLEPKKLRGIESQGMLLAADDGEN--VALLMPDKEVKLGARI 732
>sp|O58721|SYM_PYRHO Methionine--tRNA ligase OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=metG PE=3 SV=1
Length = 723
Score = 468 bits (1204), Expect = e-131, Method: Compositional matrix adjust.
Identities = 270/762 (35%), Positives = 408/762 (53%), Gaps = 82/762 (10%)
Query: 25 LITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMEDN 84
++TSALPY N H G++ G+ L AD+F R+ RL+G + ++ICGTDE+GT +A+++
Sbjct: 5 MVTSALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEDVVFICGTDEHGTPISFRALKEG 64
Query: 85 CSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQQ 144
SP+EI D++H K ++ ISFD FGRT P + Q F K +N L++ +Q
Sbjct: 65 RSPREIVDEFHEHIKITFQRAKISFDFFGRTELPIHYKLSQQFFLKAYENGHLVKKVTKQ 124
Query: 145 PYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAPQI 204
YC+ K FL DR V GTCPF C E+ RGDQCE CG+ L L +P+C +C
Sbjct: 125 AYCEHDKMFLPDRFVIGTCPF--CGAENQRGDQCEVCGRPLTPEILINPRCALCGRPISF 182
Query: 205 RDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLKWGVP 264
R++ H ++ + KL+ +I N W N W++EGL+ R ITRDL WG+P
Sbjct: 183 RESAHYYIKMQDFAEKLKRWIENQ----PWKPNVKNMVLKWIEEGLEERAITRDLNWGIP 238
Query: 265 VPL--ERFKEKVFYVWFDAPIGYVSITSCYT------NEWEQWWKNPEN-VELYQFMGKD 315
VPL E K KV YVWF+APIGY+SIT Y NEW+++W N ++ + F+GKD
Sbjct: 239 VPLDEEDMKNKVLYVWFEAPIGYISITMEYFKRLGKPNEWKKYWLNIDSETRVIHFIGKD 298
Query: 316 NVPFHTVMFPSTLLGTGE--------NWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDA 367
N+PFH + +P+ L+ G+ W L I EYL E KFS S+ ++ ++
Sbjct: 299 NIPFHAIFWPAFLMAYGKYKDEEVEAEWNLPYDIPANEYLTLEGKKFSTSRNWAIWVHEF 358
Query: 368 KDTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQ 427
D P + RYYL T PE D+ F++A+ + + N EL+NNLGNF++R ++F+ +
Sbjct: 359 LDV-FPADYLRYYLTTIMPETRDSDFSFAEFKTRINEELVNNLGNFVHRAMTFV----NR 413
Query: 428 GYGSIVPDANGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQ 487
+ IVP+ E +L + E++ K E+ E + + K LK M ++S GN Y
Sbjct: 414 YFDGIVPER--GELDELDRQALEEIEKAFEEVGELIMNYRFKDALKRVMELASFGNKYFD 471
Query: 488 ESQFWKLYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCD 547
Q WK KED+ + S+ +V L LLEPF+P S ++ LNL K +
Sbjct: 472 HKQPWKTAKEDRARTGTTVNISLQIVKALGILLEPFLPDASEKIWHLLNLDEVKKWKFKE 531
Query: 548 EKGDVDRARRPWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQADRIIRAEAEAAK 607
+PAGH++ LFK++ D+++ +F + G R E AK
Sbjct: 532 --------------LPAGHRVRKAEILFKKVTDEQIIYFILNYMG-------RNNPEGAK 570
Query: 608 T-AEQLKKTKISVDGGGKKQKSAKSTAGAKSKTTAEPEI--------------------S 646
E+ K + + K AK G +SK +
Sbjct: 571 MLLEKYYKREDVI-------KVAKEKFGEESKIILKRIYKDIKLEEGKEEKEMEYVKFED 623
Query: 647 IARLDIRVGKITKVQKHPDADALYVEEIDVGEVQPRTVVSGLVKHIPLEEMQERMVCVLC 706
A+LD+RVGKI +V+ HP+AD LY+ ++D+G+ + RT+V+GL K+ EE+ + V ++
Sbjct: 624 FAKLDLRVGKIIEVKDHPNADKLYIVKVDLGK-EVRTLVAGLKKYYKPEELLNKYVIIVA 682
Query: 707 NLKPVAMRGIKSHAMVLCASTSDNTKVELVEPPKSAKIGERV 748
NL+P +RG++S M+L A +N V L+ P K K+G +V
Sbjct: 683 NLEPKKLRGVESQGMLLAADDGEN--VALLMPDKEVKLGAKV 722
>sp|Q5JDZ7|SYM_PYRKO Methionine--tRNA ligase OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=metG PE=3 SV=1
Length = 741
Score = 459 bits (1180), Expect = e-128, Method: Compositional matrix adjust.
Identities = 265/772 (34%), Positives = 411/772 (53%), Gaps = 84/772 (10%)
Query: 25 LITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMEDN 84
++TSALPY N H G++ G+ L AD+F R+ RL+G ++ICGTDE+GT +A+++
Sbjct: 5 MVTSALPYANGPIHAGHLAGAYLPADIFVRYLRLKGEEVLFICGTDEHGTPITFRALKEG 64
Query: 85 CSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQQ 144
SP+EI D++H K ++ ISFD FGRT P Q F K L+N L++ +Q
Sbjct: 65 RSPREIVDEFHEHIKTTFERAKISFDFFGRTELPVHYRLSQEFFLKALENGHLVKKVTKQ 124
Query: 145 PYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAPQI 204
YC+ K FL DR V GTCP+ C E+ RGDQCE CG L L +P+C +C N
Sbjct: 125 AYCEHDKMFLPDRYVIGTCPY--CGAENQRGDQCEVCGHPLTPEILINPRCNICGNPITF 182
Query: 205 RDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLKWGVP 264
+D+ H ++ + +L++++ + W N W+ EGL+ R ITRDL WG+P
Sbjct: 183 KDSAHYYIRMQDFEERLKKWVESQE---HWKPNVRNTVLGWINEGLEERAITRDLDWGIP 239
Query: 265 VPL--ERFKEKVFYVWFDAPIGYVSITSCYT------NEWEQWWKNPEN-VELYQFMGKD 315
VPL E K KV YVWF+APIGY+SIT + NEW+++W N + ++ F+GKD
Sbjct: 240 VPLDDEDVKGKVLYVWFEAPIGYISITIEHLKREGKENEWKKFWLNLDGETKVIHFIGKD 299
Query: 316 NVPFHTVMFPSTLLGTGE--------NWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDA 367
N+PFH + +P+ L+ G+ W L I EYLN E KFS S+ ++ ++
Sbjct: 300 NIPFHAIFWPAFLMAYGKYRDEEVEAEWNLPYDIPANEYLNLEGKKFSTSRNWAIWVHEF 359
Query: 368 KDTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQ 427
D P + RYYL PE D+ F++ D + K N EL+NNLGNF++R ++F+ +
Sbjct: 360 LDV-WPADYLRYYLTAIMPETRDSDFSFEDFKKKINEELVNNLGNFVHRAMTFV----NR 414
Query: 428 GYGSIVPDANGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQ 487
+ +VP+ E + L + E++ K ++ E + + K LK M ++ GN Y
Sbjct: 415 YFDGVVPER--GELNDLDRQALEEIEKAFKETGELISNYRFKDALKRVMELAIFGNRYFD 472
Query: 488 ESQFWKLYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCD 547
+ WK KE++ + + S+ +V L LLEPF+P S ++ LNL+ K S
Sbjct: 473 YQKPWKTAKENRERTATTVNVSLQIVKALGILLEPFLPDASEKIWHLLNLEEVKKWSF-- 530
Query: 548 EKGDVDRARRPWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQADRIIRAEAEAAK 607
E +PAGH++ P+F+++ D E+ +F + G R ++AK
Sbjct: 531 ------------EELPAGHRVRKAFPMFRKVTDGEIIYFIVNYIG-------RGNPDSAK 571
Query: 608 TA-----EQLKKTKISVDGGGKKQKSA-----KSTAGAKSKTTAEPEI------------ 645
+Q K++++ G+K+K KS G + K +
Sbjct: 572 ILLNKYYKQEDVVKVTLERFGEKRKDEALALLKSIYGDEFKGEKPEKAGKAEKKEKVKEG 631
Query: 646 ---------SIARLDIRVGKITKVQKHPDADALYVEEIDVGEVQPRTVVSGLVKHIPLEE 696
A+LD+RVGKI +V HP+AD LYV ++D+G+ + R +V+GL K+ EE
Sbjct: 632 KKMEYVSFDEFAKLDLRVGKIIEVNDHPNADRLYVVKVDLGD-EVRQLVAGLKKYYKPEE 690
Query: 697 MQERMVCVLCNLKPVAMRGIKSHAMVLCASTSDNTKVELVEPPKSAKIGERV 748
+ V ++ NL+P +RG++S M+L A D +V L+ P K K+G R+
Sbjct: 691 LLGHYVVIIANLEPKKLRGVESQGMLLAA--DDGERVALLMPDKEVKLGARI 740
>sp|A0M5Z9|SYM_GRAFK Methionine--tRNA ligase OS=Gramella forsetii (strain KT0803)
GN=metG PE=3 SV=1
Length = 691
Score = 447 bits (1149), Expect = e-124, Method: Compositional matrix adjust.
Identities = 260/724 (35%), Positives = 388/724 (53%), Gaps = 65/724 (8%)
Query: 26 ITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMEDNC 85
IT+ALPY N H+G++ G + AD+++RF R++GY+ ++CG+DE+G KA ++
Sbjct: 10 ITAALPYTNGPIHIGHLAGVYVPADIYSRFLRMQGYDVAFVCGSDEHGVPITIKAKKEGV 69
Query: 86 SPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQQP 145
+P+++ DKY+ I K ++ F I+FDN+ RTS + A FKK+ ++ IE + +Q
Sbjct: 70 TPQDVVDKYNGIIKKSFEDFGITFDNYSRTSGKTHHDTASAFFKKMYEDGKFIEESTEQL 129
Query: 146 YCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAPQIR 205
Y + +FLADR V GTCP C E A GDQCE+CG LNATDL +PK + P ++
Sbjct: 130 YDEEAGQFLADRFVTGTCP--KCGNEEAYGDQCESCGTSLNATDLINPKSAITGAVPTLK 187
Query: 206 DTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLKWGVPV 265
+T H FL L + L+E+I W N +W+ +GL+ R +TRDL WG+PV
Sbjct: 188 ETRHWFLPLDQYEDFLKEWILK-GHKSDWKSNVYGQVKSWIDDGLRARAVTRDLDWGIPV 246
Query: 266 PLERFKEKVFYVWFDAPIGYVSITSCYT----NEWEQWWKNPENVELYQFMGKDNVPFHT 321
P+E KV YVWFDAPIGY+S T + +WE +WK+ EN +L F+GKDN+ FH
Sbjct: 247 PVEGGDGKVLYVWFDAPIGYISSTKEWAEREGKDWEPYWKD-ENTKLVHFIGKDNIVFHC 305
Query: 322 VMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGND-AKDTNIPVEVWRYY 380
++FP L G ++ L + + E+LN E K S SK V+ ++ ++ +V RY
Sbjct: 306 IIFPVMLKAHG-DYILPENVPANEFLNLEGKKLSTSKNWAVWLHEYLEEFPDQQDVLRYV 364
Query: 381 LLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIVPDANGAE 440
L N PE D FTW D QA++NNEL+ GNFINRV+ K Y IVP+ GA
Sbjct: 365 LTANAPETKDNDFTWKDFQARNNNELVAIFGNFINRVVVLTNKY----YNGIVPEP-GAY 419
Query: 441 SHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLYKEDQP 500
S KT+AE + Y ++E+ + ++ M+++ GN YL + + WKL K D+
Sbjct: 420 SEIDEKTIAE-LKAYPSVIASSIERYRFREAQGELMNLARLGNKYLADEEPWKLIKTDEE 478
Query: 501 SCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCDEKGDVDRARRPWE 560
+M ++ + L+ + EPF+P S ++ K LN E D D D
Sbjct: 479 RVKTIMYVALQIASALSIISEPFLPFTSAKLKKMLNHVDES----SDNTPDWDIIGTKEA 534
Query: 561 IIPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQADRIIRAEAEAAKTAEQLKKTKISVD 620
+I GH+IG LF +++D+++E K E+L+ TK
Sbjct: 535 LILGGHQIGKAELLFSKIEDEQME----------------------KQLEKLEATK---- 568
Query: 621 GGGKKQKSAKSTAGAKSKTTAEPEISIA------RLDIRVGKITKVQKHPDADALYVEEI 674
TA A AEP+ IA ++D+RVG I + QK P L V ++
Sbjct: 569 -----------TANAMEDQKAEPQKEIATFEDFTKMDLRVGTIIEAQKMPKTKKLMVLKV 617
Query: 675 DVGEVQPRTVVSGLVKHIPLEEMQERMVCVLCNLKPVAMRGIKSHAMVLCASTSDNTKVE 734
D G + RTVVSG+ +H E++ + V VL NL P +RG+ S M+L ++ K+
Sbjct: 618 DTG-IDQRTVVSGIAEHFKAEDIIGKKVTVLANLAPRKLRGVDSEGMILMTENAEG-KLV 675
Query: 735 LVEP 738
V P
Sbjct: 676 FVNP 679
>sp|Q8SQW5|SYMC_ENCCU Probable methionine--tRNA ligase, cytoplasmic OS=Encephalitozoon
cuniculi (strain GB-M1) GN=ECU11_0890 PE=3 SV=1
Length = 550
Score = 441 bits (1134), Expect = e-122, Method: Compositional matrix adjust.
Identities = 246/567 (43%), Positives = 334/567 (58%), Gaps = 42/567 (7%)
Query: 25 LITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMEDN 84
ITSALPYVNN PHLGNIIGSVLS DV++R+C+ +G ++YICGTDEYGTA E +A+
Sbjct: 4 FITSALPYVNNQPHLGNIIGSVLSGDVYSRYCKKKGEVSVYICGTDEYGTAIEMEAISQG 63
Query: 85 CSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQQ 144
+P EIC+K +HK VY WF+I FD FG TS+ T Q +F K+ DN E ++Q
Sbjct: 64 VTPLEICEKNRKLHKQVYDWFNIDFDYFGFTSSATHTGLVQDLFMKMYDNGHFSEVEIEQ 123
Query: 145 PYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAPQI 204
YC+ C FLADR + G C F C ARGDQC++CG N+ +L P+C +C ++P +
Sbjct: 124 FYCEHCGLFLADRFIVGECKF--CGDGRARGDQCDSCGHTYNSLELLSPRCSICSSSPVV 181
Query: 205 RDTNHLFLDLPALRNKLEE-YINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLK--W 261
R T HLF DL A R LEE Y N + WSQNA W+ RC+TRDLK W
Sbjct: 182 RATTHLFFDLEAFRPSLEELYRTNGHL---WSQNAQNIFRQWISMEFYPRCMTRDLKFNW 238
Query: 262 GVPVPLERFKEKVFYVWFDAPIGYVSITSCYTNE-WEQWWKNPENVELYQFMGKDNVPFH 320
GVPVPLE+FKEKVFYVWFDAPIGY++ E + +W K + EL QFMGKDNV FH
Sbjct: 239 GVPVPLEKFKEKVFYVWFDAPIGYLTFLKELVGEDFGEWCK---DAELVQFMGKDNVAFH 295
Query: 321 TVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDTNIPVE-VWRY 379
TV+FP+ L TGE + +++ +S TEYL +E+ KFSKS+ G+FG D + +WRY
Sbjct: 296 TVIFPAMLYATGEKYPVVRRLSATEYLQFENEKFSKSRRHGIFGLDLVGGGLGKSCMWRY 355
Query: 380 YLLTNRPEVS-DTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIVPDANG 438
YLL RPE + D+ FT++D + +L+NNLGNF+NRVL +I + D+
Sbjct: 356 YLLKIRPESTKDSNFTFSDFRQSVTADLINNLGNFVNRVLKYIQSKCNSRVSLLELDSG- 414
Query: 439 AESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLYKED 498
K E V + +Y ME++KL++ L+ M I GN Y+QE + D
Sbjct: 415 ------DKKCIEDVNELYCKYKAKMEEIKLREALQVVMEICRRGNEYIQEG----VRSRD 464
Query: 499 QPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCDEKGDVDRARRP 558
+ + S+ + L+ LL PF+P S+E+ + NL E+ + R
Sbjct: 465 RKGHFFCLGFSI--IGLVGTLLHPFIPVTSLEILRMCNL----------EETMFPESMR- 511
Query: 559 WEIIPAGHKIGSP-NPLFKELKDDEVE 584
I GH +GS PLF++ +++E
Sbjct: 512 ---IVDGHTMGSDIRPLFEDFTTEQIE 535
>sp|A8ZQ66|SYM1_ACAM1 Methionine--tRNA ligase 1 OS=Acaryochloris marina (strain MBIC
11017) GN=metG1 PE=3 SV=1
Length = 558
Score = 439 bits (1130), Expect = e-122, Method: Compositional matrix adjust.
Identities = 234/575 (40%), Positives = 329/575 (57%), Gaps = 28/575 (4%)
Query: 25 LITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMEDN 84
LITSALPY+N + HLGN++GS+L AD++ARF R G +YIC TDE+GT E A++
Sbjct: 4 LITSALPYINGIKHLGNLVGSMLPADIYARFLRQEGEEVLYICATDEHGTPAEIAAIDAG 63
Query: 85 CSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQQ 144
E C K + K++YK F +SFD FGRTS P+ E Q +++L N++ E + Q
Sbjct: 64 LEVAEFCAKQYHKQKEIYKRFGLSFDYFGRTSAPENHELTQYFYQQLAKQNFIEEREISQ 123
Query: 145 PYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAP-Q 203
Y +RFL DR V GTCP C YE ARGDQCENC K+L T+L P+ + + +
Sbjct: 124 FYALDDQRFLPDRYVTGTCPH--CGYEQARGDQCENCTKVLTPTELIKPRSTISGSTHLE 181
Query: 204 IRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLKWGV 263
+R + HLFL L L +++ +++ + WS WL EGLK RCITRDL WGV
Sbjct: 182 LRTSRHLFLRLDKLSDEVRNWVDKQT---QWSTLTKSIALKWLNEGLKSRCITRDLVWGV 238
Query: 264 PVPLERFKEKVFYVWFDAPIGYVSITSCY----TNEWEQWWKNPENVELYQFMGKDNVPF 319
PVP E F+ KVFYVWFDAPIGY+S T + N+WE WWK ++V QFM KDN+PF
Sbjct: 239 PVPTEGFERKVFYVWFDAPIGYISATKAWGDITNNDWECWWKESDDVHYTQFMAKDNLPF 298
Query: 320 HTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDTNIPVEVWRY 379
HT+M+P+T+LG+ E W ++ I +LNY GKFS S GVF + A + + WRY
Sbjct: 299 HTIMWPATILGSREPWKMVDYIKGFNWLNYYGGKFSTSSQRGVFLDQALEI-ASADNWRY 357
Query: 380 YLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIVPDAN-- 437
L+ N PE +D+ FTW Q + N EL +NLGNF+NR+L F A +G +P+
Sbjct: 358 MLIANAPESADSAFTWEQFQKQVNKELADNLGNFVNRILKFTASR----FGMTLPEGGTP 413
Query: 438 GAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLYKE 497
G +L T E V K + +YL +E ++ +T ++ GN Y+ W L+K
Sbjct: 414 GDAEAELQVTCNELVEK-LRKYLHNLE---FRRATETLNALWRTGNQYIDVRAPWVLFKT 469
Query: 498 DQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCDEKGDVDRARR 557
DQ ++V+RT V L+ L A PF+P + + L L + E D+
Sbjct: 470 DQDETAMVIRTCVNLIRLYAISSAPFIPHTTQALFDALQLTDVERRHTMTEASDL----- 524
Query: 558 PWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAG 592
++ AG P PLF+++ DD V ++++ G
Sbjct: 525 --TLLAAGRSFMVPAPLFQKIDDDLVAELKAQYGG 557
>sp|Q82F60|SYM_STRAW Methionine--tRNA ligase OS=Streptomyces avermitilis (strain ATCC
31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 /
MA-4680) GN=metG PE=3 SV=1
Length = 574
Score = 428 bits (1100), Expect = e-118, Method: Compositional matrix adjust.
Identities = 227/586 (38%), Positives = 336/586 (57%), Gaps = 35/586 (5%)
Query: 25 LITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMEDN 84
LITSALPY+N + HLGN++GS+L ADV++R+ R RG++ +YIC TDE+GT E A E
Sbjct: 5 LITSALPYINGIKHLGNMVGSMLPADVYSRYLRQRGHDVLYICATDEHGTPAELAAKERG 64
Query: 85 CSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQQ 144
E C + H K VY F+++FD FGR+S+ Q E Q ++L +N ++ E ++Q
Sbjct: 65 LPVDEFCAQAHDAQKAVYDGFELAFDYFGRSSSEQNREITQHFARRLNENGFIEERAIRQ 124
Query: 145 PYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAP-Q 203
Y RFL DR VEGTCP C Y+ ARGDQCENC ++L+ TDL +P+ + + +
Sbjct: 125 VYSPADGRFLPDRYVEGTCPH--CGYDKARGDQCENCTRVLDPTDLINPRSAISGSTDLE 182
Query: 204 IRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLKWGV 263
+R+T HLFL L++++EE++ W Q A WL EGL R ITRDL WGV
Sbjct: 183 VRETKHLFLLQSKLQHEVEEWVARHE--EEWPQLASSIARKWLNEGLHDRAITRDLDWGV 240
Query: 264 PVPLERFKE-----KVFYVWFDAPIGYVSITSCYTN------EWEQWWKNPEN----VEL 308
PVP + + E KVFYVWFDAPI Y+ T +++ +W+ WW + ++ V
Sbjct: 241 PVPADTWPELAAEGKVFYVWFDAPIEYIGATKEWSDLDPENRDWKSWWYDADSGENPVRY 300
Query: 309 YQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAK 368
+FM KDNVPFHTVMFP+T LG E W + + +L Y GKFS S+ GVF + A
Sbjct: 301 TEFMAKDNVPFHTVMFPATELGVREPWKKVDYVKAFNWLTYYGGKFSTSQKRGVFTDHAL 360
Query: 369 DTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQG 428
+ +P + WRY+L+ N PE D+ FTW A N +L + LGNF+NRVLSF K
Sbjct: 361 EI-LPADYWRYFLIANAPESDDSSFTWEHFTATVNKDLADTLGNFVNRVLSFSKK----R 415
Query: 429 YGSIVPDANGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQE 488
+G VP GA + + L E++ + +Y ME ++ ++ ++ S GN+YL+E
Sbjct: 416 FGEEVP--AGAPAGESETKLGEEIAALLAEYESHMETLQFRKAAAALRALWSAGNSYLEE 473
Query: 489 SQFWKLYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLC-D 547
W K + ++ +RT++ L+HL + + EPF+P+ S + L + + D
Sbjct: 474 KAPWLEIKTNPEGAALTLRTAMNLIHLYSVVSEPFIPASSKAMRSAFALSEDTATWVTQD 533
Query: 548 EKGDVDRARRPWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAGS 593
E +D +PAG P LF ++ D+++E ++ +F G+
Sbjct: 534 EAKSLDS-------VPAGTPFTVPPVLFAKITDEDLESYKERFGGA 572
>sp|A6LFP0|SYM_PARD8 Methionine--tRNA ligase OS=Parabacteroides distasonis (strain ATCC
8503 / DSM 20701 / NCTC 11152) GN=metG PE=3 SV=1
Length = 679
Score = 424 bits (1091), Expect = e-117, Method: Compositional matrix adjust.
Identities = 261/732 (35%), Positives = 387/732 (52%), Gaps = 64/732 (8%)
Query: 22 RNILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAM 81
+ LIT+ALPY N H+G++ G + AD++AR+ RL+G + I G+DE+G +A
Sbjct: 6 KRTLITTALPYANGPVHIGHLAGVYVPADIYARYLRLKGEEVLMIGGSDEHGVPITLRAK 65
Query: 82 EDNCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENT 141
++ +P+++ D+YH I K ++ F I+FD + RT++ + F+ L D IE T
Sbjct: 66 KEGITPQDVVDRYHGIIKKSFEEFGITFDIYSRTTSATHHQMASDFFRTLYDKGEFIEKT 125
Query: 142 MQQPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNA 201
+Q Y + K+FLADR + GTCP C E A GDQCE CG L+ TDL DPK + +
Sbjct: 126 SEQYYDEEAKQFLADRYIMGTCPH--CGNEKAYGDQCEACGTSLSPTDLIDPKSAISGSK 183
Query: 202 PQIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLKW 261
P +R+T H +L L L ++I + W N +WL GL+ R ++RDL W
Sbjct: 184 PVMRETKHWYLPLDKWEPFLRKWI--LEDHKEWKPNVYGQCKSWLDMGLQPRAVSRDLDW 241
Query: 262 GVPVPLERFKEKVFYVWFDAPIGYVSIT-SCYTNEWEQWWKNPENVELYQFMGKDNVPFH 320
G+PVP+E + KV YVWFDAPIGY+S T + WE WWK+PE ++ F+GKDN+ FH
Sbjct: 242 GIPVPVEGAEGKVLYVWFDAPIGYISNTKELLPDSWETWWKDPE-TKMVHFIGKDNIVFH 300
Query: 321 TVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGND-AKDTNIPVEVWRY 379
++FPS L G ++ L + + E+LN E K S S+ V+ N+ D +V RY
Sbjct: 301 CIVFPSMLKAEG-SYNLPENVPANEFLNLEGDKISTSRNWAVWLNEYLVDMPGKQDVLRY 359
Query: 380 YLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIVPDANGA 439
L N PE D FTW D QA++NNEL+ LGNF+NR L K + VP A
Sbjct: 360 VLTANAPETKDNDFTWKDFQARNNNELVAILGNFVNRALVLTDK----YFEGKVPVAGEL 415
Query: 440 ESH--QLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLYKE 497
+ Q K A+ V + VE+ L+ + K AM+++ GN YL + + WKL K
Sbjct: 416 TDYDRQTLKDFAD-VKENVERLLDTYH---FRDAQKEAMNLARIGNKYLADMEPWKLAKT 471
Query: 498 DQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVE-VNKQLNLQPEKHISLCDEKGDVDRAR 556
D P + +M ++ + LA EPF+P FS+E +NK LN++P L G D
Sbjct: 472 DMPRVATIMNIALQITANLAIAFEPFLP-FSMEKLNKMLNVEPLGWNRL----GATD--- 523
Query: 557 RPWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQADRIIRAEAEAAKTAEQLKKTK 616
++ AGH++G LF++++D +E K ++ +A EA A+ +++
Sbjct: 524 ----LLEAGHQLGKAELLFEKIEDSVIEAQVQKLLDTK-----KANEEANYKAKPIREN- 573
Query: 617 ISVDGGGKKQKSAKSTAGAKSKTTAEPEISIARLDIRVGKITKVQKHPDADALYVEEIDV 676
I D +LDIRVG + + K P AD L ID
Sbjct: 574 IEFD-------------------------DFMKLDIRVGTVLECVKVPKADKLLQFRIDD 608
Query: 677 GEVQPRTVVSGLVKHIPLEEMQERMVCVLCNLKPVAMRGIKSHAMVLCASTSDNTKVELV 736
G ++ RT+VSG+ +H EE+ + VC + NL P ++GI S M+L A D K+ ++
Sbjct: 609 G-LEKRTIVSGIAQHYKPEELVGKQVCFIANLAPRKLKGIVSEGMILSAENFDG-KLAVI 666
Query: 737 EPPKSAKIGERV 748
P K K G V
Sbjct: 667 TPEKEVKPGSEV 678
>sp|C4V943|SYMC_NOSCE Probable methionine--tRNA ligase, cytoplasmic OS=Nosema ceranae
(strain BRL01) GN=NCER_101052 PE=3 SV=2
Length = 560
Score = 424 bits (1089), Expect = e-117, Method: Compositional matrix adjust.
Identities = 232/574 (40%), Positives = 332/574 (57%), Gaps = 44/574 (7%)
Query: 25 LITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMEDN 84
+ITSALPYVNN PHLGNIIG VLSAD++ARFCR + +++ GTDEYGTA E A N
Sbjct: 10 IITSALPYVNNQPHLGNIIGCVLSADMYARFCRKNNEDVVFLSGTDEYGTAIEMAAFAQN 69
Query: 85 CSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQQ 144
+P +IC++ +IHK +Y WF+I FD FG T++ T+ Q F K+ +N + E ++Q
Sbjct: 70 KTPLQICEENRIIHKKIYDWFNIDFDFFGHTTSTAHTKNVQDFFNKIHNNGFFTEQEIEQ 129
Query: 145 PYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAPQI 204
+CD C+ FLADR V GTC F C Y A+GDQC+ CG + DL D KC +C + P I
Sbjct: 130 FFCDKCQIFLADRYVVGTCKF--CKYTDAKGDQCDGCGHTYKSLDLIDAKCTLCHSFPNI 187
Query: 205 RDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLK--WG 262
+ T HLF D ++KL++ N S WS+N Q T +WL + L RC+TRDLK WG
Sbjct: 188 KSTRHLFFDFNNFKDKLQKLFNTNS--QYWSENGKQITKSWLDQELLPRCMTRDLKNRWG 245
Query: 263 VPVPLERFKEKVFYVWFDAPIGYVSITSCYT---NEWEQWWKNP--------ENVELYQF 311
VPVPL+ F+EKVFYVWFDA IGY + Y +E ++ KN ++ EL QF
Sbjct: 246 VPVPLKDFEEKVFYVWFDAVIGYFTFYKEYVAARSESKELDKNNVFATDNILQDCELVQF 305
Query: 312 MGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDTN 371
MGKDNV FHT++FPS + T +++ L+K +SVTE+L +E+ KFSKS+G G+FG D D
Sbjct: 306 MGKDNVFFHTIVFPSLIFATNDSYPLIKKLSVTEFLLFENEKFSKSRGHGIFGLDLVDNT 365
Query: 372 IPVE-VWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYG 430
+ +WRYYL RPE D+ F++ + +L NN+GNF NRVL +I K
Sbjct: 366 MGQSCLWRYYLAKIRPEKCDSNFSFTHFTNVIDADLNNNIGNFCNRVLKYI-KNKNDKLI 424
Query: 431 SIVPDANGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQ 490
SI + + + + K ++YL + +++++ L+ + IS GN Y+Q+
Sbjct: 425 SI------DKLEHRDDLMVQTIDKIYKEYLTSFSAIRIREALEKILEISKVGNEYVQQVV 478
Query: 491 FWKLYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCDEKG 550
K+ + P + + +V L+ LLEPF+P + EK + +C+ K
Sbjct: 479 SSKI---EVPKG---FQVAFSIVVLIGQLLEPFIP-----------VSSEKLLKMCNRKK 521
Query: 551 DVDRARRPWEIIPAGHKIGSPNPLFKELKDDEVE 584
+ + II + PLF +L D +E
Sbjct: 522 --ENFCESFYIIKSAEIGDDIKPLFNKLDDSLIE 553
>sp|Q7MXK7|SYM_PORGI Methionine--tRNA ligase OS=Porphyromonas gingivalis (strain ATCC
BAA-308 / W83) GN=metG PE=3 SV=1
Length = 680
Score = 423 bits (1087), Expect = e-117, Method: Compositional matrix adjust.
Identities = 257/735 (34%), Positives = 389/735 (52%), Gaps = 69/735 (9%)
Query: 22 RNILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAM 81
+ LIT+ALPY N H+G++ G + AD++AR+ RLRG + + I G+DE+G KA
Sbjct: 6 KRTLITTALPYANGPVHIGHLAGVYVPADIYARYLRLRGRDCLLIGGSDEHGVPIALKAK 65
Query: 82 EDNCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENT 141
+ C+P+E+ D+YH + K ++ ISFD + RT++ FK L + +E T
Sbjct: 66 AEGCTPQEVVDRYHELIKRSFEGLGISFDIYSRTTSDIHRRTASEFFKTLYEKGEFVEQT 125
Query: 142 MQQPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNA 201
+Q Y + K+FLADR + GTCP C+ + A GDQCE CG LNATDL DP+ + +A
Sbjct: 126 SEQYYDEEAKQFLADRYIIGTCPH--CSNDRAYGDQCEACGTSLNATDLIDPRSTISGSA 183
Query: 202 PQIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLKW 261
P +R+T H +L L L+E+I + W N +WL GL+ R ++RDL W
Sbjct: 184 PVLRETKHWYLPLDKHEPFLKEWI--LDGHKEWKSNVYGQCKSWLDMGLQPRAVSRDLDW 241
Query: 262 GVPVPLERFKEKVFYVWFDAPIGYVSIT-SCYTNEWEQWWKNPENVELYQFMGKDNVPFH 320
G+PVP+E + KV YVWFDAPIGY+S T + WE WWK+ E+ L F+GKDN+ FH
Sbjct: 242 GIPVPVEGAEGKVLYVWFDAPIGYISNTKELCPDSWETWWKS-EDTRLVHFIGKDNIVFH 300
Query: 321 TVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDTNIP--VEVWR 378
++FP+ L G ++ L + E+LN E K S S+ V+ ++ + P +V R
Sbjct: 301 CIVFPAMLRAEG-SFILPDNVPANEFLNLEGDKISTSRNWAVWLHEYLE-EFPGKQDVLR 358
Query: 379 YYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIVPDANG 438
Y L N PE D FTW D QA++NNEL+ GNF+NR L K + VP G
Sbjct: 359 YVLTANAPETKDNDFTWRDFQARNNNELVAIFGNFVNRALVLTHK----YFDGAVP-PKG 413
Query: 439 AESHQLTKTLAEKVGKYVEQYLE-AMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLYKE 497
+ ++T+ E V+Q LE ++ ++ LK AM+++ GN YL +++ WKL K
Sbjct: 414 ELTDCDSRTIEEFAA--VKQALEHQLDTFHFREALKEAMNLARIGNKYLADTEPWKLAKT 471
Query: 498 DQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLC----DEKGDVD 553
D + ++ S+ + LA EPF+P S ++ L+ C D G D
Sbjct: 472 DMNRVATILNLSLQITANLAIAFEPFLPFSSAKLMSMLSTD-------CPFGWDRLGSTD 524
Query: 554 RARRPWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQADRIIRAEAEAAKTAEQLK 613
++P GH +G+P LF++L+D +I A+ ++L+
Sbjct: 525 -------LLPEGHVLGNPELLFEKLEDS----------------VIDAQ------IQKLQ 555
Query: 614 KTKISVDGGGKKQKSAKSTAGAKSKTTAEPEISIARLDIRVGKITKVQKHPDADALYVEE 673
TK++ +K+A A E +LDIRVG + + +K P AD L
Sbjct: 556 DTKLA------NEKAAHQAAPIAEDIAFE---DFLKLDIRVGTVLECEKVPKADKLLRFR 606
Query: 674 IDVGEVQPRTVVSGLVKHIPLEEMQERMVCVLCNLKPVAMRGIKSHAMVLCASTSDNTKV 733
ID G + RT+VSG+ KH EE+ + VC + NL P ++GI+S M+L A +D + +
Sbjct: 607 IDDG-LSGRTIVSGIAKHYAPEELVGKQVCFIANLPPRKLKGIESEGMILSAEDADGS-L 664
Query: 734 ELVEPPKSAKIGERV 748
++ P G +V
Sbjct: 665 RVIMPAAEVAAGSQV 679
>sp|B2RHF5|SYM_PORG3 Methionine--tRNA ligase OS=Porphyromonas gingivalis (strain ATCC
33277 / DSM 20709 / JCM 12257) GN=metG PE=3 SV=1
Length = 680
Score = 423 bits (1087), Expect = e-117, Method: Compositional matrix adjust.
Identities = 257/735 (34%), Positives = 389/735 (52%), Gaps = 69/735 (9%)
Query: 22 RNILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAM 81
+ LIT+ALPY N H+G++ G + AD++AR+ RLRG + + I G+DE+G KA
Sbjct: 6 KRTLITTALPYANGPVHIGHLAGVYVPADIYARYLRLRGRDCLLIGGSDEHGVPIALKAK 65
Query: 82 EDNCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENT 141
+ C+P+E+ D+YH + K ++ ISFD + RT++ FK L + +E T
Sbjct: 66 AEGCTPQEVVDRYHELIKRSFEGLGISFDIYSRTTSDIHRRTASEFFKTLYEKGEFVEQT 125
Query: 142 MQQPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNA 201
+Q Y + K+FLADR + GTCP C+ + A GDQCE CG LNATDL DP+ + +A
Sbjct: 126 SEQYYDEEAKQFLADRYIIGTCPH--CSNDRAYGDQCEACGTSLNATDLIDPRSTISGSA 183
Query: 202 PQIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLKW 261
P +R+T H +L L L+E+I + W N +WL GL+ R ++RDL W
Sbjct: 184 PVLRETKHWYLPLDKHEPFLKEWI--LDGHKEWKSNVYGQCKSWLDMGLQPRAVSRDLDW 241
Query: 262 GVPVPLERFKEKVFYVWFDAPIGYVSIT-SCYTNEWEQWWKNPENVELYQFMGKDNVPFH 320
G+PVP+E + KV YVWFDAPIGY+S T + WE WWK+ E+ L F+GKDN+ FH
Sbjct: 242 GIPVPVEGAEGKVLYVWFDAPIGYISNTKELCPDSWETWWKS-EDTRLVHFIGKDNIVFH 300
Query: 321 TVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDTNIP--VEVWR 378
++FP+ L G ++ L + E+LN E K S S+ V+ ++ + P +V R
Sbjct: 301 CIVFPAMLRAEG-SFILPDNVPANEFLNLEGDKISTSRNWAVWLHEYLE-EFPGKQDVLR 358
Query: 379 YYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIVPDANG 438
Y L N PE D FTW D QA++NNEL+ GNF+NR L K + VP G
Sbjct: 359 YVLTANAPETKDNDFTWRDFQARNNNELVAIFGNFVNRALVLTHK----YFDGAVP-PKG 413
Query: 439 AESHQLTKTLAEKVGKYVEQYLE-AMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLYKE 497
+ ++T+ E V+Q LE ++ ++ LK AM+++ GN YL +++ WKL K
Sbjct: 414 ELTDYDSRTIEEFAA--VKQALEHQLDTFHFREALKEAMNLARIGNKYLADTEPWKLAKT 471
Query: 498 DQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLC----DEKGDVD 553
D + ++ S+ + LA EPF+P S ++ L+ C D G D
Sbjct: 472 DMNRVATILNLSLQITANLAIAFEPFLPFSSAKLMSMLSTD-------CPFGWDRLGSTD 524
Query: 554 RARRPWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQADRIIRAEAEAAKTAEQLK 613
++P GH +G+P LF++L+D +I A+ ++L+
Sbjct: 525 -------LLPEGHVLGNPELLFEKLEDS----------------VIDAQ------IQKLQ 555
Query: 614 KTKISVDGGGKKQKSAKSTAGAKSKTTAEPEISIARLDIRVGKITKVQKHPDADALYVEE 673
TK++ +K+A A E +LDIRVG + + +K P AD L
Sbjct: 556 DTKLA------NEKAAHQAAPIAEDIAFE---DFLKLDIRVGTVLECEKVPKADKLLRFR 606
Query: 674 IDVGEVQPRTVVSGLVKHIPLEEMQERMVCVLCNLKPVAMRGIKSHAMVLCASTSDNTKV 733
ID G + RT+VSG+ KH EE+ + VC + NL P ++GI+S M+L A +D + +
Sbjct: 607 IDDG-LGGRTIVSGIAKHYAPEELVGKQVCFIANLPPRKLKGIESEGMILSAEDADGS-L 664
Query: 734 ELVEPPKSAKIGERV 748
++ P G +V
Sbjct: 665 RVIMPAAEVAPGSQV 679
>sp|A2BLU2|SYM_HYPBU Methionine--tRNA ligase OS=Hyperthermus butylicus (strain DSM 5456
/ JCM 9403) GN=metG PE=3 SV=1
Length = 572
Score = 418 bits (1075), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/561 (39%), Positives = 329/561 (58%), Gaps = 29/561 (5%)
Query: 25 LITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMEDN 84
++ SA PYVN++PHLGN+IGS+LSADVFAR+ RL+G + +++ G+DE+GT E +A+
Sbjct: 5 IVASAWPYVNSIPHLGNLIGSILSADVFARYLRLKGEDVVFVSGSDEHGTPIEVEAIRRG 64
Query: 85 CSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQQ 144
PK++ D+ H K +++ F ISFDN+ RT P E + KL N ++ E
Sbjct: 65 VHPKQLTDQAHEYVKKLFEEFRISFDNYTRTENPVHKEFVREFMMKLYQNGYIFEQDDVL 124
Query: 145 PYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAPQI 204
PYC K FL DR V GTCP+ C +E A GDQC+NCG+LL+ T+LK+P+C +C +
Sbjct: 125 PYCPRDKMFLPDRFVVGTCPY--CGFEKAYGDQCDNCGRLLHPTELKNPRCSICGGPVEF 182
Query: 205 RDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLKWGVP 264
R + H F +LP L+ K+E+++ ++ N + LKEGLK R +TRD KWG+P
Sbjct: 183 RKSKHWFFNLPKLQEKVEKWLRESNLP----PNVKNYSLNMLKEGLKPRSVTRDNKWGIP 238
Query: 265 VPLERFKEKVFYVWFDAPIGYVSITSCYTNE------WEQWWKNPENVELYQFMGKDNVP 318
P + K YVWFDA +GY+S T Y + W+++W NPE +Y F+GKDN+P
Sbjct: 239 APFPGAEGKTIYVWFDALLGYISATKEYGLKKGDPELWKKYWFNPETKTVY-FIGKDNIP 297
Query: 319 FHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDTNIPVEVWR 378
FH ++ P+ L+G+G+ + L IS TEYL YE +FSKS+ G++ ++A + +P + WR
Sbjct: 298 FHAIILPAMLIGSGDPYVLPSYISATEYLMYEGEQFSKSRRWGIWIDEALEI-LPADYWR 356
Query: 379 YYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIVPDANG 438
+ L+ RPE DT FTW++ N E+ +++GN+++RVL FI +GS+VP+
Sbjct: 357 FALIRMRPEAKDTNFTWSEFLRIVNTEMNDDIGNYVHRVLRFIE----SKFGSVVPEPGS 412
Query: 439 -AESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLYKE 497
+++ + + + + E+Y E+V+LKQ L + ++ +GN YL W K
Sbjct: 413 YSDADKEFEKAIRETPRRAEKYF---EEVRLKQALGEVIELARKGNQYLNTKAPWDKIKT 469
Query: 498 DQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCDEKGDVDRARR 557
D + M +V V LA LL PF P + + K LNL H E G +A
Sbjct: 470 DPKDAATTMYLAVNSVATLAILLAPFTPDSAERLWKMLNLPGSVH-----EPGRWKQAGE 524
Query: 558 PWEIIPAGHKIGSPNPLFKEL 578
II GH+IG P LF++L
Sbjct: 525 --MIIKPGHRIGKPEQLFRKL 543
>sp|Q9YCY3|SYM_AERPE Methionine--tRNA ligase OS=Aeropyrum pernix (strain ATCC 700893 /
DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=metG PE=3
SV=1
Length = 572
Score = 418 bits (1075), Expect = e-116, Method: Compositional matrix adjust.
Identities = 219/567 (38%), Positives = 325/567 (57%), Gaps = 29/567 (5%)
Query: 25 LITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMEDN 84
++TSA PYVN+VPHLG +IGSVLSAD++AR+ RLRG +++ G+DE+GT E +A +
Sbjct: 5 VVTSAWPYVNHVPHLGTLIGSVLSADIYARYLRLRGRQVVFVSGSDEHGTPIELEARKKG 64
Query: 85 CSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQQ 144
PKE+ D+ H +++ + ISFDN+ RT +P E KKL +N ++
Sbjct: 65 VHPKELTDQVHEYDVKMWREYRISFDNYSRTESPVHKEFVMEFMKKLEENGYIFSQEEVL 124
Query: 145 PYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAPQI 204
PYC+ K FL DR VEGTCP+ C YE ARGDQC+ CG+LL+ T+LK+P+C +C + P
Sbjct: 125 PYCERDKIFLPDRFVEGTCPY--CGYEKARGDQCDECGRLLHPTELKNPRCALCGSKPVY 182
Query: 205 RDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLKWGVP 264
+ T H F+DL ++++L +++ + G + + + W+ +GLK R +TRDL WGVP
Sbjct: 183 KSTRHWFIDLRRVQDRLLKWLESH---GELQDSVKKYSINWVAQGLKPRSVTRDLSWGVP 239
Query: 265 VPLERFKEKVFYVWFDAPIGYVSITSCY-------TNEWEQWWKNPENVELYQFMGKDNV 317
P + + K YVWFDA +GYVS T EW+ WW + +Y F+GKDN+
Sbjct: 240 APFKGAEGKTIYVWFDALLGYVSATKELFIMRRGDPEEWKSWWWDSGTRTVY-FIGKDNI 298
Query: 318 PFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDTNIPVEVW 377
PFH ++ P+ L + + + L IS TEYL YE +FSKS+ IGV+ ++A + P + W
Sbjct: 299 PFHAIILPALFLASHDPYVLPWRISATEYLMYEGQQFSKSRRIGVWIDEALEIA-PADYW 357
Query: 378 RYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIVPDAN 437
R+ L RPE DT FTW + N EL +++GNF+NRVLS + + P+
Sbjct: 358 RWALARMRPEARDTNFTWKEFYRIVNTELNDDIGNFVNRVLSLVR----SRMSGVAPEPE 413
Query: 438 GAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLYKE 497
HQ E+V + E +E +++K+ + + I+ EGNAYL +Q WKL +
Sbjct: 414 DLGEHQ---GFVERVRRAAWAVAEDLEAIRIKRATEGILEIAREGNAYLNRTQPWKLLSQ 470
Query: 498 DQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCDEKGDVDRARR 557
D+ + ++ V LA LL PF P + + L L H ++ DE D R
Sbjct: 471 DREEGVRALSAALYAVKTLAHLLAPFTPDAADRLWSMLGLAGSVHEAVWDEWLD-----R 525
Query: 558 PWEIIPAGHKIGSPNPLFKELKDDEVE 584
P +P G +I PLF++L DD +E
Sbjct: 526 P---LPGGARIVRVEPLFQKLPDDFLE 549
>sp|Q0C161|SYM_HYPNA Methionine--tRNA ligase OS=Hyphomonas neptunium (strain ATCC 15444)
GN=metG PE=3 SV=1
Length = 579
Score = 417 bits (1072), Expect = e-115, Method: Compositional matrix adjust.
Identities = 232/591 (39%), Positives = 339/591 (57%), Gaps = 33/591 (5%)
Query: 21 KRNILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKA 80
+R ILITSALPY+N V HLGN+ GS+L ADV+AR RL+G++ YIC TDE+GT E A
Sbjct: 4 QRRILITSALPYINGVKHLGNLAGSMLPADVYARVMRLQGHDVTYICATDEHGTPAELAA 63
Query: 81 MEDNCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIEN 140
S + CD+ + + + + F++SFD FGRTS P Q + ++L N +
Sbjct: 64 QATGQSVQAYCDEQYEVQRKAGEGFNLSFDWFGRTSRPANHTLTQHLAQQLEKNGLIEVR 123
Query: 141 TMQQPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKV--C 198
T +Q Y RFL DR VEGTCP C YE ARGDQC+NCG+LL+ DL +P V
Sbjct: 124 TSKQVYAVDDGRFLPDRYVEGTCPH--CGYEKARGDQCDNCGRLLDPVDLINPYSAVSGS 181
Query: 199 RNAPQIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRD 258
RN +IRDT+HL+L +++++ +++N + +W A+ + WL EGL R I+RD
Sbjct: 182 RNI-EIRDTDHLYLLQTGMQDRIRDWVN--AKGKNWPSLAVSIANKWLDEGLIARSISRD 238
Query: 259 LKWGVPV------PLERFKEKVFYVWFDAPIGYVSITSCYT----NEWEQWW---KNPEN 305
L WGV V P F+ KVFYVWFDAPIGY+S T + N+WE+ W K +
Sbjct: 239 LSWGVKVTDADGNPRPGFENKVFYVWFDAPIGYISATQEWAEATGNDWEKLWLTDKGADQ 298
Query: 306 VELYQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGN 365
E QFMGKDNV FHTV FP TLLG+GE W + + ++ + GKFS S+ GVF +
Sbjct: 299 TEYVQFMGKDNVAFHTVSFPVTLLGSGEPWKTVDKLKAFNWVTWYGGKFSTSQKRGVFMD 358
Query: 366 DAKDTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPP 425
A +P + WR+YL++N PE SD FTW QA N++L N LGNFINR+ + A
Sbjct: 359 QALSL-LPSDYWRWYLISNAPEGSDAAFTWEGFQAAVNSDLANVLGNFINRITKYCASK- 416
Query: 426 GQGYGSIVPD--ANGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGN 483
+ +P+ +G + LAE++ + +E Y EAME ++ +I + GN
Sbjct: 417 ---FEGKIPETGTSGDAEAWMANELAERLPRLIEFY-EAME---FRKAAAETRAIWAAGN 469
Query: 484 AYLQESQFWKLYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHI 543
YL +++ W YK D ++ +R + L + + +P +P + ++ L + PE++
Sbjct: 470 EYLTKAEPWVKYKNDVDGAAVGVRAGINLAAIFGIIAQPIIPDAAKKILDALGI-PEENR 528
Query: 544 SLCDEKGDVDRARRPWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQ 594
+ D A + IP GH I P+ LF++++D +VE + ++F G +
Sbjct: 529 KMPAGSKPEDFAALL-DAIPRGHAISPPDVLFQKIEDSQVEEWTAQFGGGK 578
>sp|A6GVQ2|SYM_FLAPJ Methionine--tRNA ligase OS=Flavobacterium psychrophilum (strain
JIP02/86 / ATCC 49511) GN=metG PE=3 SV=1
Length = 686
Score = 416 bits (1069), Expect = e-115, Method: Compositional matrix adjust.
Identities = 253/732 (34%), Positives = 380/732 (51%), Gaps = 70/732 (9%)
Query: 18 IPGKRNILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATE 77
I + IT+ALPY N H+G++ G + +D+++R+ RL+G + ++CG+DE+G A
Sbjct: 2 IQNPKRYTITAALPYTNGPIHIGHLAGVYMPSDIYSRYLRLQGKDVAFMCGSDEHGVAIS 61
Query: 78 TKAMEDNCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWL 137
KA ++ +P+E+ DKY I + + F ISFDN+ RTS + FKKL D
Sbjct: 62 MKAKKEGITPQEVIDKYDGIIRKSFVDFGISFDNYSRTSAKIHHDTASEFFKKLYDKGDF 121
Query: 138 IENTMQQPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKV 197
IE +Q Y +FLADR V GTCP C E A GDQCE CG LNATDL +PK +
Sbjct: 122 IEEVTEQLYDAKADQFLADRFVVGTCP--KCGNEEAYGDQCEKCGSTLNATDLINPKSTI 179
Query: 198 CRNAPQIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITR 257
P ++ T H FL L + L ++I W N +W+ GL+ R +TR
Sbjct: 180 TGETPIMKSTKHWFLPLDRYSDFLTKWILE-GHKSDWKPNVYGQVKSWIDGGLEPRAVTR 238
Query: 258 DLKWGVPVPLERFKEKVFYVWFDAPIGYVSITSCYT----NEWEQWWKNPENVELYQFMG 313
DL WG+ VP+ + K YVWFDAPIGY+S T + +WE +WKN E+ +L F+G
Sbjct: 239 DLDWGIDVPVAGAEGKKLYVWFDAPIGYISATKEWAAREGKDWELYWKN-EDTKLVHFIG 297
Query: 314 KDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGND-AKDTNI 372
KDN+ FH ++FP+ L G ++ L + E+LN E K S SK V+ ++ +D
Sbjct: 298 KDNIVFHCIIFPAMLKAEG-SYILPDNVPANEFLNLEGNKLSTSKNWAVWLHEYLEDFPN 356
Query: 373 PVEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSI 432
+V RY L N PE D FTW D QA++NNEL GNFINRV+ K Y +
Sbjct: 357 QQDVLRYALTANAPESKDNDFTWKDFQARNNNELAAIFGNFINRVVVLTNKY----YEGV 412
Query: 433 VPDANGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFW 492
VP N + ++ + ++ Y ++E+ + ++ L M+++ GN YL + + W
Sbjct: 413 VPTPN--KFSEVDEATLTELKAYPAVISSSIERYRFREALGELMNVARLGNKYLADEEPW 470
Query: 493 KLYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCDEKGDV 552
K+ K D M ++ + L L EPF+P + ++NK L + + +S D +
Sbjct: 471 KMVKTDPERVKTQMYVALQIATALRVLCEPFLPFTAEKLNKMLKI--DAKLSWNDVTTNS 528
Query: 553 DRARRPWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQADRIIRAEAEAAKTAEQL 612
D +I AGHKIG LF +++D++++ Q D++ EA KTA
Sbjct: 529 D-------LILAGHKIGEGEILFAQIEDEQIQ--------KQIDKL-----EATKTANIA 568
Query: 613 KKTKISVDGGGKKQKSAKSTAGAKSKTTAEPEISI------ARLDIRVGKITKVQKHPDA 666
+ K AEP+ + A++D+RVG I + +K P A
Sbjct: 569 ENKK------------------------AEPQKELIQYDDFAKMDLRVGTIIEAEKMPKA 604
Query: 667 DALYVEEIDVGEVQPRTVVSGLVKHIPLEEMQERMVCVLCNLKPVAMRGIKSHAMVLCAS 726
+ L V ++D G + RT+VSG+ + EE+ + V VL NL P A+RGI+S M+L +
Sbjct: 605 NKLLVLKVDTG-IDVRTIVSGIAESFSPEEIIGKQVTVLVNLAPRALRGIESQGMILMTN 663
Query: 727 TSDNTKVELVEP 738
D K+ V P
Sbjct: 664 LPDG-KLAFVNP 674
>sp|Q64MP7|SYM_BACFR Methionine--tRNA ligase OS=Bacteroides fragilis (strain YCH46)
GN=metG PE=3 SV=2
Length = 679
Score = 416 bits (1069), Expect = e-115, Method: Compositional matrix adjust.
Identities = 251/727 (34%), Positives = 379/727 (52%), Gaps = 62/727 (8%)
Query: 26 ITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMEDNC 85
+TSALPY N H+G++ G + AD++ R+ RL+ + ++I G+DE+G +A ++
Sbjct: 10 VTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITIRAKKEGI 69
Query: 86 SPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQQP 145
+P+++ D+YH + K ++ F ISFD + RTS+ E FKKL + IE T +Q
Sbjct: 70 TPQDVVDRYHFLIKKSFEEFGISFDVYSRTSSKTHHELASDFFKKLYEKGEFIEKTSEQY 129
Query: 146 YCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAPQIR 205
Y + +FLADR + G CP C+ E A GDQCE CG L+ TDL +PK + + P ++
Sbjct: 130 YDEEAHQFLADRYITGECPH--CHSEGAYGDQCEKCGTSLSPTDLINPKSAISGSKPVMK 187
Query: 206 DTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLKWGVPV 265
+T H +L L L ++I + W N +WL GL+ R ++RDL WG+PV
Sbjct: 188 ETKHWYLPLDKHETWLRQWI--LEEHKEWRPNVYGQCKSWLDMGLQPRAVSRDLDWGIPV 245
Query: 266 PLERFKEKVFYVWFDAPIGYVSIT-SCYTNEWEQWWKNPENVELYQFMGKDNVPFHTVMF 324
P+E + KV YVWFDAPIGY+S T + WE WWK+PE L F+GKDN+ FH ++F
Sbjct: 246 PVEGAEGKVLYVWFDAPIGYISNTKELLPDSWETWWKDPE-TRLVHFIGKDNIVFHCIVF 304
Query: 325 PSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGND-AKDTNIPVEVWRYYLLT 383
P+ L G ++ L + E+LN E K S S+ V+ ++ +D +V RY L
Sbjct: 305 PAMLKAEG-SYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLEDFPGKQDVLRYVLTA 363
Query: 384 NRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIVPDANGAESHQ 443
N PE D FTW D QA++NNEL+ GNF+NR + K + VP A G +
Sbjct: 364 NAPETKDNDFTWKDFQARNNNELVAVYGNFVNRAMVLTQK----YFEGKVP-AAGELTDY 418
Query: 444 LTKTLAE--KVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLYKEDQPS 501
+TL E V VE+ L K + K AM+++ GN YL +++ WKL K D
Sbjct: 419 DKETLKEFSDVKAEVEKLLNVF---KFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMER 475
Query: 502 CSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCDEKGDVDRARRPWEI 561
++ S+ LV LA EPF+P S + + LN+ L ++
Sbjct: 476 VGTILNISLQLVANLAIAFEPFLPFSSERLRQMLNMDSFDWAELGRN-----------DL 524
Query: 562 IPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQADRIIRAEAEAAKTAEQLKKTKISVDG 621
+PAGH++ P LF++++D +E K ++ +A EA A+ ++ I D
Sbjct: 525 LPAGHQLNKPELLFEKIEDATIEAQVQKLLDTK-----KANEEANYKAKPIR-ANIEFD- 577
Query: 622 GGKKQKSAKSTAGAKSKTTAEPEISIARLDIRVGKITKVQKHPDADALYVEEIDVGEVQP 681
+LDIRVG + + QK P AD L +ID G ++
Sbjct: 578 ------------------------DFMKLDIRVGTVLECQKVPKADKLLQFKIDDG-LET 612
Query: 682 RTVVSGLVKHIPLEEMQERMVCVLCNLKPVAMRGIKSHAMVLCASTSDNTKVELVEPPKS 741
RT+VSG+ +H EE+ + VC + NL P ++GI S M+L A +D + + +V P +
Sbjct: 613 RTIVSGIAQHYKPEELVGKQVCFIANLAPRKLKGIVSEGMILSAENNDGS-LAVVMPGRE 671
Query: 742 AKIGERV 748
K G V
Sbjct: 672 VKPGSEV 678
>sp|Q8A3M1|SYM_BACTN Methionine--tRNA ligase OS=Bacteroides thetaiotaomicron (strain
ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482)
GN=metG PE=3 SV=1
Length = 679
Score = 416 bits (1068), Expect = e-115, Method: Compositional matrix adjust.
Identities = 247/725 (34%), Positives = 379/725 (52%), Gaps = 58/725 (8%)
Query: 26 ITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMEDNC 85
+TSALPY N H+G++ G + AD++ R+ RL+ + ++I G+DE+G +A ++
Sbjct: 10 VTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITIRAKKEGV 69
Query: 86 SPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQQP 145
+P+++ D+YH + K ++ F +SFD + RT++ E FK L + IE T +Q
Sbjct: 70 TPQDVVDRYHYLIKKSFEEFGVSFDVYSRTTSKTHHELASDFFKTLYNKGEFIEKTSEQY 129
Query: 146 YCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAPQIR 205
Y + K FLADR + G CP C+ E A GDQCE CG L+ TDL +PK + + P ++
Sbjct: 130 YDEEAKTFLADRYITGECPH--CHSEGAYGDQCEKCGTSLSPTDLINPKSAISGSKPVMK 187
Query: 206 DTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLKWGVPV 265
+T H +L L L ++I + W N +WL GL+ R ++RDL WG+PV
Sbjct: 188 ETKHWYLPLDKHEGWLRQWI--LEDHKEWRPNVYGQCKSWLDMGLQPRAVSRDLDWGIPV 245
Query: 266 PLERFKEKVFYVWFDAPIGYVSIT-SCYTNEWEQWWKNPENVELYQFMGKDNVPFHTVMF 324
P+E + KV YVWFDAPIGY+S T + WE WWK+PE L F+GKDN+ FH ++F
Sbjct: 246 PVEGAEGKVLYVWFDAPIGYISNTKELLPDSWETWWKDPE-TRLLHFIGKDNIVFHCIVF 304
Query: 325 PSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGND-AKDTNIPVEVWRYYLLT 383
P+ L G ++ L + E+LN E K S S+ V+ ++ +D +V RY L
Sbjct: 305 PAMLKAEG-SYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLEDFPGKQDVLRYVLTA 363
Query: 384 NRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIVPDANGAESHQ 443
N PE D FTW D QA++NNEL+ GNF+NR + K + S VP AE
Sbjct: 364 NAPETKDNDFTWKDFQARNNNELVAVYGNFVNRAMVLTQK----YFDSKVPAC--AELTD 417
Query: 444 LTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLYKEDQPSCS 503
K ++ + + ++ K + K AM+++ GN YL +++ WKL K D
Sbjct: 418 YDKETLKEFANVKAEVEKLLDVFKFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMERVG 477
Query: 504 IVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCDEKGDVDRARRPWEIIP 563
++ S+ LV LA EPF+P S ++ K LN++ E ++ R +++P
Sbjct: 478 TILNISLQLVANLAIAFEPFLPFSSEKLRKMLNME-------SFEWSELGRN----DLLP 526
Query: 564 AGHKIGSPNPLFKELKDDEVEFFRSKFAGSQADRIIRAEAEAAKTAEQLKKTKISVDGGG 623
GH++ P LF++++D +E K ++ +A EA A ++ I D
Sbjct: 527 VGHQLNKPELLFEKIEDSVIEAQVQKLLDTK-----KANEEANYKANPIRPN-IEFD--- 577
Query: 624 KKQKSAKSTAGAKSKTTAEPEISIARLDIRVGKITKVQKHPDADALYVEEIDVGEVQPRT 683
+LDIRVG I + QK P AD L +ID G ++ RT
Sbjct: 578 ----------------------DFTKLDIRVGTILECQKVPKADKLLQFKIDDG-LETRT 614
Query: 684 VVSGLVKHIPLEEMQERMVCVLCNLKPVAMRGIKSHAMVLCASTSDNTKVELVEPPKSAK 743
+VSG+ KH EE+ + VC + NL P ++GI S M+L A +D + + ++ P K K
Sbjct: 615 IVSGIAKHYQPEELVGKQVCFIANLAPRKLKGIVSEGMILSAENNDGS-LAVIMPQKEVK 673
Query: 744 IGERV 748
G V
Sbjct: 674 PGSEV 678
>sp|A5FLM7|SYM_FLAJ1 Methionine--tRNA ligase OS=Flavobacterium johnsoniae (strain ATCC
17061 / DSM 2064 / UW101) GN=metG PE=3 SV=1
Length = 711
Score = 415 bits (1067), Expect = e-115, Method: Compositional matrix adjust.
Identities = 251/751 (33%), Positives = 390/751 (51%), Gaps = 78/751 (10%)
Query: 26 ITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMEDNC 85
IT+ALPY N H+G++ G + AD+++R+ RL+G + +ICG+DE+G A KA ++
Sbjct: 10 ITAALPYTNGPIHIGHLAGVYVPADIYSRYLRLQGKDVAFICGSDEHGVAISMKAKKEGV 69
Query: 86 SPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQQP 145
+P+E+ DKY I + + F ISF+N+ RTS + F+ L D IE +Q
Sbjct: 70 TPQEVIDKYDGIIRKSFADFGISFNNYSRTSAKIHHDTASEFFRTLYDKGDFIEEVTEQL 129
Query: 146 YCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAPQIR 205
Y +FLADR V GTCP C+ A GDQCE CG LNATDL +PK + P ++
Sbjct: 130 YDAKANQFLADRFVVGTCP--KCDNPEAYGDQCEKCGSTLNATDLINPKSTITGETPILK 187
Query: 206 DTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLKWGVPV 265
+T H FL L + L ++I W N +W+ GL+ R +TRDL WG+ V
Sbjct: 188 ETKHWFLPLDRYSDFLTKWILE-GHKNDWKPNVYGQVKSWIDGGLEPRAVTRDLDWGIDV 246
Query: 266 PLERFKEKVFYVWFDAPIGYVSITSCYT----NEWEQWWKNPENVELYQFMGKDNVPFHT 321
P+E + K YVWFDAPIGY+S T + +WE +WK+ E +L F+GKDN+ FH
Sbjct: 247 PVEGAEGKKLYVWFDAPIGYISSTKEWAAREGKDWEPYWKD-EETKLVHFIGKDNIVFHC 305
Query: 322 VMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGND-AKDTNIPVEVWRYY 380
++FP+ L G ++ L + E+LN E K S SK V+ ++ ++ +V RY
Sbjct: 306 IIFPAMLKAEG-SYILPDNVPANEFLNLEGNKLSTSKNWAVWLHEYLEEFPDKQDVLRYA 364
Query: 381 LLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIVPDANGAE 440
L +N PE D FTW D QA++NNEL+ GNF+NRV+ K Y ++P N E
Sbjct: 365 LTSNAPETKDNDFTWKDFQARNNNELVAIFGNFVNRVVVLTNK----YYDGVIPTPN--E 418
Query: 441 SHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLYKEDQP 500
++ + ++ Y ++E+ + ++ L M+++ GN YL + + WK+ K++
Sbjct: 419 FTEIDEQTLAELKAYPAVISSSVERYRFREALGELMNVARLGNKYLADEEPWKVMKDNPE 478
Query: 501 SCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQ-------------PEKHIS--- 544
M ++ + L+ L EPF+P + +++K LNL E+H
Sbjct: 479 RVKTQMYVALQIAAALSVLAEPFLPFTAAKLSKILNLGDLKEHFEGFSKFLKERHQDAND 538
Query: 545 -LCDEKGDVDRARRPWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQADRIIRAEA 603
+ D+ + ++IPAGHKIG LF +++D+E++ Q D++
Sbjct: 539 IIIDKTLGWNDISENSDLIPAGHKIGEAELLFAKIEDEEIQ--------KQIDKL----- 585
Query: 604 EAAKTAEQLKKTKISVDGGGKKQKSAKSTAGAKSKTTAEPEISI------ARLDIRVGKI 657
EA KTA + K AEP+ + A++DIR+G I
Sbjct: 586 EATKTANIAENQK------------------------AEPQKDLIQFEDFAKMDIRIGTI 621
Query: 658 TKVQKHPDADALYVEEIDVGEVQPRTVVSGLVKHIPLEEMQERMVCVLCNLKPVAMRGIK 717
+ +K P A+ L V ++D G + RT+VSG+ + EE+ + V VL NL P A+RG++
Sbjct: 622 LEAEKMPKANKLLVLKVDTG-IDVRTIVSGIAESFSPEEIIGKRVSVLANLAPRALRGVE 680
Query: 718 SHAMVLCASTSDNTKVELVEPPKSAKIGERV 748
S M+L + ++ K+ V P A G V
Sbjct: 681 SQGMILMTTNAEG-KLVFVNPDADAPNGATV 710
>sp|Q5L7I8|SYM_BACFN Methionine--tRNA ligase OS=Bacteroides fragilis (strain ATCC 25285
/ NCTC 9343) GN=metG PE=3 SV=1
Length = 679
Score = 414 bits (1065), Expect = e-114, Method: Compositional matrix adjust.
Identities = 250/727 (34%), Positives = 378/727 (51%), Gaps = 62/727 (8%)
Query: 26 ITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMEDNC 85
+TSALPY N H+G++ G + AD++ R+ RL+ + ++I G+DE+G +A ++
Sbjct: 10 VTSALPYANGPVHIGHLAGVYVPADIYVRYLRLKKEDVLFIGGSDEHGVPITIRAKKEGI 69
Query: 86 SPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQQP 145
+P+++ D+YH + K ++ F ISFD + RTS+ E FKKL + IE T +Q
Sbjct: 70 TPQDVVDRYHFLIKKSFEEFGISFDVYSRTSSKTHHELASDFFKKLYEKGEFIEKTSEQY 129
Query: 146 YCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAPQIR 205
Y + +FLADR + G CP C+ E A GDQCE CG L+ TDL +PK + + P ++
Sbjct: 130 YDEEAHQFLADRYITGECPH--CHSEGAYGDQCEKCGTSLSPTDLINPKSAISGSKPVMK 187
Query: 206 DTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLKWGVPV 265
+T H +L L L ++I + W N +WL GL+ R ++RDL WG+PV
Sbjct: 188 ETKHWYLPLDKHETWLRQWI--LEEHKEWRPNVYGQCKSWLDMGLQPRAVSRDLDWGIPV 245
Query: 266 PLERFKEKVFYVWFDAPIGYVSIT-SCYTNEWEQWWKNPENVELYQFMGKDNVPFHTVMF 324
P+E + KV YVWFDAPIGY+S T + WE WWK+PE L F+GKDN+ FH ++F
Sbjct: 246 PVEGAEGKVLYVWFDAPIGYISNTKELLPDSWETWWKDPE-TRLVHFIGKDNIVFHCIVF 304
Query: 325 PSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGND-AKDTNIPVEVWRYYLLT 383
P+ L G ++ L + E+LN E K S S+ V+ ++ +D +V RY L
Sbjct: 305 PAMLKAEG-SYILPDNVPSNEFLNLEGDKISTSRNWAVWLHEYLEDFPGKQDVLRYVLTA 363
Query: 384 NRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIVPDANGAESHQ 443
N PE D FTW D QA++NNEL+ GNF+NR + K + VP A +
Sbjct: 364 NAPETKDNDFTWKDFQARNNNELVAVYGNFVNRAMVLTQK----YFEGKVPAAGELIDYD 419
Query: 444 LTKTLAE--KVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLYKEDQPS 501
+TL E V VE+ L K + K AM+++ GN YL +++ WKL K D
Sbjct: 420 -KETLKEFSDVKAEVEKLLNVF---KFRDAQKEAMNLARIGNKYLADTEPWKLAKTDMER 475
Query: 502 CSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCDEKGDVDRARRPWEI 561
++ S+ LV LA EPF+P S + + LN+ L ++
Sbjct: 476 VGTILNISLQLVANLAIAFEPFLPFSSERLRQMLNMDSFDWAELGRN-----------DL 524
Query: 562 IPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQADRIIRAEAEAAKTAEQLKKTKISVDG 621
+PAGH++ P LF++++D +E K ++ +A EA A+ ++ I D
Sbjct: 525 LPAGHQLNKPELLFEKIEDATIEAQVQKLLDTK-----KANEEANYKAKPIR-ANIEFD- 577
Query: 622 GGKKQKSAKSTAGAKSKTTAEPEISIARLDIRVGKITKVQKHPDADALYVEEIDVGEVQP 681
+LDIRVG + + QK P AD L +ID G ++
Sbjct: 578 ------------------------DFMKLDIRVGTVLECQKVPKADKLLQFKIDDG-LET 612
Query: 682 RTVVSGLVKHIPLEEMQERMVCVLCNLKPVAMRGIKSHAMVLCASTSDNTKVELVEPPKS 741
RT+VSG+ +H EE+ + VC + NL P ++GI S M+L A +D + + +V P +
Sbjct: 613 RTIVSGIAQHYKPEELVGKQVCFIANLAPRKLKGIVSEGMILSAENNDGS-LAVVMPGRE 671
Query: 742 AKIGERV 748
K G V
Sbjct: 672 VKPGSEV 678
>sp|Q3J0T3|SYM_RHOS4 Methionine--tRNA ligase OS=Rhodobacter sphaeroides (strain ATCC
17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=metG PE=3 SV=1
Length = 572
Score = 413 bits (1062), Expect = e-114, Method: Compositional matrix adjust.
Identities = 226/595 (37%), Positives = 342/595 (57%), Gaps = 49/595 (8%)
Query: 24 ILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMED 83
ILITSA+PY+N + HLGN++GS L AD++AR+ R RG+ ++IC TDE+GT E A +
Sbjct: 4 ILITSAIPYINGIKHLGNLVGSQLPADLYARYMRGRGHEVMFICATDEHGTPAELAAAKA 63
Query: 84 NCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQ 143
++ C + H + K++ F +SFD+FGR+S+ + Q L +N ++ E +
Sbjct: 64 GKPVEDYCAEMHEVQKEIAAGFRLSFDHFGRSSSARNHRLTQHFAGALAENGFIEEVVER 123
Query: 144 QPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAP- 202
Q + RFL DR +EGTCP C Y+ ARGDQCENC K L+ TDL DP+ + +
Sbjct: 124 QFFSVADNRFLPDRYIEGTCP--NCGYDKARGDQCENCTKQLDPTDLIDPRSAISGSTEL 181
Query: 203 QIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLK--EGLKVRCITRDLK 260
++R+T HL+L AL++++E +I++ + W WL EGL+ R ITRDLK
Sbjct: 182 ELRETKHLYLRQRALKDEIEAWIDSKT---DWPVLTTSIAKKWLHDGEGLQDRGITRDLK 238
Query: 261 WGVPV-----PLERFKEKVFYVWFDAPIGYVSITSCYTN-------EWEQWW---KNPEN 305
WGVPV P + KVFYVWFDAPI Y++ T+ + + +WE+WW + E+
Sbjct: 239 WGVPVRKGSEPWPGMEGKVFYVWFDAPIEYIAGTAEWADANGKADADWERWWRTDRGAED 298
Query: 306 VELYQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGN 365
V QFMGKDNVPFHT+ FP+T++G+ E W L+ I YLNY+ G+FS S+G GVF +
Sbjct: 299 VRYVQFMGKDNVPFHTLSFPATIMGSREPWKLVDYIKSFNYLNYDGGQFSTSQGRGVFMD 358
Query: 366 DAKDTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPP 425
A +P + WR++LL++ PE SD+ FTW + Q+ N +L + LGN ++RV F
Sbjct: 359 QALSI-LPADYWRWWLLSHAPENSDSEFTWENFQSSVNKDLADVLGNLVSRVTKFCRSK- 416
Query: 426 GQGYGSIVPDAN--GAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGN 483
+G VP G HQL L +++ Y E +EAME K L+ ++ GN
Sbjct: 417 ---FGETVPAGGSPGEREHQLVAELQQRLAAY-EACMEAMEVRKAASELR---ALWVAGN 469
Query: 484 AYLQESQFWKLYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHI 543
YLQ + W + K D ++R ++ L+ L A + PF+P + + L
Sbjct: 470 EYLQSAAPWTVVKTDPEQAQAMIRLALNLIRLYAVISRPFIPDAAASMMASLG------- 522
Query: 544 SLCDE---KGDVDRARRPWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQA 595
C++ DV RA E++PAGH +P LF+++ D+E ++++F+G ++
Sbjct: 523 --CEDWSWPADVGRAL---EVLPAGHGFTTPEVLFRKITDEERAEWQTRFSGVRS 572
>sp|A3PLG8|SYM_RHOS1 Methionine--tRNA ligase OS=Rhodobacter sphaeroides (strain ATCC
17029 / ATH 2.4.9) GN=metG PE=3 SV=1
Length = 572
Score = 413 bits (1062), Expect = e-114, Method: Compositional matrix adjust.
Identities = 226/595 (37%), Positives = 342/595 (57%), Gaps = 49/595 (8%)
Query: 24 ILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMED 83
ILITSA+PY+N + HLGN++GS L AD++AR+ R RG+ ++IC TDE+GT E A +
Sbjct: 4 ILITSAIPYINGIKHLGNLVGSQLPADLYARYMRGRGHEVMFICATDEHGTPAELAAAKA 63
Query: 84 NCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQ 143
++ C + H + K++ F +SFD+FGR+S+ + Q L +N ++ E +
Sbjct: 64 GKPVEDYCAEMHEVQKEIAAGFRLSFDHFGRSSSARNHRLTQHFAGALAENGFIEEVVER 123
Query: 144 QPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAP- 202
Q + RFL DR +EGTCP C Y+ ARGDQCENC K L+ TDL DP+ + +
Sbjct: 124 QFFSVADNRFLPDRYIEGTCP--NCGYDKARGDQCENCTKQLDPTDLIDPRSAISGSTEL 181
Query: 203 QIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLK--EGLKVRCITRDLK 260
++R+T HL+L AL++++E +I++ + W WL EGL+ R ITRDLK
Sbjct: 182 ELRETKHLYLRQRALKDEIEAWIDSKT---DWPVLTTSIAKKWLHDGEGLQDRGITRDLK 238
Query: 261 WGVPV-----PLERFKEKVFYVWFDAPIGYVSITSCYTN-------EWEQWW---KNPEN 305
WGVPV P + KVFYVWFDAPI Y++ T+ + + +WE+WW + E+
Sbjct: 239 WGVPVRKGSEPWPGMEGKVFYVWFDAPIEYIAGTAEWADANGKTDADWERWWRTDRGAED 298
Query: 306 VELYQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGN 365
V QFMGKDNVPFHT+ FP+T++G+ E W L+ I YLNY+ G+FS S+G GVF +
Sbjct: 299 VRYVQFMGKDNVPFHTLSFPATIMGSREPWKLVDYIKSFNYLNYDGGQFSTSQGRGVFMD 358
Query: 366 DAKDTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPP 425
A +P + WR++LL++ PE SD+ FTW + Q+ N +L + LGN ++RV F
Sbjct: 359 QALSI-LPADYWRWWLLSHAPENSDSEFTWENFQSSVNKDLADVLGNLVSRVTKFCRSK- 416
Query: 426 GQGYGSIVPDAN--GAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGN 483
+G VP G HQL L +++ Y E +EAME K L+ ++ GN
Sbjct: 417 ---FGETVPAGGSPGEREHQLVAELQQRLAAY-EACMEAMEVRKAASELR---ALWVAGN 469
Query: 484 AYLQESQFWKLYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHI 543
YLQ + W + K D ++R ++ L+ L A + PF+P + + L
Sbjct: 470 EYLQSAAPWTVVKTDPEQAQAMIRLALNLIRLYAVISRPFIPDAAASMMTSLG------- 522
Query: 544 SLCDE---KGDVDRARRPWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQA 595
C++ DV RA E++PAGH +P LF+++ D+E ++++F+G ++
Sbjct: 523 --CEDWSWPADVGRAL---EVLPAGHGFTTPEVLFRKITDEERAEWQTRFSGVRS 572
>sp|A4WV24|SYM_RHOS5 Methionine--tRNA ligase OS=Rhodobacter sphaeroides (strain ATCC
17025 / ATH 2.4.3) GN=metG PE=3 SV=1
Length = 572
Score = 410 bits (1055), Expect = e-113, Method: Compositional matrix adjust.
Identities = 227/589 (38%), Positives = 335/589 (56%), Gaps = 43/589 (7%)
Query: 24 ILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMED 83
ILITSA+PY+N + HLGN++GS L AD++AR+ R RG+ ++IC TDE+GT E A +
Sbjct: 4 ILITSAIPYINGIKHLGNLVGSQLPADLYARYMRGRGHEVMFICATDEHGTPAELAAAKA 63
Query: 84 NCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQ 143
+ C + H I K++ F +SFD+FGR+S+ + Q +L +N ++ E + +
Sbjct: 64 GKPVEVYCAEMHEIQKEIAAGFRLSFDHFGRSSSARNHRLTQHFAGQLAENGFIEEVSER 123
Query: 144 QPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAP- 202
Q + RFL DR +EGTCP C Y+ ARGDQCENC K L+ TDL +P+ + +
Sbjct: 124 QVFSVADNRFLPDRYIEGTCP--NCGYDKARGDQCENCTKQLDPTDLINPRSAISGSTDL 181
Query: 203 QIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLK--EGLKVRCITRDLK 260
++R+T HL+L AL++++E +I++ + W WL EGL+ R ITRDL
Sbjct: 182 EVRETKHLYLRQRALKDEIEAWIDSKT---DWPVLTTSIAKKWLHDGEGLQDRGITRDLH 238
Query: 261 WGVPV-----PLERFKEKVFYVWFDAPIGYVSITSCYTN-------EWEQWW---KNPEN 305
WGVPV P + KVFYVWFDAPI Y++ T+ + + +WE+WW K +
Sbjct: 239 WGVPVKKGDQPWPGMEGKVFYVWFDAPIEYIAGTAEWADANGKTEADWERWWRTDKGAGD 298
Query: 306 VELYQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGN 365
V QFMGKDNVPFHT+ FP+T++G+ E W L+ I YLNY+ G+FS S+G GVF +
Sbjct: 299 VRYVQFMGKDNVPFHTLSFPATIMGSREPWKLVDYIKSFNYLNYDGGQFSTSQGRGVFMD 358
Query: 366 DAKDTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPP 425
A +P + WR++LL++ PE SD+ FTW + QA N +L + LGN ++RV F
Sbjct: 359 QALSI-LPADYWRWWLLSHAPENSDSEFTWENFQASVNKDLADVLGNLVSRVTKFCRSK- 416
Query: 426 GQGYGSIVP--DANGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGN 483
+G VP A G HQL L E++ Y E +EAME K L+ ++ GN
Sbjct: 417 ---FGETVPAGGAFGEREHQLIAELQERLAAY-ESCMEAMEIRKAATELR---ALWVAGN 469
Query: 484 AYLQESQFWKLYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHI 543
YLQ + W + K D ++R S+ L+ L A + PF+P + L
Sbjct: 470 EYLQSAAPWTVVKTDPERAQAMIRLSLNLIRLYAVISRPFIPDAAASTMASLG------- 522
Query: 544 SLCDEKGDVDRARRPWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAG 592
CD+ E +PAGH +P+ LF+++ D+E ++++FAG
Sbjct: 523 --CDDWSWPTDVAAALERLPAGHAFTTPDVLFRKITDEERAEWQTRFAG 569
>sp|B9KKH3|SYM_RHOSK Methionine--tRNA ligase OS=Rhodobacter sphaeroides (strain KD131 /
KCTC 12085) GN=metG PE=3 SV=1
Length = 572
Score = 410 bits (1054), Expect = e-113, Method: Compositional matrix adjust.
Identities = 225/592 (38%), Positives = 339/592 (57%), Gaps = 49/592 (8%)
Query: 24 ILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMED 83
ILITSA+PY+N + HLGN++GS L AD++AR+ R RG+ ++IC TDE+GT E A +
Sbjct: 4 ILITSAIPYINGIKHLGNLVGSQLPADLYARYMRGRGHEVMFICATDEHGTPAELAAAKA 63
Query: 84 NCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQ 143
++ C + H + K++ F +SFD+FGR+S+ + Q L +N ++ E +
Sbjct: 64 GKPVEDYCAEMHEVQKEIAAGFRLSFDHFGRSSSARNHRLTQHFAGALAENGFIEEVVER 123
Query: 144 QPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAP- 202
Q + RFL DR +EGTCP C Y+ ARGDQCENC K L+ TDL DP+ + +
Sbjct: 124 QFFSVADNRFLPDRYIEGTCP--NCGYDKARGDQCENCTKQLDPTDLIDPRSAISGSTEL 181
Query: 203 QIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLK--EGLKVRCITRDLK 260
++R+T HL+L AL++++E +I++ + W WL EGL+ R ITRDLK
Sbjct: 182 ELRETKHLYLRQRALKDEIEAWIDSKT---DWPVLTTSIAKKWLHDGEGLQDRGITRDLK 238
Query: 261 WGVPV-----PLERFKEKVFYVWFDAPIGYVSITSCYTN-------EWEQWW---KNPEN 305
WGVPV P + KVFYVWFDAPI Y++ T+ + + +WE+WW + E+
Sbjct: 239 WGVPVRKGSEPWPGMEGKVFYVWFDAPIEYIAGTAEWADANGKADADWERWWRTDRGAED 298
Query: 306 VELYQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGN 365
V QFMGKDNVPFHT+ FP+T++G+ E W L+ I YLNY+ G+FS S+G GVF +
Sbjct: 299 VRYVQFMGKDNVPFHTLSFPATIMGSREPWKLVDYIKSFNYLNYDGGQFSTSQGRGVFMD 358
Query: 366 DAKDTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPP 425
A +P + WR++LL++ PE SD+ FTW + Q+ N +L + LGN ++RV F
Sbjct: 359 QALSI-LPADYWRWWLLSHAPENSDSEFTWENFQSSVNKDLADVLGNLVSRVTKFCRSK- 416
Query: 426 GQGYGSIVPDAN--GAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGN 483
+G VP G HQL L +++ Y E +EAME K L+ ++ GN
Sbjct: 417 ---FGETVPAGGSPGEREHQLVAELQQQLAAY-ETCMEAMEVRKAAAELR---ALWVAGN 469
Query: 484 AYLQESQFWKLYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHI 543
YLQ + W + K D ++R ++ L+ L A + PF+P + + L
Sbjct: 470 EYLQSAAPWTVVKTDPEQAQAMIRLALNLIRLYAVISRPFIPDAAASMMASLG------- 522
Query: 544 SLCDE---KGDVDRARRPWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAG 592
C++ DV RA E++P GH +P LF+++ D+E ++++F+G
Sbjct: 523 --CEDWSWPADVGRAL---EVLPPGHGFTTPEVLFRKITDEERAEWQTRFSG 569
>sp|A8LIJ9|SYM_DINSH Methionine--tRNA ligase OS=Dinoroseobacter shibae (strain DFL 12)
GN=metG PE=3 SV=1
Length = 572
Score = 410 bits (1054), Expect = e-113, Method: Compositional matrix adjust.
Identities = 228/591 (38%), Positives = 332/591 (56%), Gaps = 43/591 (7%)
Query: 24 ILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMED 83
ILITSA+PY+N + HLGN++GS L AD++AR+ R RG+ ++IC TDE+GT E A +
Sbjct: 4 ILITSAIPYINGIKHLGNLVGSQLPADLYARYARARGHEVMFICATDEHGTPAELAAAKA 63
Query: 84 NCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQ 143
E C + H + D+ K F +SFD+FGR+S+ + Q KL +N + E + +
Sbjct: 64 GKPVAEYCAEMHAVQSDIAKRFGLSFDHFGRSSSERNKALTQYFAGKLAENGLIEEVSEK 123
Query: 144 QPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAP- 202
Q Y RFL DR +EGTCP C Y+ ARGDQCENC K L+ TDL DP+ + +
Sbjct: 124 QVYSHADGRFLPDRYIEGTCP--NCGYDKARGDQCENCTKQLDPTDLIDPRSAISGSTDL 181
Query: 203 QIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLK--EGLKVRCITRDLK 260
++R+T HL+L AL+++L+ +I++ + W WL +GL+ R ITRDL
Sbjct: 182 EVRETKHLYLRQSALKDQLDAWIDSKT---DWPILTTSIAKKWLHDGDGLQDRGITRDLD 238
Query: 261 WGVPVP-----LERFKEKVFYVWFDAPIGYVSITSCYTN-------EWEQWW---KNPEN 305
WGVPV + KVFYVWFDAPI Y++ T+ + + WE+WW K +
Sbjct: 239 WGVPVKKGTEDWPGMEGKVFYVWFDAPIEYIAGTAEWADANGLDDAAWERWWRTDKGADE 298
Query: 306 VELYQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGN 365
V QFMGKDNVPFHT+ FP+T++G+G+ W L+ I YL Y+ G+FS S+G GVF +
Sbjct: 299 VRYVQFMGKDNVPFHTLSFPATIMGSGDPWKLVDYIKSFNYLTYDGGQFSTSQGRGVFMD 358
Query: 366 DAKDTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPP 425
A + +P + WR++LL++ PE SD+ FTW + QA N +L + LGNF +RV F
Sbjct: 359 QALEI-LPADYWRWWLLSHAPENSDSEFTWENFQASVNKDLADVLGNFASRVTKFCRSK- 416
Query: 426 GQGYGSIVP--DANGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGN 483
YG VP A G L L K+ Y E +++AME K L+ +I GN
Sbjct: 417 ---YGEEVPAGGAYGPAEEALIAELTTKLRAY-EGHMDAMEVRKAAAELR---AIWVAGN 469
Query: 484 AYLQESQFWKLYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHI 543
YLQ + W ++K D + + ++R + LV A L +PF+P S + + + +
Sbjct: 470 EYLQAAAPWSVFKTDPDAAAAIIRLGLNLVRFYAVLSQPFIPDASAALLRAMKAED---- 525
Query: 544 SLCDEKGDVDRARRPWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQ 594
GDV A +PAGH P F ++ D + E + KF+G++
Sbjct: 526 --AGWPGDVAEAL---AALPAGHAFAVPEVTFAKISDADREAWAEKFSGTR 571
>sp|Q5LTL1|SYM_RUEPO Methionine--tRNA ligase OS=Ruegeria pomeroyi (strain ATCC 700808 /
DSM 15171 / DSS-3) GN=metG PE=3 SV=1
Length = 572
Score = 409 bits (1050), Expect = e-113, Method: Compositional matrix adjust.
Identities = 226/589 (38%), Positives = 338/589 (57%), Gaps = 43/589 (7%)
Query: 24 ILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMED 83
ILITSA+PY+N + HLGN++GS L AD++AR+ R RG +++C TDE+GT E A +
Sbjct: 4 ILITSAIPYINGIKHLGNLVGSQLPADLYARYQRGRGNEVMFLCATDEHGTPAELAAAKA 63
Query: 84 NCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQ 143
E C + H + D+ + F +SFD+FGR+S+ Q + Q KL +N+ + E + +
Sbjct: 64 GKPVAEYCAEMHGVQADIARRFGLSFDHFGRSSSAQNHKLTQHFAGKLAENDLIREVSER 123
Query: 144 QPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAP- 202
Q Y + RFL DR +EGTCP C Y+ ARGDQCENC K L+ TDL +P+ + +
Sbjct: 124 QVYSNADGRFLPDRYIEGTCP--NCGYDKARGDQCENCTKQLDPTDLIEPRSAISGSTDL 181
Query: 203 QIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLK--EGLKVRCITRDLK 260
++R+T HL+L AL+++L+ +I++ + W WL +GL+ R ITRDL
Sbjct: 182 EVRETKHLYLRQSALKDQLDAWIDSKA---DWPVLTTSIAKKWLHDGDGLQDRGITRDLD 238
Query: 261 WGVPVP-----LERFKEKVFYVWFDAPIGYVSITSCYTN-------EWEQWW---KNPEN 305
WG+PV + KVFYVWFDAPI Y++ + EWE+WW K ++
Sbjct: 239 WGIPVKKGEQDWPGMEGKVFYVWFDAPIEYIACAGEWAEAHGKSDAEWERWWRTDKGADD 298
Query: 306 VELYQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGN 365
V QFMGKDNVPFHT+ FP+TL+G+GE W ++ + YLNY+ G+FS S+G GVF +
Sbjct: 299 VRYVQFMGKDNVPFHTLSFPATLIGSGEPWKMVDHLKSFNYLNYDGGQFSTSQGRGVFMD 358
Query: 366 DAKDTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPP 425
A + +P + WR++LL++ PE SD+ FTW + QA N +L + LGNF++R+ F
Sbjct: 359 QALEI-LPADYWRWWLLSHAPENSDSEFTWENFQASVNKDLADVLGNFVSRITKFCRSK- 416
Query: 426 GQGYGSIVPD--ANGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGN 483
+G VP+ A G + L L ++ Y E ++EAME K Q L+ +I + GN
Sbjct: 417 ---FGEEVPEGGAYGPQEEALIAELTTRLRAY-EGHMEAMEVRKSAQELR---AIWAAGN 469
Query: 484 AYLQESQFWKLYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHI 543
YLQ + W L+K D + +R + L+ L A L PF+P+ S + + +
Sbjct: 470 EYLQSAAPWTLFKTDPVQAAAQVRLGLNLIRLYAVLSAPFIPAASARMLEAMQ------- 522
Query: 544 SLCDEKGDVDRARRPWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAG 592
D+ VD A + P GH P LF ++ D++ E ++ +FAG
Sbjct: 523 -TSDDNWPVDIATALNALAP-GHAFTVPEVLFAKISDEDREGWQQRFAG 569
>sp|Q0ANL8|SYM_MARMM Methionine--tRNA ligase OS=Maricaulis maris (strain MCS10) GN=metG
PE=3 SV=1
Length = 572
Score = 406 bits (1043), Expect = e-112, Method: Compositional matrix adjust.
Identities = 226/594 (38%), Positives = 324/594 (54%), Gaps = 52/594 (8%)
Query: 24 ILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMED 83
ILITSALPY+N V HLGN+ GS+L ADV+ARF RLRG++ +Y+C TDE+GT E A
Sbjct: 4 ILITSALPYINGVKHLGNLAGSMLPADVYARFQRLRGHDVLYVCATDEHGTPAELAADAA 63
Query: 84 NCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQ 143
+ CD+ H I K + F +S+D FGRTS Q + L + + E +
Sbjct: 64 GMDVRAYCDEQHDIQKRSGEGFSLSYDYFGRTSNAPNIRLTQHFAQVLEEKGLIAERVEE 123
Query: 144 QPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAP- 202
Q + RFL DR VEGTCP C +E ARGDQC+NCG+LL TDLK+P K+ +
Sbjct: 124 QVFSIDDDRFLPDRYVEGTCPH--CGFERARGDQCDNCGRLLEPTDLKEPYSKISGSKNL 181
Query: 203 QIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDLKWG 262
++R+T HL L + K+ ++++ + W A + WL EGL+ R ITRDLKWG
Sbjct: 182 EVRETKHLHLVQTQMETKIRDWVD---ASTEWPSLAKSIAYKWLDEGLRDRSITRDLKWG 238
Query: 263 VPV-----PLERFKEKVFYVWFDAPIGYVSITSCYT----NEWEQWW---KNPENVELYQ 310
VPV P E F+ KVFYVWFDAPIGY+ T + +WE WW K ++V Q
Sbjct: 239 VPVAQDGTPREGFEGKVFYVWFDAPIGYIGATVEWAEAGGGDWESWWRTDKGADDVTYVQ 298
Query: 311 FMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDT 370
FMGKDNV FHTV FP+T+LG+ E W + + +L + GKFS S+ GVF + A D
Sbjct: 299 FMGKDNVAFHTVSFPATILGSEEPWKTVDKLKAFNWLTWYGGKFSTSEKRGVFMDQALDI 358
Query: 371 NIPVEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSF-IAKPPGQGY 429
+P + WR+YL N PE SD FTW Q N++L N LGNF+NR+ + ++K G
Sbjct: 359 -LPGDYWRWYLTANAPEGSDAAFTWEHFQGLINSDLANVLGNFVNRITKYTVSKFDGTLP 417
Query: 430 GSIVPDANGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQES 489
+ P N A +A ++ + + + ME ++ ++ +I + GN YL ++
Sbjct: 418 SAGTPGENEA-------WMAAELDQRLPALVANMEAMEFRKAAAEVRAIWAAGNEYLTKA 470
Query: 490 QFWKLYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCDEK 549
+ W YK D + ++ +RT + LV L L +PF+P + ++ L + +
Sbjct: 471 EPWVKYKSDVDAAAVGVRTGLNLVALFGILAQPFIPEAASKILDALGVPDD--------- 521
Query: 550 GDVDRARRPWEI----------IPAGHKIGSPNPLFKELKDDEVEFFRSKFAGS 593
RR WE +P G I P LF +++D +V + +F G+
Sbjct: 522 ------RRSWEFDGPASALLDALPHGMAITPPAVLFAKIEDAQVAEWTERFGGA 569
>sp|Q1GEI7|SYM_RUEST Methionine--tRNA ligase OS=Ruegeria sp. (strain TM1040) GN=metG
PE=3 SV=2
Length = 573
Score = 405 bits (1042), Expect = e-112, Method: Compositional matrix adjust.
Identities = 227/596 (38%), Positives = 341/596 (57%), Gaps = 51/596 (8%)
Query: 24 ILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMED 83
ILITSALPY+N + HLGN++GS L AD++AR+ R RG+ +++C TDE+GT E A +
Sbjct: 4 ILITSALPYINGIKHLGNLVGSQLPADLYARYNRGRGHEVMFLCATDEHGTPAELAAAKA 63
Query: 84 NCSPKEICDKYHVIHKDVYKWFDISFDNFGRTSTPQQTEACQAIFKKLLDNNWLIENTMQ 143
+ C + H + D+ K F +SFD++GR+S+PQ Q KL + + E + +
Sbjct: 64 GKPVADYCAEMHAVQADIAKRFGLSFDHYGRSSSPQNHALTQHFAGKLEEAGLITEVSEK 123
Query: 144 QPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRNAP- 202
Q Y + RFL DR +EGTCP C +E ARGDQCE C K L+ TDL +P+ + +
Sbjct: 124 QVYSNADGRFLPDRYIEGTCP--NCGFEKARGDQCEECTKQLDPTDLINPRSAISGSTDL 181
Query: 203 QIRDTNHLFLDLPALRNKLEEYINNMSVAGSWSQNAIQATHAWLK--EGLKVRCITRDLK 260
++R+T HLFL A+R++L+++I++ + W WL +GL+ R ITRDL
Sbjct: 182 EVRETKHLFLRQSAMRDQLDQWIDSKT---DWPVLTTSIAKKWLHDGDGLQDRGITRDLD 238
Query: 261 WGVPVP-----LERFKEKVFYVWFDAPIGYVSITSCYTN-------EWEQWW---KNPEN 305
WG+ V + KVFYVWFDAPI Y++ + +WE+WW K ++
Sbjct: 239 WGIAVKKGDADWPGMEGKVFYVWFDAPIEYIAAAGEWAEAHGKTDADWERWWRTDKGADD 298
Query: 306 VELYQFMGKDNVPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGN 365
V+ QFMGKDNVPFHT+ FP+TLLG+GE W ++ + YLNY+ G+FS S+G GVF +
Sbjct: 299 VKYVQFMGKDNVPFHTLSFPATLLGSGEPWKMVDHLKSFNYLNYDGGQFSTSQGRGVFMD 358
Query: 366 DAKDTNIPVEVWRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPP 425
A + +P + WR++LL++ PE SD+ FTW + Q N +L + LGNF++R+ F
Sbjct: 359 QALEI-LPADYWRWWLLSHAPESSDSEFTWENFQQSVNKDLADVLGNFVSRITKFCRSK- 416
Query: 426 GQGYGSIVPDAN--GAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGN 483
+G VPD G + L + L+ ++G + E+++EAME K Q L+ +I GN
Sbjct: 417 ---FGEEVPDGGTWGEQEQTLIEELSTRIGAF-ERHMEAMEVRKSAQELR---AIWVAGN 469
Query: 484 AYLQESQFWKLYKEDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQ----P 539
YLQ + W ++KED + +R + L+ L A L PF+P S + L + P
Sbjct: 470 EYLQSAAPWSVFKEDPERAAGQVRLGLNLIRLYAVLSAPFIPDASDRLFAALGTEDRSWP 529
Query: 540 EKHISLCDEKGDVDRARRPWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQA 595
E DV A +PAGH P LF ++ D++ E ++ +FAG ++
Sbjct: 530 E----------DVAAAL---AALPAGHAFTVPEVLFAKITDEQREEWQERFAGGRS 572
>sp|Q8TX28|SYM_METKA Methionine--tRNA ligase OS=Methanopyrus kandleri (strain AV19 / DSM
6324 / JCM 9639 / NBRC 100938) GN=metG PE=3 SV=1
Length = 668
Score = 403 bits (1035), Expect = e-111, Method: Compositional matrix adjust.
Identities = 248/732 (33%), Positives = 381/732 (52%), Gaps = 75/732 (10%)
Query: 24 ILITSALPYVNNVPHLGNIIGSVLSADVFARFCRLRGYNAIYICGTDEYGTATETKAMED 83
+L+T+AL Y N H+G++ + L ADV+ RF ++RG +AI+I GTD +G +A +
Sbjct: 4 VLVTTALAYTNGPLHIGHVRSTYLPADVYTRFLKMRGIDAIHIGGTDNHGVPIALQAELE 63
Query: 84 NCSPKEICDKYHVIHKDVYKWFDISFDNFG---RTSTPQQTEACQAIFKKLLDNNWLIEN 140
P+EI +KYH + K+ + +I FD F R P + Q FK+L + ++ E
Sbjct: 64 GKDPEEIVEKYHEMIKEDLERLNIHFDEFSCTCREFNPDHVDMTQWFFKRLYEAGYIEER 123
Query: 141 TMQQPYCDTCKRFLADRLVEGTCPFEGCNYESARGDQCENCGKLLNATDLKDPKCKVCRN 200
++Q YC C+R L DR VEG CP+ C E ARGD CE CG+ L L++P+C +C +
Sbjct: 124 EVEQLYCPECERPLPDRYVEGVCPY--CGAEGARGDHCEACGRYLEPVQLEEPRCVICGS 181
Query: 201 APQIRDTNHLFLDLPALRNKLEEYI-NNMSVAGSWSQNAIQATHAWLKEGLKVRCITRDL 259
P++R T HLF L L++++ +N ++ + AIQ W++EGLK I RDL
Sbjct: 182 KPEVRRTMHLFFKLSEFEEDLKKWLESNDNLPKNVRNYAIQ----WVREGLKDWDIVRDL 237
Query: 260 KWGVPVPLERFKEKVFYVWFDAPIGYVSITSCYTNEWEQWWKN---PENVELYQFMGKDN 316
WGVPVPLE +++KVFYVWFDAPIGYV+ T Y + Q WK+ E+ ++ F+GKD
Sbjct: 238 DWGVPVPLEGYEDKVFYVWFDAPIGYVTFTKQYCDRVGQDWKDYWFSEDTKIVHFIGKDI 297
Query: 317 VPFHTVMFPSTLLGTGENWTLMKTISVTEYLNYESGKFSKSKGIGVFGNDAKDTNIPVEV 376
+ H + +P+ L+G G TL TI EYL E K S S+G V+ D P ++
Sbjct: 298 IVHHALFWPAMLMGVGA--TLPYTIVAGEYLTLEGEKMSTSRGWVVWVKDFTKL-FPADL 354
Query: 377 WRYYLLTNRPEVSDTLFTWADLQAKSNNELLNNLGNFINRVLSFIAKPPGQGYGSIVPDA 436
RYYL+ P D F+W D + + NNEL+ NLGNF+ R LSFI + D
Sbjct: 355 LRYYLIVVSPLTRDADFSWGDFRDRVNNELVANLGNFVYRTLSFIYR---------FLDG 405
Query: 437 NGAESHQLTKTLAEKVGKYVEQYLEAMEKVKLKQGLKTAMSISSEGNAYLQESQFWKLYK 496
N E+ + + + +K+ + ++ E +EK + ++ L + +S GN Y QE + WKL
Sbjct: 406 NVPEA-ETDQEIVDKIKETHQRVTEHLEKFRFREALTEVLRLSKFGNEYFQEHEPWKLKD 464
Query: 497 EDQPSCSIVMRTSVGLVHLLACLLEPFMPSFSVEVNKQLNLQPEKHISLCDEKGDVDRAR 556
ED C+ V+R +V LA +L PF+P + ++ + L + H DVD
Sbjct: 465 EDPERCAEVLRGCARIVKALAVMLAPFLPDSAEKIWQSLGYEDSVH--------DVDWEE 516
Query: 557 RPWEIIPAGHKIGSPNPLFKELKDDEVEFFRSKFAGSQADRIIRAEAEAAKTAEQLKKTK 616
++ +I P P+F ++ T E L+K K
Sbjct: 517 ALEDV--ETKEIPEPEPIFPKV-----------------------------TEEDLEKAK 545
Query: 617 ISVDGGGKKQKSAKSTAGAKSKTTAEPEISIARLDIRVGKITKVQKHPDADALYVEEIDV 676
+ ++S +S + E RLD+RVGKI + ++ +D L ID+
Sbjct: 546 ALL-----PEESGESEGQDDEYVSLE---EFNRLDLRVGKIKEAERVEGSDRLIKLRIDI 597
Query: 677 GEVQPRTVVSGLVKHIPLEEMQERMVCVLCNLKPVAMRGIKSHAMVLCASTSDNTKVELV 736
G+ + T V+GL EE+ R V VL N++P M G++S AM+L A + + +
Sbjct: 598 GD-RTVTAVAGLYPTYEPEELVGRKVVVLANIQPKEMFGVRSEAMIL-AVGDEPALLTID 655
Query: 737 EPPKSAKIGERV 748
E + + GER+
Sbjct: 656 ESKREVEPGERI 667
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.134 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 315,646,159
Number of Sequences: 539616
Number of extensions: 14011494
Number of successful extensions: 45111
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 916
Number of HSP's successfully gapped in prelim test: 857
Number of HSP's that attempted gapping in prelim test: 39852
Number of HSP's gapped (non-prelim): 2898
length of query: 808
length of database: 191,569,459
effective HSP length: 126
effective length of query: 682
effective length of database: 123,577,843
effective search space: 84280088926
effective search space used: 84280088926
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (30.0 bits)