BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003602
(808 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356512785|ref|XP_003525096.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
[Glycine max]
gi|27261142|gb|AAN87547.1|AF118784_1 ribonucleotide reductase large subunit A [Glycine max]
Length = 809
Score = 1551 bits (4015), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 739/809 (91%), Positives = 772/809 (95%), Gaps = 1/809 (0%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDG+QE VHFDKITARLKKLSYGLS EHCDPVLVSQKVC GVYKGVTTSQLDELA
Sbjct: 1 MYVVKRDGRQETVHFDKITARLKKLSYGLSTEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAAAMT NHPDYASLAARI VSNLHKNTKKSFSETIK MY H+NERS +KAPLIADDV
Sbjct: 61 AETAAAMTANHPDYASLAARIAVSNLHKNTKKSFSETIKVMYYHFNERSAMKAPLIADDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+II+KNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK
Sbjct: 121 YEIIIKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDIDSA++TYHMMSQRWFTHASPTLFNAGTPR QLSSCFLVCMKDDSIEGIYDTLKECA+
Sbjct: 181 DDIDSAVRTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWV DLFMERVQSNG WSLFCPNEAPGLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVSDLFMERVQSNGQWSLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DCWG EFE+LYT+YE+EGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL
Sbjct: 361 DCWGEEFEKLYTQYEREGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I+YTSPTETAVCNLASIALPRYVRE GVPMESHPSKLVGSRGSKNRYF
Sbjct: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRYVREKGVPMESHPSKLVGSRGSKNRYF 480
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EVT IV NLNKIIDVNYYPV+TARRSN+RHRPIGIGVQGLADTFILLG+ FDS
Sbjct: 481 DFDKLGEVTAIVATNLNKIIDVNYYPVDTARRSNMRHRPIGIGVQGLADTFILLGVAFDS 540
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQQLNKDIFETIYYHAL+TSSE+AA+EGPYETY GSP+SKGILQPDMWGV PS RWDW
Sbjct: 541 PEAQQLNKDIFETIYYHALKTSSELAAKEGPYETYSGSPISKGILQPDMWGVMPSSRWDW 600
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+MI+K GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 DALREMIAKTGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
LHDLTEMGLWSP IKN IIY+DGSVQKIP+IP++LK IYKTVWEIKQKTLVDMAVDRGCY
Sbjct: 661 LHDLTEMGLWSPTIKNNIIYEDGSVQKIPEIPDDLKIIYKTVWEIKQKTLVDMAVDRGCY 720
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIHMDQPNFGKLTSLHF+AW +GLKTGMYYLRSRAAADAIKFTVDTS+L E P
Sbjct: 721 IDQSQSLNIHMDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSMLHEKP 780
Query: 781 KVTDDDD-AKMAQMVCSLTNREECMACGS 808
++DD KMAQMVCSLTNREEC+ACGS
Sbjct: 781 MAEEEDDNTKMAQMVCSLTNREECLACGS 809
>gi|225438479|ref|XP_002278202.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
[Vitis vinifera]
gi|296082544|emb|CBI21549.3| unnamed protein product [Vitis vinifera]
Length = 808
Score = 1547 bits (4005), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 734/808 (90%), Positives = 772/808 (95%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDG+QE+VHFDKITARLKKLSYGLSI+HCDPVLVSQKVC GVYKGVTTSQLDELA
Sbjct: 1 MYVVKRDGRQESVHFDKITARLKKLSYGLSIDHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAAAMT NHPDYASLAARIVVSNLHKNTKKSFSETIK+MYNH+NERSGLKAPLIA DV
Sbjct: 61 AETAAAMTANHPDYASLAARIVVSNLHKNTKKSFSETIKEMYNHFNERSGLKAPLIAADV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+IIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLK+QGKVVERPQHMLMRV+VGIHK
Sbjct: 121 YEIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKIQGKVVERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDIDSAIKTYH+MSQRWFTHASPTLFNAGTPR QLSSCFL+CMKDDSIEGIYDTLKECA+
Sbjct: 181 DDIDSAIKTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLICMKDDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNG WSLFCPNEAPGLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGHWSLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DCWG EF LYT+YE+EGKAKKVVQAQNLWFE+LKSQIETGTPYMLFKD+CNKKSNQQNL
Sbjct: 361 DCWGQEFVDLYTQYEREGKAKKVVQAQNLWFEVLKSQIETGTPYMLFKDSCNKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I+YTS ETAVCNLASIALPRYVRE GVPMES+PSKLVGSRGSKNR+F
Sbjct: 421 GTIKSSNLCTEIIEYTSADETAVCNLASIALPRYVREKGVPMESNPSKLVGSRGSKNRFF 480
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLAEVT IVT NLNKIIDVNYYPVETA+RSNLRHRPIG+GVQGLADTFILLGM FDS
Sbjct: 481 DFDKLAEVTAIVTSNLNKIIDVNYYPVETAKRSNLRHRPIGLGVQGLADTFILLGMAFDS 540
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQQLNKDIFETIYYHAL+ S E+A REGPYETY G PVSKGILQPDMWGV PS RWDW
Sbjct: 541 PEAQQLNKDIFETIYYHALKASCELAMREGPYETYDGCPVSKGILQPDMWGVTPSSRWDW 600
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR MIS+NG+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 DALRKMISENGIRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
LHDLTEMGLWSP +KN+IIY++GSV K+ +IPE+LK IY+TVWEIKQKTLVDMAVDRGCY
Sbjct: 661 LHDLTEMGLWSPTLKNQIIYENGSVLKMSEIPEDLKVIYRTVWEIKQKTLVDMAVDRGCY 720
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIHMDQPNFGKLTSLHF+AW +GLKTGMYYLRSRAAADAIKFTVDTS+L+E
Sbjct: 721 IDQSQSLNIHMDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSILQERT 780
Query: 781 KVTDDDDAKMAQMVCSLTNREECMACGS 808
K DDDD KMAQMVCSLTNREECMACGS
Sbjct: 781 KTADDDDTKMAQMVCSLTNREECMACGS 808
>gi|4151068|emb|CAA71816.1| ribonucleotide reductase [Nicotiana tabacum]
Length = 808
Score = 1540 bits (3987), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 730/808 (90%), Positives = 772/808 (95%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG+QE VHFDKITARLKKLSYGLS EHCDPVLVSQKVC GVYKGVTTSQLDELA
Sbjct: 1 MYVWKRDGRQETVHFDKITARLKKLSYGLSPEHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAAA+T NHPDYASLAARI VSNLHKNTKKSFSET+KDMYNH +ERSGLKAPLI+D+V
Sbjct: 61 AETAAALTANHPDYASLAARIAVSNLHKNTKKSFSETVKDMYNHISERSGLKAPLISDEV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+IIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLK+ G VVERPQHMLMRV+VGIHK
Sbjct: 121 YEIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKINGNVVERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDI+SAIKTYH+MSQRWFTHASPTLFNAGTPR QLSSCFLVCMK+DSIEGIYDTLKECA+
Sbjct: 181 DDIESAIKTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKEDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVSVHNIR TGSYIRGTNGTSNGI+PMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 241 ISKSAGGIGVSVHNIRGTGSYIRGTNGTSNGIIPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DIFEFLD+RKNHGKEEHRARDLFYALWVPDLFMERVQSNG WSLFCP+EAPGLA
Sbjct: 301 LEPWHSDIFEFLDMRKNHGKEEHRARDLFYALWVPDLFMERVQSNGQWSLFCPSEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DCWG +FE+LYTKYE+EGKAKKVVQAQNLWFEILKSQIETGTPYML+KD+CN+KSNQQNL
Sbjct: 361 DCWGEDFEKLYTKYEREGKAKKVVQAQNLWFEILKSQIETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I+YTSPTETAVCNLASIALPRYVRE VP ES PSKLVGSRGSKNRYF
Sbjct: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRYVREKEVPDESQPSKLVGSRGSKNRYF 480
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KLAEVT +VT NLNKIIDVNYYPVETA+RSNLRHRPIG+GVQGLADTFILLGM FDS
Sbjct: 481 DFAKLAEVTALVTTNLNKIIDVNYYPVETAKRSNLRHRPIGLGVQGLADTFILLGMSFDS 540
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQQLNKDIFETIYYHAL+ SSE+AA+EGPYETY GSPVSKGILQPDMWGV PSDRWDW
Sbjct: 541 PEAQQLNKDIFETIYYHALKASSELAAKEGPYETYAGSPVSKGILQPDMWGVTPSDRWDW 600
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
G LR MI+KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 GVLRGMIAKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
LHDLTEMGLWSP +KN+IIYDDGSVQKIP+IP++LK IYKTVWEIKQ+TLVDMAVDRGCY
Sbjct: 661 LHDLTEMGLWSPTLKNRIIYDDGSVQKIPEIPQDLKVIYKTVWEIKQRTLVDMAVDRGCY 720
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIHMDQPNFGKLTSLHFHAW RGLKTGMYYLRSRAAADAIKFTVDTS+LKE P
Sbjct: 721 IDQSQSLNIHMDQPNFGKLTSLHFHAWSRGLKTGMYYLRSRAAADAIKFTVDTSMLKEKP 780
Query: 781 KVTDDDDAKMAQMVCSLTNREECMACGS 808
+ DDD KMAQMVCSL+NR+ECMACGS
Sbjct: 781 QTAVDDDTKMAQMVCSLSNRDECMACGS 808
>gi|224096482|ref|XP_002310626.1| predicted protein [Populus trichocarpa]
gi|222853529|gb|EEE91076.1| predicted protein [Populus trichocarpa]
Length = 812
Score = 1535 bits (3975), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 737/812 (90%), Positives = 774/812 (95%), Gaps = 4/812 (0%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDGKQEAVHFDKITARLKKLSYGLS +HCDPVLVSQKVC GVYKGVTTSQLDELA
Sbjct: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSTDHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAAAMT NHPDYASLAARIVVSNLHKNT KSFSETIK MYNH+NE+SGLKAPLIADDV
Sbjct: 61 AETAAAMTANHPDYASLAARIVVSNLHKNTHKSFSETIKIMYNHFNEKSGLKAPLIADDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+IIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK
Sbjct: 121 YEIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDIDSA+KTYH+MSQRWFTHASPTLFNAGTPR QLSSCFLVCMKDDSIEGIYDTLKECA+
Sbjct: 181 DDIDSALKTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+FEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNG WSLFCP+EAPGLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGQWSLFCPSEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DCWG EFE LYT+YE++GKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCN+KSNQQNL
Sbjct: 361 DCWGKEFEELYTRYERDGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I+YTSPTETAVCNLASIALPR+VREMGVP+ESHPSK+VGSRGS RYF
Sbjct: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREMGVPIESHPSKVVGSRGSNRRYF 480
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DFEKLAEVTG+VT NLNKIIDVNYYPVETARRSN RHRPIGIGVQGLAD F+LLGM FDS
Sbjct: 481 DFEKLAEVTGVVTVNLNKIIDVNYYPVETARRSNFRHRPIGIGVQGLADAFMLLGMAFDS 540
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ+LNKDIFETIYYHAL+ SSEIAAREGPYETY GSPVSKGILQPDMWGV PS W+W
Sbjct: 541 PEAQKLNKDIFETIYYHALKASSEIAAREGPYETYVGSPVSKGILQPDMWGVTPSSLWNW 600
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+MISKNGVRNSLL+APMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 DALREMISKNGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
LHDLTEMGLWSP +KNKIIY+DGSVQKIP+I ++LK IYKTVWEIKQKTLVDMAVDRGC+
Sbjct: 661 LHDLTEMGLWSPALKNKIIYEDGSVQKIPEISDDLKCIYKTVWEIKQKTLVDMAVDRGCF 720
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE-N 779
ID SQSLNIHMDQPNFGKLTSLHF+AW +GLKTGMYYLRS+AAADAIKFTVDTSV KE
Sbjct: 721 IDQSQSLNIHMDQPNFGKLTSLHFYAWSKGLKTGMYYLRSQAAADAIKFTVDTSVFKEKK 780
Query: 780 PKV---TDDDDAKMAQMVCSLTNREECMACGS 808
P++ DD K+AQMVCSLTNREECMACGS
Sbjct: 781 PELDDDAAADDTKIAQMVCSLTNREECMACGS 812
>gi|4151066|emb|CAA71815.1| ribonucleotide reductase [Nicotiana tabacum]
Length = 808
Score = 1532 bits (3967), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 723/808 (89%), Positives = 769/808 (95%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDG+QEAVHFDKITARLKKLSYGLS +HCDPVLV+QKVC GVYKGVTTSQLDELA
Sbjct: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSPDHCDPVLVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAAAMT NHPDYA LAARI VSNLHK KKSFSETIKDMY H +ERSGLKAPL++D+V
Sbjct: 61 AETAAAMTANHPDYACLAARIAVSNLHKTPKKSFSETIKDMYYHVSERSGLKAPLVSDEV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+IIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLK+QGKVVERPQHMLMRV+VGIHK
Sbjct: 121 YEIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKIQGKVVERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDI+S IKTYH+MSQRWFTHASPTLFNAGTPR QLSSCFL+CMK+DSIEGIYDTLKECA+
Sbjct: 181 DDIESVIKTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLICMKEDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
L+PWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFM+RVQSNG WSLFCPNEAPGLA
Sbjct: 301 LDPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMQRVQSNGQWSLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DCWG +FE+LY YEKEGKAKKVVQAQNLWFEILKSQIETGTPYML+KDTCN+KSNQQNL
Sbjct: 361 DCWGEDFEKLYINYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLYKDTCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I+YTSP ETAVCNLASIALPRYVRE GVP ES PSKLVGSRGSKNRYF
Sbjct: 421 GTIKSSNLCTEIIEYTSPAETAVCNLASIALPRYVREKGVPSESQPSKLVGSRGSKNRYF 480
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLAEVT +VT NLNKIIDVNYYPVETA+RSNLRHRPIGIGVQGLADTF+LLGM FDS
Sbjct: 481 DFDKLAEVTALVTTNLNKIIDVNYYPVETAKRSNLRHRPIGIGVQGLADTFMLLGMAFDS 540
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQQLNKDIFETIYYHAL+ SSE+AA+EGPYETY GSPVSKGI+QPDMWGV PSD+WDW
Sbjct: 541 REAQQLNKDIFETIYYHALKASSELAAKEGPYETYAGSPVSKGIIQPDMWGVTPSDKWDW 600
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+MI+KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 VALREMITKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L+DLTEMGLWSP +KN+IIY+DGSVQKIP+IP+ELK IYK VWEIKQ+TLVDMAVDRGCY
Sbjct: 661 LYDLTEMGLWSPALKNRIIYEDGSVQKIPEIPDELKEIYKNVWEIKQRTLVDMAVDRGCY 720
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIHMDQPNFGKLTSLHFH W RGLKTGMYYLRSRAAADAIKFTVDT++LKE P
Sbjct: 721 IDQSQSLNIHMDQPNFGKLTSLHFHTWSRGLKTGMYYLRSRAAADAIKFTVDTAMLKEKP 780
Query: 781 KVTDDDDAKMAQMVCSLTNREECMACGS 808
K DDD KMAQMVCSLTNRE+C++CGS
Sbjct: 781 KTAVDDDTKMAQMVCSLTNREDCLSCGS 808
>gi|356509012|ref|XP_003523246.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Glycine max]
Length = 808
Score = 1530 bits (3960), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 727/808 (89%), Positives = 768/808 (95%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDG+QEAVHFDKITARLKKLSYGLS +HCD VLVSQKVC GVYKGVTTSQLDELA
Sbjct: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSADHCDAVLVSQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAAAMTTNHPDYA LAARI VSNLHKNTKKSFSETIK MY H++ERSGLKAPLIADDV
Sbjct: 61 AETAAAMTTNHPDYACLAARIAVSNLHKNTKKSFSETIKIMYYHFSERSGLKAPLIADDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+IIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK
Sbjct: 121 YEIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPR QLSSCFLVCMKDDSIEGIY+TLKECAI
Sbjct: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAI 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVS+H+IRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 241 ISKSAGGIGVSIHDIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+FEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNG WSLFCP+EAPGLA
Sbjct: 301 LEPWHADMFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGQWSLFCPSEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DCWG +FE LY +YE+EGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCN+KSNQQNL
Sbjct: 361 DCWGEKFEELYHRYEREGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I+Y+SPTETAVCNLASIALPRYVRE GVPMESHPSKLVGS GS NRYF
Sbjct: 421 GTIKSSNLCTEIIEYSSPTETAVCNLASIALPRYVREKGVPMESHPSKLVGSTGSGNRYF 480
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLAE+T +VT NLNK+IDVNYYPVE A+RSNLRHRPIGIGVQGLADTFILLGM FDS
Sbjct: 481 DFDKLAEITALVTTNLNKVIDVNYYPVENAKRSNLRHRPIGIGVQGLADTFILLGMAFDS 540
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQQLN++IFETIYYHAL+TS ++AA+EGPYETY GSP+SKGILQPDMWGV PS+RWDW
Sbjct: 541 PEAQQLNQEIFETIYYHALKTSCDLAAKEGPYETYSGSPLSKGILQPDMWGVTPSNRWDW 600
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+MIS NG RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 DALREMISSNGARNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
LHDLTEMGLWSP +KNKIIY+DGSVQKIP++P LK+IYKTVWEIKQ+TLVDMA DRGCY
Sbjct: 661 LHDLTEMGLWSPTLKNKIIYEDGSVQKIPEMPAVLKSIYKTVWEIKQRTLVDMAADRGCY 720
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIHMDQPNFGKLTSLHF+AW +GLKTGMYYLRSRAAADAIKFTVDTS LKE
Sbjct: 721 IDQSQSLNIHMDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSALKEKS 780
Query: 781 KVTDDDDAKMAQMVCSLTNREECMACGS 808
V DD+ KMAQMVCSLTNREEC+ACGS
Sbjct: 781 NVEYDDNTKMAQMVCSLTNREECLACGS 808
>gi|224083844|ref|XP_002307143.1| predicted protein [Populus trichocarpa]
gi|222856592|gb|EEE94139.1| predicted protein [Populus trichocarpa]
Length = 817
Score = 1528 bits (3957), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 735/817 (89%), Positives = 774/817 (94%), Gaps = 9/817 (1%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDG+QE VHFDKITARLKKLSYGLSI+HCDPVLVSQKVC GVYKGVTTSQLDELA
Sbjct: 1 MYVVKRDGRQETVHFDKITARLKKLSYGLSIDHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAAAMT NHPDYASLAARIVVSNLHKNT+KSFSETIK MYNH+N++SGLKA LIADD+
Sbjct: 61 AETAAAMTANHPDYASLAARIVVSNLHKNTQKSFSETIKIMYNHFNDKSGLKAALIADDI 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+IIMKN+ARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK
Sbjct: 121 YEIIMKNSARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDIDSAIKTYH+MSQRWFTHASPTLFNAGTPR QLSSCFLVCMKDDSIEGIYDTLKECA+
Sbjct: 181 DDIDSAIKTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVS HNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 241 ISKSAGGIGVSAHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+FEFLDLRKNHGKEE+RARDLFYALWVPDLFMERVQSNG WSLFCPNEAPGLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEENRARDLFYALWVPDLFMERVQSNGQWSLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DCWG EFE LYT+YE+ GKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCN+KSNQQNL
Sbjct: 361 DCWGKEFEELYTRYERNGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I+YTSPTETAVCNLASIALPR+VREMGVP+ESHPSKLVGSRG K+RYF
Sbjct: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREMGVPVESHPSKLVGSRGFKSRYF 480
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DFEKLAEVTG+VT NLNKIIDVNYYPVETARRSN RHRPIGIGVQGLADTFILLGM FDS
Sbjct: 481 DFEKLAEVTGVVTSNLNKIIDVNYYPVETARRSNFRHRPIGIGVQGLADTFILLGMSFDS 540
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSD-RWD 599
EAQ+LNKDIFETIYYHAL+ SSEIAAREGPYETY GSPVSKGILQPDMWGV PS+ WD
Sbjct: 541 PEAQKLNKDIFETIYYHALKASSEIAAREGPYETYEGSPVSKGILQPDMWGVTPSNLLWD 600
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR+MISKNGVRNSLL+APMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH
Sbjct: 601 WDALREMISKNGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 660
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LLHDLTEMGLWSP +KNKIIY+DGSVQ IP+IP +LK IYKTVWEIKQKTLVDMAVDRGC
Sbjct: 661 LLHDLTEMGLWSPALKNKIIYEDGSVQNIPEIPNDLKFIYKTVWEIKQKTLVDMAVDRGC 720
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN 779
YID SQSLNIHMDQPNFGKLTSLHF+AW +GLKTGMYYLRSRAAADAIKFTVDTSVL++
Sbjct: 721 YIDQSQSLNIHMDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSVLQDK 780
Query: 780 PKVTD--------DDDAKMAQMVCSLTNREECMACGS 808
+D DDD KMAQMVCSL NR++C+ACGS
Sbjct: 781 KLKSDGAAAAAADDDDTKMAQMVCSLANRDDCLACGS 817
>gi|40850562|gb|AAR95994.1| putative ribonucleotide reductase large subunit [Musa acuminata]
Length = 810
Score = 1527 bits (3954), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 728/810 (89%), Positives = 768/810 (94%), Gaps = 2/810 (0%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDG+ EAVHFDKITARLKKLSYGL+ EHCDPVLV+QKVC GVYKGVTTSQLDELA
Sbjct: 1 MYVVKRDGRPEAVHFDKITARLKKLSYGLTQEHCDPVLVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAAAMT NHPDYASLAARIVVSNLHKNTKKSFSETIK MY+H+NERSG +APLIADDV
Sbjct: 61 AETAAAMTANHPDYASLAARIVVSNLHKNTKKSFSETIKLMYHHFNERSGQEAPLIADDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+IIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKV G VVERPQHMLMRVAVGIHK
Sbjct: 121 YEIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVSGMVVERPQHMLMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDI S I+TYH+MSQRWFTHASPTLFNAGTPR QLSSCFL+CMK+DSIEGIYDTLKECAI
Sbjct: 181 DDIKSVIRTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLICMKEDSIEGIYDTLKECAI 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD++EFL+LRKNHGKEEHRARDLFYALW+PDLFMERVQSNG WSLFCPNEAPGLA
Sbjct: 301 LEPWHADMYEFLELRKNHGKEEHRARDLFYALWIPDLFMERVQSNGQWSLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DCWG EFE+LY KYE EGKAKKVV AQNLWFEILKSQIETGTPYMLFKDTCN+KSNQQNL
Sbjct: 361 DCWGDEFEKLYLKYEDEGKAKKVVAAQNLWFEILKSQIETGTPYMLFKDTCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I+YTSPTETAVCNLASIALPR+VRE GVP+ESHPS+LVGS GSKNRYF
Sbjct: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKGVPLESHPSRLVGSSGSKNRYF 480
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EVT I+TENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS
Sbjct: 481 DFDKLGEVTAIITENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQQLNKDIFETIYYHAL++SSEIA GPYETY GSPVSKGILQPDMW V SDRWDW
Sbjct: 541 PEAQQLNKDIFETIYYHALKSSSEIAISSGPYETYQGSPVSKGILQPDMWNVTLSDRWDW 600
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+MISKNGVRNSLL+APMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 AALREMISKNGVRNSLLIAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
LHDLTEMGLWSP +KNKIIY+DGSV KIP+IP+ LKAIYKTVWEIKQ+TLVDMAVDRGCY
Sbjct: 661 LHDLTEMGLWSPALKNKIIYEDGSVLKIPEIPDNLKAIYKTVWEIKQRTLVDMAVDRGCY 720
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIHMDQPNFGKLTSLHF+AW +GLKTGMYYLRSRAAADAIKFTVDTS+L++
Sbjct: 721 IDQSQSLNIHMDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSLLQKTT 780
Query: 781 KVTDDDD--AKMAQMVCSLTNREECMACGS 808
K +DDD AKMAQ+VCSL NREECMACGS
Sbjct: 781 KPVEDDDVEAKMAQVVCSLENREECMACGS 810
>gi|351722146|ref|NP_001236466.1| ribonucleotide reductase large subunit B [Glycine max]
gi|27261144|gb|AAN87548.1|AF118785_1 ribonucleotide reductase large subunit B [Glycine max]
Length = 808
Score = 1517 bits (3927), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 719/808 (88%), Positives = 764/808 (94%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKR+G+QE VHFDKITARLKKLSYGLS +HCD VLV+QKVC GVYKGVTTSQLDELA
Sbjct: 1 MYVVKRNGRQETVHFDKITARLKKLSYGLSSDHCDAVLVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAAAMT NHPDYA LAARI VSNLHKNTKKSFSETIK MY H+NERSGLKAPLIADDV
Sbjct: 61 AETAAAMTANHPDYACLAARIAVSNLHKNTKKSFSETIKIMYYHFNERSGLKAPLIADDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+IIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQG+V+ERPQHMLMRVAVGIHK
Sbjct: 121 YEIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGQVLERPQHMLMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDIDSA+KTYHMMSQRWFTHASPTLFNAGTPR QLSSCFLVCMKDDSIEGIY+TLKECAI
Sbjct: 181 DDIDSAVKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAI 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVS+H+IRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 241 ISKSAGGIGVSIHDIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+FEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNG WSLFCP+EAPGL
Sbjct: 301 LEPWHADMFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGQWSLFCPSEAPGLT 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DCWG +FE LY +YE+EGKA KVVQAQ+LWFEILKSQIETGTPYMLFKDTCN+KSNQQNL
Sbjct: 361 DCWGEKFEELYLQYEREGKAMKVVQAQSLWFEILKSQIETGTPYMLFKDTCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I+Y+SPTETAVCNLASIALPRYVRE GVPMESHPSKLVGS S NRYF
Sbjct: 421 GTIKSSNLCTEIIEYSSPTETAVCNLASIALPRYVREKGVPMESHPSKLVGSTCSGNRYF 480
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLAE+T +VT NLNK+IDVNYYPVE A+RSNLRHRPIGIGVQGLADTFILLGM FDS
Sbjct: 481 DFDKLAEITALVTTNLNKVIDVNYYPVENAKRSNLRHRPIGIGVQGLADTFILLGMAFDS 540
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQQLNK+IFETIYYHAL+TS +AA+EGPYETY GSP+SKGILQPDMWGV PS+RWDW
Sbjct: 541 PEAQQLNKEIFETIYYHALKTSCGLAAKEGPYETYSGSPISKGILQPDMWGVAPSNRWDW 600
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 DALREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
LHDLTEMGLWSP +KNKIIY+DGSVQKIP+IP +LK IYKTVWEIKQ+TLVDMA DRGCY
Sbjct: 661 LHDLTEMGLWSPTLKNKIIYEDGSVQKIPEIPADLKNIYKTVWEIKQRTLVDMAADRGCY 720
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIHMDQPNFGKLTSL F+AW +GLKTGMYYLRSRAAADAIKFTVDTS L+E
Sbjct: 721 IDQSQSLNIHMDQPNFGKLTSLQFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSALREKS 780
Query: 781 KVTDDDDAKMAQMVCSLTNREECMACGS 808
V DDD+ KMAQMVCSLTNR+EC+ACGS
Sbjct: 781 NVEDDDNTKMAQMVCSLTNRDECLACGS 808
>gi|297821381|ref|XP_002878573.1| R1/RIBONUCLEOTIDE REDUCTASE, reductase protein R1 [Arabidopsis
lyrata subsp. lyrata]
gi|297324412|gb|EFH54832.1| R1/RIBONUCLEOTIDE REDUCTASE, reductase protein R1 [Arabidopsis
lyrata subsp. lyrata]
Length = 817
Score = 1516 bits (3926), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 709/817 (86%), Positives = 766/817 (93%), Gaps = 9/817 (1%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDG+QE VHFDKITARLKKLSYGLS +HCDPVLV+QKVC GVYKGVTTSQLDELA
Sbjct: 1 MYVVKRDGRQETVHFDKITARLKKLSYGLSSDHCDPVLVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAAAMT NHPDYASLAARI VSNLHKNTKKSFSETIKDM+NH N+RSGLK+PLIADDV
Sbjct: 61 AETAAAMTCNHPDYASLAARIAVSNLHKNTKKSFSETIKDMFNHVNDRSGLKSPLIADDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+DIIM+NAARLDSEIIYDRDF+YDYFGFKTLERSYLLKVQG VVERPQHMLMRVAVGIHK
Sbjct: 121 FDIIMQNAARLDSEIIYDRDFEYDYFGFKTLERSYLLKVQGTVVERPQHMLMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDIDSAI+TYH+MSQRWFTHASPTLFNAGTPR QLSSCFLVCMKDDSIEGIY+TLKECA+
Sbjct: 181 DDIDSAIQTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK-GAFAV 299
ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK GAFAV
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKEGAFAV 300
Query: 300 YLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGL 359
YLEPWHAD+FEFL+LRKNHGKEEHRARDLFYALWVPDLFMERVQSNG WSLFCPNEAPGL
Sbjct: 301 YLEPWHADVFEFLELRKNHGKEEHRARDLFYALWVPDLFMERVQSNGQWSLFCPNEAPGL 360
Query: 360 ADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQN 419
ADCWG EFE LYTKYE+EGKAKKVVQAQ LW+EIL SQ+ETGTPYMLFKD+CN+KSNQQN
Sbjct: 361 ADCWGAEFETLYTKYEREGKAKKVVQAQQLWYEILTSQVETGTPYMLFKDSCNRKSNQQN 420
Query: 420 LGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRY 479
LGTIKSSNLCTE+I+YTSPTETAVCNLASIALPR+VRE GVP++SHPSKL GS GSKNRY
Sbjct: 421 LGTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKGVPLDSHPSKLAGSLGSKNRY 480
Query: 480 FDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFD 539
FDF+KLAEVT VT NLNKIIDVNYYPVETA+ SN+RHRPIGIGVQGLAD FILLGMPFD
Sbjct: 481 FDFDKLAEVTATVTLNLNKIIDVNYYPVETAKTSNMRHRPIGIGVQGLADAFILLGMPFD 540
Query: 540 STEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWD 599
S EAQQLNKDIFETIYYHAL+ SSE+AAR GPYETY GSPVSKGILQPDMW V PS+RWD
Sbjct: 541 SPEAQQLNKDIFETIYYHALKASSELAARVGPYETYSGSPVSKGILQPDMWNVIPSNRWD 600
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH
Sbjct: 601 WAVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 660
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LLHDLT+MGLW+P +KNK+I ++GS+ + +IP++LKAIY+TVWEIKQ+T+VDMAVDRGC
Sbjct: 661 LLHDLTDMGLWTPTLKNKLINENGSIVNVAEIPDDLKAIYRTVWEIKQRTVVDMAVDRGC 720
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN 779
YID SQSLNIHMD+PNF KLTSLHF+AW +GLKTGMYYLRSRAAADAIKFTVDT++LKE
Sbjct: 721 YIDQSQSLNIHMDKPNFAKLTSLHFYAWTKGLKTGMYYLRSRAAADAIKFTVDTAMLKEK 780
Query: 780 PKVT--------DDDDAKMAQMVCSLTNREECMACGS 808
P V +D++ K+AQMVCSLTN ++C+ACGS
Sbjct: 781 PSVAEGDKEVEEEDNETKLAQMVCSLTNPDDCLACGS 817
>gi|15227096|ref|NP_179770.1| ribonucleoside-diphosphate reductase subunit M1 [Arabidopsis
thaliana]
gi|56749666|sp|Q9SJ20.1|RIR1_ARATH RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleoside-diphosphate reductase R1
subunit; Short=AtRNR1
gi|4417273|gb|AAD20398.1| putative ribonucleoside-diphosphate reductase large subunit
[Arabidopsis thaliana]
gi|14334814|gb|AAK59585.1| putative ribonucleoside-diphosphate reductase large subunit
[Arabidopsis thaliana]
gi|30793895|gb|AAP40400.1| putative ribonucleoside-diphosphate reductase large subunit
[Arabidopsis thaliana]
gi|330252128|gb|AEC07222.1| ribonucleoside-diphosphate reductase subunit M1 [Arabidopsis
thaliana]
Length = 816
Score = 1506 bits (3898), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 702/816 (86%), Positives = 760/816 (93%), Gaps = 8/816 (0%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDG+QE VHFDKITARLKKLSYGLS +HCDPVLV+QKVC GVYKGVTTSQLDELA
Sbjct: 1 MYVVKRDGRQETVHFDKITARLKKLSYGLSSDHCDPVLVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAAAMT NHPDYASLAARI VSNLHKNTKKSFSETIKDM+ H N+RSGLK+PLIADDV
Sbjct: 61 AETAAAMTCNHPDYASLAARIAVSNLHKNTKKSFSETIKDMFYHVNDRSGLKSPLIADDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
++IIM+NAARLDSEIIYDRDF+YDYFGFKTLERSYLLKVQG VVERPQHMLMRVAVGIHK
Sbjct: 121 FEIIMQNAARLDSEIIYDRDFEYDYFGFKTLERSYLLKVQGTVVERPQHMLMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDIDS I+TYH+MSQRWFTHASPTLFNAGTPR QLSSCFLVCMKDDSIEGIY+TLKECA+
Sbjct: 181 DDIDSVIQTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYETLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD++EFL+LRKNHGKEEHRARDLFYALW+PDLFMERVQ+NG WSLFCPNEAPGLA
Sbjct: 301 LEPWHADVYEFLELRKNHGKEEHRARDLFYALWLPDLFMERVQNNGQWSLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DCWG EFE LYTKYE+EGKAKKVVQAQ LW+EIL SQ+ETGTPYMLFKD+CN+KSNQQNL
Sbjct: 361 DCWGAEFETLYTKYEREGKAKKVVQAQQLWYEILTSQVETGTPYMLFKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I+YTSPTETAVCNLASIALPR+VRE GVP++SHP KL GS SKNRYF
Sbjct: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKGVPLDSHPPKLAGSLDSKNRYF 480
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DFEKLAEVT VT NLNKIIDVNYYPVETA+ SN+RHRPIGIGVQGLAD FILLGMPFDS
Sbjct: 481 DFEKLAEVTATVTVNLNKIIDVNYYPVETAKTSNMRHRPIGIGVQGLADAFILLGMPFDS 540
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQQLNKDIFETIYYHAL+ S+E+AAR GPYETY GSPVSKGILQPDMW V PSDRWDW
Sbjct: 541 PEAQQLNKDIFETIYYHALKASTELAARLGPYETYAGSPVSKGILQPDMWNVIPSDRWDW 600
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 AVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
LHDLT+MGLW+P +KNK+I ++GS+ + +IP++LKAIY+TVWEIKQ+T+VDMA DRGCY
Sbjct: 661 LHDLTDMGLWTPTLKNKLINENGSIVNVAEIPDDLKAIYRTVWEIKQRTVVDMAADRGCY 720
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIHMD+PNF KLTSLHF+ W +GLKTGMYYLRSRAAADAIKFTVDT++LKE P
Sbjct: 721 IDQSQSLNIHMDKPNFAKLTSLHFYTWKKGLKTGMYYLRSRAAADAIKFTVDTAMLKEKP 780
Query: 781 KVT--------DDDDAKMAQMVCSLTNREECMACGS 808
V +D++ K+AQMVCSLTN EEC+ACGS
Sbjct: 781 SVAEGDKEVEEEDNETKLAQMVCSLTNPEECLACGS 816
>gi|3661603|gb|AAC61773.1| ribonucleoside-diphosphate reductase large subunit [Arabidopsis
thaliana]
Length = 816
Score = 1504 bits (3893), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 701/816 (85%), Positives = 759/816 (93%), Gaps = 8/816 (0%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDG+QE VHFDKITARLKKLSYGLS +HCDP+LV+QKVC GVYKGVTTSQLDELA
Sbjct: 1 MYVVKRDGRQETVHFDKITARLKKLSYGLSSDHCDPILVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAAAMT NHPDYASLAARI VSNLHKNTKKSFSETIKDM+ H N+RSGLK+PLIADDV
Sbjct: 61 AETAAAMTCNHPDYASLAARIAVSNLHKNTKKSFSETIKDMFYHVNDRSGLKSPLIADDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
++IIM+NAARLDSEIIYDRDF+YDYFGFKTLERSYLLKVQG VVERPQHMLMRVAVGIHK
Sbjct: 121 FEIIMQNAARLDSEIIYDRDFEYDYFGFKTLERSYLLKVQGTVVERPQHMLMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDIDS I+TYH+MSQRWFTHASPTLFNAGTPR QLSSCFLVCMKDDSIEGIY TLKECA+
Sbjct: 181 DDIDSVIQTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYGTLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD++EFL+LRKNHGKEEHRARDLFYALW+PDLFMERVQ+NG WSLFCPNEAPGLA
Sbjct: 301 LEPWHADVYEFLELRKNHGKEEHRARDLFYALWLPDLFMERVQNNGQWSLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DCWG EFE LYTKYE+EGKAKKVVQAQ LW+EIL SQ+ETGTPYMLFKD+CN+KSNQQNL
Sbjct: 361 DCWGAEFETLYTKYEREGKAKKVVQAQQLWYEILTSQVETGTPYMLFKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I+YTSPTETAVCNLASIALPR+VRE GVP++SHP KL GS SKNRYF
Sbjct: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKGVPLDSHPPKLAGSLDSKNRYF 480
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DFEKLAEVT VT NLNKIIDVNYYPVETA+ SN+RHRPIGIGVQGLAD FILLGMPFDS
Sbjct: 481 DFEKLAEVTATVTVNLNKIIDVNYYPVETAKTSNMRHRPIGIGVQGLADAFILLGMPFDS 540
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQQLNKDIFETIYYHAL+ S+E+AAR GPYETY GSPVSKGILQPDMW V PSDRWDW
Sbjct: 541 PEAQQLNKDIFETIYYHALKASTELAARLGPYETYAGSPVSKGILQPDMWNVIPSDRWDW 600
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 AVLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
LHDLT+MGLW+P +KNK+I ++GS+ + +IP++LKAIY+TVWEIKQ+T+VDMA DRGCY
Sbjct: 661 LHDLTDMGLWTPTLKNKLINENGSIVNVAEIPDDLKAIYRTVWEIKQRTVVDMAADRGCY 720
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIHMD+PNF KLTSLHF+ W +GLKTGMYYLRSRAAADAIKFTVDT++LKE P
Sbjct: 721 IDQSQSLNIHMDKPNFAKLTSLHFYTWKKGLKTGMYYLRSRAAADAIKFTVDTAMLKEKP 780
Query: 781 KVT--------DDDDAKMAQMVCSLTNREECMACGS 808
V +D++ K+AQMVCSLTN EEC+ACGS
Sbjct: 781 SVAEGDKEVEEEDNETKLAQMVCSLTNPEECLACGS 816
>gi|357519755|ref|XP_003630166.1| Ribonucleoside-diphosphate reductase [Medicago truncatula]
gi|355524188|gb|AET04642.1| Ribonucleoside-diphosphate reductase [Medicago truncatula]
Length = 819
Score = 1500 bits (3884), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 710/819 (86%), Positives = 759/819 (92%), Gaps = 11/819 (1%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDG+QEAVHFDKITARLKKLSYGLS EHCDPVLV+QKVC GVYKGVTTSQLDELA
Sbjct: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSTEHCDPVLVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT NHPDYASLAARI VSNLHKNT KSFSET+K MYNH+N RSG KAPLIADDV
Sbjct: 61 AETAAGMTANHPDYASLAARIAVSNLHKNTLKSFSETVKVMYNHFNHRSGKKAPLIADDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+II+KNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQG VVERPQHM+MRV+VGIHK
Sbjct: 121 YEIIIKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGVVVERPQHMIMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD++SA+KTYH MSQRWFTHASPTLFNAGTPR QLSSCFLVCMK+DSIEGIYDTLKECA+
Sbjct: 181 DDVESAVKTYHFMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKEDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVSVHNIRA GSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 241 ISKSAGGIGVSVHNIRAHGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIFEFL+L+ NHGKEE RARDLFYALWVPDLFMERVQSNG WSLFCPNEAPGLA
Sbjct: 301 LEPWHADIFEFLELKINHGKEEQRARDLFYALWVPDLFMERVQSNGEWSLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DCWG E+++LYT+YEK GKAKK+VQAQ+LWF ILKSQIETG PYMLFKD CN+KSNQQNL
Sbjct: 361 DCWGEEYDKLYTQYEKAGKAKKIVQAQSLWFAILKSQIETGNPYMLFKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I+YTSPTETAVCNLASIALPRYVR+ G+P+ESH SKLVGSRGS +RYF
Sbjct: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRYVRDKGLPVESHQSKLVGSRGSSSRYF 480
Query: 481 DFEKLAEV-------TGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFIL 533
DFEKL EV T +VT NLNKIIDVNYYPVETA RSNLRHRPIGIGVQGLADTFIL
Sbjct: 481 DFEKLGEVHLLLTTVTAVVTTNLNKIIDVNYYPVETAERSNLRHRPIGIGVQGLADTFIL 540
Query: 534 LGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVN 593
LGM FDS EAQQLNKDIFETIYYHAL+TS E+AA+EGPYETY GSPVSKGILQPDMWGV
Sbjct: 541 LGMAFDSPEAQQLNKDIFETIYYHALKTSCELAAKEGPYETYSGSPVSKGILQPDMWGVT 600
Query: 594 PSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEF 653
PS+ WDWG LR+MISK GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF
Sbjct: 601 PSNLWDWGALREMISKTGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYNRRVLSGEF 660
Query: 654 VVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDM 713
VVVNKHLLHDLTEMGLW+P +KNKIIYD+GSVQ + +IP ELK IYKTVWEIKQK LVDM
Sbjct: 661 VVVNKHLLHDLTEMGLWNPALKNKIIYDNGSVQNLSEIPAELKVIYKTVWEIKQKILVDM 720
Query: 714 AVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDT 773
AVDRGCYID SQSLNIHMD+PNFGKLTSLHF+AW +GLKTGMYYLR+RAA+DAIKFTVDT
Sbjct: 721 AVDRGCYIDQSQSLNIHMDKPNFGKLTSLHFYAWSKGLKTGMYYLRTRAASDAIKFTVDT 780
Query: 774 SVLKENPKVT----DDDDAKMAQMVCSLTNREECMACGS 808
S +K+ PKV +DDD KMAQMVCSLTNR+EC ACGS
Sbjct: 781 SAIKDQPKVKEADDEDDDTKMAQMVCSLTNRDECEACGS 819
>gi|218201671|gb|EEC84098.1| hypothetical protein OsI_30411 [Oryza sativa Indica Group]
Length = 814
Score = 1499 bits (3881), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 709/814 (87%), Positives = 767/814 (94%), Gaps = 6/814 (0%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDG+QE VHFDKITARLKKLSYGLS EHCDPVLV+QKVC GVYKGVTTSQLDELA
Sbjct: 1 MYVVKRDGRQETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAAAMT +HPDYASLAARI VSNLHKNTKKSFSETIKDMY H+NERSGL APL+A DV
Sbjct: 61 AETAAAMTASHPDYASLAARIAVSNLHKNTKKSFSETIKDMYGHFNERSGLNAPLVAHDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y++IMKNA+RLDSEIIYDRDFDYDYFGFKTLERSYLLK+ GKVVERPQHMLMRV+VGIHK
Sbjct: 121 YEVIMKNASRLDSEIIYDRDFDYDYFGFKTLERSYLLKLGGKVVERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDI+SAIKTYH+MSQRWFTHASPTLFNAGTPR QLSSCFL+CMKDDSIEGIYDTLKECA+
Sbjct: 181 DDIESAIKTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLICMKDDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFM+RVQ+N WSLFCPNEAPGLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMQRVQNNQEWSLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DCWG EFE+LYTKYE+EGKAKK+V AQ LWF+ILK+QIETGTPYML+KDTCN+KSNQQNL
Sbjct: 361 DCWGDEFEKLYTKYEREGKAKKIVPAQTLWFDILKAQIETGTPYMLYKDTCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I+YTSPTETAVCNLASIALPR+VRE GVP+ESHPSKLVGS SKNRYF
Sbjct: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKGVPIESHPSKLVGSSDSKNRYF 480
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLAEVT VT NLNKIID+NYYPVETA+RSN+RHRPIGIGVQGLADTFILLGMPFDS
Sbjct: 481 DFDKLAEVTSTVTYNLNKIIDINYYPVETAKRSNMRHRPIGIGVQGLADTFILLGMPFDS 540
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQQLNKDIFETIY+H+L+ S+E+A +EGPYETY GSPVSKGILQPDMW V PSDRW+W
Sbjct: 541 PEAQQLNKDIFETIYFHSLKASAELAGKEGPYETYEGSPVSKGILQPDMWNVVPSDRWNW 600
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR ISK G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 PSLRSTISKVGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
LHDLTEMG+W+P +KNKII++DGSVQK+ +IP++LKAIYKTVWEIKQKTLVDMAVDRGCY
Sbjct: 661 LHDLTEMGVWTPALKNKIIFEDGSVQKMTEIPDDLKAIYKTVWEIKQKTLVDMAVDRGCY 720
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN- 779
ID SQSLN+HM+QPNFGKLTSLHFHAW +GLKTGMYYLR+RAAADAIKFTVDT++LK N
Sbjct: 721 IDQSQSLNVHMEQPNFGKLTSLHFHAWSKGLKTGMYYLRTRAAADAIKFTVDTALLKANG 780
Query: 780 ---PKVTDDDD--AKMAQMVCSLTNREECMACGS 808
K +++D AKMAQMVCSL NREEC+ACGS
Sbjct: 781 ENGTKAAEEEDVEAKMAQMVCSLNNREECLACGS 814
>gi|115466654|ref|NP_001056926.1| Os06g0168600 [Oryza sativa Japonica Group]
gi|55296056|dbj|BAD67618.1| putative ribonucleotide reductase [Oryza sativa Japonica Group]
gi|55296229|dbj|BAD67970.1| putative ribonucleotide reductase [Oryza sativa Japonica Group]
gi|113594966|dbj|BAF18840.1| Os06g0168600 [Oryza sativa Japonica Group]
gi|222635036|gb|EEE65168.1| hypothetical protein OsJ_20270 [Oryza sativa Japonica Group]
Length = 814
Score = 1498 bits (3879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 710/814 (87%), Positives = 766/814 (94%), Gaps = 6/814 (0%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDG+QE VHFDKITARLKKLSYGLS EHCDPVLV+QKVC GVYKGVTTSQLDELA
Sbjct: 1 MYVVKRDGRQETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAAAMT +HPDYASLAARI VSNLHKNTKKSFSETIKDMY H+NERSGL APL+A DV
Sbjct: 61 AETAAAMTASHPDYASLAARIAVSNLHKNTKKSFSETIKDMYGHFNERSGLNAPLVAHDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y++IMKNA+RLDSEIIYDRDFDYDYFGFKTLERSYLLK+ GKVVERPQHMLMRV+VGIHK
Sbjct: 121 YEVIMKNASRLDSEIIYDRDFDYDYFGFKTLERSYLLKLGGKVVERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDI+SAIKTYH+MSQRWFTHASPTLFNAGTPR QLSSCFL+CMKDDSIEGIYDTLKECA+
Sbjct: 181 DDIESAIKTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLICMKDDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFM+RVQ+N WSLFCPNEAPGLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMQRVQNNQEWSLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DCWG EFE+LYTKYE+EGKAKK+V AQ LWF+ILK+QIETGTPYML+KDTCN+KSNQQNL
Sbjct: 361 DCWGDEFEKLYTKYEREGKAKKIVPAQTLWFDILKAQIETGTPYMLYKDTCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I+YTSPTETAVCNLASIALPR+VRE GVP+ESHPSKLVGS SKNRYF
Sbjct: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKGVPIESHPSKLVGSSDSKNRYF 480
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLAEVT VT NLNKIID+NYYPVETA+RSN+RHRPIGIGVQGLADTFILLGMPFDS
Sbjct: 481 DFDKLAEVTSTVTYNLNKIIDINYYPVETAKRSNMRHRPIGIGVQGLADTFILLGMPFDS 540
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQQLNKDIFETIY+H+L+ S+E+A +EGPYETY GSPVSKGILQPDMW V PSDRW+W
Sbjct: 541 PEAQQLNKDIFETIYFHSLKASAELAGKEGPYETYEGSPVSKGILQPDMWNVVPSDRWNW 600
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR ISK G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 PSLRSTISKVGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
LHDLTEMG+W+P +KNKIIY+DGSVQK+ IP++LKAIYKTVWEIKQKTLVDMAVDRGCY
Sbjct: 661 LHDLTEMGVWTPALKNKIIYEDGSVQKMTVIPDDLKAIYKTVWEIKQKTLVDMAVDRGCY 720
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN- 779
ID SQSLN+HM+QPNFGKLTSLHFHAW +GLKTGMYYLR+RAAADAIKFTVDT++LK N
Sbjct: 721 IDQSQSLNVHMEQPNFGKLTSLHFHAWSKGLKTGMYYLRTRAAADAIKFTVDTALLKANG 780
Query: 780 ---PKVTDDDD--AKMAQMVCSLTNREECMACGS 808
K +++D AKMAQMVCSL NREEC+ACGS
Sbjct: 781 ENGTKAAEEEDVEAKMAQMVCSLNNREECLACGS 814
>gi|147775539|emb|CAN71697.1| hypothetical protein VITISV_003192 [Vitis vinifera]
Length = 791
Score = 1498 bits (3877), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 717/808 (88%), Positives = 753/808 (93%), Gaps = 17/808 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDG+QE+VHFDKITARLKKLSYGLSI+HCDPVLVSQKVC GVYKGVTTSQLDELA
Sbjct: 1 MYVVKRDGRQESVHFDKITARLKKLSYGLSIDHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAAAMT NHPDYASLAARIVVSNLHKNTKKSFSETIK+MYNH+NERSGLKAPLIA DV
Sbjct: 61 AETAAAMTANHPDYASLAARIVVSNLHKNTKKSFSETIKEMYNHFNERSGLKAPLIAADV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+IIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLK+QGKVVERPQHMLMRV+VGIHK
Sbjct: 121 YEIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKIQGKVVERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDIDSAIKTYH+MSQRWFTHASPTLFNAGTPR QLSSCFL+CMKDDSIEGIYDTLKECA+
Sbjct: 181 DDIDSAIKTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLICMKDDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNG WSLFCP EAPGLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGHWSLFCPXEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DCWG EF LYT+YE+EGKAKKVVQAQNLWFE+LKSQIETGTPYMLFKD+CNKKSNQQNL
Sbjct: 361 DCWGQEFVDLYTQYEREGKAKKVVQAQNLWFEVLKSQIETGTPYMLFKDSCNKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I+YTS ETAVCNLASIALPRYVRE GVPMES+PSKLVGSRGSKNR+F
Sbjct: 421 GTIKSSNLCTEIIEYTSADETAVCNLASIALPRYVREKGVPMESNPSKLVGSRGSKNRFF 480
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLAEVT IVT NLNKIIDVNYYP QGLADTFILLGM FDS
Sbjct: 481 DFDKLAEVTAIVTSNLNKIIDVNYYP-----------------FQGLADTFILLGMAFDS 523
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQQLNKDIFETIYYHAL+ S E+A REGPYETY G PVSKGILQPDMWGV PS RWDW
Sbjct: 524 PEAQQLNKDIFETIYYHALKASCELAMREGPYETYDGCPVSKGILQPDMWGVTPSSRWDW 583
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR MIS+NG+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 584 DALRKMISENGIRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 643
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
LHDLTEMGLWSP +KN+IIY++GSV K+ +IPE+LK IY+TVWEIKQKTLVDMAVDRGCY
Sbjct: 644 LHDLTEMGLWSPTLKNQIIYENGSVLKMSEIPEDLKVIYRTVWEIKQKTLVDMAVDRGCY 703
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIHMDQPNFGKLTSLHF+AW +GLKTGMYYLRSRAAADAIKFTVDTS+L+E
Sbjct: 704 IDQSQSLNIHMDQPNFGKLTSLHFYAWSKGLKTGMYYLRSRAAADAIKFTVDTSILQERT 763
Query: 781 KVTDDDDAKMAQMVCSLTNREECMACGS 808
K DDDD KMAQMVCSLTNREECMACGS
Sbjct: 764 KTADDDDTKMAQMVCSLTNREECMACGS 791
>gi|449448442|ref|XP_004141975.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Cucumis sativus]
gi|449497699|ref|XP_004160484.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Cucumis sativus]
Length = 807
Score = 1497 bits (3875), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 712/808 (88%), Positives = 761/808 (94%), Gaps = 1/808 (0%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDG+QEAVHFDKITARLKKLSYGLSI+HCDPVLVSQKVC GVYKGVTTSQLDELA
Sbjct: 1 MYVVKRDGRQEAVHFDKITARLKKLSYGLSIDHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAAAMT NHPDYASLAARI VSNLHKNTKKSFS+TI+DMY H +ERSG KA LIADDV
Sbjct: 61 AETAAAMTANHPDYASLAARIAVSNLHKNTKKSFSDTIRDMYYHVSERSGQKAALIADDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y++IMKNAARLDSEIIYDRDFDYD+FGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK
Sbjct: 121 YEVIMKNAARLDSEIIYDRDFDYDFFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDIDSAIKTYH MSQRWFTHASPTLFN+GTPR QLSSCFL+CMK+DSIEGIYDTLKECA+
Sbjct: 181 DDIDSAIKTYHTMSQRWFTHASPTLFNSGTPRPQLSSCFLICMKEDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVS+HNIRA GSYIRGTNGTSNGI+PMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 241 ISKSAGGIGVSIHNIRAMGSYIRGTNGTSNGILPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFM+RVQSNG WSLFCPNEAPGLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMQRVQSNGEWSLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DCWG EFE+LY YE++GKAKKVV+AQNLWFEILKSQIETGTPYMLFKDTCN+KSNQQNL
Sbjct: 361 DCWGEEFEKLYIGYEQQGKAKKVVKAQNLWFEILKSQIETGTPYMLFKDTCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I+Y+SPTETAVCNL+SIALPR+VRE GV +ESHPSKLVGSR SKNRYF
Sbjct: 421 GTIKSSNLCTEIIEYSSPTETAVCNLSSIALPRFVREKGVSIESHPSKLVGSRDSKNRYF 480
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLAE+T +VT NLNKIIDVNYYPVETA+RSNLRHRPIGIGVQGLADTFILLGM FDS
Sbjct: 481 DFDKLAEITALVTTNLNKIIDVNYYPVETAKRSNLRHRPIGIGVQGLADTFILLGMSFDS 540
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQQLNKDIFE IYYHAL+ S E+AA EGPYETY GSPVSKGILQ DMWGV PS RWDW
Sbjct: 541 PEAQQLNKDIFEAIYYHALKASCELAAVEGPYETYAGSPVSKGILQFDMWGVTPSKRWDW 600
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
GLR I+++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 EGLRAQIAQHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
LHDLT+MGLW P +KNKIIY +GSVQ I +IP++L+AIYKTVWEIKQKTLVDMA DRGCY
Sbjct: 661 LHDLTDMGLWCPALKNKIIYANGSVQNIAEIPDDLRAIYKTVWEIKQKTLVDMAADRGCY 720
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIHMDQPNFGKLTSLHF+AW +GLKTGMYYLRS+AAADAIKFTVD S+LKE
Sbjct: 721 IDQSQSLNIHMDQPNFGKLTSLHFYAWSKGLKTGMYYLRSQAAADAIKFTVDPSLLKEKS 780
Query: 781 KVTDDDDAKMAQMVCSLTNREECMACGS 808
++DD KMAQMVCSLTNRE+CMACGS
Sbjct: 781 N-SEDDSTKMAQMVCSLTNREDCMACGS 807
>gi|242094852|ref|XP_002437916.1| hypothetical protein SORBIDRAFT_10g004780 [Sorghum bicolor]
gi|241916139|gb|EER89283.1| hypothetical protein SORBIDRAFT_10g004780 [Sorghum bicolor]
Length = 815
Score = 1495 bits (3871), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 708/815 (86%), Positives = 766/815 (93%), Gaps = 7/815 (0%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDG+QE VHFDKITARLKKLSYGLS +HCDPVLV+QKVC GVYKGVTTSQLDELA
Sbjct: 1 MYVVKRDGRQETVHFDKITARLKKLSYGLSQDHCDPVLVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAAAMT +HPDYASLAARI VSNLHKNTKKSFSETIKDMY H+NERSGL APL+A+DV
Sbjct: 61 AETAAAMTASHPDYASLAARIAVSNLHKNTKKSFSETIKDMYMHFNERSGLMAPLVAEDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+IIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLK+ GKVVERPQHMLMRV+VGIHK
Sbjct: 121 YEIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKLGGKVVERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI+SAI+TYH+MSQRWFTHASPTLFNAGTPR QLSSCFL+CMKDDSIEGIY+TLKECA+
Sbjct: 181 EDIESAIRTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLICMKDDSIEGIYETLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIFEFLDLRKNHGKEE+RARDLFYALWVPDLFM+RVQ+NG WSLFCPNEAPGLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEENRARDLFYALWVPDLFMQRVQNNGEWSLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DCWG EF+ LY KYE +GKAKKVV AQ LWF+ILK+QIETGTPYML+KDTCN+KSNQQNL
Sbjct: 361 DCWGEEFDNLYKKYESQGKAKKVVPAQTLWFDILKAQIETGTPYMLYKDTCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I++TSP ETAVCNLASIALPR+VRE GVP+ESHPSKLVGS SKNRYF
Sbjct: 421 GTIKSSNLCTEIIEFTSPNETAVCNLASIALPRFVREKGVPLESHPSKLVGSSDSKNRYF 480
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DFEKLAEVT VT NLNKIID+NYYPVETA+RSN+RHRPIGIGVQGLADTFILLGMPFDS
Sbjct: 481 DFEKLAEVTSTVTYNLNKIIDINYYPVETAKRSNMRHRPIGIGVQGLADTFILLGMPFDS 540
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQQLNKDIFETIYYH+L+ S+E+AA+EGPYETY GSPVSKGILQPDMW V PS+RW+W
Sbjct: 541 PEAQQLNKDIFETIYYHSLKASAELAAKEGPYETYEGSPVSKGILQPDMWDVVPSNRWNW 600
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+ ISK G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 PSLRETISKVGIRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
LHDLTEMG+W+P +KN+IIYDDGSVQKI +IP++LKAIYKTVWEIKQKTLVDMAVDRGCY
Sbjct: 661 LHDLTEMGIWTPTLKNQIIYDDGSVQKIAEIPDDLKAIYKTVWEIKQKTLVDMAVDRGCY 720
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLN+HM+Q NFGKLTSLHFHAW +GLKTGMYYLR+RAAADAIKFTVDT++LKEN
Sbjct: 721 IDQSQSLNVHMEQANFGKLTSLHFHAWSKGLKTGMYYLRTRAAADAIKFTVDTTLLKENG 780
Query: 781 KVT-------DDDDAKMAQMVCSLTNREECMACGS 808
V +D +AKMAQMVCSL NREECMACGS
Sbjct: 781 NVVSNGKPTEEDVEAKMAQMVCSLNNREECMACGS 815
>gi|186920362|gb|ACC95434.1| ribonucleotide diphosphate reductase large subunit 1 [Oryza sativa
Japonica Group]
Length = 814
Score = 1495 bits (3871), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 709/814 (87%), Positives = 765/814 (93%), Gaps = 6/814 (0%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDG+QE VHFDKITARLKKLSYGLS EHCDPVLV+QKVC GVYKGVTTSQLDELA
Sbjct: 1 MYVVKRDGRQETVHFDKITARLKKLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAAAMT +HPDYASLAARI VSNLHKNTKKSFSETIKDMY H+NERSGL APL+A DV
Sbjct: 61 AETAAAMTASHPDYASLAARIAVSNLHKNTKKSFSETIKDMYGHFNERSGLNAPLVAHDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y++IMKNA+RLDSEIIYDRDFDYDYFGFKTLERSYLLK+ GKVVERPQHMLMRV+VGIHK
Sbjct: 121 YEVIMKNASRLDSEIIYDRDFDYDYFGFKTLERSYLLKLGGKVVERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDI+SAIKTYH+MSQRWFTHASPTLFNAGT R QLSSCFL+CMKDDSIEGIYDTLKECA+
Sbjct: 181 DDIESAIKTYHLMSQRWFTHASPTLFNAGTTRPQLSSCFLICMKDDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFM+RVQ+N WSLFCPNEAPGLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMQRVQNNQEWSLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DCWG EFE+LYTKYE+EGKAKK+V AQ LWF+ILK+QIETGTPYML+KDTCN+KSNQQNL
Sbjct: 361 DCWGDEFEKLYTKYEREGKAKKIVPAQTLWFDILKAQIETGTPYMLYKDTCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I+YTSPTETAVCNLASIALPR+VRE GVP+ESHPSKLVGS SKNRYF
Sbjct: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKGVPIESHPSKLVGSSDSKNRYF 480
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLAEVT VT NLNKIID+NYYPVETA+RSN+RHRPIGIGVQGLADTFILLGMPFDS
Sbjct: 481 DFDKLAEVTSTVTYNLNKIIDINYYPVETAKRSNMRHRPIGIGVQGLADTFILLGMPFDS 540
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQQLNKDIFETIY+H+L+ S+E+A +EGPYETY GSPVSKGILQPDMW V PSDRW+W
Sbjct: 541 PEAQQLNKDIFETIYFHSLKASAELAGKEGPYETYEGSPVSKGILQPDMWNVVPSDRWNW 600
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR ISK G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 PSLRSTISKVGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
LHDLTEMG+W+P +KNKIIY+DGSVQK+ IP++LKAIYKTVWEIKQKTLVDMAVDRGCY
Sbjct: 661 LHDLTEMGVWTPALKNKIIYEDGSVQKMTVIPDDLKAIYKTVWEIKQKTLVDMAVDRGCY 720
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN- 779
ID SQSLN+HM+QPNFGKLTSLHFHAW +GLKTGMYYLR+RAAADAIKFTVDT++LK N
Sbjct: 721 IDQSQSLNVHMEQPNFGKLTSLHFHAWSKGLKTGMYYLRTRAAADAIKFTVDTALLKANG 780
Query: 780 ---PKVTDDDD--AKMAQMVCSLTNREECMACGS 808
K +++D AKMAQMVCSL NREEC+ACGS
Sbjct: 781 ENGTKAAEEEDVEAKMAQMVCSLNNREECLACGS 814
>gi|413953007|gb|AFW85656.1| hypothetical protein ZEAMMB73_966032 [Zea mays]
Length = 815
Score = 1487 bits (3849), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 704/815 (86%), Positives = 764/815 (93%), Gaps = 7/815 (0%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDG+QE VHFDKITARLKKLSYGLS +HCDPVLV+QKVC GVYKGVTTSQLDELA
Sbjct: 1 MYVVKRDGRQETVHFDKITARLKKLSYGLSQDHCDPVLVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAAAMT +HPDYASLAARI VSNLHKNTKKSFSETIKDMY H+N+RSGL APL+A+DV
Sbjct: 61 AETAAAMTASHPDYASLAARIAVSNLHKNTKKSFSETIKDMYMHFNKRSGLMAPLVAEDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+IIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLK+ GKVVERPQHMLMRV++GIHK
Sbjct: 121 YEIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKLDGKVVERPQHMLMRVSLGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI+SAI+TYH+MSQRWFTHASPTLFNAGTPR QLSSCFL+CMKDDSIEGIY+TLKECA+
Sbjct: 181 EDIESAIRTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLICMKDDSIEGIYETLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVSVHNIRATGSYIRGTNG+SNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGSSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIFEFLDLRKNHGKEE+RARDLFYALWVPDLFM+RVQ+NG WSLFCPNEAPGLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEENRARDLFYALWVPDLFMQRVQNNGEWSLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG EF+ LY KYE +GKAKKVV AQ LWF+ILK+QIETGTPYML+KDTCN+KSNQQNL
Sbjct: 361 DSWGEEFDNLYKKYESQGKAKKVVPAQTLWFDILKAQIETGTPYMLYKDTCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I++TSPTETAVCNLASIALPR+VRE VP+ESHPSKLVGS SKNRYF
Sbjct: 421 GTIKSSNLCTEIIEFTSPTETAVCNLASIALPRFVREKDVPLESHPSKLVGSSDSKNRYF 480
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DFEKLAEVT VT NLNKIID+NYYPVETA+RSN+RHRPIGIGVQGLADTFILLGMPFDS
Sbjct: 481 DFEKLAEVTSTVTYNLNKIIDINYYPVETAKRSNMRHRPIGIGVQGLADTFILLGMPFDS 540
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQQLNKDIFETIYYHAL+ S+E+AA+EGPYETY GSPVSKGILQPDMW V PS+RW+W
Sbjct: 541 PEAQQLNKDIFETIYYHALKASAELAAKEGPYETYEGSPVSKGILQPDMWDVVPSNRWNW 600
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+ ISK G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 PSLRETISKVGIRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
LHDLTEMG+W+P +KN+IIYDDGSVQKI +IP++LKAIYKTVWEIKQKTLVDMAVDRGCY
Sbjct: 661 LHDLTEMGIWTPTLKNQIIYDDGSVQKIAEIPDDLKAIYKTVWEIKQKTLVDMAVDRGCY 720
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN- 779
ID SQSLN+HM+Q NFGKLTSLHFHAW +GLKTGMYYLR+RAAADAIKFTVDT++LKEN
Sbjct: 721 IDQSQSLNVHMEQANFGKLTSLHFHAWSKGLKTGMYYLRTRAAADAIKFTVDTTLLKENG 780
Query: 780 ------PKVTDDDDAKMAQMVCSLTNREECMACGS 808
+D DAKMAQMVCSL NREEC+ACGS
Sbjct: 781 NGVSDGKPAEEDVDAKMAQMVCSLNNREECLACGS 815
>gi|47497381|dbj|BAD19419.1| putative ribonucleotide reductase [Oryza sativa Japonica Group]
gi|125584063|gb|EAZ24994.1| hypothetical protein OsJ_08774 [Oryza sativa Japonica Group]
gi|186920366|gb|ACC95436.1| ribonucleotide diphosphate reductase large subunit 2 [Oryza sativa
Japonica Group]
Length = 810
Score = 1485 bits (3845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 698/810 (86%), Positives = 761/810 (93%), Gaps = 2/810 (0%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDG+QEAVHFDKITARLK+LSYGLS EHCDPVLV+QKVC GVYKGVTTSQL ELA
Sbjct: 1 MYVVKRDGRQEAVHFDKITARLKRLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLGELA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAAAMT +HPDYASLAARI +SNLHK T KSFSETIK MY HY+ERSGL APLIADDV
Sbjct: 61 AETAAAMTASHPDYASLAARIAISNLHKTTMKSFSETIKVMYMHYDERSGLLAPLIADDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+IIMKN RLDSEIIYDRDFDYDYFGFKTLERSYLLKV GKVVERPQHMLMRV++GIHK
Sbjct: 121 YEIIMKNTTRLDSEIIYDRDFDYDYFGFKTLERSYLLKVVGKVVERPQHMLMRVSIGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDI+SAIKTYHMMSQRWFTHASPTLFNAGTPR QLSSCFL+CM DDSIEGIYDTL ECA
Sbjct: 181 DDIESAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLICMNDDSIEGIYDTLSECAT 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+HNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISKCAGGIGLSIHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIFEFLDLRKNHGKEE+RARDLFYALW+PDLFMERVQ+N WSLFCPNEAPGLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEENRARDLFYALWIPDLFMERVQNNENWSLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DCWG EF+ LY KYE+EGKAKKVV AQ LWF+ILK+QIETGTPYML+KD+CN+KSNQQNL
Sbjct: 361 DCWGDEFQNLYKKYEREGKAKKVVSAQALWFDILKAQIETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I++TSPTETAVCNLASI LPR+VRE GVPMESHP+KLVGS GSKNRYF
Sbjct: 421 GTIKSSNLCTEIIEFTSPTETAVCNLASIGLPRFVREKGVPMESHPAKLVGSNGSKNRYF 480
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLAE+T IVT NLNKIID NYYPVETA+RSN+RHRPIGIGVQGLADTFILLGMPFDS
Sbjct: 481 DFDKLAEITSIVTRNLNKIIDTNYYPVETAKRSNMRHRPIGIGVQGLADTFILLGMPFDS 540
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
TEAQQLNKDIFETIYYHAL+ S+EIAA+EGPYETY GSPVSKGILQPDMW V PSDRW+W
Sbjct: 541 TEAQQLNKDIFETIYYHALKASAEIAAKEGPYETYSGSPVSKGILQPDMWNVVPSDRWNW 600
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+MISK GVRNSLL+APMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 SDLREMISKVGVRNSLLIAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
LHDLTEMG+WSP++KNKI+Y+DGSVQKI +IP++LKAIY+TVWEIKQKT+VDMA+DRGCY
Sbjct: 661 LHDLTEMGIWSPVLKNKIVYEDGSVQKISEIPDDLKAIYRTVWEIKQKTIVDMAIDRGCY 720
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIHMDQPNFGKLTSLHFHAW +GLKTGMYYLR+RAAADAIKFTVDT++LK+
Sbjct: 721 IDQSQSLNIHMDQPNFGKLTSLHFHAWSKGLKTGMYYLRTRAAADAIKFTVDTTLLKDKQ 780
Query: 781 KVTDDDD--AKMAQMVCSLTNREECMACGS 808
+++D +KMA++VCSL NR+EC+ACGS
Sbjct: 781 HNAEEEDVQSKMAEVVCSLNNRDECLACGS 810
>gi|326502586|dbj|BAJ95356.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 812
Score = 1481 bits (3833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 698/812 (85%), Positives = 761/812 (93%), Gaps = 4/812 (0%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDG+QEAVHFDKITARLKKL+YGLS +HCDPVLV+QKVC GVY+GVTTSQLDELA
Sbjct: 1 MYVVKRDGRQEAVHFDKITARLKKLAYGLSQDHCDPVLVAQKVCAGVYRGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAAAMT +HPDYASLAARI VSNLHKNT KSFSET+K MY H+NERSGL APLIADDV
Sbjct: 61 AETAAAMTASHPDYASLAARIAVSNLHKNTMKSFSETVKVMYTHFNERSGLMAPLIADDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+IIMKNA RLDSEIIYDRDFDYD+FGFKTLERSYLLKV GKVVERPQHMLMRV+VGIHK
Sbjct: 121 YEIIMKNATRLDSEIIYDRDFDYDFFGFKTLERSYLLKVGGKVVERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDI+SA+KTYHMMSQRWFTHASPTLFNAGTPR QLSSCFLVCMKDDSIEGIYDTL ECA
Sbjct: 181 DDIESAVKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYDTLSECAS 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVS+HN+RATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISKSAGGIGVSIHNVRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADI+EFLDLRKNHGKEE+RARDLFYALW+PDLFMERVQ N WSLFCP+EAPGLA
Sbjct: 301 LEPWHADIYEFLDLRKNHGKEENRARDLFYALWIPDLFMERVQKNEQWSLFCPSEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DCWG EF+ LY KYE+EGKAKK+V AQ+LWFEILK+QIETGTPYML+KD+CN+KSNQQNL
Sbjct: 361 DCWGDEFQNLYNKYEREGKAKKIVSAQSLWFEILKAQIETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE++++TSPTETAVCNLASIALPR+VRE GVP+ESHP+KLVGS GSKNRYF
Sbjct: 421 GTIKSSNLCTEIVEFTSPTETAVCNLASIALPRFVREKGVPIESHPAKLVGSIGSKNRYF 480
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLAE+T +VT NLNKIID+NYYP+ETARRSN+RHRPIGIGVQGLADTFILLGMPFDS
Sbjct: 481 DFDKLAEITSVVTWNLNKIIDINYYPIETARRSNMRHRPIGIGVQGLADTFILLGMPFDS 540
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQQLNKDIFETIYYHAL+ S+EIAA+EGPYETY G PVSKGILQPDMW V PSDRWDW
Sbjct: 541 PEAQQLNKDIFETIYYHALKASAEIAAKEGPYETYDGCPVSKGILQPDMWNVVPSDRWDW 600
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
+R MISK G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 PAIRGMISKVGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
LHDLTEMG+WSP++KN IIYDDGSVQKI +IP++LKAIYKTVWEIKQKT+VDMAVDRGCY
Sbjct: 661 LHDLTEMGIWSPVLKNNIIYDDGSVQKITEIPDDLKAIYKTVWEIKQKTVVDMAVDRGCY 720
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE-- 778
ID SQSLNIHMDQ N GKLTSLHFH W +GLKTGMYYLR+RAAADAIKFTVDTS+LK+
Sbjct: 721 IDQSQSLNIHMDQANSGKLTSLHFHTWSKGLKTGMYYLRTRAAADAIKFTVDTSLLKDKK 780
Query: 779 --NPKVTDDDDAKMAQMVCSLTNREECMACGS 808
N + +D +AKMAQ+ CSL NRE+C+ACGS
Sbjct: 781 PANAEEEEDLEAKMAQVTCSLNNREDCLACGS 812
>gi|413943018|gb|AFW75667.1| hypothetical protein ZEAMMB73_410950 [Zea mays]
Length = 835
Score = 1477 bits (3824), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 707/835 (84%), Positives = 765/835 (91%), Gaps = 27/835 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDG+QE VHFDKITARLKKLSYGLS +HCDPVLV+QKVC GVYKGVTTSQLDELA
Sbjct: 1 MYVVKRDGRQETVHFDKITARLKKLSYGLSQDHCDPVLVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSET--------------------IKD 100
AETAAAMT +HPDYASLAARI VSNLHKNTKKSFSET IKD
Sbjct: 61 AETAAAMTASHPDYASLAARIAVSNLHKNTKKSFSETVKAGLVGLGCELECGRCGCRIKD 120
Query: 101 MYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQ 160
MY H+NERSGL APL+A+DVY+IIM NAARLDSEIIYDRDFDYDYFGFKTLERSYLLK+
Sbjct: 121 MYRHFNERSGLMAPLVAEDVYEIIMNNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKLG 180
Query: 161 GKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFL 220
GKVVERPQHMLMRV+VGIHK+DI+SAI+TYH+MSQRWFTHASPTLFNAGTPR QLSSCFL
Sbjct: 181 GKVVERPQHMLMRVSVGIHKEDIESAIRTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFL 240
Query: 221 VCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFN 280
+CMKDDSIEGIY+TLKECA+ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFN
Sbjct: 241 ICMKDDSIEGIYETLKECAVISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFN 300
Query: 281 DTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFME 340
DTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEE+RARDLFYALWVPDLFM+
Sbjct: 301 DTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEENRARDLFYALWVPDLFMQ 360
Query: 341 RVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIET 400
RVQSNG WSLFCPNEAPGLADCWG EF+ LY KYE +GKAKKVV AQ LWF+ILK+QIET
Sbjct: 361 RVQSNGEWSLFCPNEAPGLADCWGEEFDNLYKKYESQGKAKKVVPAQTLWFDILKAQIET 420
Query: 401 GTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGV 460
GTPYML+KDTCN+KSNQQNLGTIKSSNLCTE+I++TSPTETAVCNLASIALPR+VRE GV
Sbjct: 421 GTPYMLYKDTCNRKSNQQNLGTIKSSNLCTEIIEFTSPTETAVCNLASIALPRFVREKGV 480
Query: 461 PMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPI 520
P+ESHPSKLVGS SKNRYFDFEKLAEVT VT NLNKIID+NYYPVETA+RSN+RHRPI
Sbjct: 481 PLESHPSKLVGSSDSKNRYFDFEKLAEVTSTVTYNLNKIIDINYYPVETAKRSNMRHRPI 540
Query: 521 GIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPV 580
GIGVQGLADTFILLGMPFDS EA QLNKDIFETIYYHAL++S+E+A +EGPYETY GSPV
Sbjct: 541 GIGVQGLADTFILLGMPFDSLEAHQLNKDIFETIYYHALKSSAELAVKEGPYETYEGSPV 600
Query: 581 SKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYT 640
SKGILQPDMW V PS RW+W LR+ ISK G+RNSLLVAPMPTASTSQILGNNECFEPYT
Sbjct: 601 SKGILQPDMWNVVPSTRWNWPSLRETISKAGIRNSLLVAPMPTASTSQILGNNECFEPYT 660
Query: 641 SNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYK 700
SNIYSRRVLSGEFVVVNKHLLHDLTEMG+W+P +KN+IIYDDGSVQKI +IP++LKAIYK
Sbjct: 661 SNIYSRRVLSGEFVVVNKHLLHDLTEMGIWTPTLKNQIIYDDGSVQKIAEIPDDLKAIYK 720
Query: 701 TVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRS 760
TVWEIKQKTLVDMAVDRGCYID SQSLN+HM+Q NFGKLTSLHFHAW +GLKTGMYYLR+
Sbjct: 721 TVWEIKQKTLVDMAVDRGCYIDQSQSLNVHMEQANFGKLTSLHFHAWSKGLKTGMYYLRT 780
Query: 761 RAAADAIKFTVDTSVLKEN------PKVTDDD-DAKMAQMVCSLTNREECMACGS 808
RAAADAIKFTVDT++LKEN K T++D +AKMAQMVCS NREEC+ACGS
Sbjct: 781 RAAADAIKFTVDTTLLKENGNGMNDGKPTEEDVEAKMAQMVCSFNNREECLACGS 835
>gi|357125146|ref|XP_003564256.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Brachypodium distachyon]
Length = 814
Score = 1476 bits (3820), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 699/814 (85%), Positives = 760/814 (93%), Gaps = 6/814 (0%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDG+QE VHFDKITARLKKLSYGLS +HCDPVLV+QKVC GVYKGVTTSQLDELA
Sbjct: 1 MYVVKRDGRQETVHFDKITARLKKLSYGLSQDHCDPVLVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAAA+T +HPDYASLAARI VSNLHK+TKKSFSETIKDMY HYNERSGL APLIADD+
Sbjct: 61 AETAAALTASHPDYASLAARIAVSNLHKSTKKSFSETIKDMYLHYNERSGLMAPLIADDI 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y++IMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLK+ G VVERPQHMLMRV+VGIHK
Sbjct: 121 YEVIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKLGGIVVERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDIDSAI+TYH+MSQRWFTHASPTLFNAGTPR QLSSCFL+CMKDDSIEGIYDTLKECA+
Sbjct: 181 DDIDSAIRTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLICMKDDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIFEFLDLRKNHGKEE+RARDLF+ALWVPDLFM+RVQ+N WSLFCPNEAPGLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEENRARDLFFALWVPDLFMQRVQNNEEWSLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DCWG +FE LY KYE+EGKAKKV+ AQ LWF+ILK+QIETGTPYML+KDTCN+KSNQQNL
Sbjct: 361 DCWGEKFENLYKKYEREGKAKKVIPAQTLWFDILKAQIETGTPYMLYKDTCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I+YTSP ETAVCNLASIALPR+VR+ GVP+ESHPSKLVGS GS+NRYF
Sbjct: 421 GTIKSSNLCTEIIEYTSPEETAVCNLASIALPRFVRDKGVPIESHPSKLVGSNGSQNRYF 480
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EVT VT NLNKIID+NYYPVETA+RSN+RHRPIGIGVQGLADTF+LLGMPFDS
Sbjct: 481 DFDKLGEVTSTVTYNLNKIIDMNYYPVETAKRSNMRHRPIGIGVQGLADTFMLLGMPFDS 540
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQQLN+DIFETIYYHAL+ S+E+AA+EGPYETY GSPVSKG++QPDMW V PS RW+W
Sbjct: 541 PEAQQLNRDIFETIYYHALKASAELAAKEGPYETYEGSPVSKGVIQPDMWNVTPSSRWNW 600
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+ ISK GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 PTLRETISKVGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
LHDLTEMG+W+P +KNKIIY+DGSVQK+ +IP++LKAIYKTVWEIKQKTLVDMAVDRGCY
Sbjct: 661 LHDLTEMGIWTPALKNKIIYEDGSVQKMAEIPDDLKAIYKTVWEIKQKTLVDMAVDRGCY 720
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN- 779
ID SQSLN+HM+QPNF KLTSLHFHAW +GLKTGMYYLR+RAAADAIKFTVDT LK N
Sbjct: 721 IDQSQSLNVHMEQPNFAKLTSLHFHAWSKGLKTGMYYLRTRAAADAIKFTVDTGFLKVNG 780
Query: 780 -----PKVTDDDDAKMAQMVCSLTNREECMACGS 808
P DD +AKMAQ+ CSL NREEC+ACGS
Sbjct: 781 DTDTKPAEEDDVEAKMAQVACSLNNREECLACGS 814
>gi|357137493|ref|XP_003570335.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Brachypodium distachyon]
Length = 810
Score = 1468 bits (3801), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 694/810 (85%), Positives = 754/810 (93%), Gaps = 2/810 (0%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDG+QEAVHFDKITARLKKLSY LS +HCDPVLV+QKVC GVYKGVTTSQLDELA
Sbjct: 1 MYVVKRDGRQEAVHFDKITARLKKLSYSLSQDHCDPVLVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAAAMT +HPDYASLAARI VSNLHKNT KSFS+T+K MY H+NERSGL APLIADDV
Sbjct: 61 AETAAAMTASHPDYASLAARIAVSNLHKNTMKSFSDTVKVMYTHFNERSGLMAPLIADDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+IIMKNA RLDSEIIYDRDFDYDYFGFKTLERSYLLKV GKVVERPQHMLMRV+VGIHK
Sbjct: 121 YEIIMKNATRLDSEIIYDRDFDYDYFGFKTLERSYLLKVGGKVVERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDI+SA+KTYHMMSQRWFTHASPTLFNAGTPR QLSSCFL+CMKDDSIEGIYDTL ECA
Sbjct: 181 DDIESAVKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLICMKDDSIEGIYDTLSECAS 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVS+HNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISKSAGGIGVSIHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+FLDLRKNHGKEE+RARDLFYALW+PDLFMERVQ N WSLFCP+EAPGL+
Sbjct: 301 LEPWHADIFDFLDLRKNHGKEENRARDLFYALWIPDLFMERVQRNEQWSLFCPSEAPGLS 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DCWG EF+ LY KYE+EGKAKKVV AQ+LWF ILK+QIETGTPYML+KDTCN+KSNQQNL
Sbjct: 361 DCWGDEFQNLYKKYEREGKAKKVVSAQSLWFGILKAQIETGTPYMLYKDTCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I++TSPTETAVCNLASIALPR+VRE VP+ESHP+KLVGS GSKNRYF
Sbjct: 421 GTIKSSNLCTEIIEFTSPTETAVCNLASIALPRFVREKDVPIESHPAKLVGSNGSKNRYF 480
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLAE+T VT NLNKIID+NYYP+ETARRSN+RHRPIGIGVQGLADTFILLGMPFDS
Sbjct: 481 DFDKLAEITSTVTCNLNKIIDINYYPIETARRSNMRHRPIGIGVQGLADTFILLGMPFDS 540
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQQLNKDIFETIYYHAL+ S+ +AA+EGPYETY GSPVSKGILQPDMW V PSDRW+W
Sbjct: 541 PEAQQLNKDIFETIYYHALKASAGLAAKEGPYETYDGSPVSKGILQPDMWNVVPSDRWNW 600
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
+R+MIS G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 PAIREMISNVGIRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
LHDLTEMG+WSP +KN IIY+DGSVQKI +IP++LKAIYKTVWEIKQKT+VDMAVDRGCY
Sbjct: 661 LHDLTEMGIWSPALKNNIIYEDGSVQKISEIPDDLKAIYKTVWEIKQKTVVDMAVDRGCY 720
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIHMDQ N GKLTSLHFHAW +GLKTGMYYLR+RAAADAIKFTVDT LK+
Sbjct: 721 IDQSQSLNIHMDQANSGKLTSLHFHAWSKGLKTGMYYLRTRAAADAIKFTVDTGFLKDKQ 780
Query: 781 KVTDDDD--AKMAQMVCSLTNREECMACGS 808
+ + +D AKMAQ+ CSL NRE+C+ACGS
Sbjct: 781 QSREAEDLQAKMAQVACSLNNREDCLACGS 810
>gi|224082486|ref|XP_002306711.1| predicted protein [Populus trichocarpa]
gi|222856160|gb|EEE93707.1| predicted protein [Populus trichocarpa]
Length = 810
Score = 1457 bits (3773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 681/810 (84%), Positives = 749/810 (92%), Gaps = 2/810 (0%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG+QE V FDKITARLKKLSYGLS +HCDPVLV+QKVC GVY+GVTT+QLDELA
Sbjct: 1 MYVIKRDGRQEPVRFDKITARLKKLSYGLSNDHCDPVLVAQKVCAGVYRGVTTTQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA+MT NHPDYA LAARI VS LHKNTKKSFSETI+ MYN+ N+ SG KAPLIADDV
Sbjct: 61 AETAASMTANHPDYALLAARISVSRLHKNTKKSFSETIELMYNNLNKGSGQKAPLIADDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+IIMKNA RLDSEI+YDRDF+YDYFGFKTLERSYLLKV GK+VERPQH+LMRVAVGIHK
Sbjct: 121 YEIIMKNAERLDSEILYDRDFEYDYFGFKTLERSYLLKVDGKIVERPQHLLMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDI+SA KTYH+MSQ WFTHA+PTLFNAGT + QLSSCFL+CMKDDSIEGIYDTLKECA+
Sbjct: 181 DDIESATKTYHLMSQSWFTHATPTLFNAGTAQPQLSSCFLLCMKDDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG++VHNI ATGSYIRGTNGTSNGIVPMLRVFN+TARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISKLAGGIGIAVHNIHATGSYIRGTNGTSNGIVPMLRVFNNTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIFEFLDLRKNHGKEEHRARDLF ALW+PDLFMERV+ + WSLFCP+EAPGLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFLALWIPDLFMERVRGDDKWSLFCPSEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DCWG EFE+LYT+YE+E +AKK++ A+ LWFEIL SQIETGTPYMLFKD+CN+KSNQQNL
Sbjct: 361 DCWGQEFEKLYTQYEREDRAKKIISARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTEVI++TSPTETAVCNLAS+ALPR+V E GVP ES SK+VGSR SKNRYF
Sbjct: 421 GTIKSSNLCTEVIEFTSPTETAVCNLASVALPRFVMERGVPAESQSSKMVGSRESKNRYF 480
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DFEKLAEVT +T NLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS
Sbjct: 481 DFEKLAEVTTTITANLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
+EA++LNKDIFETIYYHALR+SSE+AA++GPYETY GSPVSKGILQ DMWGV PSDRWDW
Sbjct: 541 SEAKRLNKDIFETIYYHALRSSSELAAKDGPYETYCGSPVSKGILQMDMWGVTPSDRWDW 600
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+MISK+GVRNSLL+APMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVV+NKHL
Sbjct: 601 DALREMISKSGVRNSLLIAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVMNKHL 660
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L+DLTEMGLWSP++KNKII + GSV KIP+IPE+LKAIYKTVWEIKQKTLVDMA DRGCY
Sbjct: 661 LNDLTEMGLWSPVLKNKIINESGSVSKIPEIPEQLKAIYKTVWEIKQKTLVDMAADRGCY 720
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL-KEN 779
ID SQSLNIHM+QP+ GKLTSLHFHAW +GLKTGMYYLR+RAAADAIKFTVDT+VL EN
Sbjct: 721 IDQSQSLNIHMEQPDLGKLTSLHFHAWSKGLKTGMYYLRTRAAADAIKFTVDTTVLNNEN 780
Query: 780 P-KVTDDDDAKMAQMVCSLTNREECMACGS 808
K DD ++ MAQ CSL NREECMACGS
Sbjct: 781 ANKAEDDVNSDMAQAACSLQNREECMACGS 810
>gi|242063422|ref|XP_002453000.1| hypothetical protein SORBIDRAFT_04g036410 [Sorghum bicolor]
gi|241932831|gb|EES05976.1| hypothetical protein SORBIDRAFT_04g036410 [Sorghum bicolor]
Length = 810
Score = 1451 bits (3756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 679/810 (83%), Positives = 752/810 (92%), Gaps = 2/810 (0%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDG+QE+VHFDKITARL +LSYGLS EHCDPVLV+QKVC GVYKG+TT ++ ELA
Sbjct: 1 MYVVKRDGRQESVHFDKITARLTRLSYGLSAEHCDPVLVAQKVCAGVYKGITTGEIGELA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAAAMTT+HPDYASLAARI VSNLHKNT SFS T+K +Y HY+ERSGL APLIADDV
Sbjct: 61 AETAAAMTTSHPDYASLAARIAVSNLHKNTMTSFSATVKALYTHYDERSGLMAPLIADDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+ IIMKN ARL+ EI YDRDFDYDYFGFKTL+RSYLLK+ GKV ERPQHMLMRV+VGIHK
Sbjct: 121 FTIIMKNTARLECEINYDRDFDYDYFGFKTLQRSYLLKIGGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDI+SAIKTYHMMSQRWFTHASPTLFNAGTPR QLSSCFL+CMKDDSIEGIYDTL ECA
Sbjct: 181 DDIESAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLICMKDDSIEGIYDTLSECAA 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVS+HNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 241 ISKSAGGIGVSIHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIFEFLDL+KNHGKEE+RARDLFYALWVPDLFMERVQ N WSLFCP+EAPGLA
Sbjct: 301 LEPWHPDIFEFLDLKKNHGKEENRARDLFYALWVPDLFMERVQHNEQWSLFCPSEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DCWG EF+ LY KYE+EGKAKKVV AQ LWF+ILK+QIETGTPYML+KD CN+KSNQQNL
Sbjct: 361 DCWGDEFQNLYQKYEREGKAKKVVAAQALWFDILKAQIETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I+YTSP+ETAVCNLASIALPR+VRE GVP+ESHP+KLVGS GSKNRYF
Sbjct: 421 GTIKSSNLCTEIIEYTSPSETAVCNLASIALPRFVREKGVPIESHPAKLVGSSGSKNRYF 480
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLAE+T IVT NLNKIID++YYP+E ARRSN+RHRPIGIGVQGLADTFILLGMPFDS
Sbjct: 481 DFDKLAEITSIVTCNLNKIIDISYYPIENARRSNMRHRPIGIGVQGLADTFILLGMPFDS 540
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQQLNKDIFETIYYH+L+ S+E+AA+EGPYETY GSPVSKGILQPDMW V PS RW+W
Sbjct: 541 PEAQQLNKDIFETIYYHSLKASAELAAKEGPYETYAGSPVSKGILQPDMWNVVPSSRWNW 600
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
+R+MIS+ G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 SAIREMISQVGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
LHDL+EMG+WSP++KNKIIY+DGSVQKI ++P++LKAIYKTVWEIKQKT+VDMA+DRGCY
Sbjct: 661 LHDLSEMGVWSPVLKNKIIYEDGSVQKITEVPDDLKAIYKTVWEIKQKTIVDMAIDRGCY 720
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIHM+QPN GKLTSLHFH W +GLKTGMYYLR+RAAADAIKFTVDT++LK+
Sbjct: 721 IDQSQSLNIHMEQPNSGKLTSLHFHGWSKGLKTGMYYLRTRAAADAIKFTVDTTLLKDKQ 780
Query: 781 KVTDDDDA--KMAQMVCSLTNREECMACGS 808
++++DA KMAQ+ CSL NREEC+ACGS
Sbjct: 781 PTSEEEDAQVKMAQVACSLNNREECLACGS 810
>gi|255587584|ref|XP_002534320.1| ribonucleoside-diphosphate reductase large chain, putative [Ricinus
communis]
gi|223525502|gb|EEF28063.1| ribonucleoside-diphosphate reductase large chain, putative [Ricinus
communis]
Length = 776
Score = 1446 bits (3742), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 688/747 (92%), Positives = 718/747 (96%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDG+QE VHFDKITARLKKLSYGLS++HCDPVLVSQKVC GVYKGVTTSQLDELA
Sbjct: 1 MYVVKRDGRQETVHFDKITARLKKLSYGLSMDHCDPVLVSQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAAAMT NHPDYASLAARIVVSNLHKNTKKSFSETIK MYNH+NERSGLKAPLIADDV
Sbjct: 61 AETAAAMTANHPDYASLAARIVVSNLHKNTKKSFSETIKVMYNHFNERSGLKAPLIADDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+IIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK
Sbjct: 121 YNIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDIDS IKTYH+MSQRWFTHASPTLFNAGTPR QLSSCFLVCMKDDSIEGIYDTLKECA+
Sbjct: 181 DDIDSVIKTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKDDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVS+HNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 241 ISKSAGGIGVSIHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNG WS+FCPNEAPGLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGQWSVFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DCWG EFERLYT+YE+EGKAKKVVQAQNLWFEILKSQIETGTPYM+FKDT N+KSNQQNL
Sbjct: 361 DCWGEEFERLYTQYEREGKAKKVVQAQNLWFEILKSQIETGTPYMVFKDTSNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I+YTSPTETAVCNLASIALPR+VRE GVPMESHPSK+VGSRGSKNRYF
Sbjct: 421 GTIKSSNLCTEIIEYTSPTETAVCNLASIALPRFVREKGVPMESHPSKVVGSRGSKNRYF 480
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLAEVT +VT NLNKIIDVNYYPVE A+RSN RHRPIGIGVQGLAD FILLGM FDS
Sbjct: 481 DFDKLAEVTEVVTCNLNKIIDVNYYPVENAKRSNFRHRPIGIGVQGLADAFILLGMAFDS 540
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQQLNK+IFETIYYHAL+ SSEIA R+GPYETY GSPVSKGILQPDMWGV PS RW W
Sbjct: 541 PEAQQLNKEIFETIYYHALKASSEIAGRDGPYETYDGSPVSKGILQPDMWGVTPSSRWSW 600
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+MI KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 NALREMIFKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
LHDLTEMGLWSP +KNKIIY+DGSVQKIP+IP++LK IYKTVWEIKQKTLVDMAVDRGCY
Sbjct: 661 LHDLTEMGLWSPTLKNKIIYEDGSVQKIPEIPDDLKLIYKTVWEIKQKTLVDMAVDRGCY 720
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAW 747
ID SQSLNIHMDQPNFGKLTSLHF+AW
Sbjct: 721 IDQSQSLNIHMDQPNFGKLTSLHFYAW 747
>gi|297797920|ref|XP_002866844.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297312680|gb|EFH43103.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 807
Score = 1445 bits (3740), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 675/782 (86%), Positives = 739/782 (94%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDGKQE VHFDKITARLKKLSYGLSI+HCDPVLV+QKVC GVYKGVTTSQLDELA
Sbjct: 1 MYVVKRDGKQETVHFDKITARLKKLSYGLSIDHCDPVLVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAAAMT NHPDYASLAARI VSNLHKNTKKSFSET++DMY+H NERSGL +PLIA DV
Sbjct: 61 AETAAAMTANHPDYASLAARIAVSNLHKNTKKSFSETVRDMYSHVNERSGLASPLIAADV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+IIMK+A RLDSEIIYDRDF+YDYFGFKTLERSYLLKVQGKVVERPQHMLMRV+VGIHK
Sbjct: 121 YEIIMKHATRLDSEIIYDRDFEYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DIDSAIKTYH+MSQRWFTHASPTLFN+GTPRAQLSSCFL+CMKDDSIEGIYDTLKECA+
Sbjct: 181 EDIDSAIKTYHLMSQRWFTHASPTLFNSGTPRAQLSSCFLICMKDDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGVS+HNIRATGSYIRGTNG SNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 241 ISKSAGGIGVSIHNIRATGSYIRGTNGASNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+FL+LRKNHGKEEHRARDLFY LW+PDLFMERVQ++G WSLFCPNEAPGLA
Sbjct: 301 LEPWHADIFDFLELRKNHGKEEHRARDLFYGLWIPDLFMERVQTDGQWSLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DCWG EFERLYT+YE +GKAKKVVQAQ LW+EIL SQ+ETGTPYMLFKD+CN KSNQQNL
Sbjct: 361 DCWGAEFERLYTQYENQGKAKKVVQAQQLWYEILTSQVETGTPYMLFKDSCNSKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+++YTSPTETAVCNLASIALPR+VRE +P++SHPSK+VGS SKNRYF
Sbjct: 421 GTIKSSNLCTEILEYTSPTETAVCNLASIALPRFVRENDIPLDSHPSKIVGSLDSKNRYF 480
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLAEVT VT NLNKIIDVN+YPVETA+ SN+RHRPIGIGVQGLAD FILLGMPFDS
Sbjct: 481 DFDKLAEVTATVTVNLNKIIDVNHYPVETAKTSNMRHRPIGIGVQGLADAFILLGMPFDS 540
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
E+QQLNKDIFETIYYHAL++SSEIA +EG YETY GSPVSKGILQPDMW V PSDRWDW
Sbjct: 541 PESQQLNKDIFETIYYHALKSSSEIATKEGTYETYQGSPVSKGILQPDMWNVIPSDRWDW 600
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LRDMISKNG+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 AALRDMISKNGIRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
LHDLT+MGLWSP +KNKII+++GS+ + +IP++LKAIY+TVWEIKQ+T+VDMA DRGC+
Sbjct: 661 LHDLTDMGLWSPTLKNKIIHENGSIVNVKEIPDDLKAIYRTVWEIKQRTVVDMAADRGCF 720
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIHM++PNF KLTSLHF+AW +GLKTGMYYLRSR+AADAIKFTVDT++LKE P
Sbjct: 721 IDQSQSLNIHMEKPNFAKLTSLHFYAWKKGLKTGMYYLRSRSAADAIKFTVDTAMLKEKP 780
Query: 781 KV 782
V
Sbjct: 781 NV 782
>gi|255566650|ref|XP_002524309.1| ribonucleoside-diphosphate reductase large chain, putative [Ricinus
communis]
gi|223536400|gb|EEF38049.1| ribonucleoside-diphosphate reductase large chain, putative [Ricinus
communis]
Length = 810
Score = 1442 bits (3732), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 689/810 (85%), Positives = 750/810 (92%), Gaps = 2/810 (0%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG QE VHFDKITARLKKLSYGL+ E+CDPVLV+QKVC+G YKGVTT+QLDELA
Sbjct: 1 MYVIKRDGHQETVHFDKITARLKKLSYGLNSEYCDPVLVAQKVCSGFYKGVTTTQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAAAMTTNHPDYA LAAR+ VSNLHKNTKKSFSETIK MY+H N+RSG KA LIADDV
Sbjct: 61 AETAAAMTTNHPDYAILAARVAVSNLHKNTKKSFSETIKLMYSHINKRSGQKASLIADDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+IIMKNA RLDSEIIYDRDFDYDYFGFKTLERSYLLK+ GK+VERPQHMLMRVA+GIHK
Sbjct: 121 YEIIMKNATRLDSEIIYDRDFDYDYFGFKTLERSYLLKIDGKIVERPQHMLMRVAIGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD++SA+KTYH+M+QRWFTHA+PTLFNAGTP+ QLSSCFL CMKDDSIEGI+DTLKECA+
Sbjct: 181 DDVESAVKTYHLMAQRWFTHATPTLFNAGTPQPQLSSCFLGCMKDDSIEGIFDTLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+SVHN+RATGS+I GTNG SNGIVPMLRVFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISKVAGGIGLSVHNVRATGSFICGTNGESNGIVPMLRVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIFEFLDLRKNHGKEE RARDLFYALW+PDLFMERV+ +G WSLFCPNEAPGLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEERRARDLFYALWIPDLFMERVRGDGSWSLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DCWG EFE+LYT YE +AKKV+ A+ LWFEIL SQIETGTPYMLFKD+CN+KSNQQNL
Sbjct: 361 DCWGEEFEKLYTFYEDGDRAKKVIPARKLWFEILNSQIETGTPYMLFKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTEVI++TSPTETAVCNLASIALPR+VRE GVP+ SH SKLVGSR SK RYF
Sbjct: 421 GTIKSSNLCTEVIEFTSPTETAVCNLASIALPRFVRERGVPIGSHSSKLVGSRDSKTRYF 480
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KLAE+T +T NLNKIID+NYYPV+TARRSNLRHRP+GIGVQGLADTFILLGMPFDS
Sbjct: 481 DFAKLAEITVTITANLNKIIDINYYPVDTARRSNLRHRPMGIGVQGLADTFILLGMPFDS 540
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQQLNKDIFETIYYHAL++SSE+AA +GPYETY GSPVSKGILQ DMWGV PSDRWDW
Sbjct: 541 LEAQQLNKDIFETIYYHALKSSSELAAIDGPYETYKGSPVSKGILQMDMWGVIPSDRWDW 600
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 NVLREMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
LHDLTE+GLWS +KNKIIY++GSV K+P+IPE+LKAIYKTVWEIKQKTLVDMAV RGCY
Sbjct: 661 LHDLTEIGLWSHALKNKIIYENGSVAKVPEIPEQLKAIYKTVWEIKQKTLVDMAVARGCY 720
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK-EN 779
ID SQSLNIHMDQP+ GKLTSLHF+AW +GLKTGMYYLR+RAAADAIKFTVDTSVLK EN
Sbjct: 721 IDQSQSLNIHMDQPDLGKLTSLHFYAWSKGLKTGMYYLRTRAAADAIKFTVDTSVLKHEN 780
Query: 780 PKVTDD-DDAKMAQMVCSLTNREECMACGS 808
T+D D MAQMVCSL NREECMACGS
Sbjct: 781 VNSTNDYVDTDMAQMVCSLRNREECMACGS 810
>gi|168022742|ref|XP_001763898.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684903|gb|EDQ71302.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 811
Score = 1414 bits (3660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 661/811 (81%), Positives = 741/811 (91%), Gaps = 3/811 (0%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG+QEAVHFDKITARLKKLSYGL+ EHC+PVLV+QKVC GVYKGVTTSQLDELA
Sbjct: 1 MYVIKRDGRQEAVHFDKITARLKKLSYGLNPEHCEPVLVAQKVCMGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAAAMT NHPDYA LAARI VSNLHKNTKKSFSET+KDMY H NERSGLK+PLIADDV
Sbjct: 61 AETAAAMTANHPDYAILAARIAVSNLHKNTKKSFSETVKDMYYHVNERSGLKSPLIADDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YDII+KNA RLDSEIIYDRDFDYDYFGFKTLERSYLLKV GKVVERPQHMLMRV+VGIHK
Sbjct: 121 YDIIIKNAPRLDSEIIYDRDFDYDYFGFKTLERSYLLKVNGKVVERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
++I++ +KTYHMMSQRWFTHASPTLFNAGTPR QLSSCFL+CMK+DSIEGIYDTLKECA+
Sbjct: 181 ENIEAVLKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLLCMKNDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+SVHNIR TGSYIRGTNGTSNGI+PMLRVFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISKSAGGIGLSVHNIRTTGSYIRGTNGTSNGIIPMLRVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIFE+LDLRKNHGKEE RARDLFY LW+PDLFM+RVQ+NG WSLFCPNEAPGLA
Sbjct: 301 LEPWHADIFEWLDLRKNHGKEESRARDLFYGLWIPDLFMQRVQNNGTWSLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DCWG +FE LY +YE EG+AKKVVQAQ LWF +L++QIETG PY+LFKD CN+KSNQQNL
Sbjct: 361 DCWGEQFETLYARYELEGRAKKVVQAQKLWFAVLEAQIETGNPYILFKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE++++TSP ETAVCNLAS+ALPR+VRE GV +ESHP+K++GS G +NR+F
Sbjct: 421 GTIKSSNLCTEIVEFTSPDETAVCNLASLALPRFVREKGVSLESHPTKIIGSNGHENRFF 480
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL E+T +VT NLN+IIDVNYYPVETARRSN+RHRPIG+GVQGLAD FILLGMPFDS
Sbjct: 481 DFNKLGEITSLVTRNLNRIIDVNYYPVETARRSNMRHRPIGLGVQGLADAFILLGMPFDS 540
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQQLN+DIFETIYYHAL+TS E+AA EG YETY GSP+SKG LQPDMW V PS RWDW
Sbjct: 541 EEAQQLNRDIFETIYYHALKTSCELAAEEGVYETYAGSPISKGALQPDMWNVKPSTRWDW 600
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR MI NGVRNSLL+APMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 DSLRQMILNNGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L+DLT MGLW+ +KN++IY +GS+Q+I IP++LK IY+TVWEIKQ+++VDMA RG +
Sbjct: 661 LNDLTNMGLWTHDLKNQVIYHNGSIQQIDVIPDDLKKIYRTVWEIKQRSIVDMAAARGAF 720
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK-EN 779
ID SQSLNIHMDQPNFGKLTSLHF+ W +GLKTGMYYLRSRAAADAIKFTVD S +K E
Sbjct: 721 IDQSQSLNIHMDQPNFGKLTSLHFYTWTKGLKTGMYYLRSRAAADAIKFTVDQSSIKQET 780
Query: 780 PK--VTDDDDAKMAQMVCSLTNREECMACGS 808
P V+++ + KM+QMVCSL N++ECM+CGS
Sbjct: 781 PAAVVSNNLEEKMSQMVCSLENKDECMSCGS 811
>gi|168046427|ref|XP_001775675.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672948|gb|EDQ59478.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 813
Score = 1412 bits (3656), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 660/813 (81%), Positives = 738/813 (90%), Gaps = 5/813 (0%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG+QE+VHFDKITARLKKLSYGL+ EHC+PVLV+QKVC GVYKGVTTSQLDELA
Sbjct: 1 MYVIKRDGRQESVHFDKITARLKKLSYGLNPEHCEPVLVAQKVCMGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAAAMT NHPDYA LAARI VSNLHKNTKKSFSET+KDMY H N RSGLK+PLI DDV
Sbjct: 61 AETAAAMTANHPDYAILAARIAVSNLHKNTKKSFSETVKDMYRHVNARSGLKSPLIDDDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YD+I+KNAA LDSEIIYDRDFDYDYFGFKTLERSYLL+V GKVVERPQHMLMRV+VGIHK
Sbjct: 121 YDLIIKNAALLDSEIIYDRDFDYDYFGFKTLERSYLLRVNGKVVERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D+ID+ +KTYH MSQRWFTHASPTLFNAGTPR QLSSCFLVC K DSIEGIYDTLKECA+
Sbjct: 181 DNIDAVLKTYHTMSQRWFTHASPTLFNAGTPRPQLSSCFLVCTKGDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+SVHNIRATGSYIRGTNGTSNGI+PMLRVFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISKSAGGIGLSVHNIRATGSYIRGTNGTSNGIIPMLRVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF++LDLRKNHGKEE+RARDLFY LW+PDLFM RVQ NG+WSLFCPNEAPGLA
Sbjct: 301 LEPWHADIFDWLDLRKNHGKEENRARDLFYGLWIPDLFMRRVQENGVWSLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DCWG EFE+LYT+YE EGKAKKVVQAQ LWF +L++QIETG PY+LFKD CN+KSNQQNL
Sbjct: 361 DCWGEEFEKLYTRYEVEGKAKKVVQAQKLWFAVLEAQIETGNPYILFKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE++++TSP ETAVCNLASIALPR+VRE GVPM+SHP+K++GS G ++RYF
Sbjct: 421 GTIKSSNLCTEIVEFTSPDETAVCNLASIALPRFVRERGVPMDSHPTKVIGSNGYESRYF 480
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DFEKL E+T +VT NLN+IIDVNYYPVE ARRSN+RHRPIG+GVQGLAD FILLGMPFDS
Sbjct: 481 DFEKLGEITSLVTRNLNRIIDVNYYPVEAARRSNMRHRPIGLGVQGLADAFILLGMPFDS 540
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ+LN+DIFETIYYHALRTS E+AA EG YETY G P+SKG+LQPDMW V PS RWDW
Sbjct: 541 EEAQKLNRDIFETIYYHALRTSCELAAEEGVYETYDGCPISKGLLQPDMWDVKPSSRWDW 600
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR MI+KNGVRNSLL+APMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL
Sbjct: 601 DALRRMIAKNGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L+DLT++GLW+ +KN+IIY +GS+Q+I IP LK IY+TVWEIKQ+ +VDMA RG +
Sbjct: 661 LNDLTDLGLWTQDLKNQIIYHNGSIQQIDAIPAGLKKIYRTVWEIKQRAIVDMAAARGAF 720
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN- 779
ID SQSLNIHMDQPNFGKLTSLHF++W +GLKTGMYYLRSRAAADAIKFTVD S +K
Sbjct: 721 IDQSQSLNIHMDQPNFGKLTSLHFYSWTKGLKTGMYYLRSRAAADAIKFTVDQSSIKTKQ 780
Query: 780 ----PKVTDDDDAKMAQMVCSLTNREECMACGS 808
+ +D + K++QMVCSL N+EECM+CGS
Sbjct: 781 ATPAAAIAEDLEVKLSQMVCSLENKEECMSCGS 813
>gi|302805775|ref|XP_002984638.1| hypothetical protein SELMODRAFT_156827 [Selaginella moellendorffii]
gi|300147620|gb|EFJ14283.1| hypothetical protein SELMODRAFT_156827 [Selaginella moellendorffii]
Length = 803
Score = 1400 bits (3624), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 650/808 (80%), Positives = 739/808 (91%), Gaps = 5/808 (0%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDGKQEAVHFDKITARLKKLSY L+ ++CDPV+V+QKVC GVYKGVTTSQLDELA
Sbjct: 1 MYVIKRDGKQEAVHFDKITARLKKLSYSLNPDYCDPVIVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA+MTT+HPDYA LAARIVVSNLHK TKKSFSET+K+MY+H +ERSGLKAPLIA+DV
Sbjct: 61 AETAASMTTSHPDYAILAARIVVSNLHKKTKKSFSETVKEMYSHVDERSGLKAPLIANDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YDIIMKNAA+LDSEIIYDRDFDYDYFGFKTLERSYLLKV G+VVERPQHMLMRV+VGIHK
Sbjct: 121 YDIIMKNAAKLDSEIIYDRDFDYDYFGFKTLERSYLLKVNGRVVERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI++AIKTYH+MSQRWFTHASPTLFNAGTPR QLSSCFL+CMK+DSIEGIYDTLKECA+
Sbjct: 181 EDIEAAIKTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLLCMKEDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+SVHNIRAT SYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISKSAGGIGLSVHNIRATNSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+F++LDL+KNHGKEE+RARDLFY LW+PDLFMERV+SN WSLFCPNEAPGLA
Sbjct: 301 LEPWHADVFDWLDLKKNHGKEENRARDLFYGLWIPDLFMERVRSNSDWSLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DCWG EFE LYT+YE+EG+AK+ + AQ LWF IL+SQ+ETG PYM+FKDTCN+KSNQQNL
Sbjct: 361 DCWGEEFESLYTRYEREGRAKRSLSAQKLWFAILESQMETGNPYMVFKDTCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YTSP+ETAVCNLASIALPR+VRE G+ E +KLVGS+G KNR F
Sbjct: 421 GTIKCSNLCTEIVEYTSPSETAVCNLASIALPRFVREQGINSE---TKLVGSKGCKNRVF 477
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KLAEVT +VTENLNKIID+NYYPV+TA+RSNLRHRPIGIGVQGLAD FILLG+PFDS
Sbjct: 478 DFHKLAEVTTVVTENLNKIIDINYYPVDTAKRSNLRHRPIGIGVQGLADAFILLGLPFDS 537
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+ LNKDIFETIYYHA++TSS +A G YETY GSPVSKG+ QPDMW V PS RWDW
Sbjct: 538 EEARDLNKDIFETIYYHAMKTSSILAELYGVYETYPGSPVSKGVFQPDMWNVIPSGRWDW 597
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++M++++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEFVVVNKHL
Sbjct: 598 AALKEMVARHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFVVVNKHL 657
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L+DLT++G+W+P +KNK++ +GS+Q I IP++LK IY+TVWEIKQ+T+VDMAV+RG Y
Sbjct: 658 LNDLTDLGIWTPDLKNKVMAYNGSIQSIEGIPDDLKQIYRTVWEIKQRTIVDMAVERGAY 717
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIHM+QP KLTSLHFHAW GLKTGMYYLRS+AAADAIKFTVDT+ LK
Sbjct: 718 IDQSQSLNIHMEQPTTTKLTSLHFHAWSGGLKTGMYYLRSQAAADAIKFTVDTASLKSPT 777
Query: 781 KVTDDDDAKMAQMVCSLTNREECMACGS 808
K TD++ +AQMVCSL NRE C+ACGS
Sbjct: 778 KTTDEE--LLAQMVCSLENRENCLACGS 803
>gi|307103606|gb|EFN51865.1| hypothetical protein CHLNCDRAFT_32953 [Chlorella variabilis]
Length = 810
Score = 1315 bits (3404), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 615/815 (75%), Positives = 703/815 (86%), Gaps = 16/815 (1%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKR G V FDKITAR+ KLSYGL+ + CDPVLV+QKV TGVYKGVTTS+LDELA
Sbjct: 1 MYVVKRSGVLAPVSFDKITARISKLSYGLNPDFCDPVLVAQKVTTGVYKGVTTSELDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA++T HPDYA LAARI VSNLHKNT KSFSET+K M++H N ++G KAPLI + V
Sbjct: 61 AETAASLTATHPDYALLAARIAVSNLHKNTLKSFSETVKLMFSHVNPKNGEKAPLIDEKV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+IIM++A RLDSEI+YDRDFDYDYFGFKTLERSY+L+V G+VVERPQHMLMRVAVGIH
Sbjct: 121 YEIIMEHAERLDSEIVYDRDFDYDYFGFKTLERSYMLRVNGRVVERPQHMLMRVAVGIHL 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+D+D+A++TYH++SQRWFTHASPTLFNAGTPR QLSSCFLVCMK+DSIEGIYDTLKECA
Sbjct: 181 EDVDAAVETYHLLSQRWFTHASPTLFNAGTPRPQLSSCFLVCMKNDSIEGIYDTLKECAS 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+S+HNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISKSAGGIGLSMHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAMY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
EPWHADIF++LDLRKNHGKEE RARDLFYALW+PDLFM RV++NG WSLFCPNE+PGLA
Sbjct: 301 CEPWHADIFDWLDLRKNHGKEEARARDLFYALWIPDLFMHRVEANGEWSLFCPNESPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DCWG EFE LY++YE+EG+A+KV++AQ LWF IL++Q+ETG P+ML+KD+ N+KSNQQNL
Sbjct: 361 DCWGEEFEALYSRYEREGRARKVIKAQQLWFAILEAQVETGNPFMLYKDSANRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I+Y+SP ETAVCNLAS+ALPR+VRE P KLVGS ++ RYF
Sbjct: 421 GTIKSSNLCTEIIEYSSPEETAVCNLASVALPRFVREKE-PSGREGKKLVGSLDAEGRYF 479
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLAEVT + T NLNKIIDVNYYPVETARRSN+RHRPIG+GVQGLADTF+LLG+PFDS
Sbjct: 480 DFDKLAEVTAVATRNLNKIIDVNYYPVETARRSNMRHRPIGLGVQGLADTFLLLGLPFDS 539
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA +LN+ IFETIY+ ALRTS +++ EGPY TY GSPVSKGILQPDMWGV PSDRWDW
Sbjct: 540 PEAAELNRQIFETIYFAALRTSMQLSKAEGPYSTYEGSPVSKGILQPDMWGVKPSDRWDW 599
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
GLR I++NGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVLSGEFVVVN+HL
Sbjct: 600 DGLRRDIAQNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYVRRVLSGEFVVVNQHL 659
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
LHDLT +GLW +KN+I+ GSV + IP LK +YKTVWEIKQ+ LVDMA DRG +
Sbjct: 660 LHDLTRLGLWDTDVKNEIVAASGSVADL-DIPNNLKELYKTVWEIKQRVLVDMAADRGAF 718
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL---- 776
ID SQS N+HM PNFGKLTSLHF+AW +GLKTGMYYLRSRAAADAIKFTVD L
Sbjct: 719 IDQSQSFNVHMSDPNFGKLTSLHFYAWKKGLKTGMYYLRSRAAADAIKFTVDQQALQRRK 778
Query: 777 -----KENPKVTDDDDAKMAQMVCSLTNREECMAC 806
KEN +D MA MVCSL N++ C+ C
Sbjct: 779 SERLAKENKATSD-----MAAMVCSLENKDACVMC 808
>gi|302793891|ref|XP_002978710.1| hypothetical protein SELMODRAFT_109545 [Selaginella moellendorffii]
gi|300153519|gb|EFJ20157.1| hypothetical protein SELMODRAFT_109545 [Selaginella moellendorffii]
Length = 786
Score = 1292 bits (3344), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 608/777 (78%), Positives = 692/777 (89%), Gaps = 28/777 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDGKQEAVHFDKITARLKKLSY L+ ++CDPV+V+QKVC GVYKGVTTSQLDELA
Sbjct: 1 MYVIKRDGKQEAVHFDKITARLKKLSYSLNPDYCDPVIVAQKVCAGVYKGVTTSQLDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA+MTT+HPDYA LAARIVVSNLHK TKKSFSET+K+MY+H +ERSGLKAPLIA+DV
Sbjct: 61 AETAASMTTSHPDYAILAARIVVSNLHKKTKKSFSETVKEMYSHVDERSGLKAPLIANDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YDIIMKNAA+LDSEIIYDRDFDYDYFGFKTLERSYLLKV G+VVERPQHMLMRV+VGIHK
Sbjct: 121 YDIIMKNAAKLDSEIIYDRDFDYDYFGFKTLERSYLLKVNGRVVERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI++AIKTYH+MSQRWFTHASPTLFNAGTPR QLSSCFL+CMK+DSIEGIYDTLKECA+
Sbjct: 181 EDIEAAIKTYHLMSQRWFTHASPTLFNAGTPRPQLSSCFLLCMKEDSIEGIYDTLKECAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+SVHNIRAT SYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK
Sbjct: 241 ISKSAGGIGLSVHNIRATNSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK------ 294
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
D+F++LDL+KNHGKEE+RARDLFY LW+PDLFMERV+SN WSLFCPNEAPGLA
Sbjct: 295 ------DVFDWLDLKKNHGKEENRARDLFYGLWIPDLFMERVRSNSDWSLFCPNEAPGLA 348
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DCWG EFE LYT+YE+EG+AK+ + AQ LWF IL+SQ+ETG PYM+FKDTCN+KSNQQNL
Sbjct: 349 DCWGEEFESLYTRYEREGRAKRSLSAQKLWFAILESQMETGNPYMVFKDTCNRKSNQQNL 408
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YTSP+ETAVCNLASIALPR+VRE G+ E +KLV
Sbjct: 409 GTIKCSNLCTEIVEYTSPSETAVCNLASIALPRFVREQGINSE---TKLV---------- 455
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+VT +VTENLNKIID+NYYPV+TA+RSNLRHRPIGIGVQGLAD FILLG+PFDS
Sbjct: 456 ---DCFQVTTVVTENLNKIIDINYYPVDTAKRSNLRHRPIGIGVQGLADAFILLGLPFDS 512
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+ LNKDIFETIYYHA++TSS +A G YETY GSPVSKG+ QPDMW V PS RWDW
Sbjct: 513 EEARDLNKDIFETIYYHAMKTSSVLAELYGVYETYPGSPVSKGVFQPDMWNVIPSGRWDW 572
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++M++++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEFVVVNKHL
Sbjct: 573 PALKEMVARHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFVVVNKHL 632
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L+DLT++G+W+P +KNK++ +GS+Q I IP++LK IY+TVWEIKQ+T+VDMAV+RG Y
Sbjct: 633 LNDLTDLGIWTPDLKNKVMAYNGSIQSIEGIPDDLKQIYRTVWEIKQRTIVDMAVERGAY 692
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
ID SQSLNIHM+QP KLTSLHFHAW GLKTGMYYLRS+AAADAIKFTVDT+ LK
Sbjct: 693 IDQSQSLNIHMEQPTTTKLTSLHFHAWSGGLKTGMYYLRSQAAADAIKFTVDTASLK 749
>gi|384246529|gb|EIE20019.1| NSG5 protein [Coccomyxa subellipsoidea C-169]
Length = 847
Score = 1289 bits (3335), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 614/849 (72%), Positives = 705/849 (83%), Gaps = 43/849 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG++EAV FDKITAR+ KLSYGL+ + CDPVLV+QKV TGVYKGVTTS+LD+LA
Sbjct: 1 MFVQKRDGRREAVSFDKITARVTKLSYGLNTDFCDPVLVAQKVTTGVYKGVTTSELDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA+MT HPDYA+LAARI +SNLHKNT KSFSET+K MY+H N ++G +PLIA DV
Sbjct: 61 AETAASMTATHPDYATLAARIAISNLHKNTLKSFSETMKLMYSHVNPKNGEASPLIARDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
++I++++A RLDSEIIY+RDFDYDYFGFKTLERSYLL++ G VVERPQHMLMRVAVGIHK
Sbjct: 121 FEIVLQHAERLDSEIIYNRDFDYDYFGFKTLERSYLLRINGAVVERPQHMLMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI++AI+TYH +S+RWFTHASPTLFNAGTPR QLSSCFL+ MK+DSIEGIYDTLKECA
Sbjct: 181 EDIEAAIRTYHYLSERWFTHASPTLFNAGTPRPQLSSCFLIAMKNDSIEGIYDTLKECAA 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+S+HNIRA GSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISKSAGGIGLSIHNIRAVGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF++LDLRKNHGKEE RARDLFY LW DLFMERV+SN WSLFCPNEAPGLA
Sbjct: 301 LEPWHADIFDWLDLRKNHGKEEARARDLFYGLWTTDLFMERVESNADWSLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DCWG E LYT+YE+EG+AK+V++AQ LWF IL++Q+ETG PYMLFKD+CN+KSNQQNL
Sbjct: 361 DCWGDEHAALYTRYEREGRAKRVIKAQQLWFAILEAQVETGNPYMLFKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREM-GVPMESHPSKLVGSRGSKNRY 479
GTIK SNLCTE++++TSP ETAVCNLASIALPRYVRE G P P KL GS + NRY
Sbjct: 421 GTIKCSNLCTEIVEFTSPEETAVCNLASIALPRYVREREGTPSSGRP-KLAGSLNAPNRY 479
Query: 480 FDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFD 539
FDFEKL EVT I+TENLNKIID+N+YP ETARRSN+RHRPIGIGVQGLADTFILLGMPFD
Sbjct: 480 FDFEKLQEVTHIITENLNKIIDINFYPAETARRSNMRHRPIGIGVQGLADTFILLGMPFD 539
Query: 540 STEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVN-PSDRW 598
S EA+QLNK+IFETIY+ AL S +A +GPYETY GSPVSKG+LQ DMW V PS RW
Sbjct: 540 SAEAKQLNKEIFETIYFAALEKSCSLAKTDGPYETYAGSPVSKGVLQHDMWEVQPPSQRW 599
Query: 599 DWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNK 658
DW LR I+++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVLSGEF VVN+
Sbjct: 600 DWDTLRASIAQHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYVRRVLSGEFTVVNQ 659
Query: 659 HLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRG 718
HLL DL GLWS KN+++ +GSVQ + IP++LKA+YKTVWE+KQ+TLVDMA DRG
Sbjct: 660 HLLSDLVASGLWSADTKNELVAANGSVQGL-DIPDDLKALYKTVWELKQRTLVDMAADRG 718
Query: 719 CYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD------ 772
+ID SQS N+HM PNFGKLTSLHF+AW GLKTGMYYLR+RAAADAIKFTVD
Sbjct: 719 AFIDQSQSFNVHMSDPNFGKLTSLHFYAWKAGLKTGMYYLRTRAAADAIKFTVDQQALTK 778
Query: 773 ------------------TSVLKE----------NPKVTDDDDA-----KMAQMVCSLTN 799
T LKE + KV D+ ++A MVCSL N
Sbjct: 779 KKAARAAKSAADLAASSVTVALKERNGSPSRQFASVKVAALDEEMQKERELAAMVCSLEN 838
Query: 800 REECMACGS 808
++ C+ CGS
Sbjct: 839 KDACLMCGS 847
>gi|145340510|ref|XP_001415366.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575589|gb|ABO93658.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 817
Score = 1274 bits (3296), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 596/821 (72%), Positives = 696/821 (84%), Gaps = 20/821 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
+YVVKRDG++E V FDKITAR+KKL+YGLS E CDPV+V+QKVC GV+ GVTT +LDELA
Sbjct: 4 LYVVKRDGREEPVAFDKITARIKKLAYGLSQEFCDPVIVAQKVCMGVFAGVTTKELDELA 63
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA+MT+ HPDYA LAARI VSNLHK TKKSFSET+ MY H NER+G +PL+ADDV
Sbjct: 64 AETAASMTSKHPDYAQLAARIAVSNLHKTTKKSFSETMTQMYEHVNERNGKWSPLLADDV 123
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+II NA RLD+EI+YDRDF+YDYFG+KTLERSYLL++ GKVVERPQH+LMRV++GIHK
Sbjct: 124 YEIIKANAERLDAEIVYDRDFEYDYFGYKTLERSYLLRIDGKVVERPQHLLMRVSIGIHK 183
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI+ A+ TYHM+S+RW THASPTLFNAGTPR QLSSCFL+ MK+DSIEGIYDTLKECA
Sbjct: 184 EDIEKAVDTYHMLSERWMTHASPTLFNAGTPRPQLSSCFLIAMKEDSIEGIYDTLKECAC 243
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+S+H+IRAT SYIRGTNGTSNGI+PMLRVFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 244 ISKSAGGIGLSIHDIRATSSYIRGTNGTSNGIIPMLRVFNDTARYVDQGGGKRKGAFAIY 303
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWHADIF++LDLRKNHGKEE RARDLFY LW DLFM+RV++NG W+L CPNE PGLA
Sbjct: 304 IEPWHADIFDWLDLRKNHGKEEARARDLFYGLWTNDLFMKRVEANGDWTLMCPNECPGLA 363
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DCWG EFE LY KYE EGK KK ++AQ LWF IL+SQ+ETG PYMLFKD CN+KSNQQNL
Sbjct: 364 DCWGEEFETLYQKYEAEGKGKKTIKAQQLWFAILESQVETGNPYMLFKDACNRKSNQQNL 423
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPS---------KLVG 471
GTIKSSNLCTE++++TSP ETAVCNLASIALPR+V +E++PS KLVG
Sbjct: 424 GTIKSSNLCTEIVEFTSPEETAVCNLASIALPRFV------IENNPSSPTGRTEVKKLVG 477
Query: 472 SRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTF 531
S +K RYFD +KL E+T VT NLN+IIDVNYYPVETA+RSN+RHRPIG+GVQGLAD F
Sbjct: 478 SLKAKERYFDHDKLFEITRKVTRNLNRIIDVNYYPVETAKRSNMRHRPIGLGVQGLADVF 537
Query: 532 ILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWG 591
ILLG+ FDS EAQ+LN +IFETIY+ AL S+ +A EGPY TY GSPVSKGILQPDMWG
Sbjct: 538 ILLGLAFDSPEAQKLNAEIFETIYFAALTESNALAVVEGPYTTYEGSPVSKGILQPDMWG 597
Query: 592 VNP---SDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRV 648
+ DR DW GLR I+++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRV
Sbjct: 598 LTQMPGGDRHDWAGLRAAIAQHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYARRV 657
Query: 649 LSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQK 708
LSGEF VVN+HLL DLTE+GLW P +KN +I ++GSV + +IPE LKAIYKTVWEIKQ+
Sbjct: 658 LSGEFTVVNQHLLSDLTELGLWDPELKNSLIANNGSVADL-EIPENLKAIYKTVWEIKQR 716
Query: 709 TLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIK 768
LVDMA DRG +ID SQS N+HM PN GKLTSLHF+AW +GLKTGMYYLRSRAAADAIK
Sbjct: 717 ILVDMAADRGAFIDQSQSFNVHMSDPNSGKLTSLHFYAWKKGLKTGMYYLRSRAAADAIK 776
Query: 769 FTVDTSVLKENPKVTDDDDAKM-AQMVCSLTNREECMACGS 808
FTVD + ++ +A + A++ CSLTN+++C+ CG+
Sbjct: 777 FTVDVKQKQVTKMSEEEKEAYLAAKLQCSLTNKDDCVMCGA 817
>gi|255070623|ref|XP_002507393.1| ribonucleoside-diphosphate reductase [Micromonas sp. RCC299]
gi|226522668|gb|ACO68651.1| ribonucleoside-diphosphate reductase [Micromonas sp. RCC299]
Length = 841
Score = 1271 bits (3290), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 605/841 (71%), Positives = 697/841 (82%), Gaps = 35/841 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDG+QE VHFDKITAR+ KL+YGL+ E CDPVLV+QKV GVYKGVTTS+LDELA
Sbjct: 3 MYVVKRDGRQEPVHFDKITARINKLAYGLNQEFCDPVLVAQKVAVGVYKGVTTSELDELA 62
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA+MT+ HPDYA LAARI VSNLHKNT KSFSET+K MY H N+R+G +PL+ADDV
Sbjct: 63 AETAASMTSKHPDYAQLAARIAVSNLHKNTLKSFSETMKVMYEHVNKRNGKWSPLLADDV 122
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+II +NA R DSEI+YDRDFDYDYFG+KTLERSYLL+V GK+VERPQH+LMRVA+GIHK
Sbjct: 123 YEIIKENADRFDSEIVYDRDFDYDYFGYKTLERSYLLRVDGKIVERPQHLLMRVAIGIHK 182
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D ++ AI TYHM+S+RW THASPTLFN+GTPR QLSSCFL+ MK+DSIEGIYDTLKECA
Sbjct: 183 D-VEKAIDTYHMLSERWMTHASPTLFNSGTPRPQLSSCFLIAMKEDSIEGIYDTLKECAC 241
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+S+H+IRAT SYIRGTNGTSNGI+PMLRVFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 242 ISKSAGGIGLSIHDIRATSSYIRGTNGTSNGIIPMLRVFNDTARYVDQGGGKRKGAFAIY 301
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF++LDLRKNHGKEE RARDLFY LW DLFM+RV++NG W+LFCPNEAPGLA
Sbjct: 302 LEPWHADIFDWLDLRKNHGKEEARARDLFYGLWTNDLFMKRVEANGEWTLFCPNEAPGLA 361
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DCWG EFE LY KYE EGK KK V+AQ LWF IL+SQ+ETG PYMLFKD CN+KSNQQNL
Sbjct: 362 DCWGEEFEALYEKYEAEGKGKKTVKAQQLWFAILESQVETGNPYMLFKDACNRKSNQQNL 421
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVRE---MGVPMESHPSKLVGSRGSKN 477
GTI+SSNLCTE+++YTSP ETAVCNLASIALPR+V E + KL GS G+ N
Sbjct: 422 GTIRSSNLCTEIVEYTSPEETAVCNLASIALPRFVIENNPQSPTGRTEAKKLRGSIGAAN 481
Query: 478 RYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMP 537
RYFD +KLAE+T VT NLN+IIDVNYYPVETARRSN++HRPIG+GVQGLAD FILLGMP
Sbjct: 482 RYFDHDKLAEITRKVTRNLNRIIDVNYYPVETARRSNMKHRPIGLGVQGLADVFILLGMP 541
Query: 538 FDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP--- 594
FDS EA++LN +IFETIY+ AL S++IA R+G YE+Y GSPVS G+LQPDMWG+
Sbjct: 542 FDSPEAKKLNAEIFETIYFAALTESNDIAKRDGTYESYPGSPVSNGVLQPDMWGLTEMPG 601
Query: 595 SDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFV 654
DR DW GLR IS++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF
Sbjct: 602 GDRHDWTGLRTKISEHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYARRVLSGEFT 661
Query: 655 VVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMA 714
VVN+HLL DLTEMGLW P +KN++I ++GSVQ + IP+ LK IYKTVWEIKQ+ LVDMA
Sbjct: 662 VVNQHLLSDLTEMGLWDPSLKNELIANNGSVQSL-DIPDNLKEIYKTVWEIKQRILVDMA 720
Query: 715 VDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTS 774
DRG +ID SQS N+HM N GKLTSLHF+AW +GLKTGMYYLRSRAAADA+KFTVD +
Sbjct: 721 ADRGAFIDQSQSFNVHMSDANSGKLTSLHFYAWKKGLKTGMYYLRSRAAADAVKFTVDPN 780
Query: 775 VL--------------KENPKVTDDDDAK-------------MAQMVCSLTNREECMACG 807
+ KEN + K A++ CSL N++EC+ CG
Sbjct: 781 SVKAKNASSKKEVVGDKENQPANGEGAKKGPVDPDMEEEALMAAKIACSLANKDECVMCG 840
Query: 808 S 808
+
Sbjct: 841 A 841
>gi|303273186|ref|XP_003055954.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226462038|gb|EEH59330.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 816
Score = 1266 bits (3276), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 599/818 (73%), Positives = 693/818 (84%), Gaps = 12/818 (1%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDG+QE VHFDKITAR+ KL+YGL+ +HCDPVLV+QKV +GVYKGVTTS+LDELA
Sbjct: 1 MYVVKRDGRQEPVHFDKITARINKLAYGLNQDHCDPVLVAQKVASGVYKGVTTSELDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA+MT+ HPDYA LAARI VSNLHKNT KSFSET+K M+ H N+R+G +PL+ADDV
Sbjct: 61 AETAASMTSKHPDYAQLAARIAVSNLHKNTLKSFSETMKVMHEHVNKRNGKWSPLLADDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+II NAA D+EI+YDRDFDYDYFG+KTLERSYLL+V GK+VERPQH+LMRVA+GIHK
Sbjct: 121 YEIIKANAATFDAEIVYDRDFDYDYFGYKTLERSYLLRVDGKIVERPQHLLMRVAIGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D ++ AI TYHM+S+RW THASPTLFN+GTPR QLSSCFL+ MK+DSIEGIYDTLKECA
Sbjct: 181 D-VEKAIDTYHMLSERWMTHASPTLFNSGTPRPQLSSCFLIAMKEDSIEGIYDTLKECAC 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+S+H+IRAT SYIRGTNGTSNGI+PMLRVFNDTARYVDQGGGKRKGAFAVY
Sbjct: 240 ISKSAGGIGLSIHDIRATSSYIRGTNGTSNGIIPMLRVFNDTARYVDQGGGKRKGAFAVY 299
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF++LDLRKNHGKEE RARDLFY LW DLFM RV+SNG W+L CPNE PGLA
Sbjct: 300 LEPWHADIFDWLDLRKNHGKEEARARDLFYGLWTNDLFMRRVESNGDWTLMCPNECPGLA 359
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG EFE+LYT YE++GK KK ++AQ LWF IL++Q+ETG PYMLFKD CN KSNQQNL
Sbjct: 360 DSWGAEFEKLYTSYEEQGKGKKTIKAQQLWFAILEAQVETGNPYMLFKDACNSKSNQQNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPM---ESHPSKLVGSRGSKN 477
GTI+SSNLCTE++++TSP ETAVCNLASIALPR+V E + KL GS G+ +
Sbjct: 420 GTIRSSNLCTEIVEFTSPEETAVCNLASIALPRFVVEENPASPTGRTEAKKLRGSLGAAS 479
Query: 478 RYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMP 537
R FD KLAE+T VT NLN+IIDVNYYPVETARRSN+RHRPIG+GVQGLAD FILLG+
Sbjct: 480 RTFDHAKLAEITRKVTRNLNRIIDVNYYPVETARRSNMRHRPIGLGVQGLADVFILLGLA 539
Query: 538 FDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP--- 594
FDS EAQ+LN +IFETIY+ AL S+ IAA +G YETY GSPVSKGILQPDMWGV
Sbjct: 540 FDSPEAQKLNAEIFETIYFAALTESNAIAAVDGHYETYPGSPVSKGILQPDMWGVTEMPG 599
Query: 595 SDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFV 654
DR DW LR I+ +GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF
Sbjct: 600 GDRHDWAALRAKIATSGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYARRVLSGEFT 659
Query: 655 VVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMA 714
VVN+HLL+DLTE+GLW P +KN++I ++GSVQ + IP+ LKAIYKTVWEIKQ+ LVDMA
Sbjct: 660 VVNQHLLNDLTELGLWDPKLKNELIANNGSVQGL-DIPDHLKAIYKTVWEIKQRVLVDMA 718
Query: 715 VDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTS 774
DRG +ID SQS N+HM N GKLTSLHF+AW +GLKTGMYYLRSRAAADA+KFTVD +
Sbjct: 719 ADRGAFIDQSQSFNVHMSDANSGKLTSLHFYAWKKGLKTGMYYLRSRAAADAVKFTVDQA 778
Query: 775 VLKENPKVTDDD---DAKM-AQMVCSLTNREECMACGS 808
K D D +A+M A++ CSL N++EC+ CG+
Sbjct: 779 GKGNAQKSADPDMEEEARMAAKLACSLANKDECVMCGA 816
>gi|302844064|ref|XP_002953573.1| hypothetical protein VOLCADRAFT_82353 [Volvox carteri f.
nagariensis]
gi|300261332|gb|EFJ45546.1| hypothetical protein VOLCADRAFT_82353 [Volvox carteri f.
nagariensis]
Length = 824
Score = 1262 bits (3265), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 606/822 (73%), Positives = 699/822 (85%), Gaps = 15/822 (1%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG+QE V FDKITAR+ KL+YGL+ + CD VLV+QKV GVYKGVTTS+LDELA
Sbjct: 4 MYVIKRDGRQEPVMFDKITARIVKLAYGLNPDFCDAVLVAQKVAGGVYKGVTTSELDELA 63
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAAA+T+ HPDYA LAARI VSNLHK TKKSFSET++ +YN+ N R+G +A LI +V
Sbjct: 64 AETAAALTSTHPDYAILAARIAVSNLHKKTKKSFSETMEALYNYKNPRTGQEASLIDKEV 123
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+ II++NAARL+SEI YDRDFD+DYFGFKTLERSYLL++ G+VVERPQ MLMRVAVGIHK
Sbjct: 124 FQIIIQNAARLNSEIRYDRDFDFDYFGFKTLERSYLLRMNGEVVERPQQMLMRVAVGIHK 183
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDI+SAI+TYH MS+RWFTHASPTLFN+GTPR QLSSCFL+CM+DDSI+GIYDTLKECA+
Sbjct: 184 DDIESAIQTYHAMSERWFTHASPTLFNSGTPRPQLSSCFLLCMRDDSIDGIYDTLKECAV 243
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+S+H IRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 244 ISKSAGGIGLSIHCIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAIY 303
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWHAD+FEFLDLRKNHGKEE RARDLFY LW+PDLFMERV+++ WSLFCPNEA LA
Sbjct: 304 IEPWHADVFEFLDLRKNHGKEEARARDLFYGLWIPDLFMERVEADKEWSLFCPNEAQDLA 363
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+CWG +FERLYT+YE+EG+A+KVV+AQ LWF IL++Q+ETG PYML+KD+CNKKSNQQNL
Sbjct: 364 ECWGADFERLYTQYEREGRARKVVRAQQLWFAILEAQVETGNPYMLYKDSCNKKSNQQNL 423
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+I+YTSP E AVCNLASIALPR+VRE G KLVGS + NR+F
Sbjct: 424 GTIKCSNLCTEIIEYTSPDEIAVCNLASIALPRFVRERGSQPGWESKKLVGSLDAPNRFF 483
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DFEKLAE+T + T NLNKIIDVNYYP A++SN+RHRPIG+GVQGLADTFI+LGMPFDS
Sbjct: 484 DFEKLAEMTQMATRNLNKIIDVNYYPHPKAQKSNMRHRPIGLGVQGLADTFIILGMPFDS 543
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPS---DR 597
EA +LN+ IFE IYY AL S E+A R+G YETY GSPVS+GILQPDMWGV P+ R
Sbjct: 544 PEAAELNRQIFEVIYYAALSASCELAERDGTYETYEGSPVSQGILQPDMWGVKPTGVGSR 603
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
DW LRD I+++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVLSGEF VVN
Sbjct: 604 CDWPALRDRIARHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYVRRVLSGEFTVVN 663
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
+HLLHDL MGLWSP +KN+++ +GSV + IP ELKA+YKTVWEIKQ+TLVDMA DR
Sbjct: 664 QHLLHDLNRMGLWSPELKNELVAANGSVADL-DIPVELKALYKTVWEIKQRTLVDMAADR 722
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
G YID SQS N+ M PNFGKLTSLHF+AW +GLKTGMYYLR++AAADAIKFTVD L
Sbjct: 723 GAYIDQSQSFNVFMPDPNFGKLTSLHFYAWRKGLKTGMYYLRTKAAADAIKFTVDQQALS 782
Query: 778 E----NPKVT-------DDDDAKMAQMVCSLTNREECMACGS 808
NP T A++A MVCSL N+E C+ CGS
Sbjct: 783 RKKASNPPPTLSLPTGKFSVGAQLAAMVCSLENKEACLMCGS 824
>gi|159485006|ref|XP_001700540.1| ribonucleoside-diphosphate reductase large subunit [Chlamydomonas
reinhardtii]
gi|158272180|gb|EDO97984.1| ribonucleoside-diphosphate reductase large subunit [Chlamydomonas
reinhardtii]
Length = 878
Score = 1242 bits (3214), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 594/798 (74%), Positives = 686/798 (85%), Gaps = 6/798 (0%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG+QE V FDKITAR+ KL+YGL+ + CD VLV+QKV GVYKGVTTS+LDELA
Sbjct: 4 MYVLKRDGRQEPVMFDKITARIVKLAYGLNPDFCDAVLVAQKVAGGVYKGVTTSELDELA 63
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAAA+T+ HPDYA LAARI VSNLHKNT+KSFS+T+ +Y + N R+G +A LIA DV
Sbjct: 64 AETAAALTSTHPDYAILAARIAVSNLHKNTEKSFSKTMDKLYTYRNPRNGEEAALIAKDV 123
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YDII++NA RLDSEI YDRDFDYDYFGFKTLERSYLL++ GKVVERPQHMLMRVAVGIHK
Sbjct: 124 YDIIVQNAQRLDSEIRYDRDFDYDYFGFKTLERSYLLRIDGKVVERPQHMLMRVAVGIHK 183
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI+SAI TYH MS+RWFTHASPTLFN GTPR QLSSCFL+ M+DDSI+GIYDTLKECA+
Sbjct: 184 EDIESAITTYHAMSERWFTHASPTLFNGGTPRPQLSSCFLLAMRDDSIDGIYDTLKECAV 243
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+S+H IR TGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 244 ISKSAGGIGLSIHCIRGTGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAIY 303
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWHAD+F+FLDLRKNHGKEE RARDLFY LW+PDLFMERV+++ WSLFCPNEAPGLA
Sbjct: 304 MEPWHADVFDFLDLRKNHGKEEARARDLFYGLWIPDLFMERVEADKEWSLFCPNEAPGLA 363
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DCWG EFERLY KYE+EG++++VV+AQ LWF IL++Q+ETG PYML+KD CN+KSNQQNL
Sbjct: 364 DCWGEEFERLYLKYEQEGRSRRVVRAQQLWFAILEAQVETGNPYMLYKDHCNRKSNQQNL 423
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+I+YTSP E AVCNLASIALPR+VRE G KLVGS + NR+F
Sbjct: 424 GTIKCSNLCTEIIEYTSPDEIAVCNLASIALPRFVRERGSQPGWESKKLVGSLDAANRFF 483
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DFEKLAE+T +VT NLNKIIDVNYYP A+RSN+RHRPIG+GVQGLADTFILLGM FDS
Sbjct: 484 DFEKLAEMTKMVTRNLNKIIDVNYYPHPKAQRSNMRHRPIGLGVQGLADTFILLGMAFDS 543
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPS---DR 597
EA +LN+ IFE +Y+ AL TS E+A R+GPYETY GSPVS+G+LQPDMWGV P+ R
Sbjct: 544 PEAAELNRQIFEVVYHAALSTSCELAERDGPYETYAGSPVSQGVLQPDMWGVKPTGVDGR 603
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
+W LR+ I+++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVLSGEF VVN
Sbjct: 604 CNWEELRNRIAQHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYVRRVLSGEFTVVN 663
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
+HLLHDL MG+WS +KN+++ +GSV ++ +IPEELK +YKTVWEIKQ+TLVDMA DR
Sbjct: 664 QHLLHDLNRMGIWSADLKNELVAANGSVLEL-EIPEELKGLYKTVWEIKQRTLVDMAADR 722
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL- 776
G YID SQS N+ M PNFGKLTSLHF+AW +GLKTGMYYLR++AAADAIKFTVD L
Sbjct: 723 GAYIDQSQSFNVFMPDPNFGKLTSLHFYAWRKGLKTGMYYLRTKAAADAIKFTVDQQALS 782
Query: 777 -KENPKVTDDDDAKMAQM 793
K+ + T A QM
Sbjct: 783 KKKTTQGTSAATAATPQM 800
>gi|52000447|dbj|BAD44751.1| NSG5 protein [Chlamydomonas reinhardtii]
Length = 878
Score = 1241 bits (3210), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 593/798 (74%), Positives = 686/798 (85%), Gaps = 6/798 (0%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG+QE V FDKITAR+ KL+YGL+ + CD VLV+QKV GVYKGVTTS+LDELA
Sbjct: 4 MYVLKRDGRQEPVMFDKITARIVKLAYGLNPDFCDAVLVAQKVAGGVYKGVTTSELDELA 63
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAAA+T+ HPDYA LAARI VSNLHKNT+KSFS+T+ +Y + N R+G +A LIA DV
Sbjct: 64 AETAAALTSTHPDYAILAARIAVSNLHKNTEKSFSKTMDKLYTYRNPRNGEEAALIAKDV 123
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YDII++NA RLDSEI YDRDFDYDYFGFKTLERSYLL++ GKVVERPQHMLMRVAVGIHK
Sbjct: 124 YDIIVQNAQRLDSEIRYDRDFDYDYFGFKTLERSYLLRIDGKVVERPQHMLMRVAVGIHK 183
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI++AI TYH MS+RWFTHASPTLFN GTPR QLSSCFL+ M+DDSI+GIYDTLKECA+
Sbjct: 184 EDIEAAITTYHAMSERWFTHASPTLFNGGTPRPQLSSCFLLAMRDDSIDGIYDTLKECAV 243
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+S+H IR TGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 244 ISKSAGGIGLSIHCIRGTGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAIY 303
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWHAD+F+FLDLRKNHGKEE RARDLFY LW+PDLFMERV+++ WSLFCPNEAPGLA
Sbjct: 304 MEPWHADVFDFLDLRKNHGKEEARARDLFYGLWIPDLFMERVEADKEWSLFCPNEAPGLA 363
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DCWG EFERLY KYE+EG++++VV+AQ LWF IL++Q+ETG PYML+KD CN+KSNQQNL
Sbjct: 364 DCWGEEFERLYLKYEQEGRSRRVVRAQQLWFAILEAQVETGNPYMLYKDHCNRKSNQQNL 423
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+I+YTSP E AVCNLASIALPR+VRE G KLVGS + NR+F
Sbjct: 424 GTIKCSNLCTEIIEYTSPDEIAVCNLASIALPRFVRERGSQPGWESKKLVGSLDAANRFF 483
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DFEKLAE+T +VT NLNKIIDVNYYP A+RSN+RHRPIG+GVQGLADTFILLGM FDS
Sbjct: 484 DFEKLAEMTKMVTRNLNKIIDVNYYPHPKAQRSNMRHRPIGLGVQGLADTFILLGMAFDS 543
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPS---DR 597
EA +LN+ IFE +Y+ AL TS E+A R+GPYETY GSPVS+G+LQPDMWGV P+ R
Sbjct: 544 PEAAELNRQIFEVVYHAALSTSCELAERDGPYETYAGSPVSQGVLQPDMWGVKPTGVDGR 603
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
+W LR+ I+++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVLSGEF VVN
Sbjct: 604 CNWEELRNRIAQHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYVRRVLSGEFTVVN 663
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
+HLLHDL MG+WS +KN+++ +GSV ++ +IPEELK +YKTVWEIKQ+TLVDMA DR
Sbjct: 664 QHLLHDLNRMGIWSADLKNELVAANGSVLEL-EIPEELKGLYKTVWEIKQRTLVDMAADR 722
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL- 776
G YID SQS N+ M PNFGKLTSLHF+AW +GLKTGMYYLR++AAADAIKFTVD L
Sbjct: 723 GAYIDQSQSFNVFMPDPNFGKLTSLHFYAWRKGLKTGMYYLRTKAAADAIKFTVDQQALS 782
Query: 777 -KENPKVTDDDDAKMAQM 793
K+ + T A QM
Sbjct: 783 KKKTTQGTSAATAATPQM 800
>gi|412993613|emb|CCO14124.1| Ribonucleoside-diphosphate reductase subunit [Bathycoccus prasinos]
Length = 816
Score = 1211 bits (3134), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 578/808 (71%), Positives = 664/808 (82%), Gaps = 40/808 (4%)
Query: 37 VLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSE 96
VLV+QKVC GVY GVTT++LDELAAETAAAMT+ HPDYA LAARI VSNLHK T KSFS
Sbjct: 13 VLVAQKVCQGVYPGVTTAELDELAAETAAAMTSKHPDYAQLAARIAVSNLHKTTDKSFST 72
Query: 97 TIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYL 156
T+K MY H N R+G +PL+ADDVY+II +NA R D+EI+YDRDFDYDYFGFKTLERSYL
Sbjct: 73 TMKKMYEHTNHRNGKWSPLLADDVYEIITENAERFDAEIVYDRDFDYDYFGFKTLERSYL 132
Query: 157 LKVQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLS 216
L++ GKVVERPQHMLMRV++GIHK DI+ A+ TYHM+S+RW THASPTLFNAGTPR QLS
Sbjct: 133 LRIDGKVVERPQHMLMRVSIGIHKKDIEKAVDTYHMLSERWMTHASPTLFNAGTPRPQLS 192
Query: 217 SCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPML 276
SCFL+CMK+DSIEGIYDTLKECA ISKSAGGIG+S+H+IRAT SYIRGTNGTSNGI+PML
Sbjct: 193 SCFLICMKEDSIEGIYDTLKECACISKSAGGIGLSIHDIRATSSYIRGTNGTSNGIIPML 252
Query: 277 RVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPD 336
RVFNDTARYVDQGGGKRKGAFA+YLEPWH+DIF++LDLRKNHGKEE RARDLFY LW D
Sbjct: 253 RVFNDTARYVDQGGGKRKGAFAIYLEPWHSDIFDWLDLRKNHGKEEARARDLFYGLWTND 312
Query: 337 LFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKS 396
LFM+RV+ NG W+L CPNE PGL++CWG EFE LYTKYEKE K KK + AQ LWF IL++
Sbjct: 313 LFMKRVEENGKWTLMCPNECPGLSECWGEEFEALYTKYEKENKGKKTINAQQLWFAILEA 372
Query: 397 QIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVR 456
Q+ETG PYMLFKD CN+KSNQQNLGTIKSSNLCTE++++TSP ETAVCNLASIALPR+V
Sbjct: 373 QVETGNPYMLFKDACNRKSNQQNLGTIKSSNLCTEIVEFTSPEETAVCNLASIALPRFVI 432
Query: 457 EMGVPMESHPS------KLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETA 510
E ES P+ KL+GS + +RYFD KL+E+T VT NLN+IIDVNYYPVETA
Sbjct: 433 EKN---ESSPTGKTETKKLLGSLRASDRYFDHAKLSEITRKVTRNLNRIIDVNYYPVETA 489
Query: 511 RRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREG 570
+RSN++HRPIG+GVQGLAD FILLG+PFDS EAQ+LN +IFETIY+ AL+ S+E+A EG
Sbjct: 490 KRSNMKHRPIGLGVQGLADVFILLGLPFDSPEAQKLNAEIFETIYFAALQESNELAKEEG 549
Query: 571 PYETYHGSPVSKGILQPDMWGVNP---SDRWDWGGLRDMISKNGVRNSLLVAPMPTASTS 627
YE+Y GSPVSKG+LQPDMWGV DR W LR+ I+K+GVRNSLLVAPMPTASTS
Sbjct: 550 TYESYEGSPVSKGVLQPDMWGVTEMPGGDRHGWSALRESIAKHGVRNSLLVAPMPTASTS 609
Query: 628 QILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQK 687
QILGNNECFEPYTSNIY+RRVLSGEF VVN+HLL DLTEMGLW P +KN +I D+GSV
Sbjct: 610 QILGNNECFEPYTSNIYARRVLSGEFTVVNQHLLSDLTEMGLWDPTLKNSLISDNGSVVN 669
Query: 688 IPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAW 747
+ IP+ LKAIYKTVWEIKQ+ LVDMA RG +ID SQS N+HM N GKLTSLHFHAW
Sbjct: 670 L-DIPDNLKAIYKTVWEIKQRILVDMAAARGAFIDQSQSFNVHMSDANSGKLTSLHFHAW 728
Query: 748 LRGLKTGMYYLRSRAAADAIKFTVDTS-----VLKEN--------PKVT----------- 783
GLKTGMYYLRSRAAADAIKFTVD + V KEN PK T
Sbjct: 729 KSGLKTGMYYLRSRAAADAIKFTVDPTKAAKKVEKENVLKPSNGGPKPTAVPTKKEVSEM 788
Query: 784 --DDDDAKM-AQMVCSLTNREECMACGS 808
+ +A M A++ CSL N++EC+ CGS
Sbjct: 789 SEAEQEAHMAAKLKCSLENKDECLMCGS 816
>gi|312130871|ref|YP_003998211.1| ribonucleoside-diphosphate reductase subunit alpha [Leadbetterella
byssophila DSM 17132]
gi|311907417|gb|ADQ17858.1| ribonucleoside-diphosphate reductase, alpha subunit [Leadbetterella
byssophila DSM 17132]
Length = 820
Score = 1180 bits (3052), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 555/836 (66%), Positives = 668/836 (79%), Gaps = 44/836 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+VVKRDG++E+V FDKITAR+++L YGL PV V+ KV G+Y GVTTS+LD LA
Sbjct: 1 MFVVKRDGRRESVKFDKITARIERLCYGLDPYFVQPVEVAMKVVAGIYDGVTTSELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA+MTT HPDYA LAAR+ +SNLHKNT KSFS T+K +Y + + ++G A LI+ +
Sbjct: 61 AETAASMTTKHPDYAILAARVAISNLHKNTLKSFSGTMKLLYQYVDPKTGENAALISKET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+ II NAA LDS IIYDRDF YD+FG+KTLE+SYL+K+ GK+VERPQHMLMRVAVGIH
Sbjct: 121 WKIIQANAALLDSSIIYDRDFGYDFFGYKTLEKSYLMKLNGKIVERPQHMLMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
++I+ AI+TY+++S+RWFTHA+PTLFNAGTP+ QLSSCFL+ MKDDSIEGIYDTLK+ A
Sbjct: 181 ENIEKAIETYNLLSERWFTHATPTLFNAGTPKPQLSSCFLLTMKDDSIEGIYDTLKQTAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYI+GTNGTSNGI+PMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 241 ISQSAGGIGLSIHNVRATGSYIKGTNGTSNGIIPMLRVFNDTARYVDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIFEFL+L+KNHGKEE RARDLFYALW PDLFM+RV++N WSLFCP+E PGLA
Sbjct: 301 LEPWHADIFEFLNLKKNHGKEEERARDLFYALWTPDLFMKRVEANADWSLFCPHECPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G +FERLYTKYE EGKA+K + AQ LWF+IL+SQ+ETGTPYML+KD NKKSNQ+NL
Sbjct: 361 DTYGEDFERLYTKYEAEGKARKTIPAQELWFQILESQVETGTPYMLYKDAANKKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I+YT+P E AVCNLASIALP++V G PS F
Sbjct: 421 GTIKSSNLCTEIIEYTAPDEVAVCNLASIALPKFVNTEG----PAPS------------F 464
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EVT +VT NLN+IID+NYYPV A SN RHRPIG+G+QGLAD FIL+ PFDS
Sbjct: 465 DFQKLYEVTKVVTRNLNRIIDINYYPVPEAENSNKRHRPIGLGIQGLADAFILMRFPFDS 524
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP-SDRWD 599
EAQ+LN+D+FET+Y+ A+ TS E+A EGPY ++ GSP+SKGI Q DMW V P S WD
Sbjct: 525 EEAQKLNRDVFETLYFAAMETSMELAKEEGPYSSFEGSPISKGIFQFDMWDVTPDSGLWD 584
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR + ++GVRNSLL+APMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH
Sbjct: 585 WEDLRKKVMEHGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 644
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL DL ++GLW+ +KNK+I +GSVQ+IP+IPE+LKA+YKT WEIKQK+++DM+ DRG
Sbjct: 645 LLRDLVKIGLWNDTMKNKLIAANGSVQQIPEIPEDLKALYKTAWEIKQKSIIDMSADRGA 704
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN 779
YI SQSLNI M PNF KLTS+HF+AW GLKTGMYYLR++AAADA+KFTVD + E
Sbjct: 705 YICQSQSLNIFMTDPNFAKLTSMHFYAWKAGLKTGMYYLRTKAAADAVKFTVDRQAIAET 764
Query: 780 PKVTD---------------------------DDDAKMAQMVCSLTNREECMACGS 808
VT+ +++ K A M CSL N E C CGS
Sbjct: 765 SPVTETIQEKPLDYKGYAKEQAEKAAASFQMTEEEQKYAAMQCSLDNPEGCEMCGS 820
>gi|440751432|ref|ZP_20930665.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Mariniradius saccharolyticus AK6]
gi|436480074|gb|ELP36339.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Mariniradius saccharolyticus AK6]
Length = 801
Score = 1176 bits (3043), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 551/816 (67%), Positives = 662/816 (81%), Gaps = 23/816 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V+KRDG++E+V FDKIT R++ L YGL + P+ V++KV G+Y GVTTS+LD LA
Sbjct: 1 MLVIKRDGRRESVRFDKITTRIENLCYGLDSRYIHPIEVAKKVIDGLYDGVTTSELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE A++T HPDYA LAARI +SNLHK T +SFS T+K MY + N ++G A LIA DV
Sbjct: 61 AEVCASLTVKHPDYAVLAARIAISNLHKTTSQSFSNTMKRMYTYINPKTGENAALIAPDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y ++ +AA+LD I Y RDFDYDYFGFKTLE+SYL+K+ GKVVERPQHMLMRVAVGIHK
Sbjct: 121 YGVVKNHAAKLDEAIDYTRDFDYDYFGFKTLEKSYLIKLDGKVVERPQHMLMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DIDSAI+TYH++SQ+WFTHA+PTLFNAGTP+AQLSSCFL+ MKDDSI+GIYDTLK+CA
Sbjct: 181 EDIDSAIETYHLLSQKWFTHATPTLFNAGTPKAQLSSCFLLTMKDDSIDGIYDTLKQCAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HNIRA GSYIRGTNG SNGIVPMLR F+ TARYVDQGGGKRKG+FA+Y
Sbjct: 241 ISQSAGGIGLSIHNIRAKGSYIRGTNGVSNGIVPMLRNFDMTARYVDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+ +FL+L++NHGKEE RARDLFYA+W+PDLFM+RV+ N WSLFCPNEAPGLA
Sbjct: 301 LEPWHADVKDFLELKRNHGKEEMRARDLFYAMWIPDLFMKRVEQNDEWSLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC G EFERLY KYEKEG+A++VV+AQ LWFEIL+SQIETGTPYML+KD+ NKKSNQQNL
Sbjct: 361 DCHGEEFERLYEKYEKEGRAREVVKAQELWFEILESQIETGTPYMLYKDSANKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I+YT+P E AVCNLASIALP++V E G G +F
Sbjct: 421 GTIKSSNLCTEIIEYTAPDEVAVCNLASIALPKFVTE-------------GPDGK--LFF 465
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D KL E+T + T NLNK+ID+NYYPVE ARRSN RHRPIG+GVQGLAD FI+L MPFDS
Sbjct: 466 DHNKLYEITKVATRNLNKVIDINYYPVEEARRSNFRHRPIGLGVQGLADAFIMLRMPFDS 525
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP-SDRWD 599
EA+ LN+DIFETIYY A+ TS E+A +G YET+ GSP SKGILQ DMWGV P S RW+
Sbjct: 526 AEAKGLNEDIFETIYYAAVETSMELAKTQGSYETFEGSPASKGILQFDMWGVTPKSGRWN 585
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L+ + ++G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RR LSGEF+VVNKH
Sbjct: 586 WDELKVNVIQHGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRTLSGEFIVVNKH 645
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
L+ DL ++GLW+ +KN++I +GSVQ IP IP+ +K IYKTVWE+ Q+ ++DMA DRG
Sbjct: 646 LMKDLIKLGLWNDTMKNRLIAANGSVQNIPGIPQNIKDIYKTVWELSQRVIIDMAADRGA 705
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK-- 777
YI SQS+N+ M PNFGKLTS+HF+AW +GLKTGMYYLRS+AAA AI+FTVD S L+
Sbjct: 706 YICQSQSMNVFMQDPNFGKLTSMHFYAWKKGLKTGMYYLRSQAAAAAIQFTVDKSALEPD 765
Query: 778 -----ENPKVTDDDDAKMAQMVCSLTNREECMACGS 808
+ P + K + CSL N E+C CGS
Sbjct: 766 KTIVAQTPTMDLTKSQKQGAIACSLDNPEDCEMCGS 801
>gi|256421018|ref|YP_003121671.1| ribonucleoside-diphosphate reductase subunit alpha [Chitinophaga
pinensis DSM 2588]
gi|256035926|gb|ACU59470.1| ribonucleoside-diphosphate reductase, alpha subunit [Chitinophaga
pinensis DSM 2588]
Length = 802
Score = 1174 bits (3036), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/772 (70%), Positives = 652/772 (84%), Gaps = 20/772 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG +EAV FDKITAR++KL YGL+ E+ D + V++KV G+Y GVTTS+LD LA
Sbjct: 1 MFVIKRDGHKEAVKFDKITARVEKLCYGLNAEYVDAIDVAKKVIQGLYDGVTTSELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA++TT HPDYA LA+RI VSNLHKNT KSFS+T++++YN+ + + G APL+ADDV
Sbjct: 61 AETAASLTTKHPDYALLASRIAVSNLHKNTVKSFSKTMENLYNYIDPKVGKPAPLLADDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+I+MK+AA LDS IIYDRDF +DYFGFKTLERSYLLK+ GKV ERPQHM MRV+VGIHK
Sbjct: 121 YEIVMKHAAILDSSIIYDRDFAFDYFGFKTLERSYLLKLDGKVAERPQHMFMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+ IKTY++MS+RWFTHA+PTLFNAGTP+ Q+SSCFL+ M+DDSIEGIYDTLK+ A
Sbjct: 181 EDIDAVIKTYNLMSERWFTHATPTLFNAGTPKPQMSSCFLLTMQDDSIEGIYDTLKQTAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HNIRATGSYI GTNGTSNGI+PMLRVFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISQSAGGIGLSIHNIRATGSYISGTNGTSNGIIPMLRVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIFEFLDLRKNHGKEE RARDLFYALWVPDLFM RV+ NG WSLFCP+EAPGL
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEEMRARDLFYALWVPDLFMRRVEENGDWSLFCPHEAPGLH 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+CWG EFE+LYTKYEKE +A+K V+AQ+LWF +L +QIETGTPY+L+KD+ N+KSNQQNL
Sbjct: 361 ECWGEEFEKLYTKYEKENRARKTVKAQDLWFAVLDAQIETGTPYLLYKDSANRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I+YT E AVCNLAS+ALPR+V + F
Sbjct: 421 GTIKSSNLCTEIIEYTDANEVAVCNLASLALPRFVID--------------------GQF 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D EKL EVT NLN+IID N+YPV+ AR SNLRHRPIG+GVQGLAD FIL+ PF+S
Sbjct: 461 DHEKLYEVTYQAALNLNRIIDNNFYPVDEARNSNLRHRPIGLGVQGLADAFILMRYPFES 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LN +IFETIY+ AL S ++A ++G YETY GSPVSKGILQ DMWGV PS RWDW
Sbjct: 521 EEAKKLNSEIFETIYFAALNASKDLAIKDGAYETYAGSPVSKGILQFDMWGVTPSPRWDW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I K+GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY+RRVLSGEFVVVNKHL
Sbjct: 581 TSLKGEIKKHGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFVVVNKHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL E+GLW +KNKII +GS+Q IP+IP ++K +YKTVWEIKQ+T++DMA DRG +
Sbjct: 641 LKDLVELGLWDNDMKNKIITSNGSIQHIPEIPSQIKELYKTVWEIKQRTIIDMAADRGAF 700
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
I SQSLN+ +D P+ KLTS+HF+AW +GLKTGMYYLR++AAA A++FTV+
Sbjct: 701 ICQSQSLNLFVDTPSAAKLTSMHFYAWKKGLKTGMYYLRTQAAAQAVQFTVE 752
>gi|441498219|ref|ZP_20980419.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Fulvivirga imtechensis AK7]
gi|441438007|gb|ELR71351.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Fulvivirga imtechensis AK7]
Length = 781
Score = 1169 bits (3023), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/801 (67%), Positives = 662/801 (82%), Gaps = 25/801 (3%)
Query: 13 VHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHP 72
+ FDK+TAR++KL YGL + + +PV +++KV G+Y GVTT +LD LAAETAA++TT HP
Sbjct: 1 MKFDKVTARIEKLCYGLDMNYIEPVDIAKKVINGIYDGVTTVELDNLAAETAASLTTKHP 60
Query: 73 DYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLD 132
D+A LAARI +SNLHK T KSFS T+K +Y + + ++G APLI+ + Y +I K+AA LD
Sbjct: 61 DFALLAARIAISNLHKVTSKSFSNTMKRLYTYVDPKTGENAPLISKEAYGVIKKHAALLD 120
Query: 133 SEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHM 192
S IIYDRDF YDYFGFKTLERSYL++V+GK+VERPQHMLMRVA+GIH DDID+AI+TY++
Sbjct: 121 SSIIYDRDFSYDYFGFKTLERSYLMRVEGKIVERPQHMLMRVAIGIHMDDIDAAIETYNL 180
Query: 193 MSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSV 252
+S++WFTHA+PTLFNA TP+ QLSSCFL+ M+DDSI+GIYDTLK+CA IS+SAGGIG+S+
Sbjct: 181 LSEKWFTHATPTLFNAATPKPQLSSCFLLTMQDDSIDGIYDTLKQCAKISQSAGGIGLSI 240
Query: 253 HNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFL 312
HN+RATGSYI+GT G SNGIVPMLR F+ TARYVDQGGGKRKG+FA+YLEPWHADIF+FL
Sbjct: 241 HNVRATGSYIKGTGGVSNGIVPMLRNFDMTARYVDQGGGKRKGSFAIYLEPWHADIFDFL 300
Query: 313 DLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYT 372
DL+KNHGKEE RARDLFYALW+PDLFM+RV+ N +WSLFCPNEAPGLADC+G EFE+LYT
Sbjct: 301 DLKKNHGKEELRARDLFYALWIPDLFMKRVEDNDVWSLFCPNEAPGLADCYGDEFEKLYT 360
Query: 373 KYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEV 432
KYE+EGK +K V+AQ+LWFE+L++QIETGTPYML+KD NKKSNQ+NLGTIKSSNLCTE+
Sbjct: 361 KYEREGKYRKQVKAQDLWFEVLEAQIETGTPYMLYKDAANKKSNQKNLGTIKSSNLCTEI 420
Query: 433 IQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIV 492
++YT+P E AVCNLASIALP++V E G FD +KL E+T +V
Sbjct: 421 VEYTAPDEVAVCNLASIALPKFVTEDG-------------------RFDHQKLYEITKVV 461
Query: 493 TENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFE 552
T+NLNK+ID+NYYPV+ AR SN+RHRPIGIGVQGLADTF++L MPFDS EA+ LNK I E
Sbjct: 462 TKNLNKVIDINYYPVKEARNSNMRHRPIGIGVQGLADTFLMLKMPFDSPEARGLNKHIHE 521
Query: 553 TIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP-SDRWDWGGLRDMISKNG 611
TIY+ A+ S EIA EGPYETY GSPVSKGI Q DMWGV P S RWDW L+ + KNG
Sbjct: 522 TIYFAAMTASMEIATVEGPYETYKGSPVSKGIFQFDMWGVTPDSGRWDWESLKKEVRKNG 581
Query: 612 VRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWS 671
VRNSLL+APMPTASTSQILGNNECFEPYTSNIY+RR LSGEF+VVNKHL+ DL +GLW
Sbjct: 582 VRNSLLLAPMPTASTSQILGNNECFEPYTSNIYTRRTLSGEFIVVNKHLMKDLIALGLWD 641
Query: 672 PIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHM 731
+KN++I +GSVQ IP+IP+ +K +YKTVWEI QK ++DMA DRG YI SQS+N+H+
Sbjct: 642 DSMKNRLIEANGSVQNIPEIPQHIKDLYKTVWEISQKAIIDMAADRGAYICQSQSMNVHI 701
Query: 732 DQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTS----VLKENPKVTDDDD 787
PNFGKLTS+HF+AW +GLKTGMYYLRS+AAA AI+FTVD S + VT+++
Sbjct: 702 QDPNFGKLTSMHFYAWKKGLKTGMYYLRSKAAASAIQFTVDKSAKQQPAAQQQAVTNEEQ 761
Query: 788 AKMAQMVCSLTNREECMACGS 808
+ A MVCSL N + C ACGS
Sbjct: 762 NR-ADMVCSLDNPDACEACGS 781
>gi|408672794|ref|YP_006872542.1| ribonucleoside-diphosphate reductase, alpha subunit [Emticicia
oligotrophica DSM 17448]
gi|387854418|gb|AFK02515.1| ribonucleoside-diphosphate reductase, alpha subunit [Emticicia
oligotrophica DSM 17448]
Length = 823
Score = 1168 bits (3022), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 552/837 (65%), Positives = 669/837 (79%), Gaps = 43/837 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG++E+V FDKITAR+++L YGL PV V+ KV G+Y GV+TS+LD LA
Sbjct: 1 MFVIKRDGRRESVKFDKITARIERLCYGLEPAFVQPVEVAMKVVAGIYDGVSTSELDSLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA+MTT HPDYA LAARI +SNLHKNT KSFS T+K +Y + + ++G A LIA D
Sbjct: 61 AETAASMTTKHPDYAILAARIAISNLHKNTLKSFSGTMKMLYQYIDPKTGQNASLIAKDT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+ +I K+AA LDS IIYDRDF YDYFG+KTLE+SYLLKV GK+VERPQHMLMRVAVGIH
Sbjct: 121 WKVIQKHAALLDSAIIYDRDFGYDYFGYKTLEKSYLLKVNGKIVERPQHMLMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID ++TY ++S+RWFTHA+PTLFNAGTP+ QLSSCFL+ +K+DSI GIYDTL + A
Sbjct: 181 EDIDRVLETYELLSERWFTHATPTLFNAGTPKPQLSSCFLLTIKEDSITGIYDTLGQTAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+++HN+RATGSYI+GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 241 ISQSAGGIGLAIHNVRATGSYIKGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWHADIFEFLDLRKNHGKEE RARDLFYALW+ DLFM+RV++N WSLFCPNEAPGL+
Sbjct: 301 IEPWHADIFEFLDLRKNHGKEELRARDLFYALWISDLFMKRVEANDTWSLFCPNEAPGLS 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EFE+LY KYE EGKA+K ++AQ+LWF I++SQIETGTPYML+KD NKKSNQ+NL
Sbjct: 361 DCYGEEFEKLYEKYELEGKARKTIKAQDLWFAIMESQIETGTPYMLYKDAANKKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I+YT+P E AVCNLASIALP+Y+ V + F
Sbjct: 421 GTIKSSNLCTEIIEYTAPDEVAVCNLASIALPKYI--------------VKDEKTGFMKF 466
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D EKL EVT ++T+NLNK+IDVNYYPV A RSNLRHRPIG+GVQGLADTFI L MPF+S
Sbjct: 467 DHEKLYEVTKVITKNLNKVIDVNYYPVIEAERSNLRHRPIGLGVQGLADTFITLRMPFES 526
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP-SDRWD 599
EA++LNK+IFETIY+ A+ +S E+A +GPY T+ GSP+S+GI Q DMWGV+P S RW+
Sbjct: 527 DEARRLNKEIFETIYFAAMESSMEMAMADGPYSTWEGSPISQGIFQFDMWGVSPDSGRWN 586
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR+ + +GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEFVVVNKH
Sbjct: 587 WEELREKVKTHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFVVVNKH 646
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL DL ++GLW+ +KNK+I +GSVQ I +IP+ LK +Y+T WEIKQKT++DMA DRG
Sbjct: 647 LLKDLVKIGLWNDTMKNKLIAANGSVQGIAEIPQNLKDLYRTAWEIKQKTIIDMAADRGA 706
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD------- 772
+I SQSLNI M+ NFGKLTS+HF+AW GLKTGMYYLR++AA+DA+KFTVD
Sbjct: 707 FICQSQSLNIFMENANFGKLTSMHFYAWKAGLKTGMYYLRTKAASDAVKFTVDRQAIAEV 766
Query: 773 ---TSVLKENP------------------KVTDDDDAKMAQMVCSLTNREECMACGS 808
TS + E P + + + + A M CSL + E C CGS
Sbjct: 767 VPATSAVSEKPLDYVKYAEEQTAKATAAATFSSEAEYQYAAMQCSLDDPEGCEMCGS 823
>gi|340375670|ref|XP_003386357.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Amphimedon queenslandica]
Length = 794
Score = 1167 bits (3020), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 541/810 (66%), Positives = 654/810 (80%), Gaps = 22/810 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG++E V FDKIT+R+ KL Y L+ + +PV ++ KV GVY GVTTS+LD LA
Sbjct: 5 MYVIKRDGREEGVMFDKITSRITKLCYNLNNDFVEPVTITMKVINGVYAGVTTSELDTLA 64
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA+MTT HPDYA LAARI VSNLHK TKK FS ++D+Y++ N ++G P+I+ +
Sbjct: 65 AETAASMTTKHPDYAILAARIAVSNLHKETKKCFSAVMQDLYDYVNPKNGRHCPMISAET 124
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
II NA +L+S I+Y+RD+DY YFGFKTLERSYLLK+ GKV ERPQHMLMRV+VGIH
Sbjct: 125 NKIIQDNADKLNSAILYNRDYDYSYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHG 184
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+++D AI+TY++MS+RWFTHASPTLFN+GT R QLSSCFL+ M DDSIEGIYDTLK CA
Sbjct: 185 NNLDKAIETYNLMSERWFTHASPTLFNSGTCRPQLSSCFLLTMADDSIEGIYDTLKRCAN 244
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++VH IR++GSYI GTNGTSNG+VPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 245 ISKSAGGIGLAVHKIRSSGSYIAGTNGTSNGLVPMLRVFNNTARYVDQGGNKRPGAFAIY 304
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWHADI FLDLRKNHGKEE RARDLFYALW PDLFM RV+S+G+WSL CP+E PGL
Sbjct: 305 IEPWHADIIGFLDLRKNHGKEEQRARDLFYALWTPDLFMRRVESDGMWSLMCPDECPGLY 364
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EF++LY KYE EG+A+ V++AQ LWF IL+SQIETGTPYML+KD CN+KSNQ+NL
Sbjct: 365 ETWGDEFDQLYEKYEAEGRARTVIRAQKLWFAILESQIETGTPYMLYKDACNRKSNQKNL 424
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+ SNLCTE+++YTSP E AVCNLASIALPR+V E F
Sbjct: 425 GTIQCSNLCTEIVEYTSPDEVAVCNLASIALPRFVSE--------------------GQF 464
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF++L EVT ++T NLN+IID+NYYPV AR SNLRHRPIGIGVQGLADTFIL+ FD
Sbjct: 465 DFQRLFEVTKVITRNLNRIIDINYYPVPEARTSNLRHRPIGIGVQGLADTFILMRYSFDC 524
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ+LN+ IFETIYY AL S E+A EG YETYHGSPVS+GILQ DMW V PSD WDW
Sbjct: 525 EEAQELNRMIFETIYYAALTASCELAGEEGVYETYHGSPVSQGILQYDMWDVTPSDLWDW 584
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K G+RNSLLVAPMPTAST+QILGNNE EPYTSNIYSRRVLSGEF +VN HL
Sbjct: 585 KALKEQIAKYGIRNSLLVAPMPTASTAQILGNNESIEPYTSNIYSRRVLSGEFQIVNSHL 644
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
+ DL+E GLW+ +K ++I D+GSVQ IP+IP+ELK +YKTVWEI QKTL++MA DRG Y
Sbjct: 645 MRDLSERGLWNDDMKQRLIKDNGSVQNIPEIPDELKVLYKTVWEISQKTLINMAADRGAY 704
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQS NIHM + NFGK+TS+HF+ W +GLKTGMYYLR+RAAA AI+FTVD +V+K
Sbjct: 705 IDQSQSFNIHMGETNFGKMTSMHFYGWKKGLKTGMYYLRTRAAAQAIQFTVDQTVIKSAS 764
Query: 781 KVTDD--DDAKMAQMVCSLTNREECMACGS 808
+D+ + + M+CSL N+E C++C +
Sbjct: 765 TKSDEMKKEEQEEAMICSLKNKEACISCSA 794
>gi|406663813|ref|ZP_11071832.1| Ribonucleoside-diphosphate reductase 1 subunit alpha [Cecembia
lonarensis LW9]
gi|405551927|gb|EKB47524.1| Ribonucleoside-diphosphate reductase 1 subunit alpha [Cecembia
lonarensis LW9]
Length = 797
Score = 1166 bits (3017), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/812 (67%), Positives = 658/812 (81%), Gaps = 19/812 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V+KRDG++E+V FDKIT R++ L GL + P+ V++KV G+Y GVTT++LD LA
Sbjct: 1 MLVIKRDGRRESVRFDKITTRIENLCNGLDGRYIHPIEVAKKVIDGLYDGVTTTELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE A++T HPDYA LAARI +SNLHK T +SFS T+K +Y H N+++G A LIA DV
Sbjct: 61 AEVCASLTVKHPDYAILAARIAISNLHKTTSQSFSNTMKRLYTHINQKTGDNAALIAPDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y ++ K+AA+LD I Y RDFDYDYFGFKTLERSYL+K+ GKVVERPQHMLMRVAVGIHK
Sbjct: 121 YGVVKKHAAKLDEVIDYQRDFDYDYFGFKTLERSYLIKLDGKVVERPQHMLMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+AI+TYH++SQ+WFTHA+PTLFNAGTP+ QLSSCFL+ MK+DSI+GIYDTLK+CA
Sbjct: 181 EDIDAAIETYHLLSQKWFTHATPTLFNAGTPKPQLSSCFLLTMKEDSIDGIYDTLKQCAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+H++RA GSYIRGTNG SNGIVPMLR F+ TARYVDQGGGKRKG+FA+Y
Sbjct: 241 ISQSAGGIGLSIHHVRAKGSYIRGTNGVSNGIVPMLRNFDMTARYVDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+ +FL+L++NHGKEE RARDLFYA+W+PDLFM+RV+ N WSLFCPNEAPGLA
Sbjct: 301 LEPWHADVKDFLELKRNHGKEEMRARDLFYAMWIPDLFMKRVEQNDEWSLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC G EFE+LY KYE+EGKA++ ++AQ LWFEIL+SQIETGTPYML+KD+ NKKSNQQNL
Sbjct: 361 DCHGEEFEKLYEKYEREGKARETIKAQELWFEILESQIETGTPYMLYKDSANKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I+YTSP E AVCNLASIALP++V G G K YF
Sbjct: 421 GTIKSSNLCTEIIEYTSPDEVAVCNLASIALPKFV-------------ATGKDGKK--YF 465
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D +KL EVT + T NLNK+IDVNYYPVE ARRSN RHRPIG+GVQGLAD FI+L MPFDS
Sbjct: 466 DHQKLYEVTKVATRNLNKVIDVNYYPVEEARRSNFRHRPIGLGVQGLADAFIMLRMPFDS 525
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP-SDRWD 599
EA+ LN+DIFETIYY ++ TS E+A +G YETY GSP SKGI Q DMWGV P S RW
Sbjct: 526 DEAKGLNEDIFETIYYASMETSMELAKVQGTYETYEGSPASKGIFQFDMWGVTPKSGRWA 585
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L++ + K G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RR LSGEF+VVNKH
Sbjct: 586 WNELKEKVKKFGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRTLSGEFIVVNKH 645
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
L+ DL +GLW+ KN++I +GSVQ IP IP+ +K IYKTVWEI Q+ ++DMA +RG
Sbjct: 646 LMRDLINLGLWNDTTKNRLIAANGSVQNIPGIPQNIKDIYKTVWEISQRIIIDMATERGA 705
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN 779
YI SQS+N+ M PNFGKLTS+HF+AW +GLKTGMYYLRS+AAA AI+FTVD S L+ +
Sbjct: 706 YICQSQSMNVFMQDPNFGKLTSMHFYAWKKGLKTGMYYLRSQAAASAIQFTVDKSALETD 765
Query: 780 PKVTDDD---DAKMAQMVCSLTNREECMACGS 808
+ D + K + CSL + E C CGS
Sbjct: 766 KTASAVDPSRNQKQDAIACSLDDPEGCEMCGS 797
>gi|392968362|ref|ZP_10333778.1| ribonucleoside-diphosphate reductase, alpha subunit [Fibrisoma limi
BUZ 3]
gi|387842724|emb|CCH55832.1| ribonucleoside-diphosphate reductase, alpha subunit [Fibrisoma limi
BUZ 3]
Length = 827
Score = 1166 bits (3016), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 549/842 (65%), Positives = 675/842 (80%), Gaps = 49/842 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDG++E+V FDKITAR++KL YGL + PV V+ KV G+Y GV T++LD LA
Sbjct: 1 MYVVKRDGRRESVKFDKITARIEKLCYGLDSTYVQPVEVAMKVVNGLYDGVKTTELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA+MTT HPDYA LAARI +SNLHK T KSFS TIK +Y + + ++G A LI+ +V
Sbjct: 61 AETAASMTTKHPDYAILAARIAISNLHKETNKSFSSTIKRLYTYEDPKTGENASLISKEV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+++ K+AA LDS IIYDRD+ YDYFG+KTLE+SYLLK+ GK+ ERPQHMLMRVAVGIH
Sbjct: 121 YEVVRKHAALLDSTIIYDRDYGYDYFGYKTLEKSYLLKIDGKIAERPQHMLMRVAVGIHM 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+D+++AI+TY+++S++WFTHA+PTLFNAGTP+ Q+SSCFL+ MKDDSIEGIYDTLK+ A
Sbjct: 181 EDVEAAIETYNLLSEKWFTHATPTLFNAGTPKPQMSSCFLLTMKDDSIEGIYDTLKQTAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATG+YI+GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG+FAVY
Sbjct: 241 ISQSAGGIGLSIHNVRATGTYIKGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAVY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIFEFLDL+KNHGKEE RARDLFYALW PDLFM+RV++N +WSLFCP+E PGLA
Sbjct: 301 LEPWHADIFEFLDLKKNHGKEELRARDLFYALWTPDLFMKRVEANDVWSLFCPHECPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EFE LYT+YE+EG+A++ V+AQ+LW+EIL+SQ ETGTPYML+KD N+KSNQ+NL
Sbjct: 361 DCYGDEFEELYTRYEREGRARRTVKAQDLWYEILESQTETGTPYMLYKDAANRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I+YTSP E AVCNLASIALP++++ P ++ F
Sbjct: 421 GTIKSSNLCTEIIEYTSPDEVAVCNLASIALPKFIKR-------DPDGVL--------RF 465
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D +KL E+T + T+NLNKIID+NYYPVE ARRSN+RHRPIG+GVQGLAD FI+L MPF+S
Sbjct: 466 DHQKLFEITKVATKNLNKIIDLNYYPVEEARRSNMRHRPIGLGVQGLADAFIMLRMPFES 525
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP-SDRWD 599
EA++LN+DIFETIY+ A+ S E A GPYET+ GSP+S+GI Q DMWGV P S+RW+
Sbjct: 526 EEARRLNEDIFETIYFGAMTASMEEAKTYGPYETWKGSPISQGIFQFDMWGVTPKSNRWN 585
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR + ++GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY+RRVLSGEFVVVNKH
Sbjct: 586 WEALRKDVVEHGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFVVVNKH 645
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL DL ++GLW+ +KN +I +GSVQ IP IP+ +K +YKTVWEIKQK ++DMA DRG
Sbjct: 646 LLKDLVKLGLWNDAMKNNLILANGSVQAIPGIPQHIKDLYKTVWEIKQKHIIDMAADRGA 705
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTV-------- 771
YI SQSLNIH+ NFGKLTS+HF+AW GLKTGMYYLR++AAADA+KFTV
Sbjct: 706 YICQSQSLNIHIQDANFGKLTSMHFYAWKAGLKTGMYYLRTKAAADAVKFTVVQPQAEPQ 765
Query: 772 ----------------------DTSVLKENPK---VTDDDDAKMAQMVCSLTNREECMAC 806
+ +V++ P+ + D + A M CSL + E C C
Sbjct: 766 LEPALAETAPVEKPLDYVQYAKEHAVMQPKPEPLPMVSDVEQNYAAMTCSLDDPEGCEMC 825
Query: 807 GS 808
GS
Sbjct: 826 GS 827
>gi|343084826|ref|YP_004774121.1| ribonucleoside-diphosphate reductase subunit alpha [Cyclobacterium
marinum DSM 745]
gi|342353360|gb|AEL25890.1| ribonucleoside-diphosphate reductase, alpha subunit [Cyclobacterium
marinum DSM 745]
Length = 798
Score = 1161 bits (3004), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/813 (66%), Positives = 667/813 (82%), Gaps = 20/813 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V+KRDG++E+V FDKIT R++ L Y L + P+ V++KV G+Y GVTT++LD LA
Sbjct: 1 MLVIKRDGRRESVRFDKITTRIENLCYELDARYIHPIEVAKKVIDGLYDGVTTTELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE A++T HPDYA LAARI +SNLHK T +SFS T+K +Y + N ++ A LIA DV
Sbjct: 61 AEVCASLTVKHPDYAILAARIAISNLHKTTSQSFSNTMKRLYTYINPKTDENAALIAPDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y I+ K+AA+LD I Y RDFDYD+FGFKTLERSYL+K+ GKVVERPQHMLMRV++GIHK
Sbjct: 121 YGIVKKHAAKLDQVIDYSRDFDYDFFGFKTLERSYLIKLDGKVVERPQHMLMRVSIGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+AI+TYH++SQ+WFTHA+PTLFNAGTP+ QLSSCFL+ MKDDSI+GIYDTLK+CA
Sbjct: 181 EDIDAAIETYHLLSQKWFTHATPTLFNAGTPKPQLSSCFLLTMKDDSIDGIYDTLKQCAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RA GSYIRGTNG SNGIVPMLR F+ TARYVDQGGGKRKG+FA+Y
Sbjct: 241 ISQSAGGIGLSIHNVRAKGSYIRGTNGVSNGIVPMLRNFDMTARYVDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADI +FLDL+KNHGK+E RARDLFYA+WV DLFM+RV++N WSLFCP+EAPGLA
Sbjct: 301 LEPWHADIKDFLDLKKNHGKDELRARDLFYAVWVSDLFMKRVEANEEWSLFCPHEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC G EFERLY KYEKEG+A++ ++AQ LWFEIL+SQIETGTPY+L+KD N KSNQ+NL
Sbjct: 361 DCHGEEFERLYEKYEKEGRARETIKAQELWFEILESQIETGTPYILYKDAANGKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+++YTSP E AVCNLAS+ALP++V G G K +F
Sbjct: 421 GTIKSSNLCTEIMEYTSPDEVAVCNLASLALPKFVS-------------TGKDGKK--HF 465
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D +KL EVT +VT+NLNK+IDVNYYPV AR+SN RHRP+G+G+QGLADTFILL MPFDS
Sbjct: 466 DHQKLYEVTKVVTKNLNKVIDVNYYPVPEARKSNFRHRPVGLGIQGLADTFILLRMPFDS 525
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP-SDRWD 599
EA+ LN+DIFETIY+ ++ TS E+A G YETY GSPVSKG+ Q DMWGV P S RW+
Sbjct: 526 EEAKGLNEDIFETIYFASMETSMELAKINGTYETYEGSPVSKGLFQFDMWGVTPKSGRWN 585
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W GL++ ++K GVRNSLLVAPMPTASTSQILGNNECFEPYT+NIY+RR LSGEFVVVNKH
Sbjct: 586 WTGLKEKVNKYGVRNSLLVAPMPTASTSQILGNNECFEPYTTNIYTRRTLSGEFVVVNKH 645
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
L+ DL +GLW+ +KN++I +GSVQ +P IP+ LK +YKTVWEI QK ++DMA DRG
Sbjct: 646 LMKDLIRLGLWTDGMKNRLIASNGSVQDMPDIPQNLKDLYKTVWEISQKVIIDMAADRGA 705
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN 779
Y+ SQS+N+ + +PNFGKLTS+HF+AW +GLKTG+YYLRS+AA+ AIKFTVD S L ++
Sbjct: 706 YVCQSQSMNLFLQEPNFGKLTSMHFYAWKKGLKTGIYYLRSKAASSAIKFTVDKSQLNDD 765
Query: 780 PKVT-DDDDAKMAQ---MVCSLTNREECMACGS 808
+ DD +A+ Q +VCSL N +EC ACGS
Sbjct: 766 KQTAIDDAEARKQQQDAIVCSLDNPDECEACGS 798
>gi|328770641|gb|EGF80682.1| hypothetical protein BATDEDRAFT_16482 [Batrachochytrium
dendrobatidis JAM81]
Length = 796
Score = 1160 bits (3001), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/811 (66%), Positives = 656/811 (80%), Gaps = 22/811 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG++E V FDKIT+R+ KL YGL + + DP V+QKV TGVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRRERVAFDKITSRINKLCYGLDMNYVDPAEVAQKVVTGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AET A +TT HPDYA LAARI +SNLHK TKK FS ++D+Y + N ++ +P+I+
Sbjct: 61 AETTAYLTTKHPDYAILAARIAISNLHKETKKQFSSVMQDLYEYVNPKNNKHSPMISKTT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+D I+KNA RL+S IIYDRDF+Y++FGFKTLERSYLL++ K ERPQHMLMRVAVGIH
Sbjct: 121 FDCILKNADRLNSAIIYDRDFNYNFFGFKTLERSYLLRINRKTAERPQHMLMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD+++ I+TY++MS+++FTHASPTLFNAGTP Q+SSCFL+ ++DDSIEGIY TLK CA+
Sbjct: 181 DDVEAVIETYNLMSEKYFTHASPTLFNAGTPNPQMSSCFLLTIEDDSIEGIYSTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IR++GSYI GTNG SNGI+PMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHKIRSSGSYIAGTNGLSNGIIPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+FEFLDLRKN GKEE+RARDLFYALW+PD+FM RV+SNG WSLFCP EAPGL
Sbjct: 301 LEPWHADVFEFLDLRKNTGKEENRARDLFYALWIPDMFMRRVESNGDWSLFCPAEAPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG EF+ LY KYE+EG+A+K+++AQ LW+ IL SQ ETGTPYML+KD CN+KSNQQNL
Sbjct: 361 DVWGDEFDALYEKYEREGRARKIIKAQKLWYAILDSQSETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVRE--MGVPMESHPSKLVGSRGSKNR 478
GTIK SNLCTE+++Y+SP E AVCNLAS+ALP +V + G P+
Sbjct: 421 GTIKCSNLCTEIVEYSSPDEVAVCNLASLALPNFVIKDTTGAPV---------------- 464
Query: 479 YFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPF 538
FDF+K+ + T I T NLNKII++NYYPVE A+RSN+RHRPIG+GVQGLADTFI + MPF
Sbjct: 465 -FDFDKMIDTTKIATYNLNKIINLNYYPVEQAKRSNMRHRPIGLGVQGLADTFIKMRMPF 523
Query: 539 DSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRW 598
DS EA++LN IFE IY+ AL S E+A R+GPYETY GSP+SKGI+QPDMW V SD++
Sbjct: 524 DSPEAKKLNIQIFEAIYFAALTASCELAKRDGPYETYSGSPMSKGIIQPDMWNVKVSDQF 583
Query: 599 DWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNK 658
DW LR I+K GVRNSLLVAPMPTASTSQILGNNE FEPYTSNIY RRVLSGEF +VN+
Sbjct: 584 DWPTLRANIAKYGVRNSLLVAPMPTASTSQILGNNEAFEPYTSNIYIRRVLSGEFQIVNQ 643
Query: 659 HLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRG 718
HLL DLTE+GLW+ +KN+II +GS+Q IP IP +LKAIYKTVWEI QK ++DMA DRG
Sbjct: 644 HLLKDLTELGLWNESMKNRIISANGSIQNIPSIPAQLKAIYKTVWEISQKVIIDMAADRG 703
Query: 719 CYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE 778
+ID SQSLNIH+ + N+GKLTS+HF+ W +GLKTGMYYLRSR AADAIKFTVD L +
Sbjct: 704 AFIDQSQSLNIHLAEVNYGKLTSMHFYGWHKGLKTGMYYLRSRPAADAIKFTVDKQSLTQ 763
Query: 779 NPKVTDDDDA---KMAQMVCSLTNREECMAC 806
+ ++ A M M+CSL NR+ CM+C
Sbjct: 764 GAEDKNNVVASVNNMTDMLCSLENRDACMSC 794
>gi|410027778|ref|ZP_11277614.1| ribonucleoside-diphosphate reductase subunit alpha [Marinilabilia
sp. AK2]
Length = 799
Score = 1157 bits (2994), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/814 (66%), Positives = 654/814 (80%), Gaps = 21/814 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V+KRDG++E+V FDKIT R++ L GL + P+ V++KV G+Y GVTT++LD LA
Sbjct: 1 MLVIKRDGRRESVRFDKITTRIENLCNGLDGRYIHPIEVAKKVIDGLYDGVTTTELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE A++T HPDYA LAARI +SNLHK T +SFS T+K +Y H N ++G A LIA DV
Sbjct: 61 AEVCASLTVKHPDYAILAARIAISNLHKTTSQSFSNTMKRLYTHINPKTGDNAALIAPDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y ++ ++AA+LD I Y RDFDYDYFGFKTLERSYL+K+ GKVVERPQHMLMRVA+GIHK
Sbjct: 121 YGVVKQHAAKLDEVIDYQRDFDYDYFGFKTLERSYLIKLDGKVVERPQHMLMRVAIGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+AI+TYH++SQ+WFTHA+PTLFNAGTP+ QLSSCFL+ MK+DSI+GIYDTLK+CA
Sbjct: 181 EDIDAAIETYHLLSQKWFTHATPTLFNAGTPKPQLSSCFLLTMKEDSIDGIYDTLKQCAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+H++RA GSYIRGTNG SNGIVPMLR F+ TARYVDQGGGKRKG+FAVY
Sbjct: 241 ISQSAGGIGLSIHHVRAKGSYIRGTNGVSNGIVPMLRNFDMTARYVDQGGGKRKGSFAVY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+ +FL+L++NHGKEE RARDLFYA+W+PDLFM+RV+ N WSLFCPNEAPGLA
Sbjct: 301 LEPWHADVKDFLELKRNHGKEEMRARDLFYAMWIPDLFMKRVEQNDEWSLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC G EFE+LY KYE+EGKA++ ++AQ LWFEIL+SQIETGTPYML+KD NKKSNQQNL
Sbjct: 361 DCHGEEFEKLYEKYEREGKARETIKAQELWFEILESQIETGTPYMLYKDAANKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I+YTSP E AVCNLASIALP++V G G K YF
Sbjct: 421 GTIKSSNLCTEIIEYTSPDEVAVCNLASIALPKFV-------------ATGKDGKK--YF 465
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D +KL EVT + T NLNK+IDVNYYPVE ARRSN RHRPIG+GVQGLAD FI+L MPFDS
Sbjct: 466 DHQKLYEVTKVATRNLNKVIDVNYYPVEEARRSNFRHRPIGLGVQGLADAFIMLRMPFDS 525
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP-SDRWD 599
EA+ LN+DIFETIY+ ++ TS E+A +G YETY GSP SKG Q D+WGV P S RW
Sbjct: 526 DEAKGLNEDIFETIYFASMETSMELAKIQGTYETYEGSPASKGQFQFDLWGVTPKSGRWA 585
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L++ + K G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RR LSGEF+VVNKH
Sbjct: 586 WNELKEKVKKYGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRTLSGEFIVVNKH 645
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
L+ DL +GLW+ +KN++I +GSVQ IP IP+ +K IYKTVWEI Q+ ++DMA DRG
Sbjct: 646 LMRDLINLGLWNDNMKNRLIAANGSVQNIPGIPQNIKDIYKTVWEISQRIIIDMAADRGA 705
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN 779
YI SQS+N+ M PNFGKLTS+HF+AW +GLKTGMYYLRS+AAA AI+FTVD S L+ +
Sbjct: 706 YICQSQSMNVFMQDPNFGKLTSMHFYAWKKGLKTGMYYLRSQAAASAIQFTVDKSALETD 765
Query: 780 PKVT-----DDDDAKMAQMVCSLTNREECMACGS 808
T K + CSL + E C CGS
Sbjct: 766 KTATATTVDTSRSQKQDAIACSLDDPEGCEMCGS 799
>gi|110636873|ref|YP_677080.1| ribonucleoside diphosphate reductase subunit alpha [Cytophaga
hutchinsonii ATCC 33406]
gi|110279554|gb|ABG57740.1| ribonucleoside diphosphate reductase, alpha subunit [Cytophaga
hutchinsonii ATCC 33406]
Length = 794
Score = 1157 bits (2993), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/812 (66%), Positives = 662/812 (81%), Gaps = 26/812 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V+KRDG++E+V FDKIT+R+++L YGL + + DP V+++V G+Y GVTT +LD LA
Sbjct: 1 MLVLKRDGRRESVKFDKITSRIERLCYGLDMNYVDPTSVAKRVIDGLYDGVTTEELDHLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA+MTT HPDYA+LAARI VSNLHK T KSF+ T+K +Y + + ++G A +I+++V
Sbjct: 61 AETAASMTTKHPDYATLAARIAVSNLHKKTSKSFANTMKRLYTYVDPKTGENASMISNEV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+ I KNAA LDS IIYDRD+ YDYFGFKTLE+SYLLKV GK+VERPQHMLMRV+ GIH
Sbjct: 121 YEFIRKNAAILDSAIIYDRDYGYDYFGFKTLEKSYLLKVDGKIVERPQHMLMRVSCGIHS 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DID+AI+TY++MS+RWFTHA+PTLFN+GTP+ QLSSCFL+ +DDSI+GIY+TLK+CA
Sbjct: 181 GDIDAAIETYNLMSERWFTHATPTLFNSGTPKPQLSSCFLLTTQDDSIDGIYETLKQCAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HNIRATGSYI+GTNGTSNGI+PMLRVFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISQSAGGIGLSIHNIRATGSYIKGTNGTSNGIIPMLRVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+FEFLDLRKNHGKEE RARDLFYA+W+ DLFM+RV+ NG WSLFCP+EAPGLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEMRARDLFYAMWISDLFMKRVEENGDWSLFCPHEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G +FE LY KYEKEG+A+K ++AQ LWF IL++Q+ETGTPYML+KD N+KSNQ+NL
Sbjct: 361 DCYGKDFEALYEKYEKEGRARKTIKAQELWFAILEAQVETGTPYMLYKDAANRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE++++TSP E AVCNLAS+ALP++V N F
Sbjct: 421 GTIKSSNLCTEIMEFTSPEEVAVCNLASLALPKFV--------------------INGKF 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D +KL +VT + T+NLNKIIDVNYYPV A RSN RHRPIG+GVQGLAD FILL MPF+S
Sbjct: 461 DHQKLYDVTYVATKNLNKIIDVNYYPVPEAERSNKRHRPIGLGVQGLADAFILLRMPFES 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP-SDRWD 599
EA+QLN DI ETIYY A+ S ++A + GPYET+ GSPVSKGI Q DMWGV P S R+D
Sbjct: 521 DEAKQLNIDIHETIYYAAMTASKDLAEKLGPYETFKGSPVSKGIFQFDMWGVTPASGRYD 580
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L+ + K+GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEFVVVNKH
Sbjct: 581 WEALKREVKKHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFVVVNKH 640
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL DL ++ LW +KN++I +GSVQ I IP+ +K +YKT WEIK KTL+DM+ DRG
Sbjct: 641 LLKDLIKLNLWDDKMKNRLIEMNGSVQNINNIPQNIKDLYKTAWEIKGKTLIDMSADRGA 700
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV-LKE 778
YI SQSLNI M + NFGKLTS+HF+AW +GLKTGMYYLR+++AA+AI+FTV+ ++
Sbjct: 701 YICQSQSLNIFMPEANFGKLTSMHFYAWNKGLKTGMYYLRTKSAANAIQFTVEKQAEVQL 760
Query: 779 NPKVTD----DDDAKMAQMVCSLTNREECMAC 806
P TD D + K M CSL N E C +C
Sbjct: 761 APGTTDQSIVDAEKKAKDMACSLDNPEGCESC 792
>gi|404450557|ref|ZP_11015538.1| ribonucleoside-diphosphate reductase subunit alpha [Indibacter
alkaliphilus LW1]
gi|403763777|gb|EJZ24720.1| ribonucleoside-diphosphate reductase subunit alpha [Indibacter
alkaliphilus LW1]
Length = 800
Score = 1157 bits (2992), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/816 (66%), Positives = 658/816 (80%), Gaps = 24/816 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V+KRDG++E+V FDKIT+R++ L Y L + P+ V++KV G+Y GVTTS+LD LA
Sbjct: 1 MLVIKRDGRRESVRFDKITSRIENLCYNLDGRYIQPIEVAKKVIDGLYDGVTTSELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE A++T HPDYA LAARI +SNLHK T +SFS T+K +Y + N ++G A LIA DV
Sbjct: 61 AEVCASLTVKHPDYAILAARIAISNLHKTTSQSFSNTMKRLYTYINPKTGENAALIAPDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y I+ K+AAR D I Y RDFDYDYFGFKTLE+SYL+K+ GKVVERPQHMLMRVAVGIHK
Sbjct: 121 YGIVKKHAARFDEAIDYTRDFDYDYFGFKTLEKSYLIKLDGKVVERPQHMLMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI++AI+TY+++S++WFTHA+PTLFNAGTP+ QLSSCFL+ MKDDSI+GIYDTLK+CA
Sbjct: 181 EDIEAAIETYNLLSEKWFTHATPTLFNAGTPKPQLSSCFLLAMKDDSIDGIYDTLKQCAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RA GSYIRGTNG SNGIVPMLR F+ TARYVDQGGGKRKG+FA+Y
Sbjct: 241 ISQSAGGIGLSIHNVRAKGSYIRGTNGVSNGIVPMLRNFDMTARYVDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADI +FL+L++NHGKEE RARDLFYA+W+PDLFM+RV+ N WSLFCPNEAPGL
Sbjct: 301 LEPWHADIKDFLELKRNHGKEEMRARDLFYAMWIPDLFMKRVEQNEDWSLFCPNEAPGLG 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC EFE+LY KYE+EG+A++ ++AQ LWFEIL+SQIETGTPYML+KD+ NKKSNQQNL
Sbjct: 361 DCHSEEFEKLYEKYEREGRARETIKAQELWFEILESQIETGTPYMLYKDSANKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I+YT+P E AVCNLASIALP++V+ G G K +F
Sbjct: 421 GTIKSSNLCTEIIEYTAPDEVAVCNLASIALPKFVK-------------TGPDGKK--FF 465
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D +KL E+T + T NLNK+IDVNYYPVE ARRSN RHRPIG+GVQGLADTFI L MPF+S
Sbjct: 466 DHKKLYEITKVATRNLNKVIDVNYYPVEEARRSNFRHRPIGLGVQGLADTFISLRMPFES 525
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP-SDRWD 599
EA+ LN+DIFETIY+ ++ TS E+A +G YETY GSP SKG LQ DMWGV P S RW+
Sbjct: 526 EEAKGLNEDIFETIYFASVETSMELAKVQGTYETYEGSPASKGQLQFDMWGVTPKSGRWE 585
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W GL+ + K G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RR LSGEF+VVNKH
Sbjct: 586 WDGLKAQVKKYGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRTLSGEFIVVNKH 645
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
L+ DL +GLW+ +KN++I +GSVQ IP IP+ +K IYKTVWEI Q+ ++DMA DRG
Sbjct: 646 LMKDLIRLGLWNDNMKNRLIAANGSVQAIPNIPQNIKDIYKTVWEISQRVVIDMAADRGA 705
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN 779
YI SQS+N+ M PNFGKLTS+HF+AW +GLKTGMYYLRS+AA AI+FTVD S L E
Sbjct: 706 YICQSQSMNVFMQDPNFGKLTSMHFYAWKKGLKTGMYYLRSQAATSAIQFTVDKSAL-EA 764
Query: 780 PKVTD-------DDDAKMAQMVCSLTNREECMACGS 808
K+TD + K + CSL + E C CGS
Sbjct: 765 DKITDAAAAHESNKSQKQDAIACSLDDPEGCEMCGS 800
>gi|436833879|ref|YP_007319095.1| ribonucleoside-diphosphate reductase, alpha subunit [Fibrella
aestuarina BUZ 2]
gi|384065292|emb|CCG98502.1| ribonucleoside-diphosphate reductase, alpha subunit [Fibrella
aestuarina BUZ 2]
Length = 825
Score = 1156 bits (2991), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 547/840 (65%), Positives = 664/840 (79%), Gaps = 47/840 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG++E+V FDKITAR++KL YGL + PV V+ KV G+Y GV T++LD LA
Sbjct: 1 MYVIKRDGRRESVKFDKITARIEKLCYGLDPAYVQPVEVAMKVVNGLYDGVKTTELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA+MTT HPDYA LAAR+ +SNLHK T KSFS TIK +Y + + ++G A LI+ +V
Sbjct: 61 AETAASMTTKHPDYAILAARVAISNLHKETNKSFSGTIKRLYTYIDPKTGENASLISKEV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YD+I NAA LDS IIYDRD+ YDYFG+KTLE+SYLLK+ G++ ERPQHMLMRVAVGIH
Sbjct: 121 YDVIRNNAAVLDSTIIYDRDYGYDYFGYKTLEKSYLLKIDGRIAERPQHMLMRVAVGIHM 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDID+AI+TY+++S++WFTHA+PTLFNAGTP+ Q+SSCFL+ MKDDSIEGIYDTLK+ A
Sbjct: 181 DDIDAAIETYNLLSEKWFTHATPTLFNAGTPKPQMSSCFLLTMKDDSIEGIYDTLKQTAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATG+YI+GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG+FAVY
Sbjct: 241 ISQSAGGIGLSIHNVRATGTYIKGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAVY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+FL L+KNHGKEE RARDLFYA+W PDLFM+RV+ N WSLFCP+E PGL+
Sbjct: 301 LEPWHADIFDFLQLKKNHGKEELRARDLFYAIWTPDLFMKRVEDNDTWSLFCPHECPGLS 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LYT+YE+EG+A++ V+AQ LWFEIL++Q ETGTPYML+KD N+KSNQ+NL
Sbjct: 361 DAYGDEFEELYTRYEREGRARRTVKAQELWFEILEAQTETGTPYMLYKDAANRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+++YTSP E AVCNLASIALP+++ + G+ G F
Sbjct: 421 GTIKSSNLCTEIMEYTSPDEVAVCNLASIALPKFITK-------------GTDGILR--F 465
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D +KL EVT I T NLNKIID+NYYPVE ARRSN+RHRPIG+GVQGLAD FI+L MPF+S
Sbjct: 466 DHQKLMEVTQIATRNLNKIIDLNYYPVEEARRSNMRHRPIGLGVQGLADAFIMLRMPFES 525
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP-SDRWD 599
EA++LN+DIFETIYY A+ S E+A ++GPYET+ GSP+S G Q DMWGV P S RWD
Sbjct: 526 DEARRLNEDIFETIYYGAMTASMELAKKDGPYETWKGSPISNGEFQFDMWGVTPKSGRWD 585
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR + ++GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY+RRVLSGEFVVVNKH
Sbjct: 586 WNALRTQVVEHGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFVVVNKH 645
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL DL ++GLW+ +KN +I +GSVQ IP IP+ LK +YKTVWEIKQK ++DMA DRG
Sbjct: 646 LLRDLVKLGLWNEAMKNNLILANGSVQDIPNIPQHLKDLYKTVWEIKQKHIIDMAADRGA 705
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTV-------- 771
YI SQSLNIH+ NFGKLTS+HF+AW GLKTGMYYLR++AA DA+KFTV
Sbjct: 706 YICQSQSLNIHIQDANFGKLTSMHFYAWKAGLKTGMYYLRTKAATDAVKFTVVQPQAEPQ 765
Query: 772 -DTSVLKENP----------------------KVTDDDDAKMAQMVCSLTNREECMACGS 808
+ ++ + P + + A M CSL + E C CGS
Sbjct: 766 LEPAMAETAPVEKPLDYVGYAKEHAAQASAQAPQVSEAELAYAAMQCSLDDPEGCEMCGS 825
>gi|397531935|gb|AFO54477.1| ribonucleotide reductase large subunit R1ii [Carassius carassius]
Length = 793
Score = 1156 bits (2991), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/812 (66%), Positives = 652/812 (80%), Gaps = 23/812 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG QE V FDKIT+R++KL YGL+ E DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGHQERVMFDKITSRIQKLCYGLNAEFVDPTQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE A +TT HPDYA LAARI VSNLHK TKK FSE ++D+YN+ N +G +P+I+ +
Sbjct: 61 AEITATLTTKHPDYAILAARIAVSNLHKETKKVFSEVMEDLYNYVNPLNGHHSPMISKET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI++ N RL+S II+DRDF Y++FGFKTLERSYLLK+ GKV ERPQHMLMRV+VGIHK
Sbjct: 121 LDIVLANKDRLNSAIIFDRDFSYNFFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI +AI+TY+++S++WFTHASPTLFNAGT R QLSSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIAAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLAMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAMY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIF+FL+L+KN GKEE RARDLFYALW+PDLFM+RV++N WSL CP++ PGL
Sbjct: 301 LEPWHFDIFDFLELKKNTGKEEQRARDLFYALWIPDLFMKRVETNADWSLMCPSDCPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+CWG EFE+LY KYE+EG+AK+VV+AQ LW+ I++SQ ETGTPYML+KD CN+KSNQQNL
Sbjct: 361 ECWGEEFEKLYMKYEQEGRAKRVVKAQQLWYAIIESQTETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YTS E AVCNLASIAL YV + R F
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMYV-------------------TPERTF 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLA VT ++ +NLNKIIDVNYYPV A SN RHRPIGIGVQGLAD FIL+ PF+S
Sbjct: 462 DFQKLASVTKVIVKNLNKIIDVNYYPVREAENSNKRHRPIGIGVQGLADAFILMRFPFES 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LN IFETIYY AL +S E+AA GPYETY GSPVSKGILQ DMW P+D WDW
Sbjct: 522 AEAQLLNTQIFETIYYAALESSCELAAECGPYETYAGSPVSKGILQYDMWEKTPTDLWDW 581
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K+GVRNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 AALKEKITKHGVRNSLLLAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE GLW+ +KN++I +GS+Q IP IP++LK +YKTVWEI QKT++ MA DRG +
Sbjct: 642 LKDLTERGLWNEEMKNQLIAQNGSIQAIPTIPDDLKELYKTVWEISQKTILKMAADRGAF 701
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR++ AA+ I+FT+D LKE
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTKPAANPIQFTLDKEKLKETQ 761
Query: 781 KVTDDDDA----KMAQMVCSLTNREECMACGS 808
+ T +++ A MVCSL NR+EC+ CGS
Sbjct: 762 ESTSNEEETKERNKAAMVCSLENRDECLMCGS 793
>gi|452823074|gb|EME30087.1| ribonucleoside-diphosphate reductase alpha chain [Galdieria
sulphuraria]
Length = 813
Score = 1156 bits (2990), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 547/830 (65%), Positives = 666/830 (80%), Gaps = 41/830 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+VVKRDG+++ V FDKITAR+KKL+YGL D + V+QKVCTGVY GV+TS+LD+LA
Sbjct: 3 MHVVKRDGRKQPVKFDKITARIKKLAYGLD-PMVDIIEVAQKVCTGVYNGVSTSELDDLA 61
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA M+T H DY+ LA+RI +SNLHKNT KSFS+T+ +Y++ + ++ APLIA+D+
Sbjct: 62 AETAAYMSTKHHDYSLLASRIAISNLHKNTLKSFSKTMDILYHYESPKTKAPAPLIAEDI 121
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+ IIMKNA LD IIYDRDF YDYFGFKTLERSYLL+V GKV+ERPQHMLMRVAVGIHK
Sbjct: 122 HSIIMKNAHVLDDAIIYDRDFSYDYFGFKTLERSYLLRVDGKVIERPQHMLMRVAVGIHK 181
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD+++ ++TY MS+++FTHASPTLFNAGTPR QLSSCFL+ M +DSIEGIYDTLK CA+
Sbjct: 182 DDLEAVLETYDYMSRKYFTHASPTLFNAGTPRPQLSSCFLLTMTEDSIEGIYDTLKRCAV 241
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++VH+IRAT SYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 242 ISKSAGGIGLAVHDIRATKSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAIY 301
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIFEFLDLRKNHGKEE+RARDLFY LWVPDLFM+RV+ + WSLFCPNEAPGLA
Sbjct: 302 LEPWHADIFEFLDLRKNHGKEENRARDLFYGLWVPDLFMKRVEKDEKWSLFCPNEAPGLA 361
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DCWG FE+LY KYEKE +A++V+ A+ LWF IL++QIETG PYML+KD CN+KSNQQNL
Sbjct: 362 DCWGEAFEQLYEKYEKEKRARQVIDARKLWFAILEAQIETGNPYMLYKDHCNRKSNQQNL 421
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+ SNLCTE++QYTSP E AVCNLASIAL ++V+ S S+ Y+
Sbjct: 422 GTIRCSNLCTEIVQYTSPDEVAVCNLASIALNQFVQ--------------FSEDSEEPYY 467
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DFE+L VT IVT NLNKIID+NYYPV A+ SNLRHRPIGIGVQGLAD FIL+ +PF+S
Sbjct: 468 DFEQLEHVTKIVTRNLNKIIDINYYPVTQAKTSNLRHRPIGIGVQGLADAFILMRLPFES 527
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LN I ETIYY A+ TS E+A R+G YE++ GSP+S+G+ Q D+W V PS R+DW
Sbjct: 528 DEARRLNIQIAETIYYAAMCTSLELAQRDGAYESFRGSPLSRGLFQFDLWQVKPSARYDW 587
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L + I ++GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY+RRVL+GEF +VN+HL
Sbjct: 588 KTLGEAIQRDGVRNSLLIAPMPTASTSQILGNNECFEPYTSNIYTRRVLAGEFTIVNQHL 647
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
+ DL +GLW+ +KNKII +GSVQ IP+IP++++ +YKT+WE QK L+DMA DRG +
Sbjct: 648 VRDLQRLGLWNNDMKNKIIAYNGSVQHIPEIPQDIRQLYKTIWECSQKRLLDMAADRGAF 707
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN- 779
ID SQSLN+++ PN GKL+S+HFH W +GLKTGMYYLR+R AA+AIKFTVD L +
Sbjct: 708 IDQSQSLNVYIASPNIGKLSSMHFHGWKKGLKTGMYYLRTRPAAEAIKFTVDQQYLSQAV 767
Query: 780 ---------------------PKVTDDDDAKMAQMVCSLTNREECMACGS 808
KV ++D + CSL N E C++CGS
Sbjct: 768 NKSMLLNNNNNNGGEENVSIIRKVPTNED----YLSCSLQNPEGCLSCGS 813
>gi|284041187|ref|YP_003391117.1| ribonucleoside-diphosphate reductase subunit alpha [Spirosoma
linguale DSM 74]
gi|283820480|gb|ADB42318.1| ribonucleoside-diphosphate reductase, alpha subunit [Spirosoma
linguale DSM 74]
Length = 826
Score = 1156 bits (2990), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/842 (64%), Positives = 671/842 (79%), Gaps = 50/842 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+VVKRDG++E+V FDKITAR++KL YGL + PV V+ KV +G+Y GV T++LD LA
Sbjct: 1 MFVVKRDGRRESVKFDKITARIEKLCYGLDPAYVQPVEVAVKVVSGLYDGVKTTELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA+MTT HPDYA LAARI +SNLHK T KSFS TIK +Y + + ++G A LI+ +V
Sbjct: 61 AETAASMTTKHPDYAILAARIAISNLHKETNKSFSGTIKKLYQYEDPKTGENASLISKEV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YD++ ++AA LDS IIYDRD+ YDYFG+KTLE+SYLLK+ G++ ERPQHMLMRVAVGIH+
Sbjct: 121 YDVVRQHAALLDSTIIYDRDYGYDYFGYKTLEKSYLLKLDGRIAERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI+SAI+TY+++S++WFTHA+PTLFNAGTP+ Q+SSCFL+ MKDDSI+GIYDTLK+ A
Sbjct: 181 EDIESAIETYNLLSEKWFTHATPTLFNAGTPKPQMSSCFLLTMKDDSIDGIYDTLKQTAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATG+YI+GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 241 ISQSAGGIGLSIHNVRATGTYIKGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+FLDL+KN GKEE RARDLFYALW PDLFM+RV+ + +WSLFCP+E PGLA
Sbjct: 301 LEPWHADIFDFLDLKKNSGKEEGRARDLFYALWTPDLFMKRVEDDDVWSLFCPHECPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EFE LYT+YE+EG+A++ ++AQ LWF+IL+SQ ETGTPYML+KD NKKSNQ+NL
Sbjct: 361 DCYGDEFEELYTRYEREGRARRTIKAQELWFKILESQTETGTPYMLYKDAANKKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKN-RY 479
GTIKSSNLCTE+I+YT+P E AVCNLASIALP+++ +RG+
Sbjct: 421 GTIKSSNLCTEIIEYTAPDEIAVCNLASIALPKFI----------------TRGTDGIMR 464
Query: 480 FDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFD 539
FD +KL EVT T NLNKIID+NYYPVE ARRSN+RHRPIG+GVQGLAD FI+L MPF+
Sbjct: 465 FDHQKLYEVTKTATRNLNKIIDINYYPVEEARRSNMRHRPIGLGVQGLADAFIMLRMPFE 524
Query: 540 STEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP-SDRW 598
S EA++LN+DIFETIY+ A+ +S E A GPYET+ GSP+S+GI Q DMWGV P S+RW
Sbjct: 525 SEEARRLNEDIFETIYFGAMTSSMEQAKEFGPYETWKGSPISQGIFQFDMWGVKPKSNRW 584
Query: 599 DWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNK 658
DW LR + ++GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY+RRVLSGEFVVVNK
Sbjct: 585 DWESLRKDVVEHGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFVVVNK 644
Query: 659 HLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRG 718
HLL DL ++GLW+ +KN +I +GS+Q IP IP+ +K +YKTVWEIKQK ++DMA DRG
Sbjct: 645 HLLKDLVKLGLWNDAMKNNLILANGSIQAIPNIPQNIKDLYKTVWEIKQKHIIDMAADRG 704
Query: 719 CYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTV------- 771
YI SQSLNIH+ NFGKLTS+HF+AW GLKTGMYYLR++AAADA+KFTV
Sbjct: 705 AYICQSQSLNIHIQDSNFGKLTSMHFYAWKAGLKTGMYYLRTKAAADAVKFTVVQPQAEP 764
Query: 772 ------DTSVLKENP-------------------KVTDDDDAKMAQMVCSLTNREECMAC 806
+V E P + D + + A M CSL + E C C
Sbjct: 765 QLEPVMAEAVTVEKPLDYVQYAKEHAQNATPQPVPMVTDLEQQYAAMTCSLDDPEGCEMC 824
Query: 807 GS 808
GS
Sbjct: 825 GS 826
>gi|397531933|gb|AFO54476.1| ribonucleotide reductase large subunit R1i [Carassius carassius]
Length = 793
Score = 1155 bits (2989), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 537/812 (66%), Positives = 653/812 (80%), Gaps = 23/812 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG+QE V FDKIT+R++KL YGL+ E DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNAEFVDPTHITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE +A +TT HPDYA LAARI VSNLHK TKK FSE ++D+YN+ N + +P+++ +
Sbjct: 61 AEISATLTTKHPDYAILAARIAVSNLHKETKKVFSEAMEDLYNYVNPLNDRHSPMVSKET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI++ N RL+S II+DRDF Y++FGFKTLERSYLLK+ GKV ERPQHMLMRV+VGIHK
Sbjct: 121 LDIVLANKDRLNSAIIFDRDFSYNFFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI +AI+TY+++S++WFTHASPTLFNAGT R QLSSCFL+ MKDDSI+GIYDTLK+CA+
Sbjct: 181 EDIAAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLAMKDDSIDGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAMY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIF+FL+L+KN GKEE RARDLFYALW+PDLFM+RV++NG W L CPN+ PGL
Sbjct: 301 LEPWHFDIFDFLELKKNTGKEEQRARDLFYALWIPDLFMKRVETNGDWCLMCPNDCPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+CWG EFE LYTKYEKEGKAK+VV+AQ LW I++SQ ETGTPYML+KD CN+KSNQQNL
Sbjct: 361 ECWGEEFENLYTKYEKEGKAKRVVKAQQLWHAIIESQTETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YTS E AVCNLAS+AL YV + R F
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASVALNMYV-------------------TPERTF 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLA VT ++ +NLNKIID+NYYPV+ A SN RHRPIGIGVQGLAD FIL+ PF+S
Sbjct: 462 DFQKLASVTKVIVKNLNKIIDINYYPVQEAENSNKRHRPIGIGVQGLADAFILMRFPFES 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LN IFETIYY AL +S E+AA GPYETY GSPVSKGILQ DMW P+D WDW
Sbjct: 522 AEAQLLNTQIFETIYYAALESSCELAAEFGPYETYAGSPVSKGILQYDMWDKTPTDLWDW 581
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K+GVRNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 EALKEKIAKHGVRNSLLLAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE GLW+ +KN++I +GS+Q IP IP++LK +YKTVWEI QKT++ MA DRG +
Sbjct: 642 LKDLTERGLWNEEMKNQLIAQNGSIQGIPTIPDDLKELYKTVWEISQKTILKMAADRGAF 701
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR++ AA+ I+FT++ LKE
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTKPAANPIQFTLNKEKLKETQ 761
Query: 781 KVTDDDDA----KMAQMVCSLTNREECMACGS 808
K +++ MA MVCSL NR+EC+ CGS
Sbjct: 762 KSASNEEEIKELNMAAMVCSLENRDECLMCGS 793
>gi|167524415|ref|XP_001746543.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774813|gb|EDQ88439.1| predicted protein [Monosiga brevicollis MX1]
Length = 784
Score = 1155 bits (2989), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/808 (65%), Positives = 658/808 (81%), Gaps = 24/808 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDG+ E V FDKIT R++KLS+GL+ ++ +PV +++KV GVY GV T+QLD+LA
Sbjct: 1 MYVVKRDGRHEPVLFDKITNRVEKLSFGLNRDYVEPVEITKKVMAGVYSGVHTTQLDQLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA+ TT HPDYA LAARI VSNLHK T KSFS+T+K ++ + N ++G APL++D+
Sbjct: 61 AETAASFTTRHPDYAILAARISVSNLHKQTNKSFSQTMKALHEYVNPKTGKLAPLVSDET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+ +I KN LDS +IYDRDF++++FGFKTLERSYLLK+ G+VVERPQHM MRV+VGIH
Sbjct: 121 WAVIEKNKELLDSHVIYDRDFNFNFFGFKTLERSYLLKINGQVVERPQHMFMRVSVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D++D+ ++TY+ MSQ FTHASPTLFN+GTP AQLSSCFLV MKDDSI+GIYDTL CA+
Sbjct: 181 DNLDAVLETYNHMSQGLFTHASPTLFNSGTPLAQLSSCFLVSMKDDSIKGIYDTLTTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGG+G+S+HN+RA+GSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFAVY
Sbjct: 241 ISKTAGGVGLSIHNVRASGSYIAGTNGESNGLVPMLRVYNNTARYVDQGGNKRPGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+FEFLDL+KNHG +E RARDLFYALWVPDLFM+RV+ N W+L CP+E PGLA
Sbjct: 301 LEPWHADVFEFLDLKKNHGSDELRARDLFYALWVPDLFMKRVERNEQWTLMCPHECPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EFE LY +YE+EG+ +K + AQ LWF IL+SQ ETGTPYML+KD CN+KSNQ+NL
Sbjct: 361 DCYGAEFEALYERYEREGRGRKTIDAQKLWFAILESQTETGTPYMLYKDACNEKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+ SNLCTE+++Y++P E AVCNLAS+ALP++V E R +
Sbjct: 421 GTIRCSNLCTEIVEYSAPDEVAVCNLASLALPKFVNE------------------DTRTY 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DFE+L +V IVT NLN+IID+NYYPV A+ SN+RHRPIGIGVQGLAD FIL+ +PFDS
Sbjct: 463 DFERLHDVVKIVTRNLNRIIDINYYPVPEAKNSNMRHRPIGIGVQGLADAFILMRLPFDS 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+ LNK IFETIY+ AL S EIA R+GPY+TY GSPVS+G LQ DMWG+ P+D+WDW
Sbjct: 523 PEARDLNKRIFETIYHAALEASCEIAQRDGPYKTYEGSPVSQGTLQYDMWGITPTDQWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+++GVRNSLLVAPMPTAST+QILGNNE EPYTSNIYSRRVLSG+F VVNKHL
Sbjct: 583 AALKAKIAEHGVRNSLLVAPMPTASTAQILGNNESIEPYTSNIYSRRVLSGDFQVVNKHL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL E+G+WS IK +II ++GS+Q I IP+++KA+YKTVWE+ Q+TL+D+A DRG +
Sbjct: 643 LKDLVELGIWSNDIKQQIILNNGSIQAIAGIPDDIKALYKTVWELSQRTLIDLAADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQS N+HM +PNFGKLTS+HF+AW +GLKTGMYYLR+RAAA AIKFT+D + KE
Sbjct: 703 IDQSQSFNVHMGEPNFGKLTSMHFYAWKQGLKTGMYYLRTRAAASAIKFTIDATKAKEQ- 761
Query: 781 KVTDDDDAKMAQMVCSLTNREECMACGS 808
+ + A MVCSLTN E C+ C +
Sbjct: 762 -----QEKEEAAMVCSLTNPEGCLMCSA 784
>gi|255037023|ref|YP_003087644.1| ribonucleoside-diphosphate reductase subunit alpha [Dyadobacter
fermentans DSM 18053]
gi|254949779|gb|ACT94479.1| ribonucleoside-diphosphate reductase, alpha subunit [Dyadobacter
fermentans DSM 18053]
Length = 814
Score = 1154 bits (2984), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 537/829 (64%), Positives = 673/829 (81%), Gaps = 36/829 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG++E+V FDK+TAR++KLSYGL + PV V++KV +G+Y GVTT++LD LA
Sbjct: 1 MYVIKRDGRRESVKFDKVTARIEKLSYGLDATYVQPVEVAKKVVSGIYDGVTTAELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA+MTT HPDYA LAAR+ +SNLHKNT KSFS T+K +Y + + ++G A LI+ +V
Sbjct: 61 AETAASMTTKHPDYAILAARVAISNLHKNTLKSFSATMKRLYTYIDSKTGENASLISREV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y++I +NA+ LDS IIYDRD+ YDYFG+KTLE+SYLLKV+GK+VERPQHMLMRVA+GIH+
Sbjct: 121 YEVIRQNASLLDSTIIYDRDYSYDYFGYKTLEKSYLLKVEGKIVERPQHMLMRVAIGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+D+ +AI+TYH++S++WFTHA+PTLFNAGTP+ Q+SSCFL+ MK+DSI GIYDTLK CA+
Sbjct: 181 EDVQAAIETYHLLSEKWFTHATPTLFNAGTPKPQMSSCFLLTMKEDSINGIYDTLKNCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+H++RATG+YI+GTNG SNGIVPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 241 ISQSAGGIGLSIHDVRATGTYIKGTNGQSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWH+DIF+FLDL+KNHGKEE RARDLFYALW+PDLFM+RV++N WSLFCP+E PGLA
Sbjct: 301 IEPWHSDIFDFLDLKKNHGKEEQRARDLFYALWIPDLFMKRVEANDTWSLFCPHECPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D EFE+LY +YE+EG+A+K ++AQ+LWF I++SQIETGTPYML+KD N KSNQQNL
Sbjct: 361 DTHSEEFEKLYEQYEREGRARKTIKAQDLWFAIMESQIETGTPYMLYKDHANSKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I+YT+P E AVCNLASIALP++V + G+ G +F
Sbjct: 421 GTIKSSNLCTEIIEYTAPDEVAVCNLASIALPKFVEQ-------------GADGF--MHF 465
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D +KL E+T +VT NLNKIID+N+YPV A +SN RHRPIGIGVQGLAD F ++ MPFDS
Sbjct: 466 DHQKLYEITKVVTRNLNKIIDLNFYPVPEAEKSNKRHRPIGIGVQGLADAFCMMRMPFDS 525
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP-SDRWD 599
EA++LNKDIFETIYY ++ S E+A + GPYET+ GSP+S+G+ Q DMW V P S RW+
Sbjct: 526 DEARRLNKDIFETIYYGSMEASMELAMQNGPYETWAGSPISQGVFQFDMWNVTPESKRWN 585
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR + +NGVRNSLL+APMPTASTSQILGNNECFEP+TSNIY RRVLSGEFVVVNK+
Sbjct: 586 WEKLRKEVVQNGVRNSLLLAPMPTASTSQILGNNECFEPFTSNIYVRRVLSGEFVVVNKY 645
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL DL +GLWS +KN ++ GSVQ IP IP+ +K +YKT WEIKQ++L+DM+ DRG
Sbjct: 646 LLKDLVRLGLWSEEMKNNLVRASGSVQAIPNIPQNIKDLYKTAWEIKQRSLLDMSADRGA 705
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD------- 772
YI SQSLNI M++ NFGKLTS+HF+AW +GLKTGMYYLR+RAA+D ++FTV
Sbjct: 706 YICQSQSLNIFMEEANFGKLTSMHFYAWKKGLKTGMYYLRTRAASDPVQFTVSKQAEPQL 765
Query: 773 ---TSVLKE---NPKVTDDDDAKMA-------QMVCSLTNREECMACGS 808
T+V+ E N ++ AK A M CSL + E C ACGS
Sbjct: 766 EPATAVVAEKELNYVQYAEEHAKPAAPRDNRSDMQCSLDDPEGCEACGS 814
>gi|313675914|ref|YP_004053910.1| ribonucleoside-diphosphate reductase subunit alpha [Marivirga
tractuosa DSM 4126]
gi|312942612|gb|ADR21802.1| ribonucleoside-diphosphate reductase, alpha subunit [Marivirga
tractuosa DSM 4126]
Length = 826
Score = 1153 bits (2983), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 540/841 (64%), Positives = 662/841 (78%), Gaps = 48/841 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M VVKRDG++E V FDKITAR++KL YGL + + P+ V++KV G+Y GVTT +LD LA
Sbjct: 1 MLVVKRDGRRETVKFDKITARIEKLCYGLDLNYIQPIDVARKVINGIYDGVTTQELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA+MT HPDY+ L+ARI +SNLHK T KSFS T+K +Y + + ++G APL++ +
Sbjct: 61 AETAASMTVKHPDYSKLSARIAISNLHKTTSKSFSNTMKRLYTYVDAKTGQNAPLLSTET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y II K+AA+LDS IIYDRDF YD+FGFKTLERSYL+KV GK+VERPQHMLMRVA+GIH
Sbjct: 121 YGIIKKHAAQLDSAIIYDRDFGYDFFGFKTLERSYLMKVDGKIVERPQHMLMRVAIGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI+SAIKTY++MS++WFTHA+PTLFNAGTP+ QLSSCFL+ +++DSI+GIYDTLK+ A
Sbjct: 181 EDIESAIKTYNLMSEKWFTHATPTLFNAGTPKPQLSSCFLLTIQEDSIDGIYDTLKQTAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYI+GT G SNGIVPMLR F+ TARYVDQGGGKRKG+FA+Y
Sbjct: 241 ISQSAGGIGLSIHNVRATGSYIKGTGGVSNGIVPMLRNFDMTARYVDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+FLDL+KNHGKEE RARDLFYA+W+ DLFM+RV++N W+LF PNEA GL
Sbjct: 301 LEPWHADIFDFLDLKKNHGKEEMRARDLFYAMWMSDLFMKRVEANAEWTLFDPNEASGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ +G +FE+LY KYE+EGK +K V+AQ LWFEIL+SQIETGTPYML+KD NKKSNQ+NL
Sbjct: 361 EAYGDDFEKLYEKYEREGKGRKTVKAQELWFEILESQIETGTPYMLYKDAANKKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+++YTS E AVCNLASIALP +V+E G K +F
Sbjct: 421 GTIKSSNLCTEILEYTSKDEVAVCNLASIALPMFVQE-------------DENGQK--FF 465
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D +KL ++T T NLN++IDVNYYPVE AR SN+RHRPIG+GVQGLAD F+LL PFDS
Sbjct: 466 DHDKLYDITYTATVNLNRVIDVNYYPVEEARTSNMRHRPIGLGVQGLADAFMLLRYPFDS 525
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
E+++LNK+IFETIY+ A+ S ++A +EGPYETY GSPVSKGI Q DMW V P+DRWDW
Sbjct: 526 EESRKLNKEIFETIYFAAMTASKDLAVKEGPYETYKGSPVSKGIFQFDMWNVEPTDRWDW 585
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ + KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RR LSGEFVVVNKHL
Sbjct: 586 TTLKQEVKKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRTLSGEFVVVNKHL 645
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
+ DL E G+W+ +KNK+I +GSVQ I IP+++K +YKTVWEI QK ++DMA DRG Y
Sbjct: 646 MRDLIERGMWNDNMKNKLIAANGSVQDIADIPQDIKELYKTVWEISQKAIIDMAADRGAY 705
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE-- 778
I SQS+N+ M PNFGK+TS+HF+AW +GLKTGMYYLRS+AA AI+FTVD S L E
Sbjct: 706 ICQSQSMNLFMQDPNFGKMTSMHFYAWKKGLKTGMYYLRSKAATSAIQFTVDKSQLNEPQ 765
Query: 779 ----------------------------NPKVTDDDDA---KMAQMVCSLTNREECMACG 807
P+ +DD K AQ+ CSL N ++C CG
Sbjct: 766 PEQKPQDITQSTDTKVNRPQNSVGTQGQGPQANAEDDLAALKAAQVACSLDNPDDCEMCG 825
Query: 808 S 808
S
Sbjct: 826 S 826
>gi|387789963|ref|YP_006255028.1| ribonucleoside-diphosphate reductase subunit alpha [Solitalea
canadensis DSM 3403]
gi|379652796|gb|AFD05852.1| ribonucleoside-diphosphate reductase, alpha subunit [Solitalea
canadensis DSM 3403]
Length = 788
Score = 1153 bits (2982), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 547/810 (67%), Positives = 653/810 (80%), Gaps = 24/810 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG+ E+V FDKITAR++KLSYGL H D + V++KV G+Y GVTTS+LD LA
Sbjct: 1 MFVIKRDGRTESVKFDKITARIEKLSYGLDSNHVDSIDVAKKVIEGLYDGVTTSELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA++T HPDYA LA+RI VSNLHKNT+KSFS+T++ +YN+ + ++GL A L++DDV
Sbjct: 61 AETAASLTVKHPDYALLASRIAVSNLHKNTEKSFSKTMERLYNYIDPKTGLNAQLLSDDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+II +NA LDS IIYDRDF +DYFGFKTLERSYLLK+ G+V ERPQHM MRVAVGIHK
Sbjct: 121 IEIIRQNADTLDSNIIYDRDFAFDYFGFKTLERSYLLKLNGRVAERPQHMYMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DIDS IKTY++MS++WFTHA+PTLFNAGTP+ Q+SSCFL+ MKDDSIEGIYDTLK+ A
Sbjct: 181 EDIDSVIKTYNLMSEKWFTHATPTLFNAGTPKPQMSSCFLLTMKDDSIEGIYDTLKQTAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HNIRATGSYI GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISQSAGGIGLSIHNIRATGSYISGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+FLDLRKNHGKEE RARDLFYALW+PDLFM+RV+SNG WSLFCP+EAPGL
Sbjct: 301 LEPWHADIFDFLDLRKNHGKEELRARDLFYALWIPDLFMKRVESNGEWSLFCPHEAPGLY 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G +FE LY +YEKEGKA+K V+AQ LWF I+ SQIETGTPYML+KD NKKSNQQNL
Sbjct: 361 DTYGDDFEALYERYEKEGKARKTVKAQELWFAIMDSQIETGTPYMLYKDAANKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+++YT+ E AVCNLASI+LP++V N F
Sbjct: 421 GTIKSSNLCTEIMEYTAEDEVAVCNLASISLPKFV--------------------INGEF 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D +KL EVT T NLNKIID NYYPVE AR SNLRHRP+G+G+QGLAD FI+L PF+S
Sbjct: 461 DHQKLYEVTYQATLNLNKIIDGNYYPVEEARNSNLRHRPVGLGIQGLADVFIMLRHPFES 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LN++I ETIY+ AL S ++A +GPYETY GSP SKGILQ DMW V PS RWD+
Sbjct: 521 AEAQSLNREIAETIYFAALSASKDLAKVDGPYETYEGSPSSKGILQYDMWNVTPSKRWDF 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
GL+ I K G+RNSLLVAPMPTASTSQI GNNECFEPYTSNIY RRVLSGEF+VVNKHL
Sbjct: 581 DGLKKEIKKYGIRNSLLVAPMPTASTSQIFGNNECFEPYTSNIYVRRVLSGEFIVVNKHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL + LW +KNKII +GS+Q I +IP+ +K +YKTVWEIKQ+TL+DMA DRG Y
Sbjct: 641 LKDLVALNLWDGQMKNKIIAAEGSIQDIKEIPQHIKELYKTVWEIKQRTLIDMAADRGAY 700
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE-N 779
SQSLN+ + PN KLTS+HF+AW +GLKTGMYYLR++AA A+KFTV+ K+
Sbjct: 701 TCQSQSLNLFVQSPNNAKLTSMHFYAWKKGLKTGMYYLRTQAANAAVKFTVEKQAEKQLE 760
Query: 780 PKVTDDD-DAKMAQMVCSLTNREECMACGS 808
P V + ++ VC++ E C+ C +
Sbjct: 761 PMVQHTGVEEEITGPVCTM--EEGCVTCSA 788
>gi|348672398|gb|EGZ12218.1| hypothetical protein PHYSODRAFT_246827 [Phytophthora sojae]
Length = 788
Score = 1152 bits (2981), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 536/809 (66%), Positives = 652/809 (80%), Gaps = 22/809 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG+QE V FDKITAR+ KL YGL+ ++ D + +SQKV GVY GVTTS+LDELA
Sbjct: 1 MYVIKRDGRQEDVKFDKITARITKLCYGLNPDYVDAIKISQKVVAGVYPGVTTSELDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +T HPD++ LAARI VSNLHKNT K FS+ I+ + + +E++G APLIADDV
Sbjct: 61 AETAAYQSTQHPDFSKLAARIAVSNLHKNTNKVFSDNIEVFHKNIHEKTGAAAPLIADDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+I+M++ L+S II+DRDF+YDYFGFKTLER YL +V GKVVERPQ M+MRVA+GIHK
Sbjct: 121 YEIVMQHKDELNSAIIHDRDFEYDYFGFKTLERGYLFRVNGKVVERPQQMIMRVALGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI +A++TY +MSQ++FTHA+PTLFNAGTPR QLSSCFL+ M+DDSIEGIYDTLK+CA
Sbjct: 181 SDIKAALETYELMSQKFFTHATPTLFNAGTPRPQLSSCFLLAMQDDSIEGIYDTLKQCAC 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+HNIRAT SYIRGTNG+SNGI+PMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 241 ISKWAGGIGISMHNIRATNSYIRGTNGSSNGIIPMLRVFNDTARYVDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+FEFLDLRKNHG E HRARDLFYALWVPDLFM+RV++NG WSLFCPNEAPGL
Sbjct: 301 LEPWHADVFEFLDLRKNHGNELHRARDLFYALWVPDLFMKRVEANGKWSLFCPNEAPGLY 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+CWG EFE LY KYEKEG+A+K + AQ LWF IL +QIETG P+ML+KD N+KSNQQNL
Sbjct: 361 ECWGEEFETLYEKYEKEGRARKTINAQQLWFAILDAQIETGVPFMLYKDAANRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLC EV++YTSP E AVCNLAS+ALP++V E GV F
Sbjct: 421 GTIRSSNLCCEVMEYTSPDEVAVCNLASVALPKFVEE-GV-------------------F 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D++KL EVT ++T NLNK+IDVNYYPV AR+SN+RHRPIGIGVQGLAD FIL+ F+S
Sbjct: 461 DYQKLYEVTKVITRNLNKVIDVNYYPVAEARKSNMRHRPIGIGVQGLADAFILMNFAFES 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP-SDRWD 599
EA++LNK IFETIYY A+ TS EIA GPYET+ GSP SKGI Q DMWGV P SD W+
Sbjct: 521 EEARELNKKIFETIYYAAMETSMEIAKELGPYETFQGSPASKGIFQFDMWGVTPSSDLWN 580
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L++ + K+G+RNSLLVAPMPTAST+QILGNNE EPYTSN+Y+RRVL+GEF +VNK+
Sbjct: 581 WAALKENVIKHGLRNSLLVAPMPTASTAQILGNNESIEPYTSNMYNRRVLAGEFTIVNKY 640
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
L+ +L E+G+W+P ++N+I+ D GSVQK+ IP+ +K YKTVWEIKQK ++D++ DRG
Sbjct: 641 LMKELIELGIWTPDVRNQILNDGGSVQKVKAIPDHVKEKYKTVWEIKQKAVLDLSADRGA 700
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN 779
YI SQSLNIH+ P KLTS+HF+AW +GLKTGMYY+R R ADAIKFTVD L
Sbjct: 701 YICQSQSLNIHIADPTISKLTSMHFYAWKKGLKTGMYYMRGRPKADAIKFTVDKQGLDLQ 760
Query: 780 PKVTDDDDAKMAQMVCSLTNREECMACGS 808
P T + + + + +EC+ CG+
Sbjct: 761 P-ATPAPAPQTETVARAGDDEDECLVCGA 788
>gi|390945294|ref|YP_006409055.1| ribonucleoside-diphosphate reductase subunit alpha [Belliella
baltica DSM 15883]
gi|390418722|gb|AFL86300.1| ribonucleoside-diphosphate reductase, alpha subunit [Belliella
baltica DSM 15883]
Length = 799
Score = 1152 bits (2979), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/814 (66%), Positives = 658/814 (80%), Gaps = 21/814 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V+KRDG++E+V FDKIT+R++KL YGL + P+ V++KV G+Y GVTT++LD LA
Sbjct: 1 MLVIKRDGRRESVRFDKITSRIEKLCYGLDDRYIQPIEVAKKVIDGLYDGVTTTELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE A++T HP+YA+LAARI VSNLHK T +SFS T+K +Y + N ++ A LIA DV
Sbjct: 61 AEICASLTVRHPEYATLAARIAVSNLHKTTSQSFSNTMKRLYTYINPKTEENAALIASDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y I+ K+AA+LD I Y+RDF YDYFGFKTLERSYL+++ GKVVERPQHMLMRVAVGIHK
Sbjct: 121 YGIVKKHAAKLDEAIDYNRDFAYDYFGFKTLERSYLIRLDGKVVERPQHMLMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+AI+TY+++S++WFTHA+PTLFNAGTP+ QLSSCFL+ MKDDSI+GIYDTLK+ A
Sbjct: 181 EDIDAAIETYNLLSEKWFTHATPTLFNAGTPKPQLSSCFLLTMKDDSIDGIYDTLKQTAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RA GSYI+GTNG SNGIVPMLR F+ TARYVDQGGGKRKG+FA+Y
Sbjct: 241 ISQSAGGIGLSIHNVRAKGSYIKGTNGVSNGIVPMLRNFDMTARYVDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+ +FL+L++NHGKEE RARDLFYA+W+PDLFM RV+ N WSLFCPNEAPGLA
Sbjct: 301 LEPWHADVKDFLELKRNHGKEEMRARDLFYAMWIPDLFMRRVEQNESWSLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC EF++LY KYE+EG+A++ ++AQ LWFEIL+SQIETGTPYML+KD NKKSNQQNL
Sbjct: 361 DCHSEEFDKLYEKYEREGRARETIKAQELWFEILESQIETGTPYMLYKDAANKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I+YTSP E AVCNLASIALP++V E G G K F
Sbjct: 421 GTIKSSNLCTEIIEYTSPDEVAVCNLASIALPKFVVE-------------GKDGVKK--F 465
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D +KL E+T + T NLNK+IDVNYYPVE A+RSN RHRPIG+GVQGLAD FILL MPFDS
Sbjct: 466 DHQKLYEITKVATRNLNKVIDVNYYPVEEAKRSNFRHRPIGLGVQGLADAFILLRMPFDS 525
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP-SDRWD 599
EA++LN+DI ET+Y+ A+ TS EIA EG YETY GSPVSKG Q D W V P S+RW+
Sbjct: 526 DEARRLNEDIAETMYFAAMETSMEIAKVEGTYETYAGSPVSKGQFQFDHWAVQPKSNRWN 585
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L++ + K GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY+RR LSGEF+VVNKH
Sbjct: 586 WNDLKEKVKKYGVRNSLLIAPMPTASTSQILGNNECFEPYTSNIYTRRTLSGEFIVVNKH 645
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
L+ DL +GLW+ +KN++I +GSVQ IP IP+ +K +YKTVWEI QKT++DMA DRG
Sbjct: 646 LMRDLINLGLWNDNMKNRLIAANGSVQNIPGIPQNIKDLYKTVWEISQKTIIDMAADRGA 705
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN 779
YI SQS+N+ + PNFGKLTS+HF+AW +GLKTGMYYLRS+AA AI+FTVD S L +
Sbjct: 706 YICQSQSMNVFLQDPNFGKLTSMHFYAWKKGLKTGMYYLRSQAATSAIQFTVDKSALVDT 765
Query: 780 PKVTDDDDAKMAQ-----MVCSLTNREECMACGS 808
P D ++Q + CSL N ++C CGS
Sbjct: 766 PTNQVSIDTSVSQQKQDAIACSLDNPDDCEMCGS 799
>gi|189501949|ref|YP_001957666.1| hypothetical protein Aasi_0536 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497390|gb|ACE05937.1| hypothetical protein Aasi_0536 [Candidatus Amoebophilus asiaticus
5a2]
Length = 790
Score = 1151 bits (2978), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 536/809 (66%), Positives = 655/809 (80%), Gaps = 20/809 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M VVKRDG+ E+V FDKITAR++KL GL+ ++ +PV ++ KV G+Y VTT +LD LA
Sbjct: 1 MLVVKRDGRYESVKFDKITARIEKLCTGLNTDYINPVDIAMKVIAGIYDKVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA+M T HPDY LAARI VSNLHK T +SFS T+K +Y + + ++G A LIA DV
Sbjct: 61 AEIAASMATKHPDYTVLAARIAVSNLHKVTSESFSNTMKWLYTYIDPKTGENASLIASDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y +I ++AA LD I+Y RD+DYDYFGFKTLERSYLLK+ GK+VERPQHMLMRVAVGIHK
Sbjct: 121 YKVIREHAALLDKTIVYKRDYDYDYFGFKTLERSYLLKINGKIVERPQHMLMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI++AI+TYH++S+RWFTHA+PTLFNAGTP+ QLSSCFL+ MK+DSIEGIYDTLK+CA
Sbjct: 181 EDIEAAIQTYHLLSERWFTHATPTLFNAGTPKPQLSSCFLLTMKEDSIEGIYDTLKQCAQ 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HNIRATGSYI+GTNG SNGIVPMLR F+ TARYVDQGGG+RKG+FA+Y
Sbjct: 241 ISQSAGGIGLSIHNIRATGSYIKGTNGISNGIVPMLRNFDMTARYVDQGGGRRKGSFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DIFEFLDLRKNHGKEE RARDLFYALW+PDLFM+RV++N WSLFCPNE+PGLA
Sbjct: 301 LEPWHSDIFEFLDLRKNHGKEELRARDLFYALWIPDLFMQRVENNEEWSLFCPNESPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EFERLY KYE+EGKA+K V+AQ LWF IL++QIETG P+ML+KD+ N+KSNQQNL
Sbjct: 361 DCYGEEFERLYKKYEREGKARKSVKAQELWFAILEAQIETGMPFMLYKDSANRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I++TSP E AVCNLASIALP+++ + G F
Sbjct: 421 GTIKSSNLCTEIIEFTSPEEVAVCNLASIALPKFINQAG-------------------KF 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D +KL E+T ++T+NLNKIID+N+YPV AR SN RHRPIGIGVQGLADTF+ L MPFDS
Sbjct: 462 DHQKLYEITYVITKNLNKIIDINHYPVPEARTSNFRHRPIGIGVQGLADTFLRLRMPFDS 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSD-RWD 599
EA+ LNKDIFETIY+ A+ S ++A + GPYET+ GSP+SKGI Q DMWGV PS RWD
Sbjct: 522 PEARGLNKDIFETIYFAAMTASKDLAKQYGPYETFKGSPISKGIFQFDMWGVEPSSGRWD 581
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR + +GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVNKH
Sbjct: 582 WETLRKEVQLHGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 641
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL DL +GLW +KN++I +GSVQ+I +IP+ +K +++TVWEI QK ++DMA DRG
Sbjct: 642 LLTDLINLGLWDENMKNELIAANGSVQRIDRIPQHIKELHRTVWEIPQKAIIDMAADRGA 701
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN 779
+I SQS+NIH+ NF KLTS+HF+AW +GLKTG+YYLR+R AADAIKFT+ +
Sbjct: 702 FICQSQSMNIHLLDANFAKLTSMHFYAWKKGLKTGLYYLRTRPAADAIKFTLQKEQALND 761
Query: 780 PKVTDDDDAKMAQMVCSLTNREECMACGS 808
V + MVC + E+C+ CGS
Sbjct: 762 IPVPQKKVEQQVSMVCDAEDSEDCLVCGS 790
>gi|311748426|ref|ZP_07722211.1| ribonucleoside-diphosphate reductase, alpha subunit [Algoriphagus
sp. PR1]
gi|126576939|gb|EAZ81187.1| ribonucleoside-diphosphate reductase, alpha subunit [Algoriphagus
sp. PR1]
Length = 799
Score = 1149 bits (2973), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 537/816 (65%), Positives = 659/816 (80%), Gaps = 25/816 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V+KRDG++E+V FDKITAR++ L Y L + P+ V++KV G+Y GVTTS+LD LA
Sbjct: 1 MLVIKRDGRRESVRFDKITARIENLCYELDPKFIQPIEVAKKVIDGLYDGVTTSELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE A++T HPDYA LAARI +SNLHK T +SFS T+K +Y + N ++G A LI +V
Sbjct: 61 AEVCASLTVKHPDYAILAARIAISNLHKTTSQSFSNTMKRLYTYINPKTGGNASLIDPEV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y ++ KNAA+LD+ I Y RDF YDYFG+KTLERSYL+++ GKVVERPQHMLMRVAVGIHK
Sbjct: 121 YGVVKKNAAKLDAIIDYKRDFGYDYFGYKTLERSYLIRLDGKVVERPQHMLMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+A++TYH++S++WFTHA+PTLFNAGTP+ QLSSCFL+ MKDDSI+GIYDTLK+CA
Sbjct: 181 EDIDAAVETYHLLSEKWFTHATPTLFNAGTPKPQLSSCFLLTMKDDSIDGIYDTLKQCAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+H++RA GSYI+GTNG SNGIVPMLR F+ TARYVDQGGGKRKG+FA+Y
Sbjct: 241 ISQSAGGIGLSIHHVRAKGSYIKGTNGVSNGIVPMLRNFDMTARYVDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+ +FLDL++NHGKEE RARDLFYALW+ DLFM+RV+ N WSLFCPNEAPGL+
Sbjct: 301 LEPWHADVKDFLDLKRNHGKEEMRARDLFYALWISDLFMKRVEQNETWSLFCPNEAPGLS 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EFERLY KYEKEG+A++ V+AQ LWFEIL+SQIETGTPYML+KD NKKSNQQNL
Sbjct: 361 DCYGEEFERLYEKYEKEGRARETVKAQELWFEILESQIETGTPYMLYKDAANKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I+YT+P E AVCNLAS+ALP++VR G G +F
Sbjct: 421 GTIKSSNLCTEIIEYTAPDEVAVCNLASLALPKFVR-------------TGPDG--KLFF 465
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D +KL E+T + T NLNK+IDVNYYPV+ ARRSN RHRPIG+GVQGLAD FI+L MPF+S
Sbjct: 466 DHQKLYEITKVATRNLNKVIDVNYYPVDEARRSNFRHRPIGLGVQGLADAFIMLRMPFES 525
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP-SDRWD 599
EA+ LN+DIFETIYY A+ TS E+A EG YETY GSP SKGILQ DMWGV P S+RW+
Sbjct: 526 AEAKGLNEDIFETIYYAAVETSMELAKVEGTYETYEGSPASKGILQFDMWGVTPKSERWN 585
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L++ + K G+RNSLLVAPMPTASTSQILGNNECFEPYT+NIY+RR LSGEF+VVNKH
Sbjct: 586 WTELKEKVKKVGLRNSLLVAPMPTASTSQILGNNECFEPYTTNIYTRRTLSGEFIVVNKH 645
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
L+ DL +GLW ++N++I +GSVQ +P +P+ +K +YKTVWEI QK ++D+A DRG
Sbjct: 646 LMKDLIRLGLWDDNMRNRLISTNGSVQSLPGVPQNIKDLYKTVWEISQKVIIDLAADRGA 705
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN 779
YI SQS+N+ + PNFGKLTS+HF+AW +GLKTGMYYLRS+AAA AIKFT+D S L+
Sbjct: 706 YICQSQSMNVFLQDPNFGKLTSMHFYAWKKGLKTGMYYLRSQAAASAIKFTLDKSNLE-- 763
Query: 780 PKV-------TDDDDAKMAQMVCSLTNREECMACGS 808
PKV D K + CSL + + C CGS
Sbjct: 764 PKVDKAMQEEIDAKSLKQDAISCSLDDPDGCEMCGS 799
>gi|308798579|ref|XP_003074069.1| RIR1_BRARE Ribonucleoside-diphosphate reductase large subunit (ISS)
[Ostreococcus tauri]
gi|116000241|emb|CAL49921.1| RIR1_BRARE Ribonucleoside-diphosphate reductase large subunit (ISS)
[Ostreococcus tauri]
Length = 840
Score = 1149 bits (2971), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 567/857 (66%), Positives = 665/857 (77%), Gaps = 69/857 (8%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPV--------------LVSQKVCTG 46
+YVVKRDG++E V FDKITAR+KKL+YGLS E CDPV +V+QKVC G
Sbjct: 4 LYVVKRDGREEPVAFDKITARIKKLAYGLSQEFCDPVRTDHGRLHLPHSQVIVAQKVCMG 63
Query: 47 VYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYN 106
V+ GVTT +LDELAAETAA+MT+ HPDYA LAARI VSNLHK T KSFSET+K MY H N
Sbjct: 64 VFAGVTTKELDELAAETAASMTSKHPDYALLAARISVSNLHKTTVKSFSETMKVMYEHVN 123
Query: 107 ERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVER 166
+R+G +PL+ADDVY+IIM NA +LD+E++YDRDFDYDYFGFKTLERSYLL++ GKVVER
Sbjct: 124 KRNGKWSPLLADDVYEIIMANAEKLDAELVYDRDFDYDYFGFKTLERSYLLRIDGKVVER 183
Query: 167 PQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDD 226
PQH+LMRV++GIHK DI+ AI TYHM+S+RW THASPTLFNAGTPR QLSSCFL+CMK+D
Sbjct: 184 PQHLLMRVSIGIHKTDIEKAIDTYHMLSERWMTHASPTLFNAGTPRPQLSSCFLICMKED 243
Query: 227 SIEGIYDTLKECAIISKSAGGIGVSVH--NIRATGSYIRGTNGTSNGIVPMLRVFNDTAR 284
SIEGIYDTLKECA ISKSAGGI ++ R T S+ R ++ + +V +AR
Sbjct: 244 SIEGIYDTLKECACISKSAGGIALTFEAPTERRTASF-RCCVCSTTRLATWTKVVV-SAR 301
Query: 285 YVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQS 344
V +YLEPWHADIF++LDLRKNHGKEE RARDLFY LW DLFM+RV++
Sbjct: 302 NV-----------RIYLEPWHADIFDWLDLRKNHGKEEARARDLFYGLWTNDLFMKRVEA 350
Query: 345 NGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPY 404
NG W+L CPNE PGL+DCWG EFE LY KYE EGK KK ++AQ LWF IL+SQ+ETG PY
Sbjct: 351 NGEWTLMCPNECPGLSDCWGEEFETLYEKYEAEGKGKKTIKAQQLWFAILESQVETGNPY 410
Query: 405 MLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMES 464
MLFKD CN+KSNQQNLGTIKSSNLCTE+++YTSP ETAVCNLASIALPR+V +E+
Sbjct: 411 MLFKDACNRKSNQQNLGTIKSSNLCTEIVEYTSPDETAVCNLASIALPRFV------IEN 464
Query: 465 HPS---------KLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNL 515
+PS KLVGS SK R+FD KL E+T VT NLN+IIDVNYYPVE A+ SN+
Sbjct: 465 NPSSPTGRTETKKLVGSLKSKERFFDHSKLFEITRKVTRNLNRIIDVNYYPVEAAKNSNM 524
Query: 516 RHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETY 575
RHRPIG+GVQGLAD FILLG+PFDS EAQ+LN +IFETIY+ AL S+ +A EGPY TY
Sbjct: 525 RHRPIGLGVQGLADVFILLGLPFDSPEAQKLNAEIFETIYFAALTESNALAVAEGPYSTY 584
Query: 576 HGSPVSKGILQPDMWGVNP---SDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGN 632
GSPVSKG+LQPDMWG+ +R DW GLR I+++GVRNSLLVAPMPTASTSQILGN
Sbjct: 585 EGSPVSKGVLQPDMWGLTEMPGGNRHDWAGLRASIAQHGVRNSLLVAPMPTASTSQILGN 644
Query: 633 NECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIP 692
NECFEPYTSNIY+RRVLSGEF VVN+HLL DLTE+GLW P +KN++I ++GSVQ + IP
Sbjct: 645 NECFEPYTSNIYARRVLSGEFTVVNQHLLSDLTELGLWDPELKNELISNNGSVQDL-DIP 703
Query: 693 EELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLK 752
+ LK IYKTVWEIKQ+ LVDMA DRG +ID SQS N+HM PN GKLTSLHF+AW +GLK
Sbjct: 704 DNLKNIYKTVWEIKQRVLVDMAADRGAFIDQSQSFNVHMSDPNSGKLTSLHFYAWKKGLK 763
Query: 753 TGMYYLRSRAAADAIKFTVDTS-----VLKENP------KVTDDDDAKM----------A 791
TGMYYLRSRAAADAIKFTVD + V KEN K T D KM A
Sbjct: 764 TGMYYLRSRAAADAIKFTVDATKTKSKVNKENEAPASPRKPTKADLEKMTDEEKEAYLAA 823
Query: 792 QMVCSLTNREECMACGS 808
++ CSL NR++C+ CGS
Sbjct: 824 KLQCSLQNRDDCVMCGS 840
>gi|124003381|ref|ZP_01688231.1| ribonucleoside-diphosphate reductase, alpha subunit [Microscilla
marina ATCC 23134]
gi|123991479|gb|EAY30910.1| ribonucleoside-diphosphate reductase, alpha subunit [Microscilla
marina ATCC 23134]
Length = 808
Score = 1149 bits (2971), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 534/780 (68%), Positives = 650/780 (83%), Gaps = 21/780 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V+KRDG++E+V FDKITAR++KLSY L+ ++ PV V++KV TG+Y GVTT +LD LA
Sbjct: 1 MQVIKRDGRRESVRFDKITARIEKLSYSLARDYVQPVEVAKKVITGIYDGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA M HPDYA LAARI +SNLHK T K FS+T+K++Y + + ++G KA LI+D+
Sbjct: 61 AETAATMAIKHPDYAILAARIAISNLHKTTSKVFSKTMKELYEYIDPKTGEKAGLISDET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+ I KNAA LDS IIYDRD++YDYFGFKTLERSYLLK+ G+VVERPQHMLMRVAVGIH
Sbjct: 121 HAAIQKNAAVLDSSIIYDRDYNYDYFGFKTLERSYLLKMDGQVVERPQHMLMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+D+D ++TY ++S +WFTHA+PTLFNAGTP+ QLSSCFL+ M+DDSIEGIYDTLK+CA
Sbjct: 181 EDVDKVLETYELLSGKWFTHATPTLFNAGTPKPQLSSCFLLTMQDDSIEGIYDTLKQCAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYI+GTNGTSNG++PML+VFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISQSAGGIGLSIHNVRATGSYIKGTNGTSNGVIPMLKVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIFEFLDL+KNHGKEE RARDLFYA+W+ DLFM+RV+++ WSLFCPNEAPGL
Sbjct: 301 LEPWHADIFEFLDLKKNHGKEELRARDLFYAMWLSDLFMKRVENDDTWSLFCPNEAPGLH 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ +G EFE+LY +YE EG+A+KV++AQ+LWF+IL+SQIETGTPYML+KD N+KSNQ+NL
Sbjct: 361 EVYGEEFEKLYEQYELEGRARKVIKAQDLWFKILESQIETGTPYMLYKDAANEKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+++YTS E AVCNLASIALP++V + F
Sbjct: 421 GTIKSSNLCTEIMEYTSKDEVAVCNLASIALPKFVIDGK--------------------F 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D +KL EVT +VT NLN+IID+NYYPV+ A SNLRHRPIGIGVQGLADTF++L MPFDS
Sbjct: 461 DHQKLYEVTQVVTRNLNRIIDINYYPVKEAENSNLRHRPIGIGVQGLADTFMMLRMPFDS 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP-SDRWD 599
EA+ LNKDIFETIY+ ++ S E+A +EG YE+Y GSPVS+GI Q DMWGV P S RWD
Sbjct: 521 EEAKGLNKDIFETIYFASMTASMELAQKEGAYESYKGSPVSEGIFQFDMWGVKPESGRWD 580
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR + K+G RNSLL+APMPTASTSQILGNNECFEPYTSNIY+RRVLSGEFVVVNKH
Sbjct: 581 WQALRKDVKKHGARNSLLLAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFVVVNKH 640
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL+DL E+ LW ++N+I +GSVQ IP+IP+ LK IYKTVWEIKQK +VDMA DRG
Sbjct: 641 LLNDLVELNLWGGDMENRIKAANGSVQNIPEIPQNLKDIYKTVWEIKQKDVVDMAADRGA 700
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN 779
+I SQSLNIHM+ P FGKLTS+HF+AW +GLKTG YYLR++AAA AI+FTV+ +E+
Sbjct: 701 FICQSQSLNIHMENPTFGKLTSMHFYAWKKGLKTGTYYLRTKAAAKAIQFTVEKKYQEES 760
>gi|428184327|gb|EKX53182.1| hypothetical protein GUITHDRAFT_100891 [Guillardia theta CCMP2712]
Length = 806
Score = 1148 bits (2970), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 546/826 (66%), Positives = 649/826 (78%), Gaps = 38/826 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKR+GK E V FDKIT+R+ KLSYGL++ +P++++QK G+Y GV TSQLD LA
Sbjct: 1 MYVVKRNGKMERVQFDKITSRISKLSYGLNLNFVEPLVIAQKCVNGLYSGVKTSQLDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT HPDY+ LAARI VSNLHK TKK FSE + D Y + + SG K+ LIADDV
Sbjct: 61 AETAAYLTTEHPDYSILAARIAVSNLHKQTKKVFSEVMTDCYTYVDPSSGRKSQLIADDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+IIM N +LDS IIYDRD++YDYFGFKTLERSYLLK+ G+V ERPQHMLMRVA+GIHK
Sbjct: 121 YEIIMANKDQLDSAIIYDRDYNYDYFGFKTLERSYLLKLNGQVAERPQHMLMRVAIGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI AI+TY MSQ++FTHASPTLFN+GTP Q+SSCFL+ MKDDSIEGIYDTLK CA
Sbjct: 181 QDIAGAIETYEYMSQKYFTHASPTLFNSGTPHPQMSSCFLLHMKDDSIEGIYDTLKVCAQ 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+SVHNIR+ SYIRGTNGTSNG+VPMLRVFN TARYVDQGGGKR GAFA+Y
Sbjct: 241 ISKSAGGIGLSVHNIRSRNSYIRGTNGTSNGLVPMLRVFNSTARYVDQGGGKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH D+FEFLDLRKN G EE+R RDLF ALW+PDLFMERV+ N W LFCP E PGL+
Sbjct: 301 LEPWHPDVFEFLDLRKNTGTEENRCRDLFLALWIPDLFMERVEKNEDWCLFCPCECPGLS 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG EFE LY KYEKE KA+K V+AQ LWF IL++Q ETGTPY+LFKD CN+KSNQQNL
Sbjct: 361 DTWGEEFESLYLKYEKENKARKTVRAQELWFAILEAQTETGTPYILFKDHCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YTSP E AVCNLASI LP ++++ F
Sbjct: 421 GTIKCSNLCTEIVEYTSPDEVAVCNLASIGLPMFIQD--------------------GQF 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+ +KL EVT ++T NLNKIIDVNYYPVE AR SN+RHRPIGIGVQGLAD F L MPFDS
Sbjct: 461 NHQKLMEVTQVITRNLNKIIDVNYYPVEEARLSNMRHRPIGIGVQGLADVFQKLRMPFDS 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
A+ LN+DI ETIYY A+ S E+A + GPYETY GSP SKGILQ DMWGV PS RW+W
Sbjct: 521 ESAKALNRDIMETIYYGAVTASIELAEKFGPYETYQGSPASKGILQYDMWGVEPSSRWNW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
+++ ++K+G+RNSLL+APMPTASTSQILGNNECFEPYTSNIY+RRV+SGEF VVN HL
Sbjct: 581 AEVKENLAKHGMRNSLLLAPMPTASTSQILGNNECFEPYTSNIYTRRVMSGEFAVVNPHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L +LTE+GLW+ +KN+I+ GSVQ I +IPE+++ IYKTVWE+K ++L+DMA DRG +
Sbjct: 641 LKELTELGLWNKDMKNRILAAQGSVQGISEIPEDVREIYKTVWELKMRSLIDMAADRGAF 700
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL---- 776
ID SQSLN+ + PN KLTS+HF++W +GLKTG YYLR+R AADAI+FTVD S L
Sbjct: 701 IDQSQSLNLFIAAPNPSKLTSMHFYSWKKGLKTGCYYLRTRPAADAIQFTVDKSALQTSN 760
Query: 777 KENPKVTD---------DDDAKMAQ-----MVCSLTNREECMACGS 808
KEN ++ DDD + Q + CSL N++EC+ C S
Sbjct: 761 KENVMPSNTMGQLMKNVDDDIRQTQLAAAKLACSLKNKDECLMCSS 806
>gi|449017740|dbj|BAM81142.1| ribonucleoside-diphosphate reductase alpha chain [Cyanidioschyzon
merolae strain 10D]
Length = 811
Score = 1148 bits (2969), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 541/826 (65%), Positives = 671/826 (81%), Gaps = 39/826 (4%)
Query: 3 VVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVL----VSQKVCTGVYKGVTTSQLDE 58
VVKRDG+++ V FDKITAR+KKL+YGL DP++ V+QKVC GVY GV TS+LDE
Sbjct: 5 VVKRDGRRQPVKFDKITARIKKLAYGL-----DPLVDVTEVAQKVCAGVYDGVHTSELDE 59
Query: 59 LAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIAD 118
LAAETAA M+T H DY+ LAARI VSNLHKNT+KSFS ++ +Y + + ++ APLIA
Sbjct: 60 LAAETAAYMSTRHHDYSILAARIAVSNLHKNTEKSFSAVMERLYAYRSPKTNDPAPLIAS 119
Query: 119 DVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGI 178
DV +I+ ++A +D IIYDRDF YDYFGFKTLERSYLL++ GKVVERPQ MLMRVA+GI
Sbjct: 120 DVIEIVRRHAETIDGAIIYDRDFSYDYFGFKTLERSYLLRIDGKVVERPQQMLMRVAIGI 179
Query: 179 HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKEC 238
HK+D+D+A++TY MSQ++FTHASPTLFNAGTPR QLSSCFL+ M +DSIEGIYDTLK C
Sbjct: 180 HKEDLDAALETYDYMSQKYFTHASPTLFNAGTPRPQLSSCFLLSMTEDSIEGIYDTLKRC 239
Query: 239 AIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA 298
A+ISKSAGGIG+++HNIRAT SYIRGTNG+SNGIVPMLRVFNDTARYVDQGGGKRKGAFA
Sbjct: 240 AVISKSAGGIGLAIHNIRATKSYIRGTNGSSNGIVPMLRVFNDTARYVDQGGGKRKGAFA 299
Query: 299 VYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPG 358
VYLEPWHADIFE+LDL+KNHGKEE RARDLFYALW PDLFM RV++N WSLFCPNEAPG
Sbjct: 300 VYLEPWHADIFEWLDLKKNHGKEEARARDLFYALWTPDLFMRRVEANEQWSLFCPNEAPG 359
Query: 359 LADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQ 418
LAD WG F+ LY +YE EG+A++V+ A+ LWF IL+SQIETGTPYML+KD CN+KSNQQ
Sbjct: 360 LADVWGDAFDELYQRYEAEGRAREVIPARKLWFSILESQIETGTPYMLYKDHCNRKSNQQ 419
Query: 419 NLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNR 478
NLGTI+ SNLCTE+++YT+P E AVCNLASIAL ++V VP + RG+
Sbjct: 420 NLGTIRCSNLCTEIVEYTAPDEVAVCNLASIALNKFV----VPGDRE-------RGTCP- 467
Query: 479 YFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPF 538
F+F++LA VT +VT+NLNKIIDVN+YP+ A+ SNLRHRPIGIGVQGLAD FIL+ MPF
Sbjct: 468 VFNFDELAFVTRMVTKNLNKIIDVNFYPIPEAQNSNLRHRPIGIGVQGLADAFILMRMPF 527
Query: 539 DSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP-SDR 597
+S EA+ LN++IFE IYY+AL+ S E+A R+GPY ++ GSP ++G LQ D+W V P S R
Sbjct: 528 ESDEARALNQEIFECIYYNALQASIELAERDGPYASFEGSPAARGQLQFDLWNVKPTSSR 587
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW L++ I+ +G+RNSLLVAPMPTASTSQILGNNECFEPYTSN+Y+RRVL+GEF VVN
Sbjct: 588 WDWDALKERITLHGLRNSLLVAPMPTASTSQILGNNECFEPYTSNLYTRRVLAGEFTVVN 647
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
+HL+ DL E+GLW+P++KNKII GS+Q+IP+IP++++ +YKTVWE+ Q+ L+D+A DR
Sbjct: 648 QHLVRDLQELGLWNPLVKNKIIAHGGSIQQIPEIPQDIRDLYKTVWEVSQRRLLDLAADR 707
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
G +ID SQSLN+++ QP GKL+S+HFH W GLKTGMYYLR+R AADAIKFT+D +LK
Sbjct: 708 GAFIDQSQSLNVYIAQPTIGKLSSMHFHGWRLGLKTGMYYLRTRPAADAIKFTLDQRILK 767
Query: 778 E---------------NPKVTDDDDAKMAQMVCSLTNREECMACGS 808
E P+ + + + A + CSL +++C+ACGS
Sbjct: 768 EENHTAVNGSQLPCNLTPRTSAAE--QFAALACSLDKKDDCIACGS 811
>gi|301112881|ref|XP_002998211.1| ribonucleoside-diphosphate reductase large subunit [Phytophthora
infestans T30-4]
gi|262112505|gb|EEY70557.1| ribonucleoside-diphosphate reductase large subunit [Phytophthora
infestans T30-4]
Length = 793
Score = 1147 bits (2968), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 534/813 (65%), Positives = 651/813 (80%), Gaps = 25/813 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDG++E V FDKITAR+ KL YGL+ ++ D + +SQKV GVY GVTTS+LDELA
Sbjct: 1 MYVVKRDGRREDVKFDKITARITKLCYGLNPDYVDAIKISQKVVAGVYPGVTTSELDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +T HPD++ LAARI VSNLHKNT K FS+ I+ + + +E++G APLIADDV
Sbjct: 61 AETAAYQSTQHPDFSKLAARIAVSNLHKNTNKVFSDNIEVFHKNAHEKTGAAAPLIADDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+I+M++ L+S II+DRDF+YDYFGFKTLER YL +V GKVVERPQ M++RVA+GIHK
Sbjct: 121 YEIVMQHKDELNSAIIHDRDFEYDYFGFKTLERGYLFRVNGKVVERPQQMILRVALGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI SA++TY +MSQ++FTHA+PTLFNAGTPR QLSSCFL+ M+DDSIEGIYDTLK+CA
Sbjct: 181 SDITSALETYELMSQKFFTHATPTLFNAGTPRPQLSSCFLLAMQDDSIEGIYDTLKQCAC 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+HNIRAT SYIRGTNG+SNGI+PMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 241 ISKWAGGIGISMHNIRATNSYIRGTNGSSNGIIPMLRVFNDTARYVDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+FEFLDLRKNHG E HRARDLFYALWVPDLFM+RV++NG WSLFCPNEAPGL
Sbjct: 301 LEPWHADVFEFLDLRKNHGNELHRARDLFYALWVPDLFMKRVEANGKWSLFCPNEAPGLY 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+CWG EFE LY KYE EG+A+K + AQ LWF IL +QIETG P+ML+KD N+KSNQQNL
Sbjct: 361 ECWGDEFETLYEKYETEGRARKTINAQQLWFAILDAQIETGVPFMLYKDAANRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLC EV++YTSP E AVCNLAS+ALP++V ++ F
Sbjct: 421 GTIRSSNLCCEVMEYTSPDEVAVCNLASVALPKFV--------------------EDAVF 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D+ KL EV ++T NLNK+IDVNYYPV AR+SN+RHRPIGIGVQGLAD FIL+ PF+S
Sbjct: 461 DYRKLYEVVKVITRNLNKVIDVNYYPVAEARKSNMRHRPIGIGVQGLADAFILMNYPFES 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP-SDRWD 599
+AQ+LNK+IFETIY+ A+ TS EIA GPYET+ GSP SKGI Q DMWGV P S W+
Sbjct: 521 PQAQELNKNIFETIYFAAMETSMEIAVELGPYETFQGSPASKGIFQFDMWGVTPQSGLWN 580
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L+D + K+G+RNSLLVAPMPTAST+QILGNNE EPYTSN+Y+RRVL+GEF +VNKH
Sbjct: 581 WAALKDDVIKHGLRNSLLVAPMPTASTAQILGNNESIEPYTSNMYNRRVLAGEFTIVNKH 640
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
L+ +L E+G+W+P ++N+I+ D GSVQKI IPE++K YKTVWEIKQK ++D++ DRG
Sbjct: 641 LMKELIELGIWTPEVRNQILNDGGSVQKIKTIPEDVKEKYKTVWEIKQKAVLDLSADRGA 700
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTS---VL 776
YI SQSLNIH+ P KLTS+HF+AW +GLKTGMYY+R R ADAI+FTVD +
Sbjct: 701 YICQSQSLNIHIADPTISKLTSMHFYAWKKGLKTGMYYMRGRPKADAIQFTVDKQGIDLQ 760
Query: 777 KENPKVTDDDDAKMAQMVCSLTNRE-ECMACGS 808
+ + T A+ V + E EC+ CG+
Sbjct: 761 RAKEEATKTAPTPAAETVTRAGDDEDECLVCGA 793
>gi|320167592|gb|EFW44491.1| ribonucleotide reductase M1 subunit [Capsaspora owczarzaki ATCC
30864]
Length = 785
Score = 1147 bits (2967), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/807 (65%), Positives = 655/807 (81%), Gaps = 25/807 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG+ E V FDKIT+R+ KL YGL+ ++ D V ++QKV GVY GVTT +LD LA
Sbjct: 1 MFVKKRDGRTEKVMFDKITSRVNKLCYGLNSDYVDAVEITQKVINGVYPGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT HPDYA LAARI VSNLHK TKK FS ++D+Y + N ++G APL+ADDV
Sbjct: 61 AETAAYLTTKHPDYAILAARIAVSNLHKETKKQFSSVMRDLYEYQNPKTGKPAPLLADDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+II +NA LDS +IYDRDF Y YFGFKTLERSYLLK+ GK+ ERPQHMLMRVAVGIHK
Sbjct: 121 YEIIQRNADILDSAVIYDRDFSYSYFGFKTLERSYLLKLHGKIAERPQHMLMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
++ID ++TY++MS++WFTHASPTLFN+GTP QLSSCFL+ MKDDSIEGIY+TLK CA+
Sbjct: 181 ENIDLVLETYNLMSEKWFTHASPTLFNSGTPHPQLSSCFLLTMKDDSIEGIYETLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRA+GSYI GTNG SNG+VPMLRVFN TARYVDQGG +R GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHCIRASGSYIAGTNGHSNGLVPMLRVFNTTARYVDQGGNRRPGAFAMY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+F+FL+L+KN GKEE RARDLF+ALW+PDLFM+RV+++G WSL CP+E PGL
Sbjct: 301 LEPWHADVFDFLELKKNTGKEEQRARDLFFALWIPDLFMKRVEADGNWSLMCPHECPGLE 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ +G +FE LYT+YE+EGKA+KV++AQ LWF IL+SQ E+GTPYML+KD CN KSNQ+NL
Sbjct: 361 ETYGDKFEELYTRYEREGKARKVIKAQKLWFAILESQTESGTPYMLYKDACNIKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++Y+SP E AVCNLAS++LP +VR +R +
Sbjct: 421 GTIKCSNLCTEIVEYSSPDEVAVCNLASLSLPMFVR-------------------SDRTY 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL E+T +VT+NLN+IID+NYYPV A +SN+RHRPIG+GVQGLAD FI + +PFDS
Sbjct: 462 DFKKLHEITQVVTKNLNRIIDINYYPVPEAEKSNMRHRPIGLGVQGLADAFIQMRVPFDS 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP-SDRWD 599
+A++LN++IFETIY+ AL S E+A + GPYETY GSPVS+GILQ DMWGV S WD
Sbjct: 522 EDAKKLNREIFETIYHAALTASVEMAKKSGPYETYAGSPVSQGILQHDMWGVKETSGLWD 581
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR I+++G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN+H
Sbjct: 582 WDALRAQIAQHGIRNSLLVAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNQH 641
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LLHDL E+GLW+ +KNKII GS+ I +IP ++A+YKTVWE+ QKTL+DMA DRG
Sbjct: 642 LLHDLMELGLWNDRMKNKIISQGGSIAGIEEIPAHIRALYKTVWELSQKTLIDMAADRGA 701
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN 779
YID SQS N+H+ +PNFGKLTS+HF+AW RGLKTGMYYLR+R AA+AI+FTVD L
Sbjct: 702 YIDQSQSFNVHIAEPNFGKLTSMHFYAWKRGLKTGMYYLRTRPAANAIQFTVDQKALAAP 761
Query: 780 PKVTDDDDAKMAQMVCSLTNREECMAC 806
KV ++ A MVCSL N+E C+ C
Sbjct: 762 QKVDEE-----AAMVCSLQNKEACLMC 783
>gi|326797772|ref|YP_004315591.1| ribonucleoside-diphosphate reductase subunit alpha
[Sphingobacterium sp. 21]
gi|326548536|gb|ADZ76921.1| ribonucleoside-diphosphate reductase, alpha subunit
[Sphingobacterium sp. 21]
Length = 792
Score = 1145 bits (2963), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 540/814 (66%), Positives = 657/814 (80%), Gaps = 28/814 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG+ E+V FDKITAR++KL YGL+ + DP+ V++KV G+Y GVTTS+LD LA
Sbjct: 1 MYVIKRDGRSESVKFDKITARIEKLCYGLNPDLVDPIDVARKVIEGLYDGVTTSELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA++TT HPDYA LA+RI VSNLHKNT KSFSET+ +Y++ + ++G APLIADDV
Sbjct: 61 AETAASLTTKHPDYALLASRIAVSNLHKNTVKSFSETMSLLYHYIDPKTGKPAPLIADDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y++I NA LDS IIYDRDF +DYFGFKTLE+SYLLK+ GK+ ERPQH+ MRVAVGIHK
Sbjct: 121 YEVIQANAMELDSHIIYDRDFSFDYFGFKTLEKSYLLKLNGKIAERPQHLFMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI+S IKTY ++S+RWFTHA+PTLFNAGTP+ Q+SSCFL+ MKDDSIEGIYDTLK+ A
Sbjct: 181 HDIESVIKTYDLLSERWFTHATPTLFNAGTPKPQMSSCFLLTMKDDSIEGIYDTLKQTAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATG+YI GTNGTSNGI+PMLRVFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISQSAGGIGLSIHNVRATGAYISGTNGTSNGIIPMLRVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+++F+DLRKNHGKEE RARDLF ALWVPDLFM+RV+ NG WSLF P+EAPGLA
Sbjct: 301 LEPWHADVYDFIDLRKNHGKEELRARDLFLALWVPDLFMKRVEENGEWSLFSPDEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+C G FE+LY +YE+EG+A+K+V+AQ+LWF IL +QIETGTPY+L+KD N KSNQQNL
Sbjct: 361 ECHGEAFEKLYEQYEREGRARKIVKAQDLWFAILDAQIETGTPYLLYKDAANGKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I+YTS E AVCNLAS+ALPRYV N F
Sbjct: 421 GTIKSSNLCTEIIEYTSADEVAVCNLASLALPRYV--------------------DNGEF 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D +KL ++T VT NLN+IID NYYPV+ AR SNLRHRP+G+GVQGLADTFIL+ MPF+S
Sbjct: 461 DHQKLFDITYQVTINLNRIIDNNYYPVDEARNSNLRHRPVGLGVQGLADTFILMRMPFES 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP-SDRWD 599
A+QLNKDIFETIY+ A+ S ++A +EGPYE++ GSP+S+G Q D+W V P S RWD
Sbjct: 521 EAAKQLNKDIFETIYFAAMTASKDLAVKEGPYESFKGSPLSQGKFQFDLWNVKPDSGRWD 580
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W GLR I K+GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEFV+VNKH
Sbjct: 581 WEGLRKEIKKHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFVIVNKH 640
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL DL E+GLW+ +KN+II +GS+Q I +IP ++K +YKTVWEIK + ++DMA DRG
Sbjct: 641 LLRDLVELGLWNNEMKNRIIAANGSIQDINEIPADIKELYKTVWEIKMRNIIDMAADRGA 700
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE- 778
+I SQSLN+ ++ P KLTS+HF+AW +GLKTGMYYLR++AA A+KFTV+ K
Sbjct: 701 FICQSQSLNLFVNTPTTAKLTSMHFYAWKKGLKTGMYYLRTQAATQAVKFTVENQAGKNM 760
Query: 779 ----NPKVTDDDDAKMAQMVCSLTNREECMACGS 808
K+ D VCS+ E C+ CGS
Sbjct: 761 EPVIPAKIESVPDDIPTGAVCSM--EEGCITCGS 792
>gi|326435406|gb|EGD80976.1| Rrm1 protein [Salpingoeca sp. ATCC 50818]
Length = 779
Score = 1145 bits (2963), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/808 (65%), Positives = 653/808 (80%), Gaps = 29/808 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDG++E V FDKIT+R+ KLSYGL+ EH D V ++++V +GVY GVTT +LD+LA
Sbjct: 1 MYVVKRDGRKEKVLFDKITSRVSKLSYGLNTEHVDAVEITKRVISGVYTGVTTVELDQLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA+ TT HPDYA LAARI VSNLHK T K FS+ I ++++ N +G APLI+ +
Sbjct: 61 AETAASFTTKHPDYAILAARIAVSNLHKMTHKQFSDVIDALHHYVNPETGRPAPLISKET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+ +M N +S II++RDF++++FGFKTLERSYLLK+ GKV ERPQHM MRVA+G+H
Sbjct: 121 YEQVMANKEVYNSHIIFERDFNFNFFGFKTLERSYLLKMNGKVAERPQHMFMRVAIGMHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+D+D+AI+TY+ MS+ +FTHASPTLFN+GTP QLSSCFL+ MKDDSIEGIYDTLK CA+
Sbjct: 181 EDVDAAIETYNYMSEGFFTHASPTLFNSGTPIPQLSSCFLLTMKDDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+SVHNIRA+GSYI GTNG SNG+VPMLRVFN+TARYVDQGG KR GAFAVY
Sbjct: 241 ISKTAGGIGLSVHNIRASGSYIAGTNGHSNGLVPMLRVFNNTARYVDQGGNKRPGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+FL+L+KN G EE RARDLF+ALWVPDLFM+RV++N W+L CP+E PGL+
Sbjct: 301 LEPWHADIFDFLELKKNTGVEEQRARDLFFALWVPDLFMKRVEANEEWTLMCPHECPGLS 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFERLY KYE EGK +K V A LWF IL +Q ETGTPYML+KD CNKKSNQ+NL
Sbjct: 361 DTYGDEFERLYEKYEAEGKGRKKVSASKLWFAILDAQTETGTPYMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI SSNLCTE+I+Y+SP E AVCNL SIAL ++V ++ F
Sbjct: 421 GTIHSSNLCTEIIEYSSPDEVAVCNLGSIALNKFV--------------------GDKTF 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D++KL EVT ++T NLNKIID+NYYPV AR+SN+RHRPIGIGVQGLAD FIL+ +PFDS
Sbjct: 461 DYKKLHEVTKVLTRNLNKIIDINYYPVPEARKSNMRHRPIGIGVQGLADAFILMRLPFDS 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+++N+ IFETIY+ AL S+EIA+ EGPYET+ GSP S+GILQ DMW V P+D WDW
Sbjct: 521 DEAREVNRKIFETIYHGALEASTEIASVEGPYETFEGSPTSEGILQFDMWDVKPTDLWDW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+ + K+G+RNSLLVAPMPTAST+QILGNNE EPYTSNIYSRRVLSGEF VVNKHL
Sbjct: 581 ESLRERVKKDGIRNSLLVAPMPTASTAQILGNNESIEPYTSNIYSRRVLSGEFQVVNKHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL EMGLWS +K++II ++GS+QKI IP+++KA+YKTVWE+ Q+TL+DMA DRG +
Sbjct: 641 LKDLVEMGLWSDEVKDQIILNNGSIQKIEGIPDDIKALYKTVWELSQRTLIDMAADRGAF 700
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQS N+H+ PNFGKLTS+HF+AW RGLKTGMYYLRSRAA +AI+FTVD +E
Sbjct: 701 IDQSQSFNVHISDPNFGKLTSMHFYAWKRGLKTGMYYLRSRAATNAIQFTVDAKKARE-- 758
Query: 781 KVTDDDDAKMAQMVCSLTNREECMACGS 808
AK A M+CS+ NR+EC+ C +
Sbjct: 759 -------AKEAAMMCSIDNRDECVMCSA 779
>gi|443684165|gb|ELT88174.1| hypothetical protein CAPTEDRAFT_228855 [Capitella teleta]
Length = 790
Score = 1145 bits (2962), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/808 (65%), Positives = 657/808 (81%), Gaps = 22/808 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG++EAVHFDKIT+R+ KL Y L+ + DP ++ K G+Y GVTT +LD LA
Sbjct: 1 MFVQKRDGREEAVHFDKITSRISKLCYHLNSDFVDPAQITMKCINGLYPGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK FSE + D+Y + N ++ + +P+I+ ++
Sbjct: 61 AETAATMTVKHPDYAILAARIAVSNLHKETKKVFSEVMNDLYTYVNPKNDIHSPMISKEL 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI+ +NA RL+S IIYDRD+ Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRV+VGIH
Sbjct: 121 LDIVTENADRLNSAIIYDRDYSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D+D AI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DSIEGIYDTLK+CA+
Sbjct: 181 RDLDRAIETYNLLSEKWFTHASPTLFNAGTNRPQMSSCFLLTMAGDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++VH IRATGS+I GTNGTSNG++PMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLNVHCIRATGSFISGTNGTSNGLLPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+F+FLD RKN GKEE RARDLFYALW+PDLFM+RV+ NG WSL CP+E+PGL+
Sbjct: 301 LEPWHADVFDFLDCRKNTGKEEQRARDLFYALWIPDLFMKRVEQNGDWSLMCPHESPGLS 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG EFE LY KYEKEG+ +K ++AQ LW+ I++SQ ETGTPYML+KD+CN+KSNQQNL
Sbjct: 361 DVWGEEFEALYEKYEKEGRVRKTIKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++Y++P E AVCNLASIAL R+V+ ++ F
Sbjct: 421 GTIKCSNLCTEIVEYSAPDEVAVCNLASIALNRFVKS-------------------DKTF 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EVTG++ NLNKIIDVN+YPV AR+SN+RHRPIGIGVQGLADTFIL+ PFDS
Sbjct: 462 DFDKLIEVTGVIVRNLNKIIDVNFYPVPEARKSNMRHRPIGIGVQGLADTFILMRFPFDS 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ+LN+DIFETIYY AL+ S ++A EG Y+TY G PVSKGILQ DMW V +DR DW
Sbjct: 522 PEAQKLNRDIFETIYYGALKMSCQLAQEEGAYQTYAGCPVSKGILQHDMWDVK-ADRHDW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
GLR I K+GVRNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 DGLRADIKKHGVRNSLLMAPMPTASTAQILGNNESTEPYTSNIYTRRVLSGEFQVVNHHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE GLW+ +KN++I +GS+Q+I IP++LKA+YKTVWEIKQK +++MA +RG +
Sbjct: 641 LKDLTENGLWNDDMKNRMISSNGSIQEIEGIPDDLKALYKTVWEIKQKVVLNMAAERGAF 700
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +PN+G+LTS+HF+AW GLKTGMYYLR++ AA AI+FTVD S LK+
Sbjct: 701 IDQSQSLNIHIAEPNYGRLTSMHFYAWKLGLKTGMYYLRTKPAAQAIQFTVDKSKLKKKT 760
Query: 781 KVTDDDDAK--MAQMVCSLTNREECMAC 806
+ ++ MA MVCSL N++EC+ C
Sbjct: 761 PTGESKKSEENMAAMVCSLDNKDECIMC 788
>gi|375148686|ref|YP_005011127.1| ribonucleoside-diphosphate reductase subunit alpha [Niastella
koreensis GR20-10]
gi|361062732|gb|AEW01724.1| ribonucleoside-diphosphate reductase, alpha subunit [Niastella
koreensis GR20-10]
Length = 789
Score = 1144 bits (2959), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/812 (66%), Positives = 656/812 (80%), Gaps = 27/812 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V+KR+GK+E V FDKITAR++KLSYGLS D + V++KV G+Y GVTTS+LD LA
Sbjct: 1 MNVLKRNGKKETVKFDKITARIQKLSYGLS-PLVDVIEVTKKVIEGIYDGVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA++TT HPDYA LA+RI VSNLHKNT+KSFS T+K +Y++ + +G K PL+ADDV
Sbjct: 60 AETAASLTTKHPDYALLASRIAVSNLHKNTEKSFSGTMKRLYDYTDSATGRKMPLLADDV 119
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+II NA LDS IIYDRDF +DYFGFKTLE+SYLL++ G +VERPQHM MRV++GIHK
Sbjct: 120 MEIIEANAELLDSSIIYDRDFGFDYFGFKTLEKSYLLRIDGAIVERPQHMYMRVSIGIHK 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI+SAIKTY++MS+RWFTHA+PTLFN GTP+ Q+SSCFL+ MKDDSI+GIYDTLK+ A
Sbjct: 180 EDIESAIKTYNLMSERWFTHATPTLFNGGTPKPQMSSCFLLTMKDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYI GTNGTSNGI+PMLRVFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIGGTNGTSNGIIPMLRVFNDTARYVDQGGGKRKGAFAIY 299
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADI EFLDLRKNHGKEE RARDLFYALW+ DLFM+RV+SNG WSLFCPNEAPGL
Sbjct: 300 LEPWHADIVEFLDLRKNHGKEEMRARDLFYALWINDLFMKRVESNGDWSLFCPNEAPGLG 359
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LY +YE EG+ +KV++AQ+LWF IL++QIETGTPYML+KD N+KSNQQNL
Sbjct: 360 DTFGEEFEALYNRYEAEGRQRKVIKAQDLWFAILEAQIETGTPYMLYKDAANRKSNQQNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+++YTS E AVCNLAS+ALPR+V E F
Sbjct: 420 GTIKSSNLCTEILEYTSADEVAVCNLASLALPRFVNE--------------------GKF 459
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EVT NLNKIID NYYP+E A+RSNLRHRPIG+GVQGLAD FILL +PF+S
Sbjct: 460 DFDKLFEVTYQAARNLNKIIDNNYYPIEEAKRSNLRHRPIGLGVQGLADVFILLRLPFES 519
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
A+ LNK+IFETIY+ A+ S ++A +G YET+ GSP+SKG Q D+W V PS+R+DW
Sbjct: 520 DLAKMLNKNIFETIYFAAMTASKDMAIEQGAYETFAGSPLSKGQFQFDLWNVEPSNRYDW 579
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR + K+GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVLSGEF++VNKHL
Sbjct: 580 NALRAEVMKHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYVRRVLSGEFIIVNKHL 639
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++GLW+ +KNKII +GS+Q I +IP E+KA+YKTVWEIKQ+ L+DMA DRG +
Sbjct: 640 LKDLVQLGLWNDSMKNKIIAANGSIQNINEIPAEIKALYKTVWEIKQRHLIDMAADRGAF 699
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN- 779
I SQSLN+ +D P KLTS+HF++W GLKTGMYYLR++AA+ A++FTV+ ++
Sbjct: 700 ICQSQSLNLFVDNPTVAKLTSMHFYSWKVGLKTGMYYLRTQAASQAVQFTVEKQGSRQME 759
Query: 780 ---PKVTDDDDAKMAQMVCSLTNREECMACGS 808
PK + +D + VC++ E C+ C S
Sbjct: 760 PVVPKSGESNDEIIEGQVCTM--EEGCVTCSS 789
>gi|431797144|ref|YP_007224048.1| ribonucleoside-diphosphate reductase subunit alpha [Echinicola
vietnamensis DSM 17526]
gi|430787909|gb|AGA78038.1| ribonucleoside-diphosphate reductase, alpha subunit [Echinicola
vietnamensis DSM 17526]
Length = 799
Score = 1144 bits (2958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/818 (65%), Positives = 659/818 (80%), Gaps = 29/818 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V+KRDG++E+V FDKIT R++ L GL + P+ V++KV G+Y GVTTS+LD LA
Sbjct: 1 MLVIKRDGRRESVRFDKITTRIENLCDGLDSRYIQPIEVAKKVIDGLYDGVTTSELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE A+MT HPDYA LAARI +SNLHK T +SFS T+K +Y + N ++G A LIA DV
Sbjct: 61 AEVCASMTVKHPDYAILAARIAISNLHKTTSQSFSNTMKRLYTYVNPKTGDNAALIAPDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y I+ K+AARLD I Y RDF+YD+FGFKTLERSYL+K+ KVVERPQHMLMRVA+GIHK
Sbjct: 121 YGIVKKHAARLDEIIDYSRDFNYDFFGFKTLERSYLIKLDDKVVERPQHMLMRVAIGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+D+D+AI+TYH++S++WFTHA+PTLFNAGTP+ QLSSCFL+ MK+DSI+GIYDTLK+CA
Sbjct: 181 EDLDAAIETYHLLSEKWFTHATPTLFNAGTPKPQLSSCFLLTMKEDSIDGIYDTLKQCAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+H++RA GSYIRGTNG SNGIVPMLR F+ TARYVDQGGGKRKG+FA+Y
Sbjct: 241 ISQSAGGIGLSIHDVRAKGSYIRGTNGVSNGIVPMLRNFDMTARYVDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADI +FL+L+KNHGKEE RARDLFYALW+ DLFM+RV++N WSLFCPNEAPGL+
Sbjct: 301 LEPWHADIKDFLELKKNHGKEELRARDLFYALWISDLFMKRVEANEEWSLFCPNEAPGLS 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+C G EFE+LY KYEKEG+A++ V+AQ LWFE+L+SQIETGTPYML+KD N KSNQ+NL
Sbjct: 361 ECHGEEFEKLYEKYEKEGRARETVKAQELWFEVLESQIETGTPYMLYKDAANGKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+++YTSP E AVCNLASIALP++++ S+G K+ F
Sbjct: 421 GTIKSSNLCTEIMEYTSPDEVAVCNLASIALPKFIK-------------TDSQGKKS--F 465
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D +KL E+T +VT+NLN++ID+NYYPV+ A +SN RHRPIGIGVQGLAD FI+L MPFDS
Sbjct: 466 DHQKLYEITKVVTKNLNRVIDINYYPVKEAEKSNFRHRPIGIGVQGLADAFIMLRMPFDS 525
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP-SDRWD 599
EA LN+DIFETIYY A+ TS E+A G YETY GSPVS+G Q D+WGV P S RW+
Sbjct: 526 AEAAGLNEDIFETIYYAAMETSMELAKVHGTYETYEGSPVSQGQFQFDLWGVTPKSGRWN 585
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L++ ++K GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RR LSGEF+VVNKH
Sbjct: 586 WADLKERVAKFGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRTLSGEFIVVNKH 645
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
L+ DL +GLW+ +KN++I +GSVQ +P++P+ +K +YKTVWEI QK +++MA DRG
Sbjct: 646 LMKDLIRLGLWNDSMKNRLIAANGSVQDMPEVPQNIKDLYKTVWEISQKVVINMAADRGA 705
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK-- 777
YI SQS+N+ M +PNFGKLTS+HF+AW +GLKTGMYYLRS+AA AI+FTVD LK
Sbjct: 706 YICQSQSMNVFMQEPNFGKLTSMHFYAWKKGLKTGMYYLRSKAATSAIQFTVDKESLKNS 765
Query: 778 -------ENPKVTDDDDAKMAQMVCSLTNREECMACGS 808
E P + DA + CSL N ++C CGS
Sbjct: 766 QQATAATEEPNKANSQDA----IACSLDNPDDCEMCGS 799
>gi|71895081|ref|NP_001026008.1| ribonucleoside-diphosphate reductase large subunit [Gallus gallus]
gi|53127690|emb|CAG31174.1| hypothetical protein RCJMB04_2p9 [Gallus gallus]
Length = 790
Score = 1144 bits (2958), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 540/809 (66%), Positives = 655/809 (80%), Gaps = 20/809 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+VVKRDG+QE V FDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVVKRDGRQERVMFDKITSRIQKLCYGLNADFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT HPDYA LAARI VSNLHK TKK FS+ + D+YN+ N +G +P+I+ +
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMDDLYNYINPHNGKHSPMISKET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI++ N RL+S IIYDRDF Y+YFGFKTLERSYLLK+ KV ERPQHMLMRVAVGIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINSKVAERPQHMLMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+AI+TY+++S+RWFTHASPTLFNAGT R +LSSCFL+CMKDDSIEGIYDTLK+CA+
Sbjct: 181 NDIDAAIETYNLLSERWFTHASPTLFNAGTNRPRLSSCFLLCMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV++N WSL CPNE PGL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE+LY YEK+G+ ++VV+AQ LW+ I++SQ ETGTPYML+KD+CN+KSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQGRVRRVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YTS E AVCNLASIAL YV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMYV-------------------TSEHTY 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLAEVT ++ NLNKIID+NYYPV A RSN RHRPIGIGVQGLAD FIL+ PF+S
Sbjct: 462 DFKKLAEVTKVIVRNLNKIIDINYYPVPEAERSNRRHRPIGIGVQGLADAFILMRFPFES 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ+LN+ IFETIYY AL S E+A ++GPYETY GSPVSKGILQ DMW V PSD WDW
Sbjct: 522 PEAQRLNQQIFETIYYGALEASCELAEQQGPYETYEGSPVSKGILQYDMWNVTPSDLWDW 581
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K GVRNSLL++PMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 582 KALKEKIAKYGVRNSLLLSPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQVVNPHL 641
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE GLW+ +KN+II +GS+Q I +IP +LK +YKTVWEI QKT++ MA DRG +
Sbjct: 642 LKDLTERGLWNEEMKNQIIAHNGSIQNISEIPADLKQLYKTVWEISQKTVLKMAADRGAF 701
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR++ AA+ I+FT++ L+E
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTKPAANPIQFTLNKEKLRERE 761
Query: 781 KVTDDDDAK-MAQMVCSLTNREECMACGS 808
K ++++ + A MVCSL NR+ECM CGS
Sbjct: 762 KASEEEKERNKAAMVCSLENRDECMMCGS 790
>gi|373954258|ref|ZP_09614218.1| ribonucleoside-diphosphate reductase, alpha subunit
[Mucilaginibacter paludis DSM 18603]
gi|373890858|gb|EHQ26755.1| ribonucleoside-diphosphate reductase, alpha subunit
[Mucilaginibacter paludis DSM 18603]
Length = 792
Score = 1142 bits (2953), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 541/814 (66%), Positives = 661/814 (81%), Gaps = 28/814 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDGK+E V FDKITAR++KL YGL+ DP+ VS+KV G+Y GVTTS+LD LA
Sbjct: 1 MFVIKRDGKKETVKFDKITARIEKLCYGLNPSLVDPIDVSKKVVEGLYDGVTTSELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA++TT HPDYA LA+RI VSNLHKNT KSFSET++++Y + ++++G A LIADDV
Sbjct: 61 AETAASLTTKHPDYALLASRIAVSNLHKNTIKSFSETMRNLYLYTDKKTGKNASLIADDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+ I NA LDS IIYDRDF +DYFGFKTLE+SYLLK+ GK+ ERPQH+ MRV+VGIHK
Sbjct: 121 WQAIEANAELLDSTIIYDRDFGFDYFGFKTLEKSYLLKIDGKIAERPQHLFMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DIDS IKTY++MS+RWFTHA+PTLFNAGTP+ Q+SSCFL+ M+DDSI+GIYDTLK+ A
Sbjct: 181 EDIDSVIKTYNLMSERWFTHATPTLFNAGTPKPQMSSCFLLTMQDDSIDGIYDTLKQTAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYI GTNGTSNGI+PML+VFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISQSAGGIGLSIHNVRATGSYISGTNGTSNGIIPMLKVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIFEFLDLRKNHGKEE RARDLFYALW+ DLFM+RV+ +G WSLFCP+EAPGL
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEEMRARDLFYALWICDLFMQRVEEDGQWSLFCPHEAPGLH 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+CWG EFE LYTKYE EG+A+K ++AQ LWF IL +Q+ETGTPY+L+KD N KSNQQNL
Sbjct: 361 ECWGKEFEALYTKYEAEGRARKTIRAQELWFAILDAQVETGTPYLLYKDAANSKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I+YTS E AVCNLAS+ALPRY+ GV F
Sbjct: 421 GTIKSSNLCTEIIEYTSADEVAVCNLASLALPRYIT-AGV-------------------F 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D +KL EVT VT NLNKIID NYYPV A SN RHRPIG+GVQGLADTFI L +PF+S
Sbjct: 461 DHQKLYEVTYQVTLNLNKIIDHNYYPVVEASNSNFRHRPIGLGVQGLADTFIRLRLPFES 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP-SDRWD 599
EA++LNK+IFETIY+ A+ S ++A ++GPYET+ GSP+S+G Q D+W V P S RW+
Sbjct: 521 DEAKKLNKEIFETIYFAAMTASKDLAIQDGPYETFKGSPLSQGKFQFDLWNVTPDSGRWN 580
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR + +GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEFVVVNK+
Sbjct: 581 WEDLRSDVMNHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFVVVNKY 640
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LLHDL E+GLW+ +KN+II +GSVQ IP+IP E+K +YKTVWEIK +T++DMA DRG
Sbjct: 641 LLHDLVELGLWNNDMKNQIISANGSVQDIPEIPAEIKELYKTVWEIKMRTIIDMAADRGA 700
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE- 778
Y+ SQSLN+ + PN KLTS+HF+AW +GLKTGMYYLR++AA+ A+KFT+++ K
Sbjct: 701 YVCQSQSLNLFISSPNASKLTSMHFYAWKKGLKTGMYYLRTQAASQAVKFTIESQGGKSM 760
Query: 779 NPKVTDDDDAKMAQM----VCSLTNREECMACGS 808
P + ++ A + ++ VCS+ E C+ C +
Sbjct: 761 EPVIPENGVAVVDEIPDGPVCSM--EEGCVTCSA 792
>gi|409097320|ref|ZP_11217344.1| ribonucleoside-diphosphate reductase subunit alpha [Pedobacter agri
PB92]
Length = 794
Score = 1142 bits (2953), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/814 (66%), Positives = 657/814 (80%), Gaps = 30/814 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG++E V FDKITAR++KL Y L+ + DP+ V++KV G+Y GVTTS+LD LA
Sbjct: 1 MFVLKRDGRKEPVQFDKITARIQKLCYSLNSDLVDPIDVAKKVIEGLYDGVTTSELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA++TT HPDYA LA+RI VSNLHKNT KSFS T+K +Y +++ ++ APLIADDV
Sbjct: 61 AETAASLTTKHPDYALLASRIAVSNLHKNTTKSFSGTMKMLYEYFDPKAQKPAPLIADDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+II KNA LDS IIYDRDF +DYFGFKTLE+SYLLKV G +VERPQH+ MRV+VGIHK
Sbjct: 121 YEIIAKNADILDSSIIYDRDFGFDYFGFKTLEKSYLLKVNGAIVERPQHLFMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI+SAIKTY++MS+RWFTHA+PTLFNA TP+ Q+SSCFL+ M+DDSIEGIYDTLK+ A
Sbjct: 181 EDIESAIKTYNLMSERWFTHATPTLFNAATPKPQMSSCFLLTMQDDSIEGIYDTLKQTAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HNIRATGSYI GTNGTSNGI+PMLRVFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISQSAGGIGLSIHNIRATGSYIGGTNGTSNGIIPMLRVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+FEFLDLRKNHGKEE RARDLFYALW+ DLFM+RV+ NG W+LFCP+EAPGLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEMRARDLFYALWINDLFMQRVKDNGDWTLFCPHEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EFE LYTKYE EG+ +K ++AQ LWF IL SQIETGTPYMLFKD N KSNQQNL
Sbjct: 361 DCFGKEFEDLYTKYEAEGRGRKTIKAQELWFAILDSQIETGTPYMLFKDAANSKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I+YTS E AVCNLAS+ALPR+V N F
Sbjct: 421 GTIKSSNLCTEIIEYTSKDEVAVCNLASLALPRFV--------------------INGQF 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D +KL +VT T NLNKIID NYYPV+ A SN+RHRP+G+GVQGLAD FILL +PF+S
Sbjct: 461 DHQKLYDVTYQATLNLNKIIDHNYYPVQEAENSNMRHRPVGLGVQGLADAFILLRLPFES 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP-SDRWD 599
EA++LNKDIFETIY+ ++ S+++A + GPY+T+ GSP+SKG Q D+W V P S RWD
Sbjct: 521 DEAKRLNKDIFETIYFASMTASNDLAVKNGPYQTFEGSPLSKGQFQFDLWNVTPDSGRWD 580
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR + K+GV NSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEFVVVNKH
Sbjct: 581 WEALRKKVVKDGVYNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFVVVNKH 640
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL DL +GLW+ +KN+II +GS+Q IP IP+ +K +YKTVWEIK + ++DMA DRG
Sbjct: 641 LLKDLVALGLWNNDMKNQIILANGSIQAIPSIPDYIKELYKTVWEIKMRNIIDMAADRGA 700
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE- 778
YI SQSLN+ ++ PN KLTS+HF+AW +GLKTGMYYLR++AA+ A+KFTV+ K
Sbjct: 701 YICQSQSLNLFVNAPNTSKLTSMHFYAWEKGLKTGMYYLRTQAASQAVKFTVENQGGKAI 760
Query: 779 ----NPKVTDDDDAK--MAQMVCSLTNREECMAC 806
++T D A+ + VCS+ E C++C
Sbjct: 761 EAVIPAQMTQDQVAEEIVDGPVCSM--EEGCISC 792
>gi|410909836|ref|XP_003968396.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Takifugu rubripes]
Length = 794
Score = 1140 bits (2950), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/813 (65%), Positives = 652/813 (80%), Gaps = 24/813 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+VVKRDG+QE V FDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVVKRDGRQERVMFDKITSRIQKLCYGLNADFVDPAQITMKVIQGLYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE +A +TT HPDYA LAARI VSNLHK TKK FS+ ++D+YN+ N + +P+++ +
Sbjct: 61 AEISATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPLNKRHSPMVSKET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI+++N RL+S IIYDRDF Y++FGFKTLERSYLLK+ GKV ERPQHMLMRV+VGIH+
Sbjct: 121 LDIVLQNKDRLNSAIIYDRDFSYNFFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DID+AI+TY+++S++WFTHASPTLFNAGT R QLSSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 TDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLAMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IR+TGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRSTGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAMY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DIF+FL+L+KN GKEE RARDLFY +W+PDLFM+RV+SN WSL CP+E PGL
Sbjct: 301 LEPWHSDIFDFLELKKNTGKEEQRARDLFYGMWIPDLFMKRVESNQDWSLMCPDECPGLN 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+CWG EFE+LYTKYEKEG+ K+VV+AQ +W I++SQ ETGTPYML+KD CN+KSNQQNL
Sbjct: 361 ECWGEEFEKLYTKYEKEGRVKRVVKAQQVWHAIIESQTETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+++YTS E AVCNLAS+AL YV + R F
Sbjct: 421 GTIKSSNLCTEIVEYTSSDEVAVCNLASVALNMYV-------------------TAERTF 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLA VT +V +NLNKIID+NYYPV A +SN RHRPIGIGVQGLAD FIL+ PF+S
Sbjct: 462 DFQKLAAVTKVVVKNLNKIIDINYYPVPEAEKSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LN IFETIYY AL S E+AA GPYETY GSPVSKGILQ DMW P+D DW
Sbjct: 522 PEAQLLNTQIFETIYYAALEASCELAAELGPYETYEGSPVSKGILQYDMWEKTPTDLLDW 581
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K+GVRNSLL+APMPTAST+QILGNNE E YTSNIY+RRVLSGEF +VN HL
Sbjct: 582 KLLKEKIAKHGVRNSLLLAPMPTASTAQILGNNESIEAYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE GLW+ +KNK+I +GS+Q I IP ++K +YKTVWEI QKT++ MA DRG +
Sbjct: 642 LKDLTERGLWNEDMKNKLIAHNGSIQNINGIPNDVKQLYKTVWEISQKTIIKMAADRGAF 701
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE-- 778
ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR++ AA+ I+FT++ LKE
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTKPAANPIQFTLNKEKLKETQ 761
Query: 779 NPKVTDDDDAK---MAQMVCSLTNREECMACGS 808
+P +++ K MA MVCSL NR+EC+ CGS
Sbjct: 762 DPVKASEEEVKERNMAAMVCSLQNRDECLMCGS 794
>gi|375013327|ref|YP_004990315.1| ribonucleoside-diphosphate reductase subunit alpha [Owenweeksia
hongkongensis DSM 17368]
gi|359349251|gb|AEV33670.1| ribonucleoside-diphosphate reductase, alpha subunit [Owenweeksia
hongkongensis DSM 17368]
Length = 821
Score = 1140 bits (2948), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 544/842 (64%), Positives = 661/842 (78%), Gaps = 55/842 (6%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG++E++ FDKITAR++KL YGLS E DP V+ KV G+Y+GVTTS+LD LA
Sbjct: 1 MYVLKRDGRKESIKFDKITARIQKLCYGLS-ELVDPTTVAMKVIEGIYEGVTTSELDSLA 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE +A+MTT HPDYA LAARI VSNLHKNT KSFSET+KD+ + N ++GL +PLIADDV
Sbjct: 60 AEVSASMTTRHPDYAQLAARIAVSNLHKNTTKSFSETMKDLKEYVNPKTGLHSPLIADDV 119
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+II KNAA LDS +IYDRDF YDYFGFKTLERSYLL+V G++ ERPQHMLMRVA+GIHK
Sbjct: 120 YEIIEKNAAHLDSTLIYDRDFGYDYFGFKTLERSYLLRVNGQIAERPQHMLMRVAIGIHK 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+D+++A++TY +MS+++FTHA+PTLFNAGTP+ Q+SSCFL+ MKDDSI+GIYDTLK+C+
Sbjct: 180 EDLEAAVETYDLMSKKYFTHATPTLFNAGTPKPQMSSCFLLTMKDDSIDGIYDTLKQCSK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+FLDL+KNHGKEE RARDLFYALW PDLFM+RV+ G W+L PNE PGL
Sbjct: 300 LEPWHADIFDFLDLKKNHGKEEMRARDLFYALWTPDLFMKRVKEGGDWTLMDPNECPGLC 359
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G +FE LYTKYE+EGK +K V+A++LW +I +SQIETGTPYML+KD N+KSNQ+NL
Sbjct: 360 DVYGEKFEELYTKYEQEGKGRKTVKARDLWGKITESQIETGTPYMLYKDAANEKSNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++YT+P E AVCNLASIALP Y+ E F
Sbjct: 420 GTIRSSNLCTEIMEYTAPDEVAVCNLASIALPMYIEEGK--------------------F 459
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D +KL +VT VT+NLN+IID NYYPV AR SN+RHRP+G+GVQGLADTFI L + F S
Sbjct: 460 DHQKLYDVTYKVTKNLNRIIDRNYYPVAEARNSNMRHRPVGLGVQGLADTFIKLRLSFTS 519
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSD---R 597
EA+QLNKDIFETIYY AL S + A ++G YET+ GSP+SKG Q +MWG++ D
Sbjct: 520 DEAKQLNKDIFETIYYAALCASKDEAIQDGAYETFEGSPISKGEFQFNMWGISEDDLSGN 579
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + + GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWKALRKEVMEKGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
KHLL DL ++GLWS +KN II +GS+Q I IP+ LK IYKTVWE+ K ++DM+ DR
Sbjct: 640 KHLLIDLVDLGLWSEDLKNDIIRANGSIQNIDIIPDNLKEIYKTVWEMSMKDIIDMSADR 699
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
G +ID SQSLN+ M+ N GKLTS+HF+AW +GLKTGMYYLR++AA+DAIKFTV
Sbjct: 700 GWFIDQSQSLNLFMENANIGKLTSMHFYAWEKGLKTGMYYLRTKAASDAIKFTVQKQSKA 759
Query: 778 ENPKVTDDDD---------------------AKMAQMV----------CSLTNREECMAC 806
E VTD A+MA+ V CS+ N ++C AC
Sbjct: 760 EVTPVTDSKQTEKIQEKESVQKANSLGEKRVAEMAERVNNFSDEEVIACSIDNPDDCEAC 819
Query: 807 GS 808
GS
Sbjct: 820 GS 821
>gi|72084113|ref|XP_780425.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
isoform 1 [Strongylocentrotus purpuratus]
Length = 797
Score = 1139 bits (2947), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 540/813 (66%), Positives = 663/813 (81%), Gaps = 26/813 (3%)
Query: 2 YVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAA 61
YV KRDG++E V FDKIT+R+++L Y L+ + DP +++ KV +GVY GVTT +LD LAA
Sbjct: 5 YVQKRDGRKEIVMFDKITSRIQRLCYNLNSDFIDPAVITMKVISGVYPGVTTVELDTLAA 64
Query: 62 ETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVY 121
ETAA MTT HPDYA LAARI VSNLHK TKK FS +KD++ + N R+GL +PLI+++
Sbjct: 65 ETAATMTTKHPDYAVLAARIAVSNLHKETKKLFSAVMKDLFEYTNPRNGLHSPLISEETM 124
Query: 122 DIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKD 181
II NA RL+S ++YDRDF+Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRV+VGIH
Sbjct: 125 MIINDNADRLNSAVLYDRDFEYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHGK 184
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAII 241
DID+AI+TY+++S RWFTHASPTLFNAGT R QLSSCFL+ MKDDSI+GIY+TLK CA+I
Sbjct: 185 DIDAAIQTYNLLSDRWFTHASPTLFNAGTNRPQLSSCFLLTMKDDSIDGIYETLKNCALI 244
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SK+AGGIG+++HNIRA+GSYI GTNG SNG++PMLRV+N+TARYVDQGG KR GAFA+YL
Sbjct: 245 SKTAGGIGLNIHNIRASGSYIAGTNGNSNGLLPMLRVYNNTARYVDQGGNKRPGAFAIYL 304
Query: 302 EPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLAD 361
EPWHADIF+FLD +KNHGKEE RARDLFY LW+PDLFM+RV+++G W+L CP+E+PGL +
Sbjct: 305 EPWHADIFDFLDCKKNHGKEEQRARDLFYGLWIPDLFMKRVEADGDWTLMCPHESPGLHE 364
Query: 362 CWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG 421
WG EFE LY YEK G+ +K ++AQ LW+ I++SQ ETGTPYM++KD CNKKSNQQNLG
Sbjct: 365 VWGEEFETLYEGYEKAGRGRKTIKAQALWYAIIESQTETGTPYMVYKDHCNKKSNQQNLG 424
Query: 422 TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFD 481
TIK SNLCTE+++Y+S E AVCNLASIALPR+V++ R FD
Sbjct: 425 TIKCSNLCTEIVEYSSADEVAVCNLASIALPRFVQD--------------------RTFD 464
Query: 482 FEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDST 541
F+KL EVT ++TENLNKIID+NYYPV A+RSN RHRPIGIGVQGLAD FIL+ PF+S
Sbjct: 465 FKKLEEVTMVITENLNKIIDINYYPVPEAKRSNFRHRPIGIGVQGLADAFILMRFPFESV 524
Query: 542 EAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWG 601
EA++LN IFETIYY AL+ S +IAA+ GPYETY GSPVSKGILQ DMWGV P+D DW
Sbjct: 525 EAKKLNIQIFETIYYAALKASCKIAAKLGPYETYKGSPVSKGILQQDMWGVTPTDLHDWA 584
Query: 602 GLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
L+ I+K+GVRNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HLL
Sbjct: 585 SLKADIAKHGVRNSLLLAPMPTASTAQILGNNEAIEPYTSNIYTRRVLSGEFQVVNHHLL 644
Query: 662 HDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYI 721
DLT+MGLWS +KN +I ++GS+Q IP IP+++KA+YKTVWEI QKT++ MAVDRG YI
Sbjct: 645 RDLTDMGLWSDEMKNNLIANNGSIQNIPTIPDDIKALYKTVWEISQKTIIQMAVDRGAYI 704
Query: 722 DHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE--N 779
D SQSLNIH+ +PN+GKLTS+HF AW GLKTGMYYLR+R AAD IKFT+D LKE
Sbjct: 705 DQSQSLNIHIAEPNYGKLTSMHFFAWKSGLKTGMYYLRTRPAADPIKFTLDKLSLKEKSG 764
Query: 780 PKVTDDDDAKMAQ----MVCSLTNREECMACGS 808
K+T+ ++ + A+ M+CSL N++ C++CGS
Sbjct: 765 AKLTEAEEKERAKNEAAMMCSLENKDACVSCGS 797
>gi|260789736|ref|XP_002589901.1| hypothetical protein BRAFLDRAFT_266176 [Branchiostoma floridae]
gi|229275086|gb|EEN45912.1| hypothetical protein BRAFLDRAFT_266176 [Branchiostoma floridae]
Length = 787
Score = 1139 bits (2945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/808 (64%), Positives = 646/808 (79%), Gaps = 21/808 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG+QE VHFDKIT+R++KL YGL+++ DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MYVLKRDGRQEKVHFDKITSRIQKLCYGLNMDFVDPTKITMKVINGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA+LAARI +SNLHK TKK+F++ ++D+YN N ++ +P+I+ +
Sbjct: 61 AETAATMTVKHPDYATLAARIAISNLHKETKKAFTDVMEDLYNWVNPKTNQHSPMISKKL 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
D++ KNA RL+S IIYDRDF Y YFG KTLERSYLL++ GKV ERPQHMLMRVA+GIH
Sbjct: 121 MDLVTKNADRLNSAIIYDRDFKYTYFGIKTLERSYLLRIDGKVAERPQHMLMRVALGIHY 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+D+D+AI+TY++MS++ FTHASPTLFNAGT + QLSSCFL+ MKDDSI+GIY+TLK+CA+
Sbjct: 181 EDLDAAIETYNLMSEKKFTHASPTLFNAGTNKPQLSSCFLLTMKDDSIDGIYETLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV++H IRA+GS+I GTNGTSNG++PMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVNIHKIRASGSFIAGTNGTSNGLLPMLRVFNNTARYVDQGGNKRPGAFAMY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIFEFLD RKN GKEE RARDLFYA+W+PDLFM+RV+ NG W+L CP+E PGL
Sbjct: 301 LEPWHADIFEFLDARKNTGKEEQRARDLFYAMWIPDLFMKRVEENGEWTLMCPHECPGLE 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DCWG EFE+LY YEK GK ++ V+AQ +W+ I+++Q ETG PYML+KD CN KSNQQNL
Sbjct: 361 DCWGEEFEKLYEGYEKAGKGRRTVKAQQVWYAIIEAQTETGNPYMLYKDACNSKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YTSP E AVCNLASIA+ YV+ G +
Sbjct: 421 GTIKCSNLCTEIVEYTSPDEVAVCNLASIAVNMYVKPDGT-------------------Y 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DFEKL EVT ++T NLNKIIDVNYYPV A SN +HRPIGIGVQGLAD FIL+ PF+S
Sbjct: 462 DFEKLKEVTVVITRNLNKIIDVNYYPVPEAENSNKKHRPIGIGVQGLADCFILMRYPFES 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY A++ S EIA GPYETY G PVSKGI Q DMW V P+D WDW
Sbjct: 522 EEAQHLNKQIFETIYYGAMQASCEIAKELGPYETYEGCPVSKGIFQYDMWNVTPTDLWDW 581
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ + ++GVRNSLL+APMPTAST+QILGNNE E YTSNIY+RRVLSGEF VVN HL
Sbjct: 582 AALKEQVKQHGVRNSLLLAPMPTASTAQILGNNESIEAYTSNIYTRRVLSGEFQVVNHHL 641
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
+ DLTE+GLW+ +KN II ++GSVQ I IPE ++ +YKT WEI QKT++ MA DRG +
Sbjct: 642 MTDLTELGLWNEEMKNMIIANNGSVQNIEVIPETIRNLYKTTWEISQKTVIKMAADRGAF 701
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +PN+GK+TS+HF+ W GLKTGMYYLR+R A++ I+FTVD S L ++
Sbjct: 702 IDQSQSLNIHIGEPNYGKITSMHFYGWKLGLKTGMYYLRTRPASNPIQFTVDKSKLAQST 761
Query: 781 KVTDDDDAKMAQMVCSLTNREECMACGS 808
K + + ++ MVCSL N++EC+ CGS
Sbjct: 762 KA--EKEKQLEAMVCSLENKDECLMCGS 787
>gi|196012349|ref|XP_002116037.1| hypothetical protein TRIADDRAFT_50804 [Trichoplax adhaerens]
gi|190581360|gb|EDV21437.1| hypothetical protein TRIADDRAFT_50804 [Trichoplax adhaerens]
Length = 780
Score = 1139 bits (2945), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/806 (65%), Positives = 651/806 (80%), Gaps = 28/806 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDG++E V FDKIT+R+ KL Y L+ +H DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MYVVKRDGRKEKVMFDKITSRVSKLCYNLNNDHVDPAAITMKVIAGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA+MTTNHPDYA LAARI VSNLHK TKK+FS + ++YN+ N ++G +P+I+ +
Sbjct: 61 AEIAASMTTNHPDYALLAARIAVSNLHKETKKTFSVVMDELYNYVNPKNGKHSPMISKET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
++II K+ RL+S IIYDRD++Y++FGFKTLERSYLLK+ KV ERPQHMLMRV+VGIH
Sbjct: 121 HEIITKHCERLNSAIIYDRDYNYNFFGFKTLERSYLLKIDKKVAERPQHMLMRVSVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID AI+TY++MS+RWFTHASPTLFNAGT R QLSSCFL+ M DDSIEGIYDTLK+CA+
Sbjct: 181 EDIDGAIETYNLMSERWFTHASPTLFNAGTCRPQLSSCFLLTMSDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+SVH IR++GSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLSVHCIRSSGSYIAGTNGHSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIF+FLDL+KN GKEE RARDLFYA+W+PDLFM+RV+ NG+WSL CPN+ PGL
Sbjct: 301 LEPWHPDIFDFLDLKKNTGKEEQRARDLFYAMWMPDLFMKRVEENGVWSLMCPNDCPGLH 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE+LYT+YE GK + V+AQ LWF IL++Q+ETGTPYML+KD CN+KSNQ+NL
Sbjct: 361 DTYGEEFEKLYTEYEDAGKFIRQVRAQKLWFAILEAQVETGTPYMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I+YTSP E AVCNLASIALPR+VR ++ F
Sbjct: 421 GTIKSSNLCTEIIEYTSPDEVAVCNLASIALPRFVR-------------------PDKTF 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KLAEVT ++T NLNKIID+N+YPV A +SN RHRPIGIGVQGLAD FIL+ PFD
Sbjct: 462 DFHKLAEVTKVITRNLNKIIDINFYPVPEAEKSNKRHRPIGIGVQGLADAFILMRFPFDG 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+ LN IFE+IYY AL+ S E+A GPYETY GSP S+G LQ D+W P+D W+W
Sbjct: 522 PEARDLNIKIFESIYYGALQASCELAKEVGPYETYEGSPASQGQLQFDLWEKQPTDLWNW 581
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I K G+RNSLL+APMPTAST+QILGNNE EPYTSNIYSRRVLSGEF VVN+HL
Sbjct: 582 NSLKEDIKKYGLRNSLLLAPMPTASTAQILGNNESIEPYTSNIYSRRVLSGEFQVVNQHL 641
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLT+MG+W+ ++KN++I ++GS+QKI IP+++KA+YKTVWEI Q+TL+DMA DRG Y
Sbjct: 642 LKDLTDMGVWNDMMKNELIANNGSIQKINNIPDDIKALYKTVWEISQRTLIDMAADRGAY 701
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQS N+H+ +PNF KLTS+HF+AW +GLKTGMYYLR++ AA AI+FTVD L+++
Sbjct: 702 IDQSQSFNVHIAEPNFAKLTSMHFYAWKKGLKTGMYYLRTKPAASAIQFTVDKEKLQKD- 760
Query: 781 KVTDDDDAKMAQMVCSLTNREECMAC 806
+ + MVCSL N+E C+ C
Sbjct: 761 --------RESAMVCSLENKEACLMC 778
>gi|327403796|ref|YP_004344634.1| ribonucleoside-diphosphate reductase subunit alpha [Fluviicola
taffensis DSM 16823]
gi|327319304|gb|AEA43796.1| ribonucleoside-diphosphate reductase, alpha subunit [Fluviicola
taffensis DSM 16823]
Length = 789
Score = 1138 bits (2944), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 529/807 (65%), Positives = 651/807 (80%), Gaps = 21/807 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG++EAV FDKITAR+ K+ YGL P V+ KV G+Y GVTT+ LD LA
Sbjct: 1 MYVLKRDGRKEAVKFDKITARIIKMCYGLD-PLVSPEAVAMKVIEGIYDGVTTTVLDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AAA T +HPDYA LA+RI VSNLHK TKKSFSE ++D+Y + + ++G +A LIADDV
Sbjct: 60 AEVAAAKTIDHPDYALLASRIAVSNLHKETKKSFSEVMEDLYKYVDPKTGQRASLIADDV 119
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y++I N+ LDS IIYDRDF YDYFGFKTL RSYLL+ +G++ ERPQ MLMRVAVGIHK
Sbjct: 120 YEVIQNNSELLDSSIIYDRDFRYDYFGFKTLTRSYLLRTKGEIAERPQQMLMRVAVGIHK 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+D+ AIKTY++MS+ WFTHA+PTLFNAGTP+ Q+SSCFL+ MKDDSIEGIY+TLK CA
Sbjct: 180 NDLPQAIKTYNLMSEGWFTHATPTLFNAGTPKPQMSSCFLLTMKDDSIEGIYETLKSCAQ 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+++HNIRATGSYI+GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLAIHNIRATGSYIKGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAMY 299
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWHAD+F+FLDL+KN GKEE RARDLF+ALW+PDLFM+RV+ NG W+L CP+E PGL+
Sbjct: 300 IEPWHADVFDFLDLKKNTGKEEMRARDLFFALWIPDLFMKRVEENGDWTLMCPHECPGLS 359
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LYT+YE EGK +K ++AQ+LWF++L+SQIETGTPYML+KD N KSNQQNL
Sbjct: 360 DTFGAEFEALYTQYETEGKGRKTIKAQDLWFKVLESQIETGTPYMLYKDAANAKSNQQNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G IKSSNLCTE+I+YT+P E AVCNLAS+ALP+YV E G F
Sbjct: 420 GVIKSSNLCTEIIEYTAPDEIAVCNLASLALPKYVTEDG-------------------KF 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D +KL EVT T NLN+IID N+YPVE AR+SN+RHRPIG+GVQGLADTFI+L PF+S
Sbjct: 461 DHDKLFEVTYQATVNLNRIIDGNFYPVEEARKSNMRHRPIGLGVQGLADTFIMLRYPFES 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+ LN++IFETIYY A+ S ++A EGPYETY GSPVSKG+ Q DMWGV P+ RW+W
Sbjct: 521 EEARALNREIFETIYYAAMTASKDLAMAEGPYETYAGSPVSKGVFQYDMWGVTPTSRWEW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ ++K GVRNSLLVAPMPTAST+QILGNNECFEPYTSNIY+RRVLSGEF++VNKHL
Sbjct: 581 DLLKEEVAKYGVRNSLLVAPMPTASTAQILGNNECFEPYTSNIYTRRVLSGEFIIVNKHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL + GLW+ ++ K++ +GSVQ I +IP+ +K +YKT WEI QK +++ A DRG Y
Sbjct: 641 LKDLVKEGLWTKDMRQKLMAANGSVQNINEIPQYIKDLYKTAWEISQKAIIEQAADRGAY 700
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
I SQSLNI M+ NFGKLTS+HF+ W +GLKTGMYYLR++AA DAIKFTVD +V +E
Sbjct: 701 ICQSQSLNIFMENANFGKLTSMHFYGWKKGLKTGMYYLRTKAATDAIKFTVDKAVTEEPA 760
Query: 781 KVTDDD-DAKMAQMVCSLTNREECMAC 806
++ + + + A + CSL N + C C
Sbjct: 761 AISAAELEEQQAAIACSLDNPDNCEMC 787
>gi|432890244|ref|XP_004075435.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Oryzias latipes]
Length = 794
Score = 1138 bits (2943), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 534/812 (65%), Positives = 651/812 (80%), Gaps = 23/812 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG+QE V FDKIT+R++KL YGL+ E DP ++ KV G+Y GVTT +LD LA
Sbjct: 2 MYVIKRDGRQERVMFDKITSRIQKLCYGLNSEFVDPAQITMKVIQGLYSGVTTVELDTLA 61
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA +TT +PDYA LAARI VSNLHK TKK FSE ++D+Y++ N + +P+I+ +
Sbjct: 62 AEIAATLTTKYPDYAILAARIAVSNLHKETKKVFSEVMEDLYSYVNPLNKCHSPMISKET 121
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI+++N RL+S II+DRDF Y++FGFKTLERSYLLK+ GKV ERPQHMLMRVAVGIH
Sbjct: 122 LDIVLENKDRLNSAIIFDRDFSYNFFGFKTLERSYLLKINGKVAERPQHMLMRVAVGIHG 181
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+ID+AI+TY+++S++WFTHASPTLFNAGT R QLSSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 182 RNIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLAMKDDSIEGIYDTLKQCAL 241
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IR+TGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 242 ISKSAGGIGVAVSCIRSTGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAMY 301
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH D+F+FL+L+KN GKEE RARDLFYALW+PDLFM+RV+SN WSL CPNE PGL
Sbjct: 302 LEPWHFDVFDFLELKKNTGKEEQRARDLFYALWIPDLFMKRVESNQDWSLMCPNECPGLD 361
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+CWG EFE LYTKYE+EG+ K+VV+AQ LW +++SQ ETGTPYML+KD CNKKSNQQNL
Sbjct: 362 ECWGVEFEELYTKYEREGRVKRVVKAQQLWHAVIESQTETGTPYMLYKDACNKKSNQQNL 421
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YTS E AVCNLASIAL YV + R F
Sbjct: 422 GTIKCSNLCTEIVEYTSHDEVAVCNLASIALNMYV-------------------TPERTF 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLA VT ++ +NLNKIID+NYYPV A +SN RHRPIGIGVQGLAD FIL+ PF+S
Sbjct: 463 DFKKLASVTKVIVKNLNKIIDINYYPVPEAEKSNKRHRPIGIGVQGLADAFILMRYPFES 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LN IFETIYY AL S E+AA GPYETY G PVS+G+LQ DMW P+D WDW
Sbjct: 523 PEAQLLNIQIFETIYYAALEASCELAAELGPYETYDGCPVSRGVLQYDMWEKTPTDLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K+GVRNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 583 KLLKEKIAKHGVRNSLLLAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE GLWS +KNK+I ++GS+Q I +IP +LK +YKTVWEI QKT++ MA DRG +
Sbjct: 643 LKDLTERGLWSEEMKNKLIGNNGSIQDIAEIPNDLKQLYKTVWEISQKTVLKMAADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE-- 778
ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR++ AA+ I+FT++ LKE
Sbjct: 703 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTKPAANPIQFTLNKEKLKEGQ 762
Query: 779 NPKVTDDD--DAKMAQMVCSLTNREECMACGS 808
+ K+ + D + A MVCSL NR++C+ CGS
Sbjct: 763 SSKMPEQDAKERNTAAMVCSLENRDDCLMCGS 794
>gi|395521330|ref|XP_003764771.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
[Sarcophilus harrisii]
Length = 911
Score = 1137 bits (2942), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/804 (66%), Positives = 648/804 (80%), Gaps = 21/804 (2%)
Query: 7 DGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAA 66
DG+QE V FDKIT+R++KL YGL++E DP ++ KV G+Y GVTT +LD LAAET+A
Sbjct: 127 DGRQERVMFDKITSRIQKLCYGLNMEFVDPAQITMKVIQGLYSGVTTVELDTLAAETSAT 186
Query: 67 MTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMK 126
+TT HPDYA LAARI VSNLHK TKK FS+ ++D+YN+ N +G +P++A DI++
Sbjct: 187 LTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPFNGRHSPMVAKSTLDIVLA 246
Query: 127 NAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSA 186
N RL+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRV+VGIHK+DID+A
Sbjct: 247 NKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHKEDIDAA 306
Query: 187 IKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAG 246
I+TY+++S+RWFTHASPTLFNAGT R QLSSCFL+ MKDDSIEGIYDTLK+CA+ISKSAG
Sbjct: 307 IETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCALISKSAG 366
Query: 247 GIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHA 306
GIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+YLEPWH
Sbjct: 367 GIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIYLEPWHL 426
Query: 307 DIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTE 366
DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV++N WSL CPNE PGL D WG E
Sbjct: 427 DIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVENNQDWSLMCPNECPGLDDVWGEE 486
Query: 367 FERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSS 426
FE+LY YEK+G+ +KVV+AQ LW+ I++SQ ETGTPYML+KD+CN+KSNQQNLGTIK S
Sbjct: 487 FEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNLGTIKCS 546
Query: 427 NLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLA 486
NLCTE+++YTS E AVCNLAS+AL +V + FDF+KLA
Sbjct: 547 NLCTEIVEYTSKDEVAVCNLASLALNMFV-------------------TLEHTFDFQKLA 587
Query: 487 EVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQL 546
EVT ++ NLNKII++NYYPV A SN RHRPIGIGVQGLAD FIL+ PF+S EAQ L
Sbjct: 588 EVTKVIVRNLNKIININYYPVPEASLSNKRHRPIGIGVQGLADAFILMRYPFESPEAQLL 647
Query: 547 NKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDM 606
NK IFETIYY AL S ++A GPYETY GSPVSKGILQ DMW V P+D WDW L++
Sbjct: 648 NKQIFETIYYGALEASCDLAKEYGPYETYEGSPVSKGILQYDMWNVTPTDLWDWNVLKEK 707
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HLL DLTE
Sbjct: 708 IAKYGIRNSLLLAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHLLKDLTE 767
Query: 667 MGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQS 726
GLW+ +KN+II +GS+Q IP+IPE+LK +YKTVWEI QKT++ MA DRG +ID SQS
Sbjct: 768 RGLWNEEMKNQIIACNGSIQSIPEIPEDLKQLYKTVWEISQKTVLKMAADRGAFIDQSQS 827
Query: 727 LNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDD 786
LNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR+R AA+ I+FT++ LKE KV D+
Sbjct: 828 LNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKEKEKVLKDE 887
Query: 787 DAK--MAQMVCSLTNREECMACGS 808
+ + A MVCSL NR+EC+ CGS
Sbjct: 888 EKERNTAAMVCSLENRDECLMCGS 911
>gi|395217261|ref|ZP_10401556.1| ribonucleoside diphosphate reductase subunit alpha [Pontibacter sp.
BAB1700]
gi|394455058|gb|EJF09608.1| ribonucleoside diphosphate reductase subunit alpha [Pontibacter sp.
BAB1700]
Length = 763
Score = 1137 bits (2942), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/779 (67%), Positives = 642/779 (82%), Gaps = 17/779 (2%)
Query: 31 IEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNT 90
+++ P+ V++KV G+Y GV+T +LD LAAETAA++TT HPDYA LAAR+ +S+LHK T
Sbjct: 1 MDYVSPIEVAKKVIDGIYDGVSTIELDNLAAETAASLTTKHPDYAVLAARVAISSLHKVT 60
Query: 91 KKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKT 150
KSFS T+K +Y + + ++G A L+A DVY+II K+AA LDS IIYDRD++YDYFG+KT
Sbjct: 61 SKSFSNTMKRLYTYEDPKTGENASLLAKDVYEIIRKHAATLDSTIIYDRDYNYDYFGYKT 120
Query: 151 LERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGT 210
LERSYLL++ GK+VERPQHMLMRVAVGIHK+DI+SAI+TY++MS++WFTHA+PTLFNAGT
Sbjct: 121 LERSYLLRLDGKIVERPQHMLMRVAVGIHKEDIESAIETYNLMSEKWFTHATPTLFNAGT 180
Query: 211 PRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSN 270
P+ QLSSCFL+ M+DDSI GIYDTLK+CA IS+SAGGIG+S+HN+RATGSYI+GTNGTSN
Sbjct: 181 PKPQLSSCFLLTMQDDSIPGIYDTLKQCAQISQSAGGIGLSIHNVRATGSYIKGTNGTSN 240
Query: 271 GIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFY 330
GI+PML+VFNDTARYVDQGGGKRKGAFA+YLEPWHADIFEFLDL+KNHGKEE+RARDLFY
Sbjct: 241 GIIPMLKVFNDTARYVDQGGGKRKGAFAIYLEPWHADIFEFLDLKKNHGKEENRARDLFY 300
Query: 331 ALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLW 390
ALW PDLFM+RV+ NG WSLFCPNEAPGL D WG +FERLY KYE+EG+A+K V+AQ+LW
Sbjct: 301 ALWTPDLFMKRVEQNGDWSLFCPNEAPGLGDSWGQDFERLYEKYEREGRARKTVKAQDLW 360
Query: 391 FEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIA 450
F +L+SQIETGTPYML+KD N KSNQQNLGTIKSSNLCTE+++YTS E AVCNLAS+A
Sbjct: 361 FAVLESQIETGTPYMLYKDAANSKSNQQNLGTIKSSNLCTEIMEYTSQDEVAVCNLASLA 420
Query: 451 LPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETA 510
LPRY++E G ++ FD +KL +VT VT+NLNK+ID+NYYPV A
Sbjct: 421 LPRYIKEEG----------------GHKTFDHQKLFDVTYHVTKNLNKVIDINYYPVPEA 464
Query: 511 RRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREG 570
R SN+RHRPIG+GVQGLADTFI L MPF+S EA+ LNKDIFETIY+ A+ S ++A ++G
Sbjct: 465 RNSNMRHRPIGLGVQGLADTFIALRMPFESDEARGLNKDIFETIYFAAMTASKDLAKKDG 524
Query: 571 PYETYHGSPVSKGILQPDMWGVNP-SDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQI 629
YET+ GSP+S+G Q DMWGV P S RWDW LR + K+GVRNSLLVAPMPTAST+QI
Sbjct: 525 AYETFKGSPLSEGKFQFDMWGVTPDSGRWDWEELRQEVVKHGVRNSLLVAPMPTASTAQI 584
Query: 630 LGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIP 689
LGNNE FEPYTSNIY RRVLSGEF+VVNKHLL DL +GLW+ +KN II +GSVQ IP
Sbjct: 585 LGNNESFEPYTSNIYVRRVLSGEFMVVNKHLLKDLISLGLWNDRMKNAIIAANGSVQDIP 644
Query: 690 QIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLR 749
IP+ +K +YKTVWEI Q+T++DM+ DRG YI SQSLN+H+ NFGKLTS+HFHAW +
Sbjct: 645 SIPQNIKDLYKTVWEISQRTVIDMSADRGAYICQSQSLNLHVMNVNFGKLTSMHFHAWKK 704
Query: 750 GLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAKMAQMVCSLTNREECMACGS 808
GLKTGMYYLR++AA DAIKFTV+ + V + D + M CSL N + C ACGS
Sbjct: 705 GLKTGMYYLRTKAAVDAIKFTVEKQAAETLEPVYNSQDQNRSDMSCSLDNPDACEACGS 763
>gi|346327607|gb|EGX97203.1| ribonucleoside-diphosphate reductase large chain [Cordyceps
militaris CM01]
Length = 904
Score = 1137 bits (2940), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/778 (68%), Positives = 629/778 (80%), Gaps = 20/778 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG+QE V FDKITAR+ +L YGL EH DPV ++QKV +GVY GVTT QLD+LA
Sbjct: 1 MYVKKRDGRQERVQFDKITARVSRLCYGLDTEHVDPVAITQKVISGVYGGVTTIQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK +S I D+Y++ N R+ +P+IA
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSSVISDLYHYVNPRNDRASPMIAKST 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+ +M++ LDS I+YDRDF+Y YFGFKTLERSYLLK+ GK+VERPQHM+MRVAVGI
Sbjct: 121 YECVMRHKEELDSAIVYDRDFNYQYFGFKTLERSYLLKLNGKIVERPQHMIMRVAVGIWG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D+I+ ++TY++MS ++FTHASPTLFNAGTP+AQLSSCFLV MKDDSIEGIYDTLK CA+
Sbjct: 181 DNIERVVQTYNLMSSKFFTHASPTLFNAGTPQAQLSSCFLVDMKDDSIEGIYDTLKSCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG++VH IRATGSYI GTNGTSNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKMAGGIGMNVHRIRATGSYIAGTNGTSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+FEFLDLRKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+L CPNE PGLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNGEWTLMCPNECPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EFE LY KYE +GK +K ++AQ LW+ IL++Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DCYGDEFEALYEKYELDGKGRKTIKAQKLWYSILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVR-EMGVPMESHPSKLVGSRGSKNRY 479
GTI+SSNLCTE+I+Y +P ETAVCNLAS+ALP YV GV
Sbjct: 421 GTIRSSNLCTEIIEYCAPDETAVCNLASLALPAYVDYNQGV------------------- 461
Query: 480 FDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFD 539
+DF+KL EVT +V NLN+IIDVN+YP+ AR SN+RHRPIG+GVQGLAD F+ L MPF+
Sbjct: 462 YDFKKLHEVTMVVVRNLNRIIDVNHYPIPEARNSNMRHRPIGVGVQGLADAFLALRMPFE 521
Query: 540 STEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWD 599
S EA++LNK IFETIY+ AL +S E+A EGPY+++ GSPVS+GILQ DMW V PSD W+
Sbjct: 522 SPEARELNKQIFETIYHAALTSSMELAKEEGPYQSFKGSPVSEGILQFDMWNVKPSDLWE 581
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR+ I ++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN
Sbjct: 582 WDELREQIKQHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPW 641
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL DL +MGLWS +KN+II D+GS+Q IP IP ++KA+YKTVWEI Q+ +V MA DRG
Sbjct: 642 LLKDLVDMGLWSDAMKNRIIADNGSIQNIPNIPADIKALYKTVWEISQRQIVQMAADRGA 701
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
+ID SQSLNIHM P GK+TS+HF W GLKTGMYYLR++AAA I+FTVD LK
Sbjct: 702 FIDQSQSLNIHMRDPTMGKITSMHFAGWKLGLKTGMYYLRTQAAAAPIQFTVDQEALK 759
>gi|338210538|ref|YP_004654587.1| ribonucleoside-diphosphate reductase subunit alpha [Runella
slithyformis DSM 19594]
gi|336304353|gb|AEI47455.1| ribonucleoside-diphosphate reductase, alpha subunit [Runella
slithyformis DSM 19594]
Length = 815
Score = 1137 bits (2940), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/773 (68%), Positives = 648/773 (83%), Gaps = 16/773 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG++E+V FDKIT+R++KL YGL + P+ V++KV G+Y GVTT++LD LA
Sbjct: 1 MYVIKRDGRRESVKFDKITSRIEKLCYGLDALYVQPIEVAKKVVAGIYDGVTTAELDVLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA+MTT HPDYA LAARI +SNLHKNT KSFS T+K +Y + + ++G A LI+ +
Sbjct: 61 AETAASMTTKHPDYAILAARIAISNLHKNTLKSFSATMKQLYTYTDPKTGENASLISKEA 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+DII K+AA LDS IIYDRD+ YDYFG+KTLE+SYLLKV GK+ ERPQHMLMRVAVGIH
Sbjct: 121 HDIIRKHAALLDSTIIYDRDYGYDYFGYKTLEKSYLLKVNGKIAERPQHMLMRVAVGIHL 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDIDS I+TY+++S+RWFTHA+PTLFNAGTP+ Q+SSCFL+ MKDDSI+GIYDTLK+CA+
Sbjct: 181 DDIDSVIETYNLLSERWFTHATPTLFNAGTPKPQMSSCFLLTMKDDSIDGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HNIRATGSYI+GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 241 ISQSAGGIGLSIHNIRATGSYIKGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIFEFLDL++NHGKEE RARDLFYA+W+PDLFM+RV++N WSL CP+E PGLA
Sbjct: 301 LEPWHADIFEFLDLKRNHGKEELRARDLFYAMWIPDLFMKRVEANDTWSLLCPHECPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE+LY KYE+EGK +K ++AQ+LWF I++SQIETGTPYML+KD N+KSNQ+NL
Sbjct: 361 DSYGDEFEQLYEKYEREGKVRKTIKAQDLWFAIMESQIETGTPYMLYKDHANRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+++YTSP E AVCNLASI+LP++V + G+ G +F
Sbjct: 421 GTIKSSNLCTEIMEYTSPDEVAVCNLASISLPKFVEQ-------------GTDGF--LHF 465
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+ KL E+T +VT+NLNKIID+NYYPV A RSN RHRPIGIG+QGLAD F+++ MPF+S
Sbjct: 466 NHGKLFEITKVVTKNLNKIIDLNYYPVPEAERSNKRHRPIGIGIQGLADAFLMMRMPFES 525
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP-SDRWD 599
EA++LN+DI ETIY A+ S E+A +GPYET+ GSP+S+GI Q DMW V P S RW+
Sbjct: 526 EEARRLNEDIHETIYCGAMTASMELAKTQGPYETWKGSPISQGIFQFDMWNVTPKSGRWN 585
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR + K GVRNSLL+APMPTASTSQILGNNECFEP+TSN+Y RRVLSGEF+VVNK+
Sbjct: 586 WEQLRKDVVKFGVRNSLLLAPMPTASTSQILGNNECFEPFTSNLYVRRVLSGEFIVVNKY 645
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL DL + GLW+ +KNK++ +GSVQKI ++P LK +YKT WEIKQKT+VDMA DRG
Sbjct: 646 LLKDLVKEGLWNDSMKNKLMAHNGSVQKIDEVPSHLKELYKTAWEIKQKTIVDMAADRGA 705
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
YI SQSLNI MD N+GKLTS+HF+AW +GLKTGMYYLR++AA DA+K TV+
Sbjct: 706 YICQSQSLNIFMDNANYGKLTSMHFYAWKKGLKTGMYYLRTQAAVDAVKITVE 758
>gi|400598307|gb|EJP66024.1| ribonucleoside-diphosphate reductase large chain [Beauveria
bassiana ARSEF 2860]
Length = 906
Score = 1136 bits (2939), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 529/778 (67%), Positives = 628/778 (80%), Gaps = 20/778 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG+QE V FDKITAR+ +L YGL EH DPV ++QKV +GVY GVTT QLD+LA
Sbjct: 1 MYVKKRDGRQERVQFDKITARVSRLCYGLDTEHVDPVAITQKVISGVYGGVTTIQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK +S I D+Y++ N R+ +P+IA
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSSVISDLYHYVNPRNDRASPMIAKST 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+ +M++ LDS I+YDRDF+Y YFGFKTLERSYLLK+ GK+VERPQHM+MRVAVGI
Sbjct: 121 YECVMRHKEELDSAIVYDRDFNYQYFGFKTLERSYLLKLNGKIVERPQHMIMRVAVGIWG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D+I+ I+TY++MS ++FTHASPTLFNAGTP+AQLSSCFLV MKDDSIEGIYDTLK CA+
Sbjct: 181 DNIERVIQTYNLMSSKFFTHASPTLFNAGTPQAQLSSCFLVDMKDDSIEGIYDTLKSCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG++VH IRATGSYI GTNGTSNGI+PMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKMAGGIGLNVHRIRATGSYIAGTNGTSNGIIPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+FEFLDLRKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+L CPNE PGLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNGEWTLMCPNECPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EFE LY KYE+EGK +K V+AQ LW+ IL++Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DCYGDEFEALYEKYEREGKGRKTVKAQKLWYSILEAQTETGNPFMLYKDHCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVR-EMGVPMESHPSKLVGSRGSKNRY 479
GTI+SSNLCTE+I+Y +P ETAVCNLAS+ALP YV GV
Sbjct: 421 GTIRSSNLCTEIIEYCAPDETAVCNLASLALPAYVDYNQGV------------------- 461
Query: 480 FDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFD 539
+DF+KL EVT +V NLN+IIDVN+YP+ AR SN+RHRPIG+GVQGLAD F+ L MPF+
Sbjct: 462 YDFKKLHEVTMVVVRNLNRIIDVNHYPIPEARNSNMRHRPIGVGVQGLADAFLALRMPFE 521
Query: 540 STEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWD 599
S EA++LNK IFETIY+ AL S E+A EGPYE++ GSP S+GILQ DMW V PSD W+
Sbjct: 522 SPEARELNKQIFETIYHAALTASVELAKEEGPYESFKGSPASEGILQHDMWNVKPSDLWE 581
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR+ + ++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN
Sbjct: 582 WDELREQVKQHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPW 641
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL DL +MGLWS +KN+II ++GS+Q IP IP ++KA+YKTVWEI Q+ ++ MA DRG
Sbjct: 642 LLKDLVDMGLWSDAMKNRIIAENGSIQNIPNIPADIKALYKTVWEISQRQVIQMAADRGA 701
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
+ID SQSLNIHM P GK+TS+HF W GLKTGMYYLR++AAA I+FTVD LK
Sbjct: 702 FIDQSQSLNIHMRDPTMGKITSMHFAGWKLGLKTGMYYLRTQAAAAPIQFTVDQEALK 759
>gi|348534733|ref|XP_003454856.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Oreochromis niloticus]
Length = 793
Score = 1136 bits (2939), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/812 (65%), Positives = 650/812 (80%), Gaps = 23/812 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+VVKRDG+QE V FDKIT+R++KL YGL++E DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVVKRDGRQERVMFDKITSRIQKLCYGLNMEFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA +TT +PDYA LAARI VSNLHK TKK FS+ ++D+YN+ N + +P+++ D
Sbjct: 61 AEIAATLTTKYPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPLNKRHSPMVSKDT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI++ N RL+S IIYDRDF Y++FGFKTLERSYLLK+ GKV ERPQHMLMRVAVGIH
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNFFGFKTLERSYLLKINGKVAERPQHMLMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI++AI+TY+++S++WFTHASPTLFNAGT R QLSSCFL+ MKDDSIEGIYDTLK CA+
Sbjct: 181 TDIEAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLAMKDDSIEGIYDTLKHCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IR+TGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRSTGSYIAGTNGCSNGLVPMLRVYNNTARYVDQGGNKRPGAFAMY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH D+F+FL+L+KN GKEE RARDLFYALW+PDLFM+RV++N WSL CP + PGL
Sbjct: 301 LEPWHFDVFDFLELKKNTGKEEQRARDLFYALWIPDLFMKRVENNEDWSLMCPADCPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+CWG EFE LYT+YE+EG+ K+VV+AQ LW+ I++SQ ETGTPYM++KD CN+KSNQQNL
Sbjct: 361 ECWGEEFEELYTRYEREGRVKRVVKAQQLWYAIIESQTETGTPYMVYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YTS E AVCNLASIAL YV + R +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMYV-------------------TPERTY 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLA VT ++ NLNK+ID+NYYPVE ARRSN+RHRPIGIGVQGLAD FIL+ PF+S
Sbjct: 462 DFKKLAYVTKVIVRNLNKVIDINYYPVEEARRSNMRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LN IFETIYY AL S E+AA G YETY GSPVSKGILQ DMW P+D WDW
Sbjct: 522 PEAQLLNIQIFETIYYAALEASCELAAELGTYETYEGSPVSKGILQYDMWEKTPTDLWDW 581
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K+GVRNSLL+APMPTAST+QILGNNE E YTSNIY+RRVLSGEF +VN HL
Sbjct: 582 KLLKEKIAKHGVRNSLLLAPMPTASTAQILGNNESIEAYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE GLW+ +KN++I +GS+Q I +IP++LK +YKTVWEI QKT++ MA DRG Y
Sbjct: 642 LKDLTERGLWNEEMKNQLIAHNGSIQNINEIPDDLKQLYKTVWEISQKTVLKMAADRGAY 701
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE-N 779
ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR++ AA+ I+FT++ LKE
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTKPAANPIQFTLNKEKLKEAQ 761
Query: 780 PKVTDDDDAK---MAQMVCSLTNREECMACGS 808
P + + + K A MVCSL N++EC+ CGS
Sbjct: 762 PATSSEQEIKERNKAAMVCSLENKDECLMCGS 793
>gi|149279600|ref|ZP_01885729.1| ribonucleoside diphosphate reductase, alpha subunit [Pedobacter sp.
BAL39]
gi|149229636|gb|EDM35026.1| ribonucleoside diphosphate reductase, alpha subunit [Pedobacter sp.
BAL39]
Length = 792
Score = 1135 bits (2936), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 536/812 (66%), Positives = 658/812 (81%), Gaps = 28/812 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG++EAV FDKITAR++KL YG + E DP+ V++KV G+Y GVTTS+LD LA
Sbjct: 1 MFVIKRDGRKEAVRFDKITARIEKLCYGFNAELVDPIDVAKKVIEGLYDGVTTSELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA++TT HPDYA LA+RI VSNLHKNT KSFS+T++ +Y + + ++ A LIADDV
Sbjct: 61 AETAASLTTKHPDYALLASRIAVSNLHKNTTKSFSKTMEMLYKYVDSKTDKSASLIADDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+++I +NA LDS IIYDRDF +DYFGFKTLE+SYLLK++G++VERPQH+ MRVAVGIHK
Sbjct: 121 WEVIQENADILDSTIIYDRDFGFDYFGFKTLEKSYLLKIEGQIVERPQHLFMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DIDSAIKTY++MS+RWFTHA+PTLFNA TP+ Q+SSCFL+ M+DDSIEGIYDTLK+ A
Sbjct: 181 SDIDSAIKTYNLMSERWFTHATPTLFNAATPKPQMSSCFLLTMQDDSIEGIYDTLKQTAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HNIRATGSYI GTNGTSNGIVPML+VFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISQSAGGIGLSIHNIRATGSYIGGTNGTSNGIVPMLKVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+F FLDLRKNHGKEE RARDLFYALWV DLFM+RV++N WSLFCP+EAPGLA
Sbjct: 301 LEPWHADVFSFLDLRKNHGKEELRARDLFYALWVCDLFMKRVEANEDWSLFCPHEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EFE LY +YEKEG+A+K V+AQ LWF IL SQIETGTPY+L+KD N KSNQQNL
Sbjct: 361 DCFGDEFEALYERYEKEGRARKTVKAQELWFAILDSQIETGTPYLLYKDAANSKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I+YTS E AVCNLAS+ALPR+V N F
Sbjct: 421 GTIKSSNLCTEIIEYTSKDEVAVCNLASLALPRFV--------------------INGEF 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D +KL +VT T NLNKIID NYYPVE A+ SN+RHRP+G+GVQGLAD FIL+ +PF+S
Sbjct: 461 DHQKLYDVTYQATLNLNKIIDYNYYPVEEAKNSNMRHRPVGLGVQGLADAFILMRLPFES 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP-SDRWD 599
A+ LNK+IFETIY+ A+ S ++A GPY+T+ GSP+S+G Q D+W V P S RWD
Sbjct: 521 DGARLLNKEIFETIYFAAMTASHDLAVVNGPYQTFKGSPLSQGKFQFDLWNVTPDSGRWD 580
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR+ + K+GV NSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVNKH
Sbjct: 581 WESLREKVVKDGVYNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 640
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL DL +GLW+P +K++II +GS+Q I +IP+ +K +YKTVWEIK ++++DMA DRG
Sbjct: 641 LLKDLVALGLWTPAMKDRIILANGSIQDIAEIPDYIKELYKTVWEIKMRSIIDMAADRGA 700
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE- 778
YI SQSLN+ ++ PN KLTS+HF+AW +GLKTGMYYLR++AA+ A+KFTV+ K
Sbjct: 701 YICQSQSLNLFINAPNTSKLTSMHFYAWKKGLKTGMYYLRTQAASQAVKFTVENQAGKNM 760
Query: 779 NPKVTDDDDAKMAQM----VCSLTNREECMAC 806
P + D D + ++ VCS+ E C++C
Sbjct: 761 EPVIPDHIDQPVEEITDGPVCSM--EEGCISC 790
>gi|18859325|ref|NP_571530.1| ribonucleoside-diphosphate reductase large subunit [Danio rerio]
gi|3914656|sp|P79732.1|RIR1_DANRE RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleoside-diphosphate reductase
subunit M1; AltName: Full=Ribonucleotide reductase large
subunit; AltName: Full=Ribonucleotide reductase protein
R1 class I
gi|1695829|gb|AAB37102.1| ribonucleotide reductase protein R1 class I [Danio rerio]
Length = 794
Score = 1134 bits (2933), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/813 (66%), Positives = 648/813 (79%), Gaps = 24/813 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG QE V FDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGGQEGVMFDKITSRIQKLCYGLNSDFVDPTQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA TT HPDYA LAARI VSNLHK TKK FSE ++D+YN+ N + +P+I+ +
Sbjct: 61 AETAATSTTKHPDYAILAARIAVSNLHKETKKVFSEVMEDLYNYVNPLNSRHSPMISKET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI++ N RL+S IIYDRDF Y++FGFKTLERSYLLK+ GKV ERPQHMLMRV+VGIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNFFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI +AI+TY+++S++WFTHASPTLFNAGT R QLSSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIAAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLAMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATG YI GTNG SNG+VPMLRV N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGRYIAGTNGNSNGLVPMLRVNNNTARYVDQGGNKRPGAFAMY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIF+FL+L+KN GKEE RARDLFYALW+PDLFM+RV++NG WSL CPN+ PGL
Sbjct: 301 LEPWHFDIFDFLELKKNTGKEEQRARDLFYALWIPDLFMKRVETNGDWSLMCPNDCPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+CWG EFE+LY KYE+EG+AK+VV+AQ LW+ I++SQ ETGTPYML+KD CN+KSN+QNL
Sbjct: 361 ECWGEEFEKLYAKYEQEGRAKRVVKAQQLWYAIIESQTETGTPYMLYKDACNRKSNRQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YTS E AVCNLASIAL YV + R F
Sbjct: 421 GTIKCSNLCTEIVEYTSADEVAVCNLASIALNMYV-------------------TSERTF 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLA VT ++ +NLNKIID+NYYPV+ A SN RHRPIGIGVQGLAD FIL+ PF+S
Sbjct: 462 DFQKLASVTKVIVKNLNKIIDINYYPVKEAENSNKRHRPIGIGVQGLADAFILMRFPFES 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
TEAQ LN IFETIYY AL +S E+AA GPY+TY G PVSKGILQ DMW P+D WDW
Sbjct: 522 TEAQLLNTQIFETIYYAALESSCELAAEYGPYQTYAGCPVSKGILQYDMWEKTPTDLWDW 581
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+ +GVRNSLL+APMPTAST+QILGNNE EPYTSNIY RRVLSGEF +VN HL
Sbjct: 582 AALKEKIANDGVRNSLLLAPMPTASTAQILGNNESIEPYTSNIYHRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE GLW+ +KN+II +GS+Q IP IP++LK +YKTVWEI QKT++ MA DRG Y
Sbjct: 642 LKDLTERGLWNEEMKNQIIAQNGSIQTIPAIPDDLKELYKTVWEISQKTILKMAADRGAY 701
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR++ A+ I+FT++ LKE
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTKPGANPIQFTLNKEKLKETQ 761
Query: 781 KVTDDDDAKM-----AQMVCSLTNREECMACGS 808
K T +D + A MVCSL NR EC+ CGS
Sbjct: 762 KTTSSEDEETKERNKAAMVCSLENRHECLMCGS 794
>gi|189196218|ref|XP_001934447.1| ribonucleoside-diphosphate reductase large chain [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187980326|gb|EDU46952.1| ribonucleoside-diphosphate reductase large chain [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 795
Score = 1133 bits (2931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 532/815 (65%), Positives = 643/815 (78%), Gaps = 31/815 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG++E V FDKITAR+ +L YGL +H DP ++ KV +GVY+GVTT QLD+LA
Sbjct: 1 MFVFKRDGRKERVQFDKITARVSRLCYGLDPDHVDPAAITMKVISGVYQGVTTIQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA LAARI VSNLHK TKK FS ++D+Y++ N ++G P+I+D V
Sbjct: 61 AETAAYMTTTHPDYAILAARIAVSNLHKQTKKQFSAVVEDLYSYVNPKNGKSQPMISDHV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y +I +A L+S I+YDRDF+Y +FGFKTLERSYLL++ GKV ERPQHMLMRVAVGIH
Sbjct: 121 YKVIQDHAEELNSAIVYDRDFNYQFFGFKTLERSYLLRINGKVAERPQHMLMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI AI+TY MSQ++FTHASPTLFNAGTP Q+SSCFL+ MK+DSI+GIYDTLK CA+
Sbjct: 181 EDIPKAIETYDYMSQKYFTHASPTLFNAGTPSPQMSSCFLIDMKEDSIDGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATGSYI GTNGTSNG++PMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIGGTNGTSNGLIPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+F FLDLRKNHGKEE RARDLFYALW+PDLFM+RVQ NG W+L CPNE PGLA
Sbjct: 301 LEPWHADVFGFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVQENGEWTLMCPNECPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LY YEK+ K ++ V+AQ LW+ IL++Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DVYGDEFEALYESYEKQNKGRETVRAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++YT+P E AVCNLAS+ALP +V RG F
Sbjct: 421 GTIRSSNLCTEIVEYTAPDEVAVCNLASLALPSFVDY--------------KRGE----F 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EVT +VT NLNKII+VN+YPVE ARRSN RHRPIG+GVQGLAD F+ L +PF+S
Sbjct: 463 DFQKLHEVTQVVTRNLNKIIEVNHYPVEEARRSNFRHRPIGMGVQGLADAFLALRLPFES 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LN IFETIY+ AL +S EIA GPY+TY GSPVS+GILQ DMW V P+D WDW
Sbjct: 523 EEAKKLNIQIFETIYHAALTSSCEIAKELGPYQTYEGSPVSQGILQYDMWNVTPTDLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+++GVRNSLL+APMPTASTSQILGNNECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 ASLKAKIAEHGVRNSLLIAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL +MGLWS +KN+II D GS+ +IP IPEE K +YKTVWEI Q+T++ MA DRG +
Sbjct: 643 LKDLVDMGLWSENMKNRIIADGGSIARIPNIPEETKTLYKTVWEISQRTIIQMAADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIHM +P GK+TS+HF W GLKTGMYYLR+ AA+ I+FTVD +E
Sbjct: 703 IDQSQSLNIHMKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVD----QEQL 758
Query: 781 KVTDDDDAKMAQ---------MVCSLTNREECMAC 806
KV D + A A+ + CS+ N E C+ C
Sbjct: 759 KVADTNIANEARDGDIYADAVLACSIENPESCVMC 793
>gi|242014390|ref|XP_002427874.1| Ribonucleoside-diphosphate reductase large chain, putative
[Pediculus humanus corporis]
gi|212512343|gb|EEB15136.1| Ribonucleoside-diphosphate reductase large chain, putative
[Pediculus humanus corporis]
Length = 795
Score = 1133 bits (2930), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/811 (64%), Positives = 653/811 (80%), Gaps = 22/811 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR G+ E VHFDKIT+R++KL YGL++++ DP+ ++ KV G+Y GVTT++LD LA
Sbjct: 4 MFVIKRGGRNEEVHFDKITSRIQKLCYGLNLDYVDPIAITVKVINGLYSGVTTAELDSLA 63
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE +A+MTT HPDYA LAARI VSNLHK TK SFS+ + D+YN N + P+++D
Sbjct: 64 AEVSASMTTQHPDYAILAARIAVSNLHKETKVSFSDVMTDLYNMKNSFNQQPTPMLSDYH 123
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YDII+K+A L++ IIY+RD++Y+YFGFKTLERSYLLK+ GKVVERPQHMLMRVAVG+H
Sbjct: 124 YDIIIKHADELNAAIIYERDYNYNYFGFKTLERSYLLKINGKVVERPQHMLMRVAVGLHG 183
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDI SAI+TY+++S+++FTHASPTLF+A T + QLSSCFL+ MK+DSI+GIY+TLK+CA+
Sbjct: 184 DDISSAIETYNLLSEKYFTHASPTLFSAATRKPQLSSCFLLTMKEDSIDGIYETLKQCAL 243
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV++H IR+ G+YI GTNG SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 244 ISKSAGGIGVNIHCIRSKGTYIAGTNGISNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 303
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIFEFLDL+KN GKEE RARDLFYALW+PDLFMERV+ N W L CP PGL+
Sbjct: 304 LEPWHADIFEFLDLKKNTGKEETRARDLFYALWIPDLFMERVEQNQEWCLMCPKTCPGLS 363
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DCWG EF +LY YE++G K V+AQ+LW+ I++SQ+ETGTPYML+KD CN+KSNQQNL
Sbjct: 364 DCWGEEFNKLYLSYEEKGLYVKKVKAQSLWYAIIESQVETGTPYMLYKDACNRKSNQQNL 423
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++Y+SP E AVCNLASIA+ +V+ ++ +
Sbjct: 424 GTIKCSNLCTEIVEYSSPEEIAVCNLASIAVNMFVK-------------------PDKTY 464
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+FEKL +VT I+T+NLNK+ID+ YYPV A+ SNLRHRPIGIG+QGLAD FIL+ +PFDS
Sbjct: 465 NFEKLKDVTKIITKNLNKVIDITYYPVPEAKLSNLRHRPIGIGIQGLADAFILMRLPFDS 524
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ+LN IFETIYY AL SSE+AA GPYETY GSP SKGILQ DMWGV P++ WDW
Sbjct: 525 PEAQKLNIQIFETIYYGALEASSELAAIHGPYETYEGSPASKGILQYDMWGVTPTNLWDW 584
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I K G+RNSLL+APMPTAST+QILGNNE FEPYT+NIY+RRVLSGEF VVN+HL
Sbjct: 585 DALKNKIKKWGIRNSLLIAPMPTASTAQILGNNESFEPYTTNIYTRRVLSGEFQVVNQHL 644
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE+GLW+ +KN II + GS+Q I IP+ELKA+YKTVWEI QK ++ MA DRG +
Sbjct: 645 LKDLTEIGLWNDEMKNTIIANGGSIQNIDSIPKELKALYKTVWEISQKVILKMAADRGAF 704
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD-TSVLKEN 779
ID SQSLNIH+ QPN+GKLTS+HF+AW GLKTGMYYLR++ AA I+FTVD T V N
Sbjct: 705 IDQSQSLNIHIAQPNYGKLTSMHFYAWKLGLKTGMYYLRTKPAAQPIQFTVDKTKVNNAN 764
Query: 780 PK--VTDDDDAKMAQMVCSLTNREECMACGS 808
K T+ D M + CSL N+++C+ CGS
Sbjct: 765 VKEVSTEKDKFNMESISCSLQNKDDCLMCGS 795
>gi|255530603|ref|YP_003090975.1| ribonucleoside-diphosphate reductase subunit alpha [Pedobacter
heparinus DSM 2366]
gi|255343587|gb|ACU02913.1| ribonucleoside-diphosphate reductase, alpha subunit [Pedobacter
heparinus DSM 2366]
Length = 792
Score = 1132 bits (2928), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 536/812 (66%), Positives = 655/812 (80%), Gaps = 28/812 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG++EAV FDKITAR++KL YG + E DP+ V++KV G+Y GVTTS+LD LA
Sbjct: 1 MFVIKRDGRKEAVRFDKITARIEKLCYGFNAELVDPIDVAKKVIEGLYDGVTTSELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA++TT HPDYA LA+RI VSNLHKNT KSFS+T++ +YN+ + ++ A LIADDV
Sbjct: 61 AETAASLTTKHPDYALLASRIAVSNLHKNTTKSFSKTMEMLYNYVDSKTEKPASLIADDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+++I KNA LDS IIYDRDF +DYFGFKTLE+SYLLKV G++VERPQH+ MRVAVGIHK
Sbjct: 121 WEVIEKNADILDSTIIYDRDFGFDYFGFKTLEKSYLLKVDGQIVERPQHLFMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DIDSAI+TY++MS+RWFTHA+PTLFNA TP+ Q+SSCFL+ M+DDSIEGIYDTLK+ A
Sbjct: 181 GDIDSAIETYNLMSERWFTHATPTLFNAATPKPQMSSCFLLTMQDDSIEGIYDTLKQTAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HNIRATGSYI GTNGTSNGIVPML+VFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISQSAGGIGLSIHNIRATGSYIGGTNGTSNGIVPMLKVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+ FLDLRKNHGKEE RARDLFYALWV DLFM RV+ NG WSLFCP+EAPGLA
Sbjct: 301 LEPWHADVLSFLDLRKNHGKEELRARDLFYALWVCDLFMRRVEENGDWSLFCPHEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EF+ LY +YE+EG+A+K ++AQ LWF IL SQIETGTPY+L+KD N KSNQQNL
Sbjct: 361 DCFGEEFDALYERYEQEGRARKTIKAQELWFAILDSQIETGTPYLLYKDAANSKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I+YTS E AVCNLAS+ALPR+V N F
Sbjct: 421 GTIKSSNLCTEIIEYTSKDEVAVCNLASLALPRFV--------------------INGEF 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D +KL +VT T NLNKIID NYYPVE AR SN+RHRP+G+GVQGLAD FIL+ +PF+S
Sbjct: 461 DHQKLYDVTYQATVNLNKIIDYNYYPVEEARNSNMRHRPVGLGVQGLADAFILMRLPFES 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP-SDRWD 599
A+ LNK+IFETIY+ A+ S ++A + GPYET+ GSP+S+G Q D+W V P S RWD
Sbjct: 521 EGARILNKEIFETIYFAAMTASHDLAVKNGPYETFKGSPLSQGKFQFDLWKVQPDSGRWD 580
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR+ + K+GV NSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVNKH
Sbjct: 581 WETLREKVVKDGVYNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKH 640
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL DL +GLW+P +K++II +GS+Q I +IP+ +K +YKTVWEIK ++++DMA DRG
Sbjct: 641 LLKDLVALGLWTPAMKDRIILANGSIQDIAEIPDYIKELYKTVWEIKMRSIIDMAADRGA 700
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN 779
YI SQSLN+ ++ PN KLTS+HF+AW +GLKTGMYYLR++AA+ A+KFTV+ K
Sbjct: 701 YICQSQSLNLFINAPNTSKLTSMHFYAWKKGLKTGMYYLRTQAASQAVKFTVENQAGKNM 760
Query: 780 PKVTDDDDAKMAQM-----VCSLTNREECMAC 806
V + + A+ VCS+ E C++C
Sbjct: 761 EPVIPEHIEQSAEEIVEGPVCSM--EEGCISC 790
>gi|389624205|ref|XP_003709756.1| ribonucleoside-diphosphate reductase large subunit [Magnaporthe
oryzae 70-15]
gi|351649285|gb|EHA57144.1| ribonucleoside-diphosphate reductase large subunit [Magnaporthe
oryzae 70-15]
gi|440467397|gb|ELQ36621.1| ribonucleoside-diphosphate reductase large chain [Magnaporthe
oryzae Y34]
gi|440486678|gb|ELQ66519.1| ribonucleoside-diphosphate reductase large chain [Magnaporthe
oryzae P131]
Length = 909
Score = 1132 bits (2928), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/777 (67%), Positives = 628/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG+QE V FDKITAR+ +L YGL EH DPV ++QKV +GVY GVTT QLD+LA
Sbjct: 1 MFVRKRDGRQERVQFDKITARVSRLCYGLDPEHVDPVAITQKVISGVYGGVTTIQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK FS + D++++ N ++G +P+IA D
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSSVVSDLFHYVNPKNGKLSPMIAQDT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YD +M++ LDS I+YDRDF+Y YFGFKTLERSYLLK+ GK+VERPQHM+MRVAVGI
Sbjct: 121 YDCVMRHKEDLDSAIVYDRDFNYQYFGFKTLERSYLLKLNGKIVERPQHMIMRVAVGIWG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D+I+ I+TY++MS ++FTHASPTLFNAGTP+AQLSSCFLV MKDDSIEGIYDTLK CA+
Sbjct: 181 DNIERVIETYNLMSSKFFTHASPTLFNAGTPQAQLSSCFLVDMKDDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG++VH IRATGSYI GTNGTSNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKMAGGIGLNVHRIRATGSYIAGTNGTSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+FEFLDLRKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+L CPNE PGLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEIRARDLFLALWIPDLFMKRVEKNGDWTLMCPNECPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EFE LY KYE+ GK +K ++AQ LW+ IL++Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DCYGEEFEALYEKYEQAGKGRKTIKAQKLWYSILEAQTETGNPFMLYKDHCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+I+Y++P E AVCNLAS+ALP++V + H + +
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASLALPQFV-------DYHKGE-----------Y 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DFEKL EVT +V NLNKII+VNYYPV+ AR SN+RHRPIG+GVQGLAD F+ L +PF+S
Sbjct: 463 DFEKLHEVTQVVVRNLNKIIEVNYYPVQEARNSNMRHRPIGLGVQGLADAFLALRLPFES 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+ LNK IFETIY+ AL S ++A +GPY TY GSPVS+GILQ DMW V PSD WDW
Sbjct: 523 PEARDLNKKIFETIYHAALTASCKLAEEQGPYSTYEGSPVSQGILQYDMWNVKPSDLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I ++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 DALKANIKQHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL E+GLWS +KN+II + GS+Q I IPE+ K +YKTVWEI Q+T+V MA DRG +
Sbjct: 643 LKDLVELGLWSDDMKNRIIAEGGSIQNIASIPEDTKKLYKTVWEISQRTVVQMAADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
ID SQSLNIHM P GK+TS+HF W GLKTGMYYLR++AAA I+FTVD L+
Sbjct: 703 IDQSQSLNIHMRDPTMGKITSMHFTGWKLGLKTGMYYLRTQAAAQPIQFTVDQEALR 759
>gi|380488165|emb|CCF37565.1| ribonucleoside-diphosphate reductase large subunit [Colletotrichum
higginsianum]
Length = 895
Score = 1132 bits (2927), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/778 (67%), Positives = 629/778 (80%), Gaps = 20/778 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG+QE V FDKITAR+ +L YGL +EH DPV ++QKV +GVY GVTT QLD+LA
Sbjct: 1 MFVRKRDGRQERVQFDKITARVSRLCYGLDMEHVDPVAITQKVISGVYGGVTTVQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK +S + D+Y++ N ++G +P+IA D
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSAVVSDLYHYVNPKNGKASPMIAKDT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YD +M++ LDS I+YDRDF+Y YFGFKTLERSYLLK+ GK+ ERPQHM+MRVAVGI
Sbjct: 121 YDAVMRHKEELDSAIVYDRDFNYQYFGFKTLERSYLLKLDGKIAERPQHMIMRVAVGIWG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD++ I+TY++MS ++FTHASPTLFNAGTP+AQLSSCFLV MK+DSIEGIYDTLK CA+
Sbjct: 181 DDVERVIETYNLMSSKFFTHASPTLFNAGTPQAQLSSCFLVDMKEDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG++VH IRATGSYI GTNGTSNG+VPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKMAGGIGLNVHRIRATGSYIAGTNGTSNGVVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+F+FLDLRKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+L CPNE PGLA
Sbjct: 301 LEPWHADVFDFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNGDWTLMCPNECPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EFE LY KYE+ GK +K ++AQ LW+ IL++Q ETG P+ML+KD N+KSNQ+NL
Sbjct: 361 DCYGEEFEALYEKYEQMGKGRKTMKAQKLWYAILEAQTETGNPFMLYKDAANRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVR-EMGVPMESHPSKLVGSRGSKNRY 479
GTI+SSNLCTE+I+Y +P E AVCNLAS+ALP +V GV
Sbjct: 421 GTIRSSNLCTEIIEYCAPDEVAVCNLASLALPTFVDYNEGV------------------- 461
Query: 480 FDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFD 539
+DF+KL EVT +V NLN+IIDVN+YPV+ AR SN+RHRPIG+GVQGLAD F+ L MPF+
Sbjct: 462 YDFQKLHEVTQVVVRNLNRIIDVNHYPVQEARNSNMRHRPIGLGVQGLADAFLALRMPFE 521
Query: 540 STEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWD 599
S EA+ LNK IFETIY+ AL S ++A EGPY+TY GSPVS+GILQ DMW V PSD WD
Sbjct: 522 SPEARDLNKKIFETIYHAALTMSVQLAKEEGPYQTYEGSPVSQGILQYDMWNVKPSDLWD 581
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L++ I ++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN
Sbjct: 582 WDSLKEQIKQHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPW 641
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL DL +MGLWS +KN+II ++GS+Q IP IP E+KA+YKTVWEI Q+T+V MA DRG
Sbjct: 642 LLKDLVDMGLWSDAMKNRIIAENGSIQNIPNIPTEVKALYKTVWEISQRTVVQMAADRGA 701
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
+ID SQSLNIHM P GK+TS+HF W GLKTGMYYLR++AAA I+FTVD LK
Sbjct: 702 FIDQSQSLNIHMKDPTMGKITSMHFAGWKLGLKTGMYYLRTQAAAAPIQFTVDQEALK 759
>gi|449548832|gb|EMD39798.1| hypothetical protein CERSUDRAFT_112065 [Ceriporiopsis subvermispora
B]
Length = 875
Score = 1131 bits (2925), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/777 (66%), Positives = 633/777 (81%), Gaps = 20/777 (2%)
Query: 2 YVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAA 61
YV KR ++E V FDKITAR+ KL YGL EH DP+ V+QKV GVY GVTT++LD LAA
Sbjct: 3 YVFKRGTRKERVQFDKITARISKLCYGLDKEHVDPIGVAQKVIAGVYNGVTTAELDNLAA 62
Query: 62 ETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVY 121
ETAA +TT HPDYA LAARI VSNLHK TKK+FS + D+Y + N ++G A +I+ DVY
Sbjct: 63 ETAAYLTTKHPDYAILAARIAVSNLHKETKKNFSAVVHDLYTYVNPKNGRAAGMISKDVY 122
Query: 122 DIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKD 181
DI+M+NA +LDS IIYDRDF+Y+YFGFKTLERSYLLK+ G+ ERPQHMLMRVAVGIH
Sbjct: 123 DIVMENAEQLDSAIIYDRDFNYNYFGFKTLERSYLLKINGRTAERPQHMLMRVAVGIHGK 182
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAII 241
D+ A++TY++MS+R+FTHASPTLFNAGTP AQLSSCFLVCMKDDSIEGIYDTLK CA+I
Sbjct: 183 DLGRALETYNLMSERFFTHASPTLFNAGTPHAQLSSCFLVCMKDDSIEGIYDTLKNCAMI 242
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SK+AGGIG+++HNIRATGSYI GTNG SNGIVPMLR ++ TARYVDQGG KR GAFA+Y+
Sbjct: 243 SKTAGGIGLNIHNIRATGSYIAGTNGYSNGIVPMLRAYDATARYVDQGGNKRPGAFAIYI 302
Query: 302 EPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLAD 361
EPWHAD+FEF+DLRKNHGKEE RARDLFYALW+PDLFM+RV++ G WSLFCPNEAPGL +
Sbjct: 303 EPWHADVFEFIDLRKNHGKEEVRARDLFYALWIPDLFMKRVEAGGQWSLFCPNEAPGLHE 362
Query: 362 CWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG 421
WG EFERLY +YE+EG+A+K ++AQ LW+ I+++QIETG P+ML+KD N KSNQQNLG
Sbjct: 363 VWGEEFERLYEQYEREGRARKTIEAQKLWYAIMEAQIETGGPFMLYKDAANAKSNQQNLG 422
Query: 422 TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFD 481
TIKSSNLCTE+I+Y++P ETAVCNLASIALP ++ +N ++
Sbjct: 423 TIKSSNLCTEIIEYSAPDETAVCNLASIALPSFI--------------------ENGEYN 462
Query: 482 FEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDST 541
F++L EV +V NLN+IIDVNYYP+ ARRSN+RHRPIG+GVQGLAD F+ L MPFDS
Sbjct: 463 FQRLHEVAKVVAFNLNRIIDVNYYPIPEARRSNMRHRPIGVGVQGLADAFMALRMPFDSP 522
Query: 542 EAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWG 601
EA+ LNK IFETIY+ A+ SS++A ++GPYETY GSP SKG LQ D+WGV P+D WDW
Sbjct: 523 EARLLNKQIFETIYHAAVEASSDMAEKDGPYETYEGSPASKGELQYDLWGVTPTDLWDWT 582
Query: 602 GLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
L+ +++ G+RNSLL+APMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VV LL
Sbjct: 583 SLKAKVARTGLRNSLLLAPMPTASTSQILGFNECFEPYTSNIYTRRVLAGEFQVVCPWLL 642
Query: 662 HDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYI 721
+L + LW+ +KN II GSVQKIP+IP+++KAIYKTVWEI QK ++D+A DRG +I
Sbjct: 643 RELVDRRLWNDDMKNMIIAHGGSVQKIPEIPDDIKAIYKTVWEISQKKVIDLAADRGAFI 702
Query: 722 DHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE 778
SQSLN+H+ P G+LTS+HF+ W +GLKTGMYYLR+R AA AI+FTVD S LK+
Sbjct: 703 CQSQSLNVHLQSPTSGQLTSMHFYGWKKGLKTGMYYLRTRPAAQAIQFTVDQSYLKD 759
>gi|169603614|ref|XP_001795228.1| hypothetical protein SNOG_04815 [Phaeosphaeria nodorum SN15]
gi|111066086|gb|EAT87206.1| hypothetical protein SNOG_04815 [Phaeosphaeria nodorum SN15]
Length = 903
Score = 1131 bits (2925), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/789 (66%), Positives = 632/789 (80%), Gaps = 22/789 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG++E V FDKITAR+ +L YGL +H DP ++ KV +GVY GVTT QLD+LA
Sbjct: 1 MFVFKRDGRKERVQFDKITARVSRLCYGLDPDHVDPAAITMKVISGVYHGVTTIQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA LAARI VSNLHK TKK FS + D+Y + N ++G P+I+D +
Sbjct: 61 AETAAYMTTTHPDYAILAARIAVSNLHKQTKKQFSAVVSDLYTYVNPKNGKSQPMISDYI 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y II +A L+S I+YDRDF+Y +FGFKTLERSYLL++ GKV ERPQHMLMRVAVGIH
Sbjct: 121 YKIIQDHAEELNSAIVYDRDFNYQFFGFKTLERSYLLRINGKVAERPQHMLMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI+ AI+TY MSQ++FTHASPTLFNAGTP Q+SSCFL+ MK+DSI+GIYDTLK CA+
Sbjct: 181 EDIEKAIETYDYMSQKYFTHASPTLFNAGTPNPQMSSCFLIDMKEDSIDGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATGSYI GTNGTSNG++PMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIGGTNGTSNGLIPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+F FLDLRKNHGKEE RARDLFYALW+PDLFM+RVQ NG W+L CPNE PGLA
Sbjct: 301 LEPWHADVFGFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVQENGEWTLMCPNECPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LYT+YE+E K ++ V+AQ LW+ IL++Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DVYGDEFEELYTRYERENKGRETVRAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE++++T+P E AVCNLAS+ALP +V K F
Sbjct: 421 GTIRSSNLCTEIVEFTAPDEVAVCNLASLALPSFV------------------DYKRGEF 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL EVT +VT NLNKII+VN+YPVE ARRSN RHRPIG+GVQGLAD F+ L +PF+S
Sbjct: 463 DFHKLHEVTMVVTRNLNKIIEVNHYPVEEARRSNFRHRPIGLGVQGLADAFLALRLPFES 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LN IFETIY+ AL +S +IA GPY TY GSPVSKG LQ D+WGV PSD WDW
Sbjct: 523 PEAKKLNTQIFETIYHAALTSSCDIAKELGPYATYEGSPVSKGQLQYDLWGVTPSDLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I+++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 ASLKDKIAQHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL +MGLWS +KN+II D GS+Q+IP IPEE K +YKTVWEI Q+T++ MA DRG +
Sbjct: 643 LKDLVDMGLWSENMKNRIIADGGSIQRIPNIPEETKTLYKTVWEISQRTIIQMAADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIHM +P GK+TS+HF W GLKTGMYYLR+ AA+ I+FTVD L
Sbjct: 703 IDQSQSLNIHMKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEAL---- 758
Query: 781 KVTDDDDAK 789
+VTD + A+
Sbjct: 759 QVTDTNVAR 767
>gi|310798516|gb|EFQ33409.1| ribonucleotide reductase [Glomerella graminicola M1.001]
Length = 894
Score = 1130 bits (2924), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/778 (67%), Positives = 628/778 (80%), Gaps = 20/778 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG+QE V FDKITAR+ +L YGL ++H DPV ++QKV +GVY GVTT QLD+LA
Sbjct: 1 MFVRKRDGRQERVQFDKITARVSRLCYGLDMDHVDPVAITQKVISGVYGGVTTVQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK +S + D+Y++ N ++ +P+IA D
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSSVVSDLYHYVNPKNNKPSPMIAKDT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YD +M++ LDS I+YDRDF+Y YFGFKTLERSYLLK+ GK+ ERPQHM+MRVAVGI
Sbjct: 121 YDAVMRHKEELDSAIVYDRDFNYQYFGFKTLERSYLLKLDGKIAERPQHMIMRVAVGIWG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD++ I+TY++MS ++FTHASPTLFNAGTP+AQLSSCFLV MK+DSIEGIYDTLK CA+
Sbjct: 181 DDVERVIETYNLMSSKFFTHASPTLFNAGTPQAQLSSCFLVDMKEDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG++VH IRATGSYI GTNGTSNG+VPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKMAGGIGLNVHRIRATGSYIAGTNGTSNGVVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+F+FLDLRKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+L CPNE PGLA
Sbjct: 301 LEPWHADVFDFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNGDWTLMCPNECPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EFE LY KYE+ GK +K ++AQ LW+ IL++Q ETG P+ML+KD N+KSNQ+NL
Sbjct: 361 DCYGEEFEALYEKYEQMGKGRKTIKAQKLWYAILEAQTETGNPFMLYKDAANRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVR-EMGVPMESHPSKLVGSRGSKNRY 479
GTI+SSNLCTE+I+Y +P E AVCNLAS+ALP +V GV
Sbjct: 421 GTIRSSNLCTEIIEYCAPDEVAVCNLASLALPTFVDYNEGV------------------- 461
Query: 480 FDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFD 539
+DF+KL EVT +V NLN+IIDVN+YPV+ AR SN+RHRPIG+GVQGLAD F+ L MPF+
Sbjct: 462 YDFQKLHEVTQVVVRNLNRIIDVNHYPVQEARNSNMRHRPIGLGVQGLADAFLALRMPFE 521
Query: 540 STEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWD 599
S EA+ LNK IFETIY+ AL S ++A EGPYETY GSPVS+GILQ DMW V PSD WD
Sbjct: 522 SPEARDLNKKIFETIYHAALTMSVQLAREEGPYETYEGSPVSQGILQYDMWNVKPSDLWD 581
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L++ I ++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN
Sbjct: 582 WDALKEQIKQHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPW 641
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL DL +MGLWS +KN+II ++GS+Q IP IP E+KA+YKTVWEI Q+T+V MA DRG
Sbjct: 642 LLKDLVDMGLWSDAMKNRIIAENGSIQNIPNIPTEVKALYKTVWEISQRTVVQMAADRGA 701
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
+ID SQSLNIHM P GK+TS+HF W GLKTGMYYLR++AAA I+FTVD LK
Sbjct: 702 FIDQSQSLNIHMKDPTMGKITSMHFAGWKLGLKTGMYYLRTQAAAAPIQFTVDQEALK 759
>gi|358387135|gb|EHK24730.1| hypothetical protein TRIVIDRAFT_61504 [Trichoderma virens Gv29-8]
Length = 903
Score = 1130 bits (2922), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 525/777 (67%), Positives = 626/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG+QE V FDKITAR+ +L YGL +H DPV ++QKV +GVY GVTT QLD+LA
Sbjct: 1 MYVRKRDGRQERVQFDKITARVSRLCYGLDTDHVDPVAITQKVISGVYGGVTTVQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK +S + D+Y++ N ++ +P+I+ D
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSAVVSDLYHYVNPKNSRASPMISKDT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+ +M++ LDS I+YDRDF+Y YFGFKTLERSYLLK+ GK+VERPQHM+MRVAVGI
Sbjct: 121 YECVMRHKEELDSAIVYDRDFNYQYFGFKTLERSYLLKLDGKIVERPQHMIMRVAVGIWG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDI+ ++TYH+MS ++FTHASPTLFNAGTP+AQLSSCFLV MKDDSIEGIYDTLK CA+
Sbjct: 181 DDIERVLETYHLMSSKFFTHASPTLFNAGTPQAQLSSCFLVDMKDDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG++VH IRATGSYI GTNGTSNGI+PMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKMAGGIGLNVHRIRATGSYIAGTNGTSNGIIPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+FEFLDLRKNHGKEE RARDLF ALW+PDLFM+RV+ N W+L CPNE PGLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNLDWTLMCPNECPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EFE LY KYEKEG+ +K ++AQ LW+ IL++Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DCYGEEFEALYEKYEKEGRGRKTIRAQKLWYSILEAQTETGNPFMLYKDHCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+I+Y +P E AVCNLAS+ALP YV +
Sbjct: 421 GTIRSSNLCTEIIEYCAPDEVAVCNLASLALPAYV------------------DYNEGCY 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EVT +V NLNKIIDVN+YPV+ AR SN+RHRPIG+GVQGLAD F+ L MPF+S
Sbjct: 463 DFKKLHEVTKVVVRNLNKIIDVNHYPVQEARNSNMRHRPIGVGVQGLADAFLALRMPFES 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LNK IFETIY+ AL S EIA EGPY+++ GSP S+GILQ DMW V PSD W+W
Sbjct: 523 PEARELNKQIFETIYHAALEASMEIAKVEGPYQSFKGSPASEGILQFDMWDVKPSDLWEW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I ++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 DSLKEQIKEHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL + GLWS +KN+II ++GS+Q IP IPE++KA+YKTVWEI Q+ +V MA DRG +
Sbjct: 643 LKDLVDTGLWSDAMKNRIIAENGSIQNIPNIPEDIKALYKTVWEISQRQIVQMAADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
ID SQSLNIHM P GK+TS+HF W GLKTGMYYLR++AAA I+FTVD LK
Sbjct: 703 IDQSQSLNIHMKDPTMGKITSMHFTGWKLGLKTGMYYLRTQAAAAPIQFTVDQEALK 759
>gi|213512716|ref|NP_001133985.1| Ribonucleoside-diphosphate reductase large subunit [Salmo salar]
gi|209156060|gb|ACI34262.1| Ribonucleoside-diphosphate reductase large subunit [Salmo salar]
gi|223648756|gb|ACN11136.1| Ribonucleoside-diphosphate reductase large subunit [Salmo salar]
Length = 792
Score = 1129 bits (2920), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/811 (64%), Positives = 649/811 (80%), Gaps = 22/811 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG++E V FDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGREERVMFDKITSRIQKLCYGLNSDFVDPTQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA +TT HPDYA LAARI VSNLHK TKK FS+ ++D+YN+ N + +P++A +
Sbjct: 61 AEIAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVVEDLYNYVNPLNRCHSPMVAKET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI+++N RL+S II+DRDF Y++FGFKTLERSYLLK+ GKV ERPQHMLMRVAVGIH+
Sbjct: 121 LDIVLENKDRLNSAIIFDRDFSYNFFGFKTLERSYLLKINGKVAERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DID+ I+TY+++S++WFTHASPTLFNAGT R QLSSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 TDIDAVIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLAMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAMY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH D+F+FLDL+KN GKEE RARDLFY +W+PDLFM+RV+SN WSL CP++ PGL
Sbjct: 301 LEPWHFDVFDFLDLKKNTGKEEQRARDLFYGMWIPDLFMKRVESNQDWSLMCPSDCPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+CWG EFE+LYT+YE+EG+ K+VV+AQ +W I++SQ ETGTPYML+KD CN+KSNQQNL
Sbjct: 361 ECWGEEFEKLYTRYEQEGRVKRVVKAQQVWHAIIESQTETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+++YTS E AVCNLASIAL YV + R F
Sbjct: 421 GTIKSSNLCTEIVEYTSHDEVAVCNLASIALNMYV-------------------TPERTF 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KLA VT ++ NLNKII++NYYPV A SN RHRPIGIGVQGLAD FIL+ PF+S
Sbjct: 462 DFSKLAYVTKVIVRNLNKIIEINYYPVVEAENSNKRHRPIGIGVQGLADAFILMRFPFES 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ+LN IFETIYY AL +S E+AA G YETY GSPVSKGILQ +MW P+D WDW
Sbjct: 522 AEAQKLNTQIFETIYYAALESSCELAAELGAYETYPGSPVSKGILQYNMWDKTPTDLWDW 581
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K+GVRNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 TLLKENIAKHGVRNSLLLAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE GLW+ +KN++I +GS+Q I +IP++LK +YKTVWEI QKT++ MA DRG +
Sbjct: 642 LKDLTERGLWNEEMKNQLIGQNGSIQGIAEIPDDLKELYKTVWEISQKTILKMAADRGAF 701
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR++ AA+ I+FT++ LKE+
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTKPAANPIQFTLNKEKLKESQ 761
Query: 781 KVTDDDDAK---MAQMVCSLTNREECMACGS 808
+ + K A MVCSL NR++C+ CGS
Sbjct: 762 SAKNLEALKELNRAAMVCSLENRDDCLMCGS 792
>gi|320593756|gb|EFX06165.1| ribonucleotide reductase large subunit [Grosmannia clavigera
kw1407]
Length = 913
Score = 1129 bits (2920), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/776 (67%), Positives = 625/776 (80%), Gaps = 18/776 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG+QE V FDKITAR+ +L YGL EH DPV ++QKV +GVY GVTT+QLD+LA
Sbjct: 1 MFVRKRDGRQERVQFDKITARVSRLCYGLDTEHIDPVAITQKVISGVYGGVTTAQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK +S I D+YN+ N R+ +P+I+ +
Sbjct: 61 AETAAYMTVTHPDYAVLAARIAVSNLHKQTKKQWSAVITDLYNYVNPRNNTLSPMISKET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YD +M++ DS I+YDRDF+Y YFGFKTLERSYLLK+ GK+VERPQHM+MRVAVGI
Sbjct: 121 YDCVMRHKEDFDSAIVYDRDFNYQYFGFKTLERSYLLKLNGKIVERPQHMIMRVAVGIWG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D+++ ++TY+ MS ++FTHASPTLFNAGTP+AQ+SSCFLV MKDDSIEGIYDTLK CA+
Sbjct: 181 DNVERVVETYNYMSNKFFTHASPTLFNAGTPQAQMSSCFLVDMKDDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATGSYI GTNGTSNGIVPMLRV+N+TARYVDQGG KR GAF +Y
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIAGTNGTSNGIVPMLRVYNNTARYVDQGGNKRPGAFCIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+FEFLDLRKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+L CPNE PG+A
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEIRARDLFLALWIPDLFMKRVEKNGEWTLMCPNECPGMA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EFE LY KYE+EG+ +K V+AQ LW+ IL++Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DCYGEEFEALYEKYEREGRGRKTVKAQKLWYAILEAQTETGNPFMLYKDHCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++Y++P E AVCNLAS+ALP +V N +
Sbjct: 421 GTIRSSNLCTEIVEYSAPDEVAVCNLASLALPSFV------------------DYTNETY 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EV +V NLN +IDVNYYPV A+ SN+RHRPIG+GVQGLAD F+ L MPF+S
Sbjct: 463 DFKKLHEVAQLVVRNLNHVIDVNYYPVPEAKNSNMRHRPIGLGVQGLADAFLALRMPFES 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LNK IFETIY+ AL S E+A EG Y TY GSPVS+GILQPDMW V PSD WDW
Sbjct: 523 PEARELNKQIFETIYHAALTASCELAKIEGTYSTYEGSPVSQGILQPDMWDVKPSDLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I ++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 DSLRLKIKEHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL +MGLWS +KN+II + GS+Q IP IP ++KA+YKTVWEI Q+T+V MA DRG +
Sbjct: 643 LKDLVDMGLWSDNMKNRIIAEGGSIQNIPNIPADIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
ID SQSLNIHM +P GK+TS+HF W GLKTGMYYLR++AAA I+FTVD L
Sbjct: 703 IDQSQSLNIHMREPTMGKITSMHFTGWKLGLKTGMYYLRTQAAAQPIQFTVDQQAL 758
>gi|225683656|gb|EEH21940.1| ribonucleoside-diphosphate reductase large chain [Paracoccidioides
brasiliensis Pb03]
Length = 797
Score = 1129 bits (2919), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/817 (64%), Positives = 640/817 (78%), Gaps = 33/817 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG++E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK FS I D+Y+++N ++G AP+I+
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSSVIDDLYHYHNPKNGRPAPMISQST 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+I+M++A +S I+YDRDF+Y YFGFKTLERSYLL++ GKV ERPQHM+MRVA+GIH
Sbjct: 121 YEIVMRHADEFNSAIVYDRDFNYQYFGFKTLERSYLLRINGKVAERPQHMIMRVAIGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD++ I+TY++MSQ++FTHASPTLFNAGTP+ Q++SCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 DDVERVIETYNLMSQKYFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+++H IR TGSYI GTNG+SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNIHRIRGTGSYIAGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIFEFLDLRKNHGKEE RARDLF ALW PDLFM+RV+ NG W+LFCPNEAPGLA
Sbjct: 301 LEPWHMDIFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNGEWTLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LY KYEKEG+ KK ++AQ LW+ IL++Q ETG P+ML+KD CNKKSNQ+NL
Sbjct: 361 DVYGDEFEALYEKYEKEGRGKKTIKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+I+Y SP E AVCNLASIALP +V + RG +
Sbjct: 421 GTIRSSNLCTEIIEYCSPDEVAVCNLASIALPTFVDAV--------------RGE----Y 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL EVT +V NLN+IID NYYPVE A+RSN RHRPI GVQGLAD F+ L +PFDS
Sbjct: 463 DFGKLHEVTQVVVRNLNRIIDRNYYPVEEAKRSNFRHRPIACGVQGLADAFLALRLPFDS 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+QLN IFETIY+ L S E+A +GPY +Y GSPVS+GILQ DMWGV P+D WDW
Sbjct: 523 PEAKQLNIQIFETIYHACLTASCELAKVDGPYSSYEGSPVSQGILQYDMWGVTPTDLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+K+GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF +VN L
Sbjct: 583 DSLKQEIAKHGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQIVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++GLWS +KN+II D GS+Q IP IP+++KA+YKTVWEI Q+T+V MA DRG +
Sbjct: 643 LKDLVDLGLWSDNMKNRIIADGGSIQNIPNIPQDIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +P GK+TS+HF W GLKTGMYYLR+ AA+ I+FTVD +E
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFTGWKLGLKTGMYYLRTMAASAPIQFTVD----QEQL 758
Query: 781 KVTDDDDAKM-----------AQMVCSLTNREECMAC 806
KV D + A++ A S+ N E C+ C
Sbjct: 759 KVADTNVARVNGAMKKRAAVSASYTSSIENPESCLMC 795
>gi|31982026|ref|NP_033129.2| ribonucleoside-diphosphate reductase large subunit [Mus musculus]
gi|341941976|sp|P07742.2|RIR1_MOUSE RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleoside-diphosphate reductase
subunit M1; AltName: Full=Ribonucleotide reductase large
subunit
gi|16741219|gb|AAH16450.1| Ribonucleotide reductase M1 [Mus musculus]
gi|26352964|dbj|BAC40112.1| unnamed protein product [Mus musculus]
gi|74205882|dbj|BAE23230.1| unnamed protein product [Mus musculus]
gi|74214440|dbj|BAE40455.1| unnamed protein product [Mus musculus]
gi|148684655|gb|EDL16602.1| ribonucleotide reductase M1, isoform CRA_b [Mus musculus]
Length = 792
Score = 1129 bits (2919), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 539/811 (66%), Positives = 652/811 (80%), Gaps = 22/811 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG+QE V FDKIT+R++KL YGL+++ DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT HPDYA LAARI VSNLHK TKK FS+ ++D+YN+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGRHSPMVASST 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI+M N RL+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRV+VGIHK
Sbjct: 121 LDIVMANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+AI+TY+++S++WFTHASPTLFNAGT R QLSSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV++N WSL CPNE PGL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE+LY YEK+G+ +KVV+AQ LW+ I++SQ ETGTPYML+KD+CN+KSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YTS E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TPEHTY 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DFEKLAEVT ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FIL+ PF+S
Sbjct: 462 DFEKLAEVTKVIVRNLNKIIDINYYPIPEAHLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S E+A GPYETY GSPVSKGILQ DMW V P+D WDW
Sbjct: 522 PEAQLLNKQIFETIYYGALEASCELAKEYGPYETYEGSPVSKGILQYDMWNVAPTDLWDW 581
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 KPLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE GLW+ +KN+II +GS+Q IP+IP++LK +YKTVWEI QKT++ MA +RG +
Sbjct: 642 LKDLTERGLWNEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR+R AA+ I+FT++ LK+
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 KVTDDDDA---KMAQMVCSLTNREECMACGS 808
K +++ A MVCSL NREEC+ CGS
Sbjct: 762 KALKEEEEKERNTAAMVCSLENREECLMCGS 792
>gi|322696603|gb|EFY88393.1| ribonucleoside-diphosphate reductase large chain [Metarhizium
acridum CQMa 102]
Length = 905
Score = 1129 bits (2919), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/776 (67%), Positives = 629/776 (81%), Gaps = 18/776 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG+QE V FDKITAR+ +L YGL EH DPV ++QKV +GVY GVTT QLD+LA
Sbjct: 1 MFVRKRDGRQERVQFDKITARVSRLCYGLDTEHVDPVAITQKVISGVYGGVTTVQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK +S + D+Y++ N ++ +P+I+ D
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSSVVSDLYHYVNPKNERASPMISKDT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+ +M++ LDS I+YDRDF+Y YFGFKTLERSYLLK+ GK+VERPQHM+MRVAVGI
Sbjct: 121 YECVMRHKDELDSAIVYDRDFNYQYFGFKTLERSYLLKLNGKIVERPQHMIMRVAVGIWG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D+I+ I+TY++MS ++FTHASPTLFNAGTP+AQLSSCFLV MKDDSIEGIYDTLK CA+
Sbjct: 181 DNIERVIETYNLMSSKFFTHASPTLFNAGTPQAQLSSCFLVDMKDDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG++VH IRATGSYI GTNGTSNGI+PMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKMAGGIGLNVHRIRATGSYIAGTNGTSNGIIPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+FEFLDLRKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+L CPNE PGLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNGDWTLMCPNECPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EFE LY KYE+EGK ++ V+AQ LW+ IL++Q ETG P+ML+KD CNKKSNQ+NL
Sbjct: 361 DCYGEEFEALYEKYEREGKGRRTVRAQKLWYSILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++Y++P E AVCNLAS+ALP +V ++ RY
Sbjct: 421 GTIRSSNLCTEIVEYSAPDEVAVCNLASLALPAFVDY-----------------NEGRY- 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EVT +V NLNKIIDVNYYPV+ AR SN+RHRPIG+GVQGLAD F+ L MPF+S
Sbjct: 463 DFKKLHEVTQVVVRNLNKIIDVNYYPVQEARNSNMRHRPIGVGVQGLADAFLALRMPFES 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LNK IFETIY+ AL S E+A +GPY T+ GSP S+GILQ DMW V PSD W+W
Sbjct: 523 PEARELNKQIFETIYHAALTASMELAKEQGPYSTFKGSPASEGILQFDMWNVTPSDLWEW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I ++G+RNSLL+APMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 DTLKQQIKEHGIRNSLLLAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL +MGLWS +KN+II ++GS+Q IP IP ++KA+YKTVWEI Q+ +V MA DRG +
Sbjct: 643 LKDLVDMGLWSDAMKNRIIAENGSIQNIPNIPADIKALYKTVWEISQRQVVQMAADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
ID SQSLNIHM P+ GK+TS+HF W GLKTGMYYLR++AAA I+FTVD L
Sbjct: 703 IDQSQSLNIHMKDPSMGKITSMHFAGWKLGLKTGMYYLRTQAAAAPIQFTVDQEAL 758
>gi|410915398|ref|XP_003971174.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
isoform 1 [Takifugu rubripes]
Length = 792
Score = 1128 bits (2918), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 536/811 (66%), Positives = 651/811 (80%), Gaps = 22/811 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG+QEAV FDKIT R++KL YGL+ E DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQEAVSFDKITFRVQKLCYGLNSEFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT +PDYA LAARI VSNLHK TKK FS+ ++D+YN+ N + +P+I+ +
Sbjct: 61 AETAATLTTKYPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYVNPLNKQHSPMISKET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI+++N RL+S IIYDRDF Y++FGFKTLERSYLLK GKV ERPQHMLMRVAVGIH+
Sbjct: 121 LDIVLENKDRLNSAIIYDRDFSYNFFGFKTLERSYLLKTNGKVAERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI++AI+TY+++S++WFTHASPTLFNAGT + QLSSCFL+ M++DSIEGIYDTL +CA+
Sbjct: 181 ADIEAAIETYNLLSEKWFTHASPTLFNAGTRKPQLSSCFLLAMREDSIEGIYDTLTQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
+SKSAGGIG++V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFAVY
Sbjct: 241 VSKSAGGIGLAVSCIRATGSYIAGTNGRSNGLVPMLRVYNNTARYVDQGGNKRPGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+D+F FL+L+KN GKEE RARDLF+ALW+PDLFM+RV+SN WSL CP+E PGL
Sbjct: 301 LEPWHSDVFAFLELKKNTGKEEQRARDLFFALWIPDLFMKRVESNQDWSLMCPSECPGLI 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DCWG EFE LYT+YEKEG+AK+VV+AQ LW+ I++SQ ETGTPYML+KD CN+KSNQQNL
Sbjct: 361 DCWGEEFEELYTRYEKEGRAKRVVKAQQLWYAIIESQTETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+++YTS E AVCNLASIAL YV + R +
Sbjct: 421 GTIKSSNLCTEIVEYTSKDEVAVCNLASIALNMYV-------------------TPQRTY 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KLA VT I+ NLNKIID+NYYPV ARRSN+RHRPIGIGVQGLAD FIL+ P++S
Sbjct: 462 DFNKLASVTKIIVRNLNKIIDINYYPVPEARRSNMRHRPIGIGVQGLADAFILMRHPYES 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LN IFETIYY AL S E+AA GPYETY GSPVSKG+LQ DMWG P+D WDW
Sbjct: 522 PEAQLLNIQIFETIYYAALEASCELAAEFGPYETYAGSPVSKGVLQYDMWGKTPTDLWDW 581
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K+GVRNSLL+APMPTAST+QILGNNE E YTSNIY+RRVLSGEF +VN HL
Sbjct: 582 NALKEKIAKHGVRNSLLLAPMPTASTAQILGNNESIEAYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE GLWS +KN++I +GS+Q I +IP++LK +YKTVWEI QKT++ MA DRG Y
Sbjct: 642 LKDLTERGLWSDAMKNQLIAHNGSIQDIQEIPDDLKQLYKTVWEISQKTVLKMAADRGAY 701
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +P +GKLTS+HF+ W GLKTGMYYLR++ AA+ I+FT++ LKE
Sbjct: 702 IDQSQSLNIHIAEPTYGKLTSMHFYGWKLGLKTGMYYLRTKPAANPIQFTLNREKLKEAQ 761
Query: 781 KVTDDDDAK---MAQMVCSLTNREECMACGS 808
++AK MA MVCSL N++ECM GS
Sbjct: 762 SAKSKEEAKERNMAAMVCSLANKDECMMYGS 792
>gi|452004087|gb|EMD96543.1| hypothetical protein COCHEDRAFT_1220161 [Cochliobolus
heterostrophus C5]
Length = 897
Score = 1128 bits (2918), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/777 (66%), Positives = 626/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG++E V FDKITAR+ +L YGL +H DP ++ KV +GVY+GV T+QLD+LA
Sbjct: 1 MFVFKRDGRKERVQFDKITARVSRLCYGLDPDHVDPAAITMKVISGVYQGVNTTQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA LAARI VSNLHK TKK FS + D+YN+ N ++G P+I+D V
Sbjct: 61 AETAAYMTTTHPDYAILAARIAVSNLHKQTKKQFSAVVADLYNYVNPKNGKHQPMISDSV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y +I +A L+S I+YDRDF+Y +FGFKTLERSYLL++ GKV ERPQHMLMRVAVGIH
Sbjct: 121 YKVIQDHAEELNSAIVYDRDFNYQFFGFKTLERSYLLRIDGKVAERPQHMLMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI+ AI+TY MSQ++FTHASPTLFNAGTP Q+SSCFL+ MK+DSI+GIYDTLK CA+
Sbjct: 181 EDIEKAIETYDYMSQKYFTHASPTLFNAGTPSPQMSSCFLIDMKEDSIDGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATGSYI GTNGTSNG++PMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIGGTNGTSNGLIPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+F FLDLRKNHGKEE RARDLFYALW+PDLFM+RVQ NG W+L CPNE PGLA
Sbjct: 301 LEPWHADVFGFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVQENGEWTLMCPNECPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LY YEK+ K ++ V+AQ LW+ IL++Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DVYGDEFEALYESYEKQNKGRETVRAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++YT+P E AVCNLAS+ALP +V K F
Sbjct: 421 GTIRSSNLCTEIVEYTAPDEVAVCNLASLALPSFV------------------DYKRGEF 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EVT +VT NLNKII+VN+YPVE ARRSN RHRPIG+GVQGLAD F+ L +PF+S
Sbjct: 463 DFQKLHEVTQVVTRNLNKIIEVNHYPVEEARRSNFRHRPIGMGVQGLADAFLALRLPFES 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LN IFETIY+ AL +S +IA GPYETY GSPVS+GILQ DMW V P+D WDW
Sbjct: 523 AEAKKLNIQIFETIYHAALTSSCDIAKELGPYETYEGSPVSQGILQYDMWNVTPTDLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+++GVRNSLL+APMPTASTSQILGNNECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 AELKAKIAQHGVRNSLLIAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL +MGLWS +KN+II + GS+ +IP IPEE K +YKTVWEI Q+T++ MA DRG +
Sbjct: 643 LKDLVDMGLWSENMKNRIIAEGGSIARIPNIPEETKTLYKTVWEISQRTIIQMAADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
ID SQSLNIHM +P GK+TS+HF W GLKTGMYYLR+ AA+ I+FTVD LK
Sbjct: 703 IDQSQSLNIHMKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEALK 759
>gi|396462063|ref|XP_003835643.1| similar to ribonucleoside-diphosphate reductase subunit large
[Leptosphaeria maculans JN3]
gi|312212194|emb|CBX92278.1| similar to ribonucleoside-diphosphate reductase subunit large
[Leptosphaeria maculans JN3]
Length = 903
Score = 1127 bits (2916), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/777 (66%), Positives = 628/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG++E V FDKITAR+ +L YGL +H DP ++ KV +GVY+GVTT QLD+LA
Sbjct: 1 MFVFKRDGRKERVQFDKITARVSRLCYGLDPDHVDPAAITMKVISGVYQGVTTIQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA LAARI VSNLHK TKK FS + D+Y++ N ++G P+I+D V
Sbjct: 61 AETAAYMTTTHPDYAILAARIAVSNLHKQTKKQFSAVVHDLYSYVNPKNGKSQPMISDKV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y I+M +A L+S ++YDRDF+Y +FGFKTLERSYLL++ GKV ERPQHM+MRVAVGIH
Sbjct: 121 YKIVMAHADELNSAVVYDRDFNYQFFGFKTLERSYLLRINGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI+ AI+TY MSQ++FTHASPTLFNAGTP Q+SSCFL+ MK+DSI+GIYDTLK CA+
Sbjct: 181 EDIEKAIETYDYMSQKYFTHASPTLFNAGTPSPQMSSCFLIDMKEDSIDGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATGSYI GTNGTSNG++PMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIGGTNGTSNGLIPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+F FLDLRKNHGKEE RARDLFYALW+PDLFM+RVQ NG W+L CPNE PGLA
Sbjct: 301 LEPWHADVFGFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVQENGEWTLMCPNECPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LY YEK+GK ++ V+AQ LW+ IL++Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DVYGDEFEALYESYEKKGKGRETVRAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+I+YT+P E AVCNLAS+ALP +V K F
Sbjct: 421 GTIRSSNLCTEIIEYTAPDEVAVCNLASLALPSFV------------------DYKRGEF 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EVT +VT NLNKII+VN+YPVE ARRSN RHRPIG+GVQGLAD F+ L +PF+S
Sbjct: 463 DFKKLHEVTQVVTRNLNKIIEVNHYPVEEARRSNFRHRPIGMGVQGLADAFLALRLPFES 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LN IFETIY+ AL +S +IA GPYETY GSPVS+GILQ DMW V P+D WDW
Sbjct: 523 PEAKKLNIQIFETIYHAALTSSCDIAKELGPYETYAGSPVSQGILQYDMWNVTPTDLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I++ GVRNSLL+APMPTASTSQILGNNECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 AALKEKIAQYGVRNSLLIAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL +MGLWS +KN+II + GS+ +IP IPEE K +YKTVWEI Q+T++ MA DRG +
Sbjct: 643 LKDLVDMGLWSENMKNRIIAEGGSIARIPNIPEETKTLYKTVWEISQRTIIQMAADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
ID SQSLNIHM +P GK+TS+HF W GLKTGMYYLR+ AA+ I+FTVD L+
Sbjct: 703 IDQSQSLNIHMKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEALQ 759
>gi|83769274|dbj|BAE59411.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 794
Score = 1127 bits (2915), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/810 (65%), Positives = 645/810 (79%), Gaps = 22/810 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG++E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA LAARI VSNLHK TKK FS I D+Y++ N ++ AP+I+ +
Sbjct: 61 AETAAYMTTTHPDYAILAARIAVSNLHKQTKKQFSLVISDLYHYINPKNKKPAPMISKET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+I+MK+A L+S I+YDRDF+Y++FGFKTLERSYLL++ GKV ERPQH+LMRV+VGIH
Sbjct: 121 YEIVMKHADELNSAIVYDRDFNYNFFGFKTLERSYLLRIDGKVAERPQHLLMRVSVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI+ AI+TYH+MSQ++FTHASPTLFNAGTP+ QL+SCFLV MK+DSIEGIYDTLK CA+
Sbjct: 181 NDIEKAIETYHLMSQKYFTHASPTLFNAGTPQPQLASCFLVDMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATGSYI GTNG+SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIGGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+FEFLDLRKNHGKEE RARDLFYALW PDLFM+RV++NG W+LFCPNEAPGLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFYALWTPDLFMKRVEANGDWTLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LY +YEKEG+ +K ++AQ LW+ IL++Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DVYGDEFEALYERYEKEGRGRKTIKAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+I+YT+P E AVCNLAS+ALP +V +RG +
Sbjct: 421 GTIRSSNLCTEIIEYTAPDEVAVCNLASLALPTFVD--------------AARGE----Y 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL EV ++ NLNKIID+NYYPV A+ SN+RHRPI +GV GLAD F+ L +PFDS
Sbjct: 463 DFGKLHEVVQVLVRNLNKIIDINYYPVPEAKNSNMRHRPIALGVNGLADAFLALRLPFDS 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+QLN IFETIY+ AL SS++A G YE+Y GSPVS+GILQ DMW P+D WDW
Sbjct: 523 PEAKQLNTQIFETIYHGALTASSDLAKDFGTYESYEGSPVSQGILQYDMWDRTPTDLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I++ GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 DALKAKIAQTGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++GLWS +KN+II + GSVQ IP IP ++KA+YKTVWEI Q++++ MA DRG Y
Sbjct: 643 LKDLVDLGLWSDNMKNRIIAEGGSVQNIPNIPADIKALYKTVWEISQRSILQMAADRGAY 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK--- 777
ID SQSLNIH+ +P GK+TS+HF W GLKTGMYYLR+ AA+ I+FTVD LK
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFAGWKMGLKTGMYYLRTMAASAPIQFTVDQEALKVAD 762
Query: 778 ENPKVTDDDDAKMAQMV-CSLTNREECMAC 806
N + K A+++ CS+ N+E C+ C
Sbjct: 763 TNVARANASFRKRAKVLQCSIENKEACLMC 792
>gi|302689939|ref|XP_003034649.1| hypothetical protein SCHCODRAFT_75631 [Schizophyllum commune H4-8]
gi|300108344|gb|EFI99746.1| hypothetical protein SCHCODRAFT_75631 [Schizophyllum commune H4-8]
Length = 892
Score = 1127 bits (2914), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/800 (65%), Positives = 641/800 (80%), Gaps = 20/800 (2%)
Query: 2 YVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAA 61
YV KR ++E + KI +R+KKL YGL + H DP+ ++ KV GVY GVTT +LD LAA
Sbjct: 5 YVFKRGTRKEQIQLGKIQSRIKKLCYGLDMRHVDPLAITIKVVQGVYHGVTTVELDNLAA 64
Query: 62 ETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVY 121
ETAA +TT HPDYA LAARI +SNLHK T KSFS+ ++ +YN+ N ++G +A +I+D Y
Sbjct: 65 ETAAYLTTQHPDYAVLAARIAISNLHKETTKSFSQVVEKLYNYVNPKNGKRASMISDATY 124
Query: 122 DIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKD 181
++M NA LDS IIYDRDF Y+YFGFKTLERSYLL++ G+V ERPQHM+MRVAVGIH D
Sbjct: 125 KVVMDNAETLDSAIIYDRDFAYNYFGFKTLERSYLLRINGRVAERPQHMIMRVAVGIHGD 184
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAII 241
+I+ ++TY++MS R+FTHASPTLFNAGTP Q+SSCFLV MKDDSIEGIYDTLK+CA+I
Sbjct: 185 NIERVLETYNLMSDRYFTHASPTLFNAGTPHPQMSSCFLVSMKDDSIEGIYDTLKQCAMI 244
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SK+AGGIG+++HNIRATGSYI GTNG SNGIVPMLR ++ TARYVDQGG KR GAFA+YL
Sbjct: 245 SKTAGGIGLNIHNIRATGSYIAGTNGYSNGIVPMLRAYDATARYVDQGGNKRPGAFAIYL 304
Query: 302 EPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLAD 361
EPWH D+FEFLDLRKNHGKEE RARDLFYALW+PDLFM+RV+S G WSLFCPNEAPGLAD
Sbjct: 305 EPWHPDVFEFLDLRKNHGKEEQRARDLFYALWIPDLFMKRVESGGDWSLFCPNEAPGLAD 364
Query: 362 CWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG 421
CWG EFE LY KYE EG+ +K + AQ LW+ IL++QIETG P+ML+KD+ N+KSNQQNLG
Sbjct: 365 CWGDEFEALYAKYEAEGRERKKIPAQKLWYAILEAQIETGNPFMLYKDSANRKSNQQNLG 424
Query: 422 TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFD 481
TIKSSNLCTE+I+Y++P ETAVCNLAS+ALP ++R+ GV +D
Sbjct: 425 TIKSSNLCTEIIEYSAPDETAVCNLASLALPTFIRD-GV-------------------YD 464
Query: 482 FEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDST 541
F+KL +VT +VT NLNKIIDVNYYPV ARRSN+RHRPIG+GVQGLAD F+ L MPFDS
Sbjct: 465 FQKLHDVTKVVTRNLNKIIDVNYYPVPEARRSNMRHRPIGLGVQGLADAFMALRMPFDSP 524
Query: 542 EAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWG 601
EA++LNK IFETIY+ A SS++A EGPYET+ GSP S+G LQ D+WGV PSD WDW
Sbjct: 525 EARELNKQIFETIYHAACEASSDLAEEEGPYETWEGSPASQGQLQFDLWGVTPSDLWDWA 584
Query: 602 GLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
L+ I++ G+RN+LLVAPMPTASTSQILGNNECFEPYTSNIY+RRVL+GEF VV LL
Sbjct: 585 SLKAKIARTGMRNALLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLAGEFQVVCPWLL 644
Query: 662 HDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYI 721
+L + GLW +KN+II ++GS+Q I +IP+++KAIYKTVWEI QK ++D+A DRG +I
Sbjct: 645 RELVDKGLWDDKMKNQIIANNGSIQSIARIPDDIKAIYKTVWEISQKKVLDLAADRGPFI 704
Query: 722 DHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPK 781
SQSLN+H+ P G+LTS+HF+ W +GLKTGMYYLR+R A+ AI+FTVD ++LKE+ K
Sbjct: 705 CQSQSLNVHLAAPTLGQLTSMHFYGWKKGLKTGMYYLRTRPASQAIQFTVDQAMLKESNK 764
Query: 782 VTDDDDAKMAQMVCSLTNRE 801
+ A+ V + T R+
Sbjct: 765 AEGEVAGAPARPVVATTPRK 784
>gi|341039005|gb|EGS23997.1| hypothetical protein CTHT_0007080 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 910
Score = 1127 bits (2914), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/777 (67%), Positives = 627/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG+QE V FDKITAR+ +L YGL + H DPV ++QKV GVY GVTT+QLD+LA
Sbjct: 1 MYVRKRDGRQERVQFDKITARVSRLCYGLDMNHVDPVAITQKVIAGVYPGVTTAQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK +S I D+Y++ N ++G P+I+ +
Sbjct: 61 AETAAYMTVTHPDYAVLAARIAVSNLHKQTKKQWSAVIHDLYHYVNPKNGKPCPMISKET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+ +M++ DS I+YDRDF+Y YFGFKTLERSYLLK+ GK+VERPQHM+MRVAVGI
Sbjct: 121 YECVMRHKDEFDSAIVYDRDFNYQYFGFKTLERSYLLKIDGKIVERPQHMIMRVAVGIWG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D+++ I+TY++MS ++FTHASPTLFNAGTP+ QLSSCFLV MK+DSIEGIYDTLK CA+
Sbjct: 181 DNVERVIETYNLMSMKFFTHASPTLFNAGTPQPQLSSCFLVDMKEDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+++H IRATGSYI GTNGTSNGI+PMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKMAGGIGLNIHRIRATGSYIAGTNGTSNGIIPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+FEFLDLRKNHGKEE RARDLF ALW+PDLFM+RV+ N W+L CPNE PGLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNQDWTLMCPNECPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EFE LY KYE+EG+ ++ V+AQ LW+ IL++Q+ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DCYGEEFEALYEKYEREGRGRRTVKAQKLWYHILEAQVETGNPFMLYKDHCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+ SNLCTE+I+Y +P E AVCNLAS+ALP +V ++ RY
Sbjct: 421 GTIRCSNLCTEIIEYCAPDEVAVCNLASLALPAFVDY-----------------NEGRY- 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EVT +V NLN+IID+N+YPV AR+SNLRHRPIG+GVQGLAD F+ L MPF+S
Sbjct: 463 DFQKLHEVTQVVVRNLNRIIDINHYPVPEARKSNLRHRPIGVGVQGLADAFLALRMPFES 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LNK IFETIY+ AL S +IA EGPYETY GSPVS+GILQ DMWGV PS WDW
Sbjct: 523 PEARELNKQIFETIYHAALTASCDIAKEEGPYETYEGSPVSQGILQYDMWGVTPSPLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I K GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 ESLKAKIKKYGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL E+GLWS +KN+II + GS+Q IP IP ++KA+YKTVWEI QKT+V MA DRG +
Sbjct: 643 LKDLVELGLWSDNMKNRIIAEGGSIQNIPNIPADIKALYKTVWEISQKTIVQMAADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
ID SQSLNIHM +P GK+TS+HF W GLKTGMYYLR++AAA I+FTVD L+
Sbjct: 703 IDQSQSLNIHMREPTMGKITSMHFTGWKLGLKTGMYYLRTQAAAQPIQFTVDQEALR 759
>gi|322704073|gb|EFY95672.1| ribonucleoside-diphosphate reductase large chain [Metarhizium
anisopliae ARSEF 23]
Length = 905
Score = 1127 bits (2914), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/777 (67%), Positives = 629/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG+QE V FDKITAR+ +L YGL EH DPV ++QKV +GVY GVTT QLD+LA
Sbjct: 1 MFVRKRDGRQERVQFDKITARVSRLCYGLDTEHVDPVAITQKVISGVYGGVTTVQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK +S + D+Y++ N ++ +P+I+ D
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSSVVSDLYHYVNPKNERASPMISKDT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+ +M++ LDS I+YDRDF+Y YFGFKTLERSYLLK+ GK+VERPQHM+MRVAVGI
Sbjct: 121 YECVMRHKDELDSAIVYDRDFNYQYFGFKTLERSYLLKLNGKIVERPQHMIMRVAVGIWG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D+I+ I+TY++MS ++FTHASPTLFNAGTP+AQLSSCFLV MKDDSI+GIYDTLK CA+
Sbjct: 181 DNIERVIETYNLMSSKFFTHASPTLFNAGTPQAQLSSCFLVDMKDDSIDGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG++VH IRATGSYI GTNGTSNGI+PMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKMAGGIGLNVHRIRATGSYIAGTNGTSNGIIPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+FEFLDLRKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+L CPNE PGLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNGDWTLMCPNECPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EFE LY KYE+EGK ++ ++AQ LW+ IL++Q ETG P+ML+KD CNKKSNQ+NL
Sbjct: 361 DCYGEEFEALYEKYEREGKGRRTIRAQKLWYSILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++Y++P E AVCNLAS+ALP +V + RY
Sbjct: 421 GTIRSSNLCTEIVEYSAPDEVAVCNLASLALPAFVDY-----------------DEGRY- 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EVT +V NLNKIIDVN+YPV+ AR SN+RHRPIG+GVQGLAD F+ L MPF+S
Sbjct: 463 DFKKLHEVTQVVVRNLNKIIDVNHYPVQEARNSNMRHRPIGVGVQGLADAFLALRMPFES 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LNK IFETIY+ AL S E+A +GPY T+ GSP S+GILQ DMW V PSD W+W
Sbjct: 523 PEARELNKQIFETIYHAALTASMELAKEQGPYSTFKGSPASEGILQFDMWNVTPSDLWEW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I ++G+RNSLL+APMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 DTLKQQIKEHGIRNSLLLAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL +MGLWS +KN+II ++GS+Q IP IP ++KA+YKTVWEI Q+ +V MA DRG +
Sbjct: 643 LKDLVDMGLWSDAMKNRIIAENGSIQNIPNIPADIKALYKTVWEISQRQVVQMAADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
ID SQSLNIHM P+ GK+TS+HF W GLKTGMYYLR++AAA I+FTVD LK
Sbjct: 703 IDQSQSLNIHMKDPSMGKITSMHFAGWKLGLKTGMYYLRTQAAAAPIQFTVDQEALK 759
>gi|346979155|gb|EGY22607.1| ribonucleoside-diphosphate reductase large chain [Verticillium
dahliae VdLs.17]
Length = 903
Score = 1127 bits (2914), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/777 (66%), Positives = 626/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG+QE V FDKITAR+ +L YGL ++H DPV ++QKV +GVY GVTT QLD+LA
Sbjct: 1 MFVRKRDGRQERVQFDKITARVSRLCYGLDMDHVDPVAITQKVISGVYGGVTTVQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK +S + D+Y++ N ++ +P+IA +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSSVVSDLYHYVNPKNNRPSPMIAPET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+ +MK+ LDS I+YDRDF+Y YFGFKTLERSYLLK+ GK+ ERPQHM+MRV+VGI
Sbjct: 121 YEFVMKHKEELDSAIVYDRDFNYQYFGFKTLERSYLLKLDGKIAERPQHMIMRVSVGIWG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D+++ I+TY++MS ++FTHASPTLFNAGTP+AQLSSCFLV MKDDSIEGIYDTLK CA+
Sbjct: 181 DNVERVIETYNLMSSKFFTHASPTLFNAGTPQAQLSSCFLVDMKDDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG++VH IRATGSYI GTNGTSNGI PMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKMAGGIGLNVHRIRATGSYIAGTNGTSNGITPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+FEFLDLRKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+L CPNE PGLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNGDWTLMCPNECPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EFE LY KYEK GK +K ++AQ LW+ +L++Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DCYGDEFEALYEKYEKAGKGRKTIKAQKLWYAVLEAQTETGNPFMLYKDHCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++Y++P E AVCNLAS+ALP YV N +
Sbjct: 421 GTIRSSNLCTEIVEYSAPDEVAVCNLASLALPAYV------------------DYNNGVY 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL +VT +V NLN+IIDVN+YPV AR SN+RHRPIG+GVQGLAD F+ L MPF+S
Sbjct: 463 DFKKLHQVTQVVVRNLNRIIDVNHYPVIEARNSNMRHRPIGLGVQGLADAFLALRMPFES 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LNK IFETIY+ AL S ++A EGPY TY GSPVS+GILQ DMW V P+D WDW
Sbjct: 523 PEAKELNKQIFETIYHAALTMSCKLAQEEGPYSTYEGSPVSQGILQYDMWNVKPTDLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I ++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 ADLKSQIKQHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL +MGLWS +KN+II ++GS+Q IP IP ++K++YKTVWEI Q+T+V MA DRG +
Sbjct: 643 LKDLVDMGLWSDSMKNRIIAENGSIQNIPNIPADIKSLYKTVWEISQRTVVQMAADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
ID SQSLNIHM P GK+TS+HF W GLKTGMYYLR++AAA I+FTVD LK
Sbjct: 703 IDQSQSLNIHMKDPTMGKITSMHFAGWKLGLKTGMYYLRTQAAAAPIQFTVDKEALK 759
>gi|451855061|gb|EMD68353.1| hypothetical protein COCSADRAFT_33284 [Cochliobolus sativus ND90Pr]
Length = 897
Score = 1127 bits (2914), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/777 (67%), Positives = 626/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG++E V FDKITAR+ +L YGL +H DP ++ KV +GVY+GV T+QLD+LA
Sbjct: 1 MFVFKRDGRKERVQFDKITARVSRLCYGLDPDHVDPAAITMKVISGVYQGVNTTQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA LAARI VSNLHK TKK FS + D+YN+ N ++G P+I+D V
Sbjct: 61 AETAAYMTTTHPDYAILAARIAVSNLHKQTKKQFSAVVADLYNYVNPKNGKHQPMISDFV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y II +A L+S I+YDRDF+Y +FGFKTLERSYLL++ GKV ERPQHMLMRVAVGIH
Sbjct: 121 YKIIQDHAEELNSAIVYDRDFNYQFFGFKTLERSYLLRIDGKVAERPQHMLMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI+ AI+TY MSQ++FTHASPTLFNAGTP Q+SSCFL+ MK+DSI+GIYDTLK CA+
Sbjct: 181 EDIEKAIETYDYMSQKYFTHASPTLFNAGTPSPQMSSCFLIDMKEDSIDGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATGSYI GTNGTSNG++PMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIGGTNGTSNGLIPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+F FLDLRKNHGKEE RARDLFYALW+PDLFM+RVQ NG W+L CPNE PGLA
Sbjct: 301 LEPWHADVFGFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVQENGEWTLMCPNECPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LY YEK+ K ++ V+AQ LW+ IL++Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DVYGDEFEALYESYEKQNKGRETVRAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++YT+P E AVCNLAS+ALP +V K F
Sbjct: 421 GTIRSSNLCTEIVEYTAPDEVAVCNLASLALPSFV------------------DYKRGEF 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EVT +VT NLNKII+VN+YPVE ARRSN RHRPIG+GVQGLAD F+ L +PF+S
Sbjct: 463 DFQKLHEVTQVVTRNLNKIIEVNHYPVEEARRSNFRHRPIGMGVQGLADAFLALRLPFES 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LN IFETIY+ AL +S +IA GPYETY GSPVS+GILQ DMW V P+D WDW
Sbjct: 523 AEAKKLNIQIFETIYHAALTSSCDIAKELGPYETYEGSPVSQGILQYDMWNVTPTDLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+++GVRNSLL+APMPTASTSQILGNNECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 AELKAKIAQHGVRNSLLIAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL +MGLWS +KN+II + GS+ +IP IPEE K +YKTVWEI Q+T++ MA DRG +
Sbjct: 643 LKDLVDMGLWSENMKNRIIAEGGSIARIPNIPEETKTLYKTVWEISQRTIIQMAADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
ID SQSLNIHM +P GK+TS+HF W GLKTGMYYLR+ AA+ I+FTVD LK
Sbjct: 703 IDQSQSLNIHMKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEALK 759
>gi|302418985|ref|XP_003007323.1| ribonucleoside-diphosphate reductase large chain [Verticillium
albo-atrum VaMs.102]
gi|261352974|gb|EEY15402.1| ribonucleoside-diphosphate reductase large chain [Verticillium
albo-atrum VaMs.102]
Length = 903
Score = 1126 bits (2913), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/777 (66%), Positives = 626/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG+QE V FDKITAR+ +L YGL ++H DPV ++QKV +GVY GVTT QLD+LA
Sbjct: 1 MFVRKRDGRQERVQFDKITARVSRLCYGLDMDHVDPVAITQKVISGVYGGVTTVQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK +S + D+Y++ N ++ +P+IA +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSSVVSDLYHYVNPKNNRPSPMIAPET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+ +MK+ LDS I+YDRDF+Y YFGFKTLERSYLLK+ GK+ ERPQHM+MRV+VGI
Sbjct: 121 YEFVMKHKEELDSAIVYDRDFNYQYFGFKTLERSYLLKLDGKIAERPQHMIMRVSVGIWG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D+++ I+TY++MS ++FTHASPTLFNAGTP+AQLSSCFLV MKDDSIEGIYDTLK CA+
Sbjct: 181 DNVERVIETYNLMSSKFFTHASPTLFNAGTPQAQLSSCFLVDMKDDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG++VH IRATGSYI GTNGTSNGI PMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKMAGGIGLNVHRIRATGSYIAGTNGTSNGITPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+FEFLDLRKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+L CPNE PGLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNGDWTLMCPNECPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EFE LY KYEK GK +K ++AQ LW+ +L++Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DCYGDEFEALYEKYEKAGKGRKTIKAQKLWYAVLEAQTETGNPFMLYKDHCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++Y++P E AVCNLAS+ALP YV N +
Sbjct: 421 GTIRSSNLCTEIVEYSAPDEVAVCNLASLALPAYV------------------DYNNGVY 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL +VT +V NLN+IIDVN+YPV AR SN+RHRPIG+GVQGLAD F+ L MPF+S
Sbjct: 463 DFKKLHQVTQVVVRNLNRIIDVNHYPVIEARNSNMRHRPIGLGVQGLADAFLALRMPFES 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LNK IFETIY+ AL S ++A EGPY TY GSPVS+GILQ DMW V P+D WDW
Sbjct: 523 PEAKELNKQIFETIYHAALTMSCKLAQEEGPYSTYEGSPVSQGILQYDMWNVKPTDLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I ++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 ADLKSQIKQHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL +MGLWS +KN+II ++GS+Q IP IP ++K++YKTVWEI Q+T+V MA DRG +
Sbjct: 643 LKDLVDMGLWSDSMKNRIIAENGSIQNIPNIPADIKSLYKTVWEISQRTVVQMAADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
ID SQSLNIHM P GK+TS+HF W GLKTGMYYLR++AAA I+FTVD LK
Sbjct: 703 IDQSQSLNIHMKDPTMGKITSMHFAGWKLGLKTGMYYLRTQAAAAPIQFTVDKEALK 759
>gi|200765|gb|AAA40061.1| ribonucleotide reductase subunit M1 [Mus musculus]
Length = 792
Score = 1126 bits (2912), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/811 (66%), Positives = 651/811 (80%), Gaps = 22/811 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG+QE V FDKIT+R++KL YGL+++ DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT HPDYA LAARI VSNLHK TKK FS+ ++D+YN+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGRHSPMVASST 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI+M N RL+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRV+VGIHK
Sbjct: 121 LDIVMANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+AI+TY+++S++WFTHA PTLFNAGT R QLSSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSEKWFTHAPPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV++N WSL CPNE PGL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE+LY YEK+G+ +KVV+AQ LW+ I++SQ ETGTPYML+KD+CN+KSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YTS E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TPEHTY 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DFEKLAEVT ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FIL+ PF+S
Sbjct: 462 DFEKLAEVTKVIVRNLNKIIDINYYPIPEAHLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S E+A GPYETY GSPVSKGILQ DMW V P+D WDW
Sbjct: 522 PEAQLLNKQIFETIYYGALEASCELAKEYGPYETYEGSPVSKGILQYDMWNVAPTDLWDW 581
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 KPLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE GLW+ +KN+II +GS+Q IP+IP++LK +YKTVWEI QKT++ MA +RG +
Sbjct: 642 LKDLTERGLWNEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR+R AA+ I+FT++ LK+
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 KVTDDDDA---KMAQMVCSLTNREECMACGS 808
K +++ A MVCSL NREEC+ CGS
Sbjct: 762 KALKEEEEKERNTAAMVCSLENREECLMCGS 792
>gi|4506749|ref|NP_001024.1| ribonucleoside-diphosphate reductase large subunit [Homo sapiens]
gi|132608|sp|P23921.1|RIR1_HUMAN RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleoside-diphosphate reductase
subunit M1; AltName: Full=Ribonucleotide reductase large
subunit
gi|323714413|pdb|3HNC|A Chain A, Crystal Structure Of Human Ribonucleotide Reductase 1
Bound To The Effector Ttp
gi|323714414|pdb|3HNC|B Chain B, Crystal Structure Of Human Ribonucleotide Reductase 1
Bound To The Effector Ttp
gi|323714415|pdb|3HND|A Chain A, Crystal Structure Of Human Ribonucleotide Reductase 1
Bound To The Effector Ttp And Substrate Gdp
gi|323714416|pdb|3HND|B Chain B, Crystal Structure Of Human Ribonucleotide Reductase 1
Bound To The Effector Ttp And Substrate Gdp
gi|323714417|pdb|3HNE|A Chain A, Crystal Structure Of Human Ribonucleotide Reductase 1
Bound To The Effectors Ttp And Atp
gi|323714418|pdb|3HNE|B Chain B, Crystal Structure Of Human Ribonucleotide Reductase 1
Bound To The Effectors Ttp And Atp
gi|323714419|pdb|3HNF|A Chain A, Crystal Structure Of Human Ribonucleotide Reductase 1
Bound To The Effectors Ttp And Datp
gi|323714420|pdb|3HNF|B Chain B, Crystal Structure Of Human Ribonucleotide Reductase 1
Bound To The Effectors Ttp And Datp
gi|36065|emb|CAA42118.1| M1 subunit of ribonucleotide reductase [Homo sapiens]
gi|36153|emb|CAA42180.1| large subunit ribonucleotide reductase [Homo sapiens]
gi|13676332|gb|AAH06498.1| Ribonucleotide reductase M1 [Homo sapiens]
gi|119622988|gb|EAX02583.1| ribonucleotide reductase M1 polypeptide [Homo sapiens]
gi|123991808|gb|ABM83954.1| ribonucleotide reductase M1 polypeptide [synthetic construct]
gi|123999422|gb|ABM87271.1| ribonucleotide reductase M1 polypeptide [synthetic construct]
Length = 792
Score = 1125 bits (2911), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 539/811 (66%), Positives = 654/811 (80%), Gaps = 22/811 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG+QE V FDKIT+R++KL YGL+++ DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT HPDYA LAARI VSNLHK TKK FS+ ++D+YN+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKST 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI++ N RL+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRV+VGIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+AI+TY+++S+RWFTHASPTLFNAGT R QLSSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV++N WSL CPNE PGL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE+LY YEK+G+ +KVV+AQ LW+ I++SQ ETGTPYML+KD+CN+KSNQQNL
Sbjct: 361 EVWGEEFEKLYASYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YTS E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLAEVT +V NLNKIID+NYYPV A SN RHRPIGIGVQGLAD FIL+ PF+S
Sbjct: 462 DFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S ++A +GPYETY GSPVSKGILQ DMW V P+D WDW
Sbjct: 522 AEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 KVLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE GLW +KN+II +GS+Q IP+IP++LK +YKTVWEI QKT++ MA +RG +
Sbjct: 642 LKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR+R AA+ I+FT++ LK+
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 KVTDDDDA---KMAQMVCSLTNREECMACGS 808
KV+ +++ A MVCSL NR+EC+ CGS
Sbjct: 762 KVSKEEEEKERNTAAMVCSLENRDECLMCGS 792
>gi|367054108|ref|XP_003657432.1| hypothetical protein THITE_2123125 [Thielavia terrestris NRRL 8126]
gi|347004698|gb|AEO71096.1| hypothetical protein THITE_2123125 [Thielavia terrestris NRRL 8126]
Length = 912
Score = 1125 bits (2911), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/778 (67%), Positives = 631/778 (81%), Gaps = 20/778 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG+QE V FDKITAR+ +L YGL ++H DPV ++QKV +GVY GVTT+QLD+LA
Sbjct: 1 MYVRKRDGRQERVQFDKITARVSRLCYGLDMDHVDPVAITQKVISGVYGGVTTAQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK +S + D+Y++ N ++G +P+I+ +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSAVVSDLYHYVNPKNGRPSPMISKET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+ +M++ LDS I+YDRDF+Y YFGFKTLERSYLL++ GK+VERPQHM+MRVAVGI
Sbjct: 121 YECVMRHKDELDSAIVYDRDFNYQYFGFKTLERSYLLRLDGKIVERPQHMIMRVAVGIWG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D+I+ ++TY++MS ++FTHASPTLFNAGTP+AQLSSCFLV MKDDSIEGIYDTLK CA+
Sbjct: 181 DNIERVLETYNLMSNKFFTHASPTLFNAGTPQAQLSSCFLVDMKDDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+++H IRATGSYI GTNGTSNGI+PMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKMAGGIGLNIHRIRATGSYIAGTNGTSNGIIPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIFEFLDLRKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+L CPNE PGLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNGEWTLMCPNECPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EFE LY KYE+EG+ +K V+AQ LW+ IL++Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DCYGEEFEALYEKYEREGRGRKTVRAQKLWYAILEAQTETGNPFMLYKDHCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVR-EMGVPMESHPSKLVGSRGSKNRY 479
GTI+ SNLCTE+I+Y++P E AVCNLAS+ALP +V GV
Sbjct: 421 GTIRGSNLCTEIIEYSAPDEVAVCNLASLALPAFVDYNEGV------------------- 461
Query: 480 FDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFD 539
+DF+KL EVT +V NLN+IID+N+YPV+ A SN+RHRPIG+GVQGLADTF+ L MPF+
Sbjct: 462 YDFKKLHEVTQVVVRNLNRIIDINHYPVKEAYNSNMRHRPIGVGVQGLADTFLALRMPFE 521
Query: 540 STEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWD 599
S EA++LNK IFETIY+ AL S ++A EGPY TY GSPVS+GILQ DMW V PSD WD
Sbjct: 522 SPEARELNKQIFETIYHAALTASCKLAQEEGPYSTYEGSPVSQGILQYDMWNVKPSDLWD 581
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L+ I ++GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN
Sbjct: 582 WDALKAQIKEHGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPW 641
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL DL +MGLWS +KN+II GS+Q IP IP ++KA+YKTVWEI Q+T+V MA DRG
Sbjct: 642 LLKDLVDMGLWSDNMKNRIIAAGGSIQNIPNIPADIKALYKTVWEISQRTIVQMAADRGA 701
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
+ID SQSLNIHM +P GK+TS+HF W GLKTGMYYLR++AAA I+FTVD L+
Sbjct: 702 FIDQSQSLNIHMREPTMGKITSMHFTGWKLGLKTGMYYLRTQAAAQPIQFTVDQEALR 759
>gi|114635715|ref|XP_001160029.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
isoform 4 [Pan troglodytes]
gi|397465790|ref|XP_003804664.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
isoform 1 [Pan paniscus]
gi|410214658|gb|JAA04548.1| ribonucleotide reductase M1 [Pan troglodytes]
gi|410262940|gb|JAA19436.1| ribonucleotide reductase M1 [Pan troglodytes]
gi|410303308|gb|JAA30254.1| ribonucleotide reductase M1 [Pan troglodytes]
gi|410337287|gb|JAA37590.1| ribonucleotide reductase M1 [Pan troglodytes]
Length = 792
Score = 1125 bits (2911), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 539/811 (66%), Positives = 654/811 (80%), Gaps = 22/811 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG+QE V FDKIT+R++KL YGL+++ DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT HPDYA LAARI VSNLHK TKK FS+ ++D+YN+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKST 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI++ N RL+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRV+VGIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+AI+TY+++S+RWFTHASPTLFNAGT R QLSSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV++N WSL CPNE PGL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE+LY YEK+G+ +KVV+AQ LW+ I++SQ ETGTPYML+KD+CN+KSNQQNL
Sbjct: 361 EVWGEEFEKLYASYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YTS E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLAEVT +V NLNKIID+NYYPV A SN RHRPIGIGVQGLAD FIL+ PF+S
Sbjct: 462 DFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S ++A +GPYETY GSPVSKGILQ DMW V P+D WDW
Sbjct: 522 AEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 KLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE GLW +KN+II +GS+Q IP+IP++LK +YKTVWEI QKT++ MA +RG +
Sbjct: 642 LKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR+R AA+ I+FT++ LK+
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 KVTDDDDA---KMAQMVCSLTNREECMACGS 808
KV+ +++ A MVCSL NR+EC+ CGS
Sbjct: 762 KVSKEEEEKERNTAAMVCSLENRDECLMCGS 792
>gi|388454038|ref|NP_001252816.1| ribonucleoside-diphosphate reductase large subunit [Macaca mulatta]
gi|355566819|gb|EHH23198.1| Ribonucleoside-diphosphate reductase large subunit [Macaca mulatta]
gi|355752416|gb|EHH56536.1| Ribonucleoside-diphosphate reductase large subunit [Macaca
fascicularis]
gi|380815414|gb|AFE79581.1| ribonucleoside-diphosphate reductase large subunit [Macaca mulatta]
gi|383420603|gb|AFH33515.1| ribonucleoside-diphosphate reductase large subunit [Macaca mulatta]
Length = 792
Score = 1125 bits (2911), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/811 (66%), Positives = 654/811 (80%), Gaps = 22/811 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG+QE V FDKIT+R++KL YGL+++ DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT HPDYA LAARI VSNLHK TKK FS+ ++D+YN+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKST 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI++ N RL+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRV+VGIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+AI+TY+++S+RWFTHASPTLFNAGT R QLSSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV++N WSL CPNE PGL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE+LY YEK+G+ +KVV+AQ LW+ I++SQ ETGTPYML+KD+CN+KSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YTS E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLAEVT +V NLNKIID+NYYPV A SN RHRPIGIGVQGLAD FIL+ PF+S
Sbjct: 462 DFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S ++A +GPYETY GSPVSKGILQ DMW V P+D WDW
Sbjct: 522 AEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 NLLKENIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE GLW +KN+II +GS+Q IP+IP++LK +YKTVWEI QKT++ MA +RG +
Sbjct: 642 LKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR+R AA+ I+FT++ LK+
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 KVTDDDDA---KMAQMVCSLTNREECMACGS 808
K++ +++ A MVCSL NR+EC+ CGS
Sbjct: 762 KISKEEEEKERNTAAMVCSLENRDECLMCGS 792
>gi|332211477|ref|XP_003254845.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
isoform 1 [Nomascus leucogenys]
Length = 792
Score = 1125 bits (2909), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 539/811 (66%), Positives = 654/811 (80%), Gaps = 22/811 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG+QE V FDKIT+R++KL YGL+++ DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT HPDYA LAARI VSNLHK TKK FS+ ++D+YN+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKST 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI++ N RL+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRV+VGIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+AI+TY+++S+RWFTHASPTLFNAGT R QLSSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV++N WSL CPNE PGL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE+LY YEK+G+ +KVV+AQ LW+ I++SQ ETGTPYML+KD+CN+KSNQQNL
Sbjct: 361 EVWGEEFEKLYASYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YTS E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLAEVT +V NLNKIID+NYYPV A SN RHRPIGIGVQGLAD FIL+ PF+S
Sbjct: 462 DFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S ++A +GPYETY GSPVSKGILQ DMW V P+D WDW
Sbjct: 522 AEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 KLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE GLW +KN+II +GS+Q IP+IP++LK +YKTVWEI QKT++ MA +RG +
Sbjct: 642 LKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLRMAAERGAF 701
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR+R AA+ I+FT++ LK+
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 KVTDDDDA---KMAQMVCSLTNREECMACGS 808
KV+ +++ A MVCSL NR+EC+ CGS
Sbjct: 762 KVSKEEEEKERNTAAMVCSLENRDECLMCGS 792
>gi|429853065|gb|ELA28164.1| ribonucleoside-diphosphate reductase large chain [Colletotrichum
gloeosporioides Nara gc5]
Length = 898
Score = 1125 bits (2909), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/777 (67%), Positives = 627/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG+QE V FDKITAR+ +L YGL ++H DPV ++QKV +GVY GVTT QLD+LA
Sbjct: 1 MFVRKRDGRQERVQFDKITARVSRLCYGLDMDHVDPVAITQKVISGVYGGVTTVQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK +S + D+Y++ N ++G +P+IA +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSSVVSDLYHYVNPKNGRLSPMIAKET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YD +M++ LDS I+YDRDF+Y YFGFKTLERSYLLK+ GK+ ERPQHM+MRVAVGI
Sbjct: 121 YDCVMRHKEELDSAIVYDRDFNYQYFGFKTLERSYLLKLDGKIAERPQHMIMRVAVGIWG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD++ I+TY++MS + FTHASPTLFNAGTP+AQLSSCFLV MK+DSIEGIYDTLK CA+
Sbjct: 181 DDVERVIETYNLMSSKCFTHASPTLFNAGTPQAQLSSCFLVDMKEDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG++VH IRATGSYI GTNGTSNG+ PMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKMAGGIGLNVHRIRATGSYIAGTNGTSNGVTPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+FEFLDLRKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+L CPNE PGLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNGDWTLMCPNECPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EFE LY KYE+EGK +K ++AQ LW+ IL++Q ETG P+ML+KD N+KSNQ+NL
Sbjct: 361 DCYGEEFEALYEKYEREGKGRKTMKAQKLWYAILEAQTETGNPFMLYKDHANRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+I+Y++P E AVCNLAS+ALP +V + +
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASLALPSFV------------------NYSDGIY 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL +VT +V NLN+IIDVN+YPV AR SN+RHRPIG+GVQGLAD F+ L +PF+S
Sbjct: 463 DFQKLHDVTQVVVRNLNRIIDVNHYPVPEARNSNMRHRPIGLGVQGLADAFLALRLPFES 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LNK IFETIY+ AL S ++A EG Y +Y GSPVS+G+LQ DMWGV PSD WDW
Sbjct: 523 PEARELNKKIFETIYHAALTMSVQLAKEEGTYSSYEGSPVSQGVLQYDMWGVKPSDLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I ++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 DSLKEQIKQHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL +MGLWS +KN+II ++GSVQ IP IP E+KA+YKTVWEI Q+T+V MA DRG +
Sbjct: 643 LKDLVDMGLWSDAMKNRIIAENGSVQNIPNIPAEVKALYKTVWEISQRTVVQMAADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
ID SQSLNIHM P GK+TS+HF W GLKTGMYYLR++AAA I+FTVD LK
Sbjct: 703 IDQSQSLNIHMKDPTMGKITSMHFAGWKLGLKTGMYYLRTQAAAAPIQFTVDQEALK 759
>gi|61557388|ref|NP_001013254.1| ribonucleotide reductase M1 [Rattus norvegicus]
gi|55250768|gb|AAH85906.1| Ribonucleotide reductase M1 [Rattus norvegicus]
gi|149068638|gb|EDM18190.1| ribonucleotide reductase M1 (mapped), isoform CRA_b [Rattus
norvegicus]
Length = 792
Score = 1124 bits (2908), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 537/811 (66%), Positives = 652/811 (80%), Gaps = 22/811 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG+QE V FDKIT+R++KL YGL+++ DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT HPDYA LAARI VSNLHK TKK FS+ ++D+YN+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGRHSPMVASST 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+I+M + RL+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRV+VGIHK
Sbjct: 121 LEIVMAHKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+AI+TY+++S++WFTHASPTLFNAGT R QLSSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV++N WSL CPNE PGL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE+LY YEK+G+ +KVV+AQ LW+ I++SQ ETGTPYML+KD+CN+KSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YTS E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TPEHTY 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DFEKLAEVT ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FIL+ PF+S
Sbjct: 462 DFEKLAEVTKVIVRNLNKIIDINYYPIPEAHLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S ++A GPYETY GSPVSKGILQ DMW V P+D WDW
Sbjct: 522 PEAQLLNKQIFETIYYGALEASCDLAKEYGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 KLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE GLW+ +KN+II +GS+Q IP+IPE+LK +YKTVWEI QKT++ MA +RG +
Sbjct: 642 LKDLTERGLWNEEMKNQIIACNGSIQSIPEIPEDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR+R AA+ I+FT++ LK+
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 KVTDDDDA---KMAQMVCSLTNREECMACGS 808
K +++ A MVCSL NREEC+ CGS
Sbjct: 762 KALKEEEEKERNTAAMVCSLENREECLMCGS 792
>gi|330929115|ref|XP_003302526.1| hypothetical protein PTT_14367 [Pyrenophora teres f. teres 0-1]
gi|311322081|gb|EFQ89385.1| hypothetical protein PTT_14367 [Pyrenophora teres f. teres 0-1]
Length = 889
Score = 1124 bits (2907), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 525/789 (66%), Positives = 631/789 (79%), Gaps = 22/789 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG++E V FDKITAR+ +L YGL +H DP ++ KV +GVY+GVTT QLD+LA
Sbjct: 1 MFVFKRDGRKERVQFDKITARVSRLCYGLDPDHVDPAAITMKVISGVYQGVTTIQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA LAARI VSNLHK TKK FS ++D+Y + N ++G P+I+D V
Sbjct: 61 AETAAYMTTTHPDYAILAARIAVSNLHKQTKKQFSAVVEDLYTYVNPKNGKSQPMISDHV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y II +A L+S I+YDRDF+Y +FGFKTLERSYLL++ GKV ERPQHMLMRVAVGIH
Sbjct: 121 YKIIQDHAEELNSAIVYDRDFNYQFFGFKTLERSYLLRINGKVAERPQHMLMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI AI+TY MSQ++FTHASPTLFNAGTP Q+SSCFL+ MK+DSI+GIYDTLK CA+
Sbjct: 181 EDIPKAIETYDYMSQKYFTHASPTLFNAGTPSPQMSSCFLIDMKEDSIDGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATGSYI GTNGTSNG++PMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIGGTNGTSNGLIPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+F FLDLRKNHGKEE RARDLFYALW+PDLFM+RVQ NG W+L CPNE PGLA
Sbjct: 301 LEPWHADVFGFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVQENGEWTLMCPNECPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LY YEK+ K ++ V+AQ LW+ IL++Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DVYGDEFEALYESYEKQNKGRETVRAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++YT+P E AVCNLAS+ALP +V K F
Sbjct: 421 GTIRSSNLCTEIVEYTAPDEVAVCNLASLALPSFV------------------DYKRGEF 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EVT +VT NLNKII+VN+YPVE ARRSN RHRPIG+GVQGLAD F+ L +PF+S
Sbjct: 463 DFQKLHEVTQVVTRNLNKIIEVNHYPVEEARRSNFRHRPIGMGVQGLADAFLALRLPFES 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LN IFETIY+ AL +S +IA GPY+TY GSPVS+GILQ DMW V P+D WDW
Sbjct: 523 EEAKKLNIQIFETIYHAALTSSCDIAKELGPYQTYEGSPVSQGILQYDMWNVTPTDLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+++GVRNSLL+APMPTASTSQILGNNECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 ASLKAKIAEHGVRNSLLIAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL +MGLWS +KN+II D GS+ +IP IPEE K +YKTVWEI Q+T++ MA DRG +
Sbjct: 643 LKDLVDMGLWSENMKNRIIADGGSIARIPNIPEETKTLYKTVWEISQRTIIQMAADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIHM +P GK+TS+HF W GLKTGMYYLR+ AA+ I+FTVD +E
Sbjct: 703 IDQSQSLNIHMKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVD----QEQL 758
Query: 781 KVTDDDDAK 789
KV D + AK
Sbjct: 759 KVADTNIAK 767
>gi|426245029|ref|XP_004016318.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit [Ovis
aries]
Length = 791
Score = 1124 bits (2907), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 536/810 (66%), Positives = 654/810 (80%), Gaps = 21/810 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG+QE V FDKIT+R++KL YGL+++ DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT HPDYA LAARI VSNLHK TKK FS+ ++D++N+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLFNYINPHNGKHSPMVAKST 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI++ N RL+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRV+VGIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+AI+TY+++S++WFTHASPTLFNAGT R QLSSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV++N WSL CPNE PGL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE+LY +YEKEG+ +KV++AQ LW+ I++SQ ETGTPYML+KD+CN+KSNQQNL
Sbjct: 361 EVWGEEFEKLYERYEKEGRVRKVIKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YTS E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KLAEVT ++ NLNKIID+NYYPV A SN RHRPIGIGVQGLAD FIL+ PF+S
Sbjct: 462 DFTKLAEVTKVIVRNLNKIIDINYYPVPEASLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S ++A GPYETY GSPVSKGILQ DMW V P+D WDW
Sbjct: 522 PEAQLLNKQIFETIYYGALEASCDLAKEYGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 SLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE GLW+ +KN+II +GS+Q IP+IP++LK +YKTVWEI QKT++ MA +RG +
Sbjct: 642 LKDLTERGLWNEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR+R AA+ I+FT++ LK+
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 KVTDDDDA--KMAQMVCSLTNREECMACGS 808
KV+ +++ A MVCSL NR+EC+ CGS
Sbjct: 762 KVSKEEEKERNTAAMVCSLENRDECLMCGS 791
>gi|226293011|gb|EEH48431.1| ribonucleoside-diphosphate reductase large chain [Paracoccidioides
brasiliensis Pb18]
Length = 881
Score = 1124 bits (2907), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/790 (66%), Positives = 632/790 (80%), Gaps = 22/790 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG++E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK FS I D+Y+++N ++G AP+I+
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSSVIDDLYHYHNPKNGRPAPMISQST 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+I+M++A +S I+YDRDF+Y YFGFKTLERSYLL++ GKV ERPQHM+MRVA+GIH
Sbjct: 121 YEIVMRHADEFNSAIVYDRDFNYQYFGFKTLERSYLLRINGKVAERPQHMIMRVAIGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD++ I+TY++MSQ++FTHASPTLFNAGTP+ Q++SCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 DDVERVIETYNLMSQKYFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+++H IR TGSYI GTNG+SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNIHRIRGTGSYIAGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIFEFLDLRKNHGKEE RARDLF ALW PDLFM+RV+ NG W+LFCPNEAPGLA
Sbjct: 301 LEPWHMDIFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNGEWTLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LY KYEKEG+ KK ++AQ LW+ IL++Q ETG P+ML+KD CNKKSNQ+NL
Sbjct: 361 DVYGDEFEALYEKYEKEGRGKKTIKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+I+Y SP E AVCNLASIALP +V + RG +
Sbjct: 421 GTIRSSNLCTEIIEYCSPDEVAVCNLASIALPTFVDAV--------------RGE----Y 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL EVT +V NLN+IID NYYPVE A+RSN RHRPI GVQGLAD F+ L +PFDS
Sbjct: 463 DFGKLHEVTQVVVRNLNRIIDRNYYPVEEAKRSNFRHRPIACGVQGLADAFLALRLPFDS 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+QLN IFETIY+ L S E+A +GPY +Y GSPVS+GILQ DMWGV P+D WDW
Sbjct: 523 PEAKQLNIQIFETIYHACLTASCELAKVDGPYSSYEGSPVSQGILQYDMWGVTPTDLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+K+GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF +VN L
Sbjct: 583 DSLKQEIAKHGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQIVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++GLWS +KN+II D GS+Q IP IP+++KA+YKTVWEI Q+T+V MA DRG +
Sbjct: 643 LKDLVDLGLWSDNMKNRIIADGGSIQNIPNIPQDIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +P GK+TS+HF W GLKTGMYYLR+ AA+ I+FTVD +E
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFTGWKLGLKTGMYYLRTMAASAPIQFTVD----QEQL 758
Query: 781 KVTDDDDAKM 790
KV D + A++
Sbjct: 759 KVADTNVARV 768
>gi|5006420|gb|AAD37491.1| ribonucleotide reductase M1 subunit [Homo sapiens]
Length = 792
Score = 1124 bits (2907), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/811 (66%), Positives = 654/811 (80%), Gaps = 22/811 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+K+DG+QE V FDKIT+R++KL YGL+++ DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKQDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT HPDYA LAARI VSNLHK TKK FS+ ++D+YN+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKST 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI++ N RL+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRV+VGIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+AI+TY+++S+RWFTHASPTLFNAGT R QLSSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV++N WSL CPNE PGL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE+LY YEK+G+ +KVV+AQ LW+ I++SQ ETGTPYML+KD+CN+KSNQQNL
Sbjct: 361 EVWGEEFEKLYASYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YTS E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLAEVT +V NLNKIID+NYYPV A SN RHRPIGIGVQGLAD FIL+ PF+S
Sbjct: 462 DFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S ++A +GPYETY GSPVSKGILQ DMW V P+D WDW
Sbjct: 522 AEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 KVLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE GLW +KN+II +GS+Q IP+IP++LK +YKTVWEI QKT++ MA +RG +
Sbjct: 642 LKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR+R AA+ I+FT++ LK+
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 KVTDDDDA---KMAQMVCSLTNREECMACGS 808
KV+ +++ A MVCSL NR+EC+ CGS
Sbjct: 762 KVSKEEEEKERNTAAMVCSLENRDECLMCGS 792
>gi|390603430|gb|EIN12822.1| ribonucleotide reductase alpha subunit [Punctularia strigosozonata
HHB-11173 SS5]
Length = 887
Score = 1124 bits (2907), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/775 (67%), Positives = 628/775 (81%), Gaps = 20/775 (2%)
Query: 2 YVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAA 61
YV KR ++E V FDKITAR+ KL YGL EH D V V+QKV GVY GVTT +LD LA+
Sbjct: 3 YVFKRGERKERVQFDKITARIAKLCYGLDTEHVDAVEVAQKVIAGVYPGVTTVELDNLAS 62
Query: 62 ETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVY 121
ETAA +TT HPDYA+LAARI VSNLHK TKKSFS I+D+Y + N ++G A +I+ + Y
Sbjct: 63 ETAAYLTTKHPDYATLAARIAVSNLHKETKKSFSSVIRDLYTYVNPKNGRPAGMISKETY 122
Query: 122 DIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKD 181
D++M NA LDS IIYDRDF+Y++FGFKTLERSYLL++ G+V ERPQHM+MRVAVGIH +
Sbjct: 123 DVVMANADTLDSAIIYDRDFNYNFFGFKTLERSYLLRINGRVAERPQHMIMRVAVGIHGN 182
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAII 241
DID A++TY++MS+R FTHASPTLFNAGTP QLSSCFLV MKDDSIEGIYDTLK CA+I
Sbjct: 183 DIDRALETYNLMSERCFTHASPTLFNAGTPHPQLSSCFLVAMKDDSIEGIYDTLKNCAMI 242
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SK+AGGIG+ +HNIRATGSYI GTNG SNGIVPMLR ++ TARYVDQGG KR GAFA+YL
Sbjct: 243 SKTAGGIGLHIHNIRATGSYIAGTNGYSNGIVPMLRAYDATARYVDQGGNKRPGAFAIYL 302
Query: 302 EPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLAD 361
EPWHAD+FEF+DLRKNHGKEE RARDLFYALWVPDLFM+RV++NG WSLFCPNEAPGL +
Sbjct: 303 EPWHADVFEFIDLRKNHGKEEVRARDLFYALWVPDLFMKRVEANGEWSLFCPNEAPGLHE 362
Query: 362 CWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG 421
WG EF++LY KYEKEG+A+K + AQ LW+ I+++QIETG P+ML+KD N KSNQQNLG
Sbjct: 363 VWGEEFDKLYEKYEKEGRARKTIPAQKLWYAIMEAQIETGGPFMLYKDAANSKSNQQNLG 422
Query: 422 TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFD 481
TIKSSNLCTE+++Y+SP ETAVCNLASIALP +V KN +D
Sbjct: 423 TIKSSNLCTEIMEYSSPDETAVCNLASIALPTFV--------------------KNGVYD 462
Query: 482 FEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDST 541
F++L V +VT NLN+IIDVNYYPV ARRSN+RHRPIG+GVQGLADTF++L MPFDS
Sbjct: 463 FKRLHAVAKVVTFNLNRIIDVNYYPVPEARRSNIRHRPIGVGVQGLADTFMILRMPFDSP 522
Query: 542 EAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWG 601
EA++LN IFETIY+ AL S EIAA +GPYET+ GSP S+G LQ D+WGV PS WDW
Sbjct: 523 EAKELNIQIFETIYHAALEASCEIAAVDGPYETFQGSPASQGQLQFDLWGVTPSGLWDWQ 582
Query: 602 GLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
L+D I + G+RNSLL+APMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VV LL
Sbjct: 583 SLKDKIMQTGLRNSLLLAPMPTASTSQILGFNECFEPYTSNIYTRRVLAGEFQVVCPWLL 642
Query: 662 HDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYI 721
+L ++ LW+ +KN II ++GS+Q I IP+++KAIYKTVWEI QK ++DMA DRG +I
Sbjct: 643 RELVDLKLWNDQMKNMIIANNGSIQSIAGIPDDIKAIYKTVWEISQKKVLDMAADRGAFI 702
Query: 722 DHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
SQSLN+H+ P G+LTS+HF+ W +GLKTGMYYLR+R AA AI+FTVD +VL
Sbjct: 703 CQSQSLNVHLQSPTMGQLTSMHFYGWKKGLKTGMYYLRTRPAAQAIQFTVDQTVL 757
>gi|392871374|gb|EAS33278.2| ribonucleoside-diphosphate reductase large chain [Coccidioides
immitis RS]
Length = 877
Score = 1124 bits (2907), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/777 (67%), Positives = 629/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG++E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK FS I D+Y++ N ++ AP+I+
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSSVIDDLYHYINPKNNRPAPMISQKT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+I+MK++A L+S I+YDRDF+Y YFGFKTLERSYLL++ GKV ERPQHM+MRVAVGIH
Sbjct: 121 YEIVMKHSAELNSAIVYDRDFNYQYFGFKTLERSYLLRINGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI+ AI+TY++MSQ++FTHASPTLFNAGTP+ Q++SCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 EDIEKAIETYNLMSQKFFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATGSYI GTNG+SNGI+PMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIAGTNGSSNGIIPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DIFEFLDLRKNHGKEE RARDLF ALW PDLFM+RV+ NG W+LFCPNEAPGLA
Sbjct: 301 LEPWHSDIFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNGDWTLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LY +YEKEG+ +K ++AQ LW+ IL++Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DVYGDEFEALYEQYEKEGRGRKTIKAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+I+YTSP E AVCNLAS+ALP YV + RG +
Sbjct: 421 GTIRSSNLCTEIIEYTSPDEVAVCNLASLALPTYVDPV--------------RGE----Y 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL EVT ++ NLNKIID N+YPV AR+SN RHRPI +GVQGLAD F+ L +PFDS
Sbjct: 463 DFGKLHEVTQVLVRNLNKIIDGNHYPVPEARKSNFRHRPIAVGVQGLADAFLALRLPFDS 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+QLN IFETIY+ AL S +IA +GPYETY GSPVS+GILQ DMW V P+D WDW
Sbjct: 523 PEARQLNIQIFETIYHAALTASCDIAKVDGPYETYEGSPVSQGILQYDMWNVTPTDLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+K+GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 DSLKRDIAKHGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++GLWS +KN+II + GS+Q IP IP ++KA+YKTVWEI Q+T+V MA DRG Y
Sbjct: 643 LKDLVDLGLWSDNMKNRIIAEGGSIQNIPNIPADIKALYKTVWEISQRTIVQMAADRGAY 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
ID SQSLNIH+ +P GK+TS+HF W GLKTGMYYLR+ AA+ I+FTVD LK
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEQLK 759
>gi|42490975|gb|AAH66217.1| Ribonucleotide reductase M1 [Mus musculus]
Length = 792
Score = 1124 bits (2906), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 539/811 (66%), Positives = 652/811 (80%), Gaps = 22/811 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG+QE V FDKIT+R++KL YGL+++ DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT HPDYA LAARI VSNLHK TKK FS+ ++D+YN+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGRHSPMVASST 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI+M N RL+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRV+VGIHK
Sbjct: 121 LDIVMANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+AI+TY+++S++WFTHASPTLFNAGT R QLSSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV++N WSL CPNE PGL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE+LY YEK+G+ +KVV+AQ LW+ I++SQ ETGTPYML+KD+CN+KSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YTS E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TPEHTY 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DFEKLAEVT ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FIL+ PF+S
Sbjct: 462 DFEKLAEVTKVIVRNLNKIIDINYYPIPEAHLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S E+A GPYETY GSPVSKGILQ DMW V P+D WDW
Sbjct: 522 PEAQLLNKQIFETIYYGALEASCELAKEYGPYETYEGSPVSKGILQYDMWNVAPTDLWDW 581
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 KPLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE GLW+ +KN+II +GS+Q IP+IP++LK + KTVWEI QKT++ MA +RG +
Sbjct: 642 LKDLTERGLWNEEMKNQIIACNGSIQSIPEIPDDLKQLCKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR+R AA+ I+FT++ LK+
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 KVTDDDDAKM---AQMVCSLTNREECMACGS 808
K +++ K A MVCSL NREEC+ CGS
Sbjct: 762 KALKEEEEKERDTAAMVCSLENREECLMCGS 792
>gi|119501198|ref|XP_001267356.1| ribonucleotide reductase large subunit RNR1, putative [Neosartorya
fischeri NRRL 181]
gi|119415521|gb|EAW25459.1| ribonucleotide reductase large subunit RNR1, putative [Neosartorya
fischeri NRRL 181]
Length = 859
Score = 1124 bits (2906), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/789 (66%), Positives = 636/789 (80%), Gaps = 22/789 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG++E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK FS I D+Y++ N ++ AP+I+ +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSLVISDLYHYVNPKNKQPAPMISKET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+I+MK+A L+S I+YDRDF+Y++FGFKTLERSYLL++ GKV ERPQH+LMRVAVGIH
Sbjct: 121 YEIVMKHADELNSAIVYDRDFNYNFFGFKTLERSYLLRINGKVAERPQHLLMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
++I+ AI+TYH+MSQ++FTHASPTLFNAGTP+ QL+SCFLV MK+DSIEGIYDTLK CA+
Sbjct: 181 NNIEKAIETYHLMSQKYFTHASPTLFNAGTPQPQLASCFLVDMKEDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATGSYI GTNG+SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIGGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+FEFLDLRKNHGKEE RARDLFYALW PDLFM+RV+SNG W+LFCPNEAPGLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFYALWTPDLFMKRVESNGDWTLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EF+ LY +YEKEG+ +K ++AQ LW+ IL++Q ETG P+ML+KD CNKKSNQ+NL
Sbjct: 361 DVYGDEFDALYEQYEKEGRGRKTIKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+I+Y++P E AVCNLAS+ALP +V +RG +
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASLALPTFVD--------------AARGE----Y 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL EV ++ NLNKIIDVNYYPV A++SN+RHRPI +GV GLAD F+ L +PFDS
Sbjct: 463 DFGKLHEVVQVLVRNLNKIIDVNYYPVPEAKKSNMRHRPIALGVNGLADAFLALRLPFDS 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+QLN IFETIY+ AL S E+A GPYETY GSPVS+GILQ DMW P+D WDW
Sbjct: 523 AEARQLNIQIFETIYHGALTASCELAKEFGPYETYEGSPVSQGILQYDMWDRTPTDLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+++GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 DSLKTKIAQHGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++GLWS +KN+II D GSVQ IP IP ++KA+YKTVWEI Q+T++ MA DRG +
Sbjct: 643 LKDLVDLGLWSDNMKNRIIADGGSVQNIPNIPADIKALYKTVWEISQRTILQMAADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +P GKLTS+HF W GLKTGMYYLR+ AA+ I+FTVD +E
Sbjct: 703 IDQSQSLNIHLKEPTMGKLTSMHFAGWKMGLKTGMYYLRTMAASAPIQFTVD----QEQL 758
Query: 781 KVTDDDDAK 789
KV D + A+
Sbjct: 759 KVADTNVAR 767
>gi|70994760|ref|XP_752157.1| ribonucleotide reductase large subunit Rnr1 [Aspergillus fumigatus
Af293]
gi|66849791|gb|EAL90119.1| ribonucleotide reductase large subunit Rnr1, putative [Aspergillus
fumigatus Af293]
gi|159124928|gb|EDP50045.1| ribonucleotide reductase large subunit RNR1, putative [Aspergillus
fumigatus A1163]
Length = 859
Score = 1123 bits (2905), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/777 (67%), Positives = 630/777 (81%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG++E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK FS I D+Y++ N ++ AP+I+ +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSLVISDLYHYVNPKNKQPAPMISKET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+I+MK+A L+S I+YDRDF+Y++FGFKTLERSYLL++ GKV ERPQH+LMRVAVGIH
Sbjct: 121 YEIVMKHADELNSAIVYDRDFNYNFFGFKTLERSYLLRINGKVAERPQHLLMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
++I+ AI+TYH+MSQ++FTHASPTLFNAGTP+ QL+SCFLV MK+DSIEGIYDTLK CA+
Sbjct: 181 NNIEKAIETYHLMSQKYFTHASPTLFNAGTPQPQLASCFLVDMKEDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATGSYI GTNG+SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIGGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIFEFLDLRKNHGKEE RARDLFYALW PDLFM+RV+SNG W+LFCPNEAPGLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEEVRARDLFYALWTPDLFMKRVESNGDWTLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EF+ LY +YEKEG+ +K ++AQ LW+ IL++Q ETG P+ML+KD CNKKSNQ+NL
Sbjct: 361 DVYGDEFDALYERYEKEGRGRKTIKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+I+Y++P E AVCNLAS+ALP +V +RG +
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASLALPTFVD--------------AARGE----Y 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL EV ++ NLNKIIDVNYYPV A++SN+RHRPI +GV GLAD F+ L +PFDS
Sbjct: 463 DFGKLHEVVQVLVRNLNKIIDVNYYPVPEAKKSNMRHRPIALGVNGLADAFLALRLPFDS 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+QLN IFETIY+ AL S E+A GPYETY GSPVS+GILQ DMW P+D WDW
Sbjct: 523 AEARQLNIQIFETIYHGALTASCELAKEFGPYETYEGSPVSQGILQYDMWDRTPTDLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+++GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 DSLKAKIAQHGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++GLWS +KN+II D GSVQ IP IP ++KA+YKTVWEI Q+T++ MA DRG +
Sbjct: 643 LKDLVDLGLWSDNMKNRIIADGGSVQNIPNIPADIKALYKTVWEISQRTILQMAADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
ID SQSLNIH+ +P GKLTS+HF W GLKTGMYYLR+ AA+ I+FTVD LK
Sbjct: 703 IDQSQSLNIHLKEPTMGKLTSMHFAGWKMGLKTGMYYLRTMAASAPIQFTVDQEQLK 759
>gi|303316562|ref|XP_003068283.1| Ribonucleoside-diphosphate reductase large chain, putative
[Coccidioides posadasii C735 delta SOWgp]
gi|240107964|gb|EER26138.1| Ribonucleoside-diphosphate reductase large chain, putative
[Coccidioides posadasii C735 delta SOWgp]
Length = 877
Score = 1123 bits (2905), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/777 (67%), Positives = 629/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG++E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK FS I D+Y++ N ++ AP+I+
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSSVIDDLYHYINPKNNRPAPMISQKT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+I+MK++A L+S I+YDRDF+Y YFGFKTLERSYLL++ GKV ERPQHM+MRVAVGIH
Sbjct: 121 YEIVMKHSAELNSAIVYDRDFNYQYFGFKTLERSYLLRINGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI+ AI+TY++MSQ++FTHASPTLFNAGTP+ Q++SCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 EDIEKAIETYNLMSQKFFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATGSYI GTNG+SNGI+PMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIAGTNGSSNGIIPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DIFEFLDLRKNHGKEE RARDLF ALW PDLFM+RV+ NG W+LFCPNEAPGLA
Sbjct: 301 LEPWHSDIFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNGDWTLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LY +YEKEG+ +K ++AQ LW+ IL++Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DVYGDEFEALYEQYEKEGRGRKTIKAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+I+YTSP E AVCNLAS+ALP YV + RG +
Sbjct: 421 GTIRSSNLCTEIIEYTSPDEVAVCNLASLALPTYVDPV--------------RGE----Y 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL EVT ++ NLNKIID N+YPV AR+SN RHRPI +GVQGLAD F+ L +PFDS
Sbjct: 463 DFGKLHEVTQVLVRNLNKIIDGNHYPVPEARKSNFRHRPIAVGVQGLADAFLALRLPFDS 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+QLN IFETIY+ AL S +IA +GPYETY GSPVS+G+LQ DMW V P+D WDW
Sbjct: 523 PEARQLNIQIFETIYHAALTASCDIAKVDGPYETYEGSPVSQGVLQYDMWNVTPTDLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+K+GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 DSLKRDIAKHGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++GLWS +KN+II + GS+Q IP IP ++KA+YKTVWEI Q+T+V MA DRG Y
Sbjct: 643 LKDLVDLGLWSDNMKNRIIAEGGSIQSIPNIPADIKALYKTVWEISQRTIVQMAADRGAY 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
ID SQSLNIH+ +P GK+TS+HF W GLKTGMYYLR+ AA+ I+FTVD LK
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEQLK 759
>gi|358058031|dbj|GAA96276.1| hypothetical protein E5Q_02942 [Mixia osmundae IAM 14324]
Length = 980
Score = 1123 bits (2905), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/799 (64%), Positives = 639/799 (79%), Gaps = 20/799 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V KRDG++E V FDKITAR+ KL YGL +P+ +++KV +GVY+GVTT +LD LA
Sbjct: 109 MVVFKRDGRREQVAFDKITARINKLCYGLDTNFVEPIEITKKVISGVYQGVTTVELDNLA 168
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA LAARI +SNLHK TKK+FS ++D+Y N ++ +P+I+D+
Sbjct: 169 AETAAYMTTRHPDYAILAARIAISNLHKETKKTFSSVVEDLYRWVNPKNNKASPMISDET 228
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y +M+NA L+S +IYDRDF+Y+YFGFKTLERSYLL++ GKV ERPQHMLMRVAVGIH
Sbjct: 229 YKAVMENADVLNSAVIYDRDFNYNYFGFKTLERSYLLRINGKVAERPQHMLMRVAVGIHG 288
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+I+ +++Y++MS+R+FTHASPTLFNAGTP QLSSCFLVCMKDDSI+GIYDTLK CA+
Sbjct: 289 SNIEKVVESYNLMSERYFTHASPTLFNAGTPHPQLSSCFLVCMKDDSIDGIYDTLKTCAM 348
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+++HNIRATGSYI GTNG SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 349 ISKTAGGIGLNIHNIRATGSYIAGTNGYSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 408
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWHAD+F+FLDLRKNHGKEE RARDLFYALW+PD+FM RV+ NG W LFCP EAPGLA
Sbjct: 409 IEPWHADVFDFLDLRKNHGKEEVRARDLFYALWIPDMFMRRVEQNGDWPLFCPAEAPGLA 468
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ +G EF+ L+ KYEKEG+AKK ++AQ LW+ IL+SQ+ETG P+ML+KD N KSNQ+NL
Sbjct: 469 EVYGKEFDALFEKYEKEGRAKKTIKAQKLWYAILESQVETGNPFMLYKDAANSKSNQKNL 528
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I+Y++P E AVCNLASIALP +V G +
Sbjct: 529 GTIKSSNLCTEIIEYSAPDEVAVCNLASIALPTFVTGKGT-------------------Y 569
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL +VT +VT NLN+IIDVNYYPV AR SN+RHRPIGIGVQGLAD F+ L +PFDS
Sbjct: 570 DFQKLHDVTKVVTRNLNRIIDVNYYPVIEARNSNMRHRPIGIGVQGLADAFMALRLPFDS 629
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
A++LN IFETIY+ +L SS+IAA +GPY TY GSP+SKG LQ DMWG P+D WDW
Sbjct: 630 PAAKKLNIQIFETIYHASLEASSDIAAVDGPYSTYEGSPISKGELQFDMWGKTPTDLWDW 689
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+ I+K G RNSLL+APMPTASTSQILG NECFEPYTSNIYSRRVL+GEF +VN L
Sbjct: 690 DSLREKIAKTGTRNSLLMAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQIVNPWL 749
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL E+GLW +KN+II +GS+ I IP++LKAIY+TVWEI QK+++DM+ DRG Y
Sbjct: 750 LRDLVELGLWDDELKNRIIAHNGSIANINGIPQDLKAIYRTVWEISQKSIIDMSADRGAY 809
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ P F +LTS++F+ W +GLKTGMYYLR++AAA AI+FTV + L++
Sbjct: 810 IDQSQSLNIHLQSPTFAQLTSMNFYGWKKGLKTGMYYLRTKAAASAIQFTV-SQALQDEV 868
Query: 781 KVTDDDDAKMAQMVCSLTN 799
K T+ A + + ++TN
Sbjct: 869 KATNKKSAAGKKPLATVTN 887
>gi|348555237|ref|XP_003463430.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Cavia porcellus]
Length = 792
Score = 1123 bits (2904), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 537/811 (66%), Positives = 653/811 (80%), Gaps = 22/811 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG+QE V FDKIT+R++KL YGL+++ DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT HPDYA LAARI VSNLHK TKK FS+ ++D++N+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLFNYINPHNGKHSPMVAKST 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI++ N RL+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRV+VGIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+AI+TY+++S+RWFTHASPTLFNAGT R QLSSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV++N WSL CPNE PGL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE+LY +YEK+G+ +KVV+AQ LW+ I++SQ ETGTPYML+KD+CN+KSNQQNL
Sbjct: 361 EVWGEEFEKLYERYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YTS E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLAEVT ++ NLNKIID+NYYPV A SN RHRPIGIGVQGLAD FIL+ PF+S
Sbjct: 462 DFKKLAEVTKVIVRNLNKIIDINYYPVPEAHLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S ++A GPYETY GSPVSKGILQ DMW V P+D WDW
Sbjct: 522 PEAQLLNKQIFETIYYGALEASCDLAKEHGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K GVRNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 KLLKEKIAKYGVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE GLW+ +KN+II +GS+Q I +IP++LK +YKTVWEI QKT++ MA DRG +
Sbjct: 642 LKDLTERGLWNEKMKNQIIACNGSIQTILEIPDDLKQLYKTVWEISQKTVLKMAADRGAF 701
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR+R AA+ I+FT++ LK+
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 KVTDDDDA---KMAQMVCSLTNREECMACGS 808
K + +++ A MVCSL NR+EC+ CGS
Sbjct: 762 KASKEEEEKERNTAAMVCSLENRDECLMCGS 792
>gi|354495277|ref|XP_003509757.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
[Cricetulus griseus]
gi|344240187|gb|EGV96290.1| Ribonucleoside-diphosphate reductase large subunit [Cricetulus
griseus]
Length = 792
Score = 1122 bits (2903), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 536/811 (66%), Positives = 651/811 (80%), Gaps = 22/811 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG+QE V FDKIT+R++KL YGL+++ DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT HPDYA LAARI VSNLHK TKK FS+ ++D++N+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLHNYINPHNGRHSPMVASST 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI+M N RL+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRV+VGIHK
Sbjct: 121 LDIVMANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+AI+TY+++S++WFTHASPTLFNAGT R QLSSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV++N WSL CPNE PGL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE+LY YEK+G+ +KVV+AQ LW+ I++SQ ETGTPYML+KD+CN+KSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YTS E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TPEHTY 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLAEVT ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FIL+ PF+S
Sbjct: 462 DFQKLAEVTKVIVRNLNKIIDINYYPIPEAHLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S ++A GPYETY GSPVSKGILQ DMW V P+D WDW
Sbjct: 522 PEAQLLNKQIFETIYYGALEASCDLAKEYGPYETYEGSPVSKGILQYDMWNVVPTDLWDW 581
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K GVRNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 KLLKEKIAKYGVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE GLW+ +KN+II +GS+Q I +IP++LK +YKTVWEI QKT++ MA +RG +
Sbjct: 642 LKDLTERGLWNEEMKNQIIACNGSIQSISEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR+R AA+ I+FT++ LK+
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDRE 761
Query: 781 KVTDDDDA---KMAQMVCSLTNREECMACGS 808
K +++ A MVCSL NREEC+ CGS
Sbjct: 762 KALKEEEEKERNTAAMVCSLENREECLMCGS 792
>gi|171690020|ref|XP_001909942.1| hypothetical protein [Podospora anserina S mat+]
gi|170944965|emb|CAP71076.1| unnamed protein product [Podospora anserina S mat+]
Length = 901
Score = 1122 bits (2903), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/770 (68%), Positives = 624/770 (81%), Gaps = 18/770 (2%)
Query: 7 DGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAA 66
DG+QE V FDKITAR+ +L YGL ++H DPV ++QKV +GVY GVTT+QLD+LAAETAA
Sbjct: 1 DGRQERVQFDKITARVSRLCYGLDMDHVDPVAITQKVISGVYGGVTTAQLDDLAAETAAY 60
Query: 67 MTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMK 126
MT HPDYA LAARI VSNLHK TKK +S + D+Y++ N ++G +P+IA + Y+ +M+
Sbjct: 61 MTVTHPDYAILAARIAVSNLHKQTKKQWSSVVSDLYHYVNPKNGRPSPMIAKETYECVMR 120
Query: 127 NAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSA 186
+ LDS I+YDRDF+Y YFGFKTLERSYLLK+ GK+VERPQHM+MRVAVGI DDI+
Sbjct: 121 HKDDLDSAIVYDRDFNYQYFGFKTLERSYLLKLNGKIVERPQHMIMRVAVGIWGDDIERV 180
Query: 187 IKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAG 246
I+TY MS ++FTHASPTLFNAGTP+AQLSSCFLV MKDDSI+GIYDTLK CA+ISK AG
Sbjct: 181 IETYTYMSSKFFTHASPTLFNAGTPQAQLSSCFLVDMKDDSIDGIYDTLKTCAMISKMAG 240
Query: 247 GIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHA 306
GIG+++H IRATGSYI GTNGTSNGIVPMLRVFN+TARYVDQGG KR GAFA+YLEPWHA
Sbjct: 241 GIGLNIHRIRATGSYIAGTNGTSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIYLEPWHA 300
Query: 307 DIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTE 366
D+FEFLDLRKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+L CPNE PGLADC+G E
Sbjct: 301 DVFEFLDLRKNHGKEEIRARDLFLALWIPDLFMKRVEKNGEWTLMCPNECPGLADCYGEE 360
Query: 367 FERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSS 426
FE LY KYEKEG+ +K ++AQ LW+ IL++Q ETG P+ML+KD CN+KSNQQNLG I+SS
Sbjct: 361 FEALYEKYEKEGRGRKTIKAQKLWYAILEAQTETGNPFMLYKDACNRKSNQQNLGVIRSS 420
Query: 427 NLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLA 486
NLCTE+++Y++P E AVCNLAS+ALP++V + + +K FDF+KL
Sbjct: 421 NLCTEIVEYSAPDEVAVCNLASLALPQFV-------DYNEAK-----------FDFKKLH 462
Query: 487 EVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQL 546
EVT IV NLNKIIDVN+YPV+ A SN+RHRPIG+GVQGLAD F+ L MPF+S EA++L
Sbjct: 463 EVTQIVVRNLNKIIDVNHYPVKEAYNSNMRHRPIGLGVQGLADAFLALRMPFESAEAREL 522
Query: 547 NKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDM 606
NK IFETIY+ AL S ++A +G Y TY GSPVSKGILQ DMW V PSD WDW L+
Sbjct: 523 NKQIFETIYHAALTMSCQLAKEQGTYSTYEGSPVSKGILQYDMWNVKPSDLWDWDELKAE 582
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
I KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN LL DL +
Sbjct: 583 IKKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWLLKDLVD 642
Query: 667 MGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQS 726
MGLWS +KN+II + GS+Q IP IP ++KA+YKTVWEI Q+T+V MA DRG +ID SQS
Sbjct: 643 MGLWSDNMKNRIIAEGGSIQNIPNIPADIKALYKTVWEISQRTIVQMAADRGAFIDQSQS 702
Query: 727 LNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
LNIHM P GK+TS+HF W GLKTGMYYLR++AAA I+FTVD L
Sbjct: 703 LNIHMRDPTMGKITSMHFTGWKLGLKTGMYYLRTQAAAQPIQFTVDQEAL 752
>gi|197100140|ref|NP_001126012.1| ribonucleoside-diphosphate reductase large subunit [Pongo abelii]
gi|75041664|sp|Q5R919.1|RIR1_PONAB RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleoside-diphosphate reductase
subunit M1; AltName: Full=Ribonucleotide reductase large
subunit
gi|55730032|emb|CAH91741.1| hypothetical protein [Pongo abelii]
Length = 792
Score = 1122 bits (2903), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 537/811 (66%), Positives = 653/811 (80%), Gaps = 22/811 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG+QE V FDKIT+R++KL YGL+++ DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT HPDYA LAARI VSNLHK KK FS+ ++D+YN+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKEAKKVFSDVMEDLYNYINPHNGKHSPMVAKST 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI++ N RL+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRV+VGIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+AI+TY+++S+RWFTHASPTLFNAGT R QLSSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV++N WSL CPNE PGL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE+LY YEK+G+ +KVV+AQ LW+ I++SQ ETGTPYML+KD+CN+KSNQQNL
Sbjct: 361 EVWGEEFEKLYASYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK S+LCTE+++YTS E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSSLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLAEVT +V NLNKIID+NYYPV A SN RHRPIGIGVQGLAD FIL+ PF+S
Sbjct: 462 DFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S ++A +GPYETY GSPVSKGILQ DMW V P+D WDW
Sbjct: 522 AEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 KLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE GLW +KN+II +GS+Q IP+IP++LK +YKTVWEI QKT++ MA +RG +
Sbjct: 642 LKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR+R AA+ I+FT++ LK+
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 KVTDDDDA---KMAQMVCSLTNREECMACGS 808
KV+ +++ A MVCSL NR+EC+ CGS
Sbjct: 762 KVSKEEEEKERNTAAMVCSLENRDECLMCGS 792
>gi|121706584|ref|XP_001271554.1| ribonucleotide reductase large subunit RNR1, putative [Aspergillus
clavatus NRRL 1]
gi|119399702|gb|EAW10128.1| ribonucleotide reductase large subunit RNR1, putative [Aspergillus
clavatus NRRL 1]
Length = 859
Score = 1122 bits (2903), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/777 (66%), Positives = 629/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG++E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK FS I D+Y++ N ++ AP+I+ +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSLVISDLYHYVNPKNNNPAPMISKET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+I+MK+A L+S I+YDRDF+Y+YFGFKTLERSYLL++ GKV ERPQH+LMRVAVGIH
Sbjct: 121 YEIVMKHADELNSAIVYDRDFNYNYFGFKTLERSYLLRISGKVAERPQHLLMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI+ AI+TYH+MSQ++FTHASPTLFNAGTP+ QL+SCFLV MK+DSIEGIYDTLK CA+
Sbjct: 181 NDIEKAIETYHLMSQKYFTHASPTLFNAGTPQPQLASCFLVDMKEDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATGSYI GTNG+SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIGGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+FEFLDLRKNHGKEE RARDLFYALW PDLFM+RV++NG W+LFCPNEAPGLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFYALWTPDLFMKRVEANGDWTLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EF+ LY +YEKEG+ + ++AQ LW+ IL++Q ETG P+ML+KD CNKKSNQ+NL
Sbjct: 361 DVYGDEFDALYERYEKEGRGRSTIKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+I+Y++P E AVCNLAS+ALP +V +RG +
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASLALPTFVD--------------AARGE----Y 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL EV ++ NLNKIID+NYYPV A++SN+RHRPI +GV GLAD F+ L +PFDS
Sbjct: 463 DFGKLHEVVQVLVRNLNKIIDINYYPVPEAKKSNMRHRPIALGVNGLADAFLALRLPFDS 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+QLN IFETIY+ AL S E+A + GPYETY GSPVS+GILQ DMW P+D WDW
Sbjct: 523 PEARQLNTQIFETIYHGALTASCELAKQLGPYETYEGSPVSQGILQYDMWDRTPTDLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+++GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF +VN L
Sbjct: 583 DSLKAKIAQSGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQIVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++GLWS +KN+II D GSVQ IP IP ++KA+YKTVWEI Q+ ++ MA DRG +
Sbjct: 643 LKDLVDLGLWSDNMKNRIIADGGSVQNIPNIPADIKALYKTVWEISQRNILQMAADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
ID SQSLNIH+ +P GKLTS+HF W GLKTGMYYLR+ AA+ I+FTVD LK
Sbjct: 703 IDQSQSLNIHLKEPTMGKLTSMHFAGWKMGLKTGMYYLRTMAASAPIQFTVDQEQLK 759
>gi|363751963|ref|XP_003646198.1| hypothetical protein Ecym_4318 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889833|gb|AET39381.1| hypothetical protein Ecym_4318 [Eremothecium cymbalariae
DBVPG#7215]
Length = 877
Score = 1122 bits (2902), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/778 (65%), Positives = 640/778 (82%), Gaps = 14/778 (1%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG++E V FDKITAR+ +L YGL +H D V ++Q++ +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEQVKFDKITARISRLCYGLDPKHIDAVKITQRIISGVYEGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AET A MTT HPDYA+LAARI +SNLHK T K FS+ I D+Y++ N ++GLK+P+I+D+V
Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSQVISDLYHYINPKNGLKSPMISDEV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+I+M++ L+S I+YDRDF Y+YFGFKTLERSYLL++ G+V ERPQHM+MRVAVGIH
Sbjct: 121 YEIVMEHKDELNSAILYDRDFQYNYFGFKTLERSYLLRIDGQVAERPQHMVMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI AI+TY++MS R+FTHASPTLFNAGTP Q+SSCFLV MKDDSIEGIYDTLKECA+
Sbjct: 181 RDIKKAIETYNLMSLRYFTHASPTLFNAGTPHPQMSSCFLVAMKDDSIEGIYDTLKECAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIR+TGSYI GTNGTSNGI+PM+RV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGIIPMVRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DIF+F+D+RKNHGKEE RARDLF ALW+PDLFM RVQ NG W+LF P+EAPGL+
Sbjct: 301 LEPWHSDIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMRRVQDNGDWTLFSPSEAPGLS 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE LY +Y EG+ +K ++AQ LW+ IL++Q ETGTP++L+KD CN+KSNQ+N+
Sbjct: 361 EVWGDEFEELYERYVLEGRGRKTIKAQKLWYAILEAQTETGTPFILYKDACNRKSNQKNI 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLC E+++Y+SP ETAVCNLASIALP ++ E S K +++
Sbjct: 421 GTIKSSNLCCEIVEYSSPEETAVCNLASIALPAFIEE--------------SSDGKTQFY 466
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+F+KL ++ +VT NLN++ID NYYPVETARRSN+RHRPI +GVQGLAD F++L +PFDS
Sbjct: 467 NFQKLHDIAKVVTRNLNRVIDRNYYPVETARRSNMRHRPIALGVQGLADAFMILRIPFDS 526
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LN IFET+Y+ A S E+A EGPYE++ GSP+SKGILQ DMWG P+D WDW
Sbjct: 527 KEAKELNIQIFETLYHAACEASVELAIEEGPYESFKGSPISKGILQFDMWGRKPTDLWDW 586
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I K+G RNSLL+APMPTASTSQILG NECFEPYTSN+YSRRVLSGEF +VN +L
Sbjct: 587 QTLKAKIVKHGTRNSLLIAPMPTASTSQILGYNECFEPYTSNMYSRRVLSGEFQIVNPYL 646
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W +K+ II D+GS+Q +P IP+ELK +YKTVWE+ QKT++DMA DRG Y
Sbjct: 647 LRDLVDLGVWDESMKSHIISDNGSIQGLPNIPQELKDLYKTVWELSQKTIIDMAADRGAY 706
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE 778
ID SQSLNIH+ P G+LTS+HF+ W +GLKTGMYYLR++AA+ AI+FTVD +V ++
Sbjct: 707 IDQSQSLNIHIRAPTMGRLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTVDKAVAEQ 764
>gi|430813498|emb|CCJ29155.1| unnamed protein product [Pneumocystis jirovecii]
Length = 848
Score = 1122 bits (2902), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 534/817 (65%), Positives = 644/817 (78%), Gaps = 32/817 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG++E V FDKITAR+ +L YGL +EH D ++ KV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVAFDKITARVSRLCYGLDMEHVDAASITMKVISGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA LAARI VSNLHK TKK FS I D+Y++ N R+ +P+I+
Sbjct: 61 AETAAYMTTKHPDYAILAARIAVSNLHKQTKKVFSHVISDLYHYVNPRNNKPSPMISLKT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+ +M++A LDS IIYDRDF Y+YFGFKTLERSYLL++ GKV ERPQHM+MRVAVGIH
Sbjct: 121 YETVMRHANELDSAIIYDRDFTYNYFGFKTLERSYLLRINGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD++ AI+TY++MS ++ THASPTLFNAGTP QLSSCFLV MKDDSIEGIYDTLK CA+
Sbjct: 181 DDVEKAIETYNLMSAKYMTHASPTLFNAGTPNPQLSSCFLVTMKDDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATGSYI GTNGTSNGI+PMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHCIRATGSYIAGTNGTSNGIIPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWHADIFEFLDLRKNHGKEE RARDLFY LW+PDLFM+RV++N WSLFCPNEAPGL
Sbjct: 301 IEPWHADIFEFLDLRKNHGKEEIRARDLFYGLWIPDLFMKRVEANQDWSLFCPNEAPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LY KYE+E +A ++V+AQ LW+ IL++Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DVYGEEFEVLYEKYEQEKRATRIVKAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+I+Y+SP E AVCNLASIALP ++ + G+ +
Sbjct: 421 GTIKCSNLCTEIIEYSSPDEVAVCNLASIALPTFI-DKGI-------------------Y 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL +VT +V NLNKIIDVNYYPVE ARRSN RHRPIGIGVQGLAD F+ L MPFDS
Sbjct: 461 DFQKLHDVTKVVARNLNKIIDVNYYPVEEARRSNKRHRPIGIGVQGLADAFLSLRMPFDS 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
A++LN IFETIY+ AL S E+A EGPYETY GSP S+GILQ DMW V P+D WDW
Sbjct: 521 PHAKELNIKIFETIYHAALEASCELAQEEGPYETYEGSPASQGILQYDMWNVVPTDLWDW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I++ G+RNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 581 DSLKVNIARYGLRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++GLW+ I+KN+II ++GS+Q IP IP E+KA+YKTVWE+ QKT++D A DRG +
Sbjct: 641 LKDLVDLGLWNDIMKNRIIANNGSIQNIPSIPAEIKALYKTVWELSQKTIIDYAADRGAF 700
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFT--------VD 772
ID SQSLNIH+ P+FGK+T +HF W +GLKTGMYYLR++AA+ I+FT VD
Sbjct: 701 IDQSQSLNIHIRDPSFGKITGMHFWGWRKGLKTGMYYLRTQAASAPIQFTVDRKALEEVD 760
Query: 773 TSVLKENPKVTDDDDAKMAQMVCSL----TNREECMA 805
+VLK+ P M +V SL TN E+ ++
Sbjct: 761 ETVLKKRPSTLKHIGISMNPLVESLDDKKTNSEDTIS 797
>gi|62897131|dbj|BAD96506.1| ribonucleoside-diphosphate reductase M1 chain variant [Homo
sapiens]
Length = 792
Score = 1122 bits (2901), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/811 (66%), Positives = 652/811 (80%), Gaps = 22/811 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG+QE V FDKIT+R++KL YGL+++ DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT HPDYA LAARI VSNLHK TKK FS+ ++D+YN+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKST 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI++ N RL+S IIYDRDF Y+YFGFKTLERSYLLK GKV ERPQHMLMRV+VGIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKTNGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+AI+TY+++S+RWFTHASPTLFNAGT R QLSSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV++N WSL CPNE PGL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE+LY YEK+G+ +KVV+AQ LW+ I++SQ ETGTPYML+KD+CN+KSNQQNL
Sbjct: 361 EVWGEEFEKLYASYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YTS E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLAEVT +V NLNKIID+NYYPV A SN RHRPIGIGVQGLAD FIL+ PF+S
Sbjct: 462 DFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IF TIYY AL S ++A +GPYETY GSPVSKGILQ DMW V P+D WDW
Sbjct: 522 AEAQLLNKQIFGTIYYGALEASCDLAKEQGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 KVLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE GLW +KN+II +GS+Q IP+IP++LK +YKTVWEI QKT++ MA +RG +
Sbjct: 642 LKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR+R AA+ I+FT++ LK+
Sbjct: 702 IDQSQSLNIHVAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 KVTDDDDA---KMAQMVCSLTNREECMACGS 808
KV+ +++ A MVCSL NR+EC+ CGS
Sbjct: 762 KVSKEEEEKERNTAAMVCSLENRDECLMCGS 792
>gi|326469969|gb|EGD93978.1| ribonucleoside-diphosphate reductase large subunit [Trichophyton
tonsurans CBS 112818]
gi|326484125|gb|EGE08135.1| ribonucleoside-diphosphate reductase large subunit [Trichophyton
equinum CBS 127.97]
Length = 875
Score = 1121 bits (2900), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/777 (66%), Positives = 627/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG++E V FDKITAR+ +L YGL EH D ++Q+V +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQRVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK FS I D+Y++ N ++G AP+I++
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSSVIDDLYHYVNPKNGRPAPMISEKT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+I+MK+A L+S I+YDRDF+Y YFGFKTLERSYLL+ GKV ERPQHM+MRVAVGIH
Sbjct: 121 REIVMKHAEELNSAIVYDRDFNYQYFGFKTLERSYLLRTNGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+D++ I+TY++MSQ++FTHASPTLFNAGTP+ Q++SCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 EDVEKVIETYNLMSQKYFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATGSYI GTNG+SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIAGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+FEFLDLRKNHGKEE RARDLF ALW PDLFM+RV+ NG W+LFCPNEAPGLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNGDWTLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LY KYEKEG+ + ++AQ LW+ IL++Q ETG P+ML+KD+CN+KSNQ+NL
Sbjct: 361 DVYGEEFEALYEKYEKEGRGRTTIKAQKLWYAILEAQTETGNPFMLYKDSCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++YT+P E AVCNLASIALP +V + RG +
Sbjct: 421 GTIRSSNLCTEIVEYTAPDEVAVCNLASIALPTFVDAV--------------RGE----Y 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL EVT +V NLN+IID N+YPVE ARRSN RHRPI +GVQGLAD F+ L +PFDS
Sbjct: 463 DFGKLHEVTQVVVRNLNRIIDGNHYPVEEARRSNFRHRPIAVGVQGLADAFLALRLPFDS 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+ LN IFET+Y+ AL S E+A +GPY +Y GSPVS+GILQ DMW V P+D WDW
Sbjct: 523 PEAKLLNTQIFETLYHAALTASCELAKVDGPYSSYEGSPVSQGILQYDMWNVTPTDLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
GL+ ISK+GVRNSLL+APMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 DGLKAEISKHGVRNSLLLAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++GLWS +KN+II D GS+Q IP IP ++KA+YKTVWEI Q+T+V MA DRG +
Sbjct: 643 LKDLVDLGLWSDNMKNRIIADGGSIQNIPNIPADIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
ID SQSLNIH+ +P GK+TS+HF W GLKTGMYYLR+ AA+ I+FTVD LK
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEQLK 759
>gi|342884077|gb|EGU84420.1| hypothetical protein FOXB_05085 [Fusarium oxysporum Fo5176]
Length = 897
Score = 1121 bits (2900), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/777 (66%), Positives = 625/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG+QE V FDKITAR+ +L YGL ++H DPV ++QKV +GVY GVTT QLD+LA
Sbjct: 1 MFVRKRDGRQERVQFDKITARVSRLCYGLDMDHVDPVAITQKVISGVYGGVTTVQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK +S + D+Y++ N ++G +P+I+ +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSAVVSDLYHYVNPKNGRPSPMISKET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+ +M++ LDS I+YDRDF Y YFGFKTLERSYLLK+ GK+VERPQHM+MRV+VGI
Sbjct: 121 YECVMRHKEELDSAIVYDRDFQYQYFGFKTLERSYLLKIDGKIVERPQHMIMRVSVGIWG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDI+ ++TY++MS ++FTHASPTLFNAGTP+ QLSSCFLV MKDDSIEGIYDTLK CA+
Sbjct: 181 DDIERVLETYNLMSSKFFTHASPTLFNAGTPQPQLSSCFLVDMKDDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG++VH IRATGSYI GTNGTSNG+VPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKMAGGIGLNVHRIRATGSYIAGTNGTSNGVVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+D+FEFLDLRKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+L CPNE PGLA
Sbjct: 301 LEPWHSDVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNGDWTLMCPNECPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EFE LY KYEKEGK +K ++AQ LW+ IL++Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DCYGEEFEALYEKYEKEGKGRKTIKAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+I+Y +P E AVCNLAS+ALP ++ +
Sbjct: 421 GTIRSSNLCTEIIEYCAPDEVAVCNLASLALPSFI------------------NYDEACY 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL +V+ +V NLNKIIDVN+YPV+ AR SN+RHRPIG+GVQGLAD F+ L MPF+S
Sbjct: 463 DFKKLHKVSQVVIRNLNKIIDVNHYPVQEARNSNMRHRPIGLGVQGLADAFLALRMPFES 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LNK IFETIY+ AL S ++A EGPY T+ GSP S+GILQ DMW V PSD WDW
Sbjct: 523 PEARELNKQIFETIYHAALTASVQLAKEEGPYSTFKGSPASEGILQFDMWNVKPSDLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+ + +G+RNSLL+APMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 ETLREEVKTHGIRNSLLLAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL +MGLWS +KN+II ++GS+Q IP IP ++KA+YKTVWEI Q+ +V MA DRG +
Sbjct: 643 LKDLVDMGLWSDAMKNRIIAENGSIQNIPNIPADVKALYKTVWEISQRQVVQMAADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
ID SQSLNIHM P GK+TS+HF W GLKTGMYYLR++AAA I+FTVD LK
Sbjct: 703 IDQSQSLNIHMKDPTMGKITSMHFAGWKLGLKTGMYYLRTQAAAAPIQFTVDQQALK 759
>gi|384500853|gb|EIE91344.1| hypothetical protein RO3G_16055 [Rhizopus delemar RA 99-880]
Length = 803
Score = 1121 bits (2900), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/819 (63%), Positives = 644/819 (78%), Gaps = 31/819 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG++E V FDKIT+R+ KL YGL+ ++ PV +SQKV +GVY+G+TT +LD LA
Sbjct: 1 MFVIKRDGRKEKVLFDKITSRISKLCYGLNEDYVIPVKISQKVISGVYQGITTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTTNHPD+A+LAARIV+SNL K T FS ++ +Y+H + + +PL++ ++
Sbjct: 61 AETAAYMTTNHPDFATLAARIVISNLQKETDDKFSAVVQKLYHHEHPKLKQASPLVSKEL 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YD++M NA+++D+ I ++RD+D+++FGFKTLERSYLLK+ G++VERPQ+M+MRVA+GIH
Sbjct: 121 YDVVMANASKIDAAIKHERDYDFNFFGFKTLERSYLLKINGRIVERPQYMIMRVAIGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D++ A KTY +MS ++FTHA+PTLFNAGTPR QLSSCFLV M++DSIEGIYDTL CA
Sbjct: 181 GDLEGAFKTYDLMSSKYFTHATPTLFNAGTPRPQLSSCFLVQMREDSIEGIYDTLTTCAR 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGG+GV+ IR +GSYI GTNGTSNG++PMLRVFNDTAR+V QGGGKR G FA+Y
Sbjct: 241 ISKAAGGVGVAAQKIRGSGSYIAGTNGTSNGVIPMLRVFNDTARFVTQGGGKRNGNFAMY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH D+F+FLDLRKN+G EE RARDLF LWVPDLFM+RV+ NG WSLFCP+EAPGL
Sbjct: 301 LEPWHVDVFDFLDLRKNNGAEEMRARDLFLGLWVPDLFMKRVEQNGKWSLFCPDEAPGLW 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G +F+ LY KYE EGKA+K ++AQ LWF IL++Q ETG PYML+KD CN+KSNQ+NL
Sbjct: 361 DSYGEKFDALYIKYENEGKARKTIEAQKLWFAILEAQTETGMPYMLYKDACNEKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI SSNLCTE+I+YTSP E AVCNLAS+ALP++V + + F
Sbjct: 421 GTITSSNLCTEIIEYTSPDEVAVCNLASLALPKFVNK------------------DTKTF 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL EVT +VT NLNK+IDVNYYPVE AR SN+RHRPIG+GVQGLAD FIL+G PFDS
Sbjct: 463 DFAKLHEVTKVVTRNLNKVIDVNYYPVEEARNSNMRHRPIGLGVQGLADAFILMGFPFDS 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA QLN+DIFE IY+ AL S E+A GPYETY GSP+S+GILQ DMW V SD DW
Sbjct: 523 PEAAQLNRDIFERIYFAALEASCELAKEHGPYETYLGSPISQGILQHDMWNVKDSDILDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I K GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY+RRV SGEF VVN++L
Sbjct: 583 DTLRSNIKKYGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYTRRVQSGEFQVVNQYL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L++L ++GLW+ IKN +I GS+Q+IP IP+ LK +YKTVWEI Q+T++DMA DRG Y
Sbjct: 643 LNELVDLGLWNDNIKNMMIAHGGSIQRIPGIPDRLKELYKTVWEISQRTIIDMAADRGAY 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQS+N+ +P+FGKLTS+HF+AW +GLKTGMYYLRSR A DAIKFTVD LK+
Sbjct: 703 IDQSQSMNLFTAEPSFGKLTSMHFYAWKKGLKTGMYYLRSRPAVDAIKFTVDQLALKQMS 762
Query: 781 KVTDDDDA-------------KMAQMVCSLTNREECMAC 806
DD ++AQ+ CS+ NR+ C+ C
Sbjct: 763 LSESKDDKFDSAKEAEEAEQRRLAQLQCSIDNRDACLMC 801
>gi|296479831|tpg|DAA21946.1| TPA: ribonucleoside-diphosphate reductase M1 chain [Bos taurus]
Length = 791
Score = 1121 bits (2900), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 536/810 (66%), Positives = 653/810 (80%), Gaps = 21/810 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG+QE V FDKIT+R++KL YGL+++ DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT HPDYA LAARI VSNLHK TKK FS+ ++D++N+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLFNYINPHNGKHSPMVAKST 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI++ N RL+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRV+VGIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+AI+TY+++S++WFTHASPTLFNAGT R QLSSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV++N WSL CPNE PGL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE+LY +YEKEG+ +KV++AQ LW+ I++SQ ETGTPYML+KD+CN+KSNQQNL
Sbjct: 361 EVWGEEFEKLYERYEKEGRVRKVIKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YTS E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KLAEVT ++ NLNKIID+NYYPV A SN HRPIGIGVQGLAD FIL+ PF+S
Sbjct: 462 DFTKLAEVTKVIVRNLNKIIDINYYPVPEASLSNKLHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S ++A GPYETY GSPVSKGILQ DMW V P+D WDW
Sbjct: 522 PEAQLLNKQIFETIYYGALEASCDLAKEYGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K GVRNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 NLLKEKIAKYGVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE GLW+ +KN+II +GS+Q IP+IP++LK +YKTVWEI QKT++ MA +RG +
Sbjct: 642 LKDLTERGLWNEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR+R AA+ I+FT++ LK+
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 KVTDDDDA--KMAQMVCSLTNREECMACGS 808
KV+ +++ A MVCSL NR+EC+ CGS
Sbjct: 762 KVSKEEEKERNTAAMVCSLENRDECLMCGS 791
>gi|440632150|gb|ELR02069.1| ribonucleoside-diphosphate reductase subunit M1 [Geomyces
destructans 20631-21]
Length = 827
Score = 1121 bits (2899), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/776 (67%), Positives = 621/776 (80%), Gaps = 18/776 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KR+G +E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRNGNKERVQFDKITARVSRLCYGLDAEHVDAAAITQKVISGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK FS I D+Y++ N ++ +P+IA
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSSVIHDLYHYVNPKNSKPSPMIAKKT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YDI+MK+A L+S ++YDRDF+Y YFGFKTLERSYLL++ GKV ERPQHM+MRVAVGIH
Sbjct: 121 YDIVMKHAEELNSAVLYDRDFNYQYFGFKTLERSYLLRLDGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI+ +TY++MS ++FTHASPTLFNAGTP+AQLSSCFLV MK+DSIEGIYDTLK CA+
Sbjct: 181 EDIEKTTETYNLMSSKYFTHASPTLFNAGTPQAQLSSCFLVDMKEDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+++H IRATG+YI GTNG SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNIHRIRATGAYIAGTNGNSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWHAD+FEFLDLRKNHGKEE RARDLFYALW+PDLFM+RV+ NG W+L CPNE PGLA
Sbjct: 301 VEPWHADVFEFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVEKNGAWTLMCPNECPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LY YEKEGK +K ++AQ LW+ IL+SQ ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DVYGDEFEALYEGYEKEGKGRKTIKAQKLWYSILESQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++Y++P E AVCNLAS+ALP YV +M N +
Sbjct: 421 GTIRSSNLCTEIVEYSAPDEVAVCNLASLALPTYV-DMA-----------------NGTY 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EVT +V +NLNKIIDVNYYPVE ARRSN RHRP+ +GVQGLAD F+ L +PFDS
Sbjct: 463 DFQKLHEVTQVVVKNLNKIIDVNYYPVEEARRSNFRHRPVAVGVQGLADAFLALRLPFDS 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+ LN IFETIY+ AL S E+A G YETY GSPVSKG LQ DMWGV P+D WDW
Sbjct: 523 PEAKFLNSQIFETIYHGALTASVELAQIHGTYETYEGSPVSKGELQYDMWGVTPTDLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I ++GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 DSLKVRIKQHGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL +MGLWS +KN+II D GS+Q IP IP ++KA+YKTVWEI Q+T+V MA DRG +
Sbjct: 643 LKDLVDMGLWSDNMKNRIIADGGSIQNIPNIPADIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
ID SQSLNIHM P GK+TS+HF W GLKTGMYYLR+ AA+ I+FTVD L
Sbjct: 703 IDQSQSLNIHMKDPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEAL 758
>gi|427794775|gb|JAA62839.1| Putative ribonucleotide reductase alpha subunit, partial
[Rhipicephalus pulchellus]
Length = 802
Score = 1121 bits (2899), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 532/808 (65%), Positives = 655/808 (81%), Gaps = 30/808 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRD ++E VHFDKIT+R+ KL YGL+++ DP V+QKV G+Y GVTT +LD LA
Sbjct: 25 MFVLKRDSRKEPVHFDKITSRIHKLCYGLNMDFVDPCSVAQKVINGLYPGVTTVELDNLA 84
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA LAARI VSNLHK TKK FSE ++D+YN NER+ L++P+I+D V
Sbjct: 85 AETAATMTTKHPDYAILAARIAVSNLHKETKKVFSEVVEDLYNMVNERTRLRSPMISDSV 144
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y I+M NA +S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRVA+GIH
Sbjct: 145 YKIVMDNAEVFNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVAIGIHG 204
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D+++A+ TY++MS++WFTHASPTLFN+GTPR QLSSCFL+ MK+DSIEGIYDTLK+CA+
Sbjct: 205 TDVEAALNTYNLMSEKWFTHASPTLFNSGTPRPQLSSCFLLQMKEDSIEGIYDTLKQCAL 264
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+VH IRA+G+YI GTNGTSNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 265 ISKSAGGIGVNVHCIRASGTYIAGTNGTSNGLVPMLRVYNNTARYVDQGGNKRPGAFAMY 324
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIFEFL+L+KN GKEE RARDLFYALW+PDLFM+RV+ +G+WSL CP+E PGL
Sbjct: 325 LEPWHADIFEFLELKKNTGKEETRARDLFYALWIPDLFMKRVEEDGVWSLMCPHECPGLH 384
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ EFE+LY +YE + + ++ V+AQ LW IL+SQIETGTPYML+KD CN+KSNQ+NL
Sbjct: 385 EVHSEEFEKLYVQYETDKRYRRQVRAQQLWSAILESQIETGTPYMLYKDACNRKSNQKNL 444
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTEV++YTSP E AVCNLASIAL R+V++ GS F
Sbjct: 445 GTIKCSNLCTEVVEYTSPDEVAVCNLASIALNRFVKD-------------GS-------F 484
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EV+ ++T NLN+IIDVN+YP+ A RSN RHRPIGIGVQGLAD FILL +PFDS
Sbjct: 485 DFQKLREVSQVITRNLNRIIDVNFYPIPEAERSNKRHRPIGIGVQGLADCFILLRLPFDS 544
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
+A LN+ IFETIYY AL S E+A ++GPYETY GSPVS+GILQ DMWGV P+D WDW
Sbjct: 545 EQAMLLNRQIFETIYYGALEASCELAQKDGPYETYKGSPVSEGILQYDMWGVTPTDLWDW 604
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K+GVRNSLL+APMPTAST+QILGNNE E YTSNIY+RRVLSGEF VVN+HL
Sbjct: 605 AALKEKIAKHGVRNSLLLAPMPTASTAQILGNNESIEAYTSNIYTRRVLSGEFQVVNQHL 664
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLT+ GLW+ +KN +I ++GSVQ + IPE+LKA+Y+TVWEI QK ++ MA DRG Y
Sbjct: 665 LKDLTDRGLWNESLKNDLIANNGSVQNL-DIPEDLKALYRTVWEIPQKNVLRMAADRGAY 723
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLN+H+ QPN+ KLTS+HF+ W GLKTGMYYLR++ AA+AI+FTVD + LK+
Sbjct: 724 IDQSQSLNVHIAQPNYAKLTSMHFYGWKLGLKTGMYYLRTKPAANAIQFTVDKTALKKK- 782
Query: 781 KVTDDDDAKMAQMVCSLTNREECMACGS 808
++ + CSL N++EC+ C +
Sbjct: 783 --------QLDGIACSLKNKDECLMCSA 802
>gi|149634836|ref|XP_001505371.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
[Ornithorhynchus anatinus]
Length = 792
Score = 1121 bits (2899), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 539/811 (66%), Positives = 653/811 (80%), Gaps = 22/811 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG+QE V FDKIT+R++KL YGL+++ DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT +PDYA LAARI VSNLHK TKK FS+ ++D+YN+ N +G +P++A
Sbjct: 61 AETAATLTTKYPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYVNPHNGKHSPMVAKTT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI++ N RL+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRVAVGIH+
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVAVGIHE 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+AI+TY+++S+RWFTHASPTLFNAGT R QLSSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV++N WSL CPNE PGL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNRDWSLMCPNECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE+LY YEK+G+ +KVV+AQ LW+ I++SQ ETGTPYML+KDTCN+KSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDTCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YTS E AVCNLAS+AL +V + +
Sbjct: 421 GTIKCSNLCTEIVEYTSRDEVAVCNLASLALNMFV-------------------TLEHTY 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLAEVT ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FIL+ PF+S
Sbjct: 462 DFKKLAEVTKVIVRNLNKIIDINYYPIPEASTSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LN+ IFETIYY AL S ++A GPYETY GSPVSKGILQ DMW V P+D WDW
Sbjct: 522 PEAQLLNQQIFETIYYGALDASCDLAKDHGPYETYQGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K GVRNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 KALKEKIAKYGVRNSLLLAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE GLW+ +KN+II +GS+Q IP+IPE+LK +YKTVWEI QKT++ MA +RG +
Sbjct: 642 LKDLTERGLWNEEMKNQIIACNGSIQSIPEIPEDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR+R AA+ I+FT++ LKE
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKEKE 761
Query: 781 KVTDDDDA---KMAQMVCSLTNREECMACGS 808
K T +++ A MVCSL NREEC+ CGS
Sbjct: 762 KATKEEEEKERNTAAMVCSLENREECLMCGS 792
>gi|296827688|ref|XP_002851208.1| ribonucleoside-diphosphate reductase large subunit [Arthroderma
otae CBS 113480]
gi|238838762|gb|EEQ28424.1| ribonucleoside-diphosphate reductase large subunit [Arthroderma
otae CBS 113480]
Length = 874
Score = 1120 bits (2897), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/777 (66%), Positives = 627/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG++E V FDKITAR+ +L YGL EH D ++Q+V +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQRVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK FS I D+Y++ N ++G AP+I++
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSSVIDDLYHYVNPKNGRPAPMISEKT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+I+MK+A L+S I+YDRDF+Y YFGFKTLERSYLL+ GKV ERPQHM+MRVAVGIH
Sbjct: 121 REIVMKHAEELNSAIVYDRDFNYQYFGFKTLERSYLLRTNGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+D++ I++Y++MSQ++FTHASPTLFNAGTP+ Q++SCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 EDVEKVIESYNLMSQKYFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATGSYI GTNG+SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIAGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIFEFLDLRKNHGKEE RARDLF ALW PDLFM+RV+ NG W+LFCPNEAPGLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNGEWTLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LY KYEKEG+ + ++AQ LW+ IL++Q ETG P+ML+KD+CN+KSNQ+NL
Sbjct: 361 DVYGEEFEALYEKYEKEGRGRTTIKAQKLWYAILEAQTETGNPFMLYKDSCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++YT+P E AVCNLASIALP +V + RG +
Sbjct: 421 GTIRSSNLCTEIVEYTAPDEVAVCNLASIALPTFVDAV--------------RGE----Y 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL EVT +V +NLN+IID N+YPVE ARRSN RHRPI +GVQGLAD F+ L +PFDS
Sbjct: 463 DFGKLHEVTQVVVKNLNRIIDGNHYPVEEARRSNFRHRPIAVGVQGLADAFLALRLPFDS 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+ LN IFET+Y+ AL S E+A +GPY +Y GSPVS+GILQ DMW V P+D WDW
Sbjct: 523 PEAKLLNIQIFETLYHAALTASCELAKADGPYSSYEGSPVSQGILQYDMWNVTPTDLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ ISK+GVRNSLL+APMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 DALKTEISKHGVRNSLLLAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++GLWS +KN+II D GS+Q IP IP ++KA+YKTVWEI Q+T+V MA DRG +
Sbjct: 643 LKDLVDLGLWSDNMKNRIIADGGSIQNIPNIPADIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
ID SQSLNIH+ +P GK+TS+HF W GLKTGMYYLR+ AA+ I+FTVD LK
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEQLK 759
>gi|164519000|ref|NP_001106767.1| ribonucleoside-diphosphate reductase large subunit [Bos taurus]
gi|158455067|gb|AAI09487.2| RRM1 protein [Bos taurus]
Length = 791
Score = 1120 bits (2897), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 536/810 (66%), Positives = 652/810 (80%), Gaps = 21/810 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG+QE V FDKIT+R++KL YGL+++ DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT HPDYA LAARI VSNLHK TKK FS+ ++D++N+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLFNYINPHNGKHSPMVAKST 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI++ N RL+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRV+VGIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+AI+TY+++S++WFTHASPTLFNAGT R QLSSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV++N WSL CPNE PGL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE+LY +YEKEG+ +KV++AQ LW+ I++SQ ETGTPYML+KD+CN+KSNQQNL
Sbjct: 361 EVWGEEFEKLYERYEKEGRVRKVIKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YTS E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KLAEVT ++ NLNKIID+NYYPV A SN HRPIGIGVQGLAD FIL+ PF+S
Sbjct: 462 DFTKLAEVTKVIVRNLNKIIDINYYPVPEASLSNKLHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S ++A GPYETY GSPVSKGILQ DMW V P+D WDW
Sbjct: 522 PEAQLLNKQIFETIYYGALEASCDLAKEYGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K GVRNSLL+APMPTAST QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 NLLKEKIAKYGVRNSLLIAPMPTASTVQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE GLW+ +KN+II +GS+Q IP+IP++LK +YKTVWEI QKT++ MA +RG +
Sbjct: 642 LKDLTERGLWNEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR+R AA+ I+FT++ LK+
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 KVTDDDDA--KMAQMVCSLTNREECMACGS 808
KV+ +++ A MVCSL NR+EC+ CGS
Sbjct: 762 KVSKEEEKERNTAAMVCSLENRDECLMCGS 791
>gi|344296860|ref|XP_003420120.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Loxodonta africana]
Length = 792
Score = 1120 bits (2896), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 537/811 (66%), Positives = 652/811 (80%), Gaps = 22/811 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG+QE V FDKIT+R++KL YGL+++ DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT HPDYA LAARI VSNLHK TKK FS+ ++D+YN+ N +G +P++A+
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVANST 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI++ N RL+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRV+VGIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+AI+TY+++S++WFTHASPTLFNAGT R QLSSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV++N WSL CPNE PGL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE+LY YEK G+ +KVV+AQ LW+ I++SQ ETGTPYML+KD+CN+KSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKRGRIRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YTS E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLAEVT ++ NLNKIID+NYYPV A SN RHRP+GIGVQGLAD FIL+ PF+S
Sbjct: 462 DFKKLAEVTKVIVRNLNKIIDINYYPVPEAFLSNKRHRPVGIGVQGLADAFILMRYPFES 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S E+A GPYETY GSPVSKGILQ DMW V P+D WDW
Sbjct: 522 PEAQLLNKQIFETIYYGALEASCELAKEHGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K GVRNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 KLLKEKIAKYGVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE GLW+ +KN+II +GS+Q I +IP++LK +YKTVWEI QKT++ MA +RG +
Sbjct: 642 LKDLTERGLWNEEMKNQIIACNGSIQSIHEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR+R AA+ I+FT++ LK+
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 KVTDDDDA---KMAQMVCSLTNREECMACGS 808
K + +++ A MVCSL NR+ECM CGS
Sbjct: 762 KASKEEEEKERNTAAMVCSLENRDECMMCGS 792
>gi|238491914|ref|XP_002377194.1| ribonucleotide reductase large subunit Rnr1, putative [Aspergillus
flavus NRRL3357]
gi|317146285|ref|XP_001821413.2| ribonucleoside-diphosphate reductase large chain [Aspergillus
oryzae RIB40]
gi|220697607|gb|EED53948.1| ribonucleotide reductase large subunit Rnr1, putative [Aspergillus
flavus NRRL3357]
gi|391869144|gb|EIT78349.1| ribonucleotide reductase, alpha subunit [Aspergillus oryzae 3.042]
Length = 854
Score = 1120 bits (2896), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/777 (66%), Positives = 629/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG++E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA LAARI VSNLHK TKK FS I D+Y++ N ++ AP+I+ +
Sbjct: 61 AETAAYMTTTHPDYAILAARIAVSNLHKQTKKQFSLVISDLYHYINPKNKKPAPMISKET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+I+MK+A L+S I+YDRDF+Y++FGFKTLERSYLL++ GKV ERPQH+LMRV+VGIH
Sbjct: 121 YEIVMKHADELNSAIVYDRDFNYNFFGFKTLERSYLLRIDGKVAERPQHLLMRVSVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI+ AI+TYH+MSQ++FTHASPTLFNAGTP+ QL+SCFLV MK+DSIEGIYDTLK CA+
Sbjct: 181 NDIEKAIETYHLMSQKYFTHASPTLFNAGTPQPQLASCFLVDMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATGSYI GTNG+SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIGGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+FEFLDLRKNHGKEE RARDLFYALW PDLFM+RV++NG W+LFCPNEAPGLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFYALWTPDLFMKRVEANGDWTLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LY +YEKEG+ +K ++AQ LW+ IL++Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DVYGDEFEALYERYEKEGRGRKTIKAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+I+YT+P E AVCNLAS+ALP +V +RG +
Sbjct: 421 GTIRSSNLCTEIIEYTAPDEVAVCNLASLALPTFVD--------------AARGE----Y 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL EV ++ NLNKIID+NYYPV A+ SN+RHRPI +GV GLAD F+ L +PFDS
Sbjct: 463 DFGKLHEVVQVLVRNLNKIIDINYYPVPEAKNSNMRHRPIALGVNGLADAFLALRLPFDS 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+QLN IFETIY+ AL SS++A G YE+Y GSPVS+GILQ DMW P+D WDW
Sbjct: 523 PEAKQLNTQIFETIYHGALTASSDLAKDFGTYESYEGSPVSQGILQYDMWDRTPTDLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I++ GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 DALKAKIAQTGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++GLWS +KN+II + GSVQ IP IP ++KA+YKTVWEI Q++++ MA DRG Y
Sbjct: 643 LKDLVDLGLWSDNMKNRIIAEGGSVQNIPNIPADIKALYKTVWEISQRSILQMAADRGAY 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
ID SQSLNIH+ +P GK+TS+HF W GLKTGMYYLR+ AA+ I+FTVD LK
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFAGWKMGLKTGMYYLRTMAASAPIQFTVDQEALK 759
>gi|258566183|ref|XP_002583836.1| ribonucleoside-diphosphate reductase large chain 1 [Uncinocarpus
reesii 1704]
gi|237907537|gb|EEP81938.1| ribonucleoside-diphosphate reductase large chain 1 [Uncinocarpus
reesii 1704]
Length = 884
Score = 1120 bits (2896), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/777 (66%), Positives = 628/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG++E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK FS I D+Y++ N ++ AP+I+
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSSVIDDLYHYVNPKNNRPAPMISQKT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+I+MK++ L+S I+YDRDF+Y YFGFKTLERSYLL++ GKV ERPQHM+MRVAVGIH
Sbjct: 121 YEIVMKHSEELNSAIVYDRDFNYQYFGFKTLERSYLLRINGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDI+ AI+TY++MSQ++FTHASPTLFNAGTP+ Q++SCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 DDIEKAIETYNLMSQKYFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATGSYI GTNG+SNGI+PMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIAGTNGSSNGIIPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWH+D+FEFLDLRKNHGKEE RARDLF ALW PDLFM+RV+ NG W+LFCPNEAPGLA
Sbjct: 301 IEPWHSDVFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNGDWTLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LY +YEKEG+ +K ++AQ LW+ IL++Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DVYGDEFEALYEQYEKEGRGRKTIKAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+I+YT+P E AVCNLAS+ALP YV + RG +
Sbjct: 421 GTIRSSNLCTEIIEYTAPDEVAVCNLASLALPTYVDPV--------------RGE----Y 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL EVT ++ NLNKIID N+YPV AR+SN RHRPI +GVQGLAD F+ L +PFDS
Sbjct: 463 DFGKLHEVTQVLIRNLNKIIDGNHYPVPEARKSNFRHRPIAVGVQGLADAFLALRLPFDS 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+QLN IFETIY+ +L S ++A +GPYETY GSPVS+GILQ DMW V PSD WDW
Sbjct: 523 PEARQLNTQIFETIYHASLTASCDLAKIDGPYETYEGSPVSQGILQYDMWNVTPSDLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+K+GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 DSLKKEIAKHGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++GLWS +KN+II + GS+Q IP IP ++KA+YKTVWEI Q+T+V MA DRG +
Sbjct: 643 LKDLVDLGLWSDNMKNRIIAEGGSIQNIPNIPADIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
ID SQSLNIH+ +P GK+TS+HF W GLKTGMYYLR+ AA+ I+FTVD LK
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEQLK 759
>gi|116200095|ref|XP_001225859.1| ribonucleoside-diphosphate reductase large chain [Chaetomium
globosum CBS 148.51]
gi|88179482|gb|EAQ86950.1| ribonucleoside-diphosphate reductase large chain [Chaetomium
globosum CBS 148.51]
Length = 912
Score = 1119 bits (2895), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/778 (66%), Positives = 629/778 (80%), Gaps = 20/778 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG+QE V FDKITAR+ +L YGL ++H DPV ++QKV +GVY GVTT+QLD+LA
Sbjct: 1 MYVRKRDGRQERVQFDKITARVSRLCYGLDVDHVDPVAITQKVISGVYGGVTTAQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK +S + D+Y++ N ++ +P+IA +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSAVVSDLYHYVNPKNERASPMIAKET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+ +M++ LDS I+YDRDF+Y YFGFKTLERSYLLK+ GK+VERPQHM+MRVAVGI
Sbjct: 121 YECVMRHKEELDSAIVYDRDFNYQYFGFKTLERSYLLKLNGKIVERPQHMIMRVAVGIWG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D+++ I+TY++MS ++FTHASPTLFNAGTP+AQLSSCFLV MKDDSIEGIYD+LK CA+
Sbjct: 181 DNVERVIETYNLMSSKFFTHASPTLFNAGTPQAQLSSCFLVDMKDDSIEGIYDSLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+++H IRATGSYI GTNGTSNGI+PMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKMAGGIGLNIHRIRATGSYIAGTNGTSNGIIPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+FEFLDLRKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+L CPNE PGLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNGEWTLMCPNECPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EFE LY KYEK G+ +K ++AQ LW+ IL++Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DCYGDEFEALYEKYEKAGRGRKTIKAQKLWYAILEAQTETGNPFMLYKDHCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVR-EMGVPMESHPSKLVGSRGSKNRY 479
GTI+SSNLCTE+I+Y++P E AVCNLAS+ALP++V GV
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASLALPQFVDYNQGV------------------- 461
Query: 480 FDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFD 539
+DF+KL EV +V NLNKIIDVN+YPV+ A SN+RHRPIG+GVQGLAD F+ L MPF+
Sbjct: 462 YDFQKLHEVAQVVVRNLNKIIDVNHYPVQEAYNSNMRHRPIGVGVQGLADAFLALRMPFE 521
Query: 540 STEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWD 599
S EA++LNK IFETIY+ AL S ++A +G Y TY GSPVS+GILQ DMW V P+ WD
Sbjct: 522 SPEARELNKQIFETIYHAALTASCDLAKEQGTYSTYEGSPVSQGILQYDMWNVTPTGLWD 581
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L+ I ++GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN
Sbjct: 582 WDALKAKIKEHGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPW 641
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL DL +MGLWS +KN+II D GS+Q IP IP ++KA+YKTVWEI Q+T+V MA DRG
Sbjct: 642 LLKDLVDMGLWSDNMKNRIIADGGSIQNIPNIPTDIKALYKTVWEISQRTVVQMAADRGA 701
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
+ID SQSLNIHM +P+ GK+TS+HF W GLKTGMYYLR++AAA I+FTVD L+
Sbjct: 702 FIDQSQSLNIHMREPSMGKITSMHFTGWKLGLKTGMYYLRTQAAAQPIQFTVDQEALR 759
>gi|395330811|gb|EJF63193.1| ribonucleotide reductase alpha subunit [Dichomitus squalens
LYAD-421 SS1]
Length = 894
Score = 1119 bits (2895), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/782 (66%), Positives = 632/782 (80%), Gaps = 20/782 (2%)
Query: 2 YVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAA 61
YV KR ++E V FDKITAR+ KL YGL +H DP+ V+QKV GVY GVTT +LD LAA
Sbjct: 3 YVFKRGRRKERVQFDKITARIAKLCYGLDKDHVDPIGVAQKVIAGVYAGVTTVELDNLAA 62
Query: 62 ETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVY 121
ETAA +TT HPDYA LAARI VSNLHK TKK+FS I D+Y++ N ++G A LI+ ++Y
Sbjct: 63 ETAAYLTTKHPDYAILAARIAVSNLHKETKKNFSAVISDLYHYVNPKNGKPAGLISKEIY 122
Query: 122 DIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKD 181
+++ NA LDS IIYDRDF+Y++FGFKTLERSYLLK+ G+V ERPQH+LMRVAVGIH
Sbjct: 123 EVVQANAEVLDSAIIYDRDFNYNFFGFKTLERSYLLKLNGRVAERPQHLLMRVAVGIHGA 182
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAII 241
DI+ A++TY++MS+R+FTHASPTLFNAGTP Q+SSCFLVCMKDDSIEGIY TLK+CA+I
Sbjct: 183 DIERALQTYNLMSERYFTHASPTLFNAGTPNPQMSSCFLVCMKDDSIEGIYSTLKDCAMI 242
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SK+AGGIG+++HNIRATGSYI GTNG SNGIVPMLRV++ TARYVDQGG KR GAFA+YL
Sbjct: 243 SKTAGGIGLNIHNIRATGSYIAGTNGYSNGIVPMLRVYDATARYVDQGGNKRPGAFAIYL 302
Query: 302 EPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLAD 361
EPWHAD+FEFLDLRKNHGKEE RARDLFYALW PDLFM+RV+S G WSLFCP+EAPGL +
Sbjct: 303 EPWHADVFEFLDLRKNHGKEEVRARDLFYALWTPDLFMKRVESGGKWSLFCPSEAPGLHE 362
Query: 362 CWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG 421
WG EFE LY +YE+EG+A+K + AQ LW+ IL+SQIETG P+ML+KD N+KSNQQNLG
Sbjct: 363 VWGEEFEALYEQYEREGRARKTIDAQKLWYAILESQIETGGPFMLYKDAANRKSNQQNLG 422
Query: 422 TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFD 481
TIKSSNLCTE+I+Y++P ETAVCNLASIALP ++ +N ++
Sbjct: 423 TIKSSNLCTEIIEYSAPDETAVCNLASIALPSFI--------------------ENGKYN 462
Query: 482 FEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDST 541
F+KL +V +V NLN+IIDVNYYP+ ARRSN+RHRPIGIGVQGLAD F+ L MPFDS
Sbjct: 463 FQKLHDVAKVVAFNLNRIIDVNYYPIPEARRSNMRHRPIGIGVQGLADAFMALRMPFDSV 522
Query: 542 EAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWG 601
EA+ LN I ETIY+ A+ S E+A ++GPYETY GSP S+G LQ D+WGV P+D WDW
Sbjct: 523 EARLLNLQIAETIYHAAVEASCEMAQKDGPYETYQGSPASQGKLQYDLWGVTPTDLWDWA 582
Query: 602 GLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
L+ ++++G+RNSLL+APMPTASTSQILGNNECFEPYTSNIY+RRVL+GEF VV LL
Sbjct: 583 SLKAKVAQHGLRNSLLIAPMPTASTSQILGNNECFEPYTSNIYTRRVLAGEFQVVCPWLL 642
Query: 662 HDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYI 721
+L E+GLW+ +KN II ++GSVQ I IPE++KAIYKTVWEI QK ++D+A DRG +I
Sbjct: 643 RELVELGLWNDDMKNMIIANNGSVQNIDIIPEDVKAIYKTVWEISQKKVLDLAADRGAFI 702
Query: 722 DHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPK 781
SQSLN+H+ P G+LTS+HF+ W +GLKTGMYYLR+R AA AIKFTVD+S LK K
Sbjct: 703 CQSQSLNVHLQSPTNGQLTSMHFYGWKKGLKTGMYYLRTRPAAQAIKFTVDSSYLKNAAK 762
Query: 782 VT 783
T
Sbjct: 763 KT 764
>gi|395814934|ref|XP_003780992.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
[Otolemur garnettii]
Length = 792
Score = 1119 bits (2895), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 536/811 (66%), Positives = 653/811 (80%), Gaps = 22/811 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG+QE V FDKIT+R++KL YGL+++ DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT HPDYA LAARI VSNLHK TKK FS+ ++D++N+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLFNYINPHNGKHSPMVAKST 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI++ N RL+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRV+VGIH+
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+AI+TY+++S+RWFTHASPTLFNAGT R QLSSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV++N WSL CPNE PGL
Sbjct: 301 LEPWHADIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE+LY YEK+G +KVV+AQ LW+ I++SQ ETGTPYML+KD+CN+KSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQGHVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTEV++YTS E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEVVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EVT ++ NLNKIID+NYYPV A SN RHRPIGIGVQGLAD FIL+ PF+S
Sbjct: 462 DFKKLNEVTKVIVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S ++A GPYETY GSPVSKGILQ DMW V P+D WDW
Sbjct: 522 AEAQLLNKQIFETIYYGALEASCDLAKEHGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 NLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE GLW+ +KN+II +GS+Q IP+IP++LK +YKTVWEI QKT++ MA +RG +
Sbjct: 642 LKDLTERGLWNEKMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLTMAAERGAF 701
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR+R AA+ I+FT++ LK+
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 KVTDDDDA---KMAQMVCSLTNREECMACGS 808
K++ +++ A MVCSL NR+EC+ CGS
Sbjct: 762 KLSKEEEEKERNTAAMVCSLENRDECLMCGS 792
>gi|73988079|ref|XP_534027.2| PREDICTED: ribonucleoside-diphosphate reductase large subunit
isoform 1 [Canis lupus familiaris]
Length = 792
Score = 1119 bits (2894), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/811 (65%), Positives = 652/811 (80%), Gaps = 22/811 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG+QE V FDKIT+R++KL YGL+++ DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT HPDYA LAARI VSNLHK TKK FS+ ++D+YN+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGRHSPMVAKST 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI++ N RL+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRV+VGIH+
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHE 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+AI+TY+++S++WFTHASPTLFNAGT R QLSSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV++N WSL CPNE PGL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE+LY YEK+G+ +KVV+AQ LW+ I++SQ ETGTPYML+KD+CN+KSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YTS E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLAEVT ++ NLNKIID+NYYPV A SN RHRPIGIGVQGLAD FIL+ PF+S
Sbjct: 462 DFKKLAEVTKVIVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S ++A GPYETY GSPVS+GILQ DMW V P++ WDW
Sbjct: 522 PEAQLLNKQIFETIYYGALEASCDLAKEHGPYETYEGSPVSRGILQYDMWNVTPTELWDW 581
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K GVRNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 KLLKEKIAKYGVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE GLW+ +KN+II +GS+Q IP+IP++LK +YKTVWEI QK ++ MA +RG +
Sbjct: 642 LKDLTERGLWNEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKIVLKMAAERGAF 701
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR+R AA+ I+FT++ LK+
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 KVTDDDDA---KMAQMVCSLTNREECMACGS 808
K T +++ A MVCSL NREEC+ CGS
Sbjct: 762 KATKEEEEKERNTAAMVCSLENREECLMCGS 792
>gi|402894482|ref|XP_003910385.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
isoform 1 [Papio anubis]
Length = 792
Score = 1119 bits (2894), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 536/811 (66%), Positives = 651/811 (80%), Gaps = 22/811 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG+QE V FDKIT+R++KL YGL+++ DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT HPDYA LAARI VSNLHK TKK FS+ ++D+YN+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKST 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI++ N RL+S IIYDRDF Y+YFGFK RSYLLK+ GKV ERPQHMLMRV+VGIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKVXXRSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+AI+TY+++S+RWFTHASPTLFNAGT R QLSSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV++N WSL CPNE PGL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE+LY YEK+G+ +KVV+AQ LW+ I++SQ ETGTPYML+KD+CN+KSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YTS E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLAEVT +V NLNKIID+NYYPV A SN RHRPIGIGVQGLAD FIL+ PF+S
Sbjct: 462 DFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S ++A +GPYETY GSPVSKGILQ DMW V P+D WDW
Sbjct: 522 AEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 NLLKENIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE GLW +KN+II +GS+Q IP+IP++LK +YKTVWEI QKT++ MA +RG +
Sbjct: 642 LKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR+R AA+ I+FT++ LK+
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 KVTDDDDA---KMAQMVCSLTNREECMACGS 808
KV+ +++ A MVCSL NR+EC+ CGS
Sbjct: 762 KVSKEEEEKERNTAAMVCSLENRDECLMCGS 792
>gi|403262126|ref|XP_003923446.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
isoform 1 [Saimiri boliviensis boliviensis]
Length = 792
Score = 1119 bits (2894), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/811 (65%), Positives = 652/811 (80%), Gaps = 22/811 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG+QE V FDKIT+R++KL YGL+++ DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT HPDYA LAARI VSNLHK TKK FS+ ++D+YN+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKST 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI++ N RL+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRV+VGIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+AI+TY+++S+RWFTHASPTLFNAGT R QLSSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV++N WSL CPNE PGL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE+LY YEK+ + +KVV+AQ LW+ I++SQ ETGTPYML+KD+CN+KSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQRRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YTS E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLAEVT ++ NLNKIID+NYYPV A SN RHRPIGIGVQGLAD FIL+ PF+S
Sbjct: 462 DFQKLAEVTKVIVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S ++A GPYETY GSPVSKGILQ DMW V P+D WDW
Sbjct: 522 AEAQLLNKQIFETIYYGALEASCDLAKEHGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 KLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE GLW +KN+II +GS+Q IP+IP++LK +YKTVWEI QKT++ MA +RG +
Sbjct: 642 LKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR+R AA+ I+FT++ +K+
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKIKDKE 761
Query: 781 KVTDDDDA---KMAQMVCSLTNREECMACGS 808
K++ +++ A MVCSL NR+EC+ CGS
Sbjct: 762 KISKEEEEKERNTAAMVCSLENRDECLMCGS 792
>gi|291384376|ref|XP_002708776.1| PREDICTED: ribonucleoside-diphosphate reductase M1 chain
[Oryctolagus cuniculus]
Length = 792
Score = 1118 bits (2893), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 536/811 (66%), Positives = 652/811 (80%), Gaps = 22/811 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG+QE V FDKIT+R++KL YGL+++ DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT HPDYA LAARI VSNLHK TKK FS+ ++D+Y++ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYSYINPHNGKHSPMVAKST 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI++ N RL+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRV+VGIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+AI+TY+++S+RWFTHASPTLFNAGT R QLSSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV++N WSL CPNE PGL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE+LY YEK+G+ +KVV+AQ LW+ I++SQ ETGTPYML+KD+CN+KSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTEV++YTS E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEVVEYTSKDEVAVCNLASLALNMYV-------------------TPEHTY 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLAEVT ++ NLNKIID+NYYPV A SN RHRPIGIGVQGLAD FIL+ PF+S
Sbjct: 462 DFKKLAEVTKVIVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S ++A GPYETY G PVSKGILQ DMW V P+D WDW
Sbjct: 522 PEAQLLNKQIFETIYYGALEASCDLAKEHGPYETYEGCPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 KLLKEKIAKYGIRNSLLLAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE GLW+ +KN+II +GS+Q IP+IP++LK +YKTVWEI QKT++ MA +RG +
Sbjct: 642 LKDLTERGLWNEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR+R AA+ I+FT++ LK+
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 KVTDDDDA---KMAQMVCSLTNREECMACGS 808
K + +++ A MVCSL NR+EC+ CGS
Sbjct: 762 KASKEEEEKERNTAAMVCSLENRDECLMCGS 792
>gi|225560468|gb|EEH08749.1| ribonucleoside-diphosphate reductase subunit large [Ajellomyces
capsulatus G186AR]
Length = 881
Score = 1118 bits (2893), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/790 (66%), Positives = 630/790 (79%), Gaps = 22/790 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG++E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA+LAARI VSNLHK TKK FS I D+Y+++N ++ AP+I+
Sbjct: 61 AETAAYMTVTHPDYATLAARIAVSNLHKQTKKQFSSVIDDLYHYHNPKNQRPAPMISQTT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+ +M++A +S I+YDRDF+Y YFGFKTLERSYLL++ GKV ERPQHM+MRVAVGIH
Sbjct: 121 YETVMRHADEFNSAIVYDRDFNYQYFGFKTLERSYLLRINGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD++ I+TY++MSQ++FTHASPTLFNAGTP+ Q++SCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 DDVERVIETYNLMSQKFFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+++H IR TGSYI GTNG+SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNIHRIRGTGSYIAGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIFEFLDLRKNHGKEE RARDLF ALW PDLFM+RV+ N W+LFCPNEAPGLA
Sbjct: 301 LEPWHTDIFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEQNSEWTLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LY KYEKEG+ KK V+AQ LW+ IL++Q ETG P+ML+KD+CN+KSNQ+NL
Sbjct: 361 DVYGDEFEALYEKYEKEGRGKKTVKAQKLWYAILEAQTETGNPFMLYKDSCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+I+Y SP E AVCNLASIALP +V + RG +
Sbjct: 421 GTIRSSNLCTEIIEYCSPDEVAVCNLASIALPTFVDPI--------------RGE----Y 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL EVT +V NLNKIID NYYPVE A+RSN RHRPI GVQGLAD F+ L +PFDS
Sbjct: 463 DFGKLHEVTQVVVRNLNKIIDRNYYPVEEAKRSNFRHRPIACGVQGLADAFLALRLPFDS 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+QLN IFETIY+ L S E+A +GPY TY GSPVS+GILQ DMW V P+D WDW
Sbjct: 523 PEAKQLNIQIFETIYHAGLTASCELAKIDGPYSTYEGSPVSQGILQYDMWNVTPTDLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+K+GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF +VN L
Sbjct: 583 DSLKQDIAKHGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQIVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL +MGLWS +KN+II + GS+Q IP IP+++KA+YKTVWEI Q+T+V MA DRG +
Sbjct: 643 LKDLVDMGLWSDNMKNRIIAEGGSIQNIPNIPQDIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +P GK+TS+HF W GLKTGMYYLR+ AA+ I+FTVD +E
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFTGWKLGLKTGMYYLRTMAASAPIQFTVD----QEQL 758
Query: 781 KVTDDDDAKM 790
KV D + A++
Sbjct: 759 KVADTNVARV 768
>gi|327351615|gb|EGE80472.1| ribonucleoside-diphosphate reductase [Ajellomyces dermatitidis ATCC
18188]
Length = 886
Score = 1118 bits (2893), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/790 (66%), Positives = 630/790 (79%), Gaps = 22/790 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG++E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK FS I D+Y+++N ++ AP+I+
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSSVIDDLYHYHNPKNQRPAPMISQGT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+ +M++A +S I+YDRDF+Y YFGFKTLERSYLL++ GKV ERPQHM+MRVAVGIH
Sbjct: 121 YETVMRHADEFNSAIVYDRDFNYQYFGFKTLERSYLLRINGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD++ I+TY++MSQ++FTHASPTLFNAGTP+ Q++SCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 DDVEKVIETYNLMSQKFFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+++H IR TGSYI GTNG+SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNIHRIRGTGSYIAGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIFEFLDLRKNHGKEE RARDLF ALW PDLFM+RV+ NG W+LFCPNEAPGLA
Sbjct: 301 LEPWHTDIFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNGEWTLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EF+ LY KYEKEG+ KK ++AQ LW+ IL++Q ETG P+ML+KD CNKKSNQ+NL
Sbjct: 361 DVYGEEFDALYEKYEKEGRGKKTIKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+I+Y SP E AVCNLASIALP +V + RG +
Sbjct: 421 GTIRSSNLCTEIIEYCSPDEVAVCNLASIALPTFVDPV--------------RGE----Y 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL EVT +V NLNKIID NYYPVE A+RSN RHRPI GVQGLAD F+ L +PF+S
Sbjct: 463 DFGKLHEVTQVVVRNLNKIIDGNYYPVEEAKRSNFRHRPIACGVQGLADAFLALRLPFES 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+QLN IFETIY+ +L S E+A +GPY TY GSPVS+GILQ DMW V P+D WDW
Sbjct: 523 PEAKQLNIQIFETIYHASLTASCELAKIDGPYSTYEGSPVSQGILQYDMWNVTPTDLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+K+GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF +VN L
Sbjct: 583 DSLKQDIAKHGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQIVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL +MGLWS +KN+II D GS+Q IP IP+++KA+YKTVWEI Q+T+V MA DRG +
Sbjct: 643 LKDLVDMGLWSDNMKNRIIADGGSIQNIPNIPQDIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +P GK+TS+HF W GLKTGMYYLR+ AA+ I+FTVD +E
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFTGWKLGLKTGMYYLRTMAASAPIQFTVD----QEQL 758
Query: 781 KVTDDDDAKM 790
KV D + A++
Sbjct: 759 KVADTNVARV 768
>gi|348538826|ref|XP_003456891.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Oreochromis niloticus]
Length = 793
Score = 1118 bits (2893), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/812 (65%), Positives = 656/812 (80%), Gaps = 23/812 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG++EAV FDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRREAVSFDKITSRVQKLCYGLNSDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT HPDYA LAARI VSNLHK TKK FS+ ++D+YN+ N + +P+I+ +
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPLNKRHSPMISKET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
D++++N ARL+S IIYDRDF Y++FGFKTLERSYLLK+ GKV ERPQHMLMRV+VGIHK
Sbjct: 121 LDVVLENKARLNSSIIYDRDFSYNFFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DID+AI+TY+++S++WFTHASPTLFNAGT + Q+SSCFL+ M DDSI+GIYDTLK+CA+
Sbjct: 181 GDIDAAIETYNLLSEKWFTHASPTLFNAGTNKPQMSSCFLLAMMDDSIDGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++V IRATGSYI GTNGTSNG+VPMLRV+N+TARYVDQGG KR GAFAVY
Sbjct: 241 ISKSAGGIGLAVSCIRATGSYIAGTNGTSNGLVPMLRVYNNTARYVDQGGNKRPGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH D+FEFL+L+KN GKEE RARDLF+ALW+PDLFM+RV++N WSL CP+E PGL
Sbjct: 301 LEPWHFDVFEFLELKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPSECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+CWG EFE LYT+YEKEG+AK+VV+AQ LW+ I++SQ ETGTPYML+KD CN+KSNQQNL
Sbjct: 361 ECWGEEFEELYTRYEKEGRAKRVVKAQQLWYAIIESQTETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+++YTS E AVCNLASIAL YV + + +
Sbjct: 421 GTIKSSNLCTEIVEYTSKDEVAVCNLASIALNMYV-------------------TPEKTY 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLA VT ++ +NLNKIID+NYYPV A RSN RHRPIGIGVQGLAD FIL+ PF+S
Sbjct: 462 DFKKLASVTKVIVKNLNKIIDINYYPVPEAERSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LN IFETIYY AL S E+AA GPYETY GSPVSKGILQ +MW P+D WDW
Sbjct: 522 PEAQLLNIQIFETIYYAALEASCELAAELGPYETYPGSPVSKGILQYEMWNKTPTDLWDW 581
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K+GVRNSLL+APMPTAST+QILGNNE E YTSNIY+RRVLSGEF +VN HL
Sbjct: 582 KVLKEKIAKHGVRNSLLLAPMPTASTAQILGNNESIEAYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE GLW+ +KN++I +GS+Q I IP++LK +YKTVWEI QKT++ MA DRG Y
Sbjct: 642 LKDLTERGLWNEDMKNQLIAHNGSIQNIDDIPDDLKQLYKTVWEISQKTVLKMAADRGTY 701
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE-- 778
ID SQSLNIH+ +PN+GKL+S+HF+ W GLKTGMYYLR++ AA+ I+FT++ LKE
Sbjct: 702 IDQSQSLNIHIAEPNYGKLSSMHFYGWKLGLKTGMYYLRTKPAANPIQFTLNKEKLKEAQ 761
Query: 779 NPKVTDDD--DAKMAQMVCSLTNREECMACGS 808
+ K +++ + A MVCSL N++EC+ CGS
Sbjct: 762 SAKSVEEETRERNTAAMVCSLANKDECLMCGS 793
>gi|402076101|gb|EJT71524.1| ribonucleoside-diphosphate reductase large subunit [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 920
Score = 1118 bits (2893), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/778 (66%), Positives = 627/778 (80%), Gaps = 20/778 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG++E V FDKITAR+ +L YGL + H DPV ++QKV +GVY GVTT QLD+LA
Sbjct: 1 MFVRKRDGREERVQFDKITARVSRLCYGLDLNHVDPVKITQKVISGVYGGVTTVQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK FS I D++++ N ++G +P+IA +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSSVISDLFHYVNPKNGRLSPMIAQET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YD +M++ A DS I+YDRDF+Y YFGFKTLERSYLLK+ GK+VERPQHM+MRVAVGI
Sbjct: 121 YDCVMRHKAEFDSAIVYDRDFNYQYFGFKTLERSYLLKLDGKIVERPQHMIMRVAVGIWG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D+++ +TY++MS ++FTHASPTLFNAGTP+AQLSSCFLV MKDDSI+GIYDTLK CA+
Sbjct: 181 DNLERVFETYNLMSSKYFTHASPTLFNAGTPQAQLSSCFLVDMKDDSIDGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+++H IRATGSYI GTNGTSNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKMAGGIGLNIHRIRATGSYIAGTNGTSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+FEFLDLRKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+L CPNE PGLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEIRARDLFLALWIPDLFMKRVEKNGDWTLMCPNECPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EFE LY KYE+ GK +K ++AQ LW+ IL++Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DCYGDEFEALYEKYERAGKGRKTLKAQKLWYAILEAQTETGNPFMLYKDHCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVR-EMGVPMESHPSKLVGSRGSKNRY 479
GTI+SSNLCTE+I+Y++P E AVCNLAS+ALP+++ GV
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASLALPQFIDYNEGV------------------- 461
Query: 480 FDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFD 539
+DF+KL +VT +V NLNKIIDVNYYPV+ AR SN+RHRPIG+GVQGLAD F+ L +PF+
Sbjct: 462 YDFQKLHKVTQVVVRNLNKIIDVNYYPVQEARNSNMRHRPIGLGVQGLADAFLALRLPFE 521
Query: 540 STEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWD 599
S EA++LNK IFETIY+ L S E+A +G Y TY GSPVS+GILQ DMW V PS+ WD
Sbjct: 522 SPEARELNKQIFETIYHAGLTASCELAREQGTYSTYEGSPVSQGILQYDMWNVKPSELWD 581
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W GL+ I ++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN
Sbjct: 582 WEGLKADIKQHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPW 641
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL DL E+GLWS +KN+II + GS+Q I IPE+ K +YKTVWEI Q+T+V MA DRG
Sbjct: 642 LLKDLVELGLWSDDMKNRIIAEGGSIQNIASIPEDTKRLYKTVWEISQRTVVQMAADRGA 701
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
+ID SQSLNIHM +P GK+TS+HF W GLKTGMYYLR++AAA I+FTVD L+
Sbjct: 702 FIDQSQSLNIHMREPTMGKITSMHFAGWKLGLKTGMYYLRTQAAAQPIQFTVDQEALR 759
>gi|336275156|ref|XP_003352331.1| heterokaryon incompatibility protein [Sordaria macrospora k-hell]
gi|380088434|emb|CCC13588.1| putative heterokaryon incompatibility protein [Sordaria macrospora
k-hell]
Length = 937
Score = 1118 bits (2893), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 525/788 (66%), Positives = 627/788 (79%), Gaps = 22/788 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG+QE V FDKITAR+ +L YGL + H DPV ++QKV +GVY GVTT+QLD+LA
Sbjct: 1 MYVKKRDGRQERVQFDKITARVSRLCYGLDMNHVDPVAITQKVISGVYGGVTTAQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK +S I ++YN+ N ++G +P+IA D
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSLVINELYNYVNPKTGKHSPMIAKDT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+ +M++ DS I+YDRDF+Y YFGFKTLERSYLLK+ G++ ERPQHM+MRVAVGI
Sbjct: 121 YECVMRHKDEFDSAIVYDRDFNYQYFGFKTLERSYLLKLDGQIAERPQHMIMRVAVGIWG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD++ I+TY++MS + FTHASPTLFNAGTP+AQLSSCFLV MK+DSIEGIYDTLK CA+
Sbjct: 181 DDVERVIETYNLMSLKTFTHASPTLFNAGTPQAQLSSCFLVDMKEDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+++H IRATGSYI GTNGTSNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKMAGGIGLNIHRIRATGSYIAGTNGTSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+FEFLDLRKNHGKEE RARDLF ALW+PDLFM+R++ NG W+L CP+E PGLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRIEQNGTWTLMCPHECPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LY KYEKEGK +K V+AQ LW+ IL++Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DVYGDEFEALYEKYEKEGKGRKTVKAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+I+Y++P E AVCNLAS+AL +V +N +
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASLALAAFV------------------DYENASY 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EVT +V NLNKIIDVN+YPV A SN+RHRPIG+GVQGLAD F+ L MPFDS
Sbjct: 463 DFKKLHEVTQVVVRNLNKIIDVNHYPVMEAHNSNMRHRPIGVGVQGLADAFLALRMPFDS 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LN IFETIY+ AL S ++A +G Y TY GSPVS+GILQ DMW V PS+ WDW
Sbjct: 523 PEARKLNIQIFETIYHAALTASCQLAKEQGTYSTYEGSPVSQGILQYDMWNVTPSNLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I K+GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 AALKADIKKHGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL EMGLWS +KN+II + GS+Q I IP+++KA+YKTVWEI Q+T+V MA DRG +
Sbjct: 643 LRDLVEMGLWSDNMKNRIIAEGGSIQNIASIPQDIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIHM +P GK+TS+HF W GLKTGMYYLR++AAA I+FTVD L
Sbjct: 703 IDQSQSLNIHMREPTMGKITSMHFAGWKMGLKTGMYYLRTQAAAQPIQFTVDQEAL---- 758
Query: 781 KVTDDDDA 788
K TDD A
Sbjct: 759 KATDDQVA 766
>gi|295659650|ref|XP_002790383.1| ribonucleoside-diphosphate reductase large chain [Paracoccidioides
sp. 'lutzii' Pb01]
gi|226281835|gb|EEH37401.1| ribonucleoside-diphosphate reductase large chain [Paracoccidioides
sp. 'lutzii' Pb01]
Length = 878
Score = 1118 bits (2893), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/790 (66%), Positives = 630/790 (79%), Gaps = 22/790 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG++E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK FS I D+Y+++N ++ AP+I+
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSSVIDDLYHYHNPKNRRPAPMISQST 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+I+M++A +S I+YDRDF+Y YFGFKTLERSYLL++ GKV ERPQHM+MRVA+GIH
Sbjct: 121 YEIVMRHADEFNSAIVYDRDFNYQYFGFKTLERSYLLRINGKVAERPQHMIMRVAIGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD++ I+TY++MSQ++FTHASPTLFNAGTP+ Q++SCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 DDVERVIETYNLMSQKYFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+++H IR TGSYI GTNG+SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNIHRIRGTGSYIAGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIFEFLDLRKNHGKEE RARDLF ALW PDLFM+RV+ NG W+LFCPNEAPGLA
Sbjct: 301 LEPWHTDIFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNGEWTLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LY KYEKEG+ KK ++AQ LW+ IL++Q ETG P+ML+KD CNKKSNQ+NL
Sbjct: 361 DVYGDEFEALYEKYEKEGRGKKTIKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+I+Y SP E AVCNLASIALP +V + RG +
Sbjct: 421 GTIRSSNLCTEIIEYCSPDEVAVCNLASIALPTFVDAV--------------RGE----Y 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL EVT +V NLN+IID NYYPVE A+RSN RHRPI GVQGLAD F+ L +PFDS
Sbjct: 463 DFGKLHEVTQVVVRNLNRIIDRNYYPVEEAKRSNFRHRPIACGVQGLADAFLALRLPFDS 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+ LN IFETIY+ L S E+A +GPY +Y GSPVS+GILQ DMWGV P+D WDW
Sbjct: 523 PEAKLLNIQIFETIYHACLTASCELAKVDGPYSSYEGSPVSQGILQYDMWGVTPTDLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+K+GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF +VN L
Sbjct: 583 DSLKQEIAKHGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQIVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++GLWS +KN+II D GS+Q IP IP+++KA+YKTVWEI Q+T+V MA DRG +
Sbjct: 643 LKDLVDLGLWSDNMKNRIIADGGSIQNIPNIPQDIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +P GK+TS+HF W GLKTGMYYLR+ AA+ I+FTVD +E
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFTGWKLGLKTGMYYLRTMAASAPIQFTVD----QEQL 758
Query: 781 KVTDDDDAKM 790
KV D + A++
Sbjct: 759 KVADTNVARV 768
>gi|261197195|ref|XP_002625000.1| ribonucleotide reductase large subunit Rnr1 [Ajellomyces
dermatitidis SLH14081]
gi|239595630|gb|EEQ78211.1| ribonucleotide reductase large subunit Rnr1 [Ajellomyces
dermatitidis SLH14081]
gi|239606620|gb|EEQ83607.1| ribonucleotide reductase large subunit Rnr1 [Ajellomyces
dermatitidis ER-3]
Length = 886
Score = 1118 bits (2892), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/790 (66%), Positives = 630/790 (79%), Gaps = 22/790 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG++E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK FS I D+Y+++N ++ AP+I+
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSSVIDDLYHYHNPKNQRPAPMISQGT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+ +M++A +S I+YDRDF+Y YFGFKTLERSYLL++ GKV ERPQHM+MRVAVGIH
Sbjct: 121 YETVMRHADEFNSAIVYDRDFNYQYFGFKTLERSYLLRINGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD++ I+TY++MSQ++FTHASPTLFNAGTP+ Q++SCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 DDVEKVIETYNLMSQKFFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+++H IR TGSYI GTNG+SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNIHRIRGTGSYIAGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIFEFLDLRKNHGKEE RARDLF ALW PDLFM+RV+ NG W+LFCPNEAPGLA
Sbjct: 301 LEPWHTDIFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNGEWTLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EF+ LY KYEKEG+ KK ++AQ LW+ IL++Q ETG P+ML+KD CNKKSNQ+NL
Sbjct: 361 DVYGEEFDALYEKYEKEGRGKKTIKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+I+Y SP E AVCNLASIALP +V + RG +
Sbjct: 421 GTIRSSNLCTEIIEYCSPDEVAVCNLASIALPTFVDPV--------------RGE----Y 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL EVT +V NLNKIID NYYPVE A+RSN RHRPI GVQGLAD F+ L +PF+S
Sbjct: 463 DFGKLHEVTQVVVRNLNKIIDGNYYPVEEAKRSNFRHRPIACGVQGLADAFLALRLPFES 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+QLN IFETIY+ +L S E+A +GPY TY GSPVS+GILQ DMW V P+D WDW
Sbjct: 523 PEAKQLNIQIFETIYHASLTASCELAKIDGPYSTYEGSPVSQGILQYDMWNVTPTDLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+K+GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF +VN L
Sbjct: 583 DSLKQDIAKHGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQIVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL +MGLWS +KN+II D GS+Q IP IP+++KA+YKTVWEI Q+T+V MA DRG +
Sbjct: 643 LKDLVDMGLWSDNMKNRIIADGGSIQNIPNIPQDIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +P GK+TS+HF W GLKTGMYYLR+ AA+ I+FTVD +E
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFTGWKLGLKTGMYYLRTMAASAPIQFTVD----QEQL 758
Query: 781 KVTDDDDAKM 790
KV D + A++
Sbjct: 759 KVADTNVARV 768
>gi|390596008|gb|EIN05411.1| hypothetical protein PUNSTDRAFT_107092 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 855
Score = 1118 bits (2891), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/776 (66%), Positives = 626/776 (80%), Gaps = 18/776 (2%)
Query: 2 YVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAA 61
YV KR G++E V FDKIT R+ KL YGL +H D V ++QKV +GVY GVTT +LD LAA
Sbjct: 3 YVFKRGGRKEIVQFDKITKRIAKLCYGLDTDHVDAVEIAQKVISGVYPGVTTIELDNLAA 62
Query: 62 ETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVY 121
ETAA +TT HPDYA LAARI VSNLHK TK FSE +KD+Y + N ++G A LI+ + Y
Sbjct: 63 ETAAYLTTKHPDYAILAARIAVSNLHKETKNKFSEVVKDLYEYVNPKTGKPAGLISQETY 122
Query: 122 DIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKD 181
DI+M NAA LDS ++Y+RDF Y++FGFKTLERSYLLK+ G+ ERPQH+LMRVAVGIH
Sbjct: 123 DIVMANAATLDSAVVYERDFQYNFFGFKTLERSYLLKLNGRPAERPQHLLMRVAVGIHGA 182
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAII 241
DI A++TY +MSQ++F H SPTLFNAGTPR QLSSC+L+ M+DDSIEGIYDTLK CA+I
Sbjct: 183 DIKRAVQTYDLMSQKYFNHGSPTLFNAGTPRPQLSSCYLLAMQDDSIEGIYDTLKNCAMI 242
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SK+AGGIG+ +HNIRATGSYI GTNG SNGIVPMLR F+ TARYVDQGG KR GAFA+YL
Sbjct: 243 SKTAGGIGLHIHNIRATGSYIAGTNGYSNGIVPMLRAFDSTARYVDQGGNKRPGAFAIYL 302
Query: 302 EPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLAD 361
EPWHADIFEF+DLRKNHGKEE RARDLFYALW+PDLFM+RV++NG WSLFCPNEAPGL +
Sbjct: 303 EPWHADIFEFIDLRKNHGKEEVRARDLFYALWIPDLFMKRVEANGDWSLFCPNEAPGLHE 362
Query: 362 CWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG 421
WG EFE L+ +YEKEG+AKK + AQ LW+ I+++QIETG P+ML+KD CN KSNQQNLG
Sbjct: 363 VWGPEFEALFERYEKEGRAKKTIPAQKLWYAIMEAQIETGGPFMLYKDACNSKSNQQNLG 422
Query: 422 TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFD 481
TIKSSNLCTE+I+Y+SP ETAVCNLAS+ALP +V + +D
Sbjct: 423 TIKSSNLCTEIIEYSSPEETAVCNLASMALPSFV------------------DMSTKTYD 464
Query: 482 FEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDST 541
F+KL EV +VT NLN++IDVN+YP+ +ARRSN+RHRP+G+GVQGLADTF++L MPFDS
Sbjct: 465 FKKLHEVAKVVTYNLNRVIDVNHYPIPSARRSNMRHRPVGLGVQGLADTFMMLRMPFDSP 524
Query: 542 EAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWG 601
A+QLNK IFET+Y+ AL SSEIA R+GPYET+ GSP +G LQ D+WGV P+D WDW
Sbjct: 525 AAKQLNKQIFETLYHAALEASSEIAERDGPYETWEGSPAQQGKLQYDLWGVTPTDLWDWK 584
Query: 602 GLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
L++ I++ G+RNSLL+APMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VV LL
Sbjct: 585 SLKEKITRTGLRNSLLLAPMPTASTSQILGFNECFEPYTSNIYTRRVLAGEFQVVCPWLL 644
Query: 662 HDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYI 721
+L E+ LW +KN II ++GS+Q I IP+++KAIYKTVWE+ QK ++DMA DRG +I
Sbjct: 645 RELVELKLWDDQMKNMIIANNGSIQSIIGIPDDVKAIYKTVWELSQKVVLDMAADRGAFI 704
Query: 722 DHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
SQSLN+H+ P G+LTS+HF+ W +GLKTGMYYLR+R AA+AI+FTVD VL+
Sbjct: 705 CQSQSLNVHLQAPTMGQLTSMHFYGWRKGLKTGMYYLRTRPAANAIQFTVDQKVLQ 760
>gi|392565961|gb|EIW59137.1| hypothetical protein TRAVEDRAFT_28460 [Trametes versicolor
FP-101664 SS1]
Length = 888
Score = 1117 bits (2890), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/786 (66%), Positives = 636/786 (80%), Gaps = 25/786 (3%)
Query: 2 YVVKRDG--KQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDEL 59
+V KR ++E V FDKITAR+ KL YGL +H DPV ++QKV GVY GVTT +LD L
Sbjct: 4 FVFKRGEHRRKERVQFDKITARIAKLCYGLDKDHVDPVGITQKVIAGVYPGVTTVELDNL 63
Query: 60 AAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADD 119
AAETAA +TT HPDYA LAARI VSNLHK TKKSFS I D+YN+ N ++G A +I+ +
Sbjct: 64 AAETAAYLTTKHPDYAILAARIAVSNLHKETKKSFSAVISDLYNYVNPKNGRAAGMISKE 123
Query: 120 VYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIH 179
+Y+I+ KNA LDS IIYDRDF Y++FGFKTLERSYLLK+ G+V ERPQH++MRVAVGIH
Sbjct: 124 IYEIVQKNAEVLDSAIIYDRDFSYNFFGFKTLERSYLLKINGRVAERPQHLIMRVAVGIH 183
Query: 180 KDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECA 239
DID AI+TYH+MS+R+FTHASPTLFNAGTP QLSSCFLV MKDDSIEGIY TLK+CA
Sbjct: 184 GADIDRAIETYHLMSERYFTHASPTLFNAGTPNPQLSSCFLVSMKDDSIEGIYSTLKDCA 243
Query: 240 IISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAV 299
ISK+AGGIG+++HNIRATGSYI GTNG SNGIVPMLRV++ TARYVDQGG KR GAFA+
Sbjct: 244 NISKTAGGIGINIHNIRATGSYIAGTNGYSNGIVPMLRVYDATARYVDQGGNKRPGAFAI 303
Query: 300 YLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGL 359
YLEPWHAD+FEF+DLRKNHGKEE RARDLFYALW+PDLFM+RV+S G WSLFCP+EAPGL
Sbjct: 304 YLEPWHADVFEFIDLRKNHGKEEVRARDLFYALWIPDLFMKRVESGGKWSLFCPSEAPGL 363
Query: 360 ADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQN 419
+ WG EFERLY +YE+EG+AKK ++AQ LW+ IL++QIETG P+ML+KD CN KSNQQN
Sbjct: 364 HEVWGEEFERLYEQYEREGRAKKTIEAQKLWYAILEAQIETGGPFMLYKDACNAKSNQQN 423
Query: 420 LGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRY 479
LGTIKSSNLCTE+++Y+SP ETAVCNLASIALP ++ +N
Sbjct: 424 LGTIKSSNLCTEIVEYSSPDETAVCNLASIALPSFI--------------------ENGK 463
Query: 480 FDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFD 539
++F+KL +VT +V NLN+IIDVN+YP+ A+RSN+RHRPIG+GVQGLAD F+ L MPFD
Sbjct: 464 YNFQKLHDVTKVVAFNLNRIIDVNHYPIPEAQRSNMRHRPIGVGVQGLADAFMALRMPFD 523
Query: 540 STEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWD 599
EA++LN+ IFETIY+ A+ S E+A + G YETY GSP S+G LQ D+WG+ P+D WD
Sbjct: 524 GVEARKLNQQIFETIYHAAVEASCEMAQQFGTYETYQGSPASEGKLQYDLWGITPTDLWD 583
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L+ ++++G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVL+GEF VV
Sbjct: 584 WTSLKAKVAQHGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLAGEFQVVCPW 643
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL +L E+GLW+ +KN II ++GS+Q I IP+++KAIYKTVWEI QK ++D+A DRG
Sbjct: 644 LLRELVELGLWNDDMKNMIIANNGSIQTIDIIPDDVKAIYKTVWEISQKKVLDLAADRGA 703
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK-- 777
+I SQSLN+H+ P G+LTS+HF+ W +GLKTGMYYLR+R AA AIKFTVD+S LK
Sbjct: 704 FICQSQSLNVHLQSPTTGQLTSMHFYGWKKGLKTGMYYLRTRPAAQAIKFTVDSSFLKNA 763
Query: 778 -ENPKV 782
+ PKV
Sbjct: 764 AKKPKV 769
>gi|296217186|ref|XP_002754895.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
isoform 1 [Callithrix jacchus]
Length = 792
Score = 1117 bits (2890), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/811 (65%), Positives = 652/811 (80%), Gaps = 22/811 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG+QE V FDKIT+R++KL YGL+++ DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT HPDYA LAARI VSNLHK TKK FS+ ++D+YN+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKST 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI++ N RL+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRV+VGIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+AI+TY+++S+RWFTHASPTLFNAGT R QLSSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV++N WSL CPNE PGL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE+LY YEK+ + +KVV+AQ LW+ I++SQ ETGTPYML+KD+CN+KSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQRRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YTS E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLAEVT ++ NLNKIID+NYYPV A SN RHRPIGIGVQGLAD FIL+ PF+S
Sbjct: 462 DFQKLAEVTKVIVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S ++A GPYETY GSPVS+GILQ DMW V P+D WDW
Sbjct: 522 AEAQLLNKQIFETIYYGALEASCDLAKEHGPYETYEGSPVSRGILQYDMWNVTPTDLWDW 581
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 KLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE GLW +KN+II +GS+Q IP+IP++LK +YKTVWEI QKT++ MA +RG +
Sbjct: 642 LKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLRMAAERGAF 701
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR+R AA+ I+FT++ LK+
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 KVTDDDDA---KMAQMVCSLTNREECMACGS 808
KV+ +++ A M+CSL NR+EC+ CGS
Sbjct: 762 KVSKEEEEKERNTAAMMCSLENRDECLMCGS 792
>gi|452985233|gb|EME84990.1| hypothetical protein MYCFIDRAFT_214917 [Pseudocercospora fijiensis
CIRAD86]
Length = 914
Score = 1117 bits (2890), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/777 (66%), Positives = 629/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG++E V FDKITAR+ +L YGL EH D ++ KV GVY+GVTT QLD+LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDSTAITMKVINGVYQGVTTIQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA LAARI VSNLHK TKK FS + D+Y++ N ++ AP+I+D
Sbjct: 61 AETAAYMTTTHPDYAILAARIAVSNLHKQTKKQFSAVVSDLYHYVNPKTRKAAPMISDYT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+++MK+A L+S I+YDRDF+Y YFGFKTLERSYLL++ GKV ERPQ M+MRVAVGIH
Sbjct: 121 YNVVMKHADELNSAIVYDRDFNYQYFGFKTLERSYLLRIDGKVAERPQQMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI++AI+TY+ MS ++FTHASPTLF+AGTP AQL+SCFLV MKDDSIEGIYDTLK CA+
Sbjct: 181 EDIEAAIETYNYMSNKYFTHASPTLFSAGTPNAQLASCFLVDMKDDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATGSYI GTNGTSNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKNAGGIGLNVHRIRATGSYIGGTNGTSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+ F+DLRKNHGKEE RARDLF+ALW+PDLFM+RV+ NG W+L CPNE PGLA
Sbjct: 301 LEPWHADVLAFMDLRKNHGKEEVRARDLFFALWIPDLFMKRVEENGEWTLMCPNECPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE+LY +YEKEG+ ++ V+AQ +W+ IL++Q ETG P++L+KD CN+KSNQ+NL
Sbjct: 361 DVYGEEFEKLYEQYEKEGRGRETVRAQKIWYAILEAQTETGGPFILYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+I+Y++P E AVCNLASIALP YV +N +
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASIALPTYV------------------DIENETY 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EV +VT NLNK I++N+YPV AR+SN RHRPIG+GVQGLAD F+ L MPFDS
Sbjct: 463 DFKKLHEVVQVVTRNLNKTIEINHYPVPEARKSNFRHRPIGLGVQGLADAFLALRMPFDS 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LN IFETIY+ AL S E+A + GPYETY GSPVSKG LQ DMWGV P+D WDW
Sbjct: 523 PEARRLNIQIFETIYHAALTASCELAEKLGPYETYEGSPVSKGELQYDMWGVTPTDLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+++GVRNSLLVAPMPTASTSQI+G NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 TALKAKIAEHGVRNSLLVAPMPTASTSQIMGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL + GLWS +KN+II D GS+Q+IP IP++LKA+YKTVWEI Q+T+V MA DRG +
Sbjct: 643 LKDLVDRGLWSENMKNRIIADGGSIQRIPNIPDDLKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
ID SQSLNIHM +P GK+TS+HF W GLKTGMYYLR+ AA+ I+FTVD +LK
Sbjct: 703 IDQSQSLNIHMKEPTMGKITSMHFTGWKLGLKTGMYYLRTMAASAPIQFTVDQEMLK 759
>gi|444731474|gb|ELW71827.1| Ribonucleoside-diphosphate reductase large subunit [Tupaia
chinensis]
Length = 792
Score = 1117 bits (2890), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 534/811 (65%), Positives = 651/811 (80%), Gaps = 22/811 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG+QE V FDKIT+R++KL YGL+++ DP ++ KV G+Y GVT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTMVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT HPDYA LAARI VSNLHK TKK FS+ ++D+YN+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKST 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI++ N RL+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRV+VGIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKISGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+AI+TY+++S++WFTHASPTLFNAGT R QLSSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV++N WSL CPNE PGL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE+LY KYEK+G+ +KVV+AQ LW+ I++SQ ETGTPYML+K +CN+ +NQQNL
Sbjct: 361 EVWGEEFEKLYEKYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKASCNRTNNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YTS E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLAEVT ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FIL+ PF+S
Sbjct: 462 DFKKLAEVTKVIVRNLNKIIDINYYPIPEAYLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S ++A GPYETY GSPVSKGILQ DMW V P+D WDW
Sbjct: 522 PEAQLLNKQIFETIYYGALEASCDLAKEYGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I+K GVRNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 KLLKDKIAKYGVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE GLW+ +KN+II +GS+Q IP+IP++LK +YKTVWEI QKT++ MA +RG +
Sbjct: 642 LKDLTERGLWNEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR+R AA+ I+FT++ LK+
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 KVTDDDDA---KMAQMVCSLTNREECMACGS 808
K + +++ A MVCSL NR+EC+ CGS
Sbjct: 762 KTSKEEEEKERNTAAMVCSLENRDECLMCGS 792
>gi|240280028|gb|EER43532.1| ribonucleoside-diphosphate reductase subunit large [Ajellomyces
capsulatus H143]
gi|325088748|gb|EGC42058.1| ribonucleoside-diphosphate reductase subunit large [Ajellomyces
capsulatus H88]
Length = 881
Score = 1117 bits (2890), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/790 (66%), Positives = 630/790 (79%), Gaps = 22/790 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG++E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA+LAARI VSNLHK TKK FS I D+Y+++N ++ AP+I+
Sbjct: 61 AETAAYMTVTHPDYATLAARIAVSNLHKQTKKQFSSVIDDLYHYHNPKNQRPAPMISQTT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+ +M++A +S I+YDRDF+Y YFGFKTLERSYLL++ GKV ERPQHM+MRVAVGIH
Sbjct: 121 YETVMRHADEFNSAIVYDRDFNYQYFGFKTLERSYLLRINGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD++ I+TY++MSQ++FTHASPTLFNAGTP+ Q++SCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 DDVERVIETYNLMSQKFFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+++H IR TGSYI GTNG+SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNIHRIRGTGSYIAGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIFEFLDLRKNHGKEE RARDLF ALW PDLFM+RV+ N W+LFCPNEAPGLA
Sbjct: 301 LEPWHTDIFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNSEWTLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LY KYEKEG+ KK V+AQ LW+ IL++Q ETG P+ML+KD+CN+KSNQ+NL
Sbjct: 361 DVYGDEFEALYEKYEKEGRGKKTVKAQKLWYAILEAQTETGNPFMLYKDSCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+I+Y SP E AVCNLASIALP +V + RG +
Sbjct: 421 GTIRSSNLCTEIIEYCSPDEVAVCNLASIALPTFVDPI--------------RGE----Y 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL EVT +V NLNKIID NYYPVE A+RSN RHRPI GVQGLAD F+ L +PFDS
Sbjct: 463 DFGKLHEVTQVVVRNLNKIIDRNYYPVEEAKRSNFRHRPIACGVQGLADAFLALRLPFDS 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+QLN IFETIY+ L S E+A +GPY TY GSPVS+GILQ DMW V P+D WDW
Sbjct: 523 PEAKQLNIQIFETIYHAGLTASCELAKIDGPYSTYEGSPVSQGILQYDMWNVTPTDLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+K+GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF +VN L
Sbjct: 583 DSLKQDIAKHGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQIVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL +MGLWS +KN+II + GS+Q IP IP+++KA+YKTVWEI Q+T+V MA DRG +
Sbjct: 643 LKDLVDMGLWSDNMKNRIIAEGGSIQNIPNIPQDIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +P GK+TS+HF W GLKTGMYYLR+ AA+ I+FTVD +E
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFTGWKLGLKTGMYYLRTMAASAPIQFTVD----QEQL 758
Query: 781 KVTDDDDAKM 790
KV D + A++
Sbjct: 759 KVADTNVARV 768
>gi|370988472|dbj|BAL43552.1| ribonucleotide reductase M1 [Xenopus laevis]
Length = 797
Score = 1117 bits (2889), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/816 (64%), Positives = 651/816 (79%), Gaps = 27/816 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG+QE V FDKIT+R++KL YGL++E DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNLEFVDPAQITMKVIQGLYSGVTTIELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT HPDYA LAAR+ VSNLHK TKK+FS+ ++D+YN+ N + +P+++ +
Sbjct: 61 AETAATLTTKHPDYAILAARVAVSNLHKETKKTFSDVMEDLYNYVNPLNSKHSPMVSKET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI++ N RL+S IIYDRDF Y++FGFKTLERSYLLK+ GKV ERPQHMLMRV+VGIHK
Sbjct: 121 LDIVLANKDRLNSSIIYDRDFSYNFFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DID+AI+TY+++S++WFTHASPTLFNAGT R QLSSCFL+CMKDDSIEGIYDTLK+CA+
Sbjct: 181 TDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLCMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH D+F+FLDL+KN GKEE RARDLFYA+W+PDLFM+RV++N WSL CP+E PGL
Sbjct: 301 LEPWHYDVFDFLDLKKNTGKEEQRARDLFYAMWIPDLFMKRVENNLDWSLMCPHECPGLE 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG +FE LY KYE+EG+ +KVV+AQ +W I++SQ ETGTPYML+KD CN+KSNQQNL
Sbjct: 361 EVWGDKFEELYEKYEREGRTRKVVKAQQVWHAIIESQTETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SN CTE+++YTS E AVCNLAS+AL YV + R F
Sbjct: 421 GTIKCSNQCTEIVEYTSDKEVAVCNLASLALNMYV-------------------TPERSF 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLA+VT ++ NLNKII++N+YPV A SN +HRPIGIGVQGLAD FIL+ PF+S
Sbjct: 462 DFKKLADVTKVIVRNLNKIIEINFYPVPEAEYSNKKHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
+AQ LNK IFETIYY AL +S E+A GPYETY G PVSKGILQ DMW V P+D WDW
Sbjct: 522 EKAQMLNKQIFETIYYAALESSCELAKELGPYETYEGCPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 TALKEKIAKYGIRNSLLLAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
+ DLTE GLW+ +KN+II ++GS+Q +P IP +LK +YKTVWEI QKT++ MA DRG +
Sbjct: 642 MKDLTEQGLWNEEMKNQIIANNGSIQNVPDIPADLKELYKTVWEISQKTVITMAADRGAF 701
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR+R AA+ I+FT++ LKE
Sbjct: 702 IDQSQSLNIHVAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKEKE 761
Query: 781 KVT--------DDDDAKMAQMVCSLTNREECMACGS 808
+T ++ + A MVCSL NR+EC+ CGS
Sbjct: 762 LITMETTEKDKEEKEKNKAAMVCSLENRDECLMCGS 797
>gi|410915400|ref|XP_003971175.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
isoform 2 [Takifugu rubripes]
Length = 795
Score = 1117 bits (2888), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 534/814 (65%), Positives = 649/814 (79%), Gaps = 25/814 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG+QEAV FDKIT R++KL YGL+ E DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQEAVSFDKITFRVQKLCYGLNSEFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT +PDYA LAARI VSNLHK TKK FS+ ++D+YN+ N + +P+I+ +
Sbjct: 61 AETAATLTTKYPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYVNPLNKQHSPMISKET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI+++N RL+S IIYDRDF Y++FGFKTLERSYLLK GKV ERPQHMLMRVAVGIH+
Sbjct: 121 LDIVLENKDRLNSAIIYDRDFSYNFFGFKTLERSYLLKTNGKVAERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI++AI+TY+++S++WFTHASPTLFNAGT + QLSSCFL+ M++DSIEGIYDTL +CA+
Sbjct: 181 ADIEAAIETYNLLSEKWFTHASPTLFNAGTRKPQLSSCFLLAMREDSIEGIYDTLTQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
+SKSAGGIG++V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFAVY
Sbjct: 241 VSKSAGGIGLAVSCIRATGSYIAGTNGRSNGLVPMLRVYNNTARYVDQGGNKRPGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+D+F FL+L+KN GKEE RARDLF+ALW+PDLFM+RV+SN WSL CP+E PGL
Sbjct: 301 LEPWHSDVFAFLELKKNTGKEEQRARDLFFALWIPDLFMKRVESNQDWSLMCPSECPGLI 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DCWG EFE LYT+YEKEG+AK+VV+AQ LW+ I++SQ ETGTPYML+KD CN+KSNQQNL
Sbjct: 361 DCWGEEFEELYTRYEKEGRAKRVVKAQQLWYAIIESQTETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+++YTS E AVCNLASIAL YV + R +
Sbjct: 421 GTIKSSNLCTEIVEYTSKDEVAVCNLASIALNMYV-------------------TPQRTY 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETA---RRSNLRHRPIGIGVQGLADTFILLGMP 537
DF KLA VT I+ NLNKIID+NYYPV RSN+RHRPIGIGVQGLAD FIL+ P
Sbjct: 462 DFNKLASVTKIIVRNLNKIIDINYYPVPEVCLLLRSNMRHRPIGIGVQGLADAFILMRHP 521
Query: 538 FDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDR 597
++S EAQ LN IFETIYY AL S E+AA GPYETY GSPVSKG+LQ DMWG P+D
Sbjct: 522 YESPEAQLLNIQIFETIYYAALEASCELAAEFGPYETYAGSPVSKGVLQYDMWGKTPTDL 581
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW L++ I+K+GVRNSLL+APMPTAST+QILGNNE E YTSNIY+RRVLSGEF +VN
Sbjct: 582 WDWNALKEKIAKHGVRNSLLLAPMPTASTAQILGNNESIEAYTSNIYTRRVLSGEFQIVN 641
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
HLL DLTE GLWS +KN++I +GS+Q I +IP++LK +YKTVWEI QKT++ MA DR
Sbjct: 642 PHLLKDLTERGLWSDAMKNQLIAHNGSIQDIQEIPDDLKQLYKTVWEISQKTVLKMAADR 701
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
G YID SQSLNIH+ +P +GKLTS+HF+ W GLKTGMYYLR++ AA+ I+FT++ LK
Sbjct: 702 GAYIDQSQSLNIHIAEPTYGKLTSMHFYGWKLGLKTGMYYLRTKPAANPIQFTLNREKLK 761
Query: 778 ENPKVTDDDDAK---MAQMVCSLTNREECMACGS 808
E ++AK MA MVCSL N++ECM GS
Sbjct: 762 EAQSAKSKEEAKERNMAAMVCSLANKDECMMYGS 795
>gi|432898484|ref|XP_004076524.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Oryzias latipes]
Length = 793
Score = 1117 bits (2888), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 532/812 (65%), Positives = 647/812 (79%), Gaps = 23/812 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG++EAV FDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRREAVSFDKITSRIQKLCYGLNSDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT HPDYA LAARI VSNLHK TKK FS+ ++D+YN+ N + +P+I+ +
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYVNPLNKRHSPMISKET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+I+++N RL+S IIYDRDF Y++FGFKTLERSYLLK+ GK ERPQHMLMRVAVGIHK
Sbjct: 121 LEIVLENKDRLNSAIIYDRDFSYNFFGFKTLERSYLLKINGKAAERPQHMLMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DID AI+TY+++S++WFTHASPTLFNAGT R QLSSCFL+ MKDDSI+GIYDTLK+CA+
Sbjct: 181 TDIDEAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLAMKDDSIDGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
+SKSAGGIG++V IRATGSYI GTNGTSNG+VPMLRV+N+TARYVDQGG KR GAFAVY
Sbjct: 241 VSKSAGGIGLAVSCIRATGSYIAGTNGTSNGLVPMLRVYNNTARYVDQGGNKRPGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+FEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV++N WSL CP+E PGL
Sbjct: 301 LEPWHADVFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVENNQDWSLMCPSECPGLE 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+CWG EFE+LY +YEKEG+AK+VV+AQ +W+ I++SQ ETGTPYML+KD CN KSNQQNL
Sbjct: 361 ECWGEEFEQLYIRYEKEGRAKRVVKAQQVWYAIIESQTETGTPYMLYKDACNGKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+++YTS E AVCNLASIAL YV + + F
Sbjct: 421 GTIKSSNLCTEIVEYTSKDEVAVCNLASIALNMYV-------------------TPEKTF 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLA VT ++ +NLNKIID+NYYPV A RSN RHRPIGIGVQGLAD FIL+ F+S
Sbjct: 462 DFKKLASVTKVIVKNLNKIIDINYYPVAEAERSNRRHRPIGIGVQGLADAFILMRYAFES 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LN IFETIYY AL S E+AA G YETY GSPVSKGILQ DMWG P+D WDW
Sbjct: 522 PEAQLLNIQIFETIYYAALEASCELAAHYGTYETYAGSPVSKGILQYDMWGKTPTDLWDW 581
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+ +GVRNSLL+APMPTAST+QILGNNE E YTSNIY+RRVLSGEF +VN HL
Sbjct: 582 EALKAKIALHGVRNSLLLAPMPTASTAQILGNNESIEAYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE GLW+ +KN++I +GS+Q+I IP +LK +YKTVWEI QKT++ MA DRG Y
Sbjct: 642 LKDLTERGLWNEDMKNQLIAQNGSIQEIEGIPADLKQLYKTVWEISQKTVLKMAADRGAY 701
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +PN+GKLTS+HF+ W GLKTGMYYLR++ AA+ I+FT++ LKE
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKLGLKTGMYYLRTKPAANPIQFTLNKEKLKEAQ 761
Query: 781 KVTDDDDA----KMAQMVCSLTNREECMACGS 808
++ A MVCSL N++EC+ CGS
Sbjct: 762 TTRSAEEELRELNNAAMVCSLANKDECLMCGS 793
>gi|302307390|ref|NP_984039.2| ADL057Wp [Ashbya gossypii ATCC 10895]
gi|299788978|gb|AAS51863.2| ADL057Wp [Ashbya gossypii ATCC 10895]
gi|374107252|gb|AEY96160.1| FADL057Wp [Ashbya gossypii FDAG1]
Length = 890
Score = 1117 bits (2888), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/778 (64%), Positives = 637/778 (81%), Gaps = 14/778 (1%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG++E V FDKITAR+ +L YGL +H D V ++Q++ +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEPVKFDKITARISRLCYGLDPKHVDAVKITQRIISGVYEGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AET A MTT HPDYA+LAARI +SNLHK T K FS+ + D+Y++ N ++GL +P+I+D+V
Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSQVVSDLYHYTNPKNGLHSPMISDEV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+I+M + L+S I+YDRDF Y+YFGFKTLERSYLL++ GKV ERPQHM+MRVAVGIH
Sbjct: 121 YEIVMAHKDELNSAIVYDRDFQYNYFGFKTLERSYLLRIDGKVAERPQHMVMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI AI+TY++MS R+FTHASPTLFNAGTP Q+SSCFLV MKDDSIEGIYDTLKECA+
Sbjct: 181 KDIKKAIETYNLMSMRYFTHASPTLFNAGTPHPQMSSCFLVAMKDDSIEGIYDTLKECAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIR+TGSYI GTNGTSNGI+PM+RV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGIIPMVRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+D+F+F+D+RKNHGKEE RARDLF ALWVPDLFM RVQ NG W+LF P+EAPGL+
Sbjct: 301 LEPWHSDVFDFIDIRKNHGKEEIRARDLFPALWVPDLFMRRVQENGDWTLFSPSEAPGLS 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG EFE LY +Y +EG+ +K ++AQ LW+ IL++Q ETGTP++L+KD CN+KSNQ+NL
Sbjct: 361 DVWGEEFEELYERYVREGRGRKTIKAQKLWYAILEAQTETGTPFILYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLC E+++Y+SP ETAVCNLASIALP ++ E + K +++
Sbjct: 421 GTIKSSNLCCEIVEYSSPEETAVCNLASIALPAFIAE--------------AADGKTQWY 466
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL E+ +VT NLN++ID NYYPVETA+RSN+RHRPI +GVQGLAD F++L +PFDS
Sbjct: 467 DFDKLHEIAKVVTRNLNRVIDRNYYPVETAKRSNMRHRPIALGVQGLADAFMILRIPFDS 526
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
+A++LN IFET+Y+ A S E+A EGPYE++ GSP S+GILQ DMW PS WDW
Sbjct: 527 PQAKELNSQIFETLYHAACEASMELAIEEGPYESFKGSPASQGILQFDMWNHKPSGMWDW 586
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I ++G+RNSLL+APMPTASTSQILG NECFEPYTSN+YSRRVLSGEF +VN +L
Sbjct: 587 DALKAKIIEHGMRNSLLLAPMPTASTSQILGYNECFEPYTSNMYSRRVLSGEFQIVNPYL 646
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W +K+ II D+GS+Q +P IP+ELK +YKTVWE+ QKT++DMA DRG +
Sbjct: 647 LRDLVDLGIWDDSMKSHIISDNGSIQGLPNIPQELKDLYKTVWELSQKTIIDMAADRGAF 706
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE 778
+D SQSLNIH+ P G+LTS+HF+ W +GLKTGMYYLR++AA+ AI+FTVD +V ++
Sbjct: 707 VDQSQSLNIHIRAPTMGRLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTVDKAVAEQ 764
>gi|452842681|gb|EME44617.1| hypothetical protein DOTSEDRAFT_152571 [Dothistroma septosporum
NZE10]
Length = 916
Score = 1117 bits (2888), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/777 (66%), Positives = 629/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG++E V FDKITAR+ +L YGL EH D ++ KV GVY GVTT QLD+LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITMKVIAGVYHGVTTIQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK FS ++D+Y + N ++G KAP+I+++
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSAVVQDLYAYINPKTGKKAPMISEET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y +MK++ L+S I+YDRDF+Y YFGFKTLERSYLL++ GKV ERPQ M+MRVAVGIH
Sbjct: 121 YATVMKHSDELNSAIVYDRDFNYQYFGFKTLERSYLLRIDGKVAERPQQMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI++AI+TY+ MS ++FTHASPTLF+AGTP+AQL+SCFLV MKDDSI+GIYDTLK CA+
Sbjct: 181 EDIEAAIETYNYMSLKYFTHASPTLFSAGTPQAQLASCFLVAMKDDSIDGIYDTLKICAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ VHNIRATGSYI GTNGTSNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKNAGGIGLHVHNIRATGSYIGGTNGTSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+ +F+DLRKNHGKEE RARDLFYALW+PDLFM+RV+ NG W+L CPNE PGL+
Sbjct: 301 LEPWHADVMQFMDLRKNHGKEEVRARDLFYALWIPDLFMQRVEQNGTWTLMCPNECPGLS 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EF+ LY +YE+EGK ++ V+AQ +W+ IL++Q ETGTP++L+KD N+KSNQ+NL
Sbjct: 361 DVYGDEFKELYERYEREGKGRETVRAQKIWYAILEAQTETGTPFILYKDAANRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+++Y++P E AVCNLAS+ALP YV +N F
Sbjct: 421 GTIKSSNLCTEIMEYSAPDEVAVCNLASLALPTYV------------------DIENEVF 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EVT +VT NLNK I++NYYPV AR+SN RHRPIG+GV GLAD F+ L MPFDS
Sbjct: 463 DFKKLHEVTKVVTRNLNKTIEINYYPVPEARKSNFRHRPIGLGVNGLADAFLALRMPFDS 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LN IFETIY+ AL S E+A + GPYETY GSPVS+G LQ DMWG P+D WDW
Sbjct: 523 PEAKELNIQIFETIYHAALEASCELAEKLGPYETYPGSPVSQGELQYDMWGKTPTDLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+++GVRNSLLVAPMPTASTSQI+G NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 AALKGKIAQHGVRNSLLVAPMPTASTSQIMGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL + GLWS +KN+II D+GS+Q+IP IP++LKA+YKTVWEI Q+ +V MA DRG +
Sbjct: 643 LKDLVDRGLWSENMKNRIIADNGSIQRIPNIPDDLKALYKTVWEISQRNIVQMAADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
ID SQSLNIHM +P GK+TS+HF W GLKTGMYYLR++AA+ I+FTVD +LK
Sbjct: 703 IDQSQSLNIHMKEPTMGKITSMHFAGWKLGLKTGMYYLRTQAASAPIQFTVDQEMLK 759
>gi|408394054|gb|EKJ73310.1| hypothetical protein FPSE_06575 [Fusarium pseudograminearum CS3096]
Length = 895
Score = 1117 bits (2888), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/790 (65%), Positives = 631/790 (79%), Gaps = 22/790 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG+QE V FDKITAR+ +L YGL + H DPV ++QKV +GVY GVTT QLD+LA
Sbjct: 1 MFVRKRDGRQERVQFDKITARVSRLCYGLDMNHVDPVAITQKVISGVYGGVTTIQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK +S + D+Y+ N ++ +P+I+ +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSAVVSDLYHWVNPKNDRASPMISKET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+ +M++ LDS I+YDRDF+Y+YFGF+TL RSYLL++ GK+ ERPQHM+MRVAVGI
Sbjct: 121 YECVMRHKEELDSAIVYDRDFNYNYFGFRTLSRSYLLQIDGKIAERPQHMIMRVAVGIWG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDI+ ++TY++MS ++FTHASPTLFNAGTP+ QLSSCFLV MK+DSI+GIYDTLK CA+
Sbjct: 181 DDIERVLETYNLMSSKFFTHASPTLFNAGTPQPQLSSCFLVDMKEDSIDGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG++ H IRATGSYI GTNGTSNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKMAGGIGLNAHRIRATGSYIAGTNGTSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+FEFLDLRKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+L CPNE PGLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVERNGEWTLMCPNECPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EFE LY KYE+EGK +K ++AQ LW+ IL++Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DCYGDEFEALYEKYEREGKGRKSIKAQKLWYAILEAQTETGNPFMLYKDHCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+I+Y +P E AVCNLAS++LP ++ ++ +
Sbjct: 421 GTIRSSNLCTEIIEYCAPDEVAVCNLASLSLPSFI------------------NYEDACY 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EVT +V NLNKIIDVN+YPV+ AR SN+RHRPIG+GVQGLAD F+ L MPF+S
Sbjct: 463 DFKKLHEVTQVVVRNLNKIIDVNHYPVQEARNSNMRHRPIGLGVQGLADAFLALRMPFES 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LNK IFETIY+ AL TS ++A EGPY T+ GSP S+GILQ DMW V PSD WDW
Sbjct: 523 PEARELNKQIFETIYHAALTTSVQLAKEEGPYSTFKGSPASEGILQFDMWNVKPSDLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+ + +G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 EPLREDVKTHGIRNSLLVAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL +MGLWS +KN+II D+GS+Q IP IP E+KA+YKTVWEI Q+ +V MA DRG +
Sbjct: 643 LKDLVDMGLWSDAMKNRIIADNGSIQNIPNIPAEIKALYKTVWEISQRQVVQMAADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIHM P GK+TS+HF W GLKTGMYYLR++AAA I+FTVD +EN
Sbjct: 703 IDQSQSLNIHMKDPTMGKITSMHFAGWKLGLKTGMYYLRTQAAAAPIQFTVD----QENL 758
Query: 781 KVTDDDDAKM 790
K+ D + A +
Sbjct: 759 KIADSNSASI 768
>gi|378729263|gb|EHY55722.1| ribonucleoside-diphosphate reductase large chain [Exophiala
dermatitidis NIH/UT8656]
Length = 918
Score = 1117 bits (2888), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/777 (66%), Positives = 629/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG++E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVFKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK FS I D+Y++ N ++G +P+I+ +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSSVISDLYHYVNPKNGKPSPMISTET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+ +M++ L+S I+YDRDF+Y YFGFKTLERSYLLK+ +V ERPQHMLMRVAVGIH
Sbjct: 121 YECVMRHQDELNSAIVYDRDFNYQYFGFKTLERSYLLKIGKQVAERPQHMLMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD++ AI+TY++MSQ+ FTHASPTLFNAGTP+ QLSSCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 DDVEKAIETYNLMSQKCFTHASPTLFNAGTPQPQLSSCFLIDMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATGSYI GTNGTSNG++PMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHCIRATGSYIAGTNGTSNGLIPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+FE+L+LRKNHGKEE RARDLFYALW PDLFM+RV+ N W+LFCP+EAPGLA
Sbjct: 301 LEPWHADVFEWLNLRKNHGKEEVRARDLFYALWTPDLFMKRVEKNQDWTLFCPHEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LY KYEKEG+ ++ ++AQ LW+ IL++Q ETG P+ML+KD CNKKSNQ+NL
Sbjct: 361 DVYGDEFEALYEKYEKEGRGRQTIKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++YT+P E AVCNLAS+ALP +V + +RG +
Sbjct: 421 GTIRSSNLCTEIVEYTAPDEVAVCNLASLALPTFVDQ--------------ARGE----Y 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF +L EV +VT NLNKIID+NYYPV A+ SN+RHRPIG+GVQGLAD F+ L +PFDS
Sbjct: 463 DFGRLHEVVQVVTRNLNKIIDINYYPVPEAKNSNMRHRPIGLGVQGLADAFLALRLPFDS 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+QLN IFETIY+ AL S E+A +GPY TY GSPVS+GILQ DMW V P+D WDW
Sbjct: 523 PEARQLNIQIFETIYHAALTASCELAKEQGPYSTYEGSPVSQGILQYDMWNVTPTDLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+K+GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 DALKAEIAKHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++GLWS +KN+II + GS+Q IP IP ++KA+YKTVWEI Q+T++ MA DRG +
Sbjct: 643 LKDLVDLGLWSDNMKNRIIAEGGSIQNIPNIPADIKALYKTVWEISQRTVLQMAADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
ID SQSLNIH+ +P GK+TS+HF W GLKTGMYYLR+ AA+ I+FTVD LK
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFAGWKMGLKTGMYYLRTMAASAPIQFTVDQEQLK 759
>gi|195578133|ref|XP_002078920.1| GD22272 [Drosophila simulans]
gi|194190929|gb|EDX04505.1| GD22272 [Drosophila simulans]
Length = 812
Score = 1117 bits (2888), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/820 (62%), Positives = 652/820 (79%), Gaps = 31/820 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
+YV+KRDG+QE VHFDKIT+R++KL Y L+++ DPV ++ +V G+Y GVTT +LD LA
Sbjct: 12 LYVIKRDGRQEEVHFDKITSRIQKLCYNLNMDFVDPVTITLQVINGLYCGVTTQELDNLA 71
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA +T NHPDYA LAARI VSNLHK TKK+FS+ +D+YNH N+ + K PL+++
Sbjct: 72 AEIAAGLTCNHPDYAILAARIAVSNLHKETKKAFSDVFEDLYNHVNKETNQKVPLVSEFH 131
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+++ KNA RL+S IIYDRDF Y+YFGFKTLERSYLLK GK+ ERPQHMLMRVA+GIH
Sbjct: 132 YNVVKKNATRLNSSIIYDRDFGYNYFGFKTLERSYLLKRNGKIAERPQHMLMRVAIGIHG 191
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+A++TY+++S+R+FTHASPTLF A T R QLSSCFL+ M DSIEGI+ ++++CA+
Sbjct: 192 EDIDAAVETYNLLSERYFTHASPTLFAAATNRPQLSSCFLLTMTADSIEGIFKSVEQCAM 251
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++VH IRA G+ I GTNGTSNG+VPMLRVFN+ ARYVDQGGGKR GAFA+Y
Sbjct: 252 ISKSAGGIGLNVHCIRAKGTSICGTNGTSNGLVPMLRVFNNVARYVDQGGGKRPGAFAIY 311
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+D+FEFL+L+KN GKEE+RARDLFYALW+PDLFM+RV++NG WSL CP++ PGL
Sbjct: 312 LEPWHSDVFEFLELKKNTGKEENRARDLFYALWIPDLFMKRVEANGDWSLMCPHKCPGLH 371
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE+LY KYE+EG+A + V+AQ+LWF I+++Q+ETG PYMLFKD CN+KSNQQN+
Sbjct: 372 EVWGDEFEKLYEKYEQEGRANRTVKAQSLWFAIIEAQVETGNPYMLFKDACNRKSNQQNV 431
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++Y+SP E AVCNLASIAL +V + + +
Sbjct: 432 GTIKCSNLCTEIVEYSSPDEIAVCNLASIALNMFV-------------------TPEKTY 472
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EVT IVT+NLNKIID+NYYP+ AR+SNLRHRP+GIG+QG AD IL+ P++S
Sbjct: 473 DFKKLKEVTKIVTKNLNKIIDINYYPLPEARKSNLRHRPVGIGIQGFADALILMRFPYES 532
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA LN+ IFETIYY AL S E+A EGPYETY GSPVSKGILQ DMW P++ WDW
Sbjct: 533 EEAGLLNQQIFETIYYGALEASCELAQTEGPYETYEGSPVSKGILQYDMWDKVPTNLWDW 592
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I K+GVRNSLLVAPMPTAST+QI+GNNE FEPYT+NIY+RRVLSGEF VVN HL
Sbjct: 593 QKLKESIKKHGVRNSLLVAPMPTASTAQIMGNNESFEPYTTNIYTRRVLSGEFQVVNHHL 652
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE+ LW +KN+II GS+Q I IP++++ +YKTVWEI K+ + MA DRG +
Sbjct: 653 LRDLTELDLWDDDMKNQIISSRGSIQNIETIPQKVRDLYKTVWEISVKSTIKMAADRGAF 712
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD-----TSV 775
ID SQS NIH+ +PN+GKLTS+HF++W GLKTGMYYLR++ AA+AI+FTV+ S+
Sbjct: 713 IDQSQSFNIHVAEPNYGKLTSIHFYSWKAGLKTGMYYLRTKPAANAIQFTVNKKQGAVSM 772
Query: 776 LKEN-------PKVTDDDDAKMAQMVCSLTNREECMACGS 808
+N K +D + KMA MVCSL N++ CM+CGS
Sbjct: 773 NGQNGTAEGSPQKYEEDRERKMADMVCSLENKDACMSCGS 812
>gi|336468943|gb|EGO57106.1| ribonucleotide reductase large subunit [Neurospora tetrasperma FGSC
2508]
gi|350288752|gb|EGZ69977.1| ribonucleotide reductase large subunit [Neurospora tetrasperma FGSC
2509]
Length = 920
Score = 1117 bits (2888), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/785 (66%), Positives = 624/785 (79%), Gaps = 22/785 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG+QE V FDKITAR+ +L YGL + H DPV ++QKV +GVY GVTT+QLD+LA
Sbjct: 1 MYVKKRDGRQERVQFDKITARVSRLCYGLDMNHVDPVAITQKVISGVYGGVTTAQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK +S I ++YN+ N R+G +P+IA DV
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSFVISELYNYVNPRTGKHSPMIAKDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+ +M++ DS I+YDRDF+Y YFGFKTLERSYLLK+ G++ ERPQHM+MRVAVGI
Sbjct: 121 YECVMRHKDEFDSAIVYDRDFNYQYFGFKTLERSYLLKLDGQIAERPQHMIMRVAVGIWG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD++ I+TY++MS + FTHASPTLFNAGTP+ QLSSCFLV MK+DSIEGIYDTLK CA+
Sbjct: 181 DDVERVIETYNLMSLKTFTHASPTLFNAGTPQPQLSSCFLVDMKEDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+++H IRATGSYI GTNGTSNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKMAGGIGLNIHRIRATGSYIAGTNGTSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+FEFLDLRKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+L CP+E PGLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEQNGQWTLMCPHECPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LY KYEKEGK +K V+AQ LW+ IL++Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DVYGDEFEALYEKYEKEGKGRKTVKAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+I+Y++P E AVCNLAS+AL ++ +N +
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASLALSAFI------------------DYENASY 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EVT +V NLNKIID+N+YPV+ A SN+RHRPIG+GVQGLAD F+ L MPFDS
Sbjct: 463 DFKKLHEVTQVVVRNLNKIIDINHYPVKEAHNSNMRHRPIGVGVQGLADAFLALRMPFDS 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
A +LN IFETIY+ AL S ++A +GPY TY GSPVS+GILQ DMW V P++ WDW
Sbjct: 523 DAASKLNIQIFETIYHAALTASCQLAKEQGPYATYEGSPVSQGILQYDMWNVTPTNLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I K GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 TALKADIKKYGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL EMGLWS +KN+II + GS+Q I IP ++KA+YKTVWEI Q+T+V MA DRG +
Sbjct: 643 LRDLVEMGLWSDAMKNRIIAEGGSIQNIQSIPNDIKALYKTVWEISQRTIVKMAADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIHM +P GK+TS+HF W GLKTGMYYLR++AAA I+FTVD L
Sbjct: 703 IDQSQSLNIHMREPTMGKITSMHFAGWKMGLKTGMYYLRTQAAAQPIQFTVDQEAL---- 758
Query: 781 KVTDD 785
+ TDD
Sbjct: 759 RATDD 763
>gi|149719333|ref|XP_001499936.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
[Equus caballus]
Length = 792
Score = 1116 bits (2886), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 533/811 (65%), Positives = 652/811 (80%), Gaps = 22/811 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG+QE V FDKIT+R++KL YGL+++ DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT HPDYA LAARI VSNLHK TKK FS+ ++D+YN+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKPT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI++ N RL+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRV+VGIH
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHS 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+AI+TY+++S++WFTHASPTLFNAGT R QLSSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV+SN WSL CPNE PGL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVESNQDWSLMCPNECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE+LY YEK+G+ +KVV+AQ LW+ I++SQ ETGTPYML+KD+CN+KSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YTS E AVCNLAS+AL +V + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMFV-------------------TSEHTY 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLAEVT ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FIL+ PF+S
Sbjct: 462 DFQKLAEVTKVIVRNLNKIIDINYYPIPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S +++ +GPYETY GSPVSKGILQ DMW V P+D WDW
Sbjct: 522 PEAQLLNKQIFETIYYGALEASCDLSREDGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K GVRNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 KLLKEKIAKYGVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE GLW+ +KN+II +GS+Q I +IP++LK +YKTVWEI QKT++ MA +RG +
Sbjct: 642 LKDLTERGLWNEEMKNQIIACNGSIQSIQEIPDDLKQLYKTVWEISQKTILKMAAERGAF 701
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR+R AA+ I+FT++ LK+
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 761
Query: 781 KVTDDDDA---KMAQMVCSLTNREECMACGS 808
K + +++ A MVCSL NR+EC+ CGS
Sbjct: 762 KASKEEEEKERNTAAMVCSLENRDECLMCGS 792
>gi|158299261|ref|XP_554103.3| AGAP010198-PA [Anopheles gambiae str. PEST]
gi|157014280|gb|EAL39294.3| AGAP010198-PA [Anopheles gambiae str. PEST]
Length = 809
Score = 1116 bits (2886), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/819 (63%), Positives = 659/819 (80%), Gaps = 30/819 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG++E VH DKIT+R++KL YGL+++ DPV ++ +V G+Y GVTT +LD LA
Sbjct: 10 MYVFKRDGRKEEVHLDKITSRIQKLCYGLNMDFVDPVAITLRVINGLYSGVTTQELDNLA 69
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT+H DYA LAAR+ VSNLHK TKK FSE + D+Y NE K+P+I+D
Sbjct: 70 AETAATLTTDHADYAILAARLAVSNLHKETKKQFSEVMHDLYMMENEFLKTKSPMISDFH 129
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y +IM NA RL+S IIYDRDF Y+YFGFKTLERSYLLK++GK+VERPQHMLMRVA+GIH
Sbjct: 130 YKVIMDNADRLNSAIIYDRDFGYNYFGFKTLERSYLLKIKGKIVERPQHMLMRVAIGIHG 189
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+AI+TY+++S+R+FTHASPT+F A T R QLSSCFL+ M +DSIEGIYDTLK+CA+
Sbjct: 190 EDIDAAIETYNLLSERYFTHASPTMFAAATQRPQLSSCFLLTMSEDSIEGIYDTLKQCAL 249
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++VH IRA G+YI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 250 ISKSAGGIGLNVHCIRAKGTYISGTNGISNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 309
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIFEFLDL+KN GKEE RARD+FYALW+PDLFM+RV++N +WSL CP++ PGL+
Sbjct: 310 LEPWHGDIFEFLDLKKNTGKEEVRARDMFYALWIPDLFMQRVEANEMWSLMCPHDCPGLS 369
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG EFE+LYT YEKEG+ + V+AQ+LWF I++SQ+ETG PYML+KD CN+KSNQQN+
Sbjct: 370 DTWGEEFEKLYTGYEKEGRFIRQVKAQDLWFAIIESQVETGVPYMLYKDACNRKSNQQNI 429
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++Y+S E AVCNLASIAL +V++ ++ +
Sbjct: 430 GTIKCSNLCTEIVEYSSKDEVAVCNLASIALNMFVKQ-------------------DKTY 470
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL EV VT NLNKIIDVNYYPV A+RSN+RHRPIGIGVQG+AD FIL+ P++S
Sbjct: 471 DFAKLKEVAKTVTRNLNKIIDVNYYPVPEAKRSNMRHRPIGIGVQGMADAFILMRYPYES 530
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ+LN+ IFETIYY AL S E+AAR+GPYETY GSPVSKGILQ +MW P+D W+W
Sbjct: 531 EEAQKLNQQIFETIYYGALEASCELAARDGPYETYEGSPVSKGILQYEMWNKEPTDLWNW 590
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K+G+RNSLL+APMPTAST+QILGNNE FEPYTSN+Y+RRVLSGEF VVN HL
Sbjct: 591 AELKEKIAKHGIRNSLLLAPMPTASTAQILGNNESFEPYTSNVYNRRVLSGEFQVVNHHL 650
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLT MGLW +KN+I+ ++GS+QKI IP+E++ +YKTVWEI KT + MA DRG +
Sbjct: 651 LQDLTNMGLWDLDMKNEILSNNGSIQKIAAIPQEIRDLYKTVWEISVKTCIKMAADRGAF 710
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN- 779
ID SQS NIH+ +PN+GKLTS+HF+ W GLKTGMYYLR++ A +AI+FTVD + L+
Sbjct: 711 IDQSQSFNIHVAEPNYGKLTSIHFYGWKMGLKTGMYYLRTKPAVNAIQFTVDKTKLQNGN 770
Query: 780 ----PKVTDDD------DAKMAQMVCSLTNREECMACGS 808
++++++ + +MA+MVCSL N++ECM CGS
Sbjct: 771 ESNVSRMSNENGSFAERNRRMAEMVCSLENKDECMMCGS 809
>gi|148224574|ref|NP_001084312.1| ribonucleotide reductase M1 [Xenopus laevis]
gi|49256098|gb|AAH74185.1| RRM1 protein [Xenopus laevis]
Length = 797
Score = 1116 bits (2886), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 526/816 (64%), Positives = 650/816 (79%), Gaps = 27/816 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG+QE V FDKIT+R++KL YGL++E DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNLEFVDPAQITMKVIQGLYSGVTTIELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT HPDYA LAAR+ VSNLHK TKK FS+ ++D+YN+ N + +P+++ +
Sbjct: 61 AETAATLTTKHPDYAILAARVAVSNLHKETKKIFSDVMEDLYNYVNPLNSKHSPMVSRET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI++ N RL+S IIYDRDF Y++FGFKTLERSYLLK+ GKV ERPQHMLMRV+VGIHK
Sbjct: 121 LDIVLANKDRLNSSIIYDRDFSYNFFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DID+AI+TY+++S++WFTHASPTLFNAGT R QLSSCFL+CMKDDSIEGIYDTLK+CA+
Sbjct: 181 TDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLCMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH D+F+FLDL+KN GKEE RARDLFYA+W+PDLFM+R ++N WSL CP+E PGL
Sbjct: 301 LEPWHYDVFDFLDLKKNTGKEEQRARDLFYAMWIPDLFMKRAENNLDWSLMCPHECPGLE 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG +FE LY KYE+EG+ +KVV+AQ +W I++SQ ETGTPYML+KD CN+KSNQQNL
Sbjct: 361 EVWGDKFEELYEKYEREGRTRKVVKAQQVWHAIIESQTETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YTS E AVCNLAS+AL YV + R F
Sbjct: 421 GTIKCSNLCTEIVEYTSDKEVAVCNLASLALNMYV-------------------TPERSF 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLA+VT ++ NLNKII++N+YPV A SN +HRPIGIGVQGLAD FIL+ PF+S
Sbjct: 462 DFKKLADVTKVIVRNLNKIIEINFYPVPEAEYSNKKHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
+AQ LNK IFETIYY AL +S E+A GPYETY G PVSKGILQ DMW V P+D WDW
Sbjct: 522 EKAQMLNKQIFETIYYAALESSCELAKELGPYETYEGCPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 TALKEKIAKYGIRNSLLLAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
+ DLTE GLW+ +KN+II ++GS+Q +P IP +LK +YKTVWEI QKT++ MA DRG +
Sbjct: 642 MKDLTEQGLWNEEMKNQIIANNGSIQNVPDIPADLKELYKTVWEISQKTVITMAADRGAF 701
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR+R AA+ I+FT++ LKE
Sbjct: 702 IDQSQSLNIHVAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKEKE 761
Query: 781 KVT--------DDDDAKMAQMVCSLTNREECMACGS 808
+T ++ + A MVCSL NR+EC+ CGS
Sbjct: 762 LITMETTEKDKEEKEKNKAAMVCSLENRDECLMCGS 797
>gi|345563310|gb|EGX46313.1| hypothetical protein AOL_s00110g137 [Arthrobotrys oligospora ATCC
24927]
Length = 917
Score = 1116 bits (2886), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/778 (67%), Positives = 632/778 (81%), Gaps = 19/778 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG++E V FDKITAR+ +L YGL EH D ++QKV GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKERVQFDKITARVSRLCYGLDAEHVDAATITQKVIAGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK FS+ + D+Y++ N R+ +P+I+
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSQVVSDLYHYVNPRNKRPSPMISKST 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+ +M++A L+S I+YD+DF+Y+YFGFKTLERSYLL++ GKV ERPQHM+MRV+VGIH
Sbjct: 121 YETVMRHADELNSAIVYDKDFNYNYFGFKTLERSYLLRLDGKVAERPQHMIMRVSVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
++I+ AI+TY++MS ++FTHASPTLFNAGTP+AQLSSCFLV MKDDSIEGIYDTLK CA+
Sbjct: 181 ENIEKAIETYNLMSSKYFTHASPTLFNAGTPQAQLSSCFLVAMKDDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ VHNIRATGSYI GTNGTSNG++PMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHVHNIRATGSYIAGTNGTSNGLIPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+F+FLDLRKNHGKEE RARDLFYALW+PDLFM+RV++N WSLFCPNEA GLA
Sbjct: 301 LEPWHADVFDFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVEANLDWSLFCPNEATGLA 360
Query: 361 DCWGTEFERLYTKYEK-EGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQN 419
DC+G EFE LY KYEK E A+K ++AQ LW+ IL++Q ETG P+ML+KD CNKKSNQ+N
Sbjct: 361 DCYGEEFEALYEKYEKTENLARKTIKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKN 420
Query: 420 LGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRY 479
LG IKSSNLCTE+++Y+SP E AVCNLASIALP +V + +N Y
Sbjct: 421 LGIIKSSNLCTEIVEYSSPDEVAVCNLASIALPTFVDVV-----------------RNEY 463
Query: 480 FDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFD 539
DF+KL EVT ++T NLNKIIDVNYYPVE A+RSN RHRPI +GVQGLAD F+ L MPF+
Sbjct: 464 -DFQKLHEVTKVITRNLNKIIDVNYYPVEEAKRSNFRHRPIAVGVQGLADAFLALRMPFE 522
Query: 540 STEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWD 599
S EA+ LNK IFETIY+ A S+E+AA +GPYE+Y GSP S+G LQ DMW V P+D WD
Sbjct: 523 SPEARHLNKQIFETIYHGAAEASAELAAEQGPYESYEGSPASQGQLQYDMWNVTPTDLWD 582
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L+ I+K+G+RNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN
Sbjct: 583 WDELKAKIAKHGMRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPW 642
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL DL +MGLWS +KN+II D GS+Q +P IP ++K++YKTVWEI QK ++D+A DR
Sbjct: 643 LLRDLVDMGLWSDNMKNRIIADGGSIQNVPNIPADIKSLYKTVWEISQKVVIDLAADRSA 702
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
+ID SQSLNIH+ P GKLTS+HF+ W +GLKTGMYYLR+ AA+ AI+FTVD LK
Sbjct: 703 FIDQSQSLNIHIKDPTMGKLTSMHFYGWKKGLKTGMYYLRTMAASAAIQFTVDQEALK 760
>gi|85081938|ref|XP_956818.1| ribonucleoside-diphosphate reductase large chain [Neurospora crassa
OR74A]
gi|30316299|sp|Q9UW15.2|RIR1_NEUCR RecName: Full=Ribonucleoside-diphosphate reductase large chain;
AltName: Full=Ribonucleotide reductase large subunit
gi|11256439|pir||T51069 ribonucleoside-diphosphate reductase large chain (un-24gene)
[imported] - Neurospora crassa
gi|9368573|emb|CAB98233.1| ribonucleoside-diphosphate reductase large chain (un-24)
[Neurospora crassa]
gi|28917896|gb|EAA27582.1| ribonucleoside-diphosphate reductase large chain [Neurospora crassa
OR74A]
Length = 929
Score = 1116 bits (2886), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/785 (66%), Positives = 624/785 (79%), Gaps = 22/785 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG+QE V FDKITAR+ +L YGL + H DPV ++QKV +GVY GVTT+QLD+LA
Sbjct: 1 MYVKKRDGRQERVQFDKITARVSRLCYGLDMNHVDPVAITQKVISGVYGGVTTAQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK +S I ++YN+ N R+G +P+IA DV
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSLVISELYNYVNPRTGKHSPMIAKDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+ +M++ DS I+YDRDF+Y YFGFKTLERSYLLK+ G++ ERPQHM+MRVAVGI
Sbjct: 121 YECVMRHKDEFDSAIVYDRDFNYQYFGFKTLERSYLLKLDGQIAERPQHMIMRVAVGIWG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD++ I+TY++MS + FTHASPTLFNAGTP+ QLSSCFLV MK+DSIEGIYDTLK CA+
Sbjct: 181 DDVERVIETYNLMSLKTFTHASPTLFNAGTPQPQLSSCFLVDMKEDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+++H IRATGSYI GTNGTSNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKMAGGIGLNIHRIRATGSYIAGTNGTSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+FEFLDLRKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+L CP+E PGLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEQNGQWTLMCPHECPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LY KYEKEGK +K V+AQ LW+ IL++Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DVYGDEFEALYEKYEKEGKGRKTVKAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+I+Y++P E AVCNLAS+AL ++ +N +
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASLALSAFI------------------DYENASY 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EVT +V NLNKIID+N+YPV+ A SN+RHRPIG+GVQGLAD F+ L MPFDS
Sbjct: 463 DFKKLHEVTQVVVRNLNKIIDINHYPVKEAHNSNMRHRPIGVGVQGLADAFLALRMPFDS 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
A +LN IFETIY+ AL S ++A +GPY TY GSPVS+GILQ DMW V P++ WDW
Sbjct: 523 DAASKLNIQIFETIYHAALTASCQLAKEQGPYATYEGSPVSQGILQYDMWNVTPTNLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I K GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 TALKADIKKYGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL EMGLWS +KN+II + GS+Q I IP ++KA+YKTVWEI Q+T+V MA DRG +
Sbjct: 643 LRDLVEMGLWSDAMKNRIIAEGGSIQNIQSIPNDIKALYKTVWEISQRTIVKMAADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIHM +P GK+TS+HF W GLKTGMYYLR++AAA I+FTVD L
Sbjct: 703 IDQSQSLNIHMREPTMGKITSMHFAGWKMGLKTGMYYLRTQAAAQPIQFTVDQEAL---- 758
Query: 781 KVTDD 785
+ TDD
Sbjct: 759 RATDD 763
>gi|5733808|gb|AAD49743.1| ribonucleotide reductase large subunit [Neurospora crassa]
Length = 929
Score = 1116 bits (2886), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/785 (66%), Positives = 624/785 (79%), Gaps = 22/785 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG+QE V FDKITAR+ +L YGL + H DPV ++QKV +GVY GVTT+QLD+LA
Sbjct: 1 MYVKKRDGRQERVQFDKITARVSRLCYGLDMNHVDPVAITQKVISGVYGGVTTAQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK +S I ++YN+ N R+G +P+IA DV
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSLVISELYNYVNPRTGKHSPMIAKDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+ +M++ DS I+YDRDF+Y YFGFKTLERSYLLK+ G++ ERPQHM+MRVAVGI
Sbjct: 121 YECVMRHKDEFDSAIVYDRDFNYQYFGFKTLERSYLLKLDGQIAERPQHMIMRVAVGIWG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD++ I+TY++MS + FTHASPTLFNAGTP+ QLSSCFLV MK+DSIEGIYDTLK CA+
Sbjct: 181 DDVERVIETYNLMSLKTFTHASPTLFNAGTPQPQLSSCFLVDMKEDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+++H IRATGSYI GTNGTSNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKMAGGIGLNIHRIRATGSYIAGTNGTSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+FEFLDLRKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+L CP+E PGLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEQNGQWTLMCPHECPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LY KYEKEGK +K V+AQ LW+ IL++Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DVYGDEFEALYEKYEKEGKGRKTVKAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+I+Y++P E AVCNLAS+AL ++ +N +
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASLALSAFI------------------DYENASY 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EVT +V NLNKIID+N+YPV+ A SN+RHRPIG+GVQGLAD F+ L MPFDS
Sbjct: 463 DFKKLHEVTQVVVRNLNKIIDINHYPVKEAHNSNMRHRPIGVGVQGLADAFLALRMPFDS 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
A +LN IFETIY+ AL S ++A +GPY TY GSPVS+GILQ DMW V P++ WDW
Sbjct: 523 DAASKLNIQIFETIYHAALTASCQLAKEQGPYATYEGSPVSQGILQYDMWNVTPTNLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I K GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 TALKADIKKYGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL EMGLWS +KN+II + GS+Q I IP ++KA+YKTVWEI Q+T+V MA DRG +
Sbjct: 643 LRDLVEMGLWSDAMKNRIIAEGGSIQNIQSIPNDIKALYKTVWEISQRTIVKMAADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIHM +P GK+TS+HF W GLKTGMYYLR++AAA I+FTVD L
Sbjct: 703 IDQSQSLNIHMREPTMGKITSMHFAGWKMGLKTGMYYLRTQAAAQPIQFTVDQEAL---- 758
Query: 781 KVTDD 785
+ TDD
Sbjct: 759 RATDD 763
>gi|195403619|ref|XP_002060363.1| GJ14594 [Drosophila virilis]
gi|194140867|gb|EDW57333.1| GJ14594 [Drosophila virilis]
Length = 818
Score = 1116 bits (2886), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/826 (62%), Positives = 653/826 (79%), Gaps = 37/826 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
+YV+KRDG++E +HFDKIT+R++KL Y L+++ DPV ++ KV G+Y GVTT +LD LA
Sbjct: 12 LYVIKRDGRKEEIHFDKITSRVQKLCYNLNMDFVDPVSITLKVINGLYCGVTTQELDNLA 71
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA++TT+H DYA LAARI VSNLHK T+K FS+ +D+Y H N + +P++++
Sbjct: 72 AEIAASLTTHHADYALLAARIAVSNLHKETRKVFSDVFEDLYKHVNRETNETSPMVSEYH 131
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+I+ N+ RL+S IIYDRDF Y+YFGFKTLERSYLLK+ GK+ ERPQHMLMRVA+GIH
Sbjct: 132 YNIVANNSDRLNSAIIYDRDFGYNYFGFKTLERSYLLKINGKIAERPQHMLMRVAIGIHG 191
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDIDSAI+TY+++S+R+FTHASPTLF A T R QLSSCFL+ M DSIEGI+ T+++CA+
Sbjct: 192 DDIDSAIETYNLLSERYFTHASPTLFAAATNRPQLSSCFLLTMASDSIEGIFKTVEQCAM 251
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++VH IRA G+ I GTNGTSNG+VPMLRVFN+ ARYVDQGGGKR GAFA+Y
Sbjct: 252 ISKSAGGIGLNVHCIRAKGTSISGTNGTSNGLVPMLRVFNNVARYVDQGGGKRPGAFAIY 311
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+D+FEFLDL+KN GKEEHRARDLFYALW+PDLFM+RV++N WSL CP++ PGL
Sbjct: 312 LEPWHSDVFEFLDLKKNTGKEEHRARDLFYALWIPDLFMKRVEANEDWSLMCPHKCPGLQ 371
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG EFE+LY KYEKEG+ ++V+AQ+LWF I++SQ+ETGTPYMLFKD+CN+KSNQQN+
Sbjct: 372 DVWGEEFEKLYVKYEKEGRQNRIVKAQSLWFAIIESQVETGTPYMLFKDSCNRKSNQQNV 431
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++Y++P E AVCNLASIAL +V + + +
Sbjct: 432 GTIKCSNLCTEIVEYSAPDEIAVCNLASIALNMFV-------------------TAEKSY 472
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL +VT IVT+NLNKIID+NYYP+ A++SNLRHRPIGIGVQG AD IL+ P++S
Sbjct: 473 DFKKLKDVTKIVTKNLNKIIDINYYPLPEAKKSNLRHRPIGIGVQGFADALILMRFPYES 532
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA LN+ IFETIYY AL S E++ ++GPYETY GSPVSKG+LQ DMW +P+D WDW
Sbjct: 533 EEASLLNQQIFETIYYGALEASCELSKKDGPYETYIGSPVSKGVLQYDMWNRSPTDLWDW 592
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I ++GVRNSLL+APMPTAST+QI+GNNE FEPYTSNIY+RRVLSGEF VVN HL
Sbjct: 593 DHLKRSIKQHGVRNSLLIAPMPTASTAQIMGNNESFEPYTSNIYTRRVLSGEFQVVNPHL 652
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE+ LW +KN+II GS+Q I IPEE++ +YKTVWEI K+ + MA DRG +
Sbjct: 653 LRDLTELDLWDDEMKNQIIASRGSIQNIESIPEEIRDLYKTVWEISVKSTIKMAADRGAF 712
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD--TSVLKE 778
ID SQS NIH+ +PN+GKLTS+HF++W GLKTGMYYLR++ AA+AI+FTVD SV++
Sbjct: 713 IDQSQSFNIHVAEPNYGKLTSIHFYSWKAGLKTGMYYLRTKPAANAIQFTVDKNVSVVEI 772
Query: 779 NPKVTDDDDA----------------KMAQMVCSLTNREECMACGS 808
N + D A +MAQM+CSL N++ C++CGS
Sbjct: 773 NAQNFVDQHASMEMGDTNESDIERERRMAQMICSLENKDACLSCGS 818
>gi|449301212|gb|EMC97223.1| hypothetical protein BAUCODRAFT_138578 [Baudoinia compniacensis
UAMH 10762]
Length = 920
Score = 1116 bits (2886), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/777 (66%), Positives = 627/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG++E V FDKITAR+ +L YGL EH DP ++ KV +GVY+GVTT QLD+LA
Sbjct: 2 MYVFKRDGRKERVQFDKITARVSRLCYGLDPEHVDPAAITMKVISGVYQGVTTVQLDDLA 61
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA LAARI VSNLHK TKK +S I D+Y++ N +S AP+I+++
Sbjct: 62 AETAAYMTTTHPDYAILAARIAVSNLHKQTKKLWSSVISDLYHYVNPKSKKPAPMISEET 121
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+ +MK+A L+S I+YDRDF+Y YFGFKTLERSYLL++ GKV ERPQHM+MRVAVGIH
Sbjct: 122 YNTVMKHADELNSAIVYDRDFNYQYFGFKTLERSYLLRIDGKVAERPQHMIMRVAVGIHG 181
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI++AI+TY++MS ++FTHASPTLF AGTP+AQL+SCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 182 EDIEAAIETYNLMSNKYFTHASPTLFMAGTPQAQLASCFLIDMKEDSIEGIYDTLKTCAM 241
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++VH IRATGSYI GTNGTSNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 242 ISKSAGGIGLNVHRIRATGSYIGGTNGTSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 301
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+F FLDLRKNHGKEE RARDLFYALW+PDLFM+RV+SNG W+L CPNE PGLA
Sbjct: 302 LEPWHADVFSFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVESNGNWTLMCPNECPGLA 361
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LY +YE+EG+ ++ ++AQ LW+ IL++Q ETG P+M +KD N+KSNQ+NL
Sbjct: 362 DVYGDEFEALYEQYEREGRGRETIRAQKLWYAILEAQTETGNPFMCYKDAANRKSNQKNL 421
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++Y +P E AVCNLAS+ALP YV +N +
Sbjct: 422 GTIRSSNLCTEIMEYCAPDEVAVCNLASLALPTYV------------------DIQNEVY 463
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EV +VT+NLNKII++NYYPV AR+SN RHRPIG+GV GLAD F+ L MPFDS
Sbjct: 464 DFQKLHEVVKVVTKNLNKIINLNYYPVPEARKSNFRHRPIGLGVSGLADAFLALRMPFDS 523
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+ LN IFETIY+ AL +S EIAA GPYETY GSPVSKG LQ DMW P+D WDW
Sbjct: 524 DEAKLLNIQIFETIYHAALESSCEIAAELGPYETYEGSPVSKGELQYDMWNKEPTDLWDW 583
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+++GVRNSLLVAPMPTASTSQI+G NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 584 TSLKAKIAQHGVRNSLLVAPMPTASTSQIMGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 643
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL + GLWS +KN+II D GS+Q IP IP+ELKA+YKTVWEI Q+ +V MA DRG +
Sbjct: 644 LKDLVDRGLWSDNMKNRIIADGGSIQNIPNIPDELKALYKTVWEISQRHIVQMAADRGAF 703
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
ID SQSLNIHM +P GK+TS+HF W GLKTGMYYLR+ AA+ I+FTVD LK
Sbjct: 704 IDQSQSLNIHMKEPTMGKITSMHFTGWKLGLKTGMYYLRTMAASAPIQFTVDQEKLK 760
>gi|353029222|gb|ABF71875.2| ribonucleotide reductase large subunit [Neurospora crassa]
Length = 923
Score = 1115 bits (2885), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/785 (66%), Positives = 624/785 (79%), Gaps = 22/785 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG+QE V FDKITAR+ +L YGL + H DPV ++QKV +GVY GVTT+QLD+LA
Sbjct: 1 MYVKKRDGRQERVQFDKITARVSRLCYGLDMNHVDPVAITQKVISGVYGGVTTAQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK +S I ++YN+ N R+G +P+IA DV
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSLVISELYNYVNPRTGKHSPMIAKDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+ +M++ DS I+YDRDF+Y YFGFKTLERSYLLK+ G++ ERPQHM+MRVAVGI
Sbjct: 121 YECVMRHKDEFDSAIVYDRDFNYQYFGFKTLERSYLLKLDGQIAERPQHMIMRVAVGIWG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD++ I+TY++MS + FTHASPTLFNAGTP+ QLSSCFLV MK+DSIEGIYDTLK CA+
Sbjct: 181 DDVERVIETYNLMSLKTFTHASPTLFNAGTPQPQLSSCFLVDMKEDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+++H IRATGSYI GTNGTSNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKMAGGIGLNIHRIRATGSYIAGTNGTSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+FEFLDLRKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+L CP+E PGLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEQNGQWTLMCPHECPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LY KYEKEGK +K V+AQ LW+ IL++Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DVYGDEFEALYEKYEKEGKGRKTVKAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+I+Y++P E AVCNLAS+AL ++ +N +
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASLALSAFI------------------DYENASY 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EVT +V NLNKIID+N+YPV+ A SN+RHRPIG+GVQGLAD F+ L MPFDS
Sbjct: 463 DFKKLHEVTQVVVRNLNKIIDINHYPVKEAHNSNMRHRPIGVGVQGLADAFLALRMPFDS 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
A +LN IFETIY+ AL S ++A +GPY TY GSPVS+GILQ DMW V P++ WDW
Sbjct: 523 DAASKLNIQIFETIYHAALTASCQLAKEQGPYATYEGSPVSQGILQYDMWNVTPTNLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I K GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN L
Sbjct: 583 TALKADIKKYGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL EMGLWS +KN+II + GS+Q I IP ++KA+YKTVWEI Q+T+V MA DRG +
Sbjct: 643 LRDLVEMGLWSDAMKNRIIAEGGSIQNIQSIPNDIKALYKTVWEISQRTIVKMAADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIHM +P GK+TS+HF W GLKTGMYYLR++AAA I+FTVD L
Sbjct: 703 IDQSQSLNIHMREPTMGKITSMHFAGWKMGLKTGMYYLRTQAAAQPIQFTVDQEAL---- 758
Query: 781 KVTDD 785
+ TDD
Sbjct: 759 RATDD 763
>gi|119188101|ref|XP_001244657.1| hypothetical protein CIMG_04098 [Coccidioides immitis RS]
Length = 893
Score = 1115 bits (2885), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/771 (67%), Positives = 624/771 (80%), Gaps = 18/771 (2%)
Query: 7 DGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAA 66
DG++E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LAAETAA
Sbjct: 23 DGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTIELDNLAAETAAY 82
Query: 67 MTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMK 126
MT HPDYA LAARI VSNLHK TKK FS I D+Y++ N ++ AP+I+ Y+I+MK
Sbjct: 83 MTVTHPDYAILAARIAVSNLHKQTKKQFSSVIDDLYHYINPKNNRPAPMISQKTYEIVMK 142
Query: 127 NAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSA 186
++A L+S I+YDRDF+Y YFGFKTLERSYLL++ GKV ERPQHM+MRVAVGIH +DI+ A
Sbjct: 143 HSAELNSAIVYDRDFNYQYFGFKTLERSYLLRINGKVAERPQHMIMRVAVGIHGEDIEKA 202
Query: 187 IKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAG 246
I+TY++MSQ++FTHASPTLFNAGTP+ Q++SCFL+ MK+DSIEGIYDTLK CA+ISK+AG
Sbjct: 203 IETYNLMSQKFFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCALISKTAG 262
Query: 247 GIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHA 306
GIG++VH IRATGSYI GTNG+SNGI+PMLRVFN+TARYVDQGG KR GAFA+YLEPWH+
Sbjct: 263 GIGLNVHRIRATGSYIAGTNGSSNGIIPMLRVFNNTARYVDQGGNKRPGAFAIYLEPWHS 322
Query: 307 DIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTE 366
DIFEFLDLRKNHGKEE RARDLF ALW PDLFM+RV+ NG W+LFCPNEAPGLAD +G E
Sbjct: 323 DIFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNGDWTLFCPNEAPGLADVYGDE 382
Query: 367 FERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSS 426
FE LY +YEKEG+ +K ++AQ LW+ IL++Q ETG P+ML+KD CN+KSNQ+NLGTI+SS
Sbjct: 383 FEALYEQYEKEGRGRKTIKAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNLGTIRSS 442
Query: 427 NLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLA 486
NLCTE+I+YTSP E AVCNLAS+ALP YV + RG +DF KL
Sbjct: 443 NLCTEIIEYTSPDEVAVCNLASLALPTYVDPV--------------RGE----YDFGKLH 484
Query: 487 EVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQL 546
EVT ++ NLNKIID N+YPV AR+SN RHRPI +GVQGLAD F+ L +PFDS EA+QL
Sbjct: 485 EVTQVLVRNLNKIIDGNHYPVPEARKSNFRHRPIAVGVQGLADAFLALRLPFDSPEARQL 544
Query: 547 NKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDM 606
N IFETIY+ AL S +IA +GPYETY GSPVS+GILQ DMW V P+D WDW L+
Sbjct: 545 NIQIFETIYHAALTASCDIAKVDGPYETYEGSPVSQGILQYDMWNVTPTDLWDWDSLKRD 604
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
I+K+GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN LL DL +
Sbjct: 605 IAKHGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWLLKDLVD 664
Query: 667 MGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQS 726
+GLWS +KN+II + GS+Q IP IP ++KA+YKTVWEI Q+T+V MA DRG YID SQS
Sbjct: 665 LGLWSDNMKNRIIAEGGSIQNIPNIPADIKALYKTVWEISQRTIVQMAADRGAYIDQSQS 724
Query: 727 LNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
LNIH+ +P GK+TS+HF W GLKTGMYYLR+ AA+ I+FTVD LK
Sbjct: 725 LNIHLKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEQLK 775
>gi|406672896|ref|ZP_11080121.1| ribonucleoside-diphosphate reductase, alpha subunit [Bergeyella
zoohelcum CCUG 30536]
gi|405587440|gb|EKB61168.1| ribonucleoside-diphosphate reductase, alpha subunit [Bergeyella
zoohelcum CCUG 30536]
Length = 777
Score = 1115 bits (2885), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 525/808 (64%), Positives = 650/808 (80%), Gaps = 31/808 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+GK+EAVHFDKITAR+ KL YGLSI D + +++KV G+Y VTT++LD LA
Sbjct: 1 MFVIKRNGKKEAVHFDKITARIHKLIYGLSISEKDVIEIAKKVIQGIYDNVTTTELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAAA TT HPD++ LAARI VSNLHKNT KSFS+T + +Y + + + APLI++++
Sbjct: 61 AETAAAQTTIHPDFSVLAARIAVSNLHKNTLKSFSKTAQLLYEYTDPITQTHAPLISEEI 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y II KNA LDS +IYDRD+++DYFGFKTLERSYL++ GKV ERPQH+ MRVA+GIHK
Sbjct: 121 YKIIRKNADELDSSLIYDRDYNFDYFGFKTLERSYLIRTNGKVTERPQHLFMRVALGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI +AI+TY++MS++WF HA+PTLFNAGTP+ Q+SSCFL+ M +DSI GI+DTLK CA+
Sbjct: 181 EDIQAAIETYNLMSEKWFIHATPTLFNAGTPKPQMSSCFLLSMTEDSIAGIFDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIGVS+HNIR+TGSYI+GT G SNGI+PMLRVFNDTARYVDQGGGKRKGA AVY
Sbjct: 241 ISQSAGGIGVSIHNIRSTGSYIKGTGGISNGIIPMLRVFNDTARYVDQGGGKRKGAIAVY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWH+DIFEFLD+RKNHGKEE RARDLF ALW+PDLFM+RV+++ +WSLF PNEA GL
Sbjct: 301 IEPWHSDIFEFLDIRKNHGKEEMRARDLFPALWIPDLFMQRVETDQMWSLFDPNEAQGLY 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G +F LYT YE EGK +K ++A+ LW IL++QIETGTPYM +KD N+KSNQ+N+
Sbjct: 361 DVYGEKFNELYTTYENEGKFRKQIKARELWTAILEAQIETGTPYMCYKDAVNEKSNQKNI 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++YT+ E AVCNLAS+ALPRYV + G F
Sbjct: 421 GTIRSSNLCTEIMEYTNADEVAVCNLASLALPRYVSDKG--------------------F 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EVT IVT NLNKIID NYYP+ + SN RHRPIG+GVQGLAD F+LL +PF+S
Sbjct: 461 DFQKLYEVTKIVTRNLNKIIDGNYYPIPQTKTSNDRHRPIGLGVQGLADVFLLLRLPFES 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
A++LNKDIFETIY+ ++ S E+A +G Y ++ GSP+S+G Q D+W + PSDRWDW
Sbjct: 521 EAARKLNKDIFETIYFASMEASMELAKEQGAYSSFAGSPLSEGKFQFDLWQIAPSDRWDW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+ + +GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY+RRVLSGEFVVVNK L
Sbjct: 581 EKLRNEVMTHGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYNRRVLSGEFVVVNKFL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL E+GLW+P +KNK+I ++GSVQ IP+IP ELK +YKTVWEIKQKT++DMA +RG +
Sbjct: 641 LKDLIELGLWNPTMKNKLIAENGSVQNIPEIPTELKELYKTVWEIKQKTIIDMAAERGAF 700
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
I SQSLN+ M +PNF KLTS+HFHAW GLKTGMYYLR++AA DAIKFTVDT +L
Sbjct: 701 ICQSQSLNLFMAEPNFAKLTSMHFHAWKSGLKTGMYYLRTKAAVDAIKFTVDTQIL---- 756
Query: 781 KVTDDDDAKMAQMVCSLTNREECMACGS 808
+ +Q CSL N EEC+ACGS
Sbjct: 757 -------SGQSQAACSLDNPEECLACGS 777
>gi|156408425|ref|XP_001641857.1| predicted protein [Nematostella vectensis]
gi|156228997|gb|EDO49794.1| predicted protein [Nematostella vectensis]
Length = 810
Score = 1115 bits (2884), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/819 (63%), Positives = 644/819 (78%), Gaps = 34/819 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
+YV+KR+G E V+ DKIT+R+ KL YGL E P+ ++ KV +G+Y+GV T++LD LA
Sbjct: 11 LYVLKRNGDSERVYLDKITSRISKLCYGLKNEFVKPINITMKVISGIYQGVKTTELDTLA 70
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA+MTT HPDYA LAARI VSNLHK TKK FSE ++++YN+ N ++ +PLI+ +
Sbjct: 71 AETAASMTTKHPDYAILAARIEVSNLHKETKKVFSEVMEELYNYVNPKNNKHSPLISKET 130
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DII K+A RL+S IIYDRD+ Y+YFGFKTL RSYLLK+ GKV ERPQHMLMRV+VGIH
Sbjct: 131 LDIIQKHADRLNSAIIYDRDYQYNYFGFKTLMRSYLLKINGKVAERPQHMLMRVSVGIHG 190
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+AI+TY++MS++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIY TL+ CA+
Sbjct: 191 EDIDAAIETYNLMSEKWFTHASPTLFNAGTNRPQMSSCFLLTMSDDSIEGIYGTLRTCAL 250
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIGV+VH IRA GSYI GTNG SNG+VPMLRV++ TARYVDQGG KR GAFA+Y
Sbjct: 251 ISKNAGGIGVNVHCIRAAGSYIAGTNGHSNGLVPMLRVYDSTARYVDQGGNKRPGAFAIY 310
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADI EFLDL+KN GKEE RARDLFYALW+PDLFM+RV+++G+WSL CPN+ PGL
Sbjct: 311 LEPWHADILEFLDLKKNTGKEEQRARDLFYALWIPDLFMKRVEADGMWSLMCPNQCPGLQ 370
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G +FE+LY KYE +GK + ++AQ LWF IL+SQ ETGTPYML+KD CN KSNQ+NL
Sbjct: 371 DCYGEKFEKLYEKYESQGKYMRQIKAQKLWFAILESQTETGTPYMLYKDACNSKSNQKNL 430
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++Y++P E AVCNLASIAL R+V P E F
Sbjct: 431 GTIKCSNLCTEIVEYSAPDEVAVCNLASIALNRFVNVDKSPPE----------------F 474
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+F+KL EVT +VT+NLNKIIDVNYYPV AR+SN RHRPIGIGVQGLAD FIL+ PF+S
Sbjct: 475 NFQKLFEVTQVVTKNLNKIIDVNYYPVPEARKSNFRHRPIGIGVQGLADAFILMRYPFES 534
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
+AQ+LNK IFETIYY A+ S ++AA GPYETY GSP S+G+LQ D+W V PS+ WDW
Sbjct: 535 QKAQELNKLIFETIYYGAVTASCDLAATNGPYETYEGSPASQGLLQYDLWNVTPSNLWDW 594
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ + ++G+RNSLL+APMPTAST+QILGNNE EPYTSNIYSRRVLSGEF +VN HL
Sbjct: 595 EALKKKVKEHGLRNSLLIAPMPTASTAQILGNNESIEPYTSNIYSRRVLSGEFQIVNHHL 654
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTEMGLW+ +KN++I ++GS+Q I +IP +LKA+YKTVWEIKQ+ L+DMA DRG +
Sbjct: 655 LKDLTEMGLWNDGMKNQLIANNGSIQDIKEIPADLKALYKTVWEIKQRVLIDMAADRGAF 714
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL---- 776
ID SQS N+ + QP F KLTS+HF+ W +GLKTGMYYLRSR A +AI+FTVD + L
Sbjct: 715 IDQSQSFNVFIAQPTFSKLTSMHFYGWKKGLKTGMYYLRSRPAVNAIQFTVDQTALAKKK 774
Query: 777 ---------KENPKVTDDDDAKMAQMVCSLTNREECMAC 806
+E PK D+DA A C N + C+ C
Sbjct: 775 ASDSSPTSNEEKPK--KDEDAAAA---CRRDNPDGCLMC 808
>gi|448118019|ref|XP_004203399.1| Piso0_001007 [Millerozyma farinosa CBS 7064]
gi|448120456|ref|XP_004203982.1| Piso0_001007 [Millerozyma farinosa CBS 7064]
gi|359384267|emb|CCE78971.1| Piso0_001007 [Millerozyma farinosa CBS 7064]
gi|359384850|emb|CCE78385.1| Piso0_001007 [Millerozyma farinosa CBS 7064]
Length = 860
Score = 1115 bits (2883), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/774 (65%), Positives = 633/774 (81%), Gaps = 16/774 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG++E V FDKITAR+++L YGL EH D V ++Q+V +GVY+GV T +LD LA
Sbjct: 1 MYVYKRDGRKEPVRFDKITARIQRLCYGLDTEHVDAVAITQRVISGVYQGVNTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA LAARI VSNLHK T K FS+ K +Y + N ++GL +P+I+D+
Sbjct: 61 AETAAYMTTIHPDYAILAARIAVSNLHKQTTKQFSQVCKQLYEYVNPKTGLHSPMISDET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y++I +NA L+S I+YDRDF+Y+YFGFKTLERSYLL++ GKV ERPQH++MRVAVGIH
Sbjct: 121 YEVIQRNADELNSAIVYDRDFNYNYFGFKTLERSYLLRIDGKVAERPQHLIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI I++Y++MSQR+FTH SPTLFNAGTP Q+SSCFLV MK+DSI+GIYDTLK CA+
Sbjct: 181 EDIPRVIESYNLMSQRFFTHGSPTLFNAGTPLPQMSSCFLVAMKEDSIDGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+ +HNIRATG+YI GTNGTSNGI+PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLHIHNIRATGAYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+F+D+RKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF PNEA GL+
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNGDWTLFSPNEATGLS 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LYTKYEKEG+ + V+AQ LW+ IL++Q ETGTP+ML+KD CNKK+NQ+NL
Sbjct: 361 DVYGDEFEELYTKYEKEGRGRSTVKAQKLWYSILEAQTETGTPFMLYKDACNKKTNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G IKSSNLC E+++Y+SP E AVCNLASIALP +V + + + ++
Sbjct: 421 GIIKSSNLCCEIVEYSSPDEVAVCNLASIALPSFVE----------------KDATSCWY 464
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+FEKL EVT +VT NLN+IID NYYPVE ARRSN+++RPI +GVQGLAD F+ L +PFDS
Sbjct: 465 NFEKLHEVTKVVTRNLNRIIDRNYYPVEQARRSNMKNRPIALGVQGLADAFMELRLPFDS 524
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LN IFETIY+ A+ +S E+A EGPYETY GSP SKG+L D+W P++ WDW
Sbjct: 525 QEAKELNIQIFETIYHAAVESSVELAEIEGPYETYEGSPASKGLLSFDLWDRKPTELWDW 584
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ ++K+G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL+GEF +VN ++
Sbjct: 585 DTLKQKMAKHGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQIVNPYM 644
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++GLW+ +KN II ++GS+Q +P IP+E+K++YKTVWEI QK ++DMA DR Y
Sbjct: 645 LRDLVDLGLWNDAMKNNIIANNGSIQGLPNIPDEIKSLYKTVWEISQKHIIDMAADRAAY 704
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTS 774
ID SQSLNIH+ P GKLTS+HF+ W RGLKTGMYYLR++AAA AI+FTVD +
Sbjct: 705 IDQSQSLNIHIRNPTMGKLTSMHFYGWKRGLKTGMYYLRTQAAAAAIQFTVDQA 758
>gi|320582719|gb|EFW96936.1| Ribonucleoside-diphosphate reductase large chain 1 [Ogataea
parapolymorpha DL-1]
Length = 862
Score = 1114 bits (2882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/772 (65%), Positives = 631/772 (81%), Gaps = 16/772 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG++E V FDKITAR+ +L YGL EH +PV ++Q+V +GVY GVTT +LD LA
Sbjct: 1 MYVLKRDGRKEPVRFDKITARVSRLCYGLDPEHVEPVAITQRVISGVYHGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA+LAARI +SNLHK T K FS+ + +Y++ N ++G +P+I+D+
Sbjct: 61 AETAAYMTTIHPDYATLAARIAISNLHKQTTKQFSQVVDQLYHYINPKNGKPSPMISDET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y I+ ++A L+S I+YDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHM+MRVA+GIH
Sbjct: 121 YRIVQEHADELNSAIVYDRDFSYNYFGFKTLERSYLLKIDGKVAERPQHMVMRVAIGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDI S I+TY++MSQ++FTHASPTLFNAGTP Q+SSCFLV MKDDSI+GIYDTLK CA+
Sbjct: 181 DDIPSVIETYNLMSQKFFTHASPTLFNAGTPHPQMSSCFLVAMKDDSIDGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIR+TGSYI GTNGTSNGI+PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKAAGGIGLHIHNIRSTGSYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWH+DIF+F+D+RKNHGKEE RARDLF ALW+PDLFMERV+ N W+LF P+EAPGLA
Sbjct: 301 VEPWHSDIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMERVEQNAEWTLFSPSEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EF+ LYT+YEKEG+ ++ V+AQ LW+ IL++Q ETGTP+ML+KD CN K+NQ+NL
Sbjct: 361 DVYGDEFKELYTRYEKEGRGRQTVKAQKLWYAILEAQTETGTPFMLYKDACNSKTNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G IKSSNLC E+++Y+SP E AVCNLASIALP +V ++
Sbjct: 421 GIIKSSNLCCEIVEYSSPEEVAVCNLASIALPAFVES----------------DDNTSWY 464
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+FEKL ++T +VT+NLNKIID NYYPV ARRSN+R+RPI +GVQGLAD F+ L +PFDS
Sbjct: 465 NFEKLHQITKVVTKNLNKIIDRNYYPVPEARRSNMRNRPIAVGVQGLADVFMQLRLPFDS 524
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LN IFETIY+ AL S+E+A R+G YET+ GSP S+GILQ D+WG P+D WDW
Sbjct: 525 PEARELNIQIFETIYHGALEASAELAVRDGKYETFEGSPASQGILQFDLWGKKPTDLWDW 584
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I K+G+RNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF +VN +L
Sbjct: 585 DSLKARIQKDGLRNSLLVAPMPTASTSQILGYNECFEPYTSNIYSRRVLAGEFQIVNPYL 644
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL +GLW+ +KN II D+GSVQ +P +P+ELK +Y+TVWEI QK+++DMA DRG Y
Sbjct: 645 LRDLVNLGLWNDSMKNFIIKDNGSVQNLPNVPQELKDLYRTVWEIPQKSIIDMAADRGAY 704
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
ID SQS+NIH+ P GKLTS+HF+ W +GLKTGMYYLR++AAA AI+FTVD
Sbjct: 705 IDQSQSMNIHLKNPTMGKLTSMHFYGWKKGLKTGMYYLRTQAAAAAIQFTVD 756
>gi|407917669|gb|EKG10973.1| Ribonucleotide reductase large subunit [Macrophomina phaseolina
MS6]
Length = 908
Score = 1114 bits (2882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/778 (65%), Positives = 628/778 (80%), Gaps = 20/778 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG++E V FDKITAR+ +L YGL EH DP ++QKV +GVY+GV+T +LD LA
Sbjct: 1 MFVFKRDGRKERVQFDKITARVSRLCYGLDPEHVDPATITQKVISGVYQGVSTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK FS I D+YN+ N ++ +P+I+ +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSAVIADLYNYVNPKNRKHSPMISKET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
++I+ K+A L+S I+YDRDF Y YFGFKTLERSYLL++ GKV ERPQ M+MRVAVGIH
Sbjct: 121 FEIVNKHAEELNSAIVYDRDFQYQYFGFKTLERSYLLRIDGKVAERPQQMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDI+ AI+TY++MS ++FTHASPTLFNAGTP+ QL+SCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 DDIEKAIETYNLMSLKYFTHASPTLFNAGTPKPQLASCFLIDMKEDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATGSYI GTNGTSNG++PMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIAGTNGTSNGLIPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+F FLDLRKNHGKEE RARDLFYALW+PDLFM+RV+ NG W+L CPNE PGLA
Sbjct: 301 LEPWHADVFSFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVEQNGTWTLMCPNECPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LY +YEKEG+ ++ V+AQ LW+ IL++Q+ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DVYGEEFEALYEQYEKEGRGRETVRAQKLWYAILEAQVETGNPFMLYKDHCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVR-EMGVPMESHPSKLVGSRGSKNRY 479
GTI+SSNLC E+++YT+P E AVCNLAS+ALP +V E GV
Sbjct: 421 GTIRSSNLCCEIVEYTAPDEVAVCNLASLALPTFVDVEEGV------------------- 461
Query: 480 FDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFD 539
+DF+KL EVT ++ +NLNKIID+N+YPV AR+SN+RHRPI +GV GLAD F+ L MPFD
Sbjct: 462 YDFKKLHEVTQVLVKNLNKIIDINHYPVPEARKSNMRHRPIAVGVNGLADAFLALRMPFD 521
Query: 540 STEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWD 599
S EA+QLN IFETIY+ AL S E+A R+GPYET+ GSP S+GILQ DMW P+D WD
Sbjct: 522 SPEAKQLNIQIFETIYHAALTASVELAKRDGPYETFQGSPASQGILQYDMWNKTPTDLWD 581
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L+ I+++G RNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN
Sbjct: 582 WDSLKAEIAQHGTRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPW 641
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL DL ++GLWS +KN+II +GS+Q+IP IP+++KA+YKTVWE+ Q+T+V MA DRG
Sbjct: 642 LLKDLVDLGLWSDQMKNRIIASNGSIQQIPNIPDDIKALYKTVWELSQRTIVQMAADRGA 701
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
+ID SQSLNIHM P GK+TS+HF W GLKTGMYYLR++AAA I+FTVD LK
Sbjct: 702 FIDQSQSLNIHMKDPTMGKITSMHFAGWKLGLKTGMYYLRTQAAAAPIQFTVDQEALK 759
>gi|302657477|ref|XP_003020459.1| hypothetical protein TRV_05425 [Trichophyton verrucosum HKI 0517]
gi|291184296|gb|EFE39841.1| hypothetical protein TRV_05425 [Trichophyton verrucosum HKI 0517]
Length = 872
Score = 1114 bits (2882), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/771 (66%), Positives = 623/771 (80%), Gaps = 18/771 (2%)
Query: 7 DGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAA 66
DG++E V FDKITAR+ +L YGL EH D ++Q+V +GVY+GVTT +LD LAAETAA
Sbjct: 4 DGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQRVISGVYQGVTTVELDNLAAETAAY 63
Query: 67 MTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMK 126
MT HPDYA LAARI VSNLHK TKK FS I+D+Y++ N ++G AP+I++ +I+MK
Sbjct: 64 MTVTHPDYAILAARIAVSNLHKQTKKQFSSVIEDLYHYVNPKNGRPAPMISEKTREIVMK 123
Query: 127 NAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSA 186
+A L+S I+YDRDF+Y YFGFKTLERSYLL+ GKV ERPQHM+MRVAVGIH +D++
Sbjct: 124 HAEELNSAIVYDRDFNYQYFGFKTLERSYLLRTNGKVAERPQHMIMRVAVGIHGEDVEKV 183
Query: 187 IKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAG 246
I+TY++MSQ++FTHASPTLFNAGTP+ Q++SCFL+ MK+DSIEGIYDTLK CA+ISK+AG
Sbjct: 184 IETYNLMSQKYFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCALISKTAG 243
Query: 247 GIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHA 306
GIG++VH IRATGSYI GTNG+SNGIVPMLRVFN+TARYVDQGG KR GAFA+YLEPWHA
Sbjct: 244 GIGLNVHRIRATGSYIAGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIYLEPWHA 303
Query: 307 DIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTE 366
DIFEFLDLRKNHGKEE RARDLF ALW PDLFM+RV+ NG W+LFCPNEAPGLAD +G E
Sbjct: 304 DIFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNGDWTLFCPNEAPGLADVYGEE 363
Query: 367 FERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSS 426
FE LY KYEKEG+ + ++AQ LW+ IL++Q ETG P+ML+KD+CN+KSNQ+NLGTI+SS
Sbjct: 364 FEALYEKYEKEGRGRTTIKAQKLWYAILEAQTETGNPFMLYKDSCNRKSNQKNLGTIRSS 423
Query: 427 NLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLA 486
NLCTE+++YT+P E AVCNLASIALP +V + RG +DF KL
Sbjct: 424 NLCTEIVEYTAPDEVAVCNLASIALPTFVDAV--------------RGE----YDFGKLH 465
Query: 487 EVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQL 546
EVT +V NLN+IID N+YPVE ARRSN RHRPI +GVQGLAD F+ L +PFDS EA+ L
Sbjct: 466 EVTQVVVRNLNRIIDGNHYPVEEARRSNFRHRPIAVGVQGLADAFLALRLPFDSPEAKLL 525
Query: 547 NKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDM 606
N IFET+Y+ AL S E+A +GPY +Y GSPVS+GILQ DMW V P+D WDW GL+
Sbjct: 526 NTQIFETLYHAALTASCELAKVDGPYSSYEGSPVSQGILQYDMWNVTPTDLWDWDGLKAE 585
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
ISK+GVRNSLL+APMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN LL DL +
Sbjct: 586 ISKHGVRNSLLLAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWLLKDLVD 645
Query: 667 MGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQS 726
+GLWS +KN+II D GS+Q IP IP ++KA+YKTVWEI Q+T+V MA DRG +ID SQS
Sbjct: 646 LGLWSDNMKNRIIADGGSIQNIPNIPADIKALYKTVWEISQRTIVQMAADRGAFIDQSQS 705
Query: 727 LNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
LNIH+ +P GK+TS+HF W GLKTGMYYLR+ AA+ I+FTVD LK
Sbjct: 706 LNIHLKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEQLK 756
>gi|212528622|ref|XP_002144468.1| ribonucleotide reductase large subunit Rnr1, putative [Talaromyces
marneffei ATCC 18224]
gi|210073866|gb|EEA27953.1| ribonucleotide reductase large subunit Rnr1, putative [Talaromyces
marneffei ATCC 18224]
Length = 872
Score = 1114 bits (2881), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/777 (66%), Positives = 625/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG++E V FDKITAR+ +L YGL +H D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MYVFKRDGRKERVQFDKITARVSRLCYGLDPDHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK FS I+D+Y++ N ++ AP+I+ ++
Sbjct: 61 AETAAYMTVTHPDYAVLAARIAVSNLHKQTKKQFSAVIEDLYHYVNPKNNKAAPMISGEM 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+ +MK+A L+S I+YDRDF+Y YFGFKTLERSYLL++ GKV ERPQHM+MRVAVGIH
Sbjct: 121 YETVMKHAEELNSAIVYDRDFNYQYFGFKTLERSYLLRINGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
++I+ AI+TY++MSQ++FTHASPTLFNAGTPR QL+SCFLV MK+DSIEGIYDTLK CA+
Sbjct: 181 ENIEKAIETYNLMSQKYFTHASPTLFNAGTPRPQLASCFLVDMKEDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++VH IRATGSYI GTNGTSNG+VPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLNVHRIRATGSYIGGTNGTSNGLVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+D+FEFLDLRKNHGKEE RARDLFYALW PDLFM RV++N W+LFCPNEA GLA
Sbjct: 301 LEPWHSDVFEFLDLRKNHGKEEVRARDLFYALWTPDLFMRRVEANQDWTLFCPNEASGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EF+ LY KYE+EG+ ++ V+AQ LW+ IL++Q ETG P+ML+KD CNKKSNQ+NL
Sbjct: 361 DVYGEEFDALYEKYEREGRGRRTVKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+I+Y +P E AVCNLAS+ALP +V +RG +
Sbjct: 421 GTIRSSNLCTEIIEYCAPDEVAVCNLASLALPTFVDT--------------ARGE----Y 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL EVT ++ NLNKIID+NYYPV A++SN RHRPI +GV GLAD F+ L +PFDS
Sbjct: 463 DFGKLHEVTQVLVRNLNKIIDINYYPVPEAKKSNFRHRPIAVGVNGLADAFLALRLPFDS 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+QLN IFETIY+ AL S E+A G YETY GSPVS+GILQ DMW P+D WDW
Sbjct: 523 PEAKQLNIQIFETIYHGALTASIELAKEHGTYETYEGSPVSQGILQYDMWERTPTDLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ IS++GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 DSLKAQISQHGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++GLWS +KN+II D GSVQ IP IP ++KA+YKTVWEI Q++++ MA DRG Y
Sbjct: 643 LKDLVDLGLWSDNMKNRIIADGGSVQNIPNIPADIKALYKTVWEISQRSILQMAADRGAY 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
ID SQSLNIHM +P GK+TS+HF W GLKTGMYYLR+ AA+ I+FTVD LK
Sbjct: 703 IDQSQSLNIHMKEPTMGKITSMHFAGWKMGLKTGMYYLRTMAASAPIQFTVDQEQLK 759
>gi|302498356|ref|XP_003011176.1| hypothetical protein ARB_02698 [Arthroderma benhamiae CBS 112371]
gi|291174724|gb|EFE30536.1| hypothetical protein ARB_02698 [Arthroderma benhamiae CBS 112371]
Length = 870
Score = 1114 bits (2881), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/771 (66%), Positives = 623/771 (80%), Gaps = 18/771 (2%)
Query: 7 DGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAA 66
DG++E V FDKITAR+ +L YGL EH D ++Q+V +GVY+GVTT +LD LAAETAA
Sbjct: 4 DGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQRVISGVYQGVTTVELDNLAAETAAY 63
Query: 67 MTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMK 126
MT HPDYA LAARI VSNLHK TKK FS I+D+Y++ N ++G AP+I++ +I+MK
Sbjct: 64 MTVTHPDYAILAARIAVSNLHKQTKKQFSSVIEDLYHYVNPKNGRPAPMISEKTREIVMK 123
Query: 127 NAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSA 186
+A L+S I+YDRDF+Y YFGFKTLERSYLL+ GKV ERPQHM+MRVAVGIH +D++
Sbjct: 124 HAEELNSAIVYDRDFNYQYFGFKTLERSYLLRTNGKVAERPQHMIMRVAVGIHGEDVEKV 183
Query: 187 IKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAG 246
I+TY++MSQ++FTHASPTLFNAGTP+ Q++SCFL+ MK+DSIEGIYDTLK CA+ISK+AG
Sbjct: 184 IETYNLMSQKYFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCALISKTAG 243
Query: 247 GIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHA 306
GIG++VH IRATGSYI GTNG+SNGIVPMLRVFN+TARYVDQGG KR GAFA+YLEPWHA
Sbjct: 244 GIGLNVHRIRATGSYIAGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIYLEPWHA 303
Query: 307 DIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTE 366
DIFEFLDLRKNHGKEE RARDLF ALW PDLFM+RV+ NG W+LFCPNEAPGLAD +G E
Sbjct: 304 DIFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNGDWTLFCPNEAPGLADVYGEE 363
Query: 367 FERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSS 426
FE LY KYEKEG+ + ++AQ LW+ IL++Q ETG P+ML+KD+CN+KSNQ+NLGTI+SS
Sbjct: 364 FEALYEKYEKEGRGRTTIKAQKLWYAILEAQTETGNPFMLYKDSCNRKSNQKNLGTIRSS 423
Query: 427 NLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLA 486
NLCTE+++YT+P E AVCNLASIALP +V + RG +DF KL
Sbjct: 424 NLCTEIVEYTAPDEVAVCNLASIALPTFVDAV--------------RGE----YDFGKLH 465
Query: 487 EVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQL 546
EVT +V NLN+IID N+YPVE ARRSN RHRPI +GVQGLAD F+ L +PFDS EA+ L
Sbjct: 466 EVTQVVVRNLNRIIDGNHYPVEEARRSNFRHRPIAVGVQGLADAFLALRLPFDSPEAKLL 525
Query: 547 NKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDM 606
N IFET+Y+ AL S E+A +GPY +Y GSPVS+GILQ DMW V P+D WDW GL+
Sbjct: 526 NTQIFETLYHAALTASCELAKVDGPYSSYEGSPVSQGILQYDMWNVTPTDLWDWDGLKAE 585
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
ISK+GVRNSLL+APMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN LL DL +
Sbjct: 586 ISKHGVRNSLLLAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWLLKDLVD 645
Query: 667 MGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQS 726
+GLWS +KN+II D GS+Q IP IP ++KA+YKTVWEI Q+T+V MA DRG +ID SQS
Sbjct: 646 LGLWSDNMKNRIIADGGSIQNIPNIPADIKALYKTVWEISQRTIVQMAADRGAFIDQSQS 705
Query: 727 LNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
LNIH+ +P GK+TS+HF W GLKTGMYYLR+ AA+ I+FTVD LK
Sbjct: 706 LNIHLKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEQLK 756
>gi|156043867|ref|XP_001588490.1| ribonucleotide reductase large subunit [Sclerotinia sclerotiorum
1980]
gi|154695324|gb|EDN95062.1| ribonucleotide reductase large subunit [Sclerotinia sclerotiorum
1980 UF-70]
Length = 910
Score = 1114 bits (2881), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/776 (66%), Positives = 621/776 (80%), Gaps = 18/776 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG++E V FDKITAR+ +L Y L +H D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKERVQFDKITARVSRLCYALDPDHIDAAAITQKVISGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK FS I+D+Y + N ++G +P+I+ +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSHVIRDLYQYTNPKNGKASPMISKET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
++ +M++ L+S I+YDRDF+Y YFGFKTLERSYLL++ GKV ERPQ M+MRVAVGIH
Sbjct: 121 FECVMRHEEELNSAIVYDRDFNYQYFGFKTLERSYLLRLDGKVAERPQQMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDI+SAI+TY++MS ++FTHASPTLF+AGTP+AQLSSCFL+ MK+DSI+GIYDTLK CA+
Sbjct: 181 DDIESAIETYNLMSNKYFTHASPTLFSAGTPQAQLSSCFLIDMKEDSIDGIYDTLKICAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+++H IRATG+YI GTNG SNGIVPMLRVFN+TARYVDQGG KR GAFAVY
Sbjct: 241 ISKNAGGIGLNIHRIRATGAYIAGTNGNSNGIVPMLRVFNNTARYVDQGGNKRPGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+FEFLDLRKNHGKEE RARDLFYALW+PDLFM+RV+ NG W+L CPNE PGLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVEKNGEWTLMCPNECPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LY YEK GK +K ++AQ LW+ IL++Q ETG P+ML+KD CNKKSNQ+NL
Sbjct: 361 DVYGEEFEALYESYEKAGKGRKTIKAQKLWYSILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++Y++P E A CNLASIALP +V + G+ +
Sbjct: 421 GTIRSSNLCTEIVEYSAPDEVACCNLASIALPTFVNM--------------NEGT----Y 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EV +V NLNKIID+NYYPV+ ARRSN RHRPI +GVQGLAD F+ L +PFDS
Sbjct: 463 DFQKLHEVVQVVVRNLNKIIDINYYPVQEARRSNFRHRPIAVGVQGLADAFLALRLPFDS 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+ LN IFETIY+ AL +S EIA GPYETY GSPVSKG LQ DMWGV PSD WDW
Sbjct: 523 PEAKHLNIQIFETIYHAALTSSVEIAKELGPYETYQGSPVSKGELQYDMWGVTPSDLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I ++G+RNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 DSLKQSIKQHGIRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL +MGLWS +KN+II D GS+Q IP IP ++KA+YKTVWEI Q+T+V MA DRG +
Sbjct: 643 LKDLVDMGLWSDNMKNRIIADGGSIQNIPNIPADIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
ID SQS+NIHM P GK+TS+HF W GLKTGMYYLR+ AA+ I+FTVD L
Sbjct: 703 IDQSQSMNIHMKDPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEAL 758
>gi|260947674|ref|XP_002618134.1| hypothetical protein CLUG_01593 [Clavispora lusitaniae ATCC 42720]
gi|238848006|gb|EEQ37470.1| hypothetical protein CLUG_01593 [Clavispora lusitaniae ATCC 42720]
Length = 858
Score = 1113 bits (2880), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/772 (65%), Positives = 631/772 (81%), Gaps = 16/772 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG +E V FDKITAR+++L YGL +H D V V+Q+V +GVY GVTT +LD LA
Sbjct: 1 MFVIKRDGHKEPVRFDKITARIQRLCYGLDSDHVDAVAVTQRVISGVYHGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA LAARI VSNLHK T K FS+ K +Y + N ++ L +P+I+++
Sbjct: 61 AETAAYMTTIHPDYAILAARIAVSNLHKQTTKQFSQVAKILYEYINPKTDLHSPMISEET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y II +NA L+S I+YDRDF+Y+YFGFKTLERSYLL+V GKV ERPQH++MRVAVGIH
Sbjct: 121 YKIICENADELNSAIVYDRDFNYNYFGFKTLERSYLLRVNGKVAERPQHLIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI+ I+TY++MSQR+FTH SPTLFNAGTP Q+SSCFLV MKDDSI+GIYDTLK CA+
Sbjct: 181 NDIERVIETYNLMSQRYFTHGSPTLFNAGTPSPQMSSCFLVAMKDDSIDGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+ +HNIR+TG+YI GTNGTSNGI+PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLHIHNIRSTGAYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+F+D+RKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF PNEAPGLA
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNGDWTLFSPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LY KYE+EG+ + V+AQ LW+ IL++Q ETGTP+ML+KD CNKK+NQ+NL
Sbjct: 361 DVYGDEFEALYEKYEREGRGRSTVKAQKLWYSILEAQTETGTPFMLYKDACNKKTNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G IKSSNLC E+++Y+SP E AVCNLASIALP +V + + + ++
Sbjct: 421 GIIKSSNLCCEIVEYSSPEEVAVCNLASIALPSFVE----------------KDASSSWY 464
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+F+KL EVT +VT NLN+IID N+YPVE ARRSN+R+RPI +GVQGLAD F+ L +PFDS
Sbjct: 465 NFDKLHEVTKVVTRNLNRIIDRNFYPVEEARRSNMRNRPIALGVQGLADAFMSLRLPFDS 524
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LN IFETIY+ A+ S E+A EGPYETY GSP SKG+LQ D+W PS+ WDW
Sbjct: 525 QEAKELNIQIFETIYHAAVEASIELAQEEGPYETYEGSPASKGLLQYDLWDRKPSELWDW 584
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ ++K+G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL+GEF +VN H+
Sbjct: 585 DTLKQNLAKHGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQIVNPHM 644
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W+ +KN II ++GS+Q +P +P+E+K +YKTVWEI QK ++DMA DR +
Sbjct: 645 LKDLVDLGIWNDNMKNNIIANNGSIQSLPNVPDEIKRLYKTVWEISQKHIIDMAADRAAF 704
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
ID SQSLNIH+ +P GKLTS+HF+ W +GLKTGMYYLR++AAA AI+FTVD
Sbjct: 705 IDQSQSLNIHIREPTMGKLTSMHFYGWKKGLKTGMYYLRTQAAAAAIQFTVD 756
>gi|145256649|ref|XP_001401473.1| ribonucleoside-diphosphate reductase large chain [Aspergillus niger
CBS 513.88]
gi|134058380|emb|CAK38565.1| unnamed protein product [Aspergillus niger]
gi|350632026|gb|EHA20394.1| hypothetical protein ASPNIDRAFT_57102 [Aspergillus niger ATCC 1015]
Length = 865
Score = 1113 bits (2880), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/777 (66%), Positives = 626/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG++E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK FS I D+Y++ N ++ AP+I+ +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSLVISDLYHYVNPKNNQPAPMISKET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+IIMK+A L+S I+YDRDF+Y++FGFKTLERSYLL++ GKV ERPQH+LMRVAVGIH
Sbjct: 121 YEIIMKHADELNSAIVYDRDFNYNFFGFKTLERSYLLRINGKVAERPQHLLMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI+ AI+TYH+MSQ++FTHASPTLFNAGTP+ QL+SCFLV MK+DSI+GIYDTLK CA+
Sbjct: 181 SDIEKAIETYHLMSQKYFTHASPTLFNAGTPQPQLASCFLVDMKEDSIDGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IR+TGSYI GTNGTSNG+VPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHRIRSTGSYIGGTNGTSNGLVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+D+FEFLDLRKNHGKEE RARDLFYALW PDLFM+RV++NG W+LFCPNEAPGLA
Sbjct: 301 LEPWHSDVFEFLDLRKNHGKEEVRARDLFYALWTPDLFMKRVEANGDWTLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EF+ LY KYEKEG+ ++ ++AQ LW+ IL++Q ETG P+ML+KD CNKKSNQ+NL
Sbjct: 361 DVYGDEFDALYEKYEKEGRGRRTIKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+I+Y++P E AVCNLAS+ALP +V +RG +
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASLALPTFVD--------------AARGE----Y 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL EV ++ NLNKIID+NYYPV A++SN RHRPI +GV GLAD F+ L +PFDS
Sbjct: 463 DFGKLHEVVQVLVRNLNKIIDINYYPVPEAKKSNFRHRPIALGVNGLADAFLALRLPFDS 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+QLN IFETIY+ L SS++A G YETY GSPVS+GILQ DMW P+D WDW
Sbjct: 523 AEARQLNIQIFETIYHAGLTASSDLAKEFGTYETYEGSPVSQGILQYDMWDRTPTDLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I++ GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 AALKAKIAQTGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++GLWS +KN+II + GSVQ IP IP ++KA+YKTVWEI Q+T++ MA DRG +
Sbjct: 643 LKDLVDLGLWSDNMKNRIIAEGGSVQNIPNIPSDIKALYKTVWEISQRTILQMAADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
ID SQSLNIH+ +P GK+TS+HF W GLKTGMYYLR+ AA+ I+FTVD LK
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFAGWKMGLKTGMYYLRTMAASAPIQFTVDQEQLK 759
>gi|195339753|ref|XP_002036481.1| GM11750 [Drosophila sechellia]
gi|194130361|gb|EDW52404.1| GM11750 [Drosophila sechellia]
Length = 812
Score = 1113 bits (2880), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/820 (62%), Positives = 651/820 (79%), Gaps = 31/820 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
+YV+KRDG+QE VHFDKIT+R++KL Y L+++ DPV ++ +V G+Y GVTT +LD LA
Sbjct: 12 LYVIKRDGRQEEVHFDKITSRIQKLCYNLNMDFVDPVTITLQVINGLYCGVTTQELDNLA 71
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA +T NHPDYA LAARI VSNLHK TKK+FS+ +D+YNH N+ + K PL+++
Sbjct: 72 AEIAAGLTCNHPDYAILAARIAVSNLHKETKKAFSDVFEDLYNHVNKETNQKVPLVSEFH 131
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+++ KNA RL+S IIYDRDF Y+YFGFKTLERSYLLK GK+ ERPQHMLMRVA+GIH
Sbjct: 132 YNVVKKNATRLNSSIIYDRDFGYNYFGFKTLERSYLLKRNGKIAERPQHMLMRVAIGIHG 191
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+A++TY+++S+R+FTHASPTLF A T R QLSSCFL+ M DSIEGI+ ++++CA+
Sbjct: 192 EDIDAAVETYNLLSERYFTHASPTLFAAATNRPQLSSCFLLTMTADSIEGIFKSVEQCAM 251
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++VH IRA G+ I GTNGTSNG+VPMLRVFN+ ARYVDQGGGKR GAFA+Y
Sbjct: 252 ISKSAGGIGLNVHCIRAKGTSICGTNGTSNGLVPMLRVFNNVARYVDQGGGKRPGAFAIY 311
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+D+FEFL+L+KN GKEE+RARDLFYALW+PDLFM+RV++NG WSL CP++ PGL
Sbjct: 312 LEPWHSDVFEFLELKKNTGKEENRARDLFYALWIPDLFMKRVEANGDWSLMCPHKCPGLH 371
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE+LY KYE+EG+A + V+AQ+LWF I+++Q+ETG PYMLFKD CN+KSNQQN+
Sbjct: 372 EVWGDEFEKLYEKYEQEGRANRTVKAQSLWFAIIEAQVETGNPYMLFKDACNRKSNQQNV 431
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++Y+SP E AVCNLASIAL +V + + +
Sbjct: 432 GTIKCSNLCTEIVEYSSPDEIAVCNLASIALNMFV-------------------TPEKTY 472
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EVT IVT+NLNKIID+NYYP+ AR+SNLRHRP+GIG+QG AD IL+ P++S
Sbjct: 473 DFKKLKEVTKIVTKNLNKIIDINYYPLPEARKSNLRHRPVGIGIQGFADALILMRFPYES 532
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA LN+ IFETIYY AL S E+A EG YETY GSPVSKGILQ DMW P++ WDW
Sbjct: 533 EEAGLLNQQIFETIYYGALEASCELAQTEGAYETYEGSPVSKGILQYDMWDKVPTNLWDW 592
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I K+GVRNSLLVAPMPTAST+QI+GNNE FEPYT+NIY+RRVLSGEF VVN HL
Sbjct: 593 QKLKESIKKHGVRNSLLVAPMPTASTAQIMGNNESFEPYTTNIYTRRVLSGEFQVVNHHL 652
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE+ LW +KN+II GS+Q I IP++++ +YKTVWEI K+ + MA DRG +
Sbjct: 653 LRDLTELDLWDDDMKNQIISSRGSIQNIETIPQKVRDLYKTVWEISVKSTIKMAADRGAF 712
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD-----TSV 775
ID SQS NIH+ +PN+GKLTS+HF++W GLKTGMYYLR++ AA+AI+FTV+ S+
Sbjct: 713 IDQSQSFNIHVAEPNYGKLTSIHFYSWKAGLKTGMYYLRTKPAANAIQFTVNKKQGAVSM 772
Query: 776 LKEN-------PKVTDDDDAKMAQMVCSLTNREECMACGS 808
+N K +D + KMA MVCSL N++ CM+CGS
Sbjct: 773 NGQNGTAEGSPQKYEEDRERKMADMVCSLENKDACMSCGS 812
>gi|386819560|ref|ZP_10106776.1| ribonucleoside-diphosphate reductase, alpha subunit [Joostella
marina DSM 19592]
gi|386424666|gb|EIJ38496.1| ribonucleoside-diphosphate reductase, alpha subunit [Joostella
marina DSM 19592]
Length = 810
Score = 1113 bits (2879), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/809 (64%), Positives = 647/809 (79%), Gaps = 30/809 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG++E + FDKITAR++KL YGL+ E DPV V+ +V G+Y GVTTS+LD LA
Sbjct: 1 MYVIKRDGRREPIMFDKITARVRKLCYGLN-ELVDPVKVAMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA MTT HPDYA LAARI VSNLHKNTKKSFSET+ D+YN+ N R+G APL++D+V
Sbjct: 60 AEIAATMTTTHPDYARLAARISVSNLHKNTKKSFSETMADLYNYVNPRTGKAAPLLSDEV 119
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y++I KNA +LDS IIY+RDF YDYFGFKTLERSYLLK+ GK+ ERPQHMLMRV+VGIH
Sbjct: 120 YEVIQKNADKLDSLIIYNRDFGYDYFGFKTLERSYLLKLNGKIAERPQHMLMRVSVGIHL 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD+DS ++TY +MS+++FTHA+PTLFN+GTP+ Q+SSCFL+ K+DSI+GIYDTLK+ A
Sbjct: 180 DDLDSVLETYELMSKKYFTHATPTLFNSGTPKPQMSSCFLITTKEDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HNIRATGSYI GTNGTSNGIVPML+VFNDTARYVDQGGGKRKG+FAVY
Sbjct: 240 ISQSAGGIGLSIHNIRATGSYIAGTNGTSNGIVPMLKVFNDTARYVDQGGGKRKGSFAVY 299
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWHADIF+FLDL+KNHGKEE RARDLFYA+W+PDLFM+RV+ NG W+L CPNE PGL
Sbjct: 300 IEPWHADIFDFLDLKKNHGKEEMRARDLFYAMWMPDLFMKRVEENGEWTLMCPNECPGLC 359
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D EF+ LY KYE EGK +K ++A+ LW +IL+SQIETGTPYML+KD N+KSNQ+NL
Sbjct: 360 DVHSDEFDALYLKYEAEGKGRKTIKARELWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++YTSP E AVCNLASIALP +V K F
Sbjct: 420 GTIRSSNLCTEIMEYTSPDEVAVCNLASIALPMFV--------------------KGNEF 459
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D ++L +VT VT NLN++ID NYYPVE AR SN RHRPIG+GVQGLADTFI L MPF S
Sbjct: 460 DHKELYKVTKRVTRNLNRVIDRNYYPVEEARNSNFRHRPIGLGVQGLADTFIKLRMPFTS 519
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP---SDR 597
EA++LN+DIFET+Y+ A+ S E+A EGPYETY GSP+S+G Q ++WG+ S
Sbjct: 520 DEAKKLNQDIFETLYFAAVTASMEMAKEEGPYETYKGSPISQGDFQHNLWGIKDDELSGN 579
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWDKLRKEVKKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
KHLL DL ++GLW+ +K +++ +GS+Q I IP++++ +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLEDLVDLGLWTEELKQELMRANGSIQHIETIPQDIRDLYKTVWELSMKDIIDMSRHR 699
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
G +ID SQSLN+ M+ N+ KLTS+HF+AW GLKTGMYYLR+++A DAIKFT+D
Sbjct: 700 GYFIDQSQSLNLFMEGANYAKLTSMHFYAWKSGLKTGMYYLRTKSAVDAIKFTLD----- 754
Query: 778 ENPKVTDDDDAKMAQMVCSLTNREECMAC 806
N K T+ A+ A++ S+ + +A
Sbjct: 755 -NTKKTEKVPAEAAEVKASVAGKAAPVAV 782
>gi|154297725|ref|XP_001549288.1| hypothetical protein BC1G_12274 [Botryotinia fuckeliana B05.10]
gi|347829519|emb|CCD45216.1| similar to ribonucleoside-diphosphate reductase subunit large
[Botryotinia fuckeliana]
Length = 909
Score = 1113 bits (2878), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/776 (66%), Positives = 619/776 (79%), Gaps = 18/776 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG++E V FDKITAR+ +L YGL +H D ++QKV +GVY+GV T +LD LA
Sbjct: 1 MYVYKRDGRKERVQFDKITARVSRLCYGLDPDHIDAAAITQKVISGVYQGVNTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK FS I+D+Y + N R+G +P+I+
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSHVIRDLYQYTNPRNGTASPMISKQT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+ +M++ L+S I+YDRDF+Y YFGFKTLERSYLL++ GKV ERPQ M+MRVAVGIH
Sbjct: 121 YECVMRHEEELNSAIVYDRDFNYQYFGFKTLERSYLLRLDGKVAERPQQMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDI+SAI+TY++MS ++FTHASPTLF+AGTP+AQLSSCFL+ MK+DSI+GIYDTLK CA+
Sbjct: 181 DDIESAIETYNLMSNKYFTHASPTLFSAGTPQAQLSSCFLIDMKEDSIDGIYDTLKICAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+++H IRATG+YI GTNG SNGIVPMLRVFN+TARYVDQGG KR GAFAVY
Sbjct: 241 ISKNAGGIGLNIHRIRATGAYIAGTNGNSNGIVPMLRVFNNTARYVDQGGNKRPGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+FEFLDLRKNHGKEE RARDLFYALW+PDLFM+RV+ NG W+L CPNE PGLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVEKNGEWTLMCPNECPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LY YEK GK +K ++AQ LW+ IL++Q ETG P+ML+KD CNKKSNQ+NL
Sbjct: 361 DVYGDEFEALYESYEKAGKGRKTIKAQKLWYSILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++Y++P E A CNLASIALP +V + G+ +
Sbjct: 421 GTIRSSNLCTEIVEYSAPDEVACCNLASIALPTFVNM--------------NEGT----Y 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EV +V NLNKIID+NYYPV AR+SN RHRPI +GVQGLAD F+ L +PFDS
Sbjct: 463 DFQKLHEVVQVVVRNLNKIIDINYYPVPEARKSNFRHRPIAVGVQGLADAFLALRLPFDS 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+ LN IFETIY+ AL +S EIA GPYETY GSPVSKG LQ DMWGV P+D WDW
Sbjct: 523 PEAKHLNIQIFETIYHAALTSSVEIAKELGPYETYQGSPVSKGELQYDMWGVTPTDLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I ++GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 DSLKQSIKQHGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL +MGLWS +KN+II D GS+Q IP IP ++KA+YKTVWEI Q+T+V MA DRG +
Sbjct: 643 LKDLVDMGLWSDNMKNRIIADGGSIQNIPNIPADIKALYKTVWEISQRTIVQMAADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
ID SQS+NIHM P GK+TS+HF W GLKTGMYYLR+ AA+ I+FTVD L
Sbjct: 703 IDQSQSMNIHMKDPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEAL 758
>gi|195473603|ref|XP_002089082.1| GE26085 [Drosophila yakuba]
gi|194175183|gb|EDW88794.1| GE26085 [Drosophila yakuba]
Length = 812
Score = 1112 bits (2877), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/820 (62%), Positives = 650/820 (79%), Gaps = 31/820 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
+YV+KRDG+QE VHFDKIT+R++KL Y L+++ DPV ++ +V G+Y GVTT +LD LA
Sbjct: 12 LYVIKRDGRQEEVHFDKITSRIQKLCYNLNMDFVDPVTITLQVINGLYCGVTTQELDNLA 71
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA +T NHPDYA LAARI VSNLHK TKK FS+ +D+Y H N+ + K PL+++
Sbjct: 72 AEIAAGLTCNHPDYAILAARIAVSNLHKETKKVFSDVFEDLYEHVNKETNQKVPLVSEFH 131
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+++ KNA RL+S IIYDRDF Y+YFGFKTLERSYLLK GK+ ERPQHMLMRVA+GIH
Sbjct: 132 YNVVKKNATRLNSSIIYDRDFGYNYFGFKTLERSYLLKRNGKIAERPQHMLMRVAIGIHG 191
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+A++TY+++S+R+FTHASPTLF A T R QLSSCFL+ M DSIEGI+ ++++CA+
Sbjct: 192 EDIDAAVETYNLLSERYFTHASPTLFAAATNRPQLSSCFLLTMTADSIEGIFKSVEQCAM 251
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++VH IRA G+ I GTNGTSNG+VPMLRVFN+ ARYVDQGGGKR GAFA+Y
Sbjct: 252 ISKSAGGIGLNVHCIRAKGTSICGTNGTSNGLVPMLRVFNNVARYVDQGGGKRPGAFAIY 311
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+D+FEFL+L+KN GKEE+RARDLFYALW+PDLFM+RV++NG WSL CP++ PGL
Sbjct: 312 LEPWHSDVFEFLELKKNTGKEENRARDLFYALWIPDLFMKRVEANGDWSLMCPHKCPGLQ 371
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG EFE+LY KYE+EG+A + V+AQ+LWF I+++Q+ETG PYMLFKD CN+KSNQQN+
Sbjct: 372 DVWGDEFEKLYEKYEQEGRANRTVKAQSLWFAIIEAQVETGNPYMLFKDACNRKSNQQNV 431
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++Y++P E AVCNLASIAL +V + + +
Sbjct: 432 GTIKCSNLCTEIVEYSAPDEIAVCNLASIALNMFV-------------------TPEKTY 472
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EVT IVT+NLNKIID+NYYP+ A++SNLRHRP+GIGVQG AD IL+ P++S
Sbjct: 473 DFKKLKEVTKIVTKNLNKIIDINYYPLPEAKKSNLRHRPVGIGVQGFADALILMRFPYES 532
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA LN+ IFETIYY AL S E+A EGPYETY GSPVSKGILQ DMW P++ WDW
Sbjct: 533 EEAGLLNQQIFETIYYGALEASCELAQAEGPYETYEGSPVSKGILQYDMWDKVPTNLWDW 592
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I ++GVRNSLLVAPMPTAST+QI+GNNE FEPYT+NIY+RRVLSGEF VVN HL
Sbjct: 593 QKLKESIKQHGVRNSLLVAPMPTASTAQIMGNNESFEPYTTNIYTRRVLSGEFQVVNHHL 652
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE+ LW +KN+II GS+Q I IP++++ +YKTVWEI K+ + MA DRG +
Sbjct: 653 LRDLTELDLWDDDMKNQIISSRGSIQNIEAIPQKVRDLYKTVWEISVKSTIKMAADRGAF 712
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD-----TSV 775
ID SQS NIH+ +PN+GKLTS+HF++W GLKTGMYYLR++ AA+AI+FTV+ S+
Sbjct: 713 IDQSQSFNIHVAEPNYGKLTSIHFYSWKAGLKTGMYYLRTKPAANAIQFTVNKKQGAVSI 772
Query: 776 LKEN-------PKVTDDDDAKMAQMVCSLTNREECMACGS 808
+N K +D + KMA MVCSL N++ CM+CGS
Sbjct: 773 NGQNGASEGSPQKFEEDRERKMADMVCSLENKDACMSCGS 812
>gi|17352481|ref|NP_477027.1| ribonucleoside diphosphate reductase large subunit [Drosophila
melanogaster]
gi|12644286|sp|P48591.2|RIR1_DROME RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleoside-diphosphate reductase
subunit M1; AltName: Full=Ribonucleotide reductase large
subunit
gi|4928448|gb|AAD33590.1|AF132143_1 ribonucleoside reductase M1 subunit [Drosophila melanogaster]
gi|21430662|gb|AAM51009.1| RE58177p [Drosophila melanogaster]
gi|22946135|gb|AAF52913.2| ribonucleoside diphosphate reductase large subunit [Drosophila
melanogaster]
gi|220942628|gb|ACL83857.1| RnrL-PA [synthetic construct]
Length = 812
Score = 1112 bits (2876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/820 (62%), Positives = 650/820 (79%), Gaps = 31/820 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
+YV+KRDG+QE VHFDKIT+R++KL Y L+++ DPV ++ +V G+Y GVTT +LD LA
Sbjct: 12 LYVIKRDGRQEEVHFDKITSRIQKLCYNLNMDFVDPVTITLQVINGLYCGVTTQELDNLA 71
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA +T NHPDYA LAARI VSNLHK TKK+FS+ +D+YNH N+ + K PL+++
Sbjct: 72 AEIAAGLTCNHPDYAILAARIAVSNLHKETKKAFSDVFEDLYNHVNKETNQKVPLVSEFH 131
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+++ KNA RL+S IIYDRDF Y+YFGFKTLERSYLLK GK+ ERPQHMLMRVA+GIH
Sbjct: 132 YNVVKKNATRLNSSIIYDRDFGYNYFGFKTLERSYLLKRNGKIAERPQHMLMRVAIGIHG 191
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+A++TY+++S+R+FTHASPTLF A T R QLSSCFL+ M DSIEGI+ ++++CA+
Sbjct: 192 EDIDAAVETYNLLSERYFTHASPTLFAAATNRPQLSSCFLLTMTADSIEGIFKSVEQCAM 251
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++VH IRA G+ I GTNGTSNG+VPMLRVFN+ ARYVDQGGGKR GAFA+Y
Sbjct: 252 ISKSAGGIGLNVHCIRAKGTSICGTNGTSNGLVPMLRVFNNVARYVDQGGGKRPGAFAIY 311
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+D+FEFL+L+KN GKEE+RARDLFYALW+PDLFM+RV++NG WSL CP++ PGL
Sbjct: 312 LEPWHSDVFEFLELKKNTGKEENRARDLFYALWIPDLFMKRVEANGDWSLMCPHKCPGLH 371
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG EFE+LY KYE+EG+A + V+AQ+LWF I+++Q+ETG PYMLFKD CN+KSNQQN+
Sbjct: 372 DVWGDEFEKLYEKYEQEGRANRTVKAQSLWFAIIEAQVETGNPYMLFKDACNRKSNQQNV 431
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++Y++P E AVCNLASIAL +V + + +
Sbjct: 432 GTIKCSNLCTEIVEYSAPDEIAVCNLASIALNMFV-------------------TPEKTY 472
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EVT IVT+NLNKIID+NYYP+ AR+SNLRHRP+GIG+QG AD IL+ P++S
Sbjct: 473 DFKKLKEVTKIVTKNLNKIIDINYYPLPEARKSNLRHRPVGIGIQGFADALILMRFPYES 532
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA LN+ IFETIYY AL S E+A EGPYETY GSPVSKGILQ DMW P++ WDW
Sbjct: 533 EEAGLLNQQIFETIYYGALEASCELAQTEGPYETYEGSPVSKGILQYDMWDKVPTNLWDW 592
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I +GVRNSLLVAPMPTAST+QI+GNNE FEPYT+NIY+RRVLSGEF VVN HL
Sbjct: 593 QKLKESIRMHGVRNSLLVAPMPTASTAQIMGNNESFEPYTTNIYTRRVLSGEFQVVNHHL 652
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE+ LW +KN+II GS+Q I IP +++ +YKTVWEI K+ + MA DRG +
Sbjct: 653 LRDLTELDLWDDDMKNQIISSRGSIQNIETIPPKVRDLYKTVWEISVKSTIKMAADRGAF 712
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD-----TSV 775
ID SQS NIH+ +PN+GKLTS+HF++W GLKTGMYYLR++ AA+AI+FTV+ S+
Sbjct: 713 IDQSQSFNIHVAEPNYGKLTSIHFYSWKAGLKTGMYYLRTKPAANAIQFTVNKKQGAVSM 772
Query: 776 LKEN-------PKVTDDDDAKMAQMVCSLTNREECMACGS 808
+N K +D + KMA MVCSL N++ CM+CGS
Sbjct: 773 NGQNGTAEGSPQKYEEDRERKMADMVCSLENKDACMSCGS 812
>gi|406863487|gb|EKD16534.1| ribonucleotide reductase large subunit [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 902
Score = 1112 bits (2876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/776 (66%), Positives = 621/776 (80%), Gaps = 18/776 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG++E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVFKRDGRKERVQFDKITARVSRLCYGLDAEHVDAAAITQKVISGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK FS I D+Y++ N R+ +P+I+
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSTVISDLYHYVNPRNKSASPMISQAT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+ +MK+ A L+S I+YDRDF+Y YFGFKTLERSYLL++ GK+ ERPQHM+MRVAVGIH
Sbjct: 121 YECVMKHEAELNSAIVYDRDFNYQYFGFKTLERSYLLRLDGKIAERPQHMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI+SAI+TY++MS ++FTHASPTLF AGTP+AQLSSCFL+ MK+DSI+GIYDTLK CA+
Sbjct: 181 NDIESAIETYNLMSSKYFTHASPTLFAAGTPQAQLSSCFLIDMKEDSIDGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATG+YI GTNG SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKNAGGIGLNVHRIRATGAYIAGTNGNSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+FEFLDLRKNHGKEE RARDLFYALW+PDLFM+RV+ NG W+L CPNE PGLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVEKNGEWTLMCPNECPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LY +YEKEGK +K ++AQ LW+ IL++Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DVYGEEFEALYEQYEKEGKGRKTIKAQKLWYSILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++Y +P E AVCNLAS+ALP YV ++ GS +
Sbjct: 421 GTIRSSNLCTEIVEYCAPDEVAVCNLASLALPTYVDQVS-----------GS-------Y 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+F+KL EV +V +NLNKIID+NYYPV AR+SN RHRPI +GVQGLAD F+ L +PF+S
Sbjct: 463 NFQKLHEVCQVVVKNLNKIIDINYYPVPEARKSNFRHRPIAVGVQGLADVFLALRLPFES 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+QLN IFETIY+ AL S E+A G YETY GSP SKG LQ DMW V P+D WDW
Sbjct: 523 PEAKQLNLQIFETIYHAALTGSVELAKLHGTYETYEGSPASKGELQYDMWNVTPTDLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I ++G+RNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 DSLKQQIKQHGLRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL +MGLWS +KN+II D GSVQ IP IP ++KA+YKTVWEI Q+T+V MA DRG Y
Sbjct: 643 LKDLVDMGLWSDNMKNRIIADGGSVQNIPNIPADIKALYKTVWEISQRTIVQMAADRGAY 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
ID SQS+NIHM P GK+TS+HF W GLKTGMYYLR+ AA+ I+FTVD L
Sbjct: 703 IDQSQSMNIHMKDPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEAL 758
>gi|46446982|ref|YP_008347.1| ribonucleoside-diphosphate reductase large chain [Candidatus
Protochlamydia amoebophila UWE25]
gi|46400623|emb|CAF24072.1| probable ribonucleoside-diphosphate reductase large chain
[Candidatus Protochlamydia amoebophila UWE25]
Length = 773
Score = 1112 bits (2876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/806 (64%), Positives = 646/806 (80%), Gaps = 35/806 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG+++ V FDKITAR+ KL YGL H DPVL++ KV G++ GVTTS+LD LA
Sbjct: 1 MFVTKRDGRKQEVKFDKITARILKLCYGLDSVHIDPVLIAMKVIEGLFDGVTTSELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA++T HPDYA LA+RI +SNL KNT KSF+ TI ++Y++ + ++G KA LIA+DV
Sbjct: 61 AEVAASLTVKHPDYALLASRIAISNLQKNTNKSFARTIGELYHYIDPKTGKKASLIAEDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y I+ +A LD+ +IYDRDF YDYFGFKTLERSYLLK+ GKV+ERPQH+LMRV++GIHK
Sbjct: 121 YKIVQNHAEILDATMIYDRDFGYDYFGFKTLERSYLLKINGKVIERPQHLLMRVSIGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI +AI+TYH MS+RWFTHA+PTLFNAGTP Q+SSCFL+ +K+DSIEGI+DTLK CA
Sbjct: 181 NDISAAIETYHWMSERWFTHATPTLFNAGTPYPQMSSCFLMQVKEDSIEGIFDTLKACAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS++AGGIG+S+HNIRATGSYIRGT G SNGI+PMLRV+NDTARY+DQGGGKRKG+FA+Y
Sbjct: 241 ISQAAGGIGLSIHNIRATGSYIRGTGGISNGIIPMLRVYNDTARYIDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADI+ FLDLRKNHGKEE RARDLF ALW+PDLFM+RV+ +G+WSLFCPNEAP L
Sbjct: 301 LEPWHADIYAFLDLRKNHGKEELRARDLFTALWIPDLFMKRVEEDGVWSLFCPNEAPNLH 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+CWG EFE LY YE+EGKA++V++AQ+LWF+IL+SQIETG PYMLFKD CN KSNQ++L
Sbjct: 361 ECWGEEFEHLYCLYEQEGKAREVIKAQDLWFKILESQIETGNPYMLFKDACNYKSNQKHL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+I+YTSP E AVCNLASIALPR++ N +F
Sbjct: 421 GTIKLSNLCTEIIEYTSPHEAAVCNLASIALPRFI--------------------INGHF 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D +KL EVT ++T NL+KIID N YP+ A+ SNL HRPIGIGVQGLAD FILL MPFDS
Sbjct: 461 DHQKLFEVTQVITRNLDKIIDENSYPIVEAQTSNLLHRPIGIGVQGLADAFILLRMPFDS 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+ LN+ IFETIY+ AL S ++A ++G Y +Y GSP+SKGILQ +MW V PS WDW
Sbjct: 521 KEARALNQAIFETIYFGALTASKDLAKKKGRYPSYEGSPISKGILQYEMWNVKPSSNWDW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+ +G+RNSLLVA MPTASTSQILGNNECFEPYTSN+Y+RRVLSGEF+VVNKHL
Sbjct: 581 EALKTEIAVHGIRNSLLVALMPTASTSQILGNNECFEPYTSNLYTRRVLSGEFIVVNKHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
+ DL + LW+ +K +I+ +GS+Q I +IP E+K +YKTVWEIKQK L+DMA DRG +
Sbjct: 641 MRDLVKRELWNEEMKQRILAANGSIQGIEEIPSEIKELYKTVWEIKQKALIDMAADRGPF 700
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
I SQSLN+ ++ P F KL+S+HF+AW +GLKTGMYYLR +AAA+AIKFTV+ + E P
Sbjct: 701 ICQSQSLNLFVESPTFAKLSSMHFYAWKKGLKTGMYYLRIKAAAEAIKFTVNQNY--EQP 758
Query: 781 KVTDDDDAKMAQMVCSLTNREECMAC 806
+ ++ CSL +C++C
Sbjct: 759 Q---------QEIACSL----DCLSC 771
>gi|339251084|ref|XP_003373025.1| ribonucleoside-diphosphate reductase large subunit [Trichinella
spiralis]
gi|316969123|gb|EFV53282.1| ribonucleoside-diphosphate reductase large subunit [Trichinella
spiralis]
Length = 833
Score = 1112 bits (2876), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/825 (63%), Positives = 639/825 (77%), Gaps = 42/825 (5%)
Query: 8 GKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAM 67
G++EAVHFDKIT+R+KKL YGL++EH +P+L+SQKV G+Y+GVTT +LD LAAE +A M
Sbjct: 27 GRREAVHFDKITSRIKKLCYGLNMEHIEPILISQKVIAGLYQGVTTVELDNLAAEISATM 86
Query: 68 TTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKN 127
TT HPDYA+LAARI VSNLHK TKK FS+ I D+Y N + +P+I+ V+ II N
Sbjct: 87 TTKHPDYATLAARIAVSNLHKETKKVFSDVIDDLYQWINPNTNKHSPMISPKVHQIIQAN 146
Query: 128 AARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAI 187
+ RL+S I+YDRDF Y YFGFKTLE+SYLLK+ GKV ERPQH+LMRVA+GIH+DDID+AI
Sbjct: 147 SQRLNSTIVYDRDFSYSYFGFKTLEKSYLLKINGKVAERPQHLLMRVAIGIHEDDIDAAI 206
Query: 188 KTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGG 247
+TY++MS++WFTHASPTLFNAGT R QLSSCFL+ MK DSIEGIYDTLKECAIISKSAGG
Sbjct: 207 ETYNLMSEKWFTHASPTLFNAGTCRPQLSSCFLITMKSDSIEGIYDTLKECAIISKSAGG 266
Query: 248 IGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHAD 307
IG++VH IRA+G+YI GTNG SNG++PMLRVFN+TARYVDQGG KR GAFAVYLEPWHAD
Sbjct: 267 IGLNVHCIRASGTYIAGTNGYSNGLLPMLRVFNNTARYVDQGGNKRPGAFAVYLEPWHAD 326
Query: 308 IFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEF 367
IF+FLD +KN G EE+RARDLFYALW+PDLFM+R++++G WSL CP+E PGLAD WG EF
Sbjct: 327 IFDFLDAKKNTGVEENRARDLFYALWIPDLFMKRIEADGDWSLMCPHECPGLADLWGDEF 386
Query: 368 ERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSN 427
E+LY KYE +GK K+ ++AQ LW+ I++SQIETGTP+M++KD CN+KSNQQNLGTIK SN
Sbjct: 387 EKLYEKYEAQGKHKRRIKAQQLWYAIIESQIETGTPFMVYKDACNRKSNQQNLGTIKCSN 446
Query: 428 LCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAE 487
LCTE++QY+SP ET+VCNLASIAL ++V R FDF KLAE
Sbjct: 447 LCTEIVQYSSPDETSVCNLASIALNKFV------------------NVAKREFDFAKLAE 488
Query: 488 VTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLN 547
VT +VT NLNKIID NYYPV A +SN RHRPIGIGVQGLAD FIL+ PF+S EA+ LN
Sbjct: 489 VTKVVTVNLNKIIDRNYYPVAVAEKSNKRHRPIGIGVQGLADAFILMRYPFESEEARLLN 548
Query: 548 KDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMI 607
K IFETIYY AL +S ++A + GPYETY GSP SKGILQ DMW V P+D WDW L+ I
Sbjct: 549 KKIFETIYYAALESSCDLAKQFGPYETYQGSPASKGILQYDMWNVQPTDLWDWESLKCRI 608
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEM 667
K G+RNSLL+APMPTAST+QILGNNE E YTSN+Y+RRVLSGEF +VN HL+ DL E+
Sbjct: 609 EKYGLRNSLLLAPMPTASTAQILGNNESVEAYTSNVYTRRVLSGEFQIVNHHLMKDLVEL 668
Query: 668 GLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSL 727
GLW +KN+II + GS+Q I IP E++ +YKTVWEI QK ++DMA +RG +ID SQSL
Sbjct: 669 GLWDESLKNEIIANKGSIQSIESIPAEIRELYKTVWEISQKCVIDMAAERGAFIDQSQSL 728
Query: 728 NIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL----------- 776
NIH+ +PN+ KLTS+HF+ W +GLKTGMYYLR++ A AI+FTVD L
Sbjct: 729 NIHIAEPNYAKLTSMHFYGWKKGLKTGMYYLRTKPAVTAIQFTVDKLALKQKKTKEEEEG 788
Query: 777 -----------KENPKVTDDDDAKMAQMV--CSLTNREECMACGS 808
++ P D+ + ++ C L N ECM C S
Sbjct: 789 QRPNGGYVDKSRKFPTSGDNWSNNVNALLQQCRLENGNECMLCSS 833
>gi|299743194|ref|XP_001835601.2| hypothetical protein CC1G_03383 [Coprinopsis cinerea okayama7#130]
gi|298405544|gb|EAU86172.2| hypothetical protein CC1G_03383 [Coprinopsis cinerea okayama7#130]
Length = 895
Score = 1112 bits (2875), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/781 (66%), Positives = 630/781 (80%), Gaps = 25/781 (3%)
Query: 2 YVVKRD-----GKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQL 56
YV KR ++E V FDKITAR+ KL YGL + DP+ V+QKV GVY+GVTT +L
Sbjct: 22 YVFKRGPDASYSRKERVQFDKITARISKLCYGLDLNFVDPIEVAQKVVVGVYQGVTTVEL 81
Query: 57 DELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLI 116
D LAAETAA +TT HPDYA LAARI VSNLHK TKKSFS+ +KD+Y + N ++G A +I
Sbjct: 82 DNLAAETAAYLTTKHPDYAVLAARIAVSNLHKETKKSFSQVMKDLYEYVNPKNGKPAGMI 141
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAV 176
+ + +++I NA LDS IIY+RDF+Y+YFGFKTLERSYLL++ G+V ERPQHM+MRVAV
Sbjct: 142 SKETWEVIRDNADTLDSAIIYNRDFNYNYFGFKTLERSYLLRLNGRVAERPQHMIMRVAV 201
Query: 177 GIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLK 236
GIH DID ++TY++MS+R+FTHASPTLFNAGTP QLSSCFLVCMKDDSIEGIYDTLK
Sbjct: 202 GIHGRDIDRVLETYNLMSERYFTHASPTLFNAGTPHPQLSSCFLVCMKDDSIEGIYDTLK 261
Query: 237 ECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGA 296
CA+ISK+AGGIG+++H IRATGSYI GTNG SNGIVPMLR ++ TARYVDQGG KR GA
Sbjct: 262 NCAMISKTAGGIGLNIHCIRATGSYIAGTNGYSNGIVPMLRAYDATARYVDQGGNKRPGA 321
Query: 297 FAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEA 356
FA+Y+EPWHAD+FEFLDLRKNHGKEE RARDLFYALW+PDLFM+RV+++G WSLFCPNEA
Sbjct: 322 FAIYIEPWHADVFEFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVEADGEWSLFCPNEA 381
Query: 357 PGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSN 416
PGL D EFE LY +YEKEG+A+K ++AQ LW+ IL++QIETG P+M++KD N KSN
Sbjct: 382 PGLHDVHSAEFEELYERYEKEGRARKTIRAQKLWYAILEAQIETGGPFMVYKDHANAKSN 441
Query: 417 QQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSK 476
Q+NLGTIKSSNLCTE+I+Y+SP ETAVCNLAS+ALP ++++ GV
Sbjct: 442 QKNLGTIKSSNLCTEIIEYSSPDETAVCNLASLALPTFIKD-GV---------------- 484
Query: 477 NRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGM 536
+DF+KL EVT +VT NLN+IIDVNYYP+ ARRSN+RHRPIGIGVQGLAD F+ L M
Sbjct: 485 ---YDFKKLHEVTKVVTYNLNRIIDVNYYPIPEARRSNMRHRPIGIGVQGLADAFMALRM 541
Query: 537 PFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSD 596
PFDS A++LN IFETIY+ AL SSEIAAR+GPYET+ GSP S+G LQ D+WGV PSD
Sbjct: 542 PFDSQAAKELNLQIFETIYHAALEASSEIAARDGPYETWEGSPASQGQLQYDLWGVKPSD 601
Query: 597 RWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVV 656
WDW L+ I+K G+RNSLL+APMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VV
Sbjct: 602 LWDWASLKAQIAKTGLRNSLLLAPMPTASTSQILGFNECFEPYTSNIYTRRVLAGEFQVV 661
Query: 657 NKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVD 716
LL +L ++GLW +KN II +GSVQ IP IP ++KAIYKTVWEI QK ++D+A D
Sbjct: 662 CPWLLRELVDLGLWDDNMKNLIIAHNGSVQNIPNIPADVKAIYKTVWEISQKKVIDLAAD 721
Query: 717 RGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
RG +I SQSLN+H+ P G+LTS+HF+ W +GLKTGMYYLR+R AA AI+FTVD S+L
Sbjct: 722 RGAFICQSQSLNVHLSAPTMGQLTSMHFYGWKKGLKTGMYYLRTRPAAQAIQFTVDQSLL 781
Query: 777 K 777
K
Sbjct: 782 K 782
>gi|325953831|ref|YP_004237491.1| ribonucleoside-diphosphate reductase subunit alpha [Weeksella
virosa DSM 16922]
gi|323436449|gb|ADX66913.1| ribonucleoside-diphosphate reductase, alpha subunit [Weeksella
virosa DSM 16922]
Length = 779
Score = 1111 bits (2874), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/808 (65%), Positives = 644/808 (79%), Gaps = 29/808 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KR+GKQEAVHFDKITAR+ KL YGLS++ D + +++KV G+Y VTT++LD LA
Sbjct: 1 MYVIKRNGKQEAVHFDKITARIHKLVYGLSVDEKDVIEIAKKVIQGIYDNVTTTELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA TT HPD+A LAARI VSNLHKNT KSFS+T K +Y++ + + +APL++++
Sbjct: 61 AETAATYTTVHPDFAVLAARISVSNLHKNTLKSFSKTAKLLYDYIDPVTNTRAPLLSEET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YDII NA +DS IIYDRD+++DYFGFKTLERSYL++ GKV ERPQH+ MRVA+GIHK
Sbjct: 121 YDIIRNNADEIDSSIIYDRDYNFDYFGFKTLERSYLIRTNGKVTERPQHLFMRVALGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI +AI+TY++MS++WF HA+PTLFN+GTP+ Q+SSCFL+ M +DSI GI+DTLK CA+
Sbjct: 181 QDIKAAIETYNLMSEKWFIHATPTLFNSGTPKPQMSSCFLLSMTEDSIVGIFDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYI+GT G SNGI+PMLRV+NDTARYVDQGGGKRKGA AVY
Sbjct: 241 ISQSAGGIGLSIHNVRATGSYIKGTGGISNGIIPMLRVYNDTARYVDQGGGKRKGAIAVY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+FL+LRKNHGKEE RARDLF ALW+PDLFM+RV+ N WSLF PNEAPGL
Sbjct: 301 LEPWHADIFDFLNLRKNHGKEEMRARDLFPALWIPDLFMQRVEENADWSLFDPNEAPGLY 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G+ FE LY YE +G +K V+A+ LW IL++QIETGTPYM +KD N+KSNQ+N+
Sbjct: 361 DVYGSSFEELYQHYENDGIFRKKVKARELWNAILEAQIETGTPYMCYKDAANEKSNQKNI 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G I+SSNLCTE+++YTS E AVCNLAS+ALPRYV E G F
Sbjct: 421 GVIRSSNLCTEIMEYTSADEVAVCNLASLALPRYVSENG--------------------F 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EVT IVT NLNK+ID NYYPV SN +HRPIG+GVQGLAD F+LL MPF+S
Sbjct: 461 DFQKLYEVTKIVTRNLNKVIDGNYYPVPETENSNFKHRPIGLGVQGLADVFLLLRMPFES 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
+A+QLNKDIFETIYY A+ +S E+A EG YE++ GSP+S+G Q D+W V PSDRWDW
Sbjct: 521 EKARQLNKDIFETIYYAAMESSMELAKEEGAYESFKGSPLSEGKFQFDLWNVQPSDRWDW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
GLR + + GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEFVVVNKHL
Sbjct: 581 KGLRKNVMEFGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYNRRVLSGEFVVVNKHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
+ DL E+ LW +KNK+I ++GSVQ I +IP LK +YKTVWEIKQKT++DMA DRG +
Sbjct: 641 IKDLIELNLWDARMKNKLIAENGSVQNIEEIPANLKELYKTVWEIKQKTIIDMAADRGAF 700
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
I SQSLN+ M +PN KLTS+HF+AW GLKTGMYYLR++AAADAIKFTV+
Sbjct: 701 ICQSQSLNLFMAEPNMAKLTSMHFYAWKSGLKTGMYYLRTKAAADAIKFTVE-------- 752
Query: 781 KVTDDDDAKMAQMVCSLTNREECMACGS 808
KV +D K + CSL N +EC+ CGS
Sbjct: 753 KVQSSED-KQVDISCSLDNPDECIVCGS 779
>gi|440804772|gb|ELR25641.1| ribonucleosidediphosphate reductase, alpha subunit [Acanthamoeba
castellanii str. Neff]
Length = 825
Score = 1111 bits (2873), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/783 (65%), Positives = 637/783 (81%), Gaps = 24/783 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLK---KLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLD 57
MYV+KRDG E V FDKIT RL+ +L L+ + DPVLV+QKV GVY GV T+QLD
Sbjct: 1 MYVIKRDGNPERVSFDKITRRLQVLCQLEPALASD-VDPVLVTQKVVQGVYNGVHTAQLD 59
Query: 58 ELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIA 117
LAAETAA M + +P Y LAARI +SNL K+T +S ET + ++ + N ++GL + LIA
Sbjct: 60 HLAAETAAYMGSLNPGYNVLAARIAISNLQKDTSESLLETARTLHTYVNSKTGLNSALIA 119
Query: 118 DDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVG 177
DDV+++I N L++ I Y+RDF+Y YFGFKTLERSYL +V GK+VERPQHMLMRVAVG
Sbjct: 120 DDVFEVIANNTEALEAAIKYERDFNYTYFGFKTLERSYLFRVDGKIVERPQHMLMRVAVG 179
Query: 178 IHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKE 237
+HKD+I + I+TY ++SQ+ FTHA+PTLFNAGTPR QLSSCFL+ MK+DSIEGIYDTLK+
Sbjct: 180 LHKDNIPAVIETYDLLSQQLFTHATPTLFNAGTPRPQLSSCFLLTMKEDSIEGIYDTLKQ 239
Query: 238 CAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAF 297
CA+ISKSAGGIG++ H IRA+ SYIRGTNGTSNG++PMLRV+NDTARYVDQGGGKRKGAF
Sbjct: 240 CALISKSAGGIGLAAHRIRASNSYIRGTNGTSNGLIPMLRVYNDTARYVDQGGGKRKGAF 299
Query: 298 AVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAP 357
A+YLEPWHADIF+FLDL+KNHGKEE+RARDLFY LW+PDLFM+RV++ G WSLFCPNEAP
Sbjct: 300 AIYLEPWHADIFDFLDLKKNHGKEENRARDLFYGLWIPDLFMKRVETGGDWSLFCPNEAP 359
Query: 358 GLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQ 417
GL D WG EFE Y +YE+EG+A++VV+AQ LWF IL+SQIETGTPYML+KD CN KSNQ
Sbjct: 360 GLFDSWGKEFEEKYERYEQEGRARRVVKAQELWFAILESQIETGTPYMLYKDACNGKSNQ 419
Query: 418 QNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKN 477
Q+LGTI+SSNLCTEV+QYTSP E AVCNLAS+ALP+++ N
Sbjct: 420 QHLGTIQSSNLCTEVVQYTSPDEVAVCNLASLALPKFI--------------------TN 459
Query: 478 RYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMP 537
FD +KL +V +VT+NLNK+ID+NYYPV AR SN+RHRPIGIGVQGLAD F+++ P
Sbjct: 460 GEFDHKKLHDVVKVVTKNLNKVIDINYYPVPEARNSNMRHRPIGIGVQGLADVFMIMRHP 519
Query: 538 FDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDR 597
++S EA++LN+ IFETIYY AL S+E+A EG Y+TY GSP SKG LQPD+WGV PSDR
Sbjct: 520 WESDEARELNRAIFETIYYAALVASNELAQVEGTYQTYEGSPASKGKLQPDLWGVVPSDR 579
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR I+++G+RNSLLVAPMPTASTSQILGNNECFEPYT+NIY+RR+L+G+F VVN
Sbjct: 580 WDWATLRANIAQHGLRNSLLVAPMPTASTSQILGNNECFEPYTTNIYTRRILAGDFTVVN 639
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
+HLL +L + GLWSP +KNK++ +GSVQ+I +IP+++K +YKTVWE+ Q+ ++DMA DR
Sbjct: 640 EHLLRELQQRGLWSPALKNKLVSHNGSVQRIEEIPDDIKKLYKTVWELPQRVIIDMAADR 699
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
YID SQSLN++M +P+F KLTS+HF+AW +GLKTGMYYLR+R AA+AI+FTVD
Sbjct: 700 SAYIDQSQSLNVYMGEPSFAKLTSMHFYAWRKGLKTGMYYLRTRPAANAIQFTVDQEAAA 759
Query: 778 ENP 780
P
Sbjct: 760 TVP 762
>gi|242765906|ref|XP_002341068.1| ribonucleotide reductase large subunit Rnr1, putative [Talaromyces
stipitatus ATCC 10500]
gi|218724264|gb|EED23681.1| ribonucleotide reductase large subunit Rnr1, putative [Talaromyces
stipitatus ATCC 10500]
Length = 873
Score = 1111 bits (2873), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/777 (66%), Positives = 625/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG++E V FDKITAR+ +L YGL +H D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MYVFKRDGRKERVQFDKITARVSRLCYGLDPDHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK FS I+D+Y++ N ++ AP+I+ ++
Sbjct: 61 AETAAYMTVTHPDYAVLAARIAVSNLHKQTKKQFSAVIEDLYHYVNPKNNKAAPMISPEM 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+ +MK+A L+S I+YDRDF+Y YFGFKTLERSYLL++ GKV ERPQHM+MRVAVGIH
Sbjct: 121 YETVMKHADELNSAIVYDRDFNYQYFGFKTLERSYLLRINGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
++I+ AI+TY++MSQ++FTHASPTLFNAGTPR QL+SCFLV MK+DSIEGIYDTLK CA+
Sbjct: 181 ENIEKAIETYNLMSQKYFTHASPTLFNAGTPRPQLASCFLVDMKEDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++VH IR+TGSYI GTNGTSNG+VPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLNVHRIRSTGSYIGGTNGTSNGLVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+D+FEFLDLRKNHGKEE RARDLFYALW PDLFM RV++N W+LFCPNEAPGLA
Sbjct: 301 LEPWHSDVFEFLDLRKNHGKEEVRARDLFYALWTPDLFMRRVEANQDWTLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EF+ LY KYEKEG+ ++ V+AQ LW+ IL++Q ETG P+ML+KD CNKKSNQ+NL
Sbjct: 361 DVYGEEFDALYEKYEKEGRGRRTVKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+I+Y +P E AVCNLAS+ALP +V +RG +
Sbjct: 421 GTIRSSNLCTEIIEYCAPDEVAVCNLASLALPTFVDT--------------ARGE----Y 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL EVT ++ NLNKIID+NYYPV A++SN RHRPI +GV GLAD F+ L +PFDS
Sbjct: 463 DFGKLHEVTQVLVRNLNKIIDINYYPVPEAKKSNFRHRPIAVGVNGLADAFLALRLPFDS 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+QLN IFETIY+ AL S E+A G YETY GSPVS+GILQ DMW P+D WDW
Sbjct: 523 PEAKQLNIQIFETIYHGALTASIELAKEYGTYETYEGSPVSQGILQYDMWDRTPTDLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I ++G+RNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 DALKAQIREHGIRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++GLWS +KN+II + GSVQ IP IP ++KA+YKTVWEI Q++++ MA DRG +
Sbjct: 643 LKDLVDLGLWSDNMKNRIIAEGGSVQNIPNIPADIKALYKTVWEISQRSILQMAADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
ID SQSLNIHM +P GK+TS+HF W GLKTGMYYLR+ AA+ I+FTVD LK
Sbjct: 703 IDQSQSLNIHMKEPTMGKITSMHFAGWKMGLKTGMYYLRTMAASAPIQFTVDQEQLK 759
>gi|255949828|ref|XP_002565681.1| Pc22g17720 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592698|emb|CAP99060.1| Pc22g17720 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 863
Score = 1110 bits (2872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/776 (66%), Positives = 623/776 (80%), Gaps = 18/776 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG++E V FDKITAR+ +L YGL EH D ++QKV +GVY+GV T +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHIDAAAITQKVISGVYQGVGTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK FS I D+Y++ N ++ AP+I+ +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSMVISDLYHYVNPKNNKPAPMISKEH 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+I+MK+A L+S I+YDRDF+Y++FGFKTLERSYLL++ G V ERPQH+LMRVAVGIH
Sbjct: 121 YEIVMKHAEELNSAIVYDRDFNYNFFGFKTLERSYLLRINGTVAERPQHLLMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI+ AI+TYH+MSQ++FTHASPTLFNA TP+ QL+SCFLV M DSIEGIYDTLK CA+
Sbjct: 181 EDIEKAIETYHLMSQKYFTHASPTLFNAATPQPQLASCFLVDMSADSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATGSYI GTNG+SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYIGGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+FEFLDLRKNHGKEE RARDLFYALW PDLFM+RV++NG W+LFCPNEAPGLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFYALWTPDLFMKRVEANGDWTLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EF+ LY KYE+EG+ +K ++AQ LW+ IL++Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DVYGEEFDALYAKYEQEGRGRKTIKAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+I+Y++P E AVCNLAS+ALP +V +RG +
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASLALPTFVD--------------SARGE----Y 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL EV ++ NLNKIID+NYYPV A++SN RHRPI +GV GLAD F+ L +PFDS
Sbjct: 463 DFGKLHEVVQVLVHNLNKIIDINYYPVPEAKKSNFRHRPIALGVNGLADAFLALRLPFDS 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+QLN IFETIY+ AL SS+IA + GPYETY GSPVS+GILQ DMW P+D WDW
Sbjct: 523 PEARQLNIQIFETIYHGALTASSDIAKKLGPYETYPGSPVSQGILQYDMWDRTPTDLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I++ GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 ASLKAKIAETGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++GLWS +KN+II D GSVQ IP IP ++KA+YKTVWEI Q+ ++ MA DRG Y
Sbjct: 643 LKDLVDLGLWSDNMKNRIIADGGSVQNIPNIPADIKALYKTVWEISQRNILQMAADRGAY 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
ID SQSLNIH+ +P GKLTS+HF W GLKTGMYYLR+ AA+ I+FTVD L
Sbjct: 703 IDQSQSLNIHLKEPTMGKLTSMHFAGWKMGLKTGMYYLRTMAASAPIQFTVDQEQL 758
>gi|358365971|dbj|GAA82592.1| ribonucleotide reductase large subunit RNR1 [Aspergillus kawachii
IFO 4308]
Length = 864
Score = 1110 bits (2872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/777 (66%), Positives = 626/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG++E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK FS I D+Y++ N ++ AP+I+ +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSLVISDLYHYVNPKNNAPAPMISKET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+IIMK+A L+S I+YDRDF+Y++FGFKTLERSYLL++ GKV ERPQH+LMRVAVGIH
Sbjct: 121 YEIIMKHADELNSAIVYDRDFNYNFFGFKTLERSYLLRINGKVAERPQHLLMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI+ AI+TY++MSQ++FTHASPTLFNAGTP+ QL+SCFLV MK+DSI+GIYDTLK CA+
Sbjct: 181 SDIEKAIETYNLMSQKYFTHASPTLFNAGTPQPQLASCFLVDMKEDSIDGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IR+TGSYI GTNGTSNG+VPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHRIRSTGSYIGGTNGTSNGLVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+D+FEFLDLRKNHGKEE RARDLFYALW PDLFM+RV++NG W+LFCPNEAPGLA
Sbjct: 301 LEPWHSDVFEFLDLRKNHGKEEVRARDLFYALWTPDLFMKRVEANGDWTLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EF+ LY KYEKEG+ ++ ++AQ LW+ IL++Q ETG P+ML+KD CNKKSNQ+NL
Sbjct: 361 DVYGDEFDALYEKYEKEGRGRRTIKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+I+Y++P E AVCNLAS+ALP +V +RG +
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASLALPTFVD--------------AARGE----Y 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL EV ++ NLNKIID+NYYPV A++SN RHRPI +GV GLAD F+ L +PFDS
Sbjct: 463 DFGKLHEVVQVLVRNLNKIIDINYYPVPEAKKSNFRHRPIALGVNGLADAFLALRLPFDS 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+QLN IFETIY+ L SS++A G YETY GSPVS+GILQ DMW P+D WDW
Sbjct: 523 AEARQLNIQIFETIYHAGLTASSDLAKEFGTYETYEGSPVSQGILQYDMWDRTPTDLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I++ GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 DSLKAKIAQTGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++GLWS +KN+II + GSVQ IP IP ++KA+YKTVWEI Q+T++ MA DRG +
Sbjct: 643 LKDLVDLGLWSDNMKNRIIAEGGSVQNIPNIPSDIKALYKTVWEISQRTILQMAADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
ID SQSLNIH+ +P GK+TS+HF W GLKTGMYYLR+ AA+ I+FTVD LK
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFAGWKMGLKTGMYYLRTMAASAPIQFTVDQEQLK 759
>gi|327301679|ref|XP_003235532.1| ribonucleoside-diphosphate reductase large subunit [Trichophyton
rubrum CBS 118892]
gi|326462884|gb|EGD88337.1| ribonucleoside-diphosphate reductase large subunit [Trichophyton
rubrum CBS 118892]
Length = 870
Score = 1110 bits (2872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/771 (66%), Positives = 621/771 (80%), Gaps = 18/771 (2%)
Query: 7 DGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAA 66
DG++E V FDKITAR+ +L YGL EH D ++Q+V +GVY+GVTT +LD LAAETAA
Sbjct: 4 DGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQRVISGVYQGVTTVELDNLAAETAAY 63
Query: 67 MTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMK 126
MT HPDYA LAARI VSNLHK TKK FS I D+Y++ N ++G AP+I++ +I+MK
Sbjct: 64 MTVTHPDYAILAARIAVSNLHKQTKKQFSSVIDDLYHYVNPKNGRPAPMISEKTREIVMK 123
Query: 127 NAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSA 186
+A L+S I+YDRDF+Y YFGFKTLERSYLL+ GKV ERPQHM+MRVAVGIH +D++
Sbjct: 124 HAEELNSAIVYDRDFNYQYFGFKTLERSYLLRTNGKVAERPQHMIMRVAVGIHGEDVEKV 183
Query: 187 IKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAG 246
I+TY++MSQ++FTHASPTLFNAGTP+ Q++SCFL+ MK+DSIEGIYDTLK CA+ISK+AG
Sbjct: 184 IETYNLMSQKYFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCALISKTAG 243
Query: 247 GIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHA 306
GIG++VH IRATGSYI GTNG+SNGIVPMLRVFN+TARYVDQGG KR GAFA+YLEPWHA
Sbjct: 244 GIGLNVHRIRATGSYIAGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIYLEPWHA 303
Query: 307 DIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTE 366
DIFEFLDLRKNHGKEE RARDLF ALW PDLFM+RV+ NG W+LFCPNEAPGLAD +G E
Sbjct: 304 DIFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNGDWTLFCPNEAPGLADVYGEE 363
Query: 367 FERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSS 426
FE LY KYEKEG+ + ++AQ LW+ IL++Q ETG P+ML+KD+CN+KSNQ+NLGTI+SS
Sbjct: 364 FEALYEKYEKEGRGRTTIKAQKLWYAILEAQTETGNPFMLYKDSCNRKSNQKNLGTIRSS 423
Query: 427 NLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLA 486
NLCTE+++YT+P E AVCNLASIALP +V + RG +DF KL
Sbjct: 424 NLCTEIVEYTAPDEVAVCNLASIALPTFVDAV--------------RGE----YDFGKLH 465
Query: 487 EVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQL 546
EVT +V NLN+IID N+YPVE ARRSN RHRPI +GVQGLAD F+ L +PFDS EA+ L
Sbjct: 466 EVTQVVVRNLNRIIDGNHYPVEEARRSNFRHRPIAVGVQGLADAFLALRLPFDSPEAKLL 525
Query: 547 NKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDM 606
N IFET+Y+ AL S E+A +GPY +Y GSPVS+GILQ DMW V P+D WDW GL+
Sbjct: 526 NTQIFETLYHAALTASCELAKVDGPYSSYEGSPVSQGILQYDMWNVTPTDLWDWDGLKAE 585
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
ISK+GVRNSLL+APMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN LL DL +
Sbjct: 586 ISKHGVRNSLLLAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWLLKDLVD 645
Query: 667 MGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQS 726
+GLWS +KN+II D GS+Q I IP ++KA+YKTVWEI Q+T+V MA DRG +ID SQS
Sbjct: 646 LGLWSDNMKNRIIADGGSIQNISNIPADIKALYKTVWEISQRTIVQMAADRGAFIDQSQS 705
Query: 727 LNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
LNIH+ +P GK+TS+HF W GLKTGMYYLR+ AA+ I+FTVD LK
Sbjct: 706 LNIHLKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEQLK 756
>gi|340522103|gb|EGR52336.1| large subunit of ribonucleoside-diphosphate reductase [Trichoderma
reesei QM6a]
Length = 931
Score = 1110 bits (2871), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 517/781 (66%), Positives = 623/781 (79%), Gaps = 25/781 (3%)
Query: 4 VKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDEL---- 59
++ DG+QE V FDKITAR+ +L YGL EH DPV ++QKV +GVY GVTT QLD+L
Sbjct: 26 LRLDGRQERVQFDKITARVSRLCYGLDTEHVDPVAITQKVISGVYGGVTTVQLDDLVSLH 85
Query: 60 ---AAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLI 116
AAETAA MT HPDYA LAARI VSNLHK TKK +S + D+Y++ N ++ +P+I
Sbjct: 86 ELVAAETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSAVVSDLYHYVNPKNNRASPMI 145
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAV 176
+ D Y+ +M++ LDS I+YDRDF+Y YFGFKTLERSYLLK+ GK+VERPQHM+MRVAV
Sbjct: 146 SKDTYECVMRHKEELDSAIVYDRDFNYQYFGFKTLERSYLLKLDGKIVERPQHMIMRVAV 205
Query: 177 GIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLK 236
GI DDI+ ++TYH+MS ++FTHASPTLFNAGTP+AQLSSCFLV MKDDSIEGIYDTLK
Sbjct: 206 GIWGDDIERVLETYHLMSSKFFTHASPTLFNAGTPQAQLSSCFLVDMKDDSIEGIYDTLK 265
Query: 237 ECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGA 296
CA+ISK AGGIG++VH IRATGSYI GTNGTSNGI+PMLRVFN+TARYVDQGG KR GA
Sbjct: 266 TCAMISKMAGGIGLNVHRIRATGSYIAGTNGTSNGIIPMLRVFNNTARYVDQGGNKRPGA 325
Query: 297 FAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEA 356
FA+YLEPWHAD+F+FLDLRKNHGKEE RARDLF ALW+PDLFM+RV+ N W+L CPNE
Sbjct: 326 FAIYLEPWHADVFDFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNLDWTLMCPNEC 385
Query: 357 PGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSN 416
PGLADC+G EFE LY KYE+EG+ +K ++AQ LW+ IL++Q ETG P+ML+KD CN+KSN
Sbjct: 386 PGLADCYGEEFEALYEKYEREGRGRKTIRAQKLWYSILEAQTETGNPFMLYKDHCNRKSN 445
Query: 417 QQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSK 476
Q+NLGTI+SSNLCTE+I+Y +P E AVCNLAS+ALP +V
Sbjct: 446 QKNLGTIRSSNLCTEIIEYCAPDEVAVCNLASLALPAFV------------------DYN 487
Query: 477 NRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGM 536
+DF+KL EVT +V NLN+IIDVN+YPV+ AR SN+RHRPIG+GVQGLAD F+ L +
Sbjct: 488 EGCYDFKKLHEVTKVVVRNLNRIIDVNHYPVQEARNSNMRHRPIGVGVQGLADAFLALRL 547
Query: 537 PFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSD 596
PF+S EA++LNK IFETIY+ AL S EIA EGPYE++ GSP S+GILQ DMW V PSD
Sbjct: 548 PFESPEARELNKQIFETIYHAALEASMEIAKVEGPYESFKGSPASEGILQYDMWDVKPSD 607
Query: 597 RWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVV 656
W+W L++ I ++GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VV
Sbjct: 608 LWEWDSLKEQIKEHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVV 667
Query: 657 NKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVD 716
N LL DL + GLWS +KN+II ++GS+Q IP IPE++KA+YKTVWEI Q+ +V MA D
Sbjct: 668 NPWLLKDLVDTGLWSDAMKNRIIAENGSIQNIPNIPEDIKALYKTVWEISQRQIVQMAAD 727
Query: 717 RGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
RG +ID SQSLNIHM P GK+TS+HF W GLKTGMYYLR++AAA I+FTVD L
Sbjct: 728 RGAFIDQSQSLNIHMKDPTMGKITSMHFTGWKLGLKTGMYYLRTQAAAAPIQFTVDQQAL 787
Query: 777 K 777
K
Sbjct: 788 K 788
>gi|403170913|ref|XP_003330173.2| ribonucleoside-diphosphate reductase large chain [Puccinia graminis
f. sp. tritici CRL 75-36-700-3]
gi|375168944|gb|EFP85754.2| ribonucleoside-diphosphate reductase large chain [Puccinia graminis
f. sp. tritici CRL 75-36-700-3]
Length = 872
Score = 1110 bits (2871), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/806 (64%), Positives = 631/806 (78%), Gaps = 29/806 (3%)
Query: 3 VVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAE 62
V KRDG++E V FDKITAR+ KL YGL H +P+ +++KV GV+ GVTT +LD LAAE
Sbjct: 4 VYKRDGRREKVAFDKITARINKLCYGLDNVHVEPIEITKKVINGVFNGVTTVELDNLAAE 63
Query: 63 TAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYD 122
TAA MTT HPDYA LAARI +SNLHK TKK FS+ I+D+Y + N +G + +I+ + Y+
Sbjct: 64 TAAYMTTRHPDYAVLAARIAISNLHKETKKLFSQVIEDLYTYVNPINGRPSSMISQETYE 123
Query: 123 IIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDD 182
+ NA L+S +IYDRDF+Y+YFGFKTLERSYLL+++GKV ERPQHMLMRVAVGIH D
Sbjct: 124 AVQANAEALNSAVIYDRDFNYNYFGFKTLERSYLLRIKGKVAERPQHMLMRVAVGIHGMD 183
Query: 183 IDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIIS 242
++ AI+TY++MS+++FTHASPTLFNAGTP QLSSCFLV K DSI+GIYDTLK CA+IS
Sbjct: 184 VEKAIRTYNLMSEKYFTHASPTLFNAGTPHPQLSSCFLVASKSDSIDGIYDTLKTCAMIS 243
Query: 243 KSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLE 302
KSAGGIG+ ++NIRATGSYI GTNG SNGIVPMLRVFN+TARYVDQGG KR GAFA+YLE
Sbjct: 244 KSAGGIGLHINNIRATGSYISGTNGYSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIYLE 303
Query: 303 PWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADC 362
PWHAD+F++LDLRKNHGKEE RARDLFYALW+PDLFM RV+ N W LFCP EAPGLAD
Sbjct: 304 PWHADVFDWLDLRKNHGKEESRARDLFYALWIPDLFMSRVEKNQDWPLFCPAEAPGLADV 363
Query: 363 WGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGT 422
+G EFE L+ KYEKE +AKK V+AQ LW+ IL++Q ETG P+ML+KD NKKSNQ+NLGT
Sbjct: 364 YGEEFEALFAKYEKENRAKKTVKAQKLWYAILEAQTETGNPFMLYKDAANKKSNQKNLGT 423
Query: 423 IKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDF 482
IKSSNLCTE+I+Y++P E AVCNLASIALP Y+ + +DF
Sbjct: 424 IKSSNLCTEIIEYSAPDEVAVCNLASIALPTYIVDGK--------------------YDF 463
Query: 483 EKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTE 542
KL EVT VT NLNKIIDVNYYPV A++SN+RHRPIGIGVQGLAD F +L +PF+S E
Sbjct: 464 NKLHEVTKEVTYNLNKIIDVNYYPVPEAKKSNMRHRPIGIGVQGLADAFQILKLPFESPE 523
Query: 543 AQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGG 602
A++LN IFET+Y+ +L S+E+A +EGPYET+ GSP S+GILQ DMW V PSD W+W
Sbjct: 524 AKKLNTQIFETLYHASLEASNELAIKEGPYETFPGSPASQGILQFDMWNVKPSDLWEWDS 583
Query: 603 LRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLH 662
L++ + G+RNSLL+APMPTASTSQILG NECFEPYTSNIY+RRVL+GEF +VN LL
Sbjct: 584 LKEKVKTTGIRNSLLLAPMPTASTSQILGFNECFEPYTSNIYTRRVLAGEFQIVNPWLLK 643
Query: 663 DLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYID 722
+L EMGLW +KN+II GS+Q IP IP E+KA+YKTVWEI QK ++DMA DRG +ID
Sbjct: 644 ELVEMGLWDDEMKNRIIAHQGSIQNIPNIPTEMKAVYKTVWEISQKIILDMAADRGAFID 703
Query: 723 HSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKV 782
SQSLNIH+ P FG+LTS+HF+AW +GLKTGMYYLR+RAAA+AI+FTVD +
Sbjct: 704 QSQSLNIHLQAPTFGQLTSMHFYAWKKGLKTGMYYLRTRAAANAIQFTVDKKL------- 756
Query: 783 TDDDDAKMAQMVCSLTNREECMACGS 808
D+AK A +L + + S
Sbjct: 757 --QDEAKAANKAATLVSSSATLLVPS 780
>gi|67528364|ref|XP_661984.1| RIR1_NEUCR Ribonucleoside-diphosphate reductase large chain
(Ribonucleotide reductase large subunit) [Aspergillus
nidulans FGSC A4]
gi|40741107|gb|EAA60297.1| RIR1_NEUCR Ribonucleoside-diphosphate reductase large chain
(Ribonucleotide reductase large subunit) [Aspergillus
nidulans FGSC A4]
gi|259482810|tpe|CBF77645.1| TPA: ribonucleoside-diphosphate reductase large chain (Eurofung)
[Aspergillus nidulans FGSC A4]
Length = 865
Score = 1109 bits (2869), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/786 (65%), Positives = 633/786 (80%), Gaps = 22/786 (2%)
Query: 7 DGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAA 66
DG++E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LAAETAA
Sbjct: 21 DGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLAAETAAY 80
Query: 67 MTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMK 126
MT HPDYA LAARI VSNLHK TKK FS I D+Y++ N ++ AP+I+ + Y+I+MK
Sbjct: 81 MTVTHPDYAILAARIAVSNLHKQTKKQFSLVISDLYHYVNPKNKKPAPMISKETYEIVMK 140
Query: 127 NAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSA 186
+A L+S I+YDRDF+Y++FGFKTLERSYLL++ GK+ ERPQH+LMRVAVGIH +DI+ A
Sbjct: 141 HAEELNSAIVYDRDFNYNFFGFKTLERSYLLRLDGKIAERPQHLLMRVAVGIHGNDIERA 200
Query: 187 IKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAG 246
I+TY++MSQ++FTHASPTLFNAGTP+ QL+SCFLV MK+DSI+GIYDTLK CA+ISK+AG
Sbjct: 201 IETYNLMSQKYFTHASPTLFNAGTPQPQLASCFLVDMKEDSIDGIYDTLKTCAMISKTAG 260
Query: 247 GIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHA 306
GIG++VH IRATGSYI GTNG+SNGIVPMLRVFN+TARYVDQGG KR GAFA+YLEPWHA
Sbjct: 261 GIGLNVHRIRATGSYIAGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIYLEPWHA 320
Query: 307 DIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTE 366
D+FEFLDLRKNHGKEE RARDLFYALW PDLFM+RV++NG W+LFCPNEAPGLAD +G E
Sbjct: 321 DVFEFLDLRKNHGKEEVRARDLFYALWTPDLFMKRVEANGDWTLFCPNEAPGLADVYGDE 380
Query: 367 FERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSS 426
F+ LY +YEKEG+ ++ ++AQ LW+ IL++Q ETG P+ML+KD CNKKSNQ+NLGTI+SS
Sbjct: 381 FDALYEQYEKEGRGRRTIKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKNLGTIRSS 440
Query: 427 NLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLA 486
NLCTE+I+YT+P E AVCNLAS+ALP +V SRG +DF KL
Sbjct: 441 NLCTEIIEYTAPDEVAVCNLASLALPTFVD--------------ASRGE----YDFGKLH 482
Query: 487 EVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQL 546
EV ++ NLNKIID+NYYPV A++SN RHRPI +GV GLAD F+ L +PFDS EA+QL
Sbjct: 483 EVVQVLVRNLNKIIDINYYPVPEAKKSNFRHRPIALGVNGLADAFLALRLPFDSAEAKQL 542
Query: 547 NKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDM 606
N IFETIY+ AL SS +A +GPYE+Y GSPVS+GILQ DMW P+D WDW L+
Sbjct: 543 NIQIFETIYHAALTASSNLAKEDGPYESYEGSPVSQGILQYDMWERTPTDLWDWDALKAK 602
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
I++ GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN LL DL +
Sbjct: 603 IAQTGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWLLKDLVD 662
Query: 667 MGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQS 726
+GLWS +KN+II + GSVQ IP IP+++KA+YKTVWEI Q+ +++MA DRG YID SQS
Sbjct: 663 LGLWSDNMKNRIIAEGGSVQNIPNIPDDIKALYKTVWEISQRRILEMAADRGAYIDQSQS 722
Query: 727 LNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDD 786
LNIH+ +P GK+TS+HF W GLKTGMYYLR+ AA+ I+FTVD +E KV D +
Sbjct: 723 LNIHLKEPTMGKITSMHFAGWKMGLKTGMYYLRTMAASAPIQFTVD----QEQLKVADTN 778
Query: 787 DAKMAQ 792
A+ ++
Sbjct: 779 VARTSK 784
>gi|425781620|gb|EKV19574.1| Ribonucleoside-diphosphate reductase [Penicillium digitatum PHI26]
gi|425782887|gb|EKV20768.1| Ribonucleoside-diphosphate reductase [Penicillium digitatum Pd1]
Length = 861
Score = 1109 bits (2869), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/776 (66%), Positives = 622/776 (80%), Gaps = 18/776 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG++E V FDKITAR+ +L YGL EH D ++QKV +GVY+GV T +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVGTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK FS I D+Y++ N ++ AP+I+
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSMVISDLYHYVNPKNNKPAPMISKQH 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+I+MK+A L+S I+YDRDF+Y+YFGFKTLERSYLL++ G V ERPQH+LMRVAVGIH
Sbjct: 121 YEIVMKHAEELNSAIVYDRDFNYNYFGFKTLERSYLLRISGNVAERPQHLLMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI+ AI+TYH+MSQ++FTHASPTLFNA TP+ QL+SCFLV + DSIEGIYDTLK CA+
Sbjct: 181 EDIEKAIETYHLMSQKYFTHASPTLFNAATPQPQLASCFLVDVSADSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATGSYI GTNG+SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNVHRIRATGSYISGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+FEFLDLRKNHGKEE RARDLFYALW PDLFM+RV++NG W+LFCPNEAPGLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFYALWTPDLFMKRVEANGDWTLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EF+ LYTKYE+EG+ +K ++AQ LW+ IL++Q ETG P+ML+KD CNKKSNQ+NL
Sbjct: 361 DVYGDEFDALYTKYEQEGRGRKTIKAQKLWYAILEAQTETGNPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++Y++P E AVCNLAS+ALP +V +RG +
Sbjct: 421 GTIRSSNLCTEIVEYSAPDEVAVCNLASLALPTFVD--------------SARGE----Y 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL EV ++ NLNKIID+NYYPV A++SN RHRPI +GV GLAD F+ L +PFDS
Sbjct: 463 DFGKLHEVVQVLVHNLNKIIDINYYPVPEAKKSNFRHRPIALGVNGLADAFLALRLPFDS 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+QLN IFETIY+ AL SS+IA + G YETY GSPVS+GILQ DMW P+D WDW
Sbjct: 523 PEARQLNIQIFETIYHGALTASSDIAKKLGTYETYPGSPVSQGILQYDMWDRTPTDLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I++ GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 ASLKAKIAETGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++GLWS +KN+II D GSVQ IP IP ++KA+YKTVWEI Q+ ++ MA DRG +
Sbjct: 643 LKDLVDLGLWSDNMKNRIIADGGSVQNIPNIPADIKALYKTVWEISQRNILQMAADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
ID SQSLNIH+ +P GKLTS+HF W GLKTGMYYLR+ AA+ I+FTVD L
Sbjct: 703 IDQSQSLNIHLKEPTMGKLTSMHFAGWKMGLKTGMYYLRTMAASAPIQFTVDQEQL 758
>gi|423315656|ref|ZP_17293561.1| ribonucleoside-diphosphate reductase, alpha subunit [Bergeyella
zoohelcum ATCC 43767]
gi|405585760|gb|EKB59563.1| ribonucleoside-diphosphate reductase, alpha subunit [Bergeyella
zoohelcum ATCC 43767]
Length = 777
Score = 1109 bits (2869), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/808 (64%), Positives = 650/808 (80%), Gaps = 31/808 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+GK+EAVHFDKITAR+ KL YGLSI D + +++KV G+Y VTT++LD LA
Sbjct: 1 MFVIKRNGKKEAVHFDKITARIHKLIYGLSISEKDVIEIAKKVIQGIYDNVTTTELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAAA TT HPD++ LAARI VSNLHKNT KSFS+T + +Y + + + APLI++++
Sbjct: 61 AETAAAQTTIHPDFSVLAARIAVSNLHKNTLKSFSKTAQLLYEYTDPITQTHAPLISEEI 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y II KNA LDS +IYDRD+++DYFGFKTLERSYL++ GKV ERPQH+ MRVA+GIHK
Sbjct: 121 YKIIRKNADELDSSVIYDRDYNFDYFGFKTLERSYLIRTNGKVTERPQHLFMRVALGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI +AI+TY++MS++WF HA+PTLFNAGTP+ Q+SSCFL+ M +DSI GI+DTLK CA+
Sbjct: 181 EDIQAAIETYNLMSEKWFIHATPTLFNAGTPKPQMSSCFLLSMTEDSIAGIFDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIGVS+HNIR+TGSYI+GT G SNGI+PMLRVFNDTARYVDQGGGKRKGA AVY
Sbjct: 241 ISQSAGGIGVSIHNIRSTGSYIKGTGGISNGIIPMLRVFNDTARYVDQGGGKRKGAIAVY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWH+DIF+F+D+RKNHGKEE RARDLF ALW+ DLFM+RV+++ +WSLF PNEA GL
Sbjct: 301 IEPWHSDIFDFIDIRKNHGKEEMRARDLFPALWISDLFMQRVEADQMWSLFDPNEAQGLY 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ +G +F LYT YE EGK +K ++A+ LW IL++QIETGTPYM +KD N+KSNQ+N+
Sbjct: 361 EVYGEKFNELYTTYENEGKFRKQIKARELWTAILEAQIETGTPYMCYKDAVNEKSNQKNI 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++YT+ E AVCNLAS+ALPRYV + G F
Sbjct: 421 GTIRSSNLCTEIMEYTNADEVAVCNLASLALPRYVSDKG--------------------F 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EVT IVT NLNKIID NYYP+ + SN RHRPIG+GVQGLAD F+LL +PF+S
Sbjct: 461 DFQKLYEVTKIVTRNLNKIIDGNYYPIPETKTSNDRHRPIGLGVQGLADVFLLLRLPFES 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
A++LNKDIFETIY+ ++ S E+A +G Y ++ GSP+S+G Q D+W V PSDRWDW
Sbjct: 521 EAARKLNKDIFETIYFASMEASMELAKEQGAYSSFAGSPLSEGKFQFDLWQVAPSDRWDW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+ + +GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY+RRVLSGEFVVVNK L
Sbjct: 581 EKLRNEVMTHGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYNRRVLSGEFVVVNKFL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL E+GLW+P +KNK+I ++GSVQ IP+IP ELK +YKTVWEIKQKT++DMA +RG +
Sbjct: 641 LKDLIELGLWNPTMKNKLIAENGSVQNIPEIPTELKELYKTVWEIKQKTIIDMAAERGAF 700
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
I SQSLN+ M +PNF KLTS+HFHAW GLKTGMYYLR++AA DAIKFTVDT +L
Sbjct: 701 ICQSQSLNLFMAEPNFAKLTSMHFHAWKSGLKTGMYYLRTKAAVDAIKFTVDTQIL---- 756
Query: 781 KVTDDDDAKMAQMVCSLTNREECMACGS 808
+ +Q+ CSL N EEC+ACGS
Sbjct: 757 -------SGQSQVACSLDNPEECLACGS 777
>gi|302915563|ref|XP_003051592.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256732531|gb|EEU45879.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 893
Score = 1109 bits (2868), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/795 (65%), Positives = 626/795 (78%), Gaps = 27/795 (3%)
Query: 1 MYVVKR-----DGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQ 55
M+V KR DG+QE V FDKITAR+ +L YGL ++H DPV ++QKV +GVY GVTT Q
Sbjct: 1 MFVRKRADNLSDGRQERVQFDKITARVSRLCYGLDMDHVDPVAITQKVISGVYGGVTTVQ 60
Query: 56 LDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPL 115
LD+LAAETAA MT HPDYA LAARI VSNLHK TKK +S + D+Y++ N ++ +P+
Sbjct: 61 LDDLAAETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSAVVSDLYHYVNPKNDRASPM 120
Query: 116 IADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVA 175
I+ + Y+ +M++ LDS I+YDRDF Y YFGFKTLERSYLLK+ GK+VERPQHM+MRVA
Sbjct: 121 ISQETYECVMRHKEELDSAIVYDRDFQYQYFGFKTLERSYLLKIDGKIVERPQHMIMRVA 180
Query: 176 VGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTL 235
VGI D+I+ ++TY++MS ++FTHASPTLFNAGTP+ QLSSCFLV MK+DSIEGIYDTL
Sbjct: 181 VGIWGDNIERVLETYNLMSSKFFTHASPTLFNAGTPQPQLSSCFLVDMKEDSIEGIYDTL 240
Query: 236 KECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG 295
K CA+ISK AGGIG++VH IRATGSYI GTNGTSNG+ PMLRVFN+TARYVDQGG KR G
Sbjct: 241 KTCAMISKMAGGIGLNVHRIRATGSYIAGTNGTSNGVTPMLRVFNNTARYVDQGGNKRPG 300
Query: 296 AFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNE 355
AFA+YLEPWHAD+FEFLDLRKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+L CPNE
Sbjct: 301 AFAIYLEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNGDWTLMCPNE 360
Query: 356 APGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKS 415
PGLADC+G EFE LY KYEK GK +K ++AQ LW+ IL++Q ETG P+ML+KD CN+KS
Sbjct: 361 CPGLADCYGEEFEALYEKYEKAGKGRKTMKAQKLWYAILEAQTETGNPFMLYKDHCNRKS 420
Query: 416 NQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGS 475
NQ+NLGTI+SSNLCTE+I+Y +P E AVCNLAS+ALP ++
Sbjct: 421 NQKNLGTIRSSNLCTEIIEYCAPDEVAVCNLASLALPSFI------------------NY 462
Query: 476 KNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLG 535
+DF+KL EVT V NLN+IIDVN+YPV AR SN+RHRPIG+GVQGLAD F+ L
Sbjct: 463 DEACYDFQKLHEVTQTVVRNLNRIIDVNHYPVPEARNSNMRHRPIGVGVQGLADAFLALR 522
Query: 536 MPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPS 595
MPF+S EA++LNK IFETIY+ AL S ++A EGPY T+ GSP S+GILQ DMW V PS
Sbjct: 523 MPFESPEARELNKQIFETIYHAALTASVQLAKEEGPYSTFKGSPASEGILQFDMWNVKPS 582
Query: 596 DRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVV 655
D WDW LR+ + ++G RNSLL+APMPTASTSQILGNNECFEPYTSNIY RRVL+GEF V
Sbjct: 583 DLWDWESLREQVKEHGTRNSLLLAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQV 642
Query: 656 VNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAV 715
VN LL DL +MGLWS +KN+II ++GS+Q IP IP E+KA+YKTVWEI Q+ +V MA
Sbjct: 643 VNPWLLKDLVDMGLWSDSMKNRIIAENGSIQNIPNIPAEVKALYKTVWEISQRQVVQMAA 702
Query: 716 DRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
DRG +ID SQSLNIHM P GK+TS+HF W GLKTGMYYLR++AAA I+FTVD
Sbjct: 703 DRGAFIDQSQSLNIHMKDPTMGKITSMHFAGWKLGLKTGMYYLRTQAAAAPIQFTVDQQA 762
Query: 776 LKENPKVTDDDDAKM 790
L KV D + A++
Sbjct: 763 L----KVADANSAQI 773
>gi|194859786|ref|XP_001969450.1| GG23946 [Drosophila erecta]
gi|190661317|gb|EDV58509.1| GG23946 [Drosophila erecta]
Length = 812
Score = 1108 bits (2867), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/820 (62%), Positives = 646/820 (78%), Gaps = 31/820 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
+YV+KRDG+QE VHFDKIT+R++KL Y L+++ DPV ++ +V G+Y GVTT +LD LA
Sbjct: 12 LYVIKRDGRQEEVHFDKITSRIQKLCYNLNMDFVDPVTITLQVINGLYCGVTTQELDNLA 71
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA +T HPDYA LAARI VSNLHK TKK+FS+ +D+YNH N+ + K L+++
Sbjct: 72 AEIAAGLTCYHPDYAILAARIAVSNLHKETKKAFSDVFEDLYNHVNKETNQKVSLVSEFH 131
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+++ KNA RL+S IIYDRDF Y+YFGFKTLERSYLLK GK+ ERPQHMLMRVA+GIH
Sbjct: 132 YNVVKKNATRLNSSIIYDRDFGYNYFGFKTLERSYLLKTNGKIAERPQHMLMRVAIGIHG 191
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+A++TY+++S+R+FTHASPTLF A T R QLSSCFL+ M DSIEGI+ ++++CA+
Sbjct: 192 EDIDAAVETYNLLSERYFTHASPTLFAAATNRPQLSSCFLLTMTADSIEGIFKSVEQCAM 251
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++VH IRA G+ I GTNGTSNG+VPMLRVFN+ ARYVDQGGGKR GAFA+Y
Sbjct: 252 ISKSAGGIGLNVHCIRAKGTSICGTNGTSNGLVPMLRVFNNVARYVDQGGGKRPGAFAIY 311
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+D+FEFL+L+KN GKEE+RARDLFYALW+PDLFM+RV++NG WSL CP++ PGL
Sbjct: 312 LEPWHSDVFEFLELKKNTGKEENRARDLFYALWIPDLFMKRVEANGDWSLMCPHKCPGLQ 371
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG EFE+LY KYE+EG+A + V+AQ+LW+ I+++Q+ETG PYMLFKD CN+KSNQQN+
Sbjct: 372 DVWGDEFEKLYEKYEQEGRANRTVKAQSLWYAIIEAQVETGNPYMLFKDACNRKSNQQNV 431
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++Y++P E AVCNLASIAL +V + + +
Sbjct: 432 GTIKCSNLCTEIVEYSAPDEIAVCNLASIALNMFV-------------------TPEKTY 472
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EVT IVT NLNKIID+NYYP+ AR+SNLRHRP+GIG+QG AD IL+ P++S
Sbjct: 473 DFKKLKEVTKIVTRNLNKIIDINYYPLPEARKSNLRHRPVGIGIQGFADALILMRFPYES 532
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA LN+ IFETIYY AL S E+A EGPYETY GSPVSKGILQ DMW P++ WDW
Sbjct: 533 EEAGLLNQQIFETIYYGALEASCELAQTEGPYETYEGSPVSKGILQYDMWDKVPTNLWDW 592
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I K+GVRNSLLVAPMPTAST+QI+GNNE FEPYT+NIY+RRVLSGEF VVN HL
Sbjct: 593 QKLKESIKKHGVRNSLLVAPMPTASTAQIMGNNESFEPYTTNIYTRRVLSGEFQVVNHHL 652
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE+ LW +KN+II GS+Q I IP+ ++ +YKTVWEI K+ + MA DRG +
Sbjct: 653 LRDLTELDLWDDDMKNQIISSRGSIQNIEAIPQRVRDLYKTVWEISVKSTIKMAADRGAF 712
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE-- 778
ID SQS NIH+ +PN+GKLTS+HF++W GLKTGMYYLR++ AA+AI+FTV+ E
Sbjct: 713 IDQSQSFNIHVAEPNYGKLTSIHFYSWKAGLKTGMYYLRTKPAANAIQFTVNKKKGAEGI 772
Query: 779 ----------NPKVTDDDDAKMAQMVCSLTNREECMACGS 808
+ + +D + KMA MVCSL N++ CM+CGS
Sbjct: 773 NGQNGTSDESSKQFEEDRERKMADMVCSLENKDACMSCGS 812
>gi|241672125|ref|XP_002411450.1| ribonucleotide reductase, alpha subunit, putative [Ixodes
scapularis]
gi|215504101|gb|EEC13595.1| ribonucleotide reductase, alpha subunit, putative [Ixodes
scapularis]
Length = 779
Score = 1108 bits (2866), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/808 (64%), Positives = 652/808 (80%), Gaps = 29/808 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
++ + G++E VHFDKIT+R++KL YGL+++ DP L++QKV G+Y GVTT +LD LA
Sbjct: 1 IFYIVSGGRRETVHFDKITSRIQKLCYGLNMDFVDPCLITQKVINGLYPGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA LAARI +SNLHK TKK FSE ++D+YN +E++ L+ P+I+D+
Sbjct: 61 AETAATMTTKHPDYAILAARIAISNLHKETKKVFSEVVEDLYNMVSEKTRLRTPMISDET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y I+M+NA +S IIYDRDF+Y++FGFKTLERSYLLK+ GKVVERPQHMLMRV+VGIH
Sbjct: 121 YKIVMENAEAFNSAIIYDRDFNYNFFGFKTLERSYLLKINGKVVERPQHMLMRVSVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D++S + TY++MS++WFTHASPTLFN+GTPR QLSSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 ADVESVLNTYNLMSEKWFTHASPTLFNSGTPRPQLSSCFLLQMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV++H IRA+GSYI GTNGTSNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVNIHCIRASGSYIAGTNGTSNGLVPMLRVYNNTARYVDQGGNKRPGAFAMY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+F+FLDL+KN GKEE+RARDLFYALW+PDLFM RV+ + +WSL CP+E PGL
Sbjct: 301 LEPWHADVFDFLDLKKNTGKEENRARDLFYALWIPDLFMRRVEQDQMWSLMCPHECPGLH 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ +G +FE+LYTKYE E + ++ VQAQ LW+ IL+SQIETGTPYML+KD CN KSNQ+NL
Sbjct: 361 EVYGEDFEKLYTKYEGEKRYRRQVQAQQLWYAILESQIETGTPYMLYKDACNSKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTEVI+YT+P E AVCNLASIAL R+V E GS F
Sbjct: 421 GTIKCSNLCTEVIEYTAPDEVAVCNLASIALNRFVHE-------------GS-------F 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EV+ ++T+NLN+IID+N+YP+ A +SN HRPIGIGVQGLADTFILL +PFD
Sbjct: 461 DFQKLREVSQVITKNLNRIIDINFYPIPEAEKSNKSHRPIGIGVQGLADTFILLRLPFDC 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
+A+ LNK IFETIYY AL S ++A GPYETY G PVS+GILQ DMWGV P+D WDW
Sbjct: 521 EKARLLNKQIFETIYYGALEASCDLAKELGPYETYPGCPVSQGILQYDMWGVTPTDMWDW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I++ GVRNSLL+APMPTAST+QILGNNE EPYTSNIYSRRVLSGEF VVN+HL
Sbjct: 581 AALKARIAQYGVRNSLLLAPMPTASTAQILGNNESIEPYTSNIYSRRVLSGEFQVVNQHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLT+ GLW+ +KN +I ++GSVQ++ IP++LK +Y+TVWEI QK ++ MA DRG +
Sbjct: 641 LKDLTDRGLWNEDLKNSLIANNGSVQEL-DIPDDLKELYRTVWEIPQKNILQMAADRGAF 699
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
+D SQSLN+H+ QPN+GKLTS+HF W GLKTGMYYLR++ AA AI+FTVD + L++
Sbjct: 700 VDQSQSLNVHIAQPNYGKLTSMHFFGWKLGLKTGMYYLRTKPAASAIQFTVDKTALRKK- 758
Query: 781 KVTDDDDAKMAQMVCSLTNREECMACGS 808
+M + CSL N++EC+ C +
Sbjct: 759 -------EQMNAVTCSLKNKDECLMCSA 779
>gi|315056831|ref|XP_003177790.1| ribonucleoside-diphosphate reductase large subunit [Arthroderma
gypseum CBS 118893]
gi|311339636|gb|EFQ98838.1| ribonucleoside-diphosphate reductase large subunit [Arthroderma
gypseum CBS 118893]
Length = 870
Score = 1108 bits (2866), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/771 (66%), Positives = 621/771 (80%), Gaps = 18/771 (2%)
Query: 7 DGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAA 66
DG++E V FDKITAR+ +L YGL EH D ++Q+V +GVY+GVTT +LD LAAETAA
Sbjct: 4 DGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQRVISGVYQGVTTVELDNLAAETAAY 63
Query: 67 MTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMK 126
MT HPDYA LAARI VSNLHK TKK FS I D+Y++ N ++G AP+I++ +I+MK
Sbjct: 64 MTVTHPDYAILAARIAVSNLHKQTKKQFSSVIDDLYHYVNPKNGRPAPMISEKTREIVMK 123
Query: 127 NAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSA 186
+A L+S I+YDRDF+Y YFGFKTLERSYLL+ GKV ERPQHM+MRVAVGIH +D++
Sbjct: 124 HAEELNSAIVYDRDFNYQYFGFKTLERSYLLRTNGKVAERPQHMIMRVAVGIHGEDVEKV 183
Query: 187 IKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAG 246
I+TY++MSQ++FTHASPTLFNAGTP+ Q++SCFL+ MK+DSIEGIYDTLK CA+ISK+AG
Sbjct: 184 IETYNLMSQKYFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCALISKTAG 243
Query: 247 GIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHA 306
GIG++VH IRATGSYI GTNG+SNGIVPMLRVFN+TARYVDQGG KR GAFA+YLEPWHA
Sbjct: 244 GIGLNVHRIRATGSYIAGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIYLEPWHA 303
Query: 307 DIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTE 366
DIFEFLDLRKNHGKEE RARDLF ALW PDLFM+RV+ NG W+LFCPNEAPGLAD +G E
Sbjct: 304 DIFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNGDWTLFCPNEAPGLADVYGEE 363
Query: 367 FERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSS 426
FE LY KYEK+G+ + ++AQ LW+ IL++Q ETG P+ML+KD+CN+KSNQ+NLGTI+SS
Sbjct: 364 FEALYEKYEKDGRGRSTIKAQKLWYAILEAQTETGNPFMLYKDSCNRKSNQKNLGTIRSS 423
Query: 427 NLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLA 486
NLCTE+++YT+P E AVCNLASIALP +V + RG +DF KL
Sbjct: 424 NLCTEIVEYTAPDEVAVCNLASIALPTFVDAV--------------RGE----YDFGKLH 465
Query: 487 EVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQL 546
EVT +V NLN+IID N+YPVE ARRSN RHRPI +GVQGLAD F+ L +PFDS EA+ L
Sbjct: 466 EVTQVVVRNLNRIIDGNHYPVEEARRSNFRHRPIAVGVQGLADAFLALRLPFDSPEAKLL 525
Query: 547 NKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDM 606
N IFET+Y+ AL S E+A +GPY +Y GSPVS+GILQ DMW V P+D WDW L+
Sbjct: 526 NIQIFETLYHAALTASCELAKADGPYSSYEGSPVSQGILQYDMWNVTPTDLWDWDSLKSD 585
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
ISK+GVRNSLL+APMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN LL DL +
Sbjct: 586 ISKHGVRNSLLLAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWLLKDLVD 645
Query: 667 MGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQS 726
+GLWS +KN+II D GS+Q +P IP ++KA+YKTVWEI Q+T+V MA DRG +ID SQS
Sbjct: 646 LGLWSDNMKNRIIADGGSIQNVPNIPADIKALYKTVWEISQRTIVQMAADRGAFIDQSQS 705
Query: 727 LNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
LNIH+ +P GK+TS+HF W GLKTGMYYLR+ AA+ I+FTVD LK
Sbjct: 706 LNIHLKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEQLK 756
>gi|367034670|ref|XP_003666617.1| hypothetical protein MYCTH_2311451 [Myceliophthora thermophila ATCC
42464]
gi|347013890|gb|AEO61372.1| hypothetical protein MYCTH_2311451 [Myceliophthora thermophila ATCC
42464]
Length = 911
Score = 1107 bits (2864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/778 (66%), Positives = 632/778 (81%), Gaps = 20/778 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG+QE V FDKITAR+ +L YGL ++H DPV ++QKV +GVY GVTT+QLD+LA
Sbjct: 1 MYVRKRDGRQERVQFDKITARVSRLCYGLDMDHVDPVAITQKVISGVYGGVTTAQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK +S + D+Y++ N ++G +P+IA +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSSVVSDLYHYVNPKNGKPSPMIAKET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+ +M++ DS I+YDRDF+Y YFGFKTLERSYLLK+ GK+VERPQHM+MRVAVGI
Sbjct: 121 YECVMRHKDEFDSAIVYDRDFNYQYFGFKTLERSYLLKLDGKIVERPQHMIMRVAVGIWG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D+++ I+TY++MS ++FTHASPTLFNAGTP+AQLSSCFLV MKDDSIEGIYDTLK CA+
Sbjct: 181 DNVERVIETYNLMSNKFFTHASPTLFNAGTPQAQLSSCFLVDMKDDSIEGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+++H IRATGSYI GTNGTSNGI+PMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKMAGGIGLNIHRIRATGSYIAGTNGTSNGIIPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+FEFLDLRKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+L CPNE PGLA
Sbjct: 301 LEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNGEWTLMCPNECPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EFE LY +YE+EG+ ++ V+AQ LW+ IL++Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 361 DCYGEEFEALYERYEREGRGRRTVRAQKLWYAILEAQTETGNPFMLYKDHCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVR-EMGVPMESHPSKLVGSRGSKNRY 479
GTI+SSNLCTE+I+Y++P E AVCNLAS+ALP++V GV
Sbjct: 421 GTIRSSNLCTEIIEYSAPDEVAVCNLASLALPQFVDYNEGV------------------- 461
Query: 480 FDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFD 539
+DF+KL EVT +V NLN+IID+N+YPV+ A SN+RHRPIG+GVQGLAD F+ L MPF+
Sbjct: 462 YDFKKLHEVTQVVVRNLNRIIDINHYPVKEAYNSNMRHRPIGVGVQGLADAFLALRMPFE 521
Query: 540 STEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWD 599
S EA++LNK IFETIY+ AL S ++A +GPY TY GSPVS+GILQ DMW V PSD WD
Sbjct: 522 SPEARELNKQIFETIYHAALTASCDLAKEQGPYSTYEGSPVSQGILQYDMWNVKPSDLWD 581
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L+ I ++GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY RRVL+GEF VVN
Sbjct: 582 WDALKAKIKEHGVRNSLLIAPMPTASTSQILGNNECFEPYTSNIYQRRVLAGEFQVVNPW 641
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL DL +MGLWS +KN+II + GS+Q IP IP ++KA+YKTVWEI Q+T+V MA DRG
Sbjct: 642 LLKDLVDMGLWSDNMKNRIIAEGGSIQNIPNIPADIKALYKTVWEISQRTIVQMAADRGA 701
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
+ID SQSLNIHM +P GK+TS+HF W GLKTGMYYLR++AAA I+FTVD L+
Sbjct: 702 FIDQSQSLNIHMREPTMGKITSMHFTGWKLGLKTGMYYLRTQAAAQPIQFTVDQEALR 759
>gi|221125331|ref|XP_002156185.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
isoform 1 [Hydra magnipapillata]
Length = 821
Score = 1107 bits (2864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/810 (62%), Positives = 644/810 (79%), Gaps = 12/810 (1%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR G+QE HFDKIT+R+KKL +GL +++ P ++ KV G+Y G+TT +LD LA
Sbjct: 18 MFVIKRGGRQEECHFDKITSRIKKLCFGLDMKYISPYAITWKVIRGMYPGITTVELDTLA 77
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA+MTT HPDYA LAARI +SNLHK TKK FS+TI D+YN+ + + P+++++V
Sbjct: 78 AEVAASMTTKHPDYALLAARIAISNLHKETKKKFSDTIADLYNYISPEINMNCPMVSEEV 137
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y I+ KN RLD II RDF+Y YFGFKTLERSYLLK+ GK ERPQHMLMRV+VGIH
Sbjct: 138 YQIVQKNKERLDGAIISSRDFEYHYFGFKTLERSYLLKINGKTAERPQHMLMRVSVGIHG 197
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+D+D+AI+TY++MS++WFTHASPTLFN+GTPR Q+SSCFL+ M+ DSIEGI+DT+K+CAI
Sbjct: 198 EDLDAAIETYNLMSEKWFTHASPTLFNSGTPRPQMSSCFLLAMQSDSIEGIFDTVKQCAI 257
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+ +H IR++GSYI GTNG SNGI+PMLRVFN+TARYVDQGG KR G+ A+Y
Sbjct: 258 ISKWAGGIGLHIHCIRSSGSYIAGTNGHSNGIIPMLRVFNNTARYVDQGGNKRPGSIAIY 317
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADI +FLDL+KN GKEE RARDLF+ LWVPDLFM RV+ G+WSL CP+E PGLA
Sbjct: 318 LEPWHADIIDFLDLKKNTGKEEQRARDLFFGLWVPDLFMRRVEEKGMWSLMCPHECPGLA 377
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EFE LY KYE EG+ +K + AQ LWF IL+SQ ETGTPYML+KD+CN+KSNQ+NL
Sbjct: 378 DCYGEEFEELYQKYESEGRYRKQIPAQKLWFAILESQTETGTPYMLYKDSCNRKSNQKNL 437
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRY--VREMGVPMESHPSKLVGSRGSKNR 478
GT+K SNLCTE+++YTS E AVCNLASI++ + V V + S +KLV K
Sbjct: 438 GTLKCSNLCTEILEYTSSDEIAVCNLASISVNSFVTVNSETVTLPSGETKLV-----KTG 492
Query: 479 YFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPF 538
+DF+KL VT ++T NLNK+ID N+YPV AR SN+RHRPIGIGVQGLAD FIL+ PF
Sbjct: 493 VYDFKKLKYVTKVITRNLNKVIDRNFYPVPEARNSNMRHRPIGIGVQGLADAFILMRFPF 552
Query: 539 DSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRW 598
+S EA LNK IFETIYY AL S E+A ++G YE+Y GSP+SKGILQ DMW V P++ W
Sbjct: 553 ESDEASLLNKQIFETIYYGALEASCELAEKDGTYESYQGSPISKGILQYDMWNVTPTNLW 612
Query: 599 DWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNK 658
+W L+ I+ +GVRNSLLVAPMPTAST+QILGNNE EPYT+NIYSRRVLSGEF VVNK
Sbjct: 613 NWAELKAKIALHGVRNSLLVAPMPTASTAQILGNNESIEPYTNNIYSRRVLSGEFQVVNK 672
Query: 659 HLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRG 718
HL+ DLT++ LW +KN +I +GSVQ I +IP ++K +YKT WEIKQK+L++MA DRG
Sbjct: 673 HLMKDLTDLNLWDDNMKNTLIAHNGSVQNIDEIPADIKVLYKTAWEIKQKSLINMAADRG 732
Query: 719 CYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE 778
+ID SQS N+ + +P+F LT++HF+ W +GLKTGMYYLR++ AA+AI+FTVD + LK+
Sbjct: 733 AFIDQSQSFNVFLGEPSFSTLTAIHFYGWKKGLKTGMYYLRTKPAANAIQFTVDQNKLKQ 792
Query: 779 --NPKVTDDDDAKMAQMVCSLTNREECMAC 806
N K TDDD + ++CSL N+++CM+C
Sbjct: 793 SNNLKQTDDD---LKSLICSLENKDQCMSC 819
>gi|115398293|ref|XP_001214738.1| ribonucleoside-diphosphate reductase large chain [Aspergillus
terreus NIH2624]
gi|114192929|gb|EAU34629.1| ribonucleoside-diphosphate reductase large chain [Aspergillus
terreus NIH2624]
Length = 886
Score = 1107 bits (2864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/789 (65%), Positives = 633/789 (80%), Gaps = 22/789 (2%)
Query: 3 VVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAE 62
V DG++E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LAAE
Sbjct: 25 VFPADGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLAAE 84
Query: 63 TAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYD 122
TAA MT HPDYA LAARI VSNLHK TKK FS I D++++ N R+ AP+I+ + Y+
Sbjct: 85 TAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSLVISDLFHYVNPRNNKPAPMISKETYE 144
Query: 123 IIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDD 182
+MK+A L+S I+YDRDF+Y++FGFKTLERSYLL++ GKV ERPQH+LMRVAVGIH +D
Sbjct: 145 TVMKHADELNSAIVYDRDFNYNFFGFKTLERSYLLRINGKVAERPQHLLMRVAVGIHGND 204
Query: 183 IDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIIS 242
I+ AI+TYH+MSQ++FTHASPTLF+AGTP+ QL+SCFLV MK+DSIEGIYDTLK CA+IS
Sbjct: 205 IEKAIETYHLMSQKYFTHASPTLFSAGTPQPQLASCFLVDMKEDSIEGIYDTLKTCAMIS 264
Query: 243 KSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLE 302
K+AGGIG++VH IR+TGSYI GTNGTSNG+VPMLRVFN+TARYVDQGG KR GAFA+YLE
Sbjct: 265 KNAGGIGLNVHRIRSTGSYIGGTNGTSNGLVPMLRVFNNTARYVDQGGNKRPGAFAIYLE 324
Query: 303 PWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADC 362
PWH+D+FEFLDLRKNHGKEE RARDLFYALW PDLFM+RV++NG W+LFCPNEAPGLAD
Sbjct: 325 PWHSDVFEFLDLRKNHGKEEVRARDLFYALWTPDLFMKRVEANGDWTLFCPNEAPGLADV 384
Query: 363 WGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGT 422
+G EF+ LY KYEKEG+ ++ V+AQ LW+ IL++Q ETG P+ML+KD CN+KSNQ+NLGT
Sbjct: 385 YGDEFDALYEKYEKEGRGRRTVKAQKLWYAILEAQTETGNPFMLYKDACNRKSNQKNLGT 444
Query: 423 IKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDF 482
I+SSNLCTE+++Y++P E AVCNLAS+ALP +V +RG +DF
Sbjct: 445 IRSSNLCTEIVEYSAPDEVAVCNLASLALPTFVD--------------ATRGE----YDF 486
Query: 483 EKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTE 542
KL EV ++ NLNKIID+NYYPV AR+SN+RHRPI +GV GLAD F+ L +PFDS E
Sbjct: 487 GKLHEVVQVLVRNLNKIIDINYYPVPEARKSNMRHRPIALGVNGLADAFLALRLPFDSPE 546
Query: 543 AQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGG 602
A+QLN IFETIY+ AL SS++A GPYETY GSPVS+GILQ DMW P+D WDW
Sbjct: 547 AKQLNIQIFETIYHGALTASSDLAKELGPYETYEGSPVSQGILQYDMWDRTPTDLWDWDA 606
Query: 603 LRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLH 662
L+ I++ GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN LL
Sbjct: 607 LKAKIAQTGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWLLK 666
Query: 663 DLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYID 722
DL ++GLWS +KN+II + GSVQ IP IP ++KA+YKTVWEI Q+T++ MA DRG +ID
Sbjct: 667 DLVDLGLWSDNMKNRIIAEGGSVQNIPNIPADIKALYKTVWEISQRTILQMAADRGAFID 726
Query: 723 HSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKV 782
SQSLNIH+ +P GK+TS+HF W GLKTGMYYLR+ AA+ I+FTVD +E KV
Sbjct: 727 QSQSLNIHLKEPTMGKITSMHFAGWKMGLKTGMYYLRTMAASAPIQFTVD----QEQLKV 782
Query: 783 TDDDDAKMA 791
D + A+++
Sbjct: 783 ADTNVARVS 791
>gi|328864042|gb|EGG13141.1| hypothetical protein MELLADRAFT_41450 [Melampsora larici-populina
98AG31]
Length = 871
Score = 1107 bits (2864), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/777 (65%), Positives = 628/777 (80%), Gaps = 20/777 (2%)
Query: 2 YVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAA 61
+V KRDG++E V FDKITAR+ KL YGL H +P+ +++KV GV+ GVTT +LD LAA
Sbjct: 3 FVYKRDGRRERVAFDKITARINKLCYGLDNVHVEPIEITKKVINGVFNGVTTVELDNLAA 62
Query: 62 ETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVY 121
ETAA MTT HPDYA LAARI +SNLHK TKK FS+ I+D+Y + N ++G +P+I+D+ Y
Sbjct: 63 ETAAYMTTRHPDYAVLAARIAISNLHKETKKLFSQVIEDLYRYVNPKNGRPSPMISDETY 122
Query: 122 DIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKD 181
+ + NA L+S +IYDRDF+Y+YFGFKTLERSYLL++ KV ERPQHMLMRVAVGIH
Sbjct: 123 EAVQANAEALNSAVIYDRDFNYNYFGFKTLERSYLLRIDNKVAERPQHMLMRVAVGIHGT 182
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAII 241
D+D AI+TY++MS+++FTHASPTLFN+GTP QLSSCFLV MK DSI+GIYDTLK CA+I
Sbjct: 183 DVDRAIRTYNLMSEKYFTHASPTLFNSGTPHPQLSSCFLVSMKSDSIDGIYDTLKTCAMI 242
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SK+AGGIG+++H+IRATGSYI GTNG SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y+
Sbjct: 243 SKTAGGIGLNIHDIRATGSYIAGTNGYSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIYI 302
Query: 302 EPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLAD 361
EPWHAD+F++LDLRKNHGKEE RARDLFYALW+PDLFM+RV+ NG W LFCP EAPGL+D
Sbjct: 303 EPWHADVFDWLDLRKNHGKEESRARDLFYALWIPDLFMQRVEDNGDWPLFCPAEAPGLSD 362
Query: 362 CWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG 421
+G FE+L+ +YEKEG+AKK V+AQ LW+ IL++Q ETG P+ML+KD N+KSNQ+NLG
Sbjct: 363 VYGEAFEKLFDQYEKEGRAKKTVKAQKLWYAILEAQTETGNPFMLYKDAANRKSNQKNLG 422
Query: 422 TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFD 481
TIKSSNLCTE+I+Y++P E AVCNLASIALP Y+ + GV +D
Sbjct: 423 TIKSSNLCTEIIEYSAPDEVAVCNLASIALPTYITD-GV-------------------YD 462
Query: 482 FEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDST 541
F+KL EVT VT NLN+IIDVNYYPV A++SN+RHRPIGIGV GLAD F +L +PFDS
Sbjct: 463 FQKLHEVTKEVTWNLNRIIDVNYYPVPEAKKSNMRHRPIGIGVNGLADAFQILKLPFDSP 522
Query: 542 EAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWG 601
EA++LN IFET+Y+ AL S+E+A EG YET+ GSP S G LQ DMWGV PSD W W
Sbjct: 523 EAKKLNAQIFETLYHAALEASNELAVAEGAYETFPGSPASLGELQYDMWGVTPSDLWKWD 582
Query: 602 GLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
L++ I G+RNSLL+APMPTASTSQI+G NECFEPYTSNIY+RRVL+GEF +VN LL
Sbjct: 583 DLKERIKATGLRNSLLLAPMPTASTSQIMGFNECFEPYTSNIYTRRVLAGEFQIVNPWLL 642
Query: 662 HDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYI 721
+L EMGLW+ +KN+II GS+Q IP IP ++KA+YKTVWEI QK ++D+A DRG +I
Sbjct: 643 KELVEMGLWNDEMKNRIIAHQGSIQNIPDIPTKMKAVYKTVWEISQKVIIDLAADRGAFI 702
Query: 722 DHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE 778
D SQSLNIH+ P FG+LTS+HF+AW +GLKTGMYYLR+RAAA+AI+FTVD + E
Sbjct: 703 DQSQSLNIHLQAPTFGQLTSMHFYAWKKGLKTGMYYLRTRAAANAIQFTVDKKLQDE 759
>gi|431919136|gb|ELK17888.1| Ribonucleoside-diphosphate reductase large subunit [Pteropus
alecto]
Length = 799
Score = 1107 bits (2863), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/804 (65%), Positives = 647/804 (80%), Gaps = 21/804 (2%)
Query: 7 DGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAA 66
+G+QE V FDKIT+R++KL YGL+++ DP ++ KV G+Y GVTT +LD LAAETAA
Sbjct: 15 NGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLAAETAAT 74
Query: 67 MTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMK 126
+TT HPDYA LAAR+ VSNLHK TKK FS+ ++D+YN+ N + +P++A DI++
Sbjct: 75 LTTKHPDYAILAARVAVSNLHKETKKVFSDVMEDLYNYINPHNSKHSPMVAKSTLDIVLA 134
Query: 127 NAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSA 186
N RL+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRV+VGIH++DI++A
Sbjct: 135 NKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHEEDIEAA 194
Query: 187 IKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAG 246
I+TY+++S+RWFTHASPTLFNAGT R QLSSCFL+ MKDDSIEGIYDTLK+CA+ISKSAG
Sbjct: 195 IETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCALISKSAG 254
Query: 247 GIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHA 306
GIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+YLEPWH
Sbjct: 255 GIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIYLEPWHL 314
Query: 307 DIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTE 366
DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV++N WSL CPNE PGL + WG E
Sbjct: 315 DIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQEWSLMCPNECPGLDEVWGEE 374
Query: 367 FERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSS 426
FE+LY YEK+G+ +KVV+AQ LW+ I++SQ ETGTPYML+KD+CN++SNQQNLGTIK S
Sbjct: 375 FEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRQSNQQNLGTIKCS 434
Query: 427 NLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLA 486
NLCTE+++YTS E AVCNLAS+AL YV + +DF+KLA
Sbjct: 435 NLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TPEHTYDFKKLA 475
Query: 487 EVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQL 546
EVT ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FIL+ PF+S EAQ L
Sbjct: 476 EVTKVIVRNLNKIIDINYYPIPEAYLSNKRHRPIGIGVQGLADAFILMRYPFESPEAQLL 535
Query: 547 NKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDM 606
NK IFETIYY AL S ++A GPYETY GSPVSKGILQ DMW V P+D WDW L++
Sbjct: 536 NKQIFETIYYGALEASCDLAKEHGPYETYKGSPVSKGILQYDMWNVTPTDLWDWKLLKEK 595
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HLL DLTE
Sbjct: 596 IAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHLLKDLTE 655
Query: 667 MGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQS 726
GLW+ +KN+II +GS+Q IP+IP++LK +YKTVWEI QKT++ MAV+RG +ID SQS
Sbjct: 656 RGLWNEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAVERGAFIDQSQS 715
Query: 727 LNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDD 786
LNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR+R AA+ I+FT++ LK+ K + ++
Sbjct: 716 LNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKEKASKEE 775
Query: 787 DA--KMAQMVCSLTNREECMACGS 808
+ A MVCSL NR+EC+ CGS
Sbjct: 776 EKERNTAAMVCSLENRDECLMCGS 799
>gi|46121591|ref|XP_385350.1| hypothetical protein FG05174.1 [Gibberella zeae PH-1]
Length = 913
Score = 1107 bits (2862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/808 (64%), Positives = 631/808 (78%), Gaps = 40/808 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDEL- 59
M+V KRDG+QE V FDKITAR+ +L YGL + H DPV ++QKV +GVY GVTT QLD+L
Sbjct: 1 MFVRKRDGRQERVQFDKITARVSRLCYGLDMNHVDPVAITQKVISGVYGGVTTIQLDDLV 60
Query: 60 -----------------AAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMY 102
AAETAA MT HPDYA LAARI VSNLHK TKK +S + D+Y
Sbjct: 61 SGVCTMTVVTSANPILQAAETAAYMTVTHPDYAILAARIAVSNLHKQTKKQWSAVVSDLY 120
Query: 103 NHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGK 162
+ N ++ +P+I+ + Y+ +M++ LDS I+YDRDF+Y+YFGF+TL RSYLL++ GK
Sbjct: 121 HWVNPKNDRASPMISKETYECVMRHKEELDSAIVYDRDFNYNYFGFRTLSRSYLLQIDGK 180
Query: 163 VVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVC 222
+ ERPQHM+MRVAVGI DDI+ ++TY++MS ++FTHASPTLFNAGTP+ QLSSCFLV
Sbjct: 181 IAERPQHMIMRVAVGIWGDDIERVLETYNLMSSKFFTHASPTLFNAGTPQPQLSSCFLVD 240
Query: 223 MKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDT 282
MK+DSI+GIYDTLK CA+ISK AGGIG++ H IRATGSYI GTNGTSNGIVPMLRVFN+T
Sbjct: 241 MKEDSIDGIYDTLKTCAMISKMAGGIGLNAHRIRATGSYIAGTNGTSNGIVPMLRVFNNT 300
Query: 283 ARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERV 342
ARYVDQGG KR GAFA+YLEPWHAD+FEFLDLRKNHGKEE RARDLF ALW+PDLFM+RV
Sbjct: 301 ARYVDQGGNKRPGAFAIYLEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRV 360
Query: 343 QSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGT 402
+ NG W+L CPNE PGLADC+G EFE LY KYE+EGK +K ++AQ LW+ IL++Q ETG
Sbjct: 361 ERNGEWTLMCPNECPGLADCYGDEFEALYEKYEREGKGRKSIKAQKLWYAILEAQTETGN 420
Query: 403 PYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPM 462
P+ML+KD CN+KSNQ+NLGTI+SSNLCTE+I+Y +P E AVCNLAS++LP ++
Sbjct: 421 PFMLYKDHCNRKSNQKNLGTIRSSNLCTEIIEYCAPDEVAVCNLASLSLPSFI------- 473
Query: 463 ESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGI 522
++ +DF+KL EVT +V NLNKIIDVN+YPV+ AR SN+RHRPIG+
Sbjct: 474 -----------NYEDACYDFKKLHEVTQVVVRNLNKIIDVNHYPVQEARNSNMRHRPIGL 522
Query: 523 GVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSK 582
GVQGLAD F+ L MPF+S EA++LNK IFETIY+ AL TS ++A EGPY T+ GSP S+
Sbjct: 523 GVQGLADAFLALRMPFESPEARELNKQIFETIYHAALTTSVQLAKEEGPYSTFKGSPASE 582
Query: 583 GILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSN 642
GILQ DMW V PSD WDW LR+ + +G+RNSLLVAPMPTASTSQILGNNECFEPYTSN
Sbjct: 583 GILQFDMWNVKPSDLWDWEPLREDVKTHGIRNSLLVAPMPTASTSQILGNNECFEPYTSN 642
Query: 643 IYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTV 702
IY RRVL+GEF VVN LL DL +MGLWS +KN+II D+GS+Q IP IP E+KA+YKTV
Sbjct: 643 IYQRRVLAGEFQVVNPWLLKDLVDMGLWSDAMKNRIIADNGSIQNIPNIPAEIKALYKTV 702
Query: 703 WEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRA 762
WEI Q+ +V MA DRG +ID SQSLNIHM P GK+TS+HF W GLKTGMYYLR++A
Sbjct: 703 WEISQRQVVQMAADRGAFIDQSQSLNIHMKDPTMGKITSMHFAGWKLGLKTGMYYLRTQA 762
Query: 763 AADAIKFTVDTSVLKENPKVTDDDDAKM 790
AA I+FTVD +EN K+ D + A +
Sbjct: 763 AAAPIQFTVD----QENLKIADSNSASI 786
>gi|453080262|gb|EMF08313.1| ribonucleoside-diphosphate reductase large chain [Mycosphaerella
populorum SO2202]
Length = 914
Score = 1107 bits (2862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/777 (65%), Positives = 626/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG++E V FDKITAR+ +L YGL EH D ++ KV GVY+GVTT QLD+LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDSTAITMKVINGVYQGVTTIQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA LAARI VSNLHK TKK FS + D+Y + N ++ +P+I+D
Sbjct: 61 AETAAYMTTTHPDYAILAARIAVSNLHKQTKKQFSAVVSDLYTYVNPKNNKPSPMISDYT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y ++M++A L+S I+YDRDF+Y YFGFKTLERSYLL++ GKV ERPQHM+MRVAVGIH
Sbjct: 121 YKVVMEHADELNSAIVYDRDFNYQYFGFKTLERSYLLRINGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDI++AI+TY+ MS ++FTHASPTLF+AGTP AQL+SCFL+ MKDDSIEGIYDTLK CA+
Sbjct: 181 DDIEAAIETYNYMSNKYFTHASPTLFSAGTPNAQLASCFLIDMKDDSIEGIYDTLKICAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++ H IRATGSYI GTNGTSNG++PMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKNAGGIGLNCHKIRATGSYIAGTNGTSNGLIPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+ F+DLRKNHGKEE RARDLF+ALW+PDLFM+RV+ N W+L CPNE PGLA
Sbjct: 301 LEPWHADVISFMDLRKNHGKEEVRARDLFFALWIPDLFMKRVEQNAEWTLMCPNECPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LYT+YEKEG+ ++ V+AQ +W+ IL++Q ETG P++L+KD N+KSNQ+NL
Sbjct: 361 DVYGDEFEELYTRYEKEGRGRETVRAQKVWYAILEAQTETGGPFILYKDAANRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I+YT+P E AVCNLAS+ALP YV +N F
Sbjct: 421 GTIKSSNLCTEIIEYTAPDEVAVCNLASLALPTYV------------------DLENEKF 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EV +VT+NLNKII+VN+YPV A++SN+RHRPIG+GV GLAD F+ L MPF+S
Sbjct: 463 DFQKLHEVVQVVTKNLNKIIEVNHYPVPEAKKSNMRHRPIGLGVSGLADAFLALRMPFES 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+QLN IFETIY+ AL S ++A + GPYETY GSPVSKG LQ DMWGV PSD WDW
Sbjct: 523 PEARQLNIQIFETIYHAALTASCDLAKKLGPYETYEGSPVSKGELQYDMWGVTPSDLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+++GVRNSLLVAPMPTASTSQI+G NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 DSLKAKIAEHGVRNSLLVAPMPTASTSQIMGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL + GLWS +KN+II D GS+Q+IP I ++LKA+YKTVWEI Q+ +V MA DRG +
Sbjct: 643 LKDLVDRGLWSENMKNRIIADGGSIQRIPNIGDDLKALYKTVWEISQRNIVQMAADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
ID SQSLNIH+ +P GK+TS+HF W GLKTGMYYLR++AA+ I+FTVD +LK
Sbjct: 703 IDQSQSLNIHLKEPTMGKITSMHFTGWKLGLKTGMYYLRTQAASAPIQFTVDQEMLK 759
>gi|391328008|ref|XP_003738485.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
isoform 1 [Metaseiulus occidentalis]
Length = 778
Score = 1107 bits (2862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/806 (65%), Positives = 635/806 (78%), Gaps = 30/806 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG++E VHFDKIT+R+ KL YGL+ E D ++QKV G+Y GVTT +LD+LA
Sbjct: 1 MHVLKRDGRKEPVHFDKITSRISKLCYGLNTEFVDATKITQKVIQGLYAGVTTKELDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA LAARI +SNLHK TKK FSETI + N ++G P+I+++
Sbjct: 61 AETAATMTTKHPDYAVLAARIAISNLHKETKKHFSETIHILRTMSNGKTGKPMPMISEET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+ +M N RLDS I+YDRDF+Y+YFGF+TLERSYLLK+ GK+VERPQHMLMRV+VGIH
Sbjct: 121 YNFVMANKDRLDSAIVYDRDFNYNYFGFRTLERSYLLKIDGKIVERPQHMLMRVSVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD+++AI+TY+ MS++WFTHASPTLFNAGT R QLSSCFL+ MKDDSIEGIY+TL +CA+
Sbjct: 181 DDVEAAIETYNFMSEKWFTHASPTLFNAGTCRPQLSSCFLLTMKDDSIEGIYETLSQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV++H IR TGSYI GTNGTSNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVNIHCIRPTGSYIAGTNGTSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIFEFLDLRKN G EE RARDLFYALW+PDLFM+RV+ NG WSL CPN PGL+
Sbjct: 301 LEPWHGDIFEFLDLRKNTGIEEMRARDLFYALWIPDLFMKRVEQNGKWSLMCPNTCPGLS 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG EFE+LY YEKEG+ + + AQ LW+ IL+SQIETGTPYML+KD CN+KSNQQNL
Sbjct: 361 DTWGDEFEKLYEGYEKEGRYIRQIDAQKLWYTILESQIETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++Y+SP E AVCNLAS+AL R+V + F
Sbjct: 421 GTIKCSNLCTEIVEYSSPDEIAVCNLASVALNRFVHDGA--------------------F 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DFE+L EVT +T NLNKIID+NYYPV A RSN RHRPIGIGVQGLAD FIL+ PFDS
Sbjct: 461 DFERLREVTKAITRNLNKIIDINYYPVPEAERSNKRHRPIGIGVQGLADAFILMRYPFDS 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA LN IFETIY+ AL S E+A G YETY G PVSKGILQ DMW V PSD WDW
Sbjct: 521 PEAMDLNSKIFETIYFAALEASCELAEIHGTYETYAGCPVSKGILQHDMWNVKPSDLWDW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
GLR I+++G+RNSLL+APMPTAST+QILGNNE EPYTSN+Y+RRVLSGEF +VN HL
Sbjct: 581 DGLRRKIAQHGIRNSLLLAPMPTASTAQILGNNESIEPYTSNVYARRVLSGEFQIVNHHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLT++GLW+ +KN+++ +GSVQ + IP++LK +Y+TVWE+ QK ++ MA DRG +
Sbjct: 641 LKDLTDLGLWNETMKNELVASNGSVQNL-DIPDKLKQLYRTVWELPQKNIIKMAADRGAF 699
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH + NFGKLTS+HF+ W GLKTGMYYLR++ AA AI+FTVD + +K+
Sbjct: 700 IDQSQSLNIHFAETNFGKLTSMHFYGWKLGLKTGMYYLRTKPAAQAIQFTVDKTKIKQK- 758
Query: 781 KVTDDDDAKMAQMVCSLTNREECMAC 806
MVCSLTN++ C++C
Sbjct: 759 --------NAEAMVCSLTNKDACLSC 776
>gi|391328010|ref|XP_003738486.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
isoform 2 [Metaseiulus occidentalis]
Length = 783
Score = 1107 bits (2862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 527/806 (65%), Positives = 634/806 (78%), Gaps = 30/806 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
+YV KRDG++E VHFDKIT+R+ KL YGL+ E D ++QKV G+Y GVTT +LD+LA
Sbjct: 6 LYVEKRDGRKEPVHFDKITSRISKLCYGLNTEFVDATKITQKVIQGLYAGVTTKELDDLA 65
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA LAARI +SNLHK TKK FSETI + N ++G P+I+++
Sbjct: 66 AETAATMTTKHPDYAVLAARIAISNLHKETKKHFSETIHILRTMSNGKTGKPMPMISEET 125
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+ +M N RLDS I+YDRDF+Y+YFGF+TLERSYLLK+ GK+VERPQHMLMRV+VGIH
Sbjct: 126 YNFVMANKDRLDSAIVYDRDFNYNYFGFRTLERSYLLKIDGKIVERPQHMLMRVSVGIHG 185
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD+++AI+TY+ MS++WFTHASPTLFNAGT R QLSSCFL+ MKDDSIEGIY+TL +CA+
Sbjct: 186 DDVEAAIETYNFMSEKWFTHASPTLFNAGTCRPQLSSCFLLTMKDDSIEGIYETLSQCAL 245
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV++H IR TGSYI GTNGTSNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 246 ISKSAGGIGVNIHCIRPTGSYIAGTNGTSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 305
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIFEFLDLRKN G EE RARDLFYALW+PDLFM+RV+ NG WSL CPN PGL+
Sbjct: 306 LEPWHGDIFEFLDLRKNTGIEEMRARDLFYALWIPDLFMKRVEQNGKWSLMCPNTCPGLS 365
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG EFE+LY YEKEG+ + + AQ LW+ IL+SQIETGTPYML+KD CN+KSNQQNL
Sbjct: 366 DTWGDEFEKLYEGYEKEGRYIRQIDAQKLWYTILESQIETGTPYMLYKDACNRKSNQQNL 425
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++Y+SP E AVCNLAS+AL R+V + F
Sbjct: 426 GTIKCSNLCTEIVEYSSPDEIAVCNLASVALNRFVHDGA--------------------F 465
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DFE+L EVT +T NLNKIID+NYYPV A RSN RHRPIGIGVQGLAD FIL+ PFDS
Sbjct: 466 DFERLREVTKAITRNLNKIIDINYYPVPEAERSNKRHRPIGIGVQGLADAFILMRYPFDS 525
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA LN IFETIY+ AL S E+A G YETY G PVSKGILQ DMW V PSD WDW
Sbjct: 526 PEAMDLNSKIFETIYFAALEASCELAEIHGTYETYAGCPVSKGILQHDMWNVKPSDLWDW 585
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
GLR I+++G+RNSLL+APMPTAST+QILGNNE EPYTSN+Y+RRVLSGEF +VN HL
Sbjct: 586 DGLRRKIAQHGIRNSLLLAPMPTASTAQILGNNESIEPYTSNVYARRVLSGEFQIVNHHL 645
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLT++GLW+ +KN+++ +GSVQ + IP++LK +Y+TVWE+ QK ++ MA DRG +
Sbjct: 646 LKDLTDLGLWNETMKNELVASNGSVQNL-DIPDKLKQLYRTVWELPQKNIIKMAADRGAF 704
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH + NFGKLTS+HF+ W GLKTGMYYLR++ AA AI+FTVD + +K+
Sbjct: 705 IDQSQSLNIHFAETNFGKLTSMHFYGWKLGLKTGMYYLRTKPAAQAIQFTVDKTKIKQK- 763
Query: 781 KVTDDDDAKMAQMVCSLTNREECMAC 806
MVCSLTN++ C++C
Sbjct: 764 --------NAEAMVCSLTNKDACLSC 781
>gi|325190738|emb|CCA25231.1| ribonucleosidediphosphate reductase large subunit p [Albugo
laibachii Nc14]
Length = 782
Score = 1107 bits (2862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/811 (63%), Positives = 639/811 (78%), Gaps = 32/811 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG++E V FDKITAR+ KL Y L+ E+ DPV +SQKV GVY GVTTS+LDELA
Sbjct: 1 MYVIKRDGRKEVVKFDKITARITKLCYNLNTEYVDPVQISQKVIAGVYPGVTTSELDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +T HPD++ LAARI +SNLHKNT K FSE I+ Y + ++ + + APLIA+DV
Sbjct: 61 AETAAYCSTQHPDFSKLAARIAISNLHKNTNKVFSENIQLFYENKHDTTKVPAPLIAEDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y +++KN L+S II DRDFDYDYFGFKTLE+SYLL+V GKV ERPQHM+MRVAVGIHK
Sbjct: 121 YRVVIKNKEALNSAIIGDRDFDYDYFGFKTLEKSYLLRVNGKVCERPQHMIMRVAVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+++++ ++TY MSQ++FTHA+PTLFNAGTPR QLSSCFL+ M+DDSI+GIYDTLK+CA
Sbjct: 181 ENLEAVLETYECMSQKFFTHATPTLFNAGTPRPQLSSCFLLSMQDDSIDGIYDTLKQCAC 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIGVS+ NIR T SYIRGTNG+SNGIVPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 241 ISKWAGGIGVSISNIRCTNSYIRGTNGSSNGIVPMLRVFNDTARYVDQGGGKRKGSFAMY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIFEFL+LRKNHG E HRARDLFYALW+PDLFM+RV+ N WSLFCPNEAP L
Sbjct: 301 LEPWHADIFEFLELRKNHGNELHRARDLFYALWIPDLFMKRVEDNQEWSLFCPNEAPRLY 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EF+ LY KYE A+K V+AQ LWF IL SQIETGTPYML+KD CN+KSNQQNL
Sbjct: 361 ETWGNEFDALYLKYESMNIARKTVKAQQLWFAILDSQIETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLC E+I+Y+ E AVCNLAS+AL ++V + + F
Sbjct: 421 GTIRSSNLCCEIIEYSDSKEVAVCNLASVALSKFVYQ--------------------KEF 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
F KL E+T IVT+NLNKIID+NYYP+ A+ SN RHRPIGIGVQGLADTF+L+G+PF+S
Sbjct: 461 QFTKLYEITKIVTKNLNKIIDINYYPIPEAQSSNQRHRPIGIGVQGLADTFLLMGLPFES 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP-SDRWD 599
A+ LNK+IFET+Y+ A+ S E+A GPYE+Y GSPVSKG Q DMW V P S RWD
Sbjct: 521 KAARDLNKEIFETMYFAAMEASMELARELGPYESYSGSPVSKGTFQFDMWQVTPDSGRWD 580
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L++ ++ +G+RNSLL+APMPTAST+QILGN E EP+TSN+++RRVL+GEF +VNK+
Sbjct: 581 WKSLKEQVAAHGIRNSLLLAPMPTASTAQILGNCESIEPFTSNMFNRRVLAGEFTIVNKY 640
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
L+ +L EM LW+ ++N+I+ D GSVQ I +IP +K YKTVWEIKQK+++DMA DRG
Sbjct: 641 LMEELIEMNLWTSDVRNQILRDRGSVQNIVEIPPNVKEKYKTVWEIKQKSILDMAADRGA 700
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN 779
YI SQSLNIH+ P KLTS+HF+AW +GLKTGMYYLR+R ADAI+FTVD L
Sbjct: 701 YICQSQSLNIHIADPTVSKLTSMHFYAWKKGLKTGMYYLRTRPRADAIQFTVDQKSL--- 757
Query: 780 PKVTDDDDAKMAQMVCS--LTNREECMACGS 808
DD+ +A++ + + EEC+ CG+
Sbjct: 758 ------DDSALAKLSQTQDVDEEEECLVCGA 782
>gi|116283230|gb|AAH03299.1| Rrm1 protein [Mus musculus]
Length = 762
Score = 1107 bits (2862), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/772 (67%), Positives = 630/772 (81%), Gaps = 19/772 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG+QE V FDKIT+R++KL YGL+++ DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT HPDYA LAARI VSNLHK TKK FS+ ++D+YN+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGRHSPMVASST 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI+M N RL+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRV+VGIHK
Sbjct: 121 LDIVMANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+AI+TY+++S++WFTHASPTLFNAGT R QLSSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV++N WSL CPNE PGL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE+LY YEK+G+ +KVV+AQ LW+ I++SQ ETGTPYML+KD+CN+KSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YTS E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TPEHTY 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DFEKLAEVT ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FIL+ PF+S
Sbjct: 462 DFEKLAEVTKVIVRNLNKIIDINYYPIPEAHLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S E+A GPYETY GSPVSKGILQ DMW V P+D WDW
Sbjct: 522 PEAQLLNKQIFETIYYGALEASCELAKEYGPYETYEGSPVSKGILQYDMWNVAPTDLWDW 581
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 KPLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE GLW+ +KN+II +GS+Q IP+IP++LK +YKTVWEI QKT++ MA +RG +
Sbjct: 642 LKDLTERGLWNEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 701
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR+R AA+ I+FT++
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLN 753
>gi|254565653|ref|XP_002489937.1| One of two large regulatory subunits of ribonucleotide-diphosphate
reductase [Komagataella pastoris GS115]
gi|238029733|emb|CAY67656.1| One of two large regulatory subunits of ribonucleotide-diphosphate
reductase [Komagataella pastoris GS115]
gi|328350349|emb|CCA36749.1| ribonucleoside-diphosphate reductase subunit M1 [Komagataella
pastoris CBS 7435]
Length = 867
Score = 1106 bits (2861), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/772 (65%), Positives = 622/772 (80%), Gaps = 16/772 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG +E V FDKITAR+ +L YGL +H D V ++Q+V +GVY GVTT +LD LA
Sbjct: 1 MYVFKRDGHKEPVRFDKITARVSRLCYGLDPKHVDAVAITQRVISGVYHGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA LAARI VSNLHK T K +S+ K++Y + N ++G +PL+++D
Sbjct: 61 AETAAYMTTIHPDYAILAARIAVSNLHKQTTKQYSQVTKELYEYINPKNGKHSPLVSEDT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+I+ K+A L+S I+YDRDF Y+YFGFKTLERSYLL++ G V ERPQH++MRVA+GIH
Sbjct: 121 YNIVQKHADELNSAIVYDRDFQYNYFGFKTLERSYLLRINGNVAERPQHLIMRVAIGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDI I+TY+ MSQ++FTHASPTLFNAGTP Q+SSCFLV M+DDSIEGIYDTLKECA+
Sbjct: 181 DDIARVIETYNFMSQKYFTHASPTLFNAGTPHPQMSSCFLVAMRDDSIEGIYDTLKECAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIRATGSYI GTNGTSNGI+PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRATGSYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF F+D+RKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF P+EAPGLA
Sbjct: 301 LEPWHADIFAFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNGDWTLFSPSEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LY +YEKEG+ ++ ++AQ LW+ IL++Q ETGTP+ML+KD CNKK+NQ+NL
Sbjct: 361 DVYGDEFEELYERYEKEGRGRQTIKAQKLWYAILEAQTETGTPFMLYKDACNKKTNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G IKSSNLC E+++Y+SP ETAVCNLASIALP +V + ++
Sbjct: 421 GVIKSSNLCCEIVEYSSPEETAVCNLASIALPAFVE----------------TDDTHCWY 464
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+FEKL E+T +VT NLN+IID N+YPV ARRSN+R+RPI +GVQGLAD F+ L +PFDS
Sbjct: 465 NFEKLHEITKVVTRNLNRIIDRNFYPVPEARRSNMRNRPIAVGVQGLADAFMKLRIPFDS 524
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+QLN IFETIY+ AL S+E+A EG YET+ GSP S+GILQ D+W PS+ W+W
Sbjct: 525 PEAKQLNIQIFETIYHAALEASNELAVEEGAYETFQGSPASQGILQYDLWDKKPSELWEW 584
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I G+RNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF +VN +L
Sbjct: 585 ESLKAKIVSTGLRNSLLVAPMPTASTSQILGYNECFEPYTSNIYSRRVLAGEFQIVNPYL 644
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++GLW +KN II D+GS+Q +P IPE+LK +YKTVWEI QKT++DMA DR Y
Sbjct: 645 LRDLVDLGLWDDNMKNHIISDNGSIQNLPNIPEQLKGLYKTVWEISQKTIIDMAADRSAY 704
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
ID SQSLNIH+ P GKLTS+HF+ W +GLKTGMYYLR++AAA AI+FTVD
Sbjct: 705 IDQSQSLNIHLMAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAAAAAIQFTVD 756
>gi|187608195|ref|NP_001120566.1| ribonucleotide reductase M1 [Xenopus (Silurana) tropicalis]
gi|171847253|gb|AAI61529.1| LOC100145720 protein [Xenopus (Silurana) tropicalis]
Length = 797
Score = 1106 bits (2861), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 531/816 (65%), Positives = 653/816 (80%), Gaps = 27/816 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG+QE V FDKIT+R++KL YGL++E DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNLEFVDPAQITMKVIQGLYNGVTTIELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT HPDYA LAARI VSNLHK TKK FS+ ++D+YN+ N +G +P+++ +
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKIFSDVMEDLYNYVNPLNGKHSPMVSKET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
D+++ N RL+S IIYDRDF Y++FGFKTLERSYLLK+ GKV ERPQHMLMRV+VGIHK
Sbjct: 121 LDLVLANKDRLNSSIIYDRDFSYNFFGFKTLERSYLLKIDGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DID+AI+TY+++S++WFTHASPTLFNAGT R QLSSCFL+CMKDDSIEGIYDTLK+CA+
Sbjct: 181 TDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLCMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH D+FEFLDL+KN GKEE RARDLFYA+W+PDLFM+RV++N WSL CP+E PGL
Sbjct: 301 LEPWHYDVFEFLDLKKNTGKEEQRARDLFYAMWIPDLFMKRVENNLDWSLMCPHECPGLE 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG +FE LY +YE+EG+A+KVV+AQ LW+ I++SQ ETGTPYML+KD CN+KSNQQNL
Sbjct: 361 EVWGDKFEELYERYEREGRARKVVKAQQLWYAIIESQTETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YTS E AVCNLAS+AL YV + R F
Sbjct: 421 GTIKCSNLCTEIVEYTSDDEVAVCNLASLALNMYV-------------------TPERSF 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLA+VT ++ NLNKII++N+YPV A SN RHRPIGIGVQGLAD FIL+ PF+S
Sbjct: 462 DFKKLADVTKVIVRNLNKIIEINFYPVPEAEYSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL +S E+A GPY+TY GSPVSKGILQ DMW V P+ WDW
Sbjct: 522 EEAQLLNKQIFETIYYAALESSCELAKELGPYDTYEGSPVSKGILQYDMWNVTPTGLWDW 581
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K GVRNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 AALKEKIAKYGVRNSLLLAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
+ DLTE GLW+ +KN+II ++GS+Q +P IP +LK +YKTVWEI QKT++ MA DRG +
Sbjct: 642 MKDLTERGLWNEEMKNQIIANNGSIQNVPDIPADLKELYKTVWEISQKTVITMAADRGAF 701
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +PN+GKLTS+HF W +GLKTGMYYLR+R AA+ I+FT++ LKE
Sbjct: 702 IDQSQSLNIHVAEPNYGKLTSMHFFGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKEKE 761
Query: 781 KVT--------DDDDAKMAQMVCSLTNREECMACGS 808
++ ++ + A MVCSL NR+EC+ CGS
Sbjct: 762 LISKETMEKDKEEKEKNKAAMVCSLENRDECLMCGS 797
>gi|194761754|ref|XP_001963091.1| GF14111 [Drosophila ananassae]
gi|190616788|gb|EDV32312.1| GF14111 [Drosophila ananassae]
Length = 812
Score = 1106 bits (2860), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/820 (62%), Positives = 646/820 (78%), Gaps = 31/820 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
+YV+KRDG+QE VHFDKIT+R++KL Y L+++ DPV ++ +V G+Y GVTT +LD LA
Sbjct: 12 LYVIKRDGRQEEVHFDKITSRIQKLCYNLNMDFVDPVTITLQVINGLYCGVTTQELDNLA 71
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE +A +T NH DYA LAARI VSNLHK T+K FS+ + +Y H N+ + L+APL+++
Sbjct: 72 AEISAGLTCNHADYAILAARIAVSNLHKETRKVFSDVFEALYTHVNKETNLRAPLVSEFH 131
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+++ KNA RL+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRVA+GIH
Sbjct: 132 YNVVKKNADRLNSSIIYDRDFGYNYFGFKTLERSYLLKINGKVAERPQHMLMRVAIGIHG 191
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+A++TY+++S+R+FTHASPTLF A T R QLSSCFL+ M DSIEGI+ ++++CA+
Sbjct: 192 EDIDAAVETYNLLSERYFTHASPTLFAAATNRPQLSSCFLLTMTADSIEGIFKSVEQCAM 251
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++VH IRA G+ I GTNGTSNG+VPMLRVFN+ ARYVDQGGGKR GAFA+Y
Sbjct: 252 ISKSAGGIGLNVHCIRAKGTSICGTNGTSNGLVPMLRVFNNVARYVDQGGGKRPGAFAIY 311
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+D+FEFLDL+KN GKEEHRARDLFYALW+PDLFM+RV++N WSL CP++ PGL
Sbjct: 312 LEPWHSDVFEFLDLKKNTGKEEHRARDLFYALWIPDLFMKRVEANEDWSLMCPHKCPGLH 371
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG EFE+LY KYE+EG+A + V+AQ+LWF I++SQ+ETG PYMLFKD CN+KSNQQN+
Sbjct: 372 DVWGDEFEKLYVKYEQEGRANRTVKAQSLWFAIIESQVETGNPYMLFKDACNRKSNQQNV 431
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++Y+SP E AVCNLASIAL +V + + +
Sbjct: 432 GTIKCSNLCTEIVEYSSPDEIAVCNLASIALNMFV-------------------TPEKTY 472
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EVT V NLNKIID+N+YP+ A++SN+RHRPIGIGVQGLAD IL+ P++S
Sbjct: 473 DFKKLKEVTKTVARNLNKIIDINFYPLPEAKKSNMRHRPIGIGVQGLADALILMRYPYES 532
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA LN+ IFETIY+ AL S E+A ++G YETY GSPVSKGILQ DMW P+ WDW
Sbjct: 533 EEASLLNQQIFETIYFGALEASCELAQKDGTYETYEGSPVSKGILQYDMWDKTPTGLWDW 592
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I ++GVRNSLLVAPMPTAST+QI+GNNE FEPYT+NIY+RRVLSGEF VVN HL
Sbjct: 593 KSLKESIKQHGVRNSLLVAPMPTASTAQIMGNNESFEPYTTNIYTRRVLSGEFQVVNHHL 652
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE+ LW +KN+II GS+Q I IP++++ +YKTVWEI K+ + MA DRG +
Sbjct: 653 LRDLTELDLWDDDMKNQIISSRGSIQNIESIPQKVRDLYKTVWEISVKSTIKMAADRGAF 712
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD--TSVLKE 778
ID SQS NIH+ +PN+GKLTS+HF++W GLKTGMYYLR++ AA+AI+FTVD S LK
Sbjct: 713 IDQSQSFNIHVAEPNYGKLTSIHFYSWKAGLKTGMYYLRTKPAANAIQFTVDKKMSALKI 772
Query: 779 NPK----------VTDDDDAKMAQMVCSLTNREECMACGS 808
N + D + KMA MVCSL N++ CM+CGS
Sbjct: 773 NGQNGVKEESAQDYESDRERKMADMVCSLENKDACMSCGS 812
>gi|393231310|gb|EJD38904.1| ribonucleotide reductase alpha subunit [Auricularia delicata
TFB-10046 SS5]
Length = 871
Score = 1105 bits (2858), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/777 (66%), Positives = 620/777 (79%), Gaps = 18/777 (2%)
Query: 2 YVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAA 61
+V KR +E V FDKITAR+ KL YGL EH DP+ +++KV GVY GVTT +LD LAA
Sbjct: 3 FVFKRGTPKERVAFDKITARVSKLCYGLDPEHVDPIEITKKVIDGVYAGVTTVELDNLAA 62
Query: 62 ETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVY 121
ETAA MTT HPDYA LAARI +SNLHK TKKSFS I+D YN+ N ++G A +I+++ Y
Sbjct: 63 ETAAYMTTKHPDYAILAARIAISNLHKETKKSFSHVIEDCYNYVNPKNGKPAGMISEETY 122
Query: 122 DIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKD 181
++ NA LDS IIYDRDF Y YFGFKTLERSYLL++ G+V ERPQHMLMRVAVGIH
Sbjct: 123 RVVKANAELLDSSIIYDRDFHYQYFGFKTLERSYLLRINGRVAERPQHMLMRVAVGIHGA 182
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAII 241
DI+ AI+TY++MS+R+FTHASPTLFNAGTP QLSSCFLV MK+DSIEGIYDTLK CA+I
Sbjct: 183 DIERAIETYNLMSERYFTHASPTLFNAGTPHPQLSSCFLVTMKEDSIEGIYDTLKTCAMI 242
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SK+AGGIG+++H IRA GSYI GTNG SNGIVPMLR ++ TARYVDQGG KR GAFA+Y+
Sbjct: 243 SKTAGGIGLNIHCIRAKGSYIAGTNGHSNGIVPMLRAYDSTARYVDQGGNKRPGAFAIYI 302
Query: 302 EPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLAD 361
EPWHAD+F+FLDLRKNHGKEE RARDLFYALW+PDLFM+RV+ NG WSLFCPNEAPGL +
Sbjct: 303 EPWHADVFDFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVEENGEWSLFCPNEAPGLHE 362
Query: 362 CWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG 421
EFE LY +YEKEG+A+K + AQ LW+ IL++QIETG P+ML+KD CN KSNQQNLG
Sbjct: 363 VHSAEFEALYERYEKEGRARKTIPAQKLWYAILEAQIETGGPFMLYKDACNAKSNQQNLG 422
Query: 422 TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFD 481
TIKSSNLCTE+++Y++P E AVCNLASIALP +V + + +D
Sbjct: 423 TIKSSNLCTEIVEYSAPDEVAVCNLASIALPSFV------------------AADKQSYD 464
Query: 482 FEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDST 541
F+KL +V +V NLNKIIDVNYYPV ARRSN+RHRPIGIGVQGLAD F++L +PFDS
Sbjct: 465 FQKLHDVAKVVARNLNKIIDVNYYPVPEARRSNMRHRPIGIGVQGLADAFMILRLPFDSA 524
Query: 542 EAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWG 601
EA++LN IFETIY+ AL SSE+AAR+GPYET+ GSP +G LQ D+WG P+D WDW
Sbjct: 525 EARKLNLQIFETIYHAALEASSELAARDGPYETWEGSPAQQGRLQYDLWGATPTDLWDWA 584
Query: 602 GLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
L++ I++ G+RNSLL+APMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VV LL
Sbjct: 585 ALKEQIAQTGLRNSLLLAPMPTASTSQILGFNECFEPYTSNIYTRRVLAGEFQVVCPWLL 644
Query: 662 HDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYI 721
+L + LW +KN II + GSVQ IP IP+++KAIYKTVWEI QK ++DMA DRG +I
Sbjct: 645 RELVDRRLWDDHMKNLIIANGGSVQNIPGIPDDVKAIYKTVWEISQKKVLDMAADRGAFI 704
Query: 722 DHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE 778
SQSLN+H+ P G+LTS+HF+ W +GLKTGMYYLR+R AA AI+FTVD +VLKE
Sbjct: 705 CQSQSLNVHLQSPTTGQLTSMHFYGWKKGLKTGMYYLRTRPAAQAIQFTVDAAVLKE 761
>gi|50426387|ref|XP_461790.1| DEHA2G05610p [Debaryomyces hansenii CBS767]
gi|49657460|emb|CAG90249.1| DEHA2G05610p [Debaryomyces hansenii CBS767]
Length = 867
Score = 1105 bits (2858), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/772 (65%), Positives = 625/772 (80%), Gaps = 16/772 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG++E V FDKITAR+++L YGL H +PV ++Q+V +GVY+GV T +LD LA
Sbjct: 1 MYVYKRDGRKEPVRFDKITARVQRLCYGLDTTHVEPVAITQRVISGVYQGVNTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA LAARI VSNLHK T K FS+ K++Y + N ++ L +P+I+ D
Sbjct: 61 AETAAYMTTIHPDYAILAARIAVSNLHKQTTKQFSQVSKELYEYVNPKTDLHSPMISKDT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YDII NA L+S I++DRDF+Y+YFGFKTLERSYLL++ GKV ERPQH++MRVAVGIH
Sbjct: 121 YDIIQANANELNSAIVFDRDFNYNYFGFKTLERSYLLRINGKVAERPQHLIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI+ I++Y+MMS R+FTH SPTLFNAGTP Q+SSCFLV MKDDSI+GIYDTLK CA+
Sbjct: 181 NDIERVIESYNMMSLRYFTHGSPTLFNAGTPSPQMSSCFLVAMKDDSIDGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+ +HNIR+TG+YI GTNGTSNGI+PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLHIHNIRSTGAYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+F+D+RKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF PNEA GL+
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNGDWTLFSPNEAKGLS 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LYTKYEKE + + VV+AQ LW+ IL +Q ETGTP+ML+KD CNKK+NQ+NL
Sbjct: 361 DVYGDEFEELYTKYEKENRGRSVVKAQKLWYAILDAQTETGTPFMLYKDACNKKTNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G IKSSNLC E+++Y++P E AVCNLASIALP +V + + ++
Sbjct: 421 GIIKSSNLCCEIVEYSAPDEVAVCNLASIALPAFV----------------DKNNTTSWY 464
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DFEKL EVT +VT NLN+IID NYYPV AR SN+R+RPI +GVQGLAD F+ L +PFDS
Sbjct: 465 DFEKLHEVTKVVTRNLNRIIDRNYYPVPEARNSNMRNRPIALGVQGLADAFMALRLPFDS 524
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LN IFETIY+ A+ S E+A EGPY+TY GSP SKGILQ D+W P++ WDW
Sbjct: 525 QEAKELNTQIFETIYHGAVEASIELAEIEGPYQTYEGSPASKGILQFDLWERKPTELWDW 584
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ ++K+G+RNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF +VN +L
Sbjct: 585 DTLKQKLAKHGIRNSLLVAPMPTASTSQILGYNECFEPYTSNIYSRRVLAGEFQIVNPYL 644
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W+ +KN II ++GS+Q +P IP+ELKA+YKTVWEI QK ++DMA DR +
Sbjct: 645 LRDLVDLGIWNDDMKNNIISNNGSIQTLPNIPDELKALYKTVWEISQKHIIDMAADRAAF 704
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
ID SQSLNIH+ P GKLTS+HF+ W +GLKTGMYYLR++AAA AI+FTVD
Sbjct: 705 IDQSQSLNIHIKDPTMGKLTSMHFYGWKKGLKTGMYYLRTQAAAAAIQFTVD 756
>gi|361127300|gb|EHK99273.1| putative Ribonucleoside-diphosphate reductase large chain [Glarea
lozoyensis 74030]
Length = 993
Score = 1105 bits (2857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/776 (65%), Positives = 619/776 (79%), Gaps = 18/776 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG++E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LA
Sbjct: 29 MYVWKRDGRKERVQFDKITARVSRLCYGLDTEHVDAAAITQKVISGVYQGVTTFELDNLA 88
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK FS I D+Y++ N R+ +P+I+ +
Sbjct: 89 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSSVISDLYHYTNPRNKKLSPMISKET 148
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+ +MK+ A L+S I+YDRDF+Y YFGFKTLERSYLL++ G+V ERPQHM+MRVAVGIH
Sbjct: 149 YETVMKHEAELNSAIVYDRDFNYQYFGFKTLERSYLLRLDGEVAERPQHMIMRVAVGIHG 208
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI++AI+TY++MS ++FTHASPTLF AGTP+AQLSSCFL+ MKDDSI+GIYDTLK CA+
Sbjct: 209 EDIEAAIETYNLMSSKFFTHASPTLFAAGTPQAQLSSCFLIDMKDDSIDGIYDTLKTCAM 268
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATG+YI GTNG SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 269 ISKNAGGIGLNVHRIRATGAYIAGTNGNSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 328
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+FE+LDLRKNHGKEE RARDLFYALW+PDLFM+RV+ NG W+L CPNE PGLA
Sbjct: 329 LEPWHADVFEYLDLRKNHGKEEVRARDLFYALWIPDLFMKRVEKNGDWTLMCPNECPGLA 388
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LY +YEKEG +K ++AQ LW+ IL++Q ETG P+ML+KD CN+KSNQ+NL
Sbjct: 389 DVYGDEFEALYERYEKEGMGRKTIKAQKLWYSILEAQTETGNPFMLYKDACNRKSNQKNL 448
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++Y+SP E A CNLAS+ALP +V N +
Sbjct: 449 GTIRSSNLCTEIVEYSSPDEVACCNLASMALPTFV------------------DINNGTY 490
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL +V +V +NLNKII+VNYYPV A++SN RHRPI +GVQGLAD F+ L +PF+S
Sbjct: 491 DFQKLHDVCQVVVKNLNKIIEVNYYPVPEAKKSNFRHRPIALGVQGLADVFLALRLPFES 550
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+ LN IFETIY+ AL S +A + G YETY GSPVSKG LQ DMWGV P+D WDW
Sbjct: 551 PEAKHLNIQIFETIYHAALTASCNLAKKLGTYETYEGSPVSKGELQYDMWGVTPTDLWDW 610
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I ++G+RNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 611 ASLKQEIKQHGIRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 670
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL +MGLWS +KN+II D GS+Q IP IP ++KA+YKTVWEI Q+T+V MA DRG +
Sbjct: 671 LKDLVDMGLWSDNMKNRIIADGGSIQNIPNIPADIKALYKTVWEISQRTIVQMAADRGAF 730
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
ID SQS+NIHM P GK+TS+HF W GLKTGMYYLR+ AA+ I+FTVD L
Sbjct: 731 IDQSQSMNIHMKDPTMGKITSMHFAGWKSGLKTGMYYLRTMAASAPIQFTVDQEAL 786
>gi|409078833|gb|EKM79195.1| hypothetical protein AGABI1DRAFT_58613 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 868
Score = 1105 bits (2857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/780 (66%), Positives = 626/780 (80%), Gaps = 20/780 (2%)
Query: 2 YVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAA 61
+V KR ++E V FDKIT+R++KL YGL + DPV V+QKV GVY+GVTT +LD LA+
Sbjct: 3 FVFKRGIRKERVQFDKITSRIEKLCYGLDTNYVDPVEVTQKVVQGVYQGVTTVELDNLAS 62
Query: 62 ETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVY 121
ETAA +TT HPDYA LAARI +SNLHK TKK+FS+ I D+Y++ N ++G A +I+ + Y
Sbjct: 63 ETAAYLTTKHPDYAVLAARIAISNLHKETKKTFSQVISDLYHYINPKNGKPAGMISKETY 122
Query: 122 DIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKD 181
D++MK+A L+S IIY RDF+Y+YFGFKTLERSYLL++ +V ERPQHM+MRVAVGIH +
Sbjct: 123 DVVMKHADTLNSAIIYTRDFNYNYFGFKTLERSYLLRINNRVAERPQHMIMRVAVGIHGE 182
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAII 241
DID ++TY++MS+R+FTHASPTLFNAGTP QLSSCFLVCMKDDSIEGIYDTLK CA+I
Sbjct: 183 DIDRVMETYNLMSERYFTHASPTLFNAGTPHPQLSSCFLVCMKDDSIEGIYDTLKSCAMI 242
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SK+AGGIG+++H IRATGSYI GTNG SNGIVPMLR ++ TARYVDQGG KR GAFA+YL
Sbjct: 243 SKTAGGIGLNIHCIRATGSYIAGTNGYSNGIVPMLRAYDATARYVDQGGNKRPGAFAIYL 302
Query: 302 EPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLAD 361
EPWHAD+F+FLDLRKNHGKEE RARDLFYALW+PDLFM+RV++NG WSLFCP+EAPGL +
Sbjct: 303 EPWHADVFDFLDLRKNHGKEEARARDLFYALWIPDLFMKRVEANGDWSLFCPSEAPGLHE 362
Query: 362 CWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG 421
WG EFE LY KYEKEG+ +K + AQ LW+ IL+SQIETG P+M++KD N KSNQ+NLG
Sbjct: 363 VWGPEFEALYEKYEKEGRQRKTMPAQKLWYAILESQIETGGPFMVYKDHANSKSNQKNLG 422
Query: 422 TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFD 481
TIKSSNLCTE+I+Y+SP ETAVCNLAS+ALP ++ N +D
Sbjct: 423 TIKSSNLCTEIIEYSSPDETAVCNLASLALPTFI--------------------NNGKYD 462
Query: 482 FEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDST 541
F+KL EV +V NLN+IIDVNYYP+ ARRSN+RHRPIGIGVQGLADTF+ L MPFDS
Sbjct: 463 FQKLHEVAKVVAFNLNRIIDVNYYPIPEARRSNMRHRPIGIGVQGLADTFMALRMPFDSP 522
Query: 542 EAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWG 601
EA+ LN IFETIY+ AL SSE+A EG YETY GSPVS+G LQ D+WG+ P+D WDW
Sbjct: 523 EAKLLNIQIFETIYHGALEASSEMAVSEGRYETYEGSPVSQGQLQYDLWGITPTDLWDWT 582
Query: 602 GLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
L+ I++ G+RNSLLV+PMPTASTSQILGNNECFEPYTSNIY+RRVL+GEF VV LL
Sbjct: 583 SLKQQIARTGIRNSLLVSPMPTASTSQILGNNECFEPYTSNIYTRRVLAGEFQVVCPWLL 642
Query: 662 HDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYI 721
+L + LW +KN II +GSVQ IP IP ++KAIYKTVWEI QK ++D+A DRG +I
Sbjct: 643 RELVGLDLWDDNMKNMIIAHNGSVQNIPNIPADVKAIYKTVWEISQKKVLDLAADRGPFI 702
Query: 722 DHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPK 781
SQSLN+H+ P G+LTS+HF+ W +GLKTGMYYLR+R AA AI+FTVD SVL + K
Sbjct: 703 CQSQSLNVHLQSPTLGQLTSMHFYGWKKGLKTGMYYLRTRPAAQAIQFTVDQSVLNQAKK 762
>gi|402223227|gb|EJU03292.1| ribonucleotide reductase alpha subunit [Dacryopinax sp. DJM-731
SS1]
Length = 916
Score = 1105 bits (2857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/800 (64%), Positives = 633/800 (79%), Gaps = 21/800 (2%)
Query: 2 YVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAA 61
YV KRD ++E V FDKITAR++KL YGL +H DP +++KV GVY GVTT +LD LA+
Sbjct: 3 YVFKRDRRKERVAFDKITARIQKLCYGLDQDHVDPFEITKKVIAGVYPGVTTVELDNLAS 62
Query: 62 ETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVY 121
ETAA +TT HPDYA LAARI +SNLHK TKK FS+ I+D+Y + N ++G +P+IA D+Y
Sbjct: 63 ETAAYLTTKHPDYAILAARIAISNLHKETKKLFSQVIEDLYTYVNPKNGRHSPMIAKDIY 122
Query: 122 DIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKD 181
DI+ +N LDS IIY+RDF + +FGFKTLERSYLL++ GKV ERPQ MLMRVA+GIH
Sbjct: 123 DIVQENKEVLDSAIIYERDFHHQFFGFKTLERSYLLRINGKVAERPQQMLMRVAIGIHGR 182
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAII 241
DID A+ TY +MS+R+FTHASPTLFNAGTP QLSSCFLV MKDDSIEGIYDTLK CA+I
Sbjct: 183 DIDRALATYTLMSERYFTHASPTLFNAGTPHPQLSSCFLVAMKDDSIEGIYDTLKTCAMI 242
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SK+AGGIG+ +HNIRA GSYI GTNG SNGIVPMLR ++ TARYVDQGG KR GAFA+Y+
Sbjct: 243 SKTAGGIGMHIHNIRAKGSYIAGTNGYSNGIVPMLRAYDATARYVDQGGNKRPGAFAIYI 302
Query: 302 EPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLAD 361
EPWHAD+FEFLDLRKNHGKEE RARDLFYALW+ DLFM+RV+S+G WSLFCPNEAPG+++
Sbjct: 303 EPWHADVFEFLDLRKNHGKEEVRARDLFYALWISDLFMKRVESDGDWSLFCPNEAPGMSE 362
Query: 362 CWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG 421
+FE LYT+YE+EG+A++ ++AQ LW+ IL +QIETG P+ML+KD N KSNQ+NLG
Sbjct: 363 VHSEDFEALYTRYEREGRARQTIKAQKLWYAILDAQIETGGPFMLYKDAANSKSNQKNLG 422
Query: 422 TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFD 481
TIKSSNLCTE+++Y++P E AVCNLASIALP ++ ++ +D
Sbjct: 423 TIKSSNLCTEIMEYSAPDEVAVCNLASIALPSFI--------------------QDGQYD 462
Query: 482 FEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDST 541
FEKL V +V NLN+IIDVNYYPV ARRSN+RHRPIG+GVQGLAD F+ L MPFDS
Sbjct: 463 FEKLHAVAKVVAFNLNRIIDVNYYPVPEARRSNMRHRPIGVGVQGLADAFMALRMPFDSP 522
Query: 542 EAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWG 601
EA+QLN+DIFETIY+ AL S+E+A +G YET+ GSP S+G LQ D+WGV PSDRWDW
Sbjct: 523 EARQLNRDIFETIYHAALEASNEMAETDGAYETFEGSPASRGELQFDLWGVMPSDRWDWA 582
Query: 602 GLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
GL++ IS+ G+RNSLL+APMPTASTSQILGNNECFEPYTS IY+RRVL+GEF VV LL
Sbjct: 583 GLKEKISRTGLRNSLLLAPMPTASTSQILGNNECFEPYTSMIYARRVLAGEFQVVCPWLL 642
Query: 662 HDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYI 721
DL ++GLW+ +++ II GS+Q IP IP+ +KAIYKTVWEI QK ++D+A DRG +I
Sbjct: 643 RDLVDLGLWNDQMRDMIIASGGSIQNIPGIPDNIKAIYKTVWEISQKKILDLAADRGAFI 702
Query: 722 DHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPK 781
SQSLN+H+ P G+LTS+HF+ W +GLKTGMYYLR+R AA AI+FT+D SV+K+
Sbjct: 703 CQSQSLNVHLQSPTLGQLTSMHFYGWKKGLKTGMYYLRTRPAAQAIQFTLDASVIKQAKD 762
Query: 782 VTDDDDAKMAQMVCSLTNRE 801
+ A AQ V ++ R+
Sbjct: 763 AQNGVSAP-AQAVRAMKPRQ 781
>gi|321471172|gb|EFX82145.1| hypothetical protein DAPPUDRAFT_302612 [Daphnia pulex]
Length = 798
Score = 1104 bits (2855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 530/817 (64%), Positives = 649/817 (79%), Gaps = 28/817 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR G+QE VHFDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVLKRGGRQEDVHFDKITSRIQKLCYGLNSDFVDPTAITMKVINGLYPGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA LAARI VSNLHK TKK FSE I D+YN N+ + P+I+D
Sbjct: 61 AETAATMTTKHPDYAILAARIAVSNLHKETKKVFSEVIDDLYNMKNKITKKPTPMISDFH 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+ II K++ +L+S IIYDRDF+++YFGFKTLE+SYLLK+ GK VERPQH++MRV+VGIH
Sbjct: 121 HGIITKHSDKLNSAIIYDRDFNFNYFGFKTLEKSYLLKIDGKPVERPQHLMMRVSVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+AI+TY+++S++WFTHASPTLF A TPR QLSSCFL+ MKDDSI+GIY+TLK+CAI
Sbjct: 181 EDIDAAIETYNLLSEKWFTHASPTLFYAATPRPQLSSCFLLTMKDDSIDGIYETLKQCAI 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++VH IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLNVHCIRATGSYIAGTNGISNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+D+F+FLDL+KN GKEE+RARDLFYALW+PDLFM RV+S+G WSL CP+E PGLA
Sbjct: 301 LEPWHSDVFDFLDLKKNTGKEENRARDLFYALWIPDLFMRRVESDGDWSLMCPHECPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG EFE LYTKYE+ G ++ V+AQ LWF +++SQIETGTPY+L+KD CN+KSNQQNL
Sbjct: 361 DTWGEEFEALYTKYEESGMYRRKVKAQQLWFAVIESQIETGTPYILYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++Y+SP E AVCNL SIAL +V+ ++ F
Sbjct: 421 GTIKCSNLCTEIVEYSSPEEVAVCNLGSIALNMFVK-------------------PDKTF 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D KL EVT ++T NLNKII++NYYPV A+RSN RHRPIGIGVQGLAD FIL+ PFDS
Sbjct: 462 DIPKLKEVTKVLTRNLNKIIEINYYPVPEAKRSNFRHRPIGIGVQGLADAFILMRYPFDS 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S E+A + G YE+Y G PVSKGILQ DMWGV P+D WDW
Sbjct: 522 EEAQLLNKHIFETIYYGALEASCELAEQLGTYESYPGCPVSKGILQYDMWGVTPTDLWDW 581
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+++G+RNSLL+APMPTAST+QILGNNE E YTSNIY RRVLSGEF VVN HL
Sbjct: 582 AALKKKINEHGLRNSLLLAPMPTASTAQILGNNESIEAYTSNIYVRRVLSGEFQVVNHHL 641
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE GLW+ +KN II ++GS+Q I IP++LKA+YKTVWEI Q+ ++ MA DRG +
Sbjct: 642 LRDLTEGGLWNEDVKNGIIANNGSIQNIDGIPDDLKALYKTVWEIPQRIVIKMAADRGAF 701
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +PN+GKLTS+HF++W GLKTGMYYLR++ AA AI+FTVD S LK+
Sbjct: 702 IDQSQSLNIHIAEPNYGKLTSMHFYSWKLGLKTGMYYLRTKPAASAIQFTVDKSKLKKMN 761
Query: 781 KV---------TDDDDAKMAQMVCSLTNREECMACGS 808
V D++ MVCSL NR++C+ CGS
Sbjct: 762 GVDNSAGATNGNDEEKRNREAMVCSLQNRDDCLMCGS 798
>gi|393186080|gb|AFN02837.1| putative ribonucleotide-diphosphate reductase large chain
[Phakopsora pachyrhizi]
Length = 865
Score = 1104 bits (2855), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/777 (65%), Positives = 628/777 (80%), Gaps = 20/777 (2%)
Query: 2 YVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAA 61
+V KRDG++E V FDKITAR+ KL YGL H +P+ +++KV GV+ GVTT +LD LAA
Sbjct: 3 FVYKRDGRRERVAFDKITARINKLCYGLDNVHVEPIEITKKVINGVFNGVTTVELDNLAA 62
Query: 62 ETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVY 121
ETAA MTT HPDYA LAARI +SNLHK TKK FS+ I+D+YN+ N +G + +I+ Y
Sbjct: 63 ETAAYMTTRHPDYAVLAARIAISNLHKETKKIFSQVIEDLYNYVNPINGRPSSMISQTTY 122
Query: 122 DIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKD 181
+ + NA L+S +IYDRDF+Y+YFGFKTLERSYLL++ GKV ERPQHMLMRVAVGIH
Sbjct: 123 EAVKANAEALNSAVIYDRDFNYNYFGFKTLERSYLLRINGKVAERPQHMLMRVAVGIHGT 182
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAII 241
D++ AI+TY++MS+++FTHASPTLFN+GTP Q+SSCFLV M DSI+GIYDTLK CA+I
Sbjct: 183 DVERAIRTYNLMSEKYFTHASPTLFNSGTPHPQMSSCFLVSMTSDSIDGIYDTLKTCAMI 242
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SKSAGGIG++VH+IRATGSYI GTNG SNGIVPMLRVFN+TARYVDQGG KR GAFA+YL
Sbjct: 243 SKSAGGIGLNVHDIRATGSYIAGTNGYSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIYL 302
Query: 302 EPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLAD 361
EPWHAD+F++LDLRKNHGKEE RARDLFYALW+PD+FM RV+ NG W L CP EAPGL+D
Sbjct: 303 EPWHADVFDWLDLRKNHGKEESRARDLFYALWIPDMFMRRVEQNGDWPLLCPAEAPGLSD 362
Query: 362 CWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG 421
+G EF+ L+ +YE+EG+AKKV++AQ LW+ IL++Q ETG P+ML+KD NKKSNQ+NLG
Sbjct: 363 VYGEEFDELFLRYEREGRAKKVIKAQKLWYAILEAQTETGNPFMLYKDAANKKSNQKNLG 422
Query: 422 TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFD 481
TIKSSNLCTE+I+Y++P E AVCNLASIALP Y+ + GV +D
Sbjct: 423 TIKSSNLCTEIIEYSAPDEVAVCNLASIALPTYIND-GV-------------------YD 462
Query: 482 FEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDST 541
F+KL EV VT NLNKIID+NYYPV AR+SN+RHRPIGIGVQGLAD F +L +PFDS
Sbjct: 463 FKKLHEVVKEVTYNLNKIIDINYYPVPEARKSNMRHRPIGIGVQGLADAFQILKLPFDSD 522
Query: 542 EAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWG 601
+A++LN IFET+Y+ AL S E+A +EG YET+ GSP S G Q D+WGV P+D W+WG
Sbjct: 523 KAKKLNIQIFETLYHAALEASHELALKEGHYETFPGSPASNGEFQYDLWGVTPTDLWEWG 582
Query: 602 GLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
L++ + K+G+RNSLL+APMPTASTSQILG NECFEPYTSNIY+RRVL+GEF +VN LL
Sbjct: 583 TLKEKVKKDGIRNSLLLAPMPTASTSQILGFNECFEPYTSNIYTRRVLAGEFQIVNPWLL 642
Query: 662 HDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYI 721
+L EMGLW+ +KN+II GS+Q IP IP ++KA+YKTVWEI QK+++DM+ DRG +I
Sbjct: 643 KELVEMGLWNDEMKNRIIAHQGSIQNIPNIPSQMKAVYKTVWEISQKSIIDMSADRGAFI 702
Query: 722 DHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE 778
D SQSLNIH+ P FG+LTS+HF+AW +GLKTGMYYLR+RAAA+AI+FTVD + E
Sbjct: 703 DQSQSLNIHLQAPTFGQLTSMHFYAWKKGLKTGMYYLRTRAAANAIQFTVDKKIQDE 759
>gi|393186086|gb|AFN02840.1| putative ribonucleoside-diphosphate reductase large chain
[Phakopsora pachyrhizi]
Length = 865
Score = 1103 bits (2854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/777 (65%), Positives = 628/777 (80%), Gaps = 20/777 (2%)
Query: 2 YVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAA 61
+V KRDG++E V FDKITAR+ KL YGL H +P+ +++KV GV+ GVTT +LD LAA
Sbjct: 3 FVYKRDGRRERVAFDKITARINKLCYGLDNVHVEPIEITKKVINGVFNGVTTVELDNLAA 62
Query: 62 ETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVY 121
ETAA MTT HPDYA LAARI +SNLHK TKK FS+ I+D+YN+ N +G + +I+ Y
Sbjct: 63 ETAAYMTTRHPDYAVLAARIAISNLHKETKKIFSQVIEDLYNYVNPINGRPSSMISQTTY 122
Query: 122 DIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKD 181
+ + NA L+S +IYDRDF+Y+YFGFKTLERSYLL++ GKV ERPQHMLMRVAVGIH
Sbjct: 123 EAVKANAEALNSAVIYDRDFNYNYFGFKTLERSYLLRINGKVAERPQHMLMRVAVGIHGT 182
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAII 241
D++ AI+TY++MS+++FTHASPTLFN+GTP Q+SSCFLV M DSI+GIYDTLK CA+I
Sbjct: 183 DVERAIRTYNLMSEKYFTHASPTLFNSGTPHPQMSSCFLVSMTSDSIDGIYDTLKTCAMI 242
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SKSAGGIG++VH+IRATGSYI GTNG SNGIVPMLRVFN+TARYVDQGG KR GAFA+YL
Sbjct: 243 SKSAGGIGLNVHDIRATGSYIAGTNGYSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIYL 302
Query: 302 EPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLAD 361
EPWHAD+F++LDLRKNHGKEE RARDLFYALW+PD+FM RV+ NG W L CP EAPGL+D
Sbjct: 303 EPWHADVFDWLDLRKNHGKEESRARDLFYALWIPDMFMRRVEQNGDWPLLCPAEAPGLSD 362
Query: 362 CWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG 421
+G EF+ L+ +YE+EG+AKKV++AQ LW+ IL++Q ETG P+ML+KD NKKSNQ+NLG
Sbjct: 363 VYGEEFDELFLRYEREGRAKKVIKAQKLWYAILEAQTETGNPFMLYKDAANKKSNQKNLG 422
Query: 422 TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFD 481
TIKSSNLCTE+I+Y++P E AVCNLASIALP Y+ + GV +D
Sbjct: 423 TIKSSNLCTEIIEYSAPDEVAVCNLASIALPTYIND-GV-------------------YD 462
Query: 482 FEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDST 541
F+KL EV VT NLNKIID+NYYPV AR+SN+RHRPIGIGVQGLAD F +L +PFDS
Sbjct: 463 FKKLHEVVKEVTYNLNKIIDINYYPVPEARKSNMRHRPIGIGVQGLADAFQILKLPFDSD 522
Query: 542 EAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWG 601
+A++LN IFET+Y+ AL S E+A +EG YET+ GSP S G Q D+WGV P+D W+WG
Sbjct: 523 KAKKLNIQIFETLYHAALEASHELALKEGHYETFPGSPASNGEFQYDLWGVTPTDLWEWG 582
Query: 602 GLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
L++ + K+G+RNSLL+APMPTASTSQILG NECFEPYTSNIY+RRVL+GEF +VN LL
Sbjct: 583 TLKEKVKKDGIRNSLLLAPMPTASTSQILGFNECFEPYTSNIYTRRVLAGEFQIVNPWLL 642
Query: 662 HDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYI 721
+L EMGLW+ +KN+II GS+Q IP IP ++KA+YKTVWEI QK+++DM+ DRG +I
Sbjct: 643 KELVEMGLWNDEMKNRIIAHQGSIQNIPNIPSQMKAVYKTVWEISQKSIIDMSADRGAFI 702
Query: 722 DHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE 778
D SQSLNIH+ P FG+LTS+HF+AW +GLKTGMYYLR+RAAA+AI+FTVD + E
Sbjct: 703 DQSQSLNIHLQAPTFGQLTSMHFYAWKKGLKTGMYYLRTRAAANAIQFTVDKKIQDE 759
>gi|223999029|ref|XP_002289187.1| ribonucleotide reductase large chain subunit [Thalassiosira
pseudonana CCMP1335]
gi|220974395|gb|EED92724.1| ribonucleotide reductase large chain subunit [Thalassiosira
pseudonana CCMP1335]
Length = 813
Score = 1103 bits (2854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/826 (60%), Positives = 643/826 (77%), Gaps = 31/826 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDGK+++ FDKI +R+ KL YGL + + ++SQKV GVY GVTT++LDELA
Sbjct: 1 MYVVKRDGKKQSCQFDKIQSRISKLCYGLDQKFVNEAVISQKVIQGVYPGVTTTELDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
A+TAA+ +T HPDYA LAARI VSNLHK T+K FS+ ++ YN+ + ++G APL++ +V
Sbjct: 61 AQTAASFSTQHPDYAVLAARIEVSNLHKETEKQFSKVVEAFYNYTHPKTGEPAPLVSKEV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YD++ N LD +I+DRDF++DYFG+KTLE+SYLLK+ G++ ERPQHMLMRV+VGIH
Sbjct: 121 YDVVNANKDVLDGAVIHDRDFEFDYFGYKTLEKSYLLKLHGEIAERPQHMLMRVSVGIHM 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI+ ++TY+++SQR+FTHA+PTLFNAGTP Q+SSCFL C+K DSI+GIYDTLK CA+
Sbjct: 181 GDIERVLETYNLLSQRFFTHATPTLFNAGTPNPQMSSCFLTCIKADSIDGIYDTLKNCAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ N+RA+ SYIRGTNGTSNGIVPMLRVFN+TARYVDQGGGKRKG+ A Y
Sbjct: 241 ISKYAGGIGMSISNVRASASYIRGTNGTSNGIVPMLRVFNNTARYVDQGGGKRKGSIAAY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWHADIF FLDLRKNHG E RARDLFYALW+PDLFM+RV+ NG W+L CPNE PGL
Sbjct: 301 IEPWHADIFAFLDLRKNHGNEMERARDLFYALWIPDLFMQRVEQNGDWTLMCPNECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
CWG EF+ LY KYE+EGK +K ++AQ LWF +L SQ+ETGTPYML+KD+CN+KSNQQNL
Sbjct: 361 TCWGEEFKTLYEKYEREGKGRKTIKAQQLWFAVLDSQVETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YT+P E AVCNLASI+L ++V P+ G G +F
Sbjct: 421 GTIKCSNLCTEIVEYTAPDEIAVCNLASISLSKFVT---------PADNFGGEG----HF 467
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D E L ++ +VT+NLN++ID N+YPVE ARRSN+RHRPIGIGVQGLAD F+++ +PF+S
Sbjct: 468 DLENLKHISKVVTKNLNRVIDRNFYPVEEARRSNMRHRPIGIGVQGLADAFMMMKLPFES 527
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+QLNKDIFETIY+ A S E+A +EGPYETY GSP SKG LQ DMWGV PS+ WDW
Sbjct: 528 PEARQLNKDIFETIYFGACEASMELAEQEGPYETYEGSPASKGQLQFDMWGVEPSNLWDW 587
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
GL+ I+++G+RNSLL+APMPTAST+QILGNNE EP+TSN+Y+RRVL+GEF +VNKHL
Sbjct: 588 AGLKAKIAQHGMRNSLLMAPMPTASTAQILGNNESTEPFTSNMYNRRVLAGEFTIVNKHL 647
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L +LT GLW+ ++N+II GSVQ + IP+ ++ +YKTVWEI Q+ ++DMA DRG +
Sbjct: 648 LRELTANGLWTERVRNQIIAQGGSVQAVADIPKSIRDVYKTVWEIPQRAILDMAADRGAF 707
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
I SQS+N+H+ +P+ KLTS+HF+AW +GLKTGMYYLR+R ADAI+FTV+ +L E+
Sbjct: 708 ICQSQSMNVHIGEPSTSKLTSMHFYAWKKGLKTGMYYLRTRPKADAIQFTVNQEMLAEST 767
Query: 781 KVTDDDDAKMAQMVCSLT------------------NREECMACGS 808
D + S+T EEC+ CG+
Sbjct: 768 SKPAQDQLERNPSPTSVTAAGKVSVNSKFAGLQMKDEEEECLNCGA 813
>gi|219110871|ref|XP_002177187.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411722|gb|EEC51650.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 814
Score = 1103 bits (2854), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/826 (62%), Positives = 651/826 (78%), Gaps = 32/826 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KR+G++E+VHFDKIT+R+ KL YGL +H DPV++SQKV GVY GVTTS+LDELA
Sbjct: 3 MYVLKRNGRRESVHFDKITSRVSKLCYGLDAKHVDPVIISQKVIQGVYPGVTTSELDELA 62
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
A+TAA+ T HPDY+ LAAR+ VSNLHK T FS+ ++ YN+ + ++G A LI+++V
Sbjct: 63 AQTAASFATQHPDYSILAARVSVSNLHKMTIARFSDLVEVFYNYKHPKTGEPASLISEEV 122
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y I+ K+ LD I++ RDF+YDYFGFKTLE+SYLLKV GK+ ERPQ MLMRV+VGIH
Sbjct: 123 YQIVQKHKDELDGAIVHARDFEYDYFGFKTLEKSYLLKVDGKIAERPQLMLMRVSVGIHG 182
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDI I+TY+ +S+R+FTHA+PTLFNAGT Q+SSCFL+ MK+DSI+GIYDTLK CA+
Sbjct: 183 DDIPRVIETYNFLSERYFTHATPTLFNAGTNMPQMSSCFLMTMKEDSIDGIYDTLKNCAV 242
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+++HN+RA+ SYIRGTNG+SNGIVPMLRVFN+TARYVDQGGGKRKG+ A+Y
Sbjct: 243 ISKYAGGIGLAIHNVRASQSYIRGTNGSSNGIVPMLRVFNNTARYVDQGGGKRKGSIAIY 302
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+F FLDLRKNHG E RARDLF+A+WVPDLFM+RV+ NG WSL CPNE PGLA
Sbjct: 303 LEPWHADVFAFLDLRKNHGNESDRARDLFFAMWVPDLFMKRVKDNGTWSLLCPNECPGLA 362
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EFE LY +YE+EGK ++ ++AQ LWF IL SQ+ETGTPYMLFKD CN+KSNQQNL
Sbjct: 363 DCFGDEFEALYERYEREGKVRQTIKAQQLWFAILDSQVETGTPYMLFKDHCNRKSNQQNL 422
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YT+P E AVCNLASI+L + V VP + G GS F
Sbjct: 423 GTIKCSNLCTEIVEYTAPDEAAVCNLASISLSKLV----VPGQ------YGQGGS----F 468
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DFEKL EV+G+VT+NLN+IID N+YP+E ARRSN+RHRPIGIGVQGLAD F +L +PFDS
Sbjct: 469 DFEKLREVSGVVTKNLNRIIDRNFYPIEEARRSNMRHRPIGIGVQGLADCFQMLRIPFDS 528
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LN DIFETIY+ A S ++AA +G YE+Y GSP SKG LQ D+W V PS+RWDW
Sbjct: 529 PEARKLNTDIFETIYFGACTASCDLAAVDGHYESYPGSPSSKGQLQFDLWNVQPSNRWDW 588
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+++G+RNSLLVAPMPTAST+QILGNNE EP+TSN+Y+RRVL+GEF VVNKHL
Sbjct: 589 ASLKAKIAEHGIRNSLLVAPMPTASTAQILGNNESTEPFTSNMYNRRVLAGEFTVVNKHL 648
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L +LT G+W+ ++N+II ++GS+Q +P+IP E++ I+KTVWEI Q+ ++DMA DR Y
Sbjct: 649 LRELTARGIWTENVRNRIIAENGSIQNVPEIPVEIREIFKTVWEIPQRAILDMAADRAPY 708
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
I SQSLN+H+ PN KLTS+HF+AW +GLKTGMYYLR+R ADAIKFTVD L N
Sbjct: 709 ICQSQSLNVHIADPNSKKLTSMHFYAWQKGLKTGMYYLRTRPKADAIKFTVDQEQLVSNK 768
Query: 781 ----KVTDDDDA--------------KMAQMVCSLTNREECMACGS 808
K+ D +++ K Q + + + C++CG+
Sbjct: 769 MKEVKLVDKENSSNMVTPPPPGATAMKGTQGLTTEDEEDMCLSCGA 814
>gi|410972848|ref|XP_003992868.1| PREDICTED: LOW QUALITY PROTEIN: ribonucleoside-diphosphate
reductase large subunit [Felis catus]
Length = 790
Score = 1103 bits (2853), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 532/811 (65%), Positives = 648/811 (79%), Gaps = 24/811 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG+QE V FDKIT+R++KL YGL+++ DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT HPDYA LAARI VSNLHK TKK FS+ ++D+YN+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKST 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI+ N RL+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRV+VGIH+
Sbjct: 121 LDIVXANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHE 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+AI+TY+++S++WFTHASPTLFNA Q S+CFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSEKWFTHASPTLFNAEL--FQPSNCFLLSMKDDSIEGIYDTLKQCAL 238
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 239 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 298
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV++N WSL CPNE PGL
Sbjct: 299 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 358
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE+LY YEK+G+ +KVV+AQ LW+ I++SQ ETGTPYML+KD+CN+KSNQQNL
Sbjct: 359 EVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 418
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YTS E AVCNLAS+AL YV + +
Sbjct: 419 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 459
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLAEVT ++ NLNKIID+NYYPV A SN RHRPIGIGVQGLAD FIL+ PF+S
Sbjct: 460 DFKKLAEVTKVIVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 519
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S ++A GPYETY GSPVSKGILQ DMW V P+D WDW
Sbjct: 520 PEAQLLNKQIFETIYYGALEASCDLAKEHGPYETYEGSPVSKGILQYDMWNVIPTDLWDW 579
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 580 KLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 639
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE GLW+ +KN+II +GS+Q IP+IP++LK +YKTVWEI QKT++ MA +RG +
Sbjct: 640 LKDLTERGLWNEEMKNQIIACNGSIQNIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 699
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR+R AA+ I+FT++ LK+
Sbjct: 700 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 759
Query: 781 KVTDDDDA---KMAQMVCSLTNREECMACGS 808
K T +++ A MVCSL NREEC+ CGS
Sbjct: 760 KATKEEEEKERNTAAMVCSLENREECLMCGS 790
>gi|384097000|ref|ZP_09998121.1| ribonucleoside-diphosphate reductase, large subunit [Imtechella
halotolerans K1]
gi|383836968|gb|EID76368.1| ribonucleoside-diphosphate reductase, large subunit [Imtechella
halotolerans K1]
Length = 793
Score = 1103 bits (2853), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/816 (63%), Positives = 643/816 (78%), Gaps = 31/816 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG+QE V FDKITAR++KL YGL+ + DPV V+ +V G+Y GVTTS+LD LA
Sbjct: 1 MYVLKRDGRQEPVMFDKITARVRKLCYGLN-DLVDPVKVAMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA MTT HPDYA LAARI VSNLHKNTKKSFSET+ D+YN+ N R+ APLI+D+V
Sbjct: 60 AEIAATMTTTHPDYARLAARISVSNLHKNTKKSFSETMNDLYNYVNPRTEQAAPLISDEV 119
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+DII NA LDS IIY+RDF YDYFGFKTLERSYLLK+ G +VERPQHMLMRVAVGIH
Sbjct: 120 HDIIQANADFLDSTIIYNRDFGYDYFGFKTLERSYLLKINGNIVERPQHMLMRVAVGIHL 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD++S ++TY +MS+++FTHA+PTLFN+GTP+ Q+SSCFL+ MKDDSI+GIYDTLK+ A
Sbjct: 180 DDMESVVETYELMSKKYFTHATPTLFNSGTPKPQMSSCFLLTMKDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYI GTNGTSNGIVPMLRV+NDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIAGTNGTSNGIVPMLRVYNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWHADI +FLDL+KNHGKEE RARDLFYA+W+PDLFM+RVQ + W+L CPNE PGL
Sbjct: 300 IEPWHADIMDFLDLKKNHGKEEMRARDLFYAMWIPDLFMKRVQEDSRWTLMCPNECPGLY 359
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D FE LY +YE EGK +K ++A+ LW +IL+SQIETGTPYML+KD N+KSNQ+NL
Sbjct: 360 DVHSDSFEELYLRYEAEGKGRKTIKARELWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++YT+P E AVCNLAS+ALP +V KN F
Sbjct: 420 GTIRSSNLCTEIMEYTAPDEVAVCNLASVALPMFV--------------------KNGEF 459
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D ++L +VT VT NLN++ID NYYPV A+ SN RHRP+G+GVQGLADTFI+L MPF S
Sbjct: 460 DHKELFKVTKRVTRNLNRVIDRNYYPVIEAQNSNFRHRPVGLGVQGLADTFIMLRMPFTS 519
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP---SDR 597
EA++LN++IFET+Y+ A+ S E+A EGPY+T+ GSP+S+G Q +MWG+ S R
Sbjct: 520 DEAKKLNQEIFETMYFAAVTASMELAKEEGPYDTFKGSPISQGEFQHNMWGIKDEELSGR 579
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + KNGVRNSLL+APMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWAKLRKDVIKNGVRNSLLMAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
KHLL DL +GLW+ +K +I+ +GS+Q+I IP E+K +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLEDLVALGLWNEDLKQEIMRANGSIQEIDIIPHEIKELYKTVWELSMKDIIDMSRQR 699
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTS--- 774
G +ID SQSLN+ M+ KLTS+HF+AW GLKTGMYYLR+++A DAIKFTV
Sbjct: 700 GYFIDQSQSLNLFMEGATMAKLTSMHFYAWKSGLKTGMYYLRTKSAVDAIKFTVQKKQET 759
Query: 775 --VLKENPKVTDDDDAKMAQMVCSLTNREECMACGS 808
+ P +D+ A +AQ S ++C+ CGS
Sbjct: 760 KPTAESQPLTSDELKAMIAQAKAS--EGDDCLMCGS 793
>gi|343425606|emb|CBQ69140.1| probable RNR1-ribonucleoside-diphosphate reductase large subunit
[Sporisorium reilianum SRZ2]
Length = 897
Score = 1103 bits (2853), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/778 (64%), Positives = 626/778 (80%), Gaps = 18/778 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
+YV KRDG++E V FDK+TAR+ KL YGL + DP+ +++KV G+Y+GVTT +LD LA
Sbjct: 2 IYVYKRDGRKEVVKFDKVTARISKLCYGLDQNYVDPIEITRKVIDGIYEGVTTVELDNLA 61
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA TT HPDYA LAARI +SNLHK T+K+FS+ ++D+Y + N ++G +P+I+D
Sbjct: 62 AETAAYKTTTHPDYAVLAARIAISNLHKETRKNFSQVVQDLYEYVNPKNGRHSPMISDTT 121
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y ++M++ +LDS IIY+RDF Y++FGFKTLERSYLL++ GKV ERPQHMLMRVAVGIH
Sbjct: 122 YKVVMEHKDQLDSAIIYERDFHYNFFGFKTLERSYLLRINGKVAERPQHMLMRVAVGIHG 181
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DIDSAI+TY++MSQ++FTHASPTLFNAGTP QLSSCFLV MKDDSI+GIYDTLK CA+
Sbjct: 182 QDIDSAIETYNLMSQKYFTHASPTLFNAGTPHPQLSSCFLVTMKDDSIDGIYDTLKTCAM 241
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+++H IR TGSYI GTNG SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 242 ISKTAGGIGLNIHCIRGTGSYIAGTNGVSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 301
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWH+D+FEFLDLRKNHGKEE RAR+LFYALWVPDLFM+RV+ NG WSL CPNE PGLA
Sbjct: 302 IEPWHSDVFEFLDLRKNHGKEEVRARELFYALWVPDLFMKRVEQNGDWSLMCPNECPGLA 361
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EFERLY +YE EG+ K+ V+AQ LW+ IL+SQ ETG P++L+KD N+KSNQ+NL
Sbjct: 362 DCYGDEFERLYERYEAEGRFKRTVKAQKLWYAILESQTETGNPFILYKDAANRKSNQKNL 421
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+I+Y++P E AVCNLASIALP ++ + + +
Sbjct: 422 GTIKCSNLCTEIIEYSAPDEVAVCNLASIALPTFIDPV------------------TKTY 463
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF++L EV + +NLNKIID+NYYPVE ARRSN+RHRPIGIGVQGLAD F+++G F+S
Sbjct: 464 DFKRLHEVAKAICKNLNKIIDINYYPVEEARRSNMRHRPIGIGVQGLADAFMIMGYAFES 523
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LN IFETIY+ AL S E+A G YETY GSP S+G LQ DMWGV PSD WDW
Sbjct: 524 PEARRLNVQIFETIYHAALERSCELAQEHGTYETYAGSPASQGELQYDMWGVTPSDLWDW 583
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+K+G+RNSLL+APMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 584 AELKAKIAKHGLRNSLLLAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 643
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L +L E GLW+ +KN+II GS+Q +P IPE +K +YKTVWEI QK ++DMA DRG +
Sbjct: 644 LRELVEQGLWNDTMKNRIIAHGGSIQNVPGIPERIKKLYKTVWEISQKAIIDMAADRGAF 703
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE 778
I SQSLNIH+ P FG+LTS+HF+ W +GLKTG YYLR++ A++AI+FT+ + + E
Sbjct: 704 ICQSQSLNIHLSAPTFGQLTSMHFYGWKKGLKTGTYYLRTKPASNAIQFTLSVAEVNE 761
>gi|426195743|gb|EKV45672.1| hypothetical protein AGABI2DRAFT_223838 [Agaricus bisporus var.
bisporus H97]
Length = 868
Score = 1103 bits (2853), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/780 (65%), Positives = 625/780 (80%), Gaps = 20/780 (2%)
Query: 2 YVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAA 61
+V KR ++E V FDKIT+R++KL YGL + DPV V+QKV GVY+GVTT +LD LA+
Sbjct: 3 FVFKRGIRKERVQFDKITSRIEKLCYGLDTNYVDPVEVTQKVVQGVYQGVTTVELDNLAS 62
Query: 62 ETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVY 121
ETAA +TT HPDYA LAARI +SNLHK TKK+FS+ I D+Y++ N ++G A +I+ + Y
Sbjct: 63 ETAAYLTTKHPDYAVLAARIAISNLHKETKKTFSQVISDLYHYINPKNGKPAGMISKETY 122
Query: 122 DIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKD 181
D++MK+A L+S IIY RDF+Y+YFGFKTLERSYLL++ +V ERPQHM+MRVAVGIH +
Sbjct: 123 DVVMKHADTLNSAIIYTRDFNYNYFGFKTLERSYLLRINNRVAERPQHMIMRVAVGIHGE 182
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAII 241
DID ++TY++MS+R+FTHASPTLFNAGTP QLSSCFLVCMKDDSIEGIYDTLK CA+I
Sbjct: 183 DIDRVMETYNLMSERYFTHASPTLFNAGTPHPQLSSCFLVCMKDDSIEGIYDTLKSCAMI 242
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SK+AGGIG+++H IRATGSYI GTNG SNGIVPMLR ++ TARYVDQGG KR GAFA+YL
Sbjct: 243 SKTAGGIGLNIHCIRATGSYIAGTNGYSNGIVPMLRAYDATARYVDQGGNKRPGAFAIYL 302
Query: 302 EPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLAD 361
EPWHAD+F+FLDLRKNHGKEE RARDLFYALW+PDLFM+RV++NG WSLFCP+EAPGL +
Sbjct: 303 EPWHADVFDFLDLRKNHGKEEARARDLFYALWIPDLFMKRVEANGDWSLFCPSEAPGLHE 362
Query: 362 CWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG 421
WG EFE LY KYEKEG+ +K + AQ LW+ IL+SQIETG P+M++KD N KSNQ+NLG
Sbjct: 363 VWGPEFEALYEKYEKEGRQRKTMPAQKLWYAILESQIETGGPFMVYKDHANSKSNQKNLG 422
Query: 422 TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFD 481
TIKSSNLCTE+I+Y+SP ETAVCNLAS+ALP ++ N +D
Sbjct: 423 TIKSSNLCTEIIEYSSPDETAVCNLASLALPTFI--------------------NNGKYD 462
Query: 482 FEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDST 541
F+KL EV + NLN+IIDVNYYP+ ARRSN+RHRPIGIGVQGLADTF+ L MPFDS
Sbjct: 463 FQKLHEVAKVAAFNLNRIIDVNYYPIPEARRSNMRHRPIGIGVQGLADTFMALRMPFDSP 522
Query: 542 EAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWG 601
EA+ LN IFETIY+ AL SSE+A EG YETY GSPVS+G LQ D+WG+ P+D WDW
Sbjct: 523 EAKLLNIQIFETIYHGALEASSEMAVSEGRYETYEGSPVSQGQLQYDLWGITPTDLWDWT 582
Query: 602 GLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
L+ I++ G+RNSLLV+PMPTASTSQILGNNECFEPYTSNIY+RRVL+GEF VV LL
Sbjct: 583 SLKQQIARTGIRNSLLVSPMPTASTSQILGNNECFEPYTSNIYTRRVLAGEFQVVCPWLL 642
Query: 662 HDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYI 721
+L + LW +KN II +GSVQ IP IP ++KAIYKTVWEI QK ++D+A DRG +I
Sbjct: 643 RELVGLDLWDDNMKNMIIAHNGSVQNIPNIPADVKAIYKTVWEISQKKVLDLAADRGPFI 702
Query: 722 DHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPK 781
SQSLN+H+ P G+LTS+HF+ W +GLKTGMYYLR+R AA AI+FTVD SVL + K
Sbjct: 703 CQSQSLNVHLQSPTLGQLTSMHFYGWKKGLKTGMYYLRTRPAAQAIQFTVDQSVLNQAKK 762
>gi|336370235|gb|EGN98576.1| hypothetical protein SERLA73DRAFT_92011 [Serpula lacrymans var.
lacrymans S7.3]
gi|336382991|gb|EGO24141.1| hypothetical protein SERLADRAFT_450431 [Serpula lacrymans var.
lacrymans S7.9]
Length = 889
Score = 1103 bits (2852), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/780 (64%), Positives = 629/780 (80%), Gaps = 20/780 (2%)
Query: 2 YVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAA 61
+V KR ++E V FDKITAR+ KL YGL +++ DP+ ++QKV GVY+GVTT +LD LAA
Sbjct: 3 FVFKRGSRKERVQFDKITARINKLCYGLDVDYVDPIEITQKVIAGVYQGVTTVELDNLAA 62
Query: 62 ETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVY 121
ETAA +TT HPDYA LAARI +SNLHK TKK+FS+ +KD+Y + N ++G A +I+ + Y
Sbjct: 63 ETAAYLTTKHPDYAILAARIAISNLHKETKKNFSQVVKDLYEYINPKNGRAASMISKETY 122
Query: 122 DIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKD 181
+++ +A LDS IIYDRDF Y++FGFKTLERSYLL++ +V ERPQHM+MRVAVGIH
Sbjct: 123 EVVQAHAETLDSAIIYDRDFHYNFFGFKTLERSYLLRINNRVAERPQHMIMRVAVGIHGS 182
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAII 241
DID ++TYH+MS+R+FTHASPTLFNAGTP QLSSCFLVCMKDDSIEGIYDTLK CA+I
Sbjct: 183 DIDRVLETYHLMSERYFTHASPTLFNAGTPHPQLSSCFLVCMKDDSIEGIYDTLKNCAMI 242
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SK+AGGIG+++H IRATGSYI GTNG SNGIVPMLR ++ TARYVDQGG KR GAFA+YL
Sbjct: 243 SKTAGGIGLNIHCIRATGSYIAGTNGYSNGIVPMLRAYDATARYVDQGGNKRPGAFAIYL 302
Query: 302 EPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLAD 361
EPWH DIF+F+DLRKNHGKEE RARDLFYALW+PDLFM+RV++NG WSLFCPNEAP L +
Sbjct: 303 EPWHNDIFDFIDLRKNHGKEESRARDLFYALWIPDLFMKRVEANGEWSLFCPNEAPNLHE 362
Query: 362 CWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG 421
+G EFE LY KYEKEG++++ + AQ LW+ IL++QIETG P+M +KD N+KSNQ+NLG
Sbjct: 363 VYGEEFEALYEKYEKEGRSRRTIPAQKLWYAILEAQIETGGPFMCYKDAANRKSNQKNLG 422
Query: 422 TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFD 481
TIKSSNLCTE+I+Y+SP ETAVCNLAS+ALP ++ N +D
Sbjct: 423 TIKSSNLCTEIIEYSSPDETAVCNLASMALPSFI--------------------VNGKYD 462
Query: 482 FEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDST 541
F+KL +V ++T+NLN+IIDVNYYP ARRSN+RHRPIG+GVQGLAD F+ L MPFDS
Sbjct: 463 FQKLHDVAKVITKNLNRIIDVNYYPTPEARRSNMRHRPIGVGVQGLADAFMALRMPFDSP 522
Query: 542 EAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWG 601
EA++LN IFETIY+ AL +SSE+A +EGPYET+ GSP +G LQ D+WGV P+D WDW
Sbjct: 523 EAKELNIQIFETIYHAALESSSELAEKEGPYETWKGSPAEQGQLQFDLWGVTPTDLWDWT 582
Query: 602 GLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
L++ I++ G+RNSLL+APMPTASTSQILG NECFEPYTSNIY+RRVL+GEF +V LL
Sbjct: 583 SLKERIARTGLRNSLLLAPMPTASTSQILGFNECFEPYTSNIYTRRVLAGEFQIVCPWLL 642
Query: 662 HDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYI 721
+L ++GLW+ +KN II ++GS+Q I IPE++KAIYKTVWEI QK ++D+A DRG +I
Sbjct: 643 RELVDLGLWNDQMKNMIIANNGSIQSIIGIPEDVKAIYKTVWEISQKKVIDLAADRGAFI 702
Query: 722 DHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPK 781
SQSLNIH+ P G+LTS+HF+ W +GLKTGMYY+R+R AA AI+FTVD S +K+ K
Sbjct: 703 CQSQSLNIHLQSPTLGQLTSMHFYGWKKGLKTGMYYMRTRPAAQAIQFTVDQSFIKDAQK 762
>gi|190346673|gb|EDK38820.2| hypothetical protein PGUG_02918 [Meyerozyma guilliermondii ATCC
6260]
Length = 863
Score = 1102 bits (2851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/775 (64%), Positives = 630/775 (81%), Gaps = 16/775 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG++E V FDKITAR+++L YGL H D V ++Q+V +GVY+GV T +LD LA
Sbjct: 1 MYVYKRDGRKEPVRFDKITARVQRLCYGLDTAHVDAVAITQRVISGVYQGVNTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA LAARI VSNLHK T K FS+ K++Y++ N ++ L +P+I+ +
Sbjct: 61 AETAAYMTTIHPDYAILAARIAVSNLHKQTTKQFSQVSKELYDYINPKTDLHSPMISKET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YD+I K+A L+S I++DRDF+Y+YFGFKTLERSYLL++ GKV ERPQH++MRVAVGIH
Sbjct: 121 YDVIQKHADELNSAIVFDRDFNYNYFGFKTLERSYLLRINGKVAERPQHLIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDI+ I++Y++MSQR+FTH SPTLFNAGTP Q+SSCFLV MK+DSI+GIYDTLK CA+
Sbjct: 181 DDIEKVIESYNLMSQRYFTHGSPTLFNAGTPSPQMSSCFLVAMKEDSIDGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+ +HNIR TG+YI GTNGTSNGI+PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLHIHNIRGTGAYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DIFEF+D+RKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF PNEAPGL
Sbjct: 301 LEPWHSDIFEFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNGDWTLFSPNEAPGLP 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ +G EFE LY KYE+EG+ + ++AQ LW+ IL++Q ETGTP+ML+KD CNKK+NQ+NL
Sbjct: 361 EVYGDEFEALYEKYEREGRGRSTIKAQKLWYAILEAQTETGTPFMLYKDACNKKTNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G IKSSNLC E+++Y+SP E AVCNLASIALP +V + + ++
Sbjct: 421 GIIKSSNLCCEIVEYSSPEEVAVCNLASIALPSFVES----------------DNNSTWY 464
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+F+KL EVT VT NLN+IID NYYPV ARRSN+R+RPI +GVQGLAD F+ L +PFDS
Sbjct: 465 NFDKLHEVTKTVTGNLNRIIDRNYYPVPEARRSNMRNRPIALGVQGLADAFMALRLPFDS 524
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LN IFETIY+ A+ S E+A +EGPYE+Y GSP S+G+LQ D+W P++ WDW
Sbjct: 525 QEAKELNIQIFETIYHGAVEASIELAQKEGPYESYEGSPASQGLLQFDLWDRKPTELWDW 584
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ ++K+G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL+GEF +VN +L
Sbjct: 585 DTLKQKMAKHGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQIVNPYL 644
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++GLW+ +KN II ++GS+Q +P IP+E+KA+YKTVWEI QK ++DMA DR +
Sbjct: 645 LRDLVDLGLWNDSMKNNIISNNGSIQNLPNIPDEIKALYKTVWEISQKHIIDMAADRAAF 704
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
ID SQSLNIH+ P GKLTS+HF+ W +GLKTGMYYLR++AAA AI+FTVD+S
Sbjct: 705 IDQSQSLNIHIKDPTMGKLTSMHFYGWKKGLKTGMYYLRTQAAAAAIQFTVDSST 759
>gi|332876815|ref|ZP_08444572.1| ribonucleoside-diphosphate reductase, alpha subunit [Capnocytophaga
sp. oral taxon 329 str. F0087]
gi|332685241|gb|EGJ58081.1| ribonucleoside-diphosphate reductase, alpha subunit [Capnocytophaga
sp. oral taxon 329 str. F0087]
Length = 777
Score = 1102 bits (2851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/808 (64%), Positives = 647/808 (80%), Gaps = 31/808 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+GK+EAVHFDKITAR+ KL YGLSI D + +++KV G+Y +TT++LD LA
Sbjct: 1 MFVIKRNGKKEAVHFDKITARIHKLIYGLSISEKDVIEIAKKVIQGIYDNITTTELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAAA TT HPD++ LAARI VSNLHKNT KSFS+T + +Y + + + APLI++++
Sbjct: 61 AETAAAQTTIHPDFSVLAARIAVSNLHKNTLKSFSKTAQLLYEYTDPITQTHAPLISEEI 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y II KNA LDS +IYDRD+++DYFGFKTLERSYL++ GKV ERPQH+ MRVA+GI+K
Sbjct: 121 YKIIRKNADELDSSVIYDRDYNFDYFGFKTLERSYLIRTNGKVTERPQHLFMRVALGIYK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI +AI+TY++MS++WF HA+PTLFNAGTP+ Q+SSCFL+ M +DSI GI+DTLK CA+
Sbjct: 181 EDIQAAIETYNLMSEKWFIHATPTLFNAGTPKPQMSSCFLLSMTEDSIAGIFDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIGVS+HNIR+TGSYI+GT G SNGI+PMLRVFNDTARYVDQGGGKRKGA AVY
Sbjct: 241 ISQSAGGIGVSIHNIRSTGSYIKGTGGISNGIIPMLRVFNDTARYVDQGGGKRKGAIAVY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWH DIF+F+D+RKNHGKEE RARDLF ALW+PDLFM+RV+++ +WSLF PNEA GL
Sbjct: 301 IEPWHLDIFDFIDIRKNHGKEEMRARDLFPALWIPDLFMQRVEADQMWSLFDPNEAQGLY 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ +G +F LYT YE EGK +K ++A+ LW IL++QIETGTPYM +KD N+KSNQ+N+
Sbjct: 361 EVYGEKFNELYTTYENEGKFRKQIKARELWTAILEAQIETGTPYMCYKDAVNEKSNQKNI 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++YT+ E AVCNLAS+ALPRYV G F
Sbjct: 421 GTIRSSNLCTEIMEYTNADEVAVCNLASLALPRYVSSGG--------------------F 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EVT IVT NLNKIID NYYP+ + SN RHRPIG+GVQGLAD F+LL +PF+S
Sbjct: 461 DFQKLYEVTKIVTRNLNKIIDGNYYPIPETKTSNDRHRPIGLGVQGLADVFLLLRLPFES 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LNKDIFETIY+ ++ S ++A +G Y ++ GSP+S+G Q D+W V PSDRWDW
Sbjct: 521 PEARRLNKDIFETIYFASMEASMDLAKEQGAYSSFAGSPLSEGKFQFDLWQVVPSDRWDW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR + +GVRNSLL+APMPTASTSQILGNNECFEPYTSNIY+RRVLSGEFVVVNK L
Sbjct: 581 EKLRQEVMTHGVRNSLLLAPMPTASTSQILGNNECFEPYTSNIYNRRVLSGEFVVVNKFL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL E+GLW+P +KNK+I ++GSVQ IP+IP ELK +YKTVWEIKQKT++DMA +RG +
Sbjct: 641 LKDLIELGLWNPTMKNKLIAENGSVQNIPEIPTELKELYKTVWEIKQKTIIDMAAERGAF 700
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
I SQSLN+ M +PN KLTS+HFHAW GLKTGMYYLR++AA DAIKFTVDT +L
Sbjct: 701 ICQSQSLNLFMAEPNLAKLTSMHFHAWKSGLKTGMYYLRTKAAVDAIKFTVDTQLL---- 756
Query: 781 KVTDDDDAKMAQMVCSLTNREECMACGS 808
+Q+ CSL N EEC+ACGS
Sbjct: 757 -------LGQSQVACSLDNPEECLACGS 777
>gi|423328774|ref|ZP_17306581.1| ribonucleoside-diphosphate reductase, alpha subunit [Myroides
odoratimimus CCUG 3837]
gi|404604336|gb|EKB03970.1| ribonucleoside-diphosphate reductase, alpha subunit [Myroides
odoratimimus CCUG 3837]
Length = 797
Score = 1102 bits (2851), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/818 (63%), Positives = 645/818 (78%), Gaps = 31/818 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG++E V FDKIT R++ L Y L+ E DPV V+ +V G+Y GV TS+LD LA
Sbjct: 1 MYVIKRDGRREPVSFDKITDRIRILCYELN-EFVDPVKVAMRVIEGLYDGVATSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA+MT HPDYA LAARI VSNLHKNTKK FSET++D+Y + N R+G +APLIADDV
Sbjct: 60 AETAASMTVTHPDYALLAARIAVSNLHKNTKKVFSETVEDLYRYVNPRTGQEAPLIADDV 119
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y++I K++ RLDS IIY RDF+YDYFGFKTLERSYLLK+ GK+VERPQHMLMRVAVGIH
Sbjct: 120 YEVIKKHSERLDSTIIYQRDFNYDYFGFKTLERSYLLKLNGKIVERPQHMLMRVAVGIHL 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDIDS I+TY +MS+++FTHA+PTLFN+GTP+ Q+SSCFL+ MKDDSIEGIYDTLK+ A
Sbjct: 180 DDIDSVIETYELMSKKYFTHATPTLFNSGTPKPQMSSCFLLTMKDDSIEGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HNIRATGSYIRGTNGTSNGIVPMLRV+NDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNIRATGSYIRGTNGTSNGIVPMLRVYNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+F+F++LRKNHGKEE RARDLF ALW+ DLFM+RV+++ W+L CPNE PGL
Sbjct: 300 LEPWHADVFDFIELRKNHGKEEMRARDLFLALWINDLFMQRVEADEKWTLMCPNECPGLC 359
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE+LY KYE EGK ++ ++A+ LW +L++QIETGTPYML+KD N KSNQ+NL
Sbjct: 360 DVYGEEFEQLYLKYENEGKGRRTIKARELWEAVLEAQIETGTPYMLYKDAANAKSNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G I+SSNLCTE+++YTSP E AVCNLASI+LP +V + G N F
Sbjct: 420 GVIRSSNLCTEIMEYTSPDEVAVCNLASISLPMFVED----------------GQFNHQF 463
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
F +VT +T NLN++ID NYYPVE A SN+RHRP+G+GVQGLAD FI++ MPF S
Sbjct: 464 LF----DVTKRITRNLNRVIDRNYYPVEEAYNSNMRHRPVGLGVQGLADAFIMMRMPFTS 519
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP---SDR 597
EA+QLN++IFETIY+ AL S E+A EG Y T+ GSP+SKG Q +MWGV S R
Sbjct: 520 PEAKQLNQEIFETIYFAALTASMEMAKEEGAYSTFEGSPISKGEFQYNMWGVKDEELSGR 579
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + NGVRNSLL+APMPTASTSQILGNNE FEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWASLRKEVMANGVRNSLLLAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
KHLL DL E+GLW+ +K +I+ +GS+Q I IP +++ +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLKDLVELGLWNEDLKQEIMRANGSIQHIDFIPADIRELYKTVWELSMKDIIDMSRQR 699
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDT---- 773
G +ID SQSLN+ M+ N+ KLTS+HF+AW GLKTGMYYLR+++A DAIKFT++
Sbjct: 700 GYFIDQSQSLNLFMEGANYAKLTSMHFYAWKSGLKTGMYYLRTKSAVDAIKFTLNNEKKA 759
Query: 774 --SVLKENPKVTDDDDAKMAQMV-CSLTNREECMACGS 808
+ ++E +V+ +D M Q + N E+C CGS
Sbjct: 760 NPNAIEEVEQVSVEDYQAMLQRARMAANNDEDCEMCGS 797
>gi|384493683|gb|EIE84174.1| ribonucleoside-diphosphate reductase large chain [Rhizopus delemar
RA 99-880]
Length = 757
Score = 1102 bits (2850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/776 (65%), Positives = 624/776 (80%), Gaps = 21/776 (2%)
Query: 31 IEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNT 90
+ + DPV ++QKV +GVY+GVTT +LD LAAETAA MTT HPDYA LAARI +SNLHK T
Sbjct: 1 MNYVDPVAITQKVISGVYEGVTTVELDNLAAETAAYMTTRHPDYALLAARIAISNLHKET 60
Query: 91 KKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKT 150
KK FS+ I+D+YN+ N ++ +P+I+D Y ++ NA RL+S IIYDRDF Y++FGFKT
Sbjct: 61 KKVFSQVIEDLYNYVNPKTNKHSPMISDTTYKVVQDNAERLNSAIIYDRDFKYNFFGFKT 120
Query: 151 LERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGT 210
LERSYLLK+ GK ERPQH++MRVA+GIH +DID+AI+TY++MS+++FTHASPTLFNAGT
Sbjct: 121 LERSYLLKIDGKTAERPQHLIMRVAIGIHGEDIDAAIETYNLMSEKFFTHASPTLFNAGT 180
Query: 211 PRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSN 270
PR Q+SSCFL+ MK+DSIEGIY+TLK CA ISK+AGGIG+++HNIRA GSYI GTNG SN
Sbjct: 181 PRPQMSSCFLLTMKEDSIEGIYETLKICAQISKTAGGIGLNIHNIRANGSYIAGTNGYSN 240
Query: 271 GIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFY 330
G++PMLRVFN+TARYVDQGG KR GAFA+YLEPWHADIF FLDLRKN GK+E RARDLFY
Sbjct: 241 GLLPMLRVFNNTARYVDQGGNKRPGAFAMYLEPWHADIFTFLDLRKNFGKDEIRARDLFY 300
Query: 331 ALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLW 390
ALWVPDLFM+RV+ G WSLFCPNEAPGL D WG EF LY YE+EG+A++ ++AQ LW
Sbjct: 301 ALWVPDLFMQRVKDGGDWSLFCPNEAPGLQDVWGDEFVALYESYEREGRARETIKAQKLW 360
Query: 391 FEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIA 450
+ IL++Q ETG P+ML+KD CN+KSNQQNLGTIK SNLCTE+++YTSP E AVCNLASIA
Sbjct: 361 YAILEAQTETGNPFMLYKDACNRKSNQQNLGTIKCSNLCTEIVEYTSPDEVAVCNLASIA 420
Query: 451 LPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETA 510
LP +V + ES +DF++L EV ++T NLNKIID+NYYPV A
Sbjct: 421 LPTFV----INRES---------------YDFKRLHEVAKVITRNLNKIIDINYYPVIEA 461
Query: 511 RRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREG 570
RSN RHRPIG+GVQGLADTF+ L PFDS EA+QLN IFETIY+ AL S E+A + G
Sbjct: 462 ERSNKRHRPIGLGVQGLADTFMALRYPFDSPEAKQLNIQIFETIYHAALEASCELAEKYG 521
Query: 571 PYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQIL 630
PYETY GSPVSKGILQ DMW V P+ WDW L++ I+K+GVRNSLL+APMPTASTSQ+L
Sbjct: 522 PYETYEGSPVSKGILQYDMWNVTPTSLWDWASLKEKIAKHGVRNSLLLAPMPTASTSQML 581
Query: 631 GNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQ 690
G NECFEPYTSN Y+RRVLSGE+ +VN LL DL +MG+W+ +KN I+ D GSVQ +P
Sbjct: 582 GFNECFEPYTSNFYTRRVLSGEYQMVNPWLLRDLVDMGIWNDEVKNMIMADGGSVQNVPT 641
Query: 691 IPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRG 750
IP+ LK +YKTVWEI Q+T+VDMA DRG YID SQSLNI + +PNFGKLTS+HF+ W +G
Sbjct: 642 IPQHLKELYKTVWEISQRTIVDMAADRGAYIDQSQSLNIFIAEPNFGKLTSMHFYGWQKG 701
Query: 751 LKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
LKTGMYYLR+R A DAIKFTVD L+E K ++ + A MVCS+ N++ CM+C
Sbjct: 702 LKTGMYYLRTRPAVDAIKFTVDQVSLREYRKKMEEKN--QADMVCSIDNKDACMSC 755
>gi|156836703|ref|XP_001642400.1| hypothetical protein Kpol_259p5 [Vanderwaltozyma polyspora DSM
70294]
gi|156112918|gb|EDO14542.1| hypothetical protein Kpol_259p5 [Vanderwaltozyma polyspora DSM
70294]
Length = 874
Score = 1102 bits (2850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/785 (63%), Positives = 636/785 (81%), Gaps = 14/785 (1%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG++E V FDKITAR+ +L YGL H DPV V+Q++ TGVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEPVRFDKITARISRLCYGLDPNHIDPVKVTQRIITGVYEGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA+LAAR+ +SNLHK T K FS+ + D+Y++ N + APL++++V
Sbjct: 61 AETAAYMTTVHPDYATLAARLAISNLHKQTTKLFSQVVDDLYHYINPENSKHAPLVSEEV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+I+M++ L+S I+YDRDF ++YFGFKTLERSYLL+++G+V ERPQH++MRVA+GIH
Sbjct: 121 YNIVMEHKDELNSAIVYDRDFQFNYFGFKTLERSYLLRMKGEVAERPQHLIMRVAIGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI++AI+TY++MSQR+FTHASPTLFNAGTP Q+SSCFLV MKDDS+EGI+DTLKECA+
Sbjct: 181 EDIEAAIETYNLMSQRYFTHASPTLFNAGTPHPQMSSCFLVAMKDDSLEGIFDTLKECAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIRATGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GA A+Y
Sbjct: 241 ISKTAGGIGLHIHNIRATGSYIAGTNGTSNGLIPMVRVFNNTARYVDQGGNKRPGAMALY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+F+D+RKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF P+EAPGL
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEENGDWTLFSPSEAPGLE 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ +G EFE LY +Y EG+ +K ++AQ LW+ IL++Q ETGTP+ML+KD CN KSN +NL
Sbjct: 361 EVYGEEFEALYNRYVAEGRGRKTIKAQKLWYSILEAQTETGTPFMLYKDACNTKSNHKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLC E+++Y++P ETAVCNLASIALP ++ S +++ +
Sbjct: 421 GTIKSSNLCCEIVEYSAPDETAVCNLASIALPAFIE--------------VSEDGRSQTY 466
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+F+KL E++ +VT NLNK+ID NYYPVE AR SN RHRPI +GVQGLADTF+LL +PF+S
Sbjct: 467 NFKKLHEISKVVTRNLNKVIDRNYYPVEEARNSNFRHRPIALGVQGLADTFMLLRIPFES 526
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LN IFET+Y+ AL S E+A +EG YE+Y SPVS+G+LQ DMW PSD WDW
Sbjct: 527 KEAKELNTHIFETMYHAALEASCELAEKEGYYESYPNSPVSQGVLQYDMWNRKPSDLWDW 586
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I K+GVRNSLL+APMPTASTSQILG NECFEP+TSN+Y RRVLSGEF +VN +L
Sbjct: 587 ATLKEQIKKHGVRNSLLLAPMPTASTSQILGYNECFEPFTSNMYQRRVLSGEFQIVNPYL 646
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W +K +I D+GS+Q +P IP+ELK +YKTVWEI QKT++DMA DR +
Sbjct: 647 LRDLVDLGIWDESMKQHLITDNGSIQNLPNIPQELKDLYKTVWEISQKTIIDMATDRSAF 706
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID S S+NIH+ P GKLTS+HF+ W +GLKTGMYYLR++AA+ AI+FT+D SV +
Sbjct: 707 IDQSHSMNIHIRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDKSVADQAA 766
Query: 781 KVTDD 785
K T D
Sbjct: 767 KSTAD 771
>gi|163753570|ref|ZP_02160693.1| ribonucleoside diphosphate reductase, alpha subunit [Kordia
algicida OT-1]
gi|161325784|gb|EDP97110.1| ribonucleoside diphosphate reductase, alpha subunit [Kordia
algicida OT-1]
Length = 812
Score = 1102 bits (2850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/774 (66%), Positives = 633/774 (81%), Gaps = 24/774 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+VVKRDG++E + FDKIT+R++KL YGL+ DPV V+ +V G+Y GVTTS+LD LA
Sbjct: 1 MFVVKRDGRKEPMMFDKITSRVRKLCYGLN-NLVDPVKVAMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA MTT HPDYA LAARI VSNLHKNTKKSFSET+ D+Y + N R+G KAPL++D+V
Sbjct: 60 AEIAATMTTTHPDYARLAARISVSNLHKNTKKSFSETMVDLYEYVNPRTGKKAPLLSDEV 119
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y++IM+NA RLDS IIY+RDF YDYFGFKTLERSYLLK+ GK+ ERPQHMLMRV+VGIH
Sbjct: 120 YNVIMENADRLDSTIIYNRDFGYDYFGFKTLERSYLLKLNGKIAERPQHMLMRVSVGIHL 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+D+D+AI+TY +MS+++FTHA+PTLFN+GTP+ Q+SSCFL+ M+DDSI+GIYDTLK+ A
Sbjct: 180 NDLDAAIETYELMSKKYFTHATPTLFNSGTPKPQMSSCFLLAMQDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYI GTNGTSNGIVPMLRV+NDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIAGTNGTSNGIVPMLRVYNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWHADIF+FLDL+KNHGKEE RARDLFYA+W+PDLFM+RV+ NG W+L CPNE P L
Sbjct: 300 VEPWHADIFDFLDLKKNHGKEEMRARDLFYAMWIPDLFMKRVEENGPWTLMCPNECPNLF 359
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ EFE LY KYE EGK +K ++A+ LW +IL+SQIETGTPYML+KD N+KSNQ+NL
Sbjct: 360 NVHSEEFEALYLKYEAEGKGRKTIKARELWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++YTSP E AVCNLASIALP ++ K F
Sbjct: 420 GTIRSSNLCTEIMEYTSPDEVAVCNLASIALPMFI--------------------KGGEF 459
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D ++L VT VT+NLNK+ID NYYPV+ A SN RHRPIG+GVQGLADTFI L MPF S
Sbjct: 460 DHKELFRVTKRVTKNLNKVIDRNYYPVKEAENSNFRHRPIGLGVQGLADTFIKLRMPFTS 519
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP---SDR 597
EA++LN++IFET+Y+ A+ S E+A EGPY+TY GSP+SKG Q ++WG+ S R
Sbjct: 520 DEAKKLNQEIFETLYFAAVTASMEMAKIEGPYQTYEGSPMSKGEFQHNLWGIKDEELSGR 579
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDWG LR ++KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWGKLRKQVAKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
KHLL DL +GLW+ +K +++ +GS+Q I +IP+++K +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLEDLVNLGLWTEDLKQELMRANGSIQHIDEIPQDIKDLYKTVWELSMKDIIDMSRHR 699
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTV 771
G +ID SQSLN+ M+ KLTS+HF+AW GLKTGMYYLR+++A DAIKFTV
Sbjct: 700 GYFIDQSQSLNLFMEGATMAKLTSMHFYAWRSGLKTGMYYLRTKSAVDAIKFTV 753
>gi|146418447|ref|XP_001485189.1| hypothetical protein PGUG_02918 [Meyerozyma guilliermondii ATCC
6260]
Length = 863
Score = 1102 bits (2850), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/775 (64%), Positives = 629/775 (81%), Gaps = 16/775 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG++E V FDKITAR+++L YGL H D V ++Q+V +GVY+GV T +LD LA
Sbjct: 1 MYVYKRDGRKEPVRFDKITARVQRLCYGLDTAHVDAVAITQRVISGVYQGVNTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA LAARI VSNLHK T K FS+ K++Y++ N ++ L +P+I+ +
Sbjct: 61 AETAAYMTTIHPDYAILAARIAVSNLHKQTTKQFSQVSKELYDYINPKTDLHSPMISKET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YD+I K+A L+S I++DRDF+Y+YFGFKTLERSYLL++ GKV ERPQH++MRVAVGIH
Sbjct: 121 YDVIQKHADELNSAIVFDRDFNYNYFGFKTLERSYLLRINGKVAERPQHLIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDI+ I++Y++MSQR+FTH SPTLFNAGTP Q+SSCFLV MK+DSI+GIYDTLK CA+
Sbjct: 181 DDIEKVIESYNLMSQRYFTHGSPTLFNAGTPSPQMSSCFLVAMKEDSIDGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+ +HNIR TG+YI GTNGTSNGI+PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLHIHNIRGTGAYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DIFEF+D+RKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF PNEAPGL
Sbjct: 301 LEPWHSDIFEFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNGDWTLFSPNEAPGLP 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ +G EFE LY KYE+EG+ + ++AQ LW+ IL++Q ETGTP+ML+KD CNKK+NQ+NL
Sbjct: 361 EVYGDEFEALYEKYEREGRGRSTIKAQKLWYAILEAQTETGTPFMLYKDACNKKTNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G IKSSNLC E+++Y+SP E AVCNLASIALP +V + + ++
Sbjct: 421 GIIKSSNLCCEIVEYSSPEEVAVCNLASIALPSFVES----------------DNNSTWY 464
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+F+KL EVT VT NLN+IID NYYPV ARRSN+R+RPI +GVQGLAD F+ L +PFDS
Sbjct: 465 NFDKLHEVTKTVTGNLNRIIDRNYYPVPEARRSNMRNRPIALGVQGLADAFMALRLPFDS 524
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LN IFETIY+ A+ S E+A +EGPYE+Y GSP S+G+LQ D+W P++ WDW
Sbjct: 525 QEAKELNIQIFETIYHGAVEASIELAQKEGPYESYEGSPASQGLLQFDLWDRKPTELWDW 584
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ ++K+G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL+GEF +VN +L
Sbjct: 585 DTLKQKMAKHGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQIVNPYL 644
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++GLW+ +KN II ++GS+Q +P IP+E+KA+YKTVWEI QK ++DMA DR +
Sbjct: 645 LRDLVDLGLWNDSMKNNIISNNGSIQNLPNIPDEIKALYKTVWEISQKHIIDMAADRAAF 704
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
ID SQSLNIH+ P GKLTS+HF+ W +GLKTGMYYLR++AAA AI+FTVD S
Sbjct: 705 IDQSQSLNIHIKDPTMGKLTSMHFYGWKKGLKTGMYYLRTQAAAAAIQFTVDLST 759
>gi|330805291|ref|XP_003290618.1| ribonucleotide reductase large subunit [Dictyostelium purpureum]
gi|325079257|gb|EGC32866.1| ribonucleotide reductase large subunit [Dictyostelium purpureum]
Length = 855
Score = 1102 bits (2849), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/795 (64%), Positives = 637/795 (80%), Gaps = 17/795 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLK---KLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLD 57
MYV+KRDG+++ V FDKIT+R++ ++ L+ E DP V+QKV +GV+ GV T++LD
Sbjct: 16 MYVIKRDGQKQNVTFDKITSRIRFLCEMEPRLNEEIVDPAEVAQKVISGVFPGVKTTELD 75
Query: 58 ELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIA 117
LAAETAA M+T HPDY LAARI VSNLHK T S ET+K Y + N ++ L APL++
Sbjct: 76 NLAAETAAYMSTRHPDYGVLAARISVSNLHKQTSTSLVETVKIQYEYINSKTNLPAPLVS 135
Query: 118 DDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVG 177
++YDI+ ++A RL+ I Y RDFDYD+FGFKTLERSYL ++ +VERPQHMLMRV++G
Sbjct: 136 KELYDIVNEHAERLEKAIDYQRDFDYDFFGFKTLERSYLHRINNSIVERPQHMLMRVSIG 195
Query: 178 IHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKE 237
IH +DID+AI TY +SQ+ FTHA+PTLFNAGTP Q+SSCFLV MK+DSI+GIYDTLK+
Sbjct: 196 IHGNDIDNAILTYEKLSQKLFTHATPTLFNAGTPYPQMSSCFLVQMKEDSIDGIYDTLKQ 255
Query: 238 CAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAF 297
CA+ISKSAGGIG++ H IRA SYIRGTNGTSNG+VPMLRVFNDTARYVDQGGGKRKGAF
Sbjct: 256 CALISKSAGGIGIACHKIRAAQSYIRGTNGTSNGLVPMLRVFNDTARYVDQGGGKRKGAF 315
Query: 298 AVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAP 357
AVYLEPWH+DIFEF++L+KNHGKEE RARDLFYALWV DLFMERV+ NG WSLFCPNEAP
Sbjct: 316 AVYLEPWHSDIFEFIELKKNHGKEEMRARDLFYALWVSDLFMERVEQNGDWSLFCPNEAP 375
Query: 358 GLADCWGTEFERLYTKYEK-EGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSN 416
L + E LY KYE G A++V++AQ LWF I++SQ+ETGTP++L+KD+CN KSN
Sbjct: 376 RLDETHSEEHRELYLKYENTPGLARRVIKAQELWFAIMESQVETGTPFILYKDSCNSKSN 435
Query: 417 QQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSK 476
Q+NLGTI SSNLCTE+IQYTSP E AVCNLASIALP+++R + GS K
Sbjct: 436 QKNLGTISSSNLCTEIIQYTSPDEIAVCNLASIALPKFIR-----------RKEGSTNPK 484
Query: 477 NRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGM 536
+ FD +KL E+T IVT+NLNKIID NYYPV+ A+ SNLRHRPIGIG+QGLAD FI L M
Sbjct: 485 EKEFDHQKLYEITKIVTKNLNKIIDRNYYPVQEAKTSNLRHRPIGIGIQGLADVFIQLRM 544
Query: 537 PFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSD 596
PFD T A +LN +I ETIY+ AL S E++ EGPYET+ GSP S+GILQ D W V P++
Sbjct: 545 PFDGTAAAKLNIEIAETIYFAALTASHELSLIEGPYETFKGSPASQGILQYDFWNVTPTN 604
Query: 597 RWDWGGLRD-MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVV 655
RW+W L+D +++K G+RNSLL+APMPTASTSQILGNNECFEPYTSNIYSRRVL+GEF +
Sbjct: 605 RWNWTDLKDKIVNKGGLRNSLLIAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFTI 664
Query: 656 VNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAV 715
VNK LL DL E+G+WSP +KN+I+ + GS+Q IP IP++LK +YKTVWEI+Q+TL+DMA
Sbjct: 665 VNKQLLEDLMELGIWSPELKNQIVLNRGSIQSIPSIPDDLKELYKTVWEIRQRTLIDMAA 724
Query: 716 DRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
DRG +ID SQS N+ + +P F KLTS+HF++W +GLKTGMYYLR+R AADAI+FTVD +V
Sbjct: 725 DRGAFIDQSQSFNVFIAEPTFAKLTSMHFYSWKKGLKTGMYYLRTRPAADAIQFTVDPTV 784
Query: 776 LKENPKVTDDDDAKM 790
++ PK + D +
Sbjct: 785 -QQTPKPVEKDQTPL 798
>gi|340617899|ref|YP_004736352.1| ribonucleoside-diphosphate reductase, large subunit [Zobellia
galactanivorans]
gi|339732696|emb|CAZ95964.1| Ribonucleoside-diphosphate reductase, large subunit [Zobellia
galactanivorans]
Length = 828
Score = 1102 bits (2849), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/783 (65%), Positives = 632/783 (80%), Gaps = 24/783 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG++E V FDKITAR++KL YGL+ DP+ V+ +V G+Y GVTTS+LD LA
Sbjct: 1 MFVIKRDGRKEMVMFDKITARVRKLCYGLN-GLVDPLKVAMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA MTT HPDYA LAARI VSNLHKNTKKSFSET+KD+Y + N R+ KAPL++D+V
Sbjct: 60 AEIAATMTTTHPDYAKLAARISVSNLHKNTKKSFSETMKDLYEYVNPRTNKKAPLLSDEV 119
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y +I +N+ RLDS IIY+RDF YDYFGFKTLERSYLLK+ GK+ ERPQHMLMRV+VGIH
Sbjct: 120 YKVISENSERLDSTIIYNRDFGYDYFGFKTLERSYLLKINGKIAERPQHMLMRVSVGIHL 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+D+D+AI+TY +MS+++FTHA+PTLFN+GTP+ Q+SSCFL+ MKDDSI+GIYDTLK+ A
Sbjct: 180 NDLDAAIETYELMSKKYFTHATPTLFNSGTPKPQMSSCFLLAMKDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYI GTNGTSNGIVPML+VFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIAGTNGTSNGIVPMLQVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWHADI+ FLDL+KNHGKEE RARDLFYA+W+ DLFM RV++N W+L CPNE PGL
Sbjct: 300 MEPWHADIYAFLDLKKNHGKEEMRARDLFYAMWISDLFMRRVEANEEWTLMCPNECPGLF 359
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
EFE LY KYE EGK +K V+A+ LW +IL+SQIETGTPYML+KD N+KSNQ+NL
Sbjct: 360 THHSEEFEELYLKYEAEGKGRKTVKARELWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++YTSP E AVCNLASIALP +V KN F
Sbjct: 420 GTIRSSNLCTEIMEYTSPDEVAVCNLASIALPMFV--------------------KNGSF 459
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D ++L +VT VT NLNK+ID NYYPV+ A SN+RHRPIG+GVQGLAD FI+L +PF S
Sbjct: 460 DHKELFKVTKRVTRNLNKVIDRNYYPVKEAENSNMRHRPIGLGVQGLADAFIMLRLPFTS 519
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP---SDR 597
EA++LN++IFET+Y+ A+ S E+A EGPY T+ GSP+S+G Q ++WGV S R
Sbjct: 520 DEAKKLNQEIFETLYFAAVTASMEMAKEEGPYSTFEGSPISQGEFQHNLWGVKDEELSGR 579
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWEKLRKEVKKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
KHLL DL +GLW+ +K +++ +GS+Q I IP++++ +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLEDLVNLGLWNENMKQELMRANGSIQHIETIPQDIRDLYKTVWELSMKDIIDMSRQR 699
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
G +ID SQSLN+ M+ N+ KLTS+HF+AW GLKTGMYYLR++AA DAIKFT+D S K
Sbjct: 700 GYFIDQSQSLNLFMENANYAKLTSMHFYAWKSGLKTGMYYLRTKAAVDAIKFTLDNSKKK 759
Query: 778 ENP 780
P
Sbjct: 760 AAP 762
>gi|393229615|gb|EJD37235.1| hypothetical protein AURDEDRAFT_147076 [Auricularia delicata
TFB-10046 SS5]
Length = 860
Score = 1101 bits (2848), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/769 (66%), Positives = 619/769 (80%), Gaps = 20/769 (2%)
Query: 10 QEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTT 69
+E V FDKITAR+ KL YGL ++H DP+ +++KV +GVY+GVTT +LD LAAETAA +TT
Sbjct: 21 KERVQFDKITARIAKLCYGLDMDHVDPIEITKKVISGVYQGVTTVELDNLAAETAAYLTT 80
Query: 70 NHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAA 129
HPDYA LAARI +SNLHK TKK+FS+ I+D+Y + N ++G A LI+++ Y ++ +NA
Sbjct: 81 KHPDYAILAARIAISNLHKETKKNFSQVIEDLYRYVNPKNGKAAGLISEETYQVVKENAE 140
Query: 130 RLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAIKT 189
LDS IIYDRDF+Y YFGFKTLERSYLL++ G+V ERPQHM+MRVAVGIH DI+ AI+T
Sbjct: 141 LLDSAIIYDRDFNYQYFGFKTLERSYLLRLNGRVAERPQHMIMRVAVGIHGRDIERAIQT 200
Query: 190 YHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIG 249
Y++MS+R+FTHASPTLF AGTPR QLSSCFLV MKDDSIEGIYDTLK CA+ISKSAGGIG
Sbjct: 201 YNLMSERYFTHASPTLFAAGTPRPQLSSCFLVAMKDDSIEGIYDTLKACAMISKSAGGIG 260
Query: 250 VSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIF 309
+++HNIRA GSYI GTNG SNG+VPMLR F+ TARYVDQGG KR GAFA+YLEPWH D+F
Sbjct: 261 LNIHNIRAKGSYIAGTNGVSNGLVPMLRAFDSTARYVDQGGNKRPGAFAIYLEPWHPDVF 320
Query: 310 EFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFER 369
EFLDLRKNHGKEE RARDLFYALW+PDLFM+RV++NG WSLFCPNEAPGL + EFE
Sbjct: 321 EFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVEANGEWSLFCPNEAPGLHEVHSAEFEA 380
Query: 370 LYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLC 429
LY +YEKEG+A+K + AQ LW+ IL++QIETG P+ML+KD N KSNQQNLGTIKSSNLC
Sbjct: 381 LYERYEKEGRARKTIPAQKLWYAILEAQIETGGPFMLYKDAANAKSNQQNLGTIKSSNLC 440
Query: 430 TEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVT 489
TE+I+Y+SP ETAVCNLASIALP ++ N +DF+KL ++
Sbjct: 441 TEIIEYSSPDETAVCNLASIALPSFI--------------------SNGKYDFQKLHDIA 480
Query: 490 GIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKD 549
IV NLN+IIDVNYYPV ARRSN+RHRPIGIGVQGLAD F+ L +PFD EA++LN
Sbjct: 481 KIVAFNLNRIIDVNYYPVPEARRSNMRHRPIGIGVQGLADAFMALRLPFDGPEARKLNLQ 540
Query: 550 IFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISK 609
IFETIY+ AL SSE+A +GPYET+ GSP +G LQ D+WGV P+D WDW L++ I++
Sbjct: 541 IFETIYHAALEASSEMAEADGPYETWEGSPAQQGKLQYDLWGVTPTDLWDWASLKERIAR 600
Query: 610 NGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGL 669
G+RNSLL+APMPTA TSQILG NECFEPYTSNIY+RRVL+GEF +V LL +L +GL
Sbjct: 601 TGLRNSLLLAPMPTAGTSQILGFNECFEPYTSNIYTRRVLAGEFQIVCPWLLKELVALGL 660
Query: 670 WSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNI 729
W +KN II + GSVQ IP IP+++KAIYKTVWEI QK ++D+A DRG +I SQSLN+
Sbjct: 661 WDDRMKNMIIANGGSVQNIPGIPDDVKAIYKTVWEISQKKVLDLAADRGAFICQSQSLNV 720
Query: 730 HMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE 778
H+ P G+LTS+HF+ W +GLKTGMYYLR+R AA AI+FTVD SVLKE
Sbjct: 721 HLQSPTTGQLTSMHFYGWKKGLKTGMYYLRTRPAAQAIQFTVDQSVLKE 769
>gi|255710753|ref|XP_002551660.1| KLTH0A04686p [Lachancea thermotolerans]
gi|238933037|emb|CAR21218.1| KLTH0A04686p [Lachancea thermotolerans CBS 6340]
Length = 879
Score = 1101 bits (2848), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/775 (63%), Positives = 634/775 (81%), Gaps = 14/775 (1%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG++E V FDKITAR+ +L YGL H D V ++Q++ +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRREPVKFDKITARVSRLCYGLDPNHVDAVKITQRIISGVYEGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AET A MTT HPDYA+LAARI +SNLHK T K FS+ + D++++ N ++G+ +P+I+ +V
Sbjct: 61 AETCAYMTTIHPDYATLAARIAISNLHKQTTKQFSQVVSDLFHYVNPKNGIHSPMISQEV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+DII K+ L+S I+YDRDF Y+YFGFKTLERSYLL++ G+V ERPQH++MRVAVGIH
Sbjct: 121 FDIIQKHKDELNSAIVYDRDFQYNYFGFKTLERSYLLRINGEVAERPQHLIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D+I I+TY++MS ++FTHASPTLFNAGTP Q+SSCFLV MKDDSIEGIYDTLKECA+
Sbjct: 181 DNIPKVIETYNLMSLKYFTHASPTLFNAGTPHPQMSSCFLVAMKDDSIEGIYDTLKECAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DIF+F+D+RKNHGKEE RARDLF ALWVPDLFM+RVQ NG W+LF P+EAPGL+
Sbjct: 301 LEPWHSDIFDFVDIRKNHGKEEIRARDLFPALWVPDLFMKRVQENGDWTLFSPSEAPGLS 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LY +Y +EG+ +K ++AQ LW+ IL++Q ETGTP+ML+KD CN+KSNQ+NL
Sbjct: 361 DVYGDEFEALYERYVQEGRGRKTIKAQKLWYAILEAQTETGTPFMLYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G IKSSNLC E+++Y++P ETAVCNLAS++LP ++ S + +++
Sbjct: 421 GVIKSSNLCCEIVEYSAPDETAVCNLASLSLPAFIET--------------SEDGQTQWY 466
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+F+KL E+ +VT NLN++ID NYYPVE+AR SN+RHRP+ +GVQGLAD F++L +PFDS
Sbjct: 467 NFDKLHEIAKVVTHNLNQVIDRNYYPVESARNSNMRHRPVALGVQGLADAFMILRIPFDS 526
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LN IFETIY+ AL S+E+A GPYET+ GSP S+GILQ DMW P+D WDW
Sbjct: 527 QEAKELNIQIFETIYHAALERSNELAVEHGPYETFEGSPASQGILQFDMWDKKPTDLWDW 586
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I K G+RNSLL+APMPTASTSQILGNNECFEPYTSN+YSRRVLSGEF +VN +L
Sbjct: 587 ETLKAKIVKTGLRNSLLLAPMPTASTSQILGNNECFEPYTSNMYSRRVLSGEFQIVNPYL 646
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W+ +K+ II D+GS+Q +P IP++LK +YKTVWE+ QKT+++MA DR CY
Sbjct: 647 LRDLVDLGIWNDAMKSHIISDNGSIQNLPNIPQKLKDLYKTVWELSQKTIIEMAADRACY 706
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
ID SQSLN+H+ P GKLTS+HF+ W +GLKTGMYYLR++AA+ AI+FT+D SV
Sbjct: 707 IDQSQSLNVHIRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDKSV 761
>gi|120437795|ref|YP_863481.1| ribonucleoside-diphosphate reductase large chain [Gramella forsetii
KT0803]
gi|117579945|emb|CAL68414.1| ribonucleoside-diphosphate reductase large chain [Gramella forsetii
KT0803]
Length = 819
Score = 1101 bits (2847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/795 (64%), Positives = 636/795 (80%), Gaps = 24/795 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDG++E V FDKITAR+KKL YGL+ E DPV V+ +V G+Y VTTS+LD LA
Sbjct: 1 MYVVKRDGRKEPVMFDKITARVKKLCYGLN-ELVDPVKVAMRVIEGLYDNVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA MTT+HPDYA LAARI VSNLHKNTKK+FSE + D+Y + N R+G KAPL++D+V
Sbjct: 60 AEIAATMTTSHPDYAKLAARISVSNLHKNTKKTFSEVMTDLYEYVNPRTGEKAPLLSDEV 119
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y +I++N +LDS IIY+RDF YDYFGFKTLERSYLLK+ GK+ ERPQHMLMRV++GIH
Sbjct: 120 YKVIIENKEKLDSTIIYNRDFSYDYFGFKTLERSYLLKLNGKIAERPQHMLMRVSIGIHI 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD+D+AI+TY +MS+++FTHA+PTLFN+GTP+ Q+SSCFL+ MKDDSI+GIYDTLK+ A
Sbjct: 180 DDLDAAIETYELMSKKYFTHATPTLFNSGTPKPQMSSCFLLTMKDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYI GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYISGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAMY 299
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWHADIF+FLDL+KNHGKEE RARDLFYA+W+PDLFM+RV+ N W+L CP E PGL
Sbjct: 300 VEPWHADIFDFLDLKKNHGKEEMRARDLFYAMWMPDLFMKRVEQNEKWTLMCPQECPGLF 359
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE+LY KYE E K +K ++A+ LW +I +SQIETGTPYML+KD N+KSNQ+NL
Sbjct: 360 DTYGEEFEKLYEKYEAENKGRKTIKARELWEKITESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++YTSP E AVCNLASIALP ++ K F
Sbjct: 420 GTIRSSNLCTEILEYTSPDEVAVCNLASIALPMFI--------------------KGNEF 459
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D ++L ++T VT+NLNK+ID NYYPV+ A SN+RHRP+G+GVQGLADTFI L MPF S
Sbjct: 460 DHKELFKITKRVTKNLNKVIDRNYYPVKEAENSNMRHRPVGLGVQGLADTFIKLRMPFTS 519
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSD---R 597
+A++LN++IFET+Y+ A+ S E+A EGPY T+ GSP+S+G Q ++WG+ D R
Sbjct: 520 DKAKKLNQEIFETLYFAAVTASMELAKEEGPYSTFKGSPISEGEFQYNLWGIKDEDLSGR 579
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDWG LR + K GVRNSLL+APMPTASTSQILGNNE FEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWGKLRKQVMKEGVRNSLLLAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
KHLL DL LW +KN I+ ++GSVQ I IP++LK +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLEDLVSRNLWDDEVKNAIMRNNGSVQDIDIIPDDLKELYKTVWELSMKDIIDMSRHR 699
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
G +ID SQSLN+ M+ N+ KLTS+HF+AW GLKTGMYYLR+++A DAIKFT++ K
Sbjct: 700 GYFIDQSQSLNLFMENANYSKLTSMHFYAWKSGLKTGMYYLRTKSAVDAIKFTLEKEKKK 759
Query: 778 ENPKVTDDDDAKMAQ 792
E + AK A+
Sbjct: 760 EPIVAVSEAPAKAAE 774
>gi|388582671|gb|EIM22975.1| hypothetical protein WALSEDRAFT_31633 [Wallemia sebi CBS 633.66]
Length = 888
Score = 1100 bits (2846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 515/804 (64%), Positives = 627/804 (77%), Gaps = 21/804 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V KRDG++E+V FDKITAR+ KL YGL H DP+ +++KV GV++G+TT +LD LA
Sbjct: 4 MTVFKRDGRKESVAFDKITARINKLCYGLDSNHVDPIEITKKVVQGVHQGITTVELDNLA 63
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +T HPDYA LAARI +SNLHK TKK+FS I+D+YN+ N R+G P+I+D+
Sbjct: 64 AETAAYLTVKHPDYAVLAARIAISNLHKETKKAFSAVIEDLYNYVNPRNGKPGPMISDET 123
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y I+MKN LDS I+YDRDF+Y++FGFKTLERSYLL++ GKV ERPQHMLMRVAVGIH
Sbjct: 124 YQIVMKNRNVLDSAILYDRDFNYNFFGFKTLERSYLLRINGKVAERPQHMLMRVAVGIHG 183
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D++ I+TY++MS + FTHASPTLFNAGTP Q+SSCFLV M+DDSIEGIYDTLK CA+
Sbjct: 184 SDLERVIETYNLMSLKAFTHASPTLFNAGTPHPQMSSCFLVTMQDDSIEGIYDTLKSCAL 243
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+++H IRATGSYI GTNG+SNGIVPMLR F+ TARYVDQGG KR GAFA+Y
Sbjct: 244 ISKTAGGIGLNIHCIRATGSYIAGTNGSSNGIVPMLRAFDATARYVDQGGNKRPGAFAIY 303
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH D+FEFLDLRKNHGKEE RARDLFYALW+PDLFM+RVQ NG W LFCP+EAPGL
Sbjct: 304 LEPWHPDVFEFLDLRKNHGKEEVRARDLFYALWIPDLFMQRVQENGDWPLFCPHEAPGLH 363
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE L+ KYE+EG+AK+VV+AQ LW+ IL SQ+ETG P+ML+KD N KSNQQNL
Sbjct: 364 EVWGKEFEELFFKYEREGRAKRVVKAQKLWYSILDSQVETGGPFMLYKDHANAKSNQQNL 423
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK+SNLCTE+I+Y++P E AVCNLASIALP Y+ KN F
Sbjct: 424 GTIKNSNLCTEIIEYSAPDEVAVCNLASIALPSYI--------------------KNGQF 463
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF +L +VT ++T NLN+IIDVNYYPV+ A SN+RHRPIG+GVQGLAD F LL PF S
Sbjct: 464 DFNELHKVTKVLTRNLNRIIDVNYYPVKEAYNSNMRHRPIGLGVQGLADAFQLLRFPFSS 523
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+ LNK IFETIY+ A+ +SSE+A G YE+YHGSP SKG LQ D+W V P+ WDW
Sbjct: 524 EEARLLNKQIFETIYHAAVESSSELAQEFGVYESYHGSPASKGQLQYDLWNVTPTGLWDW 583
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ +++ G+RNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVLSGEF +VN L
Sbjct: 584 TSLKEKVAQRGLRNSLLVAPMPTASTSQILGFNECFEPYTSNIYTRRVLSGEFQIVNPWL 643
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL + GLW+ +KN+II GSVQ I IP+++K +YKTVWEI QK ++D+A DRG +
Sbjct: 644 LKDLCDRGLWNDTMKNRIIAHGGSVQNISDIPDDIKELYKTVWEISQKVIIDLAADRGAF 703
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLN+H+ P +LTS+HF+A RGLKTGMYYLR+R + AI+FTVD L+E
Sbjct: 704 IDQSQSLNVHLASPTHAQLTSMHFYAHRRGLKTGMYYLRTRPQSAAIQFTVDKQALEE-A 762
Query: 781 KVTDDDDAKMAQMVCSLTNREECM 804
K T S+T+ E M
Sbjct: 763 KATQKSKPSTPSKTGSITSSVERM 786
>gi|325286575|ref|YP_004262365.1| ribonucleoside-diphosphate reductase subunit alpha [Cellulophaga
lytica DSM 7489]
gi|324322029|gb|ADY29494.1| ribonucleoside-diphosphate reductase, alpha subunit [Cellulophaga
lytica DSM 7489]
Length = 825
Score = 1100 bits (2846), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/785 (65%), Positives = 633/785 (80%), Gaps = 24/785 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDG++E + FDKITAR++KL YGL+ DP+ V+ +V G+Y GVTTS+LD LA
Sbjct: 1 MYVVKRDGRKELIMFDKITARVRKLCYGLNA-LVDPLKVAMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA MTT HPDYA LAARI VSNLHKNTKKSFSE +KD+Y + N R+G KAPL++D+V
Sbjct: 60 AEIAATMTTTHPDYAKLAARISVSNLHKNTKKSFSEVMKDLYEYVNPRTGKKAPLLSDEV 119
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+ +I N+ +LDS IIY+RDF YDYFGFKTLERSYLLK+ GK+ ERPQHMLMRV++GIH
Sbjct: 120 FKVIQDNSEKLDSTIIYNRDFGYDYFGFKTLERSYLLKLNGKIAERPQHMLMRVSIGIHL 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+D+D+AI+TY +MS+++FTHA+PTLFN+GTP+ Q+SSCFL+ M+DDSI+GIYDTLK+ A
Sbjct: 180 NDLDAAIETYELMSKKYFTHATPTLFNSGTPKPQMSSCFLLAMQDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYI GTNGTSNG+VPMLRV+NDTARYVDQGGGKRKG+FAVY
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIAGTNGTSNGVVPMLRVYNDTARYVDQGGGKRKGSFAVY 299
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWHADIFEFLDL+KNHGKEE RARDLFYA+W+PDLFM+RV++N W+L CPNE P L
Sbjct: 300 VEPWHADIFEFLDLKKNHGKEEMRARDLFYAMWIPDLFMQRVEANADWTLMCPNECPDLY 359
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
EFE Y +E EGK +K ++A++LW +IL+SQIETGTPYML+KD N+KSNQ+NL
Sbjct: 360 KKHDKEFEEAYLAFEAEGKGRKTIKARDLWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++YT+P E AVCNLASIALP +V KN F
Sbjct: 420 GTIRSSNLCTEIMEYTAPDEVAVCNLASIALPMFV--------------------KNGEF 459
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D ++L VT VT NLN +ID NYYPV A SN+RHRPIG+GVQGLAD FI++ MPF S
Sbjct: 460 DHKELFRVTKRVTRNLNTVIDRNYYPVVEAENSNMRHRPIGLGVQGLADAFIMMRMPFTS 519
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP---SDR 597
EA++LN++IFET+YY A+ S E+A +GPY +Y GSP+SKG Q ++WG+ S R
Sbjct: 520 DEAKKLNQEIFETLYYAAVTASMEMAKEDGPYSSYEGSPISKGDFQHNLWGIKDDELSGR 579
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWEKLRKSVLKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
KHLL DL ++GLW+ +K +++ +GS+Q I IPE++K +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLEDLVQLGLWNESLKQELMRANGSIQHIDIIPEDIKELYKTVWELSMKDIIDMSRHR 699
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
G +ID SQSLN+ M+ N+ KLTS+HF+AW GLKTGMYYLR++AAADAIKFTVD S K
Sbjct: 700 GYFIDQSQSLNLFMENANYSKLTSMHFYAWKSGLKTGMYYLRTKAAADAIKFTVDNSKKK 759
Query: 778 ENPKV 782
E P V
Sbjct: 760 EKPVV 764
>gi|296421726|ref|XP_002840415.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636631|emb|CAZ84606.1| unnamed protein product [Tuber melanosporum]
Length = 884
Score = 1100 bits (2845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/778 (65%), Positives = 626/778 (80%), Gaps = 22/778 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRD ++E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MYVVKRDNRKERVQFDKITARVSRLCYGLDSEHVDAATITQKVISGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK FS+ I D+Y++ N ++G A +I+ +
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSQVISDLYHYVNPKNGRPASMISTET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+ +M++A+ LDS IIYD+DF+Y+YFGFKTLERSYLL++ GKV ERPQHMLMRVAVGIH
Sbjct: 121 YETVMRHASELDSAIIYDKDFNYNYFGFKTLERSYLLRINGKVAERPQHMLMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+D+D I+TY++ S ++FTHASPTLFNAGTP QLSSCFLV MK DSI+GIYDTLK CA+
Sbjct: 181 EDVDKVIETYNLTSSKYFTHASPTLFNAGTPSPQLSSCFLVTMKGDSIDGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+++H IRATGSYI GTNG+SNGIVPMLRVFN TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNIHCIRATGSYIAGTNGSSNGIVPMLRVFNHTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWHADIF+F+DLRKNHGKEE RARDLFYALW+PDLFM+RV++N WSLFCPNEAPGLA
Sbjct: 301 MEPWHADIFDFIDLRKNHGKEEVRARDLFYALWIPDLFMKRVEANAEWSLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEK-EGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQN 419
D WG EFE LY KYE + A+K ++AQ LW+ IL++Q ETG P+ML+KD CN+KSNQQN
Sbjct: 361 DVWGEEFEALYNKYENTKDLARKTIKAQKLWYHILEAQTETGNPFMLYKDACNRKSNQQN 420
Query: 420 LGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRY 479
LGTI+SSNLCTE+++Y++P E AVCNLAS+ALP YV RG
Sbjct: 421 LGTIRSSNLCTEIVEYSAPDEVAVCNLASLALPTYVDV--------------QRGE---- 462
Query: 480 FDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFD 539
+DF KL EVT +V +NLNKIIDVN+YPV AR+SN RHRP+G+GVQGLAD F+ L MPF+
Sbjct: 463 YDFAKLHEVTKVVIKNLNKIIDVNFYPVPEARKSNTRHRPVGVGVQGLADAFLALRMPFE 522
Query: 540 STEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWD 599
S +A+QLN IFETIY+ A+ S+E+A +GPY TY GSP SKG LQ D+W V P++ WD
Sbjct: 523 SPQAKQLNIQIFETIYHAAVEASTELAEIQGPYPTYEGSPASKGQLQYDLWNVTPTELWD 582
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L++ + K+G+RNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF +VN
Sbjct: 583 WDELKEKVKKHGLRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQIVNPW 642
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL DL +MGLWS +KN+II ++GS+Q IP IP+++KA+YKTVWEI QK ++++ G
Sbjct: 643 LLKDLVDMGLWSDNMKNRIIAENGSIQNIPNIPDDIKALYKTVWEISQKKVIEVC---GA 699
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
+ID SQSLNIH+ P GKLTS+HF+ W GLKTGMYYLR++AAA AI+FTVD LK
Sbjct: 700 FIDQSQSLNIHIQNPTMGKLTSMHFYGWRLGLKTGMYYLRTQAAAAAIQFTVDQEALK 757
>gi|68481362|ref|XP_715320.1| hypothetical protein CaO19.5779 [Candida albicans SC5314]
gi|68481493|ref|XP_715255.1| hypothetical protein CaO19.13201 [Candida albicans SC5314]
gi|7271006|emb|CAB77640.1| ribonucleotide reductase large subunit [Candida albicans]
gi|46436871|gb|EAK96226.1| hypothetical protein CaO19.13201 [Candida albicans SC5314]
gi|46436939|gb|EAK96293.1| hypothetical protein CaO19.5779 [Candida albicans SC5314]
Length = 854
Score = 1100 bits (2845), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/775 (64%), Positives = 630/775 (81%), Gaps = 16/775 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG++E V FDKITAR+++L YGL+ H +PV ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEPVRFDKITARVQRLCYGLNPNHVEPVAITQKVISGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA MTT HPDYA LAARI VSNLHK T K +S+ KD+Y + N ++GL +P+I+ +
Sbjct: 61 AEIAATMTTIHPDYAVLAARIAVSNLHKQTTKQYSKVSKDLYEYINPKTGLHSPMISKET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YDIIM++ L+S I+YDRDF+Y+YFGFKTLERSYLL++ GKV ERPQH++MRVAVGIH
Sbjct: 121 YDIIMEHEDELNSAIVYDRDFNYNYFGFKTLERSYLLRINGKVAERPQHLIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI I+TY++MSQR+FTH SP LFNAGTPR Q+SSCFL+ MKDDSIEGIYDTLK CA+
Sbjct: 181 NDIPRVIETYNLMSQRFFTHGSPCLFNAGTPRPQMSSCFLLAMKDDSIEGIYDTLKSCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+ +HNIR+TG+YI GTNGTSNGI+PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLHIHNIRSTGAYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DIF+F+D+RKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF PNEAPGLA
Sbjct: 301 LEPWHSDIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNGDWTLFSPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LYTKYEKE + ++ ++AQ LW+ IL +Q ETGTP+ML+KD+CN KSNQ+NL
Sbjct: 361 DVYGDEFEELYTKYEKENRGRQTIKAQKLWYAILGAQTETGTPFMLYKDSCNNKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G IKSSNLC E+++Y++P E AVCNLASIALP +V K+ ++
Sbjct: 421 GIIKSSNLCCEIVEYSAPDEVAVCNLASIALPSFVE----------------NDEKSTWY 464
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+F+KL +VT +VT NLN++ID N+YPV A RSN+RHRPI +GVQGLAD F+ L +PFDS
Sbjct: 465 NFDKLHQVTKVVTRNLNRVIDRNHYPVPEAERSNMRHRPIALGVQGLADAFMELRLPFDS 524
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LN IFETIY+ A+ S E+A EG YETY GSP S+G+LQ D+W P++ WDW
Sbjct: 525 QEARELNIQIFETIYHAAVEASIELAKEEGAYETYPGSPASQGLLQFDLWNRKPTELWDW 584
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ ++K+G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL+GEF +VN +L
Sbjct: 585 DTLKQDLAKHGMRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQIVNPYL 644
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W+ +K+ II ++GS+Q +P IP+E+KA+YKTVWEI QK ++DMA DR +
Sbjct: 645 LKDLVDLGVWNDAMKSSIIANNGSIQALPNIPDEIKALYKTVWEISQKHIIDMAADRAAF 704
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
ID SQSLNIH+ P GKLTS+HF+ W +GLKTGMYYLR++AA+ AI+FT+D +
Sbjct: 705 IDQSQSLNIHIKDPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQKI 759
>gi|241951096|ref|XP_002418270.1| ribonucleoside-diphosphate reductase large chain 1, putative;
ribonucleotide reductase large subunit 1, putative;
ribonucleotide reductase r1 subunit 1, putative [Candida
dubliniensis CD36]
gi|223641609|emb|CAX43570.1| ribonucleoside-diphosphate reductase large chain 1, putative
[Candida dubliniensis CD36]
Length = 854
Score = 1100 bits (2844), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/777 (64%), Positives = 633/777 (81%), Gaps = 16/777 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG++E V FDKITAR+++L YGL+ H +PV ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEPVRFDKITARVQRLCYGLNPNHVEPVAITQKVISGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA MTT HPDYA LAARI VSNLHK T K +S+ KD+Y + N ++GL +P+I+ +
Sbjct: 61 AEIAATMTTIHPDYAVLAARIAVSNLHKQTTKQYSKVSKDLYEYINPKTGLHSPMISKET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YDIIM++ L+S I+YDRDF Y+YFGFKTLERSYLL++ GKV ERPQH++MRVAVGIH
Sbjct: 121 YDIIMEHEDELNSAIVYDRDFSYNYFGFKTLERSYLLRINGKVAERPQHLIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI I+TY++MSQR+FTH SP LFNAGTPR Q+SSCFL+ MKDDSIEGIYDTLK CA+
Sbjct: 181 NDIPRVIETYNLMSQRFFTHGSPCLFNAGTPRPQMSSCFLLAMKDDSIEGIYDTLKSCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+ +HNIR+TG+YI GTNGTSNGI+PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLHIHNIRSTGAYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DIF+F+D+RKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF PNEAPGLA
Sbjct: 301 LEPWHSDIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNGDWTLFSPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LYT+YEKE + ++ ++AQ LW+ IL +Q ETGTP+ML+KD+CN KSNQ+NL
Sbjct: 361 DVYGDEFEELYTRYEKENRGRQTIKAQKLWYAILGAQTETGTPFMLYKDSCNNKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G IKSSNLC E+++Y++P E AVCNLASIALP +V ES S N ++
Sbjct: 421 GIIKSSNLCCEIVEYSAPDEVAVCNLASIALPSFV-------ESDQS---------NTWY 464
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+F+KL +VT +VT NLN++ID N+YPV A RSN+RHRPI +GVQGLAD F+ L +PFDS
Sbjct: 465 NFDKLHDVTKVVTRNLNRVIDRNHYPVPEAERSNMRHRPIALGVQGLADAFMELRLPFDS 524
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LN IFETIY+ A+ S E+A EG YETY GSP S+G+LQ D+W P++ WDW
Sbjct: 525 QEARELNIQIFETIYHAAVEASVELAKEEGAYETYPGSPASQGLLQFDLWNRKPTELWDW 584
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ ++K+G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL+GEF +VN +L
Sbjct: 585 DTLKQNLAKHGMRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQIVNPYL 644
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W+ +K+ II ++GS+Q +P IP+E+KA+YKTVWEI QK ++DMA DR +
Sbjct: 645 LKDLVDLGVWNDAMKSSIIANNGSIQALPNIPDEIKALYKTVWEISQKHIIDMAADRAAF 704
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
ID SQSLNIH+ P GKLTS+HF+ W +GLKTGMYYLR++AA+ AI+FT+D +++
Sbjct: 705 IDQSQSLNIHIKDPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQKIVE 761
>gi|238882110|gb|EEQ45748.1| ribonucleoside-diphosphate reductase large chain [Candida albicans
WO-1]
Length = 854
Score = 1100 bits (2844), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/775 (64%), Positives = 630/775 (81%), Gaps = 16/775 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG++E V FDKITAR+++L YGL+ H +PV ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEPVRFDKITARVQRLCYGLNPNHVEPVAITQKVISGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA MTT HPDYA LAARI VSNLHK T K +S+ KD+Y + N ++GL +P+I+ +
Sbjct: 61 AEIAATMTTIHPDYAVLAARIAVSNLHKQTTKQYSKVSKDLYEYINPKTGLHSPMISKET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YDIIM++ L+S I+YDRDF+Y+YFGFKTLERSYLL++ GKV ERPQH++MRVAVGIH
Sbjct: 121 YDIIMEHEDELNSAIVYDRDFNYNYFGFKTLERSYLLRINGKVAERPQHLIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI I+TY++MSQR+FTH SP LFNAGTPR Q+SSCFL+ MKDDSIEGIYDTLK CA+
Sbjct: 181 NDIPRVIETYNLMSQRFFTHGSPCLFNAGTPRPQMSSCFLLAMKDDSIEGIYDTLKSCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+ +HNIR+TG+YI GTNGTSNGI+PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLHIHNIRSTGAYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DIF+F+D+RKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF PNEAPGLA
Sbjct: 301 LEPWHSDIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNGDWTLFSPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LYTKYEKE + ++ ++AQ LW+ IL +Q ETGTP+ML+KD+CN KSNQ+NL
Sbjct: 361 DVYGDEFEELYTKYEKENRGRQTIKAQKLWYAILGAQTETGTPFMLYKDSCNNKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G IKSSNLC E+++Y++P E AVCNLASIALP +V K+ ++
Sbjct: 421 GIIKSSNLCCEIVEYSAPDEVAVCNLASIALPSFVE----------------NDEKSTWY 464
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+F+KL +VT +VT NLN++ID N+YPV A RSN+RHRPI +GVQGLAD F+ L +PFDS
Sbjct: 465 NFDKLHQVTKVVTRNLNRVIDRNHYPVPEAERSNMRHRPIALGVQGLADAFMELRLPFDS 524
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LN IFETIY+ A+ S E+A EG YETY GSP S+G+LQ D+W P++ WDW
Sbjct: 525 QEARELNIQIFETIYHAAVEASIELAKEEGAYETYPGSPASQGLLQFDLWNRKPTELWDW 584
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ ++K+G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL+GEF +VN +L
Sbjct: 585 DTLKQDLAKHGMRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQIVNPYL 644
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W+ +K+ II ++GS+Q +P IP+E+KA+YKTVWEI QK ++DMA DR +
Sbjct: 645 LKDLVDLGVWNDAMKSSIIANNGSIQALPNIPDEIKALYKTVWEISQKHIIDMAADRAAF 704
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
ID SQSLNIH+ P GKLTS+HF+ W +GLKTGMYYLR++AA+ AI+FT+D +
Sbjct: 705 IDQSQSLNIHIKDPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQKI 759
>gi|395802145|ref|ZP_10481398.1| ribonucleoside-diphosphate reductase subunit alpha [Flavobacterium
sp. F52]
gi|395435386|gb|EJG01327.1| ribonucleoside-diphosphate reductase subunit alpha [Flavobacterium
sp. F52]
Length = 797
Score = 1100 bits (2844), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/818 (63%), Positives = 642/818 (78%), Gaps = 31/818 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDG +E V FDKIT R+KKL YGL+ E DPV V+ +V G+Y GV+TS+LD LA
Sbjct: 1 MYVVKRDGHREPVMFDKITERIKKLCYGLN-ELVDPVKVAMRVIEGLYDGVSTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA+MT HPDYA LAAR+ +SNLH NTKKSFSET+KDMY++ N R+G APLIADDV
Sbjct: 60 AETAASMTIAHPDYAQLAARVAISNLHSNTKKSFSETMKDMYHYVNPRNGQDAPLIADDV 119
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y +I +NAA LDS IIY RDF+YDYFGFKTLERSYLLK+ GK+VERPQHMLMRV+VGIH
Sbjct: 120 YKVIQENAAFLDSHIIYTRDFNYDYFGFKTLERSYLLKINGKIVERPQHMLMRVSVGIHL 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD+ S I+TY +MS+++FTHA+PTLFNAGTP+ Q+SSCFL+ M++DSI+GIYDTLK+ A
Sbjct: 180 DDLKSVIETYDLMSKKFFTHATPTLFNAGTPKPQMSSCFLLAMQEDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+E WHADIF+FLDL+KNHGKEE RARDLF+A+W DLFM+RVQ +G W+L CPNE PGL
Sbjct: 300 IETWHADIFDFLDLKKNHGKEEMRARDLFFAMWTSDLFMKRVQEDGPWTLMCPNECPGLY 359
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LYT YE +GK +K ++A+ LW +IL+SQIETGTPYML+KD N+KSN +NL
Sbjct: 360 DVYGDEFEALYTGYEAQGKGRKTIRARELWEKILESQIETGTPYMLYKDAANRKSNHKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE++++TS E AVCNLASI+LP +V +N F
Sbjct: 420 GTIRSSNLCTEIMEFTSKDEIAVCNLASISLPMFV--------------------ENGEF 459
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+ E L VT VT NLNK+ID NYYPV+ A SN+RHRP+G+GVQGLAD FI+L MPF S
Sbjct: 460 NHESLYNVTKRVTRNLNKVIDRNYYPVQEAENSNMRHRPVGLGVQGLADAFIMLRMPFTS 519
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP---SDR 597
EA++LN++IFET+Y+ A+ S E+A EGPY T+ GSP+SKG Q +MWG+ S R
Sbjct: 520 DEAKKLNQEIFETLYFAAVTASMEMAKEEGPYSTFEGSPMSKGEFQYNMWGLKDEELSGR 579
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + ++GVRNSLLVAPMPTASTSQILGNNE FEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWASLRKEVMEHGVRNSLLVAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
KHLL DL ++GLW+ +K +I+ +GSVQ I IP++LK +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLEDLVKLGLWNEDLKQEIMRHNGSVQNINIIPQDLKDLYKTVWEMSMKDIIDMSRQR 699
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
G +ID SQSLN+ M N+ KLTS+HF+AW GLKTGMYYLR++AA DAIKFT++ +
Sbjct: 700 GYFIDQSQSLNLFMQDANYSKLTSMHFYAWQSGLKTGMYYLRTKAAVDAIKFTLNNDKKQ 759
Query: 778 EN-PKVTDD------DDAKMAQMVCSLTNREECMACGS 808
E P + +D K + + E+C CGS
Sbjct: 760 ETAPSLVQKTESISVEDYKAMLLKAQAADPEDCEMCGS 797
>gi|398389296|ref|XP_003848109.1| hypothetical protein MYCGRDRAFT_101786 [Zymoseptoria tritici
IPO323]
gi|339467983|gb|EGP83085.1| hypothetical protein MYCGRDRAFT_101786 [Zymoseptoria tritici
IPO323]
Length = 916
Score = 1099 bits (2843), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/777 (66%), Positives = 626/777 (80%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG++E V FDKITAR+ +L YGL EH D ++ KV +GVY+GVTT QLD+LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDSAAITMKVISGVYQGVTTIQLDDLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA LAARI VSNLHK TKK FS + D+Y++ N ++ AP+I+D+
Sbjct: 61 AETAAYMTVTHPDYAILAARIAVSNLHKQTKKQFSAVVSDLYHYINPKTNKAAPMISDET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y +MK+A L+S I+YDRDF+Y YFGFKTLERSYLL++ GKV ERPQ M+MRVAVGIH
Sbjct: 121 YATVMKHADELNSAIVYDRDFNYQYFGFKTLERSYLLRINGKVAERPQQMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI+SAI+TY+ MS ++FTHASPTLF+AGTP AQL+SCFL+ MKDDSI+GIYDTLK CA+
Sbjct: 181 EDIESAIETYNYMSNKYFTHASPTLFSAGTPNAQLASCFLIDMKDDSIDGIYDTLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRATG+YI GTNGTSNG+VPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKNAGGIGLNVHRIRATGAYISGTNGTSNGLVPMLRVFNNTARYVDQGGNKRPGAFAMY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWHAD+F FLDLRKNHGKEE RARDLFY LWVPDLFM+RV+ N W+L CP+E PGLA
Sbjct: 301 IEPWHADVFSFLDLRKNHGKEEVRARDLFYGLWVPDLFMKRVEQNTTWTLMCPHECPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LY +YE+EGK ++ V+AQ LW+ IL++Q ETGTPY+L+KD N KSNQ+NL
Sbjct: 361 DVYGAEFEELYERYEREGKGRETVRAQKLWYAILEAQTETGTPYILYKDAANSKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+I+YT+P E AVCNLAS+ALP YV +N F
Sbjct: 421 GTIRSSNLCTEIIEYTAPDEVAVCNLASLALPTYV------------------DIENERF 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DFEKL +VT VT+NLNKII+VN+YPV AR+SN RHRPIG+GV GLAD F+ L MPFDS
Sbjct: 463 DFEKLHQVTQTVTKNLNKIIEVNHYPVPEARKSNFRHRPIGLGVNGLADAFLALRMPFDS 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+QLN IFETIY+ AL S ++AA+ GPYETY GSPVSKG LQ DMWGV P+D WDW
Sbjct: 523 PEARQLNIQIFETIYHAALTASCDLAAKLGPYETYEGSPVSKGELQYDMWGVTPTDLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+++GVRNSLLVAPMPTASTSQI+G NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 583 AALKAKIAEHGVRNSLLVAPMPTASTSQIMGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL E GLWS +KN+II D GS+Q+IP IP++LKA+YKTVWEI Q+ +V M+ DRG +
Sbjct: 643 LKDLVERGLWSDNMKNRIIADGGSIQRIPNIPDDLKALYKTVWEISQRHIVQMSADRGAF 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
ID SQSLNIHM +P GK+TS+HF W GLKTGMYYLR+ AA+ I+FTVD +LK
Sbjct: 703 IDQSQSLNIHMKEPTMGKITSMHFAGWKLGLKTGMYYLRTMAASAPIQFTVDQEMLK 759
>gi|365761070|gb|EHN02746.1| Rnr1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 886
Score = 1099 bits (2842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/775 (64%), Positives = 630/775 (81%), Gaps = 15/775 (1%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG++E V FDKITAR+ +L YGL +H D V V+Q++ +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEPVQFDKITARISRLCYGLDPKHIDAVKVTQRIISGVYEGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AET A +TT HPDYA+LAARI +SNLHK T K FS+ ++D+Y + N +G AP+I+DDV
Sbjct: 61 AETCAYLTTVHPDYATLAARIAISNLHKQTTKQFSKVVEDLYRYVNAATGKPAPMISDDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+I+M+N +L+S I+YDRDF Y YFGFKTLERSYLLK+ G+V ERPQH++MRVA+GIH
Sbjct: 121 YNIVMENKDKLNSAIVYDRDFQYSYFGFKTLERSYLLKINGQVAERPQHLIMRVALGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI++A++TY++MS ++FTHASPTLFNAGTP+ Q+SSCFLV MK+DSIEGIYDTLKECA+
Sbjct: 181 RDIEAALETYNLMSLKYFTHASPTLFNAGTPKPQMSSCFLVAMKEDSIEGIYDTLKECAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+F+D+RKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF P APGL+
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEENGTWTLFSPTSAPGLS 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EFE LYT+YEKEG+ K ++AQ LW+ IL++Q ETGTP++++KD CN+KSNQ+NL
Sbjct: 361 DCYGDEFEALYTRYEKEGRG-KTIKAQKLWYSILEAQTETGTPFVVYKDACNRKSNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G IKSSNLC E+++Y++P ETAVCNLAS+ALP ++ S KN +
Sbjct: 420 GVIKSSNLCCEIVEYSAPDETAVCNLASVALPAFIET--------------SEDGKNSTY 465
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+F+KL E+ +VT NLNK+ID NYYPVE AR+SN+RHRPI +GVQGLADTF+LL +PFDS
Sbjct: 466 NFKKLHEIAKVVTRNLNKVIDRNYYPVEEARKSNMRHRPIALGVQGLADTFMLLRLPFDS 525
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+ LN IFETIY+ ++ +S E+A R+GPYET+ GSP S+GILQ DMW P WDW
Sbjct: 526 EEARLLNVQIFETIYHASMESSCELAQRDGPYETFQGSPASQGILQFDMWDQKPYGMWDW 585
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+ I+K+G+RNSL VAPMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +L
Sbjct: 586 DALREDITKHGIRNSLTVAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W +K +I +GS+Q +P +P+ELK +YKTVWEI QKT+++MA DR Y
Sbjct: 646 LRDLVDLGIWDDGMKQYLITQNGSIQGLPNVPQELKDLYKTVWEISQKTIINMAADRSIY 705
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
ID S SLN+ + P GKLTS+HF+ W +GLKTGMYYLR++AA+ AI+FT+D V
Sbjct: 706 IDQSHSLNLFLRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQKV 760
>gi|225011000|ref|ZP_03701466.1| ribonucleoside-diphosphate reductase, alpha subunit [Flavobacteria
bacterium MS024-3C]
gi|225004907|gb|EEG42863.1| ribonucleoside-diphosphate reductase, alpha subunit [Flavobacteria
bacterium MS024-3C]
Length = 827
Score = 1099 bits (2842), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/783 (65%), Positives = 633/783 (80%), Gaps = 24/783 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDGK E + FDKITAR++KL YGL+ E DPV VS +V G+Y GVTTS+LD LA
Sbjct: 1 MYVLKRDGKNEPMMFDKITARVRKLCYGLN-ERVDPVKVSLRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA MTT HPD+A LAARI VSNLHKNTKKSFSET++D+Y + N R+G +PL++D+V
Sbjct: 60 AEIAATMTTTHPDFAKLAARISVSNLHKNTKKSFSETMEDLYKYVNPRNGKSSPLLSDEV 119
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y IM NA LDS IIY+RDF YDYFGFKTLERSYLLK+ GK+VERPQHMLMRV+VGIH
Sbjct: 120 YQAIMDNAELLDSTIIYNRDFGYDYFGFKTLERSYLLKLNGKIVERPQHMLMRVSVGIHP 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D+DSAI+TY +MS+++FTHA+PTLFN+GTP+ Q+SSCFL+ MKDDSI+GIYDTLK+ A
Sbjct: 180 TDMDSAIETYELMSKKYFTHATPTLFNSGTPKPQMSSCFLLAMKDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYI GTNGTSNG+VPML+VFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYISGTNGTSNGVVPMLKVFNDTARYVDQGGGKRKGSFAMY 299
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWHADIF+FLDL+KNHGKEE RARDLFYA+W+PDLFM+RV++N W+L CPNE P L
Sbjct: 300 VEPWHADIFDFLDLKKNHGKEEMRARDLFYAMWIPDLFMKRVEANAEWTLMCPNECPNLF 359
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ F+ LY KYE EGK +K ++A+ LW +IL+SQIETGTPYML+KD N+KSNQ+NL
Sbjct: 360 NNHSEAFDELYLKYESEGKGRKTIKARELWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++YTSP E AVCNLASIALP +V K+ F
Sbjct: 420 GTIRSSNLCTEIMEYTSPDEVAVCNLASIALPMFV--------------------KDGAF 459
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D ++L +VT VT+NLNK+ID NYYPV+ A SN+RHRPIG+GVQGLAD FI+L +PF S
Sbjct: 460 DHKELFKVTKRVTKNLNKVIDRNYYPVKEAENSNMRHRPIGLGVQGLADAFIMLRLPFTS 519
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP---SDR 597
EA++LN++IFET+Y+ AL S E A +GPY++Y GSP+S+G Q ++WG+ S R
Sbjct: 520 DEAKKLNEEIFETLYFAALTASMEEAKADGPYQSYKGSPISQGEFQHNLWGIKDEELSGR 579
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWAKLRKDVKKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
KHLL DL +GLW +K +++ +GSVQ I IP+++K +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLEDLVALGLWDEGLKQELMRANGSVQHIDIIPQDIKELYKTVWELSMKDIIDMSRQR 699
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
G +ID SQSLN+ M+ N+ KLTS+HF+AW GLKTGMYYLR++AA DAIKFT+D + K
Sbjct: 700 GYFIDQSQSLNLFMENANYSKLTSMHFYAWKSGLKTGMYYLRTKAAVDAIKFTLDNTAKK 759
Query: 778 ENP 780
+ P
Sbjct: 760 DVP 762
>gi|363582864|ref|ZP_09315674.1| ribonucleoside-diphosphate reductase large chain [Flavobacteriaceae
bacterium HQM9]
Length = 814
Score = 1098 bits (2841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/795 (64%), Positives = 642/795 (80%), Gaps = 24/795 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+VVKRDG++E + FDKITAR++++ YGL+ E DPV V+ +V G+Y GVTTS+LD LA
Sbjct: 1 MFVVKRDGRKEPIMFDKITARVRQMCYGLN-ELVDPVKVAMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA MT HPDYA LAARI VSNLHKNTKK+FSE IKD+Y + N R+G A LIADDV
Sbjct: 60 AEIAATMTVAHPDYAQLAARISVSNLHKNTKKTFSEVIKDLYEYVNPRTGKGAALIADDV 119
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y ++M+N +LDS IIY+RDF YDYFGFKTLERSYLLK+ G + ERPQHMLMRV++GIH
Sbjct: 120 YKVVMENKEKLDSTIIYNRDFSYDYFGFKTLERSYLLKINGNIAERPQHMLMRVSIGIHV 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD+D+AI+TY +MS+++FTHA+PTLFN+GTP+ Q+SSCFL+ M+DDSI+GIYDTLK+ A
Sbjct: 180 DDLDAAIETYELMSKKFFTHATPTLFNSGTPKPQMSSCFLLTMQDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HNIRATGSYI GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNIRATGSYISGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWHADIF+FL+LRKNHGKEE RARDLFYA+W+ DLFM+RV+++ W+L CP+E PGL
Sbjct: 300 MEPWHADIFDFLELRKNHGKEEMRARDLFYAMWISDLFMKRVEADEDWTLMCPHECPGLY 359
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D EFE LYT+YE EGK +K V+A+++W ++L+SQIETGTPYML+KD N+KSNQ+NL
Sbjct: 360 DVHSEEFESLYTRYEAEGKGRKTVKARDVWEKVLESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++YTSP E AVCNLASIALP +V +G K F
Sbjct: 420 GTIRSSNLCTEIMEYTSPDEIAVCNLASIALPMFV-----------------KGGK---F 459
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D ++L +VT VT+NLNK+ID NYYPV+ A SN+RHRP+G+G+QGLADTFI+L MPF S
Sbjct: 460 DHDELYKVTKRVTKNLNKVIDRNYYPVKQAENSNMRHRPVGLGIQGLADTFIMLRMPFTS 519
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP---SDR 597
EA++LN++IFET+Y+ A+ S+E+A EG YE+Y GSP+S+G Q ++WG+ S R
Sbjct: 520 DEAKKLNEEIFETMYFAAVTASNELAEVEGTYESYEGSPISEGKFQFNLWGIKDEELSGR 579
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR I K+GVRNSLLVAPMPTASTSQILGNNE FEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWNELRKKIKKSGVRNSLLVAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
KHLLHDL E+G+W+ +K+ I+ +GS+Q I +P+ELK +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLHDLVELGMWNDDLKDAIMRANGSIQNIEGMPQELKDLYKTVWELSMKDIIDMSRHR 699
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
G +ID SQSLN+ M+ KLTS+HF+AW GLKTGMYYLR+++A DAIKFT+ T+
Sbjct: 700 GYFIDQSQSLNLFMEGATMSKLTSMHFYAWKSGLKTGMYYLRTKSAVDAIKFTLKTNSEV 759
Query: 778 ENPKVTDDDDAKMAQ 792
E P V DA + +
Sbjct: 760 EKPSVDASVDASLPK 774
>gi|373108816|ref|ZP_09523097.1| ribonucleoside-diphosphate reductase, alpha subunit [Myroides
odoratimimus CCUG 10230]
gi|423129514|ref|ZP_17117189.1| ribonucleoside-diphosphate reductase, alpha subunit [Myroides
odoratimimus CCUG 12901]
gi|371646061|gb|EHO11578.1| ribonucleoside-diphosphate reductase, alpha subunit [Myroides
odoratimimus CCUG 10230]
gi|371648564|gb|EHO14052.1| ribonucleoside-diphosphate reductase, alpha subunit [Myroides
odoratimimus CCUG 12901]
Length = 797
Score = 1098 bits (2841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/818 (63%), Positives = 644/818 (78%), Gaps = 31/818 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG++E V FDKIT R++ L Y L+ E DPV V+ +V G+Y GV TS+LD LA
Sbjct: 1 MYVIKRDGRREPVSFDKITDRIRILCYELN-EFVDPVKVAMRVIEGLYDGVATSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA+MT HPDYA LAARI VSNLHKNTKK FSET++D+Y + N R+G +APLIADDV
Sbjct: 60 AETAASMTVTHPDYALLAARIAVSNLHKNTKKVFSETVEDLYRYVNPRTGQEAPLIADDV 119
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y++I K+ RLDS IIY RDF+YDYFGFKTLERSYLLK+ GK+VERPQHMLMRVAVGIH
Sbjct: 120 YEVIKKHGERLDSTIIYQRDFNYDYFGFKTLERSYLLKLNGKIVERPQHMLMRVAVGIHL 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDIDS I+TY +MS+++FTHA+PTLFN+GTP+ Q+SSCFL+ MKDDSIEGIYDTLK+ A
Sbjct: 180 DDIDSVIETYELMSKKYFTHATPTLFNSGTPKPQMSSCFLLTMKDDSIEGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYIRGTNGTSNGIVPMLRV+NDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIRGTNGTSNGIVPMLRVYNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+F+F++LRKNHGKEE RARDLF ALW+ DLFM+RV+++ W+L CPNE PGL
Sbjct: 300 LEPWHADVFDFIELRKNHGKEEMRARDLFLALWINDLFMQRVEADEKWTLMCPNECPGLC 359
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE+LY KYE EGK ++ ++A+ LW +L++QIETGTPYML+KD N KSNQ+NL
Sbjct: 360 DVYGEEFEQLYLKYENEGKGRRTIKARELWEAVLEAQIETGTPYMLYKDAANAKSNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G I+SSNLCTE+++YTSP E AVCNLASI+LP +V + G N F
Sbjct: 420 GVIRSSNLCTEIMEYTSPDEVAVCNLASISLPMFVED----------------GQFNHQF 463
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
F +VT +T NLN++ID NYYPVE A SN+RHRP+G+GVQGLAD FI++ MPF S
Sbjct: 464 LF----DVTKRITRNLNRVIDRNYYPVEEAYNSNMRHRPVGLGVQGLADAFIMMRMPFTS 519
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP---SDR 597
EA+QLN++IFETIY+ AL S E+A EG Y T+ GSP+SKG Q +MWGV S R
Sbjct: 520 PEAKQLNQEIFETIYFAALTASMEMAKEEGAYSTFEGSPISKGEFQYNMWGVKDEELSGR 579
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + +GVRNSLL+APMPTASTSQILGNNE FEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWASLRKEVMASGVRNSLLLAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
KHLL DL E+GLW+ +K +I+ +GS+Q I IP +++ +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLKDLVELGLWNEDLKQEIMRANGSIQHIDFIPADIRELYKTVWELSMKDIIDMSRQR 699
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDT---- 773
G +ID SQSLN+ M+ N+ KLTS+HF+AW GLKTGMYYLR+++A DAIKFT++
Sbjct: 700 GYFIDQSQSLNLFMEGANYAKLTSMHFYAWKSGLKTGMYYLRTKSAVDAIKFTLNNEKKT 759
Query: 774 --SVLKENPKVTDDDDAKMAQMV-CSLTNREECMACGS 808
+ ++E +V+ +D M Q + N E+C CGS
Sbjct: 760 NPNAIEEVEQVSVEDYQAMLQRARMAANNDEDCEMCGS 797
>gi|195050620|ref|XP_001992932.1| GH13371 [Drosophila grimshawi]
gi|193899991|gb|EDV98857.1| GH13371 [Drosophila grimshawi]
Length = 821
Score = 1098 bits (2840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/829 (61%), Positives = 652/829 (78%), Gaps = 40/829 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
+YV+KRDG+QE +HFDKIT+R++KL Y L+++ DPV ++ KV G+Y GVTT +LD LA
Sbjct: 12 LYVIKRDGRQEEIHFDKITSRIQKLCYNLNMDFVDPVSITLKVINGLYCGVTTQELDNLA 71
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA++TT H DYA LAARI VSNLHK T+K FS+ +D+Y H N+ + +P++++
Sbjct: 72 AEIAASLTTQHADYALLAARIAVSNLHKETRKVFSDVFEDLYKHINKETNEPSPMVSEFH 131
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+I+ K+A RL+S IIYDRDF Y+YFGFKTLERSYLLK+ K+ ERPQHMLMRV++GIH
Sbjct: 132 YNIVKKHADRLNSAIIYDRDFGYNYFGFKTLERSYLLKINHKIAERPQHMLMRVSIGIHG 191
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDID+A++TY+++S+R+FTHASPTLF A T R Q+SSCFL+ M DSIEGI+ ++++CA+
Sbjct: 192 DDIDAAVETYNLLSERYFTHASPTLFAAATNRPQMSSCFLLTMVSDSIEGIFKSVEQCAM 251
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH IRA G+ I GTNGTSNG+VPMLRVFN+ ARYVDQGGGKR GAFA+Y
Sbjct: 252 ISKAAGGIGLNVHCIRAKGTSICGTNGTSNGLVPMLRVFNNVARYVDQGGGKRPGAFAIY 311
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DI EF+DL+KN GKEEHRAR+LFYALW+PDLFM+RV++N WSL CP++ PGL
Sbjct: 312 LEPWHSDILEFMDLKKNTGKEEHRARELFYALWIPDLFMKRVEANEDWSLMCPHKCPGLQ 371
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG +FE+LY +YEKEGKA +V++AQ LWF I+++Q+ETGTPYMLFKD+CN+KSNQQN+
Sbjct: 372 DVWGDDFEKLYVQYEKEGKANRVIKAQTLWFAIIEAQVETGTPYMLFKDSCNRKSNQQNV 431
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++Y++P E AVCNLASIAL +V + ++ +
Sbjct: 432 GTIKCSNLCTEIVEYSAPDEIAVCNLASIALNMFV-------------------TSDKTY 472
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EVT VT+NLNKIID+NYYP+ A++SN RHRPIGIGVQG AD IL+ P++S
Sbjct: 473 DFKKLKEVTKTVTKNLNKIIDINYYPLPEAKKSNFRHRPIGIGVQGFADALILMRHPYES 532
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA LN+ IFETIY+ AL S E+A +EGPYETY GSPVSKGILQ DMWG P+D WDW
Sbjct: 533 EEAALLNQQIFETIYFGALEASCELAQKEGPYETYPGSPVSKGILQYDMWGKTPTDLWDW 592
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I ++GVRNSLLVAPMPTAST+QI+GNNE FEPYTSNIY+RRVLSGEF VVN HL
Sbjct: 593 NSLKLSIKEHGVRNSLLVAPMPTASTAQIMGNNESFEPYTSNIYTRRVLSGEFQVVNHHL 652
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE+ LW +KN+II GS+Q I IP+ ++ +YKTVWEI KT + MA DRG +
Sbjct: 653 LRDLTELDLWDDDMKNQIIASRGSIQNIESIPKNVRDLYKTVWEISVKTTIKMAADRGAF 712
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTV--------- 771
ID SQS NIH+ +PN+GKLTS+HF++W GLKTGMYYLR++ AA+AI+FTV
Sbjct: 713 IDQSQSFNIHVAEPNYGKLTSIHFYSWKAGLKTGMYYLRTKPAANAIQFTVAKGSPVKQT 772
Query: 772 ----DTSVLK-----ENPKVTDDD---DAKMAQMVCSLTNREECMACGS 808
+TS ++ EN V++ D + KMA +VCSL N++ C++CGS
Sbjct: 773 NGLHNTSFVEHNDSMENGNVSESDLERERKMADVVCSLENKDACLSCGS 821
>gi|423133179|ref|ZP_17120826.1| ribonucleoside-diphosphate reductase, alpha subunit [Myroides
odoratimimus CIP 101113]
gi|371649235|gb|EHO14716.1| ribonucleoside-diphosphate reductase, alpha subunit [Myroides
odoratimimus CIP 101113]
Length = 797
Score = 1098 bits (2840), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 518/819 (63%), Positives = 641/819 (78%), Gaps = 33/819 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG++E V FDKIT R++ L Y L+ E DPV V+ +V G+Y GV TS+LD LA
Sbjct: 1 MYVIKRDGRREPVSFDKITDRIRILCYELN-EFVDPVKVAMRVIEGLYDGVATSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA+MT HPDYA LAARI VSNLHKNTKK FSET++D+Y + N R+G +APLIADDV
Sbjct: 60 AETAASMTVTHPDYALLAARIAVSNLHKNTKKVFSETVEDLYRYVNPRTGQEAPLIADDV 119
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y++I K+ RLDS IIY RDF+YDYFGFKTLERSYLLK+ GK+VERPQHMLMRVAVGIH
Sbjct: 120 YEVIKKHGERLDSTIIYQRDFNYDYFGFKTLERSYLLKLNGKIVERPQHMLMRVAVGIHL 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDIDS I+TY +MS+++FTHA+PTLFN+GTP+ Q+SSCFL+ MKDDSIEGIYDTLK+ A
Sbjct: 180 DDIDSVIETYELMSKKYFTHATPTLFNSGTPKPQMSSCFLLTMKDDSIEGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYIRGTNGTSNGIVPMLRV+NDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIRGTNGTSNGIVPMLRVYNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+F+F++LRKNHGKEE RARDLF ALW+ DLFM+RV+++ W+L CPNE PGL
Sbjct: 300 LEPWHADVFDFIELRKNHGKEEMRARDLFLALWINDLFMQRVEADEKWTLMCPNECPGLC 359
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE+LY KYE EGK ++ ++A+ LW +L++QIETGTPYML+KD N KSNQ+NL
Sbjct: 360 DVYGEEFEQLYLKYENEGKGRRTIKARELWEAVLEAQIETGTPYMLYKDAANAKSNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G I+SSNLCTE+++YTSP E AVCNLASI+LP +V + G N F
Sbjct: 420 GVIRSSNLCTEIMEYTSPDEVAVCNLASISLPMFVED----------------GQFNHQF 463
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
F +VT +T NLN++ID NYYPVE A SN+RHRP+G+GVQGLAD FI++ MPF S
Sbjct: 464 LF----DVTKRITRNLNRVIDRNYYPVEEAYNSNMRHRPVGLGVQGLADAFIMMRMPFTS 519
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP---SDR 597
EA+QLN++IFETIY+ AL S E+A EG Y T+ GSP+SKG Q +MWGV S R
Sbjct: 520 PEAKQLNQEIFETIYFAALTASMEMAKEEGAYSTFEGSPISKGEFQYNMWGVKDEELSGR 579
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + +GVRNSLL+APMPTASTSQILGNNE FEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWASLRKEVMASGVRNSLLLAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
KHLL DL E+GLW+ +K +I+ +GS+Q I IP +++ +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLKDLVELGLWNEDLKQEIMRANGSIQHIDFIPADIRELYKTVWELSMKDIIDMSRQR 699
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
G +ID SQSLN+ M+ N+ KLTS+HF+AW GLKTGMYYLR+++A DAIKFT++ K
Sbjct: 700 GYFIDQSQSLNLFMEGANYAKLTSMHFYAWKSGLKTGMYYLRTKSAVDAIKFTLNNEK-K 758
Query: 778 ENPKV--------TDDDDAKMAQMVCSLTNREECMACGS 808
NP +D A + + + N E+C CGS
Sbjct: 759 TNPNAIEEVGQVSVEDYQAMLQRARMAANNDEDCEMCGS 797
>gi|170088813|ref|XP_001875629.1| ribonucleotide reductase alpha subunit [Laccaria bicolor S238N-H82]
gi|164648889|gb|EDR13131.1| ribonucleotide reductase alpha subunit [Laccaria bicolor S238N-H82]
Length = 881
Score = 1098 bits (2839), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/777 (65%), Positives = 623/777 (80%), Gaps = 20/777 (2%)
Query: 2 YVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAA 61
+V KR ++E V FDKITAR++KL YGL+ DP+ +QKV GVY GVTT +LD LAA
Sbjct: 3 FVFKRGARKERVQFDKITARIQKLCYGLNENFVDPIEFTQKVVAGVYHGVTTVELDNLAA 62
Query: 62 ETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVY 121
ETAA +TT HPDYA LAARI VSNLHK TKK+FS+ IKD+Y + N ++ A +I+ ++Y
Sbjct: 63 ETAAYLTTKHPDYAVLAARIAVSNLHKETKKNFSQVIKDLYEYVNPKNRRPAGMISQEIY 122
Query: 122 DIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKD 181
+I+ +NA LDS IIY+RDF +++FGFKTLERSYLL++ G+V ERPQHM+MRVAVGIH
Sbjct: 123 EIVRENAEALDSAIIYNRDFSFNFFGFKTLERSYLLRLNGRVAERPQHMIMRVAVGIHGR 182
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAII 241
DID ++TY++MS+R+FTHASPTLFNAGTP QLSSCFLVCMKDDSIEGIYDTLK CA+I
Sbjct: 183 DIDRVVETYNLMSERYFTHASPTLFNAGTPHPQLSSCFLVCMKDDSIEGIYDTLKNCAMI 242
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SK+AGGIG+S+H IRATGSYI GTNG SNGIVPMLR ++ TARYVDQGG KR GAFA+Y+
Sbjct: 243 SKTAGGIGLSIHCIRATGSYIAGTNGYSNGIVPMLRAYDATARYVDQGGNKRPGAFAIYI 302
Query: 302 EPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLAD 361
EPWHAD+FEFLDLRKNHGKEE RARDLFYALW+PDLFM+RV++NG WSLFCPNEA GL +
Sbjct: 303 EPWHADVFEFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVEANGDWSLFCPNEAAGLGE 362
Query: 362 CWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG 421
EFE LY KYEKEG+A+K + AQ LW+ IL++QIETG P+M++KD N KSNQ+NLG
Sbjct: 363 VHSAEFEALYEKYEKEGRARKSIPAQKLWYAILEAQIETGGPFMVYKDHANSKSNQKNLG 422
Query: 422 TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFD 481
TIKSSNLCTE+I+Y+SP ETAVCNLAS+ALP ++ N +D
Sbjct: 423 TIKSSNLCTEIIEYSSPEETAVCNLASLALPTFI--------------------SNGKYD 462
Query: 482 FEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDST 541
F+KL +VT +V NLN+IIDVNYYP+ AR SN+RHRPIG+GVQGLADTF+ L MPFDS
Sbjct: 463 FQKLHDVTKVVAYNLNRIIDVNYYPIPEARLSNMRHRPIGVGVQGLADTFMALRMPFDSP 522
Query: 542 EAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWG 601
A++LN IFETIY+ AL SSE+A R+GPYET+ GSP G LQ D+WGV P+ WDW
Sbjct: 523 AAKELNIQIFETIYHGALEASSELAERDGPYETWMGSPAQLGQLQYDLWGVTPTGLWDWT 582
Query: 602 GLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
L++ I++ G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVL+GEF VV LL
Sbjct: 583 SLKEKIARTGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLAGEFQVVCPWLL 642
Query: 662 HDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYI 721
+L ++GLW +KN II +GSVQ IP IP+++KAIYKTVWEI QK ++D+A DRG +I
Sbjct: 643 RELVDLGLWDDNMKNMIIAHNGSVQNIPTIPDDVKAIYKTVWEISQKKVLDLAADRGAFI 702
Query: 722 DHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE 778
SQSLN+H+ P G+LTS+HF+ W +GLKTGMYYLR+R AA AI+FTVD S+LKE
Sbjct: 703 CQSQSLNVHLQAPTLGQLTSMHFYGWKKGLKTGMYYLRTRPAASAIQFTVDQSLLKE 759
>gi|146298284|ref|YP_001192875.1| ribonucleoside-diphosphate reductase subunit alpha [Flavobacterium
johnsoniae UW101]
gi|146152702|gb|ABQ03556.1| ribonucleoside-diphosphate reductase, alpha subunit [Flavobacterium
johnsoniae UW101]
Length = 797
Score = 1097 bits (2838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/819 (63%), Positives = 642/819 (78%), Gaps = 33/819 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDG +E V FDKIT R+KKL YGL+ E DPV V+ +V G+Y GV+TS+LD LA
Sbjct: 1 MYVVKRDGHREPVMFDKITERIKKLCYGLN-ELVDPVKVAMRVIEGLYDGVSTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA+MT HPDYA LAAR+ +SNLH NTKKSFSET+KDMYN+ N R+G APLIADDV
Sbjct: 60 AETAASMTIAHPDYAQLAARVAISNLHSNTKKSFSETMKDMYNYVNPRNGQDAPLIADDV 119
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y +I +NAA LDS IIY RDF+YDYFGFKTLERSYLLK+ GK+VERPQHMLMRV+VGIH
Sbjct: 120 YKVIQENAAFLDSHIIYTRDFNYDYFGFKTLERSYLLKINGKIVERPQHMLMRVSVGIHL 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD+ S I+TY +MS+++FTHA+PTLFNAGTP+ Q+SSCFL+ M+DDSI+GIYDTLK+ A
Sbjct: 180 DDLKSVIETYDLMSKKFFTHATPTLFNAGTPKPQMSSCFLLAMQDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+E WHADIF+FLDL+KN GKEE RARDLF+A+W DLFM+RVQ + W+L CPNE PGL
Sbjct: 300 IETWHADIFDFLDLKKNTGKEEMRARDLFFAMWTSDLFMKRVQEDSTWTLMCPNECPGLY 359
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LYT YE GK +K ++A+ LW +IL+SQIETGTPYML+KD N+KSN +NL
Sbjct: 360 DVYGDEFEALYTDYEFRGKGRKTIRARELWEKILESQIETGTPYMLYKDAANRKSNHKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE++++TS E AVCNLASI+LP ++ N F
Sbjct: 420 GTIRSSNLCTEIMEFTSKDEIAVCNLASISLPMFI--------------------DNGEF 459
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D + L VT VT NLNK+ID NYYPV+ A SN+RHRP+G+GVQGLAD FI+L MPF S
Sbjct: 460 DHQALYNVTKRVTRNLNKVIDRNYYPVKEAENSNMRHRPVGLGVQGLADAFIMLRMPFTS 519
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP---SDR 597
EA++LN++IFET+Y+ A+ S E+A EGPY T+ GSP+S+G Q +MWG+ S R
Sbjct: 520 DEAKKLNQEIFETLYFAAVTASMEMAKEEGPYSTFEGSPMSQGEFQYNMWGMKDEELSGR 579
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + ++GVRNSLLVAPMPTASTSQILGNNE FEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWASLRKEVVEHGVRNSLLVAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
KHLL DL ++GLW+ +K +I+ +GSVQ I +IP++LK +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLEDLVKLGLWNEDLKQEIMRHNGSVQNIDKIPQDLKDLYKTVWEMSMKDIIDMSRQR 699
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDT---- 773
G +ID SQSLN+ M N+ KLTS+HF+AW GLKTGMYYLR++AA DAIKFT++
Sbjct: 700 GYFIDQSQSLNLFMQDANYSKLTSMHFYAWQSGLKTGMYYLRTKAAVDAIKFTLNNDKKE 759
Query: 774 ----SVLKENPKVTDDDDAKMAQMVCSLTNREECMACGS 808
S+++E ++ +D M + + E+C CGS
Sbjct: 760 ETAPSLVQETEAISVEDYKAML-LKAQAADPEDCEMCGS 797
>gi|351702964|gb|EHB05883.1| Ribonucleoside-diphosphate reductase large subunit, partial
[Heterocephalus glaber]
Length = 787
Score = 1097 bits (2838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 528/806 (65%), Positives = 644/806 (79%), Gaps = 23/806 (2%)
Query: 7 DGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAA 66
DG+QE V FDKIT+R++KL YGL+++ DP ++ KV G+Y GVTT +LD LAAETAA
Sbjct: 1 DGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLAAETAAT 60
Query: 67 MTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMK 126
+TT HPDYA LAARI VSNLHK TKK FS+ ++D+YN+ N +G +P++A DI++
Sbjct: 61 LTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGRHSPMVAKSTLDIVLA 120
Query: 127 NAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSA 186
N RL+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRV+VGIHK+DID+A
Sbjct: 121 NKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHKEDIDAA 180
Query: 187 IKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAG 246
I+TY+++S++WFTHASPTLFNAGT R QLSSCFL+ MKDDSIEGIYDTLK+CA+ISKSAG
Sbjct: 181 IETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCALISKSAG 240
Query: 247 GIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHA 306
GIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+YLEPWH
Sbjct: 241 GIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIYLEPWHL 300
Query: 307 DIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTE 366
DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV++N WSL CPNE PGL + WG E
Sbjct: 301 DIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLDEVWGEE 360
Query: 367 FERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKD-TCNKKSNQQNLGTIKS 425
FE+LY YEK+G+ ++VV+AQ LW+ I++SQ ETGTPYML+KD + N+KSNQQNLGTIK
Sbjct: 361 FEKLYESYEKQGRVRRVVKAQQLWYAIIESQTETGTPYMLYKDYSYNQKSNQQNLGTIKC 420
Query: 426 SNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKL 485
SNLCTE+++YTS E AVCNLAS+AL YV + +DF+KL
Sbjct: 421 SNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTYDFKKL 461
Query: 486 AEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQ 545
AEVT ++ NLNKIID+NYYP+ A SN HRPIGIGVQGLAD FIL+ PF+S EAQ
Sbjct: 462 AEVTKVIVRNLNKIIDINYYPIPEAHLSNKCHRPIGIGVQGLADAFILMRYPFESPEAQL 521
Query: 546 LNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRD 605
LNK IFETIYY AL S ++A GPYETY GSPVSKGILQ DMW V P+D WDW L++
Sbjct: 522 LNKQIFETIYYGALEASCDLAKEHGPYETYEGSPVSKGILQYDMWNVTPTDLWDWKLLKE 581
Query: 606 MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLT 665
I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HLL DLT
Sbjct: 582 KIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHLLKDLT 641
Query: 666 EMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQ 725
E GLW+ +KN+II +GS+Q I +IP++LK +YKTVWEI QKT++ MA DRG +ID SQ
Sbjct: 642 ERGLWNEEMKNQIIACNGSIQSILEIPDDLKQLYKTVWEISQKTVLKMAADRGAFIDQSQ 701
Query: 726 SLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDD 785
SLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR+R AA+ I+FT++ LK+ K + +
Sbjct: 702 SLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKEKASKE 761
Query: 786 DDA---KMAQMVCSLTNREECMACGS 808
++ A MVCSL NR+EC+ CGS
Sbjct: 762 EEEKERNTAAMVCSLENRDECLMCGS 787
>gi|255724148|ref|XP_002547003.1| ribonucleoside-diphosphate reductase large chain [Candida
tropicalis MYA-3404]
gi|240134894|gb|EER34448.1| ribonucleoside-diphosphate reductase large chain [Candida
tropicalis MYA-3404]
Length = 865
Score = 1097 bits (2838), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/775 (63%), Positives = 627/775 (80%), Gaps = 16/775 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG++E V FDKITAR+++L YGL H +PV ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MYVFKRDGRKEPVRFDKITARVQRLCYGLDPNHVEPVAITQKVISGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA MTT HPDYA LAARI VSNLHK T K +S+ + +Y + N ++GL +P+I+ +
Sbjct: 61 AEIAATMTTVHPDYAVLAARIAVSNLHKQTTKQYSKVSQALYEYVNPKTGLHSPMISKET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YDIIM++ L+S I+YDRDF+Y+YFGFKT+ERSYLL++ GKV ERPQH++MRVA+GIH
Sbjct: 121 YDIIMEHEDELNSAIVYDRDFNYNYFGFKTMERSYLLRINGKVAERPQHLIMRVAIGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI I+TY++MSQR+FTH SP LFNAGTPR Q+SSCFL+ MKDDSIEGIYDTLK CA+
Sbjct: 181 KDIPRVIETYNLMSQRYFTHGSPCLFNAGTPRPQMSSCFLLAMKDDSIEGIYDTLKSCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+ +HNIR+TG+YI GTNGTSNGI+PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLHIHNIRSTGAYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DIF+F+D+RKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF PNEAPGL+
Sbjct: 301 LEPWHSDIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNGDWTLFSPNEAPGLS 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LYT+YEKE + ++ ++AQ LW+ IL +Q ETGTP+ML+KD CN K+NQ+NL
Sbjct: 361 DVYGDEFEELYTRYEKENRGRQTIKAQKLWYAILSAQTETGTPFMLYKDACNTKTNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G IKSSNLC E+++Y++P E AVCNLASIALP +V N ++
Sbjct: 421 GVIKSSNLCCEIVEYSAPDEVAVCNLASIALPSFVE----------------HDESNTWY 464
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+FEKL EVT +VT NLN++ID NYYPV A RSN+RHRPI +GVQGLAD F+ L +PFDS
Sbjct: 465 NFEKLHEVTKVVTRNLNRVIDRNYYPVPEAERSNMRHRPIALGVQGLADAFMSLRLPFDS 524
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LN IFETIY+ A+ +S E+AA EG YE+Y GSP S+G+LQ D+W P++ WDW
Sbjct: 525 QEARELNIQIFETIYHAAVESSIELAAEEGVYESYPGSPASQGLLQFDLWNRKPTELWDW 584
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ ++K+G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL+GEF +VN +L
Sbjct: 585 DTLKQKMAKHGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQIVNPYL 644
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W+ +K+ II ++GS+Q +P IP+E+KA+YKTVWEI QK ++DMA DR +
Sbjct: 645 LKDLVDLGIWNDAMKSNIISNNGSIQGLPNIPDEIKALYKTVWEISQKHIIDMAADRAAF 704
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
ID SQSLNIH+ P GKLTS+HF+ W +GLKTGMYYLR++AA+ AI+FT+D V
Sbjct: 705 IDQSQSLNIHIKDPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDKLV 759
>gi|443896993|dbj|GAC74335.1| hypothetical protein PANT_11d00009 [Pseudozyma antarctica T-34]
Length = 1291
Score = 1097 bits (2837), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/778 (64%), Positives = 627/778 (80%), Gaps = 18/778 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
+YV KRDG++E V FDK+TAR+ KL YGL + DP+ +++KV G+Y+GVTT +LD LA
Sbjct: 2 IYVYKRDGRKEVVKFDKVTARISKLCYGLDQNYVDPIEITRKVIDGIYEGVTTVELDNLA 61
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA TT HPDYA LAARI +SNLHK T K+FS+ ++ +Y++ N ++G +P+I+D
Sbjct: 62 AETAAYKTTTHPDYAVLAARIAISNLHKETSKNFSQVVQALYDYINPKNGRHSPMISDAT 121
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y ++M + +LDS IIY+RDF Y++FGFKTLERSYLL++ GKV ERPQHMLMRVAVGIH
Sbjct: 122 YKVVMAHKDQLDSAIIYERDFHYNFFGFKTLERSYLLRINGKVAERPQHMLMRVAVGIHG 181
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI+SAI+TY++MSQ++FTHASPTLFNAGTP QLSSCFLV MKDDSI+GIYDTLK CA+
Sbjct: 182 EDIESAIETYNLMSQKYFTHASPTLFNAGTPHPQLSSCFLVTMKDDSIDGIYDTLKTCAM 241
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+++H IR TGSYI GTNG SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 242 ISKTAGGIGLNIHCIRGTGSYIAGTNGVSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 301
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWH+D+FEFLDLRKNHGKEE RAR+LFYALWVPDLFM+RV+ NG WSL CPNE PGLA
Sbjct: 302 IEPWHSDVFEFLDLRKNHGKEEVRARELFYALWVPDLFMKRVEQNGDWSLMCPNECPGLA 361
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EFERLY +YE EG++K+ V+AQ LW+ IL+SQ ETG P++L+KD N+KSNQ+NL
Sbjct: 362 DCYGDEFERLYERYEAEGRSKRTVKAQKLWYAILESQTETGNPFILYKDAANRKSNQKNL 421
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+I+Y+SP E AVCNLASIALP ++ + ++ +
Sbjct: 422 GTIKCSNLCTEIIEYSSPDEVAVCNLASIALPTFIDPV------------------SKTY 463
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF++L V + +NLNKIID+NYYPVE ARRSN+RHRPIGIGVQGLAD F+++G F+S
Sbjct: 464 DFKRLHSVAKAICKNLNKIIDINYYPVEEARRSNMRHRPIGIGVQGLADAFMIMGYAFES 523
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LN IFETIY+ AL S E+A + G YETY GSP S+G LQ DMWGV PSD WDW
Sbjct: 524 PEARKLNVQIFETIYHAALERSCELAQQHGTYETYAGSPASQGELQYDMWGVTPSDLWDW 583
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+++G+RNSLL+APMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 584 AELKAKIAQHGLRNSLLLAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 643
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L +L E GLW+ +KN+II GS+Q +P IP+ +K +YKTVWEI QK ++DMA DRG +
Sbjct: 644 LRELVEQGLWNDTMKNRIIAHGGSIQNVPGIPDRIKKLYKTVWEISQKAIIDMAADRGAF 703
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE 778
I SQSLNIH+ P FG+LTS+HF+ W +GLKTG YYLR++ A++A++FT+ + + E
Sbjct: 704 ICQSQSLNIHLSAPTFGQLTSMHFYGWKKGLKTGTYYLRTKPASNAVQFTLSVAEVNE 761
>gi|19115403|ref|NP_594491.1| ribonucleoside reductase large subunit Cdc22 [Schizosaccharomyces
pombe 972h-]
gi|1350600|sp|P36602.2|RIR1_SCHPO RecName: Full=Ribonucleoside-diphosphate reductase large chain;
AltName: Full=Ribonucleotide reductase
gi|1067207|emb|CAA91952.1| ribonucleoside reductase large subunit Cdc22 [Schizosaccharomyces
pombe]
Length = 811
Score = 1097 bits (2836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/831 (62%), Positives = 648/831 (77%), Gaps = 43/831 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG+QE V FDKITAR+ +L YGL +H DPV ++QKV +GVY GVTT +LD LA
Sbjct: 1 MFVYKRDGRQEKVAFDKITARVSRLCYGLDSDHVDPVEITQKVISGVYPGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA LAARI VSNLHK T+K FS ++ ++++ N ++ AP+I+D +
Sbjct: 61 AETAATMTTKHPDYAILAARIAVSNLHKQTEKVFSTVVQQLHDYVNPKTDKPAPMISDKI 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YDI+MK+ LDS IIYDRDF Y++FGFKTLERSYLL++ GKV ERPQHM+MRVAVGIH
Sbjct: 121 YDIVMKHKDELDSAIIYDRDFTYNFFGFKTLERSYLLRIDGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI++AI+TY++MSQR+FTHASPTLFNAGTPR QLSSCFLV MKDDSIEGIYDTLK CA+
Sbjct: 181 EDIEAAIETYNLMSQRYFTHASPTLFNAGTPRPQLSSCFLVTMKDDSIEGIYDTLKMCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+++HNIRATGSYI GTNGTSNGIVPM+RV+N+TARYVDQGG KR GAFA Y
Sbjct: 241 ISKTAGGIGINIHNIRATGSYIAGTNGTSNGIVPMIRVYNNTARYVDQGGNKRPGAFAAY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+ +FL+LRK HG E+ RAR++FYALW+PDLFM+RV+ N W+ FCPNEAPGLA
Sbjct: 301 LEPWHADVMDFLELRKTHGNEDFRAREMFYALWIPDLFMQRVERNEQWTFFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG EF LY KYEKE + ++ + AQ +W+ IL+SQ+ETG P+ML+KD+CN+KSNQ+N+
Sbjct: 361 DVWGDEFVALYEKYEKENRGRRSLPAQKVWYAILQSQVETGNPFMLYKDSCNRKSNQKNV 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+ SNLCTE+++Y+SP E AVCNLAS+ALP ++ K+ +
Sbjct: 421 GTIRCSNLCTEIVEYSSPDEVAVCNLASVALPTFI--------------------KDGKY 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+F+KL +V +VT NLNKIIDVNYYPV ARRSN+RHRP+G+GVQGLAD F L +PF+S
Sbjct: 461 NFQKLHDVVKVVTRNLNKIIDVNYYPVPEARRSNMRHRPVGLGVQGLADAFFALRLPFES 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
A++LN IFETIY+ AL S EIA EG YE+Y GSP S+GILQ DMW VNP+D WDW
Sbjct: 521 AGAKKLNIQIFETIYHAALEASCEIAQVEGTYESYEGSPASQGILQYDMWNVNPTDLWDW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K+G+RNSLLVAPMPTASTSQILG NECFEPYTSN+Y RRVLSGEF +VN L
Sbjct: 581 AELKEKIAKHGIRNSLLVAPMPTASTSQILGFNECFEPYTSNMYQRRVLSGEFQIVNPWL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL E LW+ +KNK++ DGS+Q IP+IP++LK +YKTVWEI QKT++D A DRG +
Sbjct: 641 LKDLVERDLWNEDMKNKLVMLDGSIQAIPEIPQDLKDLYKTVWEISQKTVIDYAADRGPF 700
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK--- 777
ID SQSLNIH+ P++GK+TS+HF+ W +GLKTGMYYLR+ AA+ AIKFTVD L+
Sbjct: 701 IDQSQSLNIHLKDPSYGKITSMHFYGWKKGLKTGMYYLRTMAASAAIKFTVDPVALRARN 760
Query: 778 -----ENPK-VTDDDDAKMAQ--------------MVCSLTNREECMACGS 808
EN K V + A+++ + CS+ N E C C +
Sbjct: 761 EESNEENKKPVIKNGKAEISAEPTKEEIDIYNEKVLACSIKNPEACEMCSA 811
>gi|402495789|ref|ZP_10842509.1| ribonucleoside-diphosphate reductase large chain [Aquimarina
agarilytica ZC1]
Length = 816
Score = 1097 bits (2836), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/796 (64%), Positives = 643/796 (80%), Gaps = 24/796 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+VVKRDG++E + FDKITAR++++ YGL+ E DPV V+ +V G+Y GVTTS+LD LA
Sbjct: 1 MFVVKRDGRKEPIMFDKITARVRQMCYGLN-ELVDPVKVAMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA MT HPDYA LAARI VSNLHKNTKK+FSE +KD+Y + N R+G A LIADDV
Sbjct: 60 AEIAATMTIAHPDYAQLAARISVSNLHKNTKKTFSEVVKDLYEYVNPRTGKDAALIADDV 119
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y ++M+N +LDS IIY+RDF YDYFGFKTLERSYLLK+ GK+ ERPQHMLMRV++GIH
Sbjct: 120 YKVVMENKEKLDSTIIYNRDFSYDYFGFKTLERSYLLKLNGKIAERPQHMLMRVSIGIHI 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD+D+AI+TY +MS+++FTHA+PTLFN+GTP+ Q+SSCFL+ M+DDSI+GIYDTLK+ A
Sbjct: 180 DDLDAAIETYELMSKKFFTHATPTLFNSGTPKPQMSSCFLLTMQDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HNIRATGSYI GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNIRATGSYISGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWHADIF+FL+LRKNHGKEE RARDLFYA+W+ DLFM+RV+++ W+L CP+E PGL
Sbjct: 300 MEPWHADIFDFLELRKNHGKEEMRARDLFYAMWISDLFMKRVEADENWTLMCPHECPGLY 359
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D EFE LYT+YE EGK ++ V+A+ +W ++L+SQIETGTPYML+KD N+KSNQ+NL
Sbjct: 360 DVHSEEFESLYTRYEAEGKGRRTVKAREVWEKVLESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++YTSP E AVCNLASIALP +V +G K F
Sbjct: 420 GTIRSSNLCTEIMEYTSPDEIAVCNLASIALPMFV-----------------KGGK---F 459
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D ++L +VT VT+NLNK+ID NYYPV+ A SN+RHRP+G+G+QGLADTFI+L MPF S
Sbjct: 460 DHDELFKVTKRVTKNLNKVIDRNYYPVKQAENSNMRHRPVGLGIQGLADTFIMLRMPFTS 519
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP---SDR 597
EA++LN++IFET+Y+ A+ S+E+A EG YE+Y GSP+S+G Q ++WG+ S R
Sbjct: 520 DEAKKLNEEIFETMYFAAVTASNELAEVEGTYESYEGSPISQGEFQFNLWGIKDEELSGR 579
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR I K+GVRNSLL+APMPTASTSQILGNNE FEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWKALRAKIQKSGVRNSLLMAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
KHLLHDL E+GLW+ +K+ I+ +GS+Q I IP++LK +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLHDLVELGLWNDDLKDAIMRANGSIQNIDGIPQDLKELYKTVWEMSMKDIIDMSRHR 699
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
G +ID SQSLN+ M+ N KLTS+HF+AW GLKTGMYYLR+++A DAIKFT+ T+
Sbjct: 700 GYFIDQSQSLNLFMEGANNAKLTSMHFYAWKSGLKTGMYYLRTKSAVDAIKFTLKTNSEV 759
Query: 778 ENPKVTDDDDAKMAQM 793
E P V D + ++
Sbjct: 760 EKPSVDASVDVSLPKI 775
>gi|388855438|emb|CCF50884.1| probable RNR1-ribonucleoside-diphosphate reductase large subunit
[Ustilago hordei]
Length = 892
Score = 1096 bits (2835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/778 (64%), Positives = 624/778 (80%), Gaps = 18/778 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
+YV KRDG++E V FDK+TAR+ KL YGL + DP+ +++KV G+Y+GVTT +LD LA
Sbjct: 2 IYVYKRDGRKEVVKFDKVTARISKLCYGLDQNYVDPIEITRKVIDGIYEGVTTVELDNLA 61
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA TT HPDYA LAARI +SNLHK T K+FS+ ++D+Y + N ++ +P+I+D
Sbjct: 62 AETAAYKTTTHPDYAVLAARIAISNLHKETSKNFSQVVQDLYEYVNPKNRRHSPMISDAT 121
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y ++M++ +LDS IIY+RDF Y++FGFKTLERSYLL++ GKV ERPQHM+MRVAVGIH
Sbjct: 122 YKVVMQHKDQLDSAIIYERDFHYNFFGFKTLERSYLLRINGKVAERPQHMIMRVAVGIHG 181
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI+SAI+TY++MSQ++FTHASPTLFNAGTP QLSSCFLV MKDDSI+GIYDTLK CA+
Sbjct: 182 QDIESAIETYNLMSQKYFTHASPTLFNAGTPHPQLSSCFLVTMKDDSIDGIYDTLKTCAM 241
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+++H IR TGSYI GTNG SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 242 ISKTAGGIGLNIHCIRGTGSYIAGTNGVSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 301
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWH+D+FEFLDLRKNHGKEE RAR+LFYALWVPDLFM+RV+ NG WSL CPNE PGLA
Sbjct: 302 IEPWHSDVFEFLDLRKNHGKEEVRARELFYALWVPDLFMKRVEQNGDWSLMCPNECPGLA 361
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EFERLY +YE EG+ K+ V+AQ LW+ IL+SQ ETG P++L+KD N+KSNQ+NL
Sbjct: 362 DCYGDEFERLYERYEAEGRCKRTVKAQKLWYAILESQTETGNPFILYKDAANRKSNQKNL 421
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+I+Y++P E AVCNLASIALP ++ + + +
Sbjct: 422 GTIKCSNLCTEIIEYSAPDEVAVCNLASIALPTFIDPV------------------TKVY 463
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF++L EV + +NLNKIID+NYYPVE ARRSN+RHRPIGIGVQGLAD F+++G F+S
Sbjct: 464 DFKRLHEVAKAICKNLNKIIDINYYPVEEARRSNMRHRPIGIGVQGLADAFMIMGYAFES 523
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LN IFETIY+ AL S E+A G YETY GSP S+G LQ DMWGV PSD WDW
Sbjct: 524 PEARRLNVQIFETIYHAALERSCELAQEHGTYETYQGSPASQGELQYDMWGVTPSDLWDW 583
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+K+G+RNSLL+APMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 584 ASLKANIAKHGLRNSLLLAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 643
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L +L E GLW+ +KN+II GS+Q +P IP+ +K +YKTVWEI QK ++DMA DRG +
Sbjct: 644 LRELVEQGLWNDTMKNRIIAHGGSIQNVPGIPDRIKKLYKTVWEISQKAIIDMAADRGAF 703
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE 778
I SQSLNIH+ P FG+LTS+HF+ W +GLKTG YYLR++ A++A++FT+ + + E
Sbjct: 704 ICQSQSLNIHLSAPTFGQLTSMHFYGWKKGLKTGTYYLRTKPASNAVQFTLSVAEVNE 761
>gi|399033616|ref|ZP_10732238.1| ribonucleoside-diphosphate reductase, alpha subunit [Flavobacterium
sp. CF136]
gi|398068051|gb|EJL59512.1| ribonucleoside-diphosphate reductase, alpha subunit [Flavobacterium
sp. CF136]
Length = 796
Score = 1096 bits (2835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/817 (63%), Positives = 638/817 (78%), Gaps = 30/817 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDG +E V FDKIT R+KKL YGL+ E DPV V+ +V G+Y GV+TS+LD LA
Sbjct: 1 MYVVKRDGHKEPVMFDKITERIKKLCYGLN-ELVDPVKVAMRVIEGLYDGVSTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA+MT HPDYA LAAR+ +SNLH NTKKSFSET+KDMY++ N R+G APL++D+V
Sbjct: 60 AETAASMTIAHPDYAQLAARVAISNLHSNTKKSFSETMKDMYHYVNPRNGQDAPLLSDEV 119
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+ +I +NAA LDS IIY RDF+YDYFGFKTLERSYLLK+ GK+VERPQHMLMRV+VGIH
Sbjct: 120 FKVIQENAAFLDSHIIYTRDFNYDYFGFKTLERSYLLKINGKIVERPQHMLMRVSVGIHL 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD+ S I+TY +MS+++FTHA+PTLFNAGTP+ Q+SSCFL+ M+DDSI+GIYDTLK+ A
Sbjct: 180 DDLKSVIETYDLMSKKYFTHATPTLFNAGTPKPQMSSCFLLAMQDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+E WHADIFEFLDL+KN GKEE RARDLF+A+W DLFM+RVQ + W+L CPNE PGL
Sbjct: 300 IETWHADIFEFLDLKKNTGKEEMRARDLFFAMWTSDLFMKRVQEDTTWTLMCPNECPGLY 359
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LY YE GK +K ++A+ LW +IL+SQIETGTPYML+KD N+KSN +NL
Sbjct: 360 DVYGEEFEALYMDYEFRGKGRKTIRARELWEKILESQIETGTPYMLYKDAANRKSNHKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++YTS E AVCNLASI+LP ++ +N F
Sbjct: 420 GTIRSSNLCTEIMEYTSKDEIAVCNLASISLPMFI--------------------ENGKF 459
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D + L VT VT NLNK+ID NYYPV+ A SN+RHRP+G+GVQGLAD FI+L +PF S
Sbjct: 460 DHQALYNVTKRVTRNLNKVIDRNYYPVKEAENSNMRHRPVGLGVQGLADAFIMLRLPFTS 519
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP---SDR 597
EA+ LN++IFET+Y+ A+ S E+A EGPY T+ GSP+SKG Q +MWG+ S R
Sbjct: 520 DEAKALNQEIFETLYFAAVTASMEMAKEEGPYSTFEGSPMSKGEFQYNMWGMKDEELSGR 579
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + ++GVRNSLLVAPMPTASTSQILGNNE FEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWASLRKEVVEHGVRNSLLVAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
KHLLHDL E GLW+ +K +I+ +GSVQ I IP++LK +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLHDLVERGLWNETLKQEIMRHNGSVQNIDVIPQDLKELYKTVWEMSMKDIIDMSRQR 699
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
G +ID SQSLN+ M N+ KLTS+HF+AW GLKTGMYYLR+++A DAIKFT++ +
Sbjct: 700 GYFIDQSQSLNLFMQDANYSKLTSMHFYAWQSGLKTGMYYLRTKSAVDAIKFTLNNDKKE 759
Query: 778 ENPKVTDD------DDAKMAQMVCSLTNREECMACGS 808
E P + + +D K + + E+C CGS
Sbjct: 760 EVPSLVAETEEISVEDYKAMLLKAQAADPEDCEMCGS 796
>gi|383451661|ref|YP_005358382.1| Ribonucleoside-diphosphate reductase, alpha subunit [Flavobacterium
indicum GPTSA100-9]
gi|380503283|emb|CCG54325.1| Ribonucleoside-diphosphate reductase, alpha subunit [Flavobacterium
indicum GPTSA100-9]
Length = 795
Score = 1096 bits (2835), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/817 (62%), Positives = 648/817 (79%), Gaps = 31/817 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDG++E V FDKIT R++ L Y L+ E DPV V+ +V G+Y GVTTS+LD LA
Sbjct: 1 MYVVKRDGRKEPVSFDKITDRIRILCYELN-ERVDPVKVAMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA+MT HPD+A LAARI VSNLHKNTKKSFSET+ D+Y++ N R+G K+PL+ADDV
Sbjct: 60 AETAASMTVTHPDFAQLAARIAVSNLHKNTKKSFSETMLDLYHYVNPRTGKKSPLLADDV 119
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y++IM NA +LDS IIY+RDF+YDYFGFKTLERSYLLK+ GK+VERPQHMLMRV+VGIH
Sbjct: 120 YEVIMANAEKLDSTIIYNRDFNYDYFGFKTLERSYLLKINGKIVERPQHMLMRVSVGIHL 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+AI+TY +MS+++FTHA+PTLFNAGTP+ Q+SSCFL+ MKDDSI+GIYDTLK+ A
Sbjct: 180 NDIDAAIETYELMSKKFFTHATPTLFNAGTPKPQMSSCFLLTMKDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYI GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIAGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWHADIF+FLDL+KNHGKEE RARDLFYA+W+ DLFM+RV+++ W+L CPNE PGL
Sbjct: 300 VEPWHADIFDFLDLKKNHGKEEMRARDLFYAMWISDLFMKRVEADANWTLMCPNECPGLY 359
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EF+ LY YE GK +K ++A+ LW +IL+SQIETGTPYML+KD N+KSNQ+NL
Sbjct: 360 DVYGDEFDALYESYESAGKGRKTIKARELWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++YTS E AVCNLASI+LP ++ +N F
Sbjct: 420 GTIRSSNLCTEILEYTSEDEIAVCNLASISLPMFI--------------------ENGQF 459
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+ + L +VT +T NLN++ID NYYPVE A SN+RHRP+G+GVQGLAD FI+L MPF S
Sbjct: 460 NHDHLYKVTKRITRNLNRVIDRNYYPVEEAYNSNMRHRPVGLGVQGLADAFIMLRMPFTS 519
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSD---R 597
EA+QLN++IFETIY+ A+ S E+A EGPY T+ GSP+S+G Q +MWG+ SD R
Sbjct: 520 DEAKQLNQEIFETIYFAAVTASMELAKEEGPYSTFKGSPISQGEFQYNMWGLQDSDLSGR 579
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + ++GVRNSLL+APMPTASTSQILGNNE FEPYTSN+Y+RRVLSGEF+VVN
Sbjct: 580 WDWSSLRKEVMEHGVRNSLLLAPMPTASTSQILGNNEAFEPYTSNLYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
KHLL DL E+G+W+ +K +I+ ++GS+Q I IP+++K +Y+TVWE+ + ++DM+ R
Sbjct: 640 KHLLQDLVELGIWNEELKQEIMRNNGSIQNIAGIPQDIKDLYRTVWEMSMRDIIDMSRQR 699
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
G +ID SQSLN+ M+ KL S+HF+AW GLKTGMYYLR++AAA+A++FTV
Sbjct: 700 GYFIDQSQSLNLFMEGATIAKLNSMHFYAWKSGLKTGMYYLRTKAAANALQFTVAKKQES 759
Query: 778 ENPKVTDDDDAKMAQMVCSLTNR------EECMACGS 808
E P+V + A+ ++ R E+C CGS
Sbjct: 760 E-PEVVQVEQEMTAEEFRAMIERSKNAGPEDCEMCGS 795
>gi|66810005|ref|XP_638726.1| ribonucleotide reductase large subunit [Dictyostelium discoideum
AX4]
gi|74854399|sp|Q54Q71.1|RIR1_DICDI RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleotide reductase large subunit
gi|60467345|gb|EAL65376.1| ribonucleotide reductase large subunit [Dictyostelium discoideum
AX4]
Length = 870
Score = 1096 bits (2834), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/791 (64%), Positives = 633/791 (80%), Gaps = 17/791 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLK---KLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLD 57
MYVVKRDG +E V FDKIT+R+ ++ L+ + DP+ V+QKV +GV+ GV T++LD
Sbjct: 16 MYVVKRDGTKENVSFDKITSRISFLCEMEPKLNSDIVDPIEVAQKVVSGVFPGVKTTELD 75
Query: 58 ELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIA 117
LAAETAA M+T HPDY LAARI VSNLHK T KSF ET+K Y N +S L APL++
Sbjct: 76 NLAAETAAYMSTRHPDYGILAARISVSNLHKQTSKSFVETVKKQYEFINPKSNLLAPLVS 135
Query: 118 DDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVG 177
++Y+I+MK+ RL+S I Y RDFDYD+FGFKTLERSYL ++ GK+VERPQHMLMRV++G
Sbjct: 136 KELYEIVMKHGERLESVIDYYRDFDYDFFGFKTLERSYLHRINGKIVERPQHMLMRVSIG 195
Query: 178 IHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKE 237
IH +D++SAI TY +S++ FTHA+PTLFNAGTP Q+SSCFLV MK+DSI+GIYDTLK+
Sbjct: 196 IHGEDLESAINTYKRLSEKLFTHATPTLFNAGTPSPQMSSCFLVQMKEDSIDGIYDTLKQ 255
Query: 238 CAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAF 297
CA+ISKSAGGIG++VH IRA SYIRGTNGTSNG+VPMLRVFNDTARYVDQGGGKRKGAF
Sbjct: 256 CALISKSAGGIGIAVHKIRAAQSYIRGTNGTSNGLVPMLRVFNDTARYVDQGGGKRKGAF 315
Query: 298 AVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAP 357
AVYLEPWHAD+FEF+DL+KN GKEE RARDLFYALWV D+FMERV+ NG W+LFCPNEAP
Sbjct: 316 AVYLEPWHADVFEFIDLKKNTGKEEMRARDLFYALWVSDIFMERVEQNGDWALFCPNEAP 375
Query: 358 GLADCWGTEFERLYTKYEKEGK-AKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSN 416
GLA+ E LY KYE ++V++AQ LWF I++SQ+ETGTP++L+KD CN KSN
Sbjct: 376 GLAETHSEEHRALYLKYEATPDLPRRVIKAQELWFAIMESQVETGTPFILYKDACNAKSN 435
Query: 417 QQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSK 476
Q+NLGTI SSNLCTE+IQYTSP E AVCNLASIALP++VR+ VGS K
Sbjct: 436 QKNLGTISSSNLCTEIIQYTSPDEIAVCNLASIALPKFVRQK-----------VGSTDPK 484
Query: 477 NRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGM 536
+ FD + L E+T ++T NLN IID NYYPV A+ SNLRHRPIGIG+QGLAD FI + M
Sbjct: 485 EKEFDHQFLFEITKLITVNLNVIIDRNYYPVAEAKTSNLRHRPIGIGIQGLADVFIKMRM 544
Query: 537 PFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSD 596
PFDS A +LN +I ETIY+ AL S E+A R+G YE++ GSP SKGILQ DMW V PS
Sbjct: 545 PFDSVAAAKLNVEIAETIYFAALTASHELAIRDGTYESFKGSPASKGILQFDMWNVTPSS 604
Query: 597 RWDWGGLRD-MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVV 655
RW+W L+D +++K G+RNSLL+APMPTASTSQILGNNECFEPYTSNIYSRRVL+GEF +
Sbjct: 605 RWNWAELKDNIVNKGGLRNSLLIAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFTI 664
Query: 656 VNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAV 715
VNK LL DL E+G+WSP +KN+I+ GS+Q I IP++LK +YKTVWEI+Q+TL+DMA
Sbjct: 665 VNKQLLEDLMELGIWSPEMKNQIVAARGSIQSIGGIPDDLKELYKTVWEIRQRTLIDMAA 724
Query: 716 DRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
DRG +ID SQS N+ + +P F KLTS+HF++W +GLKTGMYYLR+R AADAI+FTVD +
Sbjct: 725 DRGAFIDQSQSFNVFIAEPTFAKLTSMHFYSWKKGLKTGMYYLRTRPAADAIQFTVD-PI 783
Query: 776 LKENPKVTDDD 786
+ + PK +++
Sbjct: 784 VSQTPKPVENN 794
>gi|225012155|ref|ZP_03702592.1| ribonucleoside-diphosphate reductase, alpha subunit [Flavobacteria
bacterium MS024-2A]
gi|225003710|gb|EEG41683.1| ribonucleoside-diphosphate reductase, alpha subunit [Flavobacteria
bacterium MS024-2A]
Length = 814
Score = 1095 bits (2833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/785 (64%), Positives = 635/785 (80%), Gaps = 24/785 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG++E + FDKITAR++KL+YGL+ DPV V+ +V G+Y GVTTS+LD LA
Sbjct: 1 MFVLKRDGRKEPIMFDKITARIRKLNYGLN-PLVDPVRVAMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA MTT HPDYA LAARI VSNLHKNTKKSFSET+ D+Y + N R+G KAPL++D+V
Sbjct: 60 AEIAATMTTTHPDYAKLAARISVSNLHKNTKKSFSETMTDLYKYVNPRTGKKAPLLSDEV 119
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+DII KNA +LDS IIY+RDF YD+FGFKTLERSYLLK+ G +VERPQHMLMRV++GIH
Sbjct: 120 HDIIQKNADKLDSSIIYNRDFGYDFFGFKTLERSYLLKLNGVIVERPQHMLMRVSIGIHL 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI++A++TY +MS+R+FTHA+PTLFN+GTP+ Q+SSCFL+ MKDDSI+GIYDTLK+ A
Sbjct: 180 EDIEAALETYELMSKRYFTHATPTLFNSGTPKPQMSSCFLLTMKDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYI GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIAGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWHADIF+FL+L+KNHGKEE RARDLFYA+W PDLFM+RV+ N W+L CPNE P L
Sbjct: 300 VEPWHADIFDFLELKKNHGKEEMRARDLFYAMWTPDLFMKRVEENADWTLMCPNECPDLY 359
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ G EF+ +Y KYE EG+ ++ ++A+ LW +IL+SQIETGTPYML+KD N+KSNQ+NL
Sbjct: 360 NVHGDEFDAMYLKYESEGRGRRTIKARELWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++YT+P E AVCNLASIALP +V K+ F
Sbjct: 420 GTIRSSNLCTEIMEYTAPDEVAVCNLASIALPMFV--------------------KDGAF 459
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D + L +VT VT+NLN++ID NYYPV A+ SN RHRP+G+GVQGLAD FI+L +PF S
Sbjct: 460 DHQALYDVTVRVTKNLNRVIDRNYYPVIEAQNSNFRHRPVGLGVQGLADAFIMLRLPFTS 519
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP---SDR 597
EA++LN++IFET+Y+ A+ SSE A REGPYETY GSP++ G Q ++WG+ S R
Sbjct: 520 DEAKKLNQEIFETLYFAAVTASSEEAKREGPYETYKGSPIANGEFQHNLWGIKDEELSGR 579
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + K GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWAALRKTVKKQGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
KHLL DL + GLW+ +K +++ ++GSVQ I IPE+LK +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLEDLVDRGLWNEDMKQELMRNNGSVQSIEGIPEDLKELYKTVWEMSMKDIIDMSRQR 699
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
G +ID SQSLN+ M+ KLTS+HF+ W GLKTGMYYLR+++A DAIKFT+DT
Sbjct: 700 GYFIDQSQSLNLFMEGATMAKLTSMHFYGWKSGLKTGMYYLRTKSAVDAIKFTLDTKSKA 759
Query: 778 ENPKV 782
+ P+V
Sbjct: 760 KVPEV 764
>gi|372209391|ref|ZP_09497193.1| ribonucleoside-diphosphate reductase subunit alpha
[Flavobacteriaceae bacterium S85]
Length = 793
Score = 1095 bits (2833), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/812 (62%), Positives = 651/812 (80%), Gaps = 23/812 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG +E+V FDKITAR++K+ YGL+ DPV V+ +V G+Y GVTTS+LD LA
Sbjct: 1 MYVIKRDGHKESVMFDKITARIRKICYGLN-PIVDPVKVAMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA MTT HPDYA LAARI VSNLHKNTKKSFS+T+ ++Y + N R+GL++PL++D+V
Sbjct: 60 AEIAATMTTAHPDYAKLAARISVSNLHKNTKKSFSKTMSELYGYVNPRTGLESPLLSDEV 119
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y +I NAA LDS I+YDRDF+YD+FGFKTLERSYLLK+ GK+ ERPQHMLMRVAVGIH
Sbjct: 120 YKVIQDNAALLDSAIVYDRDFNYDFFGFKTLERSYLLKINGKIAERPQHMLMRVAVGIHL 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI+ AI+TY++MS+++FTHA+PTLFN+GTP+ Q+SSCFL+ M+DDSI+GIYDTLK+ A
Sbjct: 180 NDIEEAIETYNLMSKKFFTHATPTLFNSGTPKPQMSSCFLLQMQDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HNIRATGSYIRGTNGTSNGI+PML+V+NDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNIRATGSYIRGTNGTSNGIIPMLKVYNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWHADIF+FLDLRKN G EE RARDLF ALW+ DLFM+RV+ NG W+L CPNE PGL
Sbjct: 300 IEPWHADIFDFLDLRKNTGAEEKRARDLFLALWISDLFMKRVEENGDWTLMCPNECPGLY 359
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LYT+YE +GK +K ++A+ LW ++L++QIETG PYML+KD N+KSNQ+NL
Sbjct: 360 DTYGEEFEALYTQYEAQGKGRKTIKARELWEKVLEAQIETGNPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G I+SSNLCTE+++YT+ E AVCNLASIA+P +V ++G K YF
Sbjct: 420 GVIRSSNLCTEIMEYTAKDEVAVCNLASIAIPMFVE-------------TNNKGEK--YF 464
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+ +KL +V VT NL+ +ID NYYPV+ A SN+RHRP+G+G+QGLAD FI+L +PF S
Sbjct: 465 NHDKLYKVVKKVTRNLDTVIDRNYYPVKEAENSNMRHRPVGLGIQGLADAFIMLRLPFTS 524
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP---SDR 597
EA+ LNKDIFET+Y+ A+ +S EIA+++G Y T+ GSP+S+G Q ++WGV S R
Sbjct: 525 DEAKALNKDIFETLYFAAVESSMEIASKKGAYSTFEGSPMSQGEFQFNLWGVKDEELSGR 584
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR+ + KNGVRNSLLVAPMPTASTSQILGNNE FEPYTSNIY+RRVLSGEF+VVN
Sbjct: 585 WDWATLREQVKKNGVRNSLLVAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 644
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
KHLL DL E+GLW+ +K +++ +GS+Q I IP +LK +YKTVWE+ K ++DM+ R
Sbjct: 645 KHLLEDLVELGLWNNDLKEELMRANGSIQHIEGIPADLKELYKTVWELSMKDIIDMSRQR 704
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
G +ID SQSLN+ M+ PN+ KLTS+HF+AW GLKTGMYYLR+++A +AIKFT+ +
Sbjct: 705 GYFIDQSQSLNLFMESPNYSKLTSMHFYAWKSGLKTGMYYLRTKSAVNAIKFTLSNDKKQ 764
Query: 778 EN-PKVTDDDDAKMAQMVCSLTNREECMACGS 808
E+ P T++ A M Q S N ++C CGS
Sbjct: 765 EDKPMSTEEFKAMMLQ---SKENPDDCEMCGS 793
>gi|399925485|ref|ZP_10782843.1| Ribonucleoside-diphosphate reductase, alpha subunit [Myroides
injenensis M09-0166]
Length = 794
Score = 1095 bits (2832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/815 (63%), Positives = 643/815 (78%), Gaps = 28/815 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDG++E V FDKIT R++ L Y L+ E DPV V+ +V G+Y GV+TS+LD LA
Sbjct: 1 MYVVKRDGRREPVMFDKITDRIRILCYELN-ELVDPVKVAMRVIEGLYDGVSTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA+MT +HPDYA LAARI VSNLHKNTKK FSE + D+YN+ N R+ +APLIADDV
Sbjct: 60 AETAASMTVSHPDYALLAARIAVSNLHKNTKKVFSEVVDDLYNYINPRTNQEAPLIADDV 119
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y +I NA RLDS IIY RDF+YDYFGFKTLERSYLLK+ G++VERPQHMLMRVAVGIH
Sbjct: 120 YKVIKDNAERLDSTIIYQRDFNYDYFGFKTLERSYLLKLNGQIVERPQHMLMRVAVGIHL 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDIDS I+TY +MS+++FTHA+PTLFN+GTP+ Q+SSCFL+ MKDDSIEGIYDTLK+ A
Sbjct: 180 DDIDSVIETYELMSKKFFTHATPTLFNSGTPKPQMSSCFLLTMKDDSIEGIYDTLKQTAN 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIFEF++LRKNHGKEE RARDLF ALW+ DLFM+RV+++ W+L CPNE PGL
Sbjct: 300 LEPWHADIFEFIELRKNHGKEEMRARDLFLALWLNDLFMKRVEADDKWTLMCPNECPGLC 359
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE+LY YE GK ++ ++A+ LW IL++QIETGTPYML+KD N KSNQ+NL
Sbjct: 360 DVYGDEFEKLYISYENAGKGRRTIKARELWEAILEAQIETGTPYMLYKDAANAKSNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G I+SSNLCTE+++YTSP E AVCNLASI+LP ++ +N F
Sbjct: 420 GVIRSSNLCTEIMEYTSPDEVAVCNLASISLPMFI--------------------ENGEF 459
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+ + L +VT +T NLN++ID NYYPVE AR SN++HRP+G+GVQGLAD FI+L +PF +
Sbjct: 460 NHQFLYDVTKRITRNLNRVIDRNYYPVEEARNSNMKHRPVGLGVQGLADAFIMLRLPFTN 519
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP---SDR 597
A++LNKDIFETIY+ A+ S E+A EGPY T+ GSP+SKG Q ++WG+N S R
Sbjct: 520 DAAKKLNKDIFETIYFAAVTASMELAIEEGPYSTFEGSPISKGEFQFNLWGINDDELSGR 579
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + ++GVRNSLL+APMPTASTSQILGNNE FEPYTSNIY+RRVLSGEF++VN
Sbjct: 580 WDWNELRRKVIEHGVRNSLLLAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIIVN 639
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
KHLL DL E+GLW+ +K +I+ +GS+Q I IP +++ +YKTVWE+ K ++DMA +R
Sbjct: 640 KHLLKDLVELGLWNEDLKQEIMRANGSIQHIDYIPADIRELYKTVWELSMKDIIDMAKER 699
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
G +ID SQSLN+ M+ N+ KLTS+HF+AW GLKTGMYYLR+++A DAIKFT+D
Sbjct: 700 GYFIDQSQSLNLFMEGANYAKLTSMHFYAWKSGLKTGMYYLRTKSAVDAIKFTLDNQKKI 759
Query: 778 ENPKVTDDDDAKMAQMV----CSLTNREECMACGS 808
+N V + + + M+ + N ++C CGS
Sbjct: 760 QNVIVEEINQDEYRTMIEKSRLASENDDDCEMCGS 794
>gi|71020483|ref|XP_760472.1| hypothetical protein UM04325.1 [Ustilago maydis 521]
gi|46100377|gb|EAK85610.1| hypothetical protein UM04325.1 [Ustilago maydis 521]
Length = 1117
Score = 1095 bits (2832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/778 (64%), Positives = 625/778 (80%), Gaps = 18/778 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
+YV KRDG++E V FDK+TAR+ KL YGL + DP+ +++KV G+Y+GVTT +LD LA
Sbjct: 233 IYVYKRDGRKEVVKFDKVTARISKLCYGLDQNYVDPIEITRKVIEGIYEGVTTVELDNLA 292
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA TT HPDYA LAARI +SNLHK T K+FS+ ++ +Y + N ++G +P+I+D
Sbjct: 293 AETAAYKTTTHPDYAVLAARIAISNLHKETSKNFSQVVQALYEYVNPKNGRHSPMISDAT 352
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y ++M++ +LDS IIY+RDF Y++FGFKTLERSYLL++ GKV ERPQHMLMRVAVGIH
Sbjct: 353 YKVVMEHKDQLDSAIIYERDFHYNFFGFKTLERSYLLRINGKVAERPQHMLMRVAVGIHG 412
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI+SAI+TY++MSQ++FTHASPTLFNAGTP QLSSCFLV MKDDSI+GIYDTLK CA+
Sbjct: 413 QDIESAIETYNLMSQKYFTHASPTLFNAGTPHPQLSSCFLVTMKDDSIDGIYDTLKTCAM 472
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+++H IR TGSYI GTNG SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 473 ISKTAGGIGLNIHCIRGTGSYIAGTNGVSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 532
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWH+D+FEFLDLRKNHGKEE RAR+LFYALWVPDLFM+RV+ NG WSL CPNE PGLA
Sbjct: 533 IEPWHSDVFEFLDLRKNHGKEEVRARELFYALWVPDLFMKRVEQNGDWSLMCPNECPGLA 592
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EFERLY +YE EG++K+ V+AQ LW+ IL+SQ ETG P++L+KD N+KSNQ+NL
Sbjct: 593 DCYGDEFERLYERYEAEGRSKRTVKAQKLWYAILESQTETGNPFILYKDAANRKSNQKNL 652
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+I+Y++P E AVCNLASIALP ++ + + +
Sbjct: 653 GTIKCSNLCTEIIEYSAPDEVAVCNLASIALPTFIDPV------------------TKTY 694
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF++L V + +NLNKIID+NYYPVE AR+SN+RHRPIGIGVQGLAD F+++G F+S
Sbjct: 695 DFKRLHSVAKAICKNLNKIIDINYYPVEEARKSNMRHRPIGIGVQGLADAFMIMGYAFES 754
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LN IFETIY+ AL S E+A + G YETY GSP S+G LQ DMWGV PSD WDW
Sbjct: 755 AEARRLNVQIFETIYHAALERSCELAEQHGSYETYAGSPASQGELQYDMWGVTPSDLWDW 814
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+K+G+RNSLL+APMPTASTSQILG NECFEPYTSNIYSRRVL+GEF VVN L
Sbjct: 815 AELKAKIAKHGLRNSLLLAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQVVNPWL 874
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L +L E GLW+ +KN+II GS+Q +P IP+ +K +YKTVWEI QK ++DMA DRG +
Sbjct: 875 LRELVEQGLWNDTMKNRIIAHGGSIQNVPGIPDRIKKLYKTVWEISQKAIIDMAADRGAF 934
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE 778
I SQSLNIH+ P FG+LTS+HF+ W +GLKTG YYLR++ A++AI+FT+ + + E
Sbjct: 935 ICQSQSLNIHLSAPTFGQLTSMHFYGWKKGLKTGTYYLRTKPASNAIQFTLSVAEVNE 992
>gi|389740180|gb|EIM81371.1| ribonucleotide reductase alpha subunit [Stereum hirsutum FP-91666
SS1]
Length = 923
Score = 1095 bits (2832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/783 (64%), Positives = 624/783 (79%), Gaps = 20/783 (2%)
Query: 2 YVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAA 61
YV KR G++E V FDKITAR+ KL YGL H +P V+QKV GVY+GVTTS+LD LAA
Sbjct: 17 YVFKRGGRKERVQFDKITARISKLCYGLDNSHIEPAEVAQKVIQGVYQGVTTSELDNLAA 76
Query: 62 ETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVY 121
ETAA +TT HPDYA LAARI VSNLHK+TKK+FS I D+YN+ N ++G A +I+D+ Y
Sbjct: 77 ETAAYLTTKHPDYAILAARIAVSNLHKDTKKNFSHVIADLYNYVNPKTGKAAGMISDETY 136
Query: 122 DIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKD 181
I +NA RLDS IIY+RDF+Y++FGFKTLERSYLLK+ G+ ERPQHM+MRVA GIH
Sbjct: 137 RFISENAERLDSAIIYERDFNYNFFGFKTLERSYLLKINGRTAERPQHMIMRVACGIHGH 196
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAII 241
D++ AI+TY++MS+R+FTHASPTLFNAGTP QL+SCFLVCMKDDSIEGIYDTLK+CA+I
Sbjct: 197 DVERAIETYNLMSERYFTHASPTLFNAGTPHPQLASCFLVCMKDDSIEGIYDTLKQCAMI 256
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SK+AGGIG+S+HNIRATG+YI GTNG SNGIVPMLR F+ TARYVDQGG KR GAFA+Y+
Sbjct: 257 SKTAGGIGLSIHNIRATGAYIAGTNGYSNGIVPMLRAFDATARYVDQGGNKRPGAFAIYI 316
Query: 302 EPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLAD 361
EPWHAD+FEFLDLRKNHGKEE RARDLFYALW+PDLFM+R+ NG W+LF +EAPGL +
Sbjct: 317 EPWHADVFEFLDLRKNHGKEEVRARDLFYALWIPDLFMKRISENGNWTLFSADEAPGLHE 376
Query: 362 CWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG 421
+G EFE LY KYEKEG+ +K + AQ LW+ I+ +QIETG P+M +KD N+KSNQ+NLG
Sbjct: 377 VYGDEFEALYEKYEKEGRGRKTMPAQKLWYAIMDAQIETGGPFMCYKDAANRKSNQKNLG 436
Query: 422 TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFD 481
IKSSNLCTE+++Y++P ETAVCNLAS+ALP ++ N ++
Sbjct: 437 VIKSSNLCTEIMEYSAPDETAVCNLASLALPTFI--------------------DNGIYN 476
Query: 482 FEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDST 541
F+KL +V +VT NLN++IDVNYYPV AR SN+RHRPIG+GVQGLAD F++L M FDS
Sbjct: 477 FQKLHDVAKVVTYNLNRVIDVNYYPVPEARNSNMRHRPIGLGVQGLADAFMILRMAFDSD 536
Query: 542 EAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWG 601
A++LN+ IFETIY+ A+ S EIA EGPYE+Y GSP SKG LQ DMWGV P+D WDW
Sbjct: 537 AARKLNQQIFETIYHAAVEASCEIAEEEGPYESYEGSPASKGELQYDMWGVTPTDLWDWE 596
Query: 602 GLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
L+ ++++G+RNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VV LL
Sbjct: 597 ELKAKVAQHGLRNSLLVAPMPTASTSQILGFNECFEPYTSNIYTRRVLAGEFQVVCPWLL 656
Query: 662 HDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYI 721
+L E+ LW +KNKII +GS+Q IP+IP+++KAIYKTVWEI QK ++D+A DRG +I
Sbjct: 657 RELVELKLWDDDMKNKIIAHNGSIQAIPEIPDDVKAIYKTVWEISQKKVLDLAADRGAFI 716
Query: 722 DHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPK 781
SQSLN+H+ P +LTS+HF+ W +GLKTGMYYLR+R AA AI+FT+D ++++ K
Sbjct: 717 CQSQSLNVHLQSPTVNQLTSMHFYGWKKGLKTGMYYLRTRPAAQAIQFTLDHKLVEQTKK 776
Query: 782 VTD 784
D
Sbjct: 777 AQD 779
>gi|374288409|ref|YP_005035494.1| putative ribonucleoside-diphosphate reductase 1 subunit alpha
[Bacteriovorax marinus SJ]
gi|301166950|emb|CBW26529.1| putative ribonucleoside-diphosphate reductase 1 subunit alpha
[Bacteriovorax marinus SJ]
Length = 785
Score = 1095 bits (2831), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/809 (62%), Positives = 646/809 (79%), Gaps = 25/809 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+ R G++E + FDKIT R++ L++ L E DP L++ KV G++ G++T +LD+LA
Sbjct: 1 MYVITRSGEREPIKFDKITERIESLAFDLDKEFIDPSLITSKVIEGIFDGISTPELDKLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
ETAA ++T HPDY+ LA RI VSNLHK T+ FSE IK+MYN+ N +G APLI+ ++
Sbjct: 61 GETAAYLSTQHPDYSKLAGRIAVSNLHKETRGCFSENIKEMYNYVNPATGEMAPLISKEL 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+++M+NA LD+ + RDF+YDYFGFKTLERSYLLK+ GK+ ERP MLMRV+VGIH
Sbjct: 121 YEVVMENAEMLDTAVDDKRDFNYDYFGFKTLERSYLLKMDGKITERPGQMLMRVSVGIHM 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+D+ +AI+TY++MS+++FTHASPTLFN+GT + QLSSCFL+ MKDDSIEGIYDTLK+ A+
Sbjct: 181 NDMKAAIETYNLMSEKYFTHASPTLFNSGTSKPQLSSCFLLTMKDDSIEGIYDTLKQSAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HNIRA GS+I+GTNGTSNGIVPML+VFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISQSAGGIGLSIHNIRAKGSFIKGTNGTSNGIVPMLKVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+FL+++KN GK+E+RARDLFYALW+ DLFM+RV+++G+WSLFCP+E PG+A
Sbjct: 301 LEPWHADIFDFLEMKKNTGKDENRARDLFYALWISDLFMKRVEADGMWSLFCPHECPGMA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ +G EFE LYTKYE EGKAKKVV+AQ+LWF +L+SQIETG+PYML+KD+ N+KSNQ+NL
Sbjct: 361 ETYGAEFEALYTKYESEGKAKKVVRAQDLWFAVLESQIETGSPYMLYKDSINEKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+++YT+P E AVCNLASIAL +V E + +
Sbjct: 421 GTIKSSNLCTEIMEYTAPDEVAVCNLASIALNMFVDE------------------ATKTY 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D +KL +V T NLN+IID+NYYPV A+ SN+RHRPIG+GVQGLADTF + F+S
Sbjct: 463 DHKKLYDVVYRATLNLNRIIDINYYPVPEAKNSNMRHRPIGLGVQGLADTFFKMRYDFES 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDR-WD 599
EA +LN IFETIY+ AL S ++A ++G YETY GSP+S+G Q DMWGV PS + WD
Sbjct: 523 PEALELNNQIFETIYFAALSASKDLAMKDGAYETYEGSPMSQGQFQFDMWGVTPSAKNWD 582
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR ++++GVRNSLLVAPMPTASTSQILGNNECFEP TSNIY RRVLSGEF VVNK
Sbjct: 583 WSALRKEVAEHGVRNSLLVAPMPTASTSQILGNNECFEPITSNIYVRRVLSGEFAVVNKF 642
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
L++DL GLW ++N+II ++GS+Q I +IPEELK +YKTVWEI QKT+++M+ R
Sbjct: 643 LVNDLIRAGLWDDKMRNEIIANNGSIQAIERIPEELKGLYKTVWEISQKTVINMSAGRAP 702
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN 779
YID QSLNIHM +PNFGKL+S+HF+AW GLKTGMYYLR+RAA +A++FTV +
Sbjct: 703 YIDQGQSLNIHMQEPNFGKLSSMHFYAWKAGLKTGMYYLRARAAVNAVQFTVKN----DT 758
Query: 780 PKVTDDDDAKMAQMVCSLTNREECMACGS 808
PKV +D A MVCS+ N ++C+ CGS
Sbjct: 759 PKVNKED--AQAAMVCSIENPDDCVMCGS 785
>gi|341877710|gb|EGT33645.1| CBN-RNR-1 protein [Caenorhabditis brenneri]
Length = 786
Score = 1093 bits (2828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/797 (64%), Positives = 637/797 (79%), Gaps = 21/797 (2%)
Query: 2 YVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAA 61
YVVKRDG+ E VHFDKIT+R++KLSYGL++E DPV V+ KV +G+YKGVTT +LD LAA
Sbjct: 8 YVVKRDGRSEDVHFDKITSRIQKLSYGLNMEFVDPVAVAIKVISGLYKGVTTVELDNLAA 67
Query: 62 ETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVY 121
ETAA+MTT HP+YA LAARI VSNLHK T K FSE ++ ++N ++ +G AP+I+D+ +
Sbjct: 68 ETAASMTTQHPEYALLAARIAVSNLHKKTNKVFSEVMRTLHNFHHPHTGKHAPMISDETW 127
Query: 122 DIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKD 181
II KNA +L+S I+YDRD+ Y YFGFKTLERSYLLK+ +VVERPQ MLMRVA+GIH +
Sbjct: 128 AIIEKNADKLNSAIVYDRDYSYTYFGFKTLERSYLLKINKEVVERPQQMLMRVAIGIHGN 187
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAII 241
DI +AI+TY++MS+R+ THASPTLFN+GT R Q+SSCFL+ M +DSI GIYDTLK+CA+I
Sbjct: 188 DIAAAIETYNLMSERYMTHASPTLFNSGTCRPQMSSCFLLTMSEDSILGIYDTLKQCALI 247
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SKSAGGIG++VH IRATGS I GTNGTSNG++PMLRV+N+TARYVDQGG KR GAFA+YL
Sbjct: 248 SKSAGGIGLNVHKIRATGSVIAGTNGTSNGLIPMLRVYNNTARYVDQGGNKRPGAFAIYL 307
Query: 302 EPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLAD 361
EPWHAD+FEF+ LRKN G EE RARDLF ALWVPDLFM+RV+ + WSL CP E PGL D
Sbjct: 308 EPWHADVFEFVALRKNTGPEEERARDLFLALWVPDLFMKRVEKDQDWSLMCPCECPGLDD 367
Query: 362 CWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG 421
CWG EFE+LYT+YE EG+ +KVV+A+ LW I+ +QIETG PY+ +KD N+KSNQQNLG
Sbjct: 368 CWGEEFEKLYTRYEAEGRFRKVVKARKLWEHIVSNQIETGLPYITYKDAANRKSNQQNLG 427
Query: 422 TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFD 481
TIK SNLCTE+I+Y++P E AVCNLASIAL R+V + + FD
Sbjct: 428 TIKCSNLCTEIIEYSAPDEIAVCNLASIALNRFV-------------------TPEKTFD 468
Query: 482 FEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDST 541
F+KLAEVT ++T+NLNKIIDVNYYPVE AR SN+RHRPIG+GVQGLAD F+L+ PF S
Sbjct: 469 FKKLAEVTKVITKNLNKIIDVNYYPVEEARNSNMRHRPIGLGVQGLADCFMLMRFPFTSE 528
Query: 542 EAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWG 601
A+ LNK IFETIYY AL S E+A ++GPY TY GSPVSKG LQ DMWGV P+D+ +W
Sbjct: 529 GARDLNKRIFETIYYAALEASCELAEKDGPYSTYQGSPVSKGQLQFDMWGVTPTDQCNWN 588
Query: 602 GLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
LR I+K+GVRNSLL+APMPTAST+QILGNNE EPYTSNIYSRRVLSG+F +VN H+L
Sbjct: 589 ALRQKIAKHGVRNSLLMAPMPTASTAQILGNNESIEPYTSNIYSRRVLSGDFQIVNPHML 648
Query: 662 HDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYI 721
DL E GLWS +KN++I ++GS+Q IP IP+++K +Y+TVWEI QK +++MA DRG +I
Sbjct: 649 KDLVERGLWSDEMKNRLIANNGSIQNIPGIPDDIKELYRTVWEISQKEIIEMAADRGAFI 708
Query: 722 DHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPK 781
D SQSLNIHM +P++ +TS+HF+ W +GLKTGMYYLR++ A +A++FTVD S LK K
Sbjct: 709 DQSQSLNIHMAKPSYAGITSMHFYGWKKGLKTGMYYLRTKPAVNAVQFTVDKSALKTPSK 768
Query: 782 --VTDDDDAKMAQMVCS 796
V ++ ++CS
Sbjct: 769 QEVAKEEPQDEGCVMCS 785
>gi|50305185|ref|XP_452551.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641684|emb|CAH01402.1| KLLA0C07887p [Kluyveromyces lactis]
Length = 875
Score = 1093 bits (2828), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/778 (64%), Positives = 630/778 (80%), Gaps = 14/778 (1%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG +E V FDKITAR+ +L YGL +H D V ++Q++ +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGHKEPVQFDKITARVSRLCYGLDAKHIDAVKITQRIISGVYEGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AET A MTT HPDYA+LAARI +SNLHK T K FS+ + D+Y N R+G+ +P+I+D+V
Sbjct: 61 AETCAYMTTIHPDYATLAARIAISNLHKQTTKQFSQVVDDLYQWVNPRTGIHSPMISDEV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y I+M N L+S I+YDRDF ++YFGFKTLERSYLL++ GKV ERPQHM+MRVAVGIH
Sbjct: 121 YKIVMDNKDTLNSAIVYDRDFQFNYFGFKTLERSYLLRIDGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI+ ++TY++MSQR+FTHASPTLFNAGTP Q+SSCFLV MK+DSIEGIYDTLKECA+
Sbjct: 181 NDIERVLETYNLMSQRYFTHASPTLFNAGTPHPQMSSCFLVAMKEDSIEGIYDTLKECAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIR+TGSYI GTNGTSNGI+PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGIIPMIRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWH+DIF+F+D+RKNHGKEE RARDLF ALW+PDLFM+RV+ N W+LF PNEAPGL
Sbjct: 301 IEPWHSDIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEKNQDWTLFSPNEAPGLP 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE +Y +YE+EG+ +K V+AQ LW+ IL++Q ETGTP+ML+KD CN KSNQ+NL
Sbjct: 361 DAYGEEFEEMYERYEREGRGRKTVKAQKLWYAILEAQTETGTPFMLYKDACNLKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLC E+++Y+ PTETAVCNLASIALP ++ S K + +
Sbjct: 421 GTIKSSNLCCEIVEYSDPTETAVCNLASIALPAFIER--------------STDGKTQTY 466
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+FEKL + ++T NLN+IID NYYPVETARRSN+RHRPI +GVQGLAD F++L +PFDS
Sbjct: 467 NFEKLHSIAKVLTRNLNRIIDRNYYPVETARRSNMRHRPIALGVQGLADAFMMLRLPFDS 526
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LN +IFETIY+ A S E+A EG YET+ GSP S+G LQ D+WG P+ WDW
Sbjct: 527 EEAKKLNIEIFETIYHGACEASMELAKEEGHYETFPGSPASQGQLQFDLWGKTPTALWDW 586
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I NG+RNSLLVAPMPTASTSQILG NECFEPYTSN+YSRRVLSGEF +VN +L
Sbjct: 587 NTLKEQIKLNGMRNSLLVAPMPTASTSQILGYNECFEPYTSNMYSRRVLSGEFQIVNPYL 646
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
LHDL ++G+W +K+ II D+GS+Q +P IP+ELK +YKTVWE+ QK ++DMA DR Y
Sbjct: 647 LHDLVDLGIWDEAMKSHIIADNGSIQNLPNIPQELKDLYKTVWELSQKHIIDMAADRAAY 706
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE 778
ID SQSLNIH+ P GKLTS+HF+ W +GLKTGMYYLR++AA+ AI+FT+D SV ++
Sbjct: 707 IDQSQSLNIHIRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDKSVAEQ 764
>gi|374596273|ref|ZP_09669277.1| ribonucleoside-diphosphate reductase, alpha subunit [Gillisia
limnaea DSM 15749]
gi|373870912|gb|EHQ02910.1| ribonucleoside-diphosphate reductase, alpha subunit [Gillisia
limnaea DSM 15749]
Length = 813
Score = 1093 bits (2827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/834 (62%), Positives = 647/834 (77%), Gaps = 47/834 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG +E V FDKITAR++KL YGL+ E DP+ V+ +V G+Y+GVTTS+LD LA
Sbjct: 1 MYVLKRDGHKEPVMFDKITARIRKLCYGLN-ERVDPLKVAMRVIEGLYEGVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE +A MTT+HPDYA LAARI VSNLHKNTKK+FSE + D+Y + N R+G KAPL+AD+V
Sbjct: 60 AEVSATMTTSHPDYAKLAARISVSNLHKNTKKNFSEVMTDLYEYVNPRTGKKAPLLADEV 119
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+ +I +N LDS IIY+RDF+YDYFGFKTLERSYLLK+ G++ ERPQHMLMRV+VGIH
Sbjct: 120 FKVIQENKELLDSTIIYNRDFNYDYFGFKTLERSYLLKLNGEIAERPQHMLMRVSVGIHL 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI+SAI+TY +MS+++FTHA+PTLFNAGTP+ Q+SSCFL+ MKDDSI+GIYDTLK+ A
Sbjct: 180 NDIESAIETYELMSKKYFTHATPTLFNAGTPKPQMSSCFLLTMKDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYI GTNGTSNGIVPML+VFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYISGTNGTSNGIVPMLKVFNDTARYVDQGGGKRKGSFAMY 299
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWHADIF+FLDL+KNHGKEE RARDLFYA+W+PDLFM+RV+ + W+L CPNE P L
Sbjct: 300 VEPWHADIFDFLDLKKNHGKEEMRARDLFYAMWIPDLFMKRVEEDAKWTLMCPNECPNLY 359
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ G EF+ LY KYE EGK +K ++A+ LW +IL+SQIETGTPYML+KD N+KSNQQNL
Sbjct: 360 NIHGDEFDALYLKYESEGKGRKTIRARELWEKILESQIETGTPYMLYKDAANRKSNQQNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE++++TSP E AVCNLASIALP ++ K + F
Sbjct: 420 GTIRSSNLCTEIMEFTSPDEIAVCNLASIALPMFI--------------------KGKEF 459
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D ++L ++T VT NLN++ID NYYPV+ A SN+RHRPIG+GVQGLADTFI L MPF S
Sbjct: 460 DHKELFKITKRVTRNLNRVIDRNYYPVKEAENSNMRHRPIGLGVQGLADTFIKLRMPFTS 519
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP---SDR 597
EA++LN++IFET+Y+ A+ S E+A EGPY T+ GSP+SKG Q ++WGV S R
Sbjct: 520 EEAKKLNQEIFETLYFAAVTASMELAQEEGPYSTFKGSPISKGQFQHNLWGVEDEELSGR 579
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + KNGVRNSLLVAPMPTASTSQILGNNE FEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWAKLRKQVVKNGVRNSLLVAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
KHLL DL E+ LW+ +K+ I+ +GSVQ I IP++LK +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLDDLVELNLWTDDVKDAIMRANGSVQDIDVIPQDLKELYKTVWELSMKDIIDMSRHR 699
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
G +ID SQSLN+ M+ N+ KLTS+HF+ W GLKTGMYYLR+++A DAIKFT+ K
Sbjct: 700 GYFIDQSQSLNLFMENANYSKLTSMHFYGWKSGLKTGMYYLRTKSAVDAIKFTLKKEQKK 759
Query: 778 E-NPKVTDDDDA--------KMAQMVCSLTNRE--------------ECMACGS 808
E P + +A K A SL+ E +C+ CGS
Sbjct: 760 EPEPAFAEPMEAPGSPSAQIKAASSNTSLSPEELRALIAQSKEAEGDDCLMCGS 813
>gi|305665629|ref|YP_003861916.1| putative ribonucleoside-diphosphate reductase large chain
[Maribacter sp. HTCC2170]
gi|88710385|gb|EAR02617.1| probable ribonucleoside-diphosphate reductase large chain
[Maribacter sp. HTCC2170]
Length = 825
Score = 1093 bits (2826), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/783 (64%), Positives = 631/783 (80%), Gaps = 24/783 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDG++E + FDKITAR++KL YGL+ DP+ V+ +V G+Y GVTTS+LD LA
Sbjct: 1 MYVVKRDGRKELIMFDKITARVRKLCYGLN-GLVDPLKVAMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA MTT HPDYA LAARI VSNLHKNTKKSFSET++D+Y + N R+G KAPL++D+V
Sbjct: 60 AEIAATMTTTHPDYAKLAARISVSNLHKNTKKSFSETMEDLYTYVNPRTGKKAPLLSDEV 119
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y +I +N+ LDS IIY+RDF YDYFGFKTLERSYLLK+ GK+ ERPQHMLMRV++GIH
Sbjct: 120 YKVIAENSVALDSTIIYNRDFGYDYFGFKTLERSYLLKLNGKIAERPQHMLMRVSIGIHL 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD+D+ +TY +MS+++FTHA+PTLFN+GTP+ Q+SSCFL+ MKDDSI+GIYDTLK+ A
Sbjct: 180 DDLDAVKETYELMSKKYFTHATPTLFNSGTPKPQMSSCFLLAMKDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYI GTNGTSNGIVPML+VFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIAGTNGTSNGIVPMLQVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWHADIFEFL+L+KNHGKEE RARDLFYA+W+ DLFM+RV++N W+L CPNE PGL
Sbjct: 300 MEPWHADIFEFLELKKNHGKEEMRARDLFYAMWISDLFMKRVEANEEWTLMCPNECPGLF 359
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
EFE+LY KYE E K +K V+A+ LW +IL+SQIETGTPYML+KD N+KSNQ+NL
Sbjct: 360 TNHSEEFEKLYLKYESENKGRKTVRARELWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++YTSP E AVCNLASIALP ++ KN F
Sbjct: 420 GTIRSSNLCTEIMEYTSPDEVAVCNLASIALPMFI--------------------KNGEF 459
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D ++L VT VT+NLNK+ID NYYPV+ A SN+RHRPIG+GVQGLAD FILL +PF S
Sbjct: 460 DHKELFRVTKRVTKNLNKVIDRNYYPVKEAENSNMRHRPIGLGVQGLADAFILLRLPFTS 519
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP---SDR 597
EA++LN++IFET+Y+ A+ S E A EG Y +Y GSP+S+G Q ++WG+ S R
Sbjct: 520 DEAKKLNQEIFETLYFAAVTASMEAAKEEGKYSSYDGSPISQGEFQHNLWGIKDEELSGR 579
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWTKLRKDVKKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
KHLL DL +G+W+ +K +++ +GS+Q I IP++++ +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLEDLVNLGMWNENMKQELMRANGSIQHIETIPQDIRDLYKTVWELSMKDIIDMSRHR 699
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
G +ID SQSLN+ M+ N+ KLTS+HF+AW GLKTGMYYLR++AA DAIKFT+D S K
Sbjct: 700 GYFIDQSQSLNLFMENANYSKLTSMHFYAWKSGLKTGMYYLRTKAAVDAIKFTLDNSKKK 759
Query: 778 ENP 780
E P
Sbjct: 760 EEP 762
>gi|297447|emb|CAA46232.1| ribonucleotide reductase, large subunit [Schizosaccharomyces pombe]
Length = 811
Score = 1092 bits (2825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/831 (62%), Positives = 645/831 (77%), Gaps = 43/831 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG+QE V FDKITAR+ +L YGL +H DPV ++QKV +GVY GVTT +LD LA
Sbjct: 1 MFVYKRDGRQEKVAFDKITARVSRLCYGLDSDHVDPVEITQKVISGVYPGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA LAARI VSNLHK T+K FS ++ ++++ N ++ AP+I+D +
Sbjct: 61 AETAATMTTKHPDYAILAARIAVSNLHKQTEKVFSTVVQQLHDYVNPKTDKPAPMISDKI 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YDI+MK+ LDS IIYDRDF Y++FGFKTLERSYLL++ GKV ERPQHM+MRVAVGIH
Sbjct: 121 YDIVMKHKDELDSAIIYDRDFTYNFFGFKTLERSYLLRIDGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI++AI+TY++MSQR+FTHASPTLFNAGTPR QLSSCFLV MKDDSIEGIYDTLK CA+
Sbjct: 181 EDIEAAIETYNLMSQRYFTHASPTLFNAGTPRPQLSSCFLVTMKDDSIEGIYDTLKMCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIRATGSYI GTNGTSNGIVPM+RV+N+TARYVDQGG KR GAFA Y
Sbjct: 241 ISKTAGGIGIYIHNIRATGSYIAGTNGTSNGIVPMIRVYNNTARYVDQGGNKRPGAFAAY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+ +FL+LRK HG E+ RAR +FYALW+PDLFM+RV+ N W+ FCPNEAPGLA
Sbjct: 301 LEPWHADVMDFLELRKTHGNEDFRARQMFYALWIPDLFMQRVERNEQWTFFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG EF LY KYEKE + ++ + AQ +W+ IL+SQ+ETG P+ML+KD+CN+KSNQ+N+
Sbjct: 361 DVWGDEFVALYEKYEKENRGRRSLPAQKVWYAILQSQVETGNPFMLYKDSCNRKSNQKNV 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++Y+SP E AVCNLAS+ALP ++ K+ +
Sbjct: 421 GTIRSSNLCTEIVEYSSPDEVAVCNLASVALPTFI--------------------KDGKY 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+F+KL +V +VT NLNKIIDVNYYPV ARRSN+RHRP+G+GVQGLAD F L +PF+S
Sbjct: 461 NFQKLHDVVKVVTRNLNKIIDVNYYPVPEARRSNMRHRPVGLGVQGLADAFFALRLPFES 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
A++LN IFETIY+ AL S EIA EG YE+Y GSP +GILQ DMW VNP+D WDW
Sbjct: 521 AGAKKLNIQIFETIYHAALEASCEIAQVEGTYESYEGSPCIQGILQYDMWNVNPTDLWDW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
++ I+K+G+RNSLLVAPMPTASTSQILG NECFEPYTSN+Y RRVLSGEF +VN L
Sbjct: 581 AEFKEKIAKHGIRNSLLVAPMPTASTSQILGFNECFEPYTSNMYQRRVLSGEFQIVNPWL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL E LW+ +KNK++ DGS+Q IP+IP++LK +YKTVWEI QKT++D A DRG +
Sbjct: 641 LKDLVERDLWNEDMKNKLVMLDGSIQAIPEIPQDLKDLYKTVWEISQKTVIDYAADRGPF 700
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK--- 777
ID SQSLNIH+ P++GK+TS+HF+ W +GLKTGMYYLR+ AA+ AIKFTVD L+
Sbjct: 701 IDQSQSLNIHLKDPSYGKITSMHFYGWKKGLKTGMYYLRTMAASAAIKFTVDPVALRARN 760
Query: 778 -----ENPK-VTDDDDAKMAQ--------------MVCSLTNREECMACGS 808
EN K V + A+++ + CS+ N E C C +
Sbjct: 761 EESNEENKKPVIKNGKAEISAEPTKEEIDIYNEKVLACSIKNPEACEMCSA 811
>gi|367017520|ref|XP_003683258.1| hypothetical protein TDEL_0H01880 [Torulaspora delbrueckii]
gi|359750922|emb|CCE94047.1| hypothetical protein TDEL_0H01880 [Torulaspora delbrueckii]
Length = 886
Score = 1092 bits (2825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/775 (64%), Positives = 629/775 (81%), Gaps = 14/775 (1%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG++E V FDKITAR+ +L YGL H D V ++Q++ +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKEHVRFDKITARISRLCYGLDPAHIDAVKITQRIISGVYEGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AET A MTT HPDYA+LAARI +SNLHK T K FS+ + +++N+ N ++G+ +P+I+ +V
Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSQVVSELFNYVNPKNGVHSPMISQEV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI+ K+ L+S I+YDRDF+++YFGFKTLERSYLL++ G+V ERPQHM+MRVAVGIH
Sbjct: 121 MDIVNKHKDELNSAIVYDRDFNFNYFGFKTLERSYLLRINGEVAERPQHMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDI+SAI+TY++MS R+F HASPTLFNAGTPR Q+SSCFL+ MKDDSIEGIYDTLKECA+
Sbjct: 181 DDIESAIETYNLMSLRYFIHASPTLFNAGTPRPQMSSCFLIAMKDDSIEGIYDTLKECAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+F+D+RKNHGKEE RARDLF ALW+PDLFM+RVQ NG W+LF P+EAPGL+
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVQENGEWTLFSPSEAPGLS 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LY +Y EG+ +K ++AQ LW+ IL+SQ ETGTP+ML+KD CN KSNQ+NL
Sbjct: 361 DVYGDEFEALYERYVAEGRGRKTIKAQKLWYAILESQTETGTPFMLYKDACNIKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLC E+++Y++P ETAVCNLASIALP ++ V G K +++
Sbjct: 421 GTIKSSNLCCEIVEYSAPDETAVCNLASIALPSCIQ-------------VADDG-KTQWY 466
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL ++ ++T NLNK+ID NYYPV AR SN+R+RP+ +GV GLAD F++L +PF+S
Sbjct: 467 DFAKLHKIAKVITRNLNKVIDRNYYPVPEARNSNMRNRPMALGVNGLADVFMMLRVPFES 526
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+ LN IFETIY+ +L S E+A ++GPY TY GSP+S+GILQ D+W PSD WDW
Sbjct: 527 QEAKDLNIQIFETIYHASLEASCELAKKDGPYSTYEGSPISQGILQYDLWNTKPSDLWDW 586
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I + GVRNSLL+APMPTASTSQILG NECFEPYTSN+YSRRVLSGEF +VN +L
Sbjct: 587 DTLKKSIKEYGVRNSLLLAPMPTASTSQILGYNECFEPYTSNMYSRRVLSGEFQIVNPYL 646
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W +K II D+GS+Q +P IP+ELK +YKTVWEI QKT+++MA DR Y
Sbjct: 647 LRDLVDLGIWDDSMKQHIITDNGSIQNLPNIPQELKDLYKTVWEISQKTIIEMAADRAVY 706
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
ID SQSLNIH+ P GKLTS+HF+ W +GLKTGMYYLR++AA+ AI+FT+D SV
Sbjct: 707 IDQSQSLNIHIRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDKSV 761
>gi|328875304|gb|EGG23669.1| ribonucleotide reductase large subunit [Dictyostelium fasciculatum]
Length = 942
Score = 1092 bits (2824), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 520/800 (65%), Positives = 626/800 (78%), Gaps = 36/800 (4%)
Query: 1 MYVVKRDGKQEAV------------------HFDKITARLK---KLSYGLSIEHCDPVLV 39
M+VVKRDG + AV +DKIT RL+ L L DP +
Sbjct: 74 MFVVKRDGTRVAVCNRPTSTQLYFYKKEIDVKYDKITTRLQYLCDLEPKLDTNIIDPSEI 133
Query: 40 SQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIK 99
+QKV +GV+ GV T++LD LAAETAA M+T HPDYA LAARI VSNLHK T +SF ET+K
Sbjct: 134 TQKVASGVFPGVKTTELDNLAAETAAYMSTKHPDYAVLAARIAVSNLHKQTHESFLETVK 193
Query: 100 DMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKV 159
+ + + ++G APL++D++ + K+ R+++ I Y RDF+YD+FGFKTLERSYL +V
Sbjct: 194 LQHGYVSPKTGAPAPLVSDEILALANKHVDRIEAAIKYTRDFEYDFFGFKTLERSYLHRV 253
Query: 160 QGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCF 219
++ERPQH+LMRV++GIH DDID+AI TY +S R+FTHA+PTLFNAGT Q+SSCF
Sbjct: 254 NDMIIERPQHLLMRVSLGIHGDDIDAAIDTYDQLSNRYFTHATPTLFNAGTNSPQMSSCF 313
Query: 220 LVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVF 279
LV MKDDSIEGIYDTLK+CA+ISKSAGGIG++VH IRA SYIRGTNGTSNG+VPMLRVF
Sbjct: 314 LVQMKDDSIEGIYDTLKQCALISKSAGGIGIAVHKIRAARSYIRGTNGTSNGLVPMLRVF 373
Query: 280 NDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFM 339
NDTARYVDQGGGKRKGAFAVYLEPWH+DIFEFLDL+KNHGKEE RARDLFYALWV DLFM
Sbjct: 374 NDTARYVDQGGGKRKGAFAVYLEPWHSDIFEFLDLKKNHGKEEMRARDLFYALWVSDLFM 433
Query: 340 ERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-EGKAKKVVQAQNLWFEILKSQI 398
ERV+ N WSLFCPNEAPGLADC+G +F LY YE+ G A+KVV+AQ+LWF I+ SQI
Sbjct: 434 ERVEQNAEWSLFCPNEAPGLADCYGDKFRDLYLSYEQTPGLARKVVKAQDLWFAIIDSQI 493
Query: 399 ETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREM 458
ETGTPY+L+KD CN+KSNQ+NLGTI+ SNLCTE+IQYTS E AVCNLASIALP++V+
Sbjct: 494 ETGTPYILYKDACNEKSNQKNLGTIQCSNLCTEIIQYTSADEVAVCNLASIALPKFVK-- 551
Query: 459 GVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHR 518
S PS + FD LAE+T I+T NLNKIID N+YPVE ARRSN+RHR
Sbjct: 552 ----RSSPSAVAS--------FDHNHLAEITRIITRNLNKIIDRNFYPVEEARRSNMRHR 599
Query: 519 PIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGS 578
P GIG+QGLAD FI L MPFDS A LNK+I ETIYY +L S ++A R+GPYET+ GS
Sbjct: 600 PTGIGIQGLADVFIALRMPFDSPAAAVLNKEIAETIYYASLDASCQLAERDGPYETFAGS 659
Query: 579 PVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
P S+GILQ DMW V PS RWDW L+ I K+G+RNSLLVAPMPTASTSQILGNNECFEP
Sbjct: 660 PASQGILQFDMWDVQPSARWDWAALKQRIVKHGLRNSLLVAPMPTASTSQILGNNECFEP 719
Query: 639 YTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAI 698
YTSNIYSR+VL+GEF VVNK LL DL +GLW+P +KN+II + GSVQ + IP++LK +
Sbjct: 720 YTSNIYSRKVLAGEFTVVNKQLLQDLMALGLWTPEMKNQIIANRGSVQNVQGIPDDLKEL 779
Query: 699 YKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYL 758
YK+ WEI+Q+TL+DMA DRG +ID SQS N+ + +PNF KLTS+HF+AW +GLKTGMYYL
Sbjct: 780 YKSAWEIRQRTLIDMAADRGAFIDQSQSFNVFIAEPNFAKLTSMHFYAWKKGLKTGMYYL 839
Query: 759 RSRAAADAIKFTVDTSVLKE 778
R+RAAADAI+FTVD +L +
Sbjct: 840 RTRAAADAIQFTVDQQMLTQ 859
>gi|156838441|ref|XP_001642926.1| hypothetical protein Kpol_411p13 [Vanderwaltozyma polyspora DSM
70294]
gi|156113506|gb|EDO15068.1| hypothetical protein Kpol_411p13 [Vanderwaltozyma polyspora DSM
70294]
Length = 883
Score = 1092 bits (2823), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/775 (63%), Positives = 627/775 (80%), Gaps = 14/775 (1%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG++E V FDKITAR+ +L YGL H DPV V+Q++ TGVY+GVTT +LD LA
Sbjct: 1 MYVIKRDGREEPVRFDKITARISRLCYGLDPNHIDPVKVTQRIITGVYEGVTTYELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA LAAR+ VSNLHK T K FS+ I +++++ N + APLI+ DV
Sbjct: 61 AETAAYMTTVHPDYAVLAARLAVSNLHKQTTKVFSKVIDELHHYVNPENNKPAPLISKDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YD +M N L+S I+YDRDF+Y+YFGFKTLERSYLL+++GKV ERPQHM+MRVA+GIH
Sbjct: 121 YDTVMANKDELNSAIVYDRDFNYNYFGFKTLERSYLLRMKGKVAERPQHMVMRVAIGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI +AI++Y++MSQR+FTHASPTLFNAGTPR Q+SSCFLV MKDDSIEGIYDTLKECA+
Sbjct: 181 NDIKAAIESYNLMSQRYFTHASPTLFNAGTPRPQMSSCFLVAMKDDSIEGIYDTLKECAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIRATGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GA A+Y
Sbjct: 241 ISKTAGGIGLHIHNIRATGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAMALY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+F+D+RKNHGKEE RARDLF ALW+PDLFM+RV+ N W+LF P+EAPGL
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEENADWTLFSPSEAPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ +G EFE LY +Y +EG+ KK ++AQ LW+ IL++Q ETGTP+ML+KD CN KSNQ+NL
Sbjct: 361 EVYGEEFEALYNRYVEEGRGKKTIKAQKLWYSILEAQTETGTPFMLYKDACNLKSNQRNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLC E+++Y++P ETAVCNLASIALP ++ + S+ K ++
Sbjct: 421 GTIKSSNLCCEIVEYSAPDETAVCNLASIALPAFIEK--------------SKDEKQSFY 466
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+F+KL ++ +VT NLN++ID NYYPV+ A+ SN RHRPI +GVQGLAD F+LL +PF+S
Sbjct: 467 NFKKLHDIAKVVTRNLNRVIDRNYYPVQEAKNSNFRHRPIALGVQGLADAFMLLRIPFES 526
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LN IFET+Y+ AL S E+A EG Y+T+ GSP S+GILQ DMW P+D WDW
Sbjct: 527 KEAKELNIHIFETLYHGALEASCELAQEEGAYQTFKGSPASEGILQFDMWNRKPTDLWDW 586
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I +G+RNSL++APMPTASTSQILG NECFEP+TSN+Y RRVLSGEF +VN +L
Sbjct: 587 DTLKSNIIAHGIRNSLVMAPMPTASTSQILGYNECFEPFTSNMYQRRVLSGEFQIVNPYL 646
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W+ +K +I D+GS+Q +P +P+ELK +YKTVWEI QKT++DM+ DR +
Sbjct: 647 LRDLVDLGIWNESMKQHLITDNGSIQNLPNVPQELKDLYKTVWEISQKTIIDMSADRSAF 706
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
ID S S+NIH+ P GKLTS+HF+ W +GLKTGMYYLR++AA+ AI+FT+D V
Sbjct: 707 IDQSHSMNIHIRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDKKV 761
>gi|393213404|gb|EJC98900.1| hypothetical protein FOMMEDRAFT_128598 [Fomitiporia mediterranea
MF3/22]
Length = 868
Score = 1092 bits (2823), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/771 (66%), Positives = 621/771 (80%), Gaps = 20/771 (2%)
Query: 2 YVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAA 61
YV KR ++E V FDKITAR+ KL +GL +H DP+ +++KV GVY+GVTT +LD LAA
Sbjct: 3 YVYKRGERKERVAFDKITARIGKLCFGLDPKHVDPIEITKKVVAGVYQGVTTVELDNLAA 62
Query: 62 ETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVY 121
ETAA +TT HPDYA LAARI +SNLHK TKK FS I D+YN+ N R+G A +I+ + Y
Sbjct: 63 ETAAYLTTKHPDYAILAARIAISNLHKETKKKFSAVISDLYNYVNPRNGRPAGMISKETY 122
Query: 122 DIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKD 181
+ + NA LDS I+Y+RDF Y YFGFKTLERSYLLK+ GK+ ERPQHMLMRVAVGIH
Sbjct: 123 ETVRDNAELLDSAIVYERDFHYQYFGFKTLERSYLLKINGKIAERPQHMLMRVAVGIHGR 182
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAII 241
DI+ I++Y++MSQR+FTHASPTLFNAGTP QLSSCFLV MK+DSI+GIYDTLK+CA+I
Sbjct: 183 DIERTIESYNLMSQRYFTHASPTLFNAGTPHPQLSSCFLVTMKEDSIDGIYDTLKQCAMI 242
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SK+AGGIG+++H IRATGSYI GTNG SNGIVPMLR F+ TARYVDQGG KR GAFA+Y+
Sbjct: 243 SKTAGGIGLNIHCIRATGSYIAGTNGYSNGIVPMLRAFDATARYVDQGGNKRPGAFAIYI 302
Query: 302 EPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLAD 361
EPWHAD+FEFLDLRKNHGKEE RARDLFYALW+PDLFM+RV+S+ W LFCPNEAPGL +
Sbjct: 303 EPWHADVFEFLDLRKNHGKEEVRARDLFYALWIPDLFMKRVESDSDWPLFCPNEAPGLHE 362
Query: 362 CWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG 421
WG EFE L+ KYE EG+AK+ V+AQ LW+ I+++Q+ETG P+ML+KD+ N+KSNQQNLG
Sbjct: 363 VWGDEFEALFEKYENEGRAKRTVKAQKLWYAIIEAQVETGGPFMLYKDSANRKSNQQNLG 422
Query: 422 TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFD 481
TIKSSNLCTE+I+Y+SP ETAVCNLASIALP ++ RGS +D
Sbjct: 423 TIKSSNLCTEIIEYSSPDETAVCNLASIALPSFI-----------------RGST---YD 462
Query: 482 FEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDST 541
F+KL +V +V NLN+IIDVNYYPV+ AR SN+RHRPIGIGVQGLADTF+ L +PFDS
Sbjct: 463 FQKLHDVAKVVAFNLNRIIDVNYYPVQEARNSNMRHRPIGIGVQGLADTFMALRLPFDSP 522
Query: 542 EAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWG 601
EA++LN IFETIY+ AL +SS+IAA +GPY ++ GSP +G LQ D+WGV PSD WDW
Sbjct: 523 EARELNVKIFETIYHAALESSSDIAAVDGPYSSWKGSPAEQGKLQFDLWGVEPSDLWDWK 582
Query: 602 GLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
L++ I++ G+RNSLL++PMPTASTSQILG NECFEPYTSNIY+RRVLSGEF VV LL
Sbjct: 583 SLKEKIAQTGLRNSLLLSPMPTASTSQILGFNECFEPYTSNIYTRRVLSGEFQVVCPWLL 642
Query: 662 HDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYI 721
+L E GLW ++N II +GSVQ IP IP+++KAIYKTVWE+ QK ++DMA DRG +I
Sbjct: 643 RELVERGLWDEQMRNLIIAHNGSVQNIPSIPDDVKAIYKTVWELSQKKIIDMAADRGAFI 702
Query: 722 DHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
SQSLNIH+ P G++TS+HF+ W +GLKTGMYYLR+R AA AI+FTVD
Sbjct: 703 CQSQSLNIHLQSPTNGQMTSMHFYGWKKGLKTGMYYLRTRPAAQAIQFTVD 753
>gi|28422346|gb|AAH46846.1| RRM1 protein, partial [Xenopus laevis]
Length = 760
Score = 1091 bits (2822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 510/772 (66%), Positives = 628/772 (81%), Gaps = 19/772 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG+QE V FDKIT+R++KL YGL++E DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNLEFVDPAQITMKVIQGLYSGVTTIELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT HPDYA LAAR+ VSNLHK TKK FS+ ++D+YN+ N + +P+++ +
Sbjct: 61 AETAATLTTKHPDYAILAARVAVSNLHKETKKIFSDVMEDLYNYVNPLNSKHSPMVSRET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI++ N RL+S IIYDRDF Y++FGFKTLERSYLLK+ GKV ERPQHMLMRV+VGIHK
Sbjct: 121 LDIVLANKDRLNSSIIYDRDFSYNFFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DID+AI+TY+++S++WFTHASPTLFNAGT R QLSSCFL+CMKDDSIEGIYDTLK+CA+
Sbjct: 181 TDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLCMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH D+F+FLDL+KN GKEE RARDLFYA+W+PDLFM+RV++N WSL CP+E PGL
Sbjct: 301 LEPWHYDVFDFLDLKKNTGKEEQRARDLFYAMWIPDLFMKRVENNLDWSLMCPHECPGLE 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG +FE LY KYE+EG+ +KVV+AQ +W I++SQ ETGTPYML+KD CN+KSNQQNL
Sbjct: 361 EVWGDKFEELYEKYEREGRTRKVVKAQQVWHAIIESQTETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YTS E AVCNLAS+AL YV + R F
Sbjct: 421 GTIKCSNLCTEIVEYTSDKEVAVCNLASLALNMYV-------------------TPERSF 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLA+VT ++ NLNKII++N+YPV A SN +HRPIGIGVQGLAD FIL+ PF+S
Sbjct: 462 DFKKLADVTKVIVRNLNKIIEINFYPVPEAEYSNKKHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
+AQ LNK IFETIYY AL +S E+A GPYETY G PVSKGILQ DMW V P+D WDW
Sbjct: 522 EKAQMLNKQIFETIYYAALESSCELAKELGPYETYEGCPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 582 TALKEKIAKYGIRNSLLLAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
+ DLTE GLW+ +KN+II ++GS+Q +P IP +LK +YKTVWEI QKT++ MA DRG +
Sbjct: 642 MKDLTEQGLWNEEMKNQIIANNGSIQNVPDIPADLKELYKTVWEISQKTVITMAADRGAF 701
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR+R AA+ I+FT++
Sbjct: 702 IDQSQSLNIHVAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLN 753
>gi|392397203|ref|YP_006433804.1| ribonucleoside-diphosphate reductase subunit alpha [Flexibacter
litoralis DSM 6794]
gi|390528281|gb|AFM04011.1| ribonucleoside-diphosphate reductase, alpha subunit [Flexibacter
litoralis DSM 6794]
Length = 842
Score = 1091 bits (2822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/811 (64%), Positives = 640/811 (78%), Gaps = 20/811 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG++E V KITAR+++L L + P ++ KV G+Y VTT +LDELA
Sbjct: 1 MYVIKRDGRKEEVIMQKITARIERLCDNLDTRYIKPKEITYKVLAGLYDNVTTIELDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA M T HPDYA LA+RI +SNLHK TK +FSETI+++YN+ N ++ A LI+D+V
Sbjct: 61 AETAATMATVHPDYAILASRIAISNLHKETKDAFSETIEELYNYINPKTNESAGLISDEV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
++ K A L+ + Y RD++YDYFGFKTLERSYLL++ GKV ERPQ M+MRV+VGIH
Sbjct: 121 VQVVRKYAHVLNQAVDYSRDYEYDYFGFKTLERSYLLRLDGKVTERPQQMIMRVSVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DID+AIKTYH++S+RWFTHA+PTLFNAGTP+ Q+SSCFL+ ++ DS++GIYDTLK+CA
Sbjct: 181 ADIDAAIKTYHLISERWFTHATPTLFNAGTPKPQMSSCFLLEVQGDSVDGIYDTLKQCAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIGVSVHN+RATGSYIRGTNG SNGIVPML+VFNDTARY+DQGG KRKGAFAVY
Sbjct: 241 ISQSAGGIGVSVHNVRATGSYIRGTNGYSNGIVPMLKVFNDTARYIDQGGNKRKGAFAVY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+FEFLDL+KNHGKEE RARDLFYALW+ D+FM+RVQ +G WSLFCPNEA GLA
Sbjct: 301 LEPWHADVFEFLDLKKNHGKEEARARDLFYALWISDIFMKRVQEDGEWSLFCPNEARGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+GTE E LYT+YE+EGKA+K ++AQ LWF IL++QIETGTPYML+KD N KSNQ+NL
Sbjct: 361 DCYGTEHEELYTRYEREGKARKTIRAQELWFAILEAQIETGTPYMLYKDHANNKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+++YT+P E AVCNLAS+ALP++V + G +E F
Sbjct: 421 GTIKSSNLCTEIMEYTAPDEVAVCNLASLALPKFVMDNGNGLE----------------F 464
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+ EKL EV T NLN+IID NYYPVE AR SN+RHRPIG+GVQGLAD FILL MPF+S
Sbjct: 465 NHEKLYEVAYTATVNLNRIIDRNYYPVEEARNSNMRHRPIGLGVQGLADAFILLRMPFES 524
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP---SDR 597
EA LNK+IFET+Y+ A+ S ++A EG YET+ GSP+SKG Q DMW V+ S R
Sbjct: 525 EEAAALNKEIFETMYFAAMTASKDLAITEGAYETFEGSPLSKGQFQFDMWNVDEDYHSGR 584
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
W+W LR + K+G RNSLL+APMPTASTSQILGNNECFEPYTSNIY RRVLSGEFVVVN
Sbjct: 585 WNWEELRGEVVKHGARNSLLLAPMPTASTSQILGNNECFEPYTSNIYVRRVLSGEFVVVN 644
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
KHLL DL + +W +KN++I +GSVQ I +IP+ELK IYKTVWEI Q+T++DM+ DR
Sbjct: 645 KHLLKDLIAIDMWDDQMKNELISANGSVQNIKRIPQELKDIYKTVWEISQRTIIDMSADR 704
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
G YI SQSLN+H+ P FGKLTS+HFHAW RGLKTGMYYLR++AAADAIKFTVD L+
Sbjct: 705 GVYICQSQSLNVHIQNPTFGKLTSMHFHAWKRGLKTGMYYLRTKAAADAIKFTVDKDALE 764
Query: 778 ENPKVTDDDDAKMAQMVCSLTNREECMACGS 808
+ AK A+ + + +N E G+
Sbjct: 765 IGKDTAINHKAK-AEEIVAQSNEEMLEMAGA 794
>gi|406604875|emb|CCH43750.1| ribonucleoside-diphosphate reductase subunit M1 [Wickerhamomyces
ciferrii]
Length = 877
Score = 1091 bits (2822), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/775 (63%), Positives = 629/775 (81%), Gaps = 14/775 (1%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG++E V FDKITAR+ +L YGL H D V ++Q++ +GVY+GVTT +LD LA
Sbjct: 1 MYVFKRDGRREPVKFDKITARISRLCYGLDPAHIDAVKITQRIISGVYEGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AET A MTT HPDYA+LAARI +SNLHK T K FS + ++YN+ N R+G +P+++ D
Sbjct: 61 AETCAYMTTIHPDYATLAARIAISNLHKQTTKQFSAVVDELYNYINPRTGKHSPMLSKDT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YDI+ + +S I+Y+RDF+Y+YFGFKTLERSYLL+V GKV ERPQH++MRVA+GIH
Sbjct: 121 YDIVQEFKDEFNSAIVYNRDFNYNYFGFKTLERSYLLRVDGKVAERPQHLIMRVAIGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI+S ++TY++MS+R+FTHASPTLFNAGTP Q+SSCFLV M+DDSI+GIY+TLK+CA+
Sbjct: 181 RDIESVVETYNLMSERYFTHASPTLFNAGTPHPQMSSCFLVAMQDDSIDGIYETLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIR+TGSYI GTNGTSNGI+PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+F+D+RKNHGKEE RARDLF ALW+ DLFM+RV+SNG W+LF PNEAPGL
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWISDLFMKRVESNGEWTLFSPNEAPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ +G EFE LY +YEKEG+ +K V+AQ LW+ IL++Q ETGTPYML+KD CNKK+NQ+NL
Sbjct: 361 ETYGDEFEELYERYEKEGRGRKTVKAQKLWYAILEAQTETGTPYMLYKDACNKKTNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G IKSSNLCTE+++Y+SP E AVCNLASIALP ++ S K +++
Sbjct: 421 GIIKSSNLCTEIVEYSSPDEVAVCNLASIALPAFIEV--------------SADRKTQFY 466
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+FE+L ++ +VT+NLN+IID N+YPVE ARRSN+R+RPI +GVQGLAD F+ L +PF+S
Sbjct: 467 NFEQLHKIAKVVTKNLNRIIDRNFYPVEEARRSNMRNRPIALGVQGLADAFMALRLPFES 526
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
+A++LN IFETIY+ A+ S E+A +EG YET+ GSP S+G+LQ D+W P+ W+W
Sbjct: 527 QKAKELNIQIFETIYHAAVEASVELAKKEGAYETFQGSPASQGLLQFDLWDQKPTGLWNW 586
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ + K GVRNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF +VN +L
Sbjct: 587 DDLKADVVKYGVRNSLLVAPMPTASTSQILGYNECFEPYTSNIYSRRVLAGEFQIVNPYL 646
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W +K+ II D+GS+Q +P IP+ELK +YKTVWEI QKT++DMA DR Y
Sbjct: 647 LRDLVDLGVWDDAMKSHIIADNGSIQNLPNIPKELKDLYKTVWEISQKTVIDMAADRSAY 706
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
ID SQSLNIH+ P GKLTS+HF+ W +GLKTGMYYLR++AA+ AI+FTVD+SV
Sbjct: 707 IDQSQSLNIHIRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTVDSSV 761
>gi|298207003|ref|YP_003715182.1| ribonucleoside-diphosphate reductase large chain [Croceibacter
atlanticus HTCC2559]
gi|83849637|gb|EAP87505.1| probable ribonucleoside-diphosphate reductase large chain
[Croceibacter atlanticus HTCC2559]
Length = 840
Score = 1090 bits (2818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/797 (63%), Positives = 635/797 (79%), Gaps = 24/797 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V+KRDG++E V FDKITAR+KKL YGL+ E DPV V+ +V G+Y GVTTS LD LA
Sbjct: 1 MDVLKRDGRREPVMFDKITARVKKLCYGLN-ELVDPVKVAMRVIEGLYDGVTTSDLDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA+MT +HPDYA LAARI VSNLHK+TKK+FSE + D+Y + N R+G KAPL++D+V
Sbjct: 60 AETAASMTVSHPDYAKLAARISVSNLHKDTKKTFSEVMTDLYEYVNPRTGKKAPLLSDEV 119
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y +I N RLDS IIY+RD+ YDYFGFKTLERSYLLK+ GK+ ERPQHMLMRV+VGIH
Sbjct: 120 YKVIQDNKDRLDSTIIYNRDYGYDYFGFKTLERSYLLKLNGKIAERPQHMLMRVSVGIHL 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD+D+AI+TY +MS+++FTHA+PTLFN+GTP+ Q+SSCFL+ M+DDSI+GIYDTLK+ A
Sbjct: 180 DDLDAAIETYELMSKKYFTHATPTLFNSGTPKPQMSSCFLLTMQDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYI GTNGTSNGIVPML+V+NDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYISGTNGTSNGIVPMLQVYNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWHADIF+FLDL+KNHGKEE RARDLFYA+W+PDLFM+RV+ +G W+L CPNE P L
Sbjct: 300 IEPWHADIFDFLDLKKNHGKEEMRARDLFYAMWIPDLFMKRVEEDGNWTLMCPNECPNLF 359
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ EF+ LY KYE E K +K ++A+ LW +IL+SQIETGTPYML+KD N+KSNQ+NL
Sbjct: 360 NVHSEEFDELYLKYESENKGRKTIKARVLWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++YTSP E AVCNLASIALP +V KN F
Sbjct: 420 GTIRSSNLCTEIMEYTSPDEVAVCNLASIALPMFV--------------------KNGAF 459
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D ++L +T VT+NLNK+ID NYYPV+ A SN RHRP+G+G+QGLAD FI+L MPF S
Sbjct: 460 DHKELFRITKRVTKNLNKVIDRNYYPVKEAENSNFRHRPVGLGIQGLADAFIMLRMPFTS 519
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP---SDR 597
EA+ LN++IFET+Y+ A+ S E+A EGPY +Y GSP+SKG Q ++WG+ S R
Sbjct: 520 DEAKTLNQEIFETLYFAAVTASMELAIEEGPYSSYEGSPISKGEFQYNLWGIKDEELSGR 579
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW GLR + +NGVRNSLLVAPMPTASTSQILGNNE FEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWAGLRQKVLENGVRNSLLVAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
KHLL DL +GLW+ +KN I+ +GS+Q I IP++LK +YKTV+E+ K ++DM+ R
Sbjct: 640 KHLLEDLVNLGLWNNDLKNAIMRANGSIQNIDGIPQDLKELYKTVYELSMKDIIDMSRHR 699
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
G +ID SQSLN+ M+ N+ KLTS+HF+AW GLKTGMYYLR++AA DAIKFTV+ +
Sbjct: 700 GYFIDQSQSLNLFMENANYAKLTSMHFYAWKNGLKTGMYYLRTKAAVDAIKFTVEKAKKA 759
Query: 778 ENPKVTDDDDAKMAQMV 794
E + AK A+ +
Sbjct: 760 EPQPQQQEVAAKAAETL 776
>gi|401626001|gb|EJS43969.1| rnr1p [Saccharomyces arboricola H-6]
Length = 887
Score = 1090 bits (2818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/775 (63%), Positives = 624/775 (80%), Gaps = 15/775 (1%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG++E V FDKITAR+ +L YGL +H D V V+Q++ +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEPVQFDKITARISRLCYGLDPKHVDAVKVTQRIISGVYEGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AET A MTT HPDYA+LAARI +SNLHK T K FS+ I D+Y + N +G AP+I+DDV
Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVIDDLYRYVNAATGKPAPMISDDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+I+M+N +L+S I+YDRDF Y YFGFKTLERSYLL++ G+V ERPQH++MRVA+GIH
Sbjct: 121 YNIVMENKDKLNSAIVYDRDFQYSYFGFKTLERSYLLRINGQVAERPQHLIMRVALGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI++A++TY++MS ++FTHASPTLFNAGTP+ Q+SSCFLV MK+DSIEGIYDTLKECA+
Sbjct: 181 RDIEAALETYNLMSLKYFTHASPTLFNAGTPKPQMSSCFLVAMKEDSIEGIYDTLKECAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+F+D+RKNHGKEE RARDLF ALWVPDLFM+RV+ NG W+LF P APGL+
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWVPDLFMKRVEENGTWTLFSPTSAPGLS 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EFE LYT+YEKEG+ K ++AQ LW+ IL++Q ETGTP++++KD CN+KSNQ+NL
Sbjct: 361 DCYGDEFEALYTRYEKEGRG-KTIKAQKLWYSILEAQTETGTPFVVYKDACNRKSNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G IKSSNLC E+++Y++P ETAVCNLAS+ALP ++ S K +
Sbjct: 420 GVIKSSNLCCEIVEYSAPDETAVCNLASVALPAFIET--------------SEDGKTSTY 465
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+F+KL E+ +VT NLNK+ID NYYPVE AR+SN+RHRPI +GVQGLADTF+LL +PFDS
Sbjct: 466 NFKKLHEIAKVVTRNLNKVIDRNYYPVEEARKSNMRHRPIALGVQGLADTFMLLRLPFDS 525
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+ LN IFETIY+ + S E+A ++GPYET+ GSP S+GILQ DMW P WDW
Sbjct: 526 EEARLLNVQIFETIYHASTEASCELAQKDGPYETFQGSPASQGILQFDMWDQKPYGMWDW 585
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR + K+G+RNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +L
Sbjct: 586 DTLRSDVMKHGIRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W +K +I +GS+Q +P +P+ELK +YKTVWEI QKT+++MA DR Y
Sbjct: 646 LRDLVDLGIWDDGMKQYLITQNGSIQGLPNVPQELKDLYKTVWEISQKTIINMAADRSIY 705
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
ID S SLN+ + P GKLTS+HF+ W +GLKTGMYYLR++AA+ AI+FT+D V
Sbjct: 706 IDQSHSLNLFLRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQKV 760
>gi|367005242|ref|XP_003687353.1| hypothetical protein TPHA_0J00970 [Tetrapisispora phaffii CBS 4417]
gi|357525657|emb|CCE64919.1| hypothetical protein TPHA_0J00970 [Tetrapisispora phaffii CBS 4417]
Length = 875
Score = 1090 bits (2818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/778 (62%), Positives = 629/778 (80%), Gaps = 14/778 (1%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG++E V FDKITAR+ +L YGL +H DPV V+Q++ +GVY+GVTT +LD LA
Sbjct: 1 MFVIKRDGRKEPVRFDKITARISRLCYGLDSDHVDPVKVTQRIISGVYEGVTTEELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA LAAR+ +SNLHK T K FS+ I+ +Y + N + A LI+DDV
Sbjct: 61 AETAAYMTTVHPDYAILAARLAISNLHKQTTKCFSDVIQQLYEYINPENNKPAKLISDDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+++MK+ L+S I++DRDF ++YFGFKTLERSYLLK+ KV ERPQHM+MRVA+GIH
Sbjct: 121 YEVVMKHKDELNSAIVFDRDFQFNYFGFKTLERSYLLKMNNKVAERPQHMIMRVALGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDI+S ++TY++MSQR+FTHASPTLFNAGTP Q+SSCFLV MKDDS++GI+DTLKECA+
Sbjct: 181 DDIESVLETYNLMSQRYFTHASPTLFNAGTPNPQMSSCFLVAMKDDSLDGIFDTLKECAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ HNIRATGSYI GTNGTSNG++PMLRVFN+TARYVDQGG KR GA A+Y
Sbjct: 241 ISKTAGGIGLHAHNIRATGSYIAGTNGTSNGLIPMLRVFNNTARYVDQGGNKRPGAIAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIF+F+D+RKNHGKEE RARDLF ALWVPDLFM+RV+ NG W+LF P+EAPGL+
Sbjct: 301 LEPWHDDIFDFVDIRKNHGKEEMRARDLFPALWVPDLFMKRVEENGDWTLFSPSEAPGLS 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LY KY EG+ ++ ++AQ LW+ IL++Q ETGTP++++KD CN+KSNQ+NL
Sbjct: 361 DVYGAEFEALYNKYVAEGRGRRTIKAQKLWYSILEAQTETGTPFIVYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLC E+++Y++P ETAVCNLASIALP ++ V G+ Y
Sbjct: 421 GTIKSSNLCCEIVEYSAPDETAVCNLASIALPAFID-------------VSEDGNTQTY- 466
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+F+KL +V ++T NLN++ID NYYPVE A+ SN RHRPI +G+QGLADTF LL +PF+S
Sbjct: 467 NFQKLHDVAKVLTRNLNRVIDRNYYPVEEAKNSNFRHRPIALGIQGLADTFQLLRLPFES 526
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
+A++LN IFET+Y+ AL +S E+A ++GPY +Y GSPVSKG+LQ DMWGV+P+D WDW
Sbjct: 527 QKAKELNIHIFETLYHAALESSCELAQKDGPYPSYQGSPVSKGVLQYDMWGVDPTDLWDW 586
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I K+G+RNSLL+APMPTASTSQILG NECFEP+TSN+Y RR LSGEF +VN +L
Sbjct: 587 APLKANIKKHGIRNSLLLAPMPTASTSQILGYNECFEPFTSNMYQRRTLSGEFQIVNPYL 646
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++GLW+ +K +I +GS+ +P +P+ELK IYKTVWEI QKT+++ A DR +
Sbjct: 647 LRDLVDLGLWNDSMKQHLITANGSIADLPNVPQELKEIYKTVWEISQKTIIEFAADRSAF 706
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE 778
ID S SLNIH+ P FGKLTS+HF+ W +GLKTGMYYLR++AA+ AI+FT+D V ++
Sbjct: 707 IDQSHSLNIHIRAPTFGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDAKVAEQ 764
>gi|344303185|gb|EGW33459.1| hypothetical protein SPAPADRAFT_60812 [Spathaspora passalidarum
NRRL Y-27907]
Length = 845
Score = 1089 bits (2817), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/775 (64%), Positives = 628/775 (81%), Gaps = 16/775 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG++E V FDKITAR+++L YGL +H D V ++Q+V +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEPVRFDKITARVQRLCYGLDPQHVDAVAITQRVISGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA LAARI VSNLHK T K +S+ K++Y + N ++GL +P+I+ +
Sbjct: 61 AETAAYMTTIHPDYAILAARIAVSNLHKQTIKQYSQVSKELYEYINPKTGLHSPMISKET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YDII+KNA L+S I+YDRDF Y+YFGFKTLERSYLL++ GKV ERPQH+LMRVA+GIH
Sbjct: 121 YDIIVKNADELNSAIVYDRDFSYNYFGFKTLERSYLLRINGKVAERPQHLLMRVAIGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDI I++Y+MMSQ++FTH SPTLFNAGTP Q+SSCFLV MK+DSI+GIYDTLK CA+
Sbjct: 181 DDIPRVIESYNMMSQKYFTHGSPTLFNAGTPSPQMSSCFLVAMKEDSIDGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+ +HNIRATGSYI GTNGTSNGI+PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLHIHNIRATGSYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+F+D+RKN GKEE RARDLF ALW+PDLFM+RV+ NG W+LF PNEAPGL
Sbjct: 301 LEPWHADIFDFIDIRKNSGKEEIRARDLFPALWIPDLFMKRVEQNGEWTLFSPNEAPGLP 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LY +YE+EG+ K V+AQ LW+ IL++Q ETGTP+ML+KD CNKKSNQ+NL
Sbjct: 361 DVYGDEFEELYERYEREGRGVKTVKAQKLWYSILEAQTETGTPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G IKSSNLC E+++Y++P E AVCNLASIALP +V + + ++
Sbjct: 421 GIIKSSNLCCEIVEYSAPDEVAVCNLASIALPSFVE----------------KDENHSWY 464
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+FEKL EVT +VT NLN++ID NYYPV AR SN+R+RP+ +GVQGLAD F+ L +PFDS
Sbjct: 465 NFEKLHEVTKVVTRNLNRVIDRNYYPVPEARNSNMRNRPVALGVQGLADAFMALRLPFDS 524
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LN IFETIY+ A+ +S E+A EGPY TY GSP SKG+LQ D+W P++ WDW
Sbjct: 525 QEARELNIQIFETIYHAAVESSVELAQEEGPYPTYEGSPASKGLLQFDLWERKPTELWDW 584
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+K+G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL+GEF +VN L
Sbjct: 585 DTLKQKIAKHGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQIVNPFL 644
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W+ +K+ II ++GS+Q +P +P+ELK +YKTVWEI QK ++DMA DR Y
Sbjct: 645 LRDLVDLGIWNEAMKSNIIANNGSIQSLPNVPDELKELYKTVWEISQKHIIDMAADRAAY 704
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
ID SQSLNIH+ +P GKLTS+HF+ W +GLKTGMYYLR++AA+ AI+FT+D V
Sbjct: 705 IDQSQSLNIHIKEPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDKKV 759
>gi|392591881|gb|EIW81208.1| ribonucleotide reductase alpha subunit [Coniophora puteana
RWD-64-598 SS2]
Length = 884
Score = 1089 bits (2817), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/775 (64%), Positives = 620/775 (80%), Gaps = 20/775 (2%)
Query: 2 YVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAA 61
+V KR ++E V FDKITAR+ KL YGL + D + V++KV GVY+GVTT +LD LAA
Sbjct: 3 FVFKRGTRRETVQFDKITARIAKLCYGLDARYVDTIEVAKKVIAGVYQGVTTVELDNLAA 62
Query: 62 ETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVY 121
ETAA +TT HPDYA LAARI +SNLHK TKKSFS+ KD+Y + N ++G A +++ + Y
Sbjct: 63 ETAAYLTTKHPDYAILAARIAISNLHKETKKSFSQVTKDLYEYVNPKNGKLASMVSKETY 122
Query: 122 DIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKD 181
DI+ NA LDS IIY+RDF Y+YFGFKTLERSYLL++ G+V ERPQHM+MRVA+GIH D
Sbjct: 123 DIVQANAELLDSAIIYNRDFSYNYFGFKTLERSYLLRINGRVAERPQHMIMRVAIGIHGD 182
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAII 241
DI+ ++TY++MS+R+FTHASPTLFNAGTP Q++SCFLVCMKDDSIEGIYDTL++CA+I
Sbjct: 183 DIEHVLETYNLMSERFFTHASPTLFNAGTPHPQMASCFLVCMKDDSIEGIYDTLRQCAMI 242
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SK+AGGIG+++H IRAT SYI GTNG SNGIVPMLRVF+ TARYVDQGG KR GAFA+Y+
Sbjct: 243 SKTAGGIGMNIHCIRATNSYIAGTNGYSNGIVPMLRVFDSTARYVDQGGNKRPGAFAIYI 302
Query: 302 EPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLAD 361
EPWH DI +F DLRKNHGKEE RARDLFYALW+ DLFM+RV+++ WSLFCPNEAPGLAD
Sbjct: 303 EPWHPDILDFCDLRKNHGKEESRARDLFYALWINDLFMKRVEADEDWSLFCPNEAPGLAD 362
Query: 362 CWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG 421
WG EFE LY KYEKEG+A++ + AQ LW+ IL+SQIETG P+ML+KD+ N+KSNQQNLG
Sbjct: 363 VWGDEFETLYLKYEKEGRARRTMPAQKLWYSILESQIETGGPFMLYKDSANRKSNQQNLG 422
Query: 422 TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFD 481
TIKSSNLCTE+I+Y+SP ETAVCNLAS+ALP ++R+ +D
Sbjct: 423 TIKSSNLCTEIIEYSSPEETAVCNLASLALPTFIRDGK--------------------YD 462
Query: 482 FEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDST 541
F+ L +V+ ++T NLN+IID NYYPV A RSN+RHRPIG+GVQGLAD F++L MPFDS
Sbjct: 463 FKTLHDVSKVLTYNLNRIIDRNYYPVPEAERSNMRHRPIGLGVQGLADAFMILRMPFDSP 522
Query: 542 EAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWG 601
EA++LN IFETIY+ AL SSE+A + GPYETY GSP +G LQ D+WGV P+D WDW
Sbjct: 523 EARRLNLQIFETIYHAALEASSELAEKLGPYETYKGSPAEQGQLQYDLWGVTPTDLWDWT 582
Query: 602 GLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
L+ I+++G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVL+GEF VV LL
Sbjct: 583 ELKAKIARHGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLAGEFQVVCPWLL 642
Query: 662 HDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYI 721
DL E LW+ +KN II +GSV IP IPE++K IYKTVWEI QK ++D+A DRG +I
Sbjct: 643 RDLVERDLWNDDMKNMIIAHNGSVANIPSIPEDIKQIYKTVWEISQKVVIDLAADRGAFI 702
Query: 722 DHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
SQSLN+H+ P +LTS+HF+ W +GLKTGMYYLR+R A+ AI+FT++ SV+
Sbjct: 703 CQSQSLNVHLQAPTLRQLTSMHFYGWKKGLKTGMYYLRTRPASQAIQFTIEQSVI 757
>gi|308501413|ref|XP_003112891.1| CRE-RNR-1 protein [Caenorhabditis remanei]
gi|308265192|gb|EFP09145.1| CRE-RNR-1 protein [Caenorhabditis remanei]
Length = 786
Score = 1089 bits (2816), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/806 (63%), Positives = 635/806 (78%), Gaps = 30/806 (3%)
Query: 2 YVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAA 61
YVVKRDG+ E VHFDKIT+R++KLSYGL++E DPV V+ KV +G+YKGVTT +LD LAA
Sbjct: 8 YVVKRDGRMEDVHFDKITSRIQKLSYGLNMEFVDPVAVAIKVISGLYKGVTTVELDNLAA 67
Query: 62 ETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVY 121
ETAA+MTT HP+YA LAARI VSNLHK T K FSE +K ++ ++ +G AP+I+D+ +
Sbjct: 68 ETAASMTTQHPEYALLAARIAVSNLHKKTNKVFSEVMKTLHEFHHPHTGKHAPMISDETW 127
Query: 122 DIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKD 181
II KNA +L+S I+YDRD+ Y YFGFKTLERSYLLK+ ++VERPQ MLMRV++GIH +
Sbjct: 128 AIIEKNADKLNSAIVYDRDYSYTYFGFKTLERSYLLKINKEIVERPQQMLMRVSIGIHGE 187
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAII 241
DI +AI+TY++MS+R+ THASPTLFN+GT R Q+SSCFL+ M +DSI GIYDTLK+CA+I
Sbjct: 188 DIAAAIETYNLMSERYMTHASPTLFNSGTCRPQMSSCFLLTMSEDSILGIYDTLKQCALI 247
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SKSAGGIG++VH IRATGS I GTNGTSNG++PMLRV+N+TARYVDQGG KR GAFA+YL
Sbjct: 248 SKSAGGIGLNVHKIRATGSVIAGTNGTSNGLIPMLRVYNNTARYVDQGGNKRPGAFAIYL 307
Query: 302 EPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLAD 361
EPWHAD+FEF+ LRKN G EE RARDLF ALW+PDLFM+RV+ + WSL CP E PGL D
Sbjct: 308 EPWHADVFEFVSLRKNTGPEEERARDLFLALWIPDLFMKRVEKDQNWSLMCPCECPGLDD 367
Query: 362 CWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG 421
CWG EFE LY KYE EG+ +K V+A+ LW I+ +QIETG PY+ +KD N+KSNQQNLG
Sbjct: 368 CWGEEFEALYAKYEAEGRVRKTVKARKLWEHIVSNQIETGLPYITYKDAANRKSNQQNLG 427
Query: 422 TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFD 481
TIK SNLCTE+++Y++P E AVCNLASIAL RYV + + FD
Sbjct: 428 TIKCSNLCTEIMEYSAPDEIAVCNLASIALNRYV-------------------TPEKKFD 468
Query: 482 FEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDST 541
F+KLAEVT ++T+NLNKIIDVNYYPVE AR SN+RHRPIG+GVQGLAD F+L+ PF S
Sbjct: 469 FKKLAEVTKVITKNLNKIIDVNYYPVEEARNSNMRHRPIGLGVQGLADCFMLMRYPFTSK 528
Query: 542 EAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWG 601
+A+ LNK IFETIYY AL S E+A R+GPY TY GSPVSKG LQ DMWGV P+D+ DW
Sbjct: 529 QARDLNKRIFETIYYAALEASCELAERDGPYSTYEGSPVSKGQLQFDMWGVTPTDQCDWA 588
Query: 602 GLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
LR I+ +G+RNSLL+APMPTAST+QILGNNE EPYTSNIYSRRVLSG+F +VN H+L
Sbjct: 589 ALRKKIATHGIRNSLLMAPMPTASTAQILGNNESIEPYTSNIYSRRVLSGDFQIVNPHML 648
Query: 662 HDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYI 721
DL E GLW+ +KN++I ++GS+Q IP+IP ++K +Y TVWEI QK +++MA DRG +I
Sbjct: 649 KDLVERGLWTDEMKNRLIANNGSIQNIPEIPADIKELYLTVWEISQKEIIEMAADRGAFI 708
Query: 722 DHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPK 781
D SQSLNIHM +P++ +TS+HF+ W +GLKTGMYYLR++ A +A++FTVD LK
Sbjct: 709 DQSQSLNIHMAKPSYAAITSMHFYGWKQGLKTGMYYLRTKPAVNAVQFTVDKGALK---- 764
Query: 782 VTDDDDAKMAQMVCSLTNREE-CMAC 806
AK+ V +L ++E C+ C
Sbjct: 765 ------AKVDPKVAALQQQDEGCLMC 784
>gi|6320914|ref|NP_010993.1| ribonucleotide-diphosphate reductase subunit RNR1 [Saccharomyces
cerevisiae S288c]
gi|730514|sp|P21524.2|RIR1_YEAST RecName: Full=Ribonucleoside-diphosphate reductase large chain 1;
AltName: Full=Ribonucleotide reductase R1 subunit 1;
AltName: Full=Ribonucleotide reductase large subunit 1
gi|93278634|pdb|1ZYZ|A Chain A, Structures Of Yeast Ribonucloetide Reductase I
gi|93278635|pdb|1ZYZ|B Chain B, Structures Of Yeast Ribonucloetide Reductase I
gi|93278636|pdb|1ZZD|A Chain A, Structures Of Yeast Ribonucleotide Reductase I
gi|93279171|pdb|2CVS|A Chain A, Structures Of Yeast Ribonucleotide Reductase I
gi|93279172|pdb|2CVT|A Chain A, Structures Of Yeast Ribonucleotide Reductase I
gi|93279173|pdb|2CVU|A Chain A, Structures Of Yeast Ribonucleotide Reductase I
gi|93279174|pdb|2CVV|A Chain A, Structures Of Yeast Ribonucleotide Reductase I
gi|93279175|pdb|2CVW|A Chain A, Structures Of Yeast Ribonucleotide Reductase I
gi|93279176|pdb|2CVX|A Chain A, Structures Of Yeast Ribonucleotide Reductase I
gi|93279177|pdb|2CVY|A Chain A, Structures Of Yeast Ribonucleotide Reductase I
gi|93279277|pdb|2EUD|A Chain A, Structures Of Yeast Ribonucleotide Reductase I Complexed
With Ligands And Subunit Peptides
gi|197107210|pdb|2ZLF|A Chain A, The Structural Basis For Peptidomimetic Inhibition Of
Eukaryotic Ribonucleotide Reductase
gi|197107212|pdb|2ZLG|A Chain A, The Structual Basis For Peptidomimetic Inhibition Of
Eukaryotic Ribonucleotide Reductase
gi|290560304|pdb|3K8T|A Chain A, Structure Of Eukaryotic Rnr Large Subunit R1 Complexed
With Designed Adp Analog Compound
gi|323714514|pdb|3PAW|A Chain A, Low Resolution X-Ray Crystal Structure Of Yeast Rnr1p With
Datp Bound In The A-Site
gi|323714515|pdb|3PAW|B Chain B, Low Resolution X-Ray Crystal Structure Of Yeast Rnr1p With
Datp Bound In The A-Site
gi|323714516|pdb|3PAW|C Chain C, Low Resolution X-Ray Crystal Structure Of Yeast Rnr1p With
Datp Bound In The A-Site
gi|323714517|pdb|3PAW|D Chain D, Low Resolution X-Ray Crystal Structure Of Yeast Rnr1p With
Datp Bound In The A-Site
gi|383875418|pdb|3S87|A Chain A, Structure Of Yeast Ribonucleotide Reductase 1 With Dgtp
And Adp
gi|383875420|pdb|3S8B|A Chain A, Structure Of Yeast Ribonucleotide Reductase 1 With Amppnp
And Cdp
gi|414145322|pdb|3RSR|A Chain A, Crystal Structure Of 5-Nitp Inhibition Of Yeast
Ribonucleotide Reductase
gi|603306|gb|AAB64606.1| Rnr1p: Ribonucleotide reductase [Saccharomyces cerevisiae]
gi|256271462|gb|EEU06516.1| Rnr1p [Saccharomyces cerevisiae JAY291]
gi|285811701|tpg|DAA07729.1| TPA: ribonucleotide-diphosphate reductase subunit RNR1
[Saccharomyces cerevisiae S288c]
Length = 888
Score = 1089 bits (2816), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/775 (63%), Positives = 626/775 (80%), Gaps = 15/775 (1%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG++E V FDKITAR+ +L YGL +H D V V+Q++ +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEPVQFDKITARISRLCYGLDPKHIDAVKVTQRIISGVYEGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AET A MTT HPDYA+LAARI +SNLHK T K FS+ ++D+Y + N +G AP+I+DDV
Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVVEDLYRYVNAATGKPAPMISDDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+I+M+N +L+S I+YDRDF Y YFGFKTLERSYLL++ G+V ERPQH++MRVA+GIH
Sbjct: 121 YNIVMENKDKLNSAIVYDRDFQYSYFGFKTLERSYLLRINGQVAERPQHLIMRVALGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI++A++TY++MS ++FTHASPTLFNAGTP+ Q+SSCFLV MK+DSIEGIYDTLKECA+
Sbjct: 181 RDIEAALETYNLMSLKYFTHASPTLFNAGTPKPQMSSCFLVAMKEDSIEGIYDTLKECAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+F+D+RKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF P APGL+
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEENGTWTLFSPTSAPGLS 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EFE LYT+YEKEG+ K ++AQ LW+ IL++Q ETGTP++++KD CN+KSNQ+NL
Sbjct: 361 DCYGDEFEALYTRYEKEGRG-KTIKAQKLWYSILEAQTETGTPFVVYKDACNRKSNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G IKSSNLC E+++Y++P ETAVCNLAS+ALP ++ S K +
Sbjct: 420 GVIKSSNLCCEIVEYSAPDETAVCNLASVALPAFIET--------------SEDGKTSTY 465
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+F+KL E+ +VT NLN++ID NYYPVE AR+SN+RHRPI +GVQGLADTF+LL +PFDS
Sbjct: 466 NFKKLHEIAKVVTRNLNRVIDRNYYPVEEARKSNMRHRPIALGVQGLADTFMLLRLPFDS 525
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+ LN IFETIY+ ++ S E+A ++GPYET+ GSP S+GILQ DMW P WDW
Sbjct: 526 EEARLLNIQIFETIYHASMEASCELAQKDGPYETFQGSPASQGILQFDMWDQKPYGMWDW 585
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I K+GVRNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +L
Sbjct: 586 DTLRKDIMKHGVRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W +K +I +GS+Q +P +P+ELK +YKTVWEI QKT+++MA DR Y
Sbjct: 646 LRDLVDLGIWDEGMKQYLITQNGSIQGLPNVPQELKDLYKTVWEISQKTIINMAADRSVY 705
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
ID S SLN+ + P GKLTS+HF+ W +GLKTGMYYLR++AA+ AI+FT+D +
Sbjct: 706 IDQSHSLNLFLRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQKI 760
>gi|349577734|dbj|GAA22902.1| K7_Rnr1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 888
Score = 1088 bits (2815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/775 (63%), Positives = 626/775 (80%), Gaps = 15/775 (1%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG++E V FDKITAR+ +L YGL +H D V V+Q++ +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEPVQFDKITARISRLCYGLDPKHIDAVKVTQRIISGVYEGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AET A MTT HPDYA+LAARI +SNLHK T K FS+ ++D+Y + N +G AP+I+DDV
Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVVEDLYRYVNAATGKPAPMISDDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+I+M+N +L+S I+YDRDF Y YFGFKTLERSYLL++ G+V ERPQH++MRVA+GIH
Sbjct: 121 YNIVMENKDKLNSAIVYDRDFQYSYFGFKTLERSYLLRINGQVAERPQHLIMRVALGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI++A++TY++MS ++FTHASPTLFNAGTP+ Q+SSCFLV MK+DSIEGIYDTLKECA+
Sbjct: 181 RDIEAALETYNLMSLKYFTHASPTLFNAGTPKPQMSSCFLVAMKEDSIEGIYDTLKECAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+F+D+RKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF P APGL+
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEENGTWTLFSPTSAPGLS 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EFE LYT+YEKEG+ K ++AQ LW+ IL++Q ETGTP++++KD CN+KSNQ+NL
Sbjct: 361 DCYGDEFEALYTRYEKEGRG-KTIKAQKLWYSILEAQTETGTPFVVYKDACNRKSNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G IKSSNLC E+++Y++P ETAVCNLAS+ALP ++ S K +
Sbjct: 420 GVIKSSNLCCEIVEYSAPDETAVCNLASVALPAFIET--------------SEDGKTSTY 465
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+F+KL E+ +VT NLN++ID NYYPVE AR+SN+RHRPI +GVQGLADTF+LL +PFDS
Sbjct: 466 NFKKLHEIAKVVTRNLNRVIDRNYYPVEEARKSNMRHRPIALGVQGLADTFMLLRLPFDS 525
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+ LN IFETIY+ ++ S E+A ++GPYET+ GSP S+GILQ DMW P WDW
Sbjct: 526 EEARLLNIQIFETIYHASMEASCELAQKDGPYETFQGSPASQGILQFDMWDQKPYGMWDW 585
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I K+G+RNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +L
Sbjct: 586 DTLRKDIMKHGIRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W +K +I +GS+Q +P +P+ELK +YKTVWEI QKT+++MA DR Y
Sbjct: 646 LRDLVDLGIWDEGMKQYLITQNGSIQGLPNVPQELKDLYKTVWEISQKTIINMAADRSVY 705
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
ID S SLN+ + P GKLTS+HF+ W +GLKTGMYYLR++AA+ AI+FT+D +
Sbjct: 706 IDQSHSLNLFLRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQKI 760
>gi|151944785|gb|EDN63044.1| ribonucleotide reductase, large (R1) subunit [Saccharomyces
cerevisiae YJM789]
gi|190405633|gb|EDV08900.1| ribonucleotide reductase [Saccharomyces cerevisiae RM11-1a]
gi|259145984|emb|CAY79244.1| Rnr1p [Saccharomyces cerevisiae EC1118]
gi|323333854|gb|EGA75244.1| Rnr1p [Saccharomyces cerevisiae AWRI796]
gi|323348888|gb|EGA83125.1| Rnr1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355271|gb|EGA87096.1| Rnr1p [Saccharomyces cerevisiae VL3]
gi|392299768|gb|EIW10860.1| Rnr1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 888
Score = 1088 bits (2815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/775 (63%), Positives = 626/775 (80%), Gaps = 15/775 (1%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG++E V FDKITAR+ +L YGL +H D V V+Q++ +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEPVQFDKITARISRLCYGLDPKHIDAVKVTQRIISGVYEGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AET A MTT HPDYA+LAARI +SNLHK T K FS+ ++D+Y + N +G AP+I+DDV
Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVVEDLYRYVNAATGKPAPMISDDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+I+M+N +L+S I+YDRDF Y YFGFKTLERSYLL++ G+V ERPQH++MRVA+GIH
Sbjct: 121 YNIVMENKDKLNSAIVYDRDFQYSYFGFKTLERSYLLRINGQVAERPQHLIMRVALGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI++A++TY++MS ++FTHASPTLFNAGTP+ Q+SSCFLV MK+DSIEGIYDTLKECA+
Sbjct: 181 RDIEAALETYNLMSLKYFTHASPTLFNAGTPKPQMSSCFLVAMKEDSIEGIYDTLKECAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+F+D+RKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF P APGL+
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEENGTWTLFSPTSAPGLS 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EFE LYT+YEKEG+ K ++AQ LW+ IL++Q ETGTP++++KD CN+KSNQ+NL
Sbjct: 361 DCYGDEFEALYTRYEKEGRG-KTIKAQKLWYSILEAQTETGTPFVVYKDACNRKSNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G IKSSNLC E+++Y++P ETAVCNLAS+ALP ++ S K +
Sbjct: 420 GVIKSSNLCCEIVEYSAPDETAVCNLASVALPAFIET--------------SEDGKTSTY 465
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+F+KL E+ +VT NLN++ID NYYPVE AR+SN+RHRPI +GVQGLADTF+LL +PFDS
Sbjct: 466 NFKKLHEIAKVVTRNLNRVIDRNYYPVEEARKSNMRHRPIALGVQGLADTFMLLRLPFDS 525
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+ LN IFETIY+ ++ S E+A ++GPYET+ GSP S+GILQ DMW P WDW
Sbjct: 526 EEARLLNIQIFETIYHASMEASCELAQKDGPYETFQGSPASQGILQFDMWDQKPYGMWDW 585
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I K+G+RNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +L
Sbjct: 586 DTLRKDIMKHGIRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W +K +I +GS+Q +P +P+ELK +YKTVWEI QKT+++MA DR Y
Sbjct: 646 LRDLVDLGIWDEGMKQYLITQNGSIQGLPNVPQELKDLYKTVWEISQKTIINMAADRSVY 705
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
ID S SLN+ + P GKLTS+HF+ W +GLKTGMYYLR++AA+ AI+FT+D +
Sbjct: 706 IDQSHSLNLFLRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQKI 760
>gi|17555242|ref|NP_499039.1| Protein RNR-1 [Caenorhabditis elegans]
gi|417657|sp|Q03604.1|RIR1_CAEEL RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleotide reductase large subunit
gi|3880121|emb|CAA79574.1| Protein RNR-1 [Caenorhabditis elegans]
Length = 788
Score = 1088 bits (2814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/805 (63%), Positives = 633/805 (78%), Gaps = 26/805 (3%)
Query: 2 YVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAA 61
YVVKRDG++E VHFDKIT+R++KLSYGL+++ DPV V+ KV +G+YKGVTT +LD LAA
Sbjct: 8 YVVKRDGRKEDVHFDKITSRIQKLSYGLNMDFVDPVAVAIKVISGLYKGVTTVELDNLAA 67
Query: 62 ETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVY 121
ETAA+MTT HP+YA LAARI VSNLHK T K FSE +K ++ ++ +G AP+I+D+ +
Sbjct: 68 ETAASMTTQHPEYALLAARIAVSNLHKKTNKVFSEVMKTLHEFHHPHTGKHAPMISDETW 127
Query: 122 DIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKD 181
II KNA +L+S I+YDRD+ Y YFGFKTLERSYLLK+ ++VERPQ MLMRV++GIH D
Sbjct: 128 AIIEKNADKLNSAIVYDRDYSYTYFGFKTLERSYLLKINKEIVERPQQMLMRVSIGIHGD 187
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAII 241
DI SAI+TY++MS+R+ THASPTLFN+GT R Q+SSCFL+ M +DSI GIYDTLK+CA+I
Sbjct: 188 DITSAIETYNLMSERYMTHASPTLFNSGTCRPQMSSCFLLTMSEDSILGIYDTLKQCALI 247
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SKSAGGIG++VH IRATGS I GTNGTSNG++PMLRV+N+TARYVDQGG KR GAFA+YL
Sbjct: 248 SKSAGGIGLNVHKIRATGSVIAGTNGTSNGLIPMLRVYNNTARYVDQGGNKRPGAFAIYL 307
Query: 302 EPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLAD 361
EPWHADIFEF+ LRKN G EE RARDLF ALW+PDLFM+RV+ + WSL CP E PGL D
Sbjct: 308 EPWHADIFEFVSLRKNTGPEEERARDLFLALWIPDLFMKRVEKDQEWSLMCPCECPGLDD 367
Query: 362 CWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG 421
CWG EFE LY KYE EG+ +K V+A+ LW I+ +QIETG PY+ +KD N+KSNQQNLG
Sbjct: 368 CWGEEFEALYAKYEAEGRVRKTVKARKLWEHIVSNQIETGLPYITYKDAANRKSNQQNLG 427
Query: 422 TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFD 481
TIK SNLCTE+I+Y++P E AVCNLASIAL RYV + + FD
Sbjct: 428 TIKCSNLCTEIIEYSAPDEIAVCNLASIALNRYV-------------------TPEKKFD 468
Query: 482 FEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDST 541
F KLAEVT ++T NLNKIIDVNYYPVE AR SN+RHRPIG+GVQGLAD F+L+ PF S
Sbjct: 469 FVKLAEVTKVITRNLNKIIDVNYYPVEEARNSNMRHRPIGLGVQGLADCFMLMRYPFTSA 528
Query: 542 EAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWG 601
EA+ LNK IFETIYY AL S E+A GPY TY GSPVSKG LQ DMWGV P+D+ DW
Sbjct: 529 EARDLNKRIFETIYYAALEASCELAELNGPYSTYEGSPVSKGQLQFDMWGVTPTDQCDWA 588
Query: 602 GLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
LR I+K+G+RNSLL+APMPTAST+QILGNNE EPYTSNIYSRRVLSG+F +VN H+L
Sbjct: 589 TLRKKIAKHGIRNSLLMAPMPTASTAQILGNNESIEPYTSNIYSRRVLSGDFQIVNPHML 648
Query: 662 HDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYI 721
DL E GLW+ +KN++I ++GS+Q I IP ++K +Y+TVWEI QK +++MA DRG YI
Sbjct: 649 KDLVERGLWTDEMKNRLIANNGSIQNIDGIPSDIKELYRTVWEISQKDIIEMAADRGAYI 708
Query: 722 DHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPK 781
D SQSLNIHM +P++ +TS+HF+ W +GLKTGMYYLR++ A +A++FTVD + LK N +
Sbjct: 709 DQSQSLNIHMAKPSYAGITSMHFYGWKKGLKTGMYYLRTKPAVNAVQFTVDKNALKTNQQ 768
Query: 782 VTDDDDAKMAQMVCSLTNREECMAC 806
+ A +A+ + E C+ C
Sbjct: 769 A--ETPATVAE-----SQDEGCLMC 786
>gi|323305248|gb|EGA58995.1| Rnr1p [Saccharomyces cerevisiae FostersB]
Length = 888
Score = 1088 bits (2813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/775 (63%), Positives = 625/775 (80%), Gaps = 15/775 (1%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG++E V FDKITAR+ +L YGL +H D V V+Q++ +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEPVQFDKITARISRLCYGLDPKHIDAVKVTQRIISGVYEGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AET A MTT HPDYA+LAARI +SNLHK T K FS+ ++D+Y + N +G AP+I+DDV
Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVVEDLYRYVNAATGKPAPMISDDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+I+M+N +L+S I+YDRDF Y YFGFKTLERSYLL++ G+V ERPQH++MRVA+GIH
Sbjct: 121 YNIVMENKDKLNSAIVYDRDFQYSYFGFKTLERSYLLRINGQVAERPQHLIMRVALGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI++A++TY++MS ++FTHASPTLFNAGTP+ Q+SSCFLV MK+DSIEGIYDTLKECA+
Sbjct: 181 XDIEAALETYNLMSLKYFTHASPTLFNAGTPKPQMSSCFLVAMKEDSIEGIYDTLKECAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+F+D+RKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF P APGL+
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEENGTWTLFSPTSAPGLS 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EFE LYT+YEKEG+ K ++AQ LW+ IL++Q ETGTP++++KD CN+KSNQ+NL
Sbjct: 361 DCYGDEFEALYTRYEKEGRG-KTIKAQKLWYSILEAQTETGTPFVVYKDACNRKSNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G IKSSNLC E+++Y++P ETAVCNLAS+ALP ++ S K +
Sbjct: 420 GVIKSSNLCCEIVEYSAPDETAVCNLASVALPAFIET--------------SEDGKTSTY 465
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+F+KL E+ +VT NLN++ID NYYPVE AR+SN+RHRPI +GVQGLADTF+LL +PFDS
Sbjct: 466 NFKKLHEIAKVVTRNLNRVIDRNYYPVEEARKSNMRHRPIALGVQGLADTFMLLRLPFDS 525
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+ LN IFETIY ++ S E+A ++GPYET+ GSP S+GILQ DMW P WDW
Sbjct: 526 EEARLLNIQIFETIYXASMEASCELAQKDGPYETFQGSPASQGILQFDMWDQKPYGMWDW 585
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I K+G+RNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +L
Sbjct: 586 DTLRKDIMKHGIRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W +K +I +GS+Q +P +P+ELK +YKTVWEI QKT+++MA DR Y
Sbjct: 646 LRDLVDLGIWDEGMKQYLITQNGSIQGLPNVPQELKDLYKTVWEISQKTIINMAADRSVY 705
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
ID S SLN+ + P GKLTS+HF+ W +GLKTGMYYLR++AA+ AI+FT+D +
Sbjct: 706 IDQSHSLNLFLRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQKI 760
>gi|195146786|ref|XP_002014365.1| GL19156 [Drosophila persimilis]
gi|194106318|gb|EDW28361.1| GL19156 [Drosophila persimilis]
Length = 821
Score = 1088 bits (2813), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/829 (60%), Positives = 643/829 (77%), Gaps = 40/829 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
++VVKRDG+QE VHFDKIT+R++KL Y L+++ DPV ++ +V G+Y GVTT +LD LA
Sbjct: 12 LFVVKRDGRQEEVHFDKITSRIQKLCYNLNMDFVDPVSITLQVINGLYCGVTTQELDNLA 71
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE +A +T NH DYA LAARI VSNLHK TKK FS+ +D++ + N + +P++++
Sbjct: 72 AEISAGLTCNHADYAILAARIAVSNLHKETKKVFSDVFEDLFKNINRETNTASPMVSEFH 131
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+I+ NA RL+S IIYDRDF Y+YFGFKTLERSYLLK+ GK+ ERPQHMLMRVA+GIH
Sbjct: 132 YNIVKNNADRLNSAIIYDRDFGYNYFGFKTLERSYLLKINGKIAERPQHMLMRVALGIHG 191
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDID+A++TY+++S+R+FTHASPTLF A T R QLSSCFL+ M DSIEGI+ ++++CA+
Sbjct: 192 DDIDAAVETYNLLSERYFTHASPTLFAAATNRPQLSSCFLLTMNSDSIEGIFKSVEQCAL 251
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++VH IRA G+ I GTNGTSNG+VPMLRVFN+ ARYVDQGGGKR GAFA+Y
Sbjct: 252 ISKSAGGIGLNVHCIRAKGTSICGTNGTSNGLVPMLRVFNNVARYVDQGGGKRPGAFAIY 311
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+D+FEFLDL++N GKEE+RARDLFYALW+PDLFM+RV++N WSL CP++ PGL
Sbjct: 312 LEPWHSDVFEFLDLKRNTGKEENRARDLFYALWIPDLFMKRVEANESWSLMCPHKCPGLQ 371
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG +FE LY KYE+EG+A + V+AQ LWF I++SQ+ETG PYMLFKD+CN+KSNQQN+
Sbjct: 372 DVWGEKFEELYVKYEQEGRANRTVEAQALWFAIIESQVETGNPYMLFKDSCNRKSNQQNV 431
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++Y++P E AVCNLASIAL +V + + +
Sbjct: 432 GTIKCSNLCTEIVEYSAPDEVAVCNLASIALNMFV-------------------TPEKTY 472
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EVT V +NLNKIID+NYYP+ A++SNLRHRPIGIGVQGLAD IL+ P++S
Sbjct: 473 DFKKLKEVTKTVAKNLNKIIDINYYPLPEAKKSNLRHRPIGIGVQGLADALILMRFPYES 532
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA LN+ IFETIY+ AL S E+A G YETY GSPVSKGILQ DMW P++ WDW
Sbjct: 533 EEAGLLNQQIFETIYFGALEASCELAEEFGVYETYEGSPVSKGILQYDMWDKTPTNLWDW 592
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I K+G+RNSLLVAPMPTAST+QI+GNNE FEPYT+NIY+RRVLSGEF VVN HL
Sbjct: 593 QSLKEDIKKHGIRNSLLVAPMPTASTAQIMGNNESFEPYTTNIYTRRVLSGEFQVVNHHL 652
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE+ LW +KNKII GS+Q I IP++++ +YKTVWEI K+ + MA DRG +
Sbjct: 653 LRDLTELDLWDDEMKNKIISSRGSIQDIETIPQKVRDLYKTVWEISVKSTIKMAADRGAF 712
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD-------- 772
ID SQS N+H+ +PN+GKLTS+HF +W GLKTGMYYLR++ AA+AI+FTVD
Sbjct: 713 IDQSQSFNVHVAEPNYGKLTSIHFFSWKAGLKTGMYYLRTKPAANAIQFTVDKKQAASAL 772
Query: 773 ---------TSVLKENPK----VTDDDDAKMAQMVCSLTNREECMACGS 808
+++L E+ + D + MA+MVCSL N++ C++CGS
Sbjct: 773 NDLNGSFNKSTLLDESTNNSHHIESDRERHMAEMVCSLENKDACLSCGS 821
>gi|170038940|ref|XP_001847305.1| ribonucleoside-diphosphate reductase large subunit [Culex
quinquefasciatus]
gi|167862546|gb|EDS25929.1| ribonucleoside-diphosphate reductase large subunit [Culex
quinquefasciatus]
Length = 838
Score = 1087 bits (2812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 525/857 (61%), Positives = 648/857 (75%), Gaps = 68/857 (7%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG++E VH DKIT+R++KL YGL+++ DPV ++ KV G+Y GVTT +LD LA
Sbjct: 1 MYVFKRDGRKEEVHLDKITSRIQKLCYGLNMDFVDPVAITLKVINGLYTGVTTQELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT H DYA LAAR+ VSNLHK TKK FS+ + D+YN NE K+P+I+D+
Sbjct: 61 AETAATLTTEHADYAILAARLAVSNLHKETKKHFSDVMADLYNMENEFLKTKSPMISDEH 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y IIM NA RL+S IIYDRDF Y+YFGFKTLERSYLLK++GKVVERPQHMLMRVAVGIH
Sbjct: 121 YKIIMDNADRLNSAIIYDRDFGYNYFGFKTLERSYLLKIKGKVVERPQHMLMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DID+AI+TY+++S+R+FTHASPT+F A T R QLSSCFL+ M DDSI+GIYDTLK+CA+
Sbjct: 181 LDIDAAIETYNLLSERYFTHASPTMFAAATRRPQLSSCFLLTMSDDSIDGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+VH IRA G+YI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVNVHCIRAKGTYIAGTNGISNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIFEFLDL+KN GKEE RARD+FYALW+PDLFM+RV++N W L CP++ PGL
Sbjct: 301 LEPWHGDIFEFLDLKKNTGKEEVRARDMFYALWIPDLFMKRVEANEDWCLMCPHDCPGLP 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE+LYT YE EG+ + V+AQ+LWF I++SQ+ETG PYML+KD CN+KSNQQN+
Sbjct: 361 ETWGEEFEKLYTTYENEGRYIRKVKAQDLWFAIIESQVETGVPYMLYKDACNRKSNQQNI 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++Y+S E AVCNLASIA+ +V+ ++ +
Sbjct: 421 GTIKCSNLCTEIVEYSSKDEIAVCNLASIAVNMFVK-------------------PDKSY 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EV+ IVT+NLNKIID+NYYPV A+RSN+RHRPIGIGVQG+AD FIL+ P++S
Sbjct: 462 DFQKLKEVSKIVTKNLNKIIDINYYPVPEAKRSNMRHRPIGIGVQGMADAFILMRFPYES 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ+LN+ IFETIYY AL S EIA ++G YETY G PVSKGILQ DMW PSD WDW
Sbjct: 522 EEAQKLNQQIFETIYYGALEASCEIAEKDGTYETYDGCPVSKGILQYDMWNKAPSDLWDW 581
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K+GVRNSLL+APMPTAST+QILGNNE FEPYTSN+Y+RRVLSGEF VVN HL
Sbjct: 582 APLKEKIAKHGVRNSLLLAPMPTASTAQILGNNESFEPYTSNVYNRRVLSGEFQVVNHHL 641
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE+ LW +KNKII +GS+Q I +IP+ ++ +YKTVWEI KT + MA DRG +
Sbjct: 642 LKDLTELELWDDDMKNKIIASNGSIQHIDEIPKHIRELYKTVWEISVKTCIKMAADRGAF 701
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQS NIH+ +PN+GKLTS+HF+ W GLKTGMYYLR++ A +AI+FTVD L +
Sbjct: 702 IDQSQSFNIHVAEPNYGKLTSIHFYGWKMGLKTGMYYLRTKPAVNAIQFTVDKVKLGQTQ 761
Query: 781 KVTD-------------------------------------------------DDDAKMA 791
+ + + +MA
Sbjct: 762 SAQNGTTSPSKSMLMNGSSTPRKMNGESSMAMADTSAIAAGTAGETSMNGSYAERNRRMA 821
Query: 792 QMVCSLTNREECMACGS 808
+MVCSL N+E+CM CGS
Sbjct: 822 EMVCSLENKEDCMMCGS 838
>gi|126131606|ref|XP_001382328.1| Ribonucleoside-diphosphate reductase large chain 1 [Scheffersomyces
stipitis CBS 6054]
gi|126094153|gb|ABN64299.1| Ribonucleoside-diphosphate reductase large chain 1 [Scheffersomyces
stipitis CBS 6054]
Length = 861
Score = 1087 bits (2812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/777 (65%), Positives = 632/777 (81%), Gaps = 16/777 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG++E V FDKITAR+++L YGL H D V ++Q+V +GVY GVTT +LD LA
Sbjct: 1 MYVNKRDGRKEPVRFDKITARVQRLCYGLDPNHVDAVAITQRVISGVYHGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA LAARI VSNLHK T K +S K++Y++ N ++GL +P+I+ +
Sbjct: 61 AETAAYMTTIHPDYAILAARIAVSNLHKQTTKQYSSVSKELYDYINPKTGLHSPMISKET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YDII+K+ L+S I+YDRDF+Y+YFGFKTLERSYLL++ GKV ERPQH++MRVA+GIH
Sbjct: 121 YDIILKHTDELNSAIVYDRDFNYNYFGFKTLERSYLLRINGKVAERPQHLIMRVAIGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDI+ I++Y++MSQR FTH SPTLFNAGTP Q+SSCFLV MKDDSI+GIYDTLK CA+
Sbjct: 181 DDIEKVIESYNLMSQRLFTHGSPTLFNAGTPSPQMSSCFLVAMKDDSIDGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+ +HNIR+TG+YI GTNGTSNGI+PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLHIHNIRSTGAYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DIF+F+D+RKNHGKEE RARDLF ALW+PDLFM+RV+ N W+LF PNEAPGLA
Sbjct: 301 LEPWHSDIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNADWTLFSPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LY +YE+E + + ++AQ LW+ IL++Q ETGTP+ML+KD CNKKSNQ+NL
Sbjct: 361 DVYGDEFEELYERYERENRGRSTIKAQKLWYSILEAQTETGTPFMLYKDACNKKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G IKSSNLC E+++Y+SP E AVCNLASIALP +V E S L ++
Sbjct: 421 GMIKSSNLCCEIVEYSSPEEVAVCNLASIALPSFV-------EKDDSSL---------WY 464
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+FEKL EVT +VT+NLNKIID NYYPV ARRSN+R+RPI +GVQGLADTF+ L +PFDS
Sbjct: 465 NFEKLHEVTKVVTKNLNKIIDRNYYPVPEARRSNMRNRPIALGVQGLADTFMALRLPFDS 524
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
+A++LN IFETIY+ A+ +S E+A EGPYE+Y GSP SKG+LQ D+W P++ WDW
Sbjct: 525 QQARELNIQIFETIYHAAVESSIELAQIEGPYESYEGSPASKGLLQYDLWDRKPTELWDW 584
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ +SK+G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL+GEF +VN +L
Sbjct: 585 DTLKQNLSKHGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQIVNPYL 644
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W+ +KN II ++GSVQ + +P+E+KA+YKTVWEI QK ++DMA DR +
Sbjct: 645 LRDLVDLGIWNDAMKNNIIANNGSVQGLANVPDEIKALYKTVWEISQKHIIDMAADRAAF 704
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
ID SQSLNIH+ P GKLTS+HF+ W RGLKTGMYYLR++AAA AI+FTVD + K
Sbjct: 705 IDQSQSLNIHIKDPTMGKLTSMHFYGWKRGLKTGMYYLRTQAAAAAIQFTVDKNSAK 761
>gi|319953270|ref|YP_004164537.1| ribonucleoside-diphosphate reductase subunit alpha [Cellulophaga
algicola DSM 14237]
gi|319421930|gb|ADV49039.1| ribonucleoside-diphosphate reductase, alpha subunit [Cellulophaga
algicola DSM 14237]
Length = 825
Score = 1087 bits (2811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/783 (64%), Positives = 631/783 (80%), Gaps = 24/783 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG++E + FDKITAR++KL YGL+ E DP+ VS +V G+Y GVTTS+LD LA
Sbjct: 1 MYVLKRDGRKEPMMFDKITARVRKLCYGLN-ELVDPIKVSMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE +A MTT HPD+A LAARI VSNLHKNTKKSF++T+KD+Y + N R+G K+PL++D+V
Sbjct: 60 AEISATMTTTHPDFAKLAARISVSNLHKNTKKSFADTMKDLYEYVNPRNGKKSPLLSDEV 119
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+ +I +NAA LDS IIY+RDF YDYFGFKTLERSYLLK+ G++ ERPQHMLMRV+VGIH
Sbjct: 120 FKVISENAAFLDSTIIYNRDFGYDYFGFKTLERSYLLKINGQIAERPQHMLMRVSVGIHL 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD+++ ++TY +MS+++FTHA+PTLFN+GTP+ Q+SSCFL+ MKDDSI+GIYDTLK+ A
Sbjct: 180 DDLEAVVETYELMSKKFFTHATPTLFNSGTPKPQMSSCFLLAMKDDSIDGIYDTLKQTAQ 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYI GTNGTSNGIVPML+VFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIAGTNGTSNGIVPMLQVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWHADI+EFLDL+KNHGKEE RARDLFYA+W+PDLFM RV++N W+L CPNE P L
Sbjct: 300 VEPWHADIYEFLDLKKNHGKEEMRARDLFYAMWIPDLFMRRVEANEEWTLMCPNECPDLF 359
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
FE +Y KYE E K +K V+A++LW +IL+SQIETGTPYML+KD N+KSNQ+NL
Sbjct: 360 KHHSEVFETMYLKYEAENKGRKTVKARDLWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++YTSP E AVCNLASIALP ++ KN F
Sbjct: 420 GTIRSSNLCTEIMEYTSPDEVAVCNLASIALPMFI--------------------KNGEF 459
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D ++L VT VT NLNK+ID NYYPV+ A SN+RHRPIG+GVQGLAD FI+L +PF S
Sbjct: 460 DHKELFRVTKRVTRNLNKVIDRNYYPVKEAENSNMRHRPIGLGVQGLADAFIMLRLPFTS 519
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP---SDR 597
A+ LN++IFET+Y+ A+ S E+A EGPY +Y GSP+S+G Q ++WG+ S R
Sbjct: 520 DAAKALNQEIFETLYFAAVTASMEMAKEEGPYSSYEGSPISEGEFQYNLWGIKDEELSGR 579
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWDKLRKEVKKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
KHLL DL +GLW+ +K +++ +GS+Q I IP+++K +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLEDLVHLGLWNESLKQELMRANGSIQHIDIIPQDIKELYKTVWELSMKDIIDMSRQR 699
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
G +ID SQSLN+ M+ NF KLTS+HF+AW GLKTGMYYLR+++A DAIKFT+D + K
Sbjct: 700 GYFIDQSQSLNLFMEGANFSKLTSMHFYAWKSGLKTGMYYLRTKSAVDAIKFTLDNTKKK 759
Query: 778 ENP 780
E P
Sbjct: 760 EVP 762
>gi|409124161|ref|ZP_11223556.1| ribonucleoside-diphosphate reductase large chain [Gillisia sp.
CBA3202]
Length = 824
Score = 1087 bits (2811), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/781 (65%), Positives = 626/781 (80%), Gaps = 24/781 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG +E V FDKITAR++KL YGL+ E DP+ V+ +V G+Y GVTTS+LD LA
Sbjct: 1 MYVLKRDGHKEPVMFDKITARIRKLCYGLN-ELVDPLKVAMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE +A MTT+HPDYA LAARI VSNLHKNTKK+FSE + D++ + N R+G KAPL+AD+V
Sbjct: 60 AEVSATMTTSHPDYAKLAARISVSNLHKNTKKTFSEVMTDLHEYVNPRTGKKAPLLADEV 119
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+I +N LDS IIY+RDF+YDYFGFKTLERSYLLK+ GK+ ERPQHMLMRV++GIH
Sbjct: 120 QKVIQENKELLDSTIIYNRDFNYDYFGFKTLERSYLLKLNGKIAERPQHMLMRVSIGIHI 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDI +AI+TY +MS+++FTHA+PTLFN+GTP+ Q+SSCFL+ MKDDSI+GIYDTLK+ A
Sbjct: 180 DDIAAAIETYDLMSKKFFTHATPTLFNSGTPKPQMSSCFLLTMKDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYI GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYISGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAMY 299
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWHADIF+FLDL+KNHGKEE RARDLFYA+W+PDLFM+RV+ + W+L CPNE PGL
Sbjct: 300 VEPWHADIFDFLDLKKNHGKEEMRARDLFYAMWIPDLFMQRVEKDENWTLMCPNECPGLF 359
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D G EFE LY KYE+EGK +K ++A+ LW +IL+SQIETGTPYML+KD N+KSNQ+NL
Sbjct: 360 DIHGEEFEALYHKYEEEGKGRKSIKARELWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++YTSP E AVCNLASIALP ++ K F
Sbjct: 420 GTIRSSNLCTEIMEYTSPDEVAVCNLASIALPMFI--------------------KGNEF 459
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D ++L ++T V +NLNK+ID NYYPV+ A SN+RHRP+G+GVQGLAD FI L MPF S
Sbjct: 460 DHKELYKITKRVIKNLNKVIDRNYYPVKEAENSNVRHRPVGLGVQGLADAFIKLRMPFTS 519
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSD---R 597
EA+ LN++IFET+Y+ ++ S E+A EGPY +Y GSP+SKG Q +MWG+ D R
Sbjct: 520 DEAKALNQEIFETLYFASVTASMELAIEEGPYSSYEGSPMSKGEFQYNMWGIKDEDLSGR 579
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + KNGVRNSLL+APMPTASTSQILGNNE FEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWAKLRKQVMKNGVRNSLLMAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
KHLL DL E LW+ +KN I+ +GSVQ I IP++LK +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLEDLVERNLWTEDVKNAILRANGSVQGIDIIPQDLKELYKTVWELSMKDIIDMSRQR 699
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
G +ID SQSLN+ M+ N KLTS+HF+AW GLKTGMYYLR+++A DAIKFT+ K
Sbjct: 700 GYFIDQSQSLNLFMENANNSKLTSMHFYAWKSGLKTGMYYLRTKSAVDAIKFTLKKETKK 759
Query: 778 E 778
E
Sbjct: 760 E 760
>gi|444318263|ref|XP_004179789.1| hypothetical protein TBLA_0C04740 [Tetrapisispora blattae CBS 6284]
gi|387512830|emb|CCH60270.1| hypothetical protein TBLA_0C04740 [Tetrapisispora blattae CBS 6284]
Length = 889
Score = 1087 bits (2810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/775 (63%), Positives = 628/775 (81%), Gaps = 14/775 (1%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG++E V FDKITAR+ +L YGL H DPV V+Q++ +GVY+GVTT +LD LA
Sbjct: 1 MYVCKRDGRKEPVRFDKITARVSRLCYGLDSNHIDPVKVTQRIISGVYEGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA+LAAR+ +SNLHK T K FS ++++ N+ N + APL+++++
Sbjct: 61 AETAAYMTTIHPDYATLAARLAISNLHKQTTKLFSTVVEELRNYVNPENNKWAPLVSEEL 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+ + K+ ++S I+YDRDF ++YFGFKTLERSYLLK+ GKV ERPQHM+MRVA+GIH
Sbjct: 121 YETVQKHKDEINSAIVYDRDFQFNYFGFKTLERSYLLKMYGKVAERPQHMIMRVALGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI++A++TY++MSQR+FTHASPTLFNAGTPR Q+SSCFLV MK+DS+EGI+DTLKECA+
Sbjct: 181 EDIEAALETYNLMSQRYFTHASPTLFNAGTPRPQMSSCFLVAMKEDSLEGIFDTLKECAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGG+GV +H+IRATGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GA A++
Sbjct: 241 ISKSAGGLGVHIHDIRATGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAIALF 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIF+F+D+RKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF P+EAPGL+
Sbjct: 301 LEPWHDDIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVKENGDWTLFSPSEAPGLS 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LY +Y +EGK ++ ++AQ LW+ IL++Q ETGTP++ +KD NKKSNQ+NL
Sbjct: 361 DVYGDEFEALYNRYVEEGKGRRTIKAQKLWYSILEAQTETGTPFICYKDAANKKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLC E+I+Y++P ETAVCNLAS+ALP ++++ + + +
Sbjct: 421 GTIKSSNLCCEIIEYSAPDETAVCNLASVALPAFIKK--------------TDDGNSFIY 466
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DFEKL E+T ++T NLNK+ID NYYPV A+ SN+RHRP+ +GVQGLADTF +L +PF+S
Sbjct: 467 DFEKLHEITKVITRNLNKVIDRNYYPVPEAKNSNMRHRPVALGVQGLADTFQILRLPFES 526
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+ LN IFET+Y+ AL S EIAA EGPY TY GSPVS+GILQ DMW V P+D WDW
Sbjct: 527 DEARDLNAHIFETMYHAALEASCEIAAVEGPYSTYEGSPVSQGILQYDMWDVTPTDLWDW 586
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I K+GVRNSLL+APMPTASTSQILG NECFEP+TSN+YSRR LSGEF +VN +L
Sbjct: 587 DSLKANIKKHGVRNSLLLAPMPTASTSQILGYNECFEPFTSNMYSRRTLSGEFQIVNPYL 646
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W +K +I D+GS+QK+P IP+ELK +YKTVWEI QK ++DMA DR +
Sbjct: 647 LRDLVDLGIWDDAMKQHLITDNGSIQKLPNIPQELKELYKTVWEISQKKIIDMAADRSAF 706
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
ID S SLNIH+ P GKLTS+HF+ W +GLKTGMYYLR++AA+ AI+FT+D +
Sbjct: 707 IDQSHSLNIHIQAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDKKI 761
>gi|344234166|gb|EGV66036.1| ribonucleoside-diphosphate reductase large chain 1 [Candida tenuis
ATCC 10573]
Length = 863
Score = 1087 bits (2810), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/808 (61%), Positives = 642/808 (79%), Gaps = 25/808 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KR G +E V FDKITAR+++L YGL +H D V ++Q+V +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRGGHKEPVRFDKITARVQRLCYGLDTKHVDAVAITQRVISGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA LAARI VSNLHK T K +S+ K++Y++ N ++G +P+I+D+
Sbjct: 61 AETAAYMTTIHPDYAILAARIAVSNLHKQTTKQYSQVSKELYDYINPKTGKHSPMISDET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y +I K+A L+S I+YDRDF+Y+YFGFKTLERSYLL++ GKV ERPQH++MRVAVGIH
Sbjct: 121 YAVIQKHADELNSAIVYDRDFNYNYFGFKTLERSYLLRIDGKVAERPQHLIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDI+ I+TY+ MSQR+FTH SPTLFNAGTP Q+SSCFLV MK+DSI+GIYDTLK CA+
Sbjct: 181 DDIERVIETYNYMSQRYFTHGSPTLFNAGTPSPQMSSCFLVAMKEDSIDGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+ +HNIR+TG+YI GTNGTSNGI+PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLHIHNIRSTGAYIAGTNGTSNGIIPMIRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+F+D+RKNHGKEE RARDLF ALW+PDLFMERV++NG W+LF PNEAPGLA
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMERVEANGDWTLFSPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ +G EF++LY KYE+E + ++ ++AQ LW+ +L++Q ETGTP+ML+KD CN K+NQ+NL
Sbjct: 361 EVYGDEFKQLYEKYERENRGRQTIKAQKLWYAVLEAQTETGTPFMLYKDACNLKTNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLC E+++Y+ P E +VCNLASIALP +V + ++
Sbjct: 421 GTIKSSNLCCEIVEYSDPEEVSVCNLASIALPSFVET----------------DETSAWY 464
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+FEKL +++ +VT NLN+IID NYYPV A+RSN+R+RPI +GVQGLAD F+ L +PFDS
Sbjct: 465 NFEKLHDISKVVTRNLNRIIDRNYYPVPEAKRSNMRNRPIALGVQGLADAFMALRLPFDS 524
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LN IFETIY+ A+ S E+AA EG YE+Y GSP S+G+LQ D+W P++ WDW
Sbjct: 525 QEAKELNIQIFETIYHGAVEASIELAATEGAYESYPGSPASQGLLQYDLWNRKPTELWDW 584
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ ++K+G+RNSLLVAPMPTASTSQILGNNECFEPYTSN+YSRRVLSGEF +VN +L
Sbjct: 585 DTLKQKMAKHGLRNSLLVAPMPTASTSQILGNNECFEPYTSNMYSRRVLSGEFQIVNPYL 644
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++GLW+ +KN II ++GS+Q + IP+++KA+YKTVWEI QK ++DMA DR +
Sbjct: 645 LKDLVDLGLWNESMKNNIISNNGSIQGLTNIPDQIKALYKTVWEISQKHIIDMAADRAAF 704
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ P GKLTS+HF+ W +GLKTGMYYLR++AAA AI+FT+D +N
Sbjct: 705 IDQSQSLNIHIKDPTMGKLTSMHFYGWKKGLKTGMYYLRTQAAAAAIQFTID-----KNS 759
Query: 781 KVTDDDDAKMAQMVCSLTNREECMACGS 808
+ +D +M+ N+ + A GS
Sbjct: 760 IASANDTVAALEML----NKRKYKAVGS 783
>gi|383280241|pdb|3TB9|A Chain A, Structure Of Yeast Ribonucleotide Reductase 1 Q288a With
Amppnp And Cdp
gi|383280242|pdb|3TBA|A Chain A, Structure Of Yeast Ribonucleotide Reductase 1 Q288a With
Dgtp And Adp
Length = 888
Score = 1086 bits (2809), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/775 (63%), Positives = 625/775 (80%), Gaps = 15/775 (1%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG++E V FDKITAR+ +L YGL +H D V V+Q++ +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEPVQFDKITARISRLCYGLDPKHIDAVKVTQRIISGVYEGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AET A MTT HPDYA+LAARI +SNLHK T K FS+ ++D+Y + N +G AP+I+DDV
Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVVEDLYRYVNAATGKPAPMISDDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+I+M+N +L+S I+YDRDF Y YFGFKTLERSYLL++ G+V ERPQH++MRVA+GIH
Sbjct: 121 YNIVMENKDKLNSAIVYDRDFQYSYFGFKTLERSYLLRINGQVAERPQHLIMRVALGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI++A++TY++MS ++FTHASPTLFNAGTP+ Q+SSCFLV MK+DSIEGIYDTLKECA+
Sbjct: 181 RDIEAALETYNLMSLKYFTHASPTLFNAGTPKPQMSSCFLVAMKEDSIEGIYDTLKECAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIR+TGSYI GTNGTSNG++PM+RVFN+TARYVD GG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDAGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+F+D+RKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF P APGL+
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEENGTWTLFSPTSAPGLS 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EFE LYT+YEKEG+ K ++AQ LW+ IL++Q ETGTP++++KD CN+KSNQ+NL
Sbjct: 361 DCYGDEFEALYTRYEKEGRG-KTIKAQKLWYSILEAQTETGTPFVVYKDACNRKSNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G IKSSNLC E+++Y++P ETAVCNLAS+ALP ++ S K +
Sbjct: 420 GVIKSSNLCCEIVEYSAPDETAVCNLASVALPAFIET--------------SEDGKTSTY 465
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+F+KL E+ +VT NLN++ID NYYPVE AR+SN+RHRPI +GVQGLADTF+LL +PFDS
Sbjct: 466 NFKKLHEIAKVVTRNLNRVIDRNYYPVEEARKSNMRHRPIALGVQGLADTFMLLRLPFDS 525
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+ LN IFETIY+ ++ S E+A ++GPYET+ GSP S+GILQ DMW P WDW
Sbjct: 526 EEARLLNIQIFETIYHASMEASCELAQKDGPYETFQGSPASQGILQFDMWDQKPYGMWDW 585
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I K+GVRNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +L
Sbjct: 586 DTLRKDIMKHGVRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W +K +I +GS+Q +P +P+ELK +YKTVWEI QKT+++MA DR Y
Sbjct: 646 LRDLVDLGIWDEGMKQYLITQNGSIQGLPNVPQELKDLYKTVWEISQKTIINMAADRSVY 705
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
ID S SLN+ + P GKLTS+HF+ W +GLKTGMYYLR++AA+ AI+FT+D +
Sbjct: 706 IDQSHSLNLFLRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQKI 760
>gi|213409966|ref|XP_002175753.1| ribonucleoside-diphosphate reductase large chain
[Schizosaccharomyces japonicus yFS275]
gi|212003800|gb|EEB09460.1| ribonucleoside-diphosphate reductase large chain
[Schizosaccharomyces japonicus yFS275]
Length = 824
Score = 1086 bits (2809), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/778 (66%), Positives = 632/778 (81%), Gaps = 20/778 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG++E V FDKITAR+ +L YGL EH D V+Q+V +GVY GVTT +LD LA
Sbjct: 1 MFVYKRDGRKEKVQFDKITARVSRLCYGLDPEHVDAAAVTQRVISGVYPGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA LAARI VSNLHK T K+FS ++ +++ N ++G AP+I+D+V
Sbjct: 61 AETAATMTTKHPDYAILAARIAVSNLHKQTDKAFSSVVQKLHDWVNPKTGKHAPMISDEV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+I+MK+ LDS IIYDRDF Y+YFGFKTLERSYLL++ GKV ERPQH++MRVAVGIH
Sbjct: 121 YEIVMKHKDELDSAIIYDRDFTYNYFGFKTLERSYLLRIDGKVAERPQHLIMRVAVGIHH 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDI++AI+TY+ MSQR+FTHASPTLFNAGTPR QLSSCFLV MKDDSIEGIY+TLK CA+
Sbjct: 181 DDIEAAIETYNYMSQRYFTHASPTLFNAGTPRPQLSSCFLVTMKDDSIEGIYETLKTCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+++HNIRATGSYI GTNGTSNGIVPMLRVFN+TARYVDQGG KR GAFA Y
Sbjct: 241 ISKTAGGIGINIHNIRATGSYIAGTNGTSNGIVPMLRVFNNTARYVDQGGNKRPGAFAAY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH D+ +F++LRK HGKEE RAR+LFYALW+PDLFM RV+ N WS FCPNEAPGLA
Sbjct: 301 LEPWHPDVLDFVELRKTHGKEEMRARELFYALWIPDLFMRRVEKNEQWSFFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG EFE LY +YE+EG+A++V+ AQ +W+EI+++Q ETG P+ML+KD+CN+KSNQ+NL
Sbjct: 361 DVWGEEFEELYERYEREGRARRVLPAQKVWYEIIRAQSETGNPFMLYKDSCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+ SNLCTE+++Y+SP E AVCNLASIALP ++ H K +
Sbjct: 421 GTIRCSNLCTEIVEYSSPDEVAVCNLASIALPMFI---------HDGK-----------Y 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF++L V +VT NLN++IDVNYYPV ARRSNLRHRP+G+GVQGLAD F L P++S
Sbjct: 461 DFQQLHNVAKVVTRNLNRVIDVNYYPVPEARRSNLRHRPVGLGVQGLADAFFKLRYPYES 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LN IFETIY+ AL S E+AA EGPYETY GSP S+GILQ DMW V P+D WDW
Sbjct: 521 PEARKLNLLIFETIYHAALEASCELAAEEGPYETYEGSPASQGILQYDMWNVTPTDLWDW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+K+G+RNSLLVAPMPTASTSQILG NECFEPYTSN+Y RRVLSGEF +VN L
Sbjct: 581 ASLKAKIAKHGLRNSLLVAPMPTASTSQILGFNECFEPYTSNMYQRRVLSGEFQIVNPWL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++GLW +KNK++ DGS+Q IP+IP++LK +YKTVWEI Q+T++D A DRG +
Sbjct: 641 LRDLVDLGLWDEEMKNKLVLYDGSIQAIPEIPQDLKNLYKTVWEISQRTVIDYAADRGAF 700
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE 778
ID SQSLNIH+ P+FGK+TS+HF+ W +GLKTGMYYLR+ AA+ AIKFTVD +K+
Sbjct: 701 IDQSQSLNIHIKDPSFGKITSMHFYGWKKGLKTGMYYLRTMAASAAIKFTVDPLSVKQ 758
>gi|383875419|pdb|3S8A|A Chain A, Structure Of Yeast Ribonucleotide Reductase R293a With
Dgtp
gi|383875421|pdb|3S8C|A Chain A, Structure Of Yeast Ribonucleotide Reductase 1 R293a With
Amppnp And Cdp
Length = 888
Score = 1086 bits (2808), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/775 (63%), Positives = 625/775 (80%), Gaps = 15/775 (1%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG++E V FDKITAR+ +L YGL +H D V V+Q++ +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEPVQFDKITARISRLCYGLDPKHIDAVKVTQRIISGVYEGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AET A MTT HPDYA+LAARI +SNLHK T K FS+ ++D+Y + N +G AP+I+DDV
Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVVEDLYRYVNAATGKPAPMISDDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+I+M+N +L+S I+YDRDF Y YFGFKTLERSYLL++ G+V ERPQH++MRVA+GIH
Sbjct: 121 YNIVMENKDKLNSAIVYDRDFQYSYFGFKTLERSYLLRINGQVAERPQHLIMRVALGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI++A++TY++MS ++FTHASPTLFNAGTP+ Q+SSCFLV MK+DSIEGIYDTLKECA+
Sbjct: 181 RDIEAALETYNLMSLKYFTHASPTLFNAGTPKPQMSSCFLVAMKEDSIEGIYDTLKECAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG K GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKAPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+F+D+RKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF P APGL+
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEENGTWTLFSPTSAPGLS 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EFE LYT+YEKEG+ K ++AQ LW+ IL++Q ETGTP++++KD CN+KSNQ+NL
Sbjct: 361 DCYGDEFEALYTRYEKEGRG-KTIKAQKLWYSILEAQTETGTPFVVYKDACNRKSNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G IKSSNLC E+++Y++P ETAVCNLAS+ALP ++ S K +
Sbjct: 420 GVIKSSNLCCEIVEYSAPDETAVCNLASVALPAFIET--------------SEDGKTSTY 465
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+F+KL E+ +VT NLN++ID NYYPVE AR+SN+RHRPI +GVQGLADTF+LL +PFDS
Sbjct: 466 NFKKLHEIAKVVTRNLNRVIDRNYYPVEEARKSNMRHRPIALGVQGLADTFMLLRLPFDS 525
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+ LN IFETIY+ ++ S E+A ++GPYET+ GSP S+GILQ DMW P WDW
Sbjct: 526 EEARLLNIQIFETIYHASMEASCELAQKDGPYETFQGSPASQGILQFDMWDQKPYGMWDW 585
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I K+GVRNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +L
Sbjct: 586 DTLRKDIMKHGVRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W +K +I +GS+Q +P +P+ELK +YKTVWEI QKT+++MA DR Y
Sbjct: 646 LRDLVDLGIWDEGMKQYLITQNGSIQGLPNVPQELKDLYKTVWEISQKTIINMAADRSVY 705
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
ID S SLN+ + P GKLTS+HF+ W +GLKTGMYYLR++AA+ AI+FT+D +
Sbjct: 706 IDQSHSLNLFLRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQKI 760
>gi|405962741|gb|EKC28390.1| Ribonucleoside-diphosphate reductase large subunit [Crassostrea
gigas]
Length = 790
Score = 1086 bits (2808), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 523/808 (64%), Positives = 630/808 (77%), Gaps = 35/808 (4%)
Query: 7 DGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAA 66
DG+QE V FDKIT+R+ KL YGL + DP ++ KV G+Y GVTT +LD LAAETAA
Sbjct: 12 DGRQEKVMFDKITSRISKLCYGLHADFVDPAAITLKVINGLYPGVTTVELDNLAAETAAT 71
Query: 67 MTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMK 126
MTT HPDYA LAARI VSNLHK TKK FS+ + D+Y N ++ +P+I+ +++ IIMK
Sbjct: 72 MTTKHPDYAILAARIAVSNLHKETKKVFSDVMDDLYKWINPKTNKHSPMISPEIHSIIMK 131
Query: 127 NAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSA 186
NA RL+S II+DRDF+Y YFGFKTLERSYLL++ GKV ERPQHMLMRVAVGIH +DID A
Sbjct: 132 NADRLNSAIIFDRDFNYQYFGFKTLERSYLLRINGKVAERPQHMLMRVAVGIHHNDIDGA 191
Query: 187 IKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAG 246
I+TY+++S++WFTHASPTLFNAGT R QLSS IEGIYDTLK+CA+ISKSAG
Sbjct: 192 IETYNLLSEKWFTHASPTLFNAGTNRPQLSS----------IEGIYDTLKQCALISKSAG 241
Query: 247 GIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHA 306
GIG++VH IR+TGSYI GTNGTSNG++PMLRV+N+TARYVDQGG KR GAFA+YLEPWHA
Sbjct: 242 GIGLNVHCIRSTGSYIAGTNGTSNGLLPMLRVYNNTARYVDQGGNKRPGAFAIYLEPWHA 301
Query: 307 DIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTE 366
D+F FLD +KN GKEE RARDLFYA+W+PDLFM+RV+ N W+L P+E PGL DCWG E
Sbjct: 302 DVFMFLDCKKNTGKEEQRARDLFYAMWIPDLFMKRVEKNEEWTLMDPHECPGLHDCWGEE 361
Query: 367 FERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSS 426
FE LY KYE+EGK +K ++AQ LW+ I+++Q ETGTPYML+KD CN+KSNQQNLGTIK S
Sbjct: 362 FETLYQKYEQEGKGRKTIKAQQLWYAIIEAQTETGTPYMLYKDHCNRKSNQQNLGTIKCS 421
Query: 427 NLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLA 486
NLCTE+++Y+SP E AVCNLASIAL YV+ ++ +DFEKL
Sbjct: 422 NLCTEIVEYSSPDEVAVCNLASIALNMYVK-------------------PDKTYDFEKLK 462
Query: 487 EVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQL 546
VT ++ NLNKIID+NYYPV A RSN+RHRPIGIGVQGLAD FIL+ PF+S EAQ L
Sbjct: 463 SVTKVIVRNLNKIIDINYYPVPEAERSNMRHRPIGIGVQGLADAFILMRYPFESEEAQLL 522
Query: 547 NKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDM 606
NK IFETIYY AL S E+A R+GPYETY G PVSKGILQ DMW V P+D DW LR
Sbjct: 523 NKQIFETIYYAALEASCELAERDGPYETYQGCPVSKGILQHDMWNVTPTDLHDWNSLRAK 582
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
I K+G+RNSLL+APMPTAST+QILGNNE E YTSNIYSRRVLSGEF VVN+HL+ D+TE
Sbjct: 583 IKKHGIRNSLLLAPMPTASTAQILGNNESIEAYTSNIYSRRVLSGEFQVVNQHLMKDMTE 642
Query: 667 MGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQS 726
GLW +KNKII GS+Q I +IP+E++ +YKTVWEI QKT++ MA DRG +ID SQS
Sbjct: 643 RGLWDDDMKNKIIAYGGSIQNIEKIPKEIRDLYKTVWEISQKTVLKMAADRGAFIDQSQS 702
Query: 727 LNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE------NP 780
LNIH+ +PN+GKLTS+HF+AW GLKTGMYYLR++ AA AIKFTVD + L +
Sbjct: 703 LNIHIAEPNYGKLTSMHFYAWKLGLKTGMYYLRTKPAASAIKFTVDKTKLTQPSGKSAAE 762
Query: 781 KVTDDDDAKMAQMVCSLTNREECMACGS 808
+ ++ MA MVCSL N+E+CM CGS
Sbjct: 763 QEMEETTQNMAAMVCSLQNKEDCMMCGS 790
>gi|365961082|ref|YP_004942649.1| ribonucleoside-diphosphate reductase subunit alpha [Flavobacterium
columnare ATCC 49512]
gi|365737763|gb|AEW86856.1| ribonucleoside-diphosphate reductase subunit alpha [Flavobacterium
columnare ATCC 49512]
Length = 803
Score = 1085 bits (2807), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/824 (62%), Positives = 647/824 (78%), Gaps = 37/824 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDG +E V FDKIT R+KKL YGL+ + D V V+ +V G+Y GVTTS+LD LA
Sbjct: 1 MYVVKRDGHKEPVMFDKITDRIKKLCYGLN-DMVDAVKVAMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAAAMT HPDYA LAARI +SNLHKNTKKSFSET+ DM+++ + R+G APLI+D+V
Sbjct: 60 AETAAAMTVTHPDYAQLAARIAISNLHKNTKKSFSETMNDMFHYVSPRTGKDAPLISDEV 119
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+ IIM+N+A LDS IIY+RDF+YDYFGFKTLERSYLLK+ GK+ ERPQHMLMRVA+GIH
Sbjct: 120 HKIIMENSAFLDSHIIYNRDFNYDYFGFKTLERSYLLKINGKIAERPQHMLMRVAIGIHL 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+D++SAI+TY +MS+++FTHA+PTLFNAGTP+ Q+SSCFL+ M+DDSI+GIYDTLK+ A
Sbjct: 180 NDLESAIETYELMSKKFFTHATPTLFNAGTPKPQMSSCFLLAMQDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+E WHADI +FLDL+KNHGKEE RARDLFYA+W DLFM+RV+S+ W+L CPNE PGL
Sbjct: 300 IETWHADIMDFLDLKKNHGKEEMRARDLFYAMWTSDLFMKRVESDDKWTLMCPNECPGLY 359
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LYTKYE E + +K ++A+ LW +IL+SQIETGTPYML+KD N+KSNQ+NL
Sbjct: 360 DVYGDEFEALYTKYENEARGRKTIKARELWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++YTS E AVCNLAS++LP +V E F
Sbjct: 420 GTIRSSNLCTEIMEYTSADEIAVCNLASLSLPMFVDEGK--------------------F 459
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+ E L +VT VT NLNK+ID NYYPV+ A SN+RHRPIG+GVQGLAD FI+L MPF S
Sbjct: 460 NHELLYKVTKRVTRNLNKVIDRNYYPVKEAENSNMRHRPIGLGVQGLADAFIMLRMPFTS 519
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP---SDR 597
+A++LN++IFET+Y+ A+ TS E+A EGPY T+ GSP+S+G Q ++WGV S R
Sbjct: 520 DDAKKLNQEIFETMYFAAVETSMEMAKEEGPYSTFKGSPISEGQFQYNLWGVTDEELSGR 579
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + + GVRNSLL+APMPTASTSQILGNNE FEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWASLRKEVIEYGVRNSLLMAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
KHLL DL + GLW+ +K +I+ +GSVQ I +IP++LK +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLEDLVKCGLWNEDLKQEIMRHNGSVQNIDRIPQDLKDLYKTVWEMSMKDIIDMSRQR 699
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD----T 773
G +ID SQSLN+ M+ F KLTS+HF+AW GLKTGMYYLR++AA DAIKFT++ T
Sbjct: 700 GYFIDQSQSLNLFMEGATFSKLTSMHFYAWKSGLKTGMYYLRTKAAVDAIKFTLNNEKKT 759
Query: 774 SVLKENPK---VTDDDDAKMAQMVCSLTNR------EECMACGS 808
E+PK + + A+ ++ R E+C CGS
Sbjct: 760 EPTIESPKELELVAPEGEMAAEEFRAMIERSRNAEPEDCEMCGS 803
>gi|86134367|ref|ZP_01052949.1| ribonucleoside-diphosphate reductase large subunit [Polaribacter
sp. MED152]
gi|85821230|gb|EAQ42377.1| ribonucleoside-diphosphate reductase large subunit [Polaribacter
sp. MED152]
Length = 799
Score = 1085 bits (2807), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 524/815 (64%), Positives = 646/815 (79%), Gaps = 23/815 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDGK+E V FDKITAR+KK+ YGL+ + DPV V+ +V G+Y GVTTS+LD LA
Sbjct: 1 MYVVKRDGKKEPVMFDKITARVKKMCYGLN-KIVDPVKVAMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA LAARI VSNLHKNTKKSFSET+ D+Y + N R+ KAPL+ADDV
Sbjct: 60 AETAATMTTAHPDYAKLAARIAVSNLHKNTKKSFSETMDDLYFYVNPRTEKKAPLLADDV 119
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+II NA +LDS IIY+RDF+YDYFGFKTLERSYLLK+ G++ ERPQHMLMRV++GIHK
Sbjct: 120 YEIIKANAEKLDSTIIYNRDFNYDYFGFKTLERSYLLKLNGQIAERPQHMLMRVSIGIHK 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID AI TY +MS+++FTHA+PTLFN+GTP+ Q+SSCFL+ M+DDSIEGIYDTLK+ A
Sbjct: 180 NDIDEAIATYELMSKKYFTHATPTLFNSGTPKPQMSSCFLLQMQDDSIEGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HNIRATGSYI GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSLHNIRATGSYIAGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAMY 299
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+FLDL+KNHGKEE RARDLFYA+W+ DLFM+RVQ +G W+L CP+E P L
Sbjct: 300 LEPWHADIFDFLDLKKNHGKEEMRARDLFYAMWISDLFMKRVQEDGEWTLMCPHECPHLY 359
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFERLYT YE GK +K ++A+ LW +IL+SQIETGTPYML+KD N+K+NQ+NL
Sbjct: 360 DTYGEEFERLYTSYEAAGKGRKTIKARELWEKILESQIETGTPYMLYKDAVNRKTNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++YT+ E AVCNLASIALP +V E R + +YF
Sbjct: 420 GTIRSSNLCTEIMEYTAKDEVAVCNLASIALPMFVSE---------------RENGEKYF 464
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+ +KL +VT VT NL+ +ID N+YPV+ A SN RHRP+G+G+QGLADTFI L +PF S
Sbjct: 465 NHKKLFDVTKKVTRNLDTVIDANFYPVKEAENSNFRHRPVGLGIQGLADTFINLRLPFTS 524
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP---SDR 597
EA++LN+DIFET+YY A+ +S EIA + PY T+ GSP+S+G Q +MWGVN S
Sbjct: 525 DEAKKLNQDIFETMYYAAVTSSMEIAKAKEPYSTFKGSPMSEGEFQFNMWGVNDNELSGN 584
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + K GVRNSLLVAPMPTASTSQILGNNE FEPYTSNIY+RRVLSGEF+VVN
Sbjct: 585 WDWDKLRKNVMKYGVRNSLLVAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 644
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
KHLL DL E+GLW +K I+ +GS+Q I +IP EL+ +YKTVWE+ K ++DMA R
Sbjct: 645 KHLLEDLVELGLWDNDMKESIMRANGSIQHIEEIPSELRELYKTVWEMSMKDIIDMARHR 704
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD----T 773
G +ID SQSLN+ + P++GKLTS+HF+AW GLKTGMYYLR+++A +AI+FTV
Sbjct: 705 GYFIDQSQSLNLFLKDPDYGKLTSMHFYAWKSGLKTGMYYLRTKSAVNAIQFTVSKEKKA 764
Query: 774 SVLKENPKVTDDDDAKMAQMVCSLTNREECMACGS 808
V++E +T + M ++C+ CGS
Sbjct: 765 EVIEEEKPMTPAEFKAMVDASKGAGPDDDCLMCGS 799
>gi|241854846|ref|XP_002415982.1| ribonucleotide reductase, alpha subunit, putative [Ixodes
scapularis]
gi|215510196|gb|EEC19649.1| ribonucleotide reductase, alpha subunit, putative [Ixodes
scapularis]
Length = 766
Score = 1085 bits (2806), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/776 (65%), Positives = 633/776 (81%), Gaps = 21/776 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+VVKR+G+ E++HFDKIT+R+ KL YGL+ + DP +++QKV G+Y GVTT +LD LA
Sbjct: 10 MFVVKRNGRHESIHFDKITSRISKLCYGLNTDFVDPCVITQKVIVGLYPGVTTVELDNLA 69
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA LAAR+ +SNLHK TKK FSE + D+Y+ NE +G P+I+++
Sbjct: 70 AETAATMTTKHPDYAILAARLAISNLHKETKKVFSEVMTDLYHMVNETNGKSTPMISEET 129
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y I+M NA L+S I+YDRDF+Y+YFGFKTLER++LLK+ GKVVERPQHMLMRV++GIH
Sbjct: 130 YKIVMNNADFLNSSIVYDRDFNYNYFGFKTLERAHLLKINGKVVERPQHMLMRVSIGIHG 189
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD+ SAI+TY++MS++WFT ASPTLFNAGTP+ QLSSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 190 DDLSSAIETYNLMSEKWFTQASPTLFNAGTPKPQLSSCFLLQMKDDSIEGIYDTLKQCAL 249
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+++HNIRA+GSYI GTNGTSNGIVPMLRV+N+TARYVDQGG KR GA A+Y
Sbjct: 250 ISKSAGGIGINIHNIRASGSYIAGTNGTSNGIVPMLRVYNNTARYVDQGGNKRPGAIAIY 309
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+F+FLDL+KN GKEE RARDLFY LW+PDLFM+RV+ +G+WSL CP+E+P L
Sbjct: 310 LEPWHADVFDFLDLKKNTGKEESRARDLFYGLWIPDLFMKRVEEDGIWSLMCPHESPHLQ 369
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G +FE+LY +YE E + ++ V+AQ LW I++SQ ETGTPYML+KD CN+KSNQ+N+
Sbjct: 370 DVYGEDFEKLYVRYETEKRYRRQVRAQQLWSAIIESQTETGTPYMLYKDACNRKSNQKNV 429
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YTS E AVCNLASIAL R+V + +F
Sbjct: 430 GTIKCSNLCTEIVEYTSVDEVAVCNLASIALNRFVY--------------------HGHF 469
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DFEKL +VT +VT NLNKIIDVNYYP+ A+ SN+RHRPIGIGVQGLAD FILL +PFD
Sbjct: 470 DFEKLRQVTRVVTRNLNKIIDVNYYPIPEAKLSNMRHRPIGIGVQGLADAFILLRLPFDC 529
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA ++NK IFETIYY AL S E++ + GPYETY GSPVS+GILQ DMW V PS+ WDW
Sbjct: 530 DEACEINKKIFETIYYGALEESCELSKKFGPYETYPGSPVSQGILQYDMWNVTPSNLWDW 589
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I G+RNSLLVAPMPTAST+QILGNNE EPYTSN+Y+RRVLSGEF +VN HL
Sbjct: 590 SALKERIKSFGIRNSLLVAPMPTASTAQILGNNEAMEPYTSNVYTRRVLSGEFQIVNHHL 649
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLT +GLW+ +KN++I ++GSVQK+ IP+ELK +Y+TVWEI QK +++M+ DRG +
Sbjct: 650 LKDLTRLGLWNDNLKNELIANNGSVQKL-NIPKELKMLYRTVWEISQKNILEMSADRGAF 708
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
+D SQSLNIH+ QP +GKLTS+HF W GLKTGMYYLR++ A +AI+FTVD S+L
Sbjct: 709 VDQSQSLNIHIAQPTYGKLTSMHFCGWKLGLKTGMYYLRTKPAVNAIQFTVDKSLL 764
>gi|389739083|gb|EIM80277.1| hypothetical protein STEHIDRAFT_105343 [Stereum hirsutum FP-91666
SS1]
Length = 917
Score = 1084 bits (2804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 500/791 (63%), Positives = 628/791 (79%), Gaps = 20/791 (2%)
Query: 2 YVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAA 61
YV KR ++E++ DK+TAR+KKLSYGL H D V+QKV GVY G+TTS+LD LAA
Sbjct: 15 YVFKRGKRKESIQADKLTARVKKLSYGLDDMHLDANEVTQKVIQGVYPGITTSELDNLAA 74
Query: 62 ETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVY 121
ETAA +TT HPDYA LAARI VSNLHK TK+SFS+TI D+Y++ N ++G A +I+D+ Y
Sbjct: 75 ETAAYLTTKHPDYAILAARIAVSNLHKTTKESFSQTISDLYHYVNPKTGRAAGMISDETY 134
Query: 122 DIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKD 181
+ ++A RLDS I++ RDF+Y++FG+KTLERSYLLK+ G+ ERPQH+LMRVA GIH +
Sbjct: 135 KFVNEHAERLDSAIVWSRDFEYNFFGYKTLERSYLLKINGRTAERPQHLLMRVACGIHPN 194
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAII 241
DID A+++Y +MSQR+FTH SPTLFNAGTP QL+SCFLVCMKDDSIEGIYDTLK CA+I
Sbjct: 195 DIDRALESYTLMSQRYFTHGSPTLFNAGTPNPQLASCFLVCMKDDSIEGIYDTLKSCAMI 254
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SKSAGGIG+++HNIRATGSYI GTNG SNGIVPMLR F+ TARYVDQGG KR GAFA+YL
Sbjct: 255 SKSAGGIGLNIHNIRATGSYIAGTNGYSNGIVPMLRAFDATARYVDQGGNKRPGAFAIYL 314
Query: 302 EPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLAD 361
EPWHAD+FEFLDLRKNHGKEE RARDLFYALW+PDLFM+R+ NG WSLF P+EAPGL +
Sbjct: 315 EPWHADVFEFLDLRKNHGKEEVRARDLFYALWIPDLFMKRIGENGNWSLFSPDEAPGLHE 374
Query: 362 CWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG 421
+G EFE LY KYE+EGKA K + AQ LW+ I+ +QIETG P+M +KD N+K+NQ+NLG
Sbjct: 375 VYGDEFEALYEKYEREGKAMKTIPAQKLWYAIMDAQIETGGPFMCYKDAANRKTNQKNLG 434
Query: 422 TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFD 481
IKSSNLCTE+++Y++P ETAVCNLAS+ALP ++ +N ++
Sbjct: 435 VIKSSNLCTEIMEYSAPDETAVCNLASLALPSFI--------------------ENGVYN 474
Query: 482 FEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDST 541
F+KL +VT +VT NLN++ID+N+YP+ AR SN+RHRPIG+GVQGLAD F++L MPFDS
Sbjct: 475 FQKLHDVTKVVTYNLNRVIDLNFYPIPEARNSNMRHRPIGLGVQGLADAFMILRMPFDSD 534
Query: 542 EAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWG 601
EA++LN IFETIY+ A+ S +IA EG Y +Y GSP SKG LQ D+WGV PS+ WDW
Sbjct: 535 EARKLNLQIFETIYHAAVEASCDIAKVEGAYASYEGSPASKGELQFDLWGVKPSELWDWA 594
Query: 602 GLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
L+ ++++G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVL+GEF VV LL
Sbjct: 595 ELKAKVAQHGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLAGEFQVVCPWLL 654
Query: 662 HDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYI 721
+L + LW +KN+II +GSVQ IP+IP+++KAIYKTVWEI QK ++D+A DRG +I
Sbjct: 655 RELIRLDLWDDNMKNRIIAHNGSVQYIPEIPDDVKAIYKTVWEISQKKVLDLAADRGAFI 714
Query: 722 DHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPK 781
SQSLNIH+ P G+LTS+HF+ W RGLKTGMYYLR++ A+ AI+FT+D +++KE K
Sbjct: 715 CQSQSLNIHLQAPTVGQLTSMHFYGWKRGLKTGMYYLRTKPASQAIQFTLDHNLVKETKK 774
Query: 782 VTDDDDAKMAQ 792
D + A+
Sbjct: 775 AQDKRGVQKAE 785
>gi|447146|prf||1913428A ribonucleotide reductase:SUBUNIT=large
Length = 811
Score = 1084 bits (2804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/831 (62%), Positives = 643/831 (77%), Gaps = 43/831 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG+QE V FDKITAR+ +L YGL +H DPV ++QKV +GVY GVTT +LD LA
Sbjct: 1 MFVYKRDGRQEKVAFDKITARVSRLCYGLDSDHVDPVEITQKVISGVYPGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA LAARI VSNLHK T+K FS ++ ++++ N ++ AP+I+D +
Sbjct: 61 AETAATMTTKHPDYAILAARIAVSNLHKQTEKVFSTVVQQLHDYVNPKTDKPAPMISDKI 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YDI+MK+ LDS IIYDRDF Y++FGFKTLERSYLL++ GKV ERPQHM+MRVAVGIH
Sbjct: 121 YDIVMKHKDELDSAIIYDRDFTYNFFGFKTLERSYLLRIDGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI++AI+TY++MSQR+FTHASPTLFNAGTPR QLSSCFLV MKDDSIEGIYDTLK CA+
Sbjct: 181 EDIEAAIETYNLMSQRYFTHASPTLFNAGTPRPQLSSCFLVTMKDDSIEGIYDTLKMCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AG + ++HNIRATGSYI GTNGTSNGIVPM+RV+N+TARYVDQGG KR GAFA Y
Sbjct: 241 ISKTAGVLVFNIHNIRATGSYIAGTNGTSNGIVPMIRVYNNTARYVDQGGNKRPGAFAAY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+ +FL+LRK HG E+ RAR +FYALW+PDLFM+RV+ N W+ FCPNEAPGLA
Sbjct: 301 LEPWHADVMDFLELRKTHGNEDFRARQMFYALWIPDLFMQRVERNEQWTFFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG EF LY KYEKE + ++ + AQ +W+ IL+SQ+ETG P+ML+KD+CN+KSNQ+N+
Sbjct: 361 DVWGDEFVALYEKYEKENRGRRSLPAQKVWYAILQSQVETGNPFMLYKDSCNRKSNQKNV 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++Y+SP E AVCNLAS+ALP ++ K+ +
Sbjct: 421 GTIRSSNLCTEIVEYSSPDEVAVCNLASVALPTFI--------------------KDGKY 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+F+KL +V +VT NLNKIIDVNYYPV ARRSN+RHRP+G+GVQGLAD F L +PF+S
Sbjct: 461 NFQKLHDVVKVVTRNLNKIIDVNYYPVPEARRSNMRHRPVGLGVQGLADAFFALRLPFES 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
A++LN IFETIY+ AL S EIA EG YE+Y GSP +GILQ DMW VNP+D WDW
Sbjct: 521 AGAKKLNIQIFETIYHAALEASCEIAQVEGTYESYEGSPCIQGILQYDMWNVNPTDLWDW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
++ I+K+G+RNSLLVAPMPTASTSQILG NECFEPYTSN+Y RRVLSGEF +VN L
Sbjct: 581 AEFKEKIAKHGIRNSLLVAPMPTASTSQILGFNECFEPYTSNMYQRRVLSGEFQIVNPWL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL E LW+ +KNK++ DGS+Q IP+IP++LK +YKTVWEI QKT++D A DRG +
Sbjct: 641 LKDLVERDLWNEDMKNKLVMLDGSIQAIPEIPQDLKDLYKTVWEISQKTVIDYAADRGPF 700
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK--- 777
ID SQSLNIH+ P++GK+TS+HF+ W +GLKTGMYYLR+ AA+ AIKFTVD L+
Sbjct: 701 IDQSQSLNIHLKDPSYGKITSMHFYGWKKGLKTGMYYLRTMAASAAIKFTVDPVALRARN 760
Query: 778 -----ENPK-VTDDDDAKMAQ--------------MVCSLTNREECMACGS 808
EN K V + A+++ + CS+ N E C C +
Sbjct: 761 EESNEENKKPVIKNGKAEISAEPTKEEIDIYNEKVLACSIKNPEACEMCSA 811
>gi|336171887|ref|YP_004579025.1| ribonucleoside-diphosphate reductase subunit alpha [Lacinutrix sp.
5H-3-7-4]
gi|334726459|gb|AEH00597.1| ribonucleoside-diphosphate reductase, alpha subunit [Lacinutrix sp.
5H-3-7-4]
Length = 827
Score = 1084 bits (2804), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/774 (64%), Positives = 625/774 (80%), Gaps = 24/774 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG++E + FDKITAR++KL YGL+ E DP+ V+ +V G+Y GVTTS+LD LA
Sbjct: 1 MFVLKRDGRKEPIMFDKITARVRKLCYGLN-ELVDPIKVAMRVIDGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA MTT HPDYA LAARI VSNLHKNTKK+FS+ + D+Y + N R+G KAPL++D+V
Sbjct: 60 AEQAATMTTAHPDYARLAARISVSNLHKNTKKTFSDVMTDLYQYVNPRTGKKAPLLSDEV 119
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y++IM+N +LDS IIY+RDF YDYFGFKTLERSYLLK+ G++ ERPQHMLMRV++GIH
Sbjct: 120 YNVIMENKEKLDSAIIYNRDFGYDYFGFKTLERSYLLKINGEIAERPQHMLMRVSIGIHI 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+D+D+A++TY +MS+++FTHA+PTLFN+GTP+ Q+SSCFL+ MKDDSI+GIYDTLK+ A
Sbjct: 180 NDLDAALETYELMSKKYFTHATPTLFNSGTPKPQMSSCFLLTMKDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HNIRATGSYI GTNGTSNGIVPML+VFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNIRATGSYIAGTNGTSNGIVPMLKVFNDTARYVDQGGGKRKGSFAMY 299
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWHADIF FLDL+KNHG EE RARDLFYA+W+PDLFM+RVQ + W+L CPNE PGL
Sbjct: 300 IEPWHADIFNFLDLKKNHGAEELRARDLFYAMWMPDLFMKRVQEDAQWTLMCPNECPGLC 359
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D EFE LYTKYE EGK +K ++A+ LW +IL+SQIETGTPYML+KD N+KSNQ+NL
Sbjct: 360 DVHSEEFEALYTKYEAEGKGRKSIKARELWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++YTS E AVCNLASIALP +V KN F
Sbjct: 420 GTIRSSNLCTEIMEYTSEDEVAVCNLASIALPMFV--------------------KNGEF 459
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D ++L +T VT+NLNK+ID NYYPV+ A SN RHRP+G+GVQGLAD FI L MPF S
Sbjct: 460 DHKELFRITKRVTKNLNKVIDRNYYPVKEAENSNFRHRPVGLGVQGLADAFIKLRMPFTS 519
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP---SDR 597
A+QLN+DIFET+YY A+ S E A +GPY+TY GSP+SKG Q ++W + S R
Sbjct: 520 DAAKQLNQDIFETLYYAAVTASMEEAQVDGPYQTYEGSPMSKGEFQHNLWNIQEDTLSGR 579
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR ++K+GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWEKLRKQVAKHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
KHLL DL ++GLW+ +KN+I+ +GS+Q + IP+++K +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLEDLVDLGLWNEDLKNEIMRANGSIQHVENIPQDIKDLYKTVWELSMKDIIDMSRQR 699
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTV 771
G +ID SQSLN+ M+ KLTS+HF+AW GLKTGMYYLR+++A DA K T+
Sbjct: 700 GYFIDQSQSLNLFMEGATMAKLTSMHFYAWKSGLKTGMYYLRTKSAVDAKKVTI 753
>gi|268573646|ref|XP_002641800.1| C. briggsae CBR-RNR-1 protein [Caenorhabditis briggsae]
Length = 790
Score = 1084 bits (2803), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 502/777 (64%), Positives = 626/777 (80%), Gaps = 19/777 (2%)
Query: 2 YVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAA 61
YVVKRDG+ E VHFDKIT+R++KLSYGL+++ DPV V+ KV +G+YKGVTT +LD LAA
Sbjct: 8 YVVKRDGRMENVHFDKITSRIQKLSYGLNMDFVDPVAVAIKVISGLYKGVTTVELDNLAA 67
Query: 62 ETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVY 121
ETAA+MTT HP+YA LAARI VSNLHK T K FSE +K ++ ++ +G AP+I+D+ +
Sbjct: 68 ETAASMTTQHPEYALLAARIAVSNLHKKTNKVFSEVMKTLHEFHHPHTGKHAPMISDETW 127
Query: 122 DIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKD 181
+II KNA +L+S I+YDRD+ Y YFGFKTLERSYLLK+ +VVERPQ MLMRVA+GIH
Sbjct: 128 EIIQKNADKLNSAIVYDRDYSYTYFGFKTLERSYLLKINKEVVERPQQMLMRVAIGIHGK 187
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAII 241
DI +AI+TY++MS+R+ THASPTLFN+GT R Q+SSCFL+ M +DSI GIYDTLK+CA+I
Sbjct: 188 DISAAIETYNLMSERYMTHASPTLFNSGTCRPQMSSCFLLTMSEDSILGIYDTLKQCALI 247
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SKSAGGIG++VH IRATGS I GTNGTSNG++PMLRV+N+TARYVDQGG KR GAFA+YL
Sbjct: 248 SKSAGGIGLNVHKIRATGSVIAGTNGTSNGLIPMLRVYNNTARYVDQGGNKRPGAFAIYL 307
Query: 302 EPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLAD 361
EPWHADIFEF+ LRKN G EE RARDLF ALWVPDLFM+RV+ + WSL CP E PGL D
Sbjct: 308 EPWHADIFEFVALRKNTGPEEERARDLFLALWVPDLFMKRVEKDQDWSLMCPCECPGLDD 367
Query: 362 CWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG 421
CWG EFE LY KYE EG+ +K V+A+ LW I+ +QIETG PY+ +KD N+KSNQQNLG
Sbjct: 368 CWGEEFETLYAKYEAEGRVRKTVKARKLWEHIVSNQIETGLPYITYKDAANRKSNQQNLG 427
Query: 422 TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFD 481
TIK SNLCTE+I+Y++P E AVCNLASIAL R+V + ++ FD
Sbjct: 428 TIKCSNLCTEIIEYSAPDEVAVCNLASIALNRFV-------------------TNDKKFD 468
Query: 482 FEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDST 541
F KLAEVT ++T+NLNKIIDVNYYP+E AR SN+RHRPIG+GVQGLAD F+L+ PF S
Sbjct: 469 FVKLAEVTKVITKNLNKIIDVNYYPIEEARNSNMRHRPIGLGVQGLADCFMLMRYPFTSP 528
Query: 542 EAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWG 601
+A+ LNK IFETIYY AL S E+A R+GPY TY GSPVSKG LQ DMWGV P+++ +W
Sbjct: 529 QARDLNKRIFETIYYAALEASCELAERDGPYSTYEGSPVSKGQLQFDMWGVTPTNQCNWD 588
Query: 602 GLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
LR I+K+GVRNSLL+APMPTAST+QILGNNE EPYTSNIYSRRVLSG+F +VN H+L
Sbjct: 589 ELRKKIAKHGVRNSLLMAPMPTASTAQILGNNESIEPYTSNIYSRRVLSGDFQIVNPHML 648
Query: 662 HDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYI 721
DL E GLW+ +KN++I ++GS+Q IP IP+++K +Y TVWEI QK +++MA DRG +I
Sbjct: 649 KDLVERGLWTDEMKNRLIANNGSIQNIPGIPDDIKELYLTVWEISQKEIIEMAADRGAFI 708
Query: 722 DHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE 778
D SQSLNIHM +P++ +TS+HF+ W +GLKTGMYYLR++ A +A++FTVD + L++
Sbjct: 709 DQSQSLNIHMAKPSYAAITSMHFYGWKKGLKTGMYYLRTKPAVNAVQFTVDKAALQQ 765
>gi|157126851|ref|XP_001660977.1| ribonucleoside-diphosphate reductase large chain [Aedes aegypti]
gi|18087345|gb|AAL58843.1|AF411296_1 ribonucleotide reductase 1 [Aedes aegypti]
gi|108873131|gb|EAT37356.1| AAEL010644-PA [Aedes aegypti]
Length = 844
Score = 1083 bits (2801), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 514/856 (60%), Positives = 649/856 (75%), Gaps = 67/856 (7%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG++E VH DKIT+R++KL YGL+++ DPV ++ KV G+Y GVTT +LD LA
Sbjct: 8 MYVFKRDGRKEEVHLDKITSRIQKLCYGLNMDFVDPVAITLKVINGLYSGVTTQELDNLA 67
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT H DYA LAAR+ VSNLHK TKK FS+ + D+Y NE + P+I++
Sbjct: 68 AETAATMTTEHADYAILAARLAVSNLHKETKKHFSDVMHDLYMMENEHLKKRTPMISEFH 127
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y +IM +A RL+S IIYDRDF Y+YFGFKTLERSYLLK++GK+VERPQHMLMRVA+GIH
Sbjct: 128 YKVIMDHADRLNSAIIYDRDFGYNYFGFKTLERSYLLKIKGKIVERPQHMLMRVAIGIHG 187
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+AI+TY+++S+R+FTHASPT+F A T R QLSSCFL+ M DDSIEGIYDTLK+CA+
Sbjct: 188 EDIDAAIETYNLLSERYFTHASPTMFAAATCRPQLSSCFLLTMSDDSIEGIYDTLKQCAL 247
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++VH IRA G+YI GTNG SNG++PMLRV+N+TA+YVDQGG KR GAFA+Y
Sbjct: 248 ISKSAGGIGLNVHCIRAKGTYIAGTNGISNGLIPMLRVYNNTAKYVDQGGNKRPGAFAIY 307
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH D+FEFLDL+KN G E+ RARD+FYALW+PDLFM+RV++N W L CP+E PGL+
Sbjct: 308 LEPWHGDVFEFLDLKKNTGAEDVRARDMFYALWIPDLFMKRVEANEDWCLMCPHECPGLS 367
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG EFE+LYT YE EG+ + V+AQ+LWF I++SQ+ETG PYML+KD CN+KSNQQN+
Sbjct: 368 DTWGEEFEKLYTSYEAEGRYIRKVKAQDLWFAIIESQVETGVPYMLYKDACNRKSNQQNI 427
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++Y+S E AVCNLASIAL +V+ P K +
Sbjct: 428 GTIKCSNLCTEIVEYSSKDEIAVCNLASIALNMFVK---------PDKT----------Y 468
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EV I T+NLNKIID+N+YPV A+RSN+RHRPIGIGVQG+AD FIL+ P+DS
Sbjct: 469 DFQKLKEVAKIATKNLNKIIDINFYPVPEAKRSNMRHRPIGIGVQGMADAFILMRYPYDS 528
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ+LN+ IFETIYY AL S E+A +EG YETY G PVSKG+LQ DMW P+D WDW
Sbjct: 529 EEAQKLNQQIFETIYYGALEASCELAEKEGTYETYPGCPVSKGVLQYDMWNKEPTDMWDW 588
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K+GVRNSLL+APMPTAST+QILGNNE FEPYTSN+Y+RRVLSGEF +VN HL
Sbjct: 589 AALKEKIAKHGVRNSLLLAPMPTASTAQILGNNESFEPYTSNVYNRRVLSGEFQIVNHHL 648
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE+ LW +KN+II ++GS+Q I +IP+ ++ +YKTVWEI K+ + MA DRG +
Sbjct: 649 LKDLTELDLWDDDMKNRIIANNGSIQNIEEIPQHIRDLYKTVWEISVKSCIKMAADRGAF 708
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQS NIH+ +PN+GKLTS+HF+ W GLKTGMYYLR++ A +AI+FTVD + L ++
Sbjct: 709 IDQSQSFNIHVAEPNYGKLTSIHFYGWKMGLKTGMYYLRTKPAVNAIQFTVDKTRLNQSN 768
Query: 781 KVTDDD------------------------------------------------DAKMAQ 792
++ + D + +MA+
Sbjct: 769 RINNSDTVNGSPSKMNGATSTPSKMNGTATSSASPVKASSDNSQQQLNGSHAERNRRMAE 828
Query: 793 MVCSLTNREECMACGS 808
MVCSL N+E+CM CGS
Sbjct: 829 MVCSLENKEDCMMCGS 844
>gi|354546793|emb|CCE43525.1| hypothetical protein CPAR2_211690 [Candida parapsilosis]
Length = 866
Score = 1083 bits (2800), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/775 (64%), Positives = 630/775 (81%), Gaps = 16/775 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG++E V FDKITAR+++L YGL H +PV ++QKV GVY+GVTT +LD LA
Sbjct: 1 MYVFKRDGRKEPVRFDKITARVQRLCYGLDSNHVEPVAITQKVIAGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA LAARI VSNLHK T K +S+ KD+Y + N + L AP+I+ +
Sbjct: 61 AETAATMTTIHPDYAVLAARIAVSNLHKQTIKLYSQVSKDLYEYINPETNLHAPMISKET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YDII +NA L+S I+YDRDF+Y+YFGFKTLERSYLL++ GKV ERPQH++MRVA+GIH
Sbjct: 121 YDIIQENADELNSAIVYDRDFNYNYFGFKTLERSYLLRINGKVAERPQHLIMRVAIGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI I+TY++MSQR+FTH SP LFNAGTP+ Q+SSCFLV MK+DSIEGIYDTLK CA+
Sbjct: 181 RDIPRVIETYNLMSQRYFTHGSPCLFNAGTPKPQMSSCFLVAMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+ +HNIR+TG+YI GTNGTSNGI+PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLHIHNIRSTGAYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+F+++RKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF PNEAP LA
Sbjct: 301 LEPWHADIFDFIEIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNGDWTLFSPNEAPNLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EF LY KYEKEG+ +K ++AQ LW+ IL++Q ETGTP+ML+KD CN KSNQ+NL
Sbjct: 361 DTYGDEFVELYEKYEKEGRGRKTIKAQKLWYSILEAQTETGTPFMLYKDACNTKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G IKSSNLC E+++Y++P E AVCNLASIALP ++ + G K+ ++
Sbjct: 421 GVIKSSNLCCEIVEYSAPDEVAVCNLASIALPSFIEQDG----------------KHAWY 464
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+F+KL +VT +VT NLN++ID NYYPV A RSN+RHRPI +GVQGLAD F++L + FDS
Sbjct: 465 NFDKLHDVTKVVTRNLNRVIDRNYYPVPEAERSNMRHRPIALGVQGLADAFMVLRIGFDS 524
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LN IFETIY+ A+ S E+AA EGPYETY GSP S+G+LQ D+W P++ WDW
Sbjct: 525 QEARELNIQIFETIYHAAVEASIELAAEEGPYETYQGSPASQGLLQYDLWNRKPTELWDW 584
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ ++K+G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL+GEF +VN +L
Sbjct: 585 DELKEKLAKHGMRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQIVNPYL 644
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W+ +K+ II ++GS+Q +P IP+E+KA+YKTVWEI QK ++DMA DR +
Sbjct: 645 LKDLVDLGIWNDAMKSSIISNNGSIQALPNIPDEIKALYKTVWEISQKHIIDMASDRAAF 704
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
ID SQSLNIH+ P GKLTS+HF+ W +GLKTGMYYLR++AA+ AI+FT+D ++
Sbjct: 705 IDQSQSLNIHIKDPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDKAI 759
>gi|367005841|ref|XP_003687652.1| hypothetical protein TPHA_0K00840 [Tetrapisispora phaffii CBS 4417]
gi|357525957|emb|CCE65218.1| hypothetical protein TPHA_0K00840 [Tetrapisispora phaffii CBS 4417]
Length = 877
Score = 1082 bits (2799), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/778 (63%), Positives = 623/778 (80%), Gaps = 14/778 (1%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+VVKRDG +E V FDKITAR+ +L YGL +H DPV V+Q++ +GVY+GVTT +LD LA
Sbjct: 1 MFVVKRDGHKEPVRFDKITARISRLCYGLDSDHVDPVKVTQRIISGVYEGVTTEELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA LAAR+ VSNLHK T K FS+ + Y++ N +G A L++ D+
Sbjct: 61 AETAAYMTTIHPDYAVLAARLAVSNLHKQTTKLFSDVVDQFYHYINPDTGKPASLVSKDL 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+D +M + ++S I YDRDF ++YFGFKTLERSYLL++ GKV ERPQHM+MRV++GIH
Sbjct: 121 FDNVMAHKDEINSAIFYDRDFQFNYFGFKTLERSYLLRMFGKVAERPQHMIMRVSLGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI SAI++Y+ MSQR+FTHASPTLFNAGTP+ Q+SSCFLV MKDDSIEGIYDTLKECA+
Sbjct: 181 SDIKSAIESYNFMSQRYFTHASPTLFNAGTPKPQMSSCFLVAMKDDSIEGIYDTLKECAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG +HNIR+TGSYI GTNGTSNGI+PM+RVFN+TARYVDQGG KR GA A+Y
Sbjct: 241 ISKTAGGIGCHIHNIRSTGSYIAGTNGTSNGIIPMIRVFNNTARYVDQGGNKRPGAIAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIF+F+D+RKNHGKEE RARDLF ALWVPDLFM+RV+ NG W+LF P++APGL+
Sbjct: 301 LEPWHDDIFDFVDIRKNHGKEEIRARDLFPALWVPDLFMKRVEENGDWTLFSPSDAPGLS 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D G EFE LY KY EG+ ++ ++AQ LW+ IL++Q ETGTP++++KD CN+KSNQ+NL
Sbjct: 361 DVCGAEFEALYNKYVAEGRGRRTIKAQKLWYSILEAQTETGTPFIVYKDACNEKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLC E+++Y++P ETAVCNLAS+ALP ++ S K + +
Sbjct: 421 GTIKSSNLCCEIVEYSAPDETAVCNLASVALPAFIET--------------SEDGKTQIY 466
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+FEKL E+ ++T NLN++ID NYYPVE AR SN RHRPI +GVQGLADTF LL +PF+S
Sbjct: 467 NFEKLHEIAKVMTRNLNRVIDRNYYPVEEARNSNFRHRPIALGVQGLADTFQLLRIPFES 526
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
+A++LN IFET+Y+ +L S E+A +EGPY+TY GSPVS+GILQ DMWGVNP+D WDW
Sbjct: 527 QKAKELNIHIFETLYHGSLEASCELAQKEGPYQTYEGSPVSQGILQYDMWGVNPTDLWDW 586
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I ++GVRNSLL+APMPTASTSQILG NECFEP+TSN+Y RR LSGEF +VN +L
Sbjct: 587 TSLKAQIKEHGVRNSLLLAPMPTASTSQILGYNECFEPFTSNMYQRRTLSGEFQIVNPYL 646
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++GLW+ +K +I +GS+ +P +P+ELK IYKTVWEI QKT+++ A DR +
Sbjct: 647 LRDLVDLGLWNDSMKQHLITANGSIADLPNVPQELKDIYKTVWEISQKTIIEFAADRSAF 706
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE 778
ID S SLNIH+ P FGKLTS+HF+ W +GLKTGMYYLR++AA+ AI+FT+D V ++
Sbjct: 707 IDQSHSLNIHIRAPTFGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDAKVAEQ 764
>gi|194388656|dbj|BAG60296.1| unnamed protein product [Homo sapiens]
Length = 762
Score = 1082 bits (2799), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 519/781 (66%), Positives = 627/781 (80%), Gaps = 22/781 (2%)
Query: 31 IEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNT 90
++ DP ++ KV G+Y GVTT +LD LAAETAA +TT HPDYA LAARI VSNLHK T
Sbjct: 1 MDFVDPAQITMKVIQGLYSGVTTVELDTLAAETAATLTTKHPDYAILAARIAVSNLHKET 60
Query: 91 KKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKT 150
KK FS+ ++D+YN+ N +G +P++A DI++ N RL+S IIYDRDF Y+YFGFKT
Sbjct: 61 KKVFSDVMEDLYNYINPHNGKHSPMVAKSTLDIVLANKDRLNSAIIYDRDFSYNYFGFKT 120
Query: 151 LERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGT 210
LERSYLLK+ GKV ERPQHMLMRV+VGIHK+DID+AI+TY+++S+RWFTHASPTLFNAGT
Sbjct: 121 LERSYLLKINGKVAERPQHMLMRVSVGIHKEDIDAAIETYNLLSERWFTHASPTLFNAGT 180
Query: 211 PRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSN 270
R QLSSCFL+ MKDDSIEGIYDTLK+CA+ISKSAGGIGV+V IRATGSYI GTNG SN
Sbjct: 181 NRPQLSSCFLLSMKDDSIEGIYDTLKQCALISKSAGGIGVAVSCIRATGSYIAGTNGNSN 240
Query: 271 GIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFY 330
G+VPMLRV+N+TARYVDQGG KR GAFA+YLEPWH DIFEFLDL+KN GKEE RARDLF+
Sbjct: 241 GLVPMLRVYNNTARYVDQGGNKRPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFF 300
Query: 331 ALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLW 390
ALW+PDLFM+RV++N WSL CPNE PGL + WG EFE+LY YEK+G+ +KVV+AQ LW
Sbjct: 301 ALWIPDLFMKRVETNQDWSLMCPNECPGLDEVWGEEFEKLYASYEKQGRVRKVVKAQQLW 360
Query: 391 FEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIA 450
+ I++SQ ETGTPYML+KD+CN+KSNQQNLGTIK SNLCTE+++YTS E AVCNLAS+A
Sbjct: 361 YAIIESQTETGTPYMLYKDSCNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASLA 420
Query: 451 LPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETA 510
L YV + +DF+KLAEVT +V NLNKIID+NYYPV A
Sbjct: 421 LNMYV-------------------TSEHTYDFKKLAEVTKVVVRNLNKIIDINYYPVPEA 461
Query: 511 RRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREG 570
SN RHRPIGIGVQGLAD FIL+ PF+S EAQ LNK IFETIYY AL S ++A +G
Sbjct: 462 CLSNKRHRPIGIGVQGLADAFILMRYPFESAEAQLLNKQIFETIYYGALEASCDLAKEQG 521
Query: 571 PYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQIL 630
PYETY GSPVSKGILQ DMW V P+D WDW L++ I+K G+RNSLL+APMPTAST+QIL
Sbjct: 522 PYETYEGSPVSKGILQYDMWNVTPTDLWDWKVLKEKIAKYGIRNSLLIAPMPTASTAQIL 581
Query: 631 GNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQ 690
GNNE EPYTSNIY+RRVLSGEF +VN HLL DLTE GLW +KN+II +GS+Q IP+
Sbjct: 582 GNNESIEPYTSNIYTRRVLSGEFQIVNPHLLKDLTERGLWHEEMKNQIIACNGSIQSIPE 641
Query: 691 IPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRG 750
IP++LK +YKTVWEI QKT++ MA +RG +ID SQSLNIH+ +PN+GKLTS+HF+ W +G
Sbjct: 642 IPDDLKQLYKTVWEISQKTVLKMAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQG 701
Query: 751 LKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDA---KMAQMVCSLTNREECMACG 807
LKTGMYYLR+R AA+ I+FT++ LK+ KV+ +++ A MVCSL NR+EC+ CG
Sbjct: 702 LKTGMYYLRTRPAANPIQFTLNKEKLKDKEKVSKEEEEKERNTAAMVCSLENRDECLMCG 761
Query: 808 S 808
S
Sbjct: 762 S 762
>gi|126662514|ref|ZP_01733513.1| ribonucleoside diphosphate reductase, alpha subunit [Flavobacteria
bacterium BAL38]
gi|126625893|gb|EAZ96582.1| ribonucleoside diphosphate reductase, alpha subunit [Flavobacteria
bacterium BAL38]
Length = 810
Score = 1082 bits (2799), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/832 (61%), Positives = 643/832 (77%), Gaps = 46/832 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDG +E V FDKIT R+KKL YGL+ + D V V+ +V G+Y GVTTS+LD LA
Sbjct: 1 MYVVKRDGHKEPVMFDKITDRIKKLCYGLN-DMVDAVKVAMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA+MT +HPDYA LAARI +SNLHKNT KSFSET+ +MY++ N R+ +APLI+D+V
Sbjct: 60 AETAASMTVSHPDYAQLAARIAISNLHKNTNKSFSETMNEMYHYVNPRTNQEAPLISDEV 119
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y++I NA LDS IIY RDF+YDYFGFKTLERSYLL++ GK+VERPQHMLMRV+VGIH
Sbjct: 120 YEVIKANAEFLDSHIIYTRDFNYDYFGFKTLERSYLLRINGKIVERPQHMLMRVSVGIHM 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+D+++ I+TY +MS+++FTHA+PTLFNAGTP+ Q+SSCFL+ MKDDSI+GIYDTLK+ A
Sbjct: 180 NDLEAVIETYDLMSKKFFTHATPTLFNAGTPKPQMSSCFLLTMKDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+++HN+RATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLAIHNVRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LE WHADIFEFLDL+KN GKEE RARDLF+A+W DLFM+RV+ + W+L CPNE P L
Sbjct: 300 LETWHADIFEFLDLKKNTGKEEMRARDLFFAMWTSDLFMKRVEEDANWTLMCPNECPDLD 359
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ +G EFE LYT YE +GK +K ++A+ LW +IL+SQIETGTPYML+KD N+KSNQ+NL
Sbjct: 360 NVYGDEFEALYTSYEAKGKGRKTIRARELWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++YTSP E AVCNLASI+LP +V +N F
Sbjct: 420 GTIRSSNLCTEIMEYTSPDEIAVCNLASISLPMFV--------------------ENGKF 459
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+ E L VT VT NLNK+ID NYYPV+ A SN+RHRP+G+GVQGLAD FI++ +PF S
Sbjct: 460 NHELLFTVTKRVTRNLNKVIDRNYYPVKEAENSNMRHRPVGLGVQGLADAFIMMRLPFTS 519
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP---SDR 597
EA+++N++IFET+Y+ A+ S E+A EGPY T+ GSP+SKG Q ++W + S R
Sbjct: 520 DEAKKVNQEIFETLYFAAVTASMEMAKEEGPYSTFEGSPISKGEFQHNLWNIKDEELSGR 579
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + NGVRNSLLVAPMPTASTSQILGNNE FEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWASLRKEVMANGVRNSLLVAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
KHLLHDL + GLW+ +K +I+ +GSVQ I +IP +LK +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLHDLVDRGLWNETLKQEIMRHNGSVQHIDRIPADLKELYKTVWEMSMKDIIDMSRQR 699
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDT---- 773
G +ID SQSLN+ M N+ KLTS+HF+AW GLKTGMYYLR++AA DAIKFT++
Sbjct: 700 GYFIDQSQSLNLFMQDANYAKLTSMHFYAWKSGLKTGMYYLRTKAAVDAIKFTLNNDKVA 759
Query: 774 -----------------SVLKENPKVTDDDDAKMAQMVCSLTNREECMACGS 808
+VL+E ++T ++ M +M + E+C CGS
Sbjct: 760 APIEVKPQTEVKKVEAIAVLEEPSEMTAEEYRAMVEMARN-AGPEDCEMCGS 810
>gi|50557402|ref|XP_506109.1| YALI0F31735p [Yarrowia lipolytica]
gi|49651979|emb|CAG78922.1| YALI0F31735p [Yarrowia lipolytica CLIB122]
Length = 892
Score = 1082 bits (2798), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/777 (63%), Positives = 619/777 (79%), Gaps = 16/777 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
++V+KRDG++E+V DKITAR+K+L YGL +H DP+ ++ K+ +G+Y+GV+T +LD LA
Sbjct: 4 LFVIKRDGRKESVQVDKITARIKRLCYGLDPDHVDPIQITLKIASGIYEGVSTIELDNLA 63
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA LAARI VSNLHK TKK FS+ + D+Y++ N R+ +P+++ ++
Sbjct: 64 AETAAYMTTLHPDYAILAARIAVSNLHKQTKKQFSQVVYDLYHYVNPRNKKHSPMVSKEL 123
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YD + NA L+ I+YDRDF Y+YFGFKTLER+YLL+V G V ERPQ M+MRV+VGIH
Sbjct: 124 YDTVQANADELNGAILYDRDFTYNYFGFKTLERAYLLRVNGAVAERPQQMIMRVSVGIHG 183
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D+I AI+TY+ MSQ++FTHASPTL+NAGTP+ Q+SSCFLV MKDDSI+GIYDTLK CA+
Sbjct: 184 DNIARAIETYNYMSQKYFTHASPTLYNAGTPQPQMSSCFLVNMKDDSIDGIYDTLKTCAL 243
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+S+HNIRATGSYI GTNGTSNGIVPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 244 ISKSAGGIGLSIHNIRATGSYIAGTNGTSNGIVPMLRVYNNTARYVDQGGNKRPGAFAMY 303
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIFEF +LRKNHGKEE RARDLF ALW+PDLFMERV+ N W+L CPNE PGL
Sbjct: 304 LEPWHDDIFEFCELRKNHGKEEIRARDLFLALWIPDLFMERVEQNAEWTLMCPNECPGLD 363
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EF++LY +YEKEG+ ++ + AQ LW+ IL Q E+G P+ML+KD+CN+KSNQ+NL
Sbjct: 364 DVYGDEFKQLYEQYEKEGRGRRTIPAQKLWYHILDCQTESGNPFMLYKDSCNRKSNQKNL 423
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLC E+++Y+SP E AVCNLASIALP +V +R N ++
Sbjct: 424 GTIKSSNLCCEIVEYSSPDEVAVCNLASIALPTFV----------------TRDDTNSFY 467
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL ++ ++ NLN IID NYYPV A++SN+RHRPI +GVQGLADTF+ L +PF+S
Sbjct: 468 DFKKLHDIAKVIVRNLNAIIDRNYYPVPEAKKSNMRHRPIALGVQGLADTFMALRLPFES 527
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LN IFETIY+ A+ S E+A +G YET+ GSP SKG LQ D+W V PS+ W+W
Sbjct: 528 EEAKKLNIQIFETIYHGAVEASYEMALEDGAYETFQGSPASKGDLQFDLWNVTPSELWEW 587
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I K G+RNSLLVAPMPTASTSQILG NECFEPYTSNIYSRRVL+GEF +VN L
Sbjct: 588 DDLKAKIMKTGMRNSLLVAPMPTASTSQILGFNECFEPYTSNIYSRRVLAGEFQIVNPWL 647
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL E+GLW+ +KN+I+ D+GSVQ IP IP+E+K +YKTVWEI QK +++MA DR +
Sbjct: 648 LKDLVEVGLWNETMKNRIVADNGSVQNIPNIPQEIKDLYKTVWEISQKRIIEMAADRSPF 707
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
ID SQSLNIH+ P GKLTS+HF+ W +GLKTGMYYLR+ AAA I+FT+D LK
Sbjct: 708 IDQSQSLNIHIKDPTMGKLTSMHFYGWKKGLKTGMYYLRTMAAAAPIQFTIDQEALK 764
>gi|260061081|ref|YP_003194161.1| ribonucleoside-diphosphate reductase large chain [Robiginitalea
biformata HTCC2501]
gi|88785213|gb|EAR16382.1| probable ribonucleoside-diphosphate reductase large chain
[Robiginitalea biformata HTCC2501]
Length = 812
Score = 1081 bits (2796), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/763 (65%), Positives = 620/763 (81%), Gaps = 24/763 (3%)
Query: 15 FDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDY 74
FDKITAR++KL YGLS + DPV V+ +V G+Y GVTTS+LD LAAE AA +TT HPDY
Sbjct: 2 FDKITARVRKLCYGLS-DLVDPVKVAMRVIEGLYDGVTTSELDNLAAEIAATLTTTHPDY 60
Query: 75 ASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSE 134
A LAARI VSNLHKNTKKSFSET+KD+Y + N R+G KAPL+ADDV+++I K+A LDS
Sbjct: 61 AKLAARISVSNLHKNTKKSFSETMKDLYEYVNPRTGKKAPLVADDVFEVIQKHADTLDSM 120
Query: 135 IIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMS 194
IIY+RDF YDYFGFKTLERSYLLK+ GK+VERPQHMLMRV+VGIH DD+D+ +TY +MS
Sbjct: 121 IIYNRDFGYDYFGFKTLERSYLLKLNGKIVERPQHMLMRVSVGIHLDDLDAVRETYELMS 180
Query: 195 QRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHN 254
+++FTHA+PTLFN+GTP+ Q+SSCFL+ M+DDSI+GIY+TLK+ A IS+SAGGIG+S+HN
Sbjct: 181 KKYFTHATPTLFNSGTPKPQMSSCFLLAMQDDSIDGIYNTLKQTAKISQSAGGIGLSIHN 240
Query: 255 IRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDL 314
IRATGSYI GTNGTSNG+VPMLRVFNDTARYVDQGGGKRKG+FA+YLEPWHADIF+FL+L
Sbjct: 241 IRATGSYIAGTNGTSNGLVPMLRVFNDTARYVDQGGGKRKGSFAIYLEPWHADIFDFLEL 300
Query: 315 RKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKY 374
+KNHGKEE RARDLFYA+W+ DLFM+RV+++ W+L CPNE PGL EFE LY KY
Sbjct: 301 KKNHGKEEMRARDLFYAMWISDLFMKRVEADAEWTLMCPNECPGLYTTHSEEFEELYLKY 360
Query: 375 EKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQ 434
EKEGK +K ++A+ LW +IL+SQIETGTPYML+KD N+KSNQ+NLGTI+SSNLCTE+++
Sbjct: 361 EKEGKGRKTIKARELWEKILESQIETGTPYMLYKDAANRKSNQKNLGTIRSSNLCTEILE 420
Query: 435 YTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTE 494
YT+ E AVCNLASIALP ++ KN FD ++L VT VT+
Sbjct: 421 YTAEDEVAVCNLASIALPMFI--------------------KNGEFDHKELFRVTKRVTK 460
Query: 495 NLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETI 554
NLN++ID NYYP++ A SN+RHRPIG+GVQGLADTFILL +PF S EA++LN++IFET+
Sbjct: 461 NLNRVIDRNYYPIKEAENSNMRHRPIGLGVQGLADTFILLRLPFTSDEAKKLNREIFETL 520
Query: 555 YYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP---SDRWDWGGLRDMISKNG 611
YY A S E+A EGPY +Y GSP+S+G Q ++WG+ S RWDW LR I KNG
Sbjct: 521 YYAAATASMEMAKEEGPYSSYEGSPISQGQFQHNLWGIEDKELSGRWDWEKLRKSIKKNG 580
Query: 612 VRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWS 671
VRNSLLVAPMPTASTSQILGNNECFEPYTSNIY+RRVLSGEF+VVNKHLL DL +GLW+
Sbjct: 581 VRNSLLVAPMPTASTSQILGNNECFEPYTSNIYTRRVLSGEFIVVNKHLLEDLVSLGLWN 640
Query: 672 PIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHM 731
+K +++ +GS+Q I IP+ +K +Y+TVWE+ K ++DM+ RG +ID SQSLN+ M
Sbjct: 641 ENMKQELMRANGSIQHIDAIPDNIKELYQTVWELSMKDIIDMSRQRGYFIDQSQSLNLFM 700
Query: 732 DQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTS 774
+ N+ KLTS+HF+AW GLKTGMYYLR++AA DAIKFT+D +
Sbjct: 701 ENANYAKLTSMHFYAWKSGLKTGMYYLRTKAAVDAIKFTLDNT 743
>gi|324506544|gb|ADY42792.1| Ribonucleoside-diphosphate reductase large subunit, partial
[Ascaris suum]
Length = 790
Score = 1081 bits (2796), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/807 (63%), Positives = 634/807 (78%), Gaps = 28/807 (3%)
Query: 2 YVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAA 61
YVVKRDG++E VHFDKI R++KL YGL+ ++ D + VSQKV G++KGV+T QLD LAA
Sbjct: 12 YVVKRDGRREGVHFDKIAHRIEKLCYGLNPDYVDYIEVSQKVIAGLFKGVSTVQLDNLAA 71
Query: 62 ETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVY 121
ETAA MTT HPDYA LAARI +SNLHK TKK FSE +YN ++ ++G+ P+I+ +V+
Sbjct: 72 ETAADMTTKHPDYAILAARIAISNLHKQTKKMFSEVATVLYNAHHPKTGVHTPMISKEVF 131
Query: 122 DIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKD 181
DII+ NA RL+S I++DRDF + YFGFKTLERSYLLK+ G+ VERPQH+ MRVAVGIHK+
Sbjct: 132 DIIIANADRLNSAIVHDRDFSFTYFGFKTLERSYLLKMNGEPVERPQHLFMRVAVGIHKE 191
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAII 241
DID+AI+TY++MS+RWFTHA+PTLFN+GT Q+SSCFL+ M++DSIEGI+DTLK+CA+I
Sbjct: 192 DIDAAIETYNLMSERWFTHATPTLFNSGTRLPQMSSCFLLTMQEDSIEGIFDTLKKCALI 251
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SKSAGGIG++VH IRATGS I GT+G SNG+VPMLRVFN+TARYVDQGG KR GAFA+YL
Sbjct: 252 SKSAGGIGLNVHCIRATGSSIAGTSGVSNGLVPMLRVFNNTARYVDQGGNKRPGAFAIYL 311
Query: 302 EPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLAD 361
EPWHADIFE+LDLRKN G E R RDLF+ LWVPDLFM+RV+ NG WSL CP E GL D
Sbjct: 312 EPWHADIFEYLDLRKNVGDELERCRDLFFGLWVPDLFMQRVRDNGKWSLMCPAECRGLED 371
Query: 362 CWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG 421
CWG EFE+LY+KYE EG+ +K ++A+ LW I+ +QIETG PYM++KD CN+KSNQQN+G
Sbjct: 372 CWGDEFEKLYSKYEAEGRYRKQIEARRLWEAIITAQIETGVPYMVYKDACNRKSNQQNVG 431
Query: 422 TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFD 481
TIK SNLCTE+++Y+SPTE AVCNLASIAL R+V + + FD
Sbjct: 432 TIKCSNLCTEIVEYSSPTEVAVCNLASIALNRFV-------------------TTEKTFD 472
Query: 482 FEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDST 541
F+KL EVT +VT NLNKIID NYYPV A+ SN+RHRPIGIGVQGLAD F+L+ PF S
Sbjct: 473 FKKLHEVTKVVTRNLNKIIDGNYYPVPEAKVSNMRHRPIGIGVQGLADAFMLMRYPFTSA 532
Query: 542 EAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWG 601
A++LNK IFETIY+ AL S E+A + GPYE+Y GSP+SKGILQ DMWGV P+D+ DW
Sbjct: 533 PARELNKRIFETIYHAALEASCELAKKYGPYESYEGSPISKGILQQDMWGVEPTDQCDWD 592
Query: 602 GLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
LR I+K GVRNSLL+APMPTAST+QILGNNE EPYTSN+Y+R VLSG F + N HLL
Sbjct: 593 TLRAEIAKYGVRNSLLLAPMPTASTAQILGNNESIEPYTSNVYTRNVLSGNFQIFNPHLL 652
Query: 662 HDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYI 721
DL ++GLW +K +II GSVQ I +IP E++ +YKTVWE+ QK ++DMA DRG +I
Sbjct: 653 KDLVDLGLWDDEMKLEIIAHKGSVQAIERIPLEIRNLYKTVWELSQKDIIDMAADRGAFI 712
Query: 722 DHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPK 781
D SQSLNI + +P++ TS+HF+ W +GLKTGMYYLR+R A DA++FTVD + LKE
Sbjct: 713 DQSQSLNIFIAKPSYANCTSMHFYGWSKGLKTGMYYLRTRPAVDAVQFTVDKTRLKEV-- 770
Query: 782 VTDDDDAKMAQMVCSLTNREECMACGS 808
+AKM + C+L++ E C+ C S
Sbjct: 771 -----NAKMLE--CALSDPEGCVMCSS 790
>gi|403418237|emb|CCM04937.1| predicted protein [Fibroporia radiculosa]
Length = 958
Score = 1080 bits (2794), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/741 (67%), Positives = 601/741 (81%), Gaps = 20/741 (2%)
Query: 39 VSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETI 98
++QKV GVY+GVTT +LD LAAETAA +TT HPDYA LAARI VSNLHK TKK+FS I
Sbjct: 117 ITQKVIAGVYQGVTTVELDNLAAETAAYLTTKHPDYAILAARIAVSNLHKETKKNFSAVI 176
Query: 99 KDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLK 158
D+YN+ N ++G A +I+ YD++M NA LDS IIYDRDF+Y++FGFKTLERSYLLK
Sbjct: 177 SDLYNYVNPKNGRPAGMISKQTYDVVMANAETLDSAIIYDRDFNYNFFGFKTLERSYLLK 236
Query: 159 VQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSC 218
+ G+ ERPQH+LMRVAVGIH DI ++TYH+MS+R+FTHASPTLFNAGTP AQLSSC
Sbjct: 237 LNGRTAERPQHLLMRVAVGIHGSDITRVLETYHLMSERFFTHASPTLFNAGTPNAQLSSC 296
Query: 219 FLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRV 278
FLVCMKDDSIEGIYDTLK CA+ISK+AGGIG+S+HNIRATGSYI GTNG SNGIVPMLR
Sbjct: 297 FLVCMKDDSIEGIYDTLKNCAMISKTAGGIGLSIHNIRATGSYIAGTNGYSNGIVPMLRA 356
Query: 279 FNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLF 338
++ TARYVDQGG KR GAFA+YLEPWH DIFEFLDLRKNHGKEE RARDLFYALW+PDLF
Sbjct: 357 YDATARYVDQGGNKRPGAFAIYLEPWHDDIFEFLDLRKNHGKEEVRARDLFYALWIPDLF 416
Query: 339 MERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQI 398
M+RV++NG WSLFCPNEAPGL + WG EFE LY +YE EG+A++ + AQ LW+ IL +QI
Sbjct: 417 MKRVEANGKWSLFCPNEAPGLHEVWGAEFETLYERYESEGRARRTIDAQKLWYAILDAQI 476
Query: 399 ETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREM 458
ETG P+ML+KD CN KSNQ++LGTIKSSNLCTE+++Y+SP ETAVCNLAS+AL
Sbjct: 477 ETGNPFMLYKDACNAKSNQRHLGTIKSSNLCTEIVEYSSPDETAVCNLASVAL------- 529
Query: 459 GVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHR 518
PS + G R ++F++L +V +VT NLN+II+VNYYPV ARRSN+RHR
Sbjct: 530 -------PSCIEGGR------YNFQRLHDVAKVVTFNLNRIIEVNYYPVPEARRSNMRHR 576
Query: 519 PIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGS 578
PIG+GV GLAD F+ L MPFDS EA++LNK IFETIY+ AL S EIAA +GPYETY GS
Sbjct: 577 PIGVGVNGLADAFMALRMPFDSPEARELNKQIFETIYHAALEASCEIAAVDGPYETYEGS 636
Query: 579 PVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
P S+G LQ DMWGV PSD WDW L+D I+K+G+RNSLLVAPMPTASTSQILG NECFEP
Sbjct: 637 PASRGELQYDMWGVTPSDLWDWASLKDKIAKHGLRNSLLVAPMPTASTSQILGYNECFEP 696
Query: 639 YTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAI 698
YTSNIY+RRVL+GEF +V LL +L + LW +KN+II ++GSVQ I IP+++KAI
Sbjct: 697 YTSNIYTRRVLAGEFQIVCPWLLRELVDRKLWDDEMKNQIIANNGSVQNISGIPDDIKAI 756
Query: 699 YKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYL 758
YKTVWEI QK ++DMA DRG +I SQSLN+H+ P +LTS+HF+ W +GLKTGMYYL
Sbjct: 757 YKTVWEISQKKVLDMAADRGAFICQSQSLNVHLQSPTTPQLTSMHFYGWKKGLKTGMYYL 816
Query: 759 RSRAAADAIKFTVDTSVLKEN 779
R+R AA AI+FTVD +LK++
Sbjct: 817 RTRPAAQAIQFTVDQGMLKKS 837
>gi|91080433|ref|XP_968671.1| PREDICTED: similar to AGAP010198-PA [Tribolium castaneum]
gi|270005754|gb|EFA02202.1| hypothetical protein TcasGA2_TC007859 [Tribolium castaneum]
Length = 808
Score = 1079 bits (2791), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/818 (62%), Positives = 639/818 (78%), Gaps = 29/818 (3%)
Query: 2 YVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAA 61
YV KRDG++E VH DKIT+R++KL YGL++E DPV ++ KV +G+Y GVTT +LD LAA
Sbjct: 9 YVCKRDGRKEEVHIDKITSRIQKLCYGLNMEFVDPVSITLKVISGLYPGVTTVELDTLAA 68
Query: 62 ETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVY 121
ETAA MTTNHPDYA LAARI VSNLHK TKK FS+ I D++ + ++G K +I+D+ +
Sbjct: 69 ETAAMMTTNHPDYAILAARIAVSNLHKETKKQFSDVIDDLHKAVSSKTGRKTQMISDEHH 128
Query: 122 DIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKD 181
I+MKNA RL+S IIYDRDF Y+YFGFKTLERSYLLK+ GK+VERPQHMLMRVAVGIH
Sbjct: 129 AIVMKNADRLNSCIIYDRDFSYNYFGFKTLERSYLLKINGKIVERPQHMLMRVAVGIHGS 188
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAII 241
DIDSAI+TY+ MS+++FTHASPTLF+A TP+ QLSSCFLV + +D++EGI L +CA+I
Sbjct: 189 DIDSAIETYNYMSEKYFTHASPTLFSAATPKPQLSSCFLVTLPEDNLEGISRCLTQCAMI 248
Query: 242 SKSAGGIGVSVHNIRATGSYIR----GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAF 297
SK+AGG+GVS+HN+RA G+ R GT S+GIVP+LRVFN++ARYVDQGG KR GA
Sbjct: 249 SKTAGGLGVSIHNLRAKGTTFRTTLAGTPKVSDGIVPVLRVFNNSARYVDQGGNKRPGAC 308
Query: 298 AVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAP 357
A+YLEPWHADI +FL+L+KN GKE+ RARDLF+ALW PDLFM RV+++ WSL CP+++P
Sbjct: 309 AIYLEPWHADILDFLNLKKNTGKEQLRARDLFFALWTPDLFMRRVKNDEKWSLMCPHQSP 368
Query: 358 GLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQ 417
GLADCWG EFE+LY KYE +G+ + + A+++W I SQ+ETGTPYML+KD CN+KSNQ
Sbjct: 369 GLADCWGEEFEKLYEKYETDGRYVRQLPARDVWRAICVSQVETGTPYMLYKDACNRKSNQ 428
Query: 418 QNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKN 477
QNLGTI+SSNLCTE++++TSP E AVCNLASIA+ +V+ +
Sbjct: 429 QNLGTIRSSNLCTEIVEFTSPDEIAVCNLASIAVNMFVK------------------ADR 470
Query: 478 RYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMP 537
+DF KL E+T +V +NLNK+ID+NYYP+ AR+SNLRHRP+GIGVQGLAD FILL MP
Sbjct: 471 SGYDFNKLKEITKVVAKNLNKVIDLNYYPLPEARKSNLRHRPVGIGVQGLADAFILLRMP 530
Query: 538 FDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDR 597
FDS EA+ LN+ IFET+YY AL S E+A + GPYETY GSPVS+G+LQ DMWGV P++
Sbjct: 531 FDSPEAKALNRQIFETLYYGALEASCELAEKYGPYETYEGSPVSQGVLQYDMWGVTPTNL 590
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW L+ I+K GVRNSLL+APMPTAST+QILGNNE EPYTSNIY RRVLSGEF VVN
Sbjct: 591 WDWSDLKKKIAKYGVRNSLLLAPMPTASTAQILGNNESTEPYTSNIYVRRVLSGEFQVVN 650
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
+HLL DLTE GLW +KN+II + GS+Q IP IP++LK +YKTVWEI QK ++DMA DR
Sbjct: 651 QHLLKDLTERGLWDDTMKNQIIANYGSIQNIPGIPDDLKQLYKTVWEISQKVIIDMAADR 710
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL- 776
G +ID SQS+NIH+ PN+G ++S+HF+ W +GLKTGMYYLR++ AA+ I+FTVD S L
Sbjct: 711 GAFIDQSQSMNIHIAAPNYGVMSSMHFYGWDKGLKTGMYYLRTKPAANPIQFTVDKSKLI 770
Query: 777 -KENPKVTDDDDAKM-----AQMVCSLTNREECMACGS 808
K + V + K A +VCSL N E C C +
Sbjct: 771 TKTSTGVGKVQETKTTPEEEAALVCSLRNPEACEMCSA 808
>gi|281204858|gb|EFA79053.1| ribonucleotide reductase large subunit [Polysphondylium pallidum
PN500]
Length = 868
Score = 1079 bits (2791), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/780 (65%), Positives = 621/780 (79%), Gaps = 18/780 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKL---SYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLD 57
MYV+KRDG + +V +DKIT RL+ L L+ E DP V+QKV +GV+ GV T++LD
Sbjct: 21 MYVIKRDGTKASVQYDKITQRLQSLCDLEPKLNGEVIDPSEVTQKVASGVFPGVKTTELD 80
Query: 58 ELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIA 117
LAAETAA M+T HPDY LAARI VSNLHK T SF ET++ ++ N ++G APL++
Sbjct: 81 NLAAETAAYMSTKHPDYGVLAARISVSNLHKQTSSSFLETVEKQHSFTNPKTGQPAPLVS 140
Query: 118 DDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVG 177
D++Y+++ + RL+ I Y RDF+YD+FGFKTLERSYL ++ ++ERPQ MLMRV++G
Sbjct: 141 DELYNLVKIHHKRLEEAIDYRRDFEYDFFGFKTLERSYLHRINDIIIERPQQMLMRVSIG 200
Query: 178 IHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKE 237
IH DDIDSAI+TY+++SQR FTHA+PTLFN+GTP Q+SSCFLV MK+DSI+GIYDTLK+
Sbjct: 201 IHGDDIDSAIETYNLLSQRLFTHATPTLFNSGTPSPQMSSCFLVQMKEDSIDGIYDTLKQ 260
Query: 238 CAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAF 297
CA+ISKSAGGIG++VH IRA SYIRGTNGTSNG+VPMLRVFNDTARYVDQGGGKRKGAF
Sbjct: 261 CALISKSAGGIGIAVHKIRAARSYIRGTNGTSNGLVPMLRVFNDTARYVDQGGGKRKGAF 320
Query: 298 AVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAP 357
AVYLEPWHADI EFLDLRKNHGKEE RARDLFYALWV DLFMERV+++ +W+LFCPNEAP
Sbjct: 321 AVYLEPWHADIVEFLDLRKNHGKEEMRARDLFYALWVSDLFMERVENDDVWNLFCPNEAP 380
Query: 358 GLADCWGTEFERLYTKYEK-EGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSN 416
GLADCWG EF LY KYE G +++ ++AQ+LWF I++SQIETGTPY L+KD CN KSN
Sbjct: 381 GLADCWGDEFRALYEKYENTPGLSRRTIKAQDLWFTIIESQIETGTPYFLYKDACNSKSN 440
Query: 417 QQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSK 476
QQNLGTI+ SNLCTE+IQYTS E AVCNLASIALP+YVRE ++ +
Sbjct: 441 QQNLGTIQCSNLCTEIIQYTSADEVAVCNLASIALPKYVRE--------------NKETG 486
Query: 477 NRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGM 536
FD + L EVT +T NLNKIID NYYPV AR SN RHRPIGIG+QGLAD FI L +
Sbjct: 487 KPEFDHQYLFEVTKTITRNLNKIIDRNYYPVLEARNSNFRHRPIGIGIQGLADVFIRLRL 546
Query: 537 PFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSD 596
PF+S A LNK+I ETIY+ AL S+E+A R+GPYE++ GSP SKG LQ D W V PS
Sbjct: 547 PFESNGAAILNKEIAETIYFAALTASAELAERDGPYESFKGSPASKGTLQQDFWNVTPSP 606
Query: 597 RWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVV 656
RWDW L+ I G+RNSLL+APMPTASTSQILGNNE FEPYTSNIYSRRVL+GEF VV
Sbjct: 607 RWDWTSLKQKIISTGLRNSLLIAPMPTASTSQILGNNEAFEPYTSNIYSRRVLAGEFTVV 666
Query: 657 NKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVD 716
NK LL DL ++ LW+P +KN+II GS+Q I IP++LK +YKTVWEI+Q+TL+DMA D
Sbjct: 667 NKQLLQDLMDLDLWTPEMKNQIIAHRGSIQNIEDIPDDLKELYKTVWEIRQRTLIDMAAD 726
Query: 717 RGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
RG +ID SQS N+ + +P F KLTS+HF+AW +GLKTGMYYLR+RAAADAI+FTVD ++L
Sbjct: 727 RGAFIDQSQSFNVFIAEPTFQKLTSMHFYAWKKGLKTGMYYLRTRAAADAIQFTVDQTML 786
>gi|448513340|ref|XP_003866926.1| Rnr1 large subunit of ribonucleotide reductase [Candida
orthopsilosis Co 90-125]
gi|380351264|emb|CCG21488.1| Rnr1 large subunit of ribonucleotide reductase [Candida
orthopsilosis Co 90-125]
Length = 866
Score = 1079 bits (2791), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/775 (64%), Positives = 629/775 (81%), Gaps = 16/775 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG++E V FDKITAR+++L YGL H +PV ++QKV GVY+GVTT +LD LA
Sbjct: 1 MYVFKRDGRKEPVRFDKITARVQRLCYGLDSNHVEPVAITQKVIAGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA LAARI VSNLHK T K +S+ KD+Y + N + L AP+I+ +
Sbjct: 61 AETAATMTTIHPDYAVLAARIAVSNLHKQTIKLYSQVSKDLYEYINPETNLHAPMISKET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YDII +NA L+S I+YDRDF+Y+YFGFKTLERSYLL++ GKV ERPQH++MRVA+GIH
Sbjct: 121 YDIIQENADELNSAIVYDRDFNYNYFGFKTLERSYLLRINGKVAERPQHLIMRVAIGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI I+TY++MSQR+FTH SP LFNAGTP+ Q+SSCFLV MK+DSIEGIYDTLK CA+
Sbjct: 181 RDIPRVIETYNLMSQRYFTHGSPCLFNAGTPKPQMSSCFLVAMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+ +HNIR+TG+YI GTNGTSNGI+PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLHIHNIRSTGAYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DIF+F+++RKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF PNEAPGLA
Sbjct: 301 LEPWHSDIFDFIEIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNGEWTLFSPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EF LY KYE+EG+ +K ++AQ LW+ IL++Q ETGTP+ML+KD CN KSNQ+NL
Sbjct: 361 DTYGDEFVELYEKYEREGRGRKTIKAQKLWYSILEAQTETGTPFMLYKDACNTKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G IKSSNLC E+++Y++P E AVCNLASIALP +V + G K+ ++
Sbjct: 421 GIIKSSNLCCEIVEYSAPDEVAVCNLASIALPSFVEQDG----------------KHAWY 464
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+F+KL +VT +VT NLN++ID NYYPV A +SN+RHRPI +GVQGLAD F++L + FDS
Sbjct: 465 NFDKLHDVTKVVTRNLNRVIDRNYYPVPEAEKSNMRHRPIALGVQGLADAFMVLRIGFDS 524
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LN IFETIY+ A+ S E+A EGPYETY GSP S+G+LQ D+W P++ WDW
Sbjct: 525 QEARELNIQIFETIYHAAVEASIELAQEEGPYETYQGSPASQGLLQYDLWDRKPTELWDW 584
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ ++K+G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL+GEF +VN +L
Sbjct: 585 DELKKKLAKHGMRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQIVNPYL 644
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W+ +K+ II ++GS+Q +P IP+E+KA+YKTVWEI QK ++DMA DR +
Sbjct: 645 LKDLVDLGIWNDAMKSSIISNNGSIQALPNIPDEIKALYKTVWEISQKHIIDMASDRAAF 704
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
ID SQSLNIH+ P GKLTS+HF+ W +GLKTGMYYLR++AA+ AI+FT+D ++
Sbjct: 705 IDQSQSLNIHIKDPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDKAI 759
>gi|401882642|gb|EJT46892.1| ribonucleoside-diphosphate reductase large chain [Trichosporon
asahii var. asahii CBS 2479]
gi|406700693|gb|EKD03858.1| ribonucleoside-diphosphate reductase large chain [Trichosporon
asahii var. asahii CBS 8904]
Length = 863
Score = 1079 bits (2790), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/778 (63%), Positives = 619/778 (79%), Gaps = 18/778 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M++ KRDG++E V FDK+TAR+ KLSYGL +P +++QKV G++ +TT +LD LA
Sbjct: 3 MWIYKRDGRKEPVAFDKVTARINKLSYGLDTNFVEPAIITQKVVQGIHPYITTVELDNLA 62
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAAA++ HPD+A LAARI +SNLHK TKK FS+ I+D+Y +N ++G AP+++++V
Sbjct: 63 AETAAALSPMHPDWAILAARIAISNLHKETKKQFSQVIEDLYQWHNPKTGKHAPMVSEEV 122
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+I+ KN LD+ IIYDRDF Y+YFGFKTLERSYLL++ GK+ ERPQHMLMRV+VGIH
Sbjct: 123 YNIVSKNKEALDAAIIYDRDFAYNYFGFKTLERSYLLRIDGKIAERPQHMLMRVSVGIHG 182
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDI+ I+TY++MS+R+FTHASPTLFN+GTP AQ+SSCFLV MK+DSI+GIYDTLK CA
Sbjct: 183 DDIEKVIETYNLMSERYFTHASPTLFNSGTPHAQMSSCFLVAMKEDSIDGIYDTLKTCAQ 242
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIRA GSYI GTNG SNGIVPMLR ++ TARYVDQGG KR GAFA+Y
Sbjct: 243 ISKTAGGIGLHIHNIRAKGSYIAGTNGYSNGIVPMLRAYDATARYVDQGGNKRPGAFAIY 302
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+FLDLRKNHGKEE RARDLFYALW+ DLFM+RV+S+G W+L CP E PGLA
Sbjct: 303 LEPWHADIFDFLDLRKNHGKEEVRARDLFYALWISDLFMKRVESDGDWTLMCPAECPGLA 362
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D EFE+LY YE+ GK +K ++AQ LWF IL++Q ETG P+ML+KD N+KSNQQ+L
Sbjct: 363 DVHSEEFEKLYESYERAGKGRKTIKAQKLWFAILEAQTETGGPFMLYKDAANRKSNQQHL 422
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I+Y+SP E AVCNLASIALP +V + + +
Sbjct: 423 GTIKSSNLCTEIIEYSSPDEVAVCNLASIALPAFV------------------NFETKTY 464
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL E+T +VT NL+++I NYYPV AR SN+RHRP+G+GVQGLADTF+ L MPFDS
Sbjct: 465 DFKKLHEITKVVTRNLDQVITRNYYPVPEARNSNMRHRPVGLGVQGLADTFMALRMPFDS 524
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+QLN IFETIY+ AL S E+A + G Y +Y GSP+S+G +QPD+WGV P+D WDW
Sbjct: 525 REARQLNLQIFETIYHAALEASCEMAQKLGKYPSYEGSPMSQGKIQPDLWGVEPTDLWDW 584
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I+++GVRNSLLVAPMPTASTSQILG NECFEPYTS +YSRRVLSG+F VV L
Sbjct: 585 TELRANIAQHGVRNSLLVAPMPTASTSQILGWNECFEPYTSMLYSRRVLSGDFAVVCPWL 644
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL +G+W +KN II GS+Q IP IP+++KAIYKTVWEI QK ++D+A DRG +
Sbjct: 645 LRDLINLGIWDEEMKNLIIASGGSIQHIPNIPDDIKAIYKTVWEISQKAVIDLAADRGAF 704
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE 778
ID SQSLNIH+ P+F +LTS+HF+ W RGLKTG YYLR+R AA+AI+FT+D LK+
Sbjct: 705 IDQSQSLNIHLANPSFSQLTSMHFYGWKRGLKTGAYYLRTRPAANAIQFTIDAKTLKQ 762
>gi|347535525|ref|YP_004842950.1| ribonucleoside-diphosphate reductase subunit alpha [Flavobacterium
branchiophilum FL-15]
gi|345528683|emb|CCB68713.1| Ribonucleoside-diphosphate reductase, alpha subunit [Flavobacterium
branchiophilum FL-15]
Length = 796
Score = 1078 bits (2789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/819 (62%), Positives = 645/819 (78%), Gaps = 34/819 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+VVKR+GK+E V FDKIT R+KKL YGL+ + DPV V+ +V G+Y GV+T++LD LA
Sbjct: 1 MFVVKRNGKKEPVMFDKITERVKKLCYGLN-DLVDPVKVAMRVIEGLYDGVSTTELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA+MT HPDYA LAAR+ +SNLHKNTKKSFS+T+ DMY + N R+ APL++D+V
Sbjct: 60 AETAASMTIAHPDYAQLAARVAISNLHKNTKKSFSDTMTDMYQYVNPRTNQAAPLLSDEV 119
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y +I++NAA LDS IIY RDF+YDYFGFKTLERSYLLK+ GK+VERPQHMLMRVAVGIH
Sbjct: 120 YRVIIENAAFLDSHIIYTRDFNYDYFGFKTLERSYLLKINGKIVERPQHMLMRVAVGIHL 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+D+DS I+TY +MS+++FTHA+PTLFNAGTP+ Q+SSCFL+ M+DDSI+GIYDTLK+ A
Sbjct: 180 NDLDSVIETYDLMSKKYFTHATPTLFNAGTPKPQMSSCFLLAMQDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+E WHADIFEFLDL+KN GKEE RARDLF+A+W DLFM+RVQ + W+L CPNE PGL
Sbjct: 300 IETWHADIFEFLDLKKNTGKEEMRARDLFFAMWTSDLFMKRVQEDAHWTLMCPNECPGLY 359
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ +G +FE LYT YE +GK +K ++A+ LW +IL+SQIETGTPYML+KD N+KSNQ+NL
Sbjct: 360 EVYGEQFETLYTSYEIQGKGRKTIKARELWEKILESQIETGTPYMLYKDAANQKSNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++YTS E AVCNLAS++LP +V +G F
Sbjct: 420 GTIRSSNLCTEIMEYTSKDEIAVCNLASLSLPMFVE----------------KGK----F 459
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+ + L +V VT NLNK+ID NYYPV+ SN+RHRPIG+GVQGLAD FI+L +PF S
Sbjct: 460 NHKLLYKVAKRVTRNLNKVIDRNYYPVKEGENSNMRHRPIGLGVQGLADAFIMLRLPFTS 519
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSD---R 597
EA++LN++IFET+Y+ A+ S E+A +G Y TY GSP+S+G+ Q ++WG+ +D R
Sbjct: 520 DEAKKLNQEIFETLYFAAVTASMEMAKEDGAYSTYEGSPISQGLFQYNLWGLQDADLSGR 579
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + + GVRNSLLVAPMPTASTSQILGNNE FEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWASLRKEVLQYGVRNSLLVAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
KHLL+DL ++G+W+ +K +I+ +GSVQ I IP++LK +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLNDLVKLGIWTDDLKQEIMRQNGSVQNINAIPKDLKELYKTVWEMSMKDIIDMSKHR 699
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
G ++D SQSLN+ M N+ KLTS+HF+AW GLKTGMYYLR+++A DAIKFT++ K
Sbjct: 700 GYFVDQSQSLNLFMQDANYAKLTSMHFYAWQSGLKTGMYYLRTKSAVDAIKFTLNNDK-K 758
Query: 778 ENPKVTD--------DDDAKMAQMVCSLTNREECMACGS 808
E P D +D +M ++ + + EEC CGS
Sbjct: 759 EAPATVDLHTTPIHKEDYRRMLELAKN-ADPEECEMCGS 796
>gi|349578887|dbj|GAA24051.1| K7_Rnr3p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 869
Score = 1078 bits (2789), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/775 (63%), Positives = 619/775 (79%), Gaps = 15/775 (1%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG++E V FDKIT+R+ +LSYGL D V V+Q++ +GVY GVTT +LD LA
Sbjct: 1 MYVIKRDGRKEPVQFDKITSRITRLSYGLDPNRIDAVKVTQRIISGVYSGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AET A MTT HPDYA+LAARI +SNLHK T K FS+ I+D+++ N +G AP+I+D++
Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVIEDLHDWINPATGKHAPMISDEI 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+I+M+N L+S I+YDRDF Y YFGFKTLERSYLL++ G+V ERPQH++MRVA+GIH
Sbjct: 121 YNIVMENKDTLNSAIVYDRDFQYTYFGFKTLERSYLLRLNGEVAERPQHLVMRVALGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI+S +KTY++MS R+FTHASPTLFNAGTP Q+SSCFLV MKDDSIEGIYDTLKECA+
Sbjct: 181 SDIESVLKTYNLMSLRYFTHASPTLFNAGTPHPQMSSCFLVAMKDDSIEGIYDTLKECAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGG+G+ ++NIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA++
Sbjct: 241 ISKTAGGVGLHINNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALF 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+F+D+RKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF P+ APGL
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEENGTWTLFSPSAAPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG EFE LYT+YE+EG+ K ++AQ LW+ IL++Q ETGTP+M++KD CN+K+NQQNL
Sbjct: 361 DVWGDEFEELYTRYEREGRG-KTIKAQKLWYAILQAQTETGTPFMVYKDACNRKTNQQNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLC E+++Y+SP ETAVCNLASIALP +V S K +
Sbjct: 420 GTIKSSNLCCEIVEYSSPDETAVCNLASIALPAFVEV--------------SEDGKTASY 465
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+FE+L E+ ++T NLN++ID NYYPV AR SN++HRPI +GVQGLADT+++L +PF+S
Sbjct: 466 NFERLHEIAKVITHNLNRVIDRNYYPVPEARNSNMKHRPIALGVQGLADTYMMLRLPFES 525
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIY+ L S E+A +EG Y T+ GSP SKGILQ DMW P WDW
Sbjct: 526 EEAQTLNKQIFETIYHATLEASCELAQKEGKYSTFEGSPASKGILQFDMWNAKPFGMWDW 585
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I K+G+RNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +L
Sbjct: 586 ETLRKDIVKHGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W +K +I +GS+Q +P +P+ELK +YKTVWEI QKT+++MA DR Y
Sbjct: 646 LRDLVDLGIWDDSMKQYLITQNGSIQGLPNVPQELKELYKTVWEISQKTIINMAADRAIY 705
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
ID S SLN+ + P+ GK+TS+HF+ W +GLKTGMYYLR++AA+ AI+FT+D V
Sbjct: 706 IDQSHSLNLFLQAPSMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQEV 760
>gi|366993995|ref|XP_003676762.1| hypothetical protein NCAS_0E03350 [Naumovozyma castellii CBS 4309]
gi|342302629|emb|CCC70405.1| hypothetical protein NCAS_0E03350 [Naumovozyma castellii CBS 4309]
Length = 908
Score = 1078 bits (2788), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/775 (62%), Positives = 621/775 (80%), Gaps = 15/775 (1%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG++E V FDKITAR+ +L YGL D V V+Q++ +GVY+GVTTS+LD LA
Sbjct: 1 MYVIKRDGRKEPVKFDKITARISRLCYGLDPNRIDAVKVTQRIISGVYEGVTTSELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AET A MTT HPDYA LAAR+ +SNLHK T K FS I+ ++++ N +G APLI+DDV
Sbjct: 61 AETCAYMTTVHPDYAVLAARLAISNLHKQTTKQFSTVIQQLHDYINPATGKHAPLISDDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YDI+M+N ++S I+YDRDF ++YFGFKTLERSYLL++ GKV ERPQH++MRV++GIH
Sbjct: 121 YDIVMENKDEINSAIVYDRDFQFNYFGFKTLERSYLLRLNGKVAERPQHLIMRVSLGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D+ +A++TY++MS R+F HASPTLFNAGTP+ Q+SSCFLV MKDDSIEGIYDTLKECA+
Sbjct: 181 RDLKAAMETYNLMSLRYFIHASPTLFNAGTPKPQMSSCFLVAMKDDSIEGIYDTLKECAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HN+R+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNVRSTGSYIAGTNGTSNGLIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+F+++RKNHGKEE RARDLF ALWVPDLFM+RVQ NG W+LF P+ APGL+
Sbjct: 301 LEPWHADIFDFIEIRKNHGKEEIRARDLFPALWVPDLFMKRVQENGQWTLFSPSSAPGLS 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EFE LYT+YE+EG+ K ++AQ LW+ IL++Q ETGTP++++KD CN+KSNQ+NL
Sbjct: 361 DCYGEEFEALYTRYEREGRG-KTIKAQKLWYSILEAQTETGTPFIIYKDACNEKSNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G IKSSNLC E+++Y++P ETAVCNLAS+ALP ++ S K +
Sbjct: 420 GVIKSSNLCCEIVEYSAPDETAVCNLASVALPAFIET--------------SEDGKTSTY 465
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+F+KL E+ ++T NLNK+ID NYYPV AR SN+RHRPI +GVQGLADT++LL +PF+S
Sbjct: 466 NFKKLHEIAKVITRNLNKVIDRNYYPVPEARNSNMRHRPIALGVQGLADTYMLLRLPFES 525
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+ LN IFETIY+ +L S E+A ++GPY+++ GSP SKGILQ DMW P WDW
Sbjct: 526 EEAKLLNIQIFETIYHASLEASCELAQKDGPYQSFEGSPSSKGILQMDMWDKKPYGMWDW 585
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I K G RNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +L
Sbjct: 586 DTLRKDIMKYGTRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W +K II ++GS+Q +P +P+ELKA+YKT+WEI QKT++DMA DR Y
Sbjct: 646 LRDLVDLGIWDEGMKQHIITENGSIQNLPNVPDELKALYKTIWEISQKTIIDMAADRSIY 705
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
ID S SLN+ + P GKLTS+HF+ W +GLKTGMYYLR++AA+ AI+FT+D +
Sbjct: 706 IDQSHSLNLFLRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQKI 760
>gi|298711866|emb|CBJ32887.1| ribonucleotide reductase large chain subunit [Ectocarpus
siliculosus]
Length = 797
Score = 1078 bits (2788), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/778 (65%), Positives = 631/778 (81%), Gaps = 20/778 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG++E V FDKITAR+ L YGL ++ +P L++QKV +GVY GVTTS+LDELA
Sbjct: 1 MFVIKRDGRKETVSFDKITARISHLCYGLDPKYVEPTLIAQKVISGVYPGVTTSELDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
A+TAA T HPD + LAARI VSNLHK T K+FS+TI+ ++ + ++G ++ LI+D+V
Sbjct: 61 AQTAAYQATQHPDMSLLAARISVSNLHKCTWKTFSKTIEMLHTYVLPQTGERSSLISDEV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+ I+M+N LDS I +RDF+YDYFGFKTLE+SYLL+ G VVER QHMLMRVA+GIH+
Sbjct: 121 FRIVMENKEVLDSAIQDERDFEYDYFGFKTLEKSYLLRANGFVVERIQHMLMRVAIGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DIDSAI++Y +MSQR FTHASPTLFNAGTPR QLSSCFL+ +K+DSIEGIYDTLK+CA
Sbjct: 181 TDIDSAIESYDLMSQRLFTHASPTLFNAGTPRPQLSSCFLLNVKEDSIEGIYDTLKQCAC 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIGVS+H+IRAT SY+ G+NG+SNG+VPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 241 ISKFAGGIGVSIHSIRATDSYVAGSNGSSNGLVPMLRVFNDTARYVDQGGGKRKGSFAMY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
EPWHADIF FLDLRKNHG E RARDLFYALW+PDLFM+RV+++G WSLFCPNEAPGL
Sbjct: 301 REPWHADIFAFLDLRKNHGNELERARDLFYALWIPDLFMKRVEADGDWSLFCPNEAPGLP 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LY YE +G A++ ++A+ LW I+ +Q+ETGTPYMLFKD CN KSNQ+NL
Sbjct: 361 DVFGDEFEALYKSYEAKGLARRSIKARQLWVAIMDAQVETGTPYMLFKDACNSKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVR--EMGVPMESHPSKLVGSRGSKNR 478
GTIKSSNLCTE+I+YT P E AVCNLASI+LP +V E G P
Sbjct: 421 GTIKSSNLCTEIIEYTDPDEVAVCNLASISLPAFVSAGEDGQPA---------------- 464
Query: 479 YFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPF 538
FDF +L EVT +VT NLN++IDVN+YPVE A+RSN RHRP+G+GVQGLAD FI++ PF
Sbjct: 465 -FDFHRLYEVTKVVTRNLNRVIDVNFYPVEEAKRSNFRHRPVGLGVQGLADAFIMMRFPF 523
Query: 539 DSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRW 598
+S +A +LN+DIFETIY+ A+ S E+A ++G YETY GSP S+G+LQ DMWGV PSDRW
Sbjct: 524 ESEKAAKLNRDIFETIYFGAVEASVELAEKQGTYETYEGSPASQGLLQYDMWGVTPSDRW 583
Query: 599 DWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNK 658
DW GL+ ++++G+RNSLL+APMPTAST+QILGNNE EP+TSN+Y+RRVL+GEF VVNK
Sbjct: 584 DWAGLKAKMAQHGLRNSLLLAPMPTASTAQILGNNESVEPFTSNMYNRRVLAGEFAVVNK 643
Query: 659 HLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRG 718
HLL DLT GLW+P ++N+II D GSVQ++ IP++LK +YKTVWEIKQK ++DM+ DRG
Sbjct: 644 HLLRDLTTRGLWTPSVRNQIIADQGSVQRV-DIPQDLKDLYKTVWEIKQKVVIDMSADRG 702
Query: 719 CYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
+I SQS+N+HM P GKLTS+HF++W +GLKTGMYYLR++ A AI+FTVD L
Sbjct: 703 AFICQSQSMNVHMADPTQGKLTSMHFYSWKKGLKTGMYYLRTKPKAHAIQFTVDQESL 760
>gi|381187135|ref|ZP_09894700.1| ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Flavobacterium frigoris PS1]
gi|379650745|gb|EIA09315.1| ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Flavobacterium frigoris PS1]
Length = 808
Score = 1077 bits (2786), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/775 (64%), Positives = 627/775 (80%), Gaps = 25/775 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDG +E V FDKIT R+KKL YGL+ E DPV V+ +V G+Y GV+TS+LD LA
Sbjct: 1 MYVVKRDGHKEPVMFDKITDRIKKLCYGLN-ELVDPVKVAMRVIEGLYDGVSTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA+MT HPDYA LAARI +SNLH NT KSFSET+ +MY++ N R+G APL++++V
Sbjct: 60 AETAASMTIAHPDYAQLAARIAISNLHSNTTKSFSETMNEMYHYVNPRNGQDAPLLSEEV 119
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+ +I +NA LDS IIY+RDF+YDYFGFKTLERSYLLK+ GK+VERPQHMLMRV+VGIH
Sbjct: 120 HKVIQENAEFLDSHIIYNRDFNYDYFGFKTLERSYLLKINGKIVERPQHMLMRVSVGIHL 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD++S ++TY +MS+++FTHA+PTLFN+GTP+ Q+SSCFL+ M+DDSI+GIYDTLK+ A
Sbjct: 180 DDLESVLETYDLMSKKFFTHATPTLFNSGTPKPQMSSCFLLAMQDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGG+G+S+HN+RATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGVGLSIHNVRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+E WHADIF+FLDL+KN GKEE RARDLF+A+W DLFM+RVQ +G W+L CPNE PGL
Sbjct: 300 IETWHADIFDFLDLKKNTGKEEMRARDLFFAMWTSDLFMKRVQEDGNWTLMCPNECPGLY 359
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE++YT YEK GK +K ++A LW +IL+SQIETGTPYML+KD N+KSNQ+NL
Sbjct: 360 DVYGEEFEKMYTDYEKAGKGRKTIKAHELWEKILESQIETGTPYMLYKDAVNRKSNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++YTSP E AVCNLAS++LP +V N F
Sbjct: 420 GTIRSSNLCTEIMEYTSPDEVAVCNLASLSLPMFV--------------------DNGKF 459
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D E L VT VT NLNK+ID NYYPV+ A SN+RHRPIG+GVQGLAD FI+L +PF S
Sbjct: 460 DHESLYTVTKRVTRNLNKVIDRNYYPVKEAENSNMRHRPIGLGVQGLADAFIMLRLPFTS 519
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP---SDR 597
A++LN++IFET+Y+ A+ S E+A EGPY ++ GSP+S+G Q ++WG+ S R
Sbjct: 520 DAAKKLNQEIFETLYFAAVTASMEMAKEEGPYSSFKGSPMSQGEFQYNLWGMKDEELSGR 579
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + ++GVRNSLLVAPMPTASTSQILGNNE FEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWASLRKEVMEHGVRNSLLVAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
KHLLHDL E+GLW+ +K +++ ++GSVQ + IP++LK +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLHDLVELGLWNETMKQELMRNNGSVQDL-DIPQDLKELYKTVWEMSMKDIIDMSRQR 698
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
G ++D SQSLN+ M N+ KLTS+HF+AW GLKTGMYYLR++AA DAIKFT++
Sbjct: 699 GYFVDQSQSLNLFMQNANYSKLTSMHFYAWQSGLKTGMYYLRTKAAVDAIKFTLN 753
>gi|350414638|ref|XP_003490375.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Bombus impatiens]
Length = 805
Score = 1077 bits (2786), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/817 (63%), Positives = 640/817 (78%), Gaps = 27/817 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG++E VHFDKIT+R++KL Y L +++ DP ++ +V +G+Y GVTT +LD LA
Sbjct: 7 MYVIKRDGRKEDVHFDKITSRIQKLCYNLDMDYVDPSAITFRVISGLYSGVTTVELDNLA 66
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA LAARI +SNLHK TKKSFSE I ++YN + P+I++
Sbjct: 67 AETAATMTTKHPDYAILAARIAISNLHKETKKSFSEVIHNLYNVKEHYTNEVRPVISEKY 126
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+II NA +L+S IIYDRDF Y+YFGFKTLERSYLLK+QGKVVERPQHMLMRVAV IH
Sbjct: 127 YNIIQNNANKLNSAIIYDRDFSYNYFGFKTLERSYLLKIQGKVVERPQHMLMRVAVAIHG 186
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID AI+TY+ +S+R+FTHASP+LF A T + Q+SSCFL+ M DDSI+GIYDTLK CA+
Sbjct: 187 EDIDKAIETYNFLSERYFTHASPSLFFACTRQQQMSSCFLLTMSDDSIDGIYDTLKRCAL 246
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++VH IRA G+ I GT G SNG++PMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 247 ISKSAGGIGLNVHCIRARGTPIAGTLGVSNGLIPMLRVYNNTARYVDQGGNKRPGAFAIY 306
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIFEFLDL+KN GKEE+RAR+LFYALW+PDLFM+RV NG+WSL CP+E+PGL
Sbjct: 307 LEPWHADIFEFLDLKKNIGKEENRARELFYALWIPDLFMKRVFDNGVWSLMCPHESPGLP 366
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG EFE LYT+YE E + K+ +QA++LW IL SQ+ETGTPYML+KD CN+KSN QNL
Sbjct: 367 DVWGDEFEALYTRYENEKRYKRQIQARDLWTAILVSQVETGTPYMLYKDHCNRKSNHQNL 426
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE++QY+SP E AVCNLASIA+ +V S N+ F
Sbjct: 427 GTIKSSNLCTEIVQYSSPDEIAVCNLASIAVNMFV------------------NSSNQTF 468
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DFEKL +VT IVT NL+KIIDVNYYPV A+ SN +HRPIGIG+QGLAD F+L+ PF+S
Sbjct: 469 DFEKLRKVTKIVTCNLDKIIDVNYYPVHEAKTSNFKHRPIGIGIQGLADAFLLMRYPFES 528
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ+LN IFET+YY AL S E+AA +G YETY GSPVSKGILQ DMW V P++ W+W
Sbjct: 529 EEAQKLNIQIFETLYYGALEASCELAAEKGTYETYEGSPVSKGILQYDMWNVTPTNLWNW 588
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K+GVRNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 589 TILKEKIAKHGVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYARRVLSGEFQVVNPHL 648
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE LW +KN+II ++GSVQ I +IP +LK +YKTVWEI QK ++ MA DRG +
Sbjct: 649 LRDLTERDLWDEDMKNEIIANNGSVQNIERIPNDLKMLYKTVWEIPQKVILKMAADRGAF 708
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQS+N+HM +P KLTS+HF+ W GLKTGMYYLR++ A +A++FTVD S L+
Sbjct: 709 IDQSQSMNVHMAKPTTEKLTSMHFYGWKMGLKTGMYYLRTKPAVNALQFTVDKSKLRNTV 768
Query: 781 KVTDD--------DDAKMAQM-VCSLTNREECMACGS 808
T + +D K+ ++ CS N + CMACGS
Sbjct: 769 STTSNQSVNSESSNDEKLIEVFACSRENGDACMACGS 805
>gi|254580061|ref|XP_002496016.1| ZYRO0C08514p [Zygosaccharomyces rouxii]
gi|238938907|emb|CAR27083.1| ZYRO0C08514p [Zygosaccharomyces rouxii]
Length = 921
Score = 1077 bits (2785), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/775 (63%), Positives = 623/775 (80%), Gaps = 14/775 (1%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG++E V FDKITAR+ KL YGL H D V ++Q++ +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKEPVRFDKITARISKLCYGLDPSHIDAVKITQRIISGVYEGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AET A MTT HPDYA+LAARI VSNLHK T K FS+ I D+Y++ N +G+ +P+I+D++
Sbjct: 61 AETCAYMTTVHPDYATLAARIAVSNLHKQTTKQFSQVISDLYHYVNPANGVHSPMISDEI 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
++I+M N L+S I+YDRDF ++YFGFKTLERSYLL++ G ERPQH++MRV++GIH
Sbjct: 121 FNIVMTNKDELNSAIVYDRDFQFNYFGFKTLERSYLLRINGLTAERPQHLIMRVSLGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI SAI+TY++MS R+F HASPTLFNAGTP Q++SCFLV MKDDSIEGIYD+LKECA+
Sbjct: 181 EDIKSAIETYNLMSLRYFIHASPTLFNAGTPHPQMASCFLVAMKDDSIEGIYDSLKECAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DIF+F+D+RKNHGKEE RARDLF ALW+PDLFM+RV+ N W+LF P+EAPGLA
Sbjct: 301 LEPWHSDIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEKNEEWTLFSPSEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE+LY +YE+EG+ +K ++AQ LW+ IL++Q ETGTP+ML+KD CN+KSNQ+NL
Sbjct: 361 DVYGEEFEKLYERYEQEGRGRKTIRAQKLWYAILEAQTETGTPFMLYKDACNEKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G IKSSNLC E+++Y+ ETA CNLASIALP V V + G K +++
Sbjct: 421 GVIKSSNLCCEIVEYSDKDETAACNLASIALPSCVE-------------VSADG-KEQWY 466
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
F KL EV +T NLNK+ID NYYPV A+RSN+RHRPI +GV GLADTF++L +PF+S
Sbjct: 467 SFAKLHEVAKAITRNLNKVIDRNYYPVPEAKRSNMRHRPIALGVNGLADTFMMLRLPFES 526
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+ LN+ IFETIY+ AL S E+A G Y TY GSP+S+G+LQ D+W NPS+ WDW
Sbjct: 527 PEAKILNQQIFETIYHGALEQSCELAKIHGTYSTYEGSPISQGLLQFDLWEKNPSELWDW 586
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I ++GVRNSLLVAPMPTASTSQILG NECFEPYTSN+YSRRVLSGEF +VN +L
Sbjct: 587 EPLRQGIKEHGVRNSLLVAPMPTASTSQILGYNECFEPYTSNMYSRRVLSGEFQIVNPYL 646
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W +K +II D+GS+Q IP IP+E+K +YKTVWEI Q+ ++DMA DR +
Sbjct: 647 LKDLVDLGIWDESMKQQIITDNGSIQNIPNIPQEIKDLYKTVWEISQRHVLDMAADRAVF 706
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
ID S SLNIHM P GKLTS+HF+ W +GLKTGMYYLR++AA+ AI+FT+D +V
Sbjct: 707 IDQSHSLNIHMRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDKNV 761
>gi|291244082|ref|XP_002741928.1| PREDICTED: ribonucleoside-diphosphate reductase M1 chain-like,
partial [Saccoglossus kowalevskii]
Length = 759
Score = 1077 bits (2784), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/776 (65%), Positives = 621/776 (80%), Gaps = 25/776 (3%)
Query: 39 VSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETI 98
++ +V TGVY GVTT +LD LAAETAA+MTT HPDYA LAARI VSNLHK TKK+FS +
Sbjct: 3 ITMRVITGVYPGVTTVELDTLAAETAASMTTKHPDYAVLAARIAVSNLHKETKKTFSAVM 62
Query: 99 KDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLK 158
D++N+ N R+ +P+I+ ++DII NA RL+S IIYDRDF+Y++FGFKTLERSYLLK
Sbjct: 63 DDLFNYVNPRNNKPSPMISTKIHDIITNNAERLNSAIIYDRDFNYNFFGFKTLERSYLLK 122
Query: 159 VQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSC 218
+ GKV ERPQHMLMRV+VGIH +DI+ AI+TY+++S++WFTHASPTLFNAGT R QLSSC
Sbjct: 123 INGKVAERPQHMLMRVSVGIHHNDIEGAIETYNLLSEKWFTHASPTLFNAGTCRPQLSSC 182
Query: 219 FLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRV 278
FL+ MKDDSIEGIYDTLK+CA+ISKSAGGIGV+VH IRA+GSYI GTNG+SNG++PMLRV
Sbjct: 183 FLLTMKDDSIEGIYDTLKQCALISKSAGGIGVNVHCIRASGSYIAGTNGSSNGLLPMLRV 242
Query: 279 FNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLF 338
+N+TARYVDQGG KR GAFA+YLEPWHADIF+FLD +KN GKEE RARDLFYALW+PDLF
Sbjct: 243 YNNTARYVDQGGNKRPGAFAIYLEPWHADIFDFLDAKKNTGKEEQRARDLFYALWIPDLF 302
Query: 339 MERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQI 398
M+RV++N W+L CPNE PGL D WG EFE LY KYE+E K K ++AQ LW+ I+++Q
Sbjct: 303 MKRVETNQDWTLMCPNECPGLHDVWGKEFEDLYEKYERENKGTKTIKAQLLWYAIIEAQT 362
Query: 399 ETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREM 458
ETGTPYML+KD CN+KSN QNLGTIK SNLCTE+++++SP E AVCNLASIA+ +V+
Sbjct: 363 ETGTPYMLYKDACNRKSNHQNLGTIKCSNLCTEIVEFSSPDEVAVCNLASIAVNMFVK-- 420
Query: 459 GVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHR 518
++ +DF+KL +VTG++ NLNKIIDVN+YPVE AR SN+RHR
Sbjct: 421 -----------------PDKTYDFKKLEQVTGVIVRNLNKIIDVNFYPVEEARNSNMRHR 463
Query: 519 PIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYH-- 576
PIGIGVQGLAD FIL+ PFDS EA LNK IFETIYY AL+ S E+A R+G YE+Y
Sbjct: 464 PIGIGVQGLADAFILMRFPFDSDEAMLLNKQIFETIYYGALKASCELAERDGAYESYKFG 523
Query: 577 -GSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNEC 635
G PVSKGILQ DMW V P+D DW L+ I+ +G+RNSLL+APMPTAST+QILGNNE
Sbjct: 524 DGCPVSKGILQYDMWDVTPTDLHDWDALKKDIATHGLRNSLLLAPMPTASTAQILGNNES 583
Query: 636 FEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEEL 695
EPYT+NIYSRRVLSGEF VVN HLL DLTEMGLW+ +KN +I ++GS+Q I IP+ +
Sbjct: 584 VEPYTTNIYSRRVLSGEFQVVNHHLLKDLTEMGLWNDDMKNLLIANNGSIQSIDGIPDHI 643
Query: 696 KAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGM 755
K +Y+TVWEI QK ++ MA DRG +ID SQSLNIH+ +PN+GKLTS+HF AW +GLKTGM
Sbjct: 644 KKLYRTVWEISQKNILIMAADRGAFIDQSQSLNIHIAEPNYGKLTSMHFFAWKQGLKTGM 703
Query: 756 YYLRSRAAADAIKFTVDTSVLKENPKV---TDDDDAKMAQMVCSLTNREECMACGS 808
YYLR+R AAD IKFTV+ + LK V + ++ A MVCSL N+++C+ CGS
Sbjct: 704 YYLRTRPAADPIKFTVNKTSLKPTTNVEAAAEKEEENQAAMVCSLQNKDDCLMCGS 759
>gi|323449664|gb|EGB05550.1| hypothetical protein AURANDRAFT_30730 [Aureococcus anophagefferens]
Length = 787
Score = 1077 bits (2784), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/808 (61%), Positives = 626/808 (77%), Gaps = 21/808 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M VVKR+GK+E V +DKIT+R+KKL YGL ++ P ++QKV GVY GVTT +LDELA
Sbjct: 1 MQVVKRNGKKETVRYDKITSRIKKLCYGLDAKYIKPNQITQKVIQGVYDGVTTHELDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
A+T A M T HPD++ LAARI VSNLHK+T K+FS+ ++ ++ H + ++ A LI+D+
Sbjct: 61 AQTTAYMATQHPDFSVLAARISVSNLHKSTDKTFSDVVEKLHKHVHPKTKKPAALISDET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y + K+ +++ I+YDRDF+YDYFGFKTLERSYL+++ G + ERPQHM+MRVA+GIH
Sbjct: 121 YATVQKHKDAINAAIVYDRDFEYDYFGFKTLERSYLMRLDGAIAERPQHMIMRVALGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD+ A++TY MMSQ+ FTHA+PTLFNAGTPR QLSSCFL+ MK+DSIEGIYDTLK CA
Sbjct: 181 DDLAGALETYEMMSQKMFTHATPTLFNAGTPRPQLSSCFLLAMKEDSIEGIYDTLKRCAA 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+SVHNIRAT SYIRG+NGTSNGIVPMLRV+NDTARYVDQGGGKRKG+FA+Y
Sbjct: 241 ISKYAGGIGLSVHNIRATDSYIRGSNGTSNGIVPMLRVYNDTARYVDQGGGKRKGSFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADI +LDL+KNHG E RARDLFY LW+PDLFM+RV++NG WSL CPNE PGLA
Sbjct: 301 LEPWHADIETWLDLKKNHGNELERARDLFYGLWIPDLFMKRVEANGSWSLMCPNECPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC G EFE LY +YE EG+A+K + AQ LWF IL SQ+ETGTPYML+KD CN KSNQ++L
Sbjct: 361 DCHGAEFEALYERYEAEGRARKAIPAQQLWFAILDSQVETGTPYMLYKDACNGKSNQKHL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+++YT+P E AVCNLASI L +V G F
Sbjct: 421 GTIKSSNLCTEIVEYTAPDEIAVCNLASINLTAHVEGSGDAAT----------------F 464
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL +VT+NLNK+IDVNYYPVE A+ SNL+HRPIGIGVQG+AD + L P++S
Sbjct: 465 DFAKLKRTAYVVTKNLNKVIDVNYYPVEEAKSSNLKHRPIGIGVQGMADALVKLRYPYES 524
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
+A+++NKD+FETIY+ A+ S ++A GPY++Y GSP S+G+ Q D+W V PSDRWDW
Sbjct: 525 DDAKRINKDVFETIYFGAMEASIDLARELGPYDSYEGSPTSQGLFQFDLWNVKPSDRWDW 584
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
GLR + ++G RNSLL+APMPTAST+QILGNNE FEP+TSN+Y+RRVL+GEF VVNK+L
Sbjct: 585 EGLRARLGEHGCRNSLLLAPMPTASTAQILGNNESFEPFTSNMYTRRVLAGEFAVVNKYL 644
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL GLW+ I+N+II D GSVQ + IP++LKA+YKT WEIKQK ++DM+ DRG +
Sbjct: 645 LQDLIARGLWTSEIRNQIIADKGSVQGVAAIPDDLKALYKTTWEIKQKCVLDMSADRGAF 704
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
I SQSLN+H+ PN GKLTS+HF+AW +GLKTGMYYLR+R ADAI FTVD ++ ++
Sbjct: 705 ICQSQSLNLHIADPNPGKLTSMHFYAWKKGLKTGMYYLRTRPKADAIAFTVDQAMAAKS- 763
Query: 781 KVTDDDDAKMAQMVCSLTNREECMACGS 808
A + EC++CG+
Sbjct: 764 ----RGGAALKPANGQQEEEHECLSCGA 787
>gi|294948956|ref|XP_002785979.1| ribonucleoside-diphosphate reductase, large subunit, putative
[Perkinsus marinus ATCC 50983]
gi|294948958|ref|XP_002785980.1| ribonucleoside-diphosphate reductase, large subunit, putative
[Perkinsus marinus ATCC 50983]
gi|239900087|gb|EER17775.1| ribonucleoside-diphosphate reductase, large subunit, putative
[Perkinsus marinus ATCC 50983]
gi|239900088|gb|EER17776.1| ribonucleoside-diphosphate reductase, large subunit, putative
[Perkinsus marinus ATCC 50983]
Length = 792
Score = 1076 bits (2783), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 513/809 (63%), Positives = 631/809 (77%), Gaps = 24/809 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KR+G++ V FDKIT R++ L+ GL+ ++ D ++QKV G+Y GVTT++LD LA
Sbjct: 3 MYVIKRNGQKADVQFDKITRRIRPLTRGLNEDYVDVTQITQKVAEGIYPGVTTTELDSLA 62
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AET A M+ HPD+++LAARI VSNLHKNT + FS+T+ ++Y + R G APL++++V
Sbjct: 63 AETCAYMSQVHPDFSTLAARIAVSNLHKNTHEKFSDTVTELYQITDGR-GRHAPLVSEEV 121
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRVAVGI 178
Y+I+M NA +LD I Y+RDFDYDYFGFKTLERSYLLK +ERPQHM+MRVAVGI
Sbjct: 122 YNIVMANAEKLDKAIDYERDFDYDYFGFKTLERSYLLKRPSDKSCIERPQHMIMRVAVGI 181
Query: 179 HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKEC 238
H DD+D+AI+TY +MS R FTHA+PTLFN+GTP Q+SSCFL+ MK DSIEGIYDTLK+C
Sbjct: 182 HGDDVDAAIETYDLMSTRVFTHATPTLFNSGTPHPQMSSCFLLSMKGDSIEGIYDTLKQC 241
Query: 239 AIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA 298
A+ISK+AGGIGV++ IRAT SYIRGTNG SNGIVPMLRVFNDTARYVDQGGGKRKG+FA
Sbjct: 242 AMISKTAGGIGVAITGIRATESYIRGTNGFSNGIVPMLRVFNDTARYVDQGGGKRKGSFA 301
Query: 299 VYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPG 358
VYLEPWHAD+FEFLDL+KNHGKEE RARDLFYALW+PDLFM+RV SNG W+LFCPNEAPG
Sbjct: 302 VYLEPWHADVFEFLDLKKNHGKEEQRARDLFYALWIPDLFMKRVMSNGDWTLFCPNEAPG 361
Query: 359 LADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQ 418
L D +G EFE LY KYEK+G +K V+AQ+LWF+IL+SQ ETG PYML+KD+ N+KSNQ+
Sbjct: 362 LQDTYGDEFEALYEKYEKDGIGRKTVKAQSLWFKILESQQETGIPYMLYKDSANRKSNQK 421
Query: 419 NLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNR 478
NLGTI+ SNLC E+I+YTSP E AVCNLASIAL +V + K R
Sbjct: 422 NLGTIRCSNLCCEIIEYTSPDEVAVCNLASIALNMFVDK------------------KTR 463
Query: 479 YFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPF 538
+DF++L VT +VT NLNK+ID NYYPV ARRSN+RHRPIGIGVQGLAD F+L+ P+
Sbjct: 464 TYDFDRLHRVTKVVTRNLNKVIDRNYYPVPEARRSNMRHRPIGIGVQGLADAFLLMRFPY 523
Query: 539 DSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP-SDR 597
+S EA +LN +IFETIY+ A S E+A ++GPYET+ GSP S+GILQ DMW V P S R
Sbjct: 524 ESPEALKLNNEIFETIYHAACEASMELAKKDGPYETFEGSPASEGILQFDMWDVTPDSGR 583
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW L++ I KNG+RNSLL+APMPTAST+QILGNNE FEPYT NIY RRVL+GEFV VN
Sbjct: 584 WDWNSLKEEIKKNGMRNSLLIAPMPTASTAQILGNNEAFEPYTQNIYVRRVLAGEFVQVN 643
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
+HL+ DL E+GLW+ IK+KII GSVQ + +IP+E++ +YKTVWEIKQK ++DMA R
Sbjct: 644 RHLVDDLMELGLWNDEIKDKIIRQKGSVQGVEEIPKEVQELYKTVWEIKQKKILDMAAGR 703
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
G YID SQSLNIHM KL+S+HF+ W GLKTG YYLR++AAADAI+FT+D +
Sbjct: 704 GPYIDQSQSLNIHMTNCTNAKLSSMHFYGWKLGLKTGQYYLRTKAAADAIQFTLDAKKIT 763
Query: 778 ENPKVTDDDDAKMAQMVCSLTNREECMAC 806
+ Q V + E C+AC
Sbjct: 764 MESPLKPRTSPLKPQYVQE--DEETCIAC 790
>gi|383853838|ref|XP_003702429.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Megachile rotundata]
Length = 821
Score = 1076 bits (2782), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/833 (62%), Positives = 641/833 (76%), Gaps = 43/833 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+VVKRDG++E VHFDKIT+R++KL Y L +++ DP ++ +V +G+Y GVTT +LD LA
Sbjct: 7 MFVVKRDGRKEDVHFDKITSRIQKLCYNLDMDYVDPSAITFRVISGLYSGVTTVELDNLA 66
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA LAARI VSNLHK TKKSFSE I D+Y+ + P+I++
Sbjct: 67 AETAATMTTKHPDYAVLAARIAVSNLHKETKKSFSEVIHDLYHVQEQYLNKPRPVISEKY 126
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+II NA++L+S IIYDRDF Y+YFGFKTLERSYLLK+ GKVVERPQHMLMRVAV IH
Sbjct: 127 YNIIQNNASKLNSAIIYDRDFSYNYFGFKTLERSYLLKIHGKVVERPQHMLMRVAVAIHG 186
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI+ AI+TY+ +S+R+FTHASPTLF+A T Q+SSCFL+ M +DSIEGIYDTLK CA+
Sbjct: 187 EDIEKAIETYNFLSERYFTHASPTLFSACTVTQQMSSCFLLSMTEDSIEGIYDTLKRCAL 246
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++VH IRA G+ I GT G SNG+VPMLRV+N+TARYVDQGG KR GAFAVY
Sbjct: 247 ISKSAGGIGLNVHCIRARGTPIAGTLGVSNGLVPMLRVYNNTARYVDQGGNKRPGAFAVY 306
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIFEFLDL+KN GKEE+RAR+LFYALW+PDLFM+RV NG+W+L CP+E+PGLA
Sbjct: 307 LEPWHADIFEFLDLKKNTGKEENRARELFYALWIPDLFMKRVLENGVWTLMCPHESPGLA 366
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG EFE LYT+YE E + K+ +QA++LW IL +Q+ETGTPYML+KD CN+KSNQQN+
Sbjct: 367 DVWGDEFETLYTRYENEKRFKRQIQARDLWTAILIAQVETGTPYMLYKDHCNRKSNQQNI 426
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTEV+QY+S E AVCNLASIA+ +V S N+ F
Sbjct: 427 GTIKSSNLCTEVVQYSSADEVAVCNLASIAVNMFV------------------NSSNKTF 468
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL +VT IVT NL+K+IDVNYYP+ A++SN RHRPIGIG+QGLAD F+L+ PF+S
Sbjct: 469 DFQKLKKVTKIVTCNLDKVIDVNYYPIPEAKKSNFRHRPIGIGIQGLADAFLLMRYPFES 528
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ+LN IFET+YY AL S E+A +G YETY GSPVSKGILQ DMW V P+D WDW
Sbjct: 529 EEAQKLNIQIFETLYYGALEASCELAEEKGTYETYEGSPVSKGILQYDMWNVTPTDLWDW 588
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K+GVRNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 589 AALKEKIAKHGVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 648
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE LW +KN+II ++GS+Q I +IP +LK +YKTVWEI QK ++ MA DRG +
Sbjct: 649 LRDLTERDLWDENMKNEIIANNGSIQDIERIPSDLKMLYKTVWEISQKVVLKMAADRGAF 708
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLN+HM +P KLTS+HF+ W GLKTGMYYLR++ AA+A++FTVD S L+
Sbjct: 709 IDQSQSLNVHMAKPTTEKLTSMHFYGWQMGLKTGMYYLRTKPAANALQFTVDKSKLRSAT 768
Query: 781 KV---------TDDDDAKM----------------AQMVCSLTNREECMACGS 808
+ +D+ M A + CS N + CMACGS
Sbjct: 769 STPANQSLNLESGNDEGYMNSSKKWLQDRSSEDIEAVLACSRENGDACMACGS 821
>gi|150024560|ref|YP_001295386.1| ribonucleoside-diphosphate reductase subunit alpha [Flavobacterium
psychrophilum JIP02/86]
gi|149771101|emb|CAL42568.1| Ribonucleoside-diphosphate reductase, alpha subunit [Flavobacterium
psychrophilum JIP02/86]
Length = 806
Score = 1075 bits (2780), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/829 (61%), Positives = 644/829 (77%), Gaps = 44/829 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG +E V FDKIT R+KKL YGL+ + D V V+ +V G+Y GV TS+LD LA
Sbjct: 1 MYVIKRDGHKEPVMFDKITERIKKLCYGLN-DLVDAVKVAMRVIEGLYDGVATSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA+MT HPDYA LAARI +SNLH NT KSFSET+ +MY++ N R+G +APL++++V
Sbjct: 60 AETAASMTIAHPDYAQLAARIAISNLHSNTNKSFSETMNEMYHYVNPRNGQEAPLLSEEV 119
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+ +I +NAA L+S IIY RDF+YDYFGFKTLERSYLLK+ GK+VERPQHMLMRV+VGIH
Sbjct: 120 HTVIQENAAFLNSHIIYTRDFNYDYFGFKTLERSYLLKINGKIVERPQHMLMRVSVGIHL 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+D+ S I+TY +MS+++FTHA+PTLFNAGTP+ Q+SSCFL+ M+DDSI+GIYDTLK+ A
Sbjct: 180 NDLKSVIETYDLMSKKFFTHATPTLFNAGTPKPQMSSCFLLAMQDDSIDGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HN+RATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNVRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+E WHADIFEFLDL+KN GKEE RARDLF+A+W DLFM+RV+ NG W+L CPNE PGL
Sbjct: 300 IETWHADIFEFLDLKKNTGKEEMRARDLFFAMWTSDLFMKRVEENGDWTLMCPNECPGLY 359
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE++YT YEK GK +K ++A LW +IL+SQIETGTPYML+KD N+KSNQ+NL
Sbjct: 360 DVYGEEFEKMYTNYEKAGKGRKTIKAHELWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++YTS E AVCNLAS++LP ++ +N F
Sbjct: 420 GTIRSSNLCTEIMEYTSKDEIAVCNLASLSLPMFI--------------------ENGTF 459
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+ + L VT VT NLNK+ID NYYPV+ SN RHRPIG+GVQGLAD FI+L +PF S
Sbjct: 460 NHDLLFTVTKRVTRNLNKVIDRNYYPVKEGENSNKRHRPIGLGVQGLADAFIMLRLPFTS 519
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP---SDR 597
+A++LN++IFET+Y+ A+ S E+A EGPY T+ GSP+S+G Q ++WG+ S R
Sbjct: 520 DQAKKLNQEIFETLYFAAVTASMEMAIEEGPYSTFAGSPISQGEFQYNLWGLKDEELSGR 579
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + KNGVRNSLLVAPMPTASTSQILGNNE FEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWANLRKEVMKNGVRNSLLVAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
KHLL+DL E GLW+ +K +++ ++GSVQK+ IP++LK +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLNDLVERGLWTEDLKQQLMRENGSVQKL-NIPQDLKELYKTVWEMSMKDIIDMSRQR 698
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD----- 772
G ++D SQSLN+ M N+ KLTS+HF+AW GLKTGMYYLR++AA DAIKFT++
Sbjct: 699 GYFVDQSQSLNLFMQDANYSKLTSMHFYAWKSGLKTGMYYLRTKAAVDAIKFTLNNDKKA 758
Query: 773 -------------TSVLKENPKVTDDDDAKMAQMVCSLTNREECMACGS 808
T V + +T+++ + M Q+ + T E+C CGS
Sbjct: 759 EPITIEVKQQTTLTEVEPQTKTMTNEEYSAMIQLAKNAT-PEDCEMCGS 806
>gi|398364373|ref|NP_012198.3| ribonucleotide-diphosphate reductase subunit RNR3 [Saccharomyces
cerevisiae S288c]
gi|730516|sp|P21672.4|RIR3_YEAST RecName: Full=Ribonucleoside-diphosphate reductase large chain 2;
AltName: Full=Ribonucleotide reductase DNA
damage-inducible regulatory subunit 2; AltName:
Full=Ribonucleotide reductase R1 subunit 2; AltName:
Full=Ribonucleotide reductase large subunit 2
gi|151943097|gb|EDN61432.1| ribonucleotide reductase, large (R1) subunit [Saccharomyces
cerevisiae YJM789]
gi|285812585|tpg|DAA08484.1| TPA: ribonucleotide-diphosphate reductase subunit RNR3
[Saccharomyces cerevisiae S288c]
Length = 869
Score = 1074 bits (2778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/775 (62%), Positives = 618/775 (79%), Gaps = 15/775 (1%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG++E V FDKIT+R+ +LSYGL D V V+Q++ +GVY GVTT +LD LA
Sbjct: 1 MYVIKRDGRKEPVQFDKITSRITRLSYGLDPNRIDAVKVTQRIISGVYSGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AET A MTT HPDYA+LAARI +SNLHK T K FS+ I+D+++ N +G AP+I+D++
Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVIEDLHDWINPATGKHAPMISDEI 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+I+M+N L+S I+YDRDF Y YFGFKTLERSYLL++ G+V ERPQH++MRVA+GIH
Sbjct: 121 YNIVMENKDTLNSAIVYDRDFQYTYFGFKTLERSYLLRLNGEVAERPQHLVMRVALGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI+S +KTY++MS R+FTHASPTLFNAGTP Q+SSCFL+ MKDDSIEGIYDTLKECA+
Sbjct: 181 SDIESVLKTYNLMSLRYFTHASPTLFNAGTPHPQMSSCFLIAMKDDSIEGIYDTLKECAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGG+G+ ++NIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA++
Sbjct: 241 ISKTAGGVGLHINNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALF 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+F+D+RK HGKEE RARDLF ALW+PDLFM+RVQ +G W+LF P+ APGL
Sbjct: 301 LEPWHADIFDFVDIRKTHGKEEIRARDLFPALWIPDLFMKRVQEDGPWTLFSPSAAPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG EFE LYT+YE+EG+ K ++AQ LW+ IL++Q ETGTP+M++KD CN+K+NQQNL
Sbjct: 361 DVWGDEFEELYTRYEREGRG-KTIKAQKLWYAILQAQTETGTPFMVYKDACNRKTNQQNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLC E+++Y+SP ETAVCNLASIALP +V S K +
Sbjct: 420 GTIKSSNLCCEIVEYSSPDETAVCNLASIALPAFVEV--------------SEDGKTASY 465
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+FE+L E+ ++T NLN++ID NYYPV AR SN++HRPI +GVQGLADT+++L +PF+S
Sbjct: 466 NFERLHEIAKVITHNLNRVIDRNYYPVPEARNSNMKHRPIALGVQGLADTYMMLRLPFES 525
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIY+ L S E+A +EG Y T+ GSP SKGILQ DMW P WDW
Sbjct: 526 EEAQTLNKQIFETIYHATLEASCELAQKEGKYSTFEGSPASKGILQFDMWNAKPFGMWDW 585
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I K+G+RNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +L
Sbjct: 586 ETLRKDIVKHGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W +K +I +GS+Q +P +P+ELK +YKTVWEI QKT+++MA DR Y
Sbjct: 646 LRDLVDLGIWDDSMKQYLITQNGSIQGLPNVPQELKELYKTVWEISQKTIINMAADRAIY 705
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
ID S SLN+ + P+ GK+TS+HF+ W +GLKTGMYYLR++AA+ AI+FT+D V
Sbjct: 706 IDQSHSLNLFLQAPSMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQEV 760
>gi|259147192|emb|CAY80445.1| Rnr3p [Saccharomyces cerevisiae EC1118]
Length = 885
Score = 1074 bits (2778), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/775 (62%), Positives = 618/775 (79%), Gaps = 15/775 (1%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG++E V FDKIT+R+ +LSYGL D V V+Q++ +GVY GVTT +LD LA
Sbjct: 17 MYVIKRDGRKEPVQFDKITSRITRLSYGLDPNRIDAVKVTQRIISGVYSGVTTVELDNLA 76
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AET A MTT HPDYA+LAARI +SNLHK T K FS+ I+D+++ N +G AP+I+D++
Sbjct: 77 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVIEDLHDWINPATGKHAPMISDEI 136
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+I+M+N L+S I+YDRDF Y YFGFKTLERSYLL++ G+V ERPQH++MRVA+GIH
Sbjct: 137 YNIVMENKDTLNSAIVYDRDFQYTYFGFKTLERSYLLRLNGEVAERPQHLVMRVALGIHG 196
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI+S +KTY++MS R+FTHASPTLFNAGTP Q+SSCFL+ MKDDSIEGIYDTLKECA+
Sbjct: 197 SDIESVLKTYNLMSLRYFTHASPTLFNAGTPHPQMSSCFLIAMKDDSIEGIYDTLKECAM 256
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGG+G+ ++NIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA++
Sbjct: 257 ISKTAGGVGLHINNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALF 316
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+F+D+RK HGKEE RARDLF ALW+PDLFM+RVQ +G W+LF P+ APGL
Sbjct: 317 LEPWHADIFDFVDIRKTHGKEEIRARDLFPALWIPDLFMKRVQEDGSWTLFSPSAAPGLD 376
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG EFE LYT+YE+EG+ K ++AQ LW+ IL++Q ETGTP+M++KD CN+K+NQQNL
Sbjct: 377 DVWGDEFEELYTRYEREGRG-KTIKAQKLWYAILQAQTETGTPFMVYKDACNRKTNQQNL 435
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLC E+++Y+SP ETAVCNLASIALP +V S K +
Sbjct: 436 GTIKSSNLCCEIVEYSSPDETAVCNLASIALPAFVEV--------------SEDGKTASY 481
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+FE+L E+ ++T NLN++ID NYYPV AR SN++HRPI +GVQGLADT+++L +PF+S
Sbjct: 482 NFERLHEIAKVITHNLNRVIDRNYYPVPEARNSNMKHRPIALGVQGLADTYMMLRLPFES 541
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIY+ L S E+A +EG Y T+ GSP SKGILQ DMW P WDW
Sbjct: 542 EEAQTLNKQIFETIYHATLEASCELAQKEGKYSTFEGSPASKGILQFDMWNAKPFGMWDW 601
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I K+G+RNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +L
Sbjct: 602 ETLRKDIVKHGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 661
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W +K +I +GS+Q +P +P+ELK +YKTVWEI QKT+++MA DR Y
Sbjct: 662 LRDLVDLGIWDDSMKQYLITQNGSIQGLPNVPQELKELYKTVWEISQKTIINMAADRAIY 721
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
ID S SLN+ + P+ GK+TS+HF+ W +GLKTGMYYLR++AA+ AI+FT+D V
Sbjct: 722 IDQSHSLNLFLQAPSMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQEV 776
>gi|557803|emb|CAA86157.1| rir3 [Saccharomyces cerevisiae]
gi|323304492|gb|EGA58258.1| Rnr3p [Saccharomyces cerevisiae FostersB]
gi|392298850|gb|EIW09946.1| Rnr3p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 885
Score = 1074 bits (2777), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 487/775 (62%), Positives = 618/775 (79%), Gaps = 15/775 (1%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG++E V FDKIT+R+ +LSYGL D V V+Q++ +GVY GVTT +LD LA
Sbjct: 17 MYVIKRDGRKEPVQFDKITSRITRLSYGLDPNRIDAVKVTQRIISGVYSGVTTVELDNLA 76
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AET A MTT HPDYA+LAARI +SNLHK T K FS+ I+D+++ N +G AP+I+D++
Sbjct: 77 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVIEDLHDWINPATGKHAPMISDEI 136
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+I+M+N L+S I+YDRDF Y YFGFKTLERSYLL++ G+V ERPQH++MRVA+GIH
Sbjct: 137 YNIVMENKDTLNSAIVYDRDFQYTYFGFKTLERSYLLRLNGEVAERPQHLVMRVALGIHG 196
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI+S +KTY++MS R+FTHASPTLFNAGTP Q+SSCFL+ MKDDSIEGIYDTLKECA+
Sbjct: 197 SDIESVLKTYNLMSLRYFTHASPTLFNAGTPHPQMSSCFLIAMKDDSIEGIYDTLKECAM 256
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGG+G+ ++NIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA++
Sbjct: 257 ISKTAGGVGLHINNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALF 316
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+F+D+RK HGKEE RARDLF ALW+PDLFM+RVQ +G W+LF P+ APGL
Sbjct: 317 LEPWHADIFDFVDIRKTHGKEEIRARDLFPALWIPDLFMKRVQEDGPWTLFSPSAAPGLD 376
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG EFE LYT+YE+EG+ K ++AQ LW+ IL++Q ETGTP+M++KD CN+K+NQQNL
Sbjct: 377 DVWGDEFEELYTRYEREGRG-KTIKAQKLWYAILQAQTETGTPFMVYKDACNRKTNQQNL 435
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLC E+++Y+SP ETAVCNLASIALP +V S K +
Sbjct: 436 GTIKSSNLCCEIVEYSSPDETAVCNLASIALPAFVEV--------------SEDGKTASY 481
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+FE+L E+ ++T NLN++ID NYYPV AR SN++HRPI +GVQGLADT+++L +PF+S
Sbjct: 482 NFERLHEIAKVITHNLNRVIDRNYYPVPEARNSNMKHRPIALGVQGLADTYMMLRLPFES 541
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIY+ L S E+A +EG Y T+ GSP SKGILQ DMW P WDW
Sbjct: 542 EEAQTLNKQIFETIYHATLEASCELAQKEGKYSTFEGSPASKGILQFDMWNAKPFGMWDW 601
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I K+G+RNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +L
Sbjct: 602 ETLRKDIVKHGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 661
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W +K +I +GS+Q +P +P+ELK +YKTVWEI QKT+++MA DR Y
Sbjct: 662 LRDLVDLGIWDDSMKQYLITQNGSIQGLPNVPQELKELYKTVWEISQKTIINMAADRAIY 721
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
ID S SLN+ + P+ GK+TS+HF+ W +GLKTGMYYLR++AA+ AI+FT+D V
Sbjct: 722 IDQSHSLNLFLQAPSMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQEV 776
>gi|403215030|emb|CCK69530.1| hypothetical protein KNAG_0C04280 [Kazachstania naganishii CBS
8797]
Length = 845
Score = 1073 bits (2776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/799 (61%), Positives = 631/799 (78%), Gaps = 26/799 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG++E V FDKITAR+ +L YGL + DPV+V+Q++ +GVY+GV+T +LD LA
Sbjct: 1 MYVIKRDGRKEPVRFDKITARITRLCYGLDPKRVDPVIVTQRIISGVYEGVSTEELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDY +LAAR+ +SNLHK T K FS+ + D+Y++ N +G AP+I+D V
Sbjct: 61 AETAAYMTTIHPDYGTLAARLAISNLHKQTTKLFSQVVSDLYHYVNPANGKHAPMISDKV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YDI+MKN L+S I+YDRDF Y+YFGFKTLERSYLL++ GKV ERPQH++MRVA+GIH
Sbjct: 121 YDIVMKNKELLNSTIVYDRDFAYNYFGFKTLERSYLLRINGKVAERPQHLVMRVALGIHL 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD++S ++TY++MS R+FTHASPTLFNAGTPR Q+SSCFL+ MKDDSIEGI+DTLKECA+
Sbjct: 181 DDLESVVRTYNLMSMRYFTHASPTLFNAGTPRPQMSSCFLIAMKDDSIEGIFDTLKECAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIR+TGSYI GTNGTSNG++PM+RVFN+T+RYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMIRVFNNTSRYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+F+D+RKNHGKEE RARDLF ALW+PDLFM+RV++NG W+LF P++APGL+
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEANGDWTLFSPSDAPGLS 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG E+E+LY +YE+EG+ K ++A LW+ IL++Q ETGTP+M++KD CN+KSNQQNL
Sbjct: 361 DVWGEEYEQLYERYEREGRG-KTIKAHKLWYAILEAQTETGTPFMIYKDACNRKSNQQNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLC E+++Y++P ETAVCNLASIALP ++ S K +
Sbjct: 420 GTIKSSNLCCEIVEYSAPDETAVCNLASIALPAFIET--------------SEDGKVSTY 465
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+F+KL E++ +VT NLN++ID NYYPV A SN+RHRPI +GVQGLADT++LL +PF+S
Sbjct: 466 NFDKLHEISKVVTHNLNRVIDNNYYPVPEAENSNMRHRPIALGVQGLADTYMLLRLPFES 525
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+ LNK IFETIY+ +L S E+A ++G Y ++ G P+SKGI Q DMW P WDW
Sbjct: 526 EEARTLNKQIFETIYHASLEASCELAQKDGTYSSWEGCPMSKGIFQMDMWDAKPFGMWDW 585
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I ++G+RNSL +APMPTASTSQI+G NECFEP TSN+Y RRVLSGEF VVN +L
Sbjct: 586 ETLRKDIIEHGLRNSLTMAPMPTASTSQIMGYNECFEPLTSNMYQRRVLSGEFQVVNPYL 645
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W +K +I +GS+Q +P IP+ELK +YKTVWEI QK +++MA DR Y
Sbjct: 646 LRDLVDLGVWDESMKQHLITANGSIQGLPNIPDELKELYKTVWEISQKKILEMAADRSIY 705
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID S SLN+ + P GK+TS+HF+ W +GLKTGMYYLR++AA+ AI+FT+D
Sbjct: 706 IDQSHSLNLFLQAPTMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQ------- 758
Query: 781 KVTDDDDAKMAQMVCSLTN 799
KV D + A MV L N
Sbjct: 759 KVAD----RAATMVADLAN 773
>gi|403218291|emb|CCK72782.1| hypothetical protein KNAG_0L01620 [Kazachstania naganishii CBS
8797]
Length = 904
Score = 1073 bits (2775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/775 (62%), Positives = 624/775 (80%), Gaps = 15/775 (1%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG++E V FDKITAR+ +L YGL + D V V+Q++ +GVY+GVTTS+LD LA
Sbjct: 1 MYVIKRDGRKEPVKFDKITARISRLCYGLDPQRIDAVKVTQRIISGVYEGVTTSELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AET A MTT HPDYA+LAAR+ +SNLHK T K FS+ + D++++ N +G AP+I+D+V
Sbjct: 61 AETCAYMTTVHPDYATLAARVAISNLHKQTTKQFSQVVADLHDYINPATGKHAPMISDEV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+DI+MKN ++S I+YDRDF ++YFGFKTLERSYLL++ G+V ERPQH++MRVA+GIH
Sbjct: 121 FDIVMKNKDAINSAIVYDRDFQFNYFGFKTLERSYLLRINGQVAERPQHLIMRVALGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+D++S +TY++MS R+F HASPTLFNAGTP+ Q+SSCFLV MKDDSIEGIYDTLKECA+
Sbjct: 181 NDLESVFETYNLMSLRYFLHASPTLFNAGTPKPQMSSCFLVAMKDDSIEGIYDTLKECAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+F+D+RKNHGKEE RARDLF ALW+PDLFM+RV++N W+LF P+ APGL+
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEANEDWTLFSPSSAPGLS 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LYTKYE+EG+ K ++AQ LW+ IL++Q ETGTP+M++KD CN+KSNQ+NL
Sbjct: 361 DIYGDEFEALYTKYEREGRG-KTIKAQKLWYSILEAQTETGTPFMIYKDACNQKSNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLC E+++Y+ P ETAVCNLAS+ALP ++ S + +
Sbjct: 420 GTIKSSNLCCEIVEYSDPNETAVCNLASVALPAFIET--------------SEDGTSSTY 465
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+F+KL E+ ++T NLNK+ID NYYPV ARRSN+RHRPI +GVQGLADTF+LL +PF+S
Sbjct: 466 NFKKLHEIAKVITRNLNKVIDRNYYPVPEARRSNMRHRPIALGVQGLADTFMLLRLPFES 525
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+ LN+ IFETIY+ +L S E+A ++G YET+ SP ++G+LQ DMW P WDW
Sbjct: 526 PEARLLNEQIFETIYHASLEASCELAQKDGTYETFKTSPSAQGVLQMDMWNAKPYGMWDW 585
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LRD I K+G+RNSL +APMPTASTSQILG NECFEP TSN+Y RRVLSGEF VVN +L
Sbjct: 586 DTLRDDIVKHGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYQRRVLSGEFQVVNPYL 645
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W+ +K +I +GS+Q +P IP+ELK +YKTVWEI QK +++MA DR Y
Sbjct: 646 LRDLVDLGIWNESMKQHLITANGSIQSLPNIPQELKDLYKTVWEISQKQIINMAADRSIY 705
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
ID S S+N+ + P GK+TS+HF+ W +GLKTGMYYLR++AA+ AI+FT+D +V
Sbjct: 706 IDQSHSMNLFLQAPTMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQNV 760
>gi|85817070|gb|EAQ38254.1| ribonucleoside-diphosphate reductase large chain [Dokdonia
donghaensis MED134]
Length = 874
Score = 1073 bits (2775), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/783 (63%), Positives = 626/783 (79%), Gaps = 25/783 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDG+QE V FDKITAR+KKL Y LS + DPV +S +V G+Y GVTTS+LD LA
Sbjct: 1 MYVVKRDGRQEPVMFDKITARVKKLCYELS-DFVDPVKISMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA+MTT+HPDYA LAARI VSNLHKNTKKSFSE + D+Y + N R+G KAP++AD+V
Sbjct: 60 AETAASMTTSHPDYAKLAARISVSNLHKNTKKSFSEVMTDLYQYVNPRTGKKAPMVADEV 119
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y +IM N LDS IIY+RDF YDYFGFKTLERSYLLK+ G++ ERPQHMLMRV++GIH
Sbjct: 120 YKVIMDNKDELDSTIIYNRDFGYDYFGFKTLERSYLLKINGQIAERPQHMLMRVSIGIHL 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+D+++A +TY +MS+++FTHA+PTLFN+GTP+ Q+SSCFL+ MKDDSIEGIYDTLK+ A
Sbjct: 180 NDLEAAKETYMLMSKKYFTHATPTLFNSGTPKPQMSSCFLLTMKDDSIEGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HNIRA G+YI GTNGTSNGIVPML+VFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNIRAKGAYIGGTNGTSNGIVPMLKVFNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWHADIF+FLDL+KNHG EE RARDLFYA+W+ DLFM+RVQ +G W+L CPNE P L
Sbjct: 300 MEPWHADIFDFLDLKKNHGAEEMRARDLFYAMWISDLFMKRVQEDGKWTLMCPNECPDLF 359
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ G EFE LYTKYE+E + ++ ++A+ LW +I++SQIETGTPYML+KD N+KSNQ+NL
Sbjct: 360 NVHGEEFEALYTKYEQEERGRRTIKARELWEKIMESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++YTS E AVCNLASIALP +V KN F
Sbjct: 420 GTIRSSNLCTEILEYTSEDEVAVCNLASIALPMFV--------------------KNGAF 459
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D ++L +T T+NLNK+ID NYYPV A SN+RHRPIG+GVQGLADTFI L +PF S
Sbjct: 460 DHQELYNITVRATKNLNKVIDRNYYPVIEAENSNMRHRPIGLGVQGLADTFIKLRLPFTS 519
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP---SDR 597
EA++LN++IFET+Y+ A+ S ++A EGPY+++ GSP+S+G Q ++W + S R
Sbjct: 520 DEAKKLNQEIFETLYFAAVTASKDMAKVEGPYQSFEGSPISQGEFQYNLWNIKDEELSGR 579
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR + ++GVRNSLLVAPMPTASTSQILGNNE FEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WDWASLRKEVMEHGVRNSLLVAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
KHLL DL + LW+ +K I+ +GS+Q I IP +LK +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLEDLVALNLWNDDLKAAIMRANGSIQGIDVIPADLKELYKTVWEMSMKDIIDMSRQR 699
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
G +ID SQSLN+ M+ NF KLTS+HF+AW GLKTGMYYLR+++A DA KFT+ ++ K
Sbjct: 700 GYFIDQSQSLNLFMEGANFAKLTSMHFYAWQSGLKTGMYYLRTKSAVDAKKFTL-SAKKK 758
Query: 778 ENP 780
E P
Sbjct: 759 EAP 761
>gi|379729067|ref|YP_005321263.1| ribonucleoside-diphosphate reductase subunit alpha [Saprospira
grandis str. Lewin]
gi|378574678|gb|AFC23679.1| ribonucleoside-diphosphate reductase, alpha subunit [Saprospira
grandis str. Lewin]
Length = 803
Score = 1073 bits (2774), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/822 (59%), Positives = 636/822 (77%), Gaps = 33/822 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V KR+G++E V FDKI R+ L GL + D + +S+KV G+Y GV+T LD+LA
Sbjct: 1 MQVTKRNGRKEDVSFDKIMRRIYYLCDGLDNRYIDVIEISKKVILGLYDGVSTEVLDKLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA+M T HPDYA LAARI VS+LHK + SF+ET++ ++ + + ++G A +IADD
Sbjct: 61 AETAASMATEHPDYAILAARISVSDLHKGSSNSFTETMRRLHQYIDPKTGENAQMIADDF 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
++ K++ +LD+ I+++RD+DYD+FGFKTLERSYL+KV GK++ERPQ+M+MR A+GIH
Sbjct: 121 MALVEKHSEQLDAAIVHERDYDYDFFGFKTLERSYLMKVNGKIIERPQYMIMRTALGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
++I++A++TY +MS+RWFTHA+PTLFN+GTPR QLSSCFL+ M DDSI GI++TL CA
Sbjct: 181 ENIEAALQTYKLMSERWFTHATPTLFNSGTPRPQLSSCFLLSMTDDSIPGIFETLSRCAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HNIRA GSYI+GT G SNGIVPMLRV+NDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISQSAGGIGLSIHNIRAKGSYIKGTGGNSNGIVPMLRVYNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+FEFLDL+KNHGKEE RARDLFYALW+PDLFM+RV+ + W+L CPNE PGL
Sbjct: 301 LEPWHADVFEFLDLKKNHGKEEQRARDLFYALWIPDLFMQRVEQDAEWTLMCPNECPGLY 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE+ Y +E EGK ++ ++A+ LW +IL+SQIETGTPYML+KD N+KSNQ+NL
Sbjct: 361 DSYGEEFEKRYLAFEAEGKGRQTIKARELWMKILESQIETGTPYMLYKDHANRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G I+SSNLCTE+++Y+SP E AVCNLASIAL ++V E G +
Sbjct: 421 GVIRSSNLCTEIMEYSSPDEVAVCNLASIALSKFVTEDG-------------------QY 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF++L EVT IVT NLNK+ID+NYYP++ A+ SN+RHRP+GIGVQGLAD F+++ +PF+S
Sbjct: 462 DFQRLYEVTRIVTRNLNKVIDINYYPIQEAKNSNMRHRPVGIGVQGLADAFLMMRLPFES 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
A+QLN+DIFETIY+ A+ S ++A EGPY TY GSP+S+G Q D+W V PSDRWDW
Sbjct: 522 EAARQLNRDIFETIYFAAMSESCQMAKEEGPYSTYEGSPISQGKFQFDLWDVTPSDRWDW 581
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I +GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRR LSGE+VVVNKHL
Sbjct: 582 EALRQEILAHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRTLSGEYVVVNKHL 641
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL E G W+ +K +I +GSVQ I +P+E+K +YKT +EIKQ+ ++DM+ DRG +
Sbjct: 642 LKDLIERGYWTQELKEMLIAANGSVQNIEGLPQEIKELYKTAYEIKQRAIIDMSADRGAF 701
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE-- 778
I SQSLN+ ++ PNF KLTS+HFHAW RGLKTGMYYLRS+AA D IKFT+ ++
Sbjct: 702 ICQSQSLNLFVESPNFAKLTSMHFHAWKRGLKTGMYYLRSKAAVDPIKFTLSAKYQQKFV 761
Query: 779 ------NPKVTDDDDAKMAQ------MVCSLTNREECMACGS 808
N + A++ + + CS+ N ++C+ CGS
Sbjct: 762 GQNGGSNQALAGRTAAQIEEANSQEGVACSIDNPDDCLMCGS 803
>gi|47222551|emb|CAG02916.1| unnamed protein product [Tetraodon nigroviridis]
Length = 898
Score = 1072 bits (2773), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 535/917 (58%), Positives = 656/917 (71%), Gaps = 134/917 (14%)
Query: 7 DGKQEAVHFDKITARLKKLSYGLSIEHCDPV----------------------------- 37
DG+QEAV FDKIT+R++KL YGL+ E DPV
Sbjct: 1 DGRQEAVSFDKITSRVQKLCYGLNSEFVDPVSTNRQCGPVGQTGPLCVLVPVTRLLWLCQ 60
Query: 38 -LVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSE 96
++ KV G+Y GVTT++LD LAAETAA +TT HPDYA LAARI VSNLHK TKK FS+
Sbjct: 61 AQITLKVIQGLYSGVTTAELDTLAAETAATLTTKHPDYAILAARIAVSNLHKETKKVFSD 120
Query: 97 TIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYL 156
++D+YN+ N + L +P+I+ + II +N ARL+S IIYDRDF Y++FGFKTLERSYL
Sbjct: 121 VMEDLYNYVNPLNKLHSPMISKETLHIIRENKARLNSAIIYDRDFSYNFFGFKTLERSYL 180
Query: 157 LKVQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLS 216
LK+ GKV ERPQHMLMRVAVGIH+ D+++AI+TY+++S+RWFTHASPTLFNAGT R+QLS
Sbjct: 181 LKINGKVAERPQHMLMRVAVGIHQADMEAAIETYNLLSERWFTHASPTLFNAGTNRSQLS 240
Query: 217 SCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPML 276
SCFL+ MKDDSIEGIYDTLK+CA++SKSAGGIG++V IRATGSYI GTNG SNG+VPML
Sbjct: 241 SCFLLTMKDDSIEGIYDTLKQCALVSKSAGGIGLAVSCIRATGSYIAGTNGKSNGLVPML 300
Query: 277 RVFNDTARYVDQGG----------------------------GKRKGAFAVYLEPWHADI 308
RV+N+TARYVDQGG G+R GAFAVYLEPWH+D+
Sbjct: 301 RVYNNTARYVDQGGNKVRMKVGEQTASRLRNIRDVIQVWLFLGQRPGAFAVYLEPWHSDV 360
Query: 309 FEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFE 368
F+FL+L+KN GKEE RARDLF+ALW+PDLFM+RV+SN WSL CP+E PGL DCWG EFE
Sbjct: 361 FDFLELKKNTGKEEQRARDLFFALWIPDLFMKRVESNQDWSLMCPSECPGLTDCWGEEFE 420
Query: 369 RLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNL 428
LYT+YEKEG+AK+VV+AQ LW+ I++SQ ETGTPYML+KD CN+KSNQQNLGTI+ SNL
Sbjct: 421 ELYTRYEKEGRAKRVVKAQQLWYAIIESQTETGTPYMLYKDACNRKSNQQNLGTIRCSNL 480
Query: 429 CTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEV 488
CTE+++YTS E AVCNLASIAL YV + R +DF KLA V
Sbjct: 481 CTEIVEYTSKDEVAVCNLASIALNMYV-------------------TPQRTYDFHKLASV 521
Query: 489 TGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNK 548
T + +NLNKIID+NYYPV A+RSNLRHRPIGIGVQGLAD FIL+ P++S EAQ LN
Sbjct: 522 TKTIVKNLNKIIDINYYPVPEAKRSNLRHRPIGIGVQGLADAFILMRHPYESPEAQLLNT 581
Query: 549 DIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMIS 608
IFETIY+ AL S E+AA GPY+TY GSPVS+G+LQ DMWG P+D WDW L++ I+
Sbjct: 582 QIFETIYHAALEASCELAAEFGPYQTYAGSPVSRGVLQYDMWGKTPTDLWDWTALKEKIA 641
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVV------------- 655
K+GVRNSLL+APMPTAST+QILGNNE FE YTSNIY+RRVLSGEF V
Sbjct: 642 KHGVRNSLLLAPMPTASTAQILGNNESFEAYTSNIYTRRVLSGEFQVCTRAFRPSLTAAG 701
Query: 656 ------------VNKHLLHDLTEMGLWSPIIKNKIIYDDGSV------------------ 685
VN HLL DLTE GLWS +KN++I +GS+
Sbjct: 702 KAERKIWPRLQIVNPHLLKDLTERGLWSDGMKNQLIAHNGSIQVERRICCISSTISLWQK 761
Query: 686 -----------QKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQP 734
Q IP+IP++LK +YKTVWEI QKT++ MA DRG +ID SQSLNIH+ +P
Sbjct: 762 PIFYKYFFNGQQNIPEIPDDLKQLYKTVWEISQKTVLKMAADRGAFIDQSQSLNIHIAEP 821
Query: 735 NFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAK---MA 791
N+GKLTS+HF+ W GLKTGMYYLR++ AA+ I+FT++ LKE ++++K A
Sbjct: 822 NYGKLTSMHFYGWKLGLKTGMYYLRTKPAANPIQFTLNKETLKEAQAARSEEESKERNAA 881
Query: 792 QMVCSLTNREECMACGS 808
+VCSL N++ECM CGS
Sbjct: 882 AVVCSLANKDECMMCGS 898
>gi|323337188|gb|EGA78442.1| Rnr3p [Saccharomyces cerevisiae Vin13]
Length = 885
Score = 1072 bits (2771), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/775 (62%), Positives = 617/775 (79%), Gaps = 15/775 (1%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG++E V FDKIT+R+ +LSYGL D V V+Q++ +GVY GVTT +LD LA
Sbjct: 17 MYVIKRDGRKEPVQFDKITSRITRLSYGLDPNRIDAVKVTQRIISGVYSGVTTVELDNLA 76
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AET A MTT HPDYA+LAARI +SNLHK T K FS+ I+D+++ N +G AP+I+D++
Sbjct: 77 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVIEDLHDWINPATGKHAPMISDEI 136
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+I+M+N L+S I+YDRDF Y YFGFKTLERSYLL++ G+V ERPQH++MRVA+GIH
Sbjct: 137 YNIVMENKDTLNSAIVYDRDFQYTYFGFKTLERSYLLRLNGEVAERPQHLVMRVALGIHG 196
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI+S +KTY++MS R+FTHASPTLFNAGTP Q+SSCFL+ MKDDSIEGIYDTLKECA+
Sbjct: 197 SDIESVLKTYNLMSLRYFTHASPTLFNAGTPHPQMSSCFLIAMKDDSIEGIYDTLKECAM 256
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGG+G+ ++NIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA++
Sbjct: 257 ISKTAGGVGLHINNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALF 316
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+F+D+RK HGKEE RARDLF ALW+PDLFM+RVQ +G W+LF P+ APGL
Sbjct: 317 LEPWHADIFDFVDIRKTHGKEEIRARDLFPALWIPDLFMKRVQEDGPWTLFSPSAAPGLD 376
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG EFE LYT+YE+EG+ K ++AQ LW+ IL++Q ETGTP+M++KD CN+K+NQQNL
Sbjct: 377 DVWGDEFEELYTRYEREGRG-KTIKAQKLWYAILQAQTETGTPFMVYKDACNRKTNQQNL 435
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLC E+++Y+SP ETAVCNLASIALP +V S K +
Sbjct: 436 GTIKSSNLCCEIVEYSSPDETAVCNLASIALPAFVEV--------------SEDGKTASY 481
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+FE+L E+ ++T NLN++ID NYYPV AR SN++HRPI +GVQGLADT+++L +PF+S
Sbjct: 482 NFERLHEIAKVITHNLNRVIDRNYYPVPEARNSNMKHRPIALGVQGLADTYMMLRLPFES 541
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
AQ LNK IFETIY+ L S E+A +EG Y T+ GSP SKGILQ DMW P WDW
Sbjct: 542 EXAQTLNKQIFETIYHATLEASCELAQKEGKYSTFEGSPASKGILQFDMWNAKPFGMWDW 601
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I K+G+RNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +L
Sbjct: 602 ETLRKDIVKHGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 661
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W +K +I +GS+Q +P +P+ELK +YKTVWEI QKT+++MA DR Y
Sbjct: 662 LRDLVDLGIWDDSMKQYLITQNGSIQGLPNVPQELKELYKTVWEISQKTIINMAADRAIY 721
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
ID S SLN+ + P+ GK+TS+HF+ W +GLKTGMYYLR++AA+ AI+FT+D V
Sbjct: 722 IDQSHSLNLFLQAPSMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQEV 776
>gi|365765120|gb|EHN06634.1| Rnr3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 885
Score = 1072 bits (2771), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/775 (62%), Positives = 617/775 (79%), Gaps = 15/775 (1%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG++E V FDKIT+R+ +LSYGL D V V+Q++ +GVY GVTT +LD LA
Sbjct: 17 MYVIKRDGRKEPVQFDKITSRITRLSYGLDPNRIDAVKVTQRIISGVYSGVTTVELDNLA 76
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AET A MTT HPDYA+LAARI +SNLHK T K FS+ I+D+++ N +G AP+I+D++
Sbjct: 77 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVIEDLHDWINPATGKHAPMISDEI 136
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+I+M+N L+S I+YDRDF Y YFGFKTLERSYLL++ G+V ERPQH++MRVA+GIH
Sbjct: 137 YNIVMENKDTLNSAIVYDRDFQYTYFGFKTLERSYLLRLNGEVAERPQHLVMRVALGIHG 196
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI+S +KTY++MS R+FTHASPTLFNAGTP Q+SSCFL+ MKDDSIEGIYDTLKECA+
Sbjct: 197 SDIESVLKTYNLMSLRYFTHASPTLFNAGTPHPQMSSCFLIAMKDDSIEGIYDTLKECAM 256
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGG+G+ ++NIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA++
Sbjct: 257 ISKTAGGVGLHINNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALF 316
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+F+D+RK HGKEE RARDLF ALW+PDLFM+RVQ +G W+LF P+ APGL
Sbjct: 317 LEPWHADIFDFVDIRKTHGKEEIRARDLFPALWIPDLFMKRVQEDGPWTLFSPSAAPGLD 376
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG EFE LYT+YE+EG+ K ++AQ LW+ IL++Q ETGTP+M++KD CN+K+NQQNL
Sbjct: 377 DVWGDEFEELYTRYEREGRG-KTIKAQKLWYAILQAQTETGTPFMVYKDACNRKTNQQNL 435
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLC E+++Y+SP ETAVCNLASIALP +V S K +
Sbjct: 436 GTIKSSNLCCEIVEYSSPDETAVCNLASIALPAFVEV--------------SEDGKTASY 481
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+FE+L E+ ++T NLN++ID NYYPV AR SN++HRPI +GVQGLADT+++L +PF+S
Sbjct: 482 NFERLHEIAKVITHNLNRVIDRNYYPVPEARNSNMKHRPIALGVQGLADTYMMLRLPFES 541
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
AQ LNK IFETIY+ L S E+A +EG Y T+ GSP SKGILQ DMW P WDW
Sbjct: 542 EXAQTLNKQIFETIYHATLEASCELAQKEGKYSTFEGSPASKGILQFDMWNAKPFGMWDW 601
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I K+G+RNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +L
Sbjct: 602 ETLRKDIVKHGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 661
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W +K +I +GS+Q +P +P+ELK +YKTVWEI QKT+++MA DR Y
Sbjct: 662 LRDLVDLGIWDDSMKQYLITQNGSIQGLPNVPQELKELYKTVWEISQKTIINMAADRAIY 721
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
ID S SLN+ + P+ GK+TS+HF+ W +GLKTGMYYLR++AA+ AI+FT+D V
Sbjct: 722 IDQSHSLNLFLQAPSMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQEV 776
>gi|424842990|ref|ZP_18267615.1| ribonucleoside-diphosphate reductase, alpha subunit [Saprospira
grandis DSM 2844]
gi|395321188|gb|EJF54109.1| ribonucleoside-diphosphate reductase, alpha subunit [Saprospira
grandis DSM 2844]
Length = 807
Score = 1071 bits (2770), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/822 (59%), Positives = 636/822 (77%), Gaps = 33/822 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V KR+G++E V FDKI R+ L GL + D + +S+KV G+Y GV+T LD+LA
Sbjct: 5 MQVTKRNGRKEDVSFDKIMRRIYYLCDGLDNRYIDVIEISKKVILGLYDGVSTEVLDKLA 64
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA+M T HPDYA LAARI VS+LHK + SF+ET++ ++ + + ++G A +IADD
Sbjct: 65 AETAASMATEHPDYAILAARISVSDLHKGSSNSFTETMRRLHQYIDPKTGENAQMIADDF 124
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
++ K++ +LD+ I+++RD+DYD+FGFKTLERSYL+KV GK++ERPQ+M+MR A+GIH
Sbjct: 125 MALVEKHSEQLDAAIVHERDYDYDFFGFKTLERSYLMKVNGKIIERPQYMIMRTALGIHG 184
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
++I++A++TY +MS+RWFTHA+PTLFN+GTPR QLSSCFL+ + DDSI GI++TL CA
Sbjct: 185 ENIEAALQTYKLMSERWFTHATPTLFNSGTPRPQLSSCFLLSITDDSIPGIFETLSRCAK 244
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HNIRA GSYI+GT G SNGIVPMLRV+NDTARYVDQGGGKRKGAFA+Y
Sbjct: 245 ISQSAGGIGLSIHNIRAKGSYIKGTGGNSNGIVPMLRVYNDTARYVDQGGGKRKGAFAIY 304
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+FEFLDL+KNHGKEE RARDLFYALW+PDLFM+RV+ + W+L CPNE PGL
Sbjct: 305 LEPWHADVFEFLDLKKNHGKEEQRARDLFYALWIPDLFMQRVEQDAEWTLMCPNECPGLY 364
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE+ Y +E EGK ++ ++A+ LW +IL+SQIETGTPYML+KD N+KSNQ+NL
Sbjct: 365 DSYGEEFEQRYLAFEAEGKGRQTIKARELWMKILESQIETGTPYMLYKDHANRKSNQKNL 424
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G I+SSNLCTE+++Y+SP E AVCNLASIAL ++V E G +
Sbjct: 425 GVIRSSNLCTEIMEYSSPDEVAVCNLASIALSKFVTEDG-------------------QY 465
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF++L EVT IVT NLNK+ID+NYYP++ A+ SN+RHRP+GIGVQGLAD F+LL +PF+S
Sbjct: 466 DFQRLYEVTRIVTRNLNKVIDINYYPIQEAKNSNMRHRPVGIGVQGLADAFLLLRLPFES 525
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+QLN+DIFETIY+ A+ S ++A EG Y +Y GSP+S+G Q D+W V PSDRWDW
Sbjct: 526 EEARQLNRDIFETIYFAAMSESCQMAKEEGAYSSYEGSPISQGKFQFDLWDVTPSDRWDW 585
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR + +GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRR LSGE+VVVNKHL
Sbjct: 586 EALRQEVLAHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRTLSGEYVVVNKHL 645
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL E G W+ +K +I +GSVQ I +P+E+K +YKT +EIKQ+ ++DM+ DRG +
Sbjct: 646 LKDLIERGYWTQELKEMLIAANGSVQNIEGLPQEIKELYKTAYEIKQRAIIDMSADRGAF 705
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE-- 778
I SQSLN+ ++ PNF KLTS+HFHAW RGLKTGMYYLRS+AA D IKFT+ ++
Sbjct: 706 ICQSQSLNLFVESPNFAKLTSMHFHAWKRGLKTGMYYLRSKAAVDPIKFTLSAKYQQKFV 765
Query: 779 ------NPKVTDDDDAKMAQ------MVCSLTNREECMACGS 808
N + A++ + + CS+ N ++C+ CGS
Sbjct: 766 GQNGGSNQALAGRTAAQIEEANSQEGLACSIDNPDDCLMCGS 807
>gi|190406283|gb|EDV09550.1| ribonucleotide reductase [Saccharomyces cerevisiae RM11-1a]
gi|256269776|gb|EEU05042.1| Rnr3p [Saccharomyces cerevisiae JAY291]
Length = 869
Score = 1071 bits (2770), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/775 (62%), Positives = 617/775 (79%), Gaps = 15/775 (1%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG++E V FDKIT+R+ +LSYGL D V V+Q++ +GVY GVTT +LD LA
Sbjct: 1 MYVIKRDGRKEPVQFDKITSRITRLSYGLDPNRIDAVKVTQRIISGVYSGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AET A MTT HPDYA+LAARI +SNLHK T K FS+ I+D+++ N +G AP+I+D++
Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVIEDLHDWINPATGKHAPMISDEI 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+I+M+N L+S I+YDRDF Y YFGFKTLERSYLL++ G+V ERPQH++MRVA+GIH
Sbjct: 121 YNIVMENKDTLNSAIVYDRDFQYTYFGFKTLERSYLLRLNGEVAERPQHLVMRVALGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI+S +KTY++MS R+FTHASPTLFNAGTP Q+SSCFL+ MKDDSIEGIYDTLKECA+
Sbjct: 181 SDIESVLKTYNLMSLRYFTHASPTLFNAGTPHPQMSSCFLIAMKDDSIEGIYDTLKECAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGG+G+ ++NIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA++
Sbjct: 241 ISKTAGGVGLHINNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALF 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+F+D+RK HGKEE RARDLF ALW+PDLFM+RVQ +G W+LF P+ APGL
Sbjct: 301 LEPWHADIFDFVDIRKTHGKEEIRARDLFPALWIPDLFMKRVQEDGPWTLFSPSAAPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG EFE LYT+YE+EG+ K ++AQ LW+ IL++Q ETGTP+M++KD CN+K+NQQNL
Sbjct: 361 DVWGDEFEELYTRYEREGRG-KTIKAQKLWYAILQAQTETGTPFMVYKDACNRKTNQQNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLC E+++Y+SP ETAVCNLASIALP +V S K +
Sbjct: 420 GTIKSSNLCCEIVEYSSPDETAVCNLASIALPAFVEV--------------SEDGKTASY 465
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+FE+L E+ ++T NLN++ID NYYPV AR SN++HRPI +GVQGLADT+++L +PF+S
Sbjct: 466 NFERLHEIAKVITHNLNRVIDRNYYPVPEARNSNMKHRPIALGVQGLADTYMMLRLPFES 525
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
AQ LNK IFETIY+ L S E+A +EG Y T+ GSP SKGILQ DMW P WDW
Sbjct: 526 EVAQTLNKQIFETIYHATLEASCELAQKEGKYSTFEGSPASKGILQFDMWNAKPFGMWDW 585
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I K+G+RNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +L
Sbjct: 586 ETLRKDIVKHGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W +K +I +GS+Q +P +P+ELK +YKTVWEI QKT+++MA DR Y
Sbjct: 646 LRDLVDLGIWDDSMKQYLITQNGSIQGLPNVPQELKELYKTVWEISQKTIINMAADRAIY 705
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
ID S SLN+ + P+ GK+TS+HF+ W +GLKTGMYYLR++AA+ AI+FT+D V
Sbjct: 706 IDQSHSLNLFLQAPSMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQEV 760
>gi|47225021|emb|CAF97436.1| unnamed protein product [Tetraodon nigroviridis]
Length = 846
Score = 1070 bits (2768), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 498/747 (66%), Positives = 604/747 (80%), Gaps = 19/747 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+VVKRDG+QE V FDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVVKRDGRQERVMFDKITSRIQKLCYGLNADFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE +A +TT HPDYA LAARI VSNLHK TKK FSE ++D+YN+ N + +P+++ +
Sbjct: 61 AEISATLTTKHPDYAILAARIAVSNLHKETKKVFSEVMEDLYNYVNPLNRCHSPMVSKET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI+++N RL+S IIYDRDF Y++FGFKTLERSYLLK+ GKV ERPQHMLMRV+VGIH+
Sbjct: 121 LDIVLQNRDRLNSAIIYDRDFSYNFFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+AI+TY+++S++WFTHASPTLFNAGT R QLSSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 NDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLAMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGHSNGLVPMLRVYNNTARYVDQGGNKRPGAFAMY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH D+F+FL+L+KN GKEE RARDLFYALW+PDLFM+RV+SN WSL CP+E PGL
Sbjct: 301 LEPWHFDVFDFLELKKNTGKEEQRARDLFYALWIPDLFMKRVESNQDWSLMCPDECPGLN 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+CWG EFE+LYT YEKEG+ K+VV+AQ +W I++SQ ETGTPYML+KD CN+KSNQQNL
Sbjct: 361 ECWGEEFEKLYTSYEKEGRVKRVVKAQQVWHAIIESQTETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+++YTS E AVCNLASIAL YV + F
Sbjct: 421 GTIKSSNLCTEIVEYTSSDEVAVCNLASIALNMYV-------------------TPECTF 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KLA VT +V NLNKIID+NYYPV A RSN RHRPIGIGVQGLAD FIL+ PF+S
Sbjct: 462 DFHKLAAVTKVVVRNLNKIIDINYYPVPEAERSNRRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LN IFETIYY AL S ++AA GPYE+Y GSPVSKG+LQ DMWG P++ WDW
Sbjct: 522 PEAQLLNTQIFETIYYAALEASCQLAAELGPYESYEGSPVSKGVLQYDMWGKTPTELWDW 581
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+++GVRNSLL+APMPTAST+QILGNNE E YTSNIY+RRVLSGEF +VN HL
Sbjct: 582 QQLKERIARHGVRNSLLLAPMPTASTAQILGNNESIEAYTSNIYTRRVLSGEFQIVNPHL 641
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE GLW+ +KN++I +GSVQ I IP ++K +YKTVWEI QKT++ MA DRG +
Sbjct: 642 LKDLTERGLWNEDMKNQLIAHNGSVQNIDGIPNDVKQLYKTVWEISQKTVIKMAADRGAF 701
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAW 747
ID SQS+NIH+ +PN+GKLTS+HF+ W
Sbjct: 702 IDQSQSMNIHIAEPNYGKLTSMHFYGW 728
>gi|340715220|ref|XP_003396116.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Bombus terrestris]
Length = 821
Score = 1070 bits (2767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 522/833 (62%), Positives = 637/833 (76%), Gaps = 43/833 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG++E VHFDKIT+R++KL Y L +++ DP ++ +V +G+Y GVTT +LD LA
Sbjct: 7 MYVIKRDGRKEDVHFDKITSRIQKLCYNLDMDYVDPSAITFRVISGLYSGVTTVELDNLA 66
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA LAARI +SNLHK TKKSFSE I +YN + P+I +
Sbjct: 67 AETAATMTTKHPDYAILAARIAISNLHKETKKSFSEVIHSLYNVKEHYTNEVRPVINEKY 126
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+II NA +L+S IIYDRDF Y+YFGFKTLERSYLLK+QGKVVERPQHMLMRVAV IH
Sbjct: 127 YNIIQNNANKLNSAIIYDRDFSYNYFGFKTLERSYLLKIQGKVVERPQHMLMRVAVAIHG 186
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID AI+TY+ +S+R+FTHASP+LF A T + Q+SSCFL+ M DDSI+GIYDTLK CA+
Sbjct: 187 EDIDKAIETYNFLSERYFTHASPSLFFACTRQQQMSSCFLLTMSDDSIDGIYDTLKRCAL 246
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++VH IRA G+ I GT G SNG++PMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 247 ISKSAGGIGLNVHCIRARGTPIAGTLGVSNGLIPMLRVYNNTARYVDQGGNKRPGAFAIY 306
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIFEFLDL+KN GKEE+RAR+LFYALW+PDLFM+RV NG+WSL CP+E+PGL
Sbjct: 307 LEPWHADIFEFLDLKKNIGKEENRARELFYALWIPDLFMKRVLDNGVWSLMCPHESPGLP 366
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG EFE LYT+YE E + K+ +QA++LW IL SQ+ETGTPYML+KD CN+KSN QNL
Sbjct: 367 DVWGDEFEALYTRYETEKRYKRQIQARDLWTAILISQVETGTPYMLYKDHCNRKSNHQNL 426
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE++QY+SP E AVCNLASIA+ +V S N+ F
Sbjct: 427 GTIKSSNLCTEIVQYSSPDEIAVCNLASIAVNMFV------------------NSSNQTF 468
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DFEKL +VT IVT NL+KIIDVNYYPV A+ SN +HRPIGIG+QGLAD F+L+ PF+S
Sbjct: 469 DFEKLRKVTKIVTCNLDKIIDVNYYPVPEAKTSNFKHRPIGIGIQGLADAFLLMRYPFES 528
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ+LN IFET+YY AL S E+AA +G YETY GSPVSKGILQ DMW V P+D W+W
Sbjct: 529 EEAQKLNIQIFETLYYGALEASCELAAEKGTYETYEGSPVSKGILQYDMWNVTPTDLWNW 588
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K+GVRNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 589 TILKEKIAKHGVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYARRVLSGEFQVVNPHL 648
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE LW +KN+II ++GSVQ I +IP +LK +YKTVWEI QK ++ MA DRG +
Sbjct: 649 LRDLTERDLWDENMKNEIIANNGSVQNIERIPNDLKMLYKTVWEIPQKIILKMAADRGAF 708
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE-- 778
ID SQS+N+HM +P KLTS+HF+ W GLKTGMYYLR++ A +A++FTVD S L+
Sbjct: 709 IDQSQSMNVHMAKPTAEKLTSMHFYGWKMGLKTGMYYLRTKPAVNALQFTVDKSKLQNTI 768
Query: 779 --------NPKVTDDDDAKM---------------AQMVCSLTNREECMACGS 808
N + +D++ A CS N + CMACGS
Sbjct: 769 STTSNQSVNSECNNDEELNSTENKWLQNQSSENIEAVFACSRENGDACMACGS 821
>gi|89890042|ref|ZP_01201553.1| ribonucleoside-diphosphate reductase large chain [Flavobacteria
bacterium BBFL7]
gi|89518315|gb|EAS20971.1| ribonucleoside-diphosphate reductase large chain [Flavobacteria
bacterium BBFL7]
Length = 828
Score = 1070 bits (2767), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/774 (65%), Positives = 625/774 (80%), Gaps = 24/774 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+VVKRDG +E V FDKITAR++KL YGLS H DPV V+ +V G+Y GVTTS+LD LA
Sbjct: 1 MFVVKRDGHKEPVMFDKITARVRKLCYGLS-NHVDPVKVAMRVIDGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA LAARI VSNLHKNTKK+F++ + D+Y + N R+ KAP+I+D+V
Sbjct: 60 AETAATMTTAHPDYARLAARISVSNLHKNTKKTFTDVVTDLYEYVNPRTEKKAPMISDEV 119
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y +I NA RL+S IIY+RDF YDYFGFKTLERSYLLK+ GK+ ERPQHMLMRV+VGIH
Sbjct: 120 YQVIQDNADRLNSAIIYNRDFGYDYFGFKTLERSYLLKINGKIAERPQHMLMRVSVGIHM 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD+D+AI+TY +MS+++FTHA+PTLFNAGTP+ Q+SSCFL+ M+DDSIEGIYDTLK+ A
Sbjct: 180 DDLDAAIETYELMSKKFFTHATPTLFNAGTPKPQMSSCFLLTMQDDSIEGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HNIRA GSYI GTNGTSNGIVPML+V+NDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNIRARGSYIGGTNGTSNGIVPMLKVYNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWHADIF+FLDL+KNHGKEE RARDLFYA+W+ DLFM+RV++N W+L CP+E P L
Sbjct: 300 MEPWHADIFDFLDLKKNHGKEEMRARDLFYAMWMSDLFMKRVEANDTWTLMCPHECPDLY 359
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ +G EFE LYTKYE+EGK +K +QA+ LW +IL+SQIETGTPYML+KD N KSNQ+NL
Sbjct: 360 NVYGDEFEALYTKYEQEGKGRKTIQARELWDKILESQIETGTPYMLYKDAANNKSNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++YTSP E AVCNLASIALP ++ K+ F
Sbjct: 420 GTIRSSNLCTEIMEYTSPDEVAVCNLASIALPMFI--------------------KDGAF 459
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D + L +VT VT NLNK+ID NYYPV AR SN+RHRP+G+G+QGLAD FI+L +PF S
Sbjct: 460 DHKALYKVTKRVTRNLNKVIDRNYYPVIEARNSNMRHRPVGLGIQGLADAFIMLRLPFTS 519
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSD---R 597
EA++LN +IFET+Y+ A S E+A EG Y T+ GSP+S+G Q +MW +N SD R
Sbjct: 520 DEAKKLNSEIFETLYFAACEASMEMAQEEGAYSTFEGSPMSQGEFQFNMWNINDSDLSGR 579
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
W+W LR + ++GVRNSLLVAPMPTASTSQILGNNE FEPYTSNIY+RR LSGEF+VVN
Sbjct: 580 WNWSDLRTKVMEHGVRNSLLVAPMPTASTSQILGNNEAFEPYTSNIYTRRTLSGEFIVVN 639
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
KHLL DL ++GLW +KN I+ ++GS+Q I IPE++K +YKTVWE+K K ++DM+ R
Sbjct: 640 KHLLKDLVDLGLWDDSLKNAIMRNNGSIQAIEGIPEDIKELYKTVWELKMKDIIDMSRQR 699
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTV 771
G +ID SQSLN+ M+ KLTS+HF+AW GLKTGMYYLR++AA DAIKFTV
Sbjct: 700 GYFIDQSQSLNLFMENVTTSKLTSMHFYAWKSGLKTGMYYLRTKAAVDAIKFTV 753
>gi|365987435|ref|XP_003670549.1| hypothetical protein NDAI_0E04890 [Naumovozyma dairenensis CBS 421]
gi|343769319|emb|CCD25306.1| hypothetical protein NDAI_0E04890 [Naumovozyma dairenensis CBS 421]
Length = 915
Score = 1070 bits (2766), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/775 (62%), Positives = 621/775 (80%), Gaps = 15/775 (1%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG++E V FDKITAR+ +L YGL D V V+Q++ +GVY+GVTT +LD LA
Sbjct: 1 MYVIKRDGRKEPVKFDKITARISRLCYGLDPARIDAVKVTQRIISGVYEGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AET A MTT HPDYA+LAAR+ +SNLHK T K FS I++++++ N +G AP+I++DV
Sbjct: 61 AETCAYMTTVHPDYATLAARLAISNLHKQTTKQFSTVIQNLHDYINPATGKHAPMISEDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y I+M N L+S I+YDRDF ++YFGFKTLERSYLL++ G+V ERPQH++MRVA+GIH
Sbjct: 121 YSIVMDNKDELNSSIVYDRDFQFNYFGFKTLERSYLLRINGQVAERPQHLIMRVALGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI +A++TY++MS R+F HASPTLFNAGTP+ Q+SSCFLV MKDDSIEGIYDTLKECA+
Sbjct: 181 RDIKAALETYNLMSLRYFIHASPTLFNAGTPKPQMSSCFLVAMKDDSIEGIYDTLKECAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+F+++RKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF P+ APGL+
Sbjct: 301 LEPWHADIFDFIEIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNGQWTLFSPSSAPGLS 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EFE LYT+YE+EG+ K ++AQ LW+ IL++Q ETGTP++L+KD CN+KSNQ+NL
Sbjct: 361 DCYGEEFEELYTRYEREGRG-KTIKAQKLWYSILEAQTETGTPFILYKDACNEKSNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G IKSSNLC E+++Y++P ETAVCNLAS+ALP ++ S K +
Sbjct: 420 GVIKSSNLCCEIVEYSAPDETAVCNLASVALPAFIET--------------SEDGKTSTY 465
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+F+KL E++ ++T NLN++ID NYYPV AR SN+RHRPI +GVQGLADT++LL MPF+S
Sbjct: 466 NFKKLHEISKVITRNLNRVIDRNYYPVPEARNSNMRHRPIALGVQGLADTYMLLRMPFES 525
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+ LNK IFETIY+ +L S E+A ++GPY + SP +KGILQ DMW P WDW
Sbjct: 526 DEAKILNKQIFETIYHASLEASCELAQKDGPYLNFEDSPSAKGILQMDMWNQKPFGMWDW 585
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+ I K G+RNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +L
Sbjct: 586 DTLRNDIRKYGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W +K II ++GS+Q +P +P+ELK +YKT+WEI QKT++DMA DR Y
Sbjct: 646 LRDLVDLGIWDDGMKQHIITENGSIQNLPNVPDELKKLYKTIWEISQKTIIDMAADRSIY 705
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
ID S S+N+ + P GKLTS+HF+ W +GLKTGMYYLR++AA+ AI+FT+D ++
Sbjct: 706 IDQSHSMNLFLRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQAI 760
>gi|118346189|ref|XP_976850.1| Ribonucleotide reductase, barrel domain containing protein
[Tetrahymena thermophila]
gi|89288340|gb|EAR86328.1| Ribonucleotide reductase, barrel domain containing protein
[Tetrahymena thermophila SB210]
Length = 2928
Score = 1069 bits (2764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/779 (62%), Positives = 614/779 (78%), Gaps = 22/779 (2%)
Query: 2 YVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAA 61
+++ R ++ + +I RL+ L++ L + L+ QKV G+Y G+ T++LDELAA
Sbjct: 2087 HIINRKNEKMNLDLIRIKERLEALTFNLDRNFVNMDLIIQKVVNGMYDGIHTTELDELAA 2146
Query: 62 ETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVY 121
ETAA MT HP Y+ AARI VSNLHK T SF ETI +YN Y ++SG +A LIA DVY
Sbjct: 2147 ETAAYMTIIHPHYSLFAARIAVSNLHKETSSSFFETISALYN-YVDKSGRQAGLIAKDVY 2205
Query: 122 DIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKD 181
+I+ +NA ++ I YDRD+ YD+FGFKTLERSYLLK+ GK+ ERPQHMLMRV++GIHK
Sbjct: 2206 EIVKENAEAIEKVINYDRDYTYDFFGFKTLERSYLLKIHGKIAERPQHMLMRVSIGIHKR 2265
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAII 241
D++SA +TY++MS++WFTHA+PTLFN+GTP+ Q+SSCFL+ MK DSIEGIYDTLK+ A+I
Sbjct: 2266 DLESAFRTYNLMSEKWFTHATPTLFNSGTPKPQMSSCFLLQMKGDSIEGIYDTLKQSALI 2325
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SKSAGGIG+SVHNIRA SYIRGTNG SNG+VPMLRVFNDTARYVDQGGGKRKG+FA+YL
Sbjct: 2326 SKSAGGIGISVHNIRARDSYIRGTNGISNGLVPMLRVFNDTARYVDQGGGKRKGSFAIYL 2385
Query: 302 EPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLAD 361
EPWH+DIFEFL L+KNHGKEE RARDLFYALW+PDLFM+RV S+G W+L CPNE PGL D
Sbjct: 2386 EPWHSDIFEFLQLKKNHGKEEQRARDLFYALWIPDLFMKRVISDGTWTLMCPNECPGLPD 2445
Query: 362 CWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG 421
WG EFE LYTKYE EGK +K + A+ LW +I+ SQIETGTPYML+KD CN+KSNQQNLG
Sbjct: 2446 VWGDEFEALYTKYENEGKGRKTINARELWQDIVDSQIETGTPYMLYKDACNRKSNQQNLG 2505
Query: 422 TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFD 481
TIKSSNLCTE+I+YTSP E AVCNLASI+L ++V+E G +D
Sbjct: 2506 TIKSSNLCTEIIEYTSPDEVAVCNLASISLVKFVKENG-------------------EYD 2546
Query: 482 FEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDST 541
++KL E++ +VT NLNK+ID NYYPV A+ SN+RHRPIGIGVQGLAD FI + + F+S
Sbjct: 2547 YQKLYEISKVVTFNLNKVIDENYYPVIEAKNSNMRHRPIGIGVQGLADAFIKMRISFESD 2606
Query: 542 EAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSD-RWDW 600
EAQ +N+ IFETIY+ A S EIA +EGPYET+ GSP SKG LQ D+W P +DW
Sbjct: 2607 EAQIVNEKIFETIYFGACEASMEIAIKEGPYETFKGSPASKGQLQFDLWNYKPHLCGYDW 2666
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
GL+ I ++G+RNSLL++PMPTASTSQILGN E FEPYTSN+Y+RRVL+GEFV +N HL
Sbjct: 2667 DGLKQKIVEHGMRNSLLISPMPTASTSQILGNCESFEPYTSNLYTRRVLAGEFVCINPHL 2726
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
+ DL E LW+P IKN+++ +GSV ++P IP+++K +YKTVWE+ QK ++++AV R +
Sbjct: 2727 VQDLIERNLWNPSIKNQLLAFNGSVSQVPDIPDDIKQLYKTVWEVSQKAIINLAVGRSPF 2786
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDT-SVLKE 778
ID SQSLNIH+ P++ K+TS+HF+AW +GLKTGMYYLRSR AAD IKFT+D S+L+E
Sbjct: 2787 IDQSQSLNIHISDPSYSKITSMHFYAWEKGLKTGMYYLRSRPAADPIKFTLDVESLLRE 2845
>gi|442750421|gb|JAA67370.1| Putative ribonucleotide reductase alpha subunit [Ixodes ricinus]
Length = 762
Score = 1069 bits (2764), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/772 (65%), Positives = 627/772 (81%), Gaps = 21/772 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+VVKRDG+++ V+FDKITAR++KL YGL+ + D +++KV G+Y+GVTT +LD LA
Sbjct: 1 MFVVKRDGRRQTVYFDKITARIQKLCYGLNQDFVDSCSIAKKVINGLYEGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA LAARI VSNLHK TKKSFSE I ++Y+ NE + L P+I +++
Sbjct: 61 AETAATMTTKHPDYALLAARIAVSNLHKETKKSFSEVISNLYHMINESNNLHTPMIDEEI 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y I+M+NA +S I+YDRDF+Y+YFGFKTLER+YLL++ GKVVERPQHMLMRV++GIH
Sbjct: 121 YKIVMENADTFNSAIVYDRDFNYNYFGFKTLERAYLLRINGKVVERPQHMLMRVSIGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+D+ + ++TY++MS++WFTHASPTLFN+GTPR QLSSCFL+ MK DSIEGIYDTLK+CA+
Sbjct: 181 NDLKNVLETYNLMSEKWFTHASPTLFNSGTPRPQLSSCFLLQMKSDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++VHNIRA GSYI G+NG S+GIVPMLRV+N+TARYVDQGG KR GA A+Y
Sbjct: 241 ISKSAGGIGLNVHNIRAAGSYIAGSNGKSSGIVPMLRVYNNTARYVDQGGNKRPGAIAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+F+FLDL+KN GKEE+RARDLFYALW+PDLFMERV+ N WSL CPN+ PGL
Sbjct: 301 LEPWHADVFDFLDLKKNTGKEENRARDLFYALWIPDLFMERVEKNETWSLMCPNDCPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G +FE+LYTKYE E + + V AQ LW+ I++SQ ETGTPYML+KD CN+KSNQ+N+
Sbjct: 361 DVYGKKFEQLYTKYESEKRYIRQVPAQKLWYAIVESQTETGTPYMLYKDACNEKSNQKNI 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YTS E AVCNLASIAL R+VR N +F
Sbjct: 421 GTIKCSNLCTEIVEYTSDKEVAVCNLASIALNRFVR--------------------NGHF 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DFE+L V+ I+T NLN+II+ N+YP+ A+ SN+RHRPIGIGVQGLADTFILL +PFDS
Sbjct: 461 DFEQLRRVSRIITVNLNRIIERNFYPIPEAKLSNMRHRPIGIGVQGLADTFILLRLPFDS 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+ LN+ IFETIYY AL S E+A GPYETY GSPVSKG+LQ DMWGV P++ WDW
Sbjct: 521 EEARLLNRQIFETIYYGALEQSCELAKNLGPYETYPGSPVSKGLLQYDMWGVKPTEMWDW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I K GVRNSLLVAPMPTAST+QILGNNE EPYT+N+Y+RRVLSGEF VVN HL
Sbjct: 581 TSLKKQIVKYGVRNSLLVAPMPTASTAQILGNNESIEPYTTNVYTRRVLSGEFQVVNYHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLT+ GLW+ +KN +I + GSVQK+ IP++LK +Y+TVWEI QK +++MA DRG +
Sbjct: 641 LKDLTDRGLWNDELKNALIANHGSVQKL-NIPDDLKHLYRTVWEIPQKHILEMAADRGAF 699
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
ID SQSLNIH+ QP + K+TS+HF W GLKTGMYYLR++ AA+AI+FTVD
Sbjct: 700 IDQSQSLNIHIAQPTYSKITSMHFFGWKLGLKTGMYYLRTKPAANAIQFTVD 751
>gi|444324020|ref|XP_004182650.1| hypothetical protein TBLA_0J01350 [Tetrapisispora blattae CBS 6284]
gi|387515698|emb|CCH63131.1| hypothetical protein TBLA_0J01350 [Tetrapisispora blattae CBS 6284]
Length = 886
Score = 1068 bits (2762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/775 (62%), Positives = 619/775 (79%), Gaps = 14/775 (1%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG++E V FDKITAR+ +L YGL H DPV V+Q++ +GVY+GVTT +LD LA
Sbjct: 1 MYVCKRDGRKEPVRFDKITARVSRLCYGLDSNHIDPVKVTQRIISGVYEGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA LAAR+ +SNLHK T K FS I+ +YN+ N + APLIA DV
Sbjct: 61 AETAAYMTTVHPDYAILAARLAISNLHKQTTKVFSNLIEQLYNYVNPSNNQPAPLIAKDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+ +M N ++S I+YDRDF ++YFG+KTLERSYLL++ G+V ERPQH++MRV +GIH
Sbjct: 121 YETVMANRDEINSAIVYDRDFQFNYFGYKTLERSYLLRMNGQVAERPQHLIMRVCLGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI +A+++Y++MS R+FTHA+PTLFN+GTPR Q+SSCFLV MK+DSIEGIYDTLKECA+
Sbjct: 181 SDIKAALESYNLMSHRYFTHATPTLFNSGTPRPQMSSCFLVAMKEDSIEGIYDTLKECAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+ +HNIR+TGSYI GTNGTSNG++PM+RV+N+TARYVDQGG KR GA A++
Sbjct: 241 ISKSAGGIGIHMHNIRSTGSYIAGTNGTSNGLIPMIRVYNNTARYVDQGGNKRPGAIAIF 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+F+D+RKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF P+EAPGL+
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVKENGDWTLFSPSEAPGLS 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LY +Y +EGK +K ++AQ LW+ IL++Q ETGTP++ +KD NKKSNQ+NL
Sbjct: 361 DVYGDEFEALYNRYVEEGKGRKTIKAQKLWYSILEAQTETGTPFICYKDAANKKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLC E+I+Y++P ETAVCNLAS+ALP ++ + G+ Y
Sbjct: 421 GTIKSSNLCCEIIEYSAPDETAVCNLASVALPAFIE-------------TAADGTTQTY- 466
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+F+KL +V ++T NLNK+ID +YYPV AR SN+RHRPI +G+QGLADT+ LL +PF+S
Sbjct: 467 NFQKLHDVCKVITRNLNKVIDRSYYPVPEARNSNMRHRPIALGIQGLADTYQLLRIPFES 526
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
A++LN IFET+Y+ +L S E+A +GPY +Y GSPVS+GILQ DMW V P+D WDW
Sbjct: 527 DRAKELNIHIFETLYHASLEASCELAEVDGPYSSYEGSPVSQGILQYDMWNVKPTDLWDW 586
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I K+GVRNSL++APMPTASTSQILG NECFEP+TSN+YSRR LSGEF VVN +L
Sbjct: 587 DSLKAKIKKHGVRNSLVLAPMPTASTSQILGYNECFEPFTSNMYSRRTLSGEFQVVNPYL 646
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W +K +I D+GS+Q +P IP+ELK +YKTVWEI QK ++D+A DR +
Sbjct: 647 LRDLVDLGVWDDAMKQHLITDNGSIQNLPNIPQELKELYKTVWEISQKKIIDLAADRSAF 706
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
ID S SLNIH+ P GKLTS+HF+ W +GLKTGMYYLR++AA+ AI+FT+D V
Sbjct: 707 IDQSHSLNIHIQAPTMGKLTSMHFYGWQKGLKTGMYYLRTQAASAAIQFTIDKKV 761
>gi|422294256|gb|EKU21556.1| ribonucleoside-diphosphate reductase subunit M1 [Nannochloropsis
gaditana CCMP526]
Length = 974
Score = 1068 bits (2761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/793 (62%), Positives = 628/793 (79%), Gaps = 12/793 (1%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+VVKRDG++E V FDKIT RL+ L GL+ ++ DP V+QKV G+Y GV+T++LD LA
Sbjct: 130 MHVVKRDGRREPVAFDKITKRLRSLCKGLNTDYVDPGRVAQKVVQGMYNGVSTAELDNLA 189
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA + +HPDYA LAAR+ VSNLHK T SFS+T++ +Y+H + +G A I+++V
Sbjct: 190 AETAAYLNIDHPDYARLAARVSVSNLHKETNPSFSQTMRQLYDHVDPATGHAAGFISEEV 249
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
++ + LD+ + ++RD+ +DYFGFKT+ER+YLLK+ KVVERPQ+ML+RVA+GIH
Sbjct: 250 MALVAAHGPTLDAAVRHERDYFFDYFGFKTMERAYLLKIGRKVVERPQYMLLRVALGIHG 309
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+D+ +A++TY +MS +WF HASPTLF+AGT Q+SSCFL+ M+ DSI GIYDTLK+CA+
Sbjct: 310 EDLPAALETYELMSNKWFIHASPTLFHAGTRFPQMSSCFLLAMQADSIVGIYDTLKQCAV 369
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+SVHNIRA G+YI+GT GTSNG+VPMLRVF+ TARYVDQGGGKR GAFA+Y
Sbjct: 370 ISKAAGGIGLSVHNIRAHGAYIKGTKGTSNGLVPMLRVFDVTARYVDQGGGKRPGAFAIY 429
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIFE LDLRKNHGKEE RARDLFY LW+PDLFMERV+ + WSL CP++ PGLA
Sbjct: 430 LEPWHADIFEVLDLRKNHGKEEARARDLFYGLWIPDLFMERVEEDRTWSLMCPDQCPGLA 489
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC G F LY KYE+EG+ KK V+AQ+LWF IL SQIETGTPYML+KD CN KSNQQNL
Sbjct: 490 DCHGQAFRDLYLKYEREGRVKKTVRAQDLWFAILDSQIETGTPYMLYKDACNLKSNQQNL 549
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVRE---MGVPMESHPSKLVGSR---- 473
GTIKSSNLCTE++QYTS E AVCNLAS+ LP++V + G + + L R
Sbjct: 550 GTIKSSNLCTEIVQYTSAEEVAVCNLASVVLPKFVVQKAGTGGKDDGQAADLTAQRGKRP 609
Query: 474 GSKNRY---FDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADT 530
GSK+R FD + L VT +V NLNK+ID N YPV A RSN RHRPIG+GVQGLADT
Sbjct: 610 GSKSRQELTFDHQALYNVTKVVVRNLNKVIDRNLYPVPEAERSNRRHRPIGLGVQGLADT 669
Query: 531 FILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMW 590
FI L +PFDS EA+Q N++IFET+Y+ A S E+A +EGPYE+Y GSP S+G LQ D+W
Sbjct: 670 FIKLRLPFDSPEARQTNQEIFETMYFAASEASMELAKKEGPYESYPGSPASQGKLQFDLW 729
Query: 591 GVNP-SDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL 649
GV P S RWDW GL+ I+++G+RNSLL+APMPTAST+QILG NEC EPYTSN+Y+RRV
Sbjct: 730 GVTPQSGRWDWAGLKKEIAQHGLRNSLLLAPMPTASTAQILGYNECIEPYTSNLYARRVK 789
Query: 650 SGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKT 709
+GEF+VVN HLL DLT GLW+P ++N ++ + GSVQ IP +P+E+K IY+TVWEIKQK+
Sbjct: 790 AGEFIVVNPHLLEDLTAQGLWTPAVRNALVAEGGSVQNIPGLPQEMKEIYRTVWEIKQKS 849
Query: 710 LVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKF 769
L+DMA DRG YID SQSLN M +P++ +LTS+HF+ W RGLKTGMYYLR++ AA+AI+F
Sbjct: 850 LIDMAADRGAYIDQSQSLNAFMAEPDYSRLTSMHFYGWKRGLKTGMYYLRTKPAANAIQF 909
Query: 770 TVDTS-VLKENPK 781
TVD+ VLK+ K
Sbjct: 910 TVDSQPVLKKRRK 922
>gi|221059988|ref|XP_002260639.1| ribonucleoside-diphosphate reductase, large subunit [Plasmodium
knowlesi strain H]
gi|193810713|emb|CAQ42611.1| ribonucleoside-diphosphate reductase, large subunit, putative
[Plasmodium knowlesi strain H]
Length = 848
Score = 1068 bits (2761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/799 (62%), Positives = 623/799 (77%), Gaps = 21/799 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+ R G++E + FD+I R+++LSYGL E DP V+Q V G+Y G+ T +LDELA
Sbjct: 42 MYVLNRKGEEEDISFDQILKRIQRLSYGLH-ELVDPARVTQGVINGMYSGIKTCELDELA 100
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
A+T A M T HPD++ LAARI NLHKNT +E + +Y Y + G A LI+ +V
Sbjct: 101 AQTCAYMATTHPDFSILAARITTDNLHKNTSDDIAEVAEALY-MYKDVRGRPASLISKEV 159
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YD ++++ RL+ EI Y RDF+YDYFGFKTLERSYLL++ GK++ERPQH+LMRV++GIH
Sbjct: 160 YDFMIQHKDRLNKEIDYTRDFNYDYFGFKTLERSYLLRINGKIIERPQHLLMRVSIGIHI 219
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D++ A++TYH+MSQ++FTHA+PTLFN+GTPR Q+SSCFL+CMK DSIEGI++TLK+CA+
Sbjct: 220 GDLEKALETYHLMSQKYFTHATPTLFNSGTPRPQMSSCFLLCMKSDSIEGIFETLKQCAL 279
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIGV+V +IR SYIRGTNG SNG+VPMLRVFNDTARYVDQGGGKRKG+FAVY
Sbjct: 280 ISKTAGGIGVAVQDIRGQNSYIRGTNGISNGLVPMLRVFNDTARYVDQGGGKRKGSFAVY 339
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWH+DIFEFLDLRKNHGKEE RARDLFYA+WVPDLFM+RV+ N W+L CPNE PGL+
Sbjct: 340 IEPWHSDIFEFLDLRKNHGKEELRARDLFYAVWVPDLFMKRVKENQNWTLMCPNECPGLS 399
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE+LY KYE+EG KK V AQ+LWF IL+SQIETG PYML+KD+CN KSNQ+NL
Sbjct: 400 ESWGAEFEKLYLKYEEEGMGKKTVLAQDLWFAILQSQIETGVPYMLYKDSCNAKSNQKNL 459
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLC E+I+YTSP E AVCNLASIAL ++V R F
Sbjct: 460 GTIKCSNLCCEIIEYTSPDEVAVCNLASIALCKFV------------------DVDKREF 501
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+F+KL E+T I+T NL++II+ NYYPV+ A RSN RHRPIGIGVQGLADTF+LL P++S
Sbjct: 502 NFKKLYEITKIITRNLDQIIERNYYPVQEAERSNKRHRPIGIGVQGLADTFMLLRYPYES 561
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDR-WD 599
A++LNK IFET+YY AL S E+A GPYETY GSP S+GILQ DMW V ++ WD
Sbjct: 562 DSAKELNKRIFETMYYAALEMSMELAQIYGPYETYQGSPASQGILQFDMWNVKVDNKYWD 621
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L++ I K+G+RNSLL+APMPTASTSQILGNNE FEPYTSNIY RRVLSGEF VVN H
Sbjct: 622 WDKLKEKIKKHGLRNSLLLAPMPTASTSQILGNNESFEPYTSNIYYRRVLSGEFFVVNPH 681
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL DL + GLW +K ++I +GSVQ I +IP +LK +YKTVWEIKQK ++DMA DRG
Sbjct: 682 LLKDLFDRGLWDEDMKQQLIAHNGSVQYISEIPNDLKELYKTVWEIKQKNIIDMAADRGA 741
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN 779
+ID SQSLNI++ +P F KL+S+HF+ W +GLKTG YYLR++AA DAIKFTVDT V K
Sbjct: 742 FIDQSQSLNIYIQKPTFAKLSSMHFYGWEKGLKTGAYYLRTQAATDAIKFTVDTQVAKNA 801
Query: 780 PKVTDDDDAKMAQMVCSLT 798
K+ +++ + + V T
Sbjct: 802 AKMKNEEGVAITREVSRET 820
>gi|58267480|ref|XP_570896.1| ribonucleoside-diphosphate reductase large chain [Cryptococcus
neoformans var. neoformans JEC21]
gi|134112167|ref|XP_775272.1| hypothetical protein CNBE3330 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257927|gb|EAL20625.1| hypothetical protein CNBE3330 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227130|gb|AAW43589.1| ribonucleoside-diphosphate reductase large chain, putative
[Cryptococcus neoformans var. neoformans JEC21]
Length = 863
Score = 1068 bits (2761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/777 (63%), Positives = 610/777 (78%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M++ KRDG++E V FDK+TAR+ KLSYGL +P ++QKV G++ G+TT +LD LA
Sbjct: 3 MWIYKRDGRKEPVAFDKVTARINKLSYGLDPNFVEPAEITQKVVQGIHAGITTVELDNLA 62
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT HPDYA LAARI +SNLHK TKK FS + D++ N ++G +P+I DDV
Sbjct: 63 AETAAYLTTKHPDYAILAARIAISNLHKETKKVFSAVVHDLHAWVNPKTGKHSPMIDDDV 122
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y I+M N LDS IIYDRDF Y+YFGFKTLERSYLL++ GK+VERPQHM+MRVAVGIH
Sbjct: 123 YKIVMDNKDILDSAIIYDRDFAYNYFGFKTLERSYLLRINGKIVERPQHMIMRVAVGIHG 182
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+ID I+TY++MS+R+FTHASPTLFNAGTPR Q+SSCFLV MKDDSI+GIYDTLK CA
Sbjct: 183 SNIDKVIETYNLMSERYFTHASPTLFNAGTPRPQMSSCFLVAMKDDSIDGIYDTLKTCAQ 242
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIRA GSYI GTNG SNGI+PMLR ++ TARYVDQGG KR GAFA+Y
Sbjct: 243 ISKTAGGIGLHIHNIRAKGSYIAGTNGYSNGIIPMLRAYDATARYVDQGGNKRPGAFAIY 302
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+F+F+DLRKNHGKEE RARDLFYALW+PDLFM+RV+S+G W+L CP E PGLA
Sbjct: 303 LEPWHADVFDFIDLRKNHGKEEVRARDLFYALWIPDLFMKRVESDGDWTLMCPAECPGLA 362
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE+LY YE++GK +K ++AQ LWF IL++Q ETG PY+ +KD N KSNQ+ L
Sbjct: 363 DVYGEEFEKLYESYERKGKGRKTIKAQKLWFAILEAQTETGVPYICYKDAANSKSNQKQL 422
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+++Y+SP E AVCNLAS+ALP +V + R +
Sbjct: 423 GTIKSSNLCTEIMEYSSPDEVAVCNLASLALPAFV------------------DLERRVY 464
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL E+T +VT+NL+ +I NYYPV AR SN+RHRP+G+GVQGLAD F+ L MPFDS
Sbjct: 465 DFKKLHEITKVVTKNLDTVITRNYYPVPEARNSNMRHRPVGLGVQGLADAFMALRMPFDS 524
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LN IFETIY+ AL S E+A G YE+Y GSP+SKGILQ DMWG P+D WDW
Sbjct: 525 PEARELNIQIFETIYHAALEASCELAEEFGTYESYEGSPISKGILQYDMWGRVPTDLWDW 584
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+++GVRNSLLVAPMPTASTSQILG NECFEPYTS +Y+RRVLSG+F VV L
Sbjct: 585 TELKAKIAQHGVRNSLLVAPMPTASTSQILGWNECFEPYTSMLYARRVLSGDFQVVCPWL 644
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL + LW +K II GS+Q IP IP++LK IY+TVWEI QK ++D+A DRG +
Sbjct: 645 LRDLINLDLWDDNMKQLIIAAGGSIQSIPNIPDDLKKIYRTVWEISQKAVIDLAADRGAF 704
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
ID SQSLNIH+ P+F +LTS+HF+ W RGLKTG YYLR+R +A+AI+FTVD S LK
Sbjct: 705 IDQSQSLNIHLSNPSFPQLTSMHFYGWKRGLKTGCYYLRTRPSANAIQFTVDASTLK 761
>gi|149248790|ref|XP_001528782.1| ribonucleoside-diphosphate reductase large chain 1 [Lodderomyces
elongisporus NRRL YB-4239]
gi|146448736|gb|EDK43124.1| ribonucleoside-diphosphate reductase large chain 1 [Lodderomyces
elongisporus NRRL YB-4239]
Length = 881
Score = 1068 bits (2761), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/778 (63%), Positives = 625/778 (80%), Gaps = 16/778 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG++E V FDKITAR+++L YGL H +PV ++QKV GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEPVRFDKITARVQRLCYGLDPTHVEPVAITQKVIAGVYQGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA LAARI VSNLHK T K +S K +Y + N + L +P+I+ +
Sbjct: 61 AETAATMTTIHPDYAVLAARIAVSNLHKQTTKQYSAVSKILYEYINPETKLHSPMISKET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YDII ++ L+S I+YDRDF+Y+YFGFKTLERSYLL+V GKV ERPQH++MRVA+GIH
Sbjct: 121 YDIIQEHEDELNSAIVYDRDFNYNYFGFKTLERSYLLRVNGKVAERPQHLIMRVAIGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI I+TY++MSQR+FTH SP LFNAGTP+ Q+SSCFLV MK+DSIEGIYDTLK CA+
Sbjct: 181 RDIPRVIETYNLMSQRYFTHGSPCLFNAGTPKPQMSSCFLVAMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+ +HNIR+TG+YI GTNGTSNGI+PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLHIHNIRSTGAYIAGTNGTSNGIIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DIFEF+++RKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF PNEAPGLA
Sbjct: 301 LEPWHSDIFEFIEIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNGDWTLFSPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EFE LY KY EG+ ++ ++AQ LW+ IL+ Q ETGTP+ML+KD CN KSNQ+NL
Sbjct: 361 DCYGEEFEELYNKYVAEGRGRQTIKAQKLWYSILECQTETGTPFMLYKDACNAKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G IKSSNLC E+++Y+SP E AVCNLASIALP ++ E +K+ ++
Sbjct: 421 GMIKSSNLCCEIVEYSSPEEVAVCNLASIALPSFI-------EQDENKI---------WY 464
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+FEKL +VT +VT NLN++ID NYYPV A +SN+RHRPI +GVQGLAD F++L + FDS
Sbjct: 465 NFEKLHDVTKVVTRNLNRVIDRNYYPVPEAEKSNMRHRPIALGVQGLADAFMVLRIAFDS 524
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LN IFETIY+ A+ S E+A EG YETY GSP S+G+LQ D+W P++ WDW
Sbjct: 525 QEARELNIQIFETIYHAAVEASIELAQEEGAYETYQGSPASQGLLQFDLWNRKPTELWDW 584
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ ++K+G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL+GEF +VN +L
Sbjct: 585 DELKAKLAKHGLRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLAGEFQIVNPYL 644
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W+ +K+ II ++GS+Q +P IP+E+KA+YKTVWEI QK ++DMA DR +
Sbjct: 645 LRDLVDLGIWNDAMKSSIISNNGSIQALPNIPDEIKALYKTVWEISQKHIIDMASDRAAF 704
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE 778
ID SQSLNIH+ P GKLTS+HF+ W +GLKTGMYYLR++AA+ AI+FT+D + ++
Sbjct: 705 IDQSQSLNIHIKDPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDKKIAEQ 762
>gi|366989059|ref|XP_003674297.1| hypothetical protein NCAS_0A13590 [Naumovozyma castellii CBS 4309]
gi|342300160|emb|CCC67917.1| hypothetical protein NCAS_0A13590 [Naumovozyma castellii CBS 4309]
Length = 860
Score = 1067 bits (2760), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/775 (62%), Positives = 617/775 (79%), Gaps = 15/775 (1%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG++E V FDKITAR+ +L YGL D V V+Q++ GVY GVTT +LD LA
Sbjct: 1 MYVIKRDGRKEPVQFDKITARISRLCYGLDPARIDAVKVTQRIINGVYSGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AET A MTT HPDYA+LAAR+ +SNLHK T K FS+ I D++++ N +G+ +P+I+ V
Sbjct: 61 AETCAYMTTVHPDYATLAARLAISNLHKQTTKQFSQVIYDLHHYVNPANGIHSPMISKKV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YDI+MKN L+S I+YDRDF ++YFGFKTLERSYLLK+ GKV ERPQH++MRVA+GIH
Sbjct: 121 YDIVMKNKDLLNSTIVYDRDFSFNYFGFKTLERSYLLKLDGKVAERPQHLIMRVALGIHL 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+D+DS I+TY++MS R+F HASPTLFNAGTP+ Q+SSCFL+ MKDDSI+GI++TLKECA+
Sbjct: 181 EDLDSVIETYNLMSLRYFIHASPTLFNAGTPKPQMSSCFLIAMKDDSIDGIFETLKECAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+F+++RKNHGKEE RARDLF ALWVPDLFM+RV+ NG W+LF P+ APGL
Sbjct: 301 LEPWHADIFDFIEIRKNHGKEEIRARDLFPALWVPDLFMKRVEENGQWTLFSPSIAPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LYT+YEKEG+ K ++AQ LW+ IL++Q ETGTP++++KD CN+K+NQ NL
Sbjct: 361 DVYGDEFEELYTRYEKEGRG-KTIKAQKLWYAILEAQTETGTPFVIYKDACNRKTNQSNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G IKSSNLC E+++Y+SP ETAVCNLAS+ALP ++ S K +
Sbjct: 420 GVIKSSNLCCEIVEYSSPDETAVCNLASVALPAFIET--------------SEDGKTSTY 465
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+FEKL E+T +VT NLN++ID NYYPV A RSN+RHRPI +GVQGLADT+++L +PF+S
Sbjct: 466 NFEKLHEITKVVTRNLNRVIDNNYYPVPEAERSNVRHRPIALGVQGLADTYMMLRLPFES 525
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA LNK IFET+Y+ +L +S E+A +EGPYET+ G P SKGILQ DMW P WDW
Sbjct: 526 EEATILNKQIFETMYHASLESSCELAQKEGPYETWEGCPASKGILQMDMWNAEPFGMWDW 585
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR + K G+RNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +L
Sbjct: 586 DTLRKDVVKYGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W +K II +GS+Q +P +P+ELK++YKT+WEI QK ++DMA DR Y
Sbjct: 646 LRDLVDLGIWDDGMKQHIITQNGSIQNLPNVPDELKSLYKTIWEISQKKIIDMAADRSIY 705
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
ID S SLN+ + P GKLTS+HF+ W +GLKTGMYYLR++AA+ AI+FT+D V
Sbjct: 706 IDQSHSLNLFLRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQKV 760
>gi|405120842|gb|AFR95612.1| ribonucleoside-diphosphate reductase large chain [Cryptococcus
neoformans var. grubii H99]
Length = 863
Score = 1067 bits (2759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/777 (63%), Positives = 610/777 (78%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M++ KRDG++E V FDK+TAR+ KLSYGL +P ++QKV G++ G+TT +LD LA
Sbjct: 3 MWIYKRDGRKEPVAFDKVTARINKLSYGLDPNFVEPAEITQKVVQGIHAGITTVELDNLA 62
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT HPDYA LAARI +SNLHK TKK FS + D++ N ++G +P+I DDV
Sbjct: 63 AETAAYLTTKHPDYAILAARIAISNLHKETKKVFSAVVHDLHAWVNPKTGKHSPMIDDDV 122
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y ++M N LDS IIYDRDF Y+YFGFKTLERSYLL++ GK+VERPQHM+MRVAVGIH
Sbjct: 123 YKVVMDNKDILDSAIIYDRDFAYNYFGFKTLERSYLLRINGKIVERPQHMIMRVAVGIHG 182
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+ID I+TY++MS+R+FTHASPTLFNAGTPR Q+SSCFLV MKDDSI+GIYDTLK CA
Sbjct: 183 SNIDKVIETYNLMSERYFTHASPTLFNAGTPRPQMSSCFLVAMKDDSIDGIYDTLKTCAQ 242
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIRA GSYI GTNG SNGI+PMLR ++ TARYVDQGG KR GAFA+Y
Sbjct: 243 ISKTAGGIGLHIHNIRAKGSYIAGTNGYSNGIIPMLRAYDATARYVDQGGNKRPGAFAIY 302
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+F+F+DLRKNHGKEE RARDLFYALW+ DLFM+RV+S+G W+L CP E PGLA
Sbjct: 303 LEPWHADVFDFIDLRKNHGKEEVRARDLFYALWISDLFMKRVESDGDWTLMCPAECPGLA 362
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE+LY YE++GK +K ++AQ LWF IL++Q ETG PY+ +KD N KSNQ++L
Sbjct: 363 DVYGEEFEKLYESYERQGKGRKTIKAQKLWFAILEAQTETGVPYICYKDAANSKSNQKHL 422
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+++Y+SP E AVCNLAS+ALP +V + R +
Sbjct: 423 GTIKSSNLCTEIMEYSSPDEVAVCNLASLALPAFV------------------DLERRVY 464
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL E+T +VT+NL+ +I NYYPV AR SN+RHRP+G+GVQGLAD F+ L MPFDS
Sbjct: 465 DFKKLHEITKVVTKNLDTVITRNYYPVPEARNSNMRHRPVGLGVQGLADAFMALRMPFDS 524
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LN IFETIY+ AL S E+A G YE+Y GSP+SKGILQ DMWG P+D WDW
Sbjct: 525 AEARELNIQIFETIYHAALEASCELAEEFGTYESYEGSPISKGILQYDMWGRVPTDLWDW 584
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I++NGVRNSLLVAPMPTASTSQILG NECFEPYTS +Y+RRVLSG+F VV L
Sbjct: 585 TELKAKIAQNGVRNSLLVAPMPTASTSQILGWNECFEPYTSMLYARRVLSGDFQVVCPWL 644
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL + LW +K II GS+Q IP IP++LK IY+TVWEI QK ++D+A DRG +
Sbjct: 645 LRDLINLDLWDDNMKQLIIAAGGSIQSIPNIPDDLKKIYRTVWEISQKAVIDLAADRGAF 704
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
ID SQSLNIH+ P+F +LTS+HF+ W RGLKTG YYLR+R +A+AI+FTVD S LK
Sbjct: 705 IDQSQSLNIHLSNPSFPQLTSMHFYGWKRGLKTGCYYLRTRPSANAIQFTVDASTLK 761
>gi|313233631|emb|CBY09802.1| unnamed protein product [Oikopleura dioica]
gi|313245650|emb|CBY40318.1| unnamed protein product [Oikopleura dioica]
Length = 832
Score = 1067 bits (2759), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 509/848 (60%), Positives = 638/848 (75%), Gaps = 59/848 (6%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
+ V KRDG+ E V FDKIT+R+KKL Y L + P+ V++KV G+Y GVTT +LD LA
Sbjct: 4 LKVKKRDGRLEEVFFDKITSRIKKLCYNLDMNILSPLSVTRKVIDGIYDGVTTVELDNLA 63
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYN--HYNERSGLKAPLIAD 118
AETAA M+ NHPDYA LAARI VSNLHK TKK F+E I+D+ N YN G K PLI++
Sbjct: 64 AETAAQMSVNHPDYAILAARISVSNLHKETKKLFTEVIEDLRNVEGYN---GKKKPLISE 120
Query: 119 DVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGI 178
Y I++ N +L+S +I+DRD++Y+YFGFKTLERSYL+K+ GK +ERPQHMLMRV+VGI
Sbjct: 121 KTYKIVVANKDKLNSAVIHDRDYEYNYFGFKTLERSYLMKIDGKTIERPQHMLMRVSVGI 180
Query: 179 HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKEC 238
H +DID+A++TY+ MS ++FTHASPTLFN+GTPR Q+SSCFLV M+DDSIEGIYDTLK C
Sbjct: 181 HGEDIDAALETYNFMSLKYFTHASPTLFNSGTPRPQMSSCFLVAMQDDSIEGIYDTLKTC 240
Query: 239 AIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA 298
A+ISK+AGGIGV+VHNIRA GSYI GTNG SNG++PMLRV+N+TARYVDQGG KR GAFA
Sbjct: 241 ALISKNAGGIGVNVHNIRARGSYIGGTNGHSNGLIPMLRVYNNTARYVDQGGNKRPGAFA 300
Query: 299 VYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPG 358
VYLEPWHADIFEFLD +KN G EE RARDLFYALW+PDLFM+RV+SNG W+LFCP+EAPG
Sbjct: 301 VYLEPWHADIFEFLDAKKNTGSEETRARDLFYALWIPDLFMKRVESNGDWTLFCPDEAPG 360
Query: 359 LADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQ 418
L +CWG EFE L+ KYEKEG+ K+ ++AQ LW++I+++QIE G PYML+KD CN+KSNQQ
Sbjct: 361 LHECWGEEFEALFEKYEKEGRGKETIKAQALWYKIIEAQIEVGVPYMLYKDACNRKSNQQ 420
Query: 419 NLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNR 478
NLGTIK SNLCTE+++Y+S E AVCNLAS++LP ++R+ +G
Sbjct: 421 NLGTIKCSNLCTEIVEYSSKDEVAVCNLASLSLPAFIRK-------------NDQGFS-- 465
Query: 479 YFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPF 538
+DF+ L + T IVT NLNK+ID+N+YPVE AR SN++HRPIGIGVQGLADTF +L + F
Sbjct: 466 VYDFQDLYDKTKIVTRNLNKVIDINFYPVEQARFSNMQHRPIGIGVQGLADTFCMLKLAF 525
Query: 539 DSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHG------------SPVSKGILQ 586
+S EA+ LNK IFETIY+ A+ S E+A +EGPY ++ SP+++G Q
Sbjct: 526 ESDEAKLLNKQIFETIYFAAVEASCELAEKEGPYLSFRAHTHPITGQKNPDSPMAQGKFQ 585
Query: 587 PDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSR 646
D+WGV P+D WDW LR+ ++++GVRNSLLV+PMPTAST+QILGNNE EP+T+NIY+R
Sbjct: 586 FDLWGVTPTDLWDWDSLREKVTRHGVRNSLLVSPMPTASTAQILGNNESIEPFTNNIYTR 645
Query: 647 RVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIK 706
RVLSGEF VVN HLL +LTE+ W I+ +I+ D+GS+Q + IP ++K Y+TVWEIK
Sbjct: 646 RVLSGEFQVVNPHLLRELTEINYWDDEIRQQIVQDNGSIQNL-DIPADIKERYRTVWEIK 704
Query: 707 QKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADA 766
QK ++ MA DRG +ID SQSLNIH+ QP +G LTS+HF W GLKTGMYYLR++ AA A
Sbjct: 705 QKNVLQMAADRGPFIDQSQSLNIHVAQPKYGTLTSMHFTGWKMGLKTGMYYLRTKPAAAA 764
Query: 767 IKFTVD--------------------------TSVLKENPKVTDDDDAKMAQMVCSLTNR 800
IKFTVD S LKE P D A +VCSL N+
Sbjct: 765 IKFTVDKSKVKVEEKENVEVKIEAATKSPVKAVSSLKEGPSEDDIRRLNEAALVCSLENK 824
Query: 801 EECMACGS 808
E CM C S
Sbjct: 825 EACMMCSS 832
>gi|443242948|ref|YP_007376173.1| ribonucleoside-diphosphate reductase [Nonlabens dokdonensis DSW-6]
gi|442800347|gb|AGC76152.1| ribonucleoside-diphosphate reductase [Nonlabens dokdonensis DSW-6]
Length = 868
Score = 1066 bits (2758), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/774 (65%), Positives = 622/774 (80%), Gaps = 24/774 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+VVKRDG +E V FDKITAR++KL YGLS H DPV V+ +V G+Y GVTTS+LD LA
Sbjct: 1 MFVVKRDGHKEPVMFDKITARVRKLCYGLS-NHVDPVKVAMRVIDGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA LAARI VSNLHKNTKK+FS+ + D+Y + N R+ KAP+I+D+V
Sbjct: 60 AETAATMTTAHPDYARLAARISVSNLHKNTKKTFSDVVTDLYEYVNPRTSKKAPMISDEV 119
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y +I NA RL+S IIY+RDF YDYFGFKTLERSYLLK+ G++ ERPQHMLMRV+VGIH
Sbjct: 120 YKVIQDNADRLNSAIIYNRDFGYDYFGFKTLERSYLLKINGQIAERPQHMLMRVSVGIHI 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD+D+AI+TY +MS+++FTHA+PTLFNAGTP+ Q+SSCFL+ M+DDSIEGIYDTLK+ A
Sbjct: 180 DDLDAAIETYELMSKKFFTHATPTLFNAGTPKPQMSSCFLLTMQDDSIEGIYDTLKQTAK 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HNIRA GSYI GTNGTSNGIVPML+V+NDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNIRARGSYIGGTNGTSNGIVPMLKVYNDTARYVDQGGGKRKGSFAIY 299
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWHADIF+FLDL+KNHGKEE RARDLFYA+W+ DLFM+RV++N W+L CP+E P L
Sbjct: 300 MEPWHADIFDFLDLKKNHGKEEMRARDLFYAMWISDLFMKRVETNDTWTLMCPHECPDLY 359
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ G EFE LYTKYE+EGK +K + A+ LW +IL+SQIETGTPYML+KD N KSNQ+NL
Sbjct: 360 NVHGDEFEALYTKYEQEGKGRKTIPARELWDKILESQIETGTPYMLYKDAANNKSNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+I+YT+P E AVCNLASIALP +V K+ F
Sbjct: 420 GTIRSSNLCTEIIEYTAPDEVAVCNLASIALPMFV--------------------KDGAF 459
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D + L +VT VT NLNK+ID NYYPV+ A SN+RHRP+G+G+QGLAD FI+L +PF
Sbjct: 460 DHKALYKVTKRVTRNLNKVIDRNYYPVKEAENSNMRHRPVGLGIQGLADAFIMLRLPFTC 519
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP---SDR 597
EA+QLN DIFET+Y+ A S E+A EG Y T+ GSP+S+G Q +MW +N S R
Sbjct: 520 DEAKQLNSDIFETLYFAACEASMEMAQEEGAYSTFAGSPMSQGQFQYNMWNINDDQLSGR 579
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
W+W LR + ++GVRNSLLVAPMPTASTSQILGNNE FEPYTSNIY+RR LSGEF+VVN
Sbjct: 580 WNWADLRTKVMEHGVRNSLLVAPMPTASTSQILGNNEAFEPYTSNIYTRRTLSGEFIVVN 639
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
KHLL DL ++GLW +KN I+ ++GS+Q I IPE++K +YKTVWE+K K ++DM+ +R
Sbjct: 640 KHLLKDLVDLGLWDDSLKNAIMRNNGSIQAIEGIPEDIKELYKTVWELKMKDIIDMSRER 699
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTV 771
G +ID SQSLN+ M+ KLTS+HF+AW GLKTGMYYLR++AA DAIKFTV
Sbjct: 700 GYFIDQSQSLNLFMENVTTSKLTSMHFYAWKSGLKTGMYYLRTKAAVDAIKFTV 753
>gi|406025256|ref|YP_006705557.1| ribonucleoside-diphosphate reductase large subunit [Cardinium
endosymbiont cEper1 of Encarsia pergandiella]
gi|404432855|emb|CCM10137.1| Ribonucleoside-diphosphate reductase large subunit [Cardinium
endosymbiont cEper1 of Encarsia pergandiella]
Length = 778
Score = 1066 bits (2757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/772 (63%), Positives = 623/772 (80%), Gaps = 20/772 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M VVKRDG+ E++ FDKIT R++KL YGL+ ++ D + + +K+ G++ V TS +D LA
Sbjct: 1 MLVVKRDGRLESIKFDKITLRIEKLCYGLNRDYIDIIAIVKKIIEGIHDRVATSAIDSLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AET AAM HPDY LAARI +SNLHK T KSFS TIK +Y + N +G A LI +
Sbjct: 61 AETVAAMAVYHPDYTILAARIAISNLHKATSKSFSSTIKRLYTYVNPATGTNASLIDKAI 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y I+ ++AA LD I+++RDF YD+FGFKTLERSYLLK+ GK+VERPQ+MLMRVA+GIH
Sbjct: 121 YKIVSEHAATLDDAIVHERDFSYDFFGFKTLERSYLLKINGKIVERPQYMLMRVALGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D++++ + TY +MS++WFTHA+PTLFNAGTPR QLSSCFL+ ++DSIEGIY+TL +CA
Sbjct: 181 DNLNAVLDTYQLMSEKWFTHATPTLFNAGTPRPQLSSCFLLTTQNDSIEGIYNTLTQCAK 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+ AGGIG+S+HNIRATGSYIRGTNG SNGIVPMLR F+ TARYVDQGGG+RKG+F++Y
Sbjct: 241 ISQFAGGIGLSIHNIRATGSYIRGTNGMSNGIVPMLRNFDMTARYVDQGGGRRKGSFSIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+FL+L+KNHGKEE RARDLFY LW+PDLFMERV+++ +WSLFCPNEAPGLA
Sbjct: 301 LEPWHADIFDFLELKKNHGKEERRARDLFYGLWIPDLFMERVEADEMWSLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G FE+ Y +YEKEG+A+ ++AQ LWF IL++QIETGTPYML+KD N+KSNQ+NL
Sbjct: 361 DCYGAAFEQKYKQYEKEGRARTSIKAQTLWFAILEAQIETGTPYMLYKDAANEKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I+YT+P E AVCNLASIALP +V + NR F
Sbjct: 421 GTIKSSNLCTEIIEYTAPDEIAVCNLASIALPMFVDD-------------------NRSF 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D KL EVT +VT+NLNK+ID NYYP+ AR SNL+HRP+G+GVQGLAD F+ + + FDS
Sbjct: 462 DHTKLYEVTYLVTKNLNKVIDRNYYPLPEARYSNLKHRPMGLGVQGLADAFLKMRLVFDS 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSD-RWD 599
EA+ LN++IFETIY+ AL S ++A +EG YE+Y GSP+S+GILQ DMWGV PS RW+
Sbjct: 522 PEARLLNQEIFETIYFAALTASKDLAQKEGVYESYPGSPMSEGILQFDMWGVTPSSGRWN 581
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR I+++G+RN+LLVAPMPTASTSQILGNNECFEPYT+NIY+RRVLSGEF+VVNK+
Sbjct: 582 WDHLRKEIAQHGIRNALLVAPMPTASTSQILGNNECFEPYTANIYTRRVLSGEFIVVNKY 641
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL DL ++GLW+ +K +I +GS+Q+I IPE +K +Y+TVWEI QK+++DMA DR
Sbjct: 642 LLADLIQLGLWNEEVKEALIIGNGSIQQIACIPEYIKKMYRTVWEIPQKSIIDMAADRAP 701
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTV 771
YI SQSLN+++ KLTS+HF+AW +GLKTGMYYLR++AAADAIKFT+
Sbjct: 702 YICQSQSLNLYVKDATMAKLTSMHFYAWKKGLKTGMYYLRTKAAADAIKFTI 753
>gi|401625263|gb|EJS43279.1| rnr3p [Saccharomyces arboricola H-6]
Length = 869
Score = 1066 bits (2757), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/775 (62%), Positives = 616/775 (79%), Gaps = 15/775 (1%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG+QE V FDKIT+R+ +LSYGL D V V+Q++ +GVY GVTT +LD LA
Sbjct: 1 MFVIKRDGRQEPVQFDKITSRITRLSYGLDPNRIDAVKVTQRIISGVYSGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AET A MTT HPDYA+LAARI +SNLHK T K FS+ I+D+++ N +G AP+I+D++
Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVIEDLHDWINPATGKHAPMISDEI 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+I+M+N L+S I+YDRDF Y YFGFKTLERSYLL++ G+V ERPQH++MRVA+GIH
Sbjct: 121 YNIVMENKDTLNSAIVYDRDFKYTYFGFKTLERSYLLRLDGEVAERPQHLVMRVALGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D+++ +KTY++MS R+FTHASPTLFNAGTP Q+SSCFL+ MKDDSIEGIYDTLKECA+
Sbjct: 181 SDLEAVLKTYNLMSLRYFTHASPTLFNAGTPHPQMSSCFLIAMKDDSIEGIYDTLKECAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGG+G+ ++NIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA++
Sbjct: 241 ISKTAGGVGLHINNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALF 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+F+D+RK HGKEE RARDLF ALW+PDLFM+RVQ +G W+LF P+ APGL
Sbjct: 301 LEPWHADIFDFVDIRKTHGKEEIRARDLFPALWIPDLFMKRVQEDGAWTLFSPSAAPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG EFE LYT+YE EG+ K ++AQ LW+ IL++Q ETGTP+M++KD CN+K+NQQNL
Sbjct: 361 DVWGDEFEALYTRYETEGRG-KTIKAQKLWYAILQAQTETGTPFMVYKDACNRKTNQQNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLC E+++Y+SP ETAVCNLASIALP +V S K +
Sbjct: 420 GTIKSSNLCCEIVEYSSPDETAVCNLASIALPAFVEL--------------SEDGKTATY 465
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+FE L E+ ++T NLN++ID NYYPV AR SN+RHRPI +GVQGLADT+++L +PF+S
Sbjct: 466 NFESLHEIAKVITHNLNRVIDRNYYPVPEARNSNMRHRPIALGVQGLADTYMMLRLPFES 525
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIY+ L S E+A +EG Y T+ GSP SKGILQ DMW P WDW
Sbjct: 526 DEAQTLNKQIFETIYHATLEASCELAQKEGKYSTFEGSPASKGILQFDMWNAKPFGMWDW 585
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I ++G+RNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +L
Sbjct: 586 ETLRKDIVEHGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W +K +I ++GS+Q +P +P+ LK +YKTVWEI QKT+++MA DR Y
Sbjct: 646 LRDLVDLGIWDDSMKQYLITENGSIQGLPNVPQVLKELYKTVWEISQKTIINMAADRSIY 705
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
ID S SLN+ + P+ GK+TS+HF+ W +GLKTGMYYLR++AA+ AI+FT+D V
Sbjct: 706 IDQSHSLNLFLQAPSMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQEV 760
>gi|392575022|gb|EIW68156.1| hypothetical protein TREMEDRAFT_39705 [Tremella mesenterica DSM
1558]
Length = 856
Score = 1065 bits (2755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/778 (65%), Positives = 615/778 (79%), Gaps = 18/778 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M++ KRDG++E V FDK+TAR+ KLSYGL +P ++QKV G++ G+TT +LD LA
Sbjct: 3 MWIYKRDGRKEHVAFDKVTARINKLSYGLDPNFIEPAEITQKVIQGIHTGITTVELDNLA 62
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT HPDYA LAARI +SNLHK TKKSFS + D+Y+ N ++G AP+IAD+V
Sbjct: 63 AETAAYLTTKHPDYAILAARIAISNLHKETKKSFSAVVHDLYSWVNPKTGKHAPMIADEV 122
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y +IM N LD+ IIYDRDF Y+YFGFKTLERSYLL+V GK+VERPQHM+MRVAVGIH
Sbjct: 123 YKVIMDNKDTLDAAIIYDRDFAYNYFGFKTLERSYLLRVNGKIVERPQHMIMRVAVGIHG 182
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D+ID ++TY++MS+R+FTHASPTLFNAGTP AQ+SSCFLV M+DDSIEGIYDTLK CA
Sbjct: 183 DNIDKVLETYNLMSERYFTHASPTLFNAGTPHAQMSSCFLVAMRDDSIEGIYDTLKTCAQ 242
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIRA GSYI GTNG SNGIVPMLR F+ TARYVDQGG KR GAFA+Y
Sbjct: 243 ISKTAGGIGLHIHNIRAKGSYIAGTNGYSNGIVPMLRAFDATARYVDQGGNKRPGAFAIY 302
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+FLDLRKNHGKEE RARDLFYALW+ DLFM+RV+S+G W+L CP E PGLA
Sbjct: 303 LEPWHADIFDFLDLRKNHGKEEVRARDLFYALWISDLFMKRVESDGDWTLMCPAECPGLA 362
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D FE LY +YE+EGK +K ++AQ LWF IL++Q ETG P+ML+KD N KSNQQ+L
Sbjct: 363 DVHSEAFEELYERYEREGKGRKTIKAQKLWFAILEAQTETGGPFMLYKDAANAKSNQQHL 422
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I+Y++P E AVCNLAS+ALP +V ME R +
Sbjct: 423 GTIKSSNLCTEIIEYSAPDEVAVCNLASLALPAFVD-----ME-------------RRVY 464
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL E+T +VT+NL+ +I NYYPV A RSN+RHRP+G+GVQGLAD F+ L MPFDS
Sbjct: 465 DFKKLHEITKVVTKNLDTVISRNYYPVPEAHRSNMRHRPVGLGVQGLADAFMALRMPFDS 524
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
A++LN IFETIY+ AL +S E+A G YETY GSP+S+G LQ D+WG P+D WDW
Sbjct: 525 PAARELNIQIFETIYHAALESSCEMAQERGKYETYEGSPISQGKLQFDLWGRVPTDLWDW 584
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I+K+GVRNSLLVAPMPTASTSQILG NECFEPYTS +Y+RRVLSG+F VV L
Sbjct: 585 TELRANIAKHGVRNSLLVAPMPTASTSQILGWNECFEPYTSMLYARRVLSGDFQVVCPWL 644
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL +GLW +KN II GS+Q IP IP ELKAIYKTVWEI QK ++D+A DRG Y
Sbjct: 645 LRDLINLGLWDDHMKNLIIAAGGSIQNIPSIPAELKAIYKTVWEISQKAVIDLAADRGAY 704
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE 778
ID SQSLNIH+ P+F +LTS+HF+ W RGLKTG+YYLR++ +A AI+FT+D S LK+
Sbjct: 705 IDQSQSLNIHLANPSFSQLTSMHFYGWKRGLKTGLYYLRTKPSAQAIQFTIDASTLKQ 762
>gi|321259241|ref|XP_003194341.1| ribonucleoside-diphosphate reductase large chain [Cryptococcus
gattii WM276]
gi|317460812|gb|ADV22554.1| ribonucleoside-diphosphate reductase large chain, putative
[Cryptococcus gattii WM276]
Length = 863
Score = 1065 bits (2755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/777 (63%), Positives = 612/777 (78%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M++ KRDG++E V FDK+TAR+ KLSYGL +P ++QKV G++ G+TT +LD LA
Sbjct: 3 MWIYKRDGRKEPVAFDKVTARINKLSYGLDPNFVEPAEITQKVVQGIHAGITTVELDNLA 62
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT HPDYA LAARI +SNLHK TKK FS + D++ N ++G +P+I D+V
Sbjct: 63 AETAAYLTTKHPDYAILAARIAISNLHKETKKVFSAVVHDLHAWVNPKTGKHSPMIDDEV 122
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y ++M N LDS IIYDRDF Y+YFGFKTLERSYLL++ GK+VERPQHM+MRVAVGIH
Sbjct: 123 YKVVMDNKDILDSAIIYDRDFAYNYFGFKTLERSYLLRINGKIVERPQHMIMRVAVGIHG 182
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+ID I+TY++MS+R+FTHASPTLFNAGTPR Q+SSCFLV MKDDSI+GIYDTLK CA
Sbjct: 183 ANIDKVIETYNLMSERYFTHASPTLFNAGTPRPQMSSCFLVAMKDDSIDGIYDTLKTCAQ 242
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIRA GSYI GTNG SNGI+PMLR ++ TARYVDQGG KR GAFA+Y
Sbjct: 243 ISKTAGGIGLHIHNIRAKGSYIAGTNGYSNGIIPMLRAYDATARYVDQGGNKRPGAFAIY 302
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+F+F+DLRKNHGKEE RARDLFYALW+PDLFM+RV+S+G W+L CP E PGLA
Sbjct: 303 LEPWHADVFDFIDLRKNHGKEEVRARDLFYALWIPDLFMKRVESDGDWTLMCPAECPGLA 362
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE+LY YE++GK +K ++AQ LWF IL++Q ETG PY+ +KD N KSNQ++L
Sbjct: 363 DVYGEEFEKLYESYERQGKGRKTIKAQKLWFAILEAQTETGVPYICYKDAANSKSNQKHL 422
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+++Y+SP E AVCNLAS+ALP +V + R +
Sbjct: 423 GTIKSSNLCTEIMEYSSPDEVAVCNLASLALPAFV------------------DLERRVY 464
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL E+T +VT+NL+ +I NYYPV AR SN+RHRP+G+GVQGLAD F+ L MPFDS
Sbjct: 465 DFKKLHEITKVVTKNLDTVITRNYYPVPEARNSNMRHRPVGLGVQGLADAFMALRMPFDS 524
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LN IFETIY+ AL S E+A +G YE+Y GSP+SKGILQ DMWG P+D WDW
Sbjct: 525 LEARELNIQIFETIYHAALEASCELAEEQGTYESYEGSPLSKGILQYDMWGRVPTDLWDW 584
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+++GVRNSLLVAPMPTASTSQILG NECFEPYTS +Y+RRVLSG+F VV L
Sbjct: 585 TELKAKIAQHGVRNSLLVAPMPTASTSQILGWNECFEPYTSMLYARRVLSGDFQVVCPWL 644
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL + LW +K II GS+Q IP IP++LK IY+TVWEI QK ++D+A DRG +
Sbjct: 645 LRDLINLDLWDDNMKQLIIAAGGSIQSIPNIPDDLKKIYRTVWEISQKAVIDLAADRGAF 704
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
ID SQSLNIH+ P+F +LTS+HF+ W RGLKTG YYLR+R +A+AI+FT+D S LK
Sbjct: 705 IDQSQSLNIHLSNPSFPQLTSMHFYGWKRGLKTGCYYLRTRPSANAIQFTIDASTLK 761
>gi|1710391|sp|P50648.1|RIR1_PLAF4 RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleotide reductase R1 subunit
gi|497904|gb|AAA50171.1| ribonucleotide reductase large subunit [Plasmodium falciparum]
Length = 806
Score = 1065 bits (2755), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/824 (61%), Positives = 630/824 (76%), Gaps = 38/824 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+ R G++E + FD+I R+++LSYGL E DP V+Q V G+Y G+ T +LDELA
Sbjct: 1 MYVLNRKGEEEDISFDQILKRIQRLSYGLH-ELVDPARVTQGVINGMYSGIKTCELDELA 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
A+T A M T HPD++ LAARI NLHKNT +E + +Y Y + G A LI+ +V
Sbjct: 60 AQTCAYMATTHPDFSILAARITTDNLHKNTSDDVAEVAEALYT-YKDVRGRPASLISKEV 118
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YD I+ + RL+ EI Y RDF+YDYFGFKTLERSYLL++ K++ERPQH+LMRV++GIH
Sbjct: 119 YDFILLHKDRLNKEIDYTRDFNYDYFGFKTLERSYLLRINNKIIERPQHLLMRVSIGIHI 178
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDID A++TYH+MSQ++FTHA+PTLFN+GTPR Q+SSCFL+ MK DSIEGI++TLK+CA+
Sbjct: 179 DDIDKALETYHLMSQKYFTHATPTLFNSGTPRPQMSSCFLLSMKADSIEGIFETLKQCAL 238
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIGV+V +IR SYIRGTNG SNG+VPMLRVFNDTARYVDQGGGKRKG+FAVY
Sbjct: 239 ISKTAGGIGVAVQDIRGQNSYIRGTNGISNGLVPMLRVFNDTARYVDQGGGKRKGSFAVY 298
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWH+DIFEFLDLRKNHGKEE RARDLFYA+WVPDLFM+RV+ N W+L CPNE PGL+
Sbjct: 299 IEPWHSDIFEFLDLRKNHGKEELRARDLFYAVWVPDLFMKRVKENKNWTLMCPNECPGLS 358
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE+LYTKYE+E KK V AQ+LWF IL+SQIETG PYML+KD+CN KSNQ+NL
Sbjct: 359 ETWGEEFEKLYTKYEEENMGKKTVLAQDLWFAILQSQIETGVPYMLYKDSCNAKSNQKNL 418
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLC E+I+YTSP E AVCNLASIAL ++V + + F
Sbjct: 419 GTIKCSNLCCEIIEYTSPDEVAVCNLASIALCKFV------------------DLEKKEF 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+F+KL E+T I+T NL+KII+ NYYPV+ A+ SN RHRPIGIGVQGLADTF+LL P++S
Sbjct: 461 NFKKLYEITKIITRNLDKIIERNYYPVKEAKTSNTRHRPIGIGVQGLADTFMLLRYPYES 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDR-WD 599
A++LNK IFET+YY AL S E+A+ GPYE+Y GSP S+GILQ DMW ++ WD
Sbjct: 521 DAAKELNKRIFETMYYAALEMSVELASIHGPYESYQGSPASQGILQFDMWNAKVDNKYWD 580
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L+ I K+G+RNSLL+APMPTASTSQILGNNE FEPYTSNIY RRVLSGEF VVN H
Sbjct: 581 WDELKAKIRKHGLRNSLLLAPMPTASTSQILGNNESFEPYTSNIYYRRVLSGEFFVVNPH 640
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL DL + GLW +K ++I +GS+Q I +IP++LK +YKTVWEIKQK ++DMA DRG
Sbjct: 641 LLKDLFDRGLWDEDMKQQLIAHNGSIQYISEIPDDLKELYKTVWEIKQKNIIDMAADRGI 700
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN 779
+ID SQSLNI++ +P F KL+S+HF+ W +GLKTG YYLR++AA DAIKFTVDT V K
Sbjct: 701 FIDQSQSLNIYIQKPTFAKLSSMHFYGWEKGLKTGAYYLRTQAATDAIKFTVDTHVAKNA 760
Query: 780 PKVTDDD---------------DAKMAQMVCSL--TNREECMAC 806
K+ + D ++ + Q VC L N E+C+ C
Sbjct: 761 VKLKNADGVQITREVSRETISTESTVTQNVCPLRRNNDEQCLMC 804
>gi|380020101|ref|XP_003693934.1| PREDICTED: LOW QUALITY PROTEIN: ribonucleoside-diphosphate
reductase large subunit-like [Apis florea]
Length = 822
Score = 1065 bits (2753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 516/834 (61%), Positives = 637/834 (76%), Gaps = 44/834 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG++E VHFDKIT+R+ KL Y L +++ DP ++ +V +G+Y GVTT +LD LA
Sbjct: 7 MYVIKRDGRKEDVHFDKITSRISKLCYNLDMDYIDPSAITFRVISGLYSGVTTVELDNLA 66
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA LAARI +SNLHK T KSFSE + ++Y+ + + + P+I++
Sbjct: 67 AETAATMTTKHPDYAILAARIAISNLHKETTKSFSEVMYNLYHVKEQYTNNQKPVISEKY 126
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+II KNA +L+S IIYDRDF Y+YFGFKTLERSYLLK+ GKVVERPQHMLMRVAV IH
Sbjct: 127 YNIIQKNANKLNSAIIYDRDFSYNYFGFKTLERSYLLKIHGKVVERPQHMLMRVAVAIHG 186
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID AI+TY+ +S+R+FTHASPTLF+A T + Q+SSCFL+ M +DSIEGIYDTLK CA+
Sbjct: 187 EDIDKAIETYNFLSERYFTHASPTLFSACTRQQQMSSCFLLTMSEDSIEGIYDTLKRCAL 246
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++VH IRA G+ I GT G SNG++PM+RV+N+TARYVDQGG KR GAFA+Y
Sbjct: 247 ISKSAGGIGLNVHCIRARGTPIAGTLGVSNGLIPMIRVYNNTARYVDQGGNKRPGAFAIY 306
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIFEFLDL+KN GKEE+RAR+LFYALW+PDLFM+RV NG+W+L CP+E+PGLA
Sbjct: 307 LEPWHADIFEFLDLKKNTGKEENRARELFYALWIPDLFMKRVLDNGIWTLMCPHESPGLA 366
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG EFE LYT+YE E + K+ +QA++LW IL SQ+ETGTPYML+KD CN+KSN QN+
Sbjct: 367 DVWGNEFEILYTRYENEKRYKRQIQARDLWTAILISQVETGTPYMLYKDHCNRKSNHQNI 426
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTEV+QY+SP E AVCNLASIA+ +V N+ F
Sbjct: 427 GTIKSSNLCTEVVQYSSPDEVAVCNLASIAVNMFV------------------NPNNQTF 468
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL +VT IVT NL+KIIDVNYYP+ AR+SN RHRPIGIG+QGLAD F+L+ PF+S
Sbjct: 469 DFQKLLKVTKIVTCNLDKIIDVNYYPIPEARKSNFRHRPIGIGIQGLADAFLLMRYPFES 528
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ+LN IFET+YY AL S E+A +G YETY GSPVSKGILQ DMW V P++ WDW
Sbjct: 529 EEAQKLNIQIFETLYYGALEASCELAEEKGTYETYEGSPVSKGILQYDMWNVIPTNLWDW 588
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+K GVRNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 589 TILKXKIAKYGVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQVVNPHL 648
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE LW +KN+II ++GS+Q I +IP++LK +YKTVWEI QK ++ MA DRG +
Sbjct: 649 LRDLTERDLWDEDMKNEIIANNGSIQDIERIPDDLKMLYKTVWEIPQKIILKMAADRGAF 708
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLN+HM +P KLTS+HF+ W GLKTGMYYLR++ AA+A++FTVD S L+
Sbjct: 709 IDQSQSLNVHMAKPTTEKLTSMHFYGWKMGLKTGMYYLRTKPAANALQFTVDKSKLRNIT 768
Query: 781 KVTDDDDAKMAQ--------------------------MVCSLTNREECMACGS 808
+T + + CS N + CMACGS
Sbjct: 769 NITSNQSINSENDNNEELNNSSQNGWLQDQNKEDVDIVLACSRENGDACMACGS 822
>gi|156101822|ref|XP_001616604.1| ribonucleoside-diphosphate reductase large chain [Plasmodium vivax
Sal-1]
gi|148805478|gb|EDL46877.1| ribonucleoside-diphosphate reductase large chain, putative
[Plasmodium vivax]
Length = 848
Score = 1065 bits (2753), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 507/825 (61%), Positives = 631/825 (76%), Gaps = 39/825 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+ R G++E + FD+I R+++LSYGL E DP V+Q V G+Y G+ T +LDELA
Sbjct: 42 MYVLNRKGEEEDISFDQILKRIQRLSYGLH-ELVDPARVTQGVINGMYSGIKTCELDELA 100
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
A+T A M T HPD++ LAARI NLHKNT E + +Y Y + G A LI+ +V
Sbjct: 101 AQTCAYMATTHPDFSILAARITTDNLHKNTSDDIGEVAEALYK-YTDVRGRPASLISKEV 159
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+ ++++ RL+ EI Y RDF+YDYFGFKTLERSYLL++ GK++ERPQH+LMRV++GIH
Sbjct: 160 YEFMIEHKDRLNKEIDYTRDFNYDYFGFKTLERSYLLRINGKIIERPQHLLMRVSIGIHI 219
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D++ A++TYH+MSQ++FTHA+PTLFN+GTPR Q+SSCFL+CMK DSIEGI++TLK+CA+
Sbjct: 220 GDLEKALETYHLMSQKYFTHATPTLFNSGTPRPQMSSCFLLCMKSDSIEGIFETLKQCAL 279
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIGV+V +IR SYIRGTNG SNG+VPMLRVFNDTARYVDQGGGKRKG+FAVY
Sbjct: 280 ISKTAGGIGVAVQDIRGQNSYIRGTNGISNGLVPMLRVFNDTARYVDQGGGKRKGSFAVY 339
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWH+DIFEFLDLRKNHGKEE RARDLFYA+WVPDLFM+RV+ N W+L CPNE PGL+
Sbjct: 340 IEPWHSDIFEFLDLRKNHGKEELRARDLFYAVWVPDLFMKRVKENKNWTLMCPNECPGLS 399
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE+LYTKYE+E KK V AQ+LWF IL+SQIETG PYML+KD+CN KSNQ+NL
Sbjct: 400 ESWGEEFEKLYTKYEEENMGKKTVLAQDLWFAILQSQIETGVPYMLYKDSCNAKSNQKNL 459
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLC E+I+YTSP E AVCNLASIAL ++V + R F
Sbjct: 460 GTIKCSNLCCEIIEYTSPDEVAVCNLASIALCKFV------------------DVEKREF 501
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+F+KL E+T I+T NL++II+ NYYPVE A+RSN RHRPIGIGVQGLADTF+LL P++S
Sbjct: 502 NFKKLYEITKIITRNLDQIIERNYYPVEEAKRSNKRHRPIGIGVQGLADTFMLLRYPYES 561
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDR-WD 599
A++LNK IFET+YY AL S E+A GPYETY GSP S+GILQ DMW V + WD
Sbjct: 562 DSAKELNKRIFETMYYGALEMSMELAQLYGPYETYQGSPASQGILQFDMWNVKVDKKYWD 621
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L+ I K+G+RNSLL+APMPTASTSQILGNNE FEPYTSNIY RRVLSGEF VVN H
Sbjct: 622 WDELKAKIKKHGLRNSLLLAPMPTASTSQILGNNESFEPYTSNIYYRRVLSGEFFVVNPH 681
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL DL + GLW +K ++I +GSVQ I +IP +LK +YKTVWEIKQK ++DMA DRG
Sbjct: 682 LLKDLFDRGLWDEDMKQQLIAHNGSVQYISEIPADLKELYKTVWEIKQKNIIDMAADRGA 741
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN 779
+ID SQSLNI++ +P F KL+S+HF+ W +GLKTG YYLR++AA DAIKFTVDT V K
Sbjct: 742 FIDQSQSLNIYIQKPTFAKLSSMHFYGWEKGLKTGAYYLRTQAATDAIKFTVDTQVAKNA 801
Query: 780 PKVTDDD---------------DAKMAQ-MVCSL--TNREECMAC 806
K+ + + D+ + Q +VC L N ++C+ C
Sbjct: 802 AKMKNAEPVAITREVSRETISTDSTVTQNVVCPLRRNNDDQCLMC 846
>gi|68525530|ref|XP_723625.1| ribonucleoside-diphosphate reductase large chain [Plasmodium yoelii
yoelii 17XNL]
gi|23477980|gb|EAA15190.1| ribonucleoside-diphosphate reductase large chain [Plasmodium yoelii
yoelii]
Length = 847
Score = 1064 bits (2751), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/824 (61%), Positives = 629/824 (76%), Gaps = 38/824 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+ R G++E + FD+I R+++LSYGL E DP V+Q V G+Y G+ T +LDELA
Sbjct: 42 MYVLNRKGEEEDISFDQILKRIQRLSYGLH-ELVDPARVTQGVINGMYSGIKTCELDELA 100
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
A+T A M T HPD++ LAARI NLHKNT ++ + +Y+ Y + G A LI+ +V
Sbjct: 101 AQTCAYMATTHPDFSILAARITTDNLHKNTSDDIAKVAEALYS-YKDIRGRSASLISKEV 159
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YD IM++ RL+ EI Y RDF+YDYFGFKTLERSYLL++ K++ERPQH+LMRV++GIH
Sbjct: 160 YDFIMEHKDRLNKEIDYTRDFNYDYFGFKTLERSYLLRINNKIIERPQHLLMRVSIGIHI 219
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD++ A++TYH+MSQ++FTHA+PTLFN+GTPR Q+SSCFL+ MK DSIEGI++TLK+CA+
Sbjct: 220 DDLEKALETYHLMSQKYFTHATPTLFNSGTPRPQMSSCFLLSMKSDSIEGIFETLKQCAL 279
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIGV+V +IR SYIRGTNG SNG+VPMLRVFNDTARYVDQGGGKRKG+FAVY
Sbjct: 280 ISKTAGGIGVAVQDIRGQNSYIRGTNGISNGLVPMLRVFNDTARYVDQGGGKRKGSFAVY 339
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWH+DIFEFLDLRKNHGKEE RARDLFYA+WVPDLFM+RV+ N W+L CPNE PGL+
Sbjct: 340 IEPWHSDIFEFLDLRKNHGKEELRARDLFYAIWVPDLFMKRVKENRNWTLMCPNECPGLS 399
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE+LYTKYE+E KK V AQ+LWF IL+SQIETG PYML+KD CN KSNQ+NL
Sbjct: 400 ESWGEEFEKLYTKYEEENLGKKTVLAQDLWFAILQSQIETGVPYMLYKDACNSKSNQKNL 459
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLC E+I+YTSP E AVCNLASIAL ++V + + F
Sbjct: 460 GTIKCSNLCCEIIEYTSPDEVAVCNLASIALCKFV------------------DREKKEF 501
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL ++T I+T NL+KII+ NYYP++ A +SN RHRPIGIGVQGLADTF+LL P++S
Sbjct: 502 DFKKLYDITKIITRNLDKIIERNYYPIKEAEKSNKRHRPIGIGVQGLADTFMLLRYPYES 561
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDR-WD 599
EA++LNK IFET+YY AL S E+A GPYE+Y GSP S+GILQ DMW V ++ WD
Sbjct: 562 DEAKELNKRIFETMYYAALEMSVELAQIHGPYESYKGSPASQGILQFDMWNVKVDNKYWD 621
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L+ IS +G+RNSLL+APMPTASTSQILGNNE FEPYTSNIY RRVLSGEF VVN H
Sbjct: 622 WDLLKKKISMHGLRNSLLLAPMPTASTSQILGNNESFEPYTSNIYYRRVLSGEFFVVNPH 681
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL DL + GLW +K ++I +GSVQ I +IP +LK +YKTVWEIKQK ++DMA DRG
Sbjct: 682 LLKDLFDRGLWDEDMKQQLIAHNGSVQYISEIPADLKELYKTVWEIKQKNIIDMAADRGV 741
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN 779
+ID SQSLNI++ +P F KL+S+HF+ W +GLKTG YYLR++AA DAIKFTVDT V K
Sbjct: 742 FIDQSQSLNIYIQKPTFAKLSSMHFYGWEKGLKTGAYYLRTQAATDAIKFTVDTQVAKNA 801
Query: 780 PKVTDDD---------------DAKMAQMVCSL--TNREECMAC 806
K+ + D ++ + Q C L N E C+ C
Sbjct: 802 EKLKNADGVAITREVSRETISTESTVTQNACPLRRNNDEPCLMC 845
>gi|124809244|ref|XP_001348526.1| ribonucleoside-diphosphate reductase, large subunit [Plasmodium
falciparum 3D7]
gi|23497421|gb|AAN36965.1|AE014821_52 ribonucleoside-diphosphate reductase, large subunit [Plasmodium
falciparum 3D7]
Length = 847
Score = 1063 bits (2750), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 506/824 (61%), Positives = 630/824 (76%), Gaps = 38/824 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+ R G++E + FD+I R+++LSYGL E DP V+Q V G+Y G+ T +LDELA
Sbjct: 42 MYVLNRKGEEEDISFDQILKRIQRLSYGLH-ELVDPARVTQGVINGMYSGIKTCELDELA 100
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
A+T A M T HPD++ LAARI NLHKNT +E + +Y Y + G A LI+ +V
Sbjct: 101 AQTCAYMATTHPDFSILAARITTDNLHKNTSDDVAEVAEALYT-YKDVRGRPASLISKEV 159
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YD I+ + RL+ EI Y RDF+YDYFGFKTLERSYLL++ K++ERPQH+LMRV++GIH
Sbjct: 160 YDFILLHKDRLNKEIDYTRDFNYDYFGFKTLERSYLLRINNKIIERPQHLLMRVSIGIHI 219
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDID A++TYH+MSQ++FTHA+PTLFN+GTPR Q+SSCFL+ MK DSIEGI++TLK+CA+
Sbjct: 220 DDIDKALETYHLMSQKYFTHATPTLFNSGTPRPQMSSCFLLSMKADSIEGIFETLKQCAL 279
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIGV+V +IR SYIRGTNG SNG+VPMLRVFNDTARYVDQGGGKRKG+FAVY
Sbjct: 280 ISKTAGGIGVAVQDIRGQNSYIRGTNGISNGLVPMLRVFNDTARYVDQGGGKRKGSFAVY 339
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWH+DIFEFLDLRKNHGKEE RARDLFYA+WVPDLFM+RV+ N W+L CPNE PGL+
Sbjct: 340 IEPWHSDIFEFLDLRKNHGKEELRARDLFYAVWVPDLFMKRVKENKNWTLMCPNECPGLS 399
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE+LYTKYE+E KK V AQ+LWF IL+SQIETG PYML+KD+CN KSNQ+NL
Sbjct: 400 ETWGEEFEKLYTKYEEENMGKKTVLAQDLWFAILQSQIETGVPYMLYKDSCNAKSNQKNL 459
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLC E+I+YTSP E AVCNLASIAL ++V + + F
Sbjct: 460 GTIKCSNLCCEIIEYTSPDEVAVCNLASIALCKFV------------------DLEKKEF 501
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+F+KL E+T I+T NL+KII+ NYYPV+ A+ SN RHRPIGIGVQGLADTF+LL P++S
Sbjct: 502 NFKKLYEITKIITRNLDKIIERNYYPVKEAKTSNTRHRPIGIGVQGLADTFMLLRYPYES 561
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDR-WD 599
A++LNK IFET+YY AL S E+A+ GPYE+Y GSP S+GILQ DMW ++ WD
Sbjct: 562 DAAKELNKRIFETMYYAALEMSVELASIHGPYESYQGSPASQGILQFDMWNAKVDNKYWD 621
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L+ I K+G+RNSLL+APMPTASTSQILGNNE FEPYTSNIY RRVLSGEF VVN H
Sbjct: 622 WDELKAKIRKHGLRNSLLLAPMPTASTSQILGNNESFEPYTSNIYYRRVLSGEFFVVNPH 681
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL DL + GLW +K ++I +GS+Q I +IP++LK +YKTVWEIKQK ++DMA DRG
Sbjct: 682 LLKDLFDRGLWDEDMKQQLIAHNGSIQYISEIPDDLKELYKTVWEIKQKNIIDMAADRGI 741
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN 779
+ID SQSLNI++ +P F KL+S+HF+ W +GLKTG YYLR++AA DAIKFTVDT V K
Sbjct: 742 FIDQSQSLNIYIQKPTFAKLSSMHFYGWEKGLKTGAYYLRTQAATDAIKFTVDTHVAKNA 801
Query: 780 PKVTDDD---------------DAKMAQMVCSL--TNREECMAC 806
K+ + D ++ + Q VC L N E+C+ C
Sbjct: 802 VKLKNADGVQITREVSRETISTESTVTQNVCPLRRNNDEQCLMC 845
>gi|408491218|ref|YP_006867587.1| ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Psychroflexus torquis ATCC 700755]
gi|408468493|gb|AFU68837.1| ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Psychroflexus torquis ATCC 700755]
Length = 815
Score = 1062 bits (2747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/836 (59%), Positives = 638/836 (76%), Gaps = 49/836 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+G++E V FDKITAR++KL YGL+ +P V+ +V G+Y GVTTS+LD LA
Sbjct: 1 MHVIKRNGQKEPVMFDKITARIRKLCYGLN-PLVEPAKVAMRVIEGLYDGVTTSELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE +A MT +HPDYA LAARI VSNLHKNTKKSFSE + D+Y + N R+ K+PLIADDV
Sbjct: 60 AEISATMTVSHPDYAQLAARISVSNLHKNTKKSFSEVMADLYEYVNPRNNKKSPLIADDV 119
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y +I ++ LDS IIY RDF+YDYFGFKTLERSYLLK+ GK+ ERPQHMLMRV++GIH
Sbjct: 120 YKVIEEHKDELDSRIIYSRDFNYDYFGFKTLERSYLLKLNGKIAERPQHMLMRVSLGIHG 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+D++S ++TY +MS+++FTHA+PTLFN+GTP+ Q+SSCFL+ M+DDSI+GIYDTLK+ A
Sbjct: 180 EDLESVLETYELMSKKYFTHATPTLFNSGTPKPQMSSCFLLTMQDDSIDGIYDTLKQTAR 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IS+SAGGIG+S+HNIRATGSYI GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG+FA+Y
Sbjct: 240 ISQSAGGIGLSIHNIRATGSYIAGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGSFAMY 299
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWHADIF FLDL+KNHG EE RARDLFYA+W+PDLFM+RV+ N W+L CPNE P L
Sbjct: 300 VEPWHADIFSFLDLKKNHGAEEMRARDLFYAMWIPDLFMKRVEENSTWTLMCPNECPNLY 359
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ EF+ LY KYE+E K +K ++A+ LW +IL+SQIETGTPYML+KD N+KSNQ+NL
Sbjct: 360 NVHSEEFDELYLKYEQENKGRKTIKARELWEKILESQIETGTPYMLYKDAANRKSNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++YTSP E AVCNLASIALP +V KN F
Sbjct: 420 GTIRSSNLCTEIMEYTSPDEVAVCNLASIALPMFV--------------------KNGEF 459
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
++L ++T + +NLNK+ID NYYPV+ A SN RHRP+G+G+QGLAD FI+L MPF S
Sbjct: 460 QHKELYKITKQIIKNLNKVIDRNYYPVKEAENSNFRHRPVGLGIQGLADAFIMLRMPFTS 519
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSD---R 597
EA++LN++IFET+Y+ A+ +S E+A EGPY ++ GSP+SKG Q ++WG+ +D R
Sbjct: 520 DEAKKLNQEIFETLYFAAVESSMELAKIEGPYSSFEGSPISKGEFQFNLWGLTDNDTSGR 579
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
W+W LR+ + K+GVRNSLL+APMPTASTSQILGNNE FEPYTSNIY+RRVLSGEF+VVN
Sbjct: 580 WNWSKLREKVMKHGVRNSLLMAPMPTASTSQILGNNEAFEPYTSNIYTRRVLSGEFIVVN 639
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
KHLL DL +GLW +K+ I+ +GSVQ I IP+++K +YKTVWE+ K ++DM+ R
Sbjct: 640 KHLLKDLVSLGLWDDDLKDAIMRANGSVQGIDIIPDDIKELYKTVWELSMKDIIDMSRQR 699
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL- 776
G +ID SQSLN+ M+ F KLTS+HF+AW GLKTGMYYLR+++A DAIKFT+ +
Sbjct: 700 GYFIDQSQSLNLFMEGATFAKLTSMHFYAWKSGLKTGMYYLRTKSAVDAIKFTLKSEKKE 759
Query: 777 KENP-------------------KVTDDDDAKMAQMVCSLTNREE-----CMACGS 808
KE P KV+DD ++ + +E C CGS
Sbjct: 760 KEAPSQVVQNAAKTYEEAQSQSIKVSDDSSLSPEELKALIKQSKESEDDDCEMCGS 815
>gi|401839256|gb|EJT42552.1| RNR3-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 866
Score = 1062 bits (2747), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/775 (62%), Positives = 616/775 (79%), Gaps = 15/775 (1%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG++E V FDKIT+R+ +LSYGL D V V+Q++ +GVY GVTT +LD LA
Sbjct: 1 MYVIKRDGRKEPVQFDKITSRITRLSYGLDPNRIDAVKVTQRIISGVYSGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AET A MTT HPDYA+LAAR+ +SNLHK T K FS+ I+D+++ N +G AP+I+D+V
Sbjct: 61 AETCAYMTTVHPDYATLAARVAISNLHKQTTKQFSKVIEDLHDWVNPATGKLAPMISDEV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+I+M+N L+S I+YDRDF Y YFGFKTLERSYLL++ G+V ERPQH++MRVA+GIH
Sbjct: 121 YNIVMENKDTLNSAIVYDRDFKYTYFGFKTLERSYLLRLNGEVAERPQHLVMRVALGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI+S +KTY++MS R+FTHASPTLFNAGTP Q+SSCFL+ MKDDSIEGIYDTLKECA+
Sbjct: 181 SDIESVLKTYNLMSLRYFTHASPTLFNAGTPHPQMSSCFLIAMKDDSIEGIYDTLKECAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGG+G+ ++NIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA++
Sbjct: 241 ISKTAGGVGLHINNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALF 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+F+D+RK HGKEE RARDLF ALW+PDLFM+RVQ +G W+LF P+ APGL
Sbjct: 301 LEPWHADIFDFVDIRKTHGKEEIRARDLFPALWIPDLFMKRVQEDGPWTLFSPSSAPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG EFE LYT+YE+EG+ K + AQ LW+ IL+SQ ETGTP+M++KD CN+K+NQQNL
Sbjct: 361 DVWGDEFEELYTRYEREGRGKTIT-AQKLWYAILQSQTETGTPFMVYKDACNRKTNQQNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLC E+++Y+SP ETAVCNLASIALP +V V G K +
Sbjct: 420 GTIKSSNLCCEIVEYSSPEETAVCNLASIALPAFVE-------------VAEDG-KTATY 465
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+F+ L ++ ++T NLN++ID NYYPV AR SN+RHRPI +GVQGLADT+++L +PF+
Sbjct: 466 NFQSLHDIAKVITHNLNRVIDRNYYPVPEARNSNMRHRPIALGVQGLADTYMMLRLPFEC 525
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIY+ L S E+A +EG Y T+ GSP SKGILQ DMW P WDW
Sbjct: 526 DEAQTLNKQIFETIYHATLEASCELAQKEGKYSTFEGSPSSKGILQFDMWNAKPFGMWDW 585
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I K+G+RNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +L
Sbjct: 586 ETLKKDIVKHGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W +K +I +GS++ +P +P++LK +YKTVWEI QKT+++MA DR Y
Sbjct: 646 LRDLVDLGIWDDSMKQYLITQNGSIKDLPNVPQDLKELYKTVWEISQKTIINMAADRSIY 705
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
ID S SLN+ + P+ GK+TS+HF+ W +GLKTGMYYLR++AA+ AI+FT+D V
Sbjct: 706 IDQSHSLNLFLQSPSMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQDV 760
>gi|389585613|dbj|GAB68343.1| ribonucleoside-diphosphate reductase large chain [Plasmodium
cynomolgi strain B]
Length = 837
Score = 1062 bits (2746), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/825 (60%), Positives = 629/825 (76%), Gaps = 39/825 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+ R G++E + FD+I R+++LSYGL E DP V+Q V G+Y G+ T +LDELA
Sbjct: 31 MYVLNRKGEEEDISFDQILKRIQRLSYGLH-ELVDPARVTQGVINGMYSGIKTCELDELA 89
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
A+T A M T HPD++ LAARI NLHKNT E + +Y Y + G A LI+ +V
Sbjct: 90 AQTCAYMATTHPDFSILAARITTDNLHKNTSDDIGEVAEALY-MYKDVRGRPASLISKEV 148
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+ ++++ RL+ EI Y RDF+YDYFGFKTLERSYLL++ GK++ERPQH+LMRV++GIH
Sbjct: 149 YEFMIQHKDRLNKEIDYTRDFNYDYFGFKTLERSYLLRINGKIIERPQHLLMRVSIGIHI 208
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D++ A++TYH+MSQ++FTHA+PTLFN+GTPR Q+SSCFL+CMK DSIEGI++TLK+CA+
Sbjct: 209 GDLEKALETYHLMSQKYFTHATPTLFNSGTPRPQMSSCFLLCMKSDSIEGIFETLKQCAL 268
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIGV+V +IR SYIRGTNG SNG+VPMLRVFNDTARYVDQGGGKRKG+FAVY
Sbjct: 269 ISKTAGGIGVAVQDIRGQNSYIRGTNGISNGLVPMLRVFNDTARYVDQGGGKRKGSFAVY 328
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWH+DIFEFLDLRKNHGKEE RARDLFYA+WVPDLFM+RV+ N W+L CPNE PGL+
Sbjct: 329 IEPWHSDIFEFLDLRKNHGKEELRARDLFYAVWVPDLFMKRVKENKNWTLMCPNECPGLS 388
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE+LYTKYE+E KK V AQ+LWF IL+SQIETG PYML+KD+CN KSNQ+NL
Sbjct: 389 ESWGEEFEKLYTKYEEENMGKKTVLAQDLWFAILQSQIETGVPYMLYKDSCNAKSNQKNL 448
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLC E+I+YTSP E AVCNLASIAL ++V + R F
Sbjct: 449 GTIKCSNLCCEIIEYTSPDEVAVCNLASIALCKFV------------------DVEKREF 490
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+F+KL E+T I+T NL++II+ NYYPV+ A RSN RHRPIGIGVQGLADTF+LL P++S
Sbjct: 491 NFKKLYEITKIITRNLDQIIERNYYPVQEAERSNKRHRPIGIGVQGLADTFMLLRYPYES 550
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDR-WD 599
A++LNK IFET+YY AL S E+A GPYETY GSP S+GILQ DMW V ++ W+
Sbjct: 551 DSAKELNKRIFETMYYAALEMSMELAQIYGPYETYQGSPASQGILQFDMWNVKVDNKYWN 610
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L+ I K+G+RNSLL+APMPTASTSQILGNNE FEPYTSNIY RRVLSGEF VVN H
Sbjct: 611 WDELKAKIKKHGLRNSLLLAPMPTASTSQILGNNESFEPYTSNIYYRRVLSGEFFVVNPH 670
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL DL + GLW +K ++I +GSVQ I +IP +LK +YKTVWEIKQK ++DMA DRG
Sbjct: 671 LLKDLFDRGLWDEDMKQQLIAHNGSVQYISEIPSDLKELYKTVWEIKQKNIIDMAADRGA 730
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN 779
+ID SQSLNI++ +P F KL+S+HF+ W +GLKTG YYLR++AA DAIKFTVDT V K
Sbjct: 731 FIDQSQSLNIYIQKPTFAKLSSMHFYGWEKGLKTGAYYLRTQAATDAIKFTVDTQVAKNA 790
Query: 780 PKVTDDDDAKMAQ----------------MVCSL--TNREECMAC 806
K+ + + + + +VC L N ++C+ C
Sbjct: 791 AKMKNAEGVAITREVSRETISTESTVTQNVVCPLRRNNDDQCLMC 835
>gi|365760174|gb|EHN01914.1| Rnr3p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 870
Score = 1061 bits (2745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/775 (62%), Positives = 616/775 (79%), Gaps = 15/775 (1%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG++E V FDKIT+R+ +LSYGL D V V+Q++ +GVY GVTT +LD LA
Sbjct: 1 MYVIKRDGRKEPVQFDKITSRITRLSYGLDPNRIDAVKVTQRIISGVYSGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AET A MTT HPDYA+LAAR+ +SNLHK T K FS+ I+D+++ N +G AP+I+D+V
Sbjct: 61 AETCAYMTTVHPDYATLAARVAISNLHKQTTKQFSKVIEDLHDWVNPATGKLAPMISDEV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+I+M+N L+S I+YDRDF Y YFGFKTLERSYLL++ G+V ERPQH++MRVA+GIH
Sbjct: 121 YNIVMENKDTLNSAIVYDRDFKYTYFGFKTLERSYLLRLNGEVAERPQHLVMRVALGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI+S +KTY++MS R+FTHASPTLFNAGTP Q+SSCFL+ MKDDSIEGIYDTLKECA+
Sbjct: 181 SDIESVLKTYNLMSLRYFTHASPTLFNAGTPHPQMSSCFLIAMKDDSIEGIYDTLKECAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGG+G+ ++NIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA++
Sbjct: 241 ISKTAGGVGLHINNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALF 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+F+D+RK HGKEE RARDLF ALW+PDLFM+RVQ +G W+LF P+ APGL
Sbjct: 301 LEPWHADIFDFVDIRKTHGKEEIRARDLFPALWIPDLFMKRVQEDGPWTLFSPSSAPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG EFE LYT+YE+EG+ K + AQ LW+ IL+SQ ETGTP+M++KD CN+K+NQQNL
Sbjct: 361 DVWGDEFEELYTRYEREGRGKTIT-AQKLWYAILQSQTETGTPFMVYKDACNRKTNQQNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLC E+++Y+SP ETAVCNLASIALP +V V G K +
Sbjct: 420 GTIKSSNLCCEIVEYSSPEETAVCNLASIALPAFVE-------------VAEDG-KTATY 465
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+F+ L ++ ++T NLN++ID NYYPV AR SN+RHRPI +GVQGLADT+++L +PF+
Sbjct: 466 NFQSLHDIAKVITHNLNRVIDRNYYPVPEARNSNMRHRPIALGVQGLADTYMMLRLPFEC 525
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIY+ L S E+A +EG Y T+ GSP SKGILQ DMW P WDW
Sbjct: 526 DEAQTLNKQIFETIYHATLEASCELAQKEGKYSTFEGSPSSKGILQFDMWNAKPFGMWDW 585
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I K+G+RNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +L
Sbjct: 586 ETLKKDIVKHGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W +K +I +GS++ +P +P++LK +YKTVWEI QKT+++MA DR Y
Sbjct: 646 LRDLVDLGIWDDSMKQYLITQNGSIKDLPNVPQDLKELYKTVWEISQKTIINMAADRSIY 705
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
ID S SLN+ + P+ GK+TS+HF+ W +GLKTGMYYLR++AA+ AI+FT+D V
Sbjct: 706 IDQSHSLNLFLQSPSMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQDV 760
>gi|358338264|dbj|GAA30040.2| ribonucleoside-diphosphate reductase subunit M1 [Clonorchis sinensis]
Length = 1065
Score = 1061 bits (2745), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/841 (59%), Positives = 634/841 (75%), Gaps = 53/841 (6%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
+YV+KRDG+ E VH +KI+ R++ L YGL D ++++V TG+Y GVTTS+LD LA
Sbjct: 241 IYVLKRDGRTEGVHCEKISKRIRALCYGLDESCIDIPAITRRVVTGLYPGVTTSELDNLA 300
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE A MTT H Y +LAAR+ VSNLHKNTK SFSE ++D+Y + NER+ L +P+++++V
Sbjct: 301 AEVCACMTTRHHAYGTLAARLAVSNLHKNTKASFSEAMEDLYGYVNERTKLHSPILSEEV 360
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
II +NA RL+S I Y RDF+Y+YFGFKTLERSYL K+ GKV ERPQHMLMR +VGIHK
Sbjct: 361 IKIIRENADRLNSAIDYQRDFNYNYFGFKTLERSYLFKLHGKVHERPQHMLMRASVGIHK 420
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DID+AI+TY++MS++WFTHASPTLFN+GT R Q+SSCFL+ MKDDSIEGIYDTLKECAI
Sbjct: 421 RDIDAAIETYNLMSEKWFTHASPTLFNSGTTRPQMSSCFLITMKDDSIEGIYDTLKECAI 480
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIGV++HNIR+ G+YI GTNG SNGIVPMLRVFN+TARY+DQGG KR GAFAVY
Sbjct: 481 ISKNAGGIGVNIHNIRSAGTYIAGTNGDSNGIVPMLRVFNNTARYIDQGGNKRPGAFAVY 540
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH D+ +F+++RKN G EE R RDLFYALW+PD+FM RV++N W+L P+E PGL
Sbjct: 541 LEPWHPDVLQFIEMRKNTGAEEIRGRDLFYALWIPDIFMRRVEANEDWTLMDPHECPGLP 600
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG EFE LY KYE EG+ ++ + AQ +W I+++QIETGTP+ML+KD CN+KSN Q+L
Sbjct: 601 DKWGEEFEALYLKYEAEGRGRRTLPAQEVWHSIIEAQIETGTPFMLYKDACNRKSNHQHL 660
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+ SNLCTE+I+Y+SP ETAVCNLASI+L +V +K F
Sbjct: 661 GTIRCSNLCTEIIEYSSPDETAVCNLASISLGHFV------------------DAKEHTF 702
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL VT ++T NLN++ID ++YPVE ARRSN+RHRPIGIGVQGLAD F+LL PFDS
Sbjct: 703 DFDKLQYVTRVITRNLNRVIDNSFYPVEEARRSNMRHRPIGIGVQGLADAFLLLRYPFDS 762
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDR--- 597
EA LNK IFETIY+ AL S ++A EGP+ETY G PVSKGILQPDMWGV+ +
Sbjct: 763 PEAAALNKRIFETIYFAALDASCDLAKEEGPFETYEGCPVSKGILQPDMWGVDTEELSKI 822
Query: 598 --WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVV 655
DW GLR I K GVRNSLL+APMPTAST+QILGNNE EP+TSN+YSRRVLSGEF +
Sbjct: 823 SGLDWAGLRQRIKKYGVRNSLLLAPMPTASTAQILGNNESIEPFTSNVYSRRVLSGEFQI 882
Query: 656 VNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAV 715
VN +L+ DL ++GLWS +K+ I+ + GSVQ I IP+E+KA+YKT+WE+ Q+ ++DMA
Sbjct: 883 VNPYLMDDLNKLGLWSEELKSAIVANQGSVQDIQGIPDEIKALYKTIWELSQRKIIDMAA 942
Query: 716 DRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
DRG +ID SQSLN+H+ QPN+GK+TS+HF+AW +GLKTGMYYLR+R AAD IKFT+D +
Sbjct: 943 DRGPFIDQSQSLNLHVAQPNYGKITSMHFYAWKKGLKTGMYYLRTRPAADPIKFTIDKTR 1002
Query: 776 LKENPK----------VTDDDDA--------------------KMAQMVCSLTNREECMA 805
++ + T DA M + CSL N E C++
Sbjct: 1003 VRALMERGVTVNVVNGTTGKGDAIDEQQEAEEEERIMKEIQRRNMEAITCSLKNPEGCLS 1062
Query: 806 C 806
C
Sbjct: 1063 C 1063
>gi|365981623|ref|XP_003667645.1| hypothetical protein NDAI_0A02440 [Naumovozyma dairenensis CBS 421]
gi|343766411|emb|CCD22402.1| hypothetical protein NDAI_0A02440 [Naumovozyma dairenensis CBS 421]
Length = 852
Score = 1061 bits (2744), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/775 (62%), Positives = 616/775 (79%), Gaps = 15/775 (1%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG++E V FDKITAR+ +L YGL D V V+Q++ +GVY GVTT +LD LA
Sbjct: 1 MFVIKRDGRKEPVQFDKITARISRLCYGLDPNRVDAVKVTQRIISGVYSGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AET A MTT HPDYA+LAAR+ +SNLHK T K FS+ I D++++ N +G+ +P+I+ V
Sbjct: 61 AETCAYMTTVHPDYATLAARLAISNLHKQTTKRFSQVIYDLHHYVNPLNGIPSPMISKKV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YDI+M N LDS I+YDRDF ++YFGFKTLERSYLLK+ GKV ERPQH++MRVA+GIH
Sbjct: 121 YDIVMANKDLLDSSIVYDRDFSFNYFGFKTLERSYLLKLDGKVAERPQHLIMRVALGIHL 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD++S +KTY++MS R+F HASPTLFNAGTPR Q+SSCFL+ MK+DSI+GI++TLKECA+
Sbjct: 181 DDMESVLKTYNLMSMRYFIHASPTLFNAGTPRPQMSSCFLLAMKEDSIDGIFETLKECAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HN+RATGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNVRATGSYIAGTNGTSNGLIPMVRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+F+++RKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF P++APGL
Sbjct: 301 LEPWHADIFDFIEIRKNHGKEEIRARDLFPALWIPDLFMKRVEENGQWTLFSPSDAPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EF LY +YE+EG K ++AQ LW+ IL++Q ETGTP++++KD CN+K+NQ+NL
Sbjct: 361 DVYGNEFVELYERYEREGLG-KTIKAQKLWYAILEAQTETGTPFIIYKDACNEKTNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G IKSSNLC E+++++SP ETAVCNLAS+ALP ++ S K +
Sbjct: 420 GVIKSSNLCCEIVEWSSPDETAVCNLASVALPAFIET--------------SEDGKTSTY 465
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+FEKL E++ +VT NLN++ID NYYPV A RSN+RHRPI +GVQGLADT++LL +PF+S
Sbjct: 466 NFEKLHEISKVVTYNLNRVIDNNYYPVPEAERSNVRHRPIALGVQGLADTYMLLRLPFES 525
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
A LNK IFET+Y+ +L S E+A ++GPYET+ GSP S+GILQ DMW P WDW
Sbjct: 526 EGASLLNKQIFETMYHASLEASCELAQKDGPYETFQGSPASEGILQMDMWDQEPLGMWDW 585
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I K G+RNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +L
Sbjct: 586 ETLRKDIVKYGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W +K II ++GS+Q +P +P ELKA+YKTVWEI QK ++DMA DR Y
Sbjct: 646 LRDLVDLGIWDEGMKQHIITENGSIQNLPNVPAELKALYKTVWEISQKKIIDMAADRSIY 705
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
ID S SLN+ + P GKLTS+HF+ W +GLKTGMYYLR++AA+ AI+FT+D +V
Sbjct: 706 IDQSHSLNLFLRAPTMGKLTSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQAV 760
>gi|256072094|ref|XP_002572372.1| ribonucleoside-diphosphate reductase alpha subunit [Schistosoma
mansoni]
gi|353231859|emb|CCD79214.1| putative ribonucleoside-diphosphate reductase, alpha subunit
[Schistosoma mansoni]
Length = 837
Score = 1061 bits (2743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 499/837 (59%), Positives = 632/837 (75%), Gaps = 49/837 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
+YVVKRDG+ EA+H +KIT R++ + YGL+ + D V+++V +G+Y GVTT +LD LA
Sbjct: 17 IYVVKRDGRNEAIHCEKITKRIRAMCYGLNESYIDVEAVTKRVVSGLYPGVTTVELDNLA 76
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AET A+M T H +YA LAAR+ VSNLHK TK FS+ ++D+Y + N R+ +PL++ +
Sbjct: 77 AETCASMITKHHEYAILAARLAVSNLHKETKSRFSDVVEDLYCYINPRTKKHSPLVSKSL 136
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
D + +NA RL+ I Y RD+ Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRV++GIH
Sbjct: 137 RDFVRENAGRLNDAIDYQRDYTYNYFGFKTLERSYLLKINGKVHERPQHMLMRVSIGIHT 196
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DIDSAI+TY++MS++WFTHASPTLFNAGTP+ QLSSCFL+ MKDDSIEGIYDTLKECA+
Sbjct: 197 SDIDSAIETYNLMSEKWFTHASPTLFNAGTPKPQLSSCFLITMKDDSIEGIYDTLKECAV 256
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VHNIR+ G+YI GTNG SNGIVPMLRVFN TARYVDQGG KR GAFA+Y
Sbjct: 257 ISKNAGGIGLNVHNIRSLGTYIAGTNGESNGIVPMLRVFNSTARYVDQGGNKRPGAFAMY 316
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH D+F+F+++RKN G EE RARDLF+ALW+PDLFM RV+SN W+L P+E PGL
Sbjct: 317 LEPWHPDVFQFIEMRKNTGAEEIRARDLFFALWIPDLFMRRVESNDKWTLMDPHECPGLP 376
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG +F+ LY KYE+EG+ ++ V+AQ LW+ I++ QIETG P+ML+KD+CN+KSN Q+L
Sbjct: 377 EVWGEDFDTLYEKYEREGRGRQTVKAQELWYAIIECQIETGNPFMLYKDSCNRKSNHQHL 436
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+ SNLCTE+++Y+SP ETAVCNLASI+L ++V N F
Sbjct: 437 GTIRCSNLCTEIVEYSSPDETAVCNLASISLGKFVNR------------------DNLTF 478
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL EVT +VT NLNK+IDV +YPVE ARRSN+RHRPIGIGVQGLAD F LL PFDS
Sbjct: 479 DFAKLQEVTKVVTRNLNKVIDVTFYPVEEARRSNMRHRPIGIGVQGLADAFCLLRYPFDS 538
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDR--- 597
EA LNK IFET+Y+ +L S ++A +G YE+Y GSPVSKGILQPDMWGV+ +
Sbjct: 539 PEAADLNKRIFETMYFASLDASCQLAVDQGTYESYQGSPVSKGILQPDMWGVDTEELSKV 598
Query: 598 --WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVV 655
DW GLR I+K G+RNSLL+APMPTASTSQILGNNE EP+TSN++SRRVLSGEF +
Sbjct: 599 SGLDWSGLRARINKYGLRNSLLLAPMPTASTSQILGNNESTEPFTSNVFSRRVLSGEFQI 658
Query: 656 VNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAV 715
VN +LL DLT++ LWS +K I+ + GS+Q I IP+ELK +YKTVWEI QK ++DMA
Sbjct: 659 VNPYLLDDLTKLELWSEELKTAIVLNQGSIQHIDGIPKELKPLYKTVWEISQKKIIDMAA 718
Query: 716 DRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
R +ID SQSLN+H+ QPN+GK+TS+HF+AW +GLKTGMYYLR+R AAD IKF+VD ++
Sbjct: 719 GRAPFIDQSQSLNLHLAQPNYGKITSMHFYAWRKGLKTGMYYLRTRPAADPIKFSVDKTI 778
Query: 776 LK---------ENPKVTDDDDA-----------------KMAQMVCSLTNREECMAC 806
L+ P+ D D + + CSL N E C++C
Sbjct: 779 LRVLTDSTTKTNEPQNNDSIDQTVEAIEELRIIEEIQKRNLDSIACSLNNPEGCLSC 835
>gi|323452424|gb|EGB08298.1| hypothetical protein AURANDRAFT_37557 [Aureococcus anophagefferens]
Length = 793
Score = 1059 bits (2738), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/808 (60%), Positives = 623/808 (77%), Gaps = 21/808 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M VVKR+GK+E V +DKIT+R++KL YGL ++ P ++QKV GVY GVTT +LDELA
Sbjct: 7 MQVVKRNGKKETVRYDKITSRIQKLCYGLDAKYIKPNQITQKVIQGVYDGVTTHELDELA 66
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
A+T A M T HPD++ LAARI VSNLHK+T +FS+ ++ ++ H + ++ A LI+D+
Sbjct: 67 AQTTAYMATQHPDFSVLAARISVSNLHKSTDNTFSDVVEKLHKHMHPKTKKPAALISDET 126
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y + K+ +++ I+Y+RDF+YDYFGFKTLERSYL+++ G + ERPQHM+MRVA+GIH
Sbjct: 127 YATVQKHKDAINAAIVYERDFEYDYFGFKTLERSYLMRLDGAIAERPQHMIMRVALGIHG 186
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD+ +A++TY MMSQ+ FTHA+PTLFNAGTPR QLSSCFL+ MK+DSIEGIYDTLK CA
Sbjct: 187 DDLAAALETYEMMSQKMFTHATPTLFNAGTPRPQLSSCFLLAMKEDSIEGIYDTLKRCAA 246
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+SVHNIRAT SYI G+NGTSNGIVPMLRV+NDTARYVDQGGG+RKG+FA+Y
Sbjct: 247 ISKYAGGIGLSVHNIRATDSYICGSNGTSNGIVPMLRVYNDTARYVDQGGGRRKGSFAIY 306
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADI +LDL+KNHG E RARDLFY LW+PDLFM+RV++NG WSL CPNE PGLA
Sbjct: 307 LEPWHADIETWLDLKKNHGNELERARDLFYGLWIPDLFMKRVEANGFWSLMCPNECPGLA 366
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC G EFE LY +YE EG+A+K + AQ LWF IL SQ+ETGTPYML+KD CN KSNQ++L
Sbjct: 367 DCHGAEFEALYERYEAEGRARKAIPAQQLWFAILDSQVETGTPYMLYKDACNDKSNQKHL 426
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+++YT+ E AVC LASI L +V G F
Sbjct: 427 GTIKSSNLCTEIVEYTASDEIAVCTLASINLTVHVDGAG----------------DAATF 470
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL +VT+NLNK++DVNYYPVE A+ SNL+HRP+GIGVQG+AD L P++S
Sbjct: 471 DFAKLKRTAYVVTKNLNKVVDVNYYPVEEAKSSNLKHRPVGIGVQGMADALAKLRHPYES 530
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
+A+++N+D+FETIY+ A+ S ++A GPY++Y GSP S+G+ Q D+W V PSDRWDW
Sbjct: 531 DDAKRINRDVFETIYFGAMEASIDLAQELGPYDSYAGSPTSQGLFQFDLWNVKPSDRWDW 590
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
GLR + ++G RNSLL+APMPTAST+QILGNNE FEP+TSN+Y+RRVL+GEF VVNK+L
Sbjct: 591 EGLRARLGEHGCRNSLLLAPMPTASTAQILGNNESFEPFTSNMYTRRVLAGEFAVVNKYL 650
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL +GLW+ I+N+II D GSVQ + IP++LKA+YKT WEIKQK ++DM+ DRG +
Sbjct: 651 LRDLIALGLWTSEIRNQIIADKGSVQGVLAIPDDLKALYKTTWEIKQKCVLDMSADRGAF 710
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
I SQSLN+H+ PN GKLTS+HF+AW +GLKTGMYYLR+R ADAI FTVD ++ ++
Sbjct: 711 ICQSQSLNLHVADPNPGKLTSMHFYAWKKGLKTGMYYLRTRPKADAIAFTVDQAMAAKS- 769
Query: 781 KVTDDDDAKMAQMVCSLTNREECMACGS 808
A + EC++CG+
Sbjct: 770 ----RGGAALELANGQEAEEHECLSCGA 793
>gi|323454028|gb|EGB09899.1| hypothetical protein AURANDRAFT_24558 [Aureococcus anophagefferens]
Length = 787
Score = 1058 bits (2736), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/808 (60%), Positives = 623/808 (77%), Gaps = 21/808 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M VVKR+GK+E V +DKIT+R++KL YGL ++ P ++QKV GVY GVTT +LDELA
Sbjct: 1 MQVVKRNGKKETVRYDKITSRIQKLCYGLDAKYIKPNQITQKVIQGVYDGVTTHELDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
A+T A M T HPD++ LAARI VSNLHK+T +FS+ ++ ++ H + ++ A LI+D+
Sbjct: 61 AQTTAYMATQHPDFSVLAARISVSNLHKSTDNTFSDVVEKLHKHMHPKTKKPAALISDET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y + K+ +++ I+YDRDF+YDYFGFKTLERSYL+++ G + ERPQHM+MRVA+GIH
Sbjct: 121 YATVQKHKDAINAAIVYDRDFEYDYFGFKTLERSYLMRLDGAIAERPQHMIMRVALGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD+ A +TY MMSQ+ FTHA+PTLFNAGTPR QLSSCFL+ MK+DSIEGIYDTLK CA
Sbjct: 181 DDLAGAFETYEMMSQKMFTHATPTLFNAGTPRPQLSSCFLLAMKEDSIEGIYDTLKRCAA 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+SVHNIRAT SYI G+NGTSNGIVPMLRV+NDTARYVDQGGG+RKG+FA+Y
Sbjct: 241 ISKYAGGIGLSVHNIRATDSYICGSNGTSNGIVPMLRVYNDTARYVDQGGGRRKGSFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADI +LDL+KNHG E RARDLFY LW+PDLFM+RV++NG WSL CPNE PGLA
Sbjct: 301 LEPWHADIETWLDLKKNHGNELERARDLFYGLWIPDLFMKRVEANGFWSLMCPNECPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC G EFE LY +YE EG+A+K + AQ LWF IL SQ+ETGTPYML+KD CN KSNQ++L
Sbjct: 361 DCHGAEFEALYERYEAEGRARKAIPAQQLWFAILDSQVETGTPYMLYKDACNDKSNQKHL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+++YT+ E AVC LASI L +V G F
Sbjct: 421 GTIKSSNLCTEIVEYTASDEIAVCTLASINLTVHVDGAG----------------DAATF 464
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL +VT+NLNK++DVNYYPVE A+ SNL+HRP+GIGVQG+AD L P++S
Sbjct: 465 DFAKLRRTAYVVTKNLNKVVDVNYYPVEEAKSSNLKHRPVGIGVQGMADALAKLRHPYES 524
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
+A+++N+D+FETIY+ A+ S ++A GPY++Y GSP S+G+ Q D+W V PSDRWDW
Sbjct: 525 DDAKRINRDVFETIYFGAMEASIDLAQELGPYDSYAGSPTSQGLFQFDLWNVKPSDRWDW 584
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
GLR + ++G RNSLL+APMPTAST+QILGNNE FEP+TSN+++RRVL+GEF VVNK+L
Sbjct: 585 EGLRARLGEHGCRNSLLLAPMPTASTAQILGNNESFEPFTSNMFTRRVLAGEFAVVNKYL 644
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL +GLW+ I+N+II D GSVQ + IP++LKA+YKT WEIKQK ++DM+ DRG +
Sbjct: 645 LRDLIALGLWTSEIRNQIIADKGSVQGVLAIPDDLKALYKTTWEIKQKCVLDMSADRGAF 704
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
I SQSLN+H+ PN GKLTS+HF+AW +GLKTGMYYLR+R ADAI FTVD ++ ++
Sbjct: 705 ICQSQSLNLHVADPNPGKLTSMHFYAWKKGLKTGMYYLRTRPKADAIAFTVDQAMAAKSR 764
Query: 781 KVTDDDDAKMAQMVCSLTNREECMACGS 808
+ A ++ EC++CG+
Sbjct: 765 GGAALEPANGQEL-----EEHECLSCGA 787
>gi|50290817|ref|XP_447841.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527152|emb|CAG60790.1| unnamed protein product [Candida glabrata]
Length = 894
Score = 1057 bits (2734), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/778 (62%), Positives = 620/778 (79%), Gaps = 16/778 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KR G++E V FDKITAR+ +L YGL D V V+Q++ +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRSGRKEPVKFDKITARISRLCYGLD-PRIDAVKVTQRIISGVYEGVTTVELDNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AET A MTT HPDYA+LAAR+ +SNLHK T K FS+ + ++Y++ N +G AP+I+D+V
Sbjct: 60 AETCAYMTTIHPDYATLAARVAISNLHKQTTKQFSQVVSNLYHYINPATGKHAPMISDEV 119
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y I+M N LDS I+YDRDF ++YFGFKTLERSYLL++ G+V ERPQH++MRVA+GIH
Sbjct: 120 YQIVMDNKDELDSAIVYDRDFQFNYFGFKTLERSYLLRINGEVAERPQHLIMRVALGIHG 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D+++A++TY++MS R+FTHASPTLFNAGTP Q+SSCFLV MKDDSIEGIYDTLKECA+
Sbjct: 180 RDLEAALETYNLMSLRYFTHASPTLFNAGTPHPQMSSCFLVAMKDDSIEGIYDTLKECAL 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIRATGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 240 ISKTAGGIGLHIHNIRATGSYIAGTNGTSNGLIPMVRVFNNTARYVDQGGNKRPGAFALY 299
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+F+D+RKNHGKEE RARDLF ALWVPDLFM+RV+ NG W+LF P+ APGL+
Sbjct: 300 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWVPDLFMKRVEQNGNWTLFSPSSAPGLS 359
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EFE LY +YE+EG+ K ++AQ LW+ IL++Q ETGTP+M++KD CN+KSNQ+NL
Sbjct: 360 DCYGKEFEELYERYEREGRG-KTIKAQKLWYSILEAQTETGTPFMIYKDACNEKSNQRNL 418
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G IKSSNLC E+++Y+SP ETAVCNLASIALP ++ S K +
Sbjct: 419 GVIKSSNLCCEIVEYSSPDETAVCNLASIALPAFIET--------------SEDGKTSTY 464
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+F+KL ++ ++T NLNK+ID NYYPV A+ SN+RHRPI +GVQGLADTF+LL +PFDS
Sbjct: 465 NFQKLHDIAKVITRNLNKVIDRNYYPVPEAKNSNMRHRPIALGVQGLADTFMLLRLPFDS 524
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
A +LN IFETIY+ +L S E+A ++GPY++Y GSP+SKG+ Q DMW P WDW
Sbjct: 525 EGAAKLNIQIFETIYHASLEASCELAQKDGPYQSYQGSPISKGVFQFDMWNAKPFGMWDW 584
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I K+GVRNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +L
Sbjct: 585 DALRKDILKHGVRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 644
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W +K II +GS+Q +P IP+ELK +YKTVWEI QKT+++MA DR Y
Sbjct: 645 LRDLVDLGIWDEGMKQHIITQNGSIQNLPNIPQELKDLYKTVWEISQKTIINMAADRSVY 704
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE 778
ID S SLN+ + P GK+TS+HF+ W +GLKTGMYYLR++AA+ AI+FT+D SV ++
Sbjct: 705 IDQSHSLNLFLQAPTMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQSVAQQ 762
>gi|68070011|ref|XP_676917.1| ribonucleoside-diphosphate reductase, large subunit, [Plasmodium
berghei strain ANKA]
gi|56496825|emb|CAH95342.1| ribonucleoside-diphosphate reductase, large subunit, putative
[Plasmodium berghei]
Length = 847
Score = 1057 bits (2733), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 503/824 (61%), Positives = 625/824 (75%), Gaps = 38/824 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+ R G++E V FD+I R+++LSYGL E DP V+Q V G+Y G+ T +LDELA
Sbjct: 42 MYVLNRKGEEEDVSFDQILKRIQRLSYGLH-ELVDPARVTQGVINGMYSGIKTCELDELA 100
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
A+T A M T HPD++ LAARI NLHK+T + + +Y Y + G A LI+ +V
Sbjct: 101 AQTCAYMATTHPDFSILAARITTDNLHKSTNDDIGKVAEALYT-YKDIRGRSASLISKEV 159
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YD IM++ RL+ EI Y RDF+YDYFGFKTLERSYLL++ K++ERPQH+LMRV++GIH
Sbjct: 160 YDFIMEHKDRLNKEIDYTRDFNYDYFGFKTLERSYLLRINNKIIERPQHLLMRVSIGIHI 219
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD++ A++TYH+MSQ++FTHA+PTLFN+GTPR Q+SSCFL+ MK DSIEGI++TLK+CA+
Sbjct: 220 DDLEKALETYHLMSQKYFTHATPTLFNSGTPRPQMSSCFLLSMKSDSIEGIFETLKQCAL 279
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIGV+V +IR SYIRGTNG SNG+VPMLRVFNDTARYVDQGGGKRKG+FAVY
Sbjct: 280 ISKTAGGIGVAVQDIRGQNSYIRGTNGISNGLVPMLRVFNDTARYVDQGGGKRKGSFAVY 339
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWH+DIFEFLDLRKNHGKEE RARDLFYA+WVPDLFM+RV+ N W+L CPNE PGL+
Sbjct: 340 IEPWHSDIFEFLDLRKNHGKEELRARDLFYAIWVPDLFMKRVKENKNWTLMCPNECPGLS 399
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE+LYTKYE+E KK V AQ+LWF IL+SQIETG PYML+KD CN KSNQ+NL
Sbjct: 400 ESWGDEFEKLYTKYEEENLGKKTVLAQDLWFAILQSQIETGVPYMLYKDACNSKSNQKNL 459
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLC E+I+YTSP E AVCNLASIAL ++V + + F
Sbjct: 460 GTIKCSNLCCEIIEYTSPDEVAVCNLASIALCKFV------------------DREKKEF 501
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+F+KL ++T I+T NL+KII+ NYYP++ A +SN RHRPIGIGVQGLADTF+LL P++S
Sbjct: 502 NFKKLYDITKIITRNLDKIIERNYYPIKEAEKSNKRHRPIGIGVQGLADTFMLLRYPYES 561
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDR-WD 599
EA++LNK IFET+YY AL S E+A GPYE+Y GSP S+GILQ DMW ++ WD
Sbjct: 562 DEAKELNKRIFETMYYAALEMSVELAQVHGPYESYKGSPASQGILQFDMWNAKVDNKYWD 621
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L+ IS +G+RNSLL+APMPTASTSQILGNNE FEPYTSNIY RRVLSGEF VVN H
Sbjct: 622 WDLLKKKISIHGLRNSLLLAPMPTASTSQILGNNESFEPYTSNIYYRRVLSGEFFVVNPH 681
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL DL + GLW +K ++I +GSVQ I +IP +LK +YKTVWEIKQK ++DMA DRG
Sbjct: 682 LLKDLFDRGLWDEDMKQQLIAHNGSVQYISEIPNDLKELYKTVWEIKQKNIIDMAADRGV 741
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN 779
+ID SQSLNI++ +P F KL+S+HF+ W +GLKTG YYLR++AA DAIKFTVDT V K
Sbjct: 742 FIDQSQSLNIYIQKPTFAKLSSMHFYGWEKGLKTGAYYLRTQAATDAIKFTVDTQVAKNA 801
Query: 780 PKVTDDDDAKM---------------AQMVCSL--TNREECMAC 806
K+ + + A + Q C L N E C+ C
Sbjct: 802 EKLKNAEGATITREVSRETISTESTVTQNACPLRRNNDEPCLMC 845
>gi|357612500|gb|EHJ68034.1| hypothetical protein KGM_04264 [Danaus plexippus]
Length = 780
Score = 1055 bits (2729), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/808 (62%), Positives = 628/808 (77%), Gaps = 35/808 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
+YV+KRDG+ E VH DKIT+R+KKL YGL+++ DPV ++ KV +G+Y GVTT +LD LA
Sbjct: 8 LYVLKRDGRMEEVHIDKITSRIKKLCYGLNMDFVDPVSITLKVISGIYSGVTTVELDNLA 67
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT+HPDYA LAAR+ +SNLHK TKK FS+ + D+YN N + ++P+I+D
Sbjct: 68 AETAATMTTDHPDYAILAARLAISNLHKETKKHFSDVMTDLYNIINPYTKKRSPMISDFH 127
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+IIM N RLDS I+YDRDF Y+YFGFKTLERSYLL++ KV ERPQHMLMRVA+GIH
Sbjct: 128 YEIIMNNKDRLDSAIVYDRDFKYNYFGFKTLERSYLLRINNKVAERPQHMLMRVAIGIHD 187
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DID+AI TY+++S+++FTHASPTLF+A TPR QLSSCFL+ MKDDSIEGIY
Sbjct: 188 KDIDAAINTYNLLSEKYFTHASPTLFSAATPRPQLSSCFLIGMKDDSIEGIY-------- 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
IG+ +H IRA G+YI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 240 -------IGLHIHCIRAKGTYIAGTNGISNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 292
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWH+DIFEFLDL+KN GKEE RAR+LFYALW+PDLFM+RV+ N WSL CP+ PGL
Sbjct: 293 VEPWHSDIFEFLDLKKNTGKEEVRARELFYALWIPDLFMKRVERNENWSLMCPHNCPGLY 352
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EFE LY KYE+E + + V+AQ LW I+++Q+ETGTPYML+KD CN+KSNQ+NL
Sbjct: 353 DCYGEEFEALYEKYEQENRFVRQVRAQILWKAIIEAQVETGTPYMLYKDACNRKSNQKNL 412
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YTS E AVCNLASIAL +V +N+ F
Sbjct: 413 GTIKCSNLCTEIVEYTSEDEVAVCNLASIALNMFV--------------------ENKKF 452
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EVT VT+NLNKIIDVN+YPV A+ SN++HRPIGIGVQGLAD F+L+ +P++S
Sbjct: 453 DFKKLKEVTKTVTQNLNKIIDVNFYPVPEAKNSNMKHRPIGIGVQGLADAFVLMRLPYES 512
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
+A LN+ IFETIYY AL S E+A R+G Y TY GSP S+GILQ DMW P+D WDW
Sbjct: 513 EKAILLNQQIFETIYYGALEASCELAERDGVYSTYEGSPASQGILQYDMWNKTPTDLWDW 572
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K+G+RNSLL+APMPTAST+QILGNNE FEP+TSNIY RRVLSGEF VVN HL
Sbjct: 573 AALKEKIAKHGLRNSLLLAPMPTASTAQILGNNESFEPFTSNIYQRRVLSGEFQVVNHHL 632
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLT+ LW +KN II+++GS+Q I IP++++ +YKTVWEI KT + MA DRG +
Sbjct: 633 LTDLTQADLWDEEMKNLIIHNNGSIQNIEAIPKDIRDLYKTVWEISVKTTIQMAADRGAF 692
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQS NIH+ +PN+GKLTS+HF+AW GLKTGMYYLR++ AA+AI+FTVD S +K
Sbjct: 693 IDQSQSFNIHVAEPNYGKLTSIHFYAWKMGLKTGMYYLRTKPAANAIQFTVDKSKVKITN 752
Query: 781 KVTDDDDAKMAQMVCSLTNREECMACGS 808
D+A M+ + CSL N++EC++CGS
Sbjct: 753 GNAQKDEASMSMIACSLANKDECLSCGS 780
>gi|195119233|ref|XP_002004136.1| GI18284 [Drosophila mojavensis]
gi|193914711|gb|EDW13578.1| GI18284 [Drosophila mojavensis]
Length = 771
Score = 1055 bits (2728), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/790 (61%), Positives = 625/790 (79%), Gaps = 37/790 (4%)
Query: 37 VLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSE 96
V ++ KV G+Y GV+T +LD LAAE AA++TT H DYA LAARI VSNLHK TKK FS+
Sbjct: 1 VSITLKVINGLYCGVSTQELDNLAAEIAASLTTLHADYALLAARIAVSNLHKETKKVFSD 60
Query: 97 TIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYL 156
+D++ H N+ + L +PL+++ Y+I+ N+ RL+S IIYDRDF Y+YFGFKTLERSYL
Sbjct: 61 VFEDLFKHVNKETNLPSPLVSEYHYNIVKNNSDRLNSAIIYDRDFGYNYFGFKTLERSYL 120
Query: 157 LKVQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLS 216
LK+ GK+ ERPQH+LMRVA+GIH +DIDSA++TY+++S+R+FTHASPTLF A T R QLS
Sbjct: 121 LKINGKIAERPQHLLMRVAIGIHGEDIDSAVETYNLLSERFFTHASPTLFAAATNRPQLS 180
Query: 217 SCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPML 276
SCFL+ + DSIEGI+ ++++CA+ISKSAGGIG++VH IRA G+ I GTNGTSNG+VPML
Sbjct: 181 SCFLLTIVSDSIEGIFKSVEQCAMISKSAGGIGLNVHCIRAKGTSICGTNGTSNGLVPML 240
Query: 277 RVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPD 336
RVFN+ ARYVDQGGGKR GAFA+YLEPWH+D+FEFLDL+KN GKEEHRARDLF+ALW+PD
Sbjct: 241 RVFNNVARYVDQGGGKRPGAFAIYLEPWHSDVFEFLDLKKNTGKEEHRARDLFFALWIPD 300
Query: 337 LFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKS 396
LFM+RV++N WSL CP++ PGL D WG +FE LY KYE+EG+A +V++AQ+LWF I++S
Sbjct: 301 LFMKRVEANEDWSLMCPHKCPGLPDVWGEDFENLYIKYEREGRANRVIKAQSLWFAIIES 360
Query: 397 QIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVR 456
Q+ETGTPYMLFKD+CN+KSNQQN+GTIK SNLCTE+++Y++P E AVCNLASIAL +V
Sbjct: 361 QVETGTPYMLFKDSCNRKSNQQNVGTIKCSNLCTEIVEYSAPDEIAVCNLASIALNMFV- 419
Query: 457 EMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLR 516
++ + +DF+KL +VT IVT+NLNKIID+NYYP+ A++SNLR
Sbjct: 420 ------------------TQEKSYDFKKLKDVTKIVTKNLNKIIDINYYPLPEAKKSNLR 461
Query: 517 HRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYH 576
HRPIGIGVQG AD IL+ ++S EA LN+ IFETIYY AL S E+A R+GPYETY
Sbjct: 462 HRPIGIGVQGFADALILMRYSYESREAFLLNQQIFETIYYGALEASCELAQRDGPYETYV 521
Query: 577 GSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
GSPVSKGILQ DMW +P+D WDW L+ I+++GVRNSLL+APMPTAST+QILGNNE F
Sbjct: 522 GSPVSKGILQYDMWNKSPTDLWDWNALKKSIAQHGVRNSLLIAPMPTASTAQILGNNESF 581
Query: 637 EPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELK 696
EPYTSNIY+RRVLSGEF VVN HLL DLTE+ LW +KN+II GS+Q I IP+E++
Sbjct: 582 EPYTSNIYTRRVLSGEFQVVNHHLLRDLTELDLWDDEMKNQIISSRGSIQNIESIPKEIR 641
Query: 697 AIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMY 756
+YKTVWEI K+ + MA DRG +ID SQS NIH+ +PN+GKLTS+HF++W GLKTGMY
Sbjct: 642 DLYKTVWEISVKSTIKMAADRGAFIDQSQSFNIHVAEPNYGKLTSIHFYSWKAGLKTGMY 701
Query: 757 YLRSRAAADAIKFTV-----------------DTSVLKENPKVTD-DDDAKMAQMVCSLT 798
YLR++ AA+AI+FTV +TS+ +NP +D + + +MA M+CSL
Sbjct: 702 YLRTKPAANAIQFTVNKNISVLESNGHSSFEKNTSLEVDNPSESDIERERRMADMICSLE 761
Query: 799 NREECMACGS 808
N++ C++CGS
Sbjct: 762 NKDACLSCGS 771
>gi|294941788|ref|XP_002783240.1| ribonucleoside-diphosphate reductase, large subunit, putative
[Perkinsus marinus ATCC 50983]
gi|239895655|gb|EER15036.1| ribonucleoside-diphosphate reductase, large subunit, putative
[Perkinsus marinus ATCC 50983]
Length = 792
Score = 1053 bits (2724), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/809 (63%), Positives = 634/809 (78%), Gaps = 24/809 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KR+G++ V FDKIT R++ L+ GL+ ++ D ++QKV G+Y GVTT++LD LA
Sbjct: 3 MYVIKRNGQKADVQFDKITKRIRPLTRGLNEDYVDVTQITQKVAEGIYPGVTTTELDSLA 62
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AET A M+ HPD+++LAARI VSNLHKNT +SFSET+ ++YN + R G +PL++++V
Sbjct: 63 AETCAYMSQVHPDFSTLAARIAVSNLHKNTHESFSETVTELYNITDSR-GRSSPLVSEEV 121
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRVAVGI 178
Y++++ NA +LD I YDRDFDYDYFGFKTLERSYLLK +ERPQHM+MRVAVGI
Sbjct: 122 YNLVLMNADKLDKAIDYDRDFDYDYFGFKTLERSYLLKRPSDKTCIERPQHMIMRVAVGI 181
Query: 179 HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKEC 238
H DD+D+AI+TY +MS R FTHA+PTLFN+GTP Q+SSCFL+ +K+DSIEGIYDTLK+C
Sbjct: 182 HGDDVDAAIETYALMSTRVFTHATPTLFNSGTPHPQMSSCFLLSIKEDSIEGIYDTLKQC 241
Query: 239 AIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA 298
A+ISK+AGGIGV++ IRAT SYIRGTNG SNGIVPMLRVFNDTARYVDQGGGKRKG+FA
Sbjct: 242 AMISKTAGGIGVAITGIRATESYIRGTNGFSNGIVPMLRVFNDTARYVDQGGGKRKGSFA 301
Query: 299 VYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPG 358
VYLEPWHAD+FEFLDL+KNHGKEEHRARDLFYALW+PDLFM+RV +NG W+LFCPNEAPG
Sbjct: 302 VYLEPWHADVFEFLDLKKNHGKEEHRARDLFYALWIPDLFMKRVMANGDWTLFCPNEAPG 361
Query: 359 LADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQ 418
L D +G EFE LY KYEK+G +K V+AQ+LWF+IL+SQ ETG PYML+KD+ N+KSNQ+
Sbjct: 362 LQDTYGDEFEALYEKYEKDGIGRKTVKAQSLWFKILESQQETGIPYMLYKDSANRKSNQK 421
Query: 419 NLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNR 478
NLGTI+ SNLC E+I+YTSP E AVCNLASIAL +V + K R
Sbjct: 422 NLGTIRCSNLCCEIIEYTSPDEVAVCNLASIALNMFVDK------------------KTR 463
Query: 479 YFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPF 538
+DF +L V +VT+NLNK+ID NYYPV AR+SN+RHRPIGIGVQGLAD F+L+ P+
Sbjct: 464 TYDFGRLHRVAKVVTKNLNKVIDRNYYPVPEARKSNMRHRPIGIGVQGLADAFLLMRFPY 523
Query: 539 DSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP-SDR 597
+S EA +LN DIFETIY+ A S E+A R+GPYET+ GSP S+GILQ DMW V P S R
Sbjct: 524 ESPEALKLNNDIFETIYHAACEASMELAKRDGPYETFQGSPASEGILQFDMWDVTPDSGR 583
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW L++ + KNG+RNSLL+APMPTAST+QILGNNE FEPYT NIY RRVL+GEFV VN
Sbjct: 584 WDWASLKEEVKKNGMRNSLLIAPMPTASTAQILGNNEAFEPYTQNIYVRRVLAGEFVQVN 643
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
+HL+ DL E+GLW+ IK+KII GSVQ + +IP E++A+Y+TVWEIKQK ++DMA R
Sbjct: 644 RHLVDDLMELGLWNDEIKDKIIRKKGSVQGVEEIPMEIQALYRTVWEIKQKKILDMAAGR 703
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
G YID SQSLNIHM KL+S+HF+ W GLKTG YYLR++AAADAI+FT+D +
Sbjct: 704 GPYIDQSQSLNIHMTNCTNAKLSSMHFYGWKLGLKTGQYYLRTKAAADAIQFTLDAKKVT 763
Query: 778 ENPKVTDDDDAKMAQMVCSLTNREECMAC 806
+ Q V + E C+AC
Sbjct: 764 VESPLKPRSSPLKPQYVQE--DEETCIAC 790
>gi|22164662|ref|NP_671575.1| EVM057 [Ectromelia virus]
gi|22123803|gb|AAM92361.1|AF523264_57 EVM057 [Ectromelia virus]
gi|383866777|gb|AFH54620.1| ribonucleotide reductase large subunit [Ectromelia virus]
Length = 771
Score = 1052 bits (2721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 501/806 (62%), Positives = 614/806 (76%), Gaps = 37/806 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+VVKR+G +E V FDKIT+R++KL YGL+ +H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVVKRNGCRENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA TT HPDYA LAARI VSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI+ K +L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRVAVGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI+SAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIYDTLK CA+
Sbjct: 181 WDIESAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGASNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DI FLDL+KN G EEHR RDLF ALW+PDLFM+RV +G WSL CPNE PGL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVNDDGEWSLMCPNECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFERLYT+YE+E + K +++A+ +W I++SQIETGTP++L+KD CNKKSNQQNL
Sbjct: 361 NAWGDEFERLYTQYEREKRYKNIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+IQY E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNVFV--------------IDGR------F 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL PFDS
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S E+A +EGPY+TY GS S GILQ D+W V PSD W+W
Sbjct: 521 PEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYAGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I +G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 ESLKDKIRSHGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L LTE LW+ IKN+II D GS+Q +PE++K +YKT+WEI QKT++ MA DRG +
Sbjct: 641 LRVLTERKLWNEEIKNRIIADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQS+NIH+ P++ KLTS+HF+ W GLKTGMYYLR++AA+ I+FT+D +K
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKAASSPIQFTLDKEKIK--- 756
Query: 781 KVTDDDDAKMAQMVCSLTNREECMAC 806
MVC + E C +C
Sbjct: 757 ----------PSMVC---DSEICTSC 769
>gi|20178449|ref|NP_619870.1| CPXV083 protein [Cowpox virus]
gi|20153067|gb|AAM13528.1|AF482758_79 CPXV083 protein [Cowpox virus]
Length = 771
Score = 1052 bits (2721), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/786 (63%), Positives = 610/786 (77%), Gaps = 22/786 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+ +H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA TT HPDYA LAARI VSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
D++ K +L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRVAVGIH+
Sbjct: 121 MDVVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI+SAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIYDTLK CA+
Sbjct: 181 WDIESAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNGTSNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGTSNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DI FLDL+KN G EEHR RDLF ALW+PDLFM+RV+ +G WSL CP+E PGL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG EFERLYT+YE+E + K +++A+ +W I++SQIETGTP++L+KD CNKKSNQQNL
Sbjct: 361 DVWGDEFERLYTQYEREKRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+IQY E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL PFDS
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S E+A +EGPYETY GS S GILQ D+W V PSD WDW
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYETYTGSYASNGILQYDLWNVVPSDLWDW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 ESLKDKIRSYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L LTE LW+ IKN+I+ D GS+Q +PE++K +YKT+WEI QKT++ MA DRG +
Sbjct: 641 LRVLTERKLWNEEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQS+NIH+ P++ KLTS+HF+ W GLKTGMYYLR++ A+ I+FT+D +K P
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLDKDKIKP-P 758
Query: 781 KVTDDD 786
V D +
Sbjct: 759 VVCDSE 764
>gi|325559314|gb|ADZ30689.1| ribonucleotide reductase large subunit protein [Cowpox virus]
Length = 771
Score = 1051 bits (2717), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/786 (63%), Positives = 610/786 (77%), Gaps = 22/786 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+ +H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA TT HPDYA LAARI VSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
D++ K +L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRVAVGIH+
Sbjct: 121 MDVVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI+SAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIYDTLK CA+
Sbjct: 181 WDIESAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNGTSNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGTSNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DI FLDL+KN G EEHR RDLF ALW+PDLFM+RV+ +G WSL CP+E PGL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFERLYT+YE+E + K +++A+ +W I++SQIETGTP++L+KD CNKKSNQQNL
Sbjct: 361 NVWGDEFERLYTQYEREKRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+IQY E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL PFDS
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S E+A +EGPYETY GS S GILQ D+W V PSD WDW
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYETYTGSYASNGILQYDLWNVVPSDLWDW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 ESLKDKIRSYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L LTE LW+ IKN+I+ D GS+Q +PE++K +YKT+WEI QKT++ MA DRG +
Sbjct: 641 LRVLTERKLWNEEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQS+NIH+ P++ KLTS+HF+ W GLKTGMYYLR++ A+ I+FT+D +K P
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLDKDKIKP-P 758
Query: 781 KVTDDD 786
V D +
Sbjct: 759 VVCDSE 764
>gi|294471329|gb|ADE80913.1| RR1 [Spodoptera litura NPV]
Length = 770
Score = 1050 bits (2716), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/774 (62%), Positives = 616/774 (79%), Gaps = 20/774 (2%)
Query: 2 YVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAA 61
+V+KRDG++EAV KI R++KL YGL + +P V+ +V G+Y GVTT++LD L A
Sbjct: 5 HVIKRDGRKEAVFMYKIKCRIEKLCYGLDMNFVNPTSVAVRVDQGIYSGVTTAELDNLIA 64
Query: 62 ETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVY 121
ETAAAMT +H DY+ LAAR+ VSNLHK TK SF + I DMY + ++G+K P+I++ Y
Sbjct: 65 ETAAAMTIDHSDYSLLAARLAVSNLHKETKDSFFDVIIDMYEAIDPKTGVKTPMISNFHY 124
Query: 122 DIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKD 181
+II NA RL+S I++DRDF+YDYFGFKT++RSYL K+ G VERPQ+M+MRVA+GIH +
Sbjct: 125 NIIAANAYRLNSAIVHDRDFNYDYFGFKTMQRSYLFKINGVTVERPQYMMMRVAIGIHGE 184
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAII 241
DID+AI TY++MS +FTHASPTLF+A TP+AQ+SSCFLV K+DSIEGIYDTLK+CA+I
Sbjct: 185 DIDAAIDTYNLMSNGYFTHASPTLFSAATPKAQMSSCFLVATKEDSIEGIYDTLKQCAMI 244
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SKS GGIG VHN+RA GS + G G SNG+VPMLRV+N+TARYVDQGG KR GAFAVYL
Sbjct: 245 SKSGGGIGFHVHNVRAKGSSVAGVGGASNGLVPMLRVYNNTARYVDQGGNKRPGAFAVYL 304
Query: 302 EPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLAD 361
EPWHAD+ +FLDL+KN GKEE RAR+LFYALW+PDLFM RV+++ +WSL CP ++PGLAD
Sbjct: 305 EPWHADVLDFLDLKKNTGKEEVRARELFYALWIPDLFMRRVENDSMWSLMCPMQSPGLAD 364
Query: 362 CWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG 421
C+G EF+ LY KYE+EG+ + V AQ +W I++SQ+ETGTPYML+KD+CN+KSNQ NLG
Sbjct: 365 CYGAEFDALYQKYEEEGRYVRRVHAQTMWRAIIESQVETGTPYMLYKDSCNRKSNQSNLG 424
Query: 422 TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFD 481
TIK SNLCTE+++YTS E AVCNLASIA+ ++V + GV +D
Sbjct: 425 TIKCSNLCTEIVEYTSKDEVAVCNLASIAVNKFVLQSGV-------------------YD 465
Query: 482 FEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDST 541
FEKL ++T IVT NLN+ ID N+YP+ A+ SNL++RPIGIGVQG+AD F+++ MP++S
Sbjct: 466 FEKLKKITKIVTRNLNRTIDSNWYPLPEAKVSNLKNRPIGIGVQGMADAFVMMRMPYESV 525
Query: 542 EAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMW-GVNPSDRWDW 600
A +LNK IFETIYY AL S E+AA GPYETY GSP S+G+LQ DMW V PSD WDW
Sbjct: 526 AAAELNKKIFETIYYGALEASCELAAIYGPYETYEGSPASRGVLQYDMWDNVTPSDLWDW 585
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ ISK+G+RNSLL+APMPTAST+QILGNNE FEP+TSNIY RRVLSGEF VVN+HL
Sbjct: 586 SMLKSKISKHGLRNSLLLAPMPTASTAQILGNNESFEPFTSNIYQRRVLSGEFQVVNRHL 645
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
+ DLT +GLW+ IKN II+++GSVQ+I IP E++ +YKTVWE+ +TL++MA DRG +
Sbjct: 646 VKDLTAIGLWNDTIKNLIIHNNGSVQRIESIPLEIRQLYKTVWEMSMRTLINMAADRGAF 705
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTS 774
ID SQS N++MD P++GKLTS+HF+AW GLKTGMYYLR++ AA+AI+FTVD +
Sbjct: 706 IDQSQSFNVYMDLPSYGKLTSIHFYAWKMGLKTGMYYLRTKPAANAIQFTVDKT 759
>gi|15617495|ref|NP_258291.1| RR1 [Spodoptera litura NPV]
gi|15553231|gb|AAL01709.1|AF325155_21 ribonucleotide reductase [Spodoptera litura NPV]
Length = 770
Score = 1050 bits (2715), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/774 (62%), Positives = 616/774 (79%), Gaps = 20/774 (2%)
Query: 2 YVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAA 61
+V+KRDG++EAV KI R++KL YGL + +P V+ +V G+Y GVTT++LD L A
Sbjct: 5 HVIKRDGRKEAVFMYKIKCRIEKLCYGLDMNFVNPTSVAVRVDQGIYSGVTTAELDNLIA 64
Query: 62 ETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVY 121
ETAAAMT +H DY+ LAAR+ VSNLHK TK SF + I DMY + ++G+K P+I++ Y
Sbjct: 65 ETAAAMTIDHSDYSLLAARLAVSNLHKETKDSFFDVIIDMYEAIDPKTGVKTPMISNFHY 124
Query: 122 DIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKD 181
+II NA RL+S I++DRDF+YDYFGFKT++RSYL K+ G VERPQ+M+MRVA+GIH +
Sbjct: 125 NIIAANAYRLNSAIVHDRDFNYDYFGFKTMQRSYLFKINGVTVERPQYMMMRVAIGIHGE 184
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAII 241
DID+AI TY++MS +FTHASPTLF+A TP+AQ+SSCFLV K+DSIEGIYDTLK+CA+I
Sbjct: 185 DIDAAIDTYNLMSNGYFTHASPTLFSAATPKAQMSSCFLVATKEDSIEGIYDTLKQCAMI 244
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SKS GGIG VHN+RA GS + G G SNG+VPMLRV+N+TARYVDQGG KR GAFAVYL
Sbjct: 245 SKSGGGIGFHVHNVRAKGSSVAGVGGASNGLVPMLRVYNNTARYVDQGGNKRPGAFAVYL 304
Query: 302 EPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLAD 361
EPWHAD+ +FLDL+KN GKEE RAR+LFYALW+PDLFM RV+++ +WSL CP ++PGLAD
Sbjct: 305 EPWHADVLDFLDLKKNTGKEEVRARELFYALWIPDLFMRRVENDSMWSLMCPMQSPGLAD 364
Query: 362 CWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG 421
C+G EF+ LY KYE+EG+ + V AQ +W I++SQ+ETGTPYML+KD+CN+KSNQ NLG
Sbjct: 365 CYGAEFDALYQKYEEEGRYVRRVHAQTMWRAIIESQVETGTPYMLYKDSCNRKSNQSNLG 424
Query: 422 TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFD 481
TIK SNLCTE+++YTS E AVCNLASIA+ ++V + GV +D
Sbjct: 425 TIKCSNLCTEIVEYTSKDEVAVCNLASIAVNKFVVQSGV-------------------YD 465
Query: 482 FEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDST 541
FEKL ++T IVT NLN+ ID N+YP+ A+ SNL++RPIGIGVQG+AD F+++ MP++S
Sbjct: 466 FEKLKKITKIVTRNLNRTIDSNWYPLPEAKVSNLKNRPIGIGVQGMADAFVMMRMPYESV 525
Query: 542 EAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMW-GVNPSDRWDW 600
A +LNK IFETIYY AL S E+AA GPYETY GSP S+G+LQ DMW V PSD WDW
Sbjct: 526 AAAELNKKIFETIYYGALEASCELAAIYGPYETYEGSPASRGVLQYDMWDNVTPSDLWDW 585
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ ISK+G+RNSLL+APMPTAST+QILGNNE FEP+TSNIY RRVLSGEF VVN+HL
Sbjct: 586 SMLKSKISKHGLRNSLLLAPMPTASTAQILGNNESFEPFTSNIYQRRVLSGEFQVVNRHL 645
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
+ DLT +GLW+ IKN II+++GSVQ+I IP E++ +YKTVWE+ +TL++MA DRG +
Sbjct: 646 VKDLTAIGLWNDTIKNLIIHNNGSVQRIESIPLEIRQLYKTVWEMSMRTLINMAADRGAF 705
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTS 774
ID SQS N++MD P++GKLTS+HF+AW GLKTGMYYLR++ AA+AI+FTVD +
Sbjct: 706 IDQSQSFNVYMDLPSYGKLTSIHFYAWKMGLKTGMYYLRTKPAANAIQFTVDKT 759
>gi|325558457|gb|ADZ29836.1| ribonucleotide reductase large subunit protein [Cowpox virus]
Length = 771
Score = 1050 bits (2715), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/786 (63%), Positives = 610/786 (77%), Gaps = 22/786 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+++H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNMDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA TT HPDYA LAARI VSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI+ K +L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRVAVGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI+SAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIYDTLK CA+
Sbjct: 181 WDIESAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DI FLDL+KN G EEHR RDLF ALW+PDLFM+RV+ +G WSL CP+E PGL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG EFERLYT+YE+E + K +++A+ +W I++SQIETGTP++L+KD CNKKSNQQNL
Sbjct: 361 DVWGDEFERLYTQYEREKRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+IQY E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL PFDS
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S E+A +EGPY+TY GS S GILQ D+W V PSD WDW
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWDW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 ESLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L LTE LW+ IKN+I+ D GS+Q +PE++K +YKT+WEI QKT++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQS+NIH+ P++ KLTS+HF+ W GLKTGMYYLR++ A+ I+FT+D +K P
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLDKDKIKP-P 758
Query: 781 KVTDDD 786
V D +
Sbjct: 759 VVCDSE 764
>gi|325557813|gb|ADZ29195.1| ribonucleotide reductase large subunit protein [Cowpox virus]
Length = 771
Score = 1050 bits (2714), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/786 (63%), Positives = 611/786 (77%), Gaps = 22/786 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+++H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNMDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA TT HPDYA LAARI VSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI+ K +L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRVAVGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI+SAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIYDTLK CA+
Sbjct: 181 WDIESAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNGTSNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGTSNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DI FLDL+KN G EEHR RDLF ALW+PDLFM+RV+ +G WSL CP+E PGL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG EFERLYT+YE+E + K +++A+ +W I++SQIETGTP++L+KD CNKKSNQQNL
Sbjct: 361 DVWGDEFERLYTQYEREKRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+IQY E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL PFDS
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S E+A +EGPY+TY GS S GILQ D+W V PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L LTE LW+ IKN+I+ D GS+Q +PE++K +YKT+WEI QKT++ MA DRG +
Sbjct: 641 LRVLTERKLWNEEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQS+NIH+ P++ KLTS+HF+ W GLKTGMYYLR++ A+ I+FT+D +K P
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLDKDKIKP-P 758
Query: 781 KVTDDD 786
V D +
Sbjct: 759 VVCDSE 764
>gi|90660311|gb|ABD97425.1| ribonucleotide reductase large subunit [Cowpox virus]
Length = 771
Score = 1049 bits (2712), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/787 (63%), Positives = 609/787 (77%), Gaps = 23/787 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+ +H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA TT HPDYA LAARI VSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI+ K +L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRVAVGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIYDTLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNGTSNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGTSNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DI FLDL+KN G EEHR RDLF ALW+PDLFM+RV+ +G WSL CP+E PGL
Sbjct: 301 LEPWHSDIIAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG EFERLYT+YE+E + K +++A+ +W I++SQIETGTP++L+KD CNKKSNQQNL
Sbjct: 361 DVWGDEFERLYTQYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+IQY E AVCNLAS+AL +V + F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFVID--------------------ERF 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL PFDS
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S E+A +EGPY+TY GS S GILQ D+W V PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L LTE LW+ IKN+I+ D GS+Q +PE++K +YKT+WEI QKT++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQS+NIH+ P++ KLTS+HF+ W GLKTGMYYLR++ A+ I+FT+D +K P
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLDKDKIK--P 757
Query: 781 KVTDDDD 787
V D +
Sbjct: 758 LVVCDSE 764
>gi|323308679|gb|EGA61920.1| Rnr3p [Saccharomyces cerevisiae FostersO]
Length = 887
Score = 1048 bits (2711), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/777 (62%), Positives = 610/777 (78%), Gaps = 17/777 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG +E V FDKIT+R+ +LSYGL D V V+Q++ +GVY GVTT +LD LA
Sbjct: 17 MYVIKRDGXKEPVQFDKITSRITRLSYGLDPNRIDAVKVTQRIISGVYSGVTTVELDNLA 76
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AET A MTT HPDYA+LAARI +SNLHK T K FS+ I+D+++ N +G AP+I+D++
Sbjct: 77 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVIEDLHDWINPATGKHAPMISDEI 136
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+I+M+N L+S I+YDRDF Y YFGFKTLERSYLL++ G+V ERPQH++MRVA+GIH
Sbjct: 137 YNIVMENKDTLNSAIVYDRDFQYTYFGFKTLERSYLLRLNGEVAERPQHLVMRVALGIHG 196
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI+S +KTY++MS R+FTHASPTLFNAGTP Q+SSCFL+ MKDDSIEGIYDTLKECA+
Sbjct: 197 SDIESVLKTYNLMSLRYFTHASPTLFNAGTPHPQMSSCFLIAMKDDSIEGIYDTLKECAM 256
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGG+G+ ++NIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA++
Sbjct: 257 ISKTAGGVGLHINNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALF 316
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+F+D+RK HGKEE RARDLF ALW+PDLFM+RVQ +G W+LF P+ APGL
Sbjct: 317 LEPWHADIFDFVDIRKTHGKEEIRARDLFPALWIPDLFMKRVQEDGPWTLFSPSXAPGLD 376
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLF-KDTCNKK-SNQQ 418
D WG EFE LYT+YE+EG+ K ++AQ LW+ IL++Q ETG + F KD C ++ NQQ
Sbjct: 377 DVWGDEFEELYTRYEREGRG-KTIKAQKLWYAILQAQTETGNTFPWFYKDACKQEGQNQQ 435
Query: 419 NLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNR 478
NLGTIKSSNLC E+++Y+SP ETAVCNLASIALP +V S K
Sbjct: 436 NLGTIKSSNLCCEIVEYSSPDETAVCNLASIALPAFVEV--------------SEDGKTA 481
Query: 479 YFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPF 538
++FE+L E+ ++T NLN++ID NYYPV AR SN++HRPI +GVQGLADT ++L +PF
Sbjct: 482 SYNFERLHEIAKVITHNLNRVIDRNYYPVPEARNSNMKHRPIALGVQGLADTXMMLRLPF 541
Query: 539 DSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRW 598
+S EAQ LNK IFETIY+ L S E+A +EG Y T+ GSP SKGILQ DMW P W
Sbjct: 542 ESEEAQTLNKQIFETIYHATLEASCELAQKEGKYSTFEGSPASKGILQFDMWNAKPFGMW 601
Query: 599 DWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNK 658
DW LR I K+G+RNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN
Sbjct: 602 DWETLRKDIVKHGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNP 661
Query: 659 HLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRG 718
+LL DL ++G+W +K +I +GS+Q +P +P+ELK +YKTVWEI QKT+++MA DR
Sbjct: 662 YLLRDLVDLGIWDDSMKQYLITQNGSIQGLPNVPQELKELYKTVWEISQKTIINMAADRA 721
Query: 719 CYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
YID S SLN+ + P+ GK+TS+HF+ W +GLKTGMYYLR++AA+ AI+FT+D V
Sbjct: 722 IYIDQSHSLNLFLQAPSMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQEV 778
>gi|30519447|emb|CAD90622.1| L4L protein [Cowpox virus]
Length = 771
Score = 1048 bits (2710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/787 (63%), Positives = 611/787 (77%), Gaps = 23/787 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+++H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNMDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA TT HPDYA LAARI VSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI+ K +L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRVAVGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI+SAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIYDTLK CA+
Sbjct: 181 WDIESAIETYNLLSEKWFTHASPTLFNAGTTRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNGTSNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGTSNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DI FLDL+KN G EEHR RDLF ALW+PDLFM+RV+ +G WSL CP+E PGL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG EFERLYT+YE+E + K +++A+ +W I++SQIETGTP++L+KD CNKKSNQQNL
Sbjct: 361 DVWGDEFERLYTQYEREKRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+IQY E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL PFDS
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S E+A +EGPY+TY GS S GILQ D+W V PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L LTE LW+ IKN+I+ D GS+Q +PE++K +YKT+WEI QKT++ MA DRG +
Sbjct: 641 LRVLTERKLWNEEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQS+NIH+ P++ KLTS+HF+ W GLKTGMYYLR++ A+ I+FT+D +K P
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLDKDKIK--P 757
Query: 781 KVTDDDD 787
V D +
Sbjct: 758 LVVCDSE 764
>gi|207345939|gb|EDZ72594.1| YER070Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 732
Score = 1048 bits (2709), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/747 (63%), Positives = 602/747 (80%), Gaps = 15/747 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRDG++E V FDKITAR+ +L YGL +H D V V+Q++ +GVY+GVTT +LD LA
Sbjct: 1 MYVYKRDGRKEPVQFDKITARISRLCYGLDPKHIDAVKVTQRIISGVYEGVTTIELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AET A MTT HPDYA+LAARI +SNLHK T K FS+ ++D+Y + N +G AP+I+DDV
Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVVEDLYRYVNAATGKPAPMISDDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+I+M+N +L+S I+YDRDF Y YFGFKTLERSYLL++ G+V ERPQH++MRVA+GIH
Sbjct: 121 YNIVMENKDKLNSAIVYDRDFQYSYFGFKTLERSYLLRINGQVAERPQHLIMRVALGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI++A++TY++MS ++FTHASPTLFNAGTP+ Q+SSCFLV MK+DSIEGIYDTLKECA+
Sbjct: 181 RDIEAALETYNLMSLKYFTHASPTLFNAGTPKPQMSSCFLVAMKEDSIEGIYDTLKECAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIR+TGSYI GTNGTSNG++PM+RVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYVDQGGNKRPGAFALY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+F+D+RKNHGKEE RARDLF ALW+PDLFM+RV+ NG W+LF P APGL+
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEENGTWTLFSPTSAPGLS 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EFE LYT+YEKEG+ K ++AQ LW+ IL++Q ETGTP++++KD CN+KSNQ+NL
Sbjct: 361 DCYGDEFEALYTRYEKEGRG-KTIKAQKLWYSILEAQTETGTPFVVYKDACNRKSNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G IKSSNLC E+++Y++P ETAVCNLAS+ALP ++ S K +
Sbjct: 420 GVIKSSNLCCEIVEYSAPDETAVCNLASVALPAFIET--------------SEDGKTSTY 465
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+F+KL E+ +VT NLN++ID NYYPVE AR+SN+RHRPI +GVQGLADTF+LL +PFDS
Sbjct: 466 NFKKLHEIAKVVTRNLNRVIDRNYYPVEEARKSNMRHRPIALGVQGLADTFMLLRLPFDS 525
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+ LN IFETIY+ ++ S E+A ++GPYET+ GSP S+GILQ DMW P WDW
Sbjct: 526 EEARLLNIQIFETIYHASMEASCELAQKDGPYETFQGSPASQGILQFDMWDQKPYGMWDW 585
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I K+G+RNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF VVN +L
Sbjct: 586 DTLRKDIMKHGIRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQVVNPYL 645
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W +K +I +GS+Q +P +P+ELK +YKTVWEI QKT+++MA DR Y
Sbjct: 646 LRDLVDLGIWDEGMKQYLITQNGSIQGLPNVPQELKDLYKTVWEISQKTIINMAADRSVY 705
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAW 747
ID S SLN+ + P GKLTS+HF+ W
Sbjct: 706 IDQSHSLNLFLRAPTMGKLTSMHFYGW 732
>gi|294871762|ref|XP_002766029.1| ribonucleoside-diphosphate reductase large chain, putative
[Perkinsus marinus ATCC 50983]
gi|239866594|gb|EEQ98746.1| ribonucleoside-diphosphate reductase large chain, putative
[Perkinsus marinus ATCC 50983]
Length = 1504
Score = 1047 bits (2708), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 511/784 (65%), Positives = 626/784 (79%), Gaps = 23/784 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KR+G++ V FDKIT R++ L+ GL+ ++ D ++QKV G+Y GVTT++LD LA
Sbjct: 3 MYVIKRNGQKADVQFDKITKRIRPLTRGLNEDYVDVTQITQKVAEGIYPGVTTTELDSLA 62
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AET A M+ HPD+++LAARI VSNLHKNT +SFSETI ++YN + R G +PL++++V
Sbjct: 63 AETCAYMSQVHPDFSTLAARIAVSNLHKNTHESFSETITELYNITDSR-GRSSPLVSEEV 121
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRVAVGI 178
Y+I+ NA +LD I YDRDFDYDYFGFKTLERSYLLK +ERPQHM+MRVAVGI
Sbjct: 122 YNIVKMNADKLDKAIDYDRDFDYDYFGFKTLERSYLLKRPSDKTCIERPQHMIMRVAVGI 181
Query: 179 HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKEC 238
H DD+D+AI+TY +MS R FTHA+PTLFN+GTP Q+SSCFL+ +K+DSIEGIYDTLK+C
Sbjct: 182 HGDDVDAAIETYALMSTRVFTHATPTLFNSGTPHPQMSSCFLLSIKEDSIEGIYDTLKQC 241
Query: 239 AIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA 298
A+ISK+AGGIGV++ IRAT SYIRGTNG SNGIVPMLRVFNDTARYVDQGGGKRKG+FA
Sbjct: 242 AMISKTAGGIGVAITGIRATESYIRGTNGFSNGIVPMLRVFNDTARYVDQGGGKRKGSFA 301
Query: 299 VYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPG 358
VYLEPWHAD+FEFLDL+KNHGKEEHRARDLFYALW+PDLFM+RV +NG W+LFCPNEAPG
Sbjct: 302 VYLEPWHADVFEFLDLKKNHGKEEHRARDLFYALWIPDLFMKRVMANGDWTLFCPNEAPG 361
Query: 359 LADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQ 418
L D +G EFE LY KYEK+G +K V+AQ+LWF+IL+SQ ETG PYML+KD+ N+KSNQ+
Sbjct: 362 LQDTYGEEFEALYEKYEKDGIGRKTVKAQSLWFKILESQQETGIPYMLYKDSANRKSNQK 421
Query: 419 NLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNR 478
NLGTI+ SNLC E+I+YTS E AVCNLASIAL +V + K R
Sbjct: 422 NLGTIRCSNLCCEIIEYTSSDEVAVCNLASIALNMFVDK------------------KTR 463
Query: 479 YFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPF 538
+DF++L V +VT+NLNK+ID NYYPV AR+SN+RHRPIGIGVQGLAD F+L+ P+
Sbjct: 464 TYDFDRLHRVAKVVTKNLNKVIDRNYYPVPEARKSNMRHRPIGIGVQGLADAFLLMRYPY 523
Query: 539 DSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP-SDR 597
+S EA +LN DIFETIY+ A S E+A R+GPYET+ GSP S+GILQ DMW V P S R
Sbjct: 524 ESPEALKLNNDIFETIYHAACEASMELAKRDGPYETFQGSPASEGILQFDMWDVIPDSGR 583
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW L++ I KNG+RNSLL+APMPTAST+QILGNNE FEPYT NIY RRVL+GEFV VN
Sbjct: 584 WDWASLKEEIKKNGMRNSLLIAPMPTASTAQILGNNEAFEPYTQNIYVRRVLAGEFVQVN 643
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
+HL+ DL E+GLW+ IK+KII GSVQ + +IP E++ +YKTVWEIKQK ++DMA R
Sbjct: 644 RHLVDDLMELGLWNDEIKDKIIRKKGSVQGVEEIPSEIQDLYKTVWEIKQKKILDMAAGR 703
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDT-SVL 776
G YID SQSLNIHM KL+S+HF+ W GLKTG YYLR++AAADAI+FT+D V
Sbjct: 704 GPYIDQSQSLNIHMTNCTNAKLSSMHFYGWKLGLKTGQYYLRTKAAADAIQFTLDAKKVT 763
Query: 777 KENP 780
E+P
Sbjct: 764 VESP 767
>gi|325558027|gb|ADZ29408.1| ribonucleotide reductase large subunit protein [Cowpox virus]
Length = 771
Score = 1047 bits (2707), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/786 (62%), Positives = 610/786 (77%), Gaps = 22/786 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+++H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNMDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA TT HPDYA LAARI VSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI+ K +L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRVAVGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI+SAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIYDTLK CA+
Sbjct: 181 WDIESAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNGTSNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGTSNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DI FLDL+KN G EE+R RDLF ALW+PDLFM+RV+ +G WSL CP+E PGL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEYRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFERLYT+YE+E + K +++A+ +W I++SQIETGTP++L+KD CNKKSNQQNL
Sbjct: 361 NVWGDEFERLYTQYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+IQY E AVCNLAS+AL +V + F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFVID--------------------ERF 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL PFDS
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S E+A +EGPYETY GS S GILQ D+W V PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYETYTGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L LTE LW+ IKN+I+ D GS+Q +PE++K +YKT+WEI QKT++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQS+NIH+ P++ KLTS+HF+ W GLKTGMYYLR++ A+ I+FT+D +K P
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLDKDKIKP-P 758
Query: 781 KVTDDD 786
V D +
Sbjct: 759 VVCDSE 764
>gi|325558243|gb|ADZ29623.1| ribonucleotide reductase large subunit protein [Cowpox virus]
Length = 771
Score = 1046 bits (2706), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/786 (62%), Positives = 609/786 (77%), Gaps = 22/786 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+++H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNMDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA TT HPDYA LAARI VSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI+ K +L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRVAVGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIYDTLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DI FLDL+KN G EEHR RDLF ALW+PDLFM+RV+ +G WSL CP+E PGL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFERLYT YE+E + K +++A+ +W I++SQIETGTP++L+KD CNKKSNQQNL
Sbjct: 361 NVWGDEFERLYTLYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+IQY E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL PFDS
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S E+A +EGPYETY GS S GILQ D+W + PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYETYTGSYASNGILQYDLWNIVPSDLWNW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 581 ESLKDKIRSYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQIVNPHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L LTE LW+ IKN+I+ D GS+Q +PE++K +YKT+WEI QKT++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQS+NIH+ P++ KLTS+HF+ W GLKTGMYYLR++ A+ I+FT+D +K P
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLDKDKIKP-P 758
Query: 781 KVTDDD 786
V D +
Sbjct: 759 VVCDSE 764
>gi|325559101|gb|ADZ30477.1| ribonucleotide reductase large subunit protein [Cowpox virus]
Length = 771
Score = 1046 bits (2705), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/777 (63%), Positives = 604/777 (77%), Gaps = 21/777 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+ +H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA TT HPDYA LAARI VSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
D++ K +L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRVAVGIH+
Sbjct: 121 MDVVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIYDTLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DI FLDL+KN G EEHR RDLF ALW+PDLFM+RV+ +G WSL CP+E PGL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFERLYT+YE+E + K ++ A+ +W I++SQIETGTP++L+KD CNKKSNQQNL
Sbjct: 361 NVWGDEFERLYTQYERERRYKSIINARVIWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+IQY E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL PFDS
Sbjct: 461 DFFKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S E+A +EGPYETY GS S GILQ D+W + PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYETYTGSYASNGILQYDLWNIVPSDLWNW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 ESLKDKIRSYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L LTE LW+ IKN+I+ D GS+Q +PE++K +YKT+WEI QKT++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
ID SQS+NIH+ P++ KLTS+HF+ W GLKTGMYYLR++ A+ I+FT+D +K
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLDKDKIK 756
>gi|156083304|ref|XP_001609136.1| ribonucleoside-diphosphate reductase large chain [Babesia bovis
T2Bo]
gi|154796386|gb|EDO05568.1| ribonucleoside-diphosphate reductase large chain [Babesia bovis]
Length = 838
Score = 1045 bits (2703), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/797 (61%), Positives = 610/797 (76%), Gaps = 21/797 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+ R G+ E VHFD+I R++KLS+GL D V+Q V G+Y G+ TSQLDELA
Sbjct: 28 MFVINRKGESEEVHFDRILERIRKLSFGLH-SLVDAPRVTQSVINGMYSGIRTSQLDELA 86
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
A+T A M HPDY+ LAARIVV NLHKNT ++++ I ++ Y A LI+++V
Sbjct: 87 AQTCAYMAATHPDYSKLAARIVVDNLHKNTLDNYADVITALFK-YKYIYDSNASLISEEV 145
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YD IM N R+++EI Y RDF YDYFG KTLERSYLL++ K+VERPQHMLMRV+ GIH
Sbjct: 146 YDFIMANIDRINAEIDYSRDFQYDYFGLKTLERSYLLRINDKIVERPQHMLMRVSAGIHT 205
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI+ I+TYH+MSQ++FTHA+PTLF +GTPR Q+SSCFL+ MKDDS+ GI++TL +CA
Sbjct: 206 GDIERTIQTYHLMSQKYFTHATPTLFFSGTPRPQMSSCFLLDMKDDSLAGIFETLTQCAF 265
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG++ H IRA+G+YIRGTNG SNG+VPMLR+FN TARYVDQGGGKRKG+FA+Y
Sbjct: 266 ISKCAGGIGLACHKIRASGAYIRGTNGKSNGLVPMLRIFNSTARYVDQGGGKRKGSFAIY 325
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADI +FLDLRKNHG EE RARDLFYALW+PDLFM+RV+SNG W+L CP+E GL
Sbjct: 326 LEPWHADIMDFLDLRKNHGAEEARARDLFYALWIPDLFMKRVESNGDWTLMCPDECRGLY 385
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG EFE LYTKYE EG +K + AQ LWF IL+SQIETG P+ML+KD CN KSNQQNL
Sbjct: 386 DVWGDEFEALYTKYEMEGLGRKTIPAQTLWFAILQSQIETGNPFMLYKDACNAKSNQQNL 445
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLC E++QYTSP E AVCNLASIALP YV + +N+ +
Sbjct: 446 GTIKSSNLCCEIVQYTSPEEVAVCNLASIALPMYVDK------------------ENKTY 487
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL +V ++T NLNK+ID NYYPV A+ SN RHRPIG+GVQGLADTF+L+ PF+S
Sbjct: 488 DFKKLYDVARVITYNLNKVIDRNYYPVPEAKVSNHRHRPIGVGVQGLADTFMLMRYPFES 547
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDR-WD 599
EA++LN+ IFETIYY L S +A + G YE+Y GSP S+G LQ D+WG ++ WD
Sbjct: 548 EEAKELNRRIFETIYYGCLDESISLAEKYGTYESYPGSPASQGKLQFDLWGATVDNKLWD 607
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W GL+ ++K+G+RNSL +APMPTASTSQILGNNE FEPYTSNIY RRVLSGEF VVN H
Sbjct: 608 WDGLKQRMAKHGLRNSLFLAPMPTASTSQILGNNESFEPYTSNIYYRRVLSGEFFVVNPH 667
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL DL ++GLW +K K+I +GS++ I IP+ +K +YKTVWEIKQK+++DMA DRG
Sbjct: 668 LLRDLVDLGLWDDAMKEKLIAYNGSLRHIEGIPQHIKDLYKTVWEIKQKSIIDMAADRGI 727
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN 779
+ID SQSLNI++DQP FGKLTS+HF+ W +GLKTG YYLR++AA DAIKFTVDTSV +
Sbjct: 728 FIDQSQSLNIYLDQPTFGKLTSMHFYGWKKGLKTGTYYLRTQAATDAIKFTVDTSVSQMA 787
Query: 780 PKVTDDDDAKMAQMVCS 796
+ AK V +
Sbjct: 788 KATSQQQRAKATDGVST 804
>gi|393909613|gb|EFO27839.2| ribonucleoside-diphosphate reductase large subunit [Loa loa]
Length = 1048
Score = 1045 bits (2703), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/785 (62%), Positives = 607/785 (77%), Gaps = 19/785 (2%)
Query: 2 YVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAA 61
YVVKRDG+ EAV FDKI R+ KL YGLS + D + +SQKV G+YKGVTT +LD LAA
Sbjct: 12 YVVKRDGRHEAVSFDKIARRIMKLCYGLSQDRVDHIEISQKVIAGLYKGVTTVELDNLAA 71
Query: 62 ETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVY 121
E AA M T HPDYA+LA+RI VSNLHK T+K FS+ K +YN + +SG PLI+ +++
Sbjct: 72 EIAADMITKHPDYATLASRIAVSNLHKKTEKLFSKVSKRLYNATHPKSGRHMPLISKNIF 131
Query: 122 DIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKD 181
DII NA LDS II++RDF Y YFG KTLERSYLL++ G++ ERPQHMLMRVA+GIH D
Sbjct: 132 DIIQNNADILDSAIIHERDFCYTYFGLKTLERSYLLQINGELAERPQHMLMRVALGIHGD 191
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAII 241
+I++A++TY++MS+RWFTHA+PTLFN+GT Q+SSCFL+ M DDSIEGI++TLK+CA+I
Sbjct: 192 NIEAALETYNLMSERWFTHATPTLFNSGTCTPQMSSCFLLTMFDDSIEGIFETLKKCALI 251
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SKSAGGIG++VH IRATGS I GTNG SNG+VPMLRVFN+ ARYVDQGG KR GAFAVYL
Sbjct: 252 SKSAGGIGLNVHCIRATGSAIAGTNGVSNGLVPMLRVFNNAARYVDQGGNKRPGAFAVYL 311
Query: 302 EPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLAD 361
EPWHADIF+FL+LRKN G E R RDLF+ LWVPDLFMERV+ + +WSL CP E PGL D
Sbjct: 312 EPWHADIFDFLELRKNVGDELERCRDLFFGLWVPDLFMERVRDDKVWSLMCPAECPGLED 371
Query: 362 CWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG 421
WG FE+LY +YE+EG+ +K V A+ LW I+ +QIETG PYM++KDTCN+K+NQQNLG
Sbjct: 372 SWGEAFEKLYMQYEEEGRYRKQVPARKLWETIVSTQIETGMPYMVYKDTCNRKTNQQNLG 431
Query: 422 TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFD 481
TIK SNLCTEV+ Y+S E AVCNLASIAL R+V S FD
Sbjct: 432 TIKCSNLCTEVVLYSSREEIAVCNLASIALSRFV-------------------SSEMTFD 472
Query: 482 FEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDST 541
F+ L E+T +V NLNK+ID NYYPV A RSN RHRPIGIGVQGLAD FIL+ PF S
Sbjct: 473 FKMLREITKVVVRNLNKVIDRNYYPVPEAERSNKRHRPIGIGVQGLADAFILMRYPFTSE 532
Query: 542 EAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWG 601
+A+ LNK IFET+YY AL S E+A +GPYE+Y SPVS+GILQ DMWGV P+++WDW
Sbjct: 533 KARDLNKRIFETMYYAALEASCELAMEQGPYESYERSPVSRGILQFDMWGVTPTNQWDWE 592
Query: 602 GLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
LR I+ G+RNSLL+APMPTAST+QILGNNE EPYTSN+Y+R VLSG F V N HL+
Sbjct: 593 TLRKKIAMYGIRNSLLLAPMPTASTAQILGNNESIEPYTSNVYTRNVLSGSFQVFNMHLM 652
Query: 662 HDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYI 721
+DL + LW +K +II + GS++ I +IP+E++ +YKTVWE+ Q+ ++DMAVDRG +I
Sbjct: 653 NDLMRLDLWDDDMKLEIIKNKGSIRNIERIPQEIRDLYKTVWEMSQRDIIDMAVDRGAFI 712
Query: 722 DHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPK 781
DHSQSLNI + +PN+G +TS+HF+ W +GLKTGMYYLR+R A DA++FTVD + LK+
Sbjct: 713 DHSQSLNIFIARPNYGNITSMHFYGWQKGLKTGMYYLRTRPAVDAVQFTVDKTRLKDYAN 772
Query: 782 VTDDD 786
DD
Sbjct: 773 ANADD 777
>gi|325558674|gb|ADZ30052.1| ribonucleotide reductase large subunit protein [Cowpox virus]
Length = 771
Score = 1045 bits (2702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/786 (62%), Positives = 608/786 (77%), Gaps = 22/786 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+ +H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA TT HPDYA LAARI VSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI+ K +L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRVAVGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIYDTLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNGTSNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGTSNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DI FLDL+KN G EEHR RDLF ALW+PDLFM+RV+ +G WSL CP+E PGL
Sbjct: 301 LEPWHSDIIAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D G EFERLYT+YE+E + K +++A+ +W I++SQIETGTP++L+KD CNKKSNQQNL
Sbjct: 361 DVCGDEFERLYTQYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+IQY E AVCNLAS+AL +V + F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFVID--------------------ERF 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL PFDS
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S E+A +EGPY+TY GS S GILQ D+W + PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNIVPSDLWNW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 581 ESLKDKIRSYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQIVNPHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L LTE LW+ IKN+I+ D GS+Q +PE++K +YKT+WEI QKT++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQS+NIH+ P++ KLTS+HF+ W GLKTGMYYLR++ A+ I+FT+D +K P
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLDKDKIKP-P 758
Query: 781 KVTDDD 786
V D +
Sbjct: 759 VVCDSE 764
>gi|397567645|gb|EJK45703.1| hypothetical protein THAOC_35666, partial [Thalassiosira oceanica]
Length = 872
Score = 1045 bits (2702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/797 (60%), Positives = 612/797 (76%), Gaps = 38/797 (4%)
Query: 37 VLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFS- 95
++SQKV GVY GVTT +LDELAA+TAA+ T HPDYA LAARI VSNLHK T+K FS
Sbjct: 89 AVISQKVIQGVYPGVTTVELDELAAQTAASFATQHPDYAVLAARIEVSNLHKETEKQFSK 148
Query: 96 ----ETIKDMYNHYNE-RSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKT 150
E D + +Y ++G APL++++V+ ++M N LD I++DRDF++DYFGFKT
Sbjct: 149 VRPTEICGDCFRNYTHPKTGEPAPLVSEEVHSVVMANRDVLDGAILHDRDFEFDYFGFKT 208
Query: 151 LERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGT 210
LE+SYLLK+ G++ ERPQH+LMRVAVGIH DI+ ++TY+++SQR+FTHA+PTLFNAGT
Sbjct: 209 LEKSYLLKMHGQIAERPQHLLMRVAVGIHMGDIERVLETYNLLSQRFFTHATPTLFNAGT 268
Query: 211 PRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSN 270
P Q+SSCFL C+++DSI+GIYDTLK CA+ISK AGGIG+S+ N+RA+ SYIRGTNGTSN
Sbjct: 269 PNPQMSSCFLTCVREDSIDGIYDTLKNCAVISKYAGGIGLSISNVRASASYIRGTNGTSN 328
Query: 271 GIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFY 330
GIVPMLRVFN+TARYVDQGGGKRKG+ A Y+EPWHADIF FLDLRKNHG E RARDLFY
Sbjct: 329 GIVPMLRVFNNTARYVDQGGGKRKGSIAAYIEPWHADIFAFLDLRKNHGNEMERARDLFY 388
Query: 331 ALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLW 390
ALW+PDLFMERVQ+NG W+L CPNE GL CWG EF+ LY KYE EGK +K ++AQ LW
Sbjct: 389 ALWIPDLFMERVQTNGDWTLMCPNECKGLDTCWGAEFKALYEKYEAEGKGRKTIKAQQLW 448
Query: 391 FEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIA 450
F IL SQ+ETGTPYML+KD CN KSNQQNLGTIK SNLCTE+++YT P E AVCNLASI+
Sbjct: 449 FAILDSQVETGTPYMLYKDHCNGKSNQQNLGTIKCSNLCTEIVEYTCPDEIAVCNLASIS 508
Query: 451 LPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETA 510
L ++V P+ G S FD ++L ++ +VT+NLN++ID N+YPVE A
Sbjct: 509 LSKFVT---------PADGFGGDAS----FDLDQLMYISKVVTKNLNRVIDNNFYPVEEA 555
Query: 511 RRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREG 570
RRSN RHRPIGIGVQGLAD F ++ +PF+S +A++LNKDIFETIY+ A S E+A EG
Sbjct: 556 RRSNTRHRPIGIGVQGLADAFQMMKLPFESEQARKLNKDIFETIYFGACEASMELAEAEG 615
Query: 571 PYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQIL 630
YET+ GSP S+G LQ DMWGV PSDRWDW GL++ I+++G+RNSLL+APMPTAST+QIL
Sbjct: 616 HYETFPGSPASEGRLQFDMWGVTPSDRWDWAGLKEKIARHGMRNSLLMAPMPTASTAQIL 675
Query: 631 GNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQ 690
GNNE EP+TSN+Y+RRVL+GEF VVNKHLL DLT G W+ ++NKII D GS+Q + +
Sbjct: 676 GNNESTEPFTSNMYNRRVLAGEFTVVNKHLLRDLTANGYWTERVRNKIIADGGSIQNVQE 735
Query: 691 IPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRG 750
+P+E++ IYKTVWEI Q+ ++DMA DRG +I SQS+N+H+ +PN KLTS+HF+AW +G
Sbjct: 736 LPKEIRDIYKTVWEIPQRAILDMAADRGAFICQSQSMNVHIGEPNTSKLTSMHFYAWKKG 795
Query: 751 LKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAKMAQMVCSLT------------ 798
LKTGMYYLR+R ADAI+FTV+ +L E + K A+ S +
Sbjct: 796 LKTGMYYLRTRPKADAIQFTVNQEMLAETNNAAEKGKMKKAESPTSASANLDKPTVASKF 855
Query: 799 -------NREECMACGS 808
+ EEC+ CG+
Sbjct: 856 AGLQMKDDEEECLNCGA 872
>gi|373448219|gb|AEY73601.1| ribonucleotide reductase large subunit [Vaccinia virus]
Length = 771
Score = 1045 bits (2702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/787 (62%), Positives = 609/787 (77%), Gaps = 23/787 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+ +H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA TT HPDYA LAARI VSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI+ K +L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRVAVGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIYDTLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRRQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DI FLDL+KN G EEHR RDLF ALW+PDLFM+RV+ +G WSL CP+E PGL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFERLYT+YE+E + K +++A+ +W I++SQIETGTP++L+KD CNKKSNQQNL
Sbjct: 361 NVWGDEFERLYTQYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+IQY E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL PFDS
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S E+A +EGPY+TY GS S GILQ D+W V PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L LTE LW+ IKN+I+ D GS+Q +PE++K +YKT+WEI QKT++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQS+NIH+ P++ KLTS+HF+ W GLKTGMYYLR++ A+ I+FT+D +K P
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLDKDKIK--P 757
Query: 781 KVTDDDD 787
V D +
Sbjct: 758 LVVCDSE 764
>gi|325558889|gb|ADZ30266.1| ribonucleotide reductase large subunit protein [Cowpox virus]
Length = 771
Score = 1045 bits (2702), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/787 (62%), Positives = 609/787 (77%), Gaps = 23/787 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+++H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNMDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA TT HPDYA LAARI VSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI+ K +L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRVAVGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIYDTLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DI FLDL+KN G EEHR RDLF ALW+PDLFM+RV+ +G WSL CP+E PGL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFERLYT YE+E + K +++A+ +W I++SQIETGTP++L+KD CNKKSNQQNL
Sbjct: 361 NVWGDEFERLYTLYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+IQY E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL PFDS
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S E+A +EGPYETY GS S GILQ D+W V PSD W+W
Sbjct: 521 PEAQDLNKKIFETIYYGALEASCELAEKEGPYETYTGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQIVNPHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L LTE LW+ IKN+I+ D GS+Q +PE++K +YKT+WEI QKT++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQS+NIH+ P++ KLTS+HF+ W GLKTGMYYLR++ A+ I+FT+D +K P
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLDKDKIK--P 757
Query: 781 KVTDDDD 787
V D +
Sbjct: 758 LVVCDSE 764
>gi|19718013|gb|AAG37538.1| CMP70L [Camelpox virus CMS]
Length = 771
Score = 1045 bits (2701), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/787 (62%), Positives = 608/787 (77%), Gaps = 23/787 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+ +H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA TT HPDYA +AARI VSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAIIAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
D++ K +L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRVAVGIH+
Sbjct: 121 MDVVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIYDTLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNGTSNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGTSNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DI FLDL+KN G EEHR RDLF ALW+PDLFM+RV+ +G WSL CP+E PGL
Sbjct: 301 LEPWHYDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFERLYT YE+E + K +++A+ +W I++SQIETGTP++L+KD CNKKSNQQNL
Sbjct: 361 NVWGDEFERLYTLYEREKRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+IQY E AVCNLAS+AL +V + F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFVID--------------------ERF 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLADTFILL PFDS
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADTFILLNYPFDS 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S E+A +EGPY+TY GS S GILQ D+W V PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L LTE LW+ IKN+I+ D GS+Q +PE++K +YKT+WEI QKT++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQS+NIH+ P++ KLTS+HF+ W GLKTGMYYLR++ A+ I+FT+D +K P
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLDKDKIK--P 757
Query: 781 KVTDDDD 787
V D +
Sbjct: 758 LVVCDSE 764
>gi|373447735|gb|AEY73119.1| ribonucleotide reductase large subunit [Vaccinia virus]
gi|373449644|gb|AEY75020.1| ribonucleotide reductase large subunit [Vaccinia virus]
Length = 771
Score = 1044 bits (2700), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/787 (62%), Positives = 609/787 (77%), Gaps = 23/787 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+ +H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA TT HPDYA LAARI VSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI+ K +L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRVAVGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIYDTLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DI FLDL+KN G EEHR RDLF ALW+PDLFM+RV+ +G WSL CP+E PGL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFERLYT+YE+E + K +++A+ +W I++SQIETGTP++L+KD CNKKSNQQNL
Sbjct: 361 NVWGDEFERLYTQYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+IQY E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL PFDS
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S E+A +EGPY+TY GS S GILQ D+W V PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L LTE LW+ IKN+I+ D GS+Q +PE++K +YKT+WEI QKT++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQS+NIH+ P++ KLTS+HF+ W GLKTGMYYLR++ A+ I+FT+D +K P
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLDKDKIK--P 757
Query: 781 KVTDDDD 787
V D +
Sbjct: 758 LVVCDSE 764
>gi|113195253|ref|YP_717383.1| ribonucleotide reductase large subunit [Taterapox virus]
gi|90660529|gb|ABD97642.1| ribonucleotide reductase large subunit [Taterapox virus]
Length = 771
Score = 1044 bits (2700), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/787 (62%), Positives = 608/787 (77%), Gaps = 23/787 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+ +H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA TT HPDYA LAARI VSNLHK TKK FSE ++D++N+ N ++G P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHFPIISSIT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
D++ K +L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRVAVGIH+
Sbjct: 121 MDVVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIYDTLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNGTSNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGTSNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DI FLDL+KN G EEHR RDLF ALW+PDLFM+RV+ +G WSL CP+E PGL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFERLYT YE+E + K +++A+ +W I++SQIETGTP++L+KD CNKKSNQQNL
Sbjct: 361 NVWGDEFERLYTLYEREKRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+IQY E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL PFDS
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S E+A +EGPY+TY GS S GILQ D+W V PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L LTE LW+ IKN+I+ D GS+Q +PE++K +YKT+WEI QKT++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQS+NIH+ P++ KLTS+HF+ W GLKTGMYYLR++ A+ I+FT+D +K P
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLDKDKIK--P 757
Query: 781 KVTDDDD 787
V D +
Sbjct: 758 LVVCDSE 764
>gi|66275870|ref|YP_232955.1| ribonucleotide reductase large subunit [Vaccinia virus]
gi|132611|sp|P12848.1|RIR1_VACCW RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleotide reductase large subunit
gi|335666|gb|AAB59806.1| ribonucleotide reductase [Vaccinia virus]
gi|29692179|gb|AAO89352.1| ribonucleotide reductase large subunit [Vaccinia virus WR]
gi|325514088|gb|ADZ24082.1| ribonucleotide reductase large subunit protein [Cowpox virus]
Length = 771
Score = 1043 bits (2698), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/786 (62%), Positives = 608/786 (77%), Gaps = 22/786 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+ +H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA TT HPDYA LAARI VSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI+ K +L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRVAVGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIYDTLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DI FLDL+KN G EEHR RDLF ALW+PDLFM+RV+ +G WSL CP+E PGL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFERLYT YE+E + K +++A+ +W I++SQIETGTP++L+KD CNKKSNQQNL
Sbjct: 361 NVWGDEFERLYTLYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+IQY E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL PFDS
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S E+A +EGPY+TY GS S GILQ D+W V PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L LTE LW+ IKN+I+ D GS+Q +PE++K +YKT+WEI QKT++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQS+NIH+ P++ KLTS+HF+ W GLKTGMYYLR++ A+ I+FT+D +K P
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLDKDKIKP-P 758
Query: 781 KVTDDD 786
V D +
Sbjct: 759 VVCDSE 764
>gi|373447260|gb|AEY72646.1| ribonucleotide reductase large subunit [Vaccinia virus]
Length = 771
Score = 1043 bits (2698), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 497/797 (62%), Positives = 612/797 (76%), Gaps = 29/797 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+ +H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA TT HPDYA LAARI VSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI+ K +L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRVAVGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIYDTLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DI FLDL+KN G EEHR RDLF ALW+PDLFM+RV+ +G WSL CP+E PGL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFERLYT YE+E + K +++A+ +W I++SQIETGTP++L+KD CNKKSNQQNL
Sbjct: 361 NVWGDEFERLYTLYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+IQY E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL PFDS
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S E+A +EGPY+TY GS S GILQ D+W V PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L LTE LW+ IKN+I+ D GS+Q +PE++K +YKT+WEI QKT++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQS+NIH+ P++ KLTS+HF+ W GLKTGMYYLR++ A+ I+FT+D +K P
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLDKDKIK--P 757
Query: 781 KVTDDDDAKMAQMVCSL 797
V D + +C+L
Sbjct: 758 LVVCDSE------ICTL 768
>gi|37551518|gb|AAQ93170.1| ribonucleotide reductase large subunit [Vaccinia virus]
Length = 771
Score = 1043 bits (2698), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/787 (62%), Positives = 608/787 (77%), Gaps = 23/787 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+ +H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA TT HPDYA LAARI VSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI+ K +L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRVAVGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIYDTLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DI FLDL+KN G EEHR RDLF ALW+PDLFM+RV+ +G WSL CP+E PGL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFERLYT YE+E + K +++A+ +W I++SQIETGTP++L+KD CNKKSNQQNL
Sbjct: 361 NVWGDEFERLYTLYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+IQY E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL PFDS
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S E+A +EGPY+TY GS S GILQ D+W V PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIKTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L LTE LW+ IKN+I+ D GS+Q +PE++K +YKT+WEI QKT++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQS+NIH+ P++ KLTS+HF+ W GLKTGMYYLR++ A+ I+FT+D +K P
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLDKDKIK--P 757
Query: 781 KVTDDDD 787
V D +
Sbjct: 758 LVVCDSE 764
>gi|62288418|gb|AAX78464.1| unknown [synthetic construct]
Length = 797
Score = 1043 bits (2697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/786 (62%), Positives = 608/786 (77%), Gaps = 22/786 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+ +H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 27 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 86
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA TT HPDYA LAARI VSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 87 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 146
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI+ K +L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRVAVGIH+
Sbjct: 147 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 206
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIYDTLK CA+
Sbjct: 207 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 266
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 267 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 326
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DI FLDL+KN G EEHR RDLF ALW+PDLFM+RV+ +G WSL CP+E PGL
Sbjct: 327 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 386
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFERLYT YE+E + K +++A+ +W I++SQIETGTP++L+KD CNKKSNQQNL
Sbjct: 387 NVWGDEFERLYTLYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 446
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+IQY E AVCNLAS+AL +V + R F
Sbjct: 447 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 486
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL PFDS
Sbjct: 487 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 546
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S E+A +EGPY+TY GS S GILQ D+W V PSD W+W
Sbjct: 547 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 606
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 607 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 666
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L LTE LW+ IKN+I+ D GS+Q +PE++K +YKT+WEI QKT++ MA DRG +
Sbjct: 667 LRVLTERKLWNDEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 725
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQS+NIH+ P++ KLTS+HF+ W GLKTGMYYLR++ A+ I+FT+D +K P
Sbjct: 726 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLDKDKIKP-P 784
Query: 781 KVTDDD 786
V D +
Sbjct: 785 VVCDSE 790
>gi|132610|sp|P20503.1|RIR1_VACCC RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleotide reductase large subunit
gi|56404829|sp|Q76RD8.1|RIR1_VACCA RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleotide reductase large subunit
gi|335407|gb|AAA48059.1| putative I4L [Vaccinia virus Copenhagen]
gi|2772697|gb|AAB96436.1| ribonucleotide reductase, large subunit [Vaccinia virus]
gi|38348940|gb|AAR17916.1| ribonucleotide reductase large subunit [Vaccinia virus]
gi|44971425|gb|AAS49775.1| RPXV062 [Rabbitpox virus]
gi|47088393|gb|AAT10463.1| ribonucleotide reductase large subunit [Vaccinia virus]
gi|56713441|gb|AAW23481.1| ribonucleoside-diphosphate reductase large subunit [Vaccinia virus]
gi|56713725|gb|AAW23763.1| ribonucleoside-diphosphate reductase large subunit [Vaccinia virus]
gi|88900691|gb|ABD57603.1| VACV069 [Vaccinia virus]
gi|90819733|gb|ABD98543.1| VACV-DUKE-081 [Vaccinia virus]
gi|160857955|emb|CAM58243.1| ribonucleotide reductase large subunit [Vaccinia virus Ankara]
gi|167412562|gb|ABZ79996.1| ribonucleotide reductase large subunit [Vaccinia virus GLV-1h68]
gi|373448450|gb|AEY73831.1| ribonucleotide reductase large subunit [Vaccinia virus]
gi|373448691|gb|AEY74071.1| ribonucleotide reductase large subunit [Vaccinia virus]
gi|373449403|gb|AEY74780.1| ribonucleotide reductase large subunit [Vaccinia virus]
gi|439965920|gb|AGB75794.1| ribonucleotide reductase large subunit [Vaccinia virus]
Length = 771
Score = 1043 bits (2697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/787 (62%), Positives = 608/787 (77%), Gaps = 23/787 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+ +H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA TT HPDYA LAARI VSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI+ K +L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRVAVGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIYDTLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DI FLDL+KN G EEHR RDLF ALW+PDLFM+RV+ +G WSL CP+E PGL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFERLYT YE+E + K +++A+ +W I++SQIETGTP++L+KD CNKKSNQQNL
Sbjct: 361 NVWGDEFERLYTLYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+IQY E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL PFDS
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S E+A +EGPY+TY GS S GILQ D+W V PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L LTE LW+ IKN+I+ D GS+Q +PE++K +YKT+WEI QKT++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQS+NIH+ P++ KLTS+HF+ W GLKTGMYYLR++ A+ I+FT+D +K P
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLDKDKIK--P 757
Query: 781 KVTDDDD 787
V D +
Sbjct: 758 LVVCDSE 764
>gi|18640305|ref|NP_570461.1| CMLV071 [Camelpox virus]
gi|18482981|gb|AAL73778.1|AF438165_68 ribonucleotide reductase large subunit [Camelpox virus M-96]
Length = 771
Score = 1043 bits (2697), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/787 (62%), Positives = 607/787 (77%), Gaps = 23/787 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+ +H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA TT HPDYA +AARI VSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAIIAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
D++ K +L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRVAVGIH+
Sbjct: 121 MDVVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIYDTLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNGTSNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGTSNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DI FLDL+KN G EEHR RDLF ALW+PDLFM+RV+ +G WSL CP+E PGL
Sbjct: 301 LEPWHYDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFERLYT YE+E + K +++A+ +W I++SQIETGTP++L+KD CNKKSNQQNL
Sbjct: 361 NVWGDEFERLYTLYEREKRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+IQY E AVCNLAS+AL +V + F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFVID--------------------ERF 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL PFDS
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S E+A +EGPY+TY GS S GILQ D+W V PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L LTE LW+ IKN+I+ D GS+Q +PE++K +YKT+WEI QKT++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQS+NIH+ P++ KLTS+HF+ W GLKTGMYYLR++ A+ I+FT+D +K P
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLDKDKIK--P 757
Query: 781 KVTDDDD 787
V D +
Sbjct: 758 LVVCDSE 764
>gi|68448942|gb|AAY97064.1| large subunit of ribonucleotide reductase protein [Monkeypox virus]
gi|68449144|gb|AAY97265.1| large subunit of ribonucleotide reductase protein [Monkeypox virus]
gi|300872688|gb|ADK39090.1| ribonucleotide reductase protein large subunit [Monkeypox virus]
gi|451327749|gb|AGF36621.1| ribonucleotide reductase large subunit [Monkeypox virus]
gi|451327957|gb|AGF36828.1| ribonucleotide reductase large subunit [Monkeypox virus]
gi|451328099|gb|AGF36969.1| large subunit of ribonucleotide reductase protein [Monkeypox virus]
Length = 771
Score = 1043 bits (2696), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/787 (62%), Positives = 609/787 (77%), Gaps = 23/787 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+ +H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA TT HPDYA LAARI +SNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAISNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI+ K +L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRVAVGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIYDTLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTTRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DI FLDL+KN G EEHR RDLF ALW+PDLFM+RV+ +G WSL CP+E PGL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFERLYT YE+E + K +++A+ +W I++SQIETGTP++L+KD CNKKSNQQNL
Sbjct: 361 NVWGDEFERLYTLYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+IQY E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL PFDS
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S ++A +EGPY+TY GS S GILQ D+W V PSD W+W
Sbjct: 521 PEAQDLNKKIFETIYYGALEASCKLAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EHLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L LTE LW+ IKN+I+ D GS+Q +PE++K +YKT+WEI QKT++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMVDGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQS+NIH+ P++ KLTS+HF+ W GLKTGMYYLR++ A+ I+FT+D +K P
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLDKDKIK--P 757
Query: 781 KVTDDDD 787
+V D +
Sbjct: 758 QVVCDSE 764
>gi|94485925|gb|ABF25031.1| ribonucleotide reductase large subunit [Variola virus]
Length = 771
Score = 1042 bits (2695), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/787 (62%), Positives = 605/787 (76%), Gaps = 23/787 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+ +H DP+ ++ KV G+Y GVTT +LD L
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLT 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA TT HPDYA LAARI VSNLHK TKK FSE +KD++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMKDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
D++ K +L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRVAVGIH+
Sbjct: 121 MDVVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIYDTLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G +Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGASNGIIPMLRVYNNTARYIDQGGNKRPGVMTIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DI FLDL+KN G EEHR RDLF ALW+PDLFM+RV+ +G WSL CP+E PGL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFERLYT YE+E + K +++A+ +W I++SQIETGTP++L+KD CNKKSNQQNL
Sbjct: 361 NVWGDEFERLYTLYEREKRYKSIIKARAVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+IQY E AVCNLASIAL +V + F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASIALNMFVID--------------------GQF 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL PFDS
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S E+A +EGPY+TY GS S GILQ D+W V PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L LTE LW+ IKN+I+ D GS+Q +PE++K +YKT+WEI QKT++ MA DRG +
Sbjct: 641 LRVLTERKLWNNEIKNRIMVDGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQS+NIH+ P++ KLTS+HF+ W GLKTGMYYLR++ A+ I+FT+D +K P
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLDKDKIK--P 757
Query: 781 KVTDDDD 787
V D +
Sbjct: 758 LVVCDSE 764
>gi|94483909|gb|ABF23025.1| ribonucleotide reductase large subunit [Variola virus]
gi|94484112|gb|ABF23227.1| ribonucleotide reductase large subunit [Variola virus]
gi|94485317|gb|ABF24426.1| ribonucleotide reductase large subunit [Variola virus]
gi|94485520|gb|ABF24628.1| ribonucleotide reductase large subunit [Variola virus]
gi|94487747|gb|ABF26844.1| ribonucleotide reductase large subunit [Variola virus]
gi|94488154|gb|ABF27249.1| ribonucleotide reductase large subunit [Variola virus]
gi|94488354|gb|ABF27448.1| ribonucleotide reductase large subunit [Variola virus]
gi|109726138|gb|ABG45254.1| ribonucleotide reductase large subunit [Variola virus]
Length = 771
Score = 1042 bits (2694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/787 (62%), Positives = 605/787 (76%), Gaps = 23/787 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+ +H DP+ ++ KV G+Y GVTT +LD L
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLT 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA TT HPDYA LAARI VSNLHK TKK FSE +KD++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMKDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
D++ K +L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRVAVGIH+
Sbjct: 121 MDVVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIYDTLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G +Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGASNGIIPMLRVYNNTARYIDQGGNKRPGVMTIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DI FLDL+KN G EEHR RDLF ALW+PDLFM+RV+ +G WSL CP+E PGL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFERLYT YE+E + K +++A+ +W I++SQIETGTP++L+KD CNKKSNQQNL
Sbjct: 361 NVWGDEFERLYTLYEREKRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+IQY E AVCNLASIAL +V + F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASIALNMFVID--------------------GQF 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL PFDS
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S E+A +EGPY+TY GS S GILQ D+W V PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L LTE LW+ IKN+I+ D GS+Q +PE++K +YKT+WEI QKT++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMVDGGSIQNT-NLPEDIKQVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQS+NIH+ P++ KLTS+HF+ W GLKTGMYYLR++ A+ I+FT+D +K P
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLDKDKIK--P 757
Query: 781 KVTDDDD 787
V D +
Sbjct: 758 LVVCDSE 764
>gi|94486937|gb|ABF26038.1| ribonucleotide reductase large subunit [Variola virus]
Length = 771
Score = 1042 bits (2694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/787 (62%), Positives = 605/787 (76%), Gaps = 23/787 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+ +H DP+ ++ KV G+Y GVTT +LD L
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLT 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA TT HPDYA LAARI VSNLHK TKK FSE +KD++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMKDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
D++ K +L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRVAVGIH+
Sbjct: 121 MDVVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIYDTLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G +Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGASNGIIPMLRVYNNTARYIDQGGNKRPGVMTIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DI FLDL+KN G EEHR RDLF ALW+PDLFM+RV+ +G WSL CP+E PGL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFERLYT YE+E + K +++A+ +W I++SQIETGTP++L+KD CNKKSNQQNL
Sbjct: 361 NVWGDEFERLYTLYEREKRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+IQY E AVCNLASIAL +V + F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASIALNMFVID--------------------GQF 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL PFDS
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S E+A +EGPY+TY GS S GILQ D+W V PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L LTE LW+ IKN+I+ D GS+Q +PE++K +YKT+WEI QKT++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMVDGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQS+NIH+ P++ KLTS+HF+ W GLKTGMYYLR++ A+ I+FT+D +K P
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASTPIQFTLDKDKIK--P 757
Query: 781 KVTDDDD 787
V D +
Sbjct: 758 LVVCDSE 764
>gi|6969720|gb|AAF33932.1| TI4L [Vaccinia virus Tian Tan]
Length = 771
Score = 1042 bits (2694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 495/787 (62%), Positives = 607/787 (77%), Gaps = 23/787 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+ +H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA TT HPDYA LAARI VSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI+ K +L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRVAVGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIYDTLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DI FLDL+KN G EEHR RDLF ALW+PDLFM+RV+ +G WSL CP+E PGL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFERLYT YE+E + K +++A+ +W I++SQIETGTP++L+KD CNKKSNQQNL
Sbjct: 361 NVWGDEFERLYTLYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+IQY E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL PFDS
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S E+A +EGPY+TY GS S GILQ D+W V PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGFRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L LTE LW+ IKN+I+ D GS+Q +PE++K +YKT+WEI QKT++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQS+NIH+ P++ KLTS+HF+ W GLKTGMYYLR++ A+ I+FT+D +K P
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLDKDKIK--P 757
Query: 781 KVTDDDD 787
V D +
Sbjct: 758 LVVCDSE 764
>gi|402591720|gb|EJW85649.1| ribonucleoside-diphosphate reductase [Wuchereria bancrofti]
Length = 813
Score = 1042 bits (2694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/821 (59%), Positives = 623/821 (75%), Gaps = 33/821 (4%)
Query: 2 YVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAA 61
YVVKRDG+ EAV FDKI R+ KL YGLS + D + +SQKV G+YKGVTT +LD LAA
Sbjct: 12 YVVKRDGRHEAVSFDKIARRIMKLCYGLSQDRVDHIEISQKVIAGLYKGVTTVELDNLAA 71
Query: 62 ETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVY 121
E AA M T HPDYA+LA+RI VSNLHK T+KSFS+ +YN + +SG PLI+ +++
Sbjct: 72 EIAADMITKHPDYATLASRITVSNLHKKTEKSFSKLSGRLYNATHPKSGRHMPLISKELF 131
Query: 122 DIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKD 181
DII NA LDS I+++RD+ Y YFG KTLERSYLL++ G++ ERPQHMLMRVA+GIH +
Sbjct: 132 DIIQNNANFLDSAIVHERDYLYTYFGLKTLERSYLLQINGELAERPQHMLMRVALGIHGE 191
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAII 241
+I++A++TY++MS+RWFTHA+PTLFN+GT Q+SSCFL+ M +DSIEGI++TLK+CA+I
Sbjct: 192 NIEAALETYNLMSERWFTHATPTLFNSGTCTPQMSSCFLLTMFEDSIEGIFETLKKCALI 251
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SKSAGGIG++VH IRA GS I GTNG SNG+VPMLRVFN+ ARYVDQGG KR GAFA+YL
Sbjct: 252 SKSAGGIGLNVHCIRAAGSAIAGTNGVSNGLVPMLRVFNNAARYVDQGGNKRPGAFAIYL 311
Query: 302 EPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLAD 361
EPWHADIF+FL+LRKN G E R RDLF+ LWVPDLFMERV+ + +WSL CP E PGL D
Sbjct: 312 EPWHADIFDFLELRKNVGDELERCRDLFFGLWVPDLFMERVRDDKIWSLMCPAECPGLED 371
Query: 362 CWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG 421
WG FE+LYT+YE+EG+ +K V A+ LW I+ +QIETG PYM++KDTCN+K+NQQNLG
Sbjct: 372 SWGEAFEKLYTQYEEEGRYRKQVPARKLWETIVFTQIETGVPYMVYKDTCNRKTNQQNLG 431
Query: 422 TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFD 481
TIK SNLCTEV+ Y+S E AVCNLASIAL R+V + +D
Sbjct: 432 TIKCSNLCTEVVLYSSREEIAVCNLASIALSRFV-------------------TSEMTYD 472
Query: 482 FEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDST 541
F L EVT +V +NLNK+ID NYYPV A RSN RHRPIGIGVQGLAD FIL+ PF S
Sbjct: 473 FNMLHEVTKVVVKNLNKVIDRNYYPVPEAERSNKRHRPIGIGVQGLADAFILMRYPFTSE 532
Query: 542 EAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWG 601
+A+ LNK IFET+YY AL S ++A +GPYE+Y GSP+SKGILQ DMWGV P+D+WDW
Sbjct: 533 KARDLNKRIFETMYYAALEASCDLAKEQGPYESYEGSPISKGILQFDMWGVTPTDQWDWE 592
Query: 602 GLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
LR+ I+K G+RNS+L+APMPTAST+QILGNNE EPYTSN+Y+R VLSG F + N HL+
Sbjct: 593 ILREKIAKYGIRNSVLLAPMPTASTAQILGNNESIEPYTSNVYTRNVLSGSFQIFNMHLM 652
Query: 662 HDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYI 721
+DL + LW +K +II + GS+Q I +IP+E++ +YKTVWE+ Q+ ++DMA DRG +I
Sbjct: 653 NDLMHLDLWDDDMKLEIIKNKGSIQNIERIPQEIRDLYKTVWEMSQRDIIDMAADRGAFI 712
Query: 722 DHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPK 781
D SQSLNI + +PN+G +TS+HF+ W +GLKTGMYYLR+R A DA++FTVD + LKE
Sbjct: 713 DQSQSLNIFIARPNYGNITSMHFYGWQKGLKTGMYYLRTRPAVDAVQFTVDKTRLKEYDN 772
Query: 782 VTDDDDAKMAQ--------------MVCSLTNREECMACGS 808
+ D ++K + M C+L+ +EC+ C S
Sbjct: 773 INADKNSKSSSSSTPATTSKLATKVMECTLSTGDECLMCSS 813
>gi|94484317|gb|ABF23431.1| ribonucleotide reductase large subunit [Variola virus]
gi|94489961|gb|ABF29047.1| ribonucleotide reductase large subunit [Variola virus]
Length = 771
Score = 1042 bits (2694), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/777 (63%), Positives = 601/777 (77%), Gaps = 21/777 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+ +H DP+ ++ KV G+Y GVTT +LD L
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLT 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA TT HPDYA LAARI VSNLHK TKK FSE +KD++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMKDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
D++ K +L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRVAVGIH+
Sbjct: 121 MDVVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIYDTLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G +Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGASNGIIPMLRVYNNTARYIDQGGNKRPGVMTIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DI FLDL+KN G EEHR RDLF ALW+PDLFM+RV+ +G WSL CP+E PGL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFERLYT YE+E + K +++A+ +W I++SQIETGTP++L+KD CNKKSNQQNL
Sbjct: 361 NVWGDEFERLYTLYEREKRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+IQY E AVCNLASIAL +V + F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASIALNMFVID--------------------GQF 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL PFDS
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S E+A +EGPY+TY GS S GILQ D+W V PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L LTE LW+ IKN+I+ D GS+Q +PE++K +YKT+WEI QKT++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMVDGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
ID SQS+NIH+ P++ KLTS+HF+ W GLKTGMYYLR++ A+ I+FT+D +K
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLDKDKIK 756
>gi|71027825|ref|XP_763556.1| ribonucleotide-diphosphate reductase large subunit [Theileria parva
strain Muguga]
gi|68350509|gb|EAN31273.1| ribonucleotide-diphosphate reductase large subunit, putative
[Theileria parva]
Length = 898
Score = 1041 bits (2693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/776 (62%), Positives = 605/776 (77%), Gaps = 21/776 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+ R G++E V FDKI R++KLS GL D V+Q V G+Y G+ TS+LDELA
Sbjct: 60 MYVINRHGEKEDVSFDKILNRIRKLSLGLH-SLVDAPRVTQSVINGMYTGIRTSELDELA 118
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
A+T A M HPDY+ LAA I + NLHKNT FSE I+ +++ Y A LI+DDV
Sbjct: 119 AQTCAYMAVTHPDYSRLAANITIDNLHKNTLNDFSEVIRTLHS-YKHVFNTNASLISDDV 177
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
++ +M N RL++EI Y RDF YDYFGFKTLERSYLLK GK+VERPQHM+MRV+ GIH
Sbjct: 178 FEFVMANKDRLNAEIDYSRDFQYDYFGFKTLERSYLLKTNGKIVERPQHMIMRVSAGIHC 237
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D++ I+TYH+MSQR+FTHA+PTLFNAGT Q+SSCFL+ M+DDS+ GI++TL +CA
Sbjct: 238 GDLERTIQTYHLMSQRYFTHATPTLFNAGTRHPQMSSCFLLDMQDDSLAGIFNTLSQCAF 297
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+++H IRA+GSYIRGTNG SNGIVPML++FN TA+YVDQGGGKRKG+FA+Y
Sbjct: 298 ISKSAGGIGLAIHKIRASGSYIRGTNGISNGIVPMLKIFNATAKYVDQGGGKRKGSFAIY 357
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+ LDLRKNHG E+ RARDLFYALW+PDLFM+RV++N W+L CP+E GL
Sbjct: 358 LEPWHADIFKLLDLRKNHGAEDQRARDLFYALWIPDLFMKRVEANKNWTLMCPDECRGLH 417
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFERLYT+YE++G +K + AQ LWF IL+SQIETGTPYML+KD CN KSNQQNL
Sbjct: 418 EVWGDEFERLYTQYEQQGLGRKTIPAQKLWFAILQSQIETGTPYMLYKDACNAKSNQQNL 477
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLC E++Q+T+ E AVCNLAS+ALP++V ++ R F
Sbjct: 478 GTIKSSNLCCEIVQFTNKDEVAVCNLASVALPKFV------------------NTQTRTF 519
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL E+ ++T NLNK+ID NYYPV+ AR SN RHRP+G+GVQGLADTF+L+ PF+S
Sbjct: 520 DFKKLYEICRVITYNLNKVIDRNYYPVKQARVSNFRHRPMGVGVQGLADTFMLMRYPFES 579
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDR-WD 599
EA++LNK IFET+YY L S ++A + G YETY GSP SKG+LQ D+WG + WD
Sbjct: 580 DEARELNKRIFETMYYACLSESIDLARQLGTYETYEGSPASKGLLQFDLWGAKVDNSLWD 639
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L+ + ++G+RNSL +APMPTASTSQILGNNE FEPYTSNIY RRVLSGEF VVN H
Sbjct: 640 WDKLKADLREHGLRNSLFIAPMPTASTSQILGNNESFEPYTSNIYYRRVLSGEFFVVNPH 699
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL+DL E+GLW+ +K K+I +GS++ I +IP+ +K +YKTVWEIKQK ++DMA DRG
Sbjct: 700 LLNDLIELGLWNETMKQKLIAYNGSLKHIDEIPQHIKDLYKTVWEIKQKHIIDMAADRGI 759
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
+ID SQSLNIHM+QP F KLTS+HF+ W +GLKTG+YYLR++ A DAIKFTVD S+
Sbjct: 760 FIDQSQSLNIHMEQPTFSKLTSMHFYGWKKGLKTGVYYLRTQPATDAIKFTVDASI 815
>gi|94486532|gb|ABF25635.1| ribonucleotide reductase large subunit [Variola virus]
gi|94486734|gb|ABF25836.1| ribonucleotide reductase large subunit [Variola virus]
Length = 771
Score = 1041 bits (2693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/787 (62%), Positives = 605/787 (76%), Gaps = 23/787 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+ +H DP+ ++ KV G+Y GVTT +LD L
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLT 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA TT HPDYA LAARI VSNLHK TKK FSE +KD++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMKDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
D++ K +L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRVAVGIH+
Sbjct: 121 MDVVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIYDTLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G +Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGASNGIIPMLRVYNNTARYIDQGGNKRPGVMTIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DI FLDL+KN G EEHR RDLF ALW+PDLFM+RV+ +G WSL CP+E PGL
Sbjct: 301 LEPWHSDIMTFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFERLYT YE+E + K +++A+ +W I++SQIETGTP++L+KD CNKKSNQQNL
Sbjct: 361 NVWGDEFERLYTLYEREKRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+IQY E AVCNLASIAL +V + F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASIALNMFVID--------------------GQF 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL PFDS
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S E+A +EGPY+TY GS S GILQ D+W V PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L LTE LW+ IKN+I+ D GS+Q +PE++K +YKT+WEI QKT++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMVDGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQS+NIH+ P++ KLTS+HF+ W GLKTGMYYLR++ A+ I+FT+D +K P
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLDKDKIK--P 757
Query: 781 KVTDDDD 787
V D +
Sbjct: 758 LVVCDSE 764
>gi|85001013|ref|XP_955225.1| ribonucleoside-diphosphate reductase large chain [Theileria
annulata strain Ankara]
gi|65303371|emb|CAI75749.1| ribonucleoside-diphosphate reductase large chain, putative
[Theileria annulata]
Length = 891
Score = 1041 bits (2693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 483/776 (62%), Positives = 605/776 (77%), Gaps = 21/776 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+ R G++E V FDKI R++KLS GL D V+Q V G+Y G+ TS+LDELA
Sbjct: 60 MYVINRHGEKEDVSFDKILNRIRKLSLGLH-SLVDAPRVTQSVINGMYTGIRTSELDELA 118
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
A+T A M HPDY+ LAA I + NLHKNT FSE I+ +++ Y A LI+DDV
Sbjct: 119 AQTCAYMAVTHPDYSRLAANITIDNLHKNTLNDFSEVIRVLHS-YKHVYNTNASLISDDV 177
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
++ +M+N RL++EI Y RDF YDYFGFKTLERSYLLK GK+VERPQHM+MRV+ GIH
Sbjct: 178 FEFVMENKDRLNAEIDYSRDFQYDYFGFKTLERSYLLKTNGKIVERPQHMIMRVSAGIHC 237
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D++ I+TYH+MSQR+FTHA+PTLFNAGT Q+SSCFL+ M+DDS+ GI++TL +CA
Sbjct: 238 GDLERTIQTYHLMSQRYFTHATPTLFNAGTKHPQMSSCFLLDMQDDSLAGIFNTLSQCAF 297
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+++H IRA+GSYIRGTNG SNGIVPML++FN TA+YVDQGGGKRKG+FA+Y
Sbjct: 298 ISKSAGGIGLAIHKIRASGSYIRGTNGISNGIVPMLKIFNSTAKYVDQGGGKRKGSFAIY 357
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+ LDLRKNHG E+ RARDLFYALW+PDLFM+RV++N W+L CP+E GL
Sbjct: 358 LEPWHADIFKLLDLRKNHGSEDQRARDLFYALWIPDLFMKRVEANKNWTLMCPDECRGLY 417
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFERLYT+YE++G +K + AQ LWF IL+SQIETGTPYML+KD CN KSNQQNL
Sbjct: 418 EVWGDEFERLYTQYEQQGMGRKTIPAQKLWFAILQSQIETGTPYMLYKDACNSKSNQQNL 477
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLC E++Q+TS E AVCNLAS+ALP++V ++ R F
Sbjct: 478 GTIKSSNLCCEIVQFTSKDEVAVCNLASVALPKFV------------------NTQTRTF 519
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL E+ ++T NLNK+ID NYYPV+ AR SN RHRP+G+GVQGLADTF+L+ PF+S
Sbjct: 520 DFKKLYEICRVITYNLNKVIDRNYYPVKQARASNFRHRPMGVGVQGLADTFMLMRYPFES 579
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDR-WD 599
EA++LNK IFET+YY L S ++A + G YE+Y GSP SKG+LQ D+WG + WD
Sbjct: 580 DEARELNKRIFETMYYACLSESIDLARQYGTYESYEGSPASKGLLQFDLWGAKVDNSLWD 639
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L+ + ++G+RNSL +APMPTASTSQILGNNE FEPYTSNIY RRVLSGEF VVN H
Sbjct: 640 WDKLKADLREHGLRNSLFIAPMPTASTSQILGNNESFEPYTSNIYYRRVLSGEFFVVNPH 699
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL+DL ++GLW+ +K K+I +GS++ I +IP +K +YKTVWEIKQK ++DMA DRG
Sbjct: 700 LLNDLIDLGLWNETMKQKLIAYNGSLKHIDEIPSHIKELYKTVWEIKQKHIIDMAADRGI 759
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
+ID SQSLNIHM+QP F KLTS+HF+ W +GLKTG+YYLR++ A DAIKFTVD S+
Sbjct: 760 FIDQSQSLNIHMEQPTFSKLTSMHFYGWKKGLKTGVYYLRTQPATDAIKFTVDASI 815
>gi|9627579|ref|NP_042102.1| hypothetical protein VARVgp058 [Variola virus]
gi|417658|sp|P32984.1|RIR1_VAR67 RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleotide reductase large subunit
gi|62335|emb|CAA47558.1| ribonucleotide reductase (large subunit) [Variola virus]
gi|297239|emb|CAA48999.1| K4L [Variola virus]
gi|438976|gb|AAA60806.1| homolog of vaccinia virus CDS I4L (ribonucleotide reductase, large
subunit); putative [Variola major virus]
gi|544814|gb|AAB29605.1| K4L product [variola virus VAR, India-1967, Peptide, 771 aa]
gi|94483704|gb|ABF22821.1| ribonucleotide reductase large subunit [Variola virus]
gi|94484521|gb|ABF23634.1| ribonucleotide reductase large subunit [Variola virus]
gi|94484719|gb|ABF23831.1| ribonucleotide reductase large subunit [Variola virus]
gi|94484917|gb|ABF24028.1| ribonucleotide reductase large subunit [Variola virus]
gi|94485115|gb|ABF24225.1| ribonucleotide reductase large subunit [Variola virus]
gi|94485722|gb|ABF24829.1| ribonucleotide reductase large subunit [Variola virus]
gi|94486126|gb|ABF25231.1| ribonucleotide reductase large subunit [Variola virus]
gi|94486329|gb|ABF25433.1| ribonucleotide reductase large subunit [Variola virus]
gi|94487140|gb|ABF26240.1| ribonucleotide reductase large subunit [Variola virus]
gi|94487342|gb|ABF26441.1| ribonucleotide reductase large subunit [Variola virus]
gi|94487546|gb|ABF26644.1| ribonucleotide reductase large subunit [Variola virus]
gi|94487951|gb|ABF27047.1| ribonucleotide reductase large subunit [Variola virus]
gi|94488554|gb|ABF27647.1| ribonucleotide reductase large subunit [Variola virus]
gi|94488755|gb|ABF27847.1| ribonucleotide reductase large subunit [Variola virus]
gi|94488956|gb|ABF28047.1| ribonucleotide reductase large subunit [Variola virus]
gi|94489155|gb|ABF28245.1| ribonucleotide reductase large subunit [Variola virus]
gi|94489355|gb|ABF28444.1| ribonucleotide reductase large subunit [Variola virus]
gi|94489557|gb|ABF28645.1| ribonucleotide reductase large subunit [Variola virus]
gi|94490166|gb|ABF29251.1| ribonucleotide reductase large subunit [Variola virus]
gi|109724101|gb|ABG43227.1| ribonucleotide reductase large subunit [Variola virus]
gi|109724305|gb|ABG43430.1| ribonucleotide reductase large subunit [Variola virus]
gi|109724712|gb|ABG43835.1| ribonucleotide reductase large subunit [Variola virus]
gi|109724915|gb|ABG44037.1| ribonucleotide reductase large subunit [Variola virus]
gi|109725119|gb|ABG44240.1| ribonucleotide reductase large subunit [Variola virus]
gi|109725324|gb|ABG44444.1| ribonucleotide reductase large subunit [Variola virus]
gi|109725527|gb|ABG44646.1| ribonucleotide reductase large subunit [Variola virus]
gi|109725731|gb|ABG44849.1| ribonucleotide reductase large subunit [Variola virus]
gi|109725934|gb|ABG45051.1| ribonucleotide reductase large subunit [Variola virus]
gi|109726341|gb|ABG45456.1| ribonucleotide reductase large subunit [Variola virus]
gi|109726544|gb|ABG45658.1| ribonucleotide reductase large subunit [Variola virus]
gi|745175|prf||2015436BP K4L gene
Length = 771
Score = 1041 bits (2693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/787 (62%), Positives = 605/787 (76%), Gaps = 23/787 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+ +H DP+ ++ KV G+Y GVTT +LD L
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLT 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA TT HPDYA LAARI VSNLHK TKK FSE +KD++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMKDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
D++ K +L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRVAVGIH+
Sbjct: 121 MDVVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIYDTLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G +Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGASNGIIPMLRVYNNTARYIDQGGNKRPGVMTIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DI FLDL+KN G EEHR RDLF ALW+PDLFM+RV+ +G WSL CP+E PGL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFERLYT YE+E + K +++A+ +W I++SQIETGTP++L+KD CNKKSNQQNL
Sbjct: 361 NVWGDEFERLYTLYEREKRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+IQY E AVCNLASIAL +V + F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASIALNMFVID--------------------GQF 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL PFDS
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S E+A +EGPY+TY GS S GILQ D+W V PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L LTE LW+ IKN+I+ D GS+Q +PE++K +YKT+WEI QKT++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMVDGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQS+NIH+ P++ KLTS+HF+ W GLKTGMYYLR++ A+ I+FT+D +K P
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLDKDKIK--P 757
Query: 781 KVTDDDD 787
V D +
Sbjct: 758 LVVCDSE 764
>gi|88854118|gb|ABD52536.1| ribonucleotide reductase large subunit M1 [Vaccinia virus]
Length = 771
Score = 1041 bits (2692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/787 (62%), Positives = 608/787 (77%), Gaps = 23/787 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+ +H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA TT HPDYA LAARI VSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI+ K +L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRVAVGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIYDTLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DI FLDL+KN G EEHR RDLF ALW+PDLFM+RV+ +G WSL CP+E PGL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFERLYT YE+E + K +++A+ +W I++SQIETGTP++L+KD CNKKSNQQNL
Sbjct: 361 NVWGDEFERLYTLYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+IQY E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL PFDS
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S E+A +EGPY+TY GS S GILQ D+W V PS+ W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSNLWNW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L LTE LW+ IKN+I+ D GS+Q +PE++K +YKT+WEI QKT++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQS+NIH+ P++ KLTS+HF+ W GLKTGMYYLR++ A+ I+FT+D +K P
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLDKDKIK--P 757
Query: 781 KVTDDDD 787
V D +
Sbjct: 758 LVVCDSE 764
>gi|94489757|gb|ABF28844.1| ribonucleotide reductase large subunit [Variola virus]
Length = 771
Score = 1040 bits (2689), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/787 (62%), Positives = 605/787 (76%), Gaps = 23/787 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+ +H DP+ ++ KV G+Y GVTT +LD L
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLT 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA TT HPDYA LAARI VSNLHK TKK FSE +KD++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMKDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
D++ K +L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRVAVGIH+
Sbjct: 121 MDVVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIYDTLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G +Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGASNGIIPMLRVYNNTARYIDQGGNKRPGVMTIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DI FLDL+KN G EEHR RDLF ALW+PDLFM+RV+ +G WSL CP+E PGL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFERLYT YE+E + K +++A+ +W I++SQIETGTP++L+KD CNKKSNQQNL
Sbjct: 361 NVWGDEFERLYTLYEREKRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+IQY E AVCNLASIAL +V + F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASIALNMFVID--------------------GQF 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL PFDS
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S E+A ++GPY+TY GS S GILQ D+W V PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKKGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L LTE LW+ IKN+I+ D GS+Q +PE++K +YKT+WEI QKT++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMVDGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQS+NIH+ P++ KLTS+HF+ W GLKTGMYYLR++ A+ I+FT+D +K P
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLDKDKIK--P 757
Query: 781 KVTDDDD 787
V D +
Sbjct: 758 LVVCDSE 764
>gi|51342225|gb|AAU01269.1| MPXV-WRAIR059 [Monkeypox virus]
gi|58220529|gb|AAW67817.1| MPXV-SL-059 [Monkeypox virus]
gi|59858865|gb|AAX09160.1| MPXV-COP-059 [Monkeypox virus]
gi|68448741|gb|AAY96864.1| large subunit of ribonucleotide reductase protein [Monkeypox virus]
gi|68449343|gb|AAY97463.1| large subunit of ribonucleotide reductase protein [Monkeypox virus]
gi|68449543|gb|AAY97662.1| large subunit of ribonucleotide reductase protein [Monkeypox virus]
Length = 771
Score = 1040 bits (2688), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/787 (62%), Positives = 609/787 (77%), Gaps = 23/787 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+ +H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA TT HPDYA LAARI +SNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAISNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI+ K +L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRVAVGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIYDTLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTTRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DI FLDL+KN G +EHR RDLF ALW+PDLFM+RV+ +G WSL CP+E PGL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNDEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFERLYT YE+E + K +++A+ +W I++SQIETGTP++L+KD CNKKSNQQNL
Sbjct: 361 NVWGDEFERLYTLYERERRYKCIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+IQY E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL PFDS
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S ++A +EGPY+TY GS S GILQ D+W V PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCKLAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L LTE LW+ IKN+I+ D GS+Q +PE++K +YKT+WEI QKT++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMVDGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQS+NIH+ P++ KLTS+HF+ W GLKTGMYYLR++ A+ I+FT+D +K P
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLDKDKIK--P 757
Query: 781 KVTDDDD 787
+V D +
Sbjct: 758 QVVCDSE 764
>gi|1143665|emb|CAA53832.1| unnamed protein product [Variola virus]
gi|5830619|emb|CAB54658.1| L4L protein [Variola minor virus]
Length = 771
Score = 1038 bits (2684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/777 (62%), Positives = 600/777 (77%), Gaps = 21/777 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+ +H DP+ ++ KV G+Y GVTT +LD L
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLT 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA TT HPDYA LAARI VSNLHK TKK FSE +KD++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMKDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
D++ K +L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRVAVGIH+
Sbjct: 121 MDVVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIYDTLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G +Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGASNGIIPMLRVYNNTARYIDQGGNKRPGVMTIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DI FLDL+KN G EEHR RDLF ALW+PDLFM+RV+ +G WSL CP+E PGL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFERLYT YE+E + K +++A+ +W I++SQIETGTP++L+KD CNKKSNQQNL
Sbjct: 361 NVWGDEFERLYTLYEREKRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+IQY E AVCNLASIAL +V + F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASIALNMFVID--------------------GQF 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLA FILL PFDS
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLAYAFILLNYPFDS 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S E+A +EGPY+TY GS S GILQ D+W V PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L LTE LW+ IKN+I+ D GS+Q +PE++K +YKT+WEI QKT++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMVDGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
ID SQS+NIH+ P++ KLTS+HF+ W GLKTGMYYLR++ A+ I+FT+D +K
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLDKDKIK 756
>gi|109724507|gb|ABG43631.1| ribonucleotide reductase large subunit [Variola virus]
Length = 771
Score = 1038 bits (2683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 492/787 (62%), Positives = 603/787 (76%), Gaps = 23/787 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+ +H DP+ ++ KV G+Y GVTT +LD L
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLT 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA TT HPDYA LAARI VSNLHK TKK FSE +KD++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMKDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
D++ K +L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRVAVGIH+
Sbjct: 121 MDVVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIYDTLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMMDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G +Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGASNGIIPMLRVYNNTARYIDQGGNKRPGVMTIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DI FLDL+KN G EEHR RDLF ALW+PDLFM+RV+ + WSL CP+E PGL
Sbjct: 301 LEPWHFDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDEEWSLMCPDECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFERLYT YE+E + K +++A+ +W I++SQIETGTP++L+KD CNKKSNQQNL
Sbjct: 361 NVWGDEFERLYTLYEREKRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+IQY E AVCNLASIAL +V + F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASIALNMFVID--------------------GQF 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL PFDS
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S E+A +EGPY+TY GS S GILQ D+W V PSD W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L LTE LW+ IKN+I+ D GS+Q +PE++K +YKT+WEI QKT++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMVDGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQS+NIH+ P++ KLTS+HF+ W GLKTGMYYLR++ A+ I+FT+D +K P
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLDKDKIK--P 757
Query: 781 KVTDDDD 787
V D +
Sbjct: 758 LVVCDSE 764
>gi|17974978|ref|NP_536492.1| I4L [Monkeypox virus Zaire-96-I-16]
gi|17529845|gb|AAL40523.1|AF380138_65 I4L [Monkeypox virus Zaire-96-I-16]
Length = 771
Score = 1037 bits (2682), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/787 (62%), Positives = 607/787 (77%), Gaps = 23/787 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+ +H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA TT HPDYA LAARI +SNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAISNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI+ K +L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRVAVGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIYDTLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTTRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+G YI GTNG SNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGGYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DI FLDL+KN G EEHR RDLF ALW+PDLFM+RV+ +G WSL CP+E P L
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPRLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFERLYT YE+E + K +++A+ +W I++SQIETGTP++L+KD CNKKSNQQNL
Sbjct: 361 NVWGDEFERLYTLYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+IQY E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL PFDS
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S ++A +EGPY+TY GS S GILQ D+W V PSD W+W
Sbjct: 521 PEAQDLNKKIFETIYYGALEASCKLAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EHLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L LTE LW+ IKN+I+ D GS+Q +PE++K +YKT+WEI QKT++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMVDGGSIQN-TNLPEDIKRVYKTIWEIAQKTIIKMAADRGAF 699
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQS+NIH+ P++ KLTS+HF+ W GLKTGMYYLR++ A+ I+FT+D +K P
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLDKDKIK--P 757
Query: 781 KVTDDDD 787
+V D +
Sbjct: 758 QVVCDSE 764
>gi|164659252|ref|XP_001730750.1| hypothetical protein MGL_1749 [Malassezia globosa CBS 7966]
gi|159104648|gb|EDP43536.1| hypothetical protein MGL_1749 [Malassezia globosa CBS 7966]
Length = 850
Score = 1036 bits (2679), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/744 (64%), Positives = 604/744 (81%), Gaps = 16/744 (2%)
Query: 35 DPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSF 94
DP+ +++KV G+Y+GVTT +LD LAAETAA TT HPDYA LAARI +SNLHK TKKSF
Sbjct: 5 DPIEITRKVIDGIYEGVTTVELDNLAAETAAYKTTTHPDYAVLAARIAISNLHKETKKSF 64
Query: 95 SETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERS 154
S+ I+D++++ N ++G + +I+++ ++ +MK+ LDS IIY+RDF Y++FGFKTLERS
Sbjct: 65 SQVIQDLHDYVNPKTGRPSSMISEETFNTVMKHRELLDSAIIYERDFHYNFFGFKTLERS 124
Query: 155 YLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQ 214
YLL++ GKV ERPQHMLMRVAVGIH +DI+SAI+TY+ MS++ FTHASPTLFNAGTP Q
Sbjct: 125 YLLRINGKVAERPQHMLMRVAVGIHGEDIESAIETYNYMSEKAFTHASPTLFNAGTPNPQ 184
Query: 215 LSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVP 274
+SSCFLV MK+DSIEGIYDTLK CA+ISK+AGGIG+++HNIR TGSYI GTNG SNGIVP
Sbjct: 185 MSSCFLVSMKEDSIEGIYDTLKTCAMISKTAGGIGLNIHNIRGTGSYIAGTNGVSNGIVP 244
Query: 275 MLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWV 334
MLRVFN+TARYVDQGG KR GAFA+YLEPWH D+FEF+DLRKNHGK+E RARDLF A+WV
Sbjct: 245 MLRVFNNTARYVDQGGNKRPGAFAIYLEPWHPDVFEFVDLRKNHGKDEVRARDLFLAMWV 304
Query: 335 PDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEIL 394
PDLFM+RV+ N WSL CP EAPGLADC+G EFE LY +YE+EG+AK+ V+AQ LW+ IL
Sbjct: 305 PDLFMKRVEKNEDWSLMCPAEAPGLADCYGEEFEELYERYEREGRAKRSVKAQKLWYAIL 364
Query: 395 KSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRY 454
++QIETG P+ML+KD N+KSNQ+NLGTIKSSNLCTE+++Y+SP ETAVCNLASIALP +
Sbjct: 365 EAQIETGNPFMLYKDAANRKSNQKNLGTIKSSNLCTEIMEYSSPEETAVCNLASIALPTF 424
Query: 455 VREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSN 514
+ G ++ ++F++L +V +V +NLN+IID+NYYPV +ARRSN
Sbjct: 425 IEGTGA----------------SKIYNFQRLHDVAKVVCKNLNRIIDINYYPVPSARRSN 468
Query: 515 LRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYET 574
+RHRPIGIGVQGLAD F+++G PFDS EA++LN IFETIY+ AL S E+A + G YET
Sbjct: 469 MRHRPIGIGVQGLADAFMIMGYPFDSQEARRLNLQIFETIYHAALERSCELAEQYGTYET 528
Query: 575 YHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNE 634
Y GSP S+GILQ DMW P+D WDW L+ I+++G+RNSLL+APMPTASTSQILG NE
Sbjct: 529 YQGSPASQGILQYDMWNRTPTDLWDWASLKAKIAQHGLRNSLLLAPMPTASTSQILGFNE 588
Query: 635 CFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEE 694
CFEPYT+NIY RRVL+GEF VVN LL +L E+GLW+ +K KII GS+Q IP IP+
Sbjct: 589 CFEPYTNNIYMRRVLAGEFQVVNPWLLRELVELGLWNDSMKQKIIAHGGSIQNIPGIPDH 648
Query: 695 LKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTG 754
+KA+YKTVWEI QK ++DMA DRG ++ SQSLNIH+ P+FG+LTS+HF+ W +GLKTG
Sbjct: 649 IKALYKTVWEISQKVIIDMAADRGAFVCQSQSLNIHLSAPSFGQLTSMHFYGWKKGLKTG 708
Query: 755 MYYLRSRAAADAIKFTVDTSVLKE 778
YYLR+R AA AI+FTV + E
Sbjct: 709 SYYLRTRPAASAIQFTVSNEEIAE 732
>gi|323098474|gb|ADX22712.1| large subunit of ribonucleotide reductase protein [Monkeypox virus]
Length = 771
Score = 1035 bits (2676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/787 (62%), Positives = 606/787 (77%), Gaps = 23/787 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+ +H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA TT HPDYA LAARI +SNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAISNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI+ K +L+S IIY+RDF Y+YF FKTLE+SYLLK+ K+VERPQHMLMRVAVGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFXFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIYDTLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTTRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG R G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGXXRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DI FLDL+KN G EEHR RDLF ALW+PDLFM+RV+ +G WSL CP+E PGL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFERLYT YE+E + K +++A+ +W I++SQIETGTP++L+KD CNKKSNQQNL
Sbjct: 361 NVWGDEFERLYTLYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+IQY E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL PFDS
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S ++A +EGPY+TY GS S GILQ D+W V PSD W+W
Sbjct: 521 PEAQDLNKKIFETIYYGALEASCKLAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EHLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L LTE LW+ IKN+I+ D GS+Q +PE++K +YKT+WEI QKT++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMVDGGSIQN-TNLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQS+NIH+ P++ KLTS+HF+ W GLKTGMYYLR+ A+ I+FT+D +K P
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTXPASAPIQFTLDKDKIK--P 757
Query: 781 KVTDDDD 787
+V D +
Sbjct: 758 QVVCDSE 764
>gi|373447978|gb|AEY73361.1| ribonucleotide reductase large subunit [Vaccinia virus]
Length = 769
Score = 1034 bits (2673), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/787 (62%), Positives = 606/787 (77%), Gaps = 25/787 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+ +H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA TT HPDYA LAARI VSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI+ K +L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRVAVGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIYDTLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DI FLDL+KN G EEHR RDLF ALW+PDLFM+RV+ +G WSL CP+E PGL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFERLYT YE+E + K +++A+ +W I++SQIETGTP++L+KD CNKKSNQQNL
Sbjct: 361 NVWGDEFERLYTLYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+IQY E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL PFDS
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFET Y AL S E+A +EGPY+TY GS S GILQ D+W V PSD W+W
Sbjct: 521 LEAQDLNKKIFET--YGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 578
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 579 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 638
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L LTE LW+ IKN+I+ D GS+Q +PE++K +YKT+WEI QKT++ MA DRG +
Sbjct: 639 LRVLTERKLWNDEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 697
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQS+NIH+ P++ KLTS+HF+ W GLKTGMYYLR++ A+ I+FT+D +K P
Sbjct: 698 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLDKDKIK--P 755
Query: 781 KVTDDDD 787
V D +
Sbjct: 756 LVVCDSE 762
>gi|334327874|ref|XP_001363871.2| PREDICTED: ribonucleoside-diphosphate reductase large subunit
[Monodelphis domestica]
Length = 755
Score = 1033 bits (2672), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 508/813 (62%), Positives = 616/813 (75%), Gaps = 63/813 (7%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG+QE V FDKIT+R++KL YGL++E DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMEFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT HPDYA LAARI VSNLHK TKK FS+ ++D+YN+ N + +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPYNSKHSPMVAKST 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
D+++ N RL+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRV+VGIHK
Sbjct: 121 LDVVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDID+AI+TY+++S+RWFTHASPTLFNAGT R QLSSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 DDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH D+FEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV++N WSL CPNE PGL
Sbjct: 301 LEPWHLDVFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVENNQDWSLMCPNECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG EFE+LY YEK+G+ +KVV+AQ LW+ I++SQ ETGTPYML+KD+CN+KSNQQNL
Sbjct: 361 DVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YTS E AVCNLAS+AL +V + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMFV-------------------TLEHTY 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLAEVT ++ NLNKIID+NYYPV A SN RHRPIGIGVQGLAD FIL+ PF+S
Sbjct: 462 DFKKLAEVTKVIVRNLNKIIDINYYPVPEASLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S E+A GPYETY GSPVSKGILQ DMW V P+D WDW
Sbjct: 522 PEAQLLNKQIFETIYYGALEASCELAKEYGPYETYEGSPVSKGILQYDMWNVAPTDLWDW 581
Query: 601 GGLRDMISK---NGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
L++ I+K G+RN +VN
Sbjct: 582 KVLKEKIAKYLDGGIRNE---------------------------------------IVN 602
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
HLL DLTE GLW+ +KN+II +GS+Q IP+IPE+LK +YKTVWEI QKT++ MA DR
Sbjct: 603 PHLLKDLTERGLWNEEMKNQIIACNGSIQSIPEIPEDLKQLYKTVWEISQKTVLKMAADR 662
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
G +ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR+R AA+ I+FT++ LK
Sbjct: 663 GAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLK 722
Query: 778 ENPKVTDDDDAK--MAQMVCSLTNREECMACGS 808
E KV D++ + A MVCSL NR+EC+ CGS
Sbjct: 723 EKEKVLKDEEKERNTAAMVCSLENRDECLMCGS 755
>gi|323098671|gb|ADX22908.1| large subunit of ribonucleotide reductase protein [Monkeypox virus]
Length = 771
Score = 1033 bits (2670), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 493/806 (61%), Positives = 608/806 (75%), Gaps = 37/806 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+ +H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA TT HPDYA LAARI +SNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAISNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI+ K +L+S IIY+RDF Y+YF FKTLE+SYLLK+ K+VERPQHMLMRVAVGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFXFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIYDTLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTTRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG R G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGXXRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DI FLDL+KN G EEHR RDLF ALW+PDLFM+RV+ +G WSL CP+E PGL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFERLYT YE+E + K +++A+ +W I++SQIETGTP++L+KD CNKKSNQQNL
Sbjct: 361 NVWGDEFERLYTLYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+IQY E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD F LL PFDS
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFXLLNYPFDS 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S ++A +EGPY+TY GS S GILQ D+W V PSD W+W
Sbjct: 521 PEAQDLNKKIFETIYYGALEASCKLAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EHLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L LTE LW+ IKN+I+ D GS+Q +PE++K +YKT+WEI QKT++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMVDGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQS+NIH+ P++ KLTS+HF+ W GLKTGMYYLR+ A+ I+FT+D
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTXPASAPIQFTLDK------- 752
Query: 781 KVTDDDDAKMAQMVCSLTNREECMAC 806
D Q+VC + E C +C
Sbjct: 753 ------DKXXPQVVC---DSEICTSC 769
>gi|170579939|ref|XP_001895047.1| ribonucleoside-diphosphate reductase large chain [Brugia malayi]
gi|158598142|gb|EDP36102.1| ribonucleoside-diphosphate reductase large chain, putative [Brugia
malayi]
Length = 1061
Score = 1033 bits (2670), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 489/817 (59%), Positives = 620/817 (75%), Gaps = 31/817 (3%)
Query: 2 YVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAA 61
YVVKRDG+ EAV FDKI R+ KL YGLS + D + +SQKV G+YKGVTT +LD LAA
Sbjct: 12 YVVKRDGRHEAVSFDKIARRIMKLCYGLSQDRVDHIEISQKVIAGLYKGVTTVELDNLAA 71
Query: 62 ETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVY 121
E AA M T HPDYA+LA+RI VSNLHK T+KSFS+ + +YN + +SG PLI+ +++
Sbjct: 72 EIAADMITKHPDYATLASRITVSNLHKKTEKSFSKLSRRLYNATHPKSGRHMPLISKELF 131
Query: 122 DIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKD 181
DII NA LDS I+++RD+ Y YFG KTLERSYLL++ G++ ERPQHMLMRVA+GIH +
Sbjct: 132 DIIQNNANLLDSAIVHERDYLYTYFGLKTLERSYLLQINGELAERPQHMLMRVALGIHGE 191
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAII 241
DI++A++TY++MS+RWFTHA+PTLFN+GT Q+SSCFL+ M +DSIEGI++TLK+CA+I
Sbjct: 192 DIEAALETYNLMSERWFTHATPTLFNSGTCTPQMSSCFLLTMFEDSIEGIFETLKKCALI 251
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SKSAGGIG++VH IRA+GS I GTNG SNG+VPMLRVFN+ ARYVDQGG KR GAFAVYL
Sbjct: 252 SKSAGGIGLNVHCIRASGSAIAGTNGVSNGLVPMLRVFNNAARYVDQGGNKRPGAFAVYL 311
Query: 302 EPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLAD 361
EPWHADIF+FL+LRKN G E R RDLF+ LWVPDLFMERV+ + +WSL CP E PGL D
Sbjct: 312 EPWHADIFDFLELRKNVGDELERCRDLFFGLWVPDLFMERVRDDKIWSLMCPAECPGLED 371
Query: 362 CWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG 421
WG FE+LYT+YE+EG+ +K V A+ LW I+ +QIETG PYM++KDTCN+K+NQQNLG
Sbjct: 372 SWGEAFEKLYTQYEEEGRYRKQVPARKLWETIVFTQIETGMPYMVYKDTCNRKTNQQNLG 431
Query: 422 TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFD 481
TIK SNLCTEV+ Y+S E AVCNLASIAL R+V + +D
Sbjct: 432 TIKCSNLCTEVVLYSSREEIAVCNLASIALGRFV-------------------TSEMKYD 472
Query: 482 FEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDST 541
F+ L EVT +V +NLNK+ID NYYP+ A RSN RHRPIGIGVQGLAD FIL+ PF S
Sbjct: 473 FKMLHEVTKVVVKNLNKVIDRNYYPIPEAERSNKRHRPIGIGVQGLADAFILMRYPFTSE 532
Query: 542 EAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWG 601
+A+ LNK IFETIYY AL S ++A +GPYE+Y GSP+SKGILQ DMWGV P+D+ DWG
Sbjct: 533 KARDLNKRIFETIYYAALEASCDLAKEQGPYESYEGSPISKGILQFDMWGVTPTDQCDWG 592
Query: 602 GLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
LR+ I+K G+RNS+L++PMPTAST+QILGNNE EPYTSN+Y+R VLSG F + N HL+
Sbjct: 593 TLREKIAKFGIRNSVLLSPMPTASTAQILGNNESIEPYTSNVYTRNVLSGSFQIFNMHLM 652
Query: 662 HDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYI 721
+DL + LW +K +II + GS+Q I +IP+E++ +Y+TVWE+ Q+ ++DMA DRG +I
Sbjct: 653 NDLMHLDLWDDDMKLEIIKNKGSIQNIERIPQEIRDLYRTVWEMSQRDIIDMAADRGAFI 712
Query: 722 DHSQSLNIHMDQPNFGKLTSLHFHAW---------LRGLKTGMYYLRSRAAADAIKFTVD 772
D SQSLNI + +PN+G +TS+HF+ W +GLKTGMYYLR+R A DA++FTVD
Sbjct: 713 DQSQSLNIFIARPNYGNITSMHFYGWQKVCTAFLMYKGLKTGMYYLRTRPAVDAVQFTVD 772
Query: 773 TSVLKENPKVTDDDDAKMAQMVCSLTNRE---ECMAC 806
+ LKE V D ++K + T E + M C
Sbjct: 773 KTRLKEYDSVNGDKNSKSSSSSIPATTSELATKVMEC 809
>gi|428671726|gb|EKX72641.1| ribonucleoside-diphosphate reductase large chain, putative [Babesia
equi]
Length = 857
Score = 1030 bits (2664), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 480/776 (61%), Positives = 602/776 (77%), Gaps = 21/776 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+ R G++E V FD+I R++KLS GL D V+Q V G+Y G+ TSQLDELA
Sbjct: 47 MYVINRRGEKEDVSFDRILNRIRKLSAGLH-SLVDAPRVTQSVINGMYTGIHTSQLDELA 105
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
A+T A M HPDY+ LAA I V NLHKNT FSE ++ +Y Y A +I+ DV
Sbjct: 106 AQTCAYMAVTHPDYSRLAANITVDNLHKNTSDDFSEVVRTLY-EYKHVYNTNASMISYDV 164
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+ IM+N RL++EI Y RDF YDYFGFKTLERSYLL+ K+VERPQHMLMRV+ GIH
Sbjct: 165 YNFIMENKDRLNAEIDYSRDFQYDYFGFKTLERSYLLRANNKIVERPQHMLMRVSAGIHC 224
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D++ ++TYH+MSQ++FTHA+PTLFN+GT R Q+SSCFL+ M+DDS+ GI++TL +CA
Sbjct: 225 GDVERTVETYHLMSQKFFTHATPTLFNSGTNRPQMSSCFLLDMQDDSLAGIFNTLTQCAF 284
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+++H IRA+GSYIRGTNG SNGIVPMLR+FN TA+YVDQGGGKR+G+FA+Y
Sbjct: 285 ISKSAGGIGLAIHKIRASGSYIRGTNGQSNGIVPMLRIFNTTAKYVDQGGGKRRGSFAIY 344
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+ LDLRKNHG E+ RARDLFYALW+PDLFM+RV++N W+L CP+E GL
Sbjct: 345 LEPWHADIFKMLDLRKNHGSEDLRARDLFYALWIPDLFMKRVEANENWTLMCPDECRGLY 404
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE LYTKYE+ G +K + AQ LWF IL+SQIETGTPYML+KD CN KSNQ+NL
Sbjct: 405 EVWGDEFEALYTKYEQAGMGRKTIPAQKLWFAILQSQIETGTPYMLYKDACNAKSNQKNL 464
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLC E++QYT E AVCNLASIALP +V + + + F
Sbjct: 465 GTIKSSNLCCEIVQYTDSKEVAVCNLASIALPMFVNK------------------EEKTF 506
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL ++ ++T NLN+IID NYYPV+ AR SN RHRPIG+GVQGLADTF+LL PF+S
Sbjct: 507 DFKKLYKIARVITYNLNQIIDRNYYPVKEARYSNFRHRPIGVGVQGLADTFMLLRYPFES 566
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDR-WD 599
EA++LNK IFETIYY L S +A + G YE+Y GSP S+G+LQ D+WG ++ WD
Sbjct: 567 DEARELNKRIFETIYYACLDESISLAEKHGHYESYPGSPASQGLLQFDLWGAKVDNKLWD 626
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L+ + K+G+RNSL +APMPTASTSQILGNNE FEPYTSNIY RRVLSGEF VVN H
Sbjct: 627 WDDLKARMKKHGLRNSLFLAPMPTASTSQILGNNESFEPYTSNIYYRRVLSGEFFVVNPH 686
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL+DL ++GLW+ +K K+I +GS++ I +IP+ +K +YKTVWEIKQKT++DMA DRG
Sbjct: 687 LLNDLVDLGLWNETMKQKLIAYNGSLRHIEEIPQHIKELYKTVWEIKQKTIIDMAADRGI 746
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
+ID SQSLNI+M+QP F KLTS+HF+ W +GLKTG+YYLR++ A DAIKFT+D+++
Sbjct: 747 FIDQSQSLNIYMEQPTFSKLTSMHFYGWKKGLKTGVYYLRTQPATDAIKFTIDSNI 802
>gi|409042060|gb|EKM51544.1| hypothetical protein PHACADRAFT_261748 [Phanerochaete carnosa
HHB-10118-sp]
Length = 810
Score = 1029 bits (2661), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/712 (67%), Positives = 580/712 (81%), Gaps = 20/712 (2%)
Query: 67 MTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMK 126
MTT HPDYA LAARI VSNLHK TKKSFS IKD+Y + N ++G A +IA DVY+I+
Sbjct: 1 MTTKHPDYAILAARIAVSNLHKETKKSFSAVIKDLYEYVNPKNGRPASMIAKDVYEIVTA 60
Query: 127 NAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSA 186
NA RLDS +IY RDF Y++FGFKTLERSYLLK+ G+ ERPQH+LMRVAVGIH DID A
Sbjct: 61 NAERLDSAVIYSRDFSYNFFGFKTLERSYLLKINGRPAERPQHLLMRVAVGIHGADIDRA 120
Query: 187 IKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAG 246
I+TY++MS+R+FTHASPTLFNAGTP QLSSCFLVCMKDDSIEGIYDTLK CA+ISK+AG
Sbjct: 121 IETYNLMSERFFTHASPTLFNAGTPNPQLSSCFLVCMKDDSIEGIYDTLKSCAMISKTAG 180
Query: 247 GIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHA 306
GIG+++HNIRATGSYI GTNG SNGIVPMLR ++ TARYVDQGG KR GAFA+YLEPWHA
Sbjct: 181 GIGLNIHNIRATGSYIAGTNGYSNGIVPMLRAYDATARYVDQGGNKRPGAFAIYLEPWHA 240
Query: 307 DIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTE 366
DIFEF+DLRKNHGKEE RARDLFYALW+PDLFM+RV++NG W+LFCPNEAPGL + WG E
Sbjct: 241 DIFEFIDLRKNHGKEEVRARDLFYALWIPDLFMKRVEANGKWTLFCPNEAPGLHEVWGAE 300
Query: 367 FERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSS 426
FE LY +YE+EG+ +K ++AQ LW+ +L++QIETG P+ML+KD+ N KSNQQNLGTIKSS
Sbjct: 301 FEELYERYEREGRGRKTIEAQKLWYAVLEAQIETGGPFMLYKDSANAKSNQQNLGTIKSS 360
Query: 427 NLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLA 486
NLCTE+I+Y++P ETAVCNLASIALP Y+ +N ++F+KL
Sbjct: 361 NLCTEIIEYSAPDETAVCNLASIALPSYI--------------------ENGQYNFQKLH 400
Query: 487 EVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQL 546
++T +V NLN+IIDVNYYP ARRSN+RHRPIG+GV GLAD F+ L MPFDS EA+QL
Sbjct: 401 DITKVVVYNLNRIIDVNYYPTPEARRSNMRHRPIGVGVNGLADAFMALRMPFDSPEARQL 460
Query: 547 NKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDM 606
NK IFETIY+ A+ SS+IA R+GPYETY GSP S G LQ D+WGV PSD WDW ++
Sbjct: 461 NKQIFETIYHAAVEASSDIAERDGPYETYEGSPASMGQLQYDLWGVTPSDLWDWASVKVK 520
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
+++ G+RNSLL+APMPTASTSQILG NECFEPYTSNIY+RRVL+GEF +V LL +L +
Sbjct: 521 VARTGLRNSLLLAPMPTASTSQILGFNECFEPYTSNIYTRRVLAGEFQIVCPWLLRELVD 580
Query: 667 MGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQS 726
+ LW +KN II ++GS+Q I IP+++KAIYKTVWEI QK ++D+A DRG +I SQS
Sbjct: 581 LKLWDDTMKNMIIANNGSIQSIIGIPDDIKAIYKTVWEISQKKVLDLAADRGAFICQSQS 640
Query: 727 LNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE 778
LN+H+ P G+LTS+HF+ W +GLKTGMYYLR+R AA AI+FTVD S+LKE
Sbjct: 641 LNVHLQSPTVGQLTSMHFYGWKKGLKTGMYYLRTRPAAQAIQFTVDQSILKE 692
>gi|443922933|gb|ELU42275.1| ribonucleoside-diphosphate reductase large chain [Rhizoctonia
solani AG-1 IA]
Length = 987
Score = 1029 bits (2660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 496/787 (63%), Positives = 601/787 (76%), Gaps = 39/787 (4%)
Query: 9 KQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMT 68
++E V FDKITAR+ KL YGL H DP+ V++KV GVY GVTT +LD LA+ETAA +T
Sbjct: 74 RKERVAFDKITARITKLCYGLDRNHVDPIEVTKKVIAGVYAGVTTVELDNLASETAAYLT 133
Query: 69 TNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNA 128
T HPDYA LAARI +SNLHK T+K+FS I D+YN+ N ++G A +I+ + Y+I+ +NA
Sbjct: 134 TKHPDYAILAARIAISNLHKETRKNFSAVIADLYNYVNPKNGRPAGMISKETYEIVQENA 193
Query: 129 ARLDSEIIYDRDFDYDY-----------------FGFKTLERSYLLKVQGKVVERPQHML 171
A LDS +IY+RDF Y+ FGFKTLERSYLL++ G+V ERPQHML
Sbjct: 194 AALDSAMIYERDFHYNLWGNFNLLIWYFTKTLISFGFKTLERSYLLRINGRVAERPQHML 253
Query: 172 MRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGI 231
MRVAVGIH +ID AI+TY++MS+R+FTHASPTLFNAGTP QLSSCFLV MKDDSI+GI
Sbjct: 254 MRVAVGIHGRNIDRAIETYNLMSERYFTHASPTLFNAGTPHPQLSSCFLVAMKDDSIDGI 313
Query: 232 YDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGG 291
YDTLK CA+ISK+AGGIG+ +HNIRATGSYI GTNG SNGIVPMLR ++ TARYVDQGG
Sbjct: 314 YDTLKTCAMISKTAGGIGLHIHNIRATGSYIAGTNGYSNGIVPMLRAYDATARYVDQGGN 373
Query: 292 KRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLF 351
KR GAFA+YLEPWHAD+FEFLDLRKNHGKEE RARDLFYALW+PDLFM+R++ +G W+LF
Sbjct: 374 KRPGAFAIYLEPWHADVFEFLDLRKNHGKEEVRARDLFYALWIPDLFMQRIEEDGDWTLF 433
Query: 352 CPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTC 411
CPNEAPGLAD G F LYTKYEKEG+ +K ++AQ LW+ IL +QIETG P+ML+KD
Sbjct: 434 CPNEAPGLADVHGAAFVELYTKYEKEGRGRKTIKAQKLWYAILDAQIETGGPFMLYKDAA 493
Query: 412 NKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVG 471
N KSNQQNLGTIKSSNLCTE+I+Y++P E AVCNLASIALP ++ + P H G
Sbjct: 494 NAKSNQQNLGTIKSSNLCTEIIEYSAPDEVAVCNLASIALPTFI--VNDPAAPH-----G 546
Query: 472 SRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTF 531
R +DF+KL EVT +V NLN IIDVNYYPV AR SN+RHRPIGIGVQGLAD F
Sbjct: 547 KR------YDFKKLHEVTKVVANNLNTIIDVNYYPVPEARNSNMRHRPIGIGVQGLADAF 600
Query: 532 ILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWG 591
+ L MPF+S EA++LN IFETIY+ A+ S E+A +GPY T+ GSP S+G LQ D+WG
Sbjct: 601 MCLKMPFESPEARELNLLIFETIYHAAVEASVEMAEAQGPYSTFQGSPASQGKLQFDLWG 660
Query: 592 VNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSG 651
V PS W+W L+ + + G+RNSLL+APMPTASTSQILG NECFEPYTSNIY+RRVL+G
Sbjct: 661 VTPSGLWEWEDLKAKVVRTGLRNSLLLAPMPTASTSQILGFNECFEPYTSNIYTRRVLAG 720
Query: 652 EFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLV 711
EF VV LL DL +GLW +KN II GS+Q I IP+++KAIYKTVWEI QKT++
Sbjct: 721 EFQVVCPWLLRDLVSLGLWDDDMKNMII-ASGSIQNINGIPDDIKAIYKTVWEISQKTVL 779
Query: 712 DMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTV 771
++A DRG +I SQSLN+H+ PN +L L L YLR+R AA AI+FTV
Sbjct: 780 NLAADRGAFICQSQSLNVHLQSPNARQL--------LPNLTRQFSYLRTRPAAQAIQFTV 831
Query: 772 DTSVLKE 778
D SV+K+
Sbjct: 832 DQSVIKQ 838
>gi|403222932|dbj|BAM41063.1| ribonucleoside-diphosphate reductase large chain [Theileria
orientalis strain Shintoku]
Length = 877
Score = 1029 bits (2660), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/776 (61%), Positives = 601/776 (77%), Gaps = 21/776 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+ R G++E V FDKI R++KLS GL D V+Q V G+Y G+ TS+LDELA
Sbjct: 50 MYVINRHGEKEDVSFDKILNRIRKLSLGLH-ALVDAPRVTQSVINGMYTGIRTSELDELA 108
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
A+T A M HPDY+ LAA I + NLHKNT F+E ++ ++ Y A LI++DV
Sbjct: 109 AQTCAYMAVTHPDYSRLAANITIDNLHKNTSSDFAEVVRTLF-EYKHVYDSNASLISEDV 167
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+ +M + R ++EI Y RDF YDYFGFKTLERSYLLK GK+VERPQHMLMRV+ GIH
Sbjct: 168 YNFVMMHKDRFNAEIDYSRDFQYDYFGFKTLERSYLLKANGKIVERPQHMLMRVSAGIHC 227
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI+ ++TYH+MSQR+FTHA+PTLFN+GT Q+SSCFL+ M+DDS+ GI++TL +CA
Sbjct: 228 GDIERTLQTYHLMSQRYFTHATPTLFNSGTRHPQMSSCFLLDMQDDSLAGIFNTLSQCAF 287
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+S+H IRA+GSYIRGTNG SNGIVPML++FN TA+YVDQGGGKRKG+FA+Y
Sbjct: 288 ISKSAGGIGLSIHKIRASGSYIRGTNGISNGIVPMLKIFNATAKYVDQGGGKRKGSFAIY 347
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+ LDLRKNHG E+ RARDLFYALW+PDLFM+RV+ N W+L CP+E GL
Sbjct: 348 LEPWHADIFKLLDLRKNHGSEDLRARDLFYALWIPDLFMKRVEENKNWTLMCPDECRGLY 407
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE+LYT YE++G KK V AQ LWF IL+SQIETGTPYML+KD CN KSNQQNL
Sbjct: 408 EVWGEEFEKLYTHYEQQGMGKKTVPAQKLWFAILQSQIETGTPYMLYKDACNAKSNQQNL 467
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLC E++QYTS E AVCNLAS+ALP++V + + + F
Sbjct: 468 GTIKSSNLCCEIVQYTSKDEVAVCNLASVALPKFVDK------------------EKKTF 509
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL ++ ++T NLN++ID NYYPV AR SN +HRP+G+GVQGLADTF+L+ PF+S
Sbjct: 510 DFKKLYDICRVITYNLNQVIDRNYYPVREARVSNFKHRPMGVGVQGLADTFMLMRYPFES 569
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDR-WD 599
EA++LN+ IFET+YY L S ++A + G YE+Y GSP SKG+LQ D+WG ++ WD
Sbjct: 570 EEARELNRRIFETMYYACLSESIDLARQYGTYESYPGSPASKGLLQFDLWGAKVDNKYWD 629
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L+ ++K G+RNSLL+APMPTASTSQILGNNE FEPYTSNIY RRVL GEF VVN H
Sbjct: 630 WDLLKQNLAKYGLRNSLLLAPMPTASTSQILGNNESFEPYTSNIYYRRVLCGEFFVVNPH 689
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL+DL E+GLW+ +K K+I +GS++ I ++P+ +K +YKTVWEIKQK ++DMA DRG
Sbjct: 690 LLNDLIELGLWNENMKQKLIAYNGSLKYIDEVPQHIKDLYKTVWEIKQKHIIDMAADRGV 749
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
+ID SQSLNIHM+QP F KLTS+HF+ W +GLKTG+YYLR++ A DAIKFTVD SV
Sbjct: 750 FIDQSQSLNIHMEQPTFSKLTSMHFYGWKKGLKTGVYYLRTQPATDAIKFTVDASV 805
>gi|426367047|ref|XP_004050549.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
[Gorilla gorilla gorilla]
Length = 757
Score = 1028 bits (2658), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 505/811 (62%), Positives = 618/811 (76%), Gaps = 57/811 (7%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG+QE V FDKIT+R++KL YGL+++ DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT HPDYA LAARI VSNLHK TKK FS+ ++D+YN+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKST 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI++ N RL+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRV+VGIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+AI+TY+++S+RWFTHASPTLFNAGT R QLSSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV++N WSL CPNE PGL
Sbjct: 301 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE+LY YEK+G+ +KVV+AQ LW+ I++SQ ETGTPYML+KD+CN+KSNQQNL
Sbjct: 361 EVWGEEFEKLYASYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YTS E AVCNLAS+AL YV + +
Sbjct: 421 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-------------------TSEHTY 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLAEVT +V NLNKIID+NYYPV A SN RHRPIGIGVQGLAD FIL+ PF+S
Sbjct: 462 DFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S ++A +GPYETY GSPVSKGILQ DMW V P+D WDW
Sbjct: 522 AEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 581
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+KN G + F + +VN HL
Sbjct: 582 KLLKEKIAKNN-------------------GFWKSF----------------WRIVNPHL 606
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE GLW +KN+II +GS+Q IP+IP++LK +YKTVWEI QKT++ MA +RG +
Sbjct: 607 LKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAF 666
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR+R AA+ I+FT++ LK+
Sbjct: 667 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 726
Query: 781 KVTDDDDA---KMAQMVCSLTNREECMACGS 808
KV+ +++ A MVCSL NR+EC+ CGS
Sbjct: 727 KVSKEEEEKERNTAAMVCSLENRDECLMCGS 757
>gi|312385901|gb|EFR30291.1| hypothetical protein AND_00204 [Anopheles darlingi]
Length = 775
Score = 1026 bits (2654), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 486/762 (63%), Positives = 604/762 (79%), Gaps = 34/762 (4%)
Query: 31 IEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNT 90
++ DPV ++ KV G+Y GVTT +LD LAAETAA MTT+H DYA LAAR+ VSNLHK T
Sbjct: 1 MDFVDPVAITLKVINGLYSGVTTQELDNLAAETAATMTTDHADYAILAARLAVSNLHKET 60
Query: 91 KKSFS---------------ETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEI 135
KK FS + + D+Y NE K+P+I++ Y +IM+NA RL+S I
Sbjct: 61 KKQFSGKRMTPLVIRQESLEKVMHDLYMMENEFLKTKSPMISNTHYKLIMENADRLNSAI 120
Query: 136 IYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQ 195
IYDRDF Y+YFGFKTLERSYLLK++GK+VERPQHMLMRVA+GIH +DIDSAI+TY+++S+
Sbjct: 121 IYDRDFGYNYFGFKTLERSYLLKIKGKIVERPQHMLMRVAIGIHGEDIDSAIETYNLLSE 180
Query: 196 RWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNI 255
R+FTHASPT+F A T R QLSSCFL+ M DDSIEGIYDTLK+CA+ISKSAGGIG++VH I
Sbjct: 181 RYFTHASPTMFAAATQRPQLSSCFLLTMSDDSIEGIYDTLKQCALISKSAGGIGLNVHCI 240
Query: 256 RATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLR 315
RA G+YI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+YLEPWH D+FEFLDL+
Sbjct: 241 RAKGTYIAGTNGISNGLVPMLRVYNNTARYVDQGGNKRPGAFAIYLEPWHGDVFEFLDLK 300
Query: 316 KNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYE 375
KN GKEE RARD+FYALW+PDLFM+RV++N +WSL CP++ PGL++ WG EFE+LYT YE
Sbjct: 301 KNTGKEEVRARDMFYALWIPDLFMQRVEANEMWSLMCPHDCPGLSETWGEEFEKLYTGYE 360
Query: 376 KEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQY 435
+EG+ + V+AQ+LWF I++SQ+ETG PYML+KD CN+KSNQQN+GTIK SNLCTE+++Y
Sbjct: 361 REGRFTRQVKAQDLWFAIIESQVETGVPYMLYKDACNRKSNQQNIGTIKCSNLCTEIVEY 420
Query: 436 TSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTEN 495
+S E AVCNLASIAL +V+ +R +DF KL EV VT+N
Sbjct: 421 SSKDEIAVCNLASIALNMFVK-------------------PDRTYDFAKLKEVAKTVTKN 461
Query: 496 LNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIY 555
LNKIID+NYYPV A+RSN+RHRPIGIGVQG+AD FIL+ P++S EAQ LN+ +FETIY
Sbjct: 462 LNKIIDINYYPVPEAKRSNMRHRPIGIGVQGMADAFILMRHPYESEEAQLLNQQMFETIY 521
Query: 556 YHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNS 615
+ AL S E+AA++GPYE+Y GSPVSKGILQ DMW P++ WDW L+ I +GVRNS
Sbjct: 522 FGALEASCELAAQDGPYESYDGSPVSKGILQYDMWEKKPTELWDWAELKRNIVTHGVRNS 581
Query: 616 LLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIK 675
LL+APMPTAST+QILGNNE FEPYTSN+Y+RRVLSGEF VVN HLL DLTE+ LW +K
Sbjct: 582 LLLAPMPTASTAQILGNNESFEPYTSNVYNRRVLSGEFQVVNHHLLKDLTELELWDDEMK 641
Query: 676 NKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPN 735
NKI+ +GS+QKI +IP+ ++ +YKTVWEI KT + MA DRG +ID SQS NIH+ +PN
Sbjct: 642 NKILAQNGSIQKIEEIPQHIRNLYKTVWEISVKTCIKMAADRGAFIDQSQSFNIHVAEPN 701
Query: 736 FGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
+GKLTS+HF+ W GLKTGMYYLR++ A +AI+FTVD S L+
Sbjct: 702 YGKLTSIHFYGWKMGLKTGMYYLRTKPAVNAIQFTVDKSKLQ 743
>gi|237841871|ref|XP_002370233.1| ribonucleoside-diphosphate reductase, large subunit, putative
[Toxoplasma gondii ME49]
gi|211967897|gb|EEB03093.1| ribonucleoside-diphosphate reductase, large subunit, putative
[Toxoplasma gondii ME49]
gi|221482702|gb|EEE21040.1| ribonucleoside-diphosphate reductase, large subunit, putative
[Toxoplasma gondii GT1]
gi|221503104|gb|EEE28810.1| ribonucleoside-diphosphate reductase, large subunit, putative
[Toxoplasma gondii VEG]
Length = 877
Score = 1026 bits (2652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/776 (61%), Positives = 610/776 (78%), Gaps = 21/776 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVV R G++E V FD+I R++KLS+GL DP V+Q V G+Y G+ TS+LD+LA
Sbjct: 60 MYVVNRRGEEEPVSFDQILKRIEKLSFGLH-PLVDPARVAQAVINGMYAGIRTSELDDLA 118
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
A+T+A M +HPD++ LAARI + NLHKNT +F T+ D + Y ++ G +A L++ +V
Sbjct: 119 AQTSAYMAASHPDFSRLAARIAIDNLHKNTTDNFL-TVIDQLHGYVDKLGREAKLVSTEV 177
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+ + +N L+ + Y RDFDYDYFGFKTLERSYLLK+ ++VERPQHMLMRVA GIH
Sbjct: 178 YEFVRENEQALNEALNYSRDFDYDYFGFKTLERSYLLKIHDRIVERPQHMLMRVACGIHC 237
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D++ AI+TY +MSQ++FTHA+PTLFNAGTPR Q+SSCFL+ M++DSI+GI+ TLK+CA+
Sbjct: 238 GDVEKAIETYELMSQKFFTHATPTLFNAGTPRPQMSSCFLLTMQEDSIDGIFSTLKQCAL 297
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGG+G++V +IRAT SYIRGTNG SNG++PMLRVFND ARYVDQGGGKRKG+ A+Y
Sbjct: 298 ISKTAGGLGLAVTDIRATNSYIRGTNGYSNGLLPMLRVFNDAARYVDQGGGKRKGSLAIY 357
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH D+F+FLD++KNHGKEE RARDLF ALW+PDLFMERV N W+L CPNE PGL
Sbjct: 358 LEPWHFDVFDFLDIKKNHGKEERRARDLFCALWIPDLFMERVNDNAGWTLMCPNECPGLT 417
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EF+ LY +YE+EG+ +K + AQ+LWF IL++QIETGTPYML+KD CN+KSNQ+NL
Sbjct: 418 EVWGDEFKELYERYEREGRGRKTIPAQHLWFAILQAQIETGTPYMLYKDACNRKSNQKNL 477
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTEV++YTS E AVCNLAS++LP++V ++R F
Sbjct: 478 GTIKCSNLCTEVVEYTSKDEVAVCNLASVSLPKFVDR------------------ESRTF 519
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D+E L + ++T NLN++ID NYYPV A++SNLRHRP+G+GVQGLAD F+LL PFDS
Sbjct: 520 DYEHLKRIVKVMTRNLNRVIDRNYYPVPEAKKSNLRHRPVGLGVQGLADAFMLLRYPFDS 579
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRW-D 599
EA+ LN++IFE IY+ AL S E+AA EGPY TY GSPVS+GILQ DMWGV PS D
Sbjct: 580 PEARVLNRNIFECIYFAALEASCELAAEEGPYATYEGSPVSQGILQFDMWGVTPSSGLCD 639
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W GLR+ I +GVRNSLLV+PMPTASTSQILGNNE FEPYTSNIY RRVLSGEF VVN H
Sbjct: 640 WDGLREKIKAHGVRNSLLVSPMPTASTSQILGNNEAFEPYTSNIYYRRVLSGEFFVVNPH 699
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL DL E LWS +K ++I +GSVQ + IP++LKA+YKTVWEIKQ+ ++D+A+DR
Sbjct: 700 LLRDLLERDLWSEDVKQQLIAHNGSVQNMDVIPDDLKALYKTVWEIKQRVVLDLAIDRAP 759
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
+ID S SLNIHM P + KL+++HF+ W GLKTG+YYLR++AAADAIKFTVD+ +
Sbjct: 760 FIDQSHSLNIHMVNPTYAKLSTMHFYGWRGGLKTGLYYLRTQAAADAIKFTVDSQL 815
>gi|95007128|emb|CAJ20349.1| ribonucleoside-diphosphate reductase, large chain [Toxoplasma
gondii RH]
Length = 855
Score = 1026 bits (2652), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/776 (61%), Positives = 610/776 (78%), Gaps = 21/776 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVV R G++E V FD+I R++KLS+GL DP V+Q V G+Y G+ TS+LD+LA
Sbjct: 38 MYVVNRRGEEEPVSFDQILKRIEKLSFGLH-PLVDPARVAQAVINGMYAGIRTSELDDLA 96
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
A+T+A M +HPD++ LAARI + NLHKNT +F T+ D + Y ++ G +A L++ +V
Sbjct: 97 AQTSAYMAASHPDFSRLAARIAIDNLHKNTTDNFL-TVIDQLHGYVDKLGREAKLVSTEV 155
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+ + +N L+ + Y RDFDYDYFGFKTLERSYLLK+ ++VERPQHMLMRVA GIH
Sbjct: 156 YEFVRENEQALNEALNYSRDFDYDYFGFKTLERSYLLKIHDRIVERPQHMLMRVACGIHC 215
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D++ AI+TY +MSQ++FTHA+PTLFNAGTPR Q+SSCFL+ M++DSI+GI+ TLK+CA+
Sbjct: 216 GDVEKAIETYELMSQKFFTHATPTLFNAGTPRPQMSSCFLLTMQEDSIDGIFSTLKQCAL 275
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGG+G++V +IRAT SYIRGTNG SNG++PMLRVFND ARYVDQGGGKRKG+ A+Y
Sbjct: 276 ISKTAGGLGLAVTDIRATNSYIRGTNGYSNGLLPMLRVFNDAARYVDQGGGKRKGSLAIY 335
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH D+F+FLD++KNHGKEE RARDLF ALW+PDLFMERV N W+L CPNE PGL
Sbjct: 336 LEPWHFDVFDFLDIKKNHGKEERRARDLFCALWIPDLFMERVNDNAGWTLMCPNECPGLT 395
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EF+ LY +YE+EG+ +K + AQ+LWF IL++QIETGTPYML+KD CN+KSNQ+NL
Sbjct: 396 EVWGDEFKELYERYEREGRGRKTIPAQHLWFAILQAQIETGTPYMLYKDACNRKSNQKNL 455
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTEV++YTS E AVCNLAS++LP++V ++R F
Sbjct: 456 GTIKCSNLCTEVVEYTSKDEVAVCNLASVSLPKFVDR------------------ESRTF 497
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D+E L + ++T NLN++ID NYYPV A++SNLRHRP+G+GVQGLAD F+LL PFDS
Sbjct: 498 DYEHLKRIVKVMTRNLNRVIDRNYYPVPEAKKSNLRHRPVGLGVQGLADAFMLLRYPFDS 557
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRW-D 599
EA+ LN++IFE IY+ AL S E+AA EGPY TY GSPVS+GILQ DMWGV PS D
Sbjct: 558 PEARVLNRNIFECIYFAALEASCELAAEEGPYATYEGSPVSQGILQFDMWGVTPSSGLCD 617
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W GLR+ I +GVRNSLLV+PMPTASTSQILGNNE FEPYTSNIY RRVLSGEF VVN H
Sbjct: 618 WDGLREKIKAHGVRNSLLVSPMPTASTSQILGNNEAFEPYTSNIYYRRVLSGEFFVVNPH 677
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL DL E LWS +K ++I +GSVQ + IP++LKA+YKTVWEIKQ+ ++D+A+DR
Sbjct: 678 LLRDLLERDLWSEDVKQQLIAHNGSVQNMDVIPDDLKALYKTVWEIKQRVVLDLAIDRAP 737
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
+ID S SLNIHM P + KL+++HF+ W GLKTG+YYLR++AAADAIKFTVD+ +
Sbjct: 738 FIDQSHSLNIHMVNPTYAKLSTMHFYGWRGGLKTGLYYLRTQAAADAIKFTVDSQL 793
>gi|195456500|ref|XP_002075166.1| GK23355 [Drosophila willistoni]
gi|194171251|gb|EDW86152.1| GK23355 [Drosophila willistoni]
Length = 768
Score = 1025 bits (2651), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/740 (64%), Positives = 591/740 (79%), Gaps = 22/740 (2%)
Query: 36 PVL---VSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKK 92
PVL ++ +V G+Y GVTT +LD LAAE AA +T NH DYA LAARI VSNLHK TKK
Sbjct: 27 PVLEVSITLQVINGLYCGVTTQELDNLAAEIAAGLTCNHADYAILAARIAVSNLHKETKK 86
Query: 93 SFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLE 152
FSE +++Y+H N+ + +P+++ Y+I+ NA RL+S +IYDRDF Y+YFGFKTLE
Sbjct: 87 VFSEVFEELYHHVNKETNNPSPMVSSYHYNIVKNNADRLNSAMIYDRDFGYNYFGFKTLE 146
Query: 153 RSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPR 212
RSYLLK+ GKV ERPQHMLMRVA+GIH +DID+A++TY+++S+R+FTHASPTLF A T R
Sbjct: 147 RSYLLKINGKVAERPQHMLMRVAIGIHGEDIDAAVETYNLLSERYFTHASPTLFAAATNR 206
Query: 213 AQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGI 272
QLSSCFL+ M DSIEGI+ T+++CA+ISKSAGGIG++VH IRA G+ I GTNGTSNG+
Sbjct: 207 PQLSSCFLLTMTSDSIEGIFKTVEQCAMISKSAGGIGLNVHCIRAKGTSICGTNGTSNGL 266
Query: 273 VPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYAL 332
VPMLRVFN+ ARYVDQGGGKR GAFA+YLEPWH+DIFEFLDL++N GKEEHRARDLFYAL
Sbjct: 267 VPMLRVFNNVARYVDQGGGKRPGAFAIYLEPWHSDIFEFLDLKRNTGKEEHRARDLFYAL 326
Query: 333 WVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFE 392
W+PDLFM+RV++N WSL CP++ PGL D WG +FE LY KYEKEG A ++V+AQ+LWF
Sbjct: 327 WIPDLFMKRVEANEDWSLMCPHKCPGLEDVWGDKFEELYVKYEKEGLANRIVKAQSLWFA 386
Query: 393 ILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALP 452
I++SQ+ETG PYMLFKD+CNKKSNQQN+GTIK SNLCTEV++Y++P E AVCNLASIAL
Sbjct: 387 IIESQVETGNPYMLFKDSCNKKSNQQNVGTIKCSNLCTEVVEYSAPDEIAVCNLASIALN 446
Query: 453 RYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARR 512
+V + ++ +DF+KL EVT IV +NLNKIIDVNYYP+ A++
Sbjct: 447 MFV-------------------TTDKTYDFKKLKEVTKIVAKNLNKIIDVNYYPLPEAKK 487
Query: 513 SNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPY 572
SNL+HRPIGIGVQGLAD IL+ +P++S +A LN+ IFETIY+ AL S E+A GPY
Sbjct: 488 SNLKHRPIGIGVQGLADALILMRLPYESKQACLLNQQIFETIYFGALEASCELAQMYGPY 547
Query: 573 ETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGN 632
ET+ GSP S+GILQ DMW PSD WDW L+ I ++G+RNSLLVAPMPTAST+QI+GN
Sbjct: 548 ETFKGSPASRGILQYDMWNKKPSDLWDWNKLKAAIKEHGIRNSLLVAPMPTASTAQIMGN 607
Query: 633 NECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIP 692
NE FEPYT+NIY+RRVLSGEF VVN HLL DLTE+ LW +KNKI+ GS+Q I IP
Sbjct: 608 NESFEPYTTNIYTRRVLSGEFQVVNHHLLRDLTELDLWDDDMKNKIVSSRGSIQNIEVIP 667
Query: 693 EELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLK 752
+ ++ +YKTVWEI K+ + MA DRG +ID SQS NIH+ +PN+GKLTS+HF++W GLK
Sbjct: 668 QNVRDLYKTVWEISVKSTIKMAADRGAFIDQSQSFNIHVAEPNYGKLTSIHFYSWKSGLK 727
Query: 753 TGMYYLRSRAAADAIKFTVD 772
TGMYYLR++ AA AI+FTVD
Sbjct: 728 TGMYYLRTKPAAHAIQFTVD 747
>gi|373447499|gb|AEY72884.1| ribonucleotide reductase large subunit [Vaccinia virus]
gi|373449162|gb|AEY74540.1| ribonucleotide reductase large subunit [Vaccinia virus]
Length = 763
Score = 1025 bits (2649), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 490/787 (62%), Positives = 603/787 (76%), Gaps = 31/787 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+ +H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA TT HPDYA LAARI VSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI+ K +L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRVAVGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIYDTLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DI FLDL+KN G EEHR RDLF ALW+PDLFM+RV+ +G WSL CP+E PGL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFERLYT YE+E + K +++A+ +W I++SQIETGTP++L+KD CNKKSNQQNL
Sbjct: 361 NVWGDEFERLYTLYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+IQY E AVCNLAS+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLASVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL +V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL PFDS
Sbjct: 461 DFLKLKDVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S E+A +EGPY+TY GS S GILQ D+ W+W
Sbjct: 521 LEAQDLNKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDL--------WNW 572
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 573 EPLKDKIRTYGLRNSLLVAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 632
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L LTE LW+ IKN+I+ D GS+Q +PE++K +YKT+WEI QKT++ MA DRG +
Sbjct: 633 LRVLTERKLWNDEIKNRIMADGGSIQN-TNLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 691
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQS+NIH+ P++ KLTS+HF+ W GLKTGMYYLR++ A+ I+FT+D +K P
Sbjct: 692 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLDKDKIK--P 749
Query: 781 KVTDDDD 787
V D +
Sbjct: 750 LVVCDSE 756
>gi|294471317|gb|ADE80903.1| RR1 [Spodoptera litura NPV]
Length = 772
Score = 1025 bits (2649), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/775 (61%), Positives = 605/775 (78%), Gaps = 21/775 (2%)
Query: 2 YVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAA 61
YV KRDG++E V KI R++K YGL + +P ++++V G+Y GVTT +LD L A
Sbjct: 6 YVTKRDGRKEDVSVRKIKYRIEKQCYGLDMYFVNPASLTRRVVQGIYPGVTTVELDNLIA 65
Query: 62 ETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVY 121
ETAA+MT +H DY+ LAAR+ VSNLHK TK F I DMY ++++G P+I+D Y
Sbjct: 66 ETAASMTIDHSDYSLLAARLAVSNLHKETKDLFFNVIVDMYEAIDQKTGAATPMISDFHY 125
Query: 122 DIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKD 181
II NA RL+S I++DRDF+YDYFGFKT++RSYL K+ G VERPQ+M+MRVA+GIH
Sbjct: 126 GIIAANADRLNSAIMHDRDFNYDYFGFKTMQRSYLFKINGITVERPQYMMMRVAIGIHGR 185
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAII 241
DID+AI+TY++MS +FTHASPTLF+A TP+AQ+SSCFLV +K+DSIEGIYDTLK+CA+I
Sbjct: 186 DIDAAIETYNLMSNGYFTHASPTLFSAATPKAQMSSCFLVAIKEDSIEGIYDTLKQCAMI 245
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SKS GGIG VHN+RA GS + G +G +NG+VPMLRV+N+TARYV+QGG KR GAFAVY+
Sbjct: 246 SKSGGGIGFHVHNVRAKGSSVAGVDGAANGLVPMLRVYNNTARYVNQGGNKRPGAFAVYV 305
Query: 302 EPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLAD 361
EPWHAD+F+FLDL+KN GKEE RAR+LFYALW+PDLFM RV+++ +WSL CP ++PGLAD
Sbjct: 306 EPWHADVFDFLDLKKNTGKEEVRARELFYALWIPDLFMRRVETDAMWSLMCPMQSPGLAD 365
Query: 362 CWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG 421
C G EFE LY KYEK+G+ K V AQ LW I+++Q+ETGTPYML+KD+CN+KSNQ NLG
Sbjct: 366 CHGVEFEALYEKYEKQGRYVKRVSAQTLWRAIIEAQVETGTPYMLYKDSCNRKSNQSNLG 425
Query: 422 TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVR-EMGVPMESHPSKLVGSRGSKNRYF 480
TIK SNLCTE+++YTS E AVCNLASIA+ ++V + GV +
Sbjct: 426 TIKCSNLCTEIVEYTSKDEVAVCNLASIAVNKFVAPQPGV-------------------Y 466
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DFE+L E+T IVT NLN+IID N P+ A RSN R+RPIGIGVQG+AD F+ + MP++S
Sbjct: 467 DFERLKEITKIVTRNLNRIIDANQCPLREAERSNQRNRPIGIGVQGMADAFVTMRMPYES 526
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMW-GVNPSDRWD 599
A +LNK IFETIYY AL S E+AA++GPYETY GSP S+G LQ DMW G PS+ WD
Sbjct: 527 DAAAELNKKIFETIYYGALEASCELAAKDGPYETYKGSPASRGELQYDMWNGATPSNLWD 586
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L+ ISK G+RNSLL+APMPTAST+QILGNNE FEP+TSNIY RRVLSGEF VVN+H
Sbjct: 587 WSLLKSKISKYGLRNSLLLAPMPTASTAQILGNNESFEPFTSNIYQRRVLSGEFQVVNRH 646
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
L+ DL +GLW+ +KN I+Y++GSVQ I IP E++ +YKTVWE+ +T++ MA DRG
Sbjct: 647 LVKDLAAIGLWNDTMKNLIMYNNGSVQNIESIPFEIRQLYKTVWEMSMRTMIRMAADRGA 706
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTS 774
+ID SQS N++M +P++GKLTS+HF+AW GLKTGMYYLR++ AA+AI+FTVD +
Sbjct: 707 FIDQSQSFNVYMAEPSYGKLTSIHFYAWKMGLKTGMYYLRTKPAANAIQFTVDKT 761
>gi|410075974|ref|XP_003955569.1| hypothetical protein KAFR_0B01350 [Kazachstania africana CBS 2517]
gi|372462152|emb|CCF56434.1| hypothetical protein KAFR_0B01350 [Kazachstania africana CBS 2517]
Length = 847
Score = 1024 bits (2647), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/775 (59%), Positives = 611/775 (78%), Gaps = 15/775 (1%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG++E V FDKITAR+++LSYGL + D ++Q++ +G+Y+GVTT +LD LA
Sbjct: 1 MYVIKRDGRKEPVRFDKITARVERLSYGLDPKQVDAARITQRIISGIYEGVTTQELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AET A MTT HPDY +LAAR+ +SNLHK TKK FS+ + D+YN+ N +G AP+I+ V
Sbjct: 61 AETCAYMTTIHPDYGTLAARLAISNLHKQTKKQFSQVMDDLYNYVNPTTGKHAPVISQRV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
++IIMKN +DS I+YDRD+ ++YFG+KTLERSYLLK+ G+V ERPQH+LMRVA+GIH
Sbjct: 121 HEIIMKNKDVIDSTIVYDRDYKFNYFGYKTLERSYLLKINGQVAERPQHLLMRVAIGIHM 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD+++A +TY++MS+++F HA+PTLFNAGTPR Q+SSCFLV MKDDSI+GI++TLKECA+
Sbjct: 181 DDLEAAFETYNLMSEKYFIHATPTLFNAGTPRPQMSSCFLVSMKDDSIDGIFETLKECAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV VH+IR TGSYI+GTNGTS G++P++ V+N TARYVDQGG +R GA A +
Sbjct: 241 ISKSAGGIGVHVHDIRGTGSYIQGTNGTSKGLMPVVGVYNTTARYVDQGGNRRPGAIAFF 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH D+F+F+++RKNHG E++RARDLF ALW+PDLFM+RV+++ W+LF +EAPGL+
Sbjct: 301 LEPWHPDVFDFIEMRKNHGDEKYRARDLFPALWIPDLFMKRVEADTKWTLFSSSEAPGLS 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE L+ +YE+EG+ K ++A+ LW IL +Q ETGTP+M +KD N+KSNQ+NL
Sbjct: 361 DVYGDEFEALFERYEREGRG-KTIKARKLWQAILDAQTETGTPFMCYKDAANQKSNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLC E+I+Y++P ETAVCNLAS+ LP ++ S +K +
Sbjct: 420 GTIKSSNLCCEIIEYSNPEETAVCNLASVCLPTFIEY--------------SEDNKTSTY 465
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+FEKL +++ ++T NLN++ID NYYPV AR+SN++HRPI +GVQGLADTF+LL +PF+S
Sbjct: 466 NFEKLHKISKVITRNLNRVIDNNYYPVPEARKSNMKHRPIALGVQGLADTFMLLRLPFES 525
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA +LNK IFET+Y+ +L S E+A EG YET+ GSP S+GILQ D+W P WDW
Sbjct: 526 DEATKLNKQIFETMYHASLEASCELAQEEGAYETFQGSPASQGILQMDLWNSKPFGMWDW 585
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I K G+RNSL +APMPTASTSQI+G NECFEP TSN+Y RR +SGEF +VN +L
Sbjct: 586 ETLRKDIVKYGIRNSLTMAPMPTASTSQIMGFNECFEPVTSNMYQRRTISGEFQIVNPYL 645
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W +K +I +GS+Q +P +P+E+K +YKTVWEI QK ++DMA DR Y
Sbjct: 646 LRDLVDLGIWDDGMKQYLITQNGSIQDLPNVPDEIKELYKTVWEISQKKILDMAADRSIY 705
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
ID S SLN+ + P GK+TS+HF+ W +GLKTGMYYLR++AA+ AI+FT+D SV
Sbjct: 706 IDQSHSLNLFIRAPTMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQSV 760
>gi|290984045|ref|XP_002674738.1| ribonucleotide reductase [Naegleria gruberi]
gi|284088330|gb|EFC41994.1| ribonucleotide reductase [Naegleria gruberi]
Length = 812
Score = 1023 bits (2645), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/829 (58%), Positives = 624/829 (75%), Gaps = 43/829 (5%)
Query: 3 VVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAE 62
+VK+ G++E +KI RL+ + L + D ++ +K+ ++ +TT +LD L AE
Sbjct: 4 IVKKSGEKELFSSEKIRIRLQDHTKDLYHINIDSII--EKLQLEIHNDITTEKLDNLIAE 61
Query: 63 TAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYD 122
A M +HPDY LA R+ VS LHK+TK FSE + D+ N + R+ L +PLI+++V++
Sbjct: 62 CIAYMAYSHPDYLKLAGRVKVSTLHKHTKSKFSEVVHDLRNFIHPRTNLPSPLISEEVFN 121
Query: 123 IIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKV-QGKVVERPQHMLMRVAVGIHKD 181
++ N LD I +RDF +DYFG+KTLERSYLLK+ ++ ERPQHM MRV++GIH
Sbjct: 122 VVAANVDVLDQAIKSERDFQFDYFGYKTLERSYLLKLADSRIAERPQHMFMRVSLGIHGG 181
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAII 241
DI+ AI+TY ++S F HASPTLFNAGTP Q+SSCFLV MKDDSI GIYDTLK CA+I
Sbjct: 182 DIERAIQTYDLLSSGMFIHASPTLFNAGTPIPQMSSCFLVSMKDDSIHGIYDTLKTCALI 241
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SKSAGGIG+SVHNIRA+GSYIRGTNGTSNG++PMLRVFNDTARYVDQGGGKRKGAFA+YL
Sbjct: 242 SKSAGGIGLSVHNIRASGSYIRGTNGTSNGLIPMLRVFNDTARYVDQGGGKRKGAFAIYL 301
Query: 302 EPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLAD 361
EPWH+DIF+FLDLRKNHGKEE RARDLF LWV DLFM+RV+ + WSLFCPNEA GLAD
Sbjct: 302 EPWHSDIFDFLDLRKNHGKEEIRARDLFLGLWVNDLFMQRVKDDAEWSLFCPNEAQGLAD 361
Query: 362 CWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG 421
WG EF +LYTKYE+EGKAK+ ++AQ LWF I+++QIETG PYML+KD+CN+KSNQQNLG
Sbjct: 362 VWGEEFNQLYTKYEREGKAKRTIKAQELWFAIIEAQIETGVPYMLYKDSCNRKSNQQNLG 421
Query: 422 TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFD 481
TIKSSNLCTE+I++T+P E AVCNLASIALP+YV E + + +D
Sbjct: 422 TIKSSNLCTEIIEFTAPDEVAVCNLASIALPKYVNE------------------ETQTYD 463
Query: 482 FEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDST 541
+KL EV I T NLNKIID NYYPVE A++SN RHRPIG+GVQGLAD FI + +PF+S
Sbjct: 464 HQKLYEVVKIATYNLNKIIDKNYYPVEEAKKSNFRHRPIGLGVQGLADAFIKMRLPFESE 523
Query: 542 EAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVN-------- 593
EA+ LN++IFETIY+ A+ S E+A EG YETY GSP+SKGI Q + W
Sbjct: 524 EAKNLNREIFETIYFAAMTCSMELAKVEGTYETYEGSPISKGIFQHEFWTREGEPFEGKT 583
Query: 594 -PSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
S RWDW GLR + ++GVRNSLLVAPMPTASTSQILGNNECFEPYTSN+Y+RRVLSGE
Sbjct: 584 ITSGRWDWEGLRQQVLQHGVRNSLLVAPMPTASTSQILGNNECFEPYTSNVYTRRVLSGE 643
Query: 653 FVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVD 712
+ V+N+HL+ DL ++ +W+P I N+II + GS+Q I IP+++K +YKTVWEIKQ++L+D
Sbjct: 644 YPVINRHLVADLIKIDMWNPTIVNQIIGNRGSIQNIQGIPDDIKELYKTVWEIKQRSLLD 703
Query: 713 MAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
+A++R +ID SQSLN+ + P+ K++S+HF+AW +GLKTGMYYLR++ AADAI+FTVD
Sbjct: 704 LAIERSPFIDQSQSLNVFISIPSVSKMSSMHFYAWSKGLKTGMYYLRTQPAADAIQFTVD 763
Query: 773 TSVLKENPKVTDDDDAKMAQ--MVCSLTNREE-----------CMACGS 808
+++K++ + ++ K + +VC R + C+ CG+
Sbjct: 764 PNMMKQSVSTSQAEEPKQEEEVIVCKRKKRGQAPPEGEEDEEECLVCGA 812
>gi|449139070|gb|AGE89875.1| RR1 [Spodoptera littoralis NPV]
Length = 828
Score = 1022 bits (2643), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/773 (61%), Positives = 603/773 (78%), Gaps = 21/773 (2%)
Query: 2 YVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAA 61
YV KRDG++E V KI R++K YGL + +P ++++V G+Y GVTT +LD L A
Sbjct: 48 YVTKRDGRKEDVSVRKIKYRIEKQCYGLDMYFVNPASLTRRVVQGIYPGVTTVELDNLIA 107
Query: 62 ETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVY 121
ETAA+MT +H DY+ LAAR+ VSNLHK TK F I DMY ++++G P+I+D Y
Sbjct: 108 ETAASMTIDHSDYSLLAARLAVSNLHKETKDLFFNVIVDMYEAIDQKTGAATPMISDFHY 167
Query: 122 DIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKD 181
II NA RL+S I++DRDF+YDYFGFKT++RSYL K+ G VERPQ+M+MRVA+GIH
Sbjct: 168 GIIAANADRLNSAIMHDRDFNYDYFGFKTMQRSYLFKINGITVERPQYMMMRVAIGIHGR 227
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAII 241
DID+AI+TY++MS +FTHASPTLF+A TP+AQ+SSCFLV +K+DSIEGIYDTLK+CA+I
Sbjct: 228 DIDAAIETYNLMSNGYFTHASPTLFSAATPKAQMSSCFLVAIKEDSIEGIYDTLKQCAMI 287
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SKS GGIG VHN+RA GS + G +G +NG+VPMLRV+N+TARYV+QGG KR GAFAVY+
Sbjct: 288 SKSGGGIGFHVHNVRAKGSSVAGVDGAANGLVPMLRVYNNTARYVNQGGNKRPGAFAVYV 347
Query: 302 EPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLAD 361
EPWHAD+F+FLDL+KN GKEE RAR+LFYALW+PDLFM RV+++ +WSL CP ++PGLAD
Sbjct: 348 EPWHADVFDFLDLKKNTGKEEVRARELFYALWIPDLFMRRVETDAMWSLMCPMQSPGLAD 407
Query: 362 CWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG 421
C G EFE LY KYEK+G+ K V AQ LW I+++Q+ETGTPYML+KD+CN+KSNQ NLG
Sbjct: 408 CHGVEFEALYEKYEKQGRYVKRVSAQTLWRAIIEAQVETGTPYMLYKDSCNRKSNQSNLG 467
Query: 422 TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVR-EMGVPMESHPSKLVGSRGSKNRYF 480
TIK SNLCTE+++YTS E AVCNLASIA+ ++V + GV +
Sbjct: 468 TIKCSNLCTEIVEYTSKDEVAVCNLASIAVNKFVAPQPGV-------------------Y 508
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DFE+L E+T IVT NLN+IID N P+ A RSN R+RPIGIGVQG+AD F+ + MP++S
Sbjct: 509 DFERLKEITKIVTRNLNRIIDANQCPLREAERSNQRNRPIGIGVQGMADAFVTMRMPYES 568
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMW-GVNPSDRWD 599
A +LNK IFETIYY AL S E+AA++GPYETY GSP S+G LQ DMW G PS+ WD
Sbjct: 569 DAAAELNKKIFETIYYGALEASCELAAKDGPYETYKGSPASRGELQYDMWNGATPSNLWD 628
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L+ ISK G+RNSLL+APMPTAST+QILGNNE FEP+TSNIY RRVLSGEF VVN+H
Sbjct: 629 WSLLKSKISKYGLRNSLLLAPMPTASTAQILGNNESFEPFTSNIYQRRVLSGEFQVVNRH 688
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
L+ DL +GLW+ +KN I+Y++GSVQ I IP E++ +YKTVWE+ +T++ MA DRG
Sbjct: 689 LVKDLAAIGLWNDTMKNLIMYNNGSVQNIESIPFEIRQLYKTVWEMSMRTMIRMAADRGA 748
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
+ID SQS N++M +P++GKLTS+HF+AW GLKTGMYYLR++ A +AI+FTVD
Sbjct: 749 FIDQSQSFNVYMAEPSYGKLTSIHFYAWKMGLKTGMYYLRTKPAVNAIQFTVD 801
>gi|343173119|gb|AEL99262.1| ribonucleoside-diphosphate reductase subunit M1, partial [Silene
latifolia]
Length = 542
Score = 1021 bits (2640), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/542 (87%), Positives = 509/542 (93%)
Query: 236 KECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG 295
KECA+ISKSAGGIGVSVHNIRATGSYIRGTNG SNGI PMLRVFNDTARYVDQGGGKRKG
Sbjct: 1 KECAVISKSAGGIGVSVHNIRATGSYIRGTNGLSNGITPMLRVFNDTARYVDQGGGKRKG 60
Query: 296 AFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNE 355
AFAVYLEPWHADIF+FLDLRKNHGKEE RARDLFYALWVPDLFMERVQ++G WSLFCPNE
Sbjct: 61 AFAVYLEPWHADIFDFLDLRKNHGKEEQRARDLFYALWVPDLFMERVQTDGQWSLFCPNE 120
Query: 356 APGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKS 415
APGLADCWG EFE LYTKYE+ GKAKKVVQAQ+LWFEILK+Q+ETGTPYMLFKD+CN+KS
Sbjct: 121 APGLADCWGKEFETLYTKYERLGKAKKVVQAQSLWFEILKAQMETGTPYMLFKDSCNRKS 180
Query: 416 NQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGS 475
NQQNLGTIKSSNLCTE+IQYTSPTETAVCNLASIALPRYV+E GVP ES +KL GS S
Sbjct: 181 NQQNLGTIKSSNLCTEIIQYTSPTETAVCNLASIALPRYVKEKGVPSESQNTKLAGSLDS 240
Query: 476 KNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLG 535
NRYFDF+KLAEV +VT NLNKIIDVN+YPVETARRSN+RHRPIGIG+QGLADTFILLG
Sbjct: 241 GNRYFDFDKLAEVVEVVTTNLNKIIDVNFYPVETARRSNMRHRPIGIGIQGLADTFILLG 300
Query: 536 MPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPS 595
MPFDS EAQQLNKDIFETIYYHAL+TS ++AA+EGPYETY GSPVSKGILQPDMWGV PS
Sbjct: 301 MPFDSPEAQQLNKDIFETIYYHALKTSCKLAAKEGPYETYEGSPVSKGILQPDMWGVTPS 360
Query: 596 DRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVV 655
DRWDWG LR MI++ G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVV
Sbjct: 361 DRWDWGALRGMIAEKGIRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVV 420
Query: 656 VNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAV 715
VNKHLLHDLTEMGLWSP +KN+IIY+DGSVQKI +IP LKAIYKTVWEIKQKTLVDMAV
Sbjct: 421 VNKHLLHDLTEMGLWSPTLKNQIIYEDGSVQKIIEIPAHLKAIYKTVWEIKQKTLVDMAV 480
Query: 716 DRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
DRGC+ID SQSLNIHMDQ N GKLTSLHFHAW +GLKTGMYYLR+RAAADAIKFTVDT++
Sbjct: 481 DRGCFIDQSQSLNIHMDQANTGKLTSLHFHAWSKGLKTGMYYLRTRAAADAIKFTVDTTL 540
Query: 776 LK 777
LK
Sbjct: 541 LK 542
>gi|374724342|gb|EHR76422.1| ribonucleoside-diphosphate reductase alpha chain [uncultured marine
group II euryarchaeote]
Length = 797
Score = 1021 bits (2639), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/813 (59%), Positives = 621/813 (76%), Gaps = 23/813 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M VV R G++E V FD I +L+ L++GL DP V++ G+Y GVTT +LD+LA
Sbjct: 3 MQVVNRKGEREDVRFDAIHEKLRSLTHGLDPVWVDPGHVTKLTIEGLYDGVTTRELDQLA 62
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA++ + HPDY+ LAARI V +LH++TK++F++ I D+ + + S APLI+++V
Sbjct: 63 AETAASLASQHPDYSRLAARICVDDLHRSTKETFTDVITDLREYIDPESKKHAPLISEEV 122
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y IIM+NA L++ + Y RD +YDYFGFKTLERSYLL++ G++ ERPQHMLMRVAVGIH
Sbjct: 123 YSIIMENAEVLNNHVNYSRDHNYDYFGFKTLERSYLLRLNGEIAERPQHMLMRVAVGIHH 182
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+I A++TY +MSQ +FTHA+PTLFN+GTP Q+SSCFL+ M+DDS++GIYDTLK+CA+
Sbjct: 183 GNITKALETYDLMSQGYFTHATPTLFNSGTPTPQMSSCFLLTMQDDSLDGIYDTLKQCAL 242
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+S+H+IR+ GSYI+GTNG SNGIVPMLRVFNDTARYVDQGGGKRKG+ A+Y
Sbjct: 243 ISKSAGGIGLSIHHIRSKGSYIKGTNGESNGIVPMLRVFNDTARYVDQGGGKRKGSIAIY 302
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DI FLDL+KNHGKEE RARDLFYALW PDLFMERV+ N WS FCPNE PGL
Sbjct: 303 LEPWHPDILAFLDLKKNHGKEELRARDLFYALWTPDLFMERVEQNADWSFFCPNECPGLQ 362
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G +F+ LY KYE EG A++ + A+ +W ++++SQIETGTPYML+KD N+KSNQ+NL
Sbjct: 363 DAYGADFKALYEKYESEGLARETLPARTVWDKVVESQIETGTPYMLYKDAANEKSNQKNL 422
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+++YT+ E AVCNLASIAL +YV +N F
Sbjct: 423 GTIRSSNLCTEIMEYTAKDEVAVCNLASIALNKYV------------------DLENSTF 464
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+ + L +VT T NLN++IDVNYYPVE AR SN+RHRPIG+GVQGLADTF LL +PF+S
Sbjct: 465 NHQLLYDVTYHATGNLNRVIDVNYYPVEEARNSNMRHRPIGLGVQGLADTFALLQLPFES 524
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP-SDRWD 599
+A+ LNK+IFETIY+ A S + A EG Y T+ GSP SKG LQ D+WG+N S RWD
Sbjct: 525 PQARALNKEIFETIYFAACTASKDAAIAEGAYSTFQGSPASKGELQFDLWGMNDHSGRWD 584
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L+ I ++G+RNSLL+APMPTASTSQILGNNECFE +TSN+Y RR LSGEF+V+NKH
Sbjct: 585 WTTLKGEIIEHGMRNSLLLAPMPTASTSQILGNNECFEAFTSNLYVRRTLSGEFIVLNKH 644
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
L+ DL + LWS +K++I+ GS+Q I IPE +KA+YKT WEIKQ+ ++DMA DRG
Sbjct: 645 LVRDLIALDLWSLNMKDEILRHKGSIQAIEGIPEHIKALYKTTWEIKQRHVLDMAADRGA 704
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN 779
Y+D SQS+NIHM N K+TS+HF+ W +GLKTGMYYLR++AAADAI+FTV+ ++
Sbjct: 705 YVDQSQSMNIHMVDANPAKVTSMHFYGWKQGLKTGMYYLRTKAAADAIQFTVEAKKGEDQ 764
Query: 780 PKVTDDDDAK----MAQMVCSLTNREECMACGS 808
D A+ + + CSL ++C++CGS
Sbjct: 765 TVGGLADRAEEISSLEAIACSLDTPDDCLSCGS 797
>gi|335682|gb|AAA48274.1| Vaccinia virus matrix 1 protein [Vaccinia virus]
Length = 771
Score = 1019 bits (2634), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/786 (62%), Positives = 602/786 (76%), Gaps = 22/786 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+ +H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA TT HPDYA LAARI VSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI+ K +L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRVAVGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIYDTLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DI FLDL+KN G EEHR RDLF ALW+PDLFM+RV+ +G WSL CP+E PGL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCPDECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFERLYT YE+E + K +++A+ +W I++SQIETGTP++L+KD CNKKSNQQNL
Sbjct: 361 NVWGDEFERLYTLYERERRYKSIIKARVVWKAIIESQIETGTPFILYKDACNKKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+IQY E AVCNL S+AL +V + R F
Sbjct: 421 GTIKCSNLCTEIIQYADANEVAVCNLGSVALNMFV--------------IDGR------F 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL V ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FILL PFDS
Sbjct: 461 DFLKLKVVVKVIVRNLNKIIDINYYPIPEAEISNKRHRPIGIGVQGLADAFILLNYPFDS 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ +NK IFETIYY AL S E+A +EGPY+TY GS S GILQ D+W V PSD W+W
Sbjct: 521 LEAQDINKKIFETIYYGALEASCELAEKEGPYDTYVGSYASNGILQYDLWNVVPSDLWNW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+D I G+RNSLLVAP+P +QILGNNE EPYTSNIY+RRVLSGEF VVN HL
Sbjct: 581 EPLKDKIRTYGLRNSLLVAPLPLHQHAQILGNNESVEPYTSNIYTRRVLSGEFQVVNPHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L LTE LW+ IKN+I+ D GS+Q +PE++K +YKT+WEI QKT++ MA DRG +
Sbjct: 641 LRVLTERKLWNDEIKNRIMADGGSIQNT-NLPEDIKRVYKTIWEIPQKTIIKMAADRGAF 699
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQS+NIH+ P++ KLTS+HF+ W GLKTGMYYLR++ A+ I+FT+D +K P
Sbjct: 700 IDQSQSMNIHIADPSYSKLTSMHFYGWSLGLKTGMYYLRTKPASAPIQFTLDKDKIKP-P 758
Query: 781 KVTDDD 786
V D +
Sbjct: 759 VVCDSE 764
>gi|229597646|pdb|2WGH|A Chain A, Human Ribonucleotide Reductase R1 Subunit (Rrm1) In
Complex With Datp And Mg.
gi|229597647|pdb|2WGH|B Chain B, Human Ribonucleotide Reductase R1 Subunit (Rrm1) In
Complex With Datp And Mg
Length = 676
Score = 1019 bits (2634), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/688 (68%), Positives = 563/688 (81%), Gaps = 19/688 (2%)
Query: 75 ASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSE 134
A LAARI VSNLHK TKK FS+ ++D+YN+ N +G +P++A DI++ N RL+S
Sbjct: 2 AILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGKHSPMVAKSTLDIVLANKDRLNSA 61
Query: 135 IIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMS 194
IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRV+VGIHK+DID+AI+TY+++S
Sbjct: 62 IIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHKEDIDAAIETYNLLS 121
Query: 195 QRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHN 254
+RWFTHASPTLFNAGT R QLSSCFL+ MKDDSIEGIYDTLK+CA+ISKSAGGIGV+V
Sbjct: 122 ERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCALISKSAGGIGVAVSC 181
Query: 255 IRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDL 314
IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+YLEPWH DIFEFLDL
Sbjct: 182 IRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIYLEPWHLDIFEFLDL 241
Query: 315 RKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKY 374
+KN GKEE RARDLF+ALW+PDLFM+RV++N WSL CPNE PGL + WG EFE+LY Y
Sbjct: 242 KKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLDEVWGEEFEKLYASY 301
Query: 375 EKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQ 434
EK+G+ +KVV+AQ LW+ I++SQ ETGTPYML+KD+CN+KSNQQNLGTIK SNLCTE+++
Sbjct: 302 EKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNLGTIKCSNLCTEIVE 361
Query: 435 YTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTE 494
YTS E AVCNLAS+AL YV + +DF+KLAEVT +V
Sbjct: 362 YTSKDEVAVCNLASLALNMYV-------------------TSEHTYDFKKLAEVTKVVVR 402
Query: 495 NLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETI 554
NLNKIID+NYYPV A SN RHRPIGIGVQGLAD FIL+ PF+S EAQ LNK IFETI
Sbjct: 403 NLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFESAEAQLLNKQIFETI 462
Query: 555 YYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRN 614
YY AL S ++A +GPYETY GSPVSKGILQ DMW V P+D WDW L++ I+K G+RN
Sbjct: 463 YYGALEASCDLAKEQGPYETYEGSPVSKGILQYDMWNVTPTDLWDWKVLKEKIAKYGIRN 522
Query: 615 SLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPII 674
SLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HLL DLTE GLW +
Sbjct: 523 SLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHLLKDLTERGLWHEEM 582
Query: 675 KNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQP 734
KN+II +GS+Q IP+IP++LK +YKTVWEI QKT++ MA +RG +ID SQSLNIH+ +P
Sbjct: 583 KNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAFIDQSQSLNIHIAEP 642
Query: 735 NFGKLTSLHFHAWLRGLKTGMYYLRSRA 762
N+GKLTS+HF+ W +GLKTGMYYLR+RA
Sbjct: 643 NYGKLTSMHFYGWKQGLKTGMYYLRTRA 670
>gi|401395878|ref|XP_003879702.1| putative ribonucleoside-diphosphate reductase, large subunit
[Neospora caninum Liverpool]
gi|325114109|emb|CBZ49667.1| putative ribonucleoside-diphosphate reductase, large subunit
[Neospora caninum Liverpool]
Length = 886
Score = 1018 bits (2633), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/776 (61%), Positives = 606/776 (78%), Gaps = 21/776 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVV R G++E V FD+I R++KLS+GL DP V+Q V G+Y G+ TS+LD+LA
Sbjct: 61 MYVVNRRGEEEPVSFDQILKRIEKLSFGLH-PLVDPARVAQAVINGMYAGIRTSELDDLA 119
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
A+T+A M +HPD++ LAARI + NLHKNT +F I+ ++ Y ++ G +A L++ +V
Sbjct: 120 AQTSAYMAASHPDFSKLAARIAIDNLHKNTTDNFLTVIEQLHG-YVDKLGREAKLVSTEV 178
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+ + N L+ + Y RDF+YDYFGFKTLERSYLLK+ ++VERPQHMLMRVA GIH
Sbjct: 179 YEFVKANEKALNEALNYSRDFEYDYFGFKTLERSYLLKIHDRIVERPQHMLMRVACGIHC 238
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+++ A++TY +MSQ++FTHA+PTLFNAGTPR Q+SSCFL+ M++DSI+GI+ TLK+CA+
Sbjct: 239 GNVERAVETYELMSQKFFTHATPTLFNAGTPRPQMSSCFLLTMQEDSIDGIFSTLKQCAL 298
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGG+G++V +IRAT SYIRGTNG SNG++PMLRVFND ARYVDQGGGKRKG+ A+Y
Sbjct: 299 ISKTAGGLGLAVTDIRATNSYIRGTNGYSNGLLPMLRVFNDAARYVDQGGGKRKGSLAIY 358
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH D+F+FLD++KNHGKEE RARDLF ALW+PDLFMERV N W+L CPNE PGL
Sbjct: 359 LEPWHFDVFDFLDIKKNHGKEERRARDLFCALWIPDLFMERVNDNAGWTLMCPNECPGLT 418
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EF+ LY +YE+EG+ +K + AQ+LWF IL++QIETGTPYML+KD CN+KSNQ+NL
Sbjct: 419 EVWGEEFKELYERYEREGRGRKTIPAQHLWFAILQAQIETGTPYMLYKDACNRKSNQKNL 478
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTEV++YTS E AVCNLAS++LP++V + R F
Sbjct: 479 GTIKCSNLCTEVVEYTSKDEVAVCNLASVSLPKFVDR------------------ETRTF 520
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D+E L ++ ++T NLN++ID NYYPV A+ SNLRHRP+G+GVQGLAD F+LL PFDS
Sbjct: 521 DYEHLKKIVKVMTRNLNRVIDRNYYPVPEAKNSNLRHRPVGLGVQGLADAFMLLRYPFDS 580
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRW-D 599
EA+ LN++IFE IYY AL S E+AA EGPY TY GSP+S+GILQ DMWGV PS D
Sbjct: 581 PEARLLNRNIFECIYYAALEASCELAAEEGPYATYEGSPMSQGILQFDMWGVTPSSGLCD 640
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR+ I K+GVRNSLLV+PMPTASTSQILGNNE FEPYTSNIY RRVLSGEF VVN H
Sbjct: 641 WSALREKIKKHGVRNSLLVSPMPTASTSQILGNNEAFEPYTSNIYYRRVLSGEFFVVNPH 700
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL DL E LWS +K ++I +G V + IP++LKA+YKTVWEIKQ+ ++D+A+DR
Sbjct: 701 LLRDLLERDLWSEDVKQQLIAHNGCVLNMDVIPDDLKALYKTVWEIKQRVVLDLAIDRSP 760
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
YID S SLNIHM P + KL+++HF+ W GLKTG+YYLR++AAADAIKFTVD+ +
Sbjct: 761 YIDQSHSLNIHMVNPTYAKLSTMHFYGWRGGLKTGLYYLRTQAAADAIKFTVDSQL 816
>gi|353243108|emb|CCA74687.1| probable RNR1-ribonucleoside-diphosphate reductase large subunit
[Piriformospora indica DSM 11827]
Length = 916
Score = 1018 bits (2631), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 484/800 (60%), Positives = 605/800 (75%), Gaps = 63/800 (7%)
Query: 2 YVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPV-----------------------L 38
YV KR ++E V FDKITAR+ KL YGL +H DP+
Sbjct: 3 YVFKRGQRKERVQFDKITARINKLCYGLDPDHVDPIECVFRLLSSIGNRQTALTLSSLLR 62
Query: 39 VSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETI 98
+++KV GVY GVTT +LD LA+ETAA +TT HPDYA LAARI +SNLHK TKK+FS I
Sbjct: 63 ITKKVIAGVYNGVTTVELDNLASETAAYLTTKHPDYAILAARIAISNLHKETKKNFSAVI 122
Query: 99 KDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLK 158
+D+Y H +G A +I+ +VY+I+M NA DS IIYDRDF Y+YFGFKTLERSYLL+
Sbjct: 123 EDLYKH----NGKPAGMISKEVYEIVMANAELFDSTIIYDRDFHYNYFGFKTLERSYLLR 178
Query: 159 VQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSC 218
+ G+V ERPQHMLMRVAVGIH D+D ++TY++MS+R+FTHASPTLFNAGTP QLSSC
Sbjct: 179 INGRVAERPQHMLMRVAVGIHGRDVDRVVETYNLMSERYFTHASPTLFNAGTPHPQLSSC 238
Query: 219 FLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRV 278
FLV MKDDSIEGIYDTLK CA+ISK+AGGIG+++H IRATGSYI GTNG SNGIVPMLR
Sbjct: 239 FLVTMKDDSIEGIYDTLKTCAMISKTAGGIGLNIHCIRATGSYIAGTNGYSNGIVPMLRA 298
Query: 279 FNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLF 338
++ TARYVDQGG KR GAFA+Y+EPWHADIFEFLDLRKNHGKEE RARDLFYALW+PDLF
Sbjct: 299 YDATARYVDQGGNKRPGAFAIYIEPWHADIFEFLDLRKNHGKEEVRARDLFYALWIPDLF 358
Query: 339 MERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQI 398
M+R +S+G WSLFCPNEAPGL + +G EFE LYT+YE+EG+A+K ++AQ L+F ++++QI
Sbjct: 359 MKRAESDGDWSLFCPNEAPGLHEVYGDEFEELYTRYEREGRARKTIKAQKLFFAVMEAQI 418
Query: 399 ETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREM 458
ETG P+ML+KD N+KSNQQNLGTIKSSNLCTE+I+Y+SP E AVCNLAS+ALP +V
Sbjct: 419 ETGGPFMLYKDAANRKSNQQNLGTIKSSNLCTEIIEYSSPDEVAVCNLASLALPTFV--- 475
Query: 459 GVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHR 518
K+ +DF+KL +VT +V NLN+IIDVNYYPV AR+SN+RHR
Sbjct: 476 -----------------KDGAYDFQKLHDVTKVVAFNLNRIIDVNYYPVPEARKSNMRHR 518
Query: 519 PIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGS 578
PIGIGVQGLADTF+ L MPFDS +A++LN IFETIY+ A S+E+A GPYET+ GS
Sbjct: 519 PIGIGVQGLADTFMALRMPFDSVQAKELNIQIFETIYHAACEASAEMAEMMGPYETFEGS 578
Query: 579 PVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
P S+G LQ D+WGV P+ WDW L++ I+ +G+RNSLL+APMPTA+TS ++ ++
Sbjct: 579 PASEGKLQYDLWGVQPTGLWDWDSLKEKIAAHGMRNSLLLAPMPTATTSTLVEFSQ---- 634
Query: 639 YTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAI 698
G +V LL +L ++ LW+ +KN II GS+QKIP IP+++KAI
Sbjct: 635 ------------GSSRLVCPWLLRELVDLKLWNDEMKNMIIAHGGSIQKIPGIPDDVKAI 682
Query: 699 YKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYL 758
YKTVWEI QK ++D+A DRG +I SQSLN+H+ P+ G+LTS+HF+ W +GLKTGMYYL
Sbjct: 683 YKTVWEISQKKVIDLAADRGAFICQSQSLNVHLQNPSVGQLTSMHFYGWKKGLKTGMYYL 742
Query: 759 RSRAAADAIKFTVDTSVLKE 778
R+R AA AI+FTVD S+L +
Sbjct: 743 RTRPAAQAIQFTVDQSILNK 762
>gi|345107240|ref|YP_004821405.1| ribonucleotide reductase large subunit [Yoka poxvirus]
gi|344267314|gb|AEN03641.1| ribonucleotide reductase large subunit [Yoka poxvirus]
Length = 761
Score = 1018 bits (2631), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 481/776 (61%), Positives = 595/776 (76%), Gaps = 30/776 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG++E + FDKIT+R+KKL YGL ++H DPV ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRDGRKENIMFDKITSRIKKLCYGLDMDHIDPVNIAMKVIQGIYTGVTTKELDILA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE ++ TT HPDYA LAARI +SNLHK TKK FS+ ++D+Y K +I+ +V
Sbjct: 61 AEISSTCTTIHPDYAILAARISISNLHKETKKIFSDVVEDLY---------KESIISKNV 111
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
D++ K+ R++S II D DF Y+YFGFKTLE+SYLLK+ K+VERPQ+MLMRV++GIH+
Sbjct: 112 MDVVYKHKERINSSIINDNDFSYNYFGFKTLEKSYLLKINNKIVERPQYMLMRVSIGIHQ 171
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DIDS I+TY ++S++WF HASPTLFN+GT Q+SSCFL+ M DDSIEGIYDTLK CA+
Sbjct: 172 WDIDSVIETYKLLSEKWFIHASPTLFNSGTCHPQMSSCFLLNMIDDSIEGIYDTLKRCAL 231
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGIVPMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 232 ISKMAGGIGISISNIRASGSYISGTNGISNGIVPMLRVYNNTARYIDQGGNKRPGVMAIY 291
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADI +FL+L++N G EE R RDLF ALW+PD+FM RV+++ WSL CPNE PGL
Sbjct: 292 LEPWHADIMDFLELKRNSGNEELRTRDLFIALWIPDIFMTRVKNDEDWSLMCPNECPGLD 351
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ +G EFE+LYTKYE + KA+ V++A+ +W I++SQIETGTP+ML+KD CNKK+N QNL
Sbjct: 352 NVYGDEFEKLYTKYEHDNKARAVIKARTVWKSIIESQIETGTPFMLYKDACNKKNNHQNL 411
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK NLC E+IQYT+P E AVCNLASIAL R+V N F
Sbjct: 412 GTIKCGNLCAEIIQYTNPNEVAVCNLASIALNRFV--------------------INNKF 451
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL E+ I+ NLNKIID+N YP+ A SN HRPIGIGVQGLADTFILL PF+S
Sbjct: 452 DFNKLREIVKIIVRNLNKIIDINKYPLPEAEFSNKTHRPIGIGVQGLADTFILLNYPFES 511
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
+EA+ LN IFETIYY AL S E+A GPY+TY+GSP+SKGILQ D W V PSD WDW
Sbjct: 512 SEARNLNIKIFETIYYSALEASCELAKLYGPYKTYNGSPISKGILQYDFWNVVPSDLWDW 571
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I K GVRNSLLVA MPTAST+QI GNNE EPYTSNIYSRRVLSGEF +VN HL
Sbjct: 572 KLLKKKIQKYGVRNSLLVASMPTASTAQIFGNNESIEPYTSNIYSRRVLSGEFQIVNPHL 631
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L LTE LWS +KNKII + GS+Q +PE++K IYKTVWEI Q+ ++DMA DRG +
Sbjct: 632 LKTLTERKLWSNELKNKIIENGGSIQN-TNLPEDIKQIYKTVWEIPQRVILDMAADRGAF 690
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
ID SQSLNIH+ +P++ KLTS+HF+ W GLKTGMYYLR+++A++ IKFTV+ L
Sbjct: 691 IDQSQSLNIHISEPSYSKLTSMHFYGWSLGLKTGMYYLRTKSASNPIKFTVEKDKL 746
>gi|343173121|gb|AEL99263.1| ribonucleoside-diphosphate reductase subunit M1, partial [Silene
latifolia]
Length = 542
Score = 1017 bits (2629), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 474/542 (87%), Positives = 508/542 (93%)
Query: 236 KECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG 295
KECA+ISKSAGGIGVSVHNIRATGSYIRGTNG SNGI PMLRVFNDTARYVDQGGGKRKG
Sbjct: 1 KECAVISKSAGGIGVSVHNIRATGSYIRGTNGLSNGITPMLRVFNDTARYVDQGGGKRKG 60
Query: 296 AFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNE 355
AFAVYLEPWHADIF+FLDLRKNHGKEE RARDLFYALWVPDLFMERVQ++G WSLFCPNE
Sbjct: 61 AFAVYLEPWHADIFDFLDLRKNHGKEEQRARDLFYALWVPDLFMERVQTDGQWSLFCPNE 120
Query: 356 APGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKS 415
APGLADCWG EFE LYTKYE+ GKAKKVVQAQ+LWFEILK+Q+ETGTPYMLFKD+CN+KS
Sbjct: 121 APGLADCWGKEFETLYTKYERLGKAKKVVQAQSLWFEILKAQMETGTPYMLFKDSCNRKS 180
Query: 416 NQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGS 475
NQQNLGTIKSSNLCTE+IQYTSPTETAVCNLASIALPRYV+E GVP ES +KL GS S
Sbjct: 181 NQQNLGTIKSSNLCTEIIQYTSPTETAVCNLASIALPRYVKEKGVPSESQNTKLAGSLDS 240
Query: 476 KNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLG 535
NRYFDF+KLAEV +VT NLNKIIDVN+YPVETARRSN+RHRPIGIG+QGLADTFILLG
Sbjct: 241 GNRYFDFDKLAEVVEVVTTNLNKIIDVNFYPVETARRSNMRHRPIGIGIQGLADTFILLG 300
Query: 536 MPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPS 595
MPFDS EAQQLNKDIFETIYYHAL+TS ++AA+EGPYETY GSPVSKGILQPDMWGV S
Sbjct: 301 MPFDSPEAQQLNKDIFETIYYHALKTSCKLAAKEGPYETYEGSPVSKGILQPDMWGVTLS 360
Query: 596 DRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVV 655
DRWDWG LR MI++ G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVV
Sbjct: 361 DRWDWGALRGMIAEKGIRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVV 420
Query: 656 VNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAV 715
VNKHLLHDLTEMGLWSP +KN+IIY++GSVQKI +IP LKAIYKTVWEIKQKTLVDMAV
Sbjct: 421 VNKHLLHDLTEMGLWSPTLKNQIIYENGSVQKIIEIPAHLKAIYKTVWEIKQKTLVDMAV 480
Query: 716 DRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
DRGC+ID SQSLNIHMDQ N GKLTSLHFHAW +GLKTGMYYLR+RAAADAIKFTVDTS+
Sbjct: 481 DRGCFIDQSQSLNIHMDQANTGKLTSLHFHAWSKGLKTGMYYLRTRAAADAIKFTVDTSL 540
Query: 776 LK 777
LK
Sbjct: 541 LK 542
>gi|294471323|gb|ADE80908.1| RR1 [Spodoptera litura NPV]
Length = 778
Score = 1016 bits (2628), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/770 (61%), Positives = 600/770 (77%), Gaps = 21/770 (2%)
Query: 5 KRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETA 64
KRDG++E V KI R++K YGL + +P ++++V G+Y GVTT +LD L AETA
Sbjct: 4 KRDGRKEDVSVRKIKYRIEKQCYGLDMYFVNPASLTRRVVQGIYPGVTTVELDNLIAETA 63
Query: 65 AAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDII 124
A+MT +H DY+ LAAR+ VSNLHK TK F I DMY ++++G P+I D Y II
Sbjct: 64 ASMTIDHSDYSLLAARLAVSNLHKETKDLFFNVIVDMYEAIDQKTGAATPMIPDFHYGII 123
Query: 125 MKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDID 184
NA RL+S I++DRDF+YDYFGFKT++RSYL K+ G VERPQ+M+MRVA+GIH DID
Sbjct: 124 AANADRLNSAIMHDRDFNYDYFGFKTMQRSYLFKINGITVERPQYMMMRVAIGIHGRDID 183
Query: 185 SAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKS 244
+AI+TY++MS +FTHASPTLF+A TP+AQ+SSCFLV +K+DSIEGIYDTLK+CA+ISKS
Sbjct: 184 AAIETYNLMSNGYFTHASPTLFSAATPKAQMSSCFLVAIKEDSIEGIYDTLKQCAMISKS 243
Query: 245 AGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPW 304
GGIG VHN+RA GS + G +G +NG+VPMLRV+N+TARYV+QGG KR GAFAVY+EPW
Sbjct: 244 GGGIGFHVHNVRAKGSSVAGVDGAANGLVPMLRVYNNTARYVNQGGNKRPGAFAVYVEPW 303
Query: 305 HADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWG 364
HAD+F+FLDL+KN GKEE RAR+LFYALW+PDLFM RV+++ +WSL CP ++PGLADC G
Sbjct: 304 HADVFDFLDLKKNTGKEEVRARELFYALWIPDLFMRRVETDAMWSLMCPMQSPGLADCHG 363
Query: 365 TEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIK 424
EFE LY KYEK+G+ K V AQ LW I+++Q+ETGTPYML+KD+CN+KSNQ NLGTIK
Sbjct: 364 VEFEALYEKYEKQGRYVKRVSAQTLWRAIIEAQVETGTPYMLYKDSCNRKSNQSNLGTIK 423
Query: 425 SSNLCTEVIQYTSPTETAVCNLASIALPRYVR-EMGVPMESHPSKLVGSRGSKNRYFDFE 483
SNLCTE+++YTS E AVCNLASIA+ ++V + GV +DFE
Sbjct: 424 CSNLCTEIVEYTSKDEVAVCNLASIAVNKFVAPQPGV-------------------YDFE 464
Query: 484 KLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEA 543
+L E+T IVT NLN+IID N P+ A RSN R+RPIGIGVQG+AD F+ + MP++S A
Sbjct: 465 RLKEITKIVTRNLNRIIDANQCPLREAERSNQRNRPIGIGVQGMADAFVTMRMPYESDAA 524
Query: 544 QQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMW-GVNPSDRWDWGG 602
+LNK IFETIYY AL S E+AA++GPYETY GSP S+G LQ DMW G PS+ WDW
Sbjct: 525 AELNKKIFETIYYGALEASCELAAKDGPYETYKGSPASRGELQYDMWNGATPSNLWDWSL 584
Query: 603 LRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLH 662
L+ ISK G+RNSLL+APMPTAST+QILGNNE FEP+TSNIY RRVLSGEF VVN+HL+
Sbjct: 585 LKSKISKYGLRNSLLLAPMPTASTAQILGNNESFEPFTSNIYQRRVLSGEFQVVNRHLVK 644
Query: 663 DLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYID 722
DL +GLW+ +KN I+Y++GSVQ I IP E++ +YKTVWE+ +T++ MA DRG +ID
Sbjct: 645 DLAAIGLWNDTMKNLIMYNNGSVQNIESIPFEIRQLYKTVWEMSMRTMIRMAADRGAFID 704
Query: 723 HSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
SQS N++M +P++GKLTS+HF+AW GLKTGMYYLR++ A +AI+FTVD
Sbjct: 705 QSQSFNVYMAEPSYGKLTSIHFYAWNMGLKTGMYYLRTKPAVNAIQFTVD 754
>gi|114635721|ref|XP_001159888.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
isoform 2 [Pan troglodytes]
gi|397465792|ref|XP_003804665.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
isoform 2 [Pan paniscus]
Length = 695
Score = 1016 bits (2628), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/714 (66%), Positives = 577/714 (80%), Gaps = 22/714 (3%)
Query: 98 IKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLL 157
++D+YN+ N +G +P++A DI++ N RL+S IIYDRDF Y+YFGFKTLERSYLL
Sbjct: 1 MEDLYNYINPHNGKHSPMVAKSTLDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLL 60
Query: 158 KVQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSS 217
K+ GKV ERPQHMLMRV+VGIHK+DID+AI+TY+++S+RWFTHASPTLFNAGT R QLSS
Sbjct: 61 KINGKVAERPQHMLMRVSVGIHKEDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSS 120
Query: 218 CFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLR 277
CFL+ MKDDSIEGIYDTLK+CA+ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLR
Sbjct: 121 CFLLSMKDDSIEGIYDTLKQCALISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLR 180
Query: 278 VFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDL 337
V+N+TARYVDQGG KR GAFA+YLEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDL
Sbjct: 181 VYNNTARYVDQGGNKRPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDL 240
Query: 338 FMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQ 397
FM+RV++N WSL CPNE PGL + WG EFE+LY YEK+G+ +KVV+AQ LW+ I++SQ
Sbjct: 241 FMKRVETNQDWSLMCPNECPGLDEVWGEEFEKLYASYEKQGRVRKVVKAQQLWYAIIESQ 300
Query: 398 IETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVRE 457
ETGTPYML+KD+CN+KSNQQNLGTIK SNLCTE+++YTS E AVCNLAS+AL YV
Sbjct: 301 TETGTPYMLYKDSCNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-- 358
Query: 458 MGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRH 517
+ +DF+KLAEVT +V NLNKIID+NYYPV A SN RH
Sbjct: 359 -----------------TSEHTYDFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRH 401
Query: 518 RPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHG 577
RPIGIGVQGLAD FIL+ PF+S EAQ LNK IFETIYY AL S ++A +GPYETY G
Sbjct: 402 RPIGIGVQGLADAFILMRYPFESAEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEG 461
Query: 578 SPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFE 637
SPVSKGILQ DMW V P+D WDW L++ I+K G+RNSLL+APMPTAST+QILGNNE E
Sbjct: 462 SPVSKGILQYDMWNVTPTDLWDWKLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIE 521
Query: 638 PYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKA 697
PYTSNIY+RRVLSGEF +VN HLL DLTE GLW +KN+II +GS+Q IP+IP++LK
Sbjct: 522 PYTSNIYTRRVLSGEFQIVNPHLLKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQ 581
Query: 698 IYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYY 757
+YKTVWEI QKT++ MA +RG +ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYY
Sbjct: 582 LYKTVWEISQKTVLKMAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYY 641
Query: 758 LRSRAAADAIKFTVDTSVLKENPKVTDDDDA---KMAQMVCSLTNREECMACGS 808
LR+R AA+ I+FT++ LK+ KV+ +++ A MVCSL NR+EC+ CGS
Sbjct: 642 LRTRPAANPIQFTLNKEKLKDKEKVSKEEEEKERNTAAMVCSLENRDECLMCGS 695
>gi|332211481|ref|XP_003254847.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
isoform 3 [Nomascus leucogenys]
Length = 695
Score = 1016 bits (2627), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/714 (66%), Positives = 577/714 (80%), Gaps = 22/714 (3%)
Query: 98 IKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLL 157
++D+YN+ N +G +P++A DI++ N RL+S IIYDRDF Y+YFGFKTLERSYLL
Sbjct: 1 MEDLYNYINPHNGKHSPMVAKSTLDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLL 60
Query: 158 KVQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSS 217
K+ GKV ERPQHMLMRV+VGIHK+DID+AI+TY+++S+RWFTHASPTLFNAGT R QLSS
Sbjct: 61 KINGKVAERPQHMLMRVSVGIHKEDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSS 120
Query: 218 CFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLR 277
CFL+ MKDDSIEGIYDTLK+CA+ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLR
Sbjct: 121 CFLLSMKDDSIEGIYDTLKQCALISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLR 180
Query: 278 VFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDL 337
V+N+TARYVDQGG KR GAFA+YLEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDL
Sbjct: 181 VYNNTARYVDQGGNKRPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDL 240
Query: 338 FMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQ 397
FM+RV++N WSL CPNE PGL + WG EFE+LY YEK+G+ +KVV+AQ LW+ I++SQ
Sbjct: 241 FMKRVETNQDWSLMCPNECPGLDEVWGEEFEKLYASYEKQGRVRKVVKAQQLWYAIIESQ 300
Query: 398 IETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVRE 457
ETGTPYML+KD+CN+KSNQQNLGTIK SNLCTE+++YTS E AVCNLAS+AL YV
Sbjct: 301 TETGTPYMLYKDSCNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-- 358
Query: 458 MGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRH 517
+ +DF+KLAEVT +V NLNKIID+NYYPV A SN RH
Sbjct: 359 -----------------TSEHTYDFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRH 401
Query: 518 RPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHG 577
RPIGIGVQGLAD FIL+ PF+S EAQ LNK IFETIYY AL S ++A +GPYETY G
Sbjct: 402 RPIGIGVQGLADAFILMRYPFESAEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEG 461
Query: 578 SPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFE 637
SPVSKGILQ DMW V P+D WDW L++ I+K G+RNSLL+APMPTAST+QILGNNE E
Sbjct: 462 SPVSKGILQYDMWNVTPTDLWDWKLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIE 521
Query: 638 PYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKA 697
PYTSNIY+RRVLSGEF +VN HLL DLTE GLW +KN+II +GS+Q IP+IP++LK
Sbjct: 522 PYTSNIYTRRVLSGEFQIVNPHLLKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQ 581
Query: 698 IYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYY 757
+YKTVWEI QKT++ MA +RG +ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYY
Sbjct: 582 LYKTVWEISQKTVLRMAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYY 641
Query: 758 LRSRAAADAIKFTVDTSVLKENPKVTDDDDA---KMAQMVCSLTNREECMACGS 808
LR+R AA+ I+FT++ LK+ KV+ +++ A MVCSL NR+EC+ CGS
Sbjct: 642 LRTRPAANPIQFTLNKEKLKDKEKVSKEEEEKERNTAAMVCSLENRDECLMCGS 695
>gi|442761207|gb|JAA72762.1| Putative ribonucleotide reductase alpha subunit, partial [Ixodes
ricinus]
Length = 740
Score = 1015 bits (2625), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/734 (65%), Positives = 594/734 (80%), Gaps = 21/734 (2%)
Query: 39 VSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETI 98
+++KV G+Y+GVTT +LD LAAETAA MTT HPDYA LAARI VSNLHK TKKSFSE I
Sbjct: 17 IAKKVINGLYEGVTTVELDNLAAETAATMTTKHPDYALLAARIAVSNLHKETKKSFSEVI 76
Query: 99 KDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLK 158
++Y+ NE + L P+I +++Y I+M+NA +S I+YDRDF+Y+YFGFKTLER+YLL+
Sbjct: 77 SNLYHMINESNNLHTPMIDEEIYKIVMENADTFNSAIVYDRDFNYNYFGFKTLERAYLLR 136
Query: 159 VQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSC 218
+ GKVVERPQHMLMRV++GIH +D+ + ++TY++MS++WFTHASPTLFN+GTPR QLSSC
Sbjct: 137 INGKVVERPQHMLMRVSIGIHGNDLKNVLETYNLMSEKWFTHASPTLFNSGTPRPQLSSC 196
Query: 219 FLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRV 278
FL+ MK DSIEGIYDTLK+CA+ISKSAGGIG++VHNIRA GSYI G+NG S+GIVPMLRV
Sbjct: 197 FLLQMKSDSIEGIYDTLKQCALISKSAGGIGLNVHNIRAAGSYIAGSNGKSSGIVPMLRV 256
Query: 279 FNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLF 338
+N+TARYVDQGG KR GA A+YLEPWHAD+F+FLDL+KN GKEE+RARDLFYALW+PDLF
Sbjct: 257 YNNTARYVDQGGNKRPGAIAIYLEPWHADVFDFLDLKKNTGKEENRARDLFYALWIPDLF 316
Query: 339 MERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQI 398
MERV+ N WSL CPN+ PGL D +G +FE+LYTKYE E + + V AQ LW+ I++SQ
Sbjct: 317 MERVEKNETWSLMCPNDCPGLDDVYGKKFEQLYTKYESEKRYIRQVPAQKLWYAIVESQT 376
Query: 399 ETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREM 458
ETGTPYML+KD CN+KSNQ+N+GTIK SNLCTE+++YTS E AVCNLASIAL R+VR
Sbjct: 377 ETGTPYMLYKDACNEKSNQKNIGTIKCSNLCTEIVEYTSDKEVAVCNLASIALNRFVR-- 434
Query: 459 GVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHR 518
N +FDFE+L V+ I+T NLN+II+ N+YP+ A+ SN+RHR
Sbjct: 435 ------------------NGHFDFEQLRRVSRIITVNLNRIIERNFYPIPEAKLSNMRHR 476
Query: 519 PIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGS 578
PIGIGVQGLADTFILL +PFDS EA+ LN+ IFETIYY AL S E+A GPYETY GS
Sbjct: 477 PIGIGVQGLADTFILLRLPFDSEEARLLNRQIFETIYYGALEQSCELAKNLGPYETYPGS 536
Query: 579 PVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
PVSKG+LQ DM P++ WDW L+ I K GVRNSLLVAPMPTAST+QILGNNE EP
Sbjct: 537 PVSKGLLQYDMXXXKPTEMWDWTSLKKQIVKYGVRNSLLVAPMPTASTAQILGNNESIEP 596
Query: 639 YTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAI 698
YT+N+Y+RRVLSGEF VVN HLL DLT+ GLW+ +KN +I + GSVQK+ IP++LK +
Sbjct: 597 YTTNVYTRRVLSGEFQVVNYHLLKDLTDRGLWNDELKNALIANHGSVQKL-NIPDDLKHL 655
Query: 699 YKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYL 758
Y+TVWEI QK +++MA DRG +ID SQSLNIH+ QP + K+TS+HF W GLKTGMYYL
Sbjct: 656 YRTVWEIPQKHILEMAADRGAFIDQSQSLNIHIAQPTYSKITSMHFFGWKLGLKTGMYYL 715
Query: 759 RSRAAADAIKFTVD 772
R++ AA+AI+FTVD
Sbjct: 716 RTKPAANAIQFTVD 729
>gi|194382560|dbj|BAG64450.1| unnamed protein product [Homo sapiens]
Length = 695
Score = 1014 bits (2623), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/714 (66%), Positives = 576/714 (80%), Gaps = 22/714 (3%)
Query: 98 IKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLL 157
++D+YN+ N +G +P++A DI++ N RL+S IIYDRDF Y+YFGFKTLERSYLL
Sbjct: 1 MEDLYNYINPHNGKHSPMVAKSTLDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLL 60
Query: 158 KVQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSS 217
K+ GKV ERPQHMLMRV+VGIHK+DID+AI+TY+++S+RWFTHASPTLFNAGT R QLSS
Sbjct: 61 KINGKVAERPQHMLMRVSVGIHKEDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSS 120
Query: 218 CFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLR 277
CFL+ MKDDSIEGIYDTLK+CA+ISKSAGGIGV+V IRATGSYI GTNG NG+VPMLR
Sbjct: 121 CFLLSMKDDSIEGIYDTLKQCALISKSAGGIGVAVSCIRATGSYIAGTNGNPNGLVPMLR 180
Query: 278 VFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDL 337
V+N+TARYVDQGG KR GAFA+YLEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDL
Sbjct: 181 VYNNTARYVDQGGNKRPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDL 240
Query: 338 FMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQ 397
FM+RV++N WSL CPNE PGL + WG EFE+LY YEK+G+ +KVV+AQ LW+ I++SQ
Sbjct: 241 FMKRVETNQDWSLMCPNECPGLDEVWGEEFEKLYASYEKQGRVRKVVKAQQLWYAIIESQ 300
Query: 398 IETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVRE 457
ETGTPYML+KD+CN+KSNQQNLGTIK SNLCTE+++YTS E AVCNLAS+AL YV
Sbjct: 301 TETGTPYMLYKDSCNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-- 358
Query: 458 MGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRH 517
+ +DF+KLAEVT +V NLNKIID+NYYPV A SN RH
Sbjct: 359 -----------------TSEHTYDFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRH 401
Query: 518 RPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHG 577
RPIGIGVQGLAD FIL+ PF+S EAQ LNK IFETIYY AL S ++A +GPYETY G
Sbjct: 402 RPIGIGVQGLADAFILMRYPFESAEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEG 461
Query: 578 SPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFE 637
SPVSKGILQ DMW V P+D WDW L++ I+K G+RNSLL+APMPTAST+QILGNNE E
Sbjct: 462 SPVSKGILQYDMWNVTPTDLWDWKVLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIE 521
Query: 638 PYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKA 697
PYTSNIY+RRVLSGEF +VN HLL DLTE GLW +KN+II +GS+Q IP+IP++LK
Sbjct: 522 PYTSNIYTRRVLSGEFQIVNPHLLKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQ 581
Query: 698 IYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYY 757
+YKTVWEI QKT++ MA +RG +ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYY
Sbjct: 582 LYKTVWEISQKTVLKMAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYY 641
Query: 758 LRSRAAADAIKFTVDTSVLKENPKVTDDDDA---KMAQMVCSLTNREECMACGS 808
LR+R AA+ I+FT++ LK+ KV+ +++ A MVCSL NR+EC+ CGS
Sbjct: 642 LRTRPAANPIQFTLNKEKLKDKEKVSKEEEEKERNTAAMVCSLENRDECLMCGS 695
>gi|1710392|sp|P50647.1|RIR1_PLAFG RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleotide reductase R1 subunit
gi|349792|gb|AAA29755.1| ribonucleotide reductase large subunit [Plasmodium falciparum]
Length = 804
Score = 1012 bits (2617), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 488/823 (59%), Positives = 614/823 (74%), Gaps = 38/823 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+ R G++E + FD+I R+++LSYGL P V+Q V G+Y + T +LDELA
Sbjct: 1 MYVLNRKGEEEDISFDQILKRIQRLSYGLHKLGEYPACVTQGVINGMYSSIKTCELDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
A+T A M T HPD++ LAARI NLHKNT +E + +Y Y + G A LI+ +V
Sbjct: 61 AQTCAYMATTHPDFSILAARITTDNLHKNTSDDVAEVAEALYT-YKDGRGRPASLISKEV 119
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YD I+ + RL+ EI Y F+YDYFGFKTLERSYLL++ K++ERPQH+LMRV++GIH
Sbjct: 120 YDFILLHKVRLNKEIDYTTHFNYDYFGFKTLERSYLLRINNKIIERPQHLLMRVSIGIHI 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDID A++TYH+MSQ++FTHA+PTLFN+GTPR Q+SSCFL+ MK DSIEGI++TLK+CA+
Sbjct: 180 DDIDKALETYHLMSQKYFTHATPTLFNSGTPRPQMSSCFLLSMKADSIEGIFETLKQCAL 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIGV+V +IR SYIRGTNG SNG+VPMLRVFNDTARYVDQGGGKRKG++AVY
Sbjct: 240 ISKTAGGIGVAVQDIRGQNSYIRGTNGISNGLVPMLRVFNDTARYVDQGGGKRKGSYAVY 299
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWH+DIFEFLDLRKNHGKEE RARDLFYA+WVPDLFM+RV+ N W+L CPNE PGL+
Sbjct: 300 IEPWHSDIFEFLDLRKNHGKEELRARDLFYAVWVPDLFMKRVKENKNWTLMCPNECPGLS 359
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE+LYTKYE+E KK V AQ+LWF IL+SQIETG P L+KD+CN K +NL
Sbjct: 360 ETWGEEFEKLYTKYEEENMGKKTVLAQDLWFAILQSQIETGVPIYLYKDSCNAKP-IKNL 418
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLC E+I+YTSP E AVCNLASIAL ++V + + F
Sbjct: 419 GTIKCSNLCCEIIEYTSPDEVAVCNLASIALCKFV------------------DLEKKEF 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+F+KL E+T I+T NL+KII+ NYYPV+ A+ SN RHRPIGIGVQGLADTF+LL ++S
Sbjct: 461 NFKKLYEITKIITRNLDKIIERNYYPVKEAKTSNTRHRPIGIGVQGLADTFMLLRYLYES 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDR-WD 599
A++LNK I+ET+YY AL S + + GPYE+Y GSP S+GILQ DMW ++ WD
Sbjct: 521 DAAKELNKRIYETMYYAALEMSVD-WLQSGPYESYQGSPGSQGILQFDMWNAKVDNKYWD 579
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L+ I+K G+RN LL+APMPTASTSQILGNNE FEPYTSNIY RRVLSGEF VVN H
Sbjct: 580 WDELKLKIAKTGLRNLLLLAPMPTASTSQILGNNESFEPYTSNIYYRRVLSGEFFVVNPH 639
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL DL + GLW +K ++I +GS+Q I +IP++LK +YKTVWEIKQK ++DMA DRG
Sbjct: 640 LLKDLFDRGLWDEDMKQQLIAHNGSIQYISEIPDDLKELYKTVWEIKQKNIIDMAADRGY 699
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN 779
+ID SQSLNI++ +P F KL+S+HF+ W +GLKTG YYLR++AA DAIKFTVDT V K
Sbjct: 700 FIDQSQSLNIYIQKPTFAKLSSMHFYGWEKGLKTGAYYLRTQAATDAIKFTVDTHVAKNA 759
Query: 780 PKVTDDDDAKMAQMVCSLT----------------NREECMAC 806
K+ + D ++ + V T N E+C+ C
Sbjct: 760 VKLKNADGVQITREVSRETIQLNQRYSKCVSFKSNNDEQCLMC 802
>gi|403262128|ref|XP_003923447.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
isoform 2 [Saimiri boliviensis boliviensis]
Length = 695
Score = 1010 bits (2611), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/714 (66%), Positives = 575/714 (80%), Gaps = 22/714 (3%)
Query: 98 IKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLL 157
++D+YN+ N +G +P++A DI++ N RL+S IIYDRDF Y+YFGFKTLERSYLL
Sbjct: 1 MEDLYNYINPHNGKHSPMVAKSTLDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLL 60
Query: 158 KVQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSS 217
K+ GKV ERPQHMLMRV+VGIHK+DID+AI+TY+++S+RWFTHASPTLFNAGT R QLSS
Sbjct: 61 KINGKVAERPQHMLMRVSVGIHKEDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSS 120
Query: 218 CFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLR 277
CFL+ MKDDSIEGIYDTLK+CA+ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLR
Sbjct: 121 CFLLSMKDDSIEGIYDTLKQCALISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLR 180
Query: 278 VFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDL 337
V+N+TARYVDQGG KR GAFA+YLEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDL
Sbjct: 181 VYNNTARYVDQGGNKRPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDL 240
Query: 338 FMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQ 397
FM+RV++N WSL CPNE PGL + WG EFE+LY YEK+ + +KVV+AQ LW+ I++SQ
Sbjct: 241 FMKRVETNQDWSLMCPNECPGLDEVWGEEFEKLYESYEKQRRVRKVVKAQQLWYAIIESQ 300
Query: 398 IETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVRE 457
ETGTPYML+KD+CN+KSNQQNLGTIK SNLCTE+++YTS E AVCNLAS+AL YV
Sbjct: 301 TETGTPYMLYKDSCNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV-- 358
Query: 458 MGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRH 517
+ +DF+KLAEVT ++ NLNKIID+NYYPV A SN RH
Sbjct: 359 -----------------TSEHTYDFQKLAEVTKVIVRNLNKIIDINYYPVPEACLSNKRH 401
Query: 518 RPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHG 577
RPIGIGVQGLAD FIL+ PF+S EAQ LNK IFETIYY AL S ++A GPYETY G
Sbjct: 402 RPIGIGVQGLADAFILMRYPFESAEAQLLNKQIFETIYYGALEASCDLAKEHGPYETYEG 461
Query: 578 SPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFE 637
SPVSKGILQ DMW V P+D WDW L++ I+K G+RNSLL+APMPTAST+QILGNNE E
Sbjct: 462 SPVSKGILQYDMWNVTPTDLWDWKLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIE 521
Query: 638 PYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKA 697
PYTSNIY+RRVLSGEF +VN HLL DLTE GLW +KN+II +GS+Q IP+IP++LK
Sbjct: 522 PYTSNIYTRRVLSGEFQIVNPHLLKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQ 581
Query: 698 IYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYY 757
+YKTVWEI QKT++ MA +RG +ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYY
Sbjct: 582 LYKTVWEISQKTVLKMAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYY 641
Query: 758 LRSRAAADAIKFTVDTSVLKENPKVTDDDDA---KMAQMVCSLTNREECMACGS 808
LR+R AA+ I+FT++ +K+ K++ +++ A MVCSL NR+EC+ CGS
Sbjct: 642 LRTRPAANPIQFTLNKEKIKDKEKISKEEEEKERNTAAMVCSLENRDECLMCGS 695
>gi|340504856|gb|EGR31263.1| ribonucleoside-diphosphate large, putative [Ichthyophthirius
multifiliis]
Length = 804
Score = 1009 bits (2609), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/743 (62%), Positives = 592/743 (79%), Gaps = 18/743 (2%)
Query: 38 LVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSET 97
L+ QKV G+Y+GV T+ LDEL+AET A M HP Y+ LAARI VSNLHK TK++F ET
Sbjct: 3 LIIQKVVKGMYQGVHTTTLDELSAETCAYMNIIHPHYSLLAARIAVSNLHKETKETFVET 62
Query: 98 IKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLL 157
I+D+YN Y + KA LIADDVY I+++NA + +I Y+RD+ YD+FGFKTLERSYLL
Sbjct: 63 IQDLYN-YKDNQNRKASLIADDVYQIVIENADLIQQQINYERDYTYDFFGFKTLERSYLL 121
Query: 158 KVQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSS 217
K+ GK+VERPQ MLMRV++GIHK D+ SA +TY++MS++WFTHA+PTLFNAG+P Q+SS
Sbjct: 122 KIHGKIVERPQTMLMRVSIGIHKRDLQSAFRTYNLMSEKWFTHATPTLFNAGSPNPQMSS 181
Query: 218 CFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLR 277
CFL+ M+ DSIEGIYDTLK+CA+ISKSAGGIGVSVHNIR+ SYIRGTNG SNGI+PML+
Sbjct: 182 CFLLTMQSDSIEGIYDTLKQCALISKSAGGIGVSVHNIRSQDSYIRGTNGHSNGIIPMLK 241
Query: 278 VFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDL 337
VFNDTARYVDQGGGKRKG+FA+YLEPWHAD+F+FL L+KNHGKEE RARDLFYALW+PD+
Sbjct: 242 VFNDTARYVDQGGGKRKGSFAIYLEPWHADVFDFLQLKKNHGKEEQRARDLFYALWIPDI 301
Query: 338 FMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQ 397
FM RV ++ W+L CPNE GL D WG EFE+LY KYE+EGK +K ++A+ LW +I+ SQ
Sbjct: 302 FMRRVIADEHWTLMCPNECLGLPDVWGEEFEKLYEKYEREGKGRKRIKARELWQDIIDSQ 361
Query: 398 IETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVRE 457
IETGTPYML+KD CN+KSNQQNLGTI+SSNLCTE+I+YTSP E AVCNLASI+L ++V E
Sbjct: 362 IETGTPYMLYKDACNRKSNQQNLGTIRSSNLCTEIIEYTSPDEIAVCNLASISLQKFVVE 421
Query: 458 MGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRH 517
++N YF++ KL E++ IVT NLN++ID NYYPV AR SN++H
Sbjct: 422 ----------------DNENSYFEYNKLYEISKIVTFNLNRVIDENYYPVPQARLSNMKH 465
Query: 518 RPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHG 577
RPIGIGVQGLAD F+ L + F+S +A ++N+ IFETIYY A S E+A ++G Y ++ G
Sbjct: 466 RPIGIGVQGLADAFMKLKVSFESEKALEINEKIFETIYYGACEASMELAIKDGCYASFVG 525
Query: 578 SPVSKGILQPDMWGVNPSD-RWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
SP S+G LQ D+W P +DW L+ I K G+RNSLL+APMPTASTSQILGN E F
Sbjct: 526 SPASQGKLQFDLWNYKPHKCGYDWDSLKSKIQKYGMRNSLLIAPMPTASTSQILGNCESF 585
Query: 637 EPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELK 696
EPYTSN+Y+RRVL+GEFV VN HL+ DL ++ W+P +KN+++ +GSVQ+I +IPE LK
Sbjct: 586 EPYTSNLYTRRVLAGEFVCVNPHLVQDLIKINQWTPSVKNQLLAYNGSVQQIQEIPESLK 645
Query: 697 AIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMY 756
IYKTVWE+ QK ++++A+ R +ID SQSLNIH+ +P++ K+TS+HF+AW +GLKTGMY
Sbjct: 646 DIYKTVWEVSQKAIINLALSRSPFIDQSQSLNIHISEPSYSKMTSMHFYAWEKGLKTGMY 705
Query: 757 YLRSRAAADAIKFTVDTSVLKEN 779
YLRSR AAD IKFT+D L +N
Sbjct: 706 YLRSRPAADPIKFTLDVESLLKN 728
>gi|294471336|gb|ADE80919.1| RR1 [Spodoptera litura NPV]
Length = 778
Score = 1009 bits (2608), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/770 (60%), Positives = 598/770 (77%), Gaps = 21/770 (2%)
Query: 5 KRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETA 64
KRDG++E V KI R++K YGL + +P ++++V G+Y GVTT +LD L AETA
Sbjct: 4 KRDGRKEDVSVRKIKYRIEKQCYGLDMYFVNPASLTRRVVQGIYPGVTTVELDNLIAETA 63
Query: 65 AAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDII 124
A+MT +H DY+ LAAR+ VSNLH TK F I DMY ++++G P+I+D Y II
Sbjct: 64 ASMTIDHSDYSLLAARLAVSNLHNETKDLFFNVIVDMYEAIDQKTGAATPMISDFHYGII 123
Query: 125 MKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDID 184
NA RL+S I++DRDF+YDYFGFKT++RSYL K+ G VERPQ+M+MRVA+GIH DID
Sbjct: 124 AANADRLNSAIMHDRDFNYDYFGFKTMQRSYLFKINGITVERPQYMMMRVAIGIHGRDID 183
Query: 185 SAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKS 244
+AI+TY++MS +FTHASPTLF+A TP+AQ+SSCFLV +K+DSIEGIYDTLK+CA+ISKS
Sbjct: 184 AAIETYNLMSNGYFTHASPTLFSAATPKAQMSSCFLVAIKEDSIEGIYDTLKQCAMISKS 243
Query: 245 AGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPW 304
GGIG VHN+RA GS + G +G +NG+VPMLRV+N+TARYV+QGG KR GAFAVY+EPW
Sbjct: 244 GGGIGFHVHNVRAKGSSVAGVDGAANGLVPMLRVYNNTARYVNQGGNKRPGAFAVYVEPW 303
Query: 305 HADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWG 364
HAD+ +FLDL+KN GKEE RAR+LFYALW+PDLFM RV+++ +WSL CP ++PGLADC G
Sbjct: 304 HADVSDFLDLKKNTGKEEVRARELFYALWIPDLFMRRVETDAMWSLMCPMQSPGLADCHG 363
Query: 365 TEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIK 424
EFE LY KYEK+G+ K V AQ LW I+++Q+ETGTPYML+KD+CN+KSNQ NLGTIK
Sbjct: 364 VEFEALYEKYEKQGRYVKRVSAQTLWRAIIEAQVETGTPYMLYKDSCNRKSNQSNLGTIK 423
Query: 425 SSNLCTEVIQYTSPTETAVCNLASIALPRYVR-EMGVPMESHPSKLVGSRGSKNRYFDFE 483
SNLCTE+++YTS E AVCNLASIA+ ++V + GV +DFE
Sbjct: 424 CSNLCTEIVEYTSKDEVAVCNLASIAVNKFVAPQPGV-------------------YDFE 464
Query: 484 KLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEA 543
+L E+T IVT NLN+IID N P+ A RSN R+RPIGIGVQG+AD F+ + MP++S A
Sbjct: 465 RLKEITKIVTRNLNRIIDANQCPLREAERSNQRNRPIGIGVQGMADAFVTMRMPYESDAA 524
Query: 544 QQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMW-GVNPSDRWDWGG 602
+LNK IFETIYY AL S E+AA++GPYETY GS S+G LQ DMW G PS+ WDW
Sbjct: 525 AELNKKIFETIYYGALEASCELAAKDGPYETYKGSRASRGELQYDMWNGATPSNLWDWSL 584
Query: 603 LRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLH 662
L+ ISK G+RNSLL+APMPTAST+QILGNNE FEP+TSNIY RRVLSGEF VVN+HL+
Sbjct: 585 LKSKISKYGLRNSLLLAPMPTASTAQILGNNESFEPFTSNIYQRRVLSGEFQVVNRHLVK 644
Query: 663 DLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYID 722
DL +GLW+ +KN I+Y++GSVQ I IP E++ +YKTVWE+ +T++ MA DRG +ID
Sbjct: 645 DLAAIGLWNDTMKNLIMYNNGSVQNIESIPFEIRQLYKTVWEMSMRTMIRMAADRGAFID 704
Query: 723 HSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
SQS N++M +P++GKLTS+HF+AW GLKTGMYYLR++ A +AI+FTVD
Sbjct: 705 QSQSFNVYMAEPSYGKLTSIHFYAWKMGLKTGMYYLRTKPAVNAIQFTVD 754
>gi|18266787|sp|O61065.2|RIR1_CRYPV RecName: Full=Ribonucleoside-diphosphate reductase large chain;
AltName: Full=Ribonucleotide reductase R1 subunit
gi|8365757|gb|AAC12280.2| ribonucleotide reductase R1 subunit [Cryptosporidium parvum]
gi|32398776|emb|CAD98486.1| ribonucleoside-diphosphate reductase large chain [Cryptosporidium
parvum]
Length = 803
Score = 1007 bits (2604), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/821 (59%), Positives = 617/821 (75%), Gaps = 35/821 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVV R G++E V FD+I +R+ KLSYGL DP V+Q V G+Y G+ TS+LDELA
Sbjct: 1 MYVVNRKGEEEPVSFDQILSRITKLSYGLH-PLVDPARVTQAVINGLYSGIKTSELDELA 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
++T A M H D++ LAARI SNLHKNT + +YN + + G APLI+ V
Sbjct: 60 SQTCAYMAATHNDFSKLAARISTSNLHKNTSSDIGDVASQLYN-FKDNQGCPAPLISKPV 118
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YD IM+N R++S+I + +DF+YDYF FKTLERSYLLK+ KVVERPQH+LMRV+ GIH
Sbjct: 119 YDFIMENRERINSKIDFSKDFEYDYFAFKTLERSYLLKIDNKVVERPQHLLMRVSCGIHC 178
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI++A++TY ++SQ++FTHA+PTLFN+GTPR Q+SSCFL+ + +DSI GI+DTL +CA
Sbjct: 179 GDIEAALETYELLSQKYFTHATPTLFNSGTPRPQMSSCFLLRIPEDSINGIFDTLTKCAN 238
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGG+GV+V NIR TGSYIRGTNG SNG++PMLRV+NDTARY+DQGGGKRKGA A+Y
Sbjct: 239 ISKTAGGLGVAVSNIRGTGSYIRGTNGRSNGLIPMLRVYNDTARYIDQGGGKRKGAIAIY 298
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH D+ EF+++RKNHGKEE R RDLF ALWVPDLFMERV+ + W+L CP+E GL
Sbjct: 299 LEPWHVDVVEFIEIRKNHGKEEMRCRDLFPALWVPDLFMERVEKDQDWTLMCPDECRGLQ 358
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG +F++LY +YEK+G+ +K ++AQ LWF IL++QIETGTP++ +KD N KSNQ+NL
Sbjct: 359 DVWGDDFKKLYEEYEKQGRGRKTMKAQKLWFLILQAQIETGTPFICYKDAANSKSNQKNL 418
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI SSNLCTE+I+YTS E AVCNLASI LP++V + N+ F
Sbjct: 419 GTIVSSNLCTEIIEYTSTDEVAVCNLASIGLPKFVDK------------------NNKTF 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EVT ++T NLNK+IDV YY ++ ++SNLRHRP+GIG+QGLAD F++L MP++S
Sbjct: 461 DFDKLKEVTKVITRNLNKLIDVGYYSLKECKKSNLRHRPLGIGIQGLADCFMMLRMPYES 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP-SDRWD 599
A++LNK IFE IYY AL S E+A + GPYETY GSP SKGILQ DMWGV P S D
Sbjct: 521 EGAKKLNKQIFEVIYYAALDASCELAEKYGPYETYSGSPASKGILQFDMWGVTPDSGLCD 580
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L+D ISK+G+RNSLL++PMPTASTSQILGNNE FEP+TSNIY RRVLSGEF VVN H
Sbjct: 581 WDLLKDRISKHGIRNSLLISPMPTASTSQILGNNESFEPFTSNIYHRRVLSGEFFVVNPH 640
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL+DL E+GLW +K II ++GS+Q I IPE+++ +YKTVWEIKQKT++DMA DRG
Sbjct: 641 LLNDLLELGLWDDRLKQNIIANNGSIQNILTIPEDIRELYKTVWEIKQKTVIDMAADRGP 700
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN 779
Y+ SQSLNIHM+ NF KL+S+HF+ W +GLKTG+YYLR+++A I+FTVD +LK
Sbjct: 701 YVCQSQSLNIHMENANFAKLSSMHFYGWKKGLKTGIYYLRTQSATRPIQFTVDQQLLKSE 760
Query: 780 PKVTDDDDAKMAQ---------MVCSL-----TNREECMAC 806
K D + Q + C L + EECM C
Sbjct: 761 TKEKDSLETNKRQALEPEAQKLIACPLRPTNMKDDEECMMC 801
>gi|307196361|gb|EFN77956.1| Ribonucleoside-diphosphate reductase large subunit [Harpegnathos
saltator]
Length = 849
Score = 1007 bits (2604), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 494/836 (59%), Positives = 618/836 (73%), Gaps = 46/836 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+G++E VHFDKIT+R+ K Y L++ + DP V+ +V G+Y GVTT +LD LA
Sbjct: 32 MHVIKRNGRKEDVHFDKITSRIAKQCYSLNMNYVDPSAVAIQVIRGLYSGVTTVELDNLA 91
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA M T HPDYA LAARI VSNLHK TKKSFSE + D++ + + P+I++
Sbjct: 92 AETAATMATQHPDYAILAARIDVSNLHKETKKSFSEVMHDLHYARDPITNEPNPVISEHY 151
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+II +NA RLDS IIYDRDF+Y+Y GFKTLERSYLLK+ GK+VERPQHMLMRVAVGIH+
Sbjct: 152 YNIIKRNAERLDSAIIYDRDFNYNYMGFKTLERSYLLKINGKIVERPQHMLMRVAVGIHE 211
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDI+ I+TY +S+R+FTHASPTLFNA T Q+SSCFL+ + DDSI+GIY TLK+CA+
Sbjct: 212 DDINKVIETYDYLSERYFTHASPTLFNACTKNQQMSSCFLLTLNDDSIKGIYGTLKKCAL 271
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG++VH IRA + +NG++ +L+++ND A YVDQGG KR GAFAVY
Sbjct: 272 ISKYAGGIGINVHCIRAKDTDDTYDTDATNGLISVLKLYNDIAIYVDQGGNKRPGAFAVY 331
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+FL+L++N G RARDLFYALWVPDLFMERV + +WSL CP E+PGLA
Sbjct: 332 LEPWHADIFDFLELKRNIGDGNLRARDLFYALWVPDLFMERVFDDEVWSLMCPYESPGLA 391
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG EF LYT+YEKEG+ K+ VQA+++W IL+SQ+ETGTPYML+KD CN+KSN Q+L
Sbjct: 392 DVWGDEFNELYTRYEKEGRYKRQVQARDVWVTILRSQVETGTPYMLYKDHCNRKSNHQHL 451
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++Y+SP E AVCNLASIAL +V + + F
Sbjct: 452 GTIKCSNLCTEIVEYSSPEEVAVCNLASIALNMFV------------------NTNKKTF 493
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL V IVT NL+K+IDVN+YP+ +RSN RHRPIGIGVQGLAD F+L+ PF+S
Sbjct: 494 DFDKLKTVVKIVTRNLDKVIDVNFYPIPETKRSNRRHRPIGIGVQGLADAFLLMRYPFES 553
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LN IFET+YY AL S E+AA +G YETY GSPVSKGILQ DMW V P+D WDW
Sbjct: 554 KEAKELNIKIFETLYYGALEASCELAAEKGTYETYEGSPVSKGILQYDMWNVKPTDLWDW 613
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+K+GVRNSLL+APMPTAST+QILGNNE E YTSNIY RRVLSGEFV++N HL
Sbjct: 614 DELKTKIAKHGVRNSLLIAPMPTASTAQILGNNESIEAYTSNIYVRRVLSGEFVIINPHL 673
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLT GLW ++N+I+ + GSVQ I +IP++LK +YKTVWEI QK +++MA DRG +
Sbjct: 674 LRDLTVRGLWGKDMQNEILANFGSVQNIERIPDDLKELYKTVWEISQKVILEMAADRGAF 733
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK--- 777
ID SQSLNIH+ P+ KLTS+HF W GLKTGMYYLR++ AA+ I+FTVD S L+
Sbjct: 734 IDQSQSLNIHIADPSTEKLTSMHFFGWRSGLKTGMYYLRTKPAANPIQFTVDKSKLQSRD 793
Query: 778 ---------ENPKVTDDDDAK----------------MAQMVCSLTNREECMACGS 808
+P + D DA A + C+ N++ CMAC S
Sbjct: 794 SLSSSTSDISSPIKSPDKDADNSEKRNLINQQANKNLEAMLACARENKDACMACSS 849
>gi|66475480|ref|XP_627556.1| ribonucleotide-diphosphate reductase large chain; RIR1; c-terminal
PFL-like glycyl radical enzymes-like fold
[Cryptosporidium parvum Iowa II]
gi|46229284|gb|EAK90133.1| ribonucleotide-diphosphate reductase large chain; RIR1; c-terminal
PFL-like glycyl radical enzymes-like fold
[Cryptosporidium parvum Iowa II]
Length = 804
Score = 1006 bits (2602), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 485/821 (59%), Positives = 617/821 (75%), Gaps = 35/821 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVV R G++E V FD+I +R+ KLSYGL DP V+Q V G+Y G+ TS+LDELA
Sbjct: 2 MYVVNRKGEEEPVSFDQILSRITKLSYGLH-PLVDPARVTQAVINGLYSGIKTSELDELA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
++T A M H D++ LAARI SNLHKNT + +YN + + G APLI+ V
Sbjct: 61 SQTCAYMAATHNDFSKLAARISTSNLHKNTSSDIGDVASQLYN-FKDNQGCPAPLISKPV 119
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YD IM+N R++S+I + +DF+YDYF FKTLERSYLLK+ KVVERPQH+LMRV+ GIH
Sbjct: 120 YDFIMENRERINSKIDFSKDFEYDYFAFKTLERSYLLKIDNKVVERPQHLLMRVSCGIHC 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI++A++TY ++SQ++FTHA+PTLFN+GTPR Q+SSCFL+ + +DSI GI+DTL +CA
Sbjct: 180 GDIEAALETYELLSQKYFTHATPTLFNSGTPRPQMSSCFLLRIPEDSINGIFDTLTKCAN 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGG+GV+V NIR TGSYIRGTNG SNG++PMLRV+NDTARY+DQGGGKRKGA A+Y
Sbjct: 240 ISKTAGGLGVAVSNIRGTGSYIRGTNGRSNGLIPMLRVYNDTARYIDQGGGKRKGAIAIY 299
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH D+ EF+++RKNHGKEE R RDLF ALWVPDLFMERV+ + W+L CP+E GL
Sbjct: 300 LEPWHVDVVEFIEIRKNHGKEEMRCRDLFPALWVPDLFMERVEKDQDWTLMCPDECRGLQ 359
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG +F++LY +YEK+G+ +K ++AQ LWF IL++QIETGTP++ +KD N KSNQ+NL
Sbjct: 360 DVWGDDFKKLYEEYEKQGRGRKTMKAQKLWFLILQAQIETGTPFICYKDAANSKSNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI SSNLCTE+I+YTS E AVCNLASI LP++V + N+ F
Sbjct: 420 GTIVSSNLCTEIIEYTSTDEVAVCNLASIGLPKFVDK------------------NNKTF 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EVT ++T NLNK+IDV YY ++ ++SNLRHRP+GIG+QGLAD F++L MP++S
Sbjct: 462 DFDKLKEVTKVITRNLNKLIDVGYYSLKECKKSNLRHRPLGIGIQGLADCFMMLRMPYES 521
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP-SDRWD 599
A++LNK IFE IYY AL S E+A + GPYETY GSP SKGILQ DMWGV P S D
Sbjct: 522 EGAKKLNKQIFEVIYYAALDASCELAEKYGPYETYSGSPASKGILQFDMWGVTPDSGLCD 581
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L+D ISK+G+RNSLL++PMPTASTSQILGNNE FEP+TSNIY RRVLSGEF VVN H
Sbjct: 582 WDLLKDRISKHGIRNSLLISPMPTASTSQILGNNESFEPFTSNIYHRRVLSGEFFVVNPH 641
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL+DL E+GLW +K II ++GS+Q I IPE+++ +YKTVWEIKQKT++DMA DRG
Sbjct: 642 LLNDLLELGLWDDRLKQNIIANNGSIQNILTIPEDIRELYKTVWEIKQKTVIDMAADRGP 701
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN 779
Y+ SQSLNIHM+ NF KL+S+HF+ W +GLKTG+YYLR+++A I+FTVD +LK
Sbjct: 702 YVCQSQSLNIHMENANFAKLSSMHFYGWKKGLKTGIYYLRTQSATRPIQFTVDQQLLKSE 761
Query: 780 PKVTDDDDAKMAQ---------MVCSL-----TNREECMAC 806
K D + Q + C L + EECM C
Sbjct: 762 TKEKDSLETNKRQALEPEAQKLIACPLRPTNMKDDEECMMC 802
>gi|399218487|emb|CCF75374.1| unnamed protein product [Babesia microti strain RI]
Length = 813
Score = 1006 bits (2601), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 477/786 (60%), Positives = 600/786 (76%), Gaps = 30/786 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+VV R G+ E V FD+I R++KL YGL DP V++ V G+Y G+ TSQLDELA
Sbjct: 1 MFVVNRKGEDEPVSFDQILHRIQKLCYGLH-PIVDPPRVTKNVINGMYSGIPTSQLDELA 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
A+T A M NHPD++ LAARI++ NLHKNT + E++ ++ ++ + +G +PL+ D V
Sbjct: 60 AQTCAYMAANHPDFSKLAARIIIDNLHKNTFDNI-ESVANLLYNFKDSNGNHSPLLNDKV 118
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y I+++ R++ EI YD DF YDYFGFKTLERSYLL+V GK+ ERPQH+L+RVA GIH
Sbjct: 119 YKFIIQHKDRINKEIDYDMDFQYDYFGFKTLERSYLLRVNGKIAERPQHLLVRVACGIHS 178
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID A++TY+ MS++ F HA+PTLFN+GT Q+SSCFL+ +KDDSI GI+DTL +CA+
Sbjct: 179 NDIDRAMETYNYMSKKLFIHATPTLFNSGTKFPQMSSCFLLDIKDDSISGIFDTLTQCAL 238
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+++H IRA+ SYIRGTNG SNGI+PMLR+FNDTARYVDQGGGKRKG+FA+Y
Sbjct: 239 ISKTAGGIGLAIHKIRASSSYIRGTNGHSNGIIPMLRIFNDTARYVDQGGGKRKGSFAIY 298
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIFEFLDLRKNHG EE RARDLFYALW+PDLFM+RV++N W+L CP+E GL
Sbjct: 299 LEPWHADIFEFLDLRKNHGSEESRARDLFYALWIPDLFMKRVEANENWTLMCPDECRGLD 358
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
WG EFE+LYT YE +G +K V AQ LWF IL+SQIETGTPYML+KD CN KSNQ+N+
Sbjct: 359 QVWGEEFEKLYTSYESKGMGRKTVPAQTLWFAILQSQIETGTPYMLYKDACNYKSNQKNI 418
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLC E++QYTSP E AVCNLAS+ALP+YV +K F
Sbjct: 419 GTIKSSNLCCEIVQYTSPNEVAVCNLASLALPKYV------------------NTKTLEF 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+ L I+T NLN+IID NYYPV A SN RHRPIG+GVQGLADTF+L+ PF+S
Sbjct: 461 DFKLLHSACKILTFNLNRIIDENYYPVPEAEYSNKRHRPIGVGVQGLADTFMLMRYPFES 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDR-WD 599
EA++LN IFETIY+ L S E+A + GPYET+ GSP S+G+LQ D+W D ++
Sbjct: 521 QEARELNVRIFETIYHGCLEESVELAKKYGPYETFEGSPASQGLLQFDLWNRKVDDNFYN 580
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQIL---------GNNECFEPYTSNIYSRRVLS 650
W ++ I K G+RNSLLVAPMPTASTSQIL GN+E FEPYT NIY RRVLS
Sbjct: 581 WTEMKKDIMKYGLRNSLLVAPMPTASTSQILVLTYYPNYIGNSESFEPYTCNIYYRRVLS 640
Query: 651 GEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTL 710
GEF VVN HLL+DL ++ LW+ +K K+I +GS+Q I +IP+ELK +YKTVWEIKQK +
Sbjct: 641 GEFFVVNPHLLNDLVQLDLWNDQMKQKLIAYNGSLQNIDEIPQELKNLYKTVWEIKQKAI 700
Query: 711 VDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFT 770
+DMA DRG +ID SQSLNI+M+QP + KL+S+HF+ W +GLKTG+YYLR++ AADAIKFT
Sbjct: 701 IDMAADRGAFIDQSQSLNIYMEQPTYAKLSSMHFYGWKKGLKTGVYYLRTQPAADAIKFT 760
Query: 771 VDTSVL 776
VD ++
Sbjct: 761 VDNQIV 766
>gi|156541405|ref|XP_001600772.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Nasonia vitripennis]
Length = 797
Score = 1005 bits (2598), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/813 (58%), Positives = 619/813 (76%), Gaps = 30/813 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+G ++ V+FDKIT R++KL +GL++++ DP+ ++Q V G+Y GV T +LD LA
Sbjct: 7 MHVLKRNGFKQEVNFDKITQRIRKLCHGLNMDYIDPLAITQCVINGLYPGVKTVELDNLA 66
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA MTT HPDYA LAARIV+S+LHK +K+FSE + D+Y + + P+I+++
Sbjct: 67 AEIAATMTTKHPDYAILAARIVISSLHKENRKTFSEVMDDLYKVIDPITKEHKPMISEEY 126
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+II K+ RL+S I YDRDF ++YFGFKTLE+SYL ++ G+VVERPQ MLMRVAV +HK
Sbjct: 127 NNIIQKHKDRLNSAIDYDRDFVFNYFGFKTLEKSYLFRINGQVVERPQDMLMRVAVALHK 186
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAG--TPR----AQLSSCFLVCMKDDSIEGIYDT 234
+D++ I+TY+ S+R+FTHASPTLF TP S CF++ M +DSIEGI++T
Sbjct: 187 EDLEKVIETYNYTSERYFTHASPTLFFCMYYTPTNVQVKNTSDCFILTMIEDSIEGIFET 246
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
LK CAIISKSAGGIG+SVHNIRA G+ I NG +NG+VPM+RVFN+T R++DQGG KR
Sbjct: 247 LKRCAIISKSAGGIGISVHNIRAKGTAIASNNGFANGLVPMIRVFNNTVRFIDQGGNKRP 306
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GAFA+YLEPWHADIFEFLDL+KN GKEE+RAR+LFYALW+PDLFM+RV N WSL CP+
Sbjct: 307 GAFALYLEPWHADIFEFLDLKKNIGKEEYRARELFYALWIPDLFMQRVLDNEKWSLMCPH 366
Query: 355 EAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKK 414
E PGL D WG EF +LY KYE+E + K+ + A++LW ILK+Q+ETGTPYML+KD CN+K
Sbjct: 367 ECPGLPDVWGDEFNKLYIKYEEEKRYKRQIVARDLWTAILKAQVETGTPYMLYKDHCNRK 426
Query: 415 SNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRG 474
SNQQNLGTIKSSNLCTE+IQY+SP E AVCNLASIA+ +V
Sbjct: 427 SNQQNLGTIKSSNLCTEIIQYSSPNEVAVCNLASIAVNMFV------------------D 468
Query: 475 SKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILL 534
+ +Y++F KL EV V +NL+KIID+N+YP+ A +SNL HRP+GIGVQGLAD F+L+
Sbjct: 469 VETQYYNFLKLKEVVKTVAKNLDKIIDLNHYPLIEAEKSNLMHRPVGIGVQGLADAFLLM 528
Query: 535 GMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP 594
PF+S EAQQLN IFET+Y+ AL S E+A GPY +Y+GSPVSKGILQ DMW V P
Sbjct: 529 RYPFESKEAQQLNIQIFETLYFGALEASCELAKENGPYSSYNGSPVSKGILQYDMWNVTP 588
Query: 595 SDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFV 654
++ WDW L+ I+K GVRNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF+
Sbjct: 589 TNLWDWAALKLKIAKYGVRNSLLLAPMPTASTAQILGNNESVEPYTSNIYTRRVLSGEFI 648
Query: 655 VVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMA 714
+VN HLL+DLT+ LW +KN+II ++GS+Q + I ++LK +YKTVWEI QK ++ MA
Sbjct: 649 IVNPHLLNDLTKRNLWDDEMKNEIIANNGSIQNVGHITQDLKELYKTVWEIPQKIILKMA 708
Query: 715 VDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTS 774
DRG +ID SQS+N+HM +P KLTS+HF+ W GLKTGMYYLR++ AA+A++FTV+ S
Sbjct: 709 ADRGAFIDQSQSVNVHMAKPTTEKLTSMHFYGWKAGLKTGMYYLRTKPAANALQFTVNKS 768
Query: 775 VLKENPKVTDDDDAKMAQMVCSLTNREE-CMAC 806
+L+ P T++ K + + N+E+ CM C
Sbjct: 769 LLR--PHATEEVKEKSNTI---MENKEDACMMC 796
>gi|410075976|ref|XP_003955570.1| hypothetical protein KAFR_0B01360 [Kazachstania africana CBS 2517]
gi|372462153|emb|CCF56435.1| hypothetical protein KAFR_0B01360 [Kazachstania africana CBS 2517]
Length = 845
Score = 1004 bits (2597), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/775 (59%), Positives = 606/775 (78%), Gaps = 15/775 (1%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG++E V FDKITAR+ +LSYGL E D V+Q++ G+Y+GV+T +LD LA
Sbjct: 1 MYVIKRDGRKEPVRFDKITARITRLSYGLDPERIDAAKVTQRIIAGIYEGVSTQELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AET A MTT HPDY++LAAR+ +SNLHK T K FS+ + +++++ N +G APL++ V
Sbjct: 61 AETCAYMTTIHPDYSTLAARLAISNLHKQTTKQFSQVVSNLHHYINPATGKHAPLVSKRV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YDI+MKN L+S I+YDRD++++YFGFKTLERSYLL+++ KVVERPQH+LMRVA+GIH
Sbjct: 121 YDIVMKNKDVLNSAIVYDRDYNFNYFGFKTLERSYLLRIEDKVVERPQHLLMRVALGIHM 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDI+SAI++Y++MS ++F HA+PTLFNAGTP Q+SSCFLV MKDDSI+GI++TLKECA+
Sbjct: 181 DDIESAIESYNLMSLKYFIHATPTLFNAGTPHPQMSSCFLVSMKDDSIDGIFETLKECAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV VH+IR + SYI GTNG + G++P++ +FN TAR+V QGG KR GA A +
Sbjct: 241 ISKSAGGIGVHVHDIRGSDSYIAGTNGKAKGMMPVVSIFNTTARFVTQGGNKRPGAIAFF 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH D+F+F+++RKNHG EE+RARDLF ALW+PDLFM+RV NG W+ F +EAPGL+
Sbjct: 301 LEPWHPDVFKFIEMRKNHGDEEYRARDLFPALWIPDLFMKRVADNGQWTFFSSSEAPGLS 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LY +YE+EG+ K ++AQ LW+ IL++Q ETGTP+M +KD N+KSNQ+NL
Sbjct: 361 DVYGDEFEELYERYEREGRG-KTIKAQKLWYAILEAQTETGTPFMCYKDAANQKSNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLC E+++Y++P ETAVCNLASI LP ++ S +K +
Sbjct: 420 GTIKSSNLCCEILEYSNPEETAVCNLASICLPTFIEY--------------SEDNKTSTY 465
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+F+KL V ++T NLN++ID NYYPV A+RSN+RHRPI +GVQGLADTF++L +PF+S
Sbjct: 466 NFDKLHSVAKVITRNLNRVIDNNYYPVPEAKRSNMRHRPIALGVQGLADTFMMLRLPFES 525
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA +LNK IFETIY+ +L S E+A +EG YET+ GSP S+GILQ DMW P WDW
Sbjct: 526 DEATKLNKQIFETIYHASLEASCELAQKEGHYETFPGSPASQGILQMDMWNAEPFGMWDW 585
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I K G+RNSL +APMPTASTSQI+G NECFEP TSN+Y RRVLSGEF +VN +L
Sbjct: 586 ETLRKDIVKYGIRNSLTMAPMPTASTSQIMGFNECFEPITSNMYQRRVLSGEFQIVNPYL 645
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W +K +I +GS+Q +P +P+ELK +YKTVWEI QK ++DMA DR Y
Sbjct: 646 LRDLVDLGIWDDSMKQYLITQNGSIQNLPNVPDELKELYKTVWEISQKKILDMAADRSIY 705
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
ID S SLN+ + P GK+TS+HF+ W +GLKTGMYYLR++AA+ AI+FT+D SV
Sbjct: 706 IDQSHSLNLFIRAPTMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTIDQSV 760
>gi|347482412|gb|AEO98353.1| ribonucleoside-diphosphate reductase [Emiliania huxleyi virus 203]
Length = 746
Score = 1000 bits (2585), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/754 (62%), Positives = 582/754 (77%), Gaps = 22/754 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V+KR+G E+V DKI RLK LSYGL +H DP +VS KV G+Y GVTT QLD LA
Sbjct: 1 MEVIKRNGTSESVQLDKIMKRLKNLSYGL--DHVDPAVVSIKVVQGLYDGVTTVQLDNLA 58
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
ETA +T HPDY+ LAARI VS+LHK T FS ++ +YN+ N ++G +PLIADD+
Sbjct: 59 VETATYLTMTHPDYSKLAARIAVSSLHKMTSNKFSSVMESLYNYVNTKTGQWSPLIADDI 118
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+ I NA D I Y++D +YD FG+KT+E+SYL ++ G +VERPQHMLMRVA+GIH
Sbjct: 119 IECIRSNAEVFDDVINYEKDLEYDIFGYKTMEKSYLSRINGDIVERPQHMLMRVAIGIHC 178
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D+D+AI+TY ++SQ+ FTHA+PT++NAGT Q+SSCFL+ MKDDSIEGI+DTLK CA+
Sbjct: 179 PDVDAAIETYKLLSQKKFTHATPTMYNAGTKNPQMSSCFLLKMKDDSIEGIFDTLKNCAL 238
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIGVS+HN+RA SYIRGT G SNG+VPMLRVF++TARYVDQGGGKRKGAFA+Y
Sbjct: 239 ISKNAGGIGVSIHNVRAQNSYIRGTGGYSNGLVPMLRVFDNTARYVDQGGGKRKGAFAMY 298
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEP HADIF+FL+LRKN GKEE RARDLFYALWV D FM+RV++ WSLFCP+E PGL+
Sbjct: 299 LEPHHADIFDFLELRKNTGKEELRARDLFYALWVSDHFMKRVEAGKNWSLFCPHECPGLS 358
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG ++ LY KYE +GKA+K + AQ LWF I+ SQIETGTPYML+KD+CN+KSNQQ+L
Sbjct: 359 DVWGDDYVALYEKYESDGKARKTIPAQKLWFAIMDSQIETGTPYMLYKDSCNRKSNQQHL 418
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+ SNLCTE+I+YT+P ETAVCNLASIALP +V++ GS F
Sbjct: 419 GTIQQSNLCTEIIEYTAPDETAVCNLASIALPAFVKD-------------GS-------F 458
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D + L +VT T NL+K+ID NYYP+ A RSN+RHRPIG+GVQGLAD F++L M FDS
Sbjct: 459 DHQHLYDVTYHATCNLDKVIDKNYYPIPEAERSNMRHRPIGLGVQGLADVFMMLKMAFDS 518
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
+A+ LNK+IFET+Y+ A+ S ++A +G Y TY GSP+SKG Q DMW V PSDRW+W
Sbjct: 519 HDARVLNKEIFETMYFAAMTASCDLAKTKGKYSTYEGSPLSKGKFQFDMWNVTPSDRWNW 578
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR + K+G RNSLL+APMPTAST+QILGNNECFEPYTSN+YSRRVLSGEF VVN HL
Sbjct: 579 DTLRSNVKKHGARNSLLLAPMPTASTAQILGNNECFEPYTSNLYSRRVLSGEFPVVNTHL 638
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
+ DL++ GLW +KN II +GSVQ IP PE+LK IYKTVWEI +TL+DM+ DRG +
Sbjct: 639 VKDLSDRGLWGDSMKNYIIAANGSVQNIPGFPEDLKPIYKTVWEISMRTLIDMSADRGAF 698
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTG 754
I SQS N+ M QP KLTS+HF+ W GLKTG
Sbjct: 699 ICQSQSFNVFMTQPTSAKLTSMHFYGWKSGLKTG 732
>gi|428169292|gb|EKX38227.1| hypothetical protein GUITHDRAFT_158515 [Guillardia theta CCMP2712]
Length = 831
Score = 999 bits (2584), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/776 (59%), Positives = 609/776 (78%), Gaps = 20/776 (2%)
Query: 3 VVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAE 62
+ KRDGK++ + K+ AR+ +L GL+ + D + KV G +G+ + ++DELAAE
Sbjct: 2 ITKRDGKKQPLKRFKLHARIARLVDGLNADFVDIDQIVDKVVAGTCQGIKSQEIDELAAE 61
Query: 63 TAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYD 122
TAA + T+HPDY+ LAARI VS LHK T+++FS+ IK +YNH + +SG K P IA DVY+
Sbjct: 62 TAAYLATDHPDYSQLAARISVSALHKVTQQTFSQKIKALYNHVHSKSGAKGPKIASDVYE 121
Query: 123 IIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDD 182
I+++NA LD+ I Y RDF +DYFG+KTLERSYLL+++G VVERPQ M MRV+VGIHK D
Sbjct: 122 IVIENAETLDAAIDYSRDFTFDYFGYKTLERSYLLRIEGHVVERPQDMFMRVSVGIHKQD 181
Query: 183 IDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIIS 242
ID+AI+TY++MS ++FTHA+PTLFNAGTPR QLSSCFL+ +KDDSIEGIY+T+ +CA IS
Sbjct: 182 IDAAIQTYNLMSLKFFTHATPTLFNAGTPRNQLSSCFLLQLKDDSIEGIYETVGKCATIS 241
Query: 243 KSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLE 302
AGGIG+SVHN+RA GSY+ ++G +NG++PML+VFN TAR QG GKR GAFAVYLE
Sbjct: 242 AQAGGIGISVHNVRARGSYVENSSGIANGLIPMLKVFNSTARLCSQGAGKRPGAFAVYLE 301
Query: 303 PWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADC 362
PWHA+IFEFL+L+KN G E+ RARDLFYALW+PDLFM+R +++G WSLFCP EAPGL +
Sbjct: 302 PWHAEIFEFLELKKNFGSEDLRARDLFYALWMPDLFMKRCEADGAWSLFCPVEAPGLCET 361
Query: 363 WGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGT 422
+G +FE LY +YE+EG+A+K ++A+ LWF IL++Q+E G PY+L+KD N+KSNQ+NLG
Sbjct: 362 YGEKFEELYERYEREGRARKTIKARELWFAILEAQVENGIPYLLYKDAANEKSNQKNLGI 421
Query: 423 IKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDF 482
IK SNLCTE+++YTS E AVCNLASI LPR+V E FD
Sbjct: 422 IKCSNLCTEIMEYTSKDEVAVCNLASICLPRFVVE--------------------GQFDH 461
Query: 483 EKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTE 542
+ L EVT ++T NLNKIID+N YPV+ A+ SN RHRPIGIGVQGLAD F+LL +PF+S E
Sbjct: 462 KLLFEVTIVITRNLNKIIDINLYPVKEAQTSNFRHRPIGIGVQGLADVFLLLRLPFESEE 521
Query: 543 AQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGG 602
A+QLN+DIFETIY+ A+ S+++A G Y ++ GSP S G+LQ D+WG PS RWDW
Sbjct: 522 ARQLNRDIFETIYFAAMTASNQLAKDHGAYSSFRGSPASMGLLQFDLWGAEPSPRWDWTS 581
Query: 603 LRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLH 662
L++ I ++G+RNSL VAPMPTAST+QI+GNNECFEPYTSNIY+RRV++G+F+V+N HLL
Sbjct: 582 LKESIKEHGLRNSLTVAPMPTASTAQIMGNNECFEPYTSNIYNRRVMAGDFLVLNPHLLK 641
Query: 663 DLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYID 722
DL +GLWS +K++I+ DGS+Q I +IP++++ +YKT WEIKQ+ L+DMA DRG +ID
Sbjct: 642 DLIALGLWSQKMKHRIMAYDGSIQDILEIPKDIRELYKTAWEIKQRCLIDMAADRGAFID 701
Query: 723 HSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE 778
SQSLN+ ++ P+ KLTS+HF+AW +GLKTG+YYLR+RAAADAIKFT+D S + E
Sbjct: 702 QSQSLNLFLEAPDTAKLTSMHFYAWRKGLKTGVYYLRTRAAADAIKFTLDHSTVVE 757
>gi|403339052|gb|EJY68774.1| Ribonucleoside-diphosphate reductase [Oxytricha trifallax]
Length = 857
Score = 999 bits (2583), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/779 (60%), Positives = 601/779 (77%), Gaps = 20/779 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
+YV+KRDG ++ + DKI R++ YGL+ + + +V KV +G++ GVTT++LD L
Sbjct: 20 IYVIKRDGTKQEIDQDKIRRRMECHMYGLNEKFINKEVVVNKVFSGIFSGVTTAELDNLT 79
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AET A M HPDY+ LAARI +SNLHK T F + + N + ++ G A L+A+DV
Sbjct: 80 AETCAYMNMVHPDYSKLAARIAISNLHKKTSSQFIDVASKLRN-FKDKIGRDAALLAEDV 138
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+D+I+KN + S I+YDRD++YDYFGF+TLER+YLLK +++ERPQHMLMRV++GIHK
Sbjct: 139 FDVIVKNQDLIQSRIVYDRDYNYDYFGFRTLERAYLLKDGNQILERPQHMLMRVSIGIHK 198
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+D++SA +TY +MSQ WFTHA+PTLFN+GTP+ Q+SSCFL+ +K+DSI+GI++TLK+ AI
Sbjct: 199 EDLESAFETYDLMSQLWFTHATPTLFNSGTPKPQMSSCFLLTVKEDSIDGIFETLKQIAI 258
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIGVSV ++RA SYIRGTNG SNG++PML+VFNDTARYVDQGGGKRKGAFAVY
Sbjct: 259 ISKAAGGIGVSVSDVRAADSYIRGTNGYSNGLIPMLKVFNDTARYVDQGGGKRKGAFAVY 318
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWHADI++FL LRKNHGKEE+RARDLFYALW PDLFM RV++N W+L CPNE PGL
Sbjct: 319 VEPWHADIYDFLQLRKNHGKEENRARDLFYALWTPDLFMRRVEANEDWTLMCPNECPGLT 378
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
WG EFE+LY +YE G+ +K V+A+ LW +I++SQ ETGTPYML+KD CN+KSNQQNL
Sbjct: 379 TTWGEEFEKLYIEYETTGRGRKTVKARWLWGQIIESQNETGTPYMLYKDACNRKSNQQNL 438
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE++++TSP E AVCNLASIAL R+V + + + +
Sbjct: 439 GTIKSSNLCTEIVEFTSPDEVAVCNLASIALNRFVLK------------------ETQEY 480
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D+EKL VT +T+NLNKIID NYYPV AR SNLRHRPIGIGVQG AD +L +PF+
Sbjct: 481 DYEKLHYVTKRITKNLNKIIDNNYYPVPEARNSNLRHRPIGIGVQGFADALQMLKIPFED 540
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP-SDRWD 599
+A +LN+ IFETIY+ A+ S E A EGPYET+ GSP+SKG+ Q D+W P SDR+D
Sbjct: 541 QKALRLNELIFETIYHAAMEASMEQAKVEGPYETFPGSPLSKGLFQFDLWNKKPCSDRYD 600
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR + + G RNSLL+APMPTASTSQILGNNE FEPYTSN+Y+RRVL+GEFV VN H
Sbjct: 601 WEQLRKDVIQYGARNSLLLAPMPTASTSQILGNNETFEPYTSNVYTRRVLAGEFVCVNPH 660
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
L+ DL + L+S IKN ++ +GS+QKI IP+ +K +YKTVWEI QK L+D+A+ RG
Sbjct: 661 LVQDLIDNDLFSSDIKNSLLGLNGSIQKIKSIPQNIKDLYKTVWEIPQKVLLDLAIGRGP 720
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE 778
YI SQS NI+M +PNF K+TS+HF+ W GLKTG YYLRS+ + DAIKFTVD L E
Sbjct: 721 YICQSQSTNIYMGEPNFAKMTSMHFYGWKNGLKTGQYYLRSKPSRDAIKFTVDIEHLLE 779
>gi|332023837|gb|EGI64061.1| Ribonucleoside-diphosphate reductase large subunit [Acromyrmex
echinatior]
Length = 854
Score = 999 bits (2583), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 491/849 (57%), Positives = 619/849 (72%), Gaps = 67/849 (7%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+G++E VHFDKIT+R+ K Y L + + DP V+ +V G+Y GVTT LD LA
Sbjct: 32 MHVIKRNGRKEDVHFDKITSRIVKQCYNLDMNYVDPSAVAIQVIRGLYSGVTTVVLDNLA 91
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMY-------NHYNERSGLKA 113
AETAA M T HPDYA LAARI VSNLHK TKKSFSE + D++ NHYN
Sbjct: 92 AETAATMATKHPDYAILAARIDVSNLHKETKKSFSEVMHDLHYAKNPVTNHYN------- 144
Query: 114 PLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMR 173
P+I+ Y+II NA +LDS IIYDRDF+Y+Y GFKTLERSYLLK+ GK+VERPQHMLMR
Sbjct: 145 PIISKHYYNIIKNNAEKLDSAIIYDRDFNYNYIGFKTLERSYLLKINGKIVERPQHMLMR 204
Query: 174 VAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYD 233
VAVGIH+++ID I+TY+ +S+R+FTHASPTLFNA T Q+SSCFL+ ++DDSI+ I+
Sbjct: 205 VAVGIHENNIDKVIETYNYLSERYFTHASPTLFNACTNNQQMSSCFLLTLEDDSIKSIFG 264
Query: 234 TLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKR 293
TLK CA+ISK AGGIG++VH IRA T T NG++ +L+++ND A YVDQGG KR
Sbjct: 265 TLKNCALISKYAGGIGLNVHCIRAKNVEDTSTKRT-NGLISILKLYNDMAIYVDQGGNKR 323
Query: 294 KGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCP 353
GAFA+YLEPWHADIF+FL+L++N G RARDLFY LW+PDLFMERV ++ +WSL CP
Sbjct: 324 PGAFAIYLEPWHADIFDFLELKRNIGDGNMRARDLFYGLWIPDLFMERVYNDEMWSLMCP 383
Query: 354 NEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNK 413
+E+PGL+D WG EF+ LYT+YEKEG+ KK V+A+++W IL+SQ+ETGTPYML+KD CN+
Sbjct: 384 HESPGLSDVWGDEFKELYTRYEKEGRYKKQVEARSVWLAILRSQVETGTPYMLYKDHCNR 443
Query: 414 KSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSR 473
KSN Q++GT+K SNLCTE+I+Y+ P E AVCNLASIA+ +V
Sbjct: 444 KSNHQHIGTVKCSNLCTEIIEYSGPGEVAVCNLASIAVNMFV------------------ 485
Query: 474 GSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFIL 533
+ FDF+KL V IVT NL+K+IDVN+YP+E R SN RHRPIGIG+QGLAD F+L
Sbjct: 486 NIDTKIFDFDKLKTVAKIVTRNLDKVIDVNFYPIEETRTSNHRHRPIGIGIQGLADAFLL 545
Query: 534 LGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVN 593
+ PF+S EA++LN IFET+YY AL S E+AA +G YETY GSPVSKGILQ DMW V
Sbjct: 546 MRYPFESKEAKELNIKIFETLYYGALEASCELAAEKGTYETYQGSPVSKGILQYDMWNVK 605
Query: 594 PSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEF 653
P++ WDW L+ I+K+GVRNSLL+APMPTAST+QILGNNE EPYTSNIY RRVLSGEF
Sbjct: 606 PTNLWDWDELKAKIAKHGVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYVRRVLSGEF 665
Query: 654 VVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDM 713
++VN HLL DLT GLW +KN+I+ + GSVQ I +IP++LK +YKTVWEI QK +++M
Sbjct: 666 IIVNPHLLRDLTSRGLWDEDMKNEILANFGSVQNIERIPDDLKELYKTVWEIPQKVILEM 725
Query: 714 AVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDT 773
A DRG ++D SQSLN+H+ P KLTS+HF W GLKTGMYYLR++ AA+ I+FTVD
Sbjct: 726 AADRGAFVDQSQSLNVHIGDPTTEKLTSMHFFGWKSGLKTGMYYLRTKPAANPIQFTVDK 785
Query: 774 SVLK---------------------ENPKVTDDDDAKM-------------AQMVCSLTN 799
S L+ ++P DDDA+ A + CS N
Sbjct: 786 SKLQNRDSVSNVSDASTSVVNSTPIQSPNQDSDDDAEKRKQLSTQARKNLDAMLACSRKN 845
Query: 800 REECMACGS 808
+E+CMAC S
Sbjct: 846 KEDCMACSS 854
>gi|209878422|ref|XP_002140652.1| ribonucleoside-diphosphate reductase, large subunit
[Cryptosporidium muris RN66]
gi|209556258|gb|EEA06303.1| ribonucleoside-diphosphate reductase, large subunit, putative
[Cryptosporidium muris RN66]
Length = 809
Score = 999 bits (2582), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 479/823 (58%), Positives = 616/823 (74%), Gaps = 37/823 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+ R GK+E V FD+I +R+ KLSYGL DP V+Q V G+Y G+ TS+LDELA
Sbjct: 5 MYVINRRGKEEPVSFDQILSRISKLSYGLH-PLVDPARVAQAVINGMYSGIKTSELDELA 63
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
++T A M +HPD++ LAARI +SNLHKNT E + + + + G APL++ V
Sbjct: 64 SQTCAYMAASHPDFSKLAARISISNLHKNTHSDIFEVANQLIS-FKDVHGNPAPLLSQTV 122
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+ I++N RL+S I + RDF+YDYF FKTLERSYLL+V K+VERPQH+LMRV+ GIH
Sbjct: 123 YEFIIENKDRLNSVIDFSRDFEYDYFAFKTLERSYLLRVDDKIVERPQHLLMRVSCGIHY 182
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+ID+AI+TY ++SQ++FTHA+PTLFNAGT R Q+SSCF++ M DDSI+GI+DTLK+CA
Sbjct: 183 GNIDAAIETYELLSQKYFTHATPTLFNAGTLRPQMSSCFILKMSDDSIDGIFDTLKKCAN 242
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGG+GV++ NIRA GSYIRGTNG SNG++PMLRV+NDTARYVDQGGGKRKGA AVY
Sbjct: 243 ISKTAGGLGVAISNIRAAGSYIRGTNGRSNGLIPMLRVYNDTARYVDQGGGKRKGALAVY 302
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADI EF+++RKNHGKEE R RD+F ALW+PDLFMERV+ + W+L CP+E PG+
Sbjct: 303 LEPWHADILEFIEIRKNHGKEEMRCRDIFPALWIPDLFMERVEKDANWTLMCPDECPGMQ 362
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG +F+ LY YEKEG+ +K ++AQ+LWF +L+SQIETGTP++ +KD N+KSNQQNL
Sbjct: 363 DVWGDQFKELYEHYEKEGRGRKTIKAQSLWFALLQSQIETGTPFICYKDAANRKSNQQNL 422
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+++YTS E AVCNLASI LPR+V +N+ F
Sbjct: 423 GTIKSSNLCTEIMEYTSSDEVAVCNLASIGLPRFV------------------DRENKKF 464
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL EV + NLNK+ID YYP+ RRSNLRHRP+G+GVQGLAD F++L P++S
Sbjct: 465 DFKKLYEVVKVAIRNLNKVIDRGYYPIPECRRSNLRHRPLGLGVQGLADCFMILRYPYES 524
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSD-RWD 599
+A++LN +IFETIYY AL S E+A + GPYET+ GSP S+G+LQ D+W V PS W+
Sbjct: 525 KDARKLNIEIFETIYYAALDASCELAEKYGPYETFQGSPASRGLLQFDLWNVQPSSGLWN 584
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L++ I+K G+RNSLLVAPMPTASTSQ+LGNNE FEP+TSNIY RRVLSGEF VVN H
Sbjct: 585 WDLLKEKIAKYGLRNSLLVAPMPTASTSQLLGNNESFEPFTSNIYHRRVLSGEFFVVNPH 644
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL+DL E+GLW +K II ++GSVQ I IP +++ +YKTVWEI+QK ++DMA DRG
Sbjct: 645 LLNDLLELGLWDERLKQNIIANNGSVQNIESIPRDIRDLYKTVWEIRQKAVIDMAADRGP 704
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN 779
YI SQSLNI++ N+ KL+S+HF+ W +GLKTG YYLR+++AA+ I+FT+D +LK
Sbjct: 705 YICQSQSLNIYIANANYAKLSSMHFYGWKKGLKTGSYYLRTQSAANPIQFTIDQQLLKST 764
Query: 780 PKVTDDDDAK------------MAQMVCSL----TNREECMAC 806
+ DAK + M C L EEC+ C
Sbjct: 765 ADKNKEQDAKRPALQNSSQGDGRSVMACPLRPANLQGEECLMC 807
>gi|347600629|gb|AEP15116.1| ribonucleoside-diphosphate reductase [Emiliania huxleyi virus 88]
Length = 746
Score = 998 bits (2580), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 473/754 (62%), Positives = 581/754 (77%), Gaps = 22/754 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V+KR+G E+V DKI RLK LSYGL +H DP +VS KV G+Y GVTT QLD LA
Sbjct: 1 MEVIKRNGTSESVQLDKIMKRLKNLSYGL--DHVDPAVVSIKVVQGLYDGVTTVQLDNLA 58
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
ETA +T HPDY+ LAARI VS+LHK T FS ++ +YN+ N ++G +PLIADD+
Sbjct: 59 VETATYLTMTHPDYSKLAARIAVSSLHKMTSNKFSSVMESLYNYVNTKTGQWSPLIADDI 118
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+ I NA LD I Y++D +YD FG+KT+E+SYL ++ G +VERPQHMLMRVA+GIH
Sbjct: 119 IECIRSNAVVLDDVINYEKDLEYDIFGYKTMEKSYLSRINGDIVERPQHMLMRVAIGIHC 178
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D+D+AI+TY ++S R FTHA+PT++NAGT Q+SSCFL+ MKDDSIEGI+DTLK CA+
Sbjct: 179 PDVDAAIETYKLLSARVFTHATPTMYNAGTRNPQMSSCFLLKMKDDSIEGIFDTLKNCAL 238
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIGVS+HN+RA SYIRGT G SNG+VPMLRVF++TARYVDQGGGKRKGAFA+Y
Sbjct: 239 ISKNAGGIGVSIHNVRAQNSYIRGTGGYSNGLVPMLRVFDNTARYVDQGGGKRKGAFAMY 298
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEP HADIFEFL+LRKN GKEE RARDLFYALWV D FM+RV++ WSLFCP+E PGL+
Sbjct: 299 LEPHHADIFEFLELRKNTGKEELRARDLFYALWVSDHFMKRVEAGKNWSLFCPHECPGLS 358
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG ++ LY KYE EGKA+K + AQ LWF I+ SQIETGTPYML+KD+CN+KSNQQ+L
Sbjct: 359 DVWGDDYVALYEKYESEGKARKTIPAQKLWFAIMDSQIETGTPYMLYKDSCNRKSNQQHL 418
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+ SNLCTE+I+YT+P ETAVCNLASIALP +V++ GS F
Sbjct: 419 GTIQQSNLCTEIIEYTAPDETAVCNLASIALPSFVKD-------------GS-------F 458
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D + L +VT T NL+K+ID NYYP+ A RSN+RHRPIG+GVQGLAD F++L M FDS
Sbjct: 459 DHQHLYDVTYHATCNLDKVIDKNYYPIPEAERSNMRHRPIGLGVQGLADVFMMLKMAFDS 518
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
+A+ LNK+IFET+Y+ A+ S ++A +G Y TY GSP+SKG Q DMW V PS RW+W
Sbjct: 519 PDARVLNKEIFETMYFAAMTASCDLAKTKGKYSTYEGSPLSKGKFQFDMWNVTPSVRWNW 578
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR + K+G RNSL+ APMPTAST+QILGNNECFEP+TSN+YSRRVLSGEF VVNK+L
Sbjct: 579 DTLRSNVKKHGTRNSLVTAPMPTASTAQILGNNECFEPFTSNLYSRRVLSGEFPVVNKYL 638
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
+ DL++ GLW +KN II +GSVQ IP PE+LK IYKTVWEI +TL+DMA DRG +
Sbjct: 639 VKDLSDRGLWGDSMKNYIIAANGSVQNIPGFPEDLKPIYKTVWEISMRTLIDMAADRGAF 698
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTG 754
I SQS N+ M QP KLTS+HF+ W GLKTG
Sbjct: 699 ICQSQSFNVFMTQPTSAKLTSMHFYGWKSGLKTG 732
>gi|347481982|gb|AEO97968.1| ribonucleoside-diphosphate reductase [Emiliania huxleyi virus 84]
Length = 746
Score = 998 bits (2579), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/754 (62%), Positives = 582/754 (77%), Gaps = 22/754 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V+KR+G E+V DKI RLK LSYGL +H DP +VS KV G+Y GVTT QLD LA
Sbjct: 1 MEVIKRNGTSESVQLDKIMKRLKNLSYGL--DHVDPAVVSIKVVQGLYDGVTTVQLDNLA 58
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
ETA +T HPDY+ LAARI VS+LHK T FS ++ +YN+ N ++G +PLIADD+
Sbjct: 59 VETATYLTMTHPDYSKLAARIAVSSLHKMTSNKFSSVMESLYNYVNTKTGQWSPLIADDI 118
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+ I NA LD I Y++D +YD FG+KT+E+SYL ++ G +VERPQHMLMRVA+GIH
Sbjct: 119 IECIRSNAVVLDDVINYEKDLEYDIFGYKTMEKSYLSRINGDIVERPQHMLMRVAIGIHC 178
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D+D+AI+TY ++S R FTHA+PT++NAGT Q+SSCFL+ MKDDSIEGI+DTLK CA+
Sbjct: 179 PDVDAAIETYKLLSARVFTHATPTMYNAGTRNPQMSSCFLLKMKDDSIEGIFDTLKNCAL 238
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIGVS+HN+RA SYIRGT G SNG+VPMLRVF++TARYVDQGGGKRKGAFA+Y
Sbjct: 239 ISKNAGGIGVSIHNVRAQNSYIRGTGGYSNGLVPMLRVFDNTARYVDQGGGKRKGAFAMY 298
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEP HADIFEFL+LRKN GKEE RARDLFYALWV D FM+RV++ WSLFCP+E PGL+
Sbjct: 299 LEPHHADIFEFLELRKNTGKEELRARDLFYALWVSDHFMKRVEAGKNWSLFCPHECPGLS 358
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG ++ LY KYE EGKA+K + AQ LWF I+ SQIETGTPYML+KD+CN+KSNQQ+L
Sbjct: 359 DVWGDDYVALYEKYESEGKARKTIPAQKLWFAIMDSQIETGTPYMLYKDSCNRKSNQQHL 418
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+ SNLCTE+I+YT+P ETAVCNLASIALP +V++ GS F
Sbjct: 419 GTIQQSNLCTEIIEYTAPDETAVCNLASIALPAFVKD-------------GS-------F 458
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D ++L +VT T NL+K+ID NYYP+ A RSN+RHRPIG+GVQGLAD F++L M FDS
Sbjct: 459 DHQQLYDVTYHATCNLDKVIDKNYYPIPEAERSNMRHRPIGLGVQGLADVFMMLKMAFDS 518
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
+A+ LNK+IFET+Y+ A+ S ++A +G Y TY GSP+SKG Q D+W V PS RW+W
Sbjct: 519 PDARVLNKEIFETMYFAAMTASCDLAKTKGKYSTYEGSPLSKGKFQFDLWNVTPSVRWNW 578
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR + K+G RNSL+ APMPTAST+QILGNNECFEP+TSN+YSRRVLSGEF VVNK+L
Sbjct: 579 DTLRSNVKKHGTRNSLVTAPMPTASTAQILGNNECFEPFTSNLYSRRVLSGEFPVVNKYL 638
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
+ DL++ GLW +KN II +GSVQ IP PE+LK IYKTVWEI +TL+DMA DRG +
Sbjct: 639 VKDLSDRGLWGDSMKNYIIAANGSVQNIPGFPEDLKPIYKTVWEISMRTLIDMAADRGAF 698
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTG 754
I SQS N+ M QP KLTS+HF+ W GLKTG
Sbjct: 699 ICQSQSFNVFMTQPTSAKLTSMHFYGWKSGLKTG 732
>gi|2244677|emb|CAA67423.1| ribonucleotide reductase [Spodoptera littoralis NPV]
Length = 781
Score = 997 bits (2578), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/770 (60%), Positives = 595/770 (77%), Gaps = 21/770 (2%)
Query: 5 KRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETA 64
KRDG++E V KI R++K YGL + +P ++++V G+Y GVTT +LD L AETA
Sbjct: 4 KRDGRKEDVSVRKIKYRIEKQCYGLDMYFVNPASLTRRVVQGIYPGVTTVELDNLIAETA 63
Query: 65 AAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDII 124
A+MT +H DY+ LAAR+ VSNLHK TK F I DMY ++++G P+I+D Y II
Sbjct: 64 ASMTIDHSDYSLLAARLAVSNLHKETKDLFFNVIVDMYEAIDQKTGAATPMISDFHYGII 123
Query: 125 MKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDID 184
NA RL+S I++DRDF+YDYFGFKT++RSYL K+ G VERPQ+M+MRVA+GIH DID
Sbjct: 124 AANADRLNSAIMHDRDFNYDYFGFKTMQRSYLFKINGITVERPQYMMMRVAIGIHGRDID 183
Query: 185 SAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKS 244
+AI+TY++MS +FTHASPTLF+A TP+AQ+SSCFLV +K+DSIEGIYDTLK+CA+ISKS
Sbjct: 184 AAIETYNLMSNGYFTHASPTLFSAATPKAQMSSCFLVAIKEDSIEGIYDTLKQCAMISKS 243
Query: 245 AGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPW 304
GGIG VHN+RA GS + G +G +NG+VPMLRV+N+TARYV+QGG KR GAFAVY+EPW
Sbjct: 244 GGGIGFHVHNVRAKGSSVAGVDGAANGLVPMLRVYNNTARYVNQGGNKRPGAFAVYVEPW 303
Query: 305 HADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWG 364
HAD+F+FLDL+KN GKEE RAR+LFYALW+PDLFM RV+++ +WSL CP ++PGLA
Sbjct: 304 HADVFDFLDLKKNTGKEEVRARELFYALWIPDLFMRRVETDAMWSLMCPMQSPGLAIVTV 363
Query: 365 TEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIK 424
EFE LY KYEK+G+ K V AQ LW I+++Q+ETGTPYML+KD+CN+KSNQ NLGTIK
Sbjct: 364 FEFEALYEKYEKQGRYVKRVSAQTLWRAIIEAQVETGTPYMLYKDSCNRKSNQSNLGTIK 423
Query: 425 SSNLCTEVIQYTSPTETAVCNLASIALPRYVR-EMGVPMESHPSKLVGSRGSKNRYFDFE 483
SNLCTE+++YTS E AVCNLASIA+ ++V + GV +DFE
Sbjct: 424 CSNLCTEIVEYTSKDEVAVCNLASIAVNKFVAPQPGV-------------------YDFE 464
Query: 484 KLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEA 543
+L E+T NLN+IID N P+ A RSN R+RPIGIGVQG+AD F+ + MPF+S A
Sbjct: 465 RLKEITKSCDRNLNRIIDANQCPLREAERSNQRNRPIGIGVQGMADAFVTMRMPFESDAA 524
Query: 544 QQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMW-GVNPSDRWDWGG 602
+LNK IFETI+Y AL + E+AA++GPYETY GSP S+G LQ DMW G PS+ WDW
Sbjct: 525 AELNKKIFETIFYGALEANCELAAKDGPYETYKGSPASRGELQYDMWNGATPSNLWDWSL 584
Query: 603 LRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLH 662
L+ ISK G+RNSLL+APMPTAST+QILGNNE FEP+TSNIY RRVLSGEF VVN+HL+
Sbjct: 585 LKSKISKYGLRNSLLLAPMPTASTAQILGNNESFEPFTSNIYQRRVLSGEFQVVNRHLVK 644
Query: 663 DLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYID 722
DL +GLW+ +KN I+Y++GSVQ I IP E++ +YKTVWE+ +T++ MA DRG +ID
Sbjct: 645 DLAAIGLWNDTMKNLIMYNNGSVQNIESIPFEIRQLYKTVWEMSMRTMIRMAADRGAFID 704
Query: 723 HSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
SQS N++M +P++GKLTS+HF+AW GLKTGMYYLR++ A ++I+FTVD
Sbjct: 705 QSQSFNVYMAEPSYGKLTSIHFYAWKMGLKTGMYYLRTKPAVNSIQFTVD 754
>gi|307180389|gb|EFN68415.1| Ribonucleoside-diphosphate reductase large subunit [Camponotus
floridanus]
Length = 889
Score = 995 bits (2573), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 476/783 (60%), Positives = 600/783 (76%), Gaps = 20/783 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+G++E VHFDKIT+R+ K Y L + + DP V+ +V G+Y GVTT LD LA
Sbjct: 32 MHVIKRNGRKEDVHFDKITSRIAKQCYNLDMNYVDPSAVAIQVIRGLYSGVTTVILDNLA 91
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA M TNHPDYA LAARI VSNLHK TKK+FS+ + D+Y+ + + P+I +
Sbjct: 92 AETAATMATNHPDYAILAARIDVSNLHKETKKNFSKVMHDLYHARDSVTNQHTPIINERY 151
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+II NA +LDS IIYDRDF Y+Y GFKTLERSYLLK+ GK+VERPQHMLMRVAVGIH+
Sbjct: 152 YNIIKNNAEKLDSAIIYDRDFSYNYIGFKTLERSYLLKINGKIVERPQHMLMRVAVGIHE 211
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DID AI+TY+ +S+R+FTHASPTLFNA T Q+SSCFL+ + +DSI+GI+ TLK+CA+
Sbjct: 212 TDIDKAIETYNYLSERYFTHASPTLFNACTNNQQMSSCFLLTLDNDSIKGIFGTLKKCAL 271
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG++VH IRA + T+NG+V +L+++ND A YVDQGG KR GAFA+Y
Sbjct: 272 ISKYAGGIGLNVHCIRAKST--EDNTDTTNGLVSVLKLYNDMAIYVDQGGNKRPGAFAIY 329
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+FL+LR+N G RARDLFY LW+PDLFMERV +N WSL CP+E+PGLA
Sbjct: 330 LEPWHADIFDFLELRRNIGDGNMRARDLFYGLWIPDLFMERVYNNENWSLMCPHESPGLA 389
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG EF+ LY +YEKEG+ KK V+A+ +W IL+SQ+ETGTPYML+KD CN+KSN Q++
Sbjct: 390 DVWGDEFKELYIRYEKEGRYKKQVEARAVWVAILRSQVETGTPYMLYKDHCNRKSNHQHI 449
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTEVIQY+ P E AVCNLASIA+ +V + N+ F
Sbjct: 450 GTIKCSNLCTEVIQYSGPGEVAVCNLASIAVNMFV------------------NTNNKTF 491
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL + +VT NL+K+IDVN+YP+ + SN +HRPIGIG+QGLAD F+L+ PF+S
Sbjct: 492 DFDKLKTIAKVVTRNLDKVIDVNFYPIVETKTSNQKHRPIGIGIQGLADAFLLMRYPFES 551
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LN IFET+YY AL S ++AA +G YETY GSPVSKGILQ DMW V P++ WDW
Sbjct: 552 KEAKELNIKIFETLYYGALEASCKLAAEKGTYETYEGSPVSKGILQYDMWNVKPTNLWDW 611
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K+GVRNSLL+APMPTAST+QILGNNE EPYTSNIY RRVLSGEFV+VN HL
Sbjct: 612 DKLKEKIAKHGVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYVRRVLSGEFVIVNPHL 671
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLT GLW ++N+I+ GSVQ I +IP++LK +YKTVWEI QK +++MA DRG +
Sbjct: 672 LRDLTARGLWDEDMQNEILASFGSVQNIDRIPDDLKVLYKTVWEIPQKVILEMAADRGAF 731
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLN+H+ P KLTS+HF W GLKTGMYYLR++ AA+ I+FTVD S L+ N
Sbjct: 732 IDQSQSLNVHIGDPTTEKLTSMHFFGWRSGLKTGMYYLRTKPAANPIQFTVDKSKLRNND 791
Query: 781 KVT 783
++
Sbjct: 792 SIS 794
>gi|403366375|gb|EJY82990.1| Ribonucleoside-diphosphate reductase [Oxytricha trifallax]
Length = 864
Score = 994 bits (2569), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 475/801 (59%), Positives = 608/801 (75%), Gaps = 26/801 (3%)
Query: 3 VVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAE 62
V KR+G EA+ KI ARL+KL L+ ++ + ++ KV + G+ T+ LD L +E
Sbjct: 23 VTKRNGTMEAMQVGKIRARLEKLLENLAYKYINLDIIITKVVSYAQNGIKTTDLDNLLSE 82
Query: 63 TAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYD 122
T A + HPDY LA+R+ V+ LHK T + F E I +YN Y E + A LIA+DVY
Sbjct: 83 TTAYLNILHPDYGKLASRVAVTKLHKETSEDFFEVISTLYN-YTEYARGDAALIAEDVYK 141
Query: 123 IIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDD 182
++ +N +L + + Y RD+DYDYFGFKTLERSYLLKV K+VERPQHMLMRV+VGIHK D
Sbjct: 142 VVEENKEKLQAALNYKRDWDYDYFGFKTLERSYLLKVNSKIVERPQHMLMRVSVGIHKKD 201
Query: 183 IDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIIS 242
IDSAI+TY++MS RWFTHA+PTLFNAGTP+ Q+SSCFL+ MKDDSI GIYDTLK A+IS
Sbjct: 202 IDSAIETYNLMSDRWFTHATPTLFNAGTPKPQMSSCFLLMMKDDSINGIYDTLKNIALIS 261
Query: 243 KSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLE 302
KSAGG+G++VHNIRATGSYI+GTNG SNG+VPMLRVFN+TARYVDQGGGKRKG+FA+YLE
Sbjct: 262 KSAGGVGLAVHNIRATGSYIKGTNGHSNGLVPMLRVFNETARYVDQGGGKRKGSFAIYLE 321
Query: 303 PWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADC 362
PWHAD+F+FL LRKNHGKEE RARDLF+ALW+PDLFM+RVQ++G W+LFCPNEA GL +
Sbjct: 322 PWHADVFDFLQLRKNHGKEEQRARDLFFALWIPDLFMKRVQADGDWTLFCPNEAKGLFEV 381
Query: 363 WGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGT 422
G EFE LYTKYE++G +K ++AQ LW I++SQIETGTPYML+KD N KSNQ+NLGT
Sbjct: 382 HGQEFEALYTKYEQQGIGRKTMKAQKLWEAIIESQIETGTPYMLYKDHANSKSNQKNLGT 441
Query: 423 IKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDF 482
IKSSNLC E+I+YTSP E AVCNLASI+LPRYV++ GV FD+
Sbjct: 442 IKSSNLCCEIIEYTSPDEVAVCNLASISLPRYVKD-GV-------------------FDY 481
Query: 483 EKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTE 542
EKL +VT +T NLN+IID N+YP + A+ SN+RHRPIGIG+QGLAD +LL +PF+
Sbjct: 482 EKLHKVTYQITINLNRIIDGNFYPCDEAKNSNMRHRPIGIGIQGLADALMLLKIPFEDER 541
Query: 543 AQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVN-PSDRWDWG 601
A Q N++IFETIY+ ++++S ++A EG Y+++ GSP+S+GI Q DMW PS+R++W
Sbjct: 542 AYQFNQEIFETIYHASMQSSVDLAKVEGHYQSFPGSPLSQGIFQYDMWNEKLPSNRYNWE 601
Query: 602 GLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
LR+ + K G RNSLLVAPMPTASTSQILGNNE FEPYT+NIY+RRVL+GEFV VN HL+
Sbjct: 602 TLREEVKKFGARNSLLVAPMPTASTSQILGNNESFEPYTTNIYTRRVLAGEFVCVNPHLV 661
Query: 662 HDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYI 721
DL + LW+ ++N+++ +GS+Q I IP+++K +YKT+WEI QK L+++A R +I
Sbjct: 662 RDLISLDLWTQEVRNQLVGHNGSIQSISGIPDDIKKLYKTIWEIPQKQLINLARARAPFI 721
Query: 722 DHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPK 781
SQSLNI+M + + KL+S HF+AW GLKTG YYLR+R A DAIKFT+D + K
Sbjct: 722 CQSQSLNIYMGEATYTKLSSAHFYAWQLGLKTGQYYLRTRPARDAIKFTLDVESMM---K 778
Query: 782 VTDDDDAKMAQMVC-SLTNRE 801
TD + M +LT +E
Sbjct: 779 STDSSSSMFDHMTTKNLTAQE 799
>gi|347600972|gb|AEP15458.1| ribonucleoside-diphosphate reductase [Emiliania huxleyi virus 207]
gi|347601397|gb|AEP15882.1| ribonucleoside-diphosphate reductase [Emiliania huxleyi virus 208]
gi|357972865|gb|AET98138.1| ribonucleoside-diphosphate reductase [Emiliania huxleyi virus 201]
Length = 746
Score = 993 bits (2568), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/754 (62%), Positives = 578/754 (76%), Gaps = 22/754 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V+KR+G E+V DKI RLK LSYGL +H DP +VS KV G+Y GVTT QLD LA
Sbjct: 1 MEVIKRNGTSESVQLDKIMKRLKNLSYGL--DHVDPAVVSIKVVQGLYDGVTTVQLDNLA 58
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
ETA +T HPDY+ LAARI VS+LHK T FS ++ +YN+ N ++G +PLIADD+
Sbjct: 59 VETATYLTMTHPDYSKLAARIAVSSLHKMTSNKFSSVMESLYNYVNTKTGQWSPLIADDI 118
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+ I NA LD I Y++D +YD FG+KT+E+SYL ++ G +VERPQHMLMRVA+GIH
Sbjct: 119 IECIRSNAVVLDDVINYEKDLEYDIFGYKTMEKSYLSRINGDIVERPQHMLMRVAIGIHC 178
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D+D+AI+TY ++SQ+ FTHA+PT++NAGT Q+SSCFL+ MKDDSIEGI+DT+K CA+
Sbjct: 179 PDVDAAIETYKLLSQKKFTHATPTMYNAGTKNPQMSSCFLLKMKDDSIEGIFDTIKNCAL 238
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIGVS+HN+RA SYI GT G SNG+VPMLRVF+ TARYVDQGGG+RKGAFA+Y
Sbjct: 239 ISKNAGGIGVSIHNVRAQNSYISGTGGYSNGLVPMLRVFDSTARYVDQGGGRRKGAFAMY 298
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEP HADIFEFL+LRKN GKEE RARDLFYALWV D FM+RV++ WSLFCP+E PGL+
Sbjct: 299 LEPHHADIFEFLELRKNTGKEELRARDLFYALWVSDHFMKRVEAGKNWSLFCPHECPGLS 358
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG ++ LY KYE EGKA+K + AQ LWF I+ SQIETGTPYML+KD+CN+KSNQQ+L
Sbjct: 359 DVWGDDYVALYEKYESEGKARKTIPAQKLWFAIMDSQIETGTPYMLYKDSCNRKSNQQHL 418
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+ SNLCTE+I+YT+P ETAVCNLASIALP +V++ GS F
Sbjct: 419 GTIQQSNLCTEIIEYTAPDETAVCNLASIALPAFVKD-------------GS-------F 458
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D + L +VT T NL+K+ID NYYP+ A RSN+RHRPIG+GVQGLAD F++L M FDS
Sbjct: 459 DHQHLYDVTYHATCNLDKVIDKNYYPIPEAERSNMRHRPIGLGVQGLADVFMMLKMAFDS 518
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
+A+ LNK+IFET+Y+ A+ S +IA +G Y TY GSP+S G Q DMW V PSDRWDW
Sbjct: 519 PDARVLNKEIFETMYFAAMTASCDIAKTKGRYSTYEGSPLSNGKFQFDMWNVTPSDRWDW 578
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR + K G RNSLL APMPTAST+QILG NECFEP+TSN+YSRRVLSGEF VVNK+L
Sbjct: 579 NTLRSNVKKYGARNSLLTAPMPTASTAQILGFNECFEPFTSNLYSRRVLSGEFPVVNKYL 638
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
+ DL++ GLW +KN II +GSVQ IP PE+LK IYKTVWEI +TL+DM+ DRG +
Sbjct: 639 VKDLSDRGLWGDNMKNYIIAANGSVQNIPGFPEDLKPIYKTVWEISMRTLIDMSADRGAF 698
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTG 754
I SQS N+ M QP KLTS+HF+ W GLKTG
Sbjct: 699 ICQSQSFNVFMTQPTSAKLTSMHFYGWKSGLKTG 732
>gi|145497945|ref|XP_001434961.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402089|emb|CAK67564.1| unnamed protein product [Paramecium tetraurelia]
Length = 840
Score = 992 bits (2564), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 472/791 (59%), Positives = 597/791 (75%), Gaps = 33/791 (4%)
Query: 2 YVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAA 61
YV+KRDG ++ + KI RL+ L+ L +H + L+ KV G+Y+G+TT QLD LAA
Sbjct: 23 YVLKRDGGKQNIDIQKIAERLQNLASNL--QHININLIMWKVIQGMYEGITTVQLDNLAA 80
Query: 62 ETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVY 121
ET A M HP Y+ LAARI V+NLHK T +SFSE +++ + ++ G APLIADDVY
Sbjct: 81 ETCAYMNLVHPQYSLLAARIAVNNLHKETSESFSEVATKLHS-FTDKYGRPAPLIADDVY 139
Query: 122 DIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKD 181
IIM+N + +EI YDRD+ YD+FGFKTLERSYLLK K +ERPQ +LMRV++GIHK+
Sbjct: 140 KIIMENKDIIQNEINYDRDYQYDFFGFKTLERSYLLKEGKKPIERPQQLLMRVSIGIHKE 199
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAII 241
D+ SA +TYH+MSQ++FTHA+PTLFN+GTP Q+SSCFL+ M DDSIEGIY+TLK CA+I
Sbjct: 200 DLQSAFQTYHLMSQKYFTHATPTLFNSGTPYPQMSSCFLLDMVDDSIEGIYETLKRCALI 259
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SKSAGGIG+S IR+ SYIRGTNG SNG+VPML+VFNDTARYVDQGGGKRKG+FA+YL
Sbjct: 260 SKSAGGIGLSASKIRSQDSYIRGTNGISNGLVPMLKVFNDTARYVDQGGGKRKGSFAIYL 319
Query: 302 EPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLAD 361
EPWH+DI FL LRKNHG EE RARDLF LW+PDLFM+RV+ + W+L CPNE PGL D
Sbjct: 320 EPWHSDIISFLQLRKNHGIEEQRARDLFLGLWIPDLFMQRVKDDSDWTLMCPNECPGLQD 379
Query: 362 CWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG 421
C+G EF +LYT YE + + ++A+ LW EI+ +QI TG PYML+KD CN KSNQ+NLG
Sbjct: 380 CYGQEFNKLYTDYESKNMGRVTMKARQLWQEIIDAQISTGLPYMLYKDACNSKSNQKNLG 439
Query: 422 TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFD 481
TIKSSNLCTE+IQYTSP E AVCNLASI L + ++E ++ FD
Sbjct: 440 TIKSSNLCTEIIQYTSPDEIAVCNLASINLQKLIKE-------------------DKTFD 480
Query: 482 FEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDST 541
F+KL E+T I+T NLN +ID+N+YPV+ A SN R+RPIGIGVQG AD + +PFDS
Sbjct: 481 FDKLLEITKIITINLNIVIDLNFYPVKQAEYSNKRNRPIGIGVQGFADALQRMKIPFDSE 540
Query: 542 EAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWG 601
+A +LN IFETIYY A +TS E+A + GPYET+ GSP S+GILQ DMWGV+P +DW
Sbjct: 541 DALELNAKIFETIYYGACQTSLELAQKLGPYETFTGSPASQGILQFDMWGVSPK-LYDWN 599
Query: 602 GLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
L+ I+K+G+RNSLL+APMPTASTSQIL NNE FEPYT+NIY+RRVL+GEFV +N HL+
Sbjct: 600 TLKQNIAKHGMRNSLLIAPMPTASTSQILQNNESFEPYTTNIYTRRVLAGEFVCINPHLV 659
Query: 662 HDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYI 721
DL E+ LW+P IKNK+I ++GSVQ I +IP +K++YKTVWEI QK ++++A R +I
Sbjct: 660 DDLIELNLWTPQIKNKLIMNNGSVQNIEEIPNNIKSLYKTVWEISQKAILNLATSRAPFI 719
Query: 722 DHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKT---------GMYYLRSRAAADAIKFTVD 772
D SQSLNIHM +P K+TS+HF+A +G+K GMYYLR+R AAD IKFTVD
Sbjct: 720 DQSQSLNIHMAEPTMSKVTSMHFYAGRKGVKNRYILYITIKGMYYLRTRPAADPIKFTVD 779
Query: 773 T-SVLKENPKV 782
++LKE ++
Sbjct: 780 VEALLKEGGQI 790
>gi|154340341|ref|XP_001566127.1| putative ribonucleoside-diphosphate reductase large chain
[Leishmania braziliensis MHOM/BR/75/M2904]
gi|134063446|emb|CAM39626.1| putative ribonucleoside-diphosphate reductase large chain
[Leishmania braziliensis MHOM/BR/75/M2904]
Length = 799
Score = 991 bits (2563), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/813 (57%), Positives = 610/813 (75%), Gaps = 28/813 (3%)
Query: 3 VVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAE 62
++KR+G+ + KI R +++ GL +H D ++++ V G+ + +LDEL A+
Sbjct: 8 IIKRNGEAQTYDASKIRRRFERVMEGLDSDHLDVDMLTENVTRGLTDQIRYDKLDELVAQ 67
Query: 63 TAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYD 122
TAA T HPDY + R+ ++LHK T +S ET + +++H ++ APL+ADDV++
Sbjct: 68 TAAYSVTKHPDYGRMGGRLCTTSLHKQTSESLLETFRLLHDHVTVQTHRPAPLVADDVWE 127
Query: 123 IIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQG-----KVVERPQHMLMRVAVG 177
++ ++ L S I Y RD ++++FG+KTLERSYLL+++ ++VERPQ M MRVA+G
Sbjct: 128 VMQQHHKELQSMIDYSRDLNFEFFGYKTLERSYLLRIETGRGEMRIVERPQQMFMRVALG 187
Query: 178 IHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKE 237
IH D+++ +TY++MS +FTHA+PTLFNAGTP+ Q+SSCFLV KDDSI+GIYDTLKE
Sbjct: 188 IHGRDLNNVRETYNLMSMGFFTHATPTLFNAGTPKPQMSSCFLVASKDDSIDGIYDTLKE 247
Query: 238 CAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAF 297
CA+ISK+AGGIG+ VHNIRA GSYI GTNGTSNG+VPMLRVFN+TARYVDQGGGKRKGAF
Sbjct: 248 CAVISKAAGGIGLHVHNIRAAGSYIAGTNGTSNGLVPMLRVFNNTARYVDQGGGKRKGAF 307
Query: 298 AVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAP 357
AVYLEPWHAD+F FL L++N GK++ RARDLFYALW+PDLFM+RV+S G W+L PN P
Sbjct: 308 AVYLEPWHADVFGFLLLKRNTGKDDQRARDLFYALWIPDLFMKRVKSEGRWTLMDPNTCP 367
Query: 358 GLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQ 417
GL+DC G FERLY +YE EG+ K +QAQ +WF IL+SQIETG P++L+KD CN KSNQ
Sbjct: 368 GLSDCHGEAFERLYERYEAEGRGVKTIQAQEVWFAILESQIETGGPFILYKDACNSKSNQ 427
Query: 418 QNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKN 477
+NLGTIK SNLCTE+++YTSP ETAVCNLASIALPR+V +
Sbjct: 428 KNLGTIKCSNLCTEIVEYTSPEETAVCNLASIALPRFV------------------DVEK 469
Query: 478 RYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMP 537
R F+ + L VT +T NLN++ID NYYPVETARRSN+R+RPIG+GVQGLADTFIL+ +P
Sbjct: 470 REFNHQLLYAVTKQITRNLNRVIDRNYYPVETARRSNMRNRPIGLGVQGLADTFILMRLP 529
Query: 538 FDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMW-GVNP-S 595
F S EAQ++N +IFETIY+ A+ +S E+A EGPYET+ GSP S+GILQ DMW P S
Sbjct: 530 FVSAEAQRVNAEIFETIYFAAVESSMELAKEEGPYETFKGSPASEGILQFDMWKNARPNS 589
Query: 596 DRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVV 655
RWDW L++ + + G+RNSLLV+PMPTASTSQILGNNECFEP+TSNIY RRVLSGEF V
Sbjct: 590 GRWDWASLKEKVMQVGIRNSLLVSPMPTASTSQILGNNECFEPFTSNIYVRRVLSGEFPV 649
Query: 656 VNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAV 715
VNK+L+ DL GLW+ ++N+II +GS+ I IP++LK +Y+TVWEI Q+ L+DMA
Sbjct: 650 VNKYLVMDLIARGLWNEQMRNEIISYNGSILNIDGIPDDLKELYRTVWEIPQRKLIDMAR 709
Query: 716 DRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
DRG YID SQSLN+ + P G++TS+ F+ W GLKTG+YYLR++AAADAIKFTVD
Sbjct: 710 DRGQYIDQSQSLNLFLQSPTSGQITSMLFYGWEAGLKTGVYYLRTKAAADAIKFTVDAKR 769
Query: 776 LKENPKVTDDDDAKMAQMVCSLTNREECMACGS 808
LKE + + + ++ ++ EEC+ CGS
Sbjct: 770 LKE---IQERESSQQTMSSHRVSQPEECLNCGS 799
>gi|73852902|ref|YP_294186.1| putative ribonucleoside-diphosphate reductase protein [Emiliania
huxleyi virus 86]
gi|72415618|emb|CAI65855.1| putative ribonucleoside-diphosphate reductase protein [Emiliania
huxleyi virus 86]
Length = 746
Score = 991 bits (2562), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/754 (62%), Positives = 577/754 (76%), Gaps = 22/754 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V+KR+G E+V DKI RLK LSYGL +H DP +VS KV G+Y GVTT QLD LA
Sbjct: 1 MEVIKRNGTSESVQLDKIMKRLKNLSYGL--DHVDPAVVSIKVVQGLYDGVTTVQLDNLA 58
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
ETA +T HPDY+ LAARI VS+LHK T FS + +YN+ N ++G +PLIADD+
Sbjct: 59 VETATYLTMTHPDYSKLAARIAVSSLHKMTSNKFSSVMDSLYNYVNTKTGKWSPLIADDI 118
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+ I NA D I Y++D +YD FG+KT+E+SYL ++ G +VERPQHMLMRVA+GIH
Sbjct: 119 IECIRSNAEVFDDVINYEKDLEYDIFGYKTMEKSYLSRINGDIVERPQHMLMRVAIGIHC 178
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D+D+AI+TY ++S R FTHA+PT++NAGT Q+SSCFL+ MKDDSIEGI+DTLK CA+
Sbjct: 179 PDVDAAIETYKLLSARVFTHATPTMYNAGTRNPQMSSCFLLKMKDDSIEGIFDTLKNCAL 238
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIGVS+HN+RA SYIRGT G SNG+VPMLRVF++TARYVDQGGGKRKGAFA+Y
Sbjct: 239 ISKNAGGIGVSIHNVRAQNSYIRGTGGYSNGLVPMLRVFDNTARYVDQGGGKRKGAFAMY 298
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEP HADIFEFL+LRKN GKEE RARDLFYALWV D FM+RV++ WSLFCP+E PGL+
Sbjct: 299 LEPHHADIFEFLELRKNTGKEELRARDLFYALWVSDHFMKRVEAGKNWSLFCPHECPGLS 358
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG ++ LY KYE EGKA+K + AQ LWF I+ SQIETGTPYML+KD+CN+KSNQQ+L
Sbjct: 359 DVWGDDYVALYEKYESEGKARKTIPAQKLWFAIMDSQIETGTPYMLYKDSCNRKSNQQHL 418
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+ SNLCTE+I+YT+P ETAVCNLASIALP +V K+ F
Sbjct: 419 GTIQQSNLCTEIIEYTAPDETAVCNLASIALPAFV--------------------KDGTF 458
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D + L +VT T NL+K+ID NYYP+ A RSN+RHRPIG+GVQGLAD F++L M FDS
Sbjct: 459 DHQHLYDVTYHATCNLDKVIDKNYYPIPEAERSNMRHRPIGLGVQGLADVFMMLKMAFDS 518
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
+A+ LNK+IFET+Y+ A+ S ++A +G Y TY GSP+S+G Q D+W V PS RW+W
Sbjct: 519 PDARVLNKEIFETMYFAAMTASCDLAKTKGKYSTYEGSPLSQGKFQFDLWNVTPSVRWNW 578
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR + K+G RNSL+ APMPTAST+QILGNNECFEP+TSN+YSRRVLSGEF VVNK+L
Sbjct: 579 DTLRSNVKKHGTRNSLVTAPMPTASTAQILGNNECFEPFTSNLYSRRVLSGEFPVVNKYL 638
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
+ DL++ GLW +KN II +GSVQ IP PE+LK IYKTVWEI +TL+DMA DRG +
Sbjct: 639 VKDLSDRGLWGDSMKNYIIAANGSVQNIPGFPEDLKPIYKTVWEISMRTLIDMAADRGAF 698
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTG 754
I SQS N+ M QP KLTS+HF+ W GLKTG
Sbjct: 699 ICQSQSFNVFMTQPTSAKLTSMHFYGWKSGLKTG 732
>gi|171399|gb|AAA34569.1| ribonucleotide reductase DNA damage-inducible regulatory subunit,
partial [Saccharomyces cerevisiae]
Length = 756
Score = 991 bits (2561), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/777 (60%), Positives = 595/777 (76%), Gaps = 27/777 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG++E V FDKIT+R+ +LSYGL D V V+Q++ +GVY GVTT +LD LA
Sbjct: 1 MYVIKRDGRKEPVQFDKITSRITRLSYGLDPNRIDAVKVTQRIISGVYSGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AET A MTT HPDYA+LAARI +SNLHK T K FS+ I+D+++ N +G AP+I+D++
Sbjct: 61 AETCAYMTTVHPDYATLAARIAISNLHKQTTKQFSKVIEDLHDWINPATGKHAPMISDEI 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+I+M+ L+S I+YDRDF Y YFGFKTLERSYLL++ G+V ERPQH++MRVA+GIH
Sbjct: 121 YNIVME-TRYLNSAIVYDRDFQYTYFGFKTLERSYLLRLNGEVAERPQHLVMRVALGIHG 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI+S +KTY++MS R+FTHASPTLFNAGTP Q+SSCFL+ MKDDSIEGIYDTLKECA+
Sbjct: 180 SDIESVLKTYNLMSLRYFTHASPTLFNAGTPLPQMSSCFLIAMKDDSIEGIYDTLKECAM 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AG + ++NIR+TGSYI GTNGTSNG++PM+RVFN+TARYV R +
Sbjct: 240 ISKTAGVLS-HINNIRSTGSYIAGTNGTSNGLIPMIRVFNNTARYV-----TRVVTRDLV 293
Query: 301 LEP--WHADI---FEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNE 355
L P W + D+RK HGKEE RARDLF ALW+PDLFM+RVQ +G W+LF P+
Sbjct: 294 LSPFSWSHGMQISSTKFDIRKTHGKEEIRARDLFPALWIPDLFMKRVQEDGPWTLFSPSA 353
Query: 356 APGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKS 415
APGL D WG EFE LYT+YE+EG+ K ++AQ LW+ IL++Q ETGTP+M++KD CN+K+
Sbjct: 354 APGLDDVWGDEFEELYTRYEREGRGK-TIKAQKLWYAILQAQTETGTPFMVYKDACNRKT 412
Query: 416 NQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGS 475
NQQNLGTIKSSNLC E+++Y+SP ETAVCNLASIALP +V S
Sbjct: 413 NQQNLGTIKSSNLCCEIVEYSSPDETAVCNLASIALPAFVEV--------------SEDG 458
Query: 476 KNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLG 535
K ++FE+L E+ ++T NLN++ID NYYPV AR SN++HRPI +GVQGLADT+++L
Sbjct: 459 KTASYNFERLHEIAKVITHNLNRVIDRNYYPVPEARNSNMKHRPIALGVQGLADTYMMLR 518
Query: 536 MPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPS 595
+PF+S EAQ LNK IFETIY+ L S E+A +EG Y T+ GSP SKGILQ DMW P
Sbjct: 519 LPFESEEAQTLNKQIFETIYHATLEASCELAQKEGKYSTFEGSPASKGILQFDMWNAKPF 578
Query: 596 DRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVV 655
WDW LR I K+G+RNSL +APMPTASTSQILG NECFEP TSN+YSRRVLSGEF V
Sbjct: 579 GMWDWETLRKDIVKHGLRNSLTMAPMPTASTSQILGYNECFEPVTSNMYSRRVLSGEFQV 638
Query: 656 VNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAV 715
VN +LL DL ++G+W +K +I +GS+Q +P +P+ELK +YKTVWEI QKT+++MA
Sbjct: 639 VNPYLLRDLVDLGIWDDSMKQYLITQNGSIQGLPNVPQELKELYKTVWEISQKTIINMAA 698
Query: 716 DRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
DR YID S SLN+ + P+ GK+TS+HF+ W +GLKTGMYYLR++AA+ AI+FT+D
Sbjct: 699 DRAIYIDQSHSLNLFLQAPSMGKITSMHFYGWKKGLKTGMYYLRTQAASAAIQFTID 755
>gi|187903102|ref|YP_001883393.1| ribonucleoside diphosphate reductase large subunit, rr1 [Musca
domestica salivary gland hypertrophy virus]
gi|187384751|gb|ACD03524.1| ribonucleoside diphosphate reductase large subunit, rr1 [Musca
domestica salivary gland hypertrophy virus]
Length = 785
Score = 989 bits (2557), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/810 (57%), Positives = 611/810 (75%), Gaps = 34/810 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
++V KR G + + FDKI R++ L Y L+ ++ P + KV G+Y GVTT++LD LA
Sbjct: 8 LFVTKRGGFVQDIVFDKIRKRIESLCYNLNADYVHPSTIVVKVVAGLYPGVTTAELDTLA 67
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA+M T HPDY LAARI +SN+HK T SF+ T+K++Y A LI+
Sbjct: 68 AETAASMMTLHPDYGVLAARIAISNMHKQTDDSFARTMKELY---------AAGLISMFH 118
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
YD++ ++ LD I++ DF+Y YFG KTLERSYL+ ++ ++VERPQ++LMR A+GIH
Sbjct: 119 YDVVCRHGRTLDEAIVHANDFNYSYFGIKTLERSYLMHIKDRLVERPQYLLMRCALGIHG 178
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
++ID+ I+TY+ MS+ +FTHA+PTLF+A TP+ QLSSC+L+ +K DSI+GI+ T+ +CA
Sbjct: 179 ENIDAVIETYNYMSRHYFTHATPTLFSAATPKPQLSSCYLLTIKGDSIDGIFRTVADCAA 238
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG++VH+IRA GS I GTNG SNG+VPMLRVFN+ ARYVDQGGGKR G+FA+Y
Sbjct: 239 ISKTAGGIGLNVHDIRARGSPIDGTNGKSNGLVPMLRVFNNVARYVDQGGGKRMGSFAIY 298
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIFEFLDLRKNHG EE RARDLFYALW+PDLFM RV+ +G WSL CP++ P L+
Sbjct: 299 LEPWHADIFEFLDLRKNHGIEEQRARDLFYALWIPDLFMRRVEQDGDWSLMCPHKCPCLS 358
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG FE LY YE++G+A + V+A+ LW I++SQ+ETGTPYM++KD CN+KSNQQNL
Sbjct: 359 EVWGESFEHLYEHYERKGRAVRTVKARALWHAIIESQVETGTPYMMYKDACNRKSNQQNL 418
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+ SNLCTE+++YT+P E AVCNLAS+ALP++V V + ++F
Sbjct: 419 GTIRCSNLCTEIVEYTAPDEIAVCNLASLALPKFV--------------VSGTPDRPKHF 464
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DFE+L + +VT NLN+IID+NYYPV ARRSNLRHRPIGIGVQGLADTF+L+GMP++S
Sbjct: 465 DFEQLRRIVHVVTRNLNRIIDINYYPVPEARRSNLRHRPIGIGVQGLADTFVLMGMPYES 524
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDR--W 598
EA++LN+ IFETIY+ AL TS ++A EG Y+++ GSP S G LQ DMW V+ D+ W
Sbjct: 525 DEARELNRRIFETIYFAALETSCQLAKEEGVYDSFLGSPASIGTLQQDMWPVDVDDKPMW 584
Query: 599 DWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNK 658
+W LR I NG+RNSLLVAPMPTAST+QILGN E FEP TSNIY RRVLSGEF V+N+
Sbjct: 585 NWDELRHNIEMNGLRNSLLVAPMPTASTAQILGNTESFEPITSNIYVRRVLSGEFQVINR 644
Query: 659 HLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRG 718
HL+ L ++GLWS ++N+II GSVQ I +IP E++ +YKTVWEI + ++DMA DRG
Sbjct: 645 HLVQHLIDLGLWSESMRNRIIARRGSVQDIEEIPIEVRRLYKTVWEISGRRIIDMAADRG 704
Query: 719 CYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE 778
YID SQSLN+H+ +PN+ KL+S+HF+AW GLKTGMYYLR++AAA+AI+FTVD+S
Sbjct: 705 RYIDQSQSLNMHVAEPNYAKLSSMHFYAWRAGLKTGMYYLRTKAAANAIQFTVDSSSGVS 764
Query: 779 NPKVTDDDDAKMAQMVCSLTNREECMACGS 808
+ + D C+ EC++C S
Sbjct: 765 SSASSTQDGP-----ACT----RECLSCSS 785
>gi|283481642|emb|CAZ69758.1| putative ribonucleoside-diphosphate reductase protein [Emiliania
huxleyi virus 99B1]
Length = 746
Score = 987 bits (2552), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/754 (61%), Positives = 577/754 (76%), Gaps = 22/754 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V+KR+G E+V DKI RLK LSYGL +H DP +VS KV G+Y GVTT QLD LA
Sbjct: 1 MEVIKRNGTSESVQLDKIMKRLKNLSYGL--DHVDPAVVSIKVVQGLYDGVTTVQLDNLA 58
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
ETA +T HPDY+ LAARI VS+LHK T FS + +YN+ N ++G +PLIADD+
Sbjct: 59 VETATYLTMTHPDYSKLAARIAVSSLHKMTSNKFSSVMDSLYNYVNTKTGQWSPLIADDI 118
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+ I NA D I Y++D +YD FG+KT+E+SYL ++ G +VERPQHMLMRVA+GIH
Sbjct: 119 IECIRSNADVFDDVINYEKDLEYDIFGYKTMEKSYLSRINGDIVERPQHMLMRVAIGIHC 178
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D+D+AI+TY ++SQ+ FTHA+PT++NAGT Q+SSCFL+ MKDDSIEGI+DT+K CA+
Sbjct: 179 PDVDAAIETYKLLSQKKFTHATPTMYNAGTKNPQMSSCFLLKMKDDSIEGIFDTIKNCAL 238
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIGVS+HN+RA SYI GT G SNG+VPMLRVF+ TARYVDQGGG+RKGAFA+Y
Sbjct: 239 ISKNAGGIGVSIHNVRAQNSYISGTGGYSNGLVPMLRVFDSTARYVDQGGGRRKGAFAMY 298
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEP HADIFEFL+LRKN GKEE RARDLFYALWV D FM+RV++ WSLFCP+E PGL+
Sbjct: 299 LEPHHADIFEFLELRKNTGKEELRARDLFYALWVSDHFMKRVEAGKNWSLFCPHECPGLS 358
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG ++ LY KYE EGKA+K + AQ LWF I+ SQIETGTPYML+KD+CN+KSNQQ+L
Sbjct: 359 DVWGDDYVALYEKYESEGKARKTIPAQKLWFAIMDSQIETGTPYMLYKDSCNRKSNQQHL 418
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+ SNLCTE+I+YT+P ETAVCNLASIALP +V++ GS F
Sbjct: 419 GTIQQSNLCTEIIEYTAPDETAVCNLASIALPSFVKD-------------GS-------F 458
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D + L +VT T NL+K+ID NYYP+ A RSN+RHRPIG+GVQGLAD F++L + FDS
Sbjct: 459 DHQHLYDVTYHATCNLDKVIDKNYYPIPEAERSNMRHRPIGLGVQGLADVFMMLKISFDS 518
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
+A+ LNK+IFET+Y+ A+ S ++A +G Y TY GSP+S G Q DMW V PS RW+W
Sbjct: 519 PDARVLNKEIFETMYFAAMTASCDLAKTKGKYSTYEGSPLSNGKFQFDMWNVTPSVRWNW 578
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR + K+G RNSL+ APMPTAST+QILGNNECFEP+TSN+YSRRVLSGEF VVNK+L
Sbjct: 579 DTLRSNVKKHGTRNSLVTAPMPTASTAQILGNNECFEPFTSNLYSRRVLSGEFPVVNKYL 638
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
+ DL++ GLW +KN II +GSVQ IP PE+LK IYKTVWEI +TL+DMA DRG +
Sbjct: 639 VKDLSDRGLWGDSMKNYIIAANGSVQNIPGFPEDLKPIYKTVWEISMRTLIDMAADRGAF 698
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTG 754
I SQS N+ M QP KLTS+HF+ W GLKTG
Sbjct: 699 ICQSQSFNVFMTQPTSAKLTSMHFYGWKSGLKTG 732
>gi|146091813|ref|XP_001470128.1| putative ribonucleoside-diphosphate reductase large chain
[Leishmania infantum JPCM5]
gi|134084922|emb|CAM69320.1| putative ribonucleoside-diphosphate reductase large chain
[Leishmania infantum JPCM5]
Length = 799
Score = 985 bits (2546), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/813 (57%), Positives = 609/813 (74%), Gaps = 28/813 (3%)
Query: 3 VVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAE 62
++KR+G+ + KI R +++ GL +H D ++++ V G+ + +LDEL A+
Sbjct: 8 IIKRNGEAQPYDACKIRRRFERVMEGLDRDHLDVDMLTENVTRGLTDQIRYDKLDELVAQ 67
Query: 63 TAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYD 122
TAA T HPDY + R+ ++LHK T +S ET + +++H ++ APLIADDV++
Sbjct: 68 TAAYSVTKHPDYGRMGGRLCTTSLHKQTNESLLETFRLLHDHVTVQTNRPAPLIADDVWE 127
Query: 123 IIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQG-----KVVERPQHMLMRVAVG 177
++ ++ L S I Y RD ++++FG+KTLERSYLL+++ ++VERPQ M MRVA+G
Sbjct: 128 VMQQHHKELQSMIDYSRDLNFEFFGYKTLERSYLLRIETGRGEMRIVERPQQMFMRVALG 187
Query: 178 IHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKE 237
IH D+ + +TY +MS+ +FTHA+PTLFNAGTP+ Q+SSCFLV K+DSI+GIYDTLKE
Sbjct: 188 IHGADLKNVRETYDLMSKGFFTHATPTLFNAGTPKPQMSSCFLVASKEDSIDGIYDTLKE 247
Query: 238 CAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAF 297
CA+ISK+AGGIG+ VHNIRA GSYI GTNGTSNG+VPMLRVFN+TARYVDQGGGKRKGAF
Sbjct: 248 CAVISKAAGGIGLHVHNIRAAGSYIAGTNGTSNGLVPMLRVFNNTARYVDQGGGKRKGAF 307
Query: 298 AVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAP 357
AVYLEPWHAD+F FL L++N GK++ RARDLFYALW+PDLFM RV+S G W+L PN P
Sbjct: 308 AVYLEPWHADVFGFLLLKRNTGKDDQRARDLFYALWIPDLFMRRVKSEGKWTLMDPNTCP 367
Query: 358 GLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQ 417
GL+DC+G EFERLY +YE EG+ K +QAQ +WF IL+SQIETG P++L+KD CN KSNQ
Sbjct: 368 GLSDCYGEEFERLYERYESEGRGVKTIQAQEVWFAILESQIETGGPFILYKDACNSKSNQ 427
Query: 418 QNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKN 477
+NLGTIK SNLCTE+++YTSP ETAVCNLASIALPR+V +
Sbjct: 428 KNLGTIKCSNLCTEIVEYTSPQETAVCNLASIALPRFV------------------DVEK 469
Query: 478 RYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMP 537
R F+ + L VT +T NLN++ID NYYPVETARRSN+R+RPIG+GVQGLAD FIL+ +P
Sbjct: 470 REFNHQLLYTVTKQITRNLNRVIDRNYYPVETARRSNMRNRPIGLGVQGLADAFILMRLP 529
Query: 538 FDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMW-GVNP-S 595
F S EAQ++N +IFETIY+ A+ +S E+A +GPYET+ GSP S+GILQ DMW P S
Sbjct: 530 FVSAEAQRVNAEIFETIYFAAVESSMELAKEDGPYETFTGSPASEGILQFDMWKNARPNS 589
Query: 596 DRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVV 655
RWDW L++ + + G+RNSLLVAPMPTASTSQILGNNECFEP+TSNIY RRVLSGEF V
Sbjct: 590 GRWDWASLKEKVMQVGMRNSLLVAPMPTASTSQILGNNECFEPFTSNIYVRRVLSGEFPV 649
Query: 656 VNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAV 715
VNK+L+ DL GLW+ ++N+II +GS+ I +P++L+ +Y+TVWEI Q+ L+DMA
Sbjct: 650 VNKYLVMDLIARGLWNESMRNEIISYNGSILTINGMPDDLRELYRTVWEIPQRKLIDMAR 709
Query: 716 DRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
DRG YID SQSLN+ + P G++TS+ F+ W GLKTG+YYLR++AAADAIKFTVD
Sbjct: 710 DRGQYIDQSQSLNLFLQSPTSGQITSMLFYCWEAGLKTGVYYLRTKAAADAIKFTVDAKR 769
Query: 776 LKENPKVTDDDDAKMAQMVCSLTNREECMACGS 808
+KE + + ++++ + EEC+ CGS
Sbjct: 770 MKE---IQERENSQQTMSSHRASQPEECLNCGS 799
>gi|398018021|ref|XP_003862197.1| ribonucleoside-diphosphate reductase large chain, putative
[Leishmania donovani]
gi|322500426|emb|CBZ35503.1| ribonucleoside-diphosphate reductase large chain, putative
[Leishmania donovani]
Length = 799
Score = 984 bits (2545), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/813 (57%), Positives = 609/813 (74%), Gaps = 28/813 (3%)
Query: 3 VVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAE 62
++KR+G+ + KI R +++ GL +H D ++++ V G+ + +LDEL A+
Sbjct: 8 IIKRNGEAQPYDACKIRRRFERVMEGLDRDHLDVDMLTENVTRGLTDQIRYDKLDELVAQ 67
Query: 63 TAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYD 122
TAA T HPDY + R+ ++LHK T +S ET + +++H ++ APLIADDV++
Sbjct: 68 TAAYSVTKHPDYGRMGGRLCTTSLHKQTNESLLETFRLLHDHVTVQTNRPAPLIADDVWE 127
Query: 123 IIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQG-----KVVERPQHMLMRVAVG 177
++ ++ L S I Y RD ++++FG+KTLERSYLL+++ ++VERPQ M MRVA+G
Sbjct: 128 VMQQHHKELQSMIDYSRDLNFEFFGYKTLERSYLLRIETGRGEMRIVERPQQMFMRVALG 187
Query: 178 IHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKE 237
IH D+ + +TY +MS+ +FTHA+PTLFNAGTP+ Q+SSCFLV K+DSI+GIYDTLKE
Sbjct: 188 IHGADLKNVRETYDLMSKGFFTHATPTLFNAGTPKPQMSSCFLVASKEDSIDGIYDTLKE 247
Query: 238 CAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAF 297
CA+ISK+AGGIG+ VHNIRA GSYI GTNGTSNG+VPMLRVFN+TARYVDQGGGKRKGAF
Sbjct: 248 CAVISKAAGGIGLHVHNIRAAGSYIAGTNGTSNGLVPMLRVFNNTARYVDQGGGKRKGAF 307
Query: 298 AVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAP 357
AVYLEPWHAD+F FL L++N GK++ RARDLFYALW+PDLFM RV+S G W+L PN P
Sbjct: 308 AVYLEPWHADVFGFLLLKRNTGKDDQRARDLFYALWIPDLFMRRVKSEGKWTLMDPNTCP 367
Query: 358 GLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQ 417
GL+DC+G EFERLY +YE EG+ K +QAQ +WF IL+SQIETG P++L+KD CN KSNQ
Sbjct: 368 GLSDCYGEEFERLYERYESEGRGVKTIQAQEVWFAILESQIETGGPFVLYKDACNSKSNQ 427
Query: 418 QNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKN 477
+NLGTIK SNLCTE+++YTSP ETAVCNLASIALPR+V +
Sbjct: 428 KNLGTIKCSNLCTEIVEYTSPQETAVCNLASIALPRFV------------------DVEK 469
Query: 478 RYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMP 537
R F+ + L VT +T NLN++ID NYYPVETARRSN+R+RPIG+GVQGLAD FIL+ +P
Sbjct: 470 REFNHQLLYTVTKQITRNLNRVIDRNYYPVETARRSNMRNRPIGLGVQGLADAFILMRLP 529
Query: 538 FDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMW-GVNP-S 595
F S EAQ++N +IFETIY+ A+ +S E+A +GPYET+ GSP S+GILQ DMW P S
Sbjct: 530 FVSAEAQRVNAEIFETIYFAAVESSMELAKEDGPYETFTGSPASEGILQFDMWKNARPNS 589
Query: 596 DRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVV 655
RWDW L++ + + G+RNSLLVAPMPTASTSQILGNNECFEP+TSNIY RRVLSGEF V
Sbjct: 590 GRWDWASLKEKVMQVGMRNSLLVAPMPTASTSQILGNNECFEPFTSNIYVRRVLSGEFPV 649
Query: 656 VNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAV 715
VNK+L+ DL GLW+ ++N+II +GS+ I +P++L+ +Y+TVWEI Q+ L+DMA
Sbjct: 650 VNKYLVMDLIARGLWNESMRNEIISYNGSILTINGMPDDLRELYRTVWEIPQRKLIDMAR 709
Query: 716 DRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
DRG YID SQSLN+ + P G++TS+ F+ W GLKTG+YYLR++AAADAIKFTVD
Sbjct: 710 DRGQYIDQSQSLNLFLQSPTSGQITSMLFYCWEAGLKTGVYYLRTKAAADAIKFTVDAKR 769
Query: 776 LKENPKVTDDDDAKMAQMVCSLTNREECMACGS 808
+KE + + ++++ + EEC+ CGS
Sbjct: 770 MKE---IQERENSQQTMSSHRASQPEECLNCGS 799
>gi|401424884|ref|XP_003876927.1| ribonucleoside-diphosphate reductase large chain,putative
[Leishmania mexicana MHOM/GT/2001/U1103]
gi|322493171|emb|CBZ28456.1| ribonucleoside-diphosphate reductase large chain,putative
[Leishmania mexicana MHOM/GT/2001/U1103]
Length = 799
Score = 983 bits (2542), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/814 (57%), Positives = 605/814 (74%), Gaps = 30/814 (3%)
Query: 3 VVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAE 62
++KR+G+ + KI R +++ GL +H D ++++ V G+ + +LDEL A+
Sbjct: 8 IIKRNGEAQPYDASKIRRRFERVMEGLDRDHLDVDMLTENVTRGLTDQIRYDKLDELVAQ 67
Query: 63 TAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYD 122
TAA T HPDY + R+ ++LHK T S ET + +++H ++ APLIA DV++
Sbjct: 68 TAAYSVTKHPDYGRMGGRLCTTSLHKQTNASLLETFRLLHDHVTVQTNRPAPLIAGDVWE 127
Query: 123 IIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQG-----KVVERPQHMLMRVAVG 177
++ ++ L I Y RD +++FG+KTLERSYLL+++ ++VERPQ M MRVA+G
Sbjct: 128 VMQQHHKELQGMIDYSRDLSFEFFGYKTLERSYLLRIESGRGEMRIVERPQQMFMRVALG 187
Query: 178 IHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKE 237
IH D+ + +TY +MS+ +FTHA+PTLFNAGTP+ Q+SSCFLV K+DSI+GIYDTLKE
Sbjct: 188 IHGTDLKNVRETYDLMSKGFFTHATPTLFNAGTPKPQMSSCFLVASKEDSIDGIYDTLKE 247
Query: 238 CAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAF 297
CA+ISK+AGGIG+ VHNIRA GSYI GTNGTSNG+VPMLRVFN+TARYVDQGGGKRKGAF
Sbjct: 248 CAVISKAAGGIGLHVHNIRAAGSYIAGTNGTSNGLVPMLRVFNNTARYVDQGGGKRKGAF 307
Query: 298 AVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAP 357
AVYLEPWHADIF FL L++N GK++ RARDLFYALW+PDLFM RV+S G W+L PN P
Sbjct: 308 AVYLEPWHADIFGFLLLKRNTGKDDQRARDLFYALWIPDLFMRRVKSEGKWTLMDPNTCP 367
Query: 358 GLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQ 417
GL+DC+G EFERLY +YE EG+ K +QAQ +WF IL+SQIETG P++L+KD CN KSNQ
Sbjct: 368 GLSDCYGEEFERLYERYESEGRGVKTIQAQEVWFAILESQIETGGPFILYKDACNSKSNQ 427
Query: 418 QNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKN 477
+NLGTIK SNLCTE+++YTSP ETAVCNLASIALPR+V +
Sbjct: 428 KNLGTIKCSNLCTEIVEYTSPQETAVCNLASIALPRFV------------------DVEK 469
Query: 478 RYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMP 537
R F+ + L VT +T NLN++ID NYYPVETAR SN+R+RPIG+GVQGLAD FIL+ +P
Sbjct: 470 REFNHQLLYTVTKQITRNLNRVIDRNYYPVETARHSNMRNRPIGLGVQGLADAFILMRLP 529
Query: 538 FDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP--- 594
F S EAQ++N +IFETIY+ A+ +S E+A EGPYET+ GSP S+GILQ DMW NP
Sbjct: 530 FVSAEAQRVNAEIFETIYFAAVESSMELAKEEGPYETFKGSPASEGILQFDMWK-NPRPN 588
Query: 595 SDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFV 654
S RWDW L++ + + G+RNSLLVAPMPTASTSQILGNNECFEP+TSNIY RRVLSGEF
Sbjct: 589 SGRWDWASLKEKVMQVGLRNSLLVAPMPTASTSQILGNNECFEPFTSNIYVRRVLSGEFP 648
Query: 655 VVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMA 714
VVNK+L+ DL GLW+ ++N+II +GS+ I IP++L+ +Y+TVWEI Q+ L+DMA
Sbjct: 649 VVNKYLVMDLIARGLWNESMRNEIISYNGSILTINGIPDDLRELYRTVWEIPQRKLIDMA 708
Query: 715 VDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTS 774
DRG YID SQSLN+ + P G++TS+ F+ W GLKTG+YYLR++AAADAIKFTVD
Sbjct: 709 RDRGQYIDQSQSLNLFLQSPTSGQITSMLFYCWEAGLKTGLYYLRTKAAADAIKFTVDAK 768
Query: 775 VLKENPKVTDDDDAKMAQMVCSLTNREECMACGS 808
+KE + + ++++ + EEC+ CGS
Sbjct: 769 RMKE---IQERENSQQTMSSRRASQPEECLNCGS 799
>gi|157871642|ref|XP_001684370.1| putative ribonucleoside-diphosphate reductase large chain
[Leishmania major strain Friedlin]
gi|68127439|emb|CAJ05210.1| putative ribonucleoside-diphosphate reductase large chain
[Leishmania major strain Friedlin]
Length = 799
Score = 983 bits (2541), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 463/813 (56%), Positives = 607/813 (74%), Gaps = 28/813 (3%)
Query: 3 VVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAE 62
++KR+G+ + KI R +++ GL +H D ++++ V G+ + +LDEL A+
Sbjct: 8 IIKRNGEAQPYDASKIRRRFERVMEGLDRDHLDVDMLTENVTRGLTDQIRYDKLDELVAQ 67
Query: 63 TAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYD 122
TAA T HPDY + R+ ++LHK T +S ET + +++H ++ APLIADDV++
Sbjct: 68 TAAYSVTKHPDYGRMGGRLCTTSLHKQTNESLLETFRLLHSHVTVQTNRPAPLIADDVWE 127
Query: 123 IIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQG-----KVVERPQHMLMRVAVG 177
++ ++ A L I Y RD ++++FG+KTLERSYLL+++ ++VERPQ M MRVA+G
Sbjct: 128 VMKQHHAELQGMIDYSRDLNFEFFGYKTLERSYLLRIETGRGEMRIVERPQQMFMRVALG 187
Query: 178 IHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKE 237
IH D+ + +TY +MS+ +FTHA+PTLFNAGTP+ Q+SSCFLV K+DSI+GIYDTLKE
Sbjct: 188 IHGADLKNVRETYDLMSKGFFTHATPTLFNAGTPKPQMSSCFLVASKEDSIDGIYDTLKE 247
Query: 238 CAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAF 297
CA+ISK+AGGIG+ VHNIRA GSYI GTNGTSNG+VPMLRVFN+TARYVDQGGGKRKGAF
Sbjct: 248 CAVISKAAGGIGLHVHNIRAAGSYIAGTNGTSNGLVPMLRVFNNTARYVDQGGGKRKGAF 307
Query: 298 AVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAP 357
AVYLEPWHAD+F FL L++N GK++ RARDLFYALW+PDLFM RV+S G W+L PN P
Sbjct: 308 AVYLEPWHADVFGFLLLKRNTGKDDQRARDLFYALWIPDLFMRRVKSEGKWTLMDPNTCP 367
Query: 358 GLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQ 417
GL+DC+G EFERLY +YE EG+ K +QAQ +WF IL+SQIETG P++L+KD CN KSNQ
Sbjct: 368 GLSDCYGEEFERLYERYESEGRGVKTIQAQEVWFAILESQIETGGPFILYKDACNSKSNQ 427
Query: 418 QNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKN 477
+NLGTIK SNLCTE+++YTS ETAVCNLASIALPR+V +
Sbjct: 428 KNLGTIKCSNLCTEIVEYTSSQETAVCNLASIALPRFVE------------------VEK 469
Query: 478 RYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMP 537
R + + L VT +T NLN++ID NYYPVETARRSN+R+RPIG+GVQGLAD FIL+ +P
Sbjct: 470 RELNHQLLYTVTKQITRNLNRVIDRNYYPVETARRSNMRNRPIGLGVQGLADAFILMRLP 529
Query: 538 FDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMW-GVNP-S 595
F S EAQ++N +IFETIY+ A+ +S E+A EGPYET+ GSP S+GILQ DMW P S
Sbjct: 530 FVSAEAQRVNAEIFETIYFAAVESSMELAKEEGPYETFAGSPASEGILQFDMWKNARPNS 589
Query: 596 DRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVV 655
RWDW L++ + + G+RNSLLVAPMPTASTSQILGNNECFEP+TSNIY RRVLSGEF V
Sbjct: 590 GRWDWASLKEKVMQVGMRNSLLVAPMPTASTSQILGNNECFEPFTSNIYVRRVLSGEFPV 649
Query: 656 VNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAV 715
VNK+L+ DL GLW+ ++N+II +GS+ I +P++L+ +Y+TVWEI Q+ L+DMA
Sbjct: 650 VNKYLVMDLIARGLWNESMRNEIISYNGSILAINGMPDDLRELYRTVWEIPQRKLIDMAR 709
Query: 716 DRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
DRG YID SQSLN+ + P G++TS+ F++W GLKTG+YYLR++AAADAIKFTVD
Sbjct: 710 DRGQYIDQSQSLNLFLQSPTSGQITSMLFYSWEAGLKTGVYYLRTKAAADAIKFTVDAKR 769
Query: 776 LKENPKVTDDDDAKMAQMVCSLTNREECMACGS 808
+KE + + + ++ + EEC+ CGS
Sbjct: 770 MKE---IQERETSQQTMSSHRASQPEECLNCGS 799
>gi|340059001|emb|CCC53372.1| putative ribonucleoside-diphosphate reductase large chain
[Trypanosoma vivax Y486]
Length = 799
Score = 980 bits (2534), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 482/824 (58%), Positives = 594/824 (72%), Gaps = 41/824 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V+KR+G E ++ RL+ + G+ + ++ + V G Y + T+ LD L
Sbjct: 1 MNVIKRNGSIEPFSRMELMERLEAIGEGIDRNYVSFEMIVETVAAGAYDNIQTTVLDTLL 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA T HP Y L RI V+ LH+ T E MYNH + S APLI+D+
Sbjct: 61 AETAAYAVTKHPHYGLLGGRISVTALHRITHSDVLEAFGVMYNHLSHTSREHAPLISDET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKV-----QGKVVERPQHMLMRVA 175
+ II K + L+ I Y RD +Y+YFG+KTLERSYLL+ +V+ERPQ M++RVA
Sbjct: 121 WGIIKKRSKELNEIIDYKRDLNYEYFGYKTLERSYLLRADRGIGNTEVIERPQQMILRVA 180
Query: 176 VGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTL 235
+GIH DDI+ +TY +MS +FTHASPTLFNAGTPR Q+SSCFL+ M+DDSIEGIYDTL
Sbjct: 181 IGIHGDDIEHIKETYDLMSLGFFTHASPTLFNAGTPRPQMSSCFLLAMRDDSIEGIYDTL 240
Query: 236 KECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG 295
K+CAIISK+AGGIG+ VHNIR+TGSYI+GTNGTSNG+VPMLRV+N+TARYVDQGGGKRKG
Sbjct: 241 KQCAIISKAAGGIGIHVHNIRSTGSYIKGTNGTSNGLVPMLRVWNNTARYVDQGGGKRKG 300
Query: 296 AFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNE 355
AFA+YLEPWHADIF+F+ L++N GKEEHRARDLFY LW+PDLFM+RV+ W+L P
Sbjct: 301 AFAIYLEPWHADIFKFISLKRNTGKEEHRARDLFYGLWIPDLFMKRVEEGKKWTLMDPKT 360
Query: 356 APGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKS 415
APGL+DC+G EFER Y KYEKE + V AQ+LW IL+SQIETG P+ML+KD CN+KS
Sbjct: 361 APGLSDCYGEEFERKYEKYEKENRGTDSVAAQDLWSAILQSQIETGGPFMLYKDACNRKS 420
Query: 416 NQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGS 475
NQ+NLGTIK SNLCTE+IQ+TS E AVCNLASIALPR+V
Sbjct: 421 NQKNLGTIKCSNLCTEIIQFTSKDEVAVCNLASIALPRFV-------------------- 460
Query: 476 KNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLG 535
KN FD +L VT +VT NLNK+ID N YPV A SN+RHRPIGIGVQGLADTF L
Sbjct: 461 KNGTFDHHELHRVTKVVTRNLNKVIDRNTYPVREAEASNMRHRPIGIGVQGLADTFACLR 520
Query: 536 MPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMW----- 590
PF S +A++LNK+IFETIYY A+ S E+A G YE++ GSP S+G+LQPD+W
Sbjct: 521 YPFASPDAKKLNKEIFETIYYSAVEASVELAETHGSYESFAGSPASEGLLQPDLWEKELV 580
Query: 591 --GVNP----SDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY 644
G P S RWDW LR+ + K+G+RNSLLVAPMPTASTSQILGNNEC EP+TSNIY
Sbjct: 581 QKGRKPVLTCSGRWDWTMLRERVMKSGMRNSLLVAPMPTASTSQILGNNECIEPFTSNIY 640
Query: 645 SRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWE 704
RRVLSGEF +VNK+L+ DL + G+W+ ++N+II +GS+Q IP IP++LK +YK VWE
Sbjct: 641 VRRVLSGEFPIVNKYLVIDLIKDGMWNDEMRNQIIAHNGSIQNIPGIPDKLKELYKVVWE 700
Query: 705 IKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAA 764
IKQ+ L+DMAVDRG YID SQSLNI ++ P +LTS+HF+AW GLKTGMYYLRS+ AA
Sbjct: 701 IKQRDLIDMAVDRGHYIDQSQSLNIFLESPTLPQLTSMHFYAWKSGLKTGMYYLRSKPAA 760
Query: 765 DAIKFTVDTSVLKENPKVTDDDDAKMAQMVCSLTNREECMACGS 808
DAIKFT+D LKE D A AQ + T EC+ CG+
Sbjct: 761 DAIKFTIDPKKLKE----MQADSALQAQRHYA-TTEGECLNCGA 799
>gi|71422050|ref|XP_812008.1| ribonucleoside-diphosphate reductase large chain [Trypanosoma cruzi
strain CL Brener]
gi|70876737|gb|EAN90157.1| ribonucleoside-diphosphate reductase large chain, putative
[Trypanosoma cruzi]
Length = 796
Score = 977 bits (2525), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/814 (57%), Positives = 611/814 (75%), Gaps = 29/814 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
+ V KRDG ++ +K+ AR++++S+GL + D ++++ V GV+ ++T +LD+L
Sbjct: 6 LTVRKRDGSLQSFDANKLFARIERVSHGLDPNYVDVKILTEIVVGGVHDEISTVELDKLI 65
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA T HPDY + R+ V+ LHK T S ET ++ H +G APL++D+V
Sbjct: 66 AETAAYSVTKHPDYGLMGGRLCVTALHKTTSASVLETFSILHKHKIHDTGRAAPLLSDEV 125
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKV-----QGKVVERPQHMLMRVA 175
++++ ++ +L + YDRD +++FG+KTLERSYLL+V + ++ ERPQ M +RVA
Sbjct: 126 WEVVQRHHEQLQRMVNYDRDMRFEFFGYKTLERSYLLRVDRGRGEREIAERPQQMFLRVA 185
Query: 176 VGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTL 235
+GIH +D++ +TY MS FTHA+PTLFNAGTP Q+SSCFLV M++DSIEGIYDTL
Sbjct: 186 LGIHGEDMERVKETYDHMSLGDFTHATPTLFNAGTPFPQMSSCFLVAMREDSIEGIYDTL 245
Query: 236 KECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG 295
K+CA+ISKSAGGIGV VHNIR +GSYI GTNG SNG+VPMLRV+N+TARYVDQGGGKRKG
Sbjct: 246 KQCAVISKSAGGIGVHVHNIRCSGSYIAGTNGQSNGLVPMLRVWNNTARYVDQGGGKRKG 305
Query: 296 AFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNE 355
AFA+YLEPWH DIF FL L+KN GKE+HRARDLFYALW+PDLFMERV+S G W+L P+
Sbjct: 306 AFAIYLEPWHGDIFNFLLLKKNTGKEDHRARDLFYALWIPDLFMERVKSGGKWTLMDPHT 365
Query: 356 APGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKS 415
APGL+DC+G +F++LY YE+E + K VQAQ+LWF IL+SQ+ETG P+ML+KD CN+KS
Sbjct: 366 APGLSDCYGDDFKKLYEGYERENRGVKTVQAQSLWFAILESQMETGVPFMLYKDACNRKS 425
Query: 416 NQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGS 475
NQ+N+G IK SNLCTE+I+YTS E AVCNLASIALPR+V +
Sbjct: 426 NQKNVGVIKCSNLCTEIIEYTSRDEVAVCNLASIALPRFVDK------------------ 467
Query: 476 KNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLG 535
+ R +D ++L EVT IVT+NLN++ID N+YPV +RRSN +RPIGIGVQG+ADTFIL+
Sbjct: 468 ERRIYDHQRLYEVTKIVTKNLNRVIDRNHYPVPESRRSNELNRPIGIGVQGMADTFILMR 527
Query: 536 MPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP- 594
+PF EA+ LN+DIFETIYY A+ S E+A EGPY + GSP S+G LQ D+W P
Sbjct: 528 LPFTCQEARTLNEDIFETIYYGAVEASVELAEVEGPYARFAGSPASQGQLQFDLWEQKPR 587
Query: 595 SDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFV 654
S RWDW L+ + K+G+RNSLL+APMPTASTSQILGNNECFEP+TSNIY RRVLSGEF
Sbjct: 588 SGRWDWDALKKRMMKSGMRNSLLLAPMPTASTSQILGNNECFEPFTSNIYVRRVLSGEFP 647
Query: 655 VVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMA 714
VVNK+L+ DL + GLW+ ++N+II +GSVQ I IP +LK +Y+ VWEI+QK L++MA
Sbjct: 648 VVNKYLVMDLIKRGLWNEEMRNQIIAYNGSVQNIRGIPNDLKELYRVVWEIRQKDLIEMA 707
Query: 715 VDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTS 774
VDRG +ID SQSLN+ ++ P +LTS+HF AW RGLKTGMYYLRS+ AADAIKFTVD +
Sbjct: 708 VDRGKFIDQSQSLNLFLENPTSSQLTSMHFFAWERGLKTGMYYLRSKPAADAIKFTVDPN 767
Query: 775 VLKENPKVTDDDDAKMAQMVCSLTNREECMACGS 808
LK + +DD K Q+ + + E+C+ CGS
Sbjct: 768 TLK---GLVKEDDRK--QVSSATPSNEDCLNCGS 796
>gi|407853283|gb|EKG06338.1| hypothetical protein TCSYLVIO_002561 [Trypanosoma cruzi]
Length = 796
Score = 977 bits (2525), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 468/814 (57%), Positives = 611/814 (75%), Gaps = 29/814 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
+ V KRDG ++ +K+ AR++++S+GL + D ++++ V GV+ ++T +LD+L
Sbjct: 6 LTVRKRDGSLQSFDANKLFARIERVSHGLDPNYVDVKILTEIVVGGVHDEISTVELDKLI 65
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA T HPDY + R+ V+ LHK T S ET ++ H +G APL++D+V
Sbjct: 66 AETAAYSVTKHPDYGLMGGRLCVTALHKTTSASVLETFSILHKHKIHDTGRAAPLLSDEV 125
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKV-----QGKVVERPQHMLMRVA 175
++I+ ++ +L + YDRD +++FG+KTLERSYLL+V + ++ ERPQ M +RVA
Sbjct: 126 WEIVQRHHEQLQRMVNYDRDMRFEFFGYKTLERSYLLRVDRGRGEREIAERPQQMFLRVA 185
Query: 176 VGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTL 235
+GIH +D++ +TY MS +FTHA+PTLFNAGTP Q+SSCFLV M++DSIEGIYDTL
Sbjct: 186 LGIHGEDMERVKETYDHMSLGYFTHATPTLFNAGTPFPQMSSCFLVAMREDSIEGIYDTL 245
Query: 236 KECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG 295
K+CA+ISKSAGGIGV VHNIR +GSYI GTNG SNG+VPMLRV+N+TARYVDQGGGKRKG
Sbjct: 246 KQCAVISKSAGGIGVHVHNIRCSGSYIAGTNGQSNGLVPMLRVWNNTARYVDQGGGKRKG 305
Query: 296 AFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNE 355
AFA+YLEPWH DIF FL L+KN GKE+HRARDLFYALW+PDLFMERV+S G W+L P+
Sbjct: 306 AFAIYLEPWHGDIFNFLLLKKNTGKEDHRARDLFYALWIPDLFMERVKSGGKWTLMDPHT 365
Query: 356 APGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKS 415
APGL+DC+G +F++LY YE+E + K VQAQ+LWF IL+ Q+ETG P+ML+KD CN+KS
Sbjct: 366 APGLSDCYGDDFKKLYEGYERENRGVKTVQAQSLWFAILELQMETGVPFMLYKDACNRKS 425
Query: 416 NQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGS 475
NQ+N+G IK SNLCTE+I+YTS E AVCNLASIALPR+V +
Sbjct: 426 NQKNVGVIKCSNLCTEIIEYTSRDEVAVCNLASIALPRFVDK------------------ 467
Query: 476 KNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLG 535
+ + +D ++L EVT IVT+NLN++ID N+YPV +RRSN +RPIGIGVQG+ADTFIL+
Sbjct: 468 ERKIYDHQRLYEVTKIVTKNLNRVIDRNHYPVPESRRSNELNRPIGIGVQGMADTFILMR 527
Query: 536 MPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP- 594
+PF EA+ LN+DIFETIYY A+ S E+A EGPY + GSP S+G LQ D+W P
Sbjct: 528 LPFTCQEARTLNEDIFETIYYGAVEASVELAEVEGPYARFAGSPASQGQLQFDLWEQKPR 587
Query: 595 SDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFV 654
S RWDW L+ + K+G+RNSLL+APMPTASTSQILGNNECFEP+TSNIY RRVLSGEF
Sbjct: 588 SGRWDWDALKKRMMKSGMRNSLLLAPMPTASTSQILGNNECFEPFTSNIYVRRVLSGEFP 647
Query: 655 VVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMA 714
VVNK+L+ DL + GLW+ ++N+II +GSVQ I IP +LK +Y+ VWEI+QK L++MA
Sbjct: 648 VVNKYLVMDLIKRGLWNEEMRNQIIAYNGSVQNIRGIPNDLKELYRVVWEIRQKDLIEMA 707
Query: 715 VDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTS 774
VDRG +ID SQSLN+ ++ P +LTS+HF AW RGLKTGMYYLRS+ AADAIKFTVD +
Sbjct: 708 VDRGKFIDQSQSLNLFLENPTSSQLTSMHFFAWERGLKTGMYYLRSKPAADAIKFTVDPN 767
Query: 775 VLKENPKVTDDDDAKMAQMVCSLTNREECMACGS 808
LK + +DD K Q+ + + E+C+ CGS
Sbjct: 768 TLK---GLVKEDDRK--QVSSATPSNEDCLNCGS 796
>gi|328722843|ref|XP_003247688.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Acyrthosiphon pisum]
Length = 802
Score = 974 bits (2519), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/811 (56%), Positives = 605/811 (74%), Gaps = 23/811 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
++V KRDG+ E V DKIT R+++L GL+++ DP ++ V + G++T Q+D LA
Sbjct: 12 LFVKKRDGRMEEVMMDKITMRIEQLCEGLNMDFIDPPEITLFVIGDICPGISTVQIDNLA 71
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT HPD+A LAARI +SNL+K TK +FS+ I D+YN NER+ + +I+D
Sbjct: 72 AETAAYLTTKHPDFAVLAARIAISNLYKETKNNFSDVIYDLYNMSNERNQRRMKIISDFH 131
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y ++MK+A RL++ I +DRD+ Y YFGFKTLE+SYLLK+ GKVVERPQH+LMRV++GIH
Sbjct: 132 YGVVMKHADRLNNAIKHDRDYTYSYFGFKTLEKSYLLKINGKVVERPQHLLMRVSIGIHG 191
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+AI+TY +MS ++FTHASPT+FNA TPR QLSSCFLV K DS+E T+K CA
Sbjct: 192 EDIDAAIETYDLMSSKYFTHASPTMFNAATPRPQLSSCFLVANKSDSLEDFGKTVKTCAK 251
Query: 241 ISKSAGGIGVSVHNIRATGS-YIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAV 299
IS+S+GGIG+ +HNI A G+ + + S+G+V L+V ND A+YVDQGG KR GA AV
Sbjct: 252 ISQSSGGIGIHLHNISAAGTTWTKYPRHESHGLVEPLKVLNDLAQYVDQGG-KRPGAVAV 310
Query: 300 YLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGL 359
Y+EPWHAD++ + +LRKN G +E + RDLF ALW+PD FM RV++N WSL CP + PGL
Sbjct: 311 YIEPWHADVYTYTELRKNTGNKEEKTRDLFLALWIPDEFMRRVEANQSWSLMCPRKCPGL 370
Query: 360 ADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQN 419
+D WG +F +LY KYE E + + V A+ LWF I+ SQIETG PY+L+KD CN KSNQ+N
Sbjct: 371 SDVWGDDFVKLYKKYEDEKRYNRQVSARELWFRIITSQIETGMPYVLYKDACNSKSNQKN 430
Query: 420 LGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRY 479
LGTIK SNLCTE+IQYTS E AVCNLASIA+ +V+ G
Sbjct: 431 LGTIKCSNLCTEIIQYTSSEEVAVCNLASIAVNMFVKPNG-------------------E 471
Query: 480 FDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFD 539
+DFEKL ++T IVT+NLN++IDVN+YPV A SN RHRP+GIGVQGLAD F+L+ PF
Sbjct: 472 YDFEKLLKITKIVTKNLNRVIDVNFYPVIEAETSNKRHRPVGIGVQGLADLFLLMRFPFG 531
Query: 540 STEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWD 599
S E+++LN IFET+YY AL S E+A + G Y +Y GSP+S+GILQ DMW V P+D WD
Sbjct: 532 SPESRKLNSQIFETLYYGALEASCELAEKYGTYSSYQGSPISQGILQYDMWNVKPTDLWD 591
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L++ I+K+GVRNSLL+APMPTAST+QILGNNE EPYT+N+Y RR LSGEF VVN+H
Sbjct: 592 WDILKEKIAKHGVRNSLLLAPMPTASTAQILGNNESIEPYTTNLYYRRTLSGEFSVVNRH 651
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL+DL ++ LW+ ++N++IY GSVQKI IP+ +K +YKT WE+ QK ++DMA DR
Sbjct: 652 LLNDLIKLNLWNEDMRNELIYYKGSVQKIKSIPDNIKELYKTNWELSQKIILDMAADRAA 711
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN 779
+ID SQSLNIH++QP GK++S+HF+ W +GLKTGMYYLR+R AAD I+FTV+ S L N
Sbjct: 712 FIDQSQSLNIHIEQPTIGKISSVHFYGWKKGLKTGMYYLRTRPAADPIQFTVNKSTLSSN 771
Query: 780 PKV-TDDDDA-KMAQMVCSLTNREECMACGS 808
+ T+ +DA M ++VCSL N++ C CG+
Sbjct: 772 IAIQTEKNDALSMQELVCSLENKDACTMCGA 802
>gi|297837607|ref|XP_002886685.1| hypothetical protein ARALYDRAFT_893641 [Arabidopsis lyrata subsp.
lyrata]
gi|297332526|gb|EFH62944.1| hypothetical protein ARALYDRAFT_893641 [Arabidopsis lyrata subsp.
lyrata]
Length = 688
Score = 974 bits (2519), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/636 (73%), Positives = 533/636 (83%), Gaps = 38/636 (5%)
Query: 134 EIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMM 193
EI+YDRDFDYD+FGFKTLER YLLKV GKVVERPQHMLMRV VGIH +DIDSAIKTYH+M
Sbjct: 81 EIVYDRDFDYDFFGFKTLERLYLLKVHGKVVERPQHMLMRVVVGIHMEDIDSAIKTYHLM 140
Query: 194 SQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVH 253
SQR FTHASPTLFNAGTPR QLSS FL+CM+DDSIE TL++C +I KSAG I VSVH
Sbjct: 141 SQRLFTHASPTLFNAGTPRPQLSSSFLICMRDDSIES---TLQKCDVIRKSAGSISVSVH 197
Query: 254 NIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLD 313
NI+ T NG+VPML V DQGGGK+ G FAVYLEPWHADIFEFL
Sbjct: 198 NIQGT-----------NGVVPMLDV--------DQGGGKKNGPFAVYLEPWHADIFEFLK 238
Query: 314 LRKNHGK-----EEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFE 368
++KNHGK EEH A ALW+PDLFMERV+ +G WSLFCPNEAPGLADCWGTEFE
Sbjct: 239 IQKNHGKVQNSQEEHMA----IALWIPDLFMERVKHDGKWSLFCPNEAPGLADCWGTEFE 294
Query: 369 RLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNL 428
RLYTKYE+EGKAKKV AQ +F+IL SQ+ETG PYMLFKD+CN+KSNQQNLGTIKSS+L
Sbjct: 295 RLYTKYEREGKAKKVFPAQEPFFDILTSQLETGMPYMLFKDSCNRKSNQQNLGTIKSSSL 354
Query: 429 CTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEV 488
CT VI+YTSPTET VCNLASIAL VP++SHPSKL GS SK+RYFD++KLAEV
Sbjct: 355 CTGVIEYTSPTETTVCNLASIAL-------DVPLDSHPSKLAGSLRSKSRYFDYDKLAEV 407
Query: 489 TGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNK 548
T IVT +L++IID NYYPVETA SN+RHRPIGIGVQGLAD FILLGMPFDS EAQ+LNK
Sbjct: 408 TAIVTNDLDRIIDGNYYPVETAETSNMRHRPIGIGVQGLADAFILLGMPFDSPEAQKLNK 467
Query: 549 DIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMIS 608
DIFETIYYHAL+ SSE+AAR YETY GSP+SKGILQPDMW V PS+RWDW LR+MIS
Sbjct: 468 DIFETIYYHALKASSELAARNDAYETYKGSPMSKGILQPDMWNVTPSNRWDWDFLREMIS 527
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMG 668
KNGVRNSLLV+ MPTASTSQILGNNE FEPYTSNIYS R LSGE ++VNKHLLHDLTEMG
Sbjct: 528 KNGVRNSLLVSLMPTASTSQILGNNESFEPYTSNIYSHRGLSGESILVNKHLLHDLTEMG 587
Query: 669 LWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLN 728
LW+P +K KII ++GS++ +P+IP+++KAIY+T WEIKQ+T+VDMAVDRGCYID SQ+LN
Sbjct: 588 LWTPTLKEKIIDENGSIRNVPEIPDDMKAIYRTAWEIKQRTVVDMAVDRGCYIDQSQTLN 647
Query: 729 IHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAA 764
I++++P++ KLTSLHF+ W +GLKTGM+YLRSRA
Sbjct: 648 INLEEPSYQKLTSLHFYTWTKGLKTGMHYLRSRATT 683
Score = 56.2 bits (134), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 30/42 (71%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQK 42
MYVVKRDG E V DKIT RL KLS GLS HCDP L+ +K
Sbjct: 5 MYVVKRDGWLETVDLDKITLRLNKLSNGLSSYHCDPSLLLRK 46
>gi|193669060|ref|XP_001942710.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
isoform 1 [Acyrthosiphon pisum]
gi|328715730|ref|XP_003245707.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
isoform 2 [Acyrthosiphon pisum]
Length = 802
Score = 973 bits (2515), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/811 (56%), Positives = 605/811 (74%), Gaps = 23/811 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
++V KRDG+ E V DKIT R+++L GL+++ DP ++ V + G++T Q+D LA
Sbjct: 12 LFVKKRDGRMEEVMMDKITMRIEQLCEGLNMDFIDPPEITLFVIGDICPGISTVQIDNLA 71
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT HPD+A LAARI +SNL+K TK +FS+ I D+YN NER+ + +I+D
Sbjct: 72 AETAAYLTTKHPDFAVLAARIAISNLYKETKNNFSDVIYDLYNMSNERNQRRMKIISDFH 131
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y ++MK+A RL++ I +DRD+ Y YFGFKTLE+SYLLK+ GKVVERPQH+LMRV++GIH
Sbjct: 132 YGVVMKHADRLNNAIKHDRDYTYSYFGFKTLEKSYLLKINGKVVERPQHLLMRVSIGIHG 191
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+AI+TY +MS ++FTHASPT+FNA TPR QLSSCFLV K DS+E T+K CA
Sbjct: 192 EDIDAAIETYDLMSSKYFTHASPTMFNAATPRPQLSSCFLVANKSDSLEDFGKTVKTCAK 251
Query: 241 ISKSAGGIGVSVHNIRATGS-YIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAV 299
IS+S+GGIG+ +HNI A G+ + + S+G+V L+V ND A+YVDQGG KR GA AV
Sbjct: 252 ISQSSGGIGIHLHNISAAGTTWTKYPRHESHGLVEPLKVLNDLAQYVDQGG-KRPGAVAV 310
Query: 300 YLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGL 359
Y+EPWHAD++ + +LRKN G +E + RDLF ALW+PD FM RV+++ WSL CP + PGL
Sbjct: 311 YIEPWHADVYTYTELRKNTGNKEEKTRDLFLALWIPDEFMRRVEADQSWSLMCPRKCPGL 370
Query: 360 ADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQN 419
+D WG +F +LY KYE E + + V A+ LWF I+ SQIETG PY+L+KD CN KSNQ+N
Sbjct: 371 SDVWGDDFVKLYKKYEDEKRYNRQVSARELWFRIITSQIETGMPYVLYKDACNSKSNQKN 430
Query: 420 LGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRY 479
LGTIK SNLCTE+IQYTS E AVCNLASIA+ +V+ G
Sbjct: 431 LGTIKCSNLCTEIIQYTSSEEVAVCNLASIAVNMFVKPNG-------------------E 471
Query: 480 FDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFD 539
+DFEKL ++T IVT+NLN++IDVN+YPV A SN RHRP+GIGVQGLAD F+L+ PF
Sbjct: 472 YDFEKLLKITKIVTKNLNRVIDVNFYPVIEAETSNKRHRPVGIGVQGLADLFLLMRFPFG 531
Query: 540 STEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWD 599
S E+++LN IFET+YY AL S E+A + G Y +Y GSP+S+GILQ DMW V P+D WD
Sbjct: 532 SPESRKLNSQIFETLYYGALEASCELAEKYGTYSSYQGSPISQGILQYDMWNVKPTDLWD 591
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L++ I+K+GVRNSLL+APMPTAST+QILGNNE EPYT+N+Y RR LSGEF VVN+H
Sbjct: 592 WDILKEKIAKHGVRNSLLLAPMPTASTAQILGNNESIEPYTTNLYYRRTLSGEFSVVNRH 651
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL+DL ++ LW+ ++N++IY GSVQKI IP+ +K +YKT WE+ QK ++DMA DR
Sbjct: 652 LLNDLIKLNLWNEDMRNELIYYKGSVQKIKSIPDNIKELYKTNWELSQKIILDMAADRAA 711
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN 779
+ID SQSLNIH++QP GK++S+HF+ W +GLKTGMYYLR+R AAD I+FTV+ S L N
Sbjct: 712 FIDQSQSLNIHIEQPTIGKISSVHFYGWKKGLKTGMYYLRTRPAADPIQFTVNKSTLSSN 771
Query: 780 PKV-TDDDDA-KMAQMVCSLTNREECMACGS 808
+ T+ +DA M ++VCSL N++ C CG+
Sbjct: 772 IAIQTEKNDALSMQELVCSLENKDACTMCGA 802
>gi|407420213|gb|EKF38496.1| origin recognition complex subunit 1, putative,cell division cycle
6, putative [Trypanosoma cruzi marinkellei]
Length = 796
Score = 971 bits (2511), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/814 (57%), Positives = 608/814 (74%), Gaps = 29/814 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
+ V KRDG ++ K+ AR++++S+GL + D +++ V GV+ ++T +LD+L
Sbjct: 6 LTVRKRDGSLQSFDASKVFARIERVSHGLDPNYVDVKTLTEIVVGGVHDEISTIELDKLI 65
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA T HPDY + R+ V+ LHK T S ET ++ H +G +APL++D+V
Sbjct: 66 AETAAYSVTKHPDYGLMGGRLSVTALHKTTSASVLETFSILHKHKIHDTGREAPLLSDEV 125
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKV-----QGKVVERPQHMLMRVA 175
++++ ++ +L + Y+RD +++FG+KTLERSYLL+V + ++ ERPQ M +RVA
Sbjct: 126 WEVVQRHHEQLQRMVDYNRDMRFEFFGYKTLERSYLLRVDKGRGEREIAERPQLMFLRVA 185
Query: 176 VGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTL 235
+GIH +D++ +TY MS FTHA+PTLFNAGTP Q+SSCFLV M++DSIEGIYDTL
Sbjct: 186 LGIHGEDMERVKETYDHMSLGDFTHATPTLFNAGTPFPQMSSCFLVAMREDSIEGIYDTL 245
Query: 236 KECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG 295
K+CA+ISKSAGGIGV VHNIR +GSYI GTNG SNG+VPMLRV+N+TARYVDQGGGKRKG
Sbjct: 246 KQCAVISKSAGGIGVHVHNIRCSGSYIAGTNGQSNGLVPMLRVWNNTARYVDQGGGKRKG 305
Query: 296 AFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNE 355
AFA+YLEPWH DIF FL L+KN GKE+ RARDLFYALW+PDLFMERV+S G W+L P+
Sbjct: 306 AFAIYLEPWHGDIFNFLLLKKNTGKEDQRARDLFYALWIPDLFMERVKSGGKWTLMDPHT 365
Query: 356 APGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKS 415
APGL+DC+G +F++LY YE+E + K VQAQ+LWF IL+SQ+ETG P+ML+KD CN+KS
Sbjct: 366 APGLSDCYGDDFKKLYEGYERENRGVKTVQAQSLWFAILESQMETGVPFMLYKDACNRKS 425
Query: 416 NQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGS 475
NQ+N+G IK SNLCTE+I+YTS E AVCNLASIALPR+V +
Sbjct: 426 NQKNIGVIKCSNLCTEIIEYTSKDEVAVCNLASIALPRFVDK------------------ 467
Query: 476 KNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLG 535
+ R +D ++L EVT IVT+NLN++ID N+YPV +RRSN +RPIGIGVQG+ADTFIL+
Sbjct: 468 EKRMYDHQRLYEVTKIVTKNLNRVIDRNHYPVPESRRSNELNRPIGIGVQGMADTFILMR 527
Query: 536 MPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP- 594
+PF EA+ LN+DIFETIYY A+ S E+A EGPY + GSP S+G LQ D+W P
Sbjct: 528 LPFTCQEARTLNEDIFETIYYGAVEASVELAEVEGPYARFAGSPASQGQLQFDLWEQKPR 587
Query: 595 SDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFV 654
S RWDW L+ + K+G+RNSLL+APMPTASTSQILGNNECFEP+TSNIY RRVLSGEF
Sbjct: 588 SGRWDWDALKRRVMKSGMRNSLLLAPMPTASTSQILGNNECFEPFTSNIYVRRVLSGEFP 647
Query: 655 VVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMA 714
VVNK+L+ DL + GLW+ ++N+II +GSVQ I IP +LK +Y+ VWEI+QK L++MA
Sbjct: 648 VVNKYLVMDLIKRGLWNEEMRNQIIAYNGSVQNIKGIPNDLKELYRVVWEIRQKDLIEMA 707
Query: 715 VDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTS 774
VDRG +ID SQSLN+ ++ P +LTS+HF AW RGLKTGMYYLRS+ AADAIKFTVD +
Sbjct: 708 VDRGKFIDQSQSLNLFLENPTSSQLTSMHFFAWERGLKTGMYYLRSKPAADAIKFTVDPN 767
Query: 775 VLKENPKVTDDDDAKMAQMVCSLTNREECMACGS 808
LK + +DD K Q + + E+C+ CGS
Sbjct: 768 TLK---GLVKEDDRK--QFSSATPSNEDCLNCGS 796
>gi|193608391|ref|XP_001944671.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Acyrthosiphon pisum]
Length = 802
Score = 971 bits (2509), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/811 (57%), Positives = 602/811 (74%), Gaps = 23/811 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
++V KRDG+ E V DKIT R+++L GL+++ DP ++ V + G+TT Q+D LA
Sbjct: 12 LFVKKRDGRLEEVLMDKITLRIEQLCDGLNMDFIDPPEITLYVIGDLCPGITTVQIDNLA 71
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT HPD+A LAARI +SNL+K TK++FS+ I D+YN NER+ + P+I+D
Sbjct: 72 AETAAYLTTKHPDFAVLAARIAISNLYKETKENFSDVIYDLYNMSNERNQSRMPIISDFH 131
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y I+MK+A RL++ I +DRD+ Y YFGFKTLE+SYLLK+ GKVVERPQH+LMRV++GIH
Sbjct: 132 YGIVMKHADRLNNAIKHDRDYTYSYFGFKTLEKSYLLKIDGKVVERPQHLLMRVSIGIHG 191
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+AI+TY +MS ++FTHASPT+FNA TPR QLSSCFLV K D +E T+K CA
Sbjct: 192 EDIDAAIETYDLMSLKYFTHASPTMFNASTPRPQLSSCFLVANKSDELEDFGKTVKTCAK 251
Query: 241 ISKSAGGIGVSVHNIRATGS-YIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAV 299
IS+SAGGIGV +HN+ A G+ + + S+G+V L+V ND A+Y+DQGG +R GA AV
Sbjct: 252 ISQSAGGIGVHLHNVGAAGTKWTKYPKCESHGLVEPLKVLNDLAQYIDQGG-RRPGAVAV 310
Query: 300 YLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGL 359
Y+EPWHADI+ + +LRKN G +E + RDLF ALW+PD FM RV++N WSL CP + PGL
Sbjct: 311 YIEPWHADIYTYTELRKNTGNKEEKTRDLFLALWIPDEFMRRVEANQSWSLMCPRKCPGL 370
Query: 360 ADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQN 419
+D WG +F +LY KYE E K V A+ LWF I+ SQIETG PYML+KD CN KSNQ+N
Sbjct: 371 SDVWGDDFVKLYKKYEDEKLYNKQVPARELWFRIITSQIETGMPYMLYKDACNAKSNQKN 430
Query: 420 LGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRY 479
LGTIK SNLCTEVIQYTS E AVCNLASIA+ +V+ G
Sbjct: 431 LGTIKCSNLCTEVIQYTSEEEVAVCNLASIAVNMFVKPNG-------------------E 471
Query: 480 FDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFD 539
+DFEKL ++T IVT NLNK+IDVN+YPV A SN RHRPIGIG+QGLAD F L+ PF
Sbjct: 472 YDFEKLLKITKIVTRNLNKVIDVNFYPVIEAETSNKRHRPIGIGIQGLADLFSLMRFPFG 531
Query: 540 STEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWD 599
S E+++LN IFET+YY AL S E+A + G Y +Y GSP+S+GILQ +MW V PS W+
Sbjct: 532 SPESRKLNIQIFETLYYGALEASCELAEKYGTYSSYQGSPISQGILQYEMWNVKPSSLWN 591
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L++ I+K+GVRNSLL+APMPTAST+QILGNNE EPYT+N+Y RR LSGEF V+N+H
Sbjct: 592 WEILKEKIAKHGVRNSLLLAPMPTASTAQILGNNESIEPYTTNLYYRRTLSGEFSVINRH 651
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL+DL ++ LW+ ++NK+I+ GSVQKI IP+ +K +YKT WE+ QK ++DMA DRG
Sbjct: 652 LLNDLIKLNLWNEDMRNKLIFFKGSVQKIKSIPDNIKELYKTNWELSQKIILDMAADRGA 711
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN 779
YID SQSLNIH++QP K++S+HF+ W +GLKTGMYYLR+R AAD I+FTVD S + N
Sbjct: 712 YIDQSQSLNIHIEQPTISKISSVHFYGWKKGLKTGMYYLRTRPAADPIQFTVDKSTVSNN 771
Query: 780 PKV-TDDDDA-KMAQMVCSLTNREECMACGS 808
+ T+ +DA M Q+VCSL N++ C CG+
Sbjct: 772 VAIQTEKNDALNMEQLVCSLENKDACTMCGA 802
>gi|387593978|gb|EIJ89002.1| ribonucleoside-diphosphate reductase large subunit [Nematocida
parisii ERTm3]
Length = 786
Score = 963 bits (2489), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/794 (57%), Positives = 587/794 (73%), Gaps = 27/794 (3%)
Query: 16 DKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYA 75
D + LK ++ GL +++K+ GV +TT +L LAAETAA MTT+HP Y+
Sbjct: 19 DILLEYLKGMASGLDSTFIKVNELAEKITMGVCDDMTTEELGVLAAETAADMTTSHPHYS 78
Query: 76 SLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEI 135
LA RI S L K+T FSE + + N + LK +I++ + DII+KN RLDS I
Sbjct: 79 LLAGRIEASFLQKSTPSKFSEAMMKLSNSIIYGTDLKTEIISEKILDIILKNRERLDSAI 138
Query: 136 IYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQ 195
+RDF++ YFG KTL+RSYLLK ++ERPQ++ MRV+VGIH++DI+S I+TY +MS
Sbjct: 139 KDERDFEFSYFGIKTLKRSYLLKSNNVIIERPQYLWMRVSVGIHENDIESVIQTYELMST 198
Query: 196 RWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNI 255
+ F HA+PTLFN+GT QLSSCFL+ M+ DSI+GIY+TLK+CA+ISK AGGIGV++HNI
Sbjct: 199 KHFIHATPTLFNSGTISPQLSSCFLLAMQSDSIDGIYNTLKQCAVISKHAGGIGVNIHNI 258
Query: 256 RATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLR 315
R TGSYI+GT G SNGI+PMLRVF+ T++YVDQGG KR G+ VY+EPWH DIF+FLDLR
Sbjct: 259 RGTGSYIKGTFGHSNGIIPMLRVFDATSKYVDQGGNKRPGSIVVYIEPWHRDIFDFLDLR 318
Query: 316 KNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYE 375
KN GKEE RAR+LF LWVPDLFM+RV+ +G W+LFCPN A GL + +G EFE LY +YE
Sbjct: 319 KNTGKEEMRARNLFLGLWVPDLFMKRVEEDGDWALFCPNMAKGLHEKYGDEFEELYVQYE 378
Query: 376 KEGKA-KKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQ 434
KE + KKVV A+ LW IL+++IETG PY+L+KD+CN+KSNQ+NLG IK SNLC E+++
Sbjct: 379 KEERVEKKVVPARKLWKAILEAEIETGVPYILYKDSCNRKSNQKNLGVIKGSNLCAEIVE 438
Query: 435 YTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTE 494
YT P E AVCNLAS+ALP Y+ +N F+F KL EV IV +
Sbjct: 439 YTDPNEIAVCNLASLALPTYI--------------------ENNEFNFNKLKEVAKIVAK 478
Query: 495 NLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETI 554
NLNKIIDVN YP+E A+ SN++HRPIG+GVQGLAD +ILLG PF+S EA +LNK IFETI
Sbjct: 479 NLNKIIDVNKYPLEQAKNSNMKHRPIGMGVQGLADVYILLGYPFESKEAAELNKAIFETI 538
Query: 555 YYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRN 614
Y+ AL S+E+A + GPYE+Y GSPVSKGILQ DMWGV PSDRWDW GL+ I+ +GVRN
Sbjct: 539 YFGALEASNELAQKYGPYESYAGSPVSKGILQYDMWGVQPSDRWDWAGLKKKIAAHGVRN 598
Query: 615 SLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPII 674
SLLVA MPTASTSQILG NECFE +TSNIY+RR LSGEF +VN HL+ +L ++GLW P +
Sbjct: 599 SLLVALMPTASTSQILGFNECFEGFTSNIYTRRTLSGEFQIVNSHLVKNLADLGLWGPEM 658
Query: 675 KNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQP 734
KN II +GS+Q IP IP+ +K +YKTVWEIKQK ++D A DRG Y+D SQS+NIH+ P
Sbjct: 659 KNIIIEHEGSIQNIPSIPDSIKQLYKTVWEIKQKAVIDQAADRGAYVDQSQSMNIHISTP 718
Query: 735 NFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAKMAQMV 794
F +LTS+HF+ W +GLKTG YYLR++ + AIKFTVD K+ + ++ A
Sbjct: 719 TFAQLTSMHFYGWKKGLKTGTYYLRTKPSQAAIKFTVD----KQQAQEYLQKESAPAPAT 774
Query: 795 CSLTNREECMACGS 808
CSL +C++CGS
Sbjct: 775 CSLDG--DCLSCGS 786
>gi|71755889|ref|XP_828859.1| ribonucleoside-diphosphate reductase large chain [Trypanosoma
brucei]
gi|70834245|gb|EAN79747.1| ribonucleoside-diphosphate reductase large chain [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
Length = 838
Score = 962 bits (2488), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 469/797 (58%), Positives = 594/797 (74%), Gaps = 38/797 (4%)
Query: 3 VVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAE 62
V KRDG E + +R+ L G+ + D + + V GV +G++TS LDEL AE
Sbjct: 8 VTKRDGSVEPYDEKVVRSRIVNLMSGIDSYYVDVDDLVRVVGEGVREGMSTSMLDELLAE 67
Query: 63 TAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYD 122
TAA T HPDY LA R+ V+ LHK T +S ++ + ++ H ++ + APLI+++++D
Sbjct: 68 TAAYCVTKHPDYGLLAGRLAVTALHKTTTESVLDSFRVLHEHVSQATRRHAPLISEELWD 127
Query: 123 IIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKV-QGK----VVERPQHMLMRVAVG 177
I K++A L I Y+RDFD++YFG+KTLERSYLL+V +G+ VVERPQ M +RVA+G
Sbjct: 128 IANKHSAALQQIINYERDFDFEYFGYKTLERSYLLRVDKGRGVMEVVERPQQMFLRVALG 187
Query: 178 IHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKE 237
IH +D++ +TY MSQ +FTHA+PTLFNAGTP Q+SSCFLV M++DSI+GIYDTLK+
Sbjct: 188 IHGEDLERVKETYDYMSQGFFTHATPTLFNAGTPFPQMSSCFLVAMREDSIDGIYDTLKQ 247
Query: 238 CAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAF 297
CAIISKSAGGIG+ +HNIRA GSYI GTNGTSNG+VPMLRV+N+TARYVDQGGGKRKGAF
Sbjct: 248 CAIISKSAGGIGIHMHNIRAAGSYIAGTNGTSNGLVPMLRVWNNTARYVDQGGGKRKGAF 307
Query: 298 AVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAP 357
A+YLEPWHADIF FL L+KN GKE+ RARDLFY LW+PDLFMERV+S+G W+L PN AP
Sbjct: 308 AIYLEPWHADIFGFLLLKKNTGKEDQRARDLFYGLWIPDLFMERVESHGTWTLMDPNTAP 367
Query: 358 GLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQ 417
L+DC+G EF LY +YE+EG+ + +QAQ LWF IL+SQ+ETG P+ML+KD CN KSNQ
Sbjct: 368 FLSDCYGQEFTDLYERYEREGRGVRTIQAQELWFLILESQVETGVPFMLYKDACNFKSNQ 427
Query: 418 QNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKN 477
+NLGTIK SNLCTE+++YTS E AVCNLASIALPR+V K+
Sbjct: 428 KNLGTIKCSNLCTEIVEYTSRDEVAVCNLASIALPRFV--------------------KD 467
Query: 478 RYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMP 537
FD+ L EVT +VT NLN++ID N+YPV AR SNLRHRP+GIGVQGLADTF LL +P
Sbjct: 468 GAFDYVALKEVTKVVTRNLNRVIDRNHYPVREARYSNLRHRPVGIGVQGLADTFALLSLP 527
Query: 538 FDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMW------- 590
F EA++LN+ IFETIY+ A+ S+E+A ++GPYET+ GSP S+G LQ D+W
Sbjct: 528 FAHPEAKKLNRQIFETIYFAAVEASTELAEKDGPYETFKGSPASEGKLQFDLWDEERRIR 587
Query: 591 GVNPSD------RWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY 644
G+N WDW L++ + K G+RNSLLVAPMPTASTSQILGNNEC EP+TSNIY
Sbjct: 588 GMNEDSVHSHCGLWDWDSLKERVVKVGMRNSLLVAPMPTASTSQILGNNECIEPFTSNIY 647
Query: 645 SRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWE 704
RRVLSGEF VVNKHL+ +L + LW+ ++ KII +GSV I +IPE ++ +YK VWE
Sbjct: 648 VRRVLSGEFPVVNKHLVKELIRLQLWNDDMRRKIIALNGSVSGIKEIPERIRELYKVVWE 707
Query: 705 IKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAA 764
I+QK L+DMA DRG YID SQSLN+ + P +LTS+HF++W +GLKTGMYYLRS+ AA
Sbjct: 708 IRQKDLIDMAADRGRYIDQSQSLNLFLGTPTSSQLTSMHFYSWKKGLKTGMYYLRSQPAA 767
Query: 765 DAIKFTVDTSVLKENPK 781
DAIKFT+D +KE PK
Sbjct: 768 DAIKFTLDPKAMKELPK 784
>gi|387595820|gb|EIJ93443.1| ribonucleoside-diphosphate reductase large subunit [Nematocida
parisii ERTm1]
Length = 786
Score = 961 bits (2485), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 459/794 (57%), Positives = 587/794 (73%), Gaps = 27/794 (3%)
Query: 16 DKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYA 75
D + LK ++ GL +++K+ GV +TT +L LAAETAA MTT+HP Y+
Sbjct: 19 DILLEYLKGMASGLDSTFIKVNELAEKITMGVCDDMTTEELGVLAAETAADMTTSHPHYS 78
Query: 76 SLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEI 135
LA RI S L K+T FSE + + N + LK +I++ + DII+KN RLDS I
Sbjct: 79 LLAGRIEASFLQKSTPSKFSEAMMKLSNSIIYGTDLKTEIISEKILDIILKNRERLDSAI 138
Query: 136 IYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQ 195
+RDF++ YFG KTL+RSYLLK ++ERPQ++ MRV+VGIH++DI+S I+TY +MS
Sbjct: 139 KDERDFEFSYFGIKTLKRSYLLKSNNVIIERPQYLWMRVSVGIHENDIESVIQTYELMST 198
Query: 196 RWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNI 255
+ F HA+PTLFN+GT QLSSCFL+ M+ DSI+GIY+TLK+CA+ISK AGGIGV++HNI
Sbjct: 199 KHFIHATPTLFNSGTISPQLSSCFLLAMQSDSIDGIYNTLKQCAVISKHAGGIGVNIHNI 258
Query: 256 RATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLR 315
R TGSYI+GT G SNGI+PMLRVF+ T++YVDQGG KR G+ VY+EPWH DIF+FLDLR
Sbjct: 259 RGTGSYIKGTFGHSNGIIPMLRVFDATSKYVDQGGNKRPGSIVVYIEPWHRDIFDFLDLR 318
Query: 316 KNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYE 375
KN GKEE RAR+LF LWVPDLFM+RV+ +G W+LFCPN A GL + +G EFE LY +YE
Sbjct: 319 KNTGKEEMRARNLFLGLWVPDLFMKRVEEDGDWALFCPNMAKGLHEKYGDEFEELYVQYE 378
Query: 376 KEGKA-KKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQ 434
KE + KKVV A+ LW IL+++IETG PY+L+KD+CN+KSNQ+NLG IK SNLC E+++
Sbjct: 379 KEERVEKKVVPARKLWKAILEAEIETGVPYILYKDSCNRKSNQKNLGVIKGSNLCAEIVE 438
Query: 435 YTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTE 494
YT P E AVCNLAS+ALP Y+ +N F+F KL EV IV +
Sbjct: 439 YTDPNEIAVCNLASLALPTYI--------------------ENNEFNFNKLKEVAKIVAK 478
Query: 495 NLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETI 554
NLNKIIDVN YP+E A+ SN++HRPIG+GVQGLAD +ILLG PF+S EA +LNK IFETI
Sbjct: 479 NLNKIIDVNKYPLEQAKNSNMKHRPIGMGVQGLADVYILLGYPFESKEAAELNKAIFETI 538
Query: 555 YYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRN 614
Y+ AL S+E+A + GPYE+Y GSPVSKGILQ DMWGV PS+RWDW GL+ I+ +GVRN
Sbjct: 539 YFGALEASNELAQKYGPYESYAGSPVSKGILQYDMWGVQPSNRWDWAGLKKKIAAHGVRN 598
Query: 615 SLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPII 674
SLLVA MPTASTSQILG NECFE +TSNIY+RR LSGEF +VN HL+ +L ++GLW P +
Sbjct: 599 SLLVALMPTASTSQILGFNECFEGFTSNIYTRRTLSGEFQIVNSHLVKNLADLGLWGPEM 658
Query: 675 KNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQP 734
KN II +GS+Q IP IP+ +K +YKTVWEIKQK ++D A DRG Y+D SQS+NIH+ P
Sbjct: 659 KNIIIEHEGSIQNIPSIPDSIKQLYKTVWEIKQKAVIDQAADRGAYVDQSQSMNIHISTP 718
Query: 735 NFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAKMAQMV 794
F +LTS+HF+ W +GLKTG YYLR++ + AIKFTVD K+ + ++ A
Sbjct: 719 TFAQLTSMHFYGWKKGLKTGTYYLRTKPSQAAIKFTVD----KQQAQEYLQKESAPAPAT 774
Query: 795 CSLTNREECMACGS 808
CSL +C++CGS
Sbjct: 775 CSLDG--DCLSCGS 786
>gi|320038060|gb|EFW19996.1| ribonucleoside-diphosphate reductase large subunit [Coccidioides
posadasii str. Silveira]
Length = 643
Score = 960 bits (2481), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 449/660 (68%), Positives = 538/660 (81%), Gaps = 18/660 (2%)
Query: 32 EHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTK 91
EH D ++QKV +GVY+GVTT +LD LAAETAA MT HPDYA LAARI VSNLHK TK
Sbjct: 2 EHVDAAAITQKVISGVYQGVTTIELDNLAAETAAYMTVTHPDYAILAARIAVSNLHKQTK 61
Query: 92 KSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTL 151
K FS I D+Y++ N ++ AP+I+ Y+I+MK++A L+S I+YDRDF+Y YFGFKTL
Sbjct: 62 KQFSSVIDDLYHYINPKNNRPAPMISQKTYEIVMKHSAELNSAIVYDRDFNYQYFGFKTL 121
Query: 152 ERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTP 211
ERSYLL++ GKV ERPQHM+MRVAVGIH +DI+ AI+TY++MSQ++FTHASPTLFNAGTP
Sbjct: 122 ERSYLLRINGKVAERPQHMIMRVAVGIHGEDIEKAIETYNLMSQKFFTHASPTLFNAGTP 181
Query: 212 RAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNG 271
+ Q++SCFL+ MK+DSIEGIYDTLK CA+ISK+AGGIG++VH IRATGSYI GTNG+SNG
Sbjct: 182 QPQMASCFLIDMKEDSIEGIYDTLKTCALISKTAGGIGLNVHRIRATGSYIAGTNGSSNG 241
Query: 272 IVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYA 331
I+PMLRVFN+TARYVDQGG KR GAFA+YLEPWH+DIFEFLDLRKNHGKEE RARDLF A
Sbjct: 242 IIPMLRVFNNTARYVDQGGNKRPGAFAIYLEPWHSDIFEFLDLRKNHGKEEVRARDLFLA 301
Query: 332 LWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWF 391
LW PDLFM+RV+ NG W+LFCPNEAPGLAD +G EFE LY +YEKEG+ +K ++AQ LW+
Sbjct: 302 LWTPDLFMKRVEKNGDWTLFCPNEAPGLADVYGDEFEALYEQYEKEGRGRKTIKAQKLWY 361
Query: 392 EILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIAL 451
IL++Q ETG P+ML+KD CN+KSNQ+NLGTI+SSNLCTE+I+YTSP E AVCNLAS+AL
Sbjct: 362 AILEAQTETGNPFMLYKDACNRKSNQKNLGTIRSSNLCTEIIEYTSPDEVAVCNLASLAL 421
Query: 452 PRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETAR 511
P YV + RG +DF KL EVT ++ NLNKIID N+YPV AR
Sbjct: 422 PTYVDPV--------------RGE----YDFGKLHEVTQVLVRNLNKIIDGNHYPVPEAR 463
Query: 512 RSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGP 571
+SN RHRPI +GVQGLAD F+ L +PFDS EA+QLN IFETIY+ AL S +IA +GP
Sbjct: 464 KSNFRHRPIAVGVQGLADAFLALRLPFDSPEARQLNIQIFETIYHAALTASCDIAKVDGP 523
Query: 572 YETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILG 631
YETY GSPVS+G+LQ DMW V P+D WDW L+ I+K+GVRNSLLVAPMPTASTSQILG
Sbjct: 524 YETYEGSPVSQGVLQYDMWNVTPTDLWDWDSLKRDIAKHGVRNSLLVAPMPTASTSQILG 583
Query: 632 NNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQI 691
NECFEPYTSNIYSRRVL+GEF VVN LL DL ++GLWS +KN+II + GS+Q IP I
Sbjct: 584 FNECFEPYTSNIYSRRVLAGEFQVVNPWLLKDLVDLGLWSDNMKNRIIAEGGSIQSIPNI 643
>gi|261334781|emb|CBH17775.1| ribonucleoside-diphosphate reductase large chain [Trypanosoma
brucei gambiense DAL972]
Length = 838
Score = 959 bits (2480), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 467/797 (58%), Positives = 593/797 (74%), Gaps = 38/797 (4%)
Query: 3 VVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAE 62
V KRDG E + +R+ L G+ + D + + V GV +G++TS LDEL AE
Sbjct: 8 VTKRDGSVEPYDEKVVRSRIVNLMSGIDSYYVDVDDLVRVVGEGVREGMSTSMLDELLAE 67
Query: 63 TAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYD 122
TAA T HPDY LA R+ V+ LHK T +S ++ + ++ H ++ + APLI+++++D
Sbjct: 68 TAAYCVTKHPDYGLLAGRLAVTALHKTTTESVLDSFRVLHEHVSQATKRHAPLISEELWD 127
Query: 123 IIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKV-QGK----VVERPQHMLMRVAVG 177
I K++A L I Y+RDFD++YFG+KTLERSYLL+V +G+ VVERPQ M +RVA+G
Sbjct: 128 IANKHSAALQQIINYERDFDFEYFGYKTLERSYLLRVDKGRGVMEVVERPQQMFLRVALG 187
Query: 178 IHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKE 237
IH +D++ +TY MSQ +FTHA+PTLFNAGTP Q+SSCFLV M++DSI+GIYDTLK+
Sbjct: 188 IHGEDLERVKETYDYMSQGFFTHATPTLFNAGTPFPQMSSCFLVAMREDSIDGIYDTLKQ 247
Query: 238 CAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAF 297
CAIISKSAGGIG+ +HNIRA GSYI GTNGTSNG+VPMLRV+N+TARYVDQGGGKRKGAF
Sbjct: 248 CAIISKSAGGIGIHMHNIRAAGSYIAGTNGTSNGLVPMLRVWNNTARYVDQGGGKRKGAF 307
Query: 298 AVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAP 357
A+YLEPWHADIF FL L+KN GKE+ RARDLFY LW+PDLFMERV+S+G W+L PN AP
Sbjct: 308 AIYLEPWHADIFGFLLLKKNTGKEDQRARDLFYGLWIPDLFMERVESHGTWTLMDPNTAP 367
Query: 358 GLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQ 417
L+DC+G EF LY +YE+EG+ + +QAQ LWF IL+SQ+ETG P+ML+KD CN KSNQ
Sbjct: 368 FLSDCYGQEFTDLYERYEREGRGVRTIQAQELWFLILESQVETGVPFMLYKDACNFKSNQ 427
Query: 418 QNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKN 477
+NLGTIK SNLCTE+++YTS E AVCNLASIALPR+V K+
Sbjct: 428 KNLGTIKCSNLCTEIVEYTSRDEVAVCNLASIALPRFV--------------------KD 467
Query: 478 RYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMP 537
FD+ L EVT +VT NLN++ID N+YPV AR SNLRHRP+GIGVQGLAD F LL +P
Sbjct: 468 GAFDYVALKEVTKVVTRNLNRVIDRNHYPVCEARYSNLRHRPVGIGVQGLADAFALLSLP 527
Query: 538 FDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMW------- 590
F EA++LN+ IFETIY+ A+ S+E+A ++GPYET+ GSP S+G LQ D+W
Sbjct: 528 FAHPEAKKLNRQIFETIYFAAVEASTELAEKDGPYETFKGSPASEGKLQFDLWDEERRIR 587
Query: 591 GVNPSD------RWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY 644
G+N WDW L++ + K G+RNSLL+APMPTASTSQILGNNEC EP+TSNIY
Sbjct: 588 GMNEDSVHSHCGLWDWDSLKERVVKVGMRNSLLIAPMPTASTSQILGNNECIEPFTSNIY 647
Query: 645 SRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWE 704
RRVLSGEF VVNKHL+ +L + LW+ ++ KII +GSV I +IPE ++ +YK VWE
Sbjct: 648 VRRVLSGEFPVVNKHLVKELIRLRLWNDDMRRKIIALNGSVSGIKEIPERIRELYKVVWE 707
Query: 705 IKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAA 764
I+QK L+DMA DRG YID SQSLN+ + P +LTS+HF++W +GLKTGMYYLRS+ AA
Sbjct: 708 IRQKDLIDMAADRGRYIDQSQSLNLFLATPTSSQLTSMHFYSWKKGLKTGMYYLRSQPAA 767
Query: 765 DAIKFTVDTSVLKENPK 781
DAIKFT+D +KE PK
Sbjct: 768 DAIKFTLDPKAMKELPK 784
>gi|50549777|ref|XP_502360.1| YALI0D03333p [Yarrowia lipolytica]
gi|49648228|emb|CAG80548.1| YALI0D03333p [Yarrowia lipolytica CLIB122]
Length = 849
Score = 959 bits (2478), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/777 (59%), Positives = 574/777 (73%), Gaps = 18/777 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+VVKR G++E + K T RL L + LS ++QK G + GV+T +L+ LA
Sbjct: 1 MHVVKRGGQREPMDMAKFTRRLTALCFNLS-SVVSATEIAQKTVDGAFDGVSTVELNNLA 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
+ETAAA+ T HPDY LAAR+ VSNLHK T F ++ +Y++ +E +G APL+ +
Sbjct: 60 SETAAALMTRHPDYGVLAARLSVSNLHKQTSDKFVNVMQQLYDNKDE-TGEHAPLVTLAL 118
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+ + L+ I Y RD Y YFGFKTLE+SYLL+V G VVERPQHMLMRVA+GIH
Sbjct: 119 LERAQNHGETLELAISYYRDMTYSYFGFKTLEKSYLLRVGGNVVERPQHMLMRVALGIHG 178
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDI +TY +S R FTHASPTLFNAGTP+ QLSSCFLV M DSI+GIYDTLK CA
Sbjct: 179 DDIFKVRETYQALSLRKFTHASPTLFNAGTPQGQLSSCFLVAMAADSIDGIYDTLKTCAQ 238
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIRA G+ I G+ G S+GIVPMLRVFN+TARYVDQGG KR GAFAVY
Sbjct: 239 ISKTAGGIGLHIHNIRAKGALITGSQGRSSGIVPMLRVFNNTARYVDQGGNKRPGAFAVY 298
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADI +FL+LRKNHG EE+RARDLFYALWVPDLFM +V++ WSLFCP +APGLA
Sbjct: 299 LEPWHADILDFLNLRKNHGAEENRARDLFYALWVPDLFMRKVENGEKWSLFCPRKAPGLA 358
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG EF+R Y YE +G + AQ L+ IL SQIETG P+ML+KD+CN KSNQ+NL
Sbjct: 359 DVWGEEFDRKYEDYESKGLYNSQIDAQELFKAILTSQIETGGPFMLYKDSCNAKSNQKNL 418
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE++QY+SP E AVCNLAS+ALP +V +L GS GS +
Sbjct: 419 GTIKSSNLCTEIVQYSSPDEVAVCNLASVALPEFV------------QLKGSSGS----Y 462
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+F +L E +T NLN II+ N YPV+ A SN RHRPI +GVQGLAD F+ L MPFDS
Sbjct: 463 NFGELHETVKHMTRNLNCIIEANCYPVKEAETSNKRHRPIAVGVQGLADVFMKLRMPFDS 522
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA +LN IFETIY+ A S E+AA GPYETY GSP S+G LQ D+W PSD WDW
Sbjct: 523 PEAAELNVLIFETIYHAACEASIELAAELGPYETYEGSPASQGKLQFDLWNKTPSDLWDW 582
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ ++K+G+RNSLLVAPMPTASTSQILG+NECFEPYTSNIY RRV +GEF+VVN+ L
Sbjct: 583 ARLKTKLAKHGMRNSLLVAPMPTASTSQILGHNECFEPYTSNIYLRRVQAGEFLVVNQWL 642
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
+ DL ++G+W+ +KN+II+D+GS+Q I QIPE ++A+Y+T WEIK + ++DMA R Y
Sbjct: 643 MKDLIKLGMWTEEMKNRIIHDNGSIQSITQIPEHIRAVYRTAWEIKARNIIDMAAARAPY 702
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
ID SQSLNI M + GK+T++HFH W GLKTGMYYLR+ AA AI+FTVD ++L+
Sbjct: 703 IDQSQSLNIFMPEITHGKITAMHFHGWKAGLKTGMYYLRTPPAAHAIQFTVDKTLLQ 759
>gi|3914639|sp|O15909.1|RIR1_TRYBB RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleotide reductase R1 subunit
gi|2411477|gb|AAB70704.1| ribonucleotide reductase large subunit [Trypanosoma brucei]
Length = 838
Score = 958 bits (2476), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 466/797 (58%), Positives = 590/797 (74%), Gaps = 38/797 (4%)
Query: 3 VVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAE 62
V KRDG E + +R+ L G+ + D + + V GV +G++TS LDEL AE
Sbjct: 8 VTKRDGSVEPYDEKVVRSRIVNLMSGIDSYYVDVDDLVRVVGEGVREGMSTSMLDELLAE 67
Query: 63 TAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYD 122
TAA T HPDY LA R+ V+ LHK T +S ++ + ++ H ++ + APLI+++++D
Sbjct: 68 TAAYCVTKHPDYGLLAGRLAVTALHKTTTESVLDSFRVLHEHVSQATKRHAPLISEELWD 127
Query: 123 IIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQG-----KVVERPQHMLMRVAVG 177
I K++A L I Y+RDFD++YFG+KTLERSYLL+V +VVERPQ M +RVA+G
Sbjct: 128 IANKHSAALQQIINYERDFDFEYFGYKTLERSYLLRVHKGRGVMEVVERPQQMFLRVALG 187
Query: 178 IHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKE 237
IH +D++ +TY MSQ +FTHA+PTLFNAGTP Q+SSCFLV M++DSI+GIYDTLK+
Sbjct: 188 IHGEDLERVKETYDYMSQGFFTHATPTLFNAGTPFPQMSSCFLVAMREDSIDGIYDTLKQ 247
Query: 238 CAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAF 297
CAIISKSAGGIG+ +HNIRA GSYI GTNGTSNG+VPMLRV+N+TARYVDQGGGKRKGAF
Sbjct: 248 CAIISKSAGGIGIHMHNIRAAGSYIAGTNGTSNGLVPMLRVWNNTARYVDQGGGKRKGAF 307
Query: 298 AVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAP 357
A+YLEPWHADIF FL L+KN GKE+ RARDLFY LW+PDLFMERV+S+G W+L PN AP
Sbjct: 308 AIYLEPWHADIFGFLLLKKNTGKEDQRARDLFYGLWIPDLFMERVESHGTWTLMDPNTAP 367
Query: 358 GLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQ 417
L+DC+G EF LY +YE+EG+ + +QAQ LWF IL+SQ+ETG P+ML+KD CN KSNQ
Sbjct: 368 FLSDCYGQEFTDLYERYEREGRGVRTIQAQELWFLILESQVETGVPFMLYKDACNFKSNQ 427
Query: 418 QNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKN 477
+NLGTIK SNLCTE+++YTS E AVCNLASIALPR+V K+
Sbjct: 428 KNLGTIKCSNLCTEIVEYTSRDEVAVCNLASIALPRFV--------------------KD 467
Query: 478 RYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMP 537
FD+ L EVT +VT NLN++ID N+YPV AR SNLRHRP+GIGVQGLAD F LL +P
Sbjct: 468 GAFDYVALKEVTKVVTRNLNRVIDRNHYPVCEARYSNLRHRPVGIGVQGLADAFALLSLP 527
Query: 538 FDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMW------- 590
F EA++LN+ IFETIY A+ S+E+A ++GPYET+ GSP S+G LQ D+W
Sbjct: 528 FAHPEAKKLNRQIFETIYIAAVEASTELAEKDGPYETFKGSPASEGKLQFDLWDEERRIR 587
Query: 591 GVNPSD------RWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY 644
G+N WDW L++ + K G+RNSLL+APMPTASTSQILGNNEC EP+TSNIY
Sbjct: 588 GMNEDSVHSHCGLWDWDSLKERVVKVGMRNSLLIAPMPTASTSQILGNNECIEPFTSNIY 647
Query: 645 SRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWE 704
RRVLSGEF VVNKHL+ +L + LW+ ++ KII +GSV I +IPE ++ +YK VWE
Sbjct: 648 VRRVLSGEFPVVNKHLVKELIRLRLWNDDMRRKIIALNGSVSGIKEIPERIRELYKVVWE 707
Query: 705 IKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAA 764
I+QK L+DMA DRG YID SQSLN+ + P +LTS+HF++W +GLKTGMYYLRS+ AA
Sbjct: 708 IRQKDLIDMAADRGRYIDQSQSLNLFLATPTSSQLTSMHFYSWKKGLKTGMYYLRSQPAA 767
Query: 765 DAIKFTVDTSVLKENPK 781
DAIKFT+D +KE PK
Sbjct: 768 DAIKFTLDPKAMKELPK 784
>gi|410084533|ref|XP_003959843.1| hypothetical protein KAFR_0L01000 [Kazachstania africana CBS 2517]
gi|372466436|emb|CCF60708.1| hypothetical protein KAFR_0L01000 [Kazachstania africana CBS 2517]
Length = 885
Score = 956 bits (2470), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/766 (57%), Positives = 579/766 (75%), Gaps = 15/766 (1%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG++E V FDKITAR+ +L YGL H D V V+Q++ TGVY+GVTTS+LD LA
Sbjct: 1 MYVIKRDGRKEPVRFDKITARISRLCYGLDPTHVDAVKVTQRIITGVYEGVTTSELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AET A MTT HPDY LAAR+ +SNLHK T K FS+ ++D++ + N R+G APL+++++
Sbjct: 61 AETCAFMTTLHPDYGQLAARLAISNLHKQTTKQFSKVVEDLHAYVNPRNGRHAPLVSEEL 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
I+ + ++S I+YDRD+ + YFGFK LERSYLL++ G+VVERPQH++MRVA+GIH
Sbjct: 121 LQIVKDHKDEINSAIVYDRDYQFTYFGFKALERSYLLRLNGEVVERPQHLIMRVALGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D+I++AI+TY++MS ++F H S TLFNAGT +Q+SS + V MKDDSIEGIYDTLKECA+
Sbjct: 181 DNIEAAIETYNLMSLKYFIHGSSTLFNAGTVNSQMSSSYTVAMKDDSIEGIYDTLKECAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
+SKSAGG+G+ V NIR+TGSYI GTNGTSNGI+PM+RV+N+TAR+VDQGG KR GA A+Y
Sbjct: 241 VSKSAGGMGLHVTNIRSTGSYIAGTNGTSNGIIPMVRVYNNTARFVDQGGNKRPGAVAMY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWHADIF+F+D++K GK+E RARDL ALWVPDLFM+RV +G W+LF P+ APGL
Sbjct: 301 IEPWHADIFDFIDVKKTSGKDEIRARDLLPALWVPDLFMQRVHEDGDWTLFSPSAAPGLV 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EF+ LYT+YE+EG+ K ++AQ LW+ IL++Q + P M++KD CNKKSNQ+NL
Sbjct: 361 DVYGDEFDALYTRYEREGRG-KTIKAQKLWYCILEAQNDCSAPIMVYKDPCNKKSNQKNL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNL +V+ Y+ ET N+AS+ALP ++ S K +
Sbjct: 420 GTIKSSNLSGDVVVYSDAKETPASNMASLALPAFIEI--------------SEDGKTSTY 465
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+F+KL ++T IVT NLN IID N YPV ARR+ L+HRPI IGVQGLADTF+ L + FDS
Sbjct: 466 NFKKLHDITKIVTRNLNVIIDRNTYPVPEARRATLKHRPIAIGVQGLADTFMTLRLAFDS 525
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LN+ IFETIY+ +L S E+A ++GPY++++GSP S+GILQ D+W PS WDW
Sbjct: 526 AEAQLLNQQIFETIYHASLEASVELAKKDGPYQSFNGSPSSRGILQMDLWDAKPSGVWDW 585
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR I + G+RNSL A MPT+STSQILG ECFEP +SN+Y RVLSGEF VVN +L
Sbjct: 586 DALRKDIMEYGLRNSLTTAAMPTSSTSQILGYTECFEPISSNMYQHRVLSGEFQVVNPYL 645
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL ++G+W +K I+ +GS+Q +P +P+ELKAIYKT WEI QK ++DMA DR Y
Sbjct: 646 LRDLVDLGIWDETMKQHIVSQNGSIQALPNVPQELKAIYKTAWEISQKKIIDMATDRAIY 705
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADA 766
ID SQSL++ + GK+TS+HF+ W +GLKTGMY L S+ A A
Sbjct: 706 IDQSQSLSLFLRATTMGKITSMHFYGWNKGLKTGMYKLNSQPVAAA 751
>gi|296217190|ref|XP_002754897.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
isoform 3 [Callithrix jacchus]
Length = 711
Score = 952 bits (2461), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/664 (67%), Positives = 538/664 (81%), Gaps = 22/664 (3%)
Query: 148 FKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFN 207
KTLERSYLLK+ GKV ERPQHMLMRV+VGIHK+DID+AI+TY+++S+RWFTHASPTLFN
Sbjct: 67 LKTLERSYLLKINGKVAERPQHMLMRVSVGIHKEDIDAAIETYNLLSERWFTHASPTLFN 126
Query: 208 AGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNG 267
AGT R QLSSCFL+ MKDDSIEGIYDTLK+CA+ISKSAGGIGV+V IRATGSYI GTNG
Sbjct: 127 AGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCALISKSAGGIGVAVSCIRATGSYIAGTNG 186
Query: 268 TSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARD 327
SNG+VPMLRV+N+TARYVDQGG KR GAFA+YLEPWH DIFEFLDL+KN GKEE RARD
Sbjct: 187 NSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARD 246
Query: 328 LFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQ 387
LF+ALW+PDLFM+RV++N WSL CPNE PGL + WG EFE+LY YEK+ + +KVV+AQ
Sbjct: 247 LFFALWIPDLFMKRVETNQDWSLMCPNECPGLDEVWGEEFEKLYESYEKQRRVRKVVKAQ 306
Query: 388 NLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLA 447
LW+ I++SQ ETGTPYML+KD+CN+KSNQQNLGTIK SNLCTE+++YTS E AVCNLA
Sbjct: 307 QLWYAIIESQTETGTPYMLYKDSCNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLA 366
Query: 448 SIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPV 507
S+AL YV + +DF+KLAEVT ++ NLNKIID+NYYPV
Sbjct: 367 SLALNMYV-------------------TSEHTYDFQKLAEVTKVIVRNLNKIIDINYYPV 407
Query: 508 ETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAA 567
A SN RHRPIGIGVQGLAD FIL+ PF+S EAQ LNK IFETIYY AL S ++A
Sbjct: 408 PEACLSNKRHRPIGIGVQGLADAFILMRYPFESAEAQLLNKQIFETIYYGALEASCDLAK 467
Query: 568 REGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTS 627
GPYETY GSPVS+GILQ DMW V P+D WDW L++ I+K G+RNSLL+APMPTAST+
Sbjct: 468 EHGPYETYEGSPVSRGILQYDMWNVTPTDLWDWKLLKEKIAKYGIRNSLLIAPMPTASTA 527
Query: 628 QILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQK 687
QILGNNE EPYTSNIY+RRVLSGEF +VN HLL DLTE GLW +KN+II +GS+Q
Sbjct: 528 QILGNNESIEPYTSNIYTRRVLSGEFQIVNPHLLKDLTERGLWHEEMKNQIIACNGSIQS 587
Query: 688 IPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAW 747
IP+IP++LK +YKTVWEI QKT++ MA +RG +ID SQSLNIH+ +PN+GKLTS+HF+ W
Sbjct: 588 IPEIPDDLKQLYKTVWEISQKTVLRMAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGW 647
Query: 748 LRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDA---KMAQMVCSLTNREECM 804
+GLKTGMYYLR+R AA+ I+FT++ LK+ KV+ +++ A M+CSL NR+EC+
Sbjct: 648 KQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKEKVSKEEEEKERNTAAMMCSLENRDECL 707
Query: 805 ACGS 808
CGS
Sbjct: 708 MCGS 711
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 55/74 (74%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG+QE V FDKIT+R++KL YGL+++ DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDY 74
AETAA + T Y
Sbjct: 61 AETAATLKTLERSY 74
>gi|402894484|ref|XP_003910386.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit
isoform 2 [Papio anubis]
Length = 711
Score = 950 bits (2455), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 448/659 (67%), Positives = 536/659 (81%), Gaps = 22/659 (3%)
Query: 153 RSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPR 212
RSYLLK+ GKV ERPQHMLMRV+VGIHK+DID+AI+TY+++S+RWFTHASPTLFNAGT R
Sbjct: 72 RSYLLKINGKVAERPQHMLMRVSVGIHKEDIDAAIETYNLLSERWFTHASPTLFNAGTNR 131
Query: 213 AQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGI 272
QLSSCFL+ MKDDSIEGIYDTLK+CA+ISKSAGGIGV+V IRATGSYI GTNG SNG+
Sbjct: 132 PQLSSCFLLSMKDDSIEGIYDTLKQCALISKSAGGIGVAVSCIRATGSYIAGTNGNSNGL 191
Query: 273 VPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYAL 332
VPMLRV+N+TARYVDQGG KR GAFA+YLEPWH DIFEFLDL+KN GKEE RARDLF+AL
Sbjct: 192 VPMLRVYNNTARYVDQGGNKRPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFAL 251
Query: 333 WVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFE 392
W+PDLFM+RV++N WSL CPNE PGL + WG EFE+LY YEK+G+ +KVV+AQ LW+
Sbjct: 252 WIPDLFMKRVETNQDWSLMCPNECPGLDEVWGEEFEKLYESYEKQGRVRKVVKAQQLWYA 311
Query: 393 ILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALP 452
I++SQ ETGTPYML+KD+CN+KSNQQNLGTIK SNLCTE+++YTS E AVCNLAS+AL
Sbjct: 312 IIESQTETGTPYMLYKDSCNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASLALN 371
Query: 453 RYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARR 512
YV + +DF+KLAEVT +V NLNKIID+NYYPV A
Sbjct: 372 MYV-------------------TSEHTYDFKKLAEVTKVVVRNLNKIIDINYYPVPEACL 412
Query: 513 SNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPY 572
SN RHRPIGIGVQGLAD FIL+ PF+S EAQ LNK IFETIYY AL S ++A +GPY
Sbjct: 413 SNKRHRPIGIGVQGLADAFILMRYPFESAEAQLLNKQIFETIYYGALEASCDLAKEQGPY 472
Query: 573 ETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGN 632
ETY GSPVSKGILQ DMW V P+D WDW L++ I+K G+RNSLL+APMPTAST+QILGN
Sbjct: 473 ETYEGSPVSKGILQYDMWNVTPTDLWDWNLLKENIAKYGIRNSLLIAPMPTASTAQILGN 532
Query: 633 NECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIP 692
NE EPYTSNIY+RRVLSGEF +VN HLL DLTE GLW +KN+II +GS+Q IP+IP
Sbjct: 533 NESIEPYTSNIYTRRVLSGEFQIVNPHLLKDLTERGLWHEEMKNQIIACNGSIQSIPEIP 592
Query: 693 EELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLK 752
++LK +YKTVWEI QKT++ MA +RG +ID SQSLNIH+ +PN+GKLTS+HF+ W +GLK
Sbjct: 593 DDLKQLYKTVWEISQKTVLKMAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLK 652
Query: 753 TGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDA---KMAQMVCSLTNREECMACGS 808
TGMYYLR+R AA+ I+FT++ LK+ KV+ +++ A MVCSL NR+EC+ CGS
Sbjct: 653 TGMYYLRTRPAANPIQFTLNKEKLKDKEKVSKEEEEKERNTAAMVCSLENRDECLMCGS 711
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 45/57 (78%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLD 57
M+V+KRDG+QE V FDKIT+R++KL YGL+++ DP ++ KV G+Y GVTT +LD
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELD 57
>gi|197322445|ref|YP_002154718.1| putative ribonucleotide reductase large subunit [Feldmannia species
virus]
gi|197130512|gb|ACH46848.1| putative ribonucleotide reductase large subunit [Feldmannia species
virus]
Length = 773
Score = 949 bits (2454), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/776 (56%), Positives = 584/776 (75%), Gaps = 17/776 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KR ++E V FDKIT R++KL GL + DPV V+ +V G+Y GVTT +LD LA
Sbjct: 1 MYVIKRSQRRENVMFDKITTRVRKLCEGLDSDFVDPVEVTMRVNQGIYAGVTTVELDLLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AET A M+TNHPDY+ LAARI +SNL+K T+ + ++ M + N + APL+++++
Sbjct: 61 AETCAFMSTNHPDYSILAARICLSNLYKETESCYKTLVQKMREYVNPETSQHAPLVSEEL 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
++ N+ ++ E + + +YDYF FKTLE+SYLLK+ G+V ERP +LMRVA+GIH
Sbjct: 121 ASVVANNS-KVIQEALDEVLENYDYFAFKTLEKSYLLKMDGRVSERPHQLLMRVAIGIHG 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D+ + ++ + M + +T A+PTLFNAGTP Q+SSCFL+ K DSI GI+D+LK+CA
Sbjct: 180 HDMPNVLRAFRDMRDKRYTMATPTLFNAGTPVPQMSSCFLMTNKADSISGIFDSLKDCAT 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+SVH++RA GSYIRGTNGTSNG+VPMLRVFN+ ARYVDQGGG+RKG+FAVY
Sbjct: 240 ISKYAGGIGISVHDVRARGSYIRGTNGTSNGLVPMLRVFNNAARYVDQGGGRRKGSFAVY 299
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHAD+ F+DLRKNHG + RARDLFYALWVPDLFM+RV+ N WSLFCPNE PGL+
Sbjct: 300 LEPWHADVQAFIDLRKNHGNDLERARDLFYALWVPDLFMKRVEKNSAWSLFCPNECPGLS 359
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D G+ FE LY +YE +GKA+KV+ A+ LW +I+ Q+ETGTPY+LFKD+ N KSNQQ+L
Sbjct: 360 DVCGSRFEDLYARYESQGKARKVMDARKLWDQIVDVQVETGTPYILFKDSVNAKSNQQHL 419
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G IKSSNLCTE+++YTSP E AVCNL SI L +VR+ S F
Sbjct: 420 GVIKSSNLCTEIVEYTSPDEIAVCNLGSINLSTFVRDAYTSTAS---------------F 464
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D E+L G + NLN++ID N+YPV A SNL+HRPIGIGVQG AD +++ +P+DS
Sbjct: 465 DLEELVNFAGRMVLNLNRVIDKNFYPVPEAENSNLKHRPIGIGVQGFADALVMMRLPYDS 524
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAARE-GPYETYHGSPVSKGILQPDMWGVNPSDRWD 599
+A LN +IFE+IYY A++ S +A + GP+E++ GSP+ +GI Q D+WGV PS +D
Sbjct: 525 VDAAGLNLNIFESIYYGAMKQSVHLARSDGGPHESFRGSPLEQGIFQFDLWGVKPSGLYD 584
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR + K+GV+N+LLVAPMPTAST+QILGNNE FEP+TSN+Y+RRVL+GEF V+NKH
Sbjct: 585 WEALRADVIKHGVKNALLVAPMPTASTAQILGNNESFEPFTSNVYNRRVLAGEFPVINKH 644
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL DLT +G+W +KN+++ +GSVQ IPQIPE++KA+YKTVWEI Q+ ++D A RG
Sbjct: 645 LLRDLTSLGVWGDKVKNQLLRANGSVQNIPQIPEDIKALYKTVWEIPQRVILDHAAARGP 704
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
+I SQS+NIHM +P+ GK+TS+ F+ W +GLKTGMYYLR+R AD+I+F ++ SV
Sbjct: 705 FICQSQSMNIHMAEPSRGKITSMLFYGWRKGLKTGMYYLRTRPKADSIQFALEKSV 760
>gi|194389080|dbj|BAG61557.1| unnamed protein product [Homo sapiens]
Length = 683
Score = 948 bits (2451), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/636 (69%), Positives = 523/636 (82%), Gaps = 19/636 (2%)
Query: 148 FKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFN 207
FKTLERSYLLK+ GKV ERPQHMLMRV+VGIHK+DID+AI+TY+++S+RWFTHASPTLFN
Sbjct: 67 FKTLERSYLLKINGKVAERPQHMLMRVSVGIHKEDIDAAIETYNLLSERWFTHASPTLFN 126
Query: 208 AGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNG 267
AGT R QLSSCFL+ MKDDSIEGIYDTLK+CA+ISKSAGGIGV+V IRATGSYI GTNG
Sbjct: 127 AGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCALISKSAGGIGVAVSCIRATGSYIAGTNG 186
Query: 268 TSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARD 327
SNG+VPMLRV+N+TARYVDQGG KR GAFA+YLEPWH DIFEFLDL+KN GKEE RARD
Sbjct: 187 NSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARD 246
Query: 328 LFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQ 387
LF+ALW+PDLFM+RV++N WSL CPNE PGL + WG EFE+LY YEK+G+ +KVV+AQ
Sbjct: 247 LFFALWIPDLFMKRVETNQDWSLMCPNECPGLDEVWGEEFEKLYASYEKQGRVRKVVKAQ 306
Query: 388 NLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLA 447
LW+ I++SQ ETGTPYML+KD+CN+KSNQQNLGTIK SNLCTE+++YTS E AVCNLA
Sbjct: 307 QLWYAIIESQTETGTPYMLYKDSCNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLA 366
Query: 448 SIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPV 507
S+AL YV + +DF+KLAEVT +V NLNKIID+NYYPV
Sbjct: 367 SLALNMYV-------------------TSEHTYDFKKLAEVTKVVVRNLNKIIDINYYPV 407
Query: 508 ETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAA 567
A SN RHRPIGIGVQGLAD FIL+ PF+S EAQ LNK IFETIYY AL S ++A
Sbjct: 408 PEACLSNKRHRPIGIGVQGLADAFILMRYPFESAEAQLLNKQIFETIYYGALEASCDLAK 467
Query: 568 REGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTS 627
+GPYETY GSPVSKGILQ DMW V P+D WDW L++ I+K G+RNSLL+APMPTAST+
Sbjct: 468 EQGPYETYEGSPVSKGILQYDMWNVTPTDLWDWKVLKEKIAKYGIRNSLLIAPMPTASTA 527
Query: 628 QILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQK 687
QILGNNE EPYTSNIY+RRVLSGEF +VN HLL DLTE GLW +KN+II +GS+Q
Sbjct: 528 QILGNNESIEPYTSNIYTRRVLSGEFQIVNPHLLKDLTERGLWHEEMKNQIIACNGSIQS 587
Query: 688 IPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAW 747
IP+IP++LK +YKTVWEI QKT++ MA +RG +ID SQSLNIH+ +PN+GKLTS+HF+ W
Sbjct: 588 IPEIPDDLKQLYKTVWEISQKTVLKMAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGW 647
Query: 748 LRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVT 783
+GLKTGMYYLR+R AA+ I+FT++ LK+ KV+
Sbjct: 648 KQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKEKVS 683
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 54/74 (72%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG+QE V FDKIT+R++KL YGL+++ DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDY 74
AETAA T Y
Sbjct: 61 AETAATFKTLERSY 74
>gi|378756094|gb|EHY66119.1| ribonucleoside-diphosphate reductase [Nematocida sp. 1 ERTm2]
Length = 785
Score = 942 bits (2435), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 464/807 (57%), Positives = 590/807 (73%), Gaps = 29/807 (3%)
Query: 3 VVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAE 62
++KR GK+ + + + LKK++ GL +++K+ GV G+TT +L L AE
Sbjct: 7 ILKR-GKEVEYNQEILLEHLKKMAVGLDSTFIKVTELAEKITMGVCDGMTTEELGTLTAE 65
Query: 63 TAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYD 122
TAA MTT+HP Y+ LA RI S L K+T +FS+ + + + LK +I+ D+ +
Sbjct: 66 TAATMTTSHPHYSLLAGRIEASLLQKSTPSTFSDAMCMLATTSINGTDLKTEIISPDIIE 125
Query: 123 IIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDD 182
I+MKN RLD+ I DRDF++ YFG KTL RSYLLKV +VERPQ+M MRV+VGIH+DD
Sbjct: 126 IVMKNKERLDAAIQNDRDFEFSYFGIKTLTRSYLLKVNNVIVERPQYMWMRVSVGIHRDD 185
Query: 183 IDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIIS 242
ID+ I+TY +MS + F HA+PTLFN+GT QLSSCFL+ M+ DSI+GIY+TLK+CA+IS
Sbjct: 186 IDAVIETYELMSTKHFIHATPTLFNSGTISPQLSSCFLLAMQSDSIDGIYNTLKQCAVIS 245
Query: 243 KSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLE 302
K AGGIGV++HNIR TGSYI+GT G SNGI+PMLRVF+ T++YVDQGG KR G+ VY+E
Sbjct: 246 KHAGGIGVNIHNIRGTGSYIKGTFGHSNGIIPMLRVFDATSKYVDQGGNKRPGSIVVYIE 305
Query: 303 PWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADC 362
PWH DIF+FLDL+KN GKEE RAR+LF LW+PDLFM RV+ +G W LFCPN A GL +
Sbjct: 306 PWHRDIFDFLDLKKNTGKEEMRARNLFLGLWIPDLFMRRVEEDGDWCLFCPNLAKGLHEK 365
Query: 363 WGTEFERLYTKYEKEGK-AKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG 421
+G+EFE LYT YEK + KKV+ A+ LW IL+++IETG PY+L+KD+CN+KSNQ+NLG
Sbjct: 366 YGSEFEELYTTYEKTPEIEKKVISARKLWKAILEAEIETGVPYILYKDSCNRKSNQKNLG 425
Query: 422 TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFD 481
IK SNLC E+++YT P+E AVCNLAS+ALP Y+ +N+ F+
Sbjct: 426 VIKGSNLCAEIVEYTDPSEIAVCNLASLALPTYI--------------------ENKQFN 465
Query: 482 FEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDST 541
F KL EV IV +NLNKIIDVN YP+E A+ SNL++RPIGIGVQGLAD +ILLG PF+S
Sbjct: 466 FNKLKEVAKIVAKNLNKIIDVNKYPLEEAKYSNLKNRPIGIGVQGLADVYILLGYPFESK 525
Query: 542 EAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWG 601
EA +LNK IFETIYY AL S E+A GPY++Y GSPVS+GILQ DMW V PSDRWDW
Sbjct: 526 EAAELNKAIFETIYYGALEASCELAEIHGPYKSYAGSPVSQGILQYDMWDVQPSDRWDWA 585
Query: 602 GLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
GL+ I+ +GVRNSLLVA MPTASTSQILG NECFE +TSNIY+RR LSGEF +VN HL+
Sbjct: 586 GLKKRIAAHGVRNSLLVALMPTASTSQILGFNECFEGFTSNIYTRRTLSGEFQIVNMHLV 645
Query: 662 HDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYI 721
DL ++GLW P +KN II +GS+Q IP IP+ +K +YKTVWEIKQK ++D A DRG Y+
Sbjct: 646 KDLADLGLWGPEMKNIIIEHEGSIQNIPSIPDNIKLLYKTVWEIKQKAVIDQAADRGAYV 705
Query: 722 DHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPK 781
D SQS+NIH+ P F +LTS+HF+ W +GLKTG YYLR++ AIKFTVD KE +
Sbjct: 706 DQSQSMNIHISAPTFAQLTSMHFYGWKKGLKTGTYYLRTKPTQAAIKFTVDKQQAKEYLQ 765
Query: 782 VTDDDDAKMAQMVCSLTNREECMACGS 808
A CSL +C++CGS
Sbjct: 766 KESSPPA-----TCSLDG--DCLSCGS 785
>gi|322792463|gb|EFZ16447.1| hypothetical protein SINV_80023 [Solenopsis invicta]
Length = 802
Score = 941 bits (2433), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 471/821 (57%), Positives = 586/821 (71%), Gaps = 72/821 (8%)
Query: 39 VSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETI 98
V+ +V G+Y GVTT LD LAAETAA M TNHPDYA LAARI VSNLHK TKKSFSE +
Sbjct: 3 VAIQVIRGLYSGVTTVILDNLAAETAATMATNHPDYAILAARIDVSNLHKETKKSFSEVM 62
Query: 99 KDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLK 158
D+Y N + P+I++ Y+II NA RLDS IIYDRDF Y+Y GFKTLERSYLLK
Sbjct: 63 HDLYYARNSITNQHTPIISEHYYNIIKNNADRLDSAIIYDRDFSYNYIGFKTLERSYLLK 122
Query: 159 VQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSS- 217
+ GK+VERPQHMLMRVAVGIH++DID I+TY+ +S+R+FTHASPTLFNA T Q+SS
Sbjct: 123 INGKIVERPQHMLMRVAVGIHENDIDKVIETYNYLSERYFTHASPTLFNACTNNQQMSSL 182
Query: 218 --------CFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTS 269
CFL+ +++DSI+GIY LK+C++ISK AGGIG++VH IRA + TN T+
Sbjct: 183 RLISEALLCFLLTLENDSIKGIYSMLKKCSLISKYAGGIGINVHCIRAKSA--EDTN-TT 239
Query: 270 NGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLF 329
NG+V +L+++N+ A YVDQGG KR GAFA+YLEPWHADIFEFL+L++N G RARDLF
Sbjct: 240 NGLVSVLKLYNEIAVYVDQGGNKRPGAFAIYLEPWHADIFEFLELKRNIGDGNMRARDLF 299
Query: 330 YALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNL 389
Y LW+PDLFMERV ++ +WSL CP E+PGLAD WG EF+ LY +YEKEG+ +K V+A+ +
Sbjct: 300 YGLWIPDLFMERVYNDEMWSLMCPYESPGLADVWGDEFKELYIRYEKEGRYRKQVEARTV 359
Query: 390 WFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASI 449
W IL+SQ ETGTPYML+KD CN+KSN Q+LGTIK SNLCTE+++Y+ P E AVCNLASI
Sbjct: 360 WLAILRSQGETGTPYMLYKDHCNRKSNHQHLGTIKCSNLCTEIVEYSGPGEVAVCNLASI 419
Query: 450 ALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVET 509
A+ +V + + FDF+KL V IVT NL+K+IDVN+YP+
Sbjct: 420 AVNMFV------------------NTDTKTFDFDKLKTVAKIVTRNLDKVIDVNFYPIPE 461
Query: 510 ARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAARE 569
+ SN +HRPIGIG+QGLAD F+L+ FDS EA++LN IFET+YY AL S E+AA +
Sbjct: 462 TKASNQKHRPIGIGIQGLADAFLLMRYSFDSKEAKELNIKIFETLYYGALECSCELAAEK 521
Query: 570 GPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQI 629
G YETY GSPVSKGILQ DMW V P+D W+W L+ I+++GVRNSLL+APMPTAST+QI
Sbjct: 522 GTYETYQGSPVSKGILQYDMWNVKPTDLWNWDELKAKIAEHGVRNSLLIAPMPTASTAQI 581
Query: 630 LGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIP 689
LGNNE EPYTSNIY RRVLSGEFV+VN HLL DLT GLW ++N+I+ + GSVQ I
Sbjct: 582 LGNNESIEPYTSNIYVRRVLSGEFVIVNPHLLRDLTARGLWDEDMQNEILANFGSVQNIE 641
Query: 690 QIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLR 749
+IP++LK +YKTVWEI QK +++MA DRG +ID SQSLN+H+ P KLTS+HF W
Sbjct: 642 RIPDDLKMLYKTVWEIPQKVILEMAADRGAFIDQSQSLNVHIGDPTTEKLTSMHFFGWRS 701
Query: 750 GLKTGMYYLRSRAAADAIKFTVDTSVLKE-----------------------------NP 780
GLKTGMYYLR++ AA+ I+FTVD S L+ N
Sbjct: 702 GLKTGMYYLRTKPAANPIQFTVDQSKLQSRDSISSASNTSTSTINSTPINSTPIHQSPNK 761
Query: 781 KVTDDDDAKM-------------AQMVCSLTNREECMACGS 808
V DDDA+ A + CS N+E C AC S
Sbjct: 762 DVNGDDDAEKRKQLSQQASKNLEAMLACSRKNKEACTACSS 802
>gi|38683667|gb|AAR26844.1| FirrV-1-A20 [Feldmannia irregularis virus a]
Length = 766
Score = 941 bits (2431), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/773 (57%), Positives = 571/773 (73%), Gaps = 17/773 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KR G +E + FDK+TAR++KL+ GL +++ DP+ V+ KV G+Y GVTT +LD LA
Sbjct: 1 MYVIKRSGLRENIKFDKVTARVRKLTDGLDLKYVDPIEVTMKVNQGIYSGVTTRELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AET A M+ NHPDY+ LAARI VSNL+K T+ +S +K + ++ N +G APL++ ++
Sbjct: 61 AETCAYMSINHPDYSVLAARICVSNLYKETESCYSTLVKQLRDYVNPETGEWAPLVSAEL 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
++ +N ++ E + YDYF +KTLE+SYLLK+ GK+ ERP +LMRVA+GIH
Sbjct: 121 VKVVTENREQV-QEALDGFAETYDYFAYKTLEKSYLLKMNGKIAERPHQLLMRVAIGIHG 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDI SA++TY M + +T A+PTLFNAGTP Q+SSCFL+ KDDSI GI+DTLK CA
Sbjct: 180 DDITSALQTYRDMGSKRYTMATPTLFNAGTPTPQMSSCFLMTCKDDSISGIFDTLKNCAC 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGG+GVS+H++R GSYIRGTNG SNG+VPMLRVFN+TARYVDQGGG+RKG+ A+Y
Sbjct: 240 ISKYAGGLGVSIHDVRGRGSYIRGTNGVSNGLVPMLRVFNNTARYVDQGGGRRKGSIAIY 299
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADI FLDL+KN G E RARDLFYALWVPDLFM RV+ N WSL CPNE PGLA
Sbjct: 300 LEPWHADIESFLDLKKNQGNELERARDLFYALWVPDLFMRRVEKNQKWSLMCPNECPGLA 359
Query: 361 DCWGTEFERLYTKYEKE-GKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQN 419
+ WG EF+ LY KYE K + + A+ LW IL Q+ETGTPY+L+KD+ N KSNQQ+
Sbjct: 360 NVWGKEFDALYEKYEASPNKVRATLDARKLWNHILDVQVETGTPYILYKDSVNAKSNQQH 419
Query: 420 LGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRY 479
LG IKSSNLCTE+++YTSP E AVCNLASI L +R HP + Y
Sbjct: 420 LGVIKSSNLCTEIVEYTSPDEIAVCNLASINLSSVIR--------HPY-------TAEAY 464
Query: 480 FDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFD 539
D+ L + G + NLN++ID NYYPV AR SN++HRP+GIGVQG AD I+L P+D
Sbjct: 465 VDYTALVGLAGSLVRNLNRVIDKNYYPVPEARASNMKHRPVGIGVQGFADALIMLRKPYD 524
Query: 540 STEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWD 599
S EA +N ++FE+IYY AL+ S + A G +E++ GSP+S+G Q D+WGV P+D +D
Sbjct: 525 SPEAAAINVNLFESIYYGALKASLQEAQLYGRHESFPGSPLSQGRFQFDLWGVQPTDTYD 584
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR I ++GVRNSLL APMPTAST+QILGNNE FEP+T+N+Y+RRVL+GEF VVNKH
Sbjct: 585 WNTLRASIVEHGVRNSLLCAPMPTASTAQILGNNESFEPFTTNVYNRRVLAGEFPVVNKH 644
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
LL DLT + LW +KN+++ +GSVQ I +IP +K +YKTVWEI Q+ ++D A DRG
Sbjct: 645 LLKDLTSLDLWDDEMKNQLLLHNGSVQNIARIPRWVKDLYKTVWEIPQRVILDHAADRGP 704
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
Y+ SQS+NIHM +P KLTS+ FH W RGLKTGMYYLR+R AD+I+F VD
Sbjct: 705 YVCQSQSMNIHMAEPTRAKLTSMLFHGWKRGLKTGMYYLRTRPRADSIQFGVD 757
>gi|312066374|ref|XP_003136240.1| ribonucleoside-diphosphate reductase large subunit [Loa loa]
Length = 1038
Score = 939 bits (2428), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 460/825 (55%), Positives = 574/825 (69%), Gaps = 94/825 (11%)
Query: 2 YVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAA 61
YVVKRDG+ EAV FDKI R+ KL YGLS + D + +SQKV G+YKGVTT +LD LAA
Sbjct: 12 YVVKRDGRHEAVSFDKIARRIMKLCYGLSQDRVDHIEISQKVIAGLYKGVTTVELDNLAA 71
Query: 62 ETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVY 121
E AA M T HPDYA+LA+RI VSNLHK T+K FS+ K +YN + +SG PLI+ +++
Sbjct: 72 EIAADMITKHPDYATLASRIAVSNLHKKTEKLFSKVSKRLYNATHPKSGRHMPLISKNIF 131
Query: 122 DIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKD 181
DII NA LDS II++RDF Y YFG KTLERSYLL++ G++ ERPQHMLMRVA+GIH D
Sbjct: 132 DIIQNNADILDSAIIHERDFCYTYFGLKTLERSYLLQINGELAERPQHMLMRVALGIHGD 191
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAII 241
+I++A++TY++MS+RWFTHA+PTLFN+GT Q+SSCFL+ M DDSIEGI++TLK+CA+I
Sbjct: 192 NIEAALETYNLMSERWFTHATPTLFNSGTCTPQMSSCFLLTMFDDSIEGIFETLKKCALI 251
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SKSAGGIG++VH IRATGS I GTNG SNG+VPMLRVFN+ A
Sbjct: 252 SKSAGGIGLNVHCIRATGSAIAGTNGVSNGLVPMLRVFNNAA------------------ 293
Query: 302 EPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLAD 361
RKN G E R RDLF+ LWVPDLFMERV+ + +WSL CP E PGL D
Sbjct: 294 -------------RKNVGDELERCRDLFFGLWVPDLFMERVRDDKVWSLMCPAECPGLED 340
Query: 362 CWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG 421
WG FE+LY +YE+EG+ +K V A+ LW I+ +QIETG PYM++KDTCN+K+NQQNLG
Sbjct: 341 SWGEAFEKLYMQYEEEGRYRKQVPARKLWETIVSTQIETGMPYMVYKDTCNRKTNQQNLG 400
Query: 422 TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFD 481
TIK SNLCTEV+ Y+S E AVCNLASIAL R+V S FD
Sbjct: 401 TIKCSNLCTEVVLYSSREEIAVCNLASIALSRFV-------------------SSEMTFD 441
Query: 482 FEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDST 541
F+ L E+T +V NLNK+ID NYYPV A RSN RHRPIGIGVQGLAD FIL+ PF S
Sbjct: 442 FKMLREITKVVVRNLNKVIDRNYYPVPEAERSNKRHRPIGIGVQGLADAFILMRYPFTSE 501
Query: 542 EAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWG 601
+A+ LNK IFET+YY AL S E+A +GPYE+Y SP ILQ DMWGV P+++WDW
Sbjct: 502 KARDLNKRIFETMYYAALEASCELAMEQGPYESYERSP----ILQFDMWGVTPTNQWDWE 557
Query: 602 GLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFV------- 654
LR I+ G+RNSLL+APMPTAST+QILGNNE EPYTSN+Y+R VLSG F
Sbjct: 558 TLRKKIAMYGIRNSLLLAPMPTASTAQILGNNESIEPYTSNVYTRNVLSGSFQVKFHDTL 617
Query: 655 ---------------------------------VVNKHLLHDLTEMGLWSPIIKNKIIYD 681
V N HL++DL + LW +K +II +
Sbjct: 618 LIRFERITSEITFLQSFLLIAFLCLEDYVISLKVFNMHLMNDLMRLDLWDDDMKLEIIKN 677
Query: 682 DGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTS 741
GS++ I +IP+E++ +YKTVWE+ Q+ ++DMAVDRG +IDHSQSLNI + +PN+G +TS
Sbjct: 678 KGSIRNIERIPQEIRDLYKTVWEMSQRDIIDMAVDRGAFIDHSQSLNIFIARPNYGNITS 737
Query: 742 LHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDD 786
+HF+ W +GLKTGMYYLR+R A DA++FTVD + LK+ DD
Sbjct: 738 MHFYGWQKGLKTGMYYLRTRPAVDAVQFTVDKTRLKDYANANADD 782
>gi|18640128|ref|NP_570202.1| SPV042 ribonucleotide reductase large chain [Swinepox virus]
gi|18448535|gb|AAL69781.1| SPV042 ribonucleotide reductase large chain [Swinepox virus]
Length = 757
Score = 939 bits (2426), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/774 (57%), Positives = 574/774 (74%), Gaps = 21/774 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KR GK+E + +KIT R+ L Y L D ++ ++ G+Y + T +D A
Sbjct: 1 MYVIKRSGKKELLSIEKITKRIDNLCYDLDKNFIDANYLANEIIKGLYNNIRTKDIDTFA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
+E A T H DY +LA+RIVVS LHK T +SFS+ I +YN+ N +G P++++ +
Sbjct: 61 SELIAGFITRHYDYDTLASRIVVSKLHKETTESFSDVIHTLYNYINPNNGNHLPMVSEYL 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y + K+ +D+ I YDRD+ Y YFG KTLE+SYLLK K++ERPQHMLMRV++GIH
Sbjct: 121 YQQVNKHRDIIDNVIAYDRDYSYSYFGIKTLEKSYLLKQNNKIIERPQHMLMRVSLGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DID I+TY+ +S++WF HASPTLFNAGTP Q+SSCF++ +KDDSIEGI+DTLK+CA+
Sbjct: 181 GDIDDVIETYNYLSEKWFIHASPTLFNAGTPLPQMSSCFILPIKDDSIEGIFDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA G+YI G NG SNGIVPMLR++N+T RY++QGG KR GA ++Y
Sbjct: 241 ISKHAGGIGLSISNIRAKGTYISGINGKSNGIVPMLRIYNNTVRYINQGGDKRPGAMSIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWHADIF+FL LRKN G EE+R +DLF ALWVPDLFMERV+ + WSL CP E PGL
Sbjct: 301 IEPWHADIFDFLSLRKNVGNEEYRTKDLFTALWVPDLFMERVEKDEEWSLMCPCECPGLC 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG +F +LY +YE + K K +V+A++LW I+++QIE GTPY+L+KD+CNKKSNQ NL
Sbjct: 361 DVWGNDFNKLYIEYETKKKIKAIVKARSLWKSIIEAQIEQGTPYILYKDSCNKKSNQSNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLCTE+IQ+++ E AVCNL SI+L ++V N F
Sbjct: 421 GTIRSSNLCTEIIQFSNEDEVAVCNLGSISLSKFV--------------------NNNVF 460
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
F+KL +T I+ +NLNKIID+NYYPV + RSN +HRPIGIGVQGLAD FILLG FDS
Sbjct: 461 MFDKLRIITKILVKNLNKIIDINYYPVIESSRSNKKHRPIGIGVQGLADVFILLGYAFDS 520
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+ LN IFETIYY AL +S E+A GPYETY+ SP SKGILQ DMW NP+D WDW
Sbjct: 521 EEAKILNIQIFETIYYAALESSCELAKIYGPYETYNDSPASKGILQYDMWLKNPTDLWDW 580
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+ +G+RNSLL+APMPTASTSQIL NNE EPYTSNIY+RRVLSG+F VVN HL
Sbjct: 581 NELKKRINTHGLRNSLLIAPMPTASTSQILSNNESIEPYTSNIYTRRVLSGDFQVVNPHL 640
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L +L +W+ IKN I+ +GS+Q + +P+ +K IYKTVWEI QK +++MA DRG +
Sbjct: 641 LRELISRNMWNNDIKNTIVLHNGSIQHL-DLPDNIKQIYKTVWEISQKCILEMAADRGAF 699
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTS 774
ID SQS+ I++D P + KLTS+HF+ W GLKTGMYY+R+++A++ IKFTV+ S
Sbjct: 700 IDQSQSMTIYIDNPTYAKLTSMHFYGWRLGLKTGMYYMRTKSASNPIKFTVECS 753
>gi|406604711|emb|CCH43846.1| ribonucleoside-diphosphate reductase subunit M1 [Wickerhamomyces
ciferrii]
Length = 833
Score = 937 bits (2421), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/773 (56%), Positives = 581/773 (75%), Gaps = 16/773 (2%)
Query: 3 VVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAE 62
+ K DG ++ +K+ LK LS GL H + + KV G+ VTT QL +LA+E
Sbjct: 6 IQKSDGSKQRFQLEKLINTLKNLSKGLDTNHINFEELGNKVFNGLPDEVTTDQLIDLASE 65
Query: 63 TAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYD 122
T A +TT HPD+A LA+R+ V+ L KN FSE + ++N YN+++ +PLI++ VY
Sbjct: 66 TLATLTTLHPDHAILASRLSVTRLSKNIPSKFSECTEKLWNFYNKKTKSHSPLISEKVYK 125
Query: 123 IIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDD 182
I+ +N LDS I +RD + +FG +TL++SYLLK+ G E PQ M +RV++GIH DD
Sbjct: 126 IVQENKDLLDSVIDSERDLSFTFFGLETLKKSYLLKINGIWAETPQFMYLRVSLGIHGDD 185
Query: 183 IDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIIS 242
+DSAI+TY++MSQ++F HASPTLFN+GTP A LSSCFL+ + +DSI+GIY TL CA+IS
Sbjct: 186 LDSAIETYNLMSQKYFIHASPTLFNSGTPNAYLSSCFLLGIDEDSIDGIYGTLHRCALIS 245
Query: 243 KSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLE 302
K+AGGIG+ V NIR++GSYI GTNGTSNG+VPMLRV+N+TARYVDQGG KR GAFAVY+E
Sbjct: 246 KAAGGIGIHVSNIRSSGSYIAGTNGTSNGLVPMLRVYNNTARYVDQGGNKRPGAFAVYVE 305
Query: 303 PWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADC 362
PWH+DIFEFLDLRKNHGKEE RARDLFYALW+PDLFM+ V+ + W LF PNEA GL D
Sbjct: 306 PWHSDIFEFLDLRKNHGKEEMRARDLFYALWIPDLFMKAVKEDDDWHLFSPNEAKGLTDV 365
Query: 363 WGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGT 422
+G +FE+LY +Y KEG A + V+AQ LW+ IL+SQ ETG P+ML+KD CN KSNQ+NLGT
Sbjct: 366 YGEDFEKLYEQYVKEGLATRTVKAQKLWYAILESQTETGGPFMLYKDACNIKSNQKNLGT 425
Query: 423 IKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDF 482
IKSSNLC EV++Y+S E AVCNLAS+ALP YV S+ ++ +F+F
Sbjct: 426 IKSSNLCCEVVEYSSKDEVAVCNLASVALPSYV--------SYEDNIM--------WFNF 469
Query: 483 EKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTE 542
KL +V +VT NLNK+IDV YP+ A SNL+HRPI +GVQGLAD F+ L +PF+S+E
Sbjct: 470 NKLHDVVKVVTRNLNKVIDVGKYPIPEAENSNLKHRPIAVGVQGLADLFMELRLPFESSE 529
Query: 543 AQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGG 602
A+ LN IFETIY+ ++ S E+A ++G Y+++ GSP S+G LQ D+W P+D +DW
Sbjct: 530 AKLLNIQIFETIYHASVEASIELAQKDGAYKSFIGSPASQGQLQFDLWNHKPTDLYDWDA 589
Query: 603 LRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLH 662
L+ + +G+RNSLLVAPMPTASTSQILG ECFEP TSN+YSRRVLSGEF +VNK+L+
Sbjct: 590 LKAKVRAHGLRNSLLVAPMPTASTSQILGFTECFEPLTSNVYSRRVLSGEFQIVNKYLIK 649
Query: 663 DLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYID 722
DL ++G+W +KN+I+ +GS+Q I IP+E+K +YKTVWEI QK ++++A DR +ID
Sbjct: 650 DLIDLGIWDLNLKNQIVDSNGSIQDIKTIPQEIKELYKTVWEISQKNIINLAADRAPFID 709
Query: 723 HSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSV 775
SQS+NIH+ +P KLTS+HF+ W +GLKTGMYYLR++AA++AIKFT+D S+
Sbjct: 710 QSQSMNIHIKEPTMRKLTSMHFYGWSKGLKTGMYYLRTQAASEAIKFTIDRSL 762
>gi|91080435|ref|XP_968743.1| PREDICTED: similar to AGAP010198-PA [Tribolium castaneum]
gi|270005755|gb|EFA02203.1| hypothetical protein TcasGA2_TC007860 [Tribolium castaneum]
Length = 798
Score = 935 bits (2417), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 458/811 (56%), Positives = 587/811 (72%), Gaps = 23/811 (2%)
Query: 2 YVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAA 61
YV+KRDG++E VHFDKIT+R++KL Y L+++ DPV ++ KV G+Y GVTT +LD LAA
Sbjct: 7 YVLKRDGRKEEVHFDKITSRIQKLCYRLNMDIVDPVSITLKVIGGLYPGVTTVELDTLAA 66
Query: 62 ETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVY 121
ETA M +HPDYA+LAARI VSNL K TKK FS+ I D+Y+ + ++G K PLI+D Y
Sbjct: 67 ETAIVMGADHPDYATLAARIAVSNLQKQTKKHFSDVISDLYHAVDPQTGEKTPLISDQHY 126
Query: 122 DIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKD 181
+IIMKNA+RL+S I+YDRDF Y+YF FK LERSYL K+ GK VERPQHMLMRVAVGIH +
Sbjct: 127 EIIMKNASRLNSCIVYDRDFSYNYFAFKLLERSYLFKINGKTVERPQHMLMRVAVGIHGE 186
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAII 241
DIDSAI+TY+ MS+ +F H+S TL AGTP L S + + M DDS+EGIY+ + C I
Sbjct: 187 DIDSAIETYNYMSEGYFIHSSATLLTAGTPYPYLPSTYSIAMPDDSLEGIYECISNCIKI 246
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
S + G I V + NIRA G+ I GTNG SNG+VPMLRVFN++A ++++ + A++L
Sbjct: 247 SNTTGRISVHIQNIRAKGTEIAGTNGVSNGLVPMLRVFNNSA-WLNRQSENQPSNQAIFL 305
Query: 302 EPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLAD 361
EPWHADI +FL+L++ GK+E+RARDL YALWVPDLFM RV+++ WSL CP++A GL +
Sbjct: 306 EPWHADILDFLNLKRTTGKDEYRARDLQYALWVPDLFMHRVKNDEKWSLMCPHQAQGLPN 365
Query: 362 CWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG 421
CWG EFE+LY KYE EG+ K + A+++W I SQ+ETG+PY+L+KD CNKKSNQQNLG
Sbjct: 366 CWGQEFEKLYEKYESEGRFVKQIPARDVWRAICVSQMETGSPYILYKDACNKKSNQQNLG 425
Query: 422 TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFD 481
TIKSS+L TE IQY+S E A C AS+AL +V +N Y D
Sbjct: 426 TIKSSSLSTESIQYSSSDEIAACITASVALNMFVNP-----------------ERNGY-D 467
Query: 482 FEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDST 541
FEKL +V +T+NLNK IDV+ YP AR SNLRHRPIGIGVQGLADTFILL MPF+S
Sbjct: 468 FEKLKQVVKTLTKNLNKAIDVSAYPSPEARTSNLRHRPIGIGVQGLADTFILLRMPFESP 527
Query: 542 EAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWG 601
EA+ LN IFET+YY AL SSEIA R+GPY TY GSP+S+G LQ DMWGV P+ WDW
Sbjct: 528 EARSLNVQIFETLYYAALEASSEIAERDGPYSTYDGSPLSQGRLQYDMWGVEPTKLWDWV 587
Query: 602 GLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
L+ I+K+GVRNSLLVA +PT ST+QILGNN+ EPY SN+ RRV S EF VN+HLL
Sbjct: 588 ALKQRIAKHGVRNSLLVALIPTISTAQILGNNQSIEPYLSNVQVRRVNSSEFRDVNQHLL 647
Query: 662 HDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYI 721
DLTE GLW+ +K ++I +GSVQ I IP++LK IYKTVWEI QK +++MA DRG +I
Sbjct: 648 KDLTERGLWTSDLKQEVIERNGSVQNIAGIPDDLKCIYKTVWEIPQKIVIEMAADRGAFI 707
Query: 722 DHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFT-VDTSVLKENP 780
D SQ++N+H+ P++ ++S+HF+ W +GLKTGMY LR+ + SV++EN
Sbjct: 708 DQSQAMNVHIGAPSYAVMSSMHFYGWQKGLKTGMYNLRTNPVSVVQNGNRSKVSVVQENG 767
Query: 781 KVTDD---DDAKMAQMVCSLTNREECMACGS 808
+ +DD + A + CSL N C C +
Sbjct: 768 EKSDDMKKSPEEDAALQCSLQNPGACEMCSA 798
>gi|163955126|ref|YP_001648230.1| hypothetical protein OsV5_153r [Ostreococcus virus OsV5]
gi|163638575|gb|ABY27934.1| hypothetical protein OsV5_153r [Ostreococcus virus OsV5]
Length = 747
Score = 929 bits (2402), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/772 (57%), Positives = 571/772 (73%), Gaps = 33/772 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M VVKR G+ E + FD IT R+K L+YGLS ++CD V+Q+V + +Y G+ ++D L+
Sbjct: 1 MRVVKRSGRIEDMKFDNITNRIKNLTYGLS-KNCDSSKVAQQVASSLYDGIAAQEIDTLS 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE M T+ PDY LA RIV SN+ K +F +K + KA ++ ++V
Sbjct: 60 AEVCVGMITSDPDYEILATRIVASNIQKVCPNNFHIAMKKL---------AKAGIVTEEV 110
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
I A R+ +I+ RD+D+ YFG KTLE+SYL ++ G ++E PQ+M MRV++GIH
Sbjct: 111 ARI----AVRVRDDIVTKRDYDFGYFGLKTLEKSYLQRLDGILMETPQYMFMRVSIGIHG 166
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI + ++TY MSQ F HA+PTLFNAGTPR Q+SSCFL+ K DSI+GIY +L ECA
Sbjct: 167 EDIPAVLETYDKMSQGMFIHATPTLFNAGTPRPQMSSCFLIANKGDSIDGIYGSLTECAQ 226
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+ +H++RA S IRGTNG S+GI+PMLRVFN TARYV+Q G +RKG+ AVY
Sbjct: 227 ISKWAGGIGMHIHDVRANKSRIRGTNGQSDGIIPMLRVFNATARYVNQAG-RRKGSIAVY 285
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADI +FL+LR N G EE R RDLF ALW+PDLFM+RV+ G WSLFCP++APGL+
Sbjct: 286 LEPWHADIMDFLELRLNQGDEEARCRDLFSALWIPDLFMKRVEEGGQWSLFCPDKAPGLS 345
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ G EFE LYTKYE+EG+A V A ++W ILKSQ ETGTPYML+KD CN KSNQ+NL
Sbjct: 346 EAVGEEFEALYTKYEEEGRANATVPAADVWKAILKSQTETGTPYMLYKDACNTKSNQKNL 405
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I+YT ET+VCNLASIALP+YV E + R F
Sbjct: 406 GTIKSSNLCTEIIEYTDKDETSVCNLASIALPKYVNE------------------ETRSF 447
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D+EKL E+T +VT+NLN++ID N+YPVETAR+SN+RHRPIG+GVQGLAD FIL + FDS
Sbjct: 448 DYEKLHEITKVVTKNLNRVIDRNFYPVETARKSNMRHRPIGLGVQGLADVFILCRLAFDS 507
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+ +N IFET+Y+ AL SSE+A EGPYET+ GSP S+GILQ DMW +DW
Sbjct: 508 DEAKAMNARIFETMYHAALEASSELAEVEGPYETFEGSPASQGILQFDMWQGETKLNYDW 567
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I + G+RNSLL+APMPTAST+QILGNNECFEPYT+NIY RR L+GEFVVVNKHL
Sbjct: 568 DALKERIREKGLRNSLLMAPMPTASTAQILGNNECFEPYTTNIYLRRTLAGEFVVVNKHL 627
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
+ DL ++GLWS +K+ ++ GS+Q I IP+++K +Y+TVWEIK K ++DMA DRG +
Sbjct: 628 VEDLKKIGLWSKDMKDLMVKAGGSIQNIVDIPDDIKNLYRTVWEIKMKDVIDMAADRGRF 687
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
ID SQS+N+ M+ P KL+S+H +AW +GLKTGMYYLRS+A A I+F+++
Sbjct: 688 IDQSQSMNLFMESPTLSKLSSMHMYAWKQGLKTGMYYLRSKAKARPIQFSLE 739
>gi|388548927|gb|AFK66128.1| ribonucleoside diphosphate reductase [Ostreococcus lucimarinus
virus OlV3]
Length = 747
Score = 929 bits (2400), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/772 (57%), Positives = 571/772 (73%), Gaps = 33/772 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M VVKR G+ E + FD IT R+K L+YGLS E+CD V+Q+V + +Y G+T ++D L+
Sbjct: 1 MRVVKRSGRIEDMKFDNITNRIKNLTYGLS-ENCDSSKVAQQVASSLYDGITVQEIDTLS 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE + T+ PDY LA RI SN+ K +F ++K + KA ++ ++V
Sbjct: 60 AEVCIGLITSDPDYEILATRITASNIQKVCPNNFHISMKKL---------AKAGIVTEEV 110
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
I A R+ +I RD+D+ YFG KTLE+SYL ++ G ++E PQ+M MRVA+GIH
Sbjct: 111 ARI----AGRVRDDIDTKRDYDFGYFGLKTLEKSYLQRLDGILMETPQYMFMRVAIGIHG 166
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DIDS ++TY MSQ F HA+PTLFNAGTPR Q+SSCFL+ K+DSI GIY TL ECA
Sbjct: 167 EDIDSVLETYDKMSQGMFIHATPTLFNAGTPRPQMSSCFLIANKEDSINGIYGTLTECAQ 226
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+ +H++RA S IRGTNG S+GI+PMLRVFN TARYV+Q G +RKG+ AVY
Sbjct: 227 ISKWAGGIGMHIHDVRANKSRIRGTNGQSDGIIPMLRVFNATARYVNQAG-RRKGSIAVY 285
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADI EFL+LR N G EE R RDLF +LW+PDLFM+RV+ G WSLFCP++APGL+
Sbjct: 286 LEPWHADIMEFLELRLNQGDEEARCRDLFSSLWIPDLFMKRVEEGGQWSLFCPDKAPGLS 345
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D G EFE LYTKYE EG+A +V A ++W ILKSQ ETGTPYML+KD CNKKSNQ+NL
Sbjct: 346 DAVGEEFEALYTKYEAEGRANAIVPAADVWKAILKSQTETGTPYMLYKDACNKKSNQKNL 405
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+++YT ETAVCNLASIALP+YV E + R F
Sbjct: 406 GTIKSSNLCTEILEYTDKDETAVCNLASIALPKYVNE------------------ETRTF 447
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D+EKL E+T IVT+NLN++ID N+YPVETAR+SN+RHRPIG+GVQGLAD FIL FDS
Sbjct: 448 DYEKLHEITKIVTKNLNRVIDRNFYPVETARKSNMRHRPIGLGVQGLADVFILCRYAFDS 507
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+++N IFET+Y+ +L S E+A +G YET+ GSP S+G+LQ DMW +DW
Sbjct: 508 DEAKEMNARIFETMYHASLEASCELAEAQGSYETFEGSPTSQGVLQFDMWEGETKLHYDW 567
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I + G+RNSLL+APMPTAST+QILGNNECFEPYT+NIY RR L+GEFV+VNKHL
Sbjct: 568 DALKERIKEKGLRNSLLMAPMPTASTAQILGNNECFEPYTTNIYLRRTLAGEFVIVNKHL 627
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
++DL ++GLWS +K+ ++ GS+Q I IP+++K +Y+TVWEIK K ++DMA RG +
Sbjct: 628 VNDLKKIGLWSKDMKDLMVKAGGSIQNISDIPDDIKNLYRTVWEIKMKDVIDMAAQRGRF 687
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
ID SQS+N+ M+ P KL+S+H +AW +GLKTGMYYLRS+A A I+F+++
Sbjct: 688 IDQSQSMNLFMESPTMSKLSSMHMYAWKQGLKTGMYYLRSKAKARPIQFSLE 739
>gi|313768342|ref|YP_004062022.1| hypothetical protein MpV1_139c [Micromonas sp. RCC1109 virus MpV1]
gi|312599038|gb|ADQ91062.1| hypothetical protein MpV1_139c [Micromonas sp. RCC1109 virus MpV1]
Length = 749
Score = 928 bits (2399), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/778 (56%), Positives = 571/778 (73%), Gaps = 35/778 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V+KR G+ E + FD +T R+K L+YGLS + CD V+Q+V + +Y +TT ++D L+
Sbjct: 1 MRVIKRSGRIEDMKFDNVTNRIKNLTYGLS-DKCDSSKVAQQVFSSMYDNITTQEIDTLS 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE M T+ PDY +LA RIV SN+ K +F H R KA +I D+V
Sbjct: 60 AEICVGMITSDPDYETLATRIVASNIQKVCPNNF---------HLAMRKLQKAGIITDEV 110
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
++ A ++ I DRDFD+ YFG KTLE+SYL +V GK++E PQ+M MRVA+GIH
Sbjct: 111 VEV----AQQVKEHIKSDRDFDFGYFGLKTLEKSYLQRVDGKLIETPQYMFMRVAIGIHG 166
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D+ SA+ TY+ MSQ F HA+PTLFNAGTPR Q+SSCFL+ K DSI+GIY TL ECA
Sbjct: 167 KDVPSALDTYNKMSQGLFIHATPTLFNAGTPRPQMSSCFLIANKADSIDGIYGTLTECAQ 226
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+ +H+IRA S IRGTNG S+GI+PMLRVFN TARYV+Q G +RKG+ AVY
Sbjct: 227 ISKWAGGIGMHIHDIRANKSRIRGTNGQSDGIIPMLRVFNATARYVNQAG-RRKGSIAVY 285
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DI +FL+LR N G EE R RDLF A+W+PDLFM+RV+ G WSLFCP++A GL+
Sbjct: 286 LEPWHSDIMDFLELRLNQGDEEARCRDLFSAMWIPDLFMKRVEEGGNWSLFCPDKAKGLS 345
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LYTKYE+EG A V A ++W ILKSQ ETGTPYML+KD CN KSNQ+NL
Sbjct: 346 DVYGQEFEDLYTKYEEEGLANATVPAADVWKAILKSQTETGTPYMLYKDACNSKSNQKNL 405
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G IKSSNLCTE+++YT ET+VCNLASIALP+YV + + + F
Sbjct: 406 GVIKSSNLCTEILEYTDKDETSVCNLASIALPKYVNK------------------ETKTF 447
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D++KL E+T VT+NLN++ID N+YPVETARRSN++HRPIG+GVQGLAD FIL G+PFD
Sbjct: 448 DYDKLHEITKTVTKNLNRVIDRNFYPVETARRSNMKHRPIGLGVQGLADVFILCGLPFDC 507
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWG--VNPSDRW 598
E++ +N IFET+Y+ AL SSE+A EG YE++ GSP ++G+LQPDMW S R+
Sbjct: 508 EESRLMNAHIFETMYHAALEASSELAEVEGSYESFKGSPAAEGVLQPDMWDGETKFSGRY 567
Query: 599 DWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNK 658
DW +R+ + G+RNSLL+APMPTAST+QILGNNECFEPYT+NIY RR L+GEFVVVNK
Sbjct: 568 DWDAMRERVKTKGLRNSLLMAPMPTASTAQILGNNECFEPYTTNIYLRRTLAGEFVVVNK 627
Query: 659 HLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRG 718
HL+ DL ++GLWS +K+ ++ GS+Q I IP+++K +YKTVWEI QK ++DMA DRG
Sbjct: 628 HLVDDLKKVGLWSKEMKDLMVKAGGSIQNIVDIPDDIKNLYKTVWEISQKCIIDMAADRG 687
Query: 719 CYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
+ID SQS+N+ M+ P KL+S+H +AW GLKTGMYYLRS+A A I+F+++ +
Sbjct: 688 RFIDQSQSMNLFMESPTLSKLSSMHMYAWKAGLKTGMYYLRSKAKARPIQFSLEPDCM 745
>gi|449277321|gb|EMC85547.1| Ribonucleoside-diphosphate reductase large subunit [Columba livia]
Length = 623
Score = 928 bits (2399), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/642 (68%), Positives = 521/642 (81%), Gaps = 22/642 (3%)
Query: 170 MLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIE 229
MLMRVAVGIHK DID+AI+TY+++S+RWFTHASPTLFNAGT R QLSSCFL+CMKDDSIE
Sbjct: 1 MLMRVAVGIHKHDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLCMKDDSIE 60
Query: 230 GIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQG 289
GIYDTLK CA+ISKSAGGIG++V IRATGSYI GTNG+SNG+VPMLRV+N+TARYVDQG
Sbjct: 61 GIYDTLKHCALISKSAGGIGLAVSCIRATGSYIAGTNGSSNGLVPMLRVYNNTARYVDQG 120
Query: 290 GGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWS 349
G KR GAFA+YLEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV++N WS
Sbjct: 121 GNKRPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWS 180
Query: 350 LFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKD 409
L CPNE PGL + WG EFE+LY YE++G+ ++VV+AQ LW+ I++SQ ETGTPYML+KD
Sbjct: 181 LMCPNECPGLDEVWGDEFEKLYESYERQGRVRRVVKAQQLWYAIIESQTETGTPYMLYKD 240
Query: 410 TCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKL 469
CN+KSNQQNLGTIK SNLCTE+++YTS E AVCNLASIAL YV
Sbjct: 241 ACNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASIALNMYV-------------- 286
Query: 470 VGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
+ +DF+KLAEVT ++ NLNKIID+NYYPV A RSN RHRPIGIGVQGLAD
Sbjct: 287 -----TSEHTYDFKKLAEVTKVIVRNLNKIIDINYYPVPEAERSNRRHRPIGIGVQGLAD 341
Query: 530 TFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDM 589
FIL+ PF+S EAQ+LN+ IFETIYY AL S E+A +GPYETY GSPVSKGILQ DM
Sbjct: 342 AFILMRYPFESPEAQRLNQHIFETIYYGALEASCELAREQGPYETYEGSPVSKGILQYDM 401
Query: 590 WGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL 649
W V PSD WDW L++ I+K GVRNSLL++PMPTAST+QILGNNE EPYTSNIY+RRVL
Sbjct: 402 WNVTPSDLWDWKALKEKIAKYGVRNSLLLSPMPTASTAQILGNNESIEPYTSNIYTRRVL 461
Query: 650 SGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKT 709
SGEF VVN HLL DLTE GLW+ +KN+II +GS+Q IP+IPE+LK +YKTVWEI QKT
Sbjct: 462 SGEFQVVNPHLLKDLTERGLWNEEMKNQIIAHNGSIQNIPEIPEDLKQLYKTVWEISQKT 521
Query: 710 LVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKF 769
++ MA DRG +ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR++ AA+ I+F
Sbjct: 522 ILKMAADRGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTKPAANPIQF 581
Query: 770 TVDTSVLKENPKVTDDDDAKMAQ---MVCSLTNREECMACGS 808
T++ L+E K +++ K MVCSL NREEC+ CGS
Sbjct: 582 TLNKEKLREREKANKEEEEKERNKAAMVCSLENREECLMCGS 623
>gi|314055218|ref|YP_004063556.1| ribonucleoside-diphosphate reductase, alpha subunit [Ostreococcus
tauri virus 2]
gi|313575109|emb|CBI70122.1| ribonucleoside-diphosphate reductase, alpha subunit [Ostreococcus
tauri virus 2]
gi|388548669|gb|AFK65871.1| ribonucleoside diphosphate reductase [Ostreococcus lucimarinus
virus OlV6]
Length = 747
Score = 927 bits (2397), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/772 (57%), Positives = 570/772 (73%), Gaps = 33/772 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M VVKR G+ E + FD IT R+K L+YGLS E+CD V+Q+V + +Y G+T ++D L+
Sbjct: 1 MRVVKRSGRIEDMKFDNITNRIKNLTYGLS-ENCDSSKVAQQVASSLYDGITVQEIDTLS 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE + T+ PDY LA RI SN+ K +F +K + KA ++ ++V
Sbjct: 60 AEVCIGLITSDPDYEILATRITASNIQKVCPNNFHIAMKKL---------AKAGIVTEEV 110
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
I A R+ +I RD+D+ YFG KTLE+SYL ++ G ++E PQ+M MRVA+GIH
Sbjct: 111 ARI----AGRVRDDIDTKRDYDFGYFGLKTLEKSYLQRLDGILMETPQYMFMRVAIGIHG 166
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DIDS ++TY MSQ F HA+PTLFNAGTPR Q+SSCFL+ K+DSI GIY TL ECA
Sbjct: 167 EDIDSVLETYDKMSQGMFIHATPTLFNAGTPRPQMSSCFLIANKEDSINGIYGTLTECAQ 226
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+ +H++RA S IRGTNG S+GI+PMLRVFN TARYV+Q G +RKG+ AVY
Sbjct: 227 ISKWAGGIGMHIHDVRANKSRIRGTNGQSDGIIPMLRVFNATARYVNQAG-RRKGSIAVY 285
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADI EFL+LR N G EE R RDLF +LW+PDLFM+RV+ G WSLFCP++APGL+
Sbjct: 286 LEPWHADIMEFLELRLNQGDEEARCRDLFSSLWIPDLFMKRVEEGGQWSLFCPDKAPGLS 345
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D G EFE LYTKYE EG+A +V A ++W ILKSQ ETGTPYML+KD CNKKSNQ+NL
Sbjct: 346 DAVGEEFEALYTKYEAEGRANAIVPAADVWKAILKSQTETGTPYMLYKDACNKKSNQKNL 405
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+++YT ETAVCNLASIALP+YV E + R F
Sbjct: 406 GTIKSSNLCTEILEYTDKDETAVCNLASIALPKYVNE------------------ETRTF 447
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D+EKL E+T IVT+NLN++ID N+YPVETAR+SN+RHRPIG+GVQGLAD FIL FDS
Sbjct: 448 DYEKLHEITKIVTKNLNRVIDRNFYPVETARKSNMRHRPIGLGVQGLADVFILCRYAFDS 507
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+++N IFET+Y+ +L S E+A +G YET+ GSP S+G+LQ DMW +DW
Sbjct: 508 DEAKEMNARIFETMYHASLEASCELAEAQGSYETFEGSPTSQGVLQFDMWEGETKLNYDW 567
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I + G+RNSLL+APMPTAST+QILGNNECFEPYT+NIY RR L+GEFV+VNKHL
Sbjct: 568 DVLKERIKEKGLRNSLLMAPMPTASTAQILGNNECFEPYTTNIYLRRTLAGEFVIVNKHL 627
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
++DL ++GLWS +K+ ++ GS+Q I IP+++K +Y+TVWEIK K ++DMA RG +
Sbjct: 628 VNDLKKIGLWSKDMKDLMVKAGGSIQNISDIPDDIKNLYRTVWEIKMKDVIDMAAQRGRF 687
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
ID SQS+N+ M+ P KL+S+H +AW +GLKTGMYYLRS+A A I+F+++
Sbjct: 688 IDQSQSMNLFMESPTMSKLSSMHMYAWKQGLKTGMYYLRSKAKARPIQFSLE 739
>gi|260666002|ref|YP_003212956.1| hypothetical protein H665_p133 [Ostreococcus tauri virus 1]
gi|260161020|emb|CAY39721.1| hypothetical protein OTV1_133 [Ostreococcus tauri virus 1]
Length = 747
Score = 927 bits (2397), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 443/772 (57%), Positives = 570/772 (73%), Gaps = 33/772 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M VVKR G+ E + FD IT R+K L+YGLS ++CD V+Q+V + +Y G+ ++D L+
Sbjct: 1 MRVVKRSGRIEDMKFDNITNRIKNLTYGLS-KNCDSSKVAQQVASSLYDGIAAQEIDTLS 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE M T+ PDY LA RIV SN+ K +F +K + KA ++ ++V
Sbjct: 60 AEVCVGMITSDPDYEILATRIVASNIQKVCPNNFHIAMKKL---------AKAGIVTEEV 110
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
I A R+ +I+ RD+D+ YFG KTLE+SYL ++ G ++E PQ+M MRV++GIH
Sbjct: 111 ARI----AGRVRDDIVTKRDYDFGYFGLKTLEKSYLQRLDGILMETPQYMFMRVSIGIHG 166
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI S ++TY MSQ F HA+PTLFNAGTPR Q+SSCFL+ K DSI+GIY +L ECA
Sbjct: 167 EDIPSVLETYDKMSQGMFIHATPTLFNAGTPRPQMSSCFLIANKGDSIDGIYGSLTECAQ 226
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+ +H++RA S IRGTNG S+GI+PMLRVFN TARYV+Q G +RKG+ AVY
Sbjct: 227 ISKWAGGIGMHIHDVRANKSRIRGTNGQSDGIIPMLRVFNATARYVNQAG-RRKGSIAVY 285
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADI +FL+LR N G EE R RDLF ALW+PDLFM+RV+ G WSLFCP++APGL+
Sbjct: 286 LEPWHADIMDFLELRLNQGDEEARCRDLFSALWIPDLFMKRVEEGGQWSLFCPDKAPGLS 345
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ G EFE LYTKYE+EG+A V A ++W ILKSQ ETGTPYML+KD CN KSNQ+NL
Sbjct: 346 EAVGEEFEALYTKYEEEGRANATVPAADVWKAILKSQTETGTPYMLYKDACNTKSNQKNL 405
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+I+YT ET+VCNLASIALP+YV E + R F
Sbjct: 406 GTIKSSNLCTEIIEYTDKDETSVCNLASIALPKYVNE------------------ETRSF 447
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D+EKL E+T +VT+NLN++ID N+YPVETAR+SN+RHRPIG+GVQGLAD FIL + FDS
Sbjct: 448 DYEKLHEITKVVTKNLNRVIDRNFYPVETARKSNMRHRPIGLGVQGLADVFILCRLAFDS 507
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+ +N IFET+Y+ AL SSE+A EGPYET+ GSP S+GILQ DMW +DW
Sbjct: 508 DEAKAMNARIFETMYHAALEASSELAEVEGPYETFEGSPASQGILQFDMWEGETKLNYDW 567
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I G+RNSLL+APMPTAST+QILGNNECFEPYT+NIY RR L+GEFVVVNKHL
Sbjct: 568 DALKERIRGVGLRNSLLMAPMPTASTAQILGNNECFEPYTTNIYLRRTLAGEFVVVNKHL 627
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
+ DL ++GLWS +K+ ++ GS+Q I IP+++K +Y+TVWEIK K ++DMA DRG +
Sbjct: 628 VEDLKKIGLWSKDMKDLMVKAGGSIQNIVDIPDDIKNLYRTVWEIKMKDVIDMAADRGRF 687
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
ID SQS+N+ M+ P KL+S+H +AW +GLKTGMYYLRS+A A I+F+++
Sbjct: 688 IDQSQSMNLFMESPTLSKLSSMHMYAWKQGLKTGMYYLRSKAKARPIQFSLE 739
>gi|343474739|emb|CCD13686.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 842
Score = 927 bits (2396), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 462/852 (54%), Positives = 591/852 (69%), Gaps = 69/852 (8%)
Query: 3 VVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAE 62
V+ R G+ EA +K+ R++ L G+ + + + + V G+Y+ + T +LD+L AE
Sbjct: 14 VINRSGEPEAFDINKLRERVEPLLDGIDLRYVNVTSLIDTVKCGIYENIKTDRLDQLLAE 73
Query: 63 TAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYD 122
TAA T HPDY L R+ V+ LHK T+ E ++MY H + SG APL+++ ++
Sbjct: 74 TAAYSVTKHPDYGLLGGRLAVTALHKTTQGRVLEAFREMYRHNSLTSGRWAPLVSEALWR 133
Query: 123 IIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQ-----GKVVERPQHMLMRVAVG 177
++ N L++ I Y RD ++YFGFKTLE+SYLL+V ++VERPQ M +RVA+G
Sbjct: 134 VVEANHEELENIIDYSRDLRFEYFGFKTLEKSYLLRVDVGHGATRIVERPQLMFLRVALG 193
Query: 178 IHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKE 237
IH +D++ +TY MS +FTHA+PTLFNAGTP Q+SSCFL+ M++DSIEGIYDTLK+
Sbjct: 194 IHGNDLERVKETYDHMSLGYFTHATPTLFNAGTPTPQMSSCFLLAMREDSIEGIYDTLKQ 253
Query: 238 CAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAF 297
CAIISKSAGGIGV VHNIR GSYI GTNGTSNG+VPMLRV N+TARYVDQGGGKRKGAF
Sbjct: 254 CAIISKSAGGIGVHVHNIRCAGSYIAGTNGTSNGLVPMLRVLNNTARYVDQGGGKRKGAF 313
Query: 298 AVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAP 357
AVYLEPWHADI FL L+KN GK++ RARDLFY LW+PDLFMERV+ W+L PN A
Sbjct: 314 AVYLEPWHADILGFLLLKKNTGKDDLRARDLFYGLWIPDLFMERVRQKEKWTLMDPNTAR 373
Query: 358 GLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQ 417
GL+DC+G EF+ LY +YEKEG+ K + A +LWF IL+SQ+ETG P+ML+KD CN KSNQ
Sbjct: 374 GLSDCYGDEFKDLYERYEKEGRGVKTIAAHDLWFAILESQVETGGPFMLYKDACNCKSNQ 433
Query: 418 QNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKN 477
+NLGTIK SNLCTE+++YTS E AVCNLASIALPR + ++
Sbjct: 434 KNLGTIKCSNLCTEILEYTSKDEIAVCNLASIALPRCI--------------------ED 473
Query: 478 RYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMP 537
F +KL +T IVT NLNK+ID+NYYP+E A+RSN+R+RP+GIGVQGLADTF LL +P
Sbjct: 474 GKFSHKKLRNITKIVTRNLNKVIDLNYYPLEEAKRSNMRNRPVGIGVQGLADTFALLSLP 533
Query: 538 FDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMW------- 590
F S A++LN+ IFE IYY A+ TS E+AA +G YET+ SP S+G+LQ D+W
Sbjct: 534 FASIRAKRLNRRIFENIYYAAVETSVELAAEQGKYETFDKSPASEGLLQFDLWDRYVRSE 593
Query: 591 ----------------------GVNPSD--------RWDWGGLRDMISKNGVRNSLLVAP 620
G D R DW GL+ + G+RNSLL+AP
Sbjct: 594 AEVERYKRELEEEDRIDERNRTGGEEKDRVVDDDYERLDWEGLKKRVMSVGMRNSLLIAP 653
Query: 621 MPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIY 680
MPTASTSQILGNNEC EP+TSNIY RRVLSGEF VVNK+L+ L E GLW+ ++NKII
Sbjct: 654 MPTASTSQILGNNECIEPFTSNIYVRRVLSGEFPVVNKYLVRALIEKGLWNDEMRNKIIT 713
Query: 681 DDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLT 740
+GS+ I +IPE+++ +YK VWEI+Q+ L+DMAV RG Y+D SQSLN+ +++P +L+
Sbjct: 714 YNGSISSIKEIPEDIRELYKVVWEIRQRDLIDMAVARGRYVDQSQSLNLFLEKPTSTQLS 773
Query: 741 SLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAK---MAQMVCSL 797
S+HF+ W RGLKTGMYYLRS+ AADAIKFTVD KE K+ D A+ Q SL
Sbjct: 774 SMHFYTWERGLKTGMYYLRSKPAADAIKFTVDP---KEKKKLEDGKRAQQEPQEQGGPSL 830
Query: 798 T-NREECMACGS 808
EC+ CGS
Sbjct: 831 RYGSGECLNCGS 842
>gi|313844113|ref|YP_004061776.1| hypothetical protein OlV1_143 [Ostreococcus lucimarinus virus OlV1]
gi|312599498|gb|ADQ91520.1| hypothetical protein OlV1_143 [Ostreococcus lucimarinus virus OlV1]
Length = 747
Score = 926 bits (2394), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 442/772 (57%), Positives = 569/772 (73%), Gaps = 33/772 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M VVKR G+ E + FD IT R+K L+YGLS E CD V+Q+V + +Y G+T ++D L+
Sbjct: 1 MRVVKRSGRIEDMKFDNITNRIKNLTYGLS-EKCDSSKVAQQVASSLYDGITAQEIDTLS 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE M T+ PDY +LA RI SN+ K +F +K + KA ++ ++V
Sbjct: 60 AEICVGMITSDPDYETLATRITASNIQKVCPNNFHIAMKKL---------AKAGIVTEEV 110
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
I A R+ +I RD+D+ YFG KTLE+SYL ++ G ++E PQ+M MRVA+GIH
Sbjct: 111 ARI----AGRVRDDIDTKRDYDFGYFGLKTLEKSYLQRLDGVLMETPQYMFMRVAIGIHG 166
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DIDS ++TY MS+ F HA+PTLFNAGTPR Q+SSCFL+ K+DSI GIY TL ECA
Sbjct: 167 EDIDSVLETYDKMSRGMFIHATPTLFNAGTPRPQMSSCFLIANKEDSINGIYGTLTECAQ 226
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+ +H++RA S IRGTNG S+GI+PMLRVFN TARYV+Q G +RKG+ AVY
Sbjct: 227 ISKWAGGIGMHIHDVRANKSRIRGTNGQSDGIIPMLRVFNATARYVNQAG-RRKGSIAVY 285
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADI EFL+LR N G EE R RDLF ALW+PDLFM+RV+ +G WSLFCP++APGL+
Sbjct: 286 LEPWHADIMEFLELRLNQGDEEARCRDLFSALWIPDLFMKRVEESGNWSLFCPDKAPGLS 345
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D G EFE LYTKYE+E +A V A ++W ILKSQ ETGTPYML+KD CN+KSNQ+NL
Sbjct: 346 DAVGEEFEALYTKYEEESRATATVPAADVWKAILKSQTETGTPYMLYKDACNQKSNQKNL 405
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G IKSSNLCTE++++T ETAVCNLASIALP+YV + + F
Sbjct: 406 GVIKSSNLCTEILEFTDKDETAVCNLASIALPKYV------------------DPETKTF 447
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D+EKL EVT VT+NLN++ID N+YPVETAR+SN+RHRPIG+GVQGLAD FIL FDS
Sbjct: 448 DYEKLHEVTKTVTKNLNRVIDRNFYPVETARKSNMRHRPIGLGVQGLADVFILCRHAFDS 507
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+++N IFET+Y+ AL SSE+A +GPYET+ GSP S+G+LQ DMW +DW
Sbjct: 508 DEAKEINARIFETMYHAALEASSELAEVDGPYETFEGSPASQGVLQFDMWEGETKLHYDW 567
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I + G+RNSLL+APMPTAST+QILGNNECFEPYT+NIY RR L+GEFV+VNKHL
Sbjct: 568 DALKERIKEKGLRNSLLMAPMPTASTAQILGNNECFEPYTTNIYLRRTLAGEFVIVNKHL 627
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
+ DL E+GLWS +K+ ++ GS+Q I IP+E+K +Y+TVWEIK K ++DMA DRG +
Sbjct: 628 VDDLKEIGLWSKDMKDLMVKAGGSIQNIVDIPDEIKKLYRTVWEIKMKDVIDMAADRGRF 687
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
ID SQS+N+ M+ P KL+S+H ++W +GLKTGMYYLRS+A A I+F+++
Sbjct: 688 IDQSQSMNLFMESPTMSKLSSMHMYSWKKGLKTGMYYLRSKAKARPIQFSLE 739
>gi|342185899|emb|CCC95384.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 842
Score = 925 bits (2391), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 461/852 (54%), Positives = 590/852 (69%), Gaps = 69/852 (8%)
Query: 3 VVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAE 62
V+ R G+ EA +K+ R++ L G+ + + + + V G+Y+ + T +LD+L AE
Sbjct: 14 VINRSGEPEAFDINKLRERVEPLLDGIDLRYVNVTSLIDTVKCGIYENIKTDRLDQLLAE 73
Query: 63 TAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYD 122
TAA T HPDY L R+ V+ LHK T+ E ++MY H + SG APL+++ ++
Sbjct: 74 TAAYSVTKHPDYGLLGGRLAVTALHKTTQGRVLEAFREMYRHNSLTSGRWAPLVSETLWR 133
Query: 123 IIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQ-----GKVVERPQHMLMRVAVG 177
++ N L++ I Y RD ++YFGFKTLE+SYLL+V ++VERPQ M +RVA+G
Sbjct: 134 VVEANHEELENIIDYSRDLRFEYFGFKTLEKSYLLRVDVGHGATRIVERPQLMFLRVALG 193
Query: 178 IHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKE 237
IH +D++ +TY MS +FTHA+PTLFNAGTP Q+SSCFL+ M++DSIEGIYDTLK+
Sbjct: 194 IHGNDLERVKETYDHMSLGYFTHATPTLFNAGTPTPQMSSCFLLAMREDSIEGIYDTLKQ 253
Query: 238 CAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAF 297
CAIISKSAGGIGV VHNIR GSYI GTNGTSNG+VPMLRV N+TARYVDQGGGKRKGAF
Sbjct: 254 CAIISKSAGGIGVHVHNIRCAGSYIAGTNGTSNGLVPMLRVLNNTARYVDQGGGKRKGAF 313
Query: 298 AVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAP 357
AVYLEPWHADI FL L+KN GK++ RARDLFY LW+PDLFMERV+ W+L PN A
Sbjct: 314 AVYLEPWHADILGFLLLKKNTGKDDLRARDLFYGLWIPDLFMERVRQKEKWTLMDPNTAR 373
Query: 358 GLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQ 417
GL+DC+G EF+ LY +YE EG+ K + A +LWF IL+SQ+ETG P+ML+KD CN KSNQ
Sbjct: 374 GLSDCYGDEFKDLYERYEMEGRGVKTIAAHDLWFAILESQVETGGPFMLYKDACNCKSNQ 433
Query: 418 QNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKN 477
+NLGTIK SNLCTE+++YTS E AVCNLASIALPR + ++
Sbjct: 434 KNLGTIKCSNLCTEILEYTSKDEIAVCNLASIALPRCI--------------------ED 473
Query: 478 RYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMP 537
F +KL +T IVT NLNK+ID+NYYP+E A+RSN+R+RP+GIGVQGLADTF LL +P
Sbjct: 474 GKFSHKKLRNITKIVTRNLNKVIDLNYYPLEEAKRSNMRNRPVGIGVQGLADTFALLSLP 533
Query: 538 FDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMW------- 590
F S A++LN+ IFE IYY A+ TS E+AA +G YET+ SP S+G+LQ D+W
Sbjct: 534 FASIRAKRLNRRIFENIYYAAVETSVELAAEQGKYETFDKSPASEGLLQFDLWDRFVRSK 593
Query: 591 ----------------------GVNPSD--------RWDWGGLRDMISKNGVRNSLLVAP 620
G D R DW GL+ + G+RNSLL+AP
Sbjct: 594 AEVERYKRELEEEDQIDERNRTGGEEKDRVVDDDYERLDWEGLKKRVMSVGMRNSLLIAP 653
Query: 621 MPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIY 680
MPTASTSQILGNNEC EP+TSNIY RRVLSGEF VVNK+L+ L E GLW+ ++NKII
Sbjct: 654 MPTASTSQILGNNECIEPFTSNIYVRRVLSGEFPVVNKYLVRALIEKGLWNDEMRNKIIT 713
Query: 681 DDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLT 740
+GS+ I +IPE+++ +YK VWEI+Q+ L+DMAV RG Y+D SQSLN+ +++P +L+
Sbjct: 714 YNGSISSIKEIPEDIRELYKVVWEIRQRDLIDMAVARGRYVDQSQSLNLFLEKPTSTQLS 773
Query: 741 SLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAK---MAQMVCSL 797
S+HF+ W RGLKTGMYYLRS+ AADAIKFTVD KE K+ D A+ Q SL
Sbjct: 774 SMHFYTWERGLKTGMYYLRSKPAADAIKFTVDP---KEKKKLEDGKRAQQEPQEQGGPSL 830
Query: 798 T-NREECMACGS 808
EC+ CGS
Sbjct: 831 RYGSGECLNCGS 842
>gi|150864273|ref|XP_001383025.2| ribonucleoside-diphosphate reductase alpha subunit [Scheffersomyces
stipitis CBS 6054]
gi|149385529|gb|ABN64996.2| ribonucleoside-diphosphate reductase alpha subunit [Scheffersomyces
stipitis CBS 6054]
Length = 891
Score = 925 bits (2390), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/774 (56%), Positives = 574/774 (74%), Gaps = 20/774 (2%)
Query: 9 KQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMT 68
K+E +++ L KL+ L ++H D + V G+ VT +L L +ET A+ T
Sbjct: 34 KREDFDIKRLSRFLLKLTTNLDVKHLDLDSIVSTVEVGLPAKVTLDELYGLVSETLASRT 93
Query: 69 TNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHY-----NERSGLKAP----LIADD 119
HPDYA LA R+ + K+ SFS + ++NH N +G K ++++
Sbjct: 94 IYHPDYALLAGRVAARRIQKHVSTSFSGAVIKLWNHRSSVTNNRSNGNKTSRTYSIVSES 153
Query: 120 VYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIH 179
+Y I+M++ DS I DRDFD YF KTLERSYLLK+ ++ E PQ+M +RVA+GIH
Sbjct: 154 LYKIVMQHRHFFDSLIEKDRDFDLTYFAIKTLERSYLLKINDEMAETPQYMFLRVAIGIH 213
Query: 180 KDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECA 239
+++D ++TY +MS R+F HASPTLFNAG+ LSSCFLV M+DDSI+GIY TL + A
Sbjct: 214 GNNLDDVVETYELMSSRYFIHASPTLFNAGSEYNYLSSCFLVDMEDDSIDGIYKTLHKTA 273
Query: 240 IISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAV 299
+ISK++GGIG++VHNIRA+GS I TNGTS+G+VPMLRVFNDTARYVDQGG KR GAFA+
Sbjct: 274 LISKASGGIGLNVHNIRASGSLIASTNGTSSGLVPMLRVFNDTARYVDQGGNKRPGAFAI 333
Query: 300 YLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGL 359
Y+EPWHADIF LD++KNHGKEE RARDLF+ALW+PDLFM++V+ + W LF P+EAPGL
Sbjct: 334 YIEPWHADIFSVLDMKKNHGKEELRARDLFFALWIPDLFMQKVKDDEDWCLFSPDEAPGL 393
Query: 360 ADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQN 419
ADC+G EF LY +YE EG+A+ VV+A LW IL+SQ ETG PYML+KD+CN+KSNQ+N
Sbjct: 394 ADCYGDEFVDLYNQYEAEGRARTVVKAHKLWLAILESQTETGGPYMLYKDSCNRKSNQKN 453
Query: 420 LGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRY 479
LGTIKSSNLC E+++Y S ETAVCNL S+ALP +++ V +++ +++
Sbjct: 454 LGTIKSSNLCCEIVEYCSSEETAVCNLGSLALPAFIK--SVSIDNSDEEVLE-------- 503
Query: 480 FDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFD 539
FDFEKL +T ++T NLNK+IDV YPVE+ + SN++HRPI +GVQGLAD F+ L +PF
Sbjct: 504 FDFEKLHSITKVLTRNLNKVIDVTLYPVESTKVSNMKHRPIALGVQGLADVFLELRLPFS 563
Query: 540 STEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRW- 598
S EA++LN IFETIY+ A+ S E+A EGPY ++ GSP SKGILQ D+W PS+ +
Sbjct: 564 SDEAKKLNIQIFETIYHAAVEASVELAMSEGPYNSFEGSPASKGILQFDLWDHKPSELYN 623
Query: 599 DWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNK 658
DW L++ + +G+RNSLLVAPMPTASTSQILG NECFEPYTSN+Y+RRVL+GE+ V NK
Sbjct: 624 DWDSLKESVKTHGLRNSLLVAPMPTASTSQILGYNECFEPYTSNLYTRRVLAGEYQVANK 683
Query: 659 HLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRG 718
+L+ DL ++GLW+ ++NKII D+GS+Q I IP+ELK +YKTVWEI QK ++DMA DRG
Sbjct: 684 YLVKDLIDLGLWNSAVRNKIIVDNGSIQNISSIPQELKELYKTVWEISQKVIIDMAADRG 743
Query: 719 CYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
+ID SQS+NIH+ P FGKLTS HF+ W +GLKTGMYYLR++AA+ AI+FTV+
Sbjct: 744 KFIDQSQSMNIHLQNPTFGKLTSCHFYGWQKGLKTGMYYLRTQAASRAIQFTVN 797
>gi|357542100|gb|AET84860.1| ribonucleotide reductase [Micromonas pusilla virus SP1]
Length = 749
Score = 920 bits (2379), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/774 (57%), Positives = 564/774 (72%), Gaps = 35/774 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V KR G+ E + FD +T R+K L+ GLS E+CD V+Q+V + +Y G+TT ++D L+
Sbjct: 1 MRVTKRSGRIEDMKFDNVTNRIKNLTQGLS-ENCDSTKVAQQVFSSLYDGITTQEIDILS 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE M T+ PDY +LA R+V SN+HK +F H R K +I D+V
Sbjct: 60 AEICIGMITSDPDYETLATRLVASNIHKVCPNNF---------HLAMRKLQKCKIITDEV 110
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
++ A ++ I DRDFD+ YFG KTLE+SYL +V GK+VE PQ+M MRV++GIH
Sbjct: 111 VEV----AQQVKEYIKTDRDFDFGYFGIKTLEKSYLQRVGGKIVETPQYMFMRVSIGIHG 166
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI S + TY MSQ +F HA+PTLFNAGTPR Q+SSCFL+ K+DSI GIY TL ECA
Sbjct: 167 KDIPSVLDTYDKMSQGYFIHATPTLFNAGTPRPQMSSCFLIANKEDSINGIYGTLTECAQ 226
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+ +H+IRA S IRGTNG S+GI+PMLRVFN TARYV+Q G +RKG+ AVY
Sbjct: 227 ISKWAGGIGMHIHDIRANKSRIRGTNGQSDGIIPMLRVFNATARYVNQAG-RRKGSIAVY 285
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADI +FL++R N G +E R RDLF ALW+PDLFM+RV+ G WSLFCP+ A GL+
Sbjct: 286 LEPWHADIMDFLEIRLNQGDDEARCRDLFSALWIPDLFMKRVEEGGKWSLFCPDTAKGLS 345
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LYT+YE+EG A V A ++W ILKSQ ETGTPYML+KD CN KSNQ+NL
Sbjct: 346 DVYGDEFEALYTRYEEEGLATSTVPASDIWKAILKSQTETGTPYMLYKDACNMKSNQKNL 405
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G IKSSNLCTE+I+YT ET+VCNLAS+ALP+YV ++ + F
Sbjct: 406 GVIKSSNLCTEIIEYTDKDETSVCNLASVALPKYV------------------NTETKTF 447
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL EVT VT+NLN++ID N+YPVETAR SNL+HRPIG+GVQGLAD FIL G+ FD
Sbjct: 448 DFAKLHEVTKTVTKNLNRVIDRNFYPVETARNSNLKHRPIGMGVQGLADVFILCGLSFDC 507
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMW--GVNPSDRW 598
E++ LN IFET+Y+ AL SSE+A +G YET+ GSP S+GILQP+MW S +
Sbjct: 508 EESRLLNSHIFETMYHAALEASSELAEIDGSYETFQGSPASQGILQPEMWEGETKFSGLY 567
Query: 599 DWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNK 658
DW +R+ I G+RNSLL+APMPTAST+QILGNNECFEPYT+NIY RR L+GEFVVVNK
Sbjct: 568 DWEAMRERIKTKGLRNSLLMAPMPTASTAQILGNNECFEPYTTNIYLRRTLAGEFVVVNK 627
Query: 659 HLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRG 718
HL++DL ++GLWS +K+ ++ GS+Q I IP+ +K +YKTVWEI QK ++DMA DRG
Sbjct: 628 HLVNDLKKIGLWSKEMKDIMVKAGGSIQNIVDIPDNIKKLYKTVWEISQKCIIDMAADRG 687
Query: 719 CYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
+ID SQS+N+ M+ P KL+S+H +AW GLKTGMYYLRS+A A I+F+++
Sbjct: 688 RFIDQSQSMNLFMESPTMSKLSSMHMYAWKSGLKTGMYYLRSKAKARPIQFSLE 741
>gi|327287998|ref|XP_003228715.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Anolis carolinensis]
Length = 745
Score = 920 bits (2378), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 465/814 (57%), Positives = 587/814 (72%), Gaps = 75/814 (9%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+VVKRDG+ E V FDKIT+R++KL YGL+++ DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVVKRDGRHERVMFDKITSRIQKLCYGLNVDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT HPDYA LAARI VSNLHK TKK FS+ ++D+Y + N + +P+IA +
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYTYVNPHNSKHSPMIAKET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI++ N RL+S IIYDRDF Y+YFGFKTLERSYLLK+ KV ERPQHMLMRV+VGIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINSKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+AI+TY+++S++WFTHASPTLFNAGT R QLSSCFL+CMKDDSIEGIYDTLK CA+
Sbjct: 181 NDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLCMKDDSIEGIYDTLKHCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG++V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGLAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV++N WSL CPNE PGL
Sbjct: 301 LEPWHFDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE+LY YEK+G+ ++VV+AQ LW+ I++SQ ETGTPYML+KD+CN+KSNQQNL
Sbjct: 361 EVWGEEFEKLYESYEKQGRVRRVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YTS E V N + R +G+ ++ + R F
Sbjct: 421 GTIKCSNLCTEIVEYTSNDEAEVSN-------KRHRPIGIGVQGLADAFILMR------F 467
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
FE + LN+ I Y NL + G P+++
Sbjct: 468 PFESPE------AQLLNQQIFETIYYAALEASCNLA-KECG---------------PYET 505
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
E L+K I + Y+ ++ P +D WDW
Sbjct: 506 YEGCPLSKGILQ-------------------YDMWNVVP---------------TDLWDW 531
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K+GVRNSLLVAPMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 532 KALKEKIAKHGVRNSLLVAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 591
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE GLW+ +KN+II +GS+Q IP+IP++LK +YKTVWEI QKT++ MA DRG +
Sbjct: 592 LKDLTERGLWNEEMKNQIIACNGSIQTIPEIPDDLKLLYKTVWEISQKTVLKMAADRGAF 651
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL-KEN 779
ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR++ AA+ I+FT++ L KE
Sbjct: 652 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTKPAANPIQFTLNKEKLNKEK 711
Query: 780 PKVTDDDDAKM-----AQMVCSLTNREECMACGS 808
+ ++++ A MVCSL NR+EC+ CGS
Sbjct: 712 SSIGEEEEEAKKERNKAAMVCSLENRDECLMCGS 745
>gi|378706242|gb|AFC35043.1| hypothetical protein OtV6_135c [Ostreococcus tauri virus RT-2011]
Length = 747
Score = 919 bits (2376), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 438/772 (56%), Positives = 564/772 (73%), Gaps = 33/772 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V+KR G+ E + FD IT R+K L+YGLS E+CD V+Q+V + +Y G+ ++D L+
Sbjct: 1 MRVIKRSGRIEDMKFDNITNRIKNLTYGLS-ENCDSSKVAQQVASSLYDGINVQEIDTLS 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE M T+ PDY +LA RIV SN+ K +F +K + KA ++ ++V
Sbjct: 60 AEVCVGMITSDPDYETLATRIVASNIQKVCPNNFHIAMKKL---------AKAGIVTEEV 110
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+ A + ++I+ RDFD+ YFG KTLE+SYL ++ G ++E PQ+M MRVA+GIH
Sbjct: 111 AHV----AGIVRNDIVTKRDFDFGYFGLKTLEKSYLQRLDGVLMETPQYMFMRVAIGIHG 166
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDI + ++TY MSQ F HA+PTLFNAGTPR Q+SSCFL+ K+DSI GIY TL ECA
Sbjct: 167 DDIPAVLETYDKMSQGLFIHATPTLFNAGTPRPQMSSCFLIANKEDSINGIYGTLTECAQ 226
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+ +H+IRA S IRGTNG S+GI+PMLRVFN TARYV+Q G +RKG+ AVY
Sbjct: 227 ISKWAGGIGMHIHDIRANKSRIRGTNGQSDGIIPMLRVFNATARYVNQAG-RRKGSIAVY 285
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWHADI EFL+LR N G EE R RDLF ALW+PDLFM+RV+ G WSLFCP++APGL+
Sbjct: 286 IEPWHADIMEFLELRLNQGDEEARCRDLFSALWIPDLFMKRVEEGGQWSLFCPDKAPGLS 345
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D G EFE LY KYE EG+A V A +W ILKSQ ETGTPYML+KD CN+KSNQ+NL
Sbjct: 346 DAVGEEFETLYKKYEDEGRANATVPATEVWKAILKSQTETGTPYMLYKDACNQKSNQKNL 405
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+++YT ETAVCNLASIALP+YV + + F
Sbjct: 406 GTIKSSNLCTEILEYTDKDETAVCNLASIALPKYV------------------DREKKTF 447
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D+EKL EVT VT+NLN++ID N+YPVETAR+SN+RHRPIG+GVQGLAD FIL + FDS
Sbjct: 448 DYEKLHEVTKTVTKNLNRVIDRNFYPVETARKSNMRHRPIGLGVQGLADVFILCRLAFDS 507
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+++N IFET+Y+ AL SSE+A +G YET+ GSP S+GI Q DMW +DW
Sbjct: 508 DEAKEINARIFETMYHAALEASSELAEVDGSYETFEGSPASQGIFQFDMWEGETKLHYDW 567
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
+R+ + G+RNSLL+APMPTAST+QILGNNECFEPYT+NIY RR L+GEFV+VNKHL
Sbjct: 568 DAMRERVKTKGLRNSLLMAPMPTASTAQILGNNECFEPYTTNIYLRRTLAGEFVIVNKHL 627
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
+ DL +GLWS +K+ ++ GS+Q I IP+++K +Y+TVWEIK K ++DMA RG +
Sbjct: 628 VDDLKNVGLWSKEMKDLMVKAGGSIQNIVDIPDDIKKLYRTVWEIKMKDVIDMAAQRGRF 687
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
ID SQS+N+ M+ P KL+S+H +AW +GLKTGMYYLRS+A A I+F+++
Sbjct: 688 IDQSQSMNLFMESPTMSKLSSMHMYAWKQGLKTGMYYLRSKAKARPIQFSLE 739
>gi|131840167|ref|YP_001096176.1| unnamed protein product [Cyprinid herpesvirus 3]
gi|84181499|gb|ABC55102.1| hypothetical protein [Cyprinid herpesvirus 3]
gi|109706742|gb|ABG42968.1| ribonucleotide reductase subunit 1 [Cyprinid herpesvirus 3]
gi|129560660|dbj|BAF48955.1| ribonucleotide reductase large subunit [Cyprinid herpesvirus 3]
Length = 806
Score = 919 bits (2374), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 446/821 (54%), Positives = 575/821 (70%), Gaps = 32/821 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
+YV KRDG +E + K+ R+ + G E DP L++QK+ G+ G TS++DEL
Sbjct: 5 IYVTKRDGTKEPLDMAKVVERINEC--GFRSESVDPQLLAQKIEPGIGNGCKTSEIDELL 62
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
A TA+ MTT HPDY+ LAARI V+NLHK T FSE K ++ + N +GL+APLIA
Sbjct: 63 AHTASNMTTTHPDYSKLAARIAVTNLHKLTSPKFSEVCKRLWFNVNPDTGLRAPLIAQKF 122
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y++ K+A RLD+ + + DF Y YFGFKTLERSY+LK +E PQH LMR A+ IH
Sbjct: 123 YEVSQKHAERLDAAVRHHADFGYSYFGFKTLERSYMLKGPEGPIETPQHTLMRCALQIHG 182
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D+ID+ ++TY +S R+FTHASPTLFN+ +P+ QLSSCFL+ MK DS+EGI DT+K CA+
Sbjct: 183 DNIDALLQTYGFLSSRYFTHASPTLFNSCSPKPQLSSCFLLNMKSDSMEGIADTIKSCAL 242
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGG+G+S+ N+R G+YI+GTNG SNGIVP LR+FN R VDQGG KR GA AVY
Sbjct: 243 ISKHAGGLGMSISNLRGKGAYIKGTNGHSNGIVPTLRIFNALERMVDQGGNKRPGALAVY 302
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWH D+F+FL+LRKN G +E R RDLF ALW+PDLFM+RV+ G WSL CP PGL
Sbjct: 303 MEPWHVDVFDFLELRKNTGSDEQRTRDLFQALWIPDLFMQRVKDGGEWSLMCPASCPGLD 362
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE LYT+YE EGKA++ V+A++LW +L +Q+ETG P+ML+KD CN KSN Q+L
Sbjct: 363 EVWGPEFEALYTRYEAEGKARRTVKARDLWNSVLVAQLETGGPFMLYKDACNAKSNHQHL 422
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE++QYT+ E AVCNLAS+AL +VR + + P + +
Sbjct: 423 GTIKCSNLCTEIVQYTNSEEVAVCNLASVALNEFVR---ITIAEDPYE-----------Y 468
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+ LA+V ++T NLNK+ID N+YPV A RSN RHRPIGIGVQGLAD F+++G+PF
Sbjct: 469 DFQLLADVVRMITRNLNKVIDGNFYPVPEAMRSNKRHRPIGIGVQGLADVFMMMGIPFTC 528
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSD---R 597
+A+ +NK IFETIYY AL S ++A R+GPY TY GSPVSKG+LQ DMWG+ D
Sbjct: 529 GKARDMNKMIFETIYYAALDESCKLAQRDGPYPTYEGSPVSKGLLQFDMWGLKREDLSGM 588
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR I ++GVRNSLLV+PMPTAST+QILGN E EP +SN+Y RRVLSGEF VVN
Sbjct: 589 WDWNELRLRIQRHGVRNSLLVSPMPTASTAQILGNTESIEPLSSNLYQRRVLSGEFQVVN 648
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
+HL+ L +GLW+ ++ ++I GSVQ I PE LK IYKT +EI QK L+ MA +R
Sbjct: 649 RHLVEALERLGLWNDNMRTQLIVHKGSVQNIEGFPEHLKPIYKTAYEISQKDLITMAAER 708
Query: 718 GCYIDHSQSLNIHM--DQPNF--GKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDT 773
++D SQSLN+ + D P KLT++H HAW GLKTGMYYLR++AA ++F+V
Sbjct: 709 APFVDQSQSLNLFLCEDDPKLKMKKLTAMHLHAWSSGLKTGMYYLRTKAAVAPVQFSVAP 768
Query: 774 SVLKENPKVTDDDDAKM------AQMVCSLTNREECMACGS 808
V E + +D ++VC N E C C S
Sbjct: 769 EVSAEASRKRRAEDGSAFSKQPKLEVVC---NEEVCTMCSS 806
>gi|224001624|ref|XP_002290484.1| ribonucleoside reductase [Thalassiosira pseudonana CCMP1335]
gi|220973906|gb|EED92236.1| ribonucleoside reductase [Thalassiosira pseudonana CCMP1335]
Length = 811
Score = 917 bits (2371), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 450/833 (54%), Positives = 596/833 (71%), Gaps = 47/833 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV K+DG+ E + +KI RL+ LS LS + ++ + G Y + T ++D LA
Sbjct: 1 MYVTKKDGRLELLDKNKILQRLQSLSTNLSTPYLSLPTLATSILHGTYPNLPTREIDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
+ETAA+M+T HPDY LAARI S HK+T SFS+ + + NE G + +++
Sbjct: 61 SETAASMSTQHPDYGRLAARICASANHKSTPDSFSKAMLLL----NEEGG---GFVNNEI 113
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKV-QGKVVERPQHMLMRVAVGIH 179
D++ + +D I ++RDF+ YFG+KTLERSYLLK+ + +VER Q++ MRVA+GIH
Sbjct: 114 ADLVKRRGKEIDDRIKHERDFEMTYFGYKTLERSYLLKLNEDTIVERIQYLWMRVALGIH 173
Query: 180 -KDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKEC 238
++ +A +TY +MS+ +FTHASPTLF+AGT QLSSCFLV M DDSI GIYDTLK C
Sbjct: 174 CYANLQAAFETYDLMSRGYFTHASPTLFHAGTTHPQLSSCFLVQMSDDSINGIYDTLKRC 233
Query: 239 AIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA 298
A+ISK+AGGIG+ VH IRA G++I+GT G SNG+VPMLRVF+ T+ YVDQGGGKR GAFA
Sbjct: 234 AVISKAAGGIGLCVHKIRARGTFIKGTRGVSNGLVPMLRVFDVTSHYVDQGGGKRPGAFA 293
Query: 299 VYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPG 358
+YLEPWHADIF+ L+L+KNHGKEE RAR+LFY LWVPDLFM+RV+ +G+WSL CP+ PG
Sbjct: 294 IYLEPWHADIFDVLNLKKNHGKEEQRARNLFYGLWVPDLFMKRVEEDGVWSLMCPHRCPG 353
Query: 359 LADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQ 418
L++C G +FE LY KYE +G+ + V+A+ LW IL++QIETGTPY+L+KD NKKSNQQ
Sbjct: 354 LSECHGEKFEELYAKYESDGRYTRQVRARELWAAILEAQIETGTPYLLYKDAANKKSNQQ 413
Query: 419 NLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNR 478
NLGTI+ SNLCTE+IQYT+ E AVCNLASI LP++V GS
Sbjct: 414 NLGTIQCSNLCTEIIQYTNEEEVAVCNLASICLPKFV--------VSDRGNFGSTEGSGA 465
Query: 479 YFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPF 538
YFD E+L +V IVT+NL+K+IDVN YP+E A++SN HRP+GIGV GLADTF+ LG+PF
Sbjct: 466 YFDHEQLHKVAKIVTKNLDKVIDVNQYPIEGAKKSNRSHRPVGIGVSGLADTFLRLGLPF 525
Query: 539 DSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVN----P 594
S EA+ LN+ IFETIY+ +L S+EIA +G YET+ GSP S+G LQ ++WGV+ P
Sbjct: 526 ASEEAKTLNEAIFETIYHASLEASNEIAREKGSYETFAGSPASEGKLQFNLWGVDDVETP 585
Query: 595 SDR-------------------WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNEC 635
S R +DW LR I + G+RNSLLVAPMPTASTSQILG NEC
Sbjct: 586 SHRKDQSALAFQKYSTQVNGGGYDWETLRQNIIEGGLRNSLLVAPMPTASTSQILGVNEC 645
Query: 636 FEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEEL 695
FEP+ SN+Y RRV +GEF++VN HL+ DLT++GLW+ ++N+++ D GSV KI +P+ L
Sbjct: 646 FEPFASNLYVRRVKAGEFIIVNPHLIQDLTDLGLWNQSVRNQLMRDGGSVAKIECVPDRL 705
Query: 696 KAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGM 755
K +YKTVWE+K K ++DMA DRG +ID SQSLN+ + P KLT++HF+AW +GLKTG+
Sbjct: 706 KGLYKTVWEMKMKDVIDMAADRGKFIDQSQSLNLFIADPTVDKLTAMHFYAWKKGLKTGI 765
Query: 756 YYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAKMAQMVCSLTNREECMACGS 808
YYLR+R A +AI++TV+ L P+V DA Q + +L + E C++C +
Sbjct: 766 YYLRTRPAVNAIQYTVEKDAL---PEV----DASPQQNIPTLDDSETCLSCSA 811
>gi|68629683|gb|AAY99446.1| ribonucleotide reductase [Cyprinid herpesvirus 3]
Length = 806
Score = 917 bits (2369), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/821 (54%), Positives = 574/821 (69%), Gaps = 32/821 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
+YV KRDG +E + K+ R+ + G E DP L++QK+ G+ G TS++DEL
Sbjct: 5 IYVTKRDGTKEPLDMAKVVERINEC--GFRSESVDPQLLAQKIEPGIGNGCKTSEIDELL 62
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
A TA+ MTT HPDY+ LAARI V+NLHK T FSE K ++ + N +GL+APLIA
Sbjct: 63 AHTASNMTTTHPDYSKLAARIAVTNLHKLTSPKFSEVCKRLWFNVNPDTGLRAPLIAQKF 122
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y++ K+A RLD+ + + DF Y YFGFKTLERSY+LK +E PQH LMR A+ IH
Sbjct: 123 YEVSQKHAERLDAAVRHHADFGYSYFGFKTLERSYMLKGPEGPIETPQHTLMRCALQIHG 182
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D+ D+ ++TY +S R+FTHASPTLFN+ +P+ QLSSCFL+ MK DS+EGI DT+K CA+
Sbjct: 183 DNXDALLQTYGFLSSRYFTHASPTLFNSCSPKPQLSSCFLLNMKSDSMEGIADTIKSCAL 242
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGG+G+S+ N+R G+YI+GTNG SNGIVP LR+FN R VDQGG KR GA AVY
Sbjct: 243 ISKHAGGLGMSISNLRGKGAYIKGTNGHSNGIVPTLRIFNALERMVDQGGNKRPGALAVY 302
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWH D+F+FL+LRKN G +E R RDLF ALW+PDLFM+RV+ G WSL CP PGL
Sbjct: 303 MEPWHVDVFDFLELRKNTGSDEQRTRDLFQALWIPDLFMQRVKDGGEWSLMCPASCPGLD 362
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE LYT+YE EGKA++ V+A++LW +L +Q+ETG P+ML+KD CN KSN Q+L
Sbjct: 363 EVWGPEFEALYTRYEAEGKARRTVKARDLWNSVLVAQLETGGPFMLYKDACNAKSNHQHL 422
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE++QYT+ E AVCNLAS+AL +VR + + P + +
Sbjct: 423 GTIKCSNLCTEIVQYTNSEEVAVCNLASVALNEFVR---ITIAEDPYE-----------Y 468
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+ LA+V ++T NLNK+ID N+YPV A RSN RHRPIGIGVQGLAD F+++G+PF
Sbjct: 469 DFQLLADVVRMITRNLNKVIDGNFYPVPEAMRSNKRHRPIGIGVQGLADVFMMMGIPFTC 528
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSD---R 597
+A+ +NK IFETIYY AL S ++A R+GPY TY GSPVSKG+LQ DMWG+ D
Sbjct: 529 GKARDMNKMIFETIYYAALDESCKLAQRDGPYPTYEGSPVSKGLLQFDMWGLKREDLSGM 588
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR I ++GVRNSLLV+PMPTAST+QILGN E EP +SN+Y RRVLSGEF VVN
Sbjct: 589 WDWNELRLRIQRHGVRNSLLVSPMPTASTAQILGNTESIEPLSSNLYQRRVLSGEFQVVN 648
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
+HL+ L +GLW+ ++ ++I GSVQ I PE LK IYKT +EI QK L+ MA +R
Sbjct: 649 RHLVEALERLGLWNDNMRTQLIVHKGSVQNIEGFPEHLKPIYKTAYEISQKDLITMAAER 708
Query: 718 GCYIDHSQSLNIHM--DQPNF--GKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDT 773
++D SQSLN+ + D P KLT++H HAW GLKTGMYYLR++AA ++F+V
Sbjct: 709 APFVDQSQSLNLFLCEDDPKLKMKKLTAMHLHAWSSGLKTGMYYLRTKAAVAPVQFSVAP 768
Query: 774 SVLKENPKVTDDDDAKM------AQMVCSLTNREECMACGS 808
V E + +D ++VC N E C C S
Sbjct: 769 EVSAEASRKRRAEDGSAFSKQPKLEVVC---NEEVCTMCSS 806
>gi|424046201|ref|ZP_17783764.1| ribonucleoside-diphosphate reductase, alpha subunit [Vibrio
cholerae HENC-03]
gi|408885458|gb|EKM24175.1| ribonucleoside-diphosphate reductase, alpha subunit [Vibrio
cholerae HENC-03]
Length = 752
Score = 915 bits (2365), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/771 (55%), Positives = 569/771 (73%), Gaps = 33/771 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V+KRDG++E DK+T R + L+ GL +E P+ V+Q V +G+Y G+ +++D
Sbjct: 1 MDVIKRDGRKEKASLDKVTRRAEALADGLKVE---PIAVAQHVVSGLYDGIKVTEIDVFL 57
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA++ T HPDYA LAAR++VS+L K T + T R + +++D
Sbjct: 58 AETAASLATEHPDYAKLAARVMVSSLQKETSGYATAT----------RELSEIGILSDAY 107
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
D + KN L+ I Y RD+ +DYFG+KTLERSYLLKV+ VVERPQ M MRVAV +
Sbjct: 108 VDFVAKNQFALEEMIDYKRDYQFDYFGYKTLERSYLLKVKRVVVERPQDMFMRVAVAVAG 167
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD++ + Y ++S ++THA+PTLFNAG QLSSCFL+ M++DSI GIYDTLK+CA+
Sbjct: 168 DDLEEIRELYDLLSLGYYTHATPTLFNAGCKMQQLSSCFLLAMQEDSINGIYDTLKDCAL 227
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+ +HNIRATG+ I GTNG SNGIVPML+VFN+TARYVDQGGGKRKG+FAVY
Sbjct: 228 ISKSAGGIGLHIHNIRATGAPIIGTNGVSNGIVPMLKVFNETARYVDQGGGKRKGSFAVY 287
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADI FLDLRKNHGKEE RARDLF ALWVPDLFMERV+++ W+LF P+ GL+
Sbjct: 288 LEPWHADIESFLDLRKNHGKEEFRARDLFLALWVPDLFMERVENDAEWTLFSPHNTKGLS 347
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +GTEF + Y +YE+ G K ++A+ L +I++SQ ETGTPYML+KD CN+KSNQ+NL
Sbjct: 348 DLYGTEFTQKYQEYERMGLGVKTIKARQLMTQIIESQAETGTPYMLYKDACNEKSNQKNL 407
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLC E+++ ++P ETA CNLAS+ALP++V + G F
Sbjct: 408 GTIKSSNLCAEIMEVSTPDETAACNLASMALPKFVTDTG--------------------F 447
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL +VT + +NL+++IDVNY+P + +SN HRP+G+G+QGLAD F + +PFDS
Sbjct: 448 DFDKLHQVTKVAIKNLDRVIDVNYHPTDKIEKSNHAHRPVGLGIQGLADVFFKMHLPFDS 507
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA QLN+DI ET+Y+ +L S EIAA++G Y +Y GSP+S G LQ D+WG PS RWDW
Sbjct: 508 EEALQLNRDIAETMYHASLEASCEIAAQKGAYSSYDGSPISHGQLQFDLWGEQPSSRWDW 567
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+++GVRNSLL+A MPTAST+QILGNNE FE TSNIY R+ LSGEF+++NKHL
Sbjct: 568 SQLKRQIAEHGVRNSLLIAQMPTASTAQILGNNEAFEAQTSNIYKRQTLSGEFIIINKHL 627
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
+ DL + GLW+ I++ II ++GSVQ I IP++L+++Y+TVWEI QK ++DM+ R +
Sbjct: 628 VSDLEQRGLWTSKIRDAIILNNGSVQGIDAIPDDLQSVYRTVWEISQKVIIDMSAARAPF 687
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTV 771
+ SQSLN+ + P F ++ ++HF+AW RGLKTGMYYLRS+ + +A+K TV
Sbjct: 688 VCQSQSLNLWLASPTFAQINAMHFYAWKRGLKTGMYYLRSKPSTNAVKVTV 738
>gi|228861716|ref|YP_002854736.1| Rr1 [Euproctis pseudoconspersa nucleopolyhedrovirus]
gi|226425164|gb|ACO53576.1| Rr1 [Euproctis pseudoconspersa nucleopolyhedrovirus]
Length = 769
Score = 913 bits (2359), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 423/781 (54%), Positives = 572/781 (73%), Gaps = 30/781 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
+YV KR+GK+EA+H DKIT++L++LSY L+ E+ DP ++ +V +Y GV+T +LD A
Sbjct: 8 LYVTKRNGKKEALHLDKITSKLQRLSYNLNSEYIDPASITLQVVKTIYPGVSTEELDMHA 67
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
A A M H DYA LA RI+V NLHKN + SF ++ ++ H L++D++
Sbjct: 68 ARETANMAYVHHDYALLAGRIMVDNLHKNVEASFERVVERLHRH---------NLVSDEL 118
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
I+ NA L+S I + D++Y YFG+KTLE YL K++ KV ER QHMLMRVA+G+H
Sbjct: 119 LSIVQDNAITLESRINHSLDYEYKYFGYKTLENGYLKKIEEKVAERIQHMLMRVAIGVHG 178
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI++A +TY +MSQ++FTHASPTLF AGT QLSSCFL+ +++DSI GIY+TL++CA+
Sbjct: 179 RDIENATETYDLMSQKFFTHASPTLFAAGTKLPQLSSCFLLTLREDSITGIYETLRDCAL 238
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK GGIGV+VH++R GS IR T+G ++G+ MLRV+N+ R+VDQGG KRKGA A+Y
Sbjct: 239 ISKFGGGIGVNVHDVRGRGSRIRSTDGIASGLESMLRVYNNAVRHVDQGG-KRKGAMAIY 297
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH D+++FL+L++N G EE +ARDL YALWVPDLFM RV+ +G+WSL CP+ PGL+
Sbjct: 298 LEPWHVDVYDFLNLKRNMGAEEKKARDLLYALWVPDLFMRRVKDDGVWSLMCPDRCPGLS 357
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G +F+ LY +YE+EGK V A++L+ I+++Q+ETGTPYML+KD CN+K+NQ NL
Sbjct: 358 DVYGNQFDELYAQYEREGKQVSQVPARDLFKFIIETQVETGTPYMLYKDACNRKTNQSNL 417
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLC+E+I+Y+ + AVCNLASI + R V +N F
Sbjct: 418 GTIKCSNLCSEIIEYSDADQVAVCNLASICVNRCV--------------------ENGAF 457
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+F+ L +T V +NLNKIIDVN+YP+E AR SNL+HRP+G+G+QGLAD F++L MP++S
Sbjct: 458 NFQTLKRITKTVVKNLNKIIDVNFYPLEEARLSNLKHRPVGVGIQGLADAFVMLRMPYES 517
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+ LN I ETIYY AL S E+A G YE+Y GSP S+GILQ DMW P++ WDW
Sbjct: 518 DEAKLLNTQIAETIYYGALEASCELAKIHGAYESYAGSPASRGILQYDMWNATPTNLWDW 577
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ IS +G+RNSLLVA MPTA+T+QILGNNE FEP+T+N+Y RRVL+G+F V+N HL
Sbjct: 578 SVLKQRISTHGLRNSLLVAYMPTATTAQILGNNESFEPFTNNLYVRRVLAGDFQVINHHL 637
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
+ DL + L+ ++N+II GSVQ+I IPE +K +YKTVWE+K K L++MAVDRG Y
Sbjct: 638 VDDLVALNLYDENMRNEIIAAGGSVQRIASIPEHVKQLYKTVWEMKNKRLIEMAVDRGAY 697
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
D SQS N+ + +P + ++TS+H HAW GLKTGMYYLR++ AADAI+FTVD S L+
Sbjct: 698 TDQSQSFNVFVAEPTYARMTSIHMHAWSSGLKTGMYYLRTKPAADAIQFTVDKSKLRRRQ 757
Query: 781 K 781
K
Sbjct: 758 K 758
>gi|350532635|ref|ZP_08911576.1| ribonucleoside-diphosphate reductase, alpha subunit [Vibrio
rotiferianus DAT722]
Length = 752
Score = 913 bits (2359), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/771 (55%), Positives = 568/771 (73%), Gaps = 33/771 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V+KRDG++E DK+T R + L+ GL +E P+ V+Q+V +G+Y G+ +++D
Sbjct: 1 MDVIKRDGRKEKASLDKVTRRAEALADGLKVE---PIAVAQRVVSGLYDGIKVTEIDVFL 57
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA++ T HPDYA LAAR++VS+L K T + T R + +++D
Sbjct: 58 AETAASLATEHPDYAKLAARVMVSSLQKETSGYATAT----------RELSEIGILSDTY 107
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
D + KN L+ I Y RD+ +DYFG+KTLERSYLLKV+G VVERPQ M MRVAV +
Sbjct: 108 VDFVAKNQFALEDMIDYKRDYQFDYFGYKTLERSYLLKVKGVVVERPQDMYMRVAVAVAG 167
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD++ + Y ++S ++THA+PTLFNAG QLSSCFL+ M++DSI GIYDTLK+CA+
Sbjct: 168 DDLEEIRELYDLLSLGYYTHATPTLFNAGCKMQQLSSCFLLAMQEDSINGIYDTLKDCAL 227
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+ +HNIRATG+ I GTNG SNGIVPML+VFN+TARYVDQGGGKRKG+FAVY
Sbjct: 228 ISKSAGGIGLHIHNIRATGAPIIGTNGVSNGIVPMLKVFNETARYVDQGGGKRKGSFAVY 287
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADI FLDLRKNHGKEE RARDLF ALWVPDLFMERV+++ W+LF P+ GL+
Sbjct: 288 LEPWHADIESFLDLRKNHGKEEFRARDLFLALWVPDLFMERVENDAEWTLFSPHNTKGLS 347
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EF + Y +YE+ G K ++A+ L +I++SQ ETGTPYML+KD CN+KSNQ+NL
Sbjct: 348 DLYGAEFTQKYQEYERMGLGVKTIKARQLMTQIIESQAETGTPYMLYKDACNEKSNQKNL 407
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLC E+++ ++P ETA CNLAS+ALP++V + G F
Sbjct: 408 GTIKSSNLCAEIMEVSTPDETAACNLASMALPKFVTDTG--------------------F 447
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL +VT + +NL+++IDVNY+P + +SN HRP+G+G+QGLAD F + +PFDS
Sbjct: 448 DFDKLHQVTKVAIKNLDRVIDVNYHPTDKIEKSNHAHRPVGLGIQGLADVFFKMHLPFDS 507
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA QLN+DI ET+Y+ +L S EIAA++G Y +Y GSP+S G Q D+W PS RWDW
Sbjct: 508 EEALQLNRDIAETMYHASLEASCEIAAQKGAYSSYDGSPISHGQFQFDLWDEQPSSRWDW 567
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+++GVRNSLL+A MPTAST+QILGNNE FE TSNIY R+ LSGEF+++NKHL
Sbjct: 568 SQLKRQIAEHGVRNSLLIAQMPTASTAQILGNNEAFEAQTSNIYKRQTLSGEFIIINKHL 627
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
+ DL + GLW+ I++ II ++GSVQ I IP++L+++Y+TVWEI QK ++DM+ R +
Sbjct: 628 VSDLEQRGLWTSKIRDAIILNNGSVQGIDAIPDDLQSVYRTVWEISQKVIIDMSAARAPF 687
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTV 771
+ SQSLN+ + P F ++ ++HF+AW RGLKTGMYYLRS+ + +A+K TV
Sbjct: 688 VCQSQSLNLWLASPTFAQINAMHFYAWKRGLKTGMYYLRSKPSTNAVKVTV 738
>gi|444425041|ref|ZP_21220489.1| ribonucleoside-diphosphate reductase subunit alpha [Vibrio
campbellii CAIM 519 = NBRC 15631]
gi|444241651|gb|ELU53172.1| ribonucleoside-diphosphate reductase subunit alpha [Vibrio
campbellii CAIM 519 = NBRC 15631]
Length = 752
Score = 913 bits (2359), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/771 (55%), Positives = 567/771 (73%), Gaps = 33/771 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V+KRDG++E DK+T R + L+ GL +E P+ V+Q+V +G+Y G+ +++D
Sbjct: 1 MDVIKRDGRKEKASLDKVTRRAEALADGLKVE---PIAVAQRVVSGLYDGIKVTEIDVFL 57
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA++ T HPDYA LAAR++VS+L K T + T R + +++D
Sbjct: 58 AETAASLATEHPDYAKLAARVMVSSLQKETSGYATAT----------RELSEIGILSDAY 107
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
D + KN L+ I Y RD+ +DYFG+KTLERSYLLKV+G VVERPQ M MRVAV +
Sbjct: 108 VDFVAKNQFALEEMIDYKRDYQFDYFGYKTLERSYLLKVKGVVVERPQDMFMRVAVAVAG 167
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD++ + Y ++S ++THA+PTLFNAG QLSSCFL+ M++DSI GIYDTLK+CA+
Sbjct: 168 DDLEEIRELYDLLSLGYYTHATPTLFNAGCKMQQLSSCFLLAMQEDSINGIYDTLKDCAL 227
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+ +HNIRATG+ I GTNG SNGIVPML+VFN+TARYVDQGGGKRKG+FAVY
Sbjct: 228 ISKSAGGIGLHIHNIRATGAPIIGTNGVSNGIVPMLKVFNETARYVDQGGGKRKGSFAVY 287
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADI FLDLRKNHGKEE RARDLF ALWVPDLFMERV+++ W+LF P+ GL+
Sbjct: 288 LEPWHADIESFLDLRKNHGKEEFRARDLFLALWVPDLFMERVENDAEWTLFSPHNTKGLS 347
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EF + Y +YE+ G K ++A+ L +I++SQ ETGTPYML+KD CN+KSNQ+NL
Sbjct: 348 DLYGAEFTQKYQEYERMGLGVKTIKARQLMTQIIESQAETGTPYMLYKDACNEKSNQKNL 407
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLC E+++ ++P ETA CNLAS+ALP++V + G F
Sbjct: 408 GTIKSSNLCAEIMEVSTPDETAACNLASMALPKFVTDAG--------------------F 447
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL +VT + +NL+++IDVNY+P + +SN HRP+G+G+QGLAD F + PFDS
Sbjct: 448 DFDKLHQVTKVAIKNLDRVIDVNYHPTDKIEKSNHAHRPVGLGIQGLADVFFKMHFPFDS 507
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA QLN+DI ET+Y+ +L S EIAA++G Y +Y GSP+S G Q D+W PS RWDW
Sbjct: 508 EEALQLNRDIAETMYHASLEASCEIAAQKGAYSSYDGSPISHGQFQFDLWDEQPSSRWDW 567
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+++GVRNSLL+A MPTAST+QILGNNE FE TSNIY R+ LSGEF+++NKHL
Sbjct: 568 SQLKRQIAEHGVRNSLLIAQMPTASTAQILGNNEAFEAQTSNIYKRQTLSGEFIIINKHL 627
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
+ DL + GLW+ I++ II ++GSVQ I IP++L+++Y+TVWEI QK ++DM+ R +
Sbjct: 628 VSDLEQRGLWTSKIRDAIILNNGSVQGIDAIPDDLQSVYRTVWEISQKVIIDMSAARAPF 687
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTV 771
+ SQSLN+ + P F ++ ++HF+AW RGLKTGMYYLRS+ + +A+K TV
Sbjct: 688 VCQSQSLNLWLASPTFAQINAMHFYAWKRGLKTGMYYLRSKPSTNAVKVTV 738
>gi|62084010|emb|CAI72629.1| ribonucleotide reductase, large subunit [Euproctis pseudoconspersa
nucleopolyhedrovirus]
Length = 769
Score = 913 bits (2359), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/781 (54%), Positives = 572/781 (73%), Gaps = 30/781 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
+YV KR+GK+EA+H DKIT++L++LSY L+ E+ DP ++ +V +Y GV+T +LD A
Sbjct: 8 LYVTKRNGKKEALHLDKITSKLQRLSYNLNSEYIDPASITLQVVKTIYPGVSTEELDMHA 67
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
A A M H DYA LA RI+V NLHKN + SF ++ ++ H L++D++
Sbjct: 68 ARETANMAYVHHDYALLAGRIMVDNLHKNVEASFERVVERLHRH---------NLVSDEL 118
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
I+ NA L+S I + D++Y YFG+KTLE YL K++ K+ ER QHMLMRVA+G+H
Sbjct: 119 LSIVQDNAITLESRINHSLDYEYKYFGYKTLENGYLKKIEEKIAERIQHMLMRVAIGVHG 178
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI++A +TY +MSQ++FTHASPTLF AGT QLSSCFL+ +++DSI GIY+TL++CA+
Sbjct: 179 RDIENATETYDLMSQKFFTHASPTLFAAGTKLPQLSSCFLLTLREDSITGIYETLRDCAL 238
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK GGIGV+VH++R GS IR T+G ++G+ MLRV+N+ R+VDQGG KRKGA A+Y
Sbjct: 239 ISKFGGGIGVNVHDVRGRGSRIRSTDGIASGLESMLRVYNNAVRHVDQGG-KRKGAMAIY 297
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH D+++FL+L++N G EE +ARDL YALWVPDLFM RV+ +G+WSL CP+ PGL+
Sbjct: 298 LEPWHVDVYDFLNLKRNMGAEEKKARDLLYALWVPDLFMRRVKDDGVWSLMCPDRCPGLS 357
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G +F+ LY +YE+EGK V A++L+ I+++Q+ETGTPYML+KD CN+K+NQ NL
Sbjct: 358 DVYGNQFDELYAQYEREGKQVSQVPARDLFKFIIETQVETGTPYMLYKDACNRKTNQSNL 417
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLC+E+I+Y+ + AVCNLASI + R V +N F
Sbjct: 418 GTIKCSNLCSEIIEYSDADQVAVCNLASICVNRCV--------------------ENGAF 457
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+F+ L +T V +NLNKIIDVN+YP+E AR SNL+HRP+G+G+QGLAD F++L MP++S
Sbjct: 458 NFQTLKRITKTVVKNLNKIIDVNFYPLEEARLSNLKHRPVGVGIQGLADAFVMLRMPYES 517
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+ LN I ETIYY AL S E+A G YE+Y GSP S+GILQ DMW P++ WDW
Sbjct: 518 DEAKLLNTQIAETIYYGALEASCELAKIHGAYESYAGSPASRGILQYDMWNATPTNLWDW 577
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ IS +G+RNSLLVA MPTA+T+QILGNNE FEP+T+N+Y RRVL+G+F V+N HL
Sbjct: 578 SVLKQRISTHGLRNSLLVAYMPTATTAQILGNNESFEPFTNNLYVRRVLAGDFQVINHHL 637
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
+ DL + L+ ++N+II GSVQ+I IPE +K +YKTVWE+K K L++MAVDRG Y
Sbjct: 638 VDDLVALNLYDENMRNEIIAAGGSVQRIASIPEHVKQLYKTVWEMKNKRLIEMAVDRGAY 697
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
D SQS N+ + +P + ++TS+H HAW GLKTGMYYLR++ AADAI+FTVD S L+
Sbjct: 698 TDQSQSFNVFVAEPTYARMTSIHMHAWSSGLKTGMYYLRTKPAADAIQFTVDKSKLRRRQ 757
Query: 781 K 781
K
Sbjct: 758 K 758
>gi|269963258|ref|ZP_06177591.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269832006|gb|EEZ86132.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 752
Score = 912 bits (2357), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/771 (55%), Positives = 567/771 (73%), Gaps = 33/771 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V+KRDG++E DK+T R + L+ GL +E P+ V+Q+V +G+Y G+ +++D
Sbjct: 1 MDVIKRDGRKEKASLDKVTRRAEALADGLKVE---PIAVAQRVVSGLYDGIKVTEIDVFL 57
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA++ T HPDYA LAAR++VS+L K T + T R + +++D
Sbjct: 58 AETAASLATEHPDYAKLAARVMVSSLQKETSGYATAT----------RELSEIGILSDTY 107
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
D KN L+ I Y RD+ +DYFG+KTLERSYLLKV+G VVERPQ M MRVAV +
Sbjct: 108 VDFAAKNQFALEEMIDYKRDYQFDYFGYKTLERSYLLKVKGVVVERPQDMFMRVAVAVAG 167
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD++ + Y ++S ++THA+PTLFNAG QLSSCFL+ M++DSI GIYDTLK+CA+
Sbjct: 168 DDLEEIRELYDLLSHGYYTHATPTLFNAGCKMQQLSSCFLLAMQEDSINGIYDTLKDCAL 227
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+ +HNIRATG+ I GTNG SNGIVPML+VFN+TARYVDQGGGKRKG+FAVY
Sbjct: 228 ISKSAGGIGLHIHNIRATGAPIIGTNGVSNGIVPMLKVFNETARYVDQGGGKRKGSFAVY 287
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADI FLDLRKNHGKEE RARDLF ALWVPDLFMERV+++ W+LF P+ GL+
Sbjct: 288 LEPWHADIESFLDLRKNHGKEEFRARDLFLALWVPDLFMERVENDAEWTLFSPHNTKGLS 347
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EF + Y +YE+ G K ++A+ L +I++SQ ETGTPYML+KD CN+KSNQ+NL
Sbjct: 348 DLYGAEFTQKYQEYERMGLGVKTIKARQLMTQIIESQAETGTPYMLYKDACNEKSNQKNL 407
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLC E+++ ++P ETA CNLAS+ALP++V + G F
Sbjct: 408 GTIKSSNLCAEIMEVSTPDETAACNLASMALPKFVTDSG--------------------F 447
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL +VT + +NL+++IDVNY+P + +SN HRP+G+G+QGLAD F + +PFDS
Sbjct: 448 DFDKLHQVTKVAIKNLDRVIDVNYHPTDKIEKSNHAHRPVGLGIQGLADVFFKMHLPFDS 507
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA QLN+DI ET+Y+ +L S EIAA++G Y +Y GSP+S G Q D+W PS RWDW
Sbjct: 508 EEALQLNRDIAETMYHASLEASCEIAAQKGAYSSYDGSPISHGQFQFDLWDEQPSSRWDW 567
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+++GVRNSLL+A MPTAST+QILGNNE FE TSNIY R+ LSGEF+++NKHL
Sbjct: 568 SQLKRQIAEHGVRNSLLIAQMPTASTAQILGNNEAFEAQTSNIYKRQTLSGEFIIINKHL 627
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
+ DL + GLW+ I++ II ++GSVQ I IP++L+++Y+TVWEI QK ++DM+ R +
Sbjct: 628 VSDLEQRGLWTSKIRDAIILNNGSVQGIDAIPDDLQSVYRTVWEISQKVIIDMSAARAPF 687
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTV 771
+ SQSLN+ + P F ++ ++HF+AW RGLKTGMYYLRS+ + +A+K TV
Sbjct: 688 VCQSQSLNLWLASPTFAQINAMHFYAWKRGLKTGMYYLRSKPSTNAVKVTV 738
>gi|209171046|ref|YP_002268193.1| agip163 [Agrotis ipsilon multiple nucleopolyhedrovirus]
gi|208436637|gb|ACI28864.1| unknown [Agrotis ipsilon multiple nucleopolyhedrovirus]
Length = 772
Score = 911 bits (2355), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/766 (56%), Positives = 562/766 (73%), Gaps = 32/766 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
+YVVKRDG + V D+ITA ++ L YGL+ E+ DP V+ KV GV GV+T +L+ A
Sbjct: 3 LYVVKRDGSHQEVRLDEITALVQSLCYGLNAEYVDPAAVTVKVVKGVRPGVSTEELNAYA 62
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
A+ AA+MT H DYA LA RI+V NLHK SFSE IK+++ H L++DD+
Sbjct: 63 ADVAASMTYIHYDYALLAGRILVDNLHKRLDSSFSEIIKNLHGH---------GLVSDDL 113
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
I +AA LD+ I ++ DF+Y YFG+KTLE YLLK+ +V ERPQHMLMRVA+GIH
Sbjct: 114 LRISETHAATLDAAIAHELDFEYKYFGYKTLENGYLLKIDNRVAERPQHMLMRVALGIHG 173
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDI+ AI+TY MMSQ+ FTHASPTLF+AGT Q+ SCFL+ ++DDSI+GIY TL +CA
Sbjct: 174 DDIEDAIETYRMMSQKLFTHASPTLFSAGTRIPQMCSCFLLGVRDDSIDGIYRTLGDCAA 233
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK GGIGV+VH +RA GS I TNGT++G+ PM+RVFN+ R+VDQGG KRKGA AVY
Sbjct: 234 ISKYGGGIGVNVHQVRARGSKINSTNGTASGLEPMVRVFNNMVRHVDQGG-KRKGALAVY 292
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWHADI+ L+L++N G E+ +ARDL YALWVPDLFM RV ++ +WSL CP++ PGLA
Sbjct: 293 IEPWHADIYSVLNLKRNMGAEDCKARDLMYALWVPDLFMRRVNADDMWSLMCPHQCPGLA 352
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G EFERLY +YE EG+ ++ V+AQ+L I+++Q+ETG PYMLFKD CN+KSNQQNL
Sbjct: 353 DCYGDEFERLYERYESEGRYRQRVRAQDLHRFIVETQVETGGPYMLFKDACNRKSNQQNL 412
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVR--EMGVPMESHPSKLVGSRGSKNR 478
G IK SNLC E++QY+ ETAVCNLASIA+ R VR EM
Sbjct: 413 GVIKCSNLCAEIVQYSDAEETAVCNLASIAVNRCVRVDEMT------------------- 453
Query: 479 YFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPF 538
+DFEKL +T +V NLNKIID N+YP+ +ARRSN +HRPIG+G+QGLAD F+LL MP+
Sbjct: 454 -YDFEKLKAITKVVVRNLNKIIDRNHYPIASARRSNEKHRPIGVGIQGLADAFVLLRMPY 512
Query: 539 DSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRW 598
+S EA LNK I ETIYY AL S E+A R+G Y T+ GSP S+G+LQ DMW PS W
Sbjct: 513 ESEEAAVLNKQIAETIYYGALEASCELAQRDGSYSTFAGSPASRGVLQYDMWNATPSALW 572
Query: 599 DWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNK 658
DW L+D I +G+RNSLLVA MPTA+T+QILGNNE FEP+TSN+Y RRVL+GEF VVN+
Sbjct: 573 DWQALKDDIRAHGLRNSLLVAYMPTATTAQILGNNESFEPFTSNVYLRRVLAGEFQVVNQ 632
Query: 659 HLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRG 718
+L+ DL ++ +++P I+N I GS+Q I IP+ +K +YKT WE+K K +++MA DR
Sbjct: 633 YLIDDLIKLNVYTPEIRNAIFAHKGSIQNIEGIPDSVKNLYKTAWEMKAKRMIEMAADRN 692
Query: 719 CYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAA 764
+ID SQS N+ + QP + +TS+H ++W GLKTGMYYLR++ AA
Sbjct: 693 AFIDQSQSFNLFVAQPTYAVMTSIHNYSWRCGLKTGMYYLRTKPAA 738
>gi|424032642|ref|ZP_17772059.1| ribonucleoside-diphosphate reductase, alpha subunit [Vibrio
cholerae HENC-01]
gi|408875700|gb|EKM14844.1| ribonucleoside-diphosphate reductase, alpha subunit [Vibrio
cholerae HENC-01]
Length = 752
Score = 911 bits (2354), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/771 (55%), Positives = 567/771 (73%), Gaps = 33/771 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V+KRDG++E DK+T R + L+ GL +E P+ V+Q+V +G+Y G+ +++D
Sbjct: 1 MDVIKRDGRKEKASLDKVTRRAEALADGLKVE---PIAVAQRVVSGLYDGIKVTEIDVFL 57
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA++ T HPDYA LAAR++VS+L K T + T R + +++D
Sbjct: 58 AETAASLATEHPDYAKLAARVMVSSLQKETSGYATAT----------RELSEIGILSDIY 107
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
D + KN L+ I Y RD+ +DYFG+KTLERSYLLKV+G VVERPQ M MRVAV +
Sbjct: 108 VDFVAKNQFALEDMIDYKRDYQFDYFGYKTLERSYLLKVKGVVVERPQDMFMRVAVAVAG 167
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD++ + Y ++S ++THA+PTLFNAG QLSSCFL+ M++DSI GIYDTLK+CA+
Sbjct: 168 DDLEEIRELYDLLSLGYYTHATPTLFNAGCKMQQLSSCFLLAMQEDSINGIYDTLKDCAL 227
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+ +HNIRATG+ I GTNG SNGIVPML+VFN+TARYVDQGGGKRKG+FAVY
Sbjct: 228 ISKSAGGIGLHIHNIRATGAPIIGTNGVSNGIVPMLKVFNETARYVDQGGGKRKGSFAVY 287
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADI FLDLRKNHGKEE RARDLF ALWVPDLFMERV+++ W+LF P+ GL+
Sbjct: 288 LEPWHADIESFLDLRKNHGKEEFRARDLFLALWVPDLFMERVENDAEWTLFSPHNTKGLS 347
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EF + Y +YE+ G K ++A+ L +I++SQ ETGTPYML+KD CN+KSNQ+NL
Sbjct: 348 DLYGAEFTQKYQEYERMGLGVKTIKARQLMTQIIESQAETGTPYMLYKDACNEKSNQKNL 407
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLC E+++ ++P ETA CNLAS+ALP++V + G F
Sbjct: 408 GTIKSSNLCAEIMEVSTPDETAACNLASMALPKFVTDTG--------------------F 447
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL +VT + +NL+++IDVNY+P + +SN HRP+G+G+QGLAD F + +PFDS
Sbjct: 448 DFDKLHQVTKVAIKNLDRVIDVNYHPTDKIEKSNHAHRPVGLGIQGLADVFFKMHLPFDS 507
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA QLN+DI ET+Y+ +L S EIAA++G Y +Y GSP+S G Q D+W PS RWDW
Sbjct: 508 EEALQLNRDIAETMYHASLEASCEIAAQKGAYSSYDGSPISHGQFQFDLWDEQPSSRWDW 567
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I ++GVRNSLL+A MPTAST+QILGNNE FE TSNIY R+ LSGEF+++NKHL
Sbjct: 568 SQLKRQIVEHGVRNSLLIAQMPTASTAQILGNNEAFEAQTSNIYKRQTLSGEFIIINKHL 627
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
+ DL + GLW+ I++ II ++GSVQ I IP++L+++Y+TVWEI QK ++DM+ R +
Sbjct: 628 VSDLEQRGLWTSKIRDAIILNNGSVQGIDAIPDDLQSVYRTVWEISQKVIIDMSAARAPF 687
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTV 771
+ SQSLN+ + P F ++ ++HF+AW RGLKTGMYYLRS+ + +A+K TV
Sbjct: 688 VCQSQSLNLWLASPTFAQINAMHFYAWKRGLKTGMYYLRSKPSTNAVKVTV 738
>gi|299471069|emb|CBN78928.1| ribonucleotide reductase large chain subunit [Ectocarpus
siliculosus]
Length = 653
Score = 910 bits (2353), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/661 (64%), Positives = 526/661 (79%), Gaps = 18/661 (2%)
Query: 153 RSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPR 212
RSYLLK GKVVERPQHM+MRV+VGIHKDDID I+TY +MSQR FTHA+PTLFNAGTP+
Sbjct: 6 RSYLLKADGKVVERPQHMIMRVSVGIHKDDIDKVIETYDLMSQRLFTHATPTLFNAGTPK 65
Query: 213 AQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGI 272
Q+SSCFL+ MK+DSI GIYDTLK+CA ISK AGGIG+S+H++RA SYIRGTNG+SNGI
Sbjct: 66 PQMSSCFLLTMKEDSINGIYDTLKQCAQISKHAGGIGLSIHHVRAANSYIRGTNGSSNGI 125
Query: 273 VPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYAL 332
VPMLRVFN+TARYVDQGGGKRKG+ AVYLEPWHADI FLDL+KNHG E RARDLFYA+
Sbjct: 126 VPMLRVFNNTARYVDQGGGKRKGSIAVYLEPWHADIVAFLDLKKNHGNELERARDLFYAM 185
Query: 333 WVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYE-KEGKAKKVVQAQNLWF 391
W+PDLFM+RV+++G W+LFCPNEAPGL+D EF+ LY +YE KEG +++ ++A+ LW
Sbjct: 186 WIPDLFMQRVEADGDWNLFCPNEAPGLSDTHSEEFKELYEQYEAKEGLSRRTMKARLLWD 245
Query: 392 EILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIAL 451
IL+SQ+ETGTPYML+KD CN KSNQ+NLGTIKSSNLCTE+++YT+P E AVCNLASI L
Sbjct: 246 AILESQVETGTPYMLYKDACNFKSNQKNLGTIKSSNLCTEIVEYTAPDEVAVCNLASINL 305
Query: 452 PRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETAR 511
V +P + +K +DFEKL ++ +VT NLN++ID NYYP+E AR
Sbjct: 306 SALV----IPPTAETTKAT---------YDFEKLQHISEVVTRNLNRVIDANYYPIEEAR 352
Query: 512 RSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGP 571
SN+RHRPIGIGVQGLAD FI + +PF+S EA +LN+DIFETIY+ A+ S E+A GP
Sbjct: 353 NSNMRHRPIGIGVQGLADAFIKMRLPFESEEACKLNRDIFETIYFGAVNASVELAKELGP 412
Query: 572 YETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILG 631
YETY GSP S+G+LQ D+WGV P+ R DW L+ ++++G+RNSLLVAPMPTAST+QILG
Sbjct: 413 YETYAGSPASEGLLQFDLWGVKPTGRHDWAALKARMAEHGLRNSLLVAPMPTASTAQILG 472
Query: 632 NNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQI 691
NNE EP+TSN+Y+RRVL+GEF VVNK+LL DLTE GLW+P ++N+II D GSVQ + QI
Sbjct: 473 NNESVEPFTSNMYNRRVLAGEFTVVNKYLLRDLTERGLWTPEVRNQIIADQGSVQNVRQI 532
Query: 692 PEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGL 751
P+ELK +YKTVWEIKQK +++ A DRG YI SQS+N+HM + +FGKL+S+HF+AW +GL
Sbjct: 533 PQELKDLYKTVWEIKQKFILNQAADRGAYICQSQSMNVHMAEASFGKLSSMHFYAWKKGL 592
Query: 752 KTGMYYLRSRAAADAIKFTVDTSVLK----ENPKVTDDDDAKMAQMVCSLTNREECMACG 807
KTGMYYLR+R ADAI+FTVD S LK E K A+ + EC++CG
Sbjct: 593 KTGMYYLRTRPKADAIQFTVDQSSLKVSREEAAKSGAKSGAEGGSAGLEVEEEPECLSCG 652
Query: 808 S 808
+
Sbjct: 653 A 653
>gi|165969145|ref|YP_001651045.1| ribonucleotide reductase small subunit 1 [Orgyia leucostigma NPV]
gi|164663641|gb|ABY65861.1| ribonucleotide reductase small subunit 1 [Orgyia leucostigma NPV]
Length = 761
Score = 910 bits (2352), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/772 (54%), Positives = 570/772 (73%), Gaps = 30/772 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
+YV+KRDG ++ V DKIT++L +LSYGL+ + DP ++ +V +Y GVTT++LD+ A
Sbjct: 9 LYVIKRDGSKQTVLLDKITSKLNRLSYGLNKQFIDPAAITIQVVKTIYAGVTTTELDQHA 68
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
A+ A M H DYA LA RI+V + HK+ SF + +Y H L++ +
Sbjct: 69 AKETANMAYIHDDYALLAGRIMVDDNHKHVPDSFVRVVAKLYKH---------NLVSLAL 119
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+++ NA L+++I Y RD++Y YF +KTLE YL ++ G+V ER QHMLMRVA+GIH
Sbjct: 120 FEVASANADALEAQIDYKRDYEYKYFAYKTLENGYLKRINGRVAERIQHMLMRVAIGIHG 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DID+AI+TY++ + + FTHASPTLF AG P+ QLSSCFL+ +K+DSI+G+Y+TL +CA
Sbjct: 180 RDIDAAIETYNLTANKMFTHASPTLFAAGCPQPQLSSCFLLTLKEDSIKGMYETLADCAQ 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK GG+GV+VH RA GS IRGTNGT++G+ P+LRV+N+ R+VDQGG KRKGA AVY
Sbjct: 240 ISKYGGGLGVNVHKARARGSAIRGTNGTASGVEPLLRVYNNCVRHVDQGG-KRKGAMAVY 298
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADI++FL+L++N G E+ +ARDL YALWVPDLFM+RVQ N +WSL CP+ PGL+
Sbjct: 299 LEPWHADIYDFLNLKRNMGAEDKKARDLLYALWVPDLFMKRVQQNEMWSLMCPDRCPGLS 358
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D + EFE+LY +YE E + V+A++L+ I+++Q+ETGTPY+L+KD CN KSNQ+NL
Sbjct: 359 DVYSLEFEKLYEQYESENRFTCQVEARSLFRTIIETQVETGTPYILYKDACNIKSNQKNL 418
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+ SNLC E++QY+S E AVCNLAS+ + R+++ GV F
Sbjct: 419 GTIRCSNLCAEIVQYSSSEEIAVCNLASVCVNRFIKS-GV-------------------F 458
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF L VT IV +NLNKIID+NYYP+E A+ SNL+HRP+G+G+QGLAD F +LG+P++S
Sbjct: 459 DFVALKSVTKIVVKNLNKIIDINYYPLEAAKESNLKHRPVGVGIQGLADAFCILGLPYES 518
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
+A+ LNK I ET+YY AL S ++A GPY +Y SP S G+LQ DMW V P++ W+W
Sbjct: 519 DKAKMLNKQIAETVYYAALEASCDLAKLNGPYSSYSDSPASLGVLQYDMWNVQPTNLWNW 578
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+K+G+RNSLLVA MPTA+T+QILGNNE FEP+TSN+Y RRVL+G+F V+N+HL
Sbjct: 579 ADLKLRIAKHGLRNSLLVAYMPTATTAQILGNNESFEPFTSNLYVRRVLAGDFQVINQHL 638
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
+ DL + L+ ++N II GSVQKI +IP+++KA+YKTVWE+ K L+DMA DRG +
Sbjct: 639 VEDLCRLNLYDDHMRNSIIAAGGSVQKIDRIPDDIKAVYKTVWEMSSKNLIDMAADRGAF 698
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
ID SQS N+ + QP+F LTS+H H W RGLKTGMYYLR++ AADAI FTVD
Sbjct: 699 IDQSQSFNVFIAQPSFALLTSVHMHTWKRGLKTGMYYLRTKPAADAIAFTVD 750
>gi|397604632|gb|EJK58729.1| hypothetical protein THAOC_21121 [Thalassiosira oceanica]
Length = 966
Score = 910 bits (2351), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 452/862 (52%), Positives = 595/862 (69%), Gaps = 71/862 (8%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
++V KRDG + + KI RL KLS GL++E+ ++ + G Y +TT ++D LA
Sbjct: 122 VFVKKRDGSLDPLSEQKILQRLHKLSSGLNLEYLSLPELTSAIMRGTYPNITTLEIDTLA 181
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
+ETAA+ +T HPDYA LAARI ++ HK T FSE + ++ H N R ++ +
Sbjct: 182 SETAASRSTQHPDYAQLAARICATSNHKQTPAKFSEAMIEL--HDNGRG-----FVSGQL 234
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVV-ERPQHMLMRVAVGIH 179
++I + +D +I +RD D YFG+KTLER+YLLK +V+ ERP +M MRVA+GIH
Sbjct: 235 AELIERRGDEIDEQIRPERDLDLSYFGYKTLERAYLLKDDSEVIRERPSYMWMRVALGIH 294
Query: 180 --------KDD----------------IDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQL 215
DD +++A +TYH+MSQ + THASPTLF+AGT QL
Sbjct: 295 MTRPELDETDDSGTATIKWTKEEEDAHLEAAFETYHLMSQGYCTHASPTLFHAGTTHPQL 354
Query: 216 SSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPM 275
SSCFLV M DDSI+GIYDTLK CA+ISK+AGGIG+SV+ IRA G++I+GT G SNG+VPM
Sbjct: 355 SSCFLVQMSDDSIDGIYDTLKRCAVISKAAGGIGLSVNKIRARGTFIKGTRGVSNGLVPM 414
Query: 276 LRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVP 335
LRVF+ T+ YVDQGGGKR GAFA+Y+EPWHADIF+ L+LRKNHGKEE RAR+LFY LWVP
Sbjct: 415 LRVFDSTSHYVDQGGGKRPGAFAIYVEPWHADIFDVLNLRKNHGKEEQRARNLFYGLWVP 474
Query: 336 DLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILK 395
DLFM+RV+ +G+WSL CP+E PGL +C G +FE+LY KYE EG+ K+ ++A+ LW IL
Sbjct: 475 DLFMKRVEEDGVWSLMCPHECPGLGECHGEQFEKLYEKYESEGRHKRQIRARQLWAAILD 534
Query: 396 SQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRY- 454
+QIETG PY+L+KD N KSNQQNLGTI+SSNLCTE+IQYT+ E AVCNLASI L ++
Sbjct: 535 AQIETGNPYLLYKDAANGKSNQQNLGTIQSSNLCTEIIQYTNEEEVAVCNLASINLSKFV 594
Query: 455 VREMGV-PMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRS 513
V + GV S P + YFD +L EV VT NL+K+ID+N YPVE A+ S
Sbjct: 595 VTDRGVYGSASKPG---------DAYFDHGRLHEVAKTVTRNLDKVIDINQYPVEGAKLS 645
Query: 514 NLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYE 573
N RHRP+GIGV GLAD F+ LG+PF S +A++LN+ IFETIY+ AL S+EIAA +G Y
Sbjct: 646 NRRHRPVGIGVSGLADAFLRLGLPFASDDAKELNEAIFETIYHAALEASNEIAAEKGSYS 705
Query: 574 TYHGSPVSKGILQPDMWGV----NPSDR-----------------------WDWGGLRDM 606
++ GSP S G LQ ++WGV PS R +DW GLR
Sbjct: 706 SFEGSPASNGELQFNLWGVKDDDTPSQRGKRSGAAQSMKHQRYPDVVAGNGYDWDGLRQR 765
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
I K G+RNSLLVAPMPTASTSQILG NECFEP+ +N+Y RRV +GEF+VVN HL+ DLT+
Sbjct: 766 IIKTGLRNSLLVAPMPTASTSQILGVNECFEPFATNLYVRRVKAGEFIVVNPHLIQDLTD 825
Query: 667 MGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQS 726
MGLW+ ++N+++ D GSV I IP+ LK +YKTVWE+K + L+DMA DRG +ID SQS
Sbjct: 826 MGLWNKSVRNQLMRDSGSVANIDCIPDRLKELYKTVWEMKMRDLIDMAADRGRFIDQSQS 885
Query: 727 LNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDD 786
LN+ P +LT++HF+AW +GLKTG+YYLR++ A +AI+FTV S+ E+ D+
Sbjct: 886 LNLFTAAPTVSRLTAMHFYAWRKGLKTGIYYLRTKPAVNAIQFTVSKSIDNESSDNNGDE 945
Query: 787 DAKMAQMVCSLTNREECMACGS 808
+ + + L + EC++C +
Sbjct: 946 QVQNSNLP-ELGSESECLSCSA 966
>gi|68490738|ref|XP_710811.1| hypothetical protein CaO19.13267 [Candida albicans SC5314]
gi|68490761|ref|XP_710800.1| hypothetical protein CaO19.5845 [Candida albicans SC5314]
gi|46432045|gb|EAK91552.1| hypothetical protein CaO19.5845 [Candida albicans SC5314]
gi|46432057|gb|EAK91563.1| hypothetical protein CaO19.13267 [Candida albicans SC5314]
Length = 816
Score = 910 bits (2351), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 440/775 (56%), Positives = 559/775 (72%), Gaps = 23/775 (2%)
Query: 8 GKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAM 67
G++E KI L+++S+ L D ++ + V G+ +T +L AE A+
Sbjct: 9 GEEEDFDSVKIHKLLEEVSFNLGDLDLDQIV--ESVQRGLPSSLTIEELYTFIAEVIASR 66
Query: 68 TTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKN 127
HPDYA LA RI L+ SFSE ++ + + +S +P I+ Y ++ K+
Sbjct: 67 VIYHPDYAILAGRIETRKLYLKVPYSFSENVERLRKYRPRKSNSYSP-ISSAFYKVVKKH 125
Query: 128 AARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAI 187
LD I RD++ YFG KTLE SYLLK+ G+V E PQ++ MRVA+GIH++DI++
Sbjct: 126 GEFLDKVIDKTRDYNLTYFGIKTLESSYLLKIDGEVAELPQYLFMRVAIGIHQNDINAIA 185
Query: 188 KTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGG 247
+TY +MSQ++F HASPTL+NAG+ LSSCFLV MKDDSI+GI+ TL E A+ISK++GG
Sbjct: 186 ETYDLMSQKYFIHASPTLYNAGSEFNYLSSCFLVAMKDDSIDGIFKTLNEAALISKASGG 245
Query: 248 IGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHAD 307
IG+ VHNIR+ GSYI TNG SNG+VPMLRV+N+TARYVDQGGGKR GAFA+Y+EPWH D
Sbjct: 246 IGIHVHNIRSNGSYIASTNGNSNGLVPMLRVYNNTARYVDQGGGKRPGAFAIYIEPWHGD 305
Query: 308 IFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEF 367
IF+ L++RKNHG EE R RDLFY LW+PDLFM+RV+ N W+LF PNEA GL+D +G EF
Sbjct: 306 IFDILEMRKNHGNEEMRTRDLFYGLWIPDLFMKRVKENSDWTLFSPNEAVGLSDVYGEEF 365
Query: 368 ERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSN 427
E+LY KYE EG KV A LW IL SQ ETG PYML+KD CN KSNQ+N+GTIKSSN
Sbjct: 366 EKLYCKYESEGFGTKV-SAHKLWLAILHSQTETGGPYMLYKDACNTKSNQKNIGTIKSSN 424
Query: 428 LCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAE 487
LC E+++Y+SP ETAVCNLAS+ALP Y++ +G FDFEKL
Sbjct: 425 LCCEIVEYSSPKETAVCNLASLALPTYLKTT--------EDAIG--------FDFEKLHS 468
Query: 488 VTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLN 547
VT ++T NLN++IDV YPVETA SN RHRPI +GVQGLAD F L +PFDS A+ LN
Sbjct: 469 VTKVLTRNLNRVIDVTKYPVETAEYSNKRHRPIALGVQGLADLFAELRLPFDSAMAKTLN 528
Query: 548 KDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMI 607
IFETIY+ AL S E+A +EGPYET+ GSP SKGILQ DMW PS +DW L+D I
Sbjct: 529 IQIFETIYHAALEASVELAMKEGPYETFQGSPASKGILQFDMWKHKPSPMYDWHALKDNI 588
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEM 667
G+RNSLLVAPMPTASTSQILG NECFEPYTSN+Y+RRVL+GE+ +VNK+L+ DL ++
Sbjct: 589 QNFGLRNSLLVAPMPTASTSQILGFNECFEPYTSNLYNRRVLAGEYQIVNKYLIKDLMDL 648
Query: 668 GLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSL 727
G+W ++NKII ++GS+Q IP IP+E+K +YKTVWE+ QK ++DMA DRG ++D SQS+
Sbjct: 649 GIWDSAMRNKIIMENGSIQNIPNIPDEIKQLYKTVWELSQKVIIDMAADRGKFVDQSQSM 708
Query: 728 NIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKV 782
NIH+ P GKLTS HF+AW +GLKTGMYYLR++AA+ AI+FTVD KE KV
Sbjct: 709 NIHLRNPTIGKLTSCHFYAWEKGLKTGMYYLRTQAASRAIQFTVDA---KEAEKV 760
>gi|320581724|gb|EFW95943.1| ribonucleotide reductase large subunit Rnr1 [Ogataea parapolymorpha
DL-1]
Length = 816
Score = 908 bits (2346), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 444/820 (54%), Positives = 574/820 (70%), Gaps = 33/820 (4%)
Query: 6 RDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAA 65
+ GK+ D + L L+ GL+ E ++ KV +G+ + +T +L +L AE +A
Sbjct: 13 KSGKESVFSRDILRNHLLSLAQGLNTEFVSIDVILDKVVSGLPESLTVQELLDLTAEVSA 72
Query: 66 AMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIM 125
++TT H D++ LAAR++V +L K SFSE + M + + LIA DV++I+
Sbjct: 73 SLTTVHYDHSYLAARVLVRHLQKQVCGSFSENVNRMRQYRPSQYRSFKSLIAADVHEIVN 132
Query: 126 KNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS 185
K+A L+ I +DRD + DYFGF+T+ERSYLLK+ G+ E PQ++ MRVAVGIHK +I+
Sbjct: 133 KHADVLNKAIDFDRDLELDYFGFRTMERSYLLKMDGRPCETPQYLFMRVAVGIHKGNIER 192
Query: 186 AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSA 245
++TY +MSQ++F HASPTLFNAGT LSSCFL+ M DSI GI+ T+ + A+ISK+A
Sbjct: 193 VLETYRLMSQKYFIHASPTLFNAGTETPNLSSCFLLAMDGDSINGIFRTIHKSALISKAA 252
Query: 246 GGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWH 305
GGIG+ V NIRA GSYI GTNGTSNG+VPM++VFN TA+YVDQGG KR GAF +YLEPWH
Sbjct: 253 GGIGIHVSNIRAAGSYISGTNGTSNGLVPMVQVFNSTAKYVDQGGNKRPGAFCMYLEPWH 312
Query: 306 ADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGT 365
AD+FEFLDLRKNHGKEE RARDLFYALW+PDLFME+V+ + W LF +++PGL+D +G
Sbjct: 313 ADVFEFLDLRKNHGKEETRARDLFYALWIPDLFMEKVEKDQEWCLFSEDQSPGLSDSYGD 372
Query: 366 EFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKS 425
EF +LY +YE+EG+ + V+AQ LW IL +Q ETG P++L+KD CNKKSNQQNLGTIKS
Sbjct: 373 EFVKLYNRYEREGRYIRKVRAQKLWHAILVAQTETGNPFLLYKDACNKKSNQQNLGTIKS 432
Query: 426 SNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKL 485
SNLC E+++Y+S ETAVCNL S+ALP +V H +K R FDF+ L
Sbjct: 433 SNLCCEIVEYSSNEETAVCNLGSLALPSFV---------HDNK-------GERKFDFKFL 476
Query: 486 AEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQ 545
+V + NL+ +IDV YP+ A SN RHRPI IGVQGLAD F L MPF S E+++
Sbjct: 477 HDVCKTLARNLDTVIDVGSYPLPEAEVSNKRHRPIAIGVQGLADVFFKLRMPFGSPESRK 536
Query: 546 LNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRD 605
LN IFETIY+ AL TS+E+A GPY++Y GSP+SKG+LQ D W PSD WDW GL+
Sbjct: 537 LNILIFETIYHAALETSAELAEIYGPYDSYAGSPISKGVLQYDFWNAKPSDMWDWEGLKA 596
Query: 606 MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLT 665
I +NGVRNSLLVA MPTASTSQI G ECFEP TSN+YSRRVLSGEF VVN++L+ DL
Sbjct: 597 KIHRNGVRNSLLVALMPTASTSQIFGFTECFEPITSNMYSRRVLSGEFQVVNRYLIDDLV 656
Query: 666 EMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQ 725
++GLW P +KN+I+ +GSVQ I IP + K IYKTVWEI+Q+ L+DMA DR +ID SQ
Sbjct: 657 DLGLWGPEMKNEILRMEGSVQAIESIPADTKEIYKTVWEIQQRALIDMAADRAPFIDQSQ 716
Query: 726 SLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDD 785
S+N+ M P KLTS+HF+AW +GLKTG+YYLR++AAA AIKFTV S K + + D
Sbjct: 717 SMNLFMRNPTMSKLTSMHFYAWKKGLKTGIYYLRTQAAASAIKFTVTPSRFKRSISESRD 776
Query: 786 DDAKMAQ-----------------MVCSLTNREECMACGS 808
+ + C + + E C AC S
Sbjct: 777 TTKRRKSNGNEVTEGYNIYDKDNVLACKVGDPETCDACSS 816
>gi|163801386|ref|ZP_02195285.1| hypothetical protein 1103602000598_AND4_10974 [Vibrio sp. AND4]
gi|159174875|gb|EDP59675.1| hypothetical protein AND4_10974 [Vibrio sp. AND4]
Length = 752
Score = 906 bits (2342), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/772 (54%), Positives = 570/772 (73%), Gaps = 35/772 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V+KRDG++E DK+T R + L+ GL +E P+ V+Q+V +G+Y G+ +++D
Sbjct: 1 MDVIKRDGRKEKASLDKVTRRAEMLADGLKVE---PIAVAQRVVSGLYDGIKATEIDVFL 57
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA++ T HPDYA LAAR++VS+L K T + T S L I D
Sbjct: 58 AETAASLATEHPDYAKLAARVMVSSLQKETNGYAAAT-----------SELSEIGILSDA 106
Query: 121 Y-DIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIH 179
Y + + +N L+ I Y RD+ +DYFG+KTLERSYLLKV+G VVERPQ M MRVAV +
Sbjct: 107 YVNFVARNQLALEDMIDYKRDYQFDYFGYKTLERSYLLKVKGAVVERPQDMFMRVAVVVA 166
Query: 180 KDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECA 239
DD++ + Y ++S ++THA+PTLFNAG QLSSCFL+ M++DSI+GIYDTLK+CA
Sbjct: 167 GDDLEEIRELYDLLSLGYYTHATPTLFNAGCKMQQLSSCFLLAMQEDSIDGIYDTLKDCA 226
Query: 240 IISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAV 299
+ISKSAGGIG+ +HNIRATG+ I GTNG SNGI+PML+VFN+TARYVDQGGGKRKG+FAV
Sbjct: 227 LISKSAGGIGLHIHNIRATGAPIIGTNGVSNGIIPMLKVFNETARYVDQGGGKRKGSFAV 286
Query: 300 YLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGL 359
YLEPWHADI FLDLRKNHGKEE RARDLF ALWVPDLFM+RV+++ W+LF P+ L
Sbjct: 287 YLEPWHADIESFLDLRKNHGKEEFRARDLFLALWVPDLFMQRVENDAEWTLFSPHNTKDL 346
Query: 360 ADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQN 419
++ +G+EF R Y +YE+ G K ++A+ L +I++SQ ETGTPYML+KD CN+KSNQ+N
Sbjct: 347 SELYGSEFNRKYQEYERIGLGVKTIKARQLMTKIIESQTETGTPYMLYKDACNEKSNQKN 406
Query: 420 LGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRY 479
LGTIKSSNLC E+++ ++P ETA CNLAS+ALP++V + G
Sbjct: 407 LGTIKSSNLCAEIMEVSTPDETAACNLASVALPKFVTDTG-------------------- 446
Query: 480 FDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFD 539
FDFEKL +VT + +NL+++IDVNY+P +SN HRP+G+G+QGLAD F + +PFD
Sbjct: 447 FDFEKLHQVTKVAIKNLDRVIDVNYHPTNKIEKSNHAHRPVGLGIQGLADVFFKMHLPFD 506
Query: 540 STEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWD 599
S EA LN+DI ET+Y+ +L S EIA ++G Y +Y GSP+S+G+ Q D+WG PS RWD
Sbjct: 507 SKEALHLNRDIAETMYHASLEASCEIAKQKGTYSSYDGSPISQGLFQFDLWGKQPSSRWD 566
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W L+ I+++GVRNSLL+A MPTAST+QILGNNE FE TSN+Y R+ LSGEF+++NKH
Sbjct: 567 WSQLKLKIAEHGVRNSLLIAQMPTASTAQILGNNEAFEAQTSNLYKRQTLSGEFIILNKH 626
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
L+ DL + GLW+ I++ I+ ++GSVQ I IP++L+++Y+TVWEI QK ++DM+ +R
Sbjct: 627 LVRDLEKNGLWTSKIRDAILLNNGSVQGIDAIPDDLQSVYRTVWEISQKVIIDMSAERAP 686
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTV 771
++ SQSLN+ + P F ++ ++HF+AW RGLKTGMYYLRS+ +A+A+K TV
Sbjct: 687 FVCQSQSLNLWLASPTFAQINAMHFYAWKRGLKTGMYYLRSKPSANAVKVTV 738
>gi|313768128|ref|YP_004061559.1| hypothetical protein BpV1_129c [Bathycoccus sp. RCC1105 virus BpV1]
gi|312599735|gb|ADQ91756.1| hypothetical protein BpV1_129c [Bathycoccus sp. RCC1105 virus BpV1]
Length = 748
Score = 905 bits (2340), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/774 (56%), Positives = 567/774 (73%), Gaps = 36/774 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V KR G+ E V FD +T R+ KL+ GLS E D ++Q+V + +Y G+ T ++D L+
Sbjct: 1 MRVTKRSGRVEDVKFDNVTNRISKLTEGLS-ETVDVTKIAQQVFSSIYDGIKTPEIDTLS 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE M T+ PDY LA RI SN+ K +F H R KA ++ +V
Sbjct: 60 AEICIGMITSDPDYEILATRITASNIQKRAANNF---------HIAMRKLHKAGIVTHEV 110
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
++ ++++ +I +RDF++ YFG KTLE+ YL K+ G+++E PQ++ MRVA+GIH
Sbjct: 111 LEV----SSKVKDDIKPERDFEFGYFGLKTLEKGYLQKIDGEIIETPQYLYMRVAIGIHG 166
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DID ++TY +S+ F HA+PTLFNAGTPR Q+SSCFL+ K+DSI+GIYDT+KECA
Sbjct: 167 HDIDHVLETYEALSKGLFIHATPTLFNAGTPRPQMSSCFLIANKEDSIDGIYDTVKECAR 226
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+ VH++RA S+IRGTNGTS+GI+PMLRV+N TARYV+Q G +RKG+ AVY
Sbjct: 227 ISKWAGGIGLHVHDVRANKSHIRGTNGTSDGIIPMLRVYNSTARYVNQAG-RRKGSIAVY 285
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADI +FL++R N G EE R RDLF A+W+PDLFM+RV+S+G WSLFCP++A GL+
Sbjct: 286 LEPWHADILDFLEIRLNQGDEEARCRDLFSAMWIPDLFMKRVESDGNWSLFCPDQAKGLS 345
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LY KYE EG A KVV A +W I+KSQ ETGTPYML+KD CN+KSN +++
Sbjct: 346 DVYGKEFEDLYEKYESEGIATKVVPASEIWKAIIKSQSETGTPYMLYKDACNEKSNHKHV 405
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE++++T ETAVCNLASIALP+YV + F
Sbjct: 406 GTIKSSNLCTEILEFTDKEETAVCNLASIALPKYV------------------DVEKNEF 447
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+ E+L VT +VT NLNK+ID N+YP E +RSN+RHRPIGIGVQGLAD FI+L M F S
Sbjct: 448 NHEELHRVTKMVTRNLNKVIDKNFYPTENGKRSNMRHRPIGIGVQGLADVFIMLRMTFGS 507
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP--SDRW 598
E+++LN DIFETIY+ +L +S E+A GPYET+ GSP SKGILQ DMW +P S R+
Sbjct: 508 EESRKLNIDIFETIYHASLESSCELAEMYGPYETFKGSPFSKGILQFDMWDRDPKFSGRY 567
Query: 599 DWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNK 658
DW +R ++ K G NSLL+APMPTASTSQILGNNECFEPYT+NIY RR L+GEFVVVNK
Sbjct: 568 DWNAMRKLV-KKGTMNSLLLAPMPTASTSQILGNNECFEPYTTNIYLRRTLAGEFVVVNK 626
Query: 659 HLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRG 718
HL++DL E GLWS +K+ ++ +GSVQ I IP++LK +YKTVWE+ QKT++DMA DRG
Sbjct: 627 HLVNDLKERGLWSKEMKDLMVKANGSVQNIIDIPDDLKELYKTVWEMSQKTIIDMAADRG 686
Query: 719 CYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
YID SQS+N+ ++ P KL+S+H +AW GLKTGMYYLRS+A + I+F+++
Sbjct: 687 VYIDQSQSMNLFVESPTISKLSSMHMYAWKTGLKTGMYYLRSKAKSRPIQFSLE 740
>gi|312599278|gb|ADQ91301.1| hypothetical protein BpV2_134c [Bathycoccus sp. RCC1105 virus BpV2]
Length = 748
Score = 905 bits (2338), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/774 (56%), Positives = 567/774 (73%), Gaps = 36/774 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V KR G+ E V FD +T R+ KL+ GLS E D ++Q+V + +Y G+ T ++D L+
Sbjct: 1 MRVTKRSGRVEDVKFDNVTNRISKLTEGLS-ETVDVTKIAQQVFSSIYDGIKTPEIDTLS 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE M T+ PDY LA RI SN+ K +F H R KA ++ +V
Sbjct: 60 AEICIGMITSDPDYEILATRITASNIQKRAANNF---------HIAMRKLHKAGIVTHEV 110
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
++ ++++ +I +RDF++ YFG KTLE+ YL K+ G+++E PQ+M MRVA+GIH
Sbjct: 111 LEV----SSKVKDDIKPERDFEFGYFGLKTLEKGYLQKIDGEIIETPQYMYMRVAIGIHG 166
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DID ++TY +S+ F HA+PTLFNAGTPR Q+SSCFL+ K+DSI+GIYDT+KECA
Sbjct: 167 HDIDHVLETYEALSKGLFIHATPTLFNAGTPRPQMSSCFLISNKEDSIDGIYDTVKECAR 226
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+ +H++RA S+IRGTNGTS+GI+PMLRV+N TARYV+Q G +RKG+ AVY
Sbjct: 227 ISKWAGGIGLHIHDVRANKSHIRGTNGTSDGIIPMLRVYNTTARYVNQAG-RRKGSIAVY 285
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADI +FL++R N G EE R RDLF A+W+PDLFM+RV+S G WSLFCP+ A GL+
Sbjct: 286 LEPWHADILDFLEIRLNQGDEEARCRDLFSAMWIPDLFMKRVESGGNWSLFCPDVARGLS 345
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LY KYE +G A KVV A +W I+KSQ ETGTPYML+KD CN+KSN +++
Sbjct: 346 DVYGKEFEELYEKYEADGIATKVVPASEVWKAIIKSQSETGTPYMLYKDACNEKSNHKHI 405
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLCTE+++YT ETAVCNLASIALP+YV + + F
Sbjct: 406 GTIKSSNLCTEIVEYTDKDETAVCNLASIALPKYV------------------DVEKKEF 447
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+ E+L VT +VT NLNK+ID N+YP E +RSN+RHRPIGIGVQGLAD FI+L M F S
Sbjct: 448 NHEELHRVTKMVTRNLNKVIDKNFYPTENGKRSNMRHRPIGIGVQGLADVFIMLRMTFGS 507
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP--SDRW 598
E+++LN DIFETIY+ +L +S E+A GPYE++ GSP SKGILQ DMW +P S R+
Sbjct: 508 EESRKLNIDIFETIYHASLESSCELAEMYGPYESFKGSPFSKGILQFDMWDRDPKFSGRY 567
Query: 599 DWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNK 658
DW +R+++ K G NSLL+APMPTASTSQILGNNECFEPYT+NIY RR L+GEFVVVNK
Sbjct: 568 DWNAMRELV-KKGTMNSLLLAPMPTASTSQILGNNECFEPYTTNIYLRRTLAGEFVVVNK 626
Query: 659 HLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRG 718
HL++DL E GLWS +K+ ++ +GSVQ I IP++LK +YKTVWE+ QKT++DMA DRG
Sbjct: 627 HLVNDLKERGLWSKEMKDLMVKANGSVQNIIDIPDDLKELYKTVWEMSQKTIIDMAADRG 686
Query: 719 CYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
YID SQS+N+ ++ P KL+S+H +AW GLKTGMYYLRS+A + I+F+++
Sbjct: 687 VYIDQSQSMNLFVESPTISKLSSMHMYAWKTGLKTGMYYLRSKAKSRPIQFSLE 740
>gi|448103839|ref|XP_004200138.1| Piso0_002711 [Millerozyma farinosa CBS 7064]
gi|359381560|emb|CCE82019.1| Piso0_002711 [Millerozyma farinosa CBS 7064]
Length = 856
Score = 904 bits (2337), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 437/798 (54%), Positives = 576/798 (72%), Gaps = 30/798 (3%)
Query: 3 VVKRDGKQEAV----HFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDE 58
VV R G++E + DK++ L++L++ L ++ + L+ K+ G+ ++T+++
Sbjct: 5 VVVRAGREEIITEDFDRDKLSRFLQRLNFNLDSKYVNIELLVDKIVNGLPDRISTNEIYG 64
Query: 59 LAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIAD 118
LA+ET A+ NHPD+A LA R+V + L K SFS+ ++ + E L +
Sbjct: 65 LASETIASNVINHPDHAILAGRVVAAKLQKEMGPSFSKNVEKIVAMNKEYQSTSKRLFSS 124
Query: 119 DVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGI 178
+ + KN LDS + + RDF+ YFG KTLE+SYLL +Q ++ E PQ + +RVA+GI
Sbjct: 125 EFLSTVQKNRDFLDSLVDHSRDFELAYFGIKTLEKSYLLNIQDQICETPQFLFLRVAIGI 184
Query: 179 HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKEC 238
H+DD+++ TY +MS+R+F HASPTLFN+GT LSSCFL+ M DDSI+GIY TL +
Sbjct: 185 HEDDMEAVATTYDLMSKRYFIHASPTLFNSGTNYNFLSSCFLLAMDDDSIDGIYKTLHKA 244
Query: 239 AIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA 298
A+ISK++GGIG+ VHNIR GS I + GTS+G+VPMLRVFN+TARYVDQGG KR GAFA
Sbjct: 245 AMISKASGGIGIHVHNIRGEGSRIASSEGTSSGLVPMLRVFNNTARYVDQGGNKRPGAFA 304
Query: 299 VYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPG 358
+YLEPWH+DIF L+L+KNHGKEE RARDLFY LW+PDLFM RV+ N WSLF + APG
Sbjct: 305 IYLEPWHSDIFSVLELKKNHGKEELRARDLFYGLWIPDLFMHRVKENLDWSLFSSDTAPG 364
Query: 359 LADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQ 418
L++C+G EF LY KYEKE +A KVV+AQ LW IL+SQIETG PYML+KD+CN+KSNQ+
Sbjct: 365 LSECYGEEFNALYEKYEKENRAIKVVKAQRLWHAILESQIETGGPYMLYKDSCNQKSNQR 424
Query: 419 NLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNR 478
NLGTIKSSNLC E+I+Y+SP ETAVCNL S+ALP ++ + + LV
Sbjct: 425 NLGTIKSSNLCCEIIEYSSPEETAVCNLGSLALPSFI--------NAENDLVT------- 469
Query: 479 YFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPF 538
FDF KL EVT ++ +NL+KIIDV YP+ +A+ SN +HRPI IGVQGLAD F+ L +PF
Sbjct: 470 -FDFIKLHEVTKVLAKNLDKIIDVTRYPIPSAQVSNKKHRPIAIGVQGLADLFLELRLPF 528
Query: 539 DSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRW 598
DS +A+ LN IFETIY+ A+ S E+A GPY++++GSP+S+G Q DMW PS +
Sbjct: 529 DSQKAKILNIQIFETIYHAAVEASCELAEMSGPYDSFNGSPMSQGQFQFDMWNHKPSSLF 588
Query: 599 -DWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
DW L++ + K GVRNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVLSGEF VVN
Sbjct: 589 SDWDELKEKVKKAGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYNRRVLSGEFQVVN 648
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
K+LL DL ++G+W+P +KN+I+ ++GS+Q I IP+ +K +YKTVWEI Q+ +++MA DR
Sbjct: 649 KYLLRDLIDLGIWNPSMKNRILAENGSIQSINSIPQNIKDLYKTVWEISQRVVIEMAADR 708
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
G +ID SQSLNIH+ P GKLTS HF+AW GLKTGMYYLR++AA AI+FTVD
Sbjct: 709 GKFIDQSQSLNIHLSNPTLGKLTSCHFYAWKNGLKTGMYYLRTQAATRAIQFTVD----- 763
Query: 778 ENPKVTDDDDAKMAQMVC 795
+ + + A AQ C
Sbjct: 764 ----MEEANKADFAQEAC 777
>gi|294660114|ref|XP_462554.2| DEHA2G23276p [Debaryomyces hansenii CBS767]
gi|199434472|emb|CAG91065.2| DEHA2G23276p [Debaryomyces hansenii CBS767]
Length = 861
Score = 904 bits (2337), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 434/787 (55%), Positives = 568/787 (72%), Gaps = 27/787 (3%)
Query: 8 GKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAM 67
K + +HF L+ L++ L E+ + KV G+ ++ L EL AE+ A
Sbjct: 20 SKTKLLHF------LENLAFELDTEYISLEEIVNKVIDGLPDLISVKDLLELLAESIATK 73
Query: 68 TTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKN 127
HPD++ LA R+ NL K T +FS + + N+ + ++G +++D+ + +M++
Sbjct: 74 IIYHPDHSILAGRVEAVNLQKMTDYTFSSNVIRLRNYKSNKTGRSYGVVSDEYFKTVMEH 133
Query: 128 AARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAI 187
LDS I RD + YFG KTL+ SYLLK+ V E PQ M +RVA+GIH DDIDS I
Sbjct: 134 KHVLDSIIDSRRDLELTYFGIKTLQNSYLLKLDNVVSETPQFMFLRVAIGIHGDDIDSVI 193
Query: 188 KTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGG 247
+TY +MSQ++F HASPTLFN+GT LSSCFL+ M+DDSI+GIY TL + A+ISK++GG
Sbjct: 194 ETYELMSQKYFIHASPTLFNSGTEYNYLSSCFLLAMEDDSIDGIYKTLHKSALISKASGG 253
Query: 248 IGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHAD 307
IG+ VHNIR +GSYI +NGTS+G+VPMLRVFN+TARYVDQGG KR GAFA+Y+EPWH D
Sbjct: 254 IGLHVHNIRGSGSYIASSNGTSSGLVPMLRVFNNTARYVDQGGNKRPGAFAIYIEPWHCD 313
Query: 308 IFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEF 367
I LDL+KNHGKEE RARDLFY LW+PDLFMERV+ + WSLF P+ PGL+DC+G F
Sbjct: 314 IISILDLKKNHGKEEMRARDLFYGLWIPDLFMERVKQDLDWSLFSPDITPGLSDCYGDAF 373
Query: 368 ERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSN 427
+ LY KYE+ GKA + ++AQ LW IL+ Q ETG PYMLFKD CN KSNQ+NLGTIKSSN
Sbjct: 374 KTLYEKYEESGKAIRTIKAQKLWRAILECQTETGGPYMLFKDACNSKSNQRNLGTIKSSN 433
Query: 428 LCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAE 487
LC E+I+Y+SP ETAVCNL S+ALP ++ + S +DF+KL
Sbjct: 434 LCCEIIEYSSPEETAVCNLGSLALPSFI-----------------KNSNELEYDFDKLHT 476
Query: 488 VTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLN 547
VT ++ +NLNKIID+ YP+E+A+ SN+R+RPI +GVQGLAD F+ L +PFDS +A+ LN
Sbjct: 477 VTKVLAKNLNKIIDITKYPIESAKFSNMRNRPIAVGVQGLADLFLELRLPFDSNQAKVLN 536
Query: 548 KDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRW-DWGGLRDM 606
IFETIY+ A+ S E+A ++GPY+T+ GSP+S+G+ Q D+W PS + DW L+
Sbjct: 537 TQIFETIYHAAVEVSIELAIKDGPYDTFKGSPISEGLFQFDLWNHKPSQLYSDWDELKLK 596
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
GVRNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVLSGEF VVNK+L+ DL +
Sbjct: 597 AKTLGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYNRRVLSGEFQVVNKYLMKDLID 656
Query: 667 MGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQS 726
+G+W+ +KNKII ++GS+Q IP IP+ELK +YKTVWEI QK ++++A DRG +ID SQS
Sbjct: 657 LGIWNSSMKNKIILENGSIQNIPSIPKELKQLYKTVWEISQKVIIELAADRGKFIDQSQS 716
Query: 727 LNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDD 786
+NIH+ P FGKLTS HF+AW +GLKTGMYYLR++AA AI+FTVD L E+ K+
Sbjct: 717 MNIHLQDPTFGKLTSSHFYAWEKGLKTGMYYLRTQAATRAIQFTVD---LAESRKLDVQP 773
Query: 787 DAKMAQM 793
+A M+ +
Sbjct: 774 EADMSTL 780
>gi|149238952|ref|XP_001525352.1| ribonucleoside-diphosphate reductase large chain [Lodderomyces
elongisporus NRRL YB-4239]
gi|146450845|gb|EDK45101.1| ribonucleoside-diphosphate reductase large chain [Lodderomyces
elongisporus NRRL YB-4239]
Length = 862
Score = 904 bits (2336), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 428/754 (56%), Positives = 548/754 (72%), Gaps = 18/754 (2%)
Query: 22 LKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARI 81
L+ LS GL H + +G+ +TT + +ET AA HPDY+ LA R+
Sbjct: 28 LRSLSKGLDATHLRLEEAIDAIMSGLPDTLTTKEFYTYVSETVAARVIYHPDYSILAGRV 87
Query: 82 VVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDF 141
L FSE ++ + Y+ R G I++D Y ++M++ D I DRD+
Sbjct: 88 EAKFLQLQVPYRFSENVERL-KQYSPRKGKSFSPISEDFYKVVMEHKDVFDKMIKSDRDY 146
Query: 142 DYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHA 201
D YFG KTLE SYLL++ G+V E PQ M +RV++GIH + +TY++MSQ++F HA
Sbjct: 147 DLTYFGIKTLENSYLLRIDGEVAETPQQMFLRVSIGIHTHSVSHVEETYNLMSQKYFIHA 206
Query: 202 SPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSY 261
PTL+NAG+ LSSCFL+ MKDDSI+GIY TL E A+ISK++GG+G+ VH+IRA GSY
Sbjct: 207 LPTLYNAGSKFNYLSSCFLMAMKDDSIDGIYKTLHETALISKASGGVGIHVHDIRANGSY 266
Query: 262 IRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKE 321
I TNG SNG+VPMLRVFN+TAR+VDQGGGKR GAFA+YLEPWHAD+F+ LD+RKNHG E
Sbjct: 267 IASTNGLSNGLVPMLRVFNNTARFVDQGGGKRPGAFAIYLEPWHADVFDILDMRKNHGNE 326
Query: 322 EHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAK 381
EHR RDLFY LW+PDLFMERV++NG WSLF P+EAPGL+D +G +F+ LY +YEKE A
Sbjct: 327 EHRTRDLFYGLWIPDLFMERVKTNGQWSLFSPDEAPGLSDVYGDDFKELYERYEKEKLAT 386
Query: 382 KVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTET 441
+ + AQ LW IL+SQ ETG PYML+KD CN+KSNQ+NLGTIKSSNLC E+I+Y+SPTET
Sbjct: 387 RTINAQKLWLAILESQTETGGPYMLYKDACNRKSNQKNLGTIKSSNLCCEIIEYSSPTET 446
Query: 442 AVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIID 501
AVCNLAS+ALP ++ V K FDF KL EVT +VT+NLNK+ID
Sbjct: 447 AVCNLASLALPSFLE-------------VSEDDIK---FDFLKLHEVTKVVTKNLNKVID 490
Query: 502 VNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRT 561
V YPVE+A+ SN +HRPI +GVQGLAD F+ L +PFDS+ A+ LN IFET+Y+ A+
Sbjct: 491 VTMYPVESAKNSNKKHRPIALGVQGLADLFLELRLPFDSSAAKNLNIQIFETVYHAAIEA 550
Query: 562 SSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRW-DWGGLRDMISKNGVRNSLLVAP 620
S E++ EGPY ++ GSP SKG LQ D+W PSD + DW L+ + K G+RNSLLVAP
Sbjct: 551 SMELSIVEGPYASFQGSPASKGKLQFDLWNHKPSDLYDDWDILKSKVMKYGLRNSLLVAP 610
Query: 621 MPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIY 680
MPTASTSQILG NECFEPYTSN+Y+RRVLSGEF VVNK+L+ DL ++GLW+ ++NK++
Sbjct: 611 MPTASTSQILGFNECFEPYTSNLYNRRVLSGEFQVVNKYLIKDLIDLGLWNSAMRNKLMM 670
Query: 681 DDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLT 740
D GSVQ I +P+ELK +Y+TVWE+KQK ++DMA DR +ID QS+NI++ P GKLT
Sbjct: 671 DGGSVQNIDILPKELKTLYRTVWELKQKDIIDMAADRAKFIDQLQSMNIYLQNPTIGKLT 730
Query: 741 SLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTS 774
S HFHAW GLKTGMYYLR++AA AI+FT+D +
Sbjct: 731 SCHFHAWEMGLKTGMYYLRTQAATRAIQFTIDAN 764
>gi|241958750|ref|XP_002422094.1| ribonucleoside-diphosphate reductase, large subunit, putative
[Candida dubliniensis CD36]
gi|223645439|emb|CAX40095.1| ribonucleoside-diphosphate reductase, large subunit, putative
[Candida dubliniensis CD36]
Length = 816
Score = 904 bits (2336), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 433/767 (56%), Positives = 554/767 (72%), Gaps = 20/767 (2%)
Query: 8 GKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAM 67
G++E KI L++ S+ L D ++ S V G+ +T +L AE A+
Sbjct: 9 GEEEEFDSVKIHKLLEEASFNLGDLDLDQLVES--VQRGLPSTLTIEELYTFIAEVIASR 66
Query: 68 TTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKN 127
HP+YA LA RI L+ SFSE ++ + + S +P I+ Y ++ K+
Sbjct: 67 VIYHPNYAILAGRIETRKLYLKVPYSFSENVERLRKYRPRESKSYSP-ISSAFYKVVKKH 125
Query: 128 AARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAI 187
D I RD YFG KTLE SYLLK+ G+V E PQ++ MRVA+GIH++D+++ +
Sbjct: 126 GEFFDKVIDKTRDSSLTYFGIKTLESSYLLKMGGEVAELPQYLFMRVAIGIHQNDLNAIV 185
Query: 188 KTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGG 247
+TY +MSQ++F HASPTL+NAG+ LSSCFLV MK+DSI+GI+ TL E A+ISK++GG
Sbjct: 186 ETYDLMSQKYFIHASPTLYNAGSEFNYLSSCFLVAMKEDSIDGIFKTLNEAALISKASGG 245
Query: 248 IGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHAD 307
IG+ VHNIR+ G+YI GTNG+SNG+VPMLRV+N+TARYVDQGGGKR GAFA+Y+EPWH D
Sbjct: 246 IGIHVHNIRSNGAYIAGTNGSSNGLVPMLRVYNNTARYVDQGGGKRPGAFAIYIEPWHGD 305
Query: 308 IFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEF 367
IF+ L++RKNHG EE R RDLFY LW+PDLFM+RV+ N W+LF PNEA GL+D +G EF
Sbjct: 306 IFDILEMRKNHGNEEMRTRDLFYGLWIPDLFMKRVKDNSDWTLFSPNEALGLSDVYGEEF 365
Query: 368 ERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSN 427
E+LY KYE EG KV A LW IL+SQ ETG PYML+KD CN KSNQ+N+GTIKSSN
Sbjct: 366 EKLYCKYESEGFGTKV-SAHKLWLAILQSQTETGGPYMLYKDACNTKSNQKNIGTIKSSN 424
Query: 428 LCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAE 487
LC E+++Y+SP ETAVCNLAS+ALP Y++ + FDFEKL
Sbjct: 425 LCCEIVEYSSPEETAVCNLASLALPTYLKTTEDAIA----------------FDFEKLHS 468
Query: 488 VTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLN 547
VT ++T NLNK+IDV YPV+TA SN RHRPI +GVQGLAD F L +PFDS A+ LN
Sbjct: 469 VTKVLTRNLNKVIDVTKYPVKTAEYSNKRHRPIALGVQGLADLFAELRLPFDSAMAKTLN 528
Query: 548 KDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMI 607
IFETIY+ AL S E+A +EGPYET+ GSP S GILQ DMW PS +DW L+D I
Sbjct: 529 IQIFETIYHAALEASVELAMKEGPYETFQGSPASNGILQFDMWNHKPSPMYDWNALKDNI 588
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEM 667
G+RNSLLVAPMPTASTSQILG NECFEPYTSN+Y+RRVL+GE+ +VNK+L+ DL ++
Sbjct: 589 QNFGLRNSLLVAPMPTASTSQILGFNECFEPYTSNLYNRRVLAGEYQIVNKYLIKDLMDL 648
Query: 668 GLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSL 727
G+W ++NKII ++GS+QKIP IP+E+K +YKTVWE+ QK ++DMA DRG ++D SQS+
Sbjct: 649 GIWDSAMRNKIIMENGSIQKIPNIPDEIKQLYKTVWELSQKVIIDMAADRGKFVDQSQSM 708
Query: 728 NIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTS 774
NIH+ P GKLTS HF+AW +GLKTGMYYLR++AA+ AI+FTVD S
Sbjct: 709 NIHLRNPTIGKLTSCHFYAWEKGLKTGMYYLRTQAASRAIQFTVDAS 755
>gi|422933669|ref|YP_007003794.1| ribonucleotide reductase subunit 1 [Cyprinid herpesvirus 1]
gi|386686075|gb|AFJ20428.1| ribonucleotide reductase subunit 1 [Cyprinid herpesvirus 1]
Length = 798
Score = 904 bits (2335), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 447/821 (54%), Positives = 575/821 (70%), Gaps = 40/821 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V+KRDG V K+ R++K I+ D L++Q+V G++ G T+++D L
Sbjct: 5 MTVIKRDGSVVPVDIGKVAERVRKCE----IDSVDCELLAQQVQAGIHNGCKTAEIDVLL 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
A TAA+MTT HP+Y LAA++ VSNLH T FS+T + ++ + N ++APLI+D++
Sbjct: 61 AHTAASMTTKHPNYGLLAAKVSVSNLHLQTVPEFSKTCEKLWKNINPDLDVEAPLISDEI 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+ + ++A LD+ +I+ D Y YFGFKTLERSYLLK +ERPQHMLMR A+ IHK
Sbjct: 121 FKLSQEHAEELDAALIHGNDHTYSYFGFKTLERSYLLKGPKGPIERPQHMLMRCALQIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DI S ++TY ++S ++ HASPTLFN+G+ R QLSSCFL+ + DDS+ GI +T++ CA+
Sbjct: 181 HDIPSVLETYRLLSNKFMIHASPTLFNSGSSRPQLSSCFLLNLTDDSMAGIMETVRRCAM 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ N+RA+GSYI GTNG SNG+VP+LR+FN AR VDQ GGKR GAFA+Y
Sbjct: 241 ISKYAGGIGLSMSNLRASGSYIAGTNGQSNGLVPVLRIFNMVARLVDQ-GGKRPGAFAIY 299
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWHADIF+FLDLRKN G +E R RDLF ALWVPDLFM+RV+ +G WSL CP PGL
Sbjct: 300 MEPWHADIFDFLDLRKNSGVDERRTRDLFTALWVPDLFMQRVRDDGDWSLMCPASCPGLD 359
Query: 361 DCWGTEFERLYTKYEK-EGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQN 419
WG EF LY +YE G ++VV+A+ LW +IL SQ+ETG+PYML+KD+ N KSN QN
Sbjct: 360 RVWGHEFNELYEQYEATPGAVRRVVKARYLWSQILVSQLETGSPYMLYKDSANAKSNHQN 419
Query: 420 LGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRY 479
LGTI+ SNLCTE+++YT E AVCNLASIALP +V++ G
Sbjct: 420 LGTIRCSNLCTEIMEYTDSQEVAVCNLASIALPEFVQDGGY------------------V 461
Query: 480 FDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFD 539
F+ E LA VT + T NLNKIID N+YP+E +SNLRHRPIGIGVQGLAD F + MPF
Sbjct: 462 FNHEYLAHVTKVATRNLNKIIDCNFYPLEECSKSNLRHRPIGIGVQGLADVFQRMMMPFT 521
Query: 540 STEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSD--- 596
S EA++LN++IFETIYY AL+ S E+A GPY +Y GSPVSKGILQ DMW V D
Sbjct: 522 SPEAKKLNREIFETIYYAALQASCELAKEHGPYSSYQGSPVSKGILQFDMWNVKDEDLSG 581
Query: 597 RWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVV 656
RWDW LR +I ++GVRNSLLVAPMPTAST+QILGNNE EPYTSN Y RRVLSG+F +V
Sbjct: 582 RWDWAELRRLIGEHGVRNSLLVAPMPTASTAQILGNNESIEPYTSNFYQRRVLSGDFQIV 641
Query: 657 NKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVD 716
N HL+ L GLW+ ++ ++ GSVQ IP PE+LK I+KTVWE+ Q+ ++DMA D
Sbjct: 642 NPHLVKCLETRGLWNEDMRLQLTIHRGSVQNIPGFPEDLKEIFKTVWELSQRDIIDMAAD 701
Query: 717 RGCYIDHSQSLNIHMDQPN-----FGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTV 771
R +ID SQSLN+H+ + KLT++H H W +GLKTGMYYLR++AAAD ++FTV
Sbjct: 702 RAPFIDQSQSLNLHLGHEDDQNIKLKKLTAMHMHGWGKGLKTGMYYLRTKAAADPVQFTV 761
Query: 772 DTSVLKENPKVTDDDDAKMAQMVCSLTNRE----ECMACGS 808
S + P DD K ++ TN E C+ C S
Sbjct: 762 MPSTKRPCP----DDGEKRSRKSPKTTNIECTDDVCVMCSS 798
>gi|448100140|ref|XP_004199282.1| Piso0_002711 [Millerozyma farinosa CBS 7064]
gi|359380704|emb|CCE82945.1| Piso0_002711 [Millerozyma farinosa CBS 7064]
Length = 856
Score = 901 bits (2329), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/798 (54%), Positives = 574/798 (71%), Gaps = 30/798 (3%)
Query: 3 VVKRDGKQEAVHFD----KITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDE 58
VV R ++E + D K+T L++L++ L ++ + L+ K+ G+ ++ S++
Sbjct: 5 VVVRAEREEIITEDFDRVKLTRFLQRLNFDLDSKYVNIELLVDKIVNGLPDRISISEIYG 64
Query: 59 LAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIAD 118
LA+E+ A+ NHPD+A LA R+V + L K SFS+ ++ + E L +
Sbjct: 65 LASESIASNVINHPDHAVLAGRVVAAKLQKEMGPSFSKNVEKIVAMNKENHSTSKRLFSS 124
Query: 119 DVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGI 178
+ ++ KN DS + + RD++ YFG KTLE+SYLL +Q ++ E PQ + +RVA+GI
Sbjct: 125 EFLSMVQKNREFFDSLVDHSRDYELAYFGIKTLEKSYLLNIQDQICETPQFLFLRVAIGI 184
Query: 179 HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKEC 238
H DD+++ TY +MS+R+F HASPTLFN+GT LSSCFL+ M DDSI+GIY TL +
Sbjct: 185 HGDDMEAVATTYDLMSKRYFIHASPTLFNSGTNYNFLSSCFLLAMDDDSIDGIYKTLHKA 244
Query: 239 AIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA 298
A+ISK++GGIG+ VHNIR G+ I + GTS+G+VPMLRVFN+TARYVDQGG KR GAFA
Sbjct: 245 AMISKASGGIGIHVHNIRGEGARIASSEGTSSGLVPMLRVFNNTARYVDQGGNKRPGAFA 304
Query: 299 VYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPG 358
+YLEPWH+DIF L+L+KNHGKEE RARDLFY LW+PDLFM RV+ N WSLF + APG
Sbjct: 305 IYLEPWHSDIFSLLELKKNHGKEELRARDLFYGLWIPDLFMHRVKENLDWSLFSSDTAPG 364
Query: 359 LADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQ 418
L++C+G EF +Y +YEKE KA KVV+AQ LW IL+SQIETG PYML+KD+CNKKSNQ+
Sbjct: 365 LSECYGEEFNAVYERYEKENKAIKVVKAQRLWHAILESQIETGGPYMLYKDSCNKKSNQR 424
Query: 419 NLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNR 478
NLGTIKSSNLC E+I+Y+SP ETAVCNL S+ALP ++ + LV
Sbjct: 425 NLGTIKSSNLCCEIIEYSSPEETAVCNLGSLALPSFI--------DAENDLVA------- 469
Query: 479 YFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPF 538
FDF KL EVT ++ +NL+KIIDV YP+ +A+ SN++HRPI IGVQGLAD F+ L +PF
Sbjct: 470 -FDFVKLHEVTKVLAKNLDKIIDVTRYPIRSAQVSNMKHRPIAIGVQGLADLFLELRLPF 528
Query: 539 DSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRW 598
DS +A+ LN IFETIY+ A+ S E+A GPY++++GSP+S+G Q DMW PS +
Sbjct: 529 DSQKAKMLNIQIFETIYHAAIEASCELAESFGPYDSFNGSPMSQGKFQFDMWSHKPSPLF 588
Query: 599 -DWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
DW L++ + K GVRNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVLSGEF VVN
Sbjct: 589 ADWDELKEKVKKTGVRNSLLVAPMPTASTSQILGFNECFEPYTSNIYNRRVLSGEFQVVN 648
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
K+LL DL ++G+WSP +K++I+ ++GS+Q I IP+ +K +YKTVWEI QK +++MA DR
Sbjct: 649 KYLLRDLIDLGIWSPSMKSRILAENGSIQNIKGIPQNIKDLYKTVWEISQKVVIEMAADR 708
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
G +ID SQSLNIH+ P GKLTS HF+AW GLKTGMYYLR++AA AI+FTVD
Sbjct: 709 GKFIDQSQSLNIHLSNPTLGKLTSCHFYAWKNGLKTGMYYLRTQAATRAIQFTVD----- 763
Query: 778 ENPKVTDDDDAKMAQMVC 795
+ + D A +AQ C
Sbjct: 764 ----MEEADKADIAQETC 777
>gi|343495112|ref|ZP_08733307.1| ribonucleoside-diphosphate reductase, alpha subunit [Vibrio
nigripulchritudo ATCC 27043]
gi|342823809|gb|EGU58401.1| ribonucleoside-diphosphate reductase, alpha subunit [Vibrio
nigripulchritudo ATCC 27043]
Length = 751
Score = 897 bits (2319), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 424/808 (52%), Positives = 577/808 (71%), Gaps = 57/808 (7%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V+KRDG++E DK+T R + L+ GL +E P+ V+QKV +G+Y G+ +++D
Sbjct: 1 MDVIKRDGRREKTSLDKVTRRAEALADGLKVE---PIAVAQKVVSGLYDGIKVTEIDVFL 57
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AET+A++ HPDYA LAAR++VS+L K T+ F + + + ++++D
Sbjct: 58 AETSASLAAEHPDYAKLAARVLVSSLQKETQ-GFQWATEQLS---------EIGILSEDY 107
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+ + + I Y RD+ +DYFG+KTLERSYLLKV G +VERPQ M MRVA+ +
Sbjct: 108 VAQVRRQGPEIAELIDYRRDYQFDYFGYKTLERSYLLKVDGNIVERPQDMYMRVAIAVAG 167
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI + Y M+S ++THA+PTLFNAG QLSSCFL+ M+DDSI GIYDTLK+CA+
Sbjct: 168 EDIAQIKELYDMLSLGYYTHATPTLFNAGCKMQQLSSCFLLAMQDDSISGIYDTLKDCAL 227
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIG+ +HNIRA+G+ I GTNG SNGI+PML+VFN+TARYVDQGGGKRKG+FA+Y
Sbjct: 228 ISKSAGGIGLHIHNIRASGAPIIGTNGISNGIIPMLKVFNETARYVDQGGGKRKGSFAIY 287
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADI FLDLRKNHGKEE RARDLF +LWVPDLFMERV+ +G W+LF + A GL+
Sbjct: 288 LEPWHADIESFLDLRKNHGKEEFRARDLFLSLWVPDLFMERVELDGEWTLFSEHNAKGLS 347
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G +F LY KYE+EG K ++A+NL +I++SQ ETGTPYML+KD+CN KSNQ+NL
Sbjct: 348 DVYGDDFVALYEKYEREGLGIKTIKARNLMTQIIESQAETGTPYMLYKDSCNIKSNQKNL 407
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLC E+++ ++P ETA CNLAS+ALP+ V + F
Sbjct: 408 GTIKSSNLCAEIMEVSTPEETAACNLASLALPKCV--------------------IDGQF 447
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KL E+T I +NL+++IDVNY+P + SN HRP+G+G+QGLAD F L + +DS
Sbjct: 448 DFDKLHEITKIAIKNLDRVIDVNYHPTDKIEVSNHAHRPVGLGIQGLADVFFKLHLAYDS 507
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LN+ I ET+Y+ +L SSE+A G Y +Y GSP S+G Q D+W V PSDRWDW
Sbjct: 508 EEARELNRAIAETMYHASLEASSELARDLGAYSSYDGSPASQGTFQFDLWDVQPSDRWDW 567
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+ +S++G+RNSLL+A MPTAST+QILGN E FE TSNIY R+ LSGEF++VN+HL
Sbjct: 568 NALREQVSQHGLRNSLLIAQMPTASTAQILGNTEAFEAQTSNIYKRQTLSGEFIIVNRHL 627
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
+ L E GLW+P I++ II ++GS+Q+I IPE++K++Y+T+WE+ QK ++DM+ DRG Y
Sbjct: 628 VAALEERGLWTPAIRDSIILNNGSLQEIEAIPEDVKSVYRTIWELSQKVIIDMSADRGPY 687
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
+ SQSLN+ + P F ++ ++HF+AW RGLKTGMYYLR++ +A+A+K TV
Sbjct: 688 VCQSQSLNLWLASPTFAQINAMHFYAWKRGLKTGMYYLRTKPSANAVKVTVG-------- 739
Query: 781 KVTDDDDAKMAQMVCSLTNREECMACGS 808
+++D EEC+ CG+
Sbjct: 740 ---NNED-------------EECVGCGA 751
>gi|424037730|ref|ZP_17776455.1| ribonucleoside-diphosphate reductase, alpha subunit [Vibrio
cholerae HENC-02]
gi|408895211|gb|EKM31675.1| ribonucleoside-diphosphate reductase, alpha subunit [Vibrio
cholerae HENC-02]
Length = 735
Score = 892 bits (2306), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/755 (55%), Positives = 556/755 (73%), Gaps = 35/755 (4%)
Query: 18 ITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASL 77
+T R + L+ GL +E P+ V+Q+V +G+Y G+ +++D AETAA++ T HPDYA L
Sbjct: 1 MTRRAEALADGLKVE---PIAVAQRVVSGLYDGIKVTEIDVFLAETAASLATEHPDYAKL 57
Query: 78 AARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVY-DIIMKNAARLDSEII 136
AAR++VS+L K T ++ +D L I DVY D + KN L+ I
Sbjct: 58 AARVMVSSLQKETS-GYATATRD----------LSEIGILSDVYVDFVAKNQFALEDMID 106
Query: 137 YDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQR 196
Y RD+ +DYFG+KTLERSYLLKV+G VVERPQ M MRVAV + DD++ + Y ++S
Sbjct: 107 YKRDYQFDYFGYKTLERSYLLKVKGVVVERPQDMFMRVAVAVAGDDLEEIRELYDLLSLG 166
Query: 197 WFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIR 256
++THA+PTLFNAG QLSSCFL+ M++DSI GIYDTLK+CA+ISKSAGGIG+ +HNIR
Sbjct: 167 YYTHATPTLFNAGCKMQQLSSCFLLAMQEDSINGIYDTLKDCALISKSAGGIGLHIHNIR 226
Query: 257 ATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRK 316
ATG+ I GTNG SNGIVPML+VFN+TARYVDQGGGKRKG+FAVYLEPWHADI FLDLRK
Sbjct: 227 ATGAPIIGTNGVSNGIVPMLKVFNETARYVDQGGGKRKGSFAVYLEPWHADIESFLDLRK 286
Query: 317 NHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK 376
NHGKEE RARDLF ALWVPDLFMERV+++ W+LF P+ GL+D +G EF + Y +YE
Sbjct: 287 NHGKEEFRARDLFLALWVPDLFMERVENDAEWTLFSPHNTKGLSDLYGAEFTQKYQEYEC 346
Query: 377 EGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYT 436
G K ++A+ L +I++SQ ETGTPYML+KD CN+KSNQ+NLGTIKSSNLC E+++ +
Sbjct: 347 MGLGVKTIKARQLMTQIIESQAETGTPYMLYKDACNEKSNQKNLGTIKSSNLCAEIMEVS 406
Query: 437 SPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENL 496
+P ETA CNLAS+ALP++V + G FDF+KL +VT + +NL
Sbjct: 407 TPDETAACNLASMALPKFVTDTG--------------------FDFDKLHQVTKVAIKNL 446
Query: 497 NKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYY 556
+++IDVNY+P + +SN HRP+G+G+QGLAD F + +PFDS EA QLN+DI ET+Y+
Sbjct: 447 DRVIDVNYHPTDKIEKSNHAHRPVGLGIQGLADVFFKMHLPFDSEEALQLNRDIAETMYH 506
Query: 557 HALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSL 616
+L S EIAA++G Y +Y GSP+S G Q D+WG PS RWDW L+ I+ +GVRNSL
Sbjct: 507 ASLEASCEIAAQKGAYSSYDGSPISHGQFQFDLWGEQPSSRWDWSQLKRQIAAHGVRNSL 566
Query: 617 LVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKN 676
L+A MPTAST+QILGNNE FE TSNIY R+ LSGEF+++NKHL+ DL + GLW+ I++
Sbjct: 567 LIAQMPTASTAQILGNNEAFEAQTSNIYKRQTLSGEFIIINKHLVSDLEQRGLWTSKIRD 626
Query: 677 KIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNF 736
II ++GSVQ I IP++L+++Y+TVWEI QK ++DM+ R ++ SQSLN+ + P F
Sbjct: 627 AIILNNGSVQGIDAIPDDLQSVYRTVWEISQKVIIDMSAARAPFVCQSQSLNLWLASPTF 686
Query: 737 GKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTV 771
++ ++HF+AW RGLKTGMYYLRS+ + +A+K TV
Sbjct: 687 AQINAMHFYAWKRGLKTGMYYLRSKPSTNAVKVTV 721
>gi|358399605|gb|EHK48942.1| hypothetical protein TRIATDRAFT_297700 [Trichoderma atroviride IMI
206040]
Length = 733
Score = 889 bits (2297), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/608 (67%), Positives = 492/608 (80%), Gaps = 18/608 (2%)
Query: 170 MLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIE 229
M+MRVAVG+ D+I+ ++TYH+MS ++FTHASPTLFNAGTP+AQLSSCFLV MKDDSIE
Sbjct: 1 MIMRVAVGVWGDNIERVLETYHLMSSKFFTHASPTLFNAGTPQAQLSSCFLVDMKDDSIE 60
Query: 230 GIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQG 289
GIYDTLK CA+ISK AGGIG++VH IRATGSYI GTNGTSNGI+PMLRVFN+TARYVDQG
Sbjct: 61 GIYDTLKTCAMISKMAGGIGLNVHRIRATGSYIAGTNGTSNGIIPMLRVFNNTARYVDQG 120
Query: 290 GGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWS 349
G KR GAFA+YLEPWHAD+FEFLDLRKNHGKEE RARDLF ALW+PDLFM+RV+ N W+
Sbjct: 121 GNKRPGAFAIYLEPWHADVFEFLDLRKNHGKEEVRARDLFLALWIPDLFMKRVEKNLDWT 180
Query: 350 LFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKD 409
L CPNE PGLADC+G EFE LY KYEKEGK +K ++AQ LW+ IL++Q ETG P+ML+KD
Sbjct: 181 LMCPNECPGLADCYGEEFEALYEKYEKEGKGRKTIRAQKLWYSILEAQTETGNPFMLYKD 240
Query: 410 TCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKL 469
CN+KSNQ+NLGTI+SSNLCTE+++Y++P E AVCNLAS+ALP +V
Sbjct: 241 ACNRKSNQKNLGTIRSSNLCTEIVEYSAPDEVAVCNLASLALPAFV-------------- 286
Query: 470 VGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
+DF+KL +VT +V NLN+IIDVNYYPV+ AR SN RHRPIG+GVQGLAD
Sbjct: 287 ----DYNEGCYDFKKLHDVTKVVVRNLNRIIDVNYYPVQEARNSNSRHRPIGVGVQGLAD 342
Query: 530 TFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDM 589
F+ L +PF+S EA++LNK IFETIY+ AL S EIA EGPYE++ GSP S+GILQ D+
Sbjct: 343 AFLALRLPFESPEARELNKQIFETIYHAALEASMEIAKIEGPYESFKGSPASEGILQFDL 402
Query: 590 WGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL 649
W V P+D W+W L++ I ++G+RNSLLVAPMPTASTSQILGNNECFEPYTSNIY RRVL
Sbjct: 403 WDVKPTDLWEWDSLKEQIKEHGIRNSLLVAPMPTASTSQILGNNECFEPYTSNIYQRRVL 462
Query: 650 SGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKT 709
+GEF VVN LL DL + GLWS +KN+II ++GS+Q IP IP ++KA+YKTVWEI Q+
Sbjct: 463 AGEFQVVNPWLLKDLVDTGLWSDAMKNRIIAENGSIQNIPNIPADIKALYKTVWEISQRH 522
Query: 710 LVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKF 769
+V M+ DRG +ID SQSLNIHM P GK+TS+HF W GLKTGMYYLR++AAA I+F
Sbjct: 523 IVQMSADRGAFIDQSQSLNIHMKDPTMGKITSMHFTGWKLGLKTGMYYLRTQAAAAPIQF 582
Query: 770 TVDTSVLK 777
TVD LK
Sbjct: 583 TVDQEALK 590
>gi|344303891|gb|EGW34140.1| hypothetical protein SPAPADRAFT_49208 [Spathaspora passalidarum
NRRL Y-27907]
Length = 843
Score = 889 bits (2296), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/759 (54%), Positives = 551/759 (72%), Gaps = 13/759 (1%)
Query: 16 DKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYA 75
DK+ L+ L + L +H + V + G+ + +L E AE A+ HPDYA
Sbjct: 24 DKLLELLQNLCFNLDTDHLELEAVVSDIARGLPDRIEIEKLYEFVAEALASRIVYHPDYA 83
Query: 76 SLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKA-PLIADDVYDIIMKNAARLDSE 134
LA RI + +FSE +K + + + R + ++++ D++MK+AA D
Sbjct: 84 ILAGRIEIKKFDSIVPYTFSENVKRLQAYRHPRVKNRPYSMLSEKYCDVVMKHAAFFDEV 143
Query: 135 IIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMS 194
I RD + YFG KTLE SYLL++ ++ E PQ++ +RVA+GIH DD++S ++TY +MS
Sbjct: 144 IDKSRDNELTYFGIKTLENSYLLQMNNQIAETPQYLFLRVAIGIHFDDLESVVETYDLMS 203
Query: 195 QRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHN 254
Q++ HASPTL+N+GT LSSCFL+ +K+DSI+GIY TL + A+ISK++GGIG+ +H+
Sbjct: 204 QKYLIHASPTLYNSGTEFNYLSSCFLLAVKEDSIDGIYKTLHQAALISKASGGIGIHMHD 263
Query: 255 IRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDL 314
+RA GS+I T+G SNG+VPMLRVFN+TARYVDQGGGKR GAFA+Y+EPWHADIF+ LD+
Sbjct: 264 VRANGSFIASTSGISNGLVPMLRVFNNTARYVDQGGGKRPGAFAMYIEPWHADIFDILDM 323
Query: 315 RKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKY 374
RKNHG EE R RDLFY LWVPDLFM+RV+ + WSLF P+EAPGL+D +G EF LY KY
Sbjct: 324 RKNHGNEEQRTRDLFYGLWVPDLFMKRVKEDKEWSLFSPDEAPGLSDVYGDEFVELYEKY 383
Query: 375 EKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQ 434
E+EG A ++A LW IL+SQ ETG PYML+KD CN KSNQ+NLGTIK SNLC E+IQ
Sbjct: 384 EREGLAISTIKAHKLWLAILESQTETGVPYMLYKDACNSKSNQKNLGTIKCSNLCCEIIQ 443
Query: 435 YTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTE 494
Y+SP ETAVCN+ S+ALP Y++ G + FDF KL +V ++ +
Sbjct: 444 YSSPEETAVCNIGSLALPSYLKTAE-----------NRAGEEVLEFDFVKLHKVAKVLVK 492
Query: 495 NLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETI 554
NLNK+IDV YPV +A SN +HRPI IGVQGLAD F+ L +PFDS +A+ LN IFETI
Sbjct: 493 NLNKVIDVTRYPVPSAELSNKKHRPIAIGVQGLADLFLELRLPFDSPQAKHLNMQIFETI 552
Query: 555 YYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRW-DWGGLRDMISKNGVR 613
Y+ A+ S+E+A +EGPYE++ GSP S+G+LQ D+W PS + DW L++ I G+R
Sbjct: 553 YHAAIEQSTELAFQEGPYESFEGSPASQGLLQFDLWNHKPSPLYDDWDTLKENIKNFGLR 612
Query: 614 NSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPI 673
NSLLV PMPTASTSQILG NECFEPYTSNIY+RRVLSGEF VVNK+L+ DL ++G+W+
Sbjct: 613 NSLLVGPMPTASTSQILGFNECFEPYTSNIYTRRVLSGEFQVVNKYLIKDLIDLGIWNSS 672
Query: 674 IKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQ 733
++NKII ++GS+Q I IP+E+K +YKTVWEI Q+ ++DMA DRG ++D SQS+NI++ Q
Sbjct: 673 MRNKIIMENGSIQNIASIPQEIKDLYKTVWEISQRVIIDMAADRGKFVDQSQSMNIYLKQ 732
Query: 734 PNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
P FGKLTS HF+AW +GLKTGMYYLR++AA AI+FTVD
Sbjct: 733 PTFGKLTSCHFYAWEKGLKTGMYYLRTQAATRAIQFTVD 771
>gi|449482513|ref|XP_002189376.2| PREDICTED: ribonucleoside-diphosphate reductase large subunit
[Taeniopygia guttata]
Length = 819
Score = 888 bits (2294), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 445/767 (58%), Positives = 549/767 (71%), Gaps = 86/767 (11%)
Query: 98 IKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLL 157
++D+Y + N +G +P+I+ + DI++ N RL+S IIYDRDF Y+YFGFKTLERSYLL
Sbjct: 83 MEDLYTYINPHNGKHSPMISKETLDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLL 142
Query: 158 KVQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSS 217
K+ KV ERPQHMLMRV+VGIHK DID+AI+TY+++S+RWFTHASPTLFNAGT R QLSS
Sbjct: 143 KINSKVAERPQHMLMRVSVGIHKADIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSS 202
Query: 218 CFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLR 277
CFL+CMKDDSIEGIYDTLK+CA+ISKSAGGIG++V IRATGSYI GTNG SNG+VPMLR
Sbjct: 203 CFLLCMKDDSIEGIYDTLKQCALISKSAGGIGLAVSCIRATGSYIAGTNGNSNGLVPMLR 262
Query: 278 VFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDL 337
V+N+TARYVDQGG KR GAFA+YLEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDL
Sbjct: 263 VYNNTARYVDQGGNKRPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDL 322
Query: 338 FMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQ 397
FM+RV++N WSL CPNE PGL D WG EFE+LY YE++G+ ++VV+AQ LW+ I++SQ
Sbjct: 323 FMKRVETNQDWSLMCPNECPGLDDVWGEEFEKLYESYERQGRVRRVVKAQQLWYAIIESQ 382
Query: 398 IETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVRE 457
ETGTPYML+KD+CN+KSNQQNLGTIK SNLCTE+++YTS E AVCNLASIAL YV
Sbjct: 383 TETGTPYMLYKDSCNRKSNQQNLGTIKCSNLCTEIVEYTSREEVAVCNLASIALNMYV-- 440
Query: 458 MGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPV--ETARRSNL 515
P S +DF+KLAEVT ++ NLNKIID+NYYPV + R +
Sbjct: 441 --TPEHS---------------YDFKKLAEVTKVIVRNLNKIIDINYYPVPEDLNRAQFV 483
Query: 516 RHRP------------------------IGIGVQGL--ADTFILLGMPFDSTEAQQLNKD 549
R P G G+ GL ++ G +AQQL
Sbjct: 484 RGAPHAELSSEETWLPQTPRSPEALPGFWGSGLTGLRVRCSYERQGRVRRVVKAQQL--- 540
Query: 550 IFETIYYHALRTSSEIAAREGPYETYHGSPVSKG-------------------------I 584
+Y + + +E PY Y S K I
Sbjct: 541 -----WYAIIESQTETGT---PYMLYKDSCNRKSNQQNLGTIKCSNLCTEIVEYTSREEI 592
Query: 585 LQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY 644
LQ DMW V PSD WDW L++ I+K GVRNSLL++PMPTAST+QILGNNE EPYTSNIY
Sbjct: 593 LQYDMWNVTPSDLWDWKALKEKIAKYGVRNSLLISPMPTASTAQILGNNESIEPYTSNIY 652
Query: 645 SRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWE 704
+RRVLSGEF VVN HLL DLTE GLW+ +KN+II +GS+Q IP+IP++LK +YKTVWE
Sbjct: 653 TRRVLSGEFQVVNPHLLKDLTERGLWNEEMKNQIIAHNGSIQNIPEIPDDLKQLYKTVWE 712
Query: 705 IKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAA 764
I QKT++ MA DRG +ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR++ AA
Sbjct: 713 ISQKTILKMAADRGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTKPAA 772
Query: 765 DAIKFTVDTSVLKENPKVTDDDDAKM---AQMVCSLTNREECMACGS 808
+ I+FT++ L+E K + +++ K A MVCSL NREEC+ CGS
Sbjct: 773 NPIQFTLNKEKLREREKASREEEEKERNKAAMVCSLENREECLMCGS 819
Score = 43.9 bits (102), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 28/38 (73%)
Query: 8 GKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCT 45
G+QE V FDKIT+R++KL YGL+ + DPV V + + T
Sbjct: 51 GRQERVMFDKITSRIQKLCYGLNADFVDPVNVMEDLYT 88
>gi|354546080|emb|CCE42809.1| hypothetical protein CPAR2_204520 [Candida parapsilosis]
Length = 832
Score = 885 bits (2288), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/749 (55%), Positives = 540/749 (72%), Gaps = 17/749 (2%)
Query: 24 KLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVV 83
+ +GL + + + G+ +T ++ A+E A+ +HPDYA LA R+V
Sbjct: 34 RFCHGLDTSYIKLDDIVTSILAGLPDKITIHEIYNFASEVIASRVIHHPDYAILAGRMVS 93
Query: 84 SNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDY 143
L FSE I+ + + N R G ++D+ Y+I+MK+ D I +
Sbjct: 94 HLLQLQVPYRFSENIQRLKDTTNSR-GEPYSQMSDNFYEIVMKHREEFDGIIKKTEKIEL 152
Query: 144 DYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASP 203
YFG KTLE SYL + K+ E P++M +RVA+ IH+DDI + +TY +MSQ++F HASP
Sbjct: 153 AYFGIKTLENSYLWRTGNKIAETPEYMFLRVAIEIHQDDIQAVEETYVLMSQKYFIHASP 212
Query: 204 TLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIR 263
TL+NAG LSSCFL+ MKDDSI+GIY TL E A+ISK++GGIG+ +HNIRA GS+I
Sbjct: 213 TLYNAGCAYNYLSSCFLLAMKDDSIDGIYQTLHEAALISKASGGIGIHIHNIRAQGSHIA 272
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEH 323
TNG + G+VPMLRVFN+TARYVDQGGGKR GAFA+YLEPWHAD+FE L++RKNHG EE
Sbjct: 273 STNGRAGGVVPMLRVFNNTARYVDQGGGKRPGAFAIYLEPWHADVFEILNMRKNHGNEEF 332
Query: 324 RARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKV 383
R RDLFY LW+PDLFM+RV+S G WSLF P+ APGL+D +G+EF LY KYE +G A
Sbjct: 333 RTRDLFYGLWIPDLFMQRVKSGGDWSLFSPDVAPGLSDVYGSEFIELYEKYEAQGLASAT 392
Query: 384 VQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAV 443
++AQ LW IL+SQ ETG PYML+KD CN+K+NQ NLGTIKSSNLC E+++Y+SP+ETAV
Sbjct: 393 IKAQKLWLAILESQTETGGPYMLYKDACNQKTNQSNLGTIKSSNLCCEIVEYSSPSETAV 452
Query: 444 CNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVN 503
CNLAS+ LP +++ +E FDF+KL VT +VT NLNK+IDV
Sbjct: 453 CNLASLGLPSFLQSTEDSIE----------------FDFDKLHSVTKVVTRNLNKVIDVT 496
Query: 504 YYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSS 563
YPV +A RSN ++RPI IGVQGLAD F+ L +PFDS EA++LN IFETIY+ A+ S
Sbjct: 497 RYPVNSAERSNKKNRPIAIGVQGLADLFLELRLPFDSLEAKKLNSQIFETIYHAAVEASL 556
Query: 564 EIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPT 623
E++ EGPY T+ GSP S+ ILQ DMW P DW L+D + +G+RNSLLVAPMPT
Sbjct: 557 ELSILEGPYSTFAGSPASQDILQFDMWNQKPEFYDDWDQLKDNVRSHGLRNSLLVAPMPT 616
Query: 624 ASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDG 683
ASTSQILG NECFEPYTSN+Y+RRV+SGEF VVNK+L+ DL ++G+W+ +++KII D G
Sbjct: 617 ASTSQILGFNECFEPYTSNLYTRRVISGEFQVVNKYLIRDLVDLGIWNSALRSKIIQDGG 676
Query: 684 SVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLH 743
S+Q IP IP +++ +Y+TVWE+KQK ++DMA DRG +ID SQS+NI+M P GKLTS H
Sbjct: 677 SIQNIPVIPGDIRKLYRTVWELKQKDIIDMAADRGKFIDQSQSMNIYMSNPTIGKLTSCH 736
Query: 744 FHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
FHAW +GLKTGMYYLR++AAA AI+FTVD
Sbjct: 737 FHAWEKGLKTGMYYLRTQAAARAIQFTVD 765
>gi|255721743|ref|XP_002545806.1| ribonucleoside-diphosphate reductase large chain [Candida
tropicalis MYA-3404]
gi|240136295|gb|EER35848.1| ribonucleoside-diphosphate reductase large chain [Candida
tropicalis MYA-3404]
Length = 818
Score = 885 bits (2287), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 421/758 (55%), Positives = 555/758 (73%), Gaps = 19/758 (2%)
Query: 17 KITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYAS 76
K+ L++LS+ L D VL S V G+ VT QL AE A+ +PDYA
Sbjct: 19 KVLKLLQELSFNLENLQLDDVLES--VQKGLPATVTVYQLYTFIAEVIASRIIYNPDYAI 76
Query: 77 LAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEII 136
LA R+ + L+ +FS+ ++ + N+ + + +P I+ Y+++ K+ D I
Sbjct: 77 LAGRVELRKLYLKVPYNFSDNVERLRNYKSHGAKSYSP-ISSKFYEVVKKHKEFFDGLID 135
Query: 137 YDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQR 196
RD ++ YFG KTLE SYLLK+ + E PQ + +RVA+GIH +D+ S +TY +MS++
Sbjct: 136 KSRDDEFTYFGIKTLENSYLLKIDSEPAELPQFLFLRVAIGIHLEDLGSVAETYDLMSKK 195
Query: 197 WFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIR 256
+F HASPTL+NAG LSSCFL+ MKDDSI+GIY TL E A+ISK++GGIG+ VH +R
Sbjct: 196 YFIHASPTLYNAGGEFNYLSSCFLIAMKDDSIDGIYKTLHESALISKASGGIGIHVHEVR 255
Query: 257 ATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRK 316
+ GSYI GTNG +NG+VPMLRVFN+TARYVDQGGGKR GAFA+Y+EPWH DIF+ L++RK
Sbjct: 256 SNGSYIAGTNGIANGLVPMLRVFNNTARYVDQGGGKRPGAFAIYIEPWHGDIFDILEMRK 315
Query: 317 NHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK 376
NHG EE R RDLFY LW+PDLFM+RV+++ W+L P+EAPGL+D +G +F+ LY KYEK
Sbjct: 316 NHGSEELRTRDLFYGLWIPDLFMQRVKADEYWTLMSPSEAPGLSDVYGDDFKELYEKYEK 375
Query: 377 EGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYT 436
+G K+ +A LW IL+SQ ETG PYML+KD CN+KSNQ+NLGTIKSSNLC E+++Y+
Sbjct: 376 QGLGTKI-RAHKLWLAILESQTETGGPYMLYKDACNEKSNQKNLGTIKSSNLCCEIVEYS 434
Query: 437 SPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENL 496
SP ETAVCNL S+ALP Y++ + + FDFEKL VT ++ +NL
Sbjct: 435 SPEETAVCNLGSLALPTYLK---------------TSDDEVIEFDFEKLHSVTKVLAKNL 479
Query: 497 NKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYY 556
NK+IDV YPVETA SN R+RPI +GVQGLAD F L +PF+S A++LN IFETIY+
Sbjct: 480 NKVIDVTLYPVETAEYSNKRNRPIALGVQGLADLFAELRLPFESEAARKLNIQIFETIYH 539
Query: 557 HALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSL 616
AL S E++ ++GPYET+ GSP S+GILQ DMW PS +DW L++ I K G+RNSL
Sbjct: 540 AALEASVELSIQDGPYETFQGSPASEGILQFDMWNHTPSKMYDWNKLKESIQKFGLRNSL 599
Query: 617 LVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKN 676
LVAPMPTASTSQILG NECFEPYTSN+Y+RRVLSGEF VVNK+L+ DL ++G+W+ ++N
Sbjct: 600 LVAPMPTASTSQILGFNECFEPYTSNLYNRRVLSGEFQVVNKYLIKDLMDLGIWNSAMRN 659
Query: 677 KIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNF 736
KI+ ++GS+Q I IP+++K +YKTVWEI QK ++DMA DRG +ID SQS+NIH+ +P F
Sbjct: 660 KIMMENGSIQNIQSIPKDIKELYKTVWEISQKVIIDMAADRGKFIDQSQSMNIHLREPTF 719
Query: 737 GKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTS 774
GKLTS HF+AW +GLKTGMYYLR++AA+ AI+FTVD +
Sbjct: 720 GKLTSCHFYAWKQGLKTGMYYLRTQAASRAIQFTVDAT 757
>gi|190347674|gb|EDK39996.2| hypothetical protein PGUG_04094 [Meyerozyma guilliermondii ATCC
6260]
Length = 814
Score = 884 bits (2285), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 429/764 (56%), Positives = 556/764 (72%), Gaps = 32/764 (4%)
Query: 9 KQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMT 68
KQ ++ + L LSY L IEH D V V G+ +T L L AE+ A+ T
Sbjct: 23 KQTKFDPKRLRSLLDTLSYELDIEHLDLDDVVDSVAAGLPATITVDDLLLLTAESLASRT 82
Query: 69 TNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNA 128
T++PDY LA R+ ++ + K+ + SFS I + + + ++ + + KNA
Sbjct: 83 TSYPDYGVLAGRVEMTKIQKSAENSFSANIAKI-------AKIAPNTLSSQLVSVAEKNA 135
Query: 129 ARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAIK 188
++D I + RD++ YF KTL++SYLL E PQ+M MRV++GIH D++SAI+
Sbjct: 136 EKIDGAIDHRRDYELSYFAVKTLQKSYLLVGS----ETPQYMFMRVSLGIHGQDVNSAIE 191
Query: 189 TYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGI 248
TY MSQ++F HASPTLFN+GT LSSCFL+ MK+DSI+GIY TL E A+ISK++GGI
Sbjct: 192 TYTYMSQKYFIHASPTLFNSGTNYNHLSSCFLLAMKEDSIDGIYKTLHETALISKASGGI 251
Query: 249 GVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADI 308
G+ VHNIRA+GS I ++GTS+G+VPMLRVFN+TARYVDQGG KR GAFA+YLEPWHADI
Sbjct: 252 GLHVHNIRASGSRIASSSGTSSGLVPMLRVFNNTARYVDQGGNKRPGAFAIYLEPWHADI 311
Query: 309 FEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFE 368
FE LDL+KNHGKEE RARDLFYALW+PDLFMERV+++ WS F P++APGL +C+G EF+
Sbjct: 312 FEVLDLKKNHGKEEMRARDLFYALWIPDLFMERVRNDEQWSCFSPDQAPGLENCYGEEFK 371
Query: 369 RLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNL 428
RLY YE +G A KVV+AQ LW IL SQIETG PYML+KD CN+KSNQ+NLGTIKSSNL
Sbjct: 372 RLYESYEAKGLAMKVVRAQKLWDAILDSQIETGGPYMLYKDACNEKSNQKNLGTIKSSNL 431
Query: 429 CTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEV 488
C EV+QY+SP E AVCNL S+ALP +V KN FD + L +V
Sbjct: 432 CCEVVQYSSPDEVAVCNLGSVALPMFV--------------------KNDNFDSQLLHKV 471
Query: 489 TGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNK 548
T ++ NLNK+IDV YP+E+AR SN +HRPI +GVQGLAD F+ L +PFDS A++LN
Sbjct: 472 TKVLVNNLNKVIDVTAYPLESARISNKKHRPIAVGVQGLADLFLKLELPFDSPRARELNI 531
Query: 549 DIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRW-DWGGLRDMI 607
+FETIY+ A+ S E+A ++GPYET+ GSP SKG+LQ D+W PSD + DW L+ +
Sbjct: 532 QVFETIYHAAVEASVELAIKDGPYETFAGSPASKGLLQFDLWNHKPSDLYTDWDELKQKV 591
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEM 667
K+G+RNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VVNK+L+ LTE+
Sbjct: 592 VKSGMRNSLLVAPMPTASTSQILGFNECFEPYTSNIYTRRVLAGEFQVVNKYLVKKLTEL 651
Query: 668 GLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSL 727
LW+ +K++I+ GSV I +IP+ ++ ++KTVW+I Q+T++DMAVDR +ID SQSL
Sbjct: 652 NLWNKQMKDRILVAGGSVMNIDEIPQHVRDVFKTVWDISQRTIIDMAVDRAKFIDQSQSL 711
Query: 728 NIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTV 771
NIHM P KLTS HF+AW +GLKTG+YYLR+++A+ AI+FTV
Sbjct: 712 NIHMRNPTKSKLTSCHFYAWKQGLKTGLYYLRTQSASRAIQFTV 755
>gi|344229874|gb|EGV61759.1| ribonucleoside-diphosphate reductase large chain [Candida tenuis
ATCC 10573]
Length = 816
Score = 880 bits (2273), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 422/763 (55%), Positives = 555/763 (72%), Gaps = 21/763 (2%)
Query: 22 LKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARI 81
LK L GL +E D + K+ + T ++L E AE+ AA TT+HPDY+ LA R+
Sbjct: 2 LKWLQRGLRLELSDLDEILDKIALSMADKTTVNELLEYTAESLAARTTSHPDYSLLAGRV 61
Query: 82 VVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDF 141
L K SFS+++ +Y +Y+ ++ P ++ VYD+ MKN LD+ + +RD
Sbjct: 62 EAVKLQKMVSNSFSDSMSKLYYNYHPKTNKHTPSVSKQVYDVAMKNRDVLDTAVESERDL 121
Query: 142 DYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHA 201
YFG KTLERSYL+KV E PQ++ MRVA+GIH D++ AI+TY++MS+++ HA
Sbjct: 122 TISYFGIKTLERSYLIKVNEIPTETPQYLFMRVALGIHGGDVEDAIETYNLMSKKYIMHA 181
Query: 202 SPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSY 261
SPTLF+AGT LSSCFL+ M+DDSI+GIY TL + A+ISK++GGIG+ +HN+RA GS
Sbjct: 182 SPTLFSAGTDYNFLSSCFLLAMEDDSIDGIYKTLHKAALISKASGGIGLHIHNVRARGSL 241
Query: 262 IRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKE 321
+ + G S+G+VPMLRVFNDTARYVDQGG KR GAFAV+LEPWH D+FE LDLRKN+GKE
Sbjct: 242 VSTSGGKSSGLVPMLRVFNDTARYVDQGGNKRPGAFAVFLEPWHTDVFEVLDLRKNYGKE 301
Query: 322 EHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAK 381
E RARDLFY LW+PDLFM++V+ + W LF P+ +PGL+DC+G EF+ LY KYE+ G A
Sbjct: 302 ELRARDLFYGLWIPDLFMQKVKDDEDWCLFSPDVSPGLSDCYGDEFKALYEKYERAGDAV 361
Query: 382 KVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTET 441
+VV+AQ LW IL+SQ ETG PYM++KD CN KSNQ+NLGTIKSSNLC E+++Y+S ET
Sbjct: 362 RVVKAQKLWQSILESQTETGGPYMMYKDACNTKSNQKNLGTIKSSNLCCEIVEYSSKEET 421
Query: 442 AVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIID 501
AVCNL S+ALP +V E + F+F KL EVT ++ +NL+KI+D
Sbjct: 422 AVCNLGSLALPSFVNE----------------DKDSISFNFMKLHEVTKVLGKNLDKIVD 465
Query: 502 VNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRT 561
+ YP E A SN +HRPI IGVQGLAD F LL +PF+S EA++LN IFETIY+ A+
Sbjct: 466 ITRYPDEGAETSNRKHRPIAIGVQGLADVFALLRIPFESKEAKKLNIQIFETIYHAAVEG 525
Query: 562 SSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRW-DWGGLRDMISKNGVRNSLLVAP 620
S E+A + G YET+ GSP S+G+LQ D W PSD + DW L++ + G+RNSLLV P
Sbjct: 526 SIELAKKHGAYETFKGSPASQGMLQFDFWNHKPSDLFDDWNDLKENMMVYGLRNSLLVGP 585
Query: 621 MPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIY 680
MPTASTSQILG NECFEP+TSNIYSRRV SGEF VVNK+L++DL E+GLW+ +K+KI+
Sbjct: 586 MPTASTSQILGFNECFEPFTSNIYSRRVTSGEFQVVNKYLINDLIELGLWNQDLKDKILL 645
Query: 681 DDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLT 740
+GSVQ IP+IP E+K +YKTVWEI QK +++MA DRG ++D SQS+NI+M P + KLT
Sbjct: 646 AEGSVQGIPEIPVEIKELYKTVWEISQKVILEMAADRGRFVDQSQSMNIYMKNPTYSKLT 705
Query: 741 SLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVT 783
S HF++W GLKTGMYYLR++AA+ AI+FT++ + N KV+
Sbjct: 706 SCHFYSWKLGLKTGMYYLRTQAASRAIQFTIE----RTNDKVS 744
>gi|269105082|ref|ZP_06157777.1| ribonucleoside-diphosphate reductase alpha subunit [Photobacterium
damselae subsp. damselae CIP 102761]
gi|268160717|gb|EEZ39215.1| ribonucleoside-diphosphate reductase alpha subunit [Photobacterium
damselae subsp. damselae CIP 102761]
Length = 729
Score = 877 bits (2267), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 410/747 (54%), Positives = 548/747 (73%), Gaps = 33/747 (4%)
Query: 25 LSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVS 84
L+ GL +E P+ V+Q+V +G+Y G+ +++D AETAA++ T HPDYA LAAR++VS
Sbjct: 2 LADGLKVE---PIAVAQRVVSGLYDGIKVTEIDVFLAETAASLATEHPDYAKLAARVMVS 58
Query: 85 NLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYD 144
+L K T + T R + +++ D + KN L+ I Y RD+ +D
Sbjct: 59 SLQKETSGYATAT----------RELSEIGILSSAYVDFVAKNQFALEDMIDYKRDYQFD 108
Query: 145 YFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPT 204
YFG+KTLERSYLLKV+G VVERPQ M MRVAV + DD++ + Y ++S ++THA+PT
Sbjct: 109 YFGYKTLERSYLLKVKGVVVERPQDMFMRVAVAVAGDDLEEIRELYDLLSLCYYTHATPT 168
Query: 205 LFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRG 264
LFNAG QLSSCFL+ M++DSI GIYDTLK+CA+ISKSAGGIG+ +HNIRATG+ I G
Sbjct: 169 LFNAGCKMQQLSSCFLLAMQEDSINGIYDTLKDCALISKSAGGIGLHIHNIRATGAPIIG 228
Query: 265 TNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHR 324
TNG SNGIVPML+VFN+TARYVDQGGGKRKG+FAVYLEPWHADI FLDLRKNHGKEE R
Sbjct: 229 TNGVSNGIVPMLKVFNETARYVDQGGGKRKGSFAVYLEPWHADIESFLDLRKNHGKEEFR 288
Query: 325 ARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVV 384
ARDLF ALWVPDLFMERV+++ W+LF P+ GL+D +G EF + Y +YE+ G K +
Sbjct: 289 ARDLFLALWVPDLFMERVETDAEWTLFSPHNTKGLSDLYGAEFTQKYQEYERMGLGVKTI 348
Query: 385 QAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVC 444
+A+ L +I++SQ ETGTPYML+KD CN+KSNQ+NLGTIKSSNLC E+++ ++P ETA C
Sbjct: 349 KARQLMTQIIESQAETGTPYMLYKDACNEKSNQKNLGTIKSSNLCAEIMEVSTPDETAAC 408
Query: 445 NLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNY 504
NLAS+ALP++V G FDF+KL +VT + +NL+++IDVNY
Sbjct: 409 NLASLALPKFVTNTG--------------------FDFDKLHQVTKVAIKNLDRVIDVNY 448
Query: 505 YPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSE 564
+P + +SN HRP+G+G+QGLAD F + +PFDS EA LN+DI ET+Y+ +L S E
Sbjct: 449 HPTDKIEKSNHAHRPVGLGIQGLADVFFKMHLPFDSEEALLLNRDIAETMYHASLEASCE 508
Query: 565 IAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTA 624
IA ++G Y +Y GSP+S G Q D+W PS RWDW L+ I+++GVRNSLL+A MPTA
Sbjct: 509 IAKQKGTYSSYDGSPISHGQFQFDLWCEQPSSRWDWSQLKHQIAEHGVRNSLLIAQMPTA 568
Query: 625 STSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGS 684
ST+QILGNNE FE TSNIY R+ LSGEF+++NK+L+ DL + GLW+ I++ II ++GS
Sbjct: 569 STAQILGNNEAFEAQTSNIYKRQTLSGEFIIINKYLVSDLEQRGLWTSKIRDAIILNNGS 628
Query: 685 VQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHF 744
VQ I IP++L+++Y+TVWEI QK ++DM+ R ++ SQSLN+ + P F ++ ++HF
Sbjct: 629 VQGIDAIPDDLQSVYRTVWEISQKVIIDMSAARAPFVCQSQSLNLWLASPTFAQINAMHF 688
Query: 745 HAWLRGLKTGMYYLRSRAAADAIKFTV 771
+AW RGLKTGMYYLRS+ + +A+K TV
Sbjct: 689 YAWKRGLKTGMYYLRSKPSTNAVKVTV 715
>gi|422933896|ref|YP_007003955.1| ribonucleotide reductase subunit 1 [Cyprinid herpesvirus 2]
gi|386686209|gb|AFJ20561.1| ribonucleotide reductase subunit 1 [Cyprinid herpesvirus 2]
Length = 824
Score = 877 bits (2267), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 430/782 (54%), Positives = 560/782 (71%), Gaps = 24/782 (3%)
Query: 2 YVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAA 61
YVVKR G+ +A+ K+ R++ Y I +P+ V++KV G+ G TS +D L A
Sbjct: 14 YVVKRSGQTQAIDIQKVADRIENCGYSSKI--VNPLQVAKKVEAGIGNGFKTSAIDVLLA 71
Query: 62 ETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVY 121
+T A+MTT HPDY LA+RI VSNLHK T +FS+ + +Y++ N + APL+++ +
Sbjct: 72 QTLASMTTVHPDYGILASRIAVSNLHKQTPDTFSDAMWQLYHNVNPDTKENAPLVSERFF 131
Query: 122 DIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKD 181
++ +K+ + LD+ +++ RDFD +YFGFKTLE+SYLL VERPQ+M MR A+ IH D
Sbjct: 132 ELSVKHKSELDAAVVHGRDFDLNYFGFKTLEKSYLLSSSKGPVERPQYMYMRCAMQIHGD 191
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAII 241
+I ++TY +MS+ +FTHASPTLFNA + ++Q+SSCFL+ +K+DS+EGI DTLK CA+I
Sbjct: 192 NIARVVETYDLMSRGYFTHASPTLFNACSTKSQMSSCFLLNVKEDSMEGIMDTLKSCAMI 251
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SK AGGIG+S N+RA G+YI+GTNG SNG+VP LR+FN R VDQGG KR GA AVYL
Sbjct: 252 SKHAGGIGMSASNLRAGGAYIKGTNGRSNGLVPTLRIFNALERMVDQGGNKRPGALAVYL 311
Query: 302 EPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLAD 361
EPWHADIFEFLDLRKN+G EE R RDLF ALW+PDLFM+RV+ N WSL CP PGL +
Sbjct: 312 EPWHADIFEFLDLRKNNGVEEQRTRDLFQALWIPDLFMQRVKDNKHWSLMCPARCPGLDE 371
Query: 362 CWGTEFERLYTKYEK-EGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+G +F+ LYT YEK EG K+ V A+ LW +IL +Q+ETG P+ML+KD N+KSN +L
Sbjct: 372 AYGEKFDMLYTGYEKTEGAVKRTVSARELWDKILVAQLETGGPFMLYKDAANRKSNHNHL 431
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+IQYT+ E AVCNLAS+AL +V + +LV F
Sbjct: 432 GTIKCSNLCTEIIQYTNKDEVAVCNLASVALNAFVEPL-----HDGGELV---------F 477
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
+ +KL EV ++T NLN +IDVN+YPV A SN RHRPIGIGVQGLAD F +L MPF S
Sbjct: 478 NHQKLTEVVKVITLNLNNLIDVNFYPVPEAAASNRRHRPIGIGVQGLADVFQMLRMPFTS 537
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSD---R 597
EA++LNK IFETIY+ AL S A GPYE+Y GSPVSKG+LQ DMWG++ D
Sbjct: 538 PEAKRLNKMIFETIYHAALTQSCAQAELYGPYESYDGSPVSKGLLQFDMWGLSERDLGGH 597
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
DW LR I++ G+RNSLLVAPMPTAST+QILGNNE EP+TSN+Y RRVLSG+F VVN
Sbjct: 598 CDWNTLRKSINRFGLRNSLLVAPMPTASTAQILGNNESIEPFTSNLYQRRVLSGDFQVVN 657
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
KH++ L E GLW+ ++ +++ + GSVQ I P ELK ++KT +E+ QK L+DMA DR
Sbjct: 658 KHMVKVLEERGLWTDEMRTELLVNKGSVQAIASFPSELKDVFKTAYELPQKDLIDMAADR 717
Query: 718 GCYIDHSQSLNIHM--DQPNF--GKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDT 773
++D SQSLN+ + + P+ KLT +H HAW RGLKTGMYYLR++AA ++F+V
Sbjct: 718 APFVDQSQSLNLFLCENDPDLKMKKLTRMHMHAWSRGLKTGMYYLRTKAAVAPVQFSVAP 777
Query: 774 SV 775
V
Sbjct: 778 EV 779
>gi|146414790|ref|XP_001483365.1| hypothetical protein PGUG_04094 [Meyerozyma guilliermondii ATCC
6260]
Length = 814
Score = 876 bits (2264), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 427/764 (55%), Positives = 553/764 (72%), Gaps = 32/764 (4%)
Query: 9 KQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMT 68
KQ ++ + L LSY L IEH D V V G+ +T L L AE+ A+ T
Sbjct: 23 KQTKFDPKRLRSLLDTLSYELDIEHLDLDDVVDSVAAGLPATITVDDLLLLTAESLASRT 82
Query: 69 TNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNA 128
T++PDY LA R+ ++ + K + FS I + + + ++ + + KNA
Sbjct: 83 TSYPDYGVLAGRVEMTKIQKLAENLFSANIAKI-------AKIAPNTLSSQLVSVAEKNA 135
Query: 129 ARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAIK 188
++D I + RD++ YF KTL++SYLL E PQ+M MRV++GIH D++SAI+
Sbjct: 136 EKIDGAIDHRRDYELSYFAVKTLQKSYLLVGS----ETPQYMFMRVSLGIHGQDVNSAIE 191
Query: 189 TYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGI 248
TY MSQ++F HASPTLFN+GT LSSCFL+ MK+DSI+GIY TL E A+ISK++GGI
Sbjct: 192 TYTYMSQKYFIHASPTLFNSGTNYNHLSSCFLLAMKEDSIDGIYKTLHETALISKASGGI 251
Query: 249 GVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADI 308
G+ VHNIRA+GS I ++GTS+G+VPMLRVFN+TARYVDQGG KR GAFA+YLEPWHADI
Sbjct: 252 GLHVHNIRASGSRIASSSGTSSGLVPMLRVFNNTARYVDQGGNKRPGAFAIYLEPWHADI 311
Query: 309 FEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFE 368
FE LDL+KNHGKEE RARDLFYALW+PDLFMERV+++ WS F P++APGL +C+G EF+
Sbjct: 312 FEVLDLKKNHGKEEMRARDLFYALWIPDLFMERVRNDEQWSCFSPDQAPGLENCYGEEFK 371
Query: 369 RLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNL 428
RLY YE +G A KVV+AQ LW IL SQIETG PYML+KD CN+KSNQ+NLGTIKSSNL
Sbjct: 372 RLYESYEAKGLAMKVVRAQKLWDAILDSQIETGGPYMLYKDACNEKSNQKNLGTIKSSNL 431
Query: 429 CTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEV 488
C EV+QY+SP E AVCNL S+ALP +V KN FD + L +V
Sbjct: 432 CCEVVQYSSPDEVAVCNLGSVALPMFV--------------------KNDNFDSQLLHKV 471
Query: 489 TGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNK 548
T ++ NLNK+IDV YP+E+AR SN +HRPI +GVQGLAD F+ L +PFDS A++LN
Sbjct: 472 TKVLVNNLNKVIDVTAYPLESARISNKKHRPIAVGVQGLADLFLKLELPFDSPRARELNI 531
Query: 549 DIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRW-DWGGLRDMI 607
+FETIY+ A+ S E+A ++GPYET+ GSP SKG+LQ D+W PSD + DW L+ +
Sbjct: 532 QVFETIYHAAVEASVELAIKDGPYETFAGSPASKGLLQFDLWNHKPSDLYTDWDELKQKV 591
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEM 667
K+G+RNSLLVAPMPTASTSQILG NECFEPYTSNIY+RRVL+GEF VVNK+L+ LTE+
Sbjct: 592 VKSGMRNSLLVAPMPTASTSQILGFNECFEPYTSNIYTRRVLAGEFQVVNKYLVKKLTEL 651
Query: 668 GLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSL 727
LW+ +K++I+ GSV I +IP+ ++ ++KTVW+I Q+T++DMAVDR +ID QSL
Sbjct: 652 NLWNKQMKDRILVAGGSVMNIDEIPQHVRDVFKTVWDILQRTIIDMAVDRAKFIDQLQSL 711
Query: 728 NIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTV 771
NIHM P KLTS HF+AW +GLKTG+YYLR+++A+ AI+FTV
Sbjct: 712 NIHMRNPTKSKLTSCHFYAWKQGLKTGLYYLRTQSASRAIQFTV 755
>gi|13242650|ref|NP_077665.1| EsV-1-180 [Ectocarpus siliculosus virus 1]
gi|13177450|gb|AAK14594.1|AF204951_179 EsV-1-180 [Ectocarpus siliculosus virus 1]
Length = 765
Score = 875 bits (2262), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/810 (53%), Positives = 564/810 (69%), Gaps = 50/810 (6%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MY+ KRDG++E V FDKI+AR+KKL YGL D V ++QKV +GVY GVTT++LD LA
Sbjct: 4 MYITKRDGRKENVLFDKISARIKKLCYGLEPNFVDHVAIAQKVISGVYTGVTTTELDTLA 63
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA M HPDY+ LA RI VS LHK TK+SF ET+ D++ + ++ADDV
Sbjct: 64 AETAAYMAIAHPDYSLLAGRIAVSRLHKETKESFVETMADLHAY---------GMVADDV 114
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+ +I NA LD I Y +D +YD+F FKTLE+SYLLK+ GK+VER QHMLMRVAVGIHK
Sbjct: 115 HTVIQDNAHLLDGAIDYGKDLEYDFFAFKTLEKSYLLKIDGKIVERIQHMLMRVAVGIHK 174
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDI+S ++TY MS+RW THA+PTLFNAGT QLSSCFL+ M+DDS++GIYDTLK+ A
Sbjct: 175 DDIESVLETYTGMSERWMTHATPTLFNAGTVNNQLSSCFLLAMQDDSVDGIYDTLKQTAK 234
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+SV NIRA GSYI+GTNG S+GIVP+LR F TAR+++Q G+RKG+FA+Y
Sbjct: 235 ISKFAGGIGLSVSNIRAKGSYIKGTNGVSDGIVPLLRCFESTARFINQ-AGRRKGSFAMY 293
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LE WHADI EFLDL+KN+G E RARDLFY LWV DLFM RV+++G W+L P++AP L
Sbjct: 294 LEVWHADILEFLDLKKNNGNELMRARDLFYGLWVSDLFMRRVKADGDWTLLSPSDAPDLI 353
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D G +F++ Y KYE G K ++A+ L+ ++++SQIETG PY LFKD CN KSNQ++L
Sbjct: 354 DLHGADFDQAYKKYESNGIG-KTIKARTLFAKVVESQIETGGPYYLFKDACNAKSNQRHL 412
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLC EVIQY+S E AVCNLASI L R+VR +R F
Sbjct: 413 GTIRSSNLCAEVIQYSSKEEIAVCNLASINLVRHVR-------------------ADRTF 453
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DFE+L +NLNK+IDVN+YP+E R SN++HRP G+GVQ L D ++++G PF+S
Sbjct: 454 DFERLHRTAKQAIKNLNKVIDVNFYPLEECRLSNMKHRPCGLGVQALHDVYMVMGFPFES 513
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSD-RWD 599
EA LNK IFETIY+ ++ S E A +GPYE++ GSP S G LQ D+WG D R D
Sbjct: 514 EEAATLNKQIFETIYHGSVEASIERAKIDGPYESFQGSPASFGKLQFDLWGHEVDDSRHD 573
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQIL-GNNECFEPYTSNIYSRRVLSGEFVVVNK 658
W + + K G+RNSLL A MPTAS++ G E E T+ +Y+RRVLSGEF +VNK
Sbjct: 574 WTKTKADLQKYGMRNSLLTALMPTASSASFCSGGTEAAECSTAVLYNRRVLSGEFPIVNK 633
Query: 659 HLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRG 718
+L+ +L +GLW +KN II GSVQ I IPE+ + ++K VWE+ QK +++ A RG
Sbjct: 634 YLIKELINLGLWDGEMKNAIIRGGGSVQGIESIPEKTRTLFKNVWEVSQKAIIEQAAARG 693
Query: 719 CYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE 778
YID SQS+NI ++P K++S ++ W GLKT YY+RSR AD ++FTV +
Sbjct: 694 PYIDQSQSMNIFFERPTMAKISSALYYGWELGLKTASYYVRSRPVADPVQFTVSSE---- 749
Query: 779 NPKVTDDDDAKMAQMVCSLTNREECMACGS 808
K +++DAK EC+ C +
Sbjct: 750 --KSVNEEDAK------------ECLDCSA 765
>gi|448527129|ref|XP_003869437.1| Rnr3 ribonucleotide reductase large subunit [Candida orthopsilosis
Co 90-125]
gi|380353790|emb|CCG23302.1| Rnr3 ribonucleotide reductase large subunit [Candida orthopsilosis]
Length = 819
Score = 875 bits (2262), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/751 (55%), Positives = 539/751 (71%), Gaps = 17/751 (2%)
Query: 22 LKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARI 81
L K +GL H + + +G+ +T +L A+E A+ +HPDYA A R+
Sbjct: 21 LVKFCHGLDTVHVKLDDIVTSILSGLPDSITIHELYNFASEVIASRIIHHPDYAIFAGRM 80
Query: 82 VVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDF 141
V L +FSE I+ + N R G + I+D Y+I++K+ + D I
Sbjct: 81 VAHLLQLQIPYTFSENIERLKQTTNAR-GKQYSQISDKFYEIVVKHREQFDEIIEKTEKI 139
Query: 142 DYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHA 201
+ YFG KTLE SYL ++ KV E P++M +RVA+ IH DDI++ +TY +MSQ+ F HA
Sbjct: 140 ELAYFGIKTLENSYLWRIDDKVAETPEYMFLRVAIEIHYDDIEAVEETYELMSQKHFIHA 199
Query: 202 SPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSY 261
SPTL+NAG LSSCFL+ MKDDSI+GIY TL E A+ISK++GGIG+ +HNIRA GS+
Sbjct: 200 SPTLYNAGCEYNYLSSCFLLAMKDDSIDGIYQTLHEAALISKASGGIGIHIHNIRAQGSH 259
Query: 262 IRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKE 321
I TNG S G+VPMLRVFN+TARYVDQGGGKR GAFA+Y+EPWHADIF+ L++RKNHG E
Sbjct: 260 ISSTNGRSGGVVPMLRVFNNTARYVDQGGGKRPGAFAIYMEPWHADIFDILNMRKNHGNE 319
Query: 322 EHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAK 381
E R RDLFY LW+PDLFM+RV+S WSLF P+ APGL+D +G+EF ++Y KYE +G A
Sbjct: 320 ELRTRDLFYGLWIPDLFMQRVKSGDDWSLFSPDIAPGLSDVYGSEFVKMYEKYETQGLAS 379
Query: 382 KVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTET 441
++AQ LW IL+SQ ETG PYML+KD CN+K+NQ NLGTIKSSNLC E+++Y++P ET
Sbjct: 380 ATIKAQKLWLAILESQTETGGPYMLYKDACNQKTNQSNLGTIKSSNLCCEIVEYSAPDET 439
Query: 442 AVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIID 501
AVCNLAS+ LP ++R +E FDF+KL VT +VT NLNK+ID
Sbjct: 440 AVCNLASLGLPSFLRSTDDCIE----------------FDFDKLHSVTKVVTRNLNKVID 483
Query: 502 VNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRT 561
V YPVE+A SN R+RPI +GVQGLAD F+ L +PFDS EA++LN IFETIY+ A+
Sbjct: 484 VTRYPVESAETSNKRNRPIALGVQGLADLFLELRLPFDSQEAKKLNSQIFETIYHAAVEA 543
Query: 562 SSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPM 621
S E+A + PY T+ GSP SKG LQ DMW P DW L+D + G+RNSLL+APM
Sbjct: 544 SIELAKLDEPYFTFAGSPASKGTLQFDMWNHKPEFYDDWDQLKDDVKNYGMRNSLLIAPM 603
Query: 622 PTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYD 681
PTASTSQILG NECFEPYTSN+Y+RRV+SGEF VVNK+L+ DL+++G+W+ ++N+II D
Sbjct: 604 PTASTSQILGFNECFEPYTSNLYTRRVISGEFQVVNKYLIKDLSDLGIWNSAMRNRIIQD 663
Query: 682 DGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTS 741
GS+Q I IP+++K +Y+TVWE+KQK ++DMA DRG +ID SQS+NI+M P GKLTS
Sbjct: 664 GGSIQDISVIPKDIKELYRTVWELKQKDIIDMAADRGKFIDQSQSMNIYMQNPTIGKLTS 723
Query: 742 LHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
HF+AW +GLKTGMYYLR++AA AI+FTVD
Sbjct: 724 CHFYAWEKGLKTGMYYLRTQAATRAIQFTVD 754
>gi|299472902|emb|CBN80471.1| EsV-1-180 [Ectocarpus siliculosus]
Length = 766
Score = 874 bits (2258), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 435/810 (53%), Positives = 567/810 (70%), Gaps = 49/810 (6%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MY+ KRDG++E V FDKI+AR+KKL YGL + D V ++QKV +GVY GVTT++LD LA
Sbjct: 4 MYITKRDGRKENVLFDKISARIKKLCYGLDSRYVDHVAIAQKVISGVYAGVTTTELDTLA 63
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA M +HPDY+ LA RI VS+LHK TK+SF ET+ D++++ ++ADDV
Sbjct: 64 AETAAYMAISHPDYSLLAGRIAVSSLHKETKESFVETMADLHDY---------GMVADDV 114
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+ I NA LD I Y +D +YD+F FKTLE+SYLLK+ G +VER QHMLMRVAVGIHK
Sbjct: 115 HAAIQDNAHLLDGAIDYGKDLEYDFFAFKTLEKSYLLKIDGNIVERIQHMLMRVAVGIHK 174
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDI+S + TY +S+RW THA+PTLFNAGT QLSSCFL+ M+DDS++GIYDTLK+ A
Sbjct: 175 DDIESVLDTYTELSERWMTHATPTLFNAGTVNNQLSSCFLLAMQDDSVDGIYDTLKQTAK 234
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+SV NIRA GSYI+GTNG S+GIVP+LR F TAR+++Q G+RKG+FA+Y
Sbjct: 235 ISKFAGGIGLSVSNIRAKGSYIKGTNGVSDGIVPLLRCFESTARFINQ-AGRRKGSFAMY 293
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LE WHADI EFLDL+KN+G E RARDLFY LWV DLFM RV+++G W+L P++AP L
Sbjct: 294 LEMWHADILEFLDLKKNNGNELMRARDLFYGLWVSDLFMHRVKADGDWTLLSPSDAPDLI 353
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D G +F+R Y KYE +G K ++A+ L+ ++++SQIETG PY LFKD+CN KSNQQ+L
Sbjct: 354 DLHGADFDRAYEKYESDGIG-KTIKARTLFAKVVESQIETGGPYYLFKDSCNAKSNQQHL 412
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTI+SSNLC EVIQY+S E AVCNLASI L R+V+ ++ F
Sbjct: 413 GTIRSSNLCAEVIQYSSKEEIAVCNLASINLVRHVK-------------------PDKTF 453
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DFE+L + +NLNK+ID N+YP+E SN++HRP G+GVQ L D F+++G PF+S
Sbjct: 454 DFERLHKTAKQAIKNLNKVIDANFYPLEECSLSNMKHRPCGLGVQALHDVFMVMGFPFES 513
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSD-RWD 599
EA LNK IFETIY+ ++ S E A +GPYE++ GSP S G LQ D+WG D R D
Sbjct: 514 EEAATLNKQIFETIYHGSVEASIERAKIDGPYESFQGSPASFGKLQFDLWGHEVDDSRHD 573
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQIL-GNNECFEPYTSNIYSRRVLSGEFVVVNK 658
W +R + G+RNSLL A MPTAS++ G E E T+ +Y+RRVLSGEF +VNK
Sbjct: 574 WTKIRGDLKTYGMRNSLLTALMPTASSASFCSGGTEAAECSTAVLYNRRVLSGEFPIVNK 633
Query: 659 HLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRG 718
+L+ +L ++GLW +KN II GSVQ I IPE+ + ++K VWE+ QK +++ A RG
Sbjct: 634 YLIRELIKLGLWDGEMKNAIIRGGGSVQGIESIPEKTRMLFKNVWEVSQKAVIEQAAARG 693
Query: 719 CYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE 778
YID SQS+NI ++P K++S F+ W GLKT YY+RSR AD ++FTV E
Sbjct: 694 PYIDQSQSMNIFFERPTVAKISSALFYGWKLGLKTASYYVRSRPVADPVQFTVS----PE 749
Query: 779 NPKVTDDDDAKMAQMVCSLTNREECMACGS 808
P V D++D K EC+ C +
Sbjct: 750 EP-VGDEEDDK------------ECLDCSA 766
>gi|90592870|ref|YP_529823.1| RR1 [Agrotis segetum nucleopolyhedrovirus]
gi|71559320|gb|AAZ38319.1| RR1 [Agrotis segetum nucleopolyhedrovirus]
Length = 779
Score = 870 bits (2249), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/801 (51%), Positives = 569/801 (71%), Gaps = 33/801 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
++V++RDG ++ VH I A ++ L + L+ ++ + +V+ + G+ G+TT +L+ A
Sbjct: 3 LHVIRRDGSRKEVHLHDIKAGIETLCFNLNKQYVNAAVVALNIMKGIRPGITTEELNVYA 62
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
A+ A+MT H D+A LA RI+V +LH SFSE + +++ H L++D++
Sbjct: 63 ADVVASMTYIHHDFAVLAGRILVDDLHNKIDASFSEVVFNLHRH---------KLVSDEL 113
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
++ + ++ I + D+ Y +FG+KTLE YLLK+ +V ERPQHMLMRVA+GIH
Sbjct: 114 ASVVESHGDEINEAIDHAVDYTYKFFGYKTLENGYLLKIDNQVAERPQHMLMRVALGIHG 173
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDI AI+TY MMS++ FTHASPTLF+AGTP AQ+ SCFL+ ++ DSI+GIY+TL +CA
Sbjct: 174 DDIQDAIETYRMMSRKMFTHASPTLFSAGTPMAQMCSCFLLGIRSDSIDGIYETLGDCAA 233
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK GG+GV+VH +R+ G+ I TNG ++G+ PM+RVFN+ R+VDQGG KRKGA AVY
Sbjct: 234 ISKYGGGLGVNVHCVRSRGTRINSTNGVASGVEPMVRVFNNMVRHVDQGG-KRKGALAVY 292
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWHADI+ L+L++N G E+ +ARDL YALWVPDLFMERV +NG+WSL CPN+ PGL+
Sbjct: 293 IEPWHADIYSVLNLKRNMGAEDCKARDLMYALWVPDLFMERVNANGVWSLMCPNKCPGLS 352
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G+ FE LY KYE+EG+ ++ V+AQ+L I+++Q+ETG PYML+KD CN+KSNQQNL
Sbjct: 353 DCYGSAFEELYRKYEEEGRYQQQVRAQDLHRFIVETQVETGGPYMLYKDACNRKSNQQNL 412
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLC E++QY+ ETAVCNLASIA+ V V E+ F
Sbjct: 413 GTIKCSNLCAEIVQYSDAEETAVCNLASIAVNSCV----VVDEAR--------------F 454
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DFEKL +T +V NLNKIID N YP+E+AR SN++HRPIG+G+QGLAD F+LL MP++S
Sbjct: 455 DFEKLRHITKVVVRNLNKIIDRNRYPIESARMSNMKHRPIGVGIQGLADAFVLLRMPYES 514
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA LN+ I ETIY+ AL S E+A G Y ++ GSP S+GILQ DMW V P+ WDW
Sbjct: 515 DEAMLLNRQIAETIYFGALEASCELAKTWGSYSSFQGSPASEGILQYDMWDVRPTSLWDW 574
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
G L++ I K+G+RNSLLVA MPTA+T+QILGNNE FEP+TSN+Y RRVL+GEF VVN++L
Sbjct: 575 GTLKEDIKKHGLRNSLLVAYMPTATTAQILGNNESFEPFTSNVYLRRVLAGEFQVVNQYL 634
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
+ DL ++ L++ ++N I GS+Q I IP+ +K +YKT WE+K K +++MA DR +
Sbjct: 635 IDDLIKLKLYTSEMRNAIFAHKGSIQAIDGIPDHIKRLYKTAWEMKCKRMIEMAADRNAF 694
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLN+ + +P + +TS+H + W GLKTGMYYLR++ AA +FTV+ E
Sbjct: 695 IDQSQSLNLFVAEPTYALMTSIHDYTWRSGLKTGMYYLRTKPAAHTQQFTVEQQFTVERG 754
Query: 781 KVT-----DDDDAKMAQMVCS 796
V ++ D AQ VC+
Sbjct: 755 DVCKKRKINNYDEDAAQNVCA 775
>gi|406707527|ref|YP_006757879.1| ribonucleoside-diphosphate reductase subunit alpha [alpha
proteobacterium HIMB59]
gi|406653303|gb|AFS48702.1| ribonucleoside-diphosphate reductase, alpha subunit [alpha
proteobacterium HIMB59]
Length = 912
Score = 864 bits (2232), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/810 (51%), Positives = 563/810 (69%), Gaps = 44/810 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V KRDG +E + +KIT R+ LS GL I DP+ ++QK G+Y G+TT+++D
Sbjct: 145 MAVTKRDGHKEDISLEKITNRISVLSNGLEI---DPITIAQKAIQGLYDGITTNEIDTYL 201
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAAA+T HPDY+ LA RI + LHK T F K+++ + L+ ++
Sbjct: 202 AETAAALTVEHPDYSYLAGRIKANALHKETP-GFIIATKNLF---------EDGLLREEY 251
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y M +A ++ I YDRD+ +DYF TL R+YLL+ K +ERPQ + MRVA+ +
Sbjct: 252 YQKAMAHAEDIEKIIDYDRDYLFDYFALTTLFRAYLLQFNNKTIERPQDLWMRVALCVSG 311
Query: 181 DDID--SAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKEC 238
D D KTY +SQ +THA+PTLFN+G QLSSCFL+ M+DDSIEGI++T+K+C
Sbjct: 312 DKFDFYQVKKTYDSLSQGLYTHATPTLFNSGLKMQQLSSCFLIGMEDDSIEGIFNTVKDC 371
Query: 239 AIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA 298
A+ISK+AGGIG+ HNIRA GS I+ TNG SNG++P L++FN+TAR VDQGGGKRKG+FA
Sbjct: 372 ALISKTAGGIGLHAHNIRAGGSRIKSTNGKSNGLIPFLKIFNETARSVDQGGGKRKGSFA 431
Query: 299 VYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPG 358
VYLEPWHADI FL+LRKN G EE RARDLFYALW+PDLFM+RV+ +G W+L +E PG
Sbjct: 432 VYLEPWHADIEAFLELRKNTGAEEFRARDLFYALWIPDLFMQRVEEDGEWTLMSEHECPG 491
Query: 359 LADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQ 418
L++ +G+EF LYTKYEKE K V+A+ L +I+++QIETG PYML+KD+ N KSNQ+
Sbjct: 492 LSNTYGSEFVELYTKYEKEMPDLKRVKARALMSKIIEAQIETGQPYMLYKDSINNKSNQK 551
Query: 419 NLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNR 478
N+G IKSSNLC E+++Y+ ETAVCNLASIALP++V E G
Sbjct: 552 NIGVIKSSNLCAEIVEYSEKDETAVCNLASIALPKFVTEDG------------------- 592
Query: 479 YFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPF 538
+D++ L ++ + T+NL+++ID+N+YP + + SN RHRPIG+G+QGLAD + + + +
Sbjct: 593 KYDYQNLYQIAKLATKNLDQVIDINFYPTDKTQNSNSRHRPIGLGIQGLADVYFKMNLAY 652
Query: 539 DSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRW 598
DS +AQ +NK IFETIY+ AL S E+AA +G Y T+ GSP+S+G Q D+WGV PS+ W
Sbjct: 653 DSVQAQIINKQIFETIYFGALEASMELAADKGAYSTFQGSPLSQGQFQFDLWGVKPSNMW 712
Query: 599 DWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNK 658
DW GL + I K+GVRNSL A MPTAST ILGN E F+ TSNIY R+ LSGEF++VN+
Sbjct: 713 DWKGLMEKIQKHGVRNSLTTACMPTASTGIILGNTETFQVQTSNIYKRQTLSGEFLLVNR 772
Query: 659 HLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRG 718
+L+ +L GLWS ++++II ++GSVQ I PE+LK +YKTVWE QKT++DMA +R
Sbjct: 773 YLVKELMARGLWSKELRDQIILENGSVQNIEGFPEDLKEVYKTVWETSQKTVIDMAAERA 832
Query: 719 CYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE 778
+ID +QS+N+ + P FGK+ S+H +AW +GLKTGMYYLRSR+A DA+K TV +
Sbjct: 833 PFIDQTQSMNLWLATPTFGKVNSMHMYAWKKGLKTGMYYLRSRSAVDAVKVTVSSE---- 888
Query: 779 NPKVTDDDDAKMAQMVCSLTNREECMACGS 808
K + K AQ E+C+ C +
Sbjct: 889 --KKAKETYVKEAQS----NEPEDCLTCSA 912
>gi|322511018|gb|ADX06331.1| putative ribonucleotide reductase large subunit A [Organic Lake
phycodnavirus 2]
Length = 831
Score = 859 bits (2219), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 425/865 (49%), Positives = 579/865 (66%), Gaps = 94/865 (10%)
Query: 2 YVVKRDGKQEAVHFDKITARLKKL--SYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDEL 59
YV+KR+ ++E + +DKI R KKL Y L I++ VL K+ +Y + T ++DEL
Sbjct: 3 YVIKRNERKELLSYDKILERTKKLGDKYNLEIQYSGLVL---KIIDQLYNNIKTCEIDEL 59
Query: 60 AAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADD 119
AE A+M + H DY+ LA I VSN HK TK + E+++ + Y ++
Sbjct: 60 MAEQCASMGSIHYDYSKLAGYICVSNHHKETKHTLLESVQLLSKKY----------LSTR 109
Query: 120 VYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIH 179
Y I+ K+ L+ I+Y+R+F DYFG+KTLERSYL++ KVVE QH+ MRV++ IH
Sbjct: 110 YYSIVEKHHKELEHMIVYERNFLIDYFGYKTLERSYLMRNNNKVVENIQHLWMRVSIEIH 169
Query: 180 KDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECA 239
+++D +TY +S++ F HA+PTL+N+GT R QLSSC+L+ M+DDSI+GI++TL ECA
Sbjct: 170 GENLDKVKETYDGLSKKLFIHATPTLYNSGTRRPQLSSCYLLGMEDDSIDGIFNTLHECA 229
Query: 240 IISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAV 299
ISK AGGIG+ +HN+R+ G++I GTNG SNGIVPMLRVFN+TARYVDQGGGKR G+FA+
Sbjct: 230 SISKWAGGIGLHIHNVRSKGTHISGTNGKSNGIVPMLRVFNNTARYVDQGGGKRNGSFAI 289
Query: 300 YLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGL 359
YLEPWH DI EFL+LRKNHG+EE RARDLFYALWVPDLFM +++ + W L CPN+ GL
Sbjct: 290 YLEPWHGDIEEFLELRKNHGEEEMRARDLFYALWVPDLFMNKIEKDDDWYLMCPNQCEGL 349
Query: 360 ADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQN 419
++ +G FE LY +Y EGK K ++A+ LWF+IL SQ+ETGTPYML+KD CNKKSNQ+N
Sbjct: 350 SELYGESFEALYNQYVSEGKYLKKMKARELWFKILDSQMETGTPYMLYKDACNKKSNQKN 409
Query: 420 LGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMG-------------------- 459
LGTI+SSNLC E+I+Y+ E+AVCNLASI+L +V+
Sbjct: 410 LGTIRSSNLCCEIIEYSDKEESAVCNLASISLSSFVKPSKYKFKGNVNVYTKEKCKWCYY 469
Query: 460 ----------------VPMESHPSKLVGSRGSKNRYFDFEKLA----------------- 486
+P + + S L + D EK+
Sbjct: 470 LKHLLDHHKIIYTTHLIPEKEYDSFLKEHTTFPQLFVDQEKIGGFSKVNELLTPWFDYKG 529
Query: 487 --EVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQ 544
++T IVTENLN IIDVNYYP E R SN +HRPIGIGVQGLADTF ++ + FDS +A+
Sbjct: 530 LHKITKIVTENLNNIIDVNYYPTEKTRLSNKKHRPIGIGVQGLADTFAMMNVAFDSNDAK 589
Query: 545 QLNKDIFETIYYHALRTSSEIAA-REGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGL 603
Q+NKDIFET+Y+ ++ S E+A ++GPY+++ GSP+S+GI Q D+W V PS++++W L
Sbjct: 590 QINKDIFETMYHASMEKSMELAKEKQGPYDSFDGSPLSQGIFQFDLWNVTPSNKYNWDKL 649
Query: 604 RDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHD 663
R+ I + G NSL +APMPTASTSQIL NNECFEP+TSN+Y+RR L+GEF+V+NKHL+ +
Sbjct: 650 RNNIMEFGTYNSLCLAPMPTASTSQILSNNECFEPFTSNMYTRRTLAGEFMVINKHLMKE 709
Query: 664 LTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDH 723
L ++ +W+ IKN+I+ GS+Q I +IP+ +K YK VWE+ K+++DMA DRG YI
Sbjct: 710 LIDLNIWNSSIKNEIVKHKGSIQTIKEIPDYIKQKYKIVWEMSMKSIIDMAKDRGAYICQ 769
Query: 724 SQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVT 783
SQS+N+ ++ PN+ LT++H +AW GLKTGMYYLR +A A +FTV V
Sbjct: 770 SQSMNLWVEDPNYKILTNMHLYAWKSGLKTGMYYLRRKAKHQAQQFTV----------VP 819
Query: 784 DDDDAKMAQMVCSLTNREECMACGS 808
D +D EC+ CGS
Sbjct: 820 DKEDP-------------ECLMCGS 831
>gi|255713718|ref|XP_002553141.1| KLTH0D09922p [Lachancea thermotolerans]
gi|238934521|emb|CAR22703.1| KLTH0D09922p [Lachancea thermotolerans CBS 6340]
Length = 867
Score = 856 bits (2212), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 420/797 (52%), Positives = 560/797 (70%), Gaps = 50/797 (6%)
Query: 3 VVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAE 62
V R+G+ + + LK+L+ GL IE D VS+++ V T S + + E
Sbjct: 7 VSDRNGEANKLTSQALAQSLKQLAGGLQIEDADFDAVSRRILDAVPPSATHSSVVQFGGE 66
Query: 63 TAAAMTTNHPDYASLAARIVVSNLHKNTKK-SFSETIKDMYNHYNERSGLKAP------- 114
AAM+T HPD+A+LAAR +S LHK + SF+E + + RS KAP
Sbjct: 67 VLAAMSTTHPDFANLAARWEISELHKKLQGLSFTENLALLQKL---RSSSKAPTVKRHKT 123
Query: 115 --------LIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVV-E 165
LI+ Y++ ++ LD+ I DRDFD+ YFG+KTL +SYL+K + + E
Sbjct: 124 STSHNDKNLISAAFYEMALRYQTTLDAAIQPDRDFDFSYFGWKTLSKSYLIKRKNEETHE 183
Query: 166 RPQHMLMRVAVGIH--KDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCM 223
PQ + MRVA+ IH + DID+ ++TY +MS+++F HASPTLFNAGT LSSCFLV M
Sbjct: 184 TPQFLFMRVALAIHGPRGDIDAVLETYDLMSRKFFIHASPTLFNAGTVNQYLSSCFLVAM 243
Query: 224 KDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTA 283
+DSI+GIY TL + A+ISK++GG+GV V N+R TG+YI G+NGTSNG+VPMLRVFN+TA
Sbjct: 244 IEDSIDGIYRTLHKTAMISKASGGVGVHVSNVRGTGAYISGSNGTSNGLVPMLRVFNNTA 303
Query: 284 RYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQ 343
RYVDQGG KR GAF +YLEPWH+D+ +FL LRKN GKEE RARDLF ALW+PDLFMERV+
Sbjct: 304 RYVDQGGNKRPGAFCIYLEPWHSDVLDFLQLRKNQGKEELRARDLFLALWIPDLFMERVE 363
Query: 344 SNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTP 403
NG W LF P+EAPGL +C+G EF++LY YEK K + AQ LW EIL+SQ+ETG P
Sbjct: 364 QNGSWCLFSPDEAPGLQECFGEEFKKLYETYEKTLAPAKKMPAQKLWSEILQSQVETGGP 423
Query: 404 YMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYV---REMGV 460
+ML+KD+CN KSNQ+NLGTIKSSNLC E++QY+SP+ETAVCNLAS+ALP +V RE +
Sbjct: 424 FMLYKDSCNNKSNQKNLGTIKSSNLCCEIVQYSSPSETAVCNLASVALPSFVKLQREQAI 483
Query: 461 PMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPI 520
FDFE L ++ ++T+NL+ +ID+ YPVE A+ SN ++RPI
Sbjct: 484 -------------------FDFESLHKIVKVLTKNLDSVIDICDYPVEDAKFSNEKNRPI 524
Query: 521 GIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPV 580
IGVQGLAD ++L +PF S A+ LNK IFETIY+ A+ TS E + + GPY ++ SPV
Sbjct: 525 AIGVQGLADALMILRIPFHSESARVLNKQIFETIYHAAVETSIERSKKLGPYPSFDNSPV 584
Query: 581 SKGILQPDMWGVNPSDRW-----DWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNEC 635
S+G Q D+WG+N D + DW +R+ + ++G+RNSLLV PMPTASTSQILG E
Sbjct: 585 SRGEFQFDLWGLN-DDNYEFLFSDWKEMREKVKQHGIRNSLLVGPMPTASTSQILGFTES 643
Query: 636 FEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEEL 695
FEP TSNIY+RRVLSGEF V+NK+++ D +G+W+ +KN+II +GS+Q I IP L
Sbjct: 644 FEPMTSNIYTRRVLSGEFTVINKYMVDDFCRLGIWNEKLKNRIIEQNGSIQGIEGIPSNL 703
Query: 696 KAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGM 755
K +Y+TVWEI Q+ ++D++ DRG +ID SQSLN+ + +P GKLTS+HF+ W +GLKTGM
Sbjct: 704 KELYRTVWEIPQRVMIDLSADRGPFIDQSQSLNLFLREPTMGKLTSMHFYGWKKGLKTGM 763
Query: 756 YYLRSRAAADAIKFTVD 772
YYLR++AA+ AIKFT++
Sbjct: 764 YYLRTQAASGAIKFTIN 780
>gi|254584212|ref|XP_002497674.1| ZYRO0F10956p [Zygosaccharomyces rouxii]
gi|238940567|emb|CAR28741.1| ZYRO0F10956p [Zygosaccharomyces rouxii]
Length = 875
Score = 854 bits (2206), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 419/776 (53%), Positives = 570/776 (73%), Gaps = 39/776 (5%)
Query: 21 RLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAAR 80
+L++LS+GL++++ D + QK+ +GV V Q+ AAET A++T+ HPD++ LAAR
Sbjct: 25 KLRELSFGLNLDYLDFDKIVQKISSGVPDDVEGWQVIRHAAETVASLTSIHPDHSILAAR 84
Query: 81 IVVSNLHKNTKK-SFSETIKDMYNHYNERSG------------LKAP---LIADDVYDII 124
+ + LHK+ + +F+E +K + + S ++AP +I+++ +
Sbjct: 85 LEIDELHKSLRGITFTENLKQLRSSTRVTSEGDNRVPSKRQKVMRAPKKGVISEEFLQMA 144
Query: 125 MKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQG-KVVERPQHMLMRVAVGIHK--D 181
+K +L+ I+++RDF++ YFG+KTL +SYL+K ++ E PQ + MRVA+ IH +
Sbjct: 145 LKYEKKLNDAIVHERDFNFTYFGWKTLCQSYLIKKNADQIHETPQFLFMRVALAIHGPFE 204
Query: 182 DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAII 241
DIDS I+TY +MS+++F HASPTLFNAGT LSSCFLV MK+DSIEGI+ TL++ A+I
Sbjct: 205 DIDSVIETYELMSRKYFIHASPTLFNAGTVNQYLSSCFLVGMKEDSIEGIFKTLEDTALI 264
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SK++GGIG+ V NIRA+G+++ G+NGTSNGIVPMLRVFN+TARYVDQGG KR GA+ +YL
Sbjct: 265 SKASGGIGIHVSNIRASGAHVSGSNGTSNGIVPMLRVFNNTARYVDQGGNKRPGAYCIYL 324
Query: 302 EPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLAD 361
EPWH+D+F+FL LRKNHGK+E RARDLF+ALW+PDLFM+RVQ NG WSLF P+EAPGL+D
Sbjct: 325 EPWHSDVFDFLQLRKNHGKDELRARDLFFALWIPDLFMKRVQCNGEWSLFSPDEAPGLSD 384
Query: 362 CWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG 421
+G EFE LY +YE K V+AQ LW EIL++Q+ETG P+ML+KD+CN KSNQ+NLG
Sbjct: 385 VYGKEFEELYEQYEATALPMKRVKAQKLWSEILQAQVETGGPFMLYKDSCNLKSNQKNLG 444
Query: 422 TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFD 481
TIKSSNLC E+++Y+S ETAVCNLAS+ALP +V + V ++GS FD
Sbjct: 445 TIKSSNLCCEIVEYSSKDETAVCNLASVALPTFVVQ------------VTNKGS---IFD 489
Query: 482 FEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDST 541
F KL V +T NL+++IDV YP+ A+ SNLR+RP IGVQGLAD F++L +P++S
Sbjct: 490 FVKLHAVVKTITRNLDRVIDVCKYPIPQAQYSNLRNRPEAIGVQGLADVFLMLRIPYESQ 549
Query: 542 EAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSD----R 597
EA+ LN IFETIY+ A+ TS E+A G YET+ GSP S+G+LQ D+WG+N +
Sbjct: 550 EARILNTQIFETIYHAAVETSIELAEEYGAYETFQGSPASQGLLQFDLWGLNEDNYDFLY 609
Query: 598 WDWGGLRDMISKN-GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVV 656
DWG L+ I G+RNSLL+ PMPTASTSQILG E FEP TSN+Y+RRVLSGEF+ V
Sbjct: 610 RDWGELKHRIQNGRGLRNSLLLGPMPTASTSQILGYTESFEPMTSNVYARRVLSGEFINV 669
Query: 657 NKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVD 716
N++++ ++G+W+ +KN+II D+GSVQ I +P+ +K IY+TVWEI Q+ L+DMA D
Sbjct: 670 NQYMVDHFCQLGIWNEKLKNRIIADNGSVQNIQGLPDWIKKIYRTVWEIPQRPLIDMARD 729
Query: 717 RGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
R +ID SQSLN+ M P GKLTS+HFHAW GLKTGMYYLR++AA+ AI+FTV+
Sbjct: 730 RSPFIDQSQSLNLFMKTPTMGKLTSMHFHAWRHGLKTGMYYLRTQAASAAIQFTVN 785
>gi|322510749|gb|ADX06063.1| putative ribonucleotide diphosphate reductase, large subunit
[Organic Lake phycodnavirus 1]
Length = 824
Score = 846 bits (2185), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 415/820 (50%), Positives = 565/820 (68%), Gaps = 60/820 (7%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKK--LSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDE 58
++V+KR+ K+E + +DKI R+ K + Y L+I+ VL KV ++ + TSQ+DE
Sbjct: 2 IHVLKRNSKKEVLSYDKILERVNKFIVKYNLNIQGSGLVL---KVIDQLHDNIKTSQIDE 58
Query: 59 LAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIAD 118
L AE A+M T H DY+ LA I +SN HK TK++ E++ + K ++D
Sbjct: 59 LLAEQCASMGTIHYDYSKLAGYICISNHHKETKRTLFESVNILCT--------KKGYLSD 110
Query: 119 DVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGI 178
+ Y+I+ ++ L++ I+YDR++ DYFG+KTLER+YL++ V+E QH+ MRVAV I
Sbjct: 111 NYYNIVKEHHKELETMIVYDRNYLIDYFGYKTLERAYLMRNDNMVIENIQHLWMRVAVQI 170
Query: 179 HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKEC 238
H + + TY +S++ F HA+PTL+NAGT R QLSSC+L+ M++DSI+GI++TL++C
Sbjct: 171 HGNCLPKVKDTYDGLSKKLFIHATPTLYNAGTTRPQLSSCYLLGMEEDSIDGIFNTLRDC 230
Query: 239 AIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA 298
A ISK AGGIG+ +HN+RA G+ I GTNGTSNGIVPMLRVFN+TARYVDQGGGKR G+FA
Sbjct: 231 ASISKWAGGIGLHIHNVRAKGTSILGTNGTSNGIVPMLRVFNNTARYVDQGGGKRNGSFA 290
Query: 299 VYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPG 358
+YLEPWH DI EFL+LRKNHG EE RARDLFYALW+PDLFM +++ + W L CP+
Sbjct: 291 MYLEPWHGDILEFLELRKNHGDEEMRARDLFYALWIPDLFMRKIEHDEDWYLMCPHICKH 350
Query: 359 LADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQ 418
L + +G EFE LY Y G+ K ++A+ LWF IL SQ+ETGTPYML+KD CN+KSNQ+
Sbjct: 351 LDNVYGEEFETLYESYVSSGQYLKKMKARELWFHILDSQMETGTPYMLYKDACNQKSNQK 410
Query: 419 NLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVRE--------------------- 457
N+GTIKSSNLC E+I+Y+ E+AVCNLASI+L +V++
Sbjct: 411 NIGTIKSSNLCCEIIEYSDKDESAVCNLASISLSSFVKKSKFKLNGPIVVYAKENCKWCD 470
Query: 458 ----------------MGVPMESHPSKLVGSRGSK---------NRYFDFEKLAEVTGIV 492
M V +P G + FD+ L ++T +V
Sbjct: 471 YLKSFLDSIKINYEVVMDVRQTMYPQLYAGDKKIGGFSDVISLFKSTFDYNGLHKITKMV 530
Query: 493 TENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFE 552
TENLN+IIDVNYYP + R+SNL+HRPIGIGVQGLAD F +L + FDS EA+++NK IFE
Sbjct: 531 TENLNRIIDVNYYPTDKTRQSNLKHRPIGIGVQGLADVFAMLNIAFDSDEAKEINKMIFE 590
Query: 553 TIYYHALRTSSEIAA-REGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNG 611
T+Y+ +L S E+A ++ Y ++ GSP+S+GILQ DMW V PS R+DWG L+ I K G
Sbjct: 591 TMYHASLEKSMEMAKEQQTQYASFKGSPLSEGILQFDMWNVTPSKRYDWGALKQNIIKYG 650
Query: 612 VRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWS 671
NSL +APMPTASTSQIL NNECFEP+TSN+Y+RR L+GEF+V+NKHL+ +L ++ +W+
Sbjct: 651 TMNSLCMAPMPTASTSQILSNNECFEPFTSNMYTRRTLAGEFMVINKHLMKELIDLNIWN 710
Query: 672 PIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHM 731
IKN I+ GS+Q I +IP+ +KA YK VWE+ KT++DM+ DRG YI SQS+N+ +
Sbjct: 711 MSIKNDILKYKGSIQSIAEIPDYIKAKYKIVWEMSMKTIMDMSKDRGAYICQSQSMNLWV 770
Query: 732 DQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTV 771
++PN+ LT++H +AW GLKTGMYYLR +A A +FTV
Sbjct: 771 EEPNYKTLTNMHLYAWKCGLKTGMYYLRRKAKHHAQQFTV 810
>gi|303391084|ref|XP_003073772.1| ribonucleoside diphosphate reductase [Encephalitozoon intestinalis
ATCC 50506]
gi|303302920|gb|ADM12412.1| ribonucleoside diphosphate reductase [Encephalitozoon intestinalis
ATCC 50506]
Length = 768
Score = 845 bits (2184), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/800 (50%), Positives = 561/800 (70%), Gaps = 42/800 (5%)
Query: 9 KQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMT 68
K E + D + ++++ + L ++H + + +K+ +G + +T ++ + +ETAA+M
Sbjct: 11 KSEKLKIDMVRGQIEEYTNLLKLQHVNVDELMEKIASGWCEDMTRKEIVDYCSETAASMI 70
Query: 69 TNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNA 128
T HP+Y +++RI+VS +H T SF E IK + + I++++Y II++NA
Sbjct: 71 TKHPEYGWISSRIIVSYIHDITMDSFVEKIKYIQKYQG--------TISEEMYKIIVENA 122
Query: 129 ARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAIK 188
+DS I Y++DF ++YFG TL +SYL+KV ++VERPQ + MR A+ +HK D +
Sbjct: 123 EIIDSIIDYEKDFLFNYFGILTLMKSYLIKVGEEIVERPQDVFMRTALQVHKSDFGKVKE 182
Query: 189 TYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGI 248
TY M+S+ +FTHA+PTL+N+ AQL+SCFL+ ++DSIEG+Y + + AII+K +GGI
Sbjct: 183 TYEMLSRHYFTHATPTLYNSCLKEAQLASCFLITPREDSIEGVYHMINQTAIITKYSGGI 242
Query: 249 GVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADI 308
G+++H IR+ GS ++ T G SNGI+P+++V N T RY++QG +R G+ A+YLEPWH +I
Sbjct: 243 GLNLHGIRSKGSPLKRTGGKSNGIIPLIQVLNATKRYINQGAERRPGSIAIYLEPWHMEI 302
Query: 309 FEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFE 368
F+FLDLRKN G EE RARD+F ALW+ DLFMERV++N WSLFCP++A GL + WG EF
Sbjct: 303 FDFLDLRKNTGPEEFRARDIFIALWINDLFMERVKNNEEWSLFCPSQAVGLNETWGEEFN 362
Query: 369 RLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNL 428
LY KYEK ++ VV AQ LW I+++QIETGTPYM +KD CN+ SNQQ+LGTIKSSNL
Sbjct: 363 ALYCKYEK-TISRTVVPAQKLWKAIIEAQIETGTPYMCYKDACNRLSNQQHLGTIKSSNL 421
Query: 429 CTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEV 488
C E+++Y+S ET+VCNL SI+LP +V KN+ FDFE L +V
Sbjct: 422 CAEIVEYSSGEETSVCNLGSISLPMFV--------------------KNKKFDFESLKDV 461
Query: 489 TGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNK 548
I+T NLNK+ID NYYPVE ++RSN++HRPIGIGVQGLAD F +L +PFDS EA+ LNK
Sbjct: 462 VRILTINLNKVIDFNYYPVEESKRSNMKHRPIGIGVQGLADLFAILRLPFDSDEARNLNK 521
Query: 549 DIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMIS 608
DIFET+YY AL TS ++A +EGP+E+Y GSP+SKGI ++ G S+ WDW GLR+ I
Sbjct: 522 DIFETMYYSALETSCKLAEKEGPFESYEGSPISKGIFHFELAGKKASNNWDWEGLRERIK 581
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMG 668
K G RNSLL+A MPTA TSQI GNNE FEP+ SNIY+RR +GEF +VNKHL++DL+E+G
Sbjct: 582 KYGTRNSLLIALMPTAGTSQIFGNNETFEPFISNIYTRRTHAGEFQIVNKHLINDLSELG 641
Query: 669 LWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLN 728
LWS +KN II ++GS+Q I IP++++ IYKT WEIK K ++D+A DR ++D SQSLN
Sbjct: 642 LWSYEMKNLIIENEGSIQNITTIPKKIRDIYKTAWEIKMKAVIDLAADRQVFVDQSQSLN 701
Query: 729 IHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDA 788
+ + +P + +LTS+HF+ + GLKTGMYYLR+R AIKFTVD + ++ +D D
Sbjct: 702 VFVAKPTYSQLTSMHFYGYHCGLKTGMYYLRTRPITSAIKFTVDKKLAEKTLSSMNDTD- 760
Query: 789 KMAQMVCSLTNREECMACGS 808
E C C S
Sbjct: 761 ------------EPCSMCSS 768
>gi|385303542|gb|EIF47607.1| ribonucleoside-diphosphate reductase large chain [Dekkera
bruxellensis AWRI1499]
Length = 830
Score = 845 bits (2182), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 416/787 (52%), Positives = 556/787 (70%), Gaps = 25/787 (3%)
Query: 3 VVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAE 62
V K G ++ ++ ++KLS+GL+ ++ V KV G+ +T SQL + AE
Sbjct: 11 VNKXKGSRQRFDRPRLRQYIEKLSHGLNKKYISTDKVLDKVXEGLPDELTVSQLIDFTAE 70
Query: 63 TAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHY----NERSGLKAP---L 115
TAAA+TT+H Y++LAARI+ +L K FS+ ++ + + R GLKA L
Sbjct: 71 TAAALTTSHYQYSNLAARILERHLQKRVPARFSQNLEVLRAYKPGTGRRRKGLKASYKHL 130
Query: 116 IADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVA 175
IA D+Y+++M + +D +I+ +RDFD DYFGF+TLE+SYLLK+ G E PQ +LMRVA
Sbjct: 131 IARDLYELVMAHREEIDRQIVAERDFDIDYFGFRTLEKSYLLKMDGVCHETPQFLLMRVA 190
Query: 176 VGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTL 235
+ +H D + A ++Y +MS+R+ HASPTLFNAGT LSSCFLV ++ DS++GI+ T+
Sbjct: 191 LSLHLDSLSDAFESYDLMSRRFLLHASPTLFNAGTEFPNLSSCFLVGLQSDSLDGIFRTV 250
Query: 236 KECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG 295
CA+ISK+AGGIG+ + N+RA G+YI GTNGTS+GIVPMLRVFN TA+YVDQGG KR G
Sbjct: 251 HGCAMISKAAGGIGMHLSNVRAAGTYISGTNGTSSGIVPMLRVFNSTAKYVDQGGNKRPG 310
Query: 296 AFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNE 355
A YLEPWHADI EFLDL+KNHGKEE RARDLFYALW+PDLFM RV+ + +WSLF +
Sbjct: 311 AICAYLEPWHADIMEFLDLKKNHGKEEMRARDLFYALWIPDLFMRRVEKDQVWSLFSEDT 370
Query: 356 APGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKS 415
APGL+D WG EFE LY +YE+EG+ + V+A+ +W IL SQ ETGTP++L+KD CN K
Sbjct: 371 APGLSDTWGAEFESLYEQYEQEGRYLRQVKARKVWERILYSQTETGTPFLLYKDACNAKC 430
Query: 416 NQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGS 475
NQ+NLGTIKSSNLC EV++Y+ E AVCNL S+ LP +V G
Sbjct: 431 NQKNLGTIKSSNLCCEVVEYSCKDEIAVCNLGSVGLPMFVE---------------XDGQ 475
Query: 476 KNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLG 535
+F+ KL +V ++ NLN++IDV YP++ R SN RHRP+ +GVQGLAD F L
Sbjct: 476 GGXFFNLXKLHDVVRVLVRNLNRVIDVGAYPLDECRVSNTRHRPVAVGVQGLADAFFRLR 535
Query: 536 MPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPS 595
F S E+++LNK IF+TIY+ AL S+++A +EGPY T+ GSP + G+LQ DMWG P+
Sbjct: 536 YAFGSPESRRLNKAIFQTIYHAALDQSADLARQEGPYSTFRGSPAANGVLQYDMWGTEPA 595
Query: 596 ---DRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
D WDW GL+ I + G+RNSLLVA MPTASTSQILG ECFEP TSNIY+RRVLSGE
Sbjct: 596 ETRDLWDWPGLKXKIRRFGLRNSLLVALMPTASTSQILGFTECFEPITSNIYTRRVLSGE 655
Query: 653 FVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVD 712
VVN +L+ DL +GLW+ +K++II +GS+Q I IPE K +YKTVW++ QK ++D
Sbjct: 656 HQVVNSYLVDDLDHLGLWNAHMKDQIIAANGSIQDIAGIPEHTKQLYKTVWDMSQKIIID 715
Query: 713 MAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
MA DR Y+D SQS+N+ + K+TS+HF+AW +GLKTGMYYLR++AA+ AIKFT+
Sbjct: 716 MAADRAPYVDQSQSMNLFLKDCTLAKMTSMHFYAWHKGLKTGMYYLRTQAASQAIKFTLS 775
Query: 773 TSVLKEN 779
++ +E+
Sbjct: 776 PTMERES 782
>gi|363756368|ref|XP_003648400.1| hypothetical protein Ecym_8305 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891600|gb|AET41583.1| Hypothetical protein Ecym_8305 [Eremothecium cymbalariae
DBVPG#7215]
Length = 870
Score = 842 bits (2176), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/786 (52%), Positives = 554/786 (70%), Gaps = 46/786 (5%)
Query: 16 DKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYA 75
+ ++ L KL+YGL IE+ + K+ G+ +GV +L E+ AA+TT HPD++
Sbjct: 11 ETLSKSLTKLAYGLHIEYMNIDEAVHKIMVGIPEGVMERELTMYIGESLAALTTQHPDFS 70
Query: 76 SLAARIVVSNLH-KNTKKSFSETI----------------------KDMYNHYNERSGLK 112
LAARI V+ LH + F++ + + + R+
Sbjct: 71 ILAARIEVAELHGRLAGLKFTDNLSLLVASVPKEGVTGEGEDEEHPRKRQARSSNRNARM 130
Query: 113 APLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLM 172
PLI+ + Y++ MK+ ++ I RD+ + YFG+KTL +SYLLK G V E PQ + M
Sbjct: 131 KPLISKEFYEMAMKHKDIINEAIDSSRDYHFSYFGWKTLCKSYLLKKDGLVHETPQQLFM 190
Query: 173 RVAVGIHK--DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEG 230
RVA+ IH DDIDS I+TY++MS+++F HASPTLFNAGT LSSCFL+ + DDSI+G
Sbjct: 191 RVALAIHGPFDDIDSVIETYNLMSKKFFIHASPTLFNAGTVHQYLSSCFLLGIIDDSIDG 250
Query: 231 IYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGG 290
IY+TL++ A+ISK++GG+G+ V +R +G+ I G+NGTSNG+VPMLRVFN TARYVDQGG
Sbjct: 251 IYETLQKSALISKASGGLGIHVSTVRGSGALISGSNGTSNGLVPMLRVFNSTARYVDQGG 310
Query: 291 GKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSL 350
KR GAF +YLEPWH+DIF+FL +RKNHG EE RARDLFY LW+PDLFM RV+ N WSL
Sbjct: 311 NKRPGAFCIYLEPWHSDIFDFLQMRKNHGNEEMRARDLFYGLWIPDLFMRRVEENKDWSL 370
Query: 351 FCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDT 410
F P+EAPGL+DC+G EF+ LY YE+E K V+AQ +W EIL+SQ ETG P+ML+KD
Sbjct: 371 FSPDEAPGLSDCYGKEFDELYESYERELVPMKRVKAQKVWREILQSQTETGGPFMLYKDA 430
Query: 411 CNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLV 470
CN+KSNQ+NLGTI+SSNLC E+I+Y+SP ETAVCNLAS+ALP +V +
Sbjct: 431 CNQKSNQKNLGTIRSSNLCCEIIEYSSPEETAVCNLASVALPTFV------------IVS 478
Query: 471 GSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADT 530
GS+ S FD+ KL V ++T+NL+++IDV YPV A +SN ++RP+ IGVQG ADT
Sbjct: 479 GSKIS----FDYAKLHSVVKVITKNLDRVIDVCDYPVPEAEKSNKKNRPMAIGVQGFADT 534
Query: 531 FILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMW 590
++L PFDS EA +LN ++FETIY+ A+ S E+A + G YE++ GSP S+G+LQ D+W
Sbjct: 535 LMMLRFPFDSKEAARLNVNVFETIYHAAIEASVELAKKYGHYESFPGSPASQGLLQFDLW 594
Query: 591 GVNPSDR----WDWGGLRDMI-SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYS 645
G+N + DW L++ I S G+RNSLLV PMPTASTSQILG E FEP TS IY+
Sbjct: 595 GLNKENHNFLYSDWDKLKEQITSGAGLRNSLLVGPMPTASTSQILGFTESFEPMTSMIYT 654
Query: 646 RRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEI 705
RRVLSGE+ ++NK+++ D +G+W +KN+II D+GS+Q I IP+ LK +YKTVWE+
Sbjct: 655 RRVLSGEYTIINKYMVQDFCTLGIWDEKLKNRIILDNGSIQSIEGIPQHLKDLYKTVWEL 714
Query: 706 KQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAAD 765
QK LVD++ DR +ID SQSLN+ + +P GKLTS+HF++W +GLKTGMYYLR++AA+
Sbjct: 715 PQKRLVDLSRDRAPFIDQSQSLNLFLKEPTMGKLTSMHFYSWKKGLKTGMYYLRTQAASS 774
Query: 766 AIKFTV 771
AIKFT+
Sbjct: 775 AIKFTI 780
>gi|367009204|ref|XP_003679103.1| hypothetical protein TDEL_0A05600 [Torulaspora delbrueckii]
gi|359746760|emb|CCE89892.1| hypothetical protein TDEL_0A05600 [Torulaspora delbrueckii]
Length = 865
Score = 841 bits (2172), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/796 (52%), Positives = 568/796 (71%), Gaps = 46/796 (5%)
Query: 4 VKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAET 63
VK++G ++ +++T++L +LS+GL+ ++ D V +K V T +Q+ E A+T
Sbjct: 3 VKKEG---VLNVEELTSKLNELSFGLNQQYLDVGEVVRKASKAVPHSATEAQIVEYVAQT 59
Query: 64 AAAMTTNHPDYASLAARIVVSNLH----------------KNTKKSFSETIKDMYNHYNE 107
A++T+ HPDY+ LAAR+ ++ LH + ++++F++ D+ +
Sbjct: 60 LASLTSIHPDYSVLAARLEIAELHHKLRGISFTHNLEILREGSRRNFTDQKDDLRDRKRS 119
Query: 108 RSGLKAP---LIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGK-V 163
++ + P +I+ + Y++ +K+ RL+S I+ +RDF + YFG+KTL +SYL+K + V
Sbjct: 120 KT-TRVPNKSIISPEFYEMALKHEERLNSSIVVERDFHFTYFGWKTLCQSYLIKKDSEDV 178
Query: 164 VERPQHMLMRVAVGIHK--DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLV 221
E PQ + MRVA+ IH DIDS ++TY +MS+R+F HASPTLFNAGT LSSCFLV
Sbjct: 179 HETPQFLFMRVALAIHGPYSDIDSVVETYELMSKRYFIHASPTLFNAGTVNQYLSSCFLV 238
Query: 222 CMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFND 281
M +DSI+GI+ TL + A+ISK++GGIG+ V NIR+ G+ I G+NG S+G+VPMLRVFN+
Sbjct: 239 GMIEDSIDGIFKTLHKTAMISKASGGIGLHVSNIRSNGALISGSNGVSSGLVPMLRVFNN 298
Query: 282 TARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMER 341
TARYVDQGG KR GA+ +YLEPWHADI +FL LRKNHGKEE RARDLF+ALW+PDLFM R
Sbjct: 299 TARYVDQGGNKRPGAYCIYLEPWHADILDFLQLRKNHGKEEMRARDLFFALWIPDLFMRR 358
Query: 342 VQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETG 401
V+SNG W LF P+EAPGL D +G EF+ LY YE G K ++AQ LW EIL+SQIETG
Sbjct: 359 VESNGDWCLFSPDEAPGLCDVYGKEFDDLYEHYETNGLPMKRIKAQKLWSEILQSQIETG 418
Query: 402 TPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVP 461
P+ML+KD+CN+KSNQ+NLGTI+SSNLC E+I+Y+S ETAVCNLAS+ALP +V+
Sbjct: 419 GPFMLYKDSCNEKSNQKNLGTIRSSNLCCEIIEYSSKDETAVCNLASVALPSFVKH---- 474
Query: 462 MESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIG 521
V +GS FDF+KL V ++T NL+++ID+ YPVE AR SN ++RP
Sbjct: 475 --------VEGKGS---IFDFKKLHSVVKLITRNLDRLIDICDYPVEDARYSNEKNRPQA 523
Query: 522 IGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVS 581
IGVQGLAD F +L + F+S EA LN+ +FETIY+ A+ S E+A + G Y ++ GSP S
Sbjct: 524 IGVQGLADVFFILKISFESEEASTLNRQVFETIYHGAVEASVELAEKLGSYRSFEGSPAS 583
Query: 582 KGILQPDMWGVNPSDRW----DWGGLRDMISK-NGVRNSLLVAPMPTASTSQILGNNECF 636
KG+LQ D W + DW L+ ISK G+RNSLLVAPMPTASTSQILGN E F
Sbjct: 584 KGLLQFDFWEKSGEHYEYLYNDWDQLKQKISKGTGLRNSLLVAPMPTASTSQILGNTESF 643
Query: 637 EPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELK 696
EP TSN+Y+RRVLSGE++ VN++++ ++G+W+ +KNKII D+GSVQ I +P+ +K
Sbjct: 644 EPMTSNVYTRRVLSGEYINVNRYMVEHFCQLGIWNEKLKNKIIMDNGSVQNIKGLPDSIK 703
Query: 697 AIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMY 756
+YKTVWEI Q+ L+DMA R +ID SQSLN+++ P GKLT +HFHAW +GLKTGMY
Sbjct: 704 KLYKTVWEIPQRKLIDMARARSPFIDQSQSLNLYLKAPTMGKLTGMHFHAWRQGLKTGMY 763
Query: 757 YLRSRAAADAIKFTVD 772
YLR++AA+ AI+FT++
Sbjct: 764 YLRTQAASAAIQFTIN 779
>gi|50310227|ref|XP_455133.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644269|emb|CAG97840.1| KLLA0F01188p [Kluyveromyces lactis]
Length = 855
Score = 839 bits (2168), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 411/784 (52%), Positives = 551/784 (70%), Gaps = 36/784 (4%)
Query: 10 QEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTT-SQLDELAAETAAAMT 68
+E + DK+ L+ L++ L+ E+ + + +K+ G+ T S+ AET A T
Sbjct: 15 KETFNKDKLKKFLQTLTFSLNAEYIELDTLVEKILVGIPNEPTERSKFVSYVAETVAGST 74
Query: 69 TNHPDYASLAARIVVSNLHK------------NTKKSFSETIKDMYNHYNERSGLKAPLI 116
+ HPDY+ LAAR+ + LH+ +K E +D L LI
Sbjct: 75 SAHPDYSILAARVEIRELHRIIGDATFTENLAKLRKISREVTEDATKRRKITRDLSKNLI 134
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVV-ERPQHMLMRVA 175
+D+ Y +K ++D I RD+++ YFG+KTL +SYL+K + E PQ M MRVA
Sbjct: 135 SDEFYQYALKFKDKIDQAIDKSRDYNFTYFGWKTLCKSYLMKRNNEQTHETPQFMFMRVA 194
Query: 176 VGIHK--DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYD 233
+ IH DDIDS ++T+ +MSQ++F HASPTL N+GT LSSCFLV M+DDSI+GIY
Sbjct: 195 LAIHGPFDDIDSVLETFELMSQKYFIHASPTLCNSGTVNQYLSSCFLVGMEDDSIDGIYK 254
Query: 234 TLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKR 293
TL + A+ISK++GG+G+ V NIRA G+YI G+NGTSNG+VPMLRVFN+TARYVDQGG KR
Sbjct: 255 TLHKTALISKASGGVGIHVSNIRANGAYISGSNGTSNGLVPMLRVFNNTARYVDQGGNKR 314
Query: 294 KGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCP 353
GAF +YLEPWHADI +FL LRKNHGKEE RARDLFYALW+PDLFM+RV++N WS+F P
Sbjct: 315 PGAFCIYLEPWHADIIDFLQLRKNHGKEEMRARDLFYALWIPDLFMKRVENNEDWSIFSP 374
Query: 354 NEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNK 413
+EAPGL DC+G EF++LY +YEKE +K ++AQ +W EIL+SQ ETG P+ML+KD CNK
Sbjct: 375 DEAPGLTDCYGDEFDKLYERYEKELIPRKKMKAQQIWSEILQSQTETGVPFMLYKDACNK 434
Query: 414 KSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSR 473
KSNQ+NLG IKSSNLC E+++Y+SP E AVCNLAS+ALP YV + S
Sbjct: 435 KSNQKNLGVIKSSNLCCEIVEYSSPEEVAVCNLASVALPTYVN-------------LSSD 481
Query: 474 GSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFIL 533
G FDF KL V ++ +NL++ IDV YPV AR N+R+RP+ IGVQGLADTF+L
Sbjct: 482 GPP--VFDFVKLHHVVKVLVKNLDRTIDVGKYPVPEARNGNIRNRPLAIGVQGLADTFML 539
Query: 534 LGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVN 593
PF+S +A LNK IFETIY+ A+ S+E+A G YE++ GSP S+G LQ D+W +N
Sbjct: 540 CRTPFESVDAATLNKQIFETIYHAAIEASTELAELFGHYESFPGSPASEGQLQFDLWSLN 599
Query: 594 PSDRW----DWGGLRDMISK-NGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRV 648
+ DW L+ I+K G+RNSLLV PMPTASTSQILG E FEP TSNIYSRRV
Sbjct: 600 KDNYKFLFDDWDSLKSRITKGKGLRNSLLVGPMPTASTSQILGFTESFEPMTSNIYSRRV 659
Query: 649 LSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQK 708
LSGEF ++N++++ D ++G+W+ +KN+I+ D+GS+Q I IPEE+K +YKTVWE Q+
Sbjct: 660 LSGEFTIINQYMVDDFCQLGIWNEKLKNRILRDNGSIQTIEGIPEEVKNLYKTVWETSQR 719
Query: 709 TLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIK 768
++D++ DR +ID SQSLN+++ +P GKLT++HF+ W +GLKTGMYYLR++AA+ AI+
Sbjct: 720 KMIDLSSDRAPFIDQSQSLNLYLREPTMGKLTAMHFYTWKKGLKTGMYYLRTQAASRAIQ 779
Query: 769 FTVD 772
FT++
Sbjct: 780 FTLN 783
>gi|380863076|gb|AFF18831.1| ribonucleotide reductase large subunit A, partial [Dimocarpus
longan]
Length = 421
Score = 837 bits (2161), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/421 (91%), Positives = 405/421 (96%)
Query: 316 KNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYE 375
KNHGKEEHRARDLFYALWVPDLFMERVQSNG+WSLFCPNEAPGLADCWG EFERLYT YE
Sbjct: 1 KNHGKEEHRARDLFYALWVPDLFMERVQSNGVWSLFCPNEAPGLADCWGAEFERLYTHYE 60
Query: 376 KEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQY 435
+EGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCN+KSNQQNLGTIKSSNLCTE+I+Y
Sbjct: 61 REGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNRKSNQQNLGTIKSSNLCTEIIEY 120
Query: 436 TSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTEN 495
TSPTETAVCNLASIALPRYVRE G+PMESHPSKLVGSRGSKNRYFDFEKLAEVT IVTEN
Sbjct: 121 TSPTETAVCNLASIALPRYVREKGIPMESHPSKLVGSRGSKNRYFDFEKLAEVTAIVTEN 180
Query: 496 LNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIY 555
LNKIIDVNYYPVE A+RSN+RHRPIGIGVQGLADTFILLGM FDS EAQQLNKDIFETIY
Sbjct: 181 LNKIIDVNYYPVENAKRSNMRHRPIGIGVQGLADTFILLGMAFDSPEAQQLNKDIFETIY 240
Query: 556 YHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNS 615
YHAL+ S+E+AA+EG YETY GSPVSKGILQPDMWG PS+RWDWG LRDMI+KNGVRNS
Sbjct: 241 YHALKASAEMAAKEGSYETYEGSPVSKGILQPDMWGATPSNRWDWGALRDMITKNGVRNS 300
Query: 616 LLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIK 675
LLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSP +K
Sbjct: 301 LLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPAVK 360
Query: 676 NKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPN 735
NKIIY+DGSVQKIP++PEELK IYKTVWEIKQKTLVDMAVDRGCYID SQSLNIHMDQPN
Sbjct: 361 NKIIYNDGSVQKIPEVPEELKGIYKTVWEIKQKTLVDMAVDRGCYIDQSQSLNIHMDQPN 420
Query: 736 F 736
F
Sbjct: 421 F 421
>gi|429965375|gb|ELA47372.1| ribonucleoside-diphosphate reductase, alpha subunit [Vavraia
culicis 'floridensis']
Length = 773
Score = 834 bits (2155), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 403/809 (49%), Positives = 557/809 (68%), Gaps = 37/809 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V D E + KI L + S+GL+I + + K+ +G+ ++T + LA
Sbjct: 1 MFVRNSDKILEPLDTKKIHKMLLECSHGLNIMREELDDLFNKIESGLCDNLSTCDIVSLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA+ T +PD+ +AARIVV HK T +F E +K Y + + +
Sbjct: 61 AECAASAMTKNPDFGCIAARIVVREHHKVTLDTFYEKVKYCYE--------QKRYFSREF 112
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+ + +N + ++I Y RD+D +FGFKT+E+SY+L + + VERPQ + MRVA+GIH
Sbjct: 113 CERVRENKDAIQAQIDYSRDYDISFFGFKTMEKSYMLSINSRTVERPQDLFMRVALGIHY 172
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D + A +TYH+MSQ++F HA+PT+FNAGT QLSSCFL+ +++DSIEGI+ + + A
Sbjct: 173 DSLQDAFETYHLMSQKYFVHATPTMFNAGTLTPQLSSCFLLGIEEDSIEGIFKAVSDAAK 232
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGG+G++VH +R S I+ T G + GI+P+ ++F T R +DQGG KR G+ A+Y
Sbjct: 233 ISKTAGGLGMNVHKLRGANSLIKSTGGRACGIIPVAKIFEATLRCIDQGGKKRPGSMAIY 292
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWH+DIFEFLD+RKN GKEE RARD+F ALW+PDLFM RV ++ WSLF ++ P L
Sbjct: 293 VEPWHSDIFEFLDIRKNTGKEELRARDIFTALWIPDLFMRRVHNDENWSLFSNDDVPNLY 352
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ +G EF++ Y YEK G A++ V+AQ LW IL SQIETGTPYM +KD+ N+ +NQ++L
Sbjct: 353 NLYGDEFDKAYEMYEKNGMARRTVRAQKLWKAILSSQIETGTPYMCYKDSANRMNNQKHL 412
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLC+E+++YT E AVCNLAS+ LPR++ ++ F
Sbjct: 413 GTIKCSNLCSEIMEYTEENEIAVCNLASLGLPRFM--------------------QDGQF 452
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D+EKL VT IV +NLNK+IDVN YP+ R SNL+HRPIG+GVQGLAD F++L MP+DS
Sbjct: 453 DYEKLKMVTKIVVKNLNKVIDVNLYPLPETRNSNLKHRPIGLGVQGLADVFVMLRMPYDS 512
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+ +N IFETI++ AL S E+A GPY++Y GSP+S+G+L DMW V P DW
Sbjct: 513 KEARAVNLRIFETIHFAALDASCELAKEYGPYDSYEGSPMSQGVLHFDMWNVVPVTNHDW 572
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
GLR I+K GVRNSLLVA MPTASTSQILG NECFEP+T+NIY+RR L+GEF VVN +L
Sbjct: 573 RGLRARIAKYGVRNSLLVALMPTASTSQILGYNECFEPFTTNIYTRRTLAGEFQVVNTYL 632
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
+HDL ++ LWS +KN +I ++GS+Q+I IP+E+K +YKT WE+K ++L+D+A DR Y
Sbjct: 633 MHDLMKLNLWSDEMKNILIQEEGSIQRIEGIPDEIKRLYKTAWELKMRSLIDLAADRAPY 692
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
+D SQSLNI M QP + KLTS+HF+ + RGLKTGMYYLR+R + A+KFTVD ++
Sbjct: 693 VDQSQSLNIFMAQPTYPKLTSMHFYGFKRGLKTGMYYLRTRPISAAVKFTVDRGMVSTT- 751
Query: 781 KVTDDDDAKMAQMVCSLTNR-EECMACGS 808
+ + CS T+ +ECM+C +
Sbjct: 752 -------KLLQKSSCSPTSEDDECMSCSA 773
>gi|429966492|gb|ELA48489.1| ribonucleoside-diphosphate reductase, alpha subunit [Vavraia
culicis 'floridensis']
Length = 773
Score = 834 bits (2154), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 402/809 (49%), Positives = 557/809 (68%), Gaps = 37/809 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V D E + KI L + S+GL+I + + K+ +G+ ++T + LA
Sbjct: 1 MFVRNSDKILEPLDTKKIHKMLLECSHGLNIMREELDDLFNKIESGLCDNLSTCDIVSLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA+ T +PD+ +AARIVV H+ T +F E +K Y + + +
Sbjct: 61 AECAASAMTKNPDFGCIAARIVVREHHRVTLDTFYEKVKYCYE--------QKRYFSREF 112
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+ + +N + ++I Y RD+D +FGFKT+E+SY+L + + VERPQ + MRVA+GIH
Sbjct: 113 CERVRENKDAIQAQIDYSRDYDISFFGFKTMEKSYMLSINSRTVERPQDLFMRVALGIHY 172
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D + A +TYH+MSQ++F HA+PT+FNAGT QLSSCFL+ +++DSIEGI+ + + A
Sbjct: 173 DSLQDAFETYHLMSQKYFVHATPTMFNAGTLTPQLSSCFLLGIEEDSIEGIFKAVSDAAK 232
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGG+G++VH +R S I+ T G + GI+P+ ++F T R +DQGG KR G+ A+Y
Sbjct: 233 ISKTAGGLGMNVHKLRGANSLIKSTGGRACGIIPVAKIFEATLRCIDQGGKKRPGSMAIY 292
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWH+DIFEFLD+RKN GKEE RARD+F ALW+PDLFM RV ++ WSLF ++ P L
Sbjct: 293 VEPWHSDIFEFLDIRKNTGKEELRARDIFTALWIPDLFMRRVHNDENWSLFSNDDVPNLY 352
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ +G EF++ Y YEK G A++ V+AQ LW IL SQIETGTPYM +KD+ N+ +NQ++L
Sbjct: 353 NLYGDEFDKAYEMYEKNGMARRTVRAQKLWKAILSSQIETGTPYMCYKDSANRMNNQKHL 412
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLC+E+++YT E AVCNLAS+ LPR++ ++ F
Sbjct: 413 GTIKCSNLCSEIMEYTEENEIAVCNLASLGLPRFM--------------------QDGQF 452
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D+EKL VT IV +NLNK+IDVN YP+ R SNL+HRPIG+GVQGLAD F++L MP+DS
Sbjct: 453 DYEKLKMVTKIVVKNLNKVIDVNLYPLPETRNSNLKHRPIGLGVQGLADVFVMLRMPYDS 512
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA+ +N IFETI++ AL S E+A GPY++Y GSP+S+G+L DMW V P DW
Sbjct: 513 KEARAVNLRIFETIHFAALDASCELAKEYGPYDSYEGSPMSQGVLHFDMWNVVPVTNHDW 572
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
GLR I+K GVRNSLLVA MPTASTSQILG NECFEP+T+NIY+RR L+GEF VVN +L
Sbjct: 573 RGLRARIAKYGVRNSLLVALMPTASTSQILGYNECFEPFTTNIYTRRTLAGEFQVVNTYL 632
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
+HDL ++ LWS +KN +I ++GS+Q+I IP+E+K +YKT WE+K ++L+D+A DR Y
Sbjct: 633 MHDLMKLNLWSDEMKNILIQEEGSIQRIEGIPDEIKRLYKTAWELKMRSLIDLAADRAPY 692
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
+D SQSLNI M QP + KLTS+HF+ + RGLKTGMYYLR+R + A+KFTVD ++
Sbjct: 693 VDQSQSLNIFMAQPTYPKLTSMHFYGFKRGLKTGMYYLRTRPISAAVKFTVDRGMVSTT- 751
Query: 781 KVTDDDDAKMAQMVCSLTNR-EECMACGS 808
+ + CS T+ +ECM+C +
Sbjct: 752 -------KLLQKSSCSPTSEDDECMSCSA 773
>gi|374106763|gb|AEY95672.1| FACR155Wp [Ashbya gossypii FDAG1]
Length = 864
Score = 833 bits (2152), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/791 (52%), Positives = 548/791 (69%), Gaps = 36/791 (4%)
Query: 1 MYVVKRD-GKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDEL 59
++++ D G EA K+ L+KL +GL I D +++ G+ + S+L
Sbjct: 7 IFIISDDSGLTEAFDERKLLESLRKLQFGLKINDADIDKAVKRIAAGIGGDIRDSELVAY 66
Query: 60 AAETAAAMTTNHPDYASLAARIVVSNLHK--------NTKKSFSETIKDMYNHYNERSGL 111
ET A+M T HPD++ LAAR+ + LHK E+ H +R
Sbjct: 67 IGETLASMITRHPDFSLLAARVEIKVLHKRLLGLGFTGNLAVLCESGDSPEGHAAKRKRA 126
Query: 112 KAPL----IADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERP 167
+P + ++YD+ +++ +D I DF + YFG+KTL +SYLLK QG+V E P
Sbjct: 127 MSPCTRGPVRRELYDLAVQHRNIIDQAIDDTLDFTFTYFGWKTLCKSYLLKHQGRVHETP 186
Query: 168 QHMLMRVAVGIH--KDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKD 225
Q+M MRVA+ +H DID ++TY +M+ ++F HASPTLFNAGT LSSCFL+ + +
Sbjct: 187 QYMFMRVALALHGPSGDIDRVLETYRLMANKYFIHASPTLFNAGTTSQFLSSCFLLGIHE 246
Query: 226 DSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARY 285
DSI+GIY+ L + A+ISK++GGIG+ V +IRA GSYI GTNGTSNG+VPML VFN TARY
Sbjct: 247 DSIDGIYNALHKAALISKASGGIGIHVSDIRANGSYISGTNGTSNGLVPMLSVFNSTARY 306
Query: 286 VDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSN 345
VDQGG KR GAF +YLEPWHAD+F+FL LR+NHGKEE RARDLFY LW+PDLFM+RV++N
Sbjct: 307 VDQGGNKRPGAFCIYLEPWHADVFDFLRLRRNHGKEEMRARDLFYGLWIPDLFMKRVENN 366
Query: 346 GLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYM 405
G WSLF PNEA GL+DC+G FE+LY +YE+E + + V+AQ LW EIL SQ ETG P+M
Sbjct: 367 GEWSLFSPNEAVGLSDCYGEAFEQLYVRYERELEPYRRVKAQELWREILLSQTETGGPFM 426
Query: 406 LFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESH 465
L+KD CN KSNQ+NLGTIKSSNLC E+++Y+S E AVCNLAS+ALP +V
Sbjct: 427 LYKDACNSKSNQKNLGTIKSSNLCCEIVEYSSRDEVAVCNLASVALPTFV---------- 476
Query: 466 PSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQ 525
S S FD+ +L V ++T NL+K ID+ YPV A RSN +HRP+ +GVQ
Sbjct: 477 ------SVTSDAITFDYARLHSVVKVMTRNLDKAIDIGDYPVPEAERSNKKHRPLALGVQ 530
Query: 526 GLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGIL 585
GLAD F+L+ PF+ EA Q+N++IFETIY+ A+ TS E+AA G Y ++ GSP SKG L
Sbjct: 531 GLADVFMLMRFPFNGEEAAQMNREIFETIYHAAVETSIELAAEYGAYASFVGSPASKGEL 590
Query: 586 QPDMWGVNPSDRW----DWGGLRDMI-SKNGVRNSLLVAPMPTASTSQILGNNECFEPYT 640
Q D+WG N + DW L++ I S G+RNSLLV PMPTASTSQILG E FEP T
Sbjct: 591 QFDLWGRNKDNYQFLYDDWDELKEKIKSGPGLRNSLLVGPMPTASTSQILGFTESFEPMT 650
Query: 641 SNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYK 700
S IY+RRVLSGE+ +VNK+++ D ++G+WS +KN+II D GS+Q I IP +LK +YK
Sbjct: 651 SMIYTRRVLSGEYTLVNKYMVQDFCDLGIWSEELKNRIIKDGGSIQGIDGIPPDLKDLYK 710
Query: 701 TVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRS 760
TVWE+ Q+ L+D++ DR ++D SQSLN+ + +P GKLTS+HF+AW +GLKTGMYYLR+
Sbjct: 711 TVWELPQRKLIDLSADRAPFVDQSQSLNLFLKEPTMGKLTSMHFYAWKKGLKTGMYYLRT 770
Query: 761 RAAADAIKFTV 771
+AAA+AI+FT+
Sbjct: 771 QAAANAIQFTL 781
>gi|45185841|ref|NP_983557.1| ACR155Wp [Ashbya gossypii ATCC 10895]
gi|44981631|gb|AAS51381.1| ACR155Wp [Ashbya gossypii ATCC 10895]
Length = 864
Score = 833 bits (2151), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 412/791 (52%), Positives = 548/791 (69%), Gaps = 36/791 (4%)
Query: 1 MYVVKRD-GKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDEL 59
++++ D G EA K+ L+KL +GL I D +++ G+ + S+L
Sbjct: 7 IFIISDDSGLTEAFDERKLLESLRKLQFGLKINDADIDKAVKRIAAGIGGDIRDSELVAY 66
Query: 60 AAETAAAMTTNHPDYASLAARIVVSNLHK--------NTKKSFSETIKDMYNHYNERSGL 111
ET A+M T HPD++ LAAR+ + LHK E+ H +R
Sbjct: 67 IGETLASMITRHPDFSLLAARVEIKVLHKRLLGLGFTGNLAVLCESGDSPEGHATKRKRA 126
Query: 112 KAPL----IADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERP 167
+P + ++YD+ +++ +D I DF + YFG+KTL +SYLLK QG+V E P
Sbjct: 127 MSPCTRGPVRRELYDLAVQHRNIIDQAIDDTLDFTFTYFGWKTLCKSYLLKHQGRVHETP 186
Query: 168 QHMLMRVAVGIH--KDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKD 225
Q+M MRVA+ +H DID ++TY +M+ ++F HASPTLFNAGT LSSCFL+ + +
Sbjct: 187 QYMFMRVALALHGPSGDIDRVLETYRLMANKYFIHASPTLFNAGTTSQFLSSCFLLGIHE 246
Query: 226 DSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARY 285
DSI+GIY+ L + A+ISK++GGIG+ V +IRA GSYI GTNGTSNG+VPML VFN TARY
Sbjct: 247 DSIDGIYNALHKAALISKASGGIGIHVSDIRANGSYISGTNGTSNGLVPMLSVFNSTARY 306
Query: 286 VDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSN 345
VDQGG KR GAF +YLEPWHAD+F+FL LR+NHGKEE RARDLFY LW+PDLFM+RV++N
Sbjct: 307 VDQGGNKRPGAFCIYLEPWHADVFDFLRLRRNHGKEEMRARDLFYGLWIPDLFMKRVENN 366
Query: 346 GLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYM 405
G WSLF PNEA GL+DC+G FE+LY +YE+E + + V+AQ LW EIL SQ ETG P+M
Sbjct: 367 GEWSLFSPNEAVGLSDCYGEAFEQLYVRYERELEPYRRVKAQELWREILLSQTETGGPFM 426
Query: 406 LFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESH 465
L+KD CN KSNQ+NLGTIKSSNLC E+++Y+S E AVCNLAS+ALP +V
Sbjct: 427 LYKDACNSKSNQKNLGTIKSSNLCCEIVEYSSRDEVAVCNLASVALPTFV---------- 476
Query: 466 PSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQ 525
S S FD+ +L V ++T NL+K ID+ YPV A RSN +HRP+ +GVQ
Sbjct: 477 ------SVTSDAITFDYARLHSVVKVMTRNLDKAIDIGDYPVPEAERSNKKHRPLALGVQ 530
Query: 526 GLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGIL 585
GLAD F+L+ PF+ EA Q+N++IFETIY+ A+ TS E+AA G Y ++ GSP SKG L
Sbjct: 531 GLADVFMLMRFPFNGEEAAQMNREIFETIYHAAVETSIELAAEYGVYASFVGSPASKGEL 590
Query: 586 QPDMWGVNPSDRW----DWGGLRDMI-SKNGVRNSLLVAPMPTASTSQILGNNECFEPYT 640
Q D+WG N + DW L++ I S G+RNSLLV PMPTASTSQILG E FEP T
Sbjct: 591 QFDLWGRNKDNYQFLYDDWDELKEKIKSGPGLRNSLLVGPMPTASTSQILGFTESFEPMT 650
Query: 641 SNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYK 700
S IY+RRVLSGE+ +VNK+++ D ++G+WS +KN+II D GS+Q I IP +LK +YK
Sbjct: 651 SMIYTRRVLSGEYTLVNKYMVQDFCDLGIWSEELKNRIIKDGGSIQGIDGIPPDLKDLYK 710
Query: 701 TVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRS 760
TVWE+ Q+ L+D++ DR ++D SQSLN+ + +P GKLTS+HF+AW +GLKTGMYYLR+
Sbjct: 711 TVWELPQRKLIDLSADRAPFVDQSQSLNLFLKEPTMGKLTSMHFYAWKKGLKTGMYYLRT 770
Query: 761 RAAADAIKFTV 771
+AAA+AI+FT+
Sbjct: 771 QAAANAIQFTL 781
>gi|307169039|gb|EFN61884.1| Ribonucleoside-diphosphate reductase large subunit [Camponotus
floridanus]
Length = 744
Score = 830 bits (2144), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/755 (53%), Positives = 530/755 (70%), Gaps = 22/755 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG++E VHFD+ITAR+K L Y L + + DP +++ +V T +Y GVTT +LD LA
Sbjct: 1 MHVLKRDGRKEPVHFDEITARIKTLCYDLDMNYVDPSIIALRVITDLYSGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
+E AA+M HPDYA LAARI +SNLHK TKK+FSE I D+Y+ N + + P+I++
Sbjct: 61 SEIAASMINQHPDYAILAARIAISNLHKETKKTFSEVIADLYDAKNSITNKRLPIISEKY 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y II NA +L+S IIYDRDF+Y Y +K LE ++LLK+ GKVVERPQHMLMRVA+ IH
Sbjct: 121 YKIIQSNADKLNSAIIYDRDFNYSYTTYKMLETNHLLKLNGKVVERPQHMLMRVAIAIHD 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDID AI+TY+ +S+++F + + TL A T Q++S FL+ M DSI+GI DTL+ A+
Sbjct: 181 DDIDKAIETYNFLSKQYFIYPAQTLDTACTVTQQMASSFLLTMSGDSIDGILDTLERSAV 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
+ G IG +VH IRA + IRGT G SNG+VPML+ +N + V + K VY
Sbjct: 241 LCHYNGDIGFNVHCIRAKNTPIRGTGGVSNGLVPMLKAYNTSIATVSR---KNTEQVTVY 297
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIFEFLDL+KN G+E+ RA+D+FYALW PDLFM+R+ ++ +WSL CP+E P L
Sbjct: 298 LEPWHADIFEFLDLKKNIGEEKLRAKDMFYALWTPDLFMQRIFNDDVWSLMCPHECPDLI 357
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ +G EFE LYT+YEKEG+ +K ++A++LW I+++Q ETGTPY+++KD CN+K+N QNL
Sbjct: 358 EAYGEEFELLYTRYEKEGRFRKQIKARDLWLLIIQTQFETGTPYIVYKDHCNRKTNHQNL 417
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK S TE+IQY+S E A+CN ASIA+ +V P K + F
Sbjct: 418 GTIKCSGFSTEIIQYSSSDEIAMCNTASIAVNMFV---------DPIK---------KTF 459
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL E+ IVT NL+K+ID N+YP+ + S +HR IGIGVQGLAD FIL+ PF+S
Sbjct: 460 DFNKLKEIVKIVTYNLDKMIDANFYPLPEIKLSCEKHRSIGIGVQGLADAFILMRYPFES 519
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA++LN IFET+YY AL S EIA ++G Y +Y GSP+SKG+LQ DMW P+D WDW
Sbjct: 520 QEARKLNIQIFETLYYGALEASCEIAIKKGSYVSYKGSPISKGMLQYDMWNAKPTDLWDW 579
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I ++GVRNSLL+A M A +Q+L NN EPYTSNIY LS +F +V L
Sbjct: 580 NTLKKKIEEHGVRNSLLIAQMSDAFMAQMLENNVSVEPYTSNIYVIHALSKQFRIVKPRL 639
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL E LW I NKII +DGS+Q I IP ELK +YKT WE+ QKT+ DMA RG +
Sbjct: 640 LRDLIEKKLWDENICNKIINNDGSIQNIEDIPNELKLLYKTAWEMPQKTIFDMAACRGPF 699
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGM 755
ID SQ LN+HM P KLTS+HF+AW GLK+ +
Sbjct: 700 IDQSQCLNVHMIDP-LEKLTSMHFYAWENGLKSSI 733
>gi|260945435|ref|XP_002617015.1| hypothetical protein CLUG_02459 [Clavispora lusitaniae ATCC 42720]
gi|238848869|gb|EEQ38333.1| hypothetical protein CLUG_02459 [Clavispora lusitaniae ATCC 42720]
Length = 878
Score = 830 bits (2144), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/763 (52%), Positives = 538/763 (70%), Gaps = 22/763 (2%)
Query: 17 KITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYAS 76
++ L +L+ L I + L + + + +T +QL EL AET A +PD+A
Sbjct: 18 RLRKTLDELNRELDISSSELELSMKAIENSLPASLTVNQLLELVAETLAQRVVQNPDFAL 77
Query: 77 LAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPL--IADDVYDIIMKNAARLDSE 134
LA R+ + + FS + N S +K L ++ D + + +N+ LD
Sbjct: 78 LAGRVEAYRVQRLVVSPFSTNFSRLENGSKTESKIKMDLGLVSKDAAEFVARNSDYLDKL 137
Query: 135 IIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIH-----KDDIDSAIKT 189
+ +RD ++ YFG +TL +SY L++ V E PQ++ +RVA+G+H K+ + +
Sbjct: 138 VRPERDMNFTYFGMRTLCKSYFLQIDNVVAETPQYLFLRVAIGLHGKLDDKNALQRVSEI 197
Query: 190 YHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIG 249
Y +MS+++ +SPTLF+AGT LSSCFL+ +K+DSI+GI+ TL A+ISK +GG+G
Sbjct: 198 YDLMSEKYLIFSSPTLFSAGTNNNFLSSCFLMGIKEDSIDGIFKTLHSAALISKGSGGLG 257
Query: 250 VSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIF 309
+ VHNIR+ GS I +NGTSNG+VPML+VFN+TARYVDQGG KR GAFA+Y+EPWH DI
Sbjct: 258 IHVHNIRSNGSAISSSNGTSNGLVPMLKVFNNTARYVDQGGNKRPGAFAIYIEPWHGDIM 317
Query: 310 EFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFER 369
E L+LRKNHG +E RARDLF+ALW+PDLFM+RV++NG WSLF P++APGL+D +G EFE
Sbjct: 318 EVLELRKNHGPDELRARDLFFALWIPDLFMKRVKNNGKWSLFSPSKAPGLSDVYGEEFES 377
Query: 370 LYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLC 429
LY KYE+E A ++A+ LW IL++Q ETG P+ML+KD CN+KSNQ NLGTIKSSNLC
Sbjct: 378 LYQKYEEEDLACTTIEARKLWMHILQAQTETGMPFMLYKDACNRKSNQMNLGTIKSSNLC 437
Query: 430 TEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVT 489
E+++Y+SP ETAVCNLAS+ LP +V + + N FDF+KL +VT
Sbjct: 438 CEIVEYSSPEETAVCNLASLGLPTFVT---------------ANENGNVAFDFKKLHKVT 482
Query: 490 GIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKD 549
I+ +L+++IDV YP+++A+ SNL+HRPI IGVQGLADTF+ L +PFDS EA LN
Sbjct: 483 KILARSLDRVIDVTKYPIKSAKVSNLKHRPIAIGVQGLADTFLELRLPFDSAEAATLNSQ 542
Query: 550 IFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISK 609
IFETIY+ A+ +S E++ +G YE++ GSP SKG LQ D+W P DW L++ + K
Sbjct: 543 IFETIYHAAIESSMELSKEKGYYESFEGSPASKGKLQFDLWNYKPDFFDDWDELKEQVKK 602
Query: 610 NGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGL 669
G+RNSLLVA MPTASTSQILG NECFEP+TSNIY+RRVLSGEF VVNK+L+ DL +G+
Sbjct: 603 YGLRNSLLVAAMPTASTSQILGFNECFEPFTSNIYNRRVLSGEFQVVNKYLVKDLRALGI 662
Query: 670 WSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNI 729
W+ +K+ II ++GSVQ I IP++LK +YKTVWEI QK +V +A +RG +ID SQS+NI
Sbjct: 663 WNKAVKDMIIMNNGSVQNIDIIPQKLKKLYKTVWEISQKHIVRLAAERGRFIDQSQSMNI 722
Query: 730 HMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
H+ P FG LTS HF AW +GLKTGMYYLR++AAA AI+FTVD
Sbjct: 723 HLMNPTFGTLTSCHFFAWEQGLKTGMYYLRTQAAARAIQFTVD 765
>gi|396082286|gb|AFN83896.1| ribonucleoside diphosphate reductase [Encephalitozoon romaleae
SJ-2008]
Length = 769
Score = 830 bits (2143), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/800 (49%), Positives = 557/800 (69%), Gaps = 42/800 (5%)
Query: 9 KQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMT 68
K E V D + ++++ + L+++H + + K+ +G +G+T ++ + +ETAA+M
Sbjct: 12 KSEKVGIDGVRGQIEEYAKTLNLKHVNVSELMDKIISGWCEGMTKKEVVDYCSETAASMI 71
Query: 69 TNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNA 128
T HP+Y +++RI+VS +H+ T SFSE IK + H I++++Y II+++
Sbjct: 72 TKHPEYGRISSRIIVSYIHEVTMNSFSEKIKYIQEHRG--------TISEEMYGIILEHK 123
Query: 129 ARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAIK 188
+D+ I Y+ D+ ++YFG TL +SY+++V ++VERPQ + MR A+ IHK + +
Sbjct: 124 ETIDAMINYENDYLFNYFGMLTLMKSYMIRVGDEIVERPQDVFMRTALQIHKTNFKRVKE 183
Query: 189 TYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGI 248
TY M+S+ +FTHA+PTL+N+ QL+SCFL+ K+DSIEG+Y T+ + AII+K +GGI
Sbjct: 184 TYDMLSRHYFTHATPTLYNSCLKNPQLASCFLITPKEDSIEGVYHTINQTAIITKFSGGI 243
Query: 249 GVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADI 308
G+++H+IRA GS ++ T G SNGI+P+++VFN T RY++QG +R G+ A+YLEPWH +I
Sbjct: 244 GLNLHSIRAKGSALKNTGGKSNGIIPLIQVFNATKRYINQGAERRPGSIAIYLEPWHMEI 303
Query: 309 FEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFE 368
F+FLD+RK+ G EE RARD+F ALWV DLFMERV+++ WSLFCP++A GL D WG EF
Sbjct: 304 FDFLDIRKSTGPEEFRARDIFIALWVNDLFMERVKNDEEWSLFCPSQAVGLEDMWGEEFN 363
Query: 369 RLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNL 428
LY KYEK ++ VV AQ LW I+++QIETGTPYM +KD CN+ SNQQ+LG IKSSNL
Sbjct: 364 ELYCKYEKT-ISRTVVPAQKLWKAIIEAQIETGTPYMCYKDACNRLSNQQHLGIIKSSNL 422
Query: 429 CTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEV 488
CTE+++Y+S E +VCNLASI+LP +V KN FDFE V
Sbjct: 423 CTEIVEYSSGDEVSVCNLASISLPMFV--------------------KNGMFDFESFRNV 462
Query: 489 TGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNK 548
I+T NLNK+ID +YYPVE A+ SN++HRPIGIGVQGLAD F +L +PF+S EA+ LNK
Sbjct: 463 VRIITINLNKVIDSSYYPVEEAKTSNMKHRPIGIGVQGLADLFAILKLPFESDEARSLNK 522
Query: 549 DIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMIS 608
+IFE +YY AL S E+A EGP+ +Y GSP+SKGI ++ G S++WDW GLR+ I
Sbjct: 523 EIFEAMYYFALEASCELAESEGPFPSYKGSPISKGIFHFELAGKKASNKWDWEGLRERIK 582
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMG 668
K+G RNSLL+A MPTA TSQI GNNE FEPY SNIY+RR +GEF +VN++L+ DL ++G
Sbjct: 583 KHGTRNSLLIALMPTAGTSQIFGNNEAFEPYASNIYTRRTHAGEFQIVNQYLIDDLVKLG 642
Query: 669 LWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLN 728
LWS +KN II ++GS+Q I IP +++ IYKT WEIK ++++D+A DR +ID SQSLN
Sbjct: 643 LWSYEMKNLIIENEGSIQNIISIPPKIREIYKTAWEIKMRSVIDLAADRQAFIDQSQSLN 702
Query: 729 IHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDA 788
I + +P + +LTS+HF+ + GLKTGMYYLR+R AIKFTVD K+ + +
Sbjct: 703 IFIAKPTYSQLTSMHFYGYHCGLKTGMYYLRTRPITSAIKFTVDK-------KLAEKTLS 755
Query: 789 KMAQMVCSLTNREECMACGS 808
M +M E C C S
Sbjct: 756 SMNEM------DEPCSMCSS 769
>gi|22671562|gb|AAN04389.1|AF451898_94 Rr1 [Heliothis zea virus 1]
Length = 939
Score = 829 bits (2141), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/778 (51%), Positives = 546/778 (70%), Gaps = 38/778 (4%)
Query: 3 VVKRDGKQEAVHFDKITARLKKL----SYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDE 58
+VKR+G E K+ AR+++ L+ + + V G+Y V+T +LD
Sbjct: 8 IVKRNGSVERFDPSKLYARIERCMTMSEPRLTTAFINIAGIVADVEKGLYDRVSTLELDT 67
Query: 59 LAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIAD 118
L +ET A+M+T HPD++ LAARI + LHK T+ FSETI+D+Y +A ++
Sbjct: 68 LLSETCASMSTAHPDHSILAARIAMQALHKRTRSKFSETIRDLY---------EANIVPQ 118
Query: 119 DVYDIIMKNAARLDSEIIYDRDFD-YDYFGFKTLERSYLLKV-QGKVVERPQHMLMRVAV 176
+D++ ++A LDS I+ DRDF YF +KTLER+YL+K+ GK+ ER QHM MR A+
Sbjct: 119 YYFDLVQEHADTLDSAIVDDRDFQSLTYFAYKTLERTYLIKLADGKICERVQHMYMRTAL 178
Query: 177 GIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLK 236
GIH DI+S I+TY+++S R++ H++PTL +A T R+ +SC+L+ +K+DSI G+ DTLK
Sbjct: 179 GIHGRDIESVIETYNLLSNRYYVHSTPTLCHAATNRSNYASCYLLELKEDSIGGVMDTLK 238
Query: 237 ECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGA 296
+ A ISK GG+G+ VH +R S I TNG ++G+VPMLR++N +RYV QGG KR GA
Sbjct: 239 DAATISKHCGGVGLHVHKLRCKNSTIHSTNGNASGLVPMLRMYNAMSRYVTQGGNKRPGA 298
Query: 297 FAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEA 356
AVYLEPWHAD+F+F+++RKN G EE RARDLFYALWVPDLFM+RV G WSL CP+ +
Sbjct: 299 IAVYLEPWHADVFDFIEMRKNSGFEEARARDLFYALWVPDLFMKRVNDGGYWSLMCPDSS 358
Query: 357 PGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSN 416
PGL+DCWG EFE YT YE+EG+ + V A+ LW I+ +Q+ETGTPY+L+KDT N+ SN
Sbjct: 359 PGLSDCWGEEFEAKYTAYEQEGRYVRRVDARELWKAIVTAQVETGTPYILYKDTVNRNSN 418
Query: 417 QQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSK 476
Q++LGTIK SNLCTE+++Y SP ETAVC LAS+ LP++V +
Sbjct: 419 QRHLGTIKGSNLCTEIVEYASPDETAVCVLASVNLPKFV--------------------E 458
Query: 477 NRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGM 536
+ F+ LA+ +VT NLNKIID YP+ +A +SN +HRPIGIGVQG AD ++G+
Sbjct: 459 GKVFNLNLLAKTVRLVTRNLNKIIDNALYPIPSAAKSNFKHRPIGIGVQGYADALAMMGI 518
Query: 537 PFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSD 596
++ ++ QLN+DIFETIY+ AL S ++A G YE+YHGSP S+G L D + V+ S
Sbjct: 519 AYE--DSMQLNRDIFETIYHAALTESCQLARVHGVYESYHGSPTSRGELHFDRYSVH-SQ 575
Query: 597 RWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVV 656
+ DW LR I++ G+RNSLLVAPMPTA+TSQ+ GN E FEP+TSN+Y RR SGEF +
Sbjct: 576 KCDWSSLRKDIARYGLRNSLLVAPMPTATTSQVFGNAESFEPFTSNMYQRRTQSGEFQLT 635
Query: 657 NKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVD 716
N HL+ DL + LW+ + I+Y++GS+Q I IPEEL+ IYKTVWEI KTL+DMA D
Sbjct: 636 NVHLVRDLERLNLWNDDMAQLIMYNNGSIQNITIIPEELRRIYKTVWEIPTKTLIDMAAD 695
Query: 717 RGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTS 774
RG YID SQS N+++ +P + ++TS+HF+AW +GLKTGMYYLR+++A +AI FTVD +
Sbjct: 696 RGAYIDQSQSFNLYVAEPTYSRMTSIHFYAWNKGLKTGMYYLRTKSATNAIPFTVDVN 753
>gi|370702993|ref|YP_004956795.1| orf47 gene product [Helicoverpa zea nudivirus 2]
gi|365199590|gb|AEW69596.1| ribonuclease reductase [Helicoverpa zea nudivirus 2]
Length = 938
Score = 829 bits (2141), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 398/778 (51%), Positives = 546/778 (70%), Gaps = 38/778 (4%)
Query: 3 VVKRDGKQEAVHFDKITARLKKL----SYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDE 58
+VKR+G E K+ AR+++ L+ + + V G+Y V+T +LD
Sbjct: 8 IVKRNGSVERFDPSKLYARIERCMTMSEPRLTTAFINIAGIVADVEKGLYDRVSTLELDT 67
Query: 59 LAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIAD 118
L +ET A+M+T HPD++ LAARI + LHK T+ FSETI+D+Y +A ++
Sbjct: 68 LLSETCASMSTAHPDHSILAARIAMQALHKRTRSKFSETIRDLY---------EANIVPQ 118
Query: 119 DVYDIIMKNAARLDSEIIYDRDFD-YDYFGFKTLERSYLLKV-QGKVVERPQHMLMRVAV 176
+D++ ++A LDS I+ DRDF YF +KTLER+YL+K+ GK+ ER QHM MR A+
Sbjct: 119 YYFDLVQEHADTLDSAIVDDRDFQSLTYFAYKTLERTYLIKLADGKICERVQHMYMRTAL 178
Query: 177 GIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLK 236
GIH DI+S I+TY+++S R++ H++PTL +A T R+ +SC+L+ +K+DSI G+ DTLK
Sbjct: 179 GIHGRDIESVIETYNLLSNRYYVHSTPTLCHAATNRSNYASCYLLELKEDSIGGVMDTLK 238
Query: 237 ECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGA 296
+ A ISK GG+G+ VH +R S I TNG ++G+VPMLR++N +RYV QGG KR GA
Sbjct: 239 DAATISKHCGGVGLHVHKLRCKNSTIHSTNGNASGLVPMLRMYNAMSRYVTQGGNKRPGA 298
Query: 297 FAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEA 356
AVYLEPWHAD+F+F+++RKN G EE RARDLFYALWVPDLFM+RV G WSL CP+ +
Sbjct: 299 IAVYLEPWHADVFDFIEMRKNSGFEEARARDLFYALWVPDLFMKRVNDGGYWSLMCPDSS 358
Query: 357 PGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSN 416
PGL+DCWG EFE YT YE+EG+ + V A+ LW I+ +Q+ETGTPY+L+KDT N+ SN
Sbjct: 359 PGLSDCWGEEFEAKYTAYEQEGRYVRRVDARELWKAIVTAQVETGTPYILYKDTVNRNSN 418
Query: 417 QQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSK 476
Q++LGTIK SNLCTE+++Y SP ETAVC LAS+ LP++V +
Sbjct: 419 QRHLGTIKGSNLCTEIVEYASPDETAVCVLASVNLPKFV--------------------E 458
Query: 477 NRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGM 536
+ F+ LA+ +VT NLNKIID YP+ +A +SN +HRPIGIGVQG AD ++G+
Sbjct: 459 GKVFNLNLLAKTVRLVTRNLNKIIDNALYPIPSAAKSNFKHRPIGIGVQGYADALAMMGI 518
Query: 537 PFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSD 596
++ ++ QLN+DIFETIY+ AL S ++A G YE+YHGSP S+G L D + V+ S
Sbjct: 519 AYE--DSMQLNRDIFETIYHAALTESCQLARVHGVYESYHGSPTSRGELHFDRYSVH-SQ 575
Query: 597 RWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVV 656
+ DW LR I++ G+RNSLLVAPMPTA+TSQ+ GN E FEP+TSN+Y RR SGEF +
Sbjct: 576 KCDWSSLRKDIARYGLRNSLLVAPMPTATTSQVFGNAESFEPFTSNMYQRRTQSGEFQLT 635
Query: 657 NKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVD 716
N HL+ DL + LW+ + I+Y++GS+Q I IPEEL+ IYKTVWEI KTL+DMA D
Sbjct: 636 NVHLVRDLERLNLWNDDMAQLIMYNNGSIQNITIIPEELRRIYKTVWEIPTKTLIDMAAD 695
Query: 717 RGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTS 774
RG YID SQS N+++ +P + ++TS+HF+AW +GLKTGMYYLR+++A +AI FTVD +
Sbjct: 696 RGVYIDQSQSFNLYVAEPTYSRMTSIHFYAWNKGLKTGMYYLRTKSATNAIPFTVDVN 753
>gi|343959472|dbj|BAK63593.1| ribonucleoside-diphosphate reductase large subunit [Pan
troglodytes]
Length = 570
Score = 827 bits (2137), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/589 (66%), Positives = 471/589 (79%), Gaps = 22/589 (3%)
Query: 223 MKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDT 282
MKDDSIEGIYDTLK+CA+ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+T
Sbjct: 1 MKDDSIEGIYDTLKQCALISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNT 60
Query: 283 ARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERV 342
ARYVDQGG KR GAFA+YLEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV
Sbjct: 61 ARYVDQGGNKRPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRV 120
Query: 343 QSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGT 402
++N WSL CPNE PGL + WG EFE+LY YEK+G+ +KVV+AQ LW+ I++SQ ETGT
Sbjct: 121 ETNQDWSLMCPNECPGLDEVWGEEFEKLYASYEKQGRVRKVVKAQQLWYAIIESQTETGT 180
Query: 403 PYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPM 462
PYML+KD+CN+KSNQQNLGTIK SNLCTE+++YTS E AVCNLAS+AL YV
Sbjct: 181 PYMLYKDSCNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV------- 233
Query: 463 ESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGI 522
+ +DF+KLAEVT +V NLNKIID+NYYPV A SN RHRPIGI
Sbjct: 234 ------------TSEHTYDFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRHRPIGI 281
Query: 523 GVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSK 582
GVQGLAD FIL+ PF+S EAQ LNK IFETIYY AL S ++A +GPYETY GSPVSK
Sbjct: 282 GVQGLADAFILMRYPFESAEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEGSPVSK 341
Query: 583 GILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSN 642
GILQ DMW V P+D WDW L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSN
Sbjct: 342 GILQYDMWNVTPTDLWDWKLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSN 401
Query: 643 IYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTV 702
IY+RRVLSGEF +VN HLL DLTE GLW +KN+II +GS+Q IP+IP++LK +YKTV
Sbjct: 402 IYTRRVLSGEFQIVNPHLLKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTV 461
Query: 703 WEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRA 762
WEI QKT++ MA +RG +ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR+R
Sbjct: 462 WEISQKTVLKMAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRP 521
Query: 763 AADAIKFTVDTSVLKENPKVTDDDDA---KMAQMVCSLTNREECMACGS 808
AA+ I+FT++ LK+ KV+ +++ A MVCSL NR+EC+ CGS
Sbjct: 522 AANPIQFTLNKEKLKDKEKVSKEEEEKERNTAAMVCSLENRDECLMCGS 570
>gi|194377918|dbj|BAG63322.1| unnamed protein product [Homo sapiens]
Length = 570
Score = 827 bits (2137), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/589 (66%), Positives = 470/589 (79%), Gaps = 22/589 (3%)
Query: 223 MKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDT 282
MKDDSIEGIYDTLK+CA+ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+T
Sbjct: 1 MKDDSIEGIYDTLKQCALISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNT 60
Query: 283 ARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERV 342
ARYVDQGG KR GAFA+YLEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV
Sbjct: 61 ARYVDQGGNKRPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRV 120
Query: 343 QSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGT 402
++N WSL CPNE PGL + WG EFE+LY YEK+G+ +KVV+AQ LW+ I+ SQ ETGT
Sbjct: 121 ETNQDWSLMCPNECPGLDEVWGEEFEKLYASYEKQGRVRKVVKAQQLWYAIIGSQTETGT 180
Query: 403 PYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPM 462
PYML+KD+CN+KSNQQNLGTIK SNLCTE+++YTS E AVCNLAS+AL YV
Sbjct: 181 PYMLYKDSCNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV------- 233
Query: 463 ESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGI 522
+ +DF+KLAEVT +V NLNKIID+NYYPV A SN RHRPIGI
Sbjct: 234 ------------TSEHTYDFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRHRPIGI 281
Query: 523 GVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSK 582
GVQGLAD FIL+ PF+S EAQ LNK IFETIYY AL S ++A +GPYETY GSPVSK
Sbjct: 282 GVQGLADAFILMRYPFESAEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEGSPVSK 341
Query: 583 GILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSN 642
GILQ DMW V P+D WDW L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSN
Sbjct: 342 GILQYDMWNVTPTDLWDWKVLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSN 401
Query: 643 IYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTV 702
IY+RRVLSGEF +VN HLL DLTE GLW +KN+II +GS+Q IP+IP++LK +YKTV
Sbjct: 402 IYTRRVLSGEFQIVNPHLLKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQLYKTV 461
Query: 703 WEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRA 762
WEI QKT++ MA +RG +ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR+R
Sbjct: 462 WEISQKTVLKMAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRP 521
Query: 763 AADAIKFTVDTSVLKENPKVTDDDDA---KMAQMVCSLTNREECMACGS 808
AA+ I+FT++ LK+ KV+ +++ A MVCSL NR+EC+ CGS
Sbjct: 522 AANPIQFTLNKEKLKDKEKVSKEEEEKERNTAAMVCSLENRDECLMCGS 570
>gi|401827749|ref|XP_003888167.1| ribonucleoside-diphosphate reductase [Encephalitozoon hellem ATCC
50504]
gi|392999367|gb|AFM99186.1| ribonucleoside-diphosphate reductase [Encephalitozoon hellem ATCC
50504]
Length = 769
Score = 826 bits (2133), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/788 (49%), Positives = 554/788 (70%), Gaps = 30/788 (3%)
Query: 9 KQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMT 68
+ E + + + ++++ + L ++H D + K+ +G + +T ++ + +ETAA+M
Sbjct: 11 RTEKLGIEGVRGQIEEYARILDLKHVDVNELMDKIISGWCEDMTRKEVMDYCSETAASMI 70
Query: 69 TNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNA 128
T HP+Y +++RIVVS +H+ T SFSE IK + H I++++Y+II++N
Sbjct: 71 TKHPEYGRISSRIVVSYIHEVTMDSFSEKIKYIQKHRG--------TISEEMYEIILENK 122
Query: 129 ARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAIK 188
+D+ I Y+ DF + YFG TL +SYL++V ++VERPQ + MR A+ IHK D + +
Sbjct: 123 ETIDAMINYENDFLFSYFGILTLMKSYLIRVGDEIVERPQDVFMRTALQIHKTDFERVKE 182
Query: 189 TYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGI 248
TY M+S+ +FTHA+PTL+N+ QL+SCFL+ K+DSIEG+Y + + AII+K +GGI
Sbjct: 183 TYDMLSEHYFTHATPTLYNSCLKNPQLASCFLISPKEDSIEGVYHMVNQAAIITKYSGGI 242
Query: 249 GVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADI 308
G+++H+IR+ GS ++ T G SNGIVP+++VFN T RY++QG +R G+ A+YLEPWH +I
Sbjct: 243 GLNLHSIRSKGSPLKNTGGRSNGIVPLIQVFNATKRYINQGAERRPGSIAIYLEPWHMEI 302
Query: 309 FEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFE 368
F+FLD+RKN G E+ RARD+F ALWV DLFMERV++N WSLFCP++A GL + WG EF
Sbjct: 303 FDFLDIRKNTGPEDLRARDMFIALWVNDLFMERVKNNEEWSLFCPSQAVGLDEVWGEEFN 362
Query: 369 RLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNL 428
LY KYEK ++ VV AQ LW I+++QIETGTPYM +KD CN+ SN Q+LGTIKSSNL
Sbjct: 363 ALYCKYEK-TISRTVVPAQKLWKAIIEAQIETGTPYMCYKDACNRLSNMQHLGTIKSSNL 421
Query: 429 CTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEV 488
C E+++Y+S ET+VCNLASI+LP++V KN FDFE +
Sbjct: 422 CAEIVEYSSGDETSVCNLASISLPKFV--------------------KNGVFDFESFRSI 461
Query: 489 TGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNK 548
I+T NLN++ID +YYP+E A+ SN+RHRPIGIGVQGLAD F +L PF+S EA++LNK
Sbjct: 462 VRIITINLNRVIDWSYYPIEEAKTSNMRHRPIGIGVQGLADLFAILRFPFESDEARKLNK 521
Query: 549 DIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMIS 608
+IFE +YY AL S E+A EGP+E+Y GS +SKGI ++ G S++WDW GLR+ I
Sbjct: 522 EIFEAMYYSALEASCELAEAEGPFESYEGSSISKGIFHFELAGKKASNKWDWEGLRERIK 581
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMG 668
+ G RNSLL+A MPT+ TSQI GNNE FEPY SNIY+RR +GEF +VN++L+ DL ++G
Sbjct: 582 RYGTRNSLLIALMPTSGTSQIFGNNEAFEPYASNIYTRRTHAGEFQIVNQYLIDDLVKLG 641
Query: 669 LWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLN 728
LWS +KN I+ ++GS+Q I IP +++ IYKTVWEIK K+++D+A DR +ID SQSLN
Sbjct: 642 LWSYEMKNLIVENEGSIQNITSIPSKIREIYKTVWEIKMKSVIDLAADRQAFIDQSQSLN 701
Query: 729 IHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDA 788
I + +P + +LTS+HF+ + GLKTGMYYLR+R AIKFTVD L E + + DA
Sbjct: 702 IFIAKPTYSQLTSMHFYGYHCGLKTGMYYLRTRPITSAIKFTVDKK-LAEKTLSSMNYDA 760
Query: 789 KMAQMVCS 796
+CS
Sbjct: 761 DEPCSMCS 768
>gi|449329866|gb|AGE96134.1| ribonucleoside diphosphate reductase [Encephalitozoon cuniculi]
Length = 768
Score = 825 bits (2131), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/779 (49%), Positives = 545/779 (69%), Gaps = 29/779 (3%)
Query: 9 KQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMT 68
K E + D I +R++ L + H D + +++ +G + +T + + +ETAA+M
Sbjct: 11 KSEKLGIDLIRSRIEGYVKDLKLRHVDVDELVERIVSGWCEDMTRKETIDYCSETAASMI 70
Query: 69 TNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNA 128
T HP+Y +++RI+VS +H+ T SF E IK + H ++++++Y II+++
Sbjct: 71 TKHPEYGQISSRIIVSYIHEITMDSFVEKIKYIQKHRG--------MVSEEMYGIILEHG 122
Query: 129 ARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAIK 188
++ I Y+ DF + YFG TL +SYL+KV +++ERPQ M MRVA+ IHK D + +
Sbjct: 123 ETIEGMINYENDFLFSYFGILTLMKSYLIKVGEEIIERPQDMFMRVALQIHKTDFEKVRE 182
Query: 189 TYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGI 248
Y+++S +FTHA+PTL+N+ QL+SCFL+ ++DSIEG+Y + + AII+K +GGI
Sbjct: 183 VYNLLSGHYFTHATPTLYNSCLKNPQLASCFLITPREDSIEGVYHMINQAAIITKYSGGI 242
Query: 249 GVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADI 308
G+++H IR+ GS +R T G SNGI+P+++V N T RY++QG +R G+ A++LEPWH +I
Sbjct: 243 GLNLHGIRSKGSSLRSTGGRSNGIIPLIQVLNATKRYINQGAERRPGSIAIFLEPWHMEI 302
Query: 309 FEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFE 368
F+FL+LRKN G EE RARD+F ALW+ DLFMERV++N WSLFCP++A GL+D WG EF
Sbjct: 303 FDFLELRKNTGPEEFRARDIFTALWINDLFMERVKNNEEWSLFCPSQAVGLSDVWGEEFN 362
Query: 369 RLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNL 428
LY KYEK ++ VV AQ LW I+++QIETGTPYM +KD CN+ SNQQ+LGTIKSSNL
Sbjct: 363 ALYCKYEKT-ISRTVVPAQKLWKAIIEAQIETGTPYMCYKDACNRLSNQQHLGTIKSSNL 421
Query: 429 CTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEV 488
C E+++Y+S ET+VCNLASI LP +V++ G FDFE V
Sbjct: 422 CAEIVEYSSGEETSVCNLASICLPMFVKDGG--------------------FDFEAFRRV 461
Query: 489 TGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNK 548
I+T NLN++ID NYYPVE ARRSN+R+RPIGIGVQGLAD F +L + F+S A+ LN+
Sbjct: 462 VKILTVNLNRVIDFNYYPVEEARRSNMRNRPIGIGVQGLADLFAILRLAFESDGARSLNQ 521
Query: 549 DIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMIS 608
DIFE +YY A+ S E+A +EGP+ +Y GSP+SKGI ++ G S WDW GLR+ I
Sbjct: 522 DIFEAMYYSAMEASCELAEKEGPFPSYEGSPISKGIFHFELAGRKASGNWDWEGLRERIR 581
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMG 668
++GVRNSLL+A MPTA TSQI GNNE FEP+ SNIY+RR +GEF +VN+HL++DL +G
Sbjct: 582 RHGVRNSLLIALMPTAGTSQIFGNNEAFEPHASNIYTRRTHAGEFQIVNQHLVNDLVRLG 641
Query: 669 LWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLN 728
LWS +KN +I ++GS+Q I IP E++ IYKT WEIK K+++D+A DR ++D SQSLN
Sbjct: 642 LWSYEMKNLVIENEGSIQNITSIPHEIREIYKTAWEIKMKSVIDLAADRQVFVDQSQSLN 701
Query: 729 IHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDD 787
I + +P + +LTS+HF+ + GLKTGMYYLR+R AIKFTVD + ++ +D D
Sbjct: 702 IFIAKPTYSQLTSMHFYGYHCGLKTGMYYLRTRPITSAIKFTVDKKLAEKTLSSMNDTD 760
>gi|19074701|ref|NP_586207.1| RIBONUCLEOSIDE DIPHOSPHATE REDUCTASE [Encephalitozoon cuniculi
GB-M1]
gi|51701818|sp|Q8SR37.1|RIR1_ENCCU RecName: Full=Ribonucleoside-diphosphate reductase large chain;
AltName: Full=Ribonucleotide reductase
gi|19069343|emb|CAD25811.1| RIBONUCLEOSIDE DIPHOSPHATE REDUCTASE [Encephalitozoon cuniculi
GB-M1]
Length = 768
Score = 824 bits (2129), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/779 (49%), Positives = 545/779 (69%), Gaps = 29/779 (3%)
Query: 9 KQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMT 68
K E + D I +R++ L + H D + +++ +G + +T + + +ETAA+M
Sbjct: 11 KSEKLGIDLIRSRIEGYVKDLKLRHVDVDELVERIVSGWCEDMTRKETIDYCSETAASMI 70
Query: 69 TNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNA 128
T HP+Y +++RI+VS +H+ T SF E IK + H ++++++Y II+++
Sbjct: 71 TKHPEYGQISSRIIVSYIHEITMDSFVEKIKYIQKHRG--------MVSEEMYGIILEHG 122
Query: 129 ARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAIK 188
++ I Y+ DF + YFG TL +SYL+KV +++ERPQ M MRVA+ IHK D + +
Sbjct: 123 ETIEGMINYENDFLFSYFGILTLMKSYLIKVGEEIIERPQDMFMRVALQIHKTDFEKVRE 182
Query: 189 TYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGI 248
Y+++S +FTHA+PTL+N+ QL+SCFL+ ++DSIEG+Y + + AII+K +GGI
Sbjct: 183 VYNLLSGHYFTHATPTLYNSCLKNPQLASCFLITPREDSIEGVYHMINQAAIITKYSGGI 242
Query: 249 GVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADI 308
G+++H IR+ GS +R T G SNGI+P+++V N T RY++QG +R G+ A++LEPWH +I
Sbjct: 243 GLNLHGIRSKGSSLRSTGGRSNGIIPLIQVLNATKRYINQGAERRPGSIAIFLEPWHMEI 302
Query: 309 FEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFE 368
F+FL+LRKN G EE RARD+F ALW+ DLFMERV++N WSLFCP++A GL+D WG EF
Sbjct: 303 FDFLELRKNTGPEEFRARDIFTALWINDLFMERVKNNEEWSLFCPSQAVGLSDVWGEEFN 362
Query: 369 RLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNL 428
LY KYEK ++ VV AQ LW I+++QIETGTPYM +KD CN+ SNQQ+LGTIKSSNL
Sbjct: 363 ALYCKYEKT-ISRTVVPAQKLWKAIIEAQIETGTPYMCYKDACNRLSNQQHLGTIKSSNL 421
Query: 429 CTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEV 488
C E+++Y+S ET+VCNLASI LP +V K+ +FDFE V
Sbjct: 422 CAEIVEYSSGEETSVCNLASICLPMFV--------------------KDGWFDFEAFRRV 461
Query: 489 TGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNK 548
I+T NLN++ID NYYPVE ARRSN+R+RPIGIGVQGLAD F +L + F+S A+ LN+
Sbjct: 462 VKILTVNLNRVIDFNYYPVEEARRSNMRNRPIGIGVQGLADLFAILRLAFESDGARSLNQ 521
Query: 549 DIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMIS 608
DIFE +YY A+ S E+A +EGP+ +Y GSP+SKGI ++ G S WDW GLR+ I
Sbjct: 522 DIFEAMYYSAMEASCELAEKEGPFPSYEGSPISKGIFHFELAGRKASGNWDWEGLRERIR 581
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMG 668
++GVRNSLL+A MPTA TSQI GNNE FEP+ SNIY+RR +GEF +VN+HL++DL +G
Sbjct: 582 RHGVRNSLLIALMPTAGTSQIFGNNEAFEPHASNIYTRRTHAGEFQIVNQHLVNDLVRLG 641
Query: 669 LWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLN 728
LWS +KN +I ++GS+Q I IP E++ IYKT WEIK K+++D+A DR ++D SQSLN
Sbjct: 642 LWSYEMKNLVIENEGSIQNITSIPHEIREIYKTAWEIKMKSVIDLAADRQVFVDQSQSLN 701
Query: 729 IHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDD 787
I + +P + +LTS+HF+ + GLKTGMYYLR+R AIKFTVD + ++ +D D
Sbjct: 702 IFIAKPTYSQLTSMHFYGYHCGLKTGMYYLRTRPITSAIKFTVDKKLAEKTLSSMNDTD 760
>gi|300706935|ref|XP_002995698.1| hypothetical protein NCER_101343 [Nosema ceranae BRL01]
gi|239604894|gb|EEQ82027.1| hypothetical protein NCER_101343 [Nosema ceranae BRL01]
Length = 738
Score = 823 bits (2127), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/759 (51%), Positives = 534/759 (70%), Gaps = 29/759 (3%)
Query: 29 LSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHK 88
+S+++ D KV G + +++ ++ +ETAA+M T +P+Y L+ARI++ +LH+
Sbjct: 1 MSLQNVDKNYFIDKVYNGWCEDMSSFEMITFVSETAASMMTINPEYGKLSARILICHLHE 60
Query: 89 NTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGF 148
T +FSE I + + N +I ++Y+I++KN +D I Y +D+D +F
Sbjct: 61 ITFNTFSEKIIYLQKYRN--------IINPEIYEIVVKNREIIDDIIDYTKDYDLTFFSI 112
Query: 149 KTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNA 208
+L +SYL +V +V+ERPQ + MRVA+ IH+D+ + +TY +MS +FTHA+PTL+N+
Sbjct: 113 TSLMKSYLFRVNDEVIERPQDIFMRVALQIHRDNWEKVKETYDLMSNHYFTHATPTLYNS 172
Query: 209 GTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGT 268
T R+QL+SCFL+ +DSIEGIYDTLK+CA+ISK +GGIG+++H+IR GS + T G
Sbjct: 173 CTIRSQLASCFLLSPINDSIEGIYDTLKQCAVISKHSGGIGLNLHSIRCNGSDLVSTGGK 232
Query: 269 SNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDL 328
S GI+P+++V N T +Y++QGG +R + A+YLEPWH DIF+FLDLRKN G E+ RARD+
Sbjct: 233 SRGIIPLIQVINSTKKYINQGGNRRSSSMAIYLEPWHKDIFDFLDLRKNTGSEDIRARDI 292
Query: 329 FYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQN 388
F ALW+ DLFMERV N WSLFCPNEA GL D WG +F +LYTKYE+ K + VV+A+
Sbjct: 293 FTALWINDLFMERVDKNEEWSLFCPNEAKGLDDVWGEDFNKLYTKYER-TKNRTVVKARK 351
Query: 389 LWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLAS 448
LW I+++QIETGTPYML+KDTCN+ SNQQNLG IKSSNLC E+I+Y+ E AVCNLAS
Sbjct: 352 LWKAIIEAQIETGTPYMLYKDTCNRLSNQQNLGIIKSSNLCAEIIEYSDKNEIAVCNLAS 411
Query: 449 IALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVE 508
+ L R+VRE FDFE+L+++ ++T NLN ID +YPVE
Sbjct: 412 VCLSRFVREGK--------------------FDFEELSKIVKVITRNLNNCIDSTFYPVE 451
Query: 509 TARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAR 568
+RSN RHRPIGIGVQGLAD F+L+ PFDS A+ LN IFETIYY AL S E+A
Sbjct: 452 ECKRSNFRHRPIGIGVQGLADAFVLMRYPFDSQNARDLNFKIFETIYYSALEESVELAKE 511
Query: 569 EGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQ 628
GPYET+ GSP+SKGI ++ + W LR+ I K+GVRNSLLV+PMPTASTSQ
Sbjct: 512 YGPYETFAGSPLSKGIFHFELCKKKVPNLEKWNLLREKIKKHGVRNSLLVSPMPTASTSQ 571
Query: 629 ILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKI 688
I NNECFEP+TSNIY+RR +GEF +VN++LL DL + LWS +KN II +GS+Q I
Sbjct: 572 IFNNNECFEPFTSNIYTRRTHAGEFQIVNQYLLKDLINLNLWSHEMKNLIIEYEGSIQNI 631
Query: 689 PQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWL 748
IP+++K +YKT WE+K K ++D+A DR +ID SQSLN+ + QP + KL+S+HF+A+
Sbjct: 632 KSIPQDIKDLYKTAWELKMKHVIDLAADRQLFIDQSQSLNLFVAQPTYSKLSSMHFYAFK 691
Query: 749 RGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDD 787
GLKTGMYYLR+R AIKFTVD +L++ +D+D
Sbjct: 692 SGLKTGMYYLRTRPITSAIKFTVDQKLLEKTMSSINDND 730
>gi|387866126|ref|YP_003358255.2| ribonucleotide reductase subunit 1 [Anguillid herpesvirus 1]
gi|387866034|gb|ADA57879.2| ribonucleotide reductase subunit 1 [Anguillid herpesvirus 1]
Length = 889
Score = 822 bits (2122), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/784 (49%), Positives = 543/784 (69%), Gaps = 14/784 (1%)
Query: 3 VVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAE 62
V K G+ E K+ ++L+ LSYGL+ + D + G+Y G+TT +LD++ A
Sbjct: 6 VRKHSGRTEMWSTKKMLSKLESLSYGLNTDFVDLDRLVTATMDGLYDGITTKELDDVMAR 65
Query: 63 TAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYD 122
TAA T+ H DY+ LA RIVV+++HK T +F + + N + P + D++
Sbjct: 66 TAAGFTSYHFDYSLLAGRIVVNSIHKYTVGNFLQGAVLLQNMDETK-----PHVTDELVA 120
Query: 123 IIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDD 182
+ K ++ I Y RD+ +++F +TLER+YLLKV +V+ERPQH+ MR+A+GIH D
Sbjct: 121 VARKYENQIQGAIDYSRDYTFNFFAIRTLERAYLLKVNERVMERPQHLFMRIAIGIHGFD 180
Query: 183 IDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIIS 242
++S ++TY +S++ F+HASPTLF+AGT A+L+SC+LV + DDSI GIY TL+ECA I+
Sbjct: 181 LESVLETYRCLSEKRFSHASPTLFHAGTNFAKLASCYLVTLADDSIAGIYSTLQECAQIA 240
Query: 243 KSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLE 302
K +GGIG ++ N+RA GS I TNGT+NG+VPMLRVFN R VDQGG KR GA AV+LE
Sbjct: 241 KCSGGIGAAISNVRAEGSAINSTNGTANGLVPMLRVFNAMTRMVDQGGNKRPGAMAVWLE 300
Query: 303 PWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADC 362
PWHADI +LDL+KN G + RARDLFY LW+ DLFMERV+ + +WSL CP + PGL D
Sbjct: 301 PWHADIAAWLDLKKNLGDDGIRARDLFYGLWISDLFMERVKDDQMWSLMCPKKCPGLMDV 360
Query: 363 WGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGT 422
+G++F LYTKYE +G K V+A+ LW IL+SQ+E G P+M++KD+CN+KSNQQ++G
Sbjct: 361 YGSDFVALYTKYESQGMYVKQVEARELWTHILRSQMENGMPFMMYKDSCNRKSNQQHVGV 420
Query: 423 IKSSNLCTEVIQYTSPTETAVCNLASIALPRYVR-EMGVPMESHPSKLVGSRGSK----- 476
+K NLCTE+++ + P AVCNLA++ LP V E G+ S + +
Sbjct: 421 VKCGNLCTEIVEVSEPHRPAVCNLAAVCLPTCVACECGIRQASRTEVASSASSAVQACED 480
Query: 477 ---NRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFIL 533
+ FDF +L +T ++ +NLN++ID + Y + A N + RP+GIGVQGLAD F +
Sbjct: 481 PTCRKSFDFGELGRLTEVLVKNLNRVIDKSDYAFDGANHRNSQDRPLGIGVQGLADVFAM 540
Query: 534 LGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVN 593
LG+ FD TEA +LN IFET+YYHA+ S ++A + PY TY GSPVS+GI Q DMWGV
Sbjct: 541 LGLAFDGTEAARLNVQIFETMYYHAMAASCKLAEEDQPYPTYKGSPVSQGIFQFDMWGVK 600
Query: 594 PSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEF 653
PS DW L+ + K GVRNSLL+APMPTAST+QI GNNE FEP+T+N+++R VLSG+F
Sbjct: 601 PSAMHDWTSLKRRVQKYGVRNSLLLAPMPTASTAQIFGNNEAFEPFTNNLFTRGVLSGDF 660
Query: 654 VVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDM 713
++N HL+ +L +G+W + +++ D+GS++ +P+ + ++KTVWEI QKT+++M
Sbjct: 661 QIINPHLVRELIRLGMWGEETRMRLMADNGSIRTWEDVPQHTRDVFKTVWEISQKTIINM 720
Query: 714 AVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDT 773
A DR +ID SQSLNIHM PN KL+S+H + W +GLKTGMYYLRSR A +AI+FTVD
Sbjct: 721 AADRAPFIDQSQSLNIHMADPNVSKLSSMHMYGWQKGLKTGMYYLRSRPAVNAIQFTVDK 780
Query: 774 SVLK 777
+ ++
Sbjct: 781 TKVR 784
>gi|357541940|gb|AET84702.1| ribonucleotide reductase [Ostreococcus lucimarinus virus OlV4]
Length = 607
Score = 816 bits (2107), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 380/617 (61%), Positives = 480/617 (77%), Gaps = 19/617 (3%)
Query: 156 LLKVQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQL 215
L ++ G ++E PQ+M MRVA+GIH +DIDS ++TY MS+ F HA+PTLFNAGTPR Q+
Sbjct: 2 LQRLDGVLMETPQYMFMRVAIGIHGEDIDSVLETYDKMSRGMFIHATPTLFNAGTPRPQM 61
Query: 216 SSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPM 275
SSCFL+ K+DSI GIY TL ECA ISK AGGIG+ +H++RA S IRGTNG S+GI+PM
Sbjct: 62 SSCFLIANKEDSINGIYGTLTECAQISKWAGGIGMHIHDVRANKSRIRGTNGQSDGIIPM 121
Query: 276 LRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVP 335
LRVFN TARYV+Q G +RKG+ AVYLEPWHADI EFL+LR N G EE R RDLF ALW+P
Sbjct: 122 LRVFNATARYVNQAG-RRKGSIAVYLEPWHADIMEFLELRLNQGDEEARCRDLFSALWIP 180
Query: 336 DLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILK 395
DLFM+RV+ +G WSLFCP++APGL+D G EFE LYTKYE+EG+A V A ++W ILK
Sbjct: 181 DLFMKRVEESGNWSLFCPDKAPGLSDAVGEEFEALYTKYEEEGRATATVPAADVWKAILK 240
Query: 396 SQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYV 455
SQ ETGTPYML+KD CN+KSNQ+NLG IKSSNLCTE++++T ETAVCNLASIALP+YV
Sbjct: 241 SQTETGTPYMLYKDACNQKSNQKNLGVIKSSNLCTEILEFTDKDETAVCNLASIALPKYV 300
Query: 456 REMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNL 515
S+ + FD+EKL EVT VT+NLN++ID N+YPVETAR+SN+
Sbjct: 301 ------------------DSETKTFDYEKLHEVTKTVTKNLNRVIDRNFYPVETARKSNM 342
Query: 516 RHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETY 575
RHRPIG+GVQGLAD FIL FDS EA+++N IFET+Y+ AL SSE+A +GPYET+
Sbjct: 343 RHRPIGLGVQGLADVFILCRHAFDSDEAKEINARIFETMYHAALEASSELAEVDGPYETF 402
Query: 576 HGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNEC 635
GSP S+G+LQ DMW +DW L++ I + G+RNSLL+APMPTAST+QILGNNEC
Sbjct: 403 EGSPASQGVLQFDMWEGETKLHYDWDALKERIKERGLRNSLLMAPMPTASTAQILGNNEC 462
Query: 636 FEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEEL 695
FEPYT+NIY RR L+GEFV+VNKHL+ DL E+GLWS +K+ ++ GS+Q I IP+E+
Sbjct: 463 FEPYTTNIYLRRTLAGEFVIVNKHLVDDLKEIGLWSKDMKDLMVKAGGSIQNIVDIPDEI 522
Query: 696 KAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGM 755
K +Y+TVWEIK K ++DMA DRG +ID SQS+N+ M+ P KL+S+H ++W +GLKTGM
Sbjct: 523 KKLYRTVWEIKMKDVIDMAADRGRFIDQSQSMNLFMESPTMSKLSSMHMYSWKKGLKTGM 582
Query: 756 YYLRSRAAADAIKFTVD 772
YYLRS+A A I+F+++
Sbjct: 583 YYLRSKAKARPIQFSLE 599
>gi|118197505|ref|YP_874319.1| ribonucleotide reductase large subunit [Ectropis obliqua NPV]
gi|37039662|gb|AAQ88175.1| ribonucleotide reductase large subunit [Ectropis obliqua NPV]
Length = 760
Score = 815 bits (2105), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/776 (50%), Positives = 547/776 (70%), Gaps = 32/776 (4%)
Query: 3 VVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAE 62
V KRD ++ KI L+ LS L+ D + ++ + V+TSQL L A
Sbjct: 4 VTKRDNAKQCFDQKKIVKTLQNLSVDLNKNLIDCEALVAQLKKTLVSNVSTSQLCVLLAR 63
Query: 63 TAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYD 122
+A+M H +YA LA R++V + HK ++ + ++YN L++ Y
Sbjct: 64 ESASMAYIHDEYAMLAGRLMVIDNHKQVSDDYAVVVDNLYNQ---------NLVSAQFYK 114
Query: 123 IIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDD 182
+ N +++ + Y+ D+DY YFGFKTLE YL ++GKV ER QHM MRVA+ IH +D
Sbjct: 115 SAIANMHTINATLNYNLDYDYKYFGFKTLENGYLKTIEGKVAERIQHMYMRVALTIHGND 174
Query: 183 IDSAIK----TYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKEC 238
D I+ TY++M+ + +THASPTLF +G+ AQL+SCFL+ +K+DSI GIY+TL++C
Sbjct: 175 TDDCIENVFETYNLMAHKMYTHASPTLFASGSCYAQLASCFLLNIKEDSIVGIYETLRDC 234
Query: 239 AIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA 298
A+ISK GGIG+SVHN+RA GS+I TNGT+NG+ MLRV+N+ R+VDQGG KRKGA A
Sbjct: 235 ALISKFGGGIGLSVHNVRARGSFIESTNGTANGLEAMLRVYNNAVRHVDQGG-KRKGAMA 293
Query: 299 VYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPG 358
+Y+EPWHADI++FL+L++N G E+ +ARDL YALWVPDLFM+RV+++G+WSL CP E+P
Sbjct: 294 IYVEPWHADIYDFLELKRNMGAEDRKARDLLYALWVPDLFMKRVEADGMWSLMCPRESPL 353
Query: 359 LADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQ 418
L G+EFE+LY YEK GK + ++A++L+ I+++Q+ETGTPYM++KD CN KSNQ+
Sbjct: 354 LDTVHGSEFEQLYVAYEKCGKFVRQIKARDLFRTIVETQVETGTPYMMYKDACNMKSNQK 413
Query: 419 NLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNR 478
+LGTIK+SNLC E+++Y+ E+AVCNLASI + ++V VG
Sbjct: 414 HLGTIKNSNLCAEIVEYSDKNESAVCNLASICVNQFV-----------DIDVGE------ 456
Query: 479 YFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPF 538
++FE L VT IV +NLNKIID+NYYP+ +A++SN +HRPIG+G+QGLADTF +L MP+
Sbjct: 457 -YNFEMLKYVTKIVVKNLNKIIDINYYPLLSAQKSNRKHRPIGVGIQGLADTFAMLRMPY 515
Query: 539 DSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRW 598
+S +A+ LN I ETIY+ AL S E+A G +++Y SP S GILQ D+W P+ W
Sbjct: 516 ESDQAKVLNTKIAETIYFGALEASCELAKAYGVHDSYFSSPASLGILQYDLWNHTPTSMW 575
Query: 599 DWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNK 658
DW L+ I ++G+RNSL VA MPTA+T+QILGNNE FEP+T+NIY RRVL+G+F V+NK
Sbjct: 576 DWTQLKKDIKQHGLRNSLCVAYMPTATTAQILGNNESFEPFTNNIYVRRVLAGDFQVINK 635
Query: 659 HLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRG 718
+L DL ++ L++ ++NKII ++GSVQ I +IP+ ++ +YKTVWE+K K L+ MA DRG
Sbjct: 636 YLTDDLIKLNLYNEQMRNKIIANNGSVQNIEEIPKHVRELYKTVWEMKVKNLIGMAADRG 695
Query: 719 CYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTS 774
+ID SQS NI + QP + LT++H H W GLKTGMYYLR++ AADAIKFTVD S
Sbjct: 696 PFIDQSQSFNIFLSQPTYALLTTIHMHTWKSGLKTGMYYLRTKPAADAIKFTVDKS 751
>gi|332022563|gb|EGI62865.1| Ribonucleoside-diphosphate reductase large subunit [Acromyrmex
echinatior]
Length = 748
Score = 811 bits (2094), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/747 (52%), Positives = 519/747 (69%), Gaps = 20/747 (2%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG +E VHFDKIT R++ L YGL + + DP ++ +V T + GVTTS+LD LA
Sbjct: 8 MHVLKRDGHKEPVHFDKITGRIEALCYGLDMNYVDPSAIALRVITNLCSGVTTSELDNLA 67
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA M HPDYA+LA+RI +SNLHK TKK FSE I ++Y + + P+I++
Sbjct: 68 AETAATMINQHPDYATLASRIAISNLHKETKKVFSEVIANLYYAKSSITNEHLPIISEKY 127
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y II NA +L+S I+YDRDF+Y Y FK LE +LLK+ GKVVERPQHMLMR+AV IH
Sbjct: 128 YQIIQNNADKLNSAILYDRDFNYSYATFKMLESDHLLKLNGKVVERPQHMLMRIAVAIHG 187
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID I+TY+ MS+++F +A+ T+ A T Q++S FL+ M DSI+GI DTL+ I
Sbjct: 188 EDIDKVIETYNFMSKQYFIYAAQTIDTACTITQQMASTFLLTMSGDSIDGILDTLERFTI 247
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
+ G IG +VH IRA + IRGT G SNG+VPML+ + DT+ K +G VY
Sbjct: 248 LCDYNGEIGFNVHCIRAKNTPIRGTGGVSNGLVPMLKTY-DTSIGTVSKNDKNEGPITVY 306
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DIFEFLDL+++ G+E+ RA+ + Y LW P+LFM+RV + +WSL CP+E PGL
Sbjct: 307 LEPWHSDIFEFLDLKRSIGEEQLRAKGMCYGLWTPNLFMKRVFDDDVWSLMCPHECPGLI 366
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE LYTKYE+EG+ ++ ++A+ LW I++ Q ETG PY++FKD CN KSN Q+L
Sbjct: 367 EAWGDEFETLYTKYEQEGRFRRQIKARELWLLIIQIQCETGVPYIIFKDHCNYKSNHQHL 426
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK S+ TEV+QY+S E A+CN ASIA+ +V S + F
Sbjct: 427 GTIKCSSFSTEVVQYSSSDEVAMCNTASIAVNMFV------------------NSTKKVF 468
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF KL E+ IVT NL+K+IDVN YP+ A+ S +HR IGIGVQGLAD FIL+ PF+S
Sbjct: 469 DFYKLKEIAKIVTHNLDKMIDVNVYPLPEAKLSCDKHRSIGIGVQGLADAFILMRYPFES 528
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EA +LN IFET+YY AL S EIA +GPYE+Y SP+S+GILQ DMW V P++ WDW
Sbjct: 529 KEANELNVQIFETLYYGALEASCEIATEKGPYESYKDSPISEGILQFDMWHVKPTNLWDW 588
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I+K+G+RNSLL+A M A +Q+L NN EPY SNIY+ LS ++ ++ HL
Sbjct: 589 DILKAKIAKHGLRNSLLIAQMSDAFMAQMLENNMSIEPYMSNIYTIHALSKQYSIIKPHL 648
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DL E GLW + NKII++ GS+Q I +IPE+LK +YKTVWE+ QKT+ +MA RG +
Sbjct: 649 LRDLIEKGLWDENMCNKIIFNGGSIQNIEEIPEDLKLLYKTVWEMPQKTIFEMAASRGPF 708
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAW 747
ID SQ LN+HM P KLTS+HF AW
Sbjct: 709 IDQSQCLNVHMIDP-LEKLTSMHFFAW 734
>gi|254567974|ref|XP_002491097.1| One of two large regulatory subunits of ribonucleotide-diphosphate
reductase [Komagataella pastoris GS115]
gi|238030894|emb|CAY68817.1| One of two large regulatory subunits of ribonucleotide-diphosphate
reductase [Komagataella pastoris GS115]
gi|328352376|emb|CCA38775.1| ribonucleoside-diphosphate reductase subunit M1 [Komagataella
pastoris CBS 7435]
Length = 774
Score = 808 bits (2086), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 404/806 (50%), Positives = 543/806 (67%), Gaps = 50/806 (6%)
Query: 10 QEAVHFDKITARLK----KLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAA 65
+EA+ FD+ ARLK KLS+GL+++ D LV +KV + + + L L +E A
Sbjct: 5 KEAISFDE--ARLKRSLLKLSFGLNLKFVDIALVVEKVSLAIIENLHLQDLLNLTSEILA 62
Query: 66 AMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIM 125
+++T H DY++LAAR++ ++L K SF + + H GL I
Sbjct: 63 SLSTRHYDYSNLAARLLSNHLRKRLGDSFFANCERLAEHGFVDKGL---------LTIAR 113
Query: 126 KNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS 185
N+ +LD I +RDFD+DYFG+ TL+ YLLK ++E PQ + MRVA+GIH +D+ S
Sbjct: 114 SNSEQLDGSIKPERDFDFDYFGYMTLQSIYLLKKDDLILETPQFLFMRVALGIHGEDLSS 173
Query: 186 AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSA 245
AI+TY +MSQ +F HASPTLF+AGTP LSSCFL+ ++D + +Y +L + A+IS +A
Sbjct: 174 AIQTYDLMSQGYFIHASPTLFHAGTPTPYLSSCFLMGLQDADVNSVYQSLHKIAMISNAA 233
Query: 246 GGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWH 305
GGIG++VH+I A + + GIVP+++V N+TARYV QG KR AFA+YLEPWH
Sbjct: 234 GGIGINVHDIPAE-------DACNRGIVPLIKVLNETARYVQQGSNKRPSAFAIYLEPWH 286
Query: 306 ADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGT 365
++F+ L+LRKNHGKEE RARDLFYALW+PDLFME+V+ N W LF P A GL D +G
Sbjct: 287 EEVFDLLNLRKNHGKEEIRARDLFYALWIPDLFMEKVEKNEDWCLFNPLHAKGLNDVYGE 346
Query: 366 EFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKS 425
+F LY +YEK+G + + AQ LW I+ +QIETGTP+ML+KD+CN+KSNQ NLGTI+
Sbjct: 347 QFNLLYAEYEKKGMYVRKIPAQQLWNAIVDAQIETGTPFMLYKDSCNRKSNQSNLGTIQC 406
Query: 426 SNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKL 485
SNLC E+++Y+S + AVCNLASI LP+YV + FDFE L
Sbjct: 407 SNLCCEIVEYSSRDQIAVCNLASIGLPKYVVDGK--------------------FDFESL 446
Query: 486 AEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQ 545
IVTENLNK+ID++ YPV A SN RP+ IGVQGL DTF+LL +P+DS EA
Sbjct: 447 KNSVRIVTENLNKVIDISKYPVPEASYSNDLTRPMAIGVQGLWDTFMLLKIPYDSEEAAA 506
Query: 546 LNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSD-RWDWGGLR 604
LN IFETIYY AL TS IA ++GPY+++ GSP SKG+LQ D+W V D DW LR
Sbjct: 507 LNSQIFETIYYSALETSMNIAKKDGPYKSFQGSPASKGLLQMDLWNVKEEDLTLDWKSLR 566
Query: 605 DMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDL 664
I K+G+RNSLLV PMPTASTSQILG E FEP + N Y+RRV SGE+ VVNK+L+ DL
Sbjct: 567 SDIVKHGLRNSLLVGPMPTASTSQILGFCESFEPLSYNFYTRRVSSGEYQVVNKYLIDDL 626
Query: 665 TEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHS 724
+GLW+ ++ +II +DGS+Q+I +IP+E+K++YKTVWEI Q+ ++MA DRG +ID S
Sbjct: 627 INLGLWTDSLRQEIIGNDGSIQEIDEIPQEVKSLYKTVWEISQRITINMAADRGRFIDQS 686
Query: 725 QSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTD 784
QS+N+++ +PN GKLT++HF+AW +GLKTGMYYLR++AA+ AIKF++D S K +
Sbjct: 687 QSMNLYLAKPNRGKLTAMHFYAWKKGLKTGMYYLRTKAASSAIKFSIDISKRKRDGTYNT 746
Query: 785 DDDAKMAQM-------VCSLTNREEC 803
+ Q C L N E C
Sbjct: 747 PTKRQAVQSEALETTPSCQLNNCESC 772
>gi|384498832|gb|EIE89323.1| ribonucleoside-diphosphate reductase, alpha subunit [Rhizopus
delemar RA 99-880]
Length = 745
Score = 806 bits (2082), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/769 (51%), Positives = 518/769 (67%), Gaps = 35/769 (4%)
Query: 47 VYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYN-HY 105
+Y G+TT QLDELAAE A HPD+ LAAR+ +SNL K T ++FS +K +YN +
Sbjct: 1 MYPGITTVQLDELAAEIAVDAAVVHPDFVILAARLSISNLQKETHENFSNVVKALYNDNT 60
Query: 106 NERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVE 165
+ ++G P++ + ++ ++A +++S I Y RDF +DYFGFK LE++ LLK+ K VE
Sbjct: 61 HPKTGAANPIVTKEFVKLVDEHAEKINSVIDYKRDFYFDYFGFKNLEKNLLLKIGNKTVE 120
Query: 166 RPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKD 225
RPQHM MRVA+ IH D++SA KTY +S+ +THA+ TL NAGT QLSS F V MKD
Sbjct: 121 RPQHMFMRVALTIHGQDLESAFKTYDYLSRHLYTHATTTLINAGTVCGQLSSFFEVQMKD 180
Query: 226 DSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARY 285
DSIEGIYDT+ CA I+K G +G+S IRA+GSYI GTNGTSNGI+PMLRVFND AR+
Sbjct: 181 DSIEGIYDTVTNCARIAKVFGSVGMSFQKIRASGSYIAGTNGTSNGIIPMLRVFNDAARF 240
Query: 286 VDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSN 345
+ G K KG FAVY+EPWHADIFEF++L + +G+E RAR L LW+PDLFM+RV+ N
Sbjct: 241 ITPGSRKVKGTFAVYVEPWHADIFEFIELSRQNGEENLRARHLLLGLWIPDLFMKRVEEN 300
Query: 346 GLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYM 405
G WSL CPNE PGL +G FE LY +YEK GKA+K V AQ LWF IL +QIE+G P+M
Sbjct: 301 GDWSLMCPNECPGLDVSYGEAFEELYIRYEKAGKARKTVSAQKLWFSILDTQIESGMPFM 360
Query: 406 LFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESH 465
+KD N+KSNQ+NLG I S +QY E CN+ASIAL + V
Sbjct: 361 CYKDAANRKSNQKNLGVITGSTFYANTMQYADAEEIGSCNVASIALSKCV---------- 410
Query: 466 PSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQ 525
+ R F+FE LA++ IV +NL+K+IDVN Y E + S L+HR + +GVQ
Sbjct: 411 --------DTNTRSFNFEVLADIVKIVVKNLDKMIDVNNYVSEETKNSALKHRGLSLGVQ 462
Query: 526 GLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGIL 585
GLAD F+++ PFDS EA+QLNKDIFE IY+ AL S+E+A GPY +Y GSP+S+GIL
Sbjct: 463 GLADVFLMMRYPFDSDEARQLNKDIFEHIYFAALEASNELAQASGPYPSYEGSPISQGIL 522
Query: 586 QPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYS 645
Q D+W V SD W LR I +GVRNSLLVAPMPT +TS LGN++ EPY S +Y+
Sbjct: 523 QHDLWNVKGSDCLKWDDLRAKIKAHGVRNSLLVAPMPTTATSVCLGNSDGIEPYKSMLYT 582
Query: 646 RRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEI 705
R S + V+N HL+ DL E G+WSP IK+ ++ D+GS+Q I IP++LK +YKT WEI
Sbjct: 583 RPAHSRDRHVINPHLVGDLIERGIWSPKIKDMLLKDNGSIQNIAIIPDDLKKLYKTAWEI 642
Query: 706 KQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAAD 765
Q+ ++D+A DR +ID SQSLN+ +PN+G+L+S+HF+AW +GLKTGM YLR+
Sbjct: 643 PQRVIIDLAADRAPFIDQSQSLNLFSAEPNYGRLSSMHFYAWKKGLKTGMQYLRTNPH-- 700
Query: 766 AIKFTVDTSVLKENPKVTDDD--------DAKMAQMVCSLTNREECMAC 806
+ V+ EN K T ++ +A M CSL N E C++C
Sbjct: 701 ------ELVVINENEKETAENVDQEVEKTANNLAAMSCSLDNPESCVSC 743
>gi|215401394|ref|YP_002332698.1| ribonucleotide reductase large subunit [Helicoverpa armigera
multiple nucleopolyhedrovirus]
gi|198448894|gb|ACH88684.1| ribonucleotide reductase large subunit [Helicoverpa armigera
multiple nucleopolyhedrovirus]
Length = 761
Score = 804 bits (2076), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/774 (50%), Positives = 534/774 (68%), Gaps = 33/774 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDG+ E V K+ R+ +L + L+ + P VS KV G+ TT +D A
Sbjct: 1 MYVVKRDGRLEQVSSSKLYQRIHRLCHDLNSQFVHPRAVSLKVIKGLSDNTTTEDIDIYA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
A AAA+T H DY +LA R++V+N+HK +SF++ ++ ++ H L++D++
Sbjct: 61 ASVAAALTYKHYDYDTLAGRLLVTNMHKYVDESFTKVVQRLHKH---------NLVSDEL 111
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+ +K++ ++ I D DY+YFG++TL+ YL+K+ KV ER QHM MR+A+GI
Sbjct: 112 LSVTIKHSKIIEENIDMKLDLDYNYFGYQTLKNGYLIKINEKVAERIQHMHMRIALGIFG 171
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDIDSAIK+Y +S++ +THASPT+F AGT Q+SSCFL+ M+ DSI GIY+TL +CAI
Sbjct: 172 DDIDSAIKSYKFLSRKMYTHASPTMFAAGTLTPQMSSCFLLTMESDSIRGIYNTLNDCAI 231
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK GGIG++V+++R S I+ TNGT++G++PMLRVFN+ R+VDQGG KRKGA AVY
Sbjct: 232 ISKHGGGIGLNVNSVRGRNSKIKSTNGTASGLLPMLRVFNNMVRHVDQGG-KRKGAQAVY 290
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWH DI + L +R+N G E+ +ARDL ALWVPD+FM+RV+ NG+WSL CPNE P L
Sbjct: 291 VEPWHCDIMDVLHMRRNIGSEDTKARDLMNALWVPDIFMKRVEENGIWSLMCPNECPKLN 350
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G +FE Y YE +G+ ++ + A L I++ Q ETGTPYML+KD CN+KSNQ N
Sbjct: 351 DTYGDDFEYWYKHYEDKGQFREQMPAVTLMRNIIEIQAETGTPYMLYKDACNRKSNQSNC 410
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G IK SNLC E++QY +P ETAVCNLASIA+ +Y+ N F
Sbjct: 411 GLIKCSNLCAEIVQYCAPDETAVCNLASIAVNKYI--------------------NNDTF 450
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+ L V V +LNKIID N+YP+ETA++SN+RHRPIGIG+QGLAD F++L +P+ S
Sbjct: 451 DFQLLHTVVKHVVNSLNKIIDRNFYPIETAKKSNMRHRPIGIGIQGLADAFVMLRIPYVS 510
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
A LNK I ET+Y+ AL S E+A+ PY T+ GS S+GILQ D+W P+ WDW
Sbjct: 511 DAAVLLNKQIAETVYHAALEASYELASVSEPYSTFAGSKASEGILQYDLWNTVPTSLWDW 570
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I K G+RNSLLVA MPTA+T+QIL NNE FEP+ SN++ RRVLSGEF VVN++L
Sbjct: 571 SQLKMNIQKYGLRNSLLVAYMPTATTAQILNNNESFEPFHSNLFLRRVLSGEFQVVNRYL 630
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQ---KTLVDMAVDR 717
+ DL ++ L++ ++ I+ + GS+ I +IP+ LK +Y T+WEI + K +++MA DR
Sbjct: 631 VDDLIKLNLYTNSMRKTIMANRGSIASIAKIPDNLKKLYMTIWEIWENNGKYMIEMAADR 690
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTV 771
G +ID SQS N++M P K+ S+H + W RGLKTGMYY R+ AA++ +FTV
Sbjct: 691 GAFIDQSQSFNVYMANPTLPKMASVHMYGWKRGLKTGMYYFRTLPAANSQQFTV 744
>gi|357289663|gb|AET72976.1| ribonucleoside-diphosphate reductase [Phaeocystis globosa virus
12T]
gi|357292461|gb|AET73797.1| ribonucleoside-diphosphate reductase [Phaeocystis globosa virus
14T]
Length = 835
Score = 802 bits (2072), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 414/833 (49%), Positives = 543/833 (65%), Gaps = 82/833 (9%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR GK+E + FDKI R+KK GL++++ +S KV + ++T+ +DEL
Sbjct: 1 MHVIKRSGKKEVISFDKILKRIKKTGKGLNLQNVIYASLSMKVIDQLKDDISTTDIDELT 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
A+ A+M + HPDY LA+ I VSNLHKNT SF +T+K +Y+ +++ + K LI DDV
Sbjct: 61 AQQCASMASKHPDYTKLASAITVSNLHKNTDASFYKTVKKLYD-FSDINDNKYKLIHDDV 119
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+ K LD I Y+RDF +DYFGFKTLER+YLL++ G +VERPQHM MRV++ IH
Sbjct: 120 MATVEKYQVELDEMIDYNRDFLFDYFGFKTLERAYLLRIDGVIVERPQHMWMRVSICIHG 179
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+++ +TY MS ++F HA+PTLFNAGTPR QLSSC+L+ M+DDSIEGI++T+KECA
Sbjct: 180 SNLEKIKETYDYMSNKYFIHATPTLFNAGTPRPQLSSCYLLSMEDDSIEGIFNTVKECAQ 239
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK +GGIG+ +HN+R++GS+IRGTNGTSNGI+PML VFN TARYVDQGG KR G+FA+Y
Sbjct: 240 ISKWSGGIGLHIHNVRSSGSHIRGTNGTSNGIIPMLGVFNKTARYVDQGG-KRNGSFAMY 298
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEP H DI EFL+LRKNHG EE +ARDLFYA+W D+FMERV N +WSLFCP++ PGL+
Sbjct: 299 LEPHHPDIEEFLELRKNHGDEESKARDLFYAIWASDVFMERVIGNKIWSLFCPDKCPGLS 358
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC+G ++ LY KYE EG+ K + A++LW +IL +Q+ETGTPY+L+KD CN KSNQ+NL
Sbjct: 359 DCYGEDYRTLYMKYESEGRYNKQINARDLWLKILDAQMETGTPYILYKDACNSKSNQKNL 418
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIKSSNLC E+++Y+ ETAVCNLASI L +V E ++ F
Sbjct: 419 GTIKSSNLCCEIVEYSDDKETAVCNLASIGLGMFVNE-------------------DKTF 459
Query: 481 DFEKLAEVTGIVTENLNKIID--------------------------------------- 501
D+ KLA+VT ++ NLN IID
Sbjct: 460 DYVKLADVTKVLVTNLNNIIDVNFYPNKKTSRSNYRHRPVGIGVQGLADTFFKMDIAFTS 519
Query: 502 -----VNYYPVETA-----RRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQ---QLNK 548
VN Y ET +SN R G G++ L ++ F E +
Sbjct: 520 EEAKTVNKYIFETIYFAALEKSNDISRERGEGMEYLKTEYVAKKWSFTDQEPDCRTYVIS 579
Query: 549 DIFETIYYHALR----TSSEI----AAREGPYETYHGSPVSKGILQPDMWGVNP-SDRWD 599
D + L+ SEI A G Y ++ GSP+S G Q D+W P SDR+D
Sbjct: 580 DETDVKLAAQLKECKPIKSEIDDLNAGLMGAYSSFIGSPISNGQFQFDLWNEKPCSDRYD 639
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR I K+G+RNSLL APMPTASTSQILGNNECFEP TSNIYSR+ L+GEF +VNK+
Sbjct: 640 WDTLRAKIVKHGIRNSLLCAPMPTASTSQILGNNECFEPITSNIYSRKTLAGEFTMVNKY 699
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
L+ +L + LW +KN II + GSVQ I +PE +K YK VWEIK KTL+DMA DRG
Sbjct: 700 LVDELLALKLWDESVKNNIIANKGSVQYIDGLPEHIKEKYKIVWEIKMKTLIDMARDRGL 759
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
YI SQS+N+ M+ P LT++HF+ W GLKTG+YYLR + A +FT++
Sbjct: 760 YICQSQSMNLWMEDPEPKSLTNMHFYGWRAGLKTGIYYLRRKPKHHAQQFTIE 812
>gi|22549569|ref|NP_689342.1| rr1 gene product [Mamestra configurata NPV-B]
gi|22476748|gb|AAM95154.1| putative ribonucletide reductase large subunit-like protein
[Mamestra configurata NPV-B]
Length = 761
Score = 802 bits (2071), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/774 (49%), Positives = 535/774 (69%), Gaps = 33/774 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDG+ E V K+ R+ +L + L+ + P VS KV G+ TT +D A
Sbjct: 1 MYVVKRDGRLEQVSSSKLYQRIHRLCHDLNSQFVHPRAVSLKVIKGLSDNTTTEDIDIYA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
A AAA+T H DY +LA R++V+N+HK +SF++ ++ ++ H L++D++
Sbjct: 61 ASVAAALTYKHYDYDTLAGRLLVTNMHKYVDESFTKVVQRLHKH---------NLVSDEL 111
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+ +K++ ++ I D DY+YFG++TL+ YL+K+ KV ER QHM MR+A+GI
Sbjct: 112 LSVTIKHSKIIEENIDMKLDLDYNYFGYQTLKNGYLIKINEKVAERIQHMHMRIALGIFG 171
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDIDSAIK+Y +S++ +THASPT+F AG+ Q+SSCFL+ M+ DSI GIY+TL +CA+
Sbjct: 172 DDIDSAIKSYKFLSRKMYTHASPTMFAAGSLTPQMSSCFLLTMESDSIRGIYNTLNDCAM 231
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK GGIG++V+++R S I+ TNGT++G++PMLRVFN+ R+VDQGG KRKGA AVY
Sbjct: 232 ISKHGGGIGLNVNSVRGRNSKIKSTNGTASGLLPMLRVFNNMVRHVDQGG-KRKGAQAVY 290
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWH DI + L +R+N G E+ +ARDL ALWVPD+FM+RV+ NG+WSL CPNE P L
Sbjct: 291 VEPWHCDIMDVLHMRRNIGSEDTKARDLMNALWVPDIFMKRVEENGIWSLMCPNECPKLN 350
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G +FE Y YE +G+ ++ + A L I++ Q ETGTPYML+KD CN+KSNQ N
Sbjct: 351 DTYGDDFEYWYKHYEDKGQFREQMPAVTLMRNIIEIQAETGTPYMLYKDACNRKSNQSNC 410
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G IK SNLC E++QY +P ETAVCNLASIA+ +Y+ N F
Sbjct: 411 GLIKCSNLCAEIVQYCAPDETAVCNLASIAVNKYI--------------------NNDTF 450
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+ L V V ++LNKIID N+YP+ETA++SN+RHRPIGIG+QGLAD F++L +P+ S
Sbjct: 451 DFQLLHTVVKHVVDSLNKIIDRNFYPIETAKKSNMRHRPIGIGIQGLADAFVMLRIPYVS 510
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
A LNK I ET+Y+ AL S E+A+ PY T+ GS S+GILQ D+W P+ WDW
Sbjct: 511 DAAVLLNKQIAETVYHAALEASYELASVSEPYSTFAGSKASEGILQYDLWNTVPTSLWDW 570
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I K G+RNSLLVA MPTA+T+QIL NNE FEP+ SN++ RRVLSGEF VVN++L
Sbjct: 571 SQLKINIQKYGLRNSLLVAYMPTATTAQILNNNESFEPFHSNLFLRRVLSGEFQVVNRYL 630
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQ---KTLVDMAVDR 717
+ DL ++ L++ ++ I+ + GS+ I +IP+ LK +Y T+WEI + K +++MA DR
Sbjct: 631 VDDLIKLNLYTNSMRKTIMANRGSIASIAKIPDNLKKLYMTIWEIWENNGKYMIEMAADR 690
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTV 771
G +ID SQS N++M P K+ S+H + W RGLKTGMYY R+ AA++ +FTV
Sbjct: 691 GAFIDQSQSFNVYMANPTLPKMASVHMYGWKRGLKTGMYYFRTLPAANSQQFTV 744
>gi|390165363|gb|AFL65010.1| rr1 [Mamestra brassicae MNPV]
Length = 761
Score = 798 bits (2061), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/774 (49%), Positives = 532/774 (68%), Gaps = 33/774 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDG+ E V K+ R+ +L + L+ + P VS KV G+ TT +D A
Sbjct: 1 MYVVKRDGRLEQVSSSKLYQRIHRLCHDLNSQFVHPRAVSLKVIKGLSDNTTTEDIDIYA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
A AA +T H DY +LA R++V+N+HK +SF++ ++ ++ H L++D++
Sbjct: 61 ASVAATLTYKHYDYDTLAGRLLVTNMHKYVDESFTKVVQRLHKH---------NLVSDEL 111
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+ +K++ ++ I D DY+YFG++TL+ YL+K+ KV E QHM MR+A+GI
Sbjct: 112 LSVTIKHSKIIEENIDMKLDLDYNYFGYQTLKNGYLIKINEKVAETIQHMHMRIALGIFG 171
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDIDSAIK+Y +S++ +THASPT+F AGT Q+SSCFL+ M+ DSI GIY+TL +CA+
Sbjct: 172 DDIDSAIKSYKFLSRKMYTHASPTMFAAGTLTPQMSSCFLLTMESDSIRGIYNTLNDCAM 231
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK GGIG++V+++R S I+ TNGT++G++PMLRVFN+ R+VDQGG KRKGA AVY
Sbjct: 232 ISKHGGGIGLNVNSVRGRNSKIKSTNGTASGLLPMLRVFNNMVRHVDQGG-KRKGAQAVY 290
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWH DI + L +R+N G E+ +ARDL ALWVPD+FM+RV+ NG+WSL CPNE P L
Sbjct: 291 VEPWHCDIMDVLHMRRNIGSEDTKARDLMNALWVPDIFMKRVEENGIWSLMCPNECPKLN 350
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G +FE Y YE +G+ ++ + A L I++ Q ETGTPYML+KD CN+KSNQ N
Sbjct: 351 DTYGDDFEYWYKHYEDKGQFREQMPAVTLMRNIIEIQAETGTPYMLYKDACNRKSNQSNC 410
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G IK SNLC E++QY +P ETAVCNLASIA+ +Y+ N F
Sbjct: 411 GLIKCSNLCAEIVQYCAPDETAVCNLASIAVNKYI--------------------NNDTF 450
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+ L V V +LNKIID N+YP+ETA++SN+RHRPIGIG+QGLAD F++L +P+ S
Sbjct: 451 DFQLLHTVVKHVVNSLNKIIDRNFYPIETAKKSNMRHRPIGIGIQGLADAFVMLRIPYVS 510
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
A LNK I ET+Y+ AL S E+A+ PY T+ GS S+GILQ D+W P+ WDW
Sbjct: 511 DAAVLLNKQIAETVYHAALEASYELASVSEPYSTFAGSKASEGILQYDLWNTVPTSLWDW 570
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I K G+RNSLLVA MPTA+T+QIL NNE FEP+ SN++ RRVLSGEF VVN++L
Sbjct: 571 SQLKINIQKYGLRNSLLVAYMPTATTAQILNNNESFEPFHSNLFLRRVLSGEFQVVNRYL 630
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQ---KTLVDMAVDR 717
+ DL ++ L++ ++ I+ + GS+ I +IP+ LK +Y T+WEI + K +++MA DR
Sbjct: 631 VDDLIKLNLYTNSMRKTIMANRGSIASIAKIPDNLKKLYMTIWEIWENNGKYMIEMAADR 690
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTV 771
G +ID SQS N++M P K+ S+H + W RGLKTGMYY R+ AA++ +FTV
Sbjct: 691 GAFIDQSQSFNVYMANPTLPKMASVHMYGWKRGLKTGMYYFRTLPAANSQQFTV 744
>gi|145527768|ref|XP_001449684.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124417272|emb|CAK82287.1| unnamed protein product [Paramecium tetraurelia]
Length = 621
Score = 796 bits (2057), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/591 (62%), Positives = 458/591 (77%), Gaps = 21/591 (3%)
Query: 193 MSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSV 252
MSQ++FTHA+PTLFN+GTP Q+SSCFL+ M DDSIEGIY+TLK CA+ISKSAGGIG+SV
Sbjct: 1 MSQKYFTHATPTLFNSGTPYPQMSSCFLLDMVDDSIEGIYETLKRCALISKSAGGIGLSV 60
Query: 253 HNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFL 312
IR+ SYIRGTNG SNG+VPML+VFNDTARYVDQGGGKRKG+FA+YLEPWH+DI FL
Sbjct: 61 SKIRSQDSYIRGTNGISNGLVPMLKVFNDTARYVDQGGGKRKGSFAIYLEPWHSDIISFL 120
Query: 313 DLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYT 372
LRKNHG EE RARDLF LW+PDLFM+RV+ + W+L CPNE PGL DC+G EF +LYT
Sbjct: 121 QLRKNHGIEEQRARDLFLGLWIPDLFMQRVKDDSDWTLMCPNECPGLQDCYGQEFNKLYT 180
Query: 373 KYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEV 432
YE + + ++A+ LW EI+ +QI TG PYML+KD CN KSNQ+NLGTIKSSNLCTE+
Sbjct: 181 DYESKNMGRVTMKARQLWQEIIDAQISTGLPYMLYKDACNSKSNQKNLGTIKSSNLCTEI 240
Query: 433 IQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIV 492
IQYTSP E AVCNLASI L + ++E ++ F+F+KL E+T I+
Sbjct: 241 IQYTSPDEVAVCNLASINLQKLIKE-------------------DKTFNFDKLLEITKII 281
Query: 493 TENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFE 552
T NLN +ID+N+YPV+ A SN R+RPIGIGVQG AD + +PFDS +A +LN IFE
Sbjct: 282 TTNLNIVIDLNFYPVQQAEYSNKRNRPIGIGVQGFADALQRMKIPFDSEDALELNAKIFE 341
Query: 553 TIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGV 612
TIYY A S E+A + GPYET+ GSP S+GILQ DMWGV+P +DW L+ I K G+
Sbjct: 342 TIYYGACERSLELAQQLGPYETFAGSPASQGILQFDMWGVSPK-LYDWNTLKQNIVKYGM 400
Query: 613 RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSP 672
RNSLL+APMPTASTSQIL NNE FEPYT+NIY+RRVL+GEFV +N HL+ DL E+ LW+P
Sbjct: 401 RNSLLIAPMPTASTSQILQNNESFEPYTTNIYTRRVLAGEFVCINPHLVDDLIELNLWTP 460
Query: 673 IIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMD 732
IKNK+I ++GSVQ I +IP +K +YKTVWEI QK ++++A R +ID SQSLNIHM
Sbjct: 461 QIKNKLIMNNGSVQNIDEIPTNIKQLYKTVWEISQKAILNLATSRAPFIDQSQSLNIHMA 520
Query: 733 QPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDT-SVLKENPKV 782
+P K+TS+HF+AW +GLKTGMYYLR+R AAD IKFTVD ++LKE ++
Sbjct: 521 EPTMSKVTSMHFYAWEKGLKTGMYYLRTRPAADPIKFTVDVEALLKEGGQI 571
>gi|68304287|ref|YP_249755.1| RR1 [Chrysodeixis chalcites nucleopolyhedrovirus]
gi|67973116|gb|AAY84082.1| RR1 [Chrysodeixis chalcites nucleopolyhedrovirus]
Length = 780
Score = 796 bits (2056), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 392/777 (50%), Positives = 539/777 (69%), Gaps = 33/777 (4%)
Query: 3 VVKRDGKQE-AVHFDKITARLKKLSYGL--SIEHCDPVLVSQKVCTGVYKGVTTSQLDEL 59
++ R+G++ V+ D I L S L + E+ D ++ K+ G+Y + + +E
Sbjct: 7 MILRNGRESIKVNMDYIKTYLYTRSGDLKKNKEYIDFNYIADKIFCGIYDNIHEDEFEEY 66
Query: 60 AAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADD 119
+A A+ T H Y+ LA I V+ LH T+ +S+ ++ ++ K ++ D
Sbjct: 67 SANVCASQTYKHYVYSDLAVVIAVNKLHAKTEDDYSKVVEILW---------KNGILCDS 117
Query: 120 VYDIIMKNAARLDSEIIYDRDFDYDYFGFKTL-ERSYLLKVQGKVVERPQHMLMRVAVGI 178
Y I++K+ +++ I YD D Y YFG TL E YL++V VVERPQHMLMRVA+ I
Sbjct: 118 FYSIVIKHLDSINASISYDFDKHYTYFGLMTLIEGKYLMRVDNIVVERPQHMLMRVALQI 177
Query: 179 HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKEC 238
H DDI+SAI++Y +M + FTHASPTLF++G Q+SSC+L+ +++DSI GIY TL +C
Sbjct: 178 HGDDIESAIESYRLMRAKLFTHASPTLFSSGMKMPQMSSCYLLNIQEDSINGIYKTLNDC 237
Query: 239 AIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA 298
A+ISK GGIG++V IRAT S I TNGT+ G+ P LRVFN R+VDQGG KRKGA
Sbjct: 238 AMISKHGGGIGLNVTQIRATNSKIESTNGTAAGLGPALRVFNSMLRHVDQGG-KRKGAMT 296
Query: 299 VYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPG 358
VY+EPWHAD+F FLDL++N G E+ +ARDL +A+W PDLFM+RV++ G WSL CP+E PG
Sbjct: 297 VYIEPWHADVFTFLDLKRNMGAEDMKARDLLFAMWTPDLFMKRVKTGGKWSLMCPDECPG 356
Query: 359 LADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQ 418
L DC+G EFE LY YE EGK KK + A +L +I+++Q+ETG PYM+FKD N K+NQ+
Sbjct: 357 LNDCYGQEFEDLYENYEAEGKFKKQISALDLHRKIIETQVETGAPYMMFKDHVNNKNNQK 416
Query: 419 NLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNR 478
N G I++SNLC E++QY+ ETAVCNLASIA+ + + + +
Sbjct: 417 NEGVIRNSNLCAEIVQYSDNRETAVCNLASIAVNNFANK------------------QFK 458
Query: 479 YFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPF 538
FDF+ L V+ +VT NLNKIID+N+YP+ +A+ SN RHRPIGIG+QGLADTF +L MP+
Sbjct: 459 SFDFKSLYNVSRVVTNNLNKIIDLNFYPLASAQASNFRHRPIGIGIQGLADTFAILDMPY 518
Query: 539 DSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPS-DR 597
DS EA+ LNK I ETIYY AL S E+A G Y++Y GSP S G+LQ D+W +N S D
Sbjct: 519 DSQEARDLNKKISETIYYGALSQSIELAKLHGTYDSYDGSPASCGLLQFDLWNINQSNDL 578
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
W+W L+ ++ +G+RNSLL+A MPTA+T+QILGNNE FEP+TSN+Y RRVLSGE+ VVN
Sbjct: 579 WNWDELKREMAMHGLRNSLLIAYMPTATTAQILGNNESFEPFTSNLYVRRVLSGEYQVVN 638
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
+HL+ L + ++S I KII ++GSVQ I +IP +KA++KT WEIKQK ++DMA +R
Sbjct: 639 QHLVDKLVDTNVYSTDIMIKIIKNNGSVQNIDEIPHNIKALFKTAWEIKQKVVLDMAAER 698
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTS 774
G YID SQSLN+ + P + L+S+H ++W +GLKTGMYYLR++ AA+ I+FTV +S
Sbjct: 699 GPYIDQSQSLNLFVANPTYKVLSSIHDYSWEKGLKTGMYYLRTKPAANTIQFTVPSS 755
>gi|12002837|gb|AAG43397.1|AF168794_1 ribonucleotide reductase subunit M1 [Xenopus laevis]
Length = 520
Score = 796 bits (2056), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/539 (67%), Positives = 439/539 (81%), Gaps = 19/539 (3%)
Query: 189 TYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGI 248
TY+++S++WFTHASPTLFNAGT R QLSSCFL+CMKDDSIEGIYDTLK+CA+ISKSAGGI
Sbjct: 1 TYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLCMKDDSIEGIYDTLKQCALISKSAGGI 60
Query: 249 GVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADI 308
GV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+YLEPWH D+
Sbjct: 61 GVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIYLEPWHYDV 120
Query: 309 FEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFE 368
F+FLDL+KN GKEE RARDLFYA+W+PDLFM+RV++N WSL CP+E PGL + WG +FE
Sbjct: 121 FDFLDLKKNTGKEEQRARDLFYAMWIPDLFMKRVENNLDWSLMCPHECPGLEEVWGDKFE 180
Query: 369 RLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNL 428
LY KYE+EG+A+KVV+AQ +W+ I++SQ ETGTPYML+KD CN+KSNQQNLGTIK SNL
Sbjct: 181 ELYEKYEREGRARKVVKAQQVWYAIIESQTETGTPYMLYKDACNRKSNQQNLGTIKCSNL 240
Query: 429 CTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEV 488
CTE+++YTS E AVCNLAS+AL YV + R FDF+KLA+V
Sbjct: 241 CTEIVEYTSEKEVAVCNLASLALNMYV-------------------TSERSFDFKKLADV 281
Query: 489 TGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNK 548
T ++ +NLNKII++N+YPV A SN +HRPIGIGVQGLAD FIL+ PF S +AQ LNK
Sbjct: 282 TKVIVKNLNKIIEINFYPVPEAEYSNKKHRPIGIGVQGLADAFILMRYPFQSEKAQMLNK 341
Query: 549 DIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMIS 608
IFETIYY AL +S E+A GPYETY G PVSKGILQ DMW V P+D WDW L++ I+
Sbjct: 342 QIFETIYYAALESSCELAKELGPYETYEGCPVSKGILQYDMWNVTPTDLWDWTALKEKIA 401
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMG 668
K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL+ DLTE G
Sbjct: 402 KYGIRNSLLLAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHLMKDLTEQG 461
Query: 669 LWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSL 727
LW+ +KN+II ++GS+Q +P IP ELK +YKTVWEI QKT++ MA DRG +ID SQSL
Sbjct: 462 LWNEEMKNQIIANNGSIQNVPDIPAELKELYKTVWEISQKTVITMAADRGAFIDQSQSL 520
>gi|429963199|gb|ELA42743.1| ribonucleoside-diphosphate reductase, alpha subunit [Vittaforma
corneae ATCC 50505]
Length = 771
Score = 796 bits (2055), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 374/748 (50%), Positives = 523/748 (69%), Gaps = 29/748 (3%)
Query: 31 IEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNT 90
+EH D K+ G + T +L + +E AAA+ T H DYA LAA I+ + T
Sbjct: 23 LEHIDVADFLDKISLGTTPEMGTEELAKFCSEAAAALFTTHSDYAKLAAAILTTFHQSIT 82
Query: 91 KKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKT 150
+SFSE IK + + L+ ++Y++I++NA DS I Y RDF+ YF +
Sbjct: 83 LESFSEKIKLIKQN--------TSLLNLEIYELIIQNAPVYDSMIDYSRDFNLSYFSVHS 134
Query: 151 LERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGT 210
L RSY++K+ + +ERPQ + MR A+ IH++D +TY ++S +FTHA+PTLFN+
Sbjct: 135 LLRSYMIKINRRPIERPQDVFMRAAIQIHRNDFYRVKQTYDLISMGYFTHATPTLFNSCL 194
Query: 211 PRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSN 270
QL+SCFL+ K+DS+EGIY+T+K+CAIISK +GG+G+S+HNIR GS ++ T G S
Sbjct: 195 KTCQLASCFLISPKEDSLEGIYNTIKDCAIISKYSGGLGLSLHNIRCKGSPLKSTGGYSK 254
Query: 271 GIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFY 330
G+VP++++ N+T +YV+ GG KR+ A YLEPWH D+F++LD+RKN G EE RARD+F
Sbjct: 255 GVVPVIKIINETMKYVNLGGIKRQSTIAFYLEPWHMDVFDYLDVRKNSGNEEMRARDIFI 314
Query: 331 ALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLW 390
A+W+ DLFMERV+++ WSLF PNEA GL D WG EF++LY KYEK ++ V+ AQ L+
Sbjct: 315 AMWINDLFMERVENDEEWSLFDPNEAKGLYDVWGDEFKKLYLKYEK-TLSRVVIPAQKLF 373
Query: 391 FEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIA 450
I+ SQIETGTPYM++KDTCN+ SNQQNLGTI+SSNLC E+I+Y++ E AVCNLAS+
Sbjct: 374 KAIINSQIETGTPYMVYKDTCNRYSNQQNLGTIRSSNLCAEIIEYSASDEIAVCNLASVC 433
Query: 451 LPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETA 510
LP +V KN FDF L EV NLN++ID N+YPV
Sbjct: 434 LPAFV--------------------KNGVFDFNALREVVKAALVNLNRVIDNNFYPVPET 473
Query: 511 RRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREG 570
RSNL+HRP+GIG+QGLADTF L PF+S +A++LNK I ET+Y+ A+ +S+E+A +EG
Sbjct: 474 SRSNLKHRPVGIGIQGLADTFSKLRYPFESQQARELNKLIAETMYFAAIESSAELAMQEG 533
Query: 571 PYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQIL 630
PY ++ GSP+SKGI +M+G PS W+W LR + + GVRNSL +A MPTA TSQ+
Sbjct: 534 PYSSFVGSPLSKGIFHFEMYGAQPSGMWNWEELRAKVLQYGVRNSLFIALMPTAGTSQLF 593
Query: 631 GNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQ 690
GN+ECFEPYTSNI++RR ++GEF VVN +L+ DL +G+W+ +KN II +GS+Q IP
Sbjct: 594 GNSECFEPYTSNIFTRRTVAGEFQVVNTYLMEDLERLGMWNEEMKNIIIEHEGSIQSIPC 653
Query: 691 IPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRG 750
IP+E+K +YKTVWEIK K+++D+A DR ++D S S+NI + QP F +L+S+HF+ W R
Sbjct: 654 IPQEIKNLYKTVWEIKMKSVIDLAADRQPFVDQSMSMNIFLAQPTFAQLSSMHFYGWRRK 713
Query: 751 LKTGMYYLRSRAAADAIKFTVDTSVLKE 778
+KTGMYYLR++ + IKFTV+ ++++
Sbjct: 714 IKTGMYYLRTKPILNPIKFTVNQELVEK 741
>gi|219118138|ref|XP_002179850.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408903|gb|EEC48836.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 926
Score = 792 bits (2046), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 417/829 (50%), Positives = 544/829 (65%), Gaps = 109/829 (13%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
++V KRDG+ E + K+ RL LS GL + + V +++ + G+Y VTT ++D LA
Sbjct: 67 LHVSKRDGRLELLDSTKLLQRLTDLSDGLDMRFLNLVALTESIVRGMYPNVTTHEIDVLA 126
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA++ T HPDY LAARI+++ HK T FSE I+ +YN SG I V
Sbjct: 127 AETAASLGTQHPDYGRLAARILITQNHKTTPTCFSEAIETLYN-----SG--KGFIDHKV 179
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQG--KVVERPQHMLMRVAVGI 178
+++ + +DS I+++RD + YFG+KTLER+YLLK +V+ERPQ+++MRVA+GI
Sbjct: 180 GELVRRRGPEIDSRIVHERDLEMTYFGYKTLERAYLLKKDNGNQVLERPQYLMMRVALGI 239
Query: 179 H---------KDD-IDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSI 228
H +DD +++A +TY +MS+ +FTHASPTLF+AGT QLSSCFLV M +DSI
Sbjct: 240 HCTSKMSSRSEDDCLEAAFETYDLMSRGFFTHASPTLFHAGTTHPQLSSCFLVQMSEDSI 299
Query: 229 EGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQ 288
GIYDTLK CA+ISK+AGGIG+SVHNIRA G+ I+GT G SNG+VPMLRVF+ T+RYVDQ
Sbjct: 300 NGIYDTLKRCAVISKAAGGIGLSVHNIRARGTPIQGTRGVSNGLVPMLRVFDVTSRYVDQ 359
Query: 289 GGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLW 348
GGGKR GAFA+YLEPWHADIF+ L L+KNHGKEE RARDLFY LW+PDLFM+RV+ + +W
Sbjct: 360 GGGKRPGAFAIYLEPWHADIFDVLSLKKNHGKEEQRARDLFYGLWIPDLFMKRVEEDDVW 419
Query: 349 SLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFK 408
SL CP++ PGLA C+G +FE LY YE+EGK + V+A+ LW IL+SQIETGTPYML+K
Sbjct: 420 SLMCPHQCPGLAHCYGAKFEALYQHYEQEGKFVRQVRARELWGAILESQIETGTPYMLYK 479
Query: 409 DTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRY-VREMGVPMESHPS 467
DTCN KSNQQN+GTI+ SNLCTE+IQY+ ETAVCNLASI LPR+ V E G P
Sbjct: 480 DTCNTKSNQQNIGTIQCSNLCTEIIQYSDQEETAVCNLASICLPRFVVSERGTFGSISPE 539
Query: 468 KLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
S + +FD E L IVT NLN IIDVN YPV+ A+ SN +HRPIGIGV GL
Sbjct: 540 -------SGSAFFDHEALHRAAKIVTRNLNSIIDVNSYPVDGAKTSNFKHRPIGIGVSGL 592
Query: 528 ADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQP 587
AD F+ LG+PF S A++LN+ IFETIY+ AL S+E+A +EGPYET+ GSP S+G LQ
Sbjct: 593 ADAFLRLGLPFTSAAAKKLNEAIFETIYHAALEASAELAEKEGPYETFAGSPASQGKLQF 652
Query: 588 DMWGVN----PSDR----------------------WDWGGLRDMISKNGVRNSLLVAPM 621
++WG++ PS + +DW LR I K G+RNSL A
Sbjct: 653 NLWGLSDDETPSHKYALAKETPVPIQMYPNSSNVCGYDWESLRRRIVKTGLRNSLSWAST 712
Query: 622 PTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYD 681
+S S + +N+++ D
Sbjct: 713 SVSSLS-------------------------------------------AQTFRNQMMRD 729
Query: 682 DGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTS 741
GSVQ IP IP+ LK +YKTVWEIK K ++DM DRG +ID + PN KLT+
Sbjct: 730 GGSVQNIPDIPDRLKELYKTVWEIKMKDIIDMGADRGKFIDQN---------PNMDKLTA 780
Query: 742 LHFHAWLRGLKTGMYYLRSRAAADAIKFTVD----TSVLKENPKVTDDD 786
+HF+AW +GLKTGMYYLR++ A +AI++TV+ T ++ P+ DD
Sbjct: 781 MHFYAWKKGLKTGMYYLRTKPAVNAIQYTVEKISPTVIVGGIPEAEPDD 829
>gi|74229829|ref|YP_309033.1| ribonucleotide reductase (rr1) [Trichoplusia ni SNPV]
gi|72259743|gb|AAZ67514.1| ribonucleotide reductase (rr1) [Trichoplusia ni SNPV]
Length = 772
Score = 791 bits (2044), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 395/805 (49%), Positives = 550/805 (68%), Gaps = 42/805 (5%)
Query: 6 RDGKQEAVHFDKITARLKKLSYGLSI--EHCDPVLVSQKVCTGVYKGVTTSQLDELAAET 63
R+G+ V FD I + L S L+ EH D ++ K+ G+Y + + ++ +A
Sbjct: 4 RNGQSAVVDFDSIKSYLYCRSGDLTKNKEHIDFDHIADKIINGIYDNIDQDEFEDYSARV 63
Query: 64 AAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDI 123
A+ T H Y+ LAA I ++ LH T+ +S+ + ++ R+G+ + D Y I
Sbjct: 64 CASQTYKHYVYSDLAAMIAINKLHAKTEDDYSKVVDILW-----RNGV----LCDSFYWI 114
Query: 124 IMKNAARLDSEIIYDRDFDYDYFGFKTL-ERSYLLKVQGKVVERPQHMLMRVAVGIHKDD 182
+KNA +++ I YD D Y YFG T+ E YL++V VERPQHMLMRVA+ IH +D
Sbjct: 115 AVKNANVINAAISYDFDKQYTYFGLMTMIEGGYLMRVNNVTVERPQHMLMRVALQIHGED 174
Query: 183 IDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIIS 242
I+SAI++Y +M + FTHASPTLF++G Q+SSC+L+ +++DSI GIY TL +CA+IS
Sbjct: 175 IESAIESYRLMRSKLFTHASPTLFSSGMKMPQMSSCYLLNIQEDSINGIYKTLNDCAMIS 234
Query: 243 KSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLE 302
K GGIG++V IRA S I+ TNGT+ G+ P LRVFN R+VDQGG KRKGA AVY+E
Sbjct: 235 KHGGGIGLNVSQIRAANSKIKSTNGTAAGLGPALRVFNSMLRHVDQGG-KRKGALAVYIE 293
Query: 303 PWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADC 362
PWHADIF FLDL++N G E+ +ARDLF+A+W P LFM+RV + WSL CP+E PGL DC
Sbjct: 294 PWHADIFTFLDLKRNMGAEDMKARDLFFAMWTPSLFMKRVSAGEKWSLMCPDECPGLNDC 353
Query: 363 WGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGT 422
+G EFERLY YE +GK K+ + A +L +I++ Q+ETG PYML KD N+K+NQ+NLG
Sbjct: 354 YGEEFERLYESYETQGKFKEQILALDLHRKIIEIQVETGGPYMLHKDNVNEKNNQKNLGV 413
Query: 423 IKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDF 482
I++SNLC E++QY+ ETAVCNLASIA+ + + + + FDF
Sbjct: 414 IRNSNLCAEIVQYSDNKETAVCNLASIAVNCFANK------------------RTKNFDF 455
Query: 483 EKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTE 542
E L +V +VT NLNKIID N+YP+ +A+ SN +HRPIGIG+QGLAD F +L +P+DS +
Sbjct: 456 ESLYKVARVVTNNLNKIIDKNFYPLTSAQVSNFKHRPIGIGIQGLADAFAILNLPYDSQQ 515
Query: 543 AQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPS-DRWDWG 601
A++LN+ I ETIYY AL S E+A G Y++Y+GSP S G LQ D+W ++ S D W+W
Sbjct: 516 ARELNRKISETIYYGALSQSIELAKLHGAYDSYNGSPASSGHLQFDLWNISQSNDLWNWD 575
Query: 602 GLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
L+ ++ +G+RNSLL+A MPTA+T+QILGNNE FEP+TSN+Y RRVLSGE+ +VN+HL+
Sbjct: 576 ELKRQMAIHGLRNSLLIAYMPTATTAQILGNNESFEPFTSNLYVRRVLSGEYQIVNQHLV 635
Query: 662 HDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYI 721
L + ++S + KII ++GSVQ I IP ++KA++KT WEIKQK L++MA DRG YI
Sbjct: 636 DKLVDCNVYSTELMMKIIKNNGSVQNIDDIPHDVKALFKTAWEIKQKVLLNMAADRGPYI 695
Query: 722 DHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPK 781
D SQSLN+ + P++ L+S+H ++W +GLKTGMYYLR++ AA+ I+FTV +S P
Sbjct: 696 DQSQSLNLFVANPSYKILSSIHNYSWEKGLKTGMYYLRTKPAANTIQFTVPSSSPFTKPS 755
Query: 782 VTDDDDAKMAQMVCSLTNREECMAC 806
TDD A++ C + C +C
Sbjct: 756 -TDD-----AELTCYVG----CESC 770
>gi|432101770|gb|ELK29759.1| Ribonucleoside-diphosphate reductase large subunit [Myotis davidii]
Length = 642
Score = 790 bits (2040), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/631 (60%), Positives = 466/631 (73%), Gaps = 59/631 (9%)
Query: 218 CFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLR 277
CFL+ MKDDSIEGIYDTLK+CA+ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLR
Sbjct: 31 CFLLSMKDDSIEGIYDTLKQCALISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLR 90
Query: 278 VFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDL 337
V+N+TARYVDQGG KR GAFA+YLEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDL
Sbjct: 91 VYNNTARYVDQGGNKRPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDL 150
Query: 338 FMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQ 397
FM+RV++N WSL CPNE PGL + WG EFE+LY YEK+G+ +KVV+AQ LW+ I++SQ
Sbjct: 151 FMKRVETNQDWSLMCPNECPGLDEVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQ 210
Query: 398 IETGTPYMLFKDTCN---KKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRY 454
ETGTPYML+KD+C TIK SNLCTE+++YTS E AVCNLAS+AL Y
Sbjct: 211 TETGTPYMLYKDSCTVXXXXXXXXXXXTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMY 270
Query: 455 VREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSN 514
V + +DF+KLAEVT +V NLNKIID+NYYP+ R+N
Sbjct: 271 V-------------------TTEHTYDFKKLAEVTKVVVRNLNKIIDINYYPIPEPIRAN 311
Query: 515 L----------------------------------RHRPIGIGVQGLADTFILLGMPFDS 540
+ RHRPIGIGVQGLAD FIL+ PF+S
Sbjct: 312 MCKLTQPRWRLICVYRLGVKTEDNIEGSEAYLSNKRHRPIGIGVQGLADAFILMRYPFES 371
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S ++A GPYETY GSPVSKGILQ DMW V P+D WDW
Sbjct: 372 PEAQLLNKQIFETIYYGALEASCDLAKEHGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 431
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 432 KLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 491
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE GLW+ +KN+II +GS+Q IP+IP++LK +YKTVWEI QKT+++MA +RG +
Sbjct: 492 LKDLTERGLWNEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTILNMAAERGAF 551
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR+R AA+ I+FT++ LK+
Sbjct: 552 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 611
Query: 781 KVTDDDDA---KMAQMVCSLTNREECMACGS 808
K + +++ A MVCSL NR+EC+ CGS
Sbjct: 612 KASKEEEEKERNTAAMVCSLENRDECLMCGS 642
>gi|20070048|ref|NP_613252.1| ribonucleotide reductase large subunit RR1 [Mamestra configurata
NPV-A]
gi|20043442|gb|AAM09277.1| ribonucleotide reductase large subunit RR1 [Mamestra configurata
NPV-A]
gi|33331880|gb|AAQ11188.1| putative ribonucletide reductase large subunit-like protein
[Mamestra configurata NPV-A]
Length = 761
Score = 787 bits (2032), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 382/774 (49%), Positives = 526/774 (67%), Gaps = 33/774 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDG+ E V K+ R+ +L + L+ + P VS KV + TT +D A
Sbjct: 1 MYVVKRDGRLEQVSPSKLHNRIHRLCHDLNSQFVHPRAVSLKVIKSLSDHTTTEDIDIYA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
A AA +T H DY LA R++V+N+HK +SF++ ++ ++ H L++D++
Sbjct: 61 ASVAATLTYKHYDYDMLAGRLLVTNMHKYVDESFTKVVQRLHKH---------NLVSDEL 111
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+ +K++ ++ I D DY+YFG++TL+ YL+K+ KV ER QHM MR+A+GI
Sbjct: 112 LLVTIKHSKIIEENIDMKLDLDYNYFGYQTLKNGYLIKINEKVAERIQHMHMRIALGIFG 171
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDID+AIK+Y +S + +THASPT+F AGTP Q+SSCFL+ M+ DSI GIY+TL +CA+
Sbjct: 172 DDIDNAIKSYKFLSTKMYTHASPTMFAAGTPTPQMSSCFLLTMESDSIRGIYNTLNDCAM 231
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK GGIG++V+++R S I+ TNGT++G++PMLRVFN+ R+V+QGG KRKGA AVY
Sbjct: 232 ISKHGGGIGLNVNSVRGRNSKIKSTNGTASGLLPMLRVFNNMVRHVNQGG-KRKGAQAVY 290
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWH DI + L +R+N G E+ +ARDL ALWVPD+FM RVQ NG WSL CPNE P L
Sbjct: 291 VEPWHCDIMDVLHMRRNIGSEDTKARDLMNALWVPDIFMRRVQENGRWSLMCPNECPELN 350
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ +G EFE Y YE +G+ + + A L I++ Q ETGTPYML+KD CN+KSNQ N
Sbjct: 351 NTFGDEFEYWYKHYEDKGQFRDQMPAVTLMRTIIEIQAETGTPYMLYKDACNRKSNQSNC 410
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G IK SNLC E++QY +P ETAVCNLASIA+ +Y+ N F
Sbjct: 411 GLIKCSNLCAEIVQYCAPDETAVCNLASIAVNKYI--------------------INGTF 450
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+ L V V +LNKIID N+YPVE A++SN+RHRPIGIG+QGLAD F++L +P+ S
Sbjct: 451 DFQLLHSVVKHVVISLNKIIDRNFYPVEAAKKSNMRHRPIGIGIQGLADAFVMLRIPYVS 510
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
A LNK I ET+Y+ AL S ++A+ PY T+ GS S+GILQ D+W P+ WDW
Sbjct: 511 DAAVLLNKQISETVYHAALDASLKLASDSEPYSTFAGSKASQGILQYDLWNAIPTSLWDW 570
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L+ I K+G+RNSLLVA MPTA+T+QIL NNE FEP+ SN++ RRVLSGEF VVN++L
Sbjct: 571 SQLKMNIQKHGLRNSLLVAYMPTATTAQILNNNESFEPFHSNLFLRRVLSGEFQVVNRYL 630
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEI---KQKTLVDMAVDR 717
+ DL + L++ ++ +I+ + GS+ I +IP+ +K +Y T+WE K ++DMA DR
Sbjct: 631 VDDLIALNLYTSSMRKRIMANRGSIASIDEIPDNIKKLYMTIWECWHNNGKFMIDMAADR 690
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTV 771
G +ID SQS N++M P K+ S+H + W RGLKTGMYY R+ AA++ +FTV
Sbjct: 691 GAFIDQSQSFNVYMADPTLAKMASVHMYGWQRGLKTGMYYFRTLPAANSQQFTV 744
>gi|269105097|ref|ZP_06157792.1| ribonucleotide reductase of class Ia (aerobic) alpha subunit
[Photobacterium damselae subsp. damselae CIP 102761]
gi|268160732|gb|EEZ39230.1| ribonucleotide reductase of class Ia (aerobic) alpha subunit
[Photobacterium damselae subsp. damselae CIP 102761]
Length = 647
Score = 784 bits (2025), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 371/668 (55%), Positives = 487/668 (72%), Gaps = 33/668 (4%)
Query: 25 LSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVS 84
L+ GL +E P+ V+Q+V +G+Y G+ +++D AETAA++ T HPDYA LAAR++VS
Sbjct: 2 LADGLKVE---PIAVAQRVVSGLYDGIKVTEIDVFLAETAASLATEHPDYAKLAARVMVS 58
Query: 85 NLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYD 144
+L K T + T R + +++ D + KN L+ I Y RD+ +D
Sbjct: 59 SLQKETSGYATAT----------RELSEIGILSSAYVDFVAKNQFALEDMIDYKRDYQFD 108
Query: 145 YFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPT 204
YFG+KTLERSYLLKV+G VVERPQ M MRVAV + DD++ + Y ++S ++THA+PT
Sbjct: 109 YFGYKTLERSYLLKVKGVVVERPQDMFMRVAVAVAGDDLEEIRELYDLLSLCYYTHATPT 168
Query: 205 LFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRG 264
LFNAG QLSSCFL+ M++DSI GIYDTLK+CA+ISKSAGGIG+ +HNIRATG+ I G
Sbjct: 169 LFNAGCKMQQLSSCFLLAMQEDSINGIYDTLKDCALISKSAGGIGLHIHNIRATGAPIIG 228
Query: 265 TNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHR 324
TNG SNGIVPML+VFN+TARYVDQGGGKRKG+FAVYLEPWHADI FLDLRKNHGKEE R
Sbjct: 229 TNGVSNGIVPMLKVFNETARYVDQGGGKRKGSFAVYLEPWHADIESFLDLRKNHGKEEFR 288
Query: 325 ARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVV 384
ARDLF ALWVPDLFMERV+++ W+LF P+ GL+D +G EF + Y +YE+ G K +
Sbjct: 289 ARDLFLALWVPDLFMERVETDAEWTLFSPHNTKGLSDLYGAEFTQKYQEYERMGLGVKTI 348
Query: 385 QAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVC 444
+A+ L +I++SQ ETGTPYML+KD CN+KSNQ+NLGTIKSSNLC E+++ ++P ETA C
Sbjct: 349 KARQLMTQIIESQAETGTPYMLYKDACNEKSNQKNLGTIKSSNLCAEIMEVSTPDETAAC 408
Query: 445 NLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNY 504
NLAS+ALP++V G FDF+KL +VT + +NL+++IDVNY
Sbjct: 409 NLASLALPKFVTNTG--------------------FDFDKLHQVTKVAIKNLDRVIDVNY 448
Query: 505 YPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSE 564
+P + +SN HRP+G+G+QGLAD F + +PFDS EA LN+DI ET+Y+ +L S E
Sbjct: 449 HPTDKIEKSNHAHRPVGLGIQGLADVFFKMHLPFDSEEALLLNRDIAETMYHASLEASCE 508
Query: 565 IAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTA 624
IA ++G Y +Y GSP+S G Q D+W PS RWDW L+ I+++GVRNSLL+A MPTA
Sbjct: 509 IAKQKGTYSSYDGSPISHGQFQFDLWCEQPSSRWDWSQLKHQIAEHGVRNSLLIAQMPTA 568
Query: 625 STSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGS 684
ST+QILGNNE FE TSNIY R+ LSGEF+++NK+L+ DL + GLW+ I++ II ++GS
Sbjct: 569 STAQILGNNEAFEAQTSNIYKRQTLSGEFIIINKYLVSDLEQRGLWTSKIRDAIILNNGS 628
Query: 685 VQKIPQIP 692
VQ I IP
Sbjct: 629 VQGIDAIP 636
>gi|300707604|ref|XP_002996003.1| hypothetical protein NCER_100976 [Nosema ceranae BRL01]
gi|239605258|gb|EEQ82332.1| hypothetical protein NCER_100976 [Nosema ceranae BRL01]
Length = 800
Score = 780 bits (2014), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 364/740 (49%), Positives = 515/740 (69%), Gaps = 29/740 (3%)
Query: 42 KVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDM 101
K+ +G+ +T + AAETA +MTT H DY +A+I++ L +NT SF + +
Sbjct: 66 KIESGLCDDITVEEFISFAAETADSMTTKHYDYGRFSAKILMEYLKENTLDSFFAKVDYI 125
Query: 102 YNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQG 161
Y + ++ Y+I++ N LD + Y +D + YF TL+R+YLL + G
Sbjct: 126 YKN--------GDFYSEKFYNIVLDNKKFLDELVDYSKDDSWTYFAILTLKRAYLLTLDG 177
Query: 162 KVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLV 221
+ +ERPQ ML+RVAV +H D++++ +TY ++S +TH SPT+FN+G+ ++QL+SCFL+
Sbjct: 178 QTIERPQDMLLRVAVQLHGDNLENVKETYELLSNNMYTHGSPTIFNSGSKKSQLASCFLL 237
Query: 222 CMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFND 281
++++EG+++T+K C ISKS GG+ + +H++ A G+ IR T G S GI+P ++V N
Sbjct: 238 TPIEETVEGLFETVKRCVQISKSGGGVALDLHDMAAKGTSIRKTGGISKGIIPYIQVLNW 297
Query: 282 TARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMER 341
+ +Y+ Q G +R G A+YLEPWH DIF+FLDLRK+ GK+E RARD+F +W+ DLFM+R
Sbjct: 298 SLKYIGQAGSRRSGCPAIYLEPWHKDIFDFLDLRKSIGKDELRARDVFTGMWINDLFMKR 357
Query: 342 VQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETG 401
V++N WSLFCP PGL++ +G EFE +Y +YEK+ VV AQ +W I++SQIETG
Sbjct: 358 VEANEDWSLFCPKSVPGLSNAYGKEFEDMYLEYEKKVDCV-VVPAQKVWKAIIESQIETG 416
Query: 402 TPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVP 461
TPYML+KDT N SNQ+N+GTI+ SNLCTE++QYTSP E AVCNLASI LP++V
Sbjct: 417 TPYMLYKDTINNLSNQKNIGTIRCSNLCTEIVQYTSPDEVAVCNLASICLPKFVI----- 471
Query: 462 MESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIG 521
N FDF V IVT+N N +ID N+YP++ A +SN +HRPIG
Sbjct: 472 ---------------NGEFDFNLFKSVVKIVTKNANIVIDCNFYPLKEAEKSNKKHRPIG 516
Query: 522 IGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVS 581
+GVQGLAD F++L +P++S A++LNK+IFET+Y+ AL +S E A + GPYE+Y+GSP+S
Sbjct: 517 LGVQGLADVFLMLRLPYESEGARKLNKEIFETLYFGALESSCEEAEKYGPYESYNGSPIS 576
Query: 582 KGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTS 641
KGI +M + + RW+W LR I K GVRNSLL+APMPTA TSQI NNE FEP+TS
Sbjct: 577 KGIFHWEMANSSTTGRWNWEELRKKILKYGVRNSLLIAPMPTAGTSQIFNNNEAFEPFTS 636
Query: 642 NIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKT 701
NIY+RR GEF +VN++L++DL ++ +WSP IKN I+ +GS+Q I IPEE+K +YKT
Sbjct: 637 NIYTRRTACGEFQMVNRYLMNDLIKLNMWSPEIKNYIVEQEGSIQNISGIPEEIKELYKT 696
Query: 702 VWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSR 761
VWEIK K ++D+A DR ++D +QSLN+ + +P + L+S+HF+ W RGLKTGMYYLR+R
Sbjct: 697 VWEIKMKCVIDLAADRQAFVDQTQSLNLFVAKPTYPILSSMHFYGWKRGLKTGMYYLRTR 756
Query: 762 AAADAIKFTVDTSVLKENPK 781
AIKFTVD +LK+ K
Sbjct: 757 PITSAIKFTVDLDMLKKVEK 776
>gi|448931980|gb|AGE55540.1| ribonucleotide reductase large subunit [Acanthocystis turfacea
Chlorella virus MN0810.1]
Length = 763
Score = 778 bits (2008), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/782 (49%), Positives = 517/782 (66%), Gaps = 45/782 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIE-----------HCDPVLVSQKVCTGVYK 49
M VVKRDG EAV FDKI R+ +L + + + D + +C+ V
Sbjct: 7 MNVVKRDGSSEAVSFDKIMTRIGRLCWAENAKPSHSGRVQNGLEVDISRIVASICSSVVD 66
Query: 50 GVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERS 109
+TT QLD+L A+ AA+M T HPDY LAARI VSNLHK T S ET M
Sbjct: 67 NITTVQLDDLTADKAASMVTTHPDYGILAARIAVSNLHKQTSDSVLETYAKM-------- 118
Query: 110 GLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQH 169
+ +++D+ ++ N S + YDRD+D+DYFGF T++R YL KV GKV ERPQH
Sbjct: 119 ---SSMLSDEFLQVVRNNEQAFQSLVNYDRDYDFDYFGFSTMKRLYLTKVDGKVTERPQH 175
Query: 170 MLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIE 229
+RVA+ + +DI +TY +S+R FTHASPTLFNAG A L+SCFLV + DDS+
Sbjct: 176 TYLRVAIALWGEDIAKVKETYDALSKRKFTHASPTLFNAGFKNANLASCFLVHV-DDSLT 234
Query: 230 GIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQG 289
I+ +L + A +SK GGIG+ + +IR GS I+GTNG S+GIVPML+V++ T+ Y +QG
Sbjct: 235 NIFKSLGDVAQLSKFGGGIGLHMSDIRGRGSKIQGTNGESDGIVPMLKVYDTTSAYANQG 294
Query: 290 GGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWS 349
G +RKG+FAVYLEP H DI +FL LR+N G+E RAR+LFYA+W+ DLFM+RV+++ WS
Sbjct: 295 G-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEETQRARNLFYAMWLNDLFMKRVETDAQWS 353
Query: 350 LFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKD 409
LF P E PGL D +G E+E LYTKYE EG+AKKVV+A+++W ++ +QIETG PY+L KD
Sbjct: 354 LFDPKECPGLTDAFGKEYEELYTKYETEGRAKKVVKARDVWNAMIITQIETGMPYVLNKD 413
Query: 410 TCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKL 469
+ N K+ Q N GTIK SNLC E+++YTS E AVC + SI L YV
Sbjct: 414 SVNAKNMQSNAGTIKGSNLCAEIVEYTSTDEAAVCVIGSIVLQNYV-------------- 459
Query: 470 VGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
KN +DFE L + I+ +NL+K IDV Y + AR SNLR RPIG+GVQGL D
Sbjct: 460 ------KNGAYDFEDLRKHVKILAKNLDKSIDVMSYAIPEARTSNLRRRPIGVGVQGLQD 513
Query: 530 TFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDM 589
F L +PFDS A+ LN++IFE IY+ A+ S E+A GP+ T+ GSP S+G++Q +
Sbjct: 514 VFFKLRLPFDSDAARNLNREIFENIYFAAVEASCELADEHGPHPTFEGSPASRGVMQYHL 573
Query: 590 WGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL 649
W P DW GL + + K GVRNSL A MPTAST+QI G+ E EP TSN+YSRR L
Sbjct: 574 WNSEPVTSLDWKGLEERV-KKGVRNSLTTALMPTASTAQICGSVEAMEPITSNLYSRRTL 632
Query: 650 SGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKT 709
+GEF VVN +L+ DL G WS +KN+II + GS+Q++ I ELKA+YKT WE+ KT
Sbjct: 633 AGEFPVVNSYLVRDLIARGTWSEAMKNQIIANGGSIQRVIGIHPELKAVYKTAWELSMKT 692
Query: 710 LVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKF 769
++D+A DRG ++D +QS+N+ + P+ +TS+ F+AW +GLKT YYLRS+ AA+AI
Sbjct: 693 VIDLAADRGPFVDQTQSMNLFVAAPSMKTMTSMLFYAWKKGLKTLQYYLRSKPAANAIAV 752
Query: 770 TV 771
TV
Sbjct: 753 TV 754
>gi|448926493|gb|AGE50069.1| ribonucleotide reductase large subunit [Acanthocystis turfacea
Chlorella virus Canal-1]
Length = 763
Score = 776 bits (2005), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/785 (49%), Positives = 520/785 (66%), Gaps = 51/785 (6%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSY--------------GLSIEHCDPVLVSQKVCTG 46
M V+KRDG EAV FDKI R+ +L + GL + D + +C+
Sbjct: 7 MTVIKRDGSSEAVSFDKIMTRIGRLCWPENAKPSHSGRVQNGLEV---DISRIVASICSS 63
Query: 47 VYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYN 106
V +TT QLD+L A+ AA+M TNHPDY LAARI +SNLHK T S S+T M
Sbjct: 64 VVDNITTVQLDDLTADKAASMVTNHPDYGILAARISISNLHKQTSDSVSDTYARM----- 118
Query: 107 ERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVER 166
+ +++D+ I+ N S + YDRD+D+DYFGF T++R YL KV GKVVER
Sbjct: 119 ------SSMLSDEFMQIVHDNEHAFQSLVNYDRDYDFDYFGFSTMKRLYLTKVDGKVVER 172
Query: 167 PQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDD 226
PQH +RVA+ + DI+ +TY +S+R FTHASPTLFNAG A L+SCFLV + DD
Sbjct: 173 PQHTYLRVAIALWGGDIEKVKETYDALSRRKFTHASPTLFNAGFKNANLASCFLVHV-DD 231
Query: 227 SIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYV 286
S+ I+ +L + A +SK GGIG+ + +IR GS I+GTNG S+GIVPML+V++ T+ Y
Sbjct: 232 SLSNIFKSLGDVAQLSKFGGGIGLHMSDIRGRGSRIQGTNGESDGIVPMLKVYDTTSAYA 291
Query: 287 DQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNG 346
+QGG +RKG+FAVYLEP H DI +FL LR+N G+E RAR+LFYA+W+ DLFM+RV+++
Sbjct: 292 NQGG-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEETQRARNLFYAMWLNDLFMKRVETDA 350
Query: 347 LWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYML 406
WSLF P E PGL D +G E+E LY +YE EG+AKK+V+A+++W ++ +QIETG PY+L
Sbjct: 351 AWSLFDPKECPGLTDAFGKEYEELYARYETEGRAKKIVKARDVWNAMIVTQIETGMPYVL 410
Query: 407 FKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHP 466
KD+ N K+ Q N GTIK SNLC E+++YTS E AVC + SI L YV
Sbjct: 411 NKDSVNAKNMQSNAGTIKGSNLCAEIVEYTSTDEAAVCVIGSIVLQNYV----------- 459
Query: 467 SKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQG 526
KN +DFE L + + +NL++ IDV Y + AR SNLR RPIG+GVQG
Sbjct: 460 ---------KNGVYDFEDLRKHVKTLAKNLDRSIDVMSYAIPEARTSNLRRRPIGVGVQG 510
Query: 527 LADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQ 586
L D F L +PFDS A+ LN++IFE IY+ A+ S E+A GP+ T+ GSP S+G++Q
Sbjct: 511 LQDVFFKLRLPFDSDAARNLNREIFEHIYFAAVEASCELADEHGPHPTFEGSPASRGVMQ 570
Query: 587 PDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSR 646
+WG P DW GL + + K GVRNSL A MPTAST+QI G+ E EP TSN+YSR
Sbjct: 571 YHLWGTEPVTHLDWKGLEERV-KKGVRNSLTTALMPTASTAQICGSVEAMEPITSNLYSR 629
Query: 647 RVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIK 706
R L+GEF VVN +L+ DL G WS +KN+II + GS+Q++ I ELKAIYKT WE+
Sbjct: 630 RTLAGEFPVVNNYLVRDLIARGTWSEAMKNQIIANGGSIQRVIGIHPELKAIYKTAWELS 689
Query: 707 QKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADA 766
KT++D+A DRG ++D +QS+N+ + P+ LTS+ F+AW +GLKT YYLRS+ AA+A
Sbjct: 690 MKTVIDLAADRGPFVDQTQSMNLFVAAPSMKSLTSMLFYAWKKGLKTLQYYLRSKPAANA 749
Query: 767 IKFTV 771
I T+
Sbjct: 750 IAVTI 754
>gi|448925806|gb|AGE49384.1| ribonucleotide reductase large subunit [Acanthocystis turfacea
Chlorella virus Can0610SP]
Length = 763
Score = 776 bits (2004), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/787 (49%), Positives = 521/787 (66%), Gaps = 45/787 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIE-----------HCDPVLVSQKVCTGVYK 49
M V+KRDG EAV FDKI R+ +L + + + D + +C+ V
Sbjct: 7 MNVIKRDGSSEAVSFDKIMTRIGRLCWAENAKPNHSGRVQNGLEVDISRIVASICSSVVD 66
Query: 50 GVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERS 109
+TT QLD+L A+ AA+M TNHPDY LAARI VSNLHK + S +T M
Sbjct: 67 NITTVQLDDLTADKAASMVTNHPDYGILAARIAVSNLHKQSSDSVVDTYTKM-------- 118
Query: 110 GLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQH 169
+ +++D+ ++ + + + YDRD+D+DYFGF T++R YL KV GKVVERPQH
Sbjct: 119 ---SSMLSDEFMQVVRAHEQEFQTLVKYDRDYDFDYFGFSTMKRLYLTKVDGKVVERPQH 175
Query: 170 MLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIE 229
+RVA+ + +DI +TY +S+R FTHASPTLFNAG A L+SCFLV + DDS+
Sbjct: 176 TYLRVAIALWGEDIAKVKETYDALSKRKFTHASPTLFNAGFRNANLASCFLVHV-DDSLT 234
Query: 230 GIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQG 289
I+ +L + A +SK GGIG+ + +IR GS I+GTNG S+GIVPML+V++ T+ Y +QG
Sbjct: 235 NIFKSLGDVAQLSKFGGGIGLHLSDIRGRGSKIQGTNGESDGIVPMLKVYDTTSAYANQG 294
Query: 290 GGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWS 349
G +RKG+FAVYLEP H DI +FL LR+N G+E RAR+LFYA+W+ DLFM+RV+++ WS
Sbjct: 295 G-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEETQRARNLFYAMWLNDLFMKRVEADVAWS 353
Query: 350 LFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKD 409
LF P E PGL D +G E+E LY +YE EG+AKKVV+A+++W ++ +QIETG PY+L KD
Sbjct: 354 LFDPKECPGLTDAFGKEYEDLYLRYESEGRAKKVVKARDVWNAMIITQIETGMPYVLNKD 413
Query: 410 TCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKL 469
+ N K+ Q N GTIK SNLC E+++YTS ETAVC + SI L YV
Sbjct: 414 SVNVKNMQSNAGTIKGSNLCAEIVEYTSTDETAVCVIGSIVLQNYV-------------- 459
Query: 470 VGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
KN +DFE L + I+ +NL+K IDV Y + A+ SN+R RPIG+GVQGL D
Sbjct: 460 ------KNGAYDFEDLRKHVKILAKNLDKSIDVMSYAIPEAKTSNMRRRPIGVGVQGLQD 513
Query: 530 TFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDM 589
F L MPFDS A+ LN++IFE IY+ A+ S E+A GP+ T+ GSP S+G++Q +
Sbjct: 514 VFFKLRMPFDSDAAKNLNREIFENIYFAAVEASCELAEEHGPHPTFEGSPASRGVMQYHL 573
Query: 590 WGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL 649
WG P R DW L + + K GVRNSL A MPTAST+QI G+ E EP TSN+YSRR L
Sbjct: 574 WGTEPVTRLDWKTLEERV-KKGVRNSLTTALMPTASTAQICGSVEAMEPITSNLYSRRTL 632
Query: 650 SGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKT 709
+GEF VVN +L+ DL G WS +KN+II + GSVQ++ I ELKAIYKT WE+ KT
Sbjct: 633 AGEFPVVNNYLVRDLIARGTWSEAMKNQIIANGGSVQRVIGIHPELKAIYKTAWELSMKT 692
Query: 710 LVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKF 769
++D+A DRG ++D +QS+N+ + P+ +TS+ F+AW +GLKT MYY RS+ AA+AI
Sbjct: 693 VIDLAADRGPFVDQTQSMNLFVAAPSMKSMTSMLFYAWKKGLKTLMYYCRSKPAANAIAV 752
Query: 770 TVDTSVL 776
TV L
Sbjct: 753 TVGEECL 759
>gi|448932971|gb|AGE56528.1| ribonucleotide reductase large subunit [Acanthocystis turfacea
Chlorella virus NE-JV-2]
Length = 763
Score = 775 bits (2002), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/787 (49%), Positives = 521/787 (66%), Gaps = 45/787 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIE-----------HCDPVLVSQKVCTGVYK 49
M V+KRDG EAV FDKI R+ +L + + + D + +C+ V
Sbjct: 7 MNVIKRDGSSEAVSFDKIMTRIGRLCWAENAKPNHSGRVQNGLEVDISRIVASICSSVVD 66
Query: 50 GVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERS 109
+TT QLD+L A+ AA+M TNHPDY LAARI VSNLHK + S +T M
Sbjct: 67 NITTVQLDDLTADKAASMVTNHPDYGILAARIAVSNLHKQSSDSVVDTYTKM-------- 118
Query: 110 GLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQH 169
+ +++D+ ++ + + + YDRD+D+DYFGF T++R YL KV GKVVERPQH
Sbjct: 119 ---SSMLSDEFMQVVRAHEQEFQALVKYDRDYDFDYFGFSTMKRLYLTKVDGKVVERPQH 175
Query: 170 MLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIE 229
+RVA+ + +DI +TY +S+R FTHASPTLFNAG A L+SCFLV + DDS+
Sbjct: 176 TYLRVAIALWGEDIAKVKETYDALSKRKFTHASPTLFNAGFRNANLASCFLVHV-DDSLT 234
Query: 230 GIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQG 289
I+ +L + A +SK GGIG+ + +IR GS I+GTNG S+GIVPML+V++ T+ Y +QG
Sbjct: 235 NIFKSLGDVAQLSKFGGGIGLHLSDIRGRGSKIQGTNGESDGIVPMLKVYDTTSAYANQG 294
Query: 290 GGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWS 349
G +RKG+FAVYLEP H DI +FL LR+N G+E RAR+LFYA+W+ DLFM+RV+++ WS
Sbjct: 295 G-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEETQRARNLFYAMWLNDLFMKRVEADVAWS 353
Query: 350 LFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKD 409
LF P E PGL D +G E+E LY +YE EG+AKKVV+A+++W ++ +QIETG PY+L KD
Sbjct: 354 LFDPKECPGLTDAFGKEYEDLYLRYESEGRAKKVVKARDVWNAMIITQIETGMPYVLNKD 413
Query: 410 TCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKL 469
+ N K+ Q N GTIK SNLC E+++YTS ETAVC + SI L YV
Sbjct: 414 SVNVKNMQSNAGTIKGSNLCAEIVEYTSTDETAVCVIGSIVLQNYV-------------- 459
Query: 470 VGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
KN +DFE L + I+ +NL+K IDV Y + A+ SN+R RPIG+GVQGL D
Sbjct: 460 ------KNGAYDFEDLRKHVKILAKNLDKSIDVMSYAIPEAKTSNMRRRPIGVGVQGLQD 513
Query: 530 TFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDM 589
F L MPFDS A+ LN++IFE IY+ A+ S E+A GP+ T+ GSP S+G++Q +
Sbjct: 514 VFFKLRMPFDSDAAKNLNREIFENIYFAAVEASCELAEEHGPHPTFEGSPASRGVMQYHL 573
Query: 590 WGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL 649
WG P R DW L + + K GVRNSL A MPTAST+QI G+ E EP TSN+YSRR L
Sbjct: 574 WGTEPVTRLDWKTLEERV-KKGVRNSLTTALMPTASTAQICGSVEAMEPITSNLYSRRTL 632
Query: 650 SGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKT 709
+GEF VVN +L+ DL G WS +KN+II + GSVQ++ I ELKAIYKT WE+ KT
Sbjct: 633 AGEFPVVNNYLVRDLIARGTWSEAMKNQIIANGGSVQRVIGIHPELKAIYKTAWELSMKT 692
Query: 710 LVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKF 769
++D+A DRG ++D +QS+N+ + P+ ++S+ F+AW +GLKT MYY RS+ AA+AI
Sbjct: 693 VIDLAADRGPFVDQTQSMNLFVAAPSMKSMSSMLFYAWKKGLKTLMYYCRSKPAANAIAV 752
Query: 770 TVDTSVL 776
TV L
Sbjct: 753 TVGEECL 759
>gi|448932314|gb|AGE55873.1| ribonucleotide reductase large subunit [Acanthocystis turfacea
Chlorella virus MO0605SPH]
gi|448936443|gb|AGE59990.1| ribonucleotide reductase large subunit [Acanthocystis turfacea
Chlorella virus WI0606]
Length = 763
Score = 775 bits (2000), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/787 (48%), Positives = 521/787 (66%), Gaps = 45/787 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIE-----------HCDPVLVSQKVCTGVYK 49
M V+KRDG EAV FDKI R+ +L + + + D + +C+ V
Sbjct: 7 MNVIKRDGSSEAVSFDKIMTRIGRLCWAENAKPNHSGRVQNGLEVDISRIVASICSSVVD 66
Query: 50 GVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERS 109
+TT QLD+L A+ AA+M TNHPDY LAARI VSNLHK + S +T M
Sbjct: 67 NITTVQLDDLTADKAASMVTNHPDYGILAARIAVSNLHKQSSDSVVDTYTKM-------- 118
Query: 110 GLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQH 169
+ +++D+ ++ + + + YDRD+D+DYFGF T++R YL KV GKVVERPQH
Sbjct: 119 ---SSMLSDEFMQVVRAHEQEFQALVKYDRDYDFDYFGFSTMKRLYLTKVDGKVVERPQH 175
Query: 170 MLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIE 229
+RVA+ + +D +TY +S+R FTHASPTLFNAG A L+SCFLV + DDS+
Sbjct: 176 TYLRVAIALWGEDTAKVKETYDALSKRKFTHASPTLFNAGFRNANLASCFLVHV-DDSLT 234
Query: 230 GIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQG 289
I+ +L + A +SK GGIG+ + +IR GS I+GTNG S+GIVPML+V++ T+ Y +QG
Sbjct: 235 NIFKSLGDVAQLSKFGGGIGLHLSDIRGRGSKIQGTNGESDGIVPMLKVYDTTSAYANQG 294
Query: 290 GGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWS 349
G +RKG+FAVYLEP H DI +FL LR+N G+E RAR+LFYA+W+ DLFM+RV+++ WS
Sbjct: 295 G-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEETQRARNLFYAMWLNDLFMKRVEADVAWS 353
Query: 350 LFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKD 409
LF P E PGL D +G E+E LY +YE EG+AKKVV+A+++W ++ +QIETG PY+L KD
Sbjct: 354 LFDPKECPGLTDAFGKEYEDLYLRYESEGRAKKVVKARDVWNAMIITQIETGMPYVLNKD 413
Query: 410 TCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKL 469
+ N K+ Q N GTIK SNLC E+++YTS ETAVC + SI L YV
Sbjct: 414 SVNVKNMQSNAGTIKGSNLCAEIVEYTSTDETAVCVIGSIVLQNYV-------------- 459
Query: 470 VGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
KN +DFE L + I+T+NL+K IDV Y + A+ SN+R RPIG+GVQGL D
Sbjct: 460 ------KNGAYDFEDLRKHVKILTKNLDKSIDVMSYAIPEAKTSNMRRRPIGVGVQGLQD 513
Query: 530 TFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDM 589
F L MPFDS A+ LN++IFE IY+ A+ S E+A GP+ T+ GSP S+G++Q +
Sbjct: 514 VFFKLRMPFDSDAAKNLNREIFENIYFAAVEASCELAEEHGPHPTFEGSPASRGVMQYHL 573
Query: 590 WGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL 649
WG P R DW L + + K GVRNSL A MPTAST+QI G+ E EP TSN+YSRR L
Sbjct: 574 WGTEPVTRLDWKTLEERV-KKGVRNSLTTALMPTASTAQICGSVEAMEPITSNLYSRRTL 632
Query: 650 SGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKT 709
+GEF VVN +L+ DL G WS +KN+II + GS+Q++ I ELKAIYKT WE+ KT
Sbjct: 633 AGEFPVVNNYLVRDLIARGTWSEAMKNQIIANGGSIQRVIGIHPELKAIYKTAWELSMKT 692
Query: 710 LVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKF 769
++D+A DRG ++D +QS+N+ + P+ ++S+ F+AW +GLKT MYY RS+ AA+AI
Sbjct: 693 VIDLAADRGPFVDQTQSMNLFVAAPSMKSMSSMLFYAWKKGLKTLMYYCRSKPAANAIAV 752
Query: 770 TVDTSVL 776
TV L
Sbjct: 753 TVGEECL 759
>gi|448935771|gb|AGE59320.1| ribonucleotide reductase large subunit [Acanthocystis turfacea
Chlorella virus OR0704.3]
Length = 763
Score = 774 bits (1999), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/787 (49%), Positives = 521/787 (66%), Gaps = 45/787 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIE-----------HCDPVLVSQKVCTGVYK 49
M V+KRDG EAV FDKI R+ +L + + + D + +C+ V
Sbjct: 7 MNVIKRDGSSEAVSFDKIMTRIGRLCWAENAKPNHSGRVQNGLEVDISRIVASICSSVVD 66
Query: 50 GVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERS 109
+TT QLD+L A+ AA+M TNHPDY LAARI VSNLHK + S +T M
Sbjct: 67 NITTVQLDDLTADKAASMVTNHPDYGILAARIAVSNLHKQSSDSVVDTYTKM-------- 118
Query: 110 GLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQH 169
+ +++D+ ++ + + + YDRD+D+DYFGF T++R YL KV GKVVERPQH
Sbjct: 119 ---SSMLSDEFMQVVRVHEQEFQALVKYDRDYDFDYFGFSTMKRLYLTKVDGKVVERPQH 175
Query: 170 MLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIE 229
+RVA+ + +DI +TY +S+R FTHASPTLFNAG A L+SCFLV + DDS+
Sbjct: 176 TYLRVAIALWGEDIAKVKETYDALSKRKFTHASPTLFNAGFRNANLASCFLVHV-DDSLT 234
Query: 230 GIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQG 289
I+ +L + A +SK GGIG+ + +IR GS I+GTNG S+GIVPML+V++ T+ Y +QG
Sbjct: 235 NIFKSLGDVAQLSKFGGGIGLHLSDIRGRGSKIQGTNGESDGIVPMLKVYDTTSAYANQG 294
Query: 290 GGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWS 349
G +RKG+FAVYLEP H DI +FL LR+N G+E RAR+LFYA+W+ DLFM+RV+++ WS
Sbjct: 295 G-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEETQRARNLFYAMWLNDLFMKRVEADVAWS 353
Query: 350 LFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKD 409
LF P E PGL D +G E+E LY +YE EG+AKKVV+A+++W ++ +QIETG PY+L KD
Sbjct: 354 LFDPKECPGLTDAFGKEYEDLYLRYESEGRAKKVVKARDVWNAMIITQIETGMPYVLNKD 413
Query: 410 TCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKL 469
+ N K+ Q N GTIK SNLC E+++YTS ETAVC + SI L YV
Sbjct: 414 SVNVKNMQSNAGTIKGSNLCAEIVEYTSTDETAVCVIGSIVLQNYV-------------- 459
Query: 470 VGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
KN +DFE L + I+ +NL+K IDV Y + A+ SN+R RPIG+GVQGL D
Sbjct: 460 ------KNGAYDFEDLRKHVKILAKNLDKSIDVMSYAIPEAKTSNMRRRPIGVGVQGLQD 513
Query: 530 TFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDM 589
F L MPFDS A+ LN++IFE IY+ A+ S E+A GP+ T+ GSP S+G++Q +
Sbjct: 514 VFFKLRMPFDSDAAKNLNREIFENIYFAAVEASCELAEEHGPHPTFEGSPASRGVMQYHL 573
Query: 590 WGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL 649
WG P R DW L + + K GVRNSL A MPTAST+QI G+ E EP TSN+YSRR L
Sbjct: 574 WGTEPVTRLDWKTLEERV-KKGVRNSLTTALMPTASTAQICGSVEAMEPITSNLYSRRTL 632
Query: 650 SGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKT 709
+GEF VVN +L+ DL G WS +KN+II + GS+Q++ I ELKAIYKT WE+ KT
Sbjct: 633 AGEFPVVNNYLVRDLIARGTWSEAMKNQIIANGGSIQRVIGIHPELKAIYKTAWELSMKT 692
Query: 710 LVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKF 769
++D+A DRG ++D +QS+N+ + P+ +TS+ F+AW +GLKT MYY RS+ AA+AI
Sbjct: 693 VIDLAADRGPFVDQTQSMNLFVAAPSMKSMTSMLFYAWKKGLKTLMYYCRSKPAANAIAV 752
Query: 770 TVDTSVL 776
TV L
Sbjct: 753 TVGEECL 759
>gi|448933310|gb|AGE56866.1| ribonucleotide reductase large subunit [Acanthocystis turfacea
Chlorella virus NE-JV-3]
Length = 763
Score = 773 bits (1997), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/787 (48%), Positives = 520/787 (66%), Gaps = 45/787 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIE-----------HCDPVLVSQKVCTGVYK 49
M V+KRDG EAV FDKI R+ +L + + + D + +C+ V
Sbjct: 7 MNVIKRDGSSEAVSFDKIMTRIGRLCWAENAKPNHSGRVQNGLEVDISRIVASICSSVVD 66
Query: 50 GVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERS 109
+TT QLD+L A+ AA+M TNHPDY LAARI VSNLHK + S +T M
Sbjct: 67 NITTVQLDDLTADKAASMVTNHPDYGILAARIAVSNLHKQSSDSVVDTYTKM-------- 118
Query: 110 GLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQH 169
+ +++D+ ++ + + + YDRD+D+DYFGF T+ R YL KV GKVVERPQH
Sbjct: 119 ---SSMLSDEFMQVVRAHEQEFQALVKYDRDYDFDYFGFSTMRRLYLTKVDGKVVERPQH 175
Query: 170 MLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIE 229
+RVA+ + +DI +TY +S+R FTHASPTLFNAG A L+SCFLV + DDS+
Sbjct: 176 TYLRVAIALWGEDIAKVKETYDALSKRKFTHASPTLFNAGFRNANLASCFLVHV-DDSLT 234
Query: 230 GIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQG 289
I+ +L + A +SK GGIG+ + +IR GS I+GTNG S+GIVPML+V++ T+ Y +QG
Sbjct: 235 NIFKSLGDVAQLSKFGGGIGLHLSDIRGRGSKIQGTNGESDGIVPMLKVYDTTSAYANQG 294
Query: 290 GGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWS 349
G +RKG+FAVYLEP H DI +FL LR+N G+E RAR+LFYA+W+ DLFM+RV+++ WS
Sbjct: 295 G-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEETQRARNLFYAMWLNDLFMKRVEADVAWS 353
Query: 350 LFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKD 409
LF P E PGL D +G E+E LY +YE EG+AKKVV+A+++W ++ +QIETG PY+L KD
Sbjct: 354 LFDPKECPGLTDAFGKEYEDLYLRYESEGRAKKVVKARDVWNAMIITQIETGMPYVLNKD 413
Query: 410 TCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKL 469
+ N K+ Q N GTIK SNLC E+++YTS ETAVC + SI L YV
Sbjct: 414 SVNVKNMQSNAGTIKGSNLCAEIVEYTSTDETAVCVIGSIVLQNYV-------------- 459
Query: 470 VGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
KN +DFE L + I+ +NL+K IDV Y + A+ SN+R RPIG+GVQGL D
Sbjct: 460 ------KNGAYDFEDLRKHVKILAKNLDKSIDVMSYAIPEAKTSNMRRRPIGVGVQGLQD 513
Query: 530 TFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDM 589
F L MPFDS A+ LN++IFE IY+ A+ S E+A GP+ T+ GSP S+G++Q +
Sbjct: 514 VFFKLRMPFDSDAAKNLNREIFENIYFAAVEASCELAEEHGPHPTFEGSPASRGVMQYHL 573
Query: 590 WGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL 649
WG P R DW L + + K GVRNSL A MPTAST+QI G+ E EP TSN+YSRR L
Sbjct: 574 WGTEPVTRLDWKTLEERV-KKGVRNSLTTALMPTASTAQICGSVEAMEPITSNLYSRRTL 632
Query: 650 SGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKT 709
+GEF VVN +L+ DL G WS +KN+II + GS+Q++ I ELKAIYKT WE+ KT
Sbjct: 633 AGEFPVVNNYLVRDLIARGTWSEAMKNQIIANGGSIQRVIGIHPELKAIYKTAWELSMKT 692
Query: 710 LVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKF 769
++D+A DRG ++D +QS+N+ + P+ ++S+ F+AW +GLKT MYY RS+ AA+AI
Sbjct: 693 VIDLAADRGPFVDQTQSMNLFVAAPSMKSMSSMLFYAWKKGLKTLMYYCRSKPAANAIAV 752
Query: 770 TVDTSVL 776
TV L
Sbjct: 753 TVGEECL 759
>gi|17158276|ref|NP_477694.1| wsv172 [Shrimp white spot syndrome virus]
gi|6165659|gb|AAF04636.1|AF099142_4 large subunit of ribonucleotide reductase [shrimp white spot
syndrome virus]
gi|15021484|gb|AAK77761.1|AF369029_92 ORF92, putative ribonucleotide reductase large subunit (RR1)
[shrimp white spot syndrome virus]
gi|17016570|gb|AAL33176.1| wsv172 [shrimp white spot syndrome virus]
gi|19481820|gb|AAL89096.1| WSSV228 [shrimp white spot syndrome virus]
gi|417072401|gb|AFX59550.1| wsv172 [White spot syndrome virus]
Length = 848
Score = 773 bits (1995), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 394/854 (46%), Positives = 552/854 (64%), Gaps = 61/854 (7%)
Query: 2 YVVKRDGKQEAVHFDKITARLKKLSY-------GLSIEHCDPVLVSQKVCTGVYKGVTTS 54
++ KR+G ++ + +KI R++ L +P ++ + + ++
Sbjct: 9 FISKRNGTKQEISLEKIIKRIENACLPVNQYVPKLDKNAINPQELASHIMDRLPATISFQ 68
Query: 55 QLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKK--SFSETIKDMYNHYNERSGLK 112
++D+ A+ A +HPD+ LA R + SN+HKNTK+ SFS T + + + + +G
Sbjct: 69 EMDDFLADYAKTKIVDHPDFGKLAGRFICSNIHKNTKEWNSFSATTQKLRHAIHPGTGKP 128
Query: 113 APLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGK-------VVE 165
A ++ D Y+ +M NA LD+ I Y D+ + FG +TLE SYL+K+ +VE
Sbjct: 129 ASVVNDTYYENVMANAEILDAVIDYKMDYLFTCFGLRTLEYSYLIKIGSPTDRKKRILVE 188
Query: 166 RPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKD 225
RPQ M+MRVAVGIH DI S I+TY +MS+ +FTHASPTLFN GT QLSSCFL+ ++D
Sbjct: 189 RPQDMIMRVAVGIHGSDIKSVIETYDLMSRHYFTHASPTLFNCGTVTPQLSSCFLLGLQD 248
Query: 226 DSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARY 285
DSIEGIYDTLKE AIISK+AGG+G+ H++RA GS I +GT G++ L++FN + +
Sbjct: 249 DSIEGIYDTLKEAAIISKTAGGLGIHFHDLRAKGSPISSWSGTHPGLMAFLQIFNVSVKK 308
Query: 286 VDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSN 345
V QGG KR+GA A+Y+ WH D+ +F+D RKN G E+ R RDLF A+WV DLFMERV++
Sbjct: 309 VSQGGDKRRGAAAIYISDWHLDVKDFIDCRKNAGNEDLRTRDLFPAIWVSDLFMERVKAG 368
Query: 346 GLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYM 405
WSL CP+E PGL+D G EF+ LY KYE EGK K+VV+A+ L+ +I ++IETGTPY+
Sbjct: 369 KNWSLMCPHECPGLSDVHGEEFKALYEKYEAEGKGKEVVKARALFDQINSARIETGTPYV 428
Query: 406 LFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESH 465
FKDT N+KSNQ+N+G IKSSNLCTE++QY+ ETAVCNLASIA+ ++V+ +P
Sbjct: 429 CFKDTINRKSNQENVGIIKSSNLCTEIVQYSDSEETAVCNLASIAVNKFVKYSPIP---- 484
Query: 466 PSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQ 525
S Y D+ ++ V I+T NL+K+IDVN+Y V+ R SN++ RP+G+GVQ
Sbjct: 485 ---------SLRPYVDYREMKRVVKIMTRNLDKVIDVNFYAVDKTRISNMKTRPMGLGVQ 535
Query: 526 GLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREG-PYETYHGSPVSKGI 584
GLAD F L +PF+S EA +NK IFETIYY AL S EIA +G YE + GSP+SKGI
Sbjct: 536 GLADLFFKLRIPFESEEAALINKRIFETIYYGALEASCEIAKEKGETYELFEGSPLSKGI 595
Query: 585 LQPDMWGVNPSDR---------WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNEC 635
Q DM N +R DW LR I K GV NS+ VAPMPTAST+QILGN+E
Sbjct: 596 FQFDMGKENIKNRDIYFNSLPIHDWEQLRRDIMKYGVHNSMFVAPMPTASTAQILGNSES 655
Query: 636 FEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEEL 695
FEP TSN+Y+R VLSG F VVN++++ +L ++G W+ + K +I+ GS+Q +P IP+
Sbjct: 656 FEPLTSNMYNRNVLSGSFQVVNEYVIRELIKLGEWNSVTKQRIMASGGSIQTLPNIPKST 715
Query: 696 KAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGM 755
K ++KTVWEI +T +DMA+ RG ++D +QSLN+ +++P K+ S+ +AW +G+KT +
Sbjct: 716 KELFKTVWEINPRTTLDMAIQRGMFVDQAQSLNLFVEEPELSKVRSMTMYAWEKGIKT-L 774
Query: 756 YYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAKM---------------------AQMV 794
YYLR++ AA A++FTVD +VL+E K A A ++
Sbjct: 775 YYLRTKGAARAVQFTVDKNVLQEVKKEAPSPVAAFSAPVREEEEEKKSSIVVPDPAAALL 834
Query: 795 CSLTNREECMACGS 808
CS+ N C C S
Sbjct: 835 CSINNPGACEMCSS 848
>gi|448936105|gb|AGE59653.1| ribonucleotide reductase large subunit [Acanthocystis turfacea
Chlorella virus TN603.4.2]
Length = 763
Score = 772 bits (1994), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/782 (48%), Positives = 517/782 (66%), Gaps = 45/782 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIE-----------HCDPVLVSQKVCTGVYK 49
M V+KRDG EAV FDKI R+ +L + + + D + +C+ V
Sbjct: 7 MNVIKRDGSSEAVSFDKIMTRIGRLCWAENAKPNHSGRVQNGLEVDISRIVASICSSVVD 66
Query: 50 GVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERS 109
+TT QLD+L A+ AA+M TNHPDY LAARI VSNLHK + S +T M
Sbjct: 67 NITTVQLDDLTADKAASMVTNHPDYGILAARIAVSNLHKQSSNSVLDTYTKM-------- 118
Query: 110 GLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQH 169
+ +++D+ ++ + S + YDRD+D+DYFGF T++R YL KV GKVVERPQH
Sbjct: 119 ---SSMLSDEFMQVVRAHEHEFQSLVNYDRDYDFDYFGFSTMKRLYLTKVDGKVVERPQH 175
Query: 170 MLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIE 229
+RVA+ + DI +TY +S+R FTHASPTLFNAG A L+SCFLV + DDS+
Sbjct: 176 TYLRVAIALWGQDITKVKETYDALSKRKFTHASPTLFNAGFKNANLASCFLVHV-DDSLT 234
Query: 230 GIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQG 289
I+ +L + A +SK GGIG+ + +IR GS I+GTNG S+GIVPML+V++ T+ Y +QG
Sbjct: 235 NIFKSLGDVAQLSKFGGGIGLHLSDIRGRGSKIQGTNGESDGIVPMLKVYDTTSAYANQG 294
Query: 290 GGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWS 349
G +RKG+FAVYLEP H DI +FL LR+N G+E RAR+LFYA+W+ DLFM+RV+++ WS
Sbjct: 295 G-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEETQRARNLFYAMWLNDLFMKRVETDAAWS 353
Query: 350 LFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKD 409
LF P E PGL D +G E+E LY +YE EG+AKKVV+A+++W ++ +QIETG PY+L KD
Sbjct: 354 LFDPKECPGLTDAFGKEYEDLYLRYETEGRAKKVVKARDVWNAMIITQIETGMPYVLNKD 413
Query: 410 TCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKL 469
+ N K+ Q N GTIK SNLC E+++YTS ETAVC + SI L Y+
Sbjct: 414 SVNAKNMQSNAGTIKGSNLCAEIVEYTSTDETAVCVIGSIVLQNYI-------------- 459
Query: 470 VGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
KN +DFE L + ++ +NL++ IDV Y + A SN+R RPIG+GVQGL D
Sbjct: 460 ------KNGAYDFEDLRKHVKVLAKNLDRSIDVMSYAIPEAMTSNMRRRPIGVGVQGLQD 513
Query: 530 TFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDM 589
F L MPFDS A+ LN++IFE IY+ A+ S E+A GP+ T+ GSP S+G++Q +
Sbjct: 514 VFFKLRMPFDSDAARNLNREIFEHIYFAAMEASCELAEEHGPHPTFEGSPASRGVMQYHL 573
Query: 590 WGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL 649
WG P R DW L + + K GVRNSL A MPTAST+QI G+ E EP TSN+YSRR L
Sbjct: 574 WGTEPVTRLDWKTLEERV-KKGVRNSLTTALMPTASTAQICGSVEAMEPITSNLYSRRTL 632
Query: 650 SGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKT 709
+GEF VVN +L+ DL G WS +KN+II + GS+Q++ I ELKAIYKT WE+ KT
Sbjct: 633 AGEFPVVNNYLVRDLIARGTWSEAMKNQIIANGGSIQRVIGIHPELKAIYKTAWELSMKT 692
Query: 710 LVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKF 769
++D+A DRG ++D +QS+N+ + P +TS+ F+AW +GLKT MYY RS+ AA+AI
Sbjct: 693 VIDLAADRGPFVDQTQSMNLFVAAPTMKSMTSMLFYAWKKGLKTLMYYCRSKPAANAIAV 752
Query: 770 TV 771
TV
Sbjct: 753 TV 754
>gi|155371048|ref|YP_001426582.1| hypothetical protein ATCV1_Z101L [Acanthocystis turfacea Chlorella
virus 1]
gi|155124368|gb|ABT16235.1| hypothetical protein ATCV1_Z101L [Acanthocystis turfacea Chlorella
virus 1]
Length = 763
Score = 772 bits (1994), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/787 (48%), Positives = 520/787 (66%), Gaps = 45/787 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIE-----------HCDPVLVSQKVCTGVYK 49
M V+KRDG EAV FDKI R+ +L + + + D + +C+ V
Sbjct: 7 MNVIKRDGSSEAVSFDKIMTRIGRLCWAENAKPNHSGRVQNGLEVDISRIVASICSSVVD 66
Query: 50 GVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERS 109
+TT QLD+L A+ AA+M TNHPDY LAARI VSNLHK + S +T M
Sbjct: 67 NITTVQLDDLTADKAASMVTNHPDYGILAARIAVSNLHKQSSDSVVDTYTKM-------- 118
Query: 110 GLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQH 169
+ +++D+ ++ + + + YDRD+D+DYFGF T++R YL KV GKVVERPQH
Sbjct: 119 ---SSMLSDEFMQVVRAHEQEFQALVKYDRDYDFDYFGFSTMKRLYLTKVDGKVVERPQH 175
Query: 170 MLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIE 229
+RVA+ + +DI +TY +S+R FTHASPTLFNAG A L+SCFLV + DDS+
Sbjct: 176 TYLRVAIALWGEDIAKVKETYDALSKRKFTHASPTLFNAGFRNANLASCFLVHV-DDSLT 234
Query: 230 GIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQG 289
I+ +L + A +SK GGIG+ + +IR GS I+GTNG S+GIVPML+V++ T+ Y +QG
Sbjct: 235 NIFKSLGDVAQLSKFGGGIGLHLSDIRGRGSKIQGTNGESDGIVPMLKVYDTTSAYANQG 294
Query: 290 GGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWS 349
G +RKG+FAVYLEP H DI +FL LR+N G+E RAR+LFYA+W+ DLFM+RV+++ WS
Sbjct: 295 G-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEETQRARNLFYAMWLNDLFMKRVEADVAWS 353
Query: 350 LFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKD 409
LF P E PGL D +G E+E LY +YE EG+AKKVV+A+++W ++ +QIETG PY+L KD
Sbjct: 354 LFDPKECPGLTDAFGKEYEDLYLRYESEGRAKKVVKARDVWNAMIITQIETGMPYVLNKD 413
Query: 410 TCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKL 469
+ N K+ Q N GTI SNLC E+++YTS ETAVC + SI L YV
Sbjct: 414 SVNVKNMQSNAGTITGSNLCAEIVEYTSTDETAVCVIGSIVLQNYV-------------- 459
Query: 470 VGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
KN +DFE L + I+ +NL+K IDV Y + A+ SN+R RPIG+GVQGL D
Sbjct: 460 ------KNGAYDFEDLRKHVKILAKNLDKSIDVMSYAIPEAKTSNMRRRPIGVGVQGLQD 513
Query: 530 TFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDM 589
F L MPFDS A+ LN++IFE IY+ A+ S E+A GP+ T+ GSP S+G++Q +
Sbjct: 514 VFFKLRMPFDSDAAKNLNREIFENIYFAAVEASCELAEEHGPHPTFEGSPASRGVMQYHL 573
Query: 590 WGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL 649
WG P R DW L + + K GVRNSL A MPTAST+QI G+ E EP TSN+YSRR L
Sbjct: 574 WGTEPVTRLDWKTLEERV-KKGVRNSLTTALMPTASTAQICGSVEAMEPITSNLYSRRTL 632
Query: 650 SGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKT 709
+GEF VVN +L+ DL G WS +KN+II + GS+Q++ I ELKAIYKT WE+ KT
Sbjct: 633 AGEFPVVNNYLVRDLIARGTWSEAMKNQIIANGGSIQRVIGIHPELKAIYKTAWELSMKT 692
Query: 710 LVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKF 769
++D+A DRG ++D +QS+N+ + P+ ++S+ F+AW +GLKT MYY RS+ AA+AI
Sbjct: 693 VIDLAADRGPFVDQTQSMNLFVAAPSMKSMSSMLFYAWKKGLKTLMYYCRSKPAANAIAV 752
Query: 770 TVDTSVL 776
TV L
Sbjct: 753 TVGEECL 759
>gi|14581686|gb|AAK69359.1|AF132669_1 ribonucleotide reductase large subunit RR1 [shrimp white spot
syndrome virus]
Length = 848
Score = 771 bits (1991), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 393/854 (46%), Positives = 551/854 (64%), Gaps = 61/854 (7%)
Query: 2 YVVKRDGKQEAVHFDKITARLKKLSY-------GLSIEHCDPVLVSQKVCTGVYKGVTTS 54
++ KR+G ++ + +KI R++ L +P ++ + + ++
Sbjct: 9 FISKRNGTKQEISLEKIIKRIENACLPVNQYVPKLDKNAINPQELASHIMDRLPATISFQ 68
Query: 55 QLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKK--SFSETIKDMYNHYNERSGLK 112
++D+ A+ A +HPD+ LA R + SN+HKNTK+ SFS T + + + + +G
Sbjct: 69 EMDDFLADYAKTKIVDHPDFGKLAGRFICSNIHKNTKEWNSFSATTQKLRHAIHPGTGKP 128
Query: 113 APLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGK-------VVE 165
A ++ D Y+ +M NA LD+ I Y D+ + FG +TLE SYL+K+ +VE
Sbjct: 129 ASVVNDTYYENVMANAEILDAVIDYKMDYLFTCFGLRTLEYSYLIKIGSPTDRKKRILVE 188
Query: 166 RPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKD 225
RPQ M+MRVAVGIH DI S I+TY +MS+ +FTHASPTLFN GT QLSSCFL+ ++D
Sbjct: 189 RPQDMIMRVAVGIHGSDIKSVIETYDLMSRHYFTHASPTLFNCGTVTPQLSSCFLLGLQD 248
Query: 226 DSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARY 285
DSIEGIYDTLKE AIISK+AGG+G+ H++RA GS I +GT G++ L++FN + +
Sbjct: 249 DSIEGIYDTLKEAAIISKTAGGLGIHFHDLRAKGSPISSWSGTHPGLMAFLQIFNVSVKK 308
Query: 286 VDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSN 345
V QGG KR+GA A+Y+ WH D+ +F+D RKN G E+ R RDL A+WV DLFMERV++
Sbjct: 309 VSQGGDKRRGAAAIYISDWHLDVKDFIDCRKNAGNEDLRTRDLLPAIWVSDLFMERVKAG 368
Query: 346 GLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYM 405
WSL CP+E PGL+D G EF+ LY KYE EGK K+VV+A+ L+ +I ++IETGTPY+
Sbjct: 369 KNWSLMCPHECPGLSDVHGEEFKALYEKYEAEGKGKEVVKARALFDQINSARIETGTPYV 428
Query: 406 LFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESH 465
FKDT N+KSNQ+N+G IKSSNLCTE++QY+ ETAVCNLASIA+ ++V+ +P
Sbjct: 429 CFKDTINRKSNQENVGIIKSSNLCTEIVQYSDSEETAVCNLASIAVNKFVKYFPIP---- 484
Query: 466 PSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQ 525
S Y D+ ++ V I+T NL+K+IDVN+Y V+ R SN++ RP+G+GVQ
Sbjct: 485 ---------SLRPYVDYREMKRVVKIMTRNLDKVIDVNFYAVDKTRISNMKTRPMGLGVQ 535
Query: 526 GLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGP-YETYHGSPVSKGI 584
GLAD F L +PF+S EA +NK IFETIYY AL S EIA +G YE + GSP+SKGI
Sbjct: 536 GLADLFFKLRIPFESEEAALINKRIFETIYYGALEASCEIAKEKGETYELFEGSPLSKGI 595
Query: 585 LQPDMWGVNPSDR---------WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNEC 635
Q DM N +R DW LR I K GV NS+ VAPMPTAST+QILGN+E
Sbjct: 596 FQFDMGKENIKNRDIYFNSLPIHDWEQLRRDIMKYGVHNSMFVAPMPTASTAQILGNSES 655
Query: 636 FEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEEL 695
FEP TSN+Y+R VLSG F VVN++++ +L ++G W+ + K +I+ GS+Q +P IP+
Sbjct: 656 FEPLTSNMYNRNVLSGSFQVVNEYVIRELIKLGEWNSVTKQRIMASGGSIQTLPNIPKST 715
Query: 696 KAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGM 755
K ++KTVWEI +T +DMA+ RG ++D +QSLN+ +++P K+ S+ +AW +G+KT +
Sbjct: 716 KELFKTVWEINPRTTLDMAIQRGMFVDQAQSLNLFVEEPELSKVRSMTMYAWEKGIKT-L 774
Query: 756 YYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAKM---------------------AQMV 794
YYLR++ AA A++FTVD +VL+E K A A ++
Sbjct: 775 YYLRTKGAARAVQFTVDKNVLQEVKKEAPSPVAAFSAPVREEEEEKKSSIVVPDPAAALL 834
Query: 795 CSLTNREECMACGS 808
CS+ N C C S
Sbjct: 835 CSINNPGACEMCSS 848
>gi|448933990|gb|AGE57544.1| ribonucleotide reductase large subunit [Acanthocystis turfacea
Chlorella virus NTS-1]
Length = 763
Score = 770 bits (1989), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/787 (48%), Positives = 520/787 (66%), Gaps = 45/787 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIE-----------HCDPVLVSQKVCTGVYK 49
M V+KRDG EAV FDKI R+ +L + + + D + +C+ V
Sbjct: 7 MNVIKRDGSSEAVSFDKIMTRIGRLCWAENAKPNHSGRVQNGLEVDISRIVASICSSVVD 66
Query: 50 GVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERS 109
+TT QLD+L A+ AA+M TNHPDY LAARI VSNLHK + S +T M
Sbjct: 67 NITTVQLDDLTADKAASMVTNHPDYGILAARIAVSNLHKQSSDSVVDTYTKM-------- 118
Query: 110 GLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQH 169
+ +++D+ ++ + + YDRD+D+DYFGF T++R YL KV GK+VERPQH
Sbjct: 119 ---SSMLSDEFMQVVRAHEQEFQELVKYDRDYDFDYFGFSTMKRLYLTKVGGKIVERPQH 175
Query: 170 MLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIE 229
+RVA+ + +DI +TY +S+R FTHASPTLFNAG A L+SCFLV + DDS+
Sbjct: 176 TYLRVAIALWGEDIAKVKETYDALSKRKFTHASPTLFNAGFKNANLASCFLVHV-DDSLT 234
Query: 230 GIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQG 289
I+ +L + A +SK GGIG+ + +IR GS I+GTNG S+GIVPML+V++ T+ Y +QG
Sbjct: 235 NIFKSLGDVAQLSKFGGGIGLHLSDIRGRGSKIQGTNGESDGIVPMLKVYDTTSAYANQG 294
Query: 290 GGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWS 349
G +RKG+FAVYLEP H DI +FL LR+N G+E RAR+LFYA+W+ DLFM+RV+++ WS
Sbjct: 295 G-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEETQRARNLFYAMWLNDLFMKRVEADVAWS 353
Query: 350 LFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKD 409
LF P E PGL D +G E+E LY +YE EG+AKKVV+A+++W ++ +QIETG PY+L KD
Sbjct: 354 LFDPKECPGLTDAFGKEYEDLYLRYETEGRAKKVVKARDVWNAMIITQIETGMPYVLNKD 413
Query: 410 TCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKL 469
+ N K+ Q N GTIK SNLC E+++YT+ ETAVC + SI L YV
Sbjct: 414 SVNVKNMQSNAGTIKGSNLCAEIVEYTATDETAVCVIGSIVLQNYV-------------- 459
Query: 470 VGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
KN +DFE L + ++ +NL+K IDV Y + AR SN+R RPIG+GVQGL D
Sbjct: 460 ------KNGAYDFEDLRKHVKVLAKNLDKSIDVMSYAIPEARTSNMRRRPIGVGVQGLQD 513
Query: 530 TFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDM 589
F L MPFDS A+ LN++IFE IY+ A+ S E+A GP+ T+ GSP S+G++Q +
Sbjct: 514 VFFKLRMPFDSDAARNLNREIFEHIYFAAVEASCELADEHGPHPTFEGSPASRGVMQYHL 573
Query: 590 WGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL 649
WG P R DW L + + K GVRNSL A MPTAST+QI G+ E EP TSN+YSRR L
Sbjct: 574 WGSEPVTRLDWKTLEERV-KKGVRNSLTTALMPTASTAQICGSVEAMEPITSNLYSRRTL 632
Query: 650 SGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKT 709
+GEF +VN +L+ DL G WS +KN+II + GS+Q++ I ELKAIYKT WE+ KT
Sbjct: 633 AGEFPMVNNYLVRDLIARGTWSEAMKNQIIANGGSIQRVIGIHPELKAIYKTAWELSMKT 692
Query: 710 LVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKF 769
++D+A DRG ++D +QS+N+ + P+ +TS+ F+AW +GLKT MYY RS+ AA+AI
Sbjct: 693 VIDLAADRGPFVDQTQSMNLFVAAPSMKSMTSMLFYAWKKGLKTLMYYCRSKPAANAIAV 752
Query: 770 TVDTSVL 776
TV L
Sbjct: 753 TVGEECL 759
>gi|215401540|ref|YP_002332844.1| RR1 [Spodoptera litura nucleopolyhedrovirus II]
gi|209484081|gb|ACI47514.1| RR1 [Spodoptera litura nucleopolyhedrovirus II]
Length = 904
Score = 770 bits (1988), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/797 (48%), Positives = 530/797 (66%), Gaps = 49/797 (6%)
Query: 15 FDKITARLKKLS-YGLSIEHCDPVLVSQKVCTGVYK-GVTTSQLDELAAETAAAMTTNHP 72
D +T L LS + + D + QK+ + + GV+ Q+ A+ AA+MT H
Sbjct: 150 LDNLTILLNNLSGKDIDTRYVDVPKLMQKIKESINENGVSFEQMKLYCADVAASMTYIHY 209
Query: 73 DYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLD 132
DYA LA RI+V +LH F E N+ + + +++ + ++++K+ A L+
Sbjct: 210 DYALLAGRILVEDLHNKVCPCFVEVT----NYLAQNN-----VVSHEFNNLVVKHGALLN 260
Query: 133 SEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHM 192
EI ++RD+DY YFGFKTL YLLKV + ERPQHMLMRVA+ IH DD+ SAI+TY +
Sbjct: 261 REIKHNRDYDYKYFGFKTLTNGYLLKVNDVIAERPQHMLMRVALAIHGDDVMSAIETYQL 320
Query: 193 MSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSV 252
MS FTHASPTLF AGT R Q+ SCFL C+K+DSI+GIY TL E A+IS GG+G+SV
Sbjct: 321 MSLGTFTHASPTLFAAGTCRPQMCSCFLQCIKEDSIDGIYKTLHESALISNLGGGLGLSV 380
Query: 253 HNIRATGSYIRGTNGT--SNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFE 310
++ A NGT S G+V MLRVFN+ R+VDQGG KRKGA A Y+EPWH +I++
Sbjct: 381 QSVSAQ------YNGTTKSGGLVSMLRVFNNMVRHVDQGG-KRKGALAAYVEPWHPEIYD 433
Query: 311 FLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERL 370
L+LR+N G E+ +ARDL LW+PDLFMERV+ N WSLFCP + PGL D +G+ FE L
Sbjct: 434 VLNLRRNMGSEDAKARDLMLGLWIPDLFMERVKENKEWSLFCPKKYPGLLDEYGSSFEIL 493
Query: 371 YTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCT 430
Y KYEK ++ V+A++L+ I+++ +ETG PYML+KD CNK SNQ+NLG IK SNLC
Sbjct: 494 YEKYEKNKLYERQVKARDLFRFIVETNVETGGPYMLYKDPCNKFSNQKNLGIIKCSNLCA 553
Query: 431 EVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTG 490
E++QY ETAVCNLASIA+ + V K + FD+ L +T
Sbjct: 554 EIVQYCDKDETAVCNLASIAVNKCV------------------NVKTKTFDYVLLNRLTK 595
Query: 491 IVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDI 550
IV NLNKIID N+YP A SN +HRP+G+G+QGLAD F+LL +P+DS EA+ +N I
Sbjct: 596 IVVRNLNKIIDSNHYPTAGAANSNKKHRPVGVGIQGLADAFVLLDIPYDSEEARSVNYMI 655
Query: 551 FETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDR-WDWGGLRDMISK 609
ETIY+ AL S E+A +GPYE+Y SP+ +G + D + + P+D W+W LR+ I +
Sbjct: 656 AETIYFSALEASCELAKIDGPYESYENSPLFRGTMHYDNYNIYPTDHLWNWSKLREKIQR 715
Query: 610 NGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGL 669
+GVRNSLLVA MPTA+T+QILGNNE FEP+TSN+Y RRVL+GEF VVN++L+ L ++ +
Sbjct: 716 HGVRNSLLVAYMPTATTAQILGNNESFEPFTSNVYLRRVLAGEFQVVNQYLIKALVDLNI 775
Query: 670 WSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNI 729
++P ++NKI+ ++GSVQ I +IP+ +K ++KT WEIK K ++DMA DR +ID SQSLN+
Sbjct: 776 YTPELRNKILAENGSVQNIDEIPQHVKDLFKTAWEIKSKCMIDMAADRAPFIDQSQSLNL 835
Query: 730 HMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAK 789
+ +P + ++S+HF+ W + LKTGMYYLR++ AA A +FTVD K DD
Sbjct: 836 FVAEPTYSVMSSIHFYTWQKQLKTGMYYLRTKPAAQATQFTVDAEAAASCGKKRKMDD-- 893
Query: 790 MAQMVCSLTNREECMAC 806
EECM+C
Sbjct: 894 --------DGTEECMSC 902
>gi|448925474|gb|AGE49053.1| ribonucleotide reductase large subunit [Acanthocystis turfacea
Chlorella virus Br0604L]
Length = 763
Score = 770 bits (1987), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 383/787 (48%), Positives = 518/787 (65%), Gaps = 45/787 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIE-----------HCDPVLVSQKVCTGVYK 49
M V+KRDG EAV FDKI R+ +L + + + D + +C+ V
Sbjct: 7 MNVIKRDGSSEAVSFDKIMTRIGRLCWAENAKPNHSGRVQNGLEVDISRIVASICSSVVD 66
Query: 50 GVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERS 109
+TT QLD+L A+ AA+M TNHPDY LAARI VSNLHK + S +T M
Sbjct: 67 NITTVQLDDLTADKAASMVTNHPDYGILAARIAVSNLHKQSSNSVLDTYTKM-------- 118
Query: 110 GLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQH 169
+ +++D+ ++ + S + YDRD+D+DYFGF T++R YL KV GKVVERPQH
Sbjct: 119 ---SSMLSDEFMQVVRAHEHEFQSLVNYDRDYDFDYFGFSTMKRLYLTKVDGKVVERPQH 175
Query: 170 MLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIE 229
+RVA+ + DI +TY +S+R FTHASPTLFNAG A L+SCFLV + DDS+
Sbjct: 176 TYLRVAIALWGKDITKVKETYDALSKRKFTHASPTLFNAGFKNANLASCFLVHV-DDSLT 234
Query: 230 GIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQG 289
I+ +L + A +SK GGIG+ + +IR GS I+GTNG S+GIVPML+V++ T+ Y +QG
Sbjct: 235 NIFKSLGDVAQLSKFGGGIGLHLSDIRGRGSKIQGTNGESDGIVPMLKVYDTTSAYANQG 294
Query: 290 GGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWS 349
G +RKG+FAVYLEP H DI +FL LR+N G+E RAR+LFYA+W+ DLFM+RV+++ WS
Sbjct: 295 G-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEETQRARNLFYAMWLNDLFMKRVETDAAWS 353
Query: 350 LFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKD 409
LF P E PGL+D +G E+E LY +YE EG+AKKVV+A+++W ++ +QIETG PY+L KD
Sbjct: 354 LFDPKECPGLSDAFGKEYEDLYLRYETEGRAKKVVKARDVWNAMIITQIETGMPYVLNKD 413
Query: 410 TCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKL 469
+ N K+ Q N GTIK SNLC E+++YTS ETAVC + SI L Y+
Sbjct: 414 SVNAKNMQSNAGTIKGSNLCAEIVEYTSTDETAVCVIGSIVLQNYI-------------- 459
Query: 470 VGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
KN +DFE L + ++ +NL++ IDV Y + A SN+ RPIG+GVQGL D
Sbjct: 460 ------KNGAYDFEDLRKHVKVLAKNLDRSIDVMSYAIPEAMTSNMHRRPIGVGVQGLQD 513
Query: 530 TFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDM 589
F L MPFDS A+ LN++IFE IY+ A+ S E+A GP+ T+ GSP S+G++Q +
Sbjct: 514 VFFKLRMPFDSDAARNLNREIFEHIYFAAMEASCELAEEHGPHPTFEGSPASRGVMQYHL 573
Query: 590 WGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL 649
WG P R DW L + + K GVRNSL A MPTAST+QI G+ E EP TSN+YSRR L
Sbjct: 574 WGTEPVTRLDWKTLGERV-KKGVRNSLTTALMPTASTAQICGSVEAMEPITSNLYSRRTL 632
Query: 650 SGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKT 709
+GEF VVN +L+ DL G WS +KN+II + GS+Q++ I ELKAIYKT WE+ KT
Sbjct: 633 AGEFPVVNNYLVRDLIARGTWSEAMKNQIIANGGSIQRVIGIHPELKAIYKTAWELSMKT 692
Query: 710 LVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKF 769
++D+A DRG ++D +QS+N+ + P +TS+ F+AW +GLKT MYY RS+ AA+AI
Sbjct: 693 VIDLAADRGPFVDQTQSMNLFVAAPTMKSMTSMLFYAWKKGLKTLMYYCRSKPAANAIAV 752
Query: 770 TVDTSVL 776
TV L
Sbjct: 753 TVGEECL 759
>gi|311977696|ref|YP_003986816.1| ribonucleoside-diphosphate reductase large subunit [Acanthamoeba
polyphaga mimivirus]
gi|81990393|sp|Q7T6Y8.2|RIR1_MIMIV RecName: Full=Ribonucleoside-diphosphate reductase large subunit;
AltName: Full=Ribonucleotide reductase large subunit
gi|55664860|gb|AAQ09572.2| ribonucleotide reductase large subunit [Acanthamoeba polyphaga
mimivirus]
gi|308204750|gb|ADO18551.1| ribonucleoside-diphosphate reductase large subunit [Acanthamoeba
polyphaga mimivirus]
gi|339061249|gb|AEJ34553.1| ribonucleotide reductase large subunit [Acanthamoeba polyphaga
mimivirus]
gi|351737467|gb|AEQ60502.1| ribonucleotide reductase large subunit [Acanthamoeba castellanii
mamavirus]
gi|398257153|gb|EJN40761.1| ribonucleotide reductase large subunit [Acanthamoeba polyphaga
lentillevirus]
Length = 881
Score = 766 bits (1979), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 377/825 (45%), Positives = 545/825 (66%), Gaps = 45/825 (5%)
Query: 7 DGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAA 66
+G + + + I ++K+ + + H D +++ + + T +D TA+
Sbjct: 75 NGSIQVITSEIIRTYVEKIFEKMEVTHLDIDKMTKNIFPKLKSINTIKDIDNQIISTASE 134
Query: 67 MTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMK 126
M T+H DY +A I+++NLH NT F ET + +YN+ +E S AP+I++++Y+ I K
Sbjct: 135 MVTDHYDYPKIAVWILMTNLHDNTSDDFLETAEKLYNNKSE-SNKNAPIISENIYNFIKK 193
Query: 127 NAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIH--KDDID 184
+ ++ I YDRD++ FGF+TLE+SYL ++ K+VERPQH+ MRVA+ +H K+D+D
Sbjct: 194 HIKEINRVIRYDRDYNLTIFGFRTLEKSYLKRINKKIVERPQHLFMRVAITLHYRKNDLD 253
Query: 185 SAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKS 244
+TY +S+ +FTHA+PTLFNAGT QLSSCFL+ + DS+E I + KECA+ISK
Sbjct: 254 RIFETYKYLSKGYFTHATPTLFNAGTTHEQLSSCFLLGI-GDSLEEISECWKECALISKH 312
Query: 245 AGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPW 304
AGGIG+ + NIR G+YI T G + G+ +L +FND +RY +QGG KR G+FA+++EPW
Sbjct: 313 AGGIGIHMTNIRVEGAYIASTQGEAGGL-RVLTIFNDISRYANQGG-KRPGSFAIFIEPW 370
Query: 305 HADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWG 364
H DIF FLDL+KN G E RARDLF L + D+FMERV + +WSL CP++ P L + +G
Sbjct: 371 HGDIFFFLDLKKNTGAETERARDLFLGLMINDIFMERVYKDDVWSLMCPSQCPNLLNKYG 430
Query: 365 TEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIK 424
EF + Y KYE EG K ++A +LWF+I++SQIETG PY++FKD N KSNQ N+G +
Sbjct: 431 DEFTKEYLKYESEGIYLKQIRAIDLWFKIMESQIETGVPYVMFKDAINDKSNQINIGVVN 490
Query: 425 SSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEK 484
SNLC E+++ + +VCNL+SI LPR+V+ ++ P+ F+++K
Sbjct: 491 GSNLCCEIVEVSDKNNFSVCNLSSICLPRFVK----IIDEVPT------------FNYQK 534
Query: 485 LAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQ 544
L +++ I+T NLN IID+N+YP++ R +NLR RPIGIGVQGLAD F + PFDS A+
Sbjct: 535 LFKISRILTRNLNNIIDINFYPLDKTRITNLRDRPIGIGVQGLADVFAMFKTPFDSEIAR 594
Query: 545 QLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSD---RWDWG 601
LN+ IFETIYY AL S+++A G Y+TY GSP+S+G Q D+W + S WDW
Sbjct: 595 DLNRKIFETIYYGALTESNKLAREFGTYQTYQGSPISQGKFQFDLWNFDKSQLSGMWDWE 654
Query: 602 GLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
LR I +GVRNSL+ MPTASTSQI+G NEC EPYT NIYSR ++GE+ V+NKHL+
Sbjct: 655 LLRQEILNHGVRNSLVTTCMPTASTSQIMGWNECIEPYTENIYSRSTMAGEYFVINKHLI 714
Query: 662 HDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYI 721
DL E+G+W+ + + I Y GSV IP IP+ +KAIY+TVWEI QK++++MA DR ++
Sbjct: 715 KDLIELGVWNSEMVDLIKYYKGSVANIPNIPDNIKAIYRTVWEIPQKSIIEMAADRAPFV 774
Query: 722 DHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPK 781
D +QS+N+++D+P+F +L S F+AW +GLKTGMYYLRS+ A+ A +F +D +KE
Sbjct: 775 DQTQSMNLYIDKPSFARLNSCLFYAWRKGLKTGMYYLRSKPASSANQFGIDIDKIKEIES 834
Query: 782 ---------------VTDDDDAKMAQMVCS-----LTNREECMAC 806
+T+ + +++ MVC L EC++C
Sbjct: 835 KNGIKKQEDTFDLTDLTNTINQQVSGMVCRFVPAHLRKPGECLSC 879
>gi|298707147|emb|CBJ29920.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 821
Score = 765 bits (1975), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 369/689 (53%), Positives = 489/689 (70%), Gaps = 43/689 (6%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+VVKRDG++E V FDKITAR+++L +GL + DPVLV+QKV G+Y GVTT +LD LA
Sbjct: 173 MHVVKRDGRREPVMFDKITARIRRLCWGLDERYIDPVLVAQKVVQGIYSGVTTWELDTLA 232
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AET A M T HP YA LAARI VSNL + T SF++T+++++ + + ++G +A I+D+V
Sbjct: 233 AETCAYMNTEHPHYARLAARISVSNLQRATSPSFADTVEELHAYVDPKTGRQAGYISDEV 292
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
++I+MKN +D+E+ ++RDF D+FGFKTLER+YLLK+ KV+ERPQ+M MR+A+GIH
Sbjct: 293 HEIVMKNRDLIDAEVKHERDFSLDFFGFKTLERAYLLKLGDKVMERPQYMFMRIAIGIHG 352
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+D+++A +TYH+MS++WF HASPTLF+AGT + QLSSCFL+ K+DSI GIYDTLK+
Sbjct: 353 EDLEAAFETYHLMSEKWFIHASPTLFHAGTCQPQLSSCFLLTTKEDSIAGIYDTLKQWHS 412
Query: 241 ISKSAG-GIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAV 299
+ AG + V V + GS N + P L++ + Q +
Sbjct: 413 VGAGAGFVLAVVVSSSVCVGSISVRANLPTFLCSPRLKIDPVSCPCSHQP----MFPLPL 468
Query: 300 YLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGL 359
+P D+F Y LW+PDLFMERV+ +G WSL CP++ PGL
Sbjct: 469 CTQPLKRDLF--------------------YGLWIPDLFMERVEQDGEWSLMCPSQCPGL 508
Query: 360 ADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQN 419
++CWG EFE LYTKYE+EGK + V+AQ+LWF IL +Q ETG PYM++KD CN+KSN ++
Sbjct: 509 SECWGKEFEELYTKYEREGKYMRKVRAQDLWFAILDAQTETGNPYMMYKDACNRKSNHKH 568
Query: 420 LGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRY 479
LGTI+SSNLCTE+++YT P E AVCNL S+ LP++V E G +
Sbjct: 569 LGTIQSSNLCTEIVEYTDPGEVAVCNLGSVVLPKFVSEDG------------------KS 610
Query: 480 FDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFD 539
FD ++L EVT + NLNKIIDVN+YPVE A+ SN RHRP+GIGVQGLAD FI + MPF+
Sbjct: 611 FDHQRLFEVTKVFVRNLNKIIDVNWYPVEEAQHSNARHRPMGIGVQGLADAFIKMRMPFE 670
Query: 540 STEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWD 599
S A+ LN+DIFET+Y+ A+ S E+A +EGPYET+ GSPVSKGI Q DMWG PSDRWD
Sbjct: 671 SEGARALNRDIFETMYFAAMTASCELAEKEGPYETFEGSPVSKGIFQFDMWGETPSDRWD 730
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR ++K+GVRNSLL+APMPTAST+QILG NEC EPYTSN+Y+RRV +GEF+VVN H
Sbjct: 731 WASLRTRVAKHGVRNSLLLAPMPTASTAQILGFNECIEPYTSNLYARRVKAGEFIVVNPH 790
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKI 688
L DL EMGLWSP ++N+++ GS+ I
Sbjct: 791 LFTDLMEMGLWSPSVRNQLMASGGSIASI 819
>gi|371944844|gb|AEX62665.1| ribonucleoside-diphosphate reductase large subunit [Moumouvirus
Monve]
Length = 849
Score = 763 bits (1971), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 368/778 (47%), Positives = 528/778 (67%), Gaps = 27/778 (3%)
Query: 7 DGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAA 66
+G Q+ + + + + + ++IEH + + V + T ++ ++
Sbjct: 49 NGVQQPLQREVVKKYVVSIFQKMNIEHLNVDSLVNNVYPKLKDVNTLLDVENQIIASSTE 108
Query: 67 MTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMK 126
M T+H DY A I+++NLH+NT + + + + M + N ++G +AP+++ D Y ++K
Sbjct: 109 MLTDHYDYPKTAVYILINNLHENTNEDYLKVVTMMRKNIN-KNGKRAPIVSKDFYKFVLK 167
Query: 127 NAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIH--KDDID 184
+ +++ ++ Y+RD+D FG++TLERSYL K G +VERPQH+ MRVA+ +H ++
Sbjct: 168 HNDKINEQLKYERDYDISIFGYRTLERSYLKKCNGMIVERPQHLWMRVAIALHYRTGNLS 227
Query: 185 SAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKS 244
+TY M+S+ +FTHA+PTLFNAGTP QLSSCFL+ +KDD + + ++ K+CA+ISK
Sbjct: 228 KIFETYEMLSEGYFTHATPTLFNAGTPYEQLSSCFLMGVKDD-MTSLGESWKDCAVISKF 286
Query: 245 AGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPW 304
AGGIG+++ N+R G+YI T GTSNG+ +L ++ND ARY +QGG KR G+FAV++EPW
Sbjct: 287 AGGIGINMSNVRVEGAYISSTQGTSNGL-RVLSIYNDIARYANQGG-KRAGSFAVFIEPW 344
Query: 305 HADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWG 364
H DIF FLDL+KN G E RARDLF L + ++FM+RV+ + WSL CP++ P + +G
Sbjct: 345 HGDIFFFLDLKKNTGAETERARDLFLGLMINNIFMDRVEKDENWSLMCPSQCPDIVGKYG 404
Query: 365 TEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIK 424
EF + Y KYE EG+ K ++A++LWF+I+++QIETG PY+LFKD N+KSNQ N+G I
Sbjct: 405 EEFNKAYLKYENEGRFIKQIKARDLWFKIMETQIETGVPYILFKDAINQKSNQINIGVIN 464
Query: 425 SSNLCTEVIQYTSPTETAVCNLASIALPRY-VREMGVPMESHPSKLVGSRGSKNRYFDFE 483
SNLC E+++++S E AVCNL+SI LP++ + E GVP FD+
Sbjct: 465 GSNLCCEIVEFSSADEYAVCNLSSICLPKFIIHENGVPE-----------------FDYN 507
Query: 484 KLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEA 543
KL +V I+T NLN IIDVNYYPVE R SNLRHRPIG+GVQGLAD F + +PFDS A
Sbjct: 508 KLYKVARIITRNLNNIIDVNYYPVEKTRVSNLRHRPIGVGVQGLADVFAIFKIPFDSDIA 567
Query: 544 QQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP---SDRWDW 600
+ LNK IFETIY+ + S ++A GPYET+ GSP+SKG Q D+W ++ S WDW
Sbjct: 568 RDLNKKIFETIYFGTMTESLQMAKESGPYETFWGSPLSKGKFQFDLWNLSEDKLSGMWDW 627
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+ I GVRNSL MPTASTSQI G NEC EP+T NIYSR L+G++ V+NK+L
Sbjct: 628 KTLREQIMIYGVRNSLTTTCMPTASTSQIKGYNECIEPFTENIYSRSTLAGDYYVINKYL 687
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
+ DL E+GLW+ + + I Y GS+ IP IP+ +K IY+TVWEI Q++++DMA DR +
Sbjct: 688 IKDLMELGLWNSDMVDLIKYYQGSIANIPNIPQNIKNIYRTVWEIPQQSIIDMAADRAPF 747
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE 778
ID +QS+NI +++P+F KL S F+A+ +GLKTGMYYLR + A+ A +F +D +KE
Sbjct: 748 IDQTQSMNIFIEKPDFVKLNSCLFYAYRKGLKTGMYYLRGKPASSANQFGIDIEKIKE 805
>gi|441432444|ref|YP_007354486.1| ribonucleotide reductase large subunit [Acanthamoeba polyphaga
moumouvirus]
gi|440383524|gb|AGC02050.1| ribonucleotide reductase large subunit [Acanthamoeba polyphaga
moumouvirus]
Length = 849
Score = 762 bits (1967), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/778 (47%), Positives = 527/778 (67%), Gaps = 27/778 (3%)
Query: 7 DGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAA 66
+G Q+ + + + + + ++IEH + + V + T ++ ++
Sbjct: 49 NGVQQPLQREVVKKYVVSIFQKMNIEHLNVDSLVNNVYPKLKDVNTLLDVENQIIASSTE 108
Query: 67 MTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMK 126
M T+H DY A I+++NLH+NT + + + + M + N ++G +AP+++ D Y ++K
Sbjct: 109 MLTDHYDYPKTAVYILINNLHENTNEDYLKVVTMMRKNIN-KNGKRAPIVSKDFYKFVLK 167
Query: 127 NAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIH--KDDID 184
+ +++ ++ Y+RD+D FG++TLERSYL K G +VERPQH+ MRVA+ +H ++
Sbjct: 168 HNDKINEQLKYERDYDISIFGYRTLERSYLKKCNGMIVERPQHLWMRVAIALHYRTGNLS 227
Query: 185 SAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKS 244
+TY M+S+ +FTHA+PTLFNAGTP QLSSCFL+ +KDD + + ++ K+CA+ISK
Sbjct: 228 KIFETYEMLSEGYFTHATPTLFNAGTPYEQLSSCFLMGVKDD-MTSLGESWKDCAVISKF 286
Query: 245 AGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPW 304
AGGIG+++ N+R G+YI T GTSNG+ +L ++ND ARY +QGG KR G+FAV++EPW
Sbjct: 287 AGGIGINMSNVRVEGAYISSTQGTSNGL-RVLSIYNDIARYANQGG-KRAGSFAVFIEPW 344
Query: 305 HADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWG 364
H DIF FLDL+KN G E RARDLF L + ++FM+RV+ + WSL CP++ P + +G
Sbjct: 345 HGDIFFFLDLKKNTGAETERARDLFLGLMINNIFMDRVEKDENWSLMCPSQCPDIVGKYG 404
Query: 365 TEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIK 424
EF + Y KYE EG+ K ++A++LWF+I+++QIETG PY+LFKD N+KSNQ N+G I
Sbjct: 405 EEFNKAYLKYENEGRFIKQIKARDLWFKIMETQIETGVPYILFKDAINQKSNQINIGVIN 464
Query: 425 SSNLCTEVIQYTSPTETAVCNLASIALPRY-VREMGVPMESHPSKLVGSRGSKNRYFDFE 483
SNLC E+++++S E AVCNL+SI LP++ + E GVP FD+
Sbjct: 465 GSNLCCEIVEFSSADEYAVCNLSSICLPKFIIHENGVPE-----------------FDYN 507
Query: 484 KLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEA 543
KL +V I+T NLN IIDVNYYPVE R SNLRHRPIG+GVQGLAD F + +PFDS A
Sbjct: 508 KLYKVARIITRNLNNIIDVNYYPVEKTRVSNLRHRPIGVGVQGLADVFAIFKIPFDSDIA 567
Query: 544 QQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP---SDRWDW 600
+ LN+ IFETIY+ + S ++A GPYET+ GSP+SKG Q D+W + S WDW
Sbjct: 568 RDLNRKIFETIYFGTMTESLQMAKESGPYETFWGSPLSKGKFQFDLWNLGEDKLSGMWDW 627
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR+ I GVRNSL MPTASTSQI G NEC EP+T NIYSR L+G++ V+NK+L
Sbjct: 628 KTLREQIMIYGVRNSLTTTCMPTASTSQIKGYNECIEPFTENIYSRSTLAGDYYVINKYL 687
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
+ DL E+GLW+ + + I Y GS+ IP IP+ +K IY+TVWEI Q++++DMA DR +
Sbjct: 688 IKDLMELGLWNSDMVDLIKYYQGSIANIPNIPQNIKNIYRTVWEIPQQSIIDMAADRAPF 747
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE 778
ID +QS+NI +++P+F KL S F+A+ +GLKTGMYYLR + A+ A +F +D +KE
Sbjct: 748 IDQTQSMNIFIEKPDFVKLNSCLFYAYRKGLKTGMYYLRGKPASSANQFGIDIEKIKE 805
>gi|125541523|gb|EAY87918.1| hypothetical protein OsI_09340 [Oryza sativa Indica Group]
Length = 676
Score = 758 bits (1956), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 362/408 (88%), Positives = 384/408 (94%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYVVKRDG+QEAVHFDKITARLK+LSYGLS EHCDPVLV+QKVC GVYKGVTTSQL ELA
Sbjct: 1 MYVVKRDGRQEAVHFDKITARLKRLSYGLSQEHCDPVLVAQKVCAGVYKGVTTSQLGELA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAAAMT +HPDYASLAARI +SNLHK T KSFSETIK MY HY+ERSGL APLIADDV
Sbjct: 61 AETAAAMTASHPDYASLAARIAISNLHKTTMKSFSETIKVMYMHYDERSGLLAPLIADDV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+IIMKN RLDSEIIYDRDFDYDYFGFKTLERSYLLKV GKVVERPQHMLMRV++GIHK
Sbjct: 121 YEIIMKNTTRLDSEIIYDRDFDYDYFGFKTLERSYLLKVVGKVVERPQHMLMRVSIGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDI+SAIKTYHMMSQRWFTHASPTLFNAGTPR QLSSCFL+CMKDDSIEGIYDTL ECA
Sbjct: 181 DDIESAIKTYHMMSQRWFTHASPTLFNAGTPRPQLSSCFLICMKDDSIEGIYDTLSECAT 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+HNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA+Y
Sbjct: 241 ISKCAGGIGLSIHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIFEFLDLRKNHGKEE+RARDLFYALW+PDLFMERVQ+N WSLFCPNEAPGLA
Sbjct: 301 LEPWHADIFEFLDLRKNHGKEENRARDLFYALWIPDLFMERVQNNENWSLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFK 408
DCWG EF+ LY KYE+EGKAKKVV AQ LWF+ILK+QIETGTPYML+K
Sbjct: 361 DCWGDEFQNLYKKYEREGKAKKVVSAQALWFDILKAQIETGTPYMLYK 408
Score = 484 bits (1246), Expect = e-134, Method: Compositional matrix adjust.
Identities = 223/279 (79%), Positives = 255/279 (91%), Gaps = 2/279 (0%)
Query: 532 ILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWG 591
I G P+ +AQQLNKDIFETIYYHAL+ S+EIAA+EGPYETY GSPVSKGILQPDMW
Sbjct: 398 IETGTPYMLYKAQQLNKDIFETIYYHALKASAEIAAKEGPYETYSGSPVSKGILQPDMWN 457
Query: 592 VNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSG 651
V PSDRW+W LR+MISK GVRNSLL+APMPTASTSQILGNNECFEPYTSNIYSRRVLSG
Sbjct: 458 VVPSDRWNWSDLREMISKVGVRNSLLIAPMPTASTSQILGNNECFEPYTSNIYSRRVLSG 517
Query: 652 EFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLV 711
EFVVVNKHLLHDLTEMG+WSP++KNKI+Y+DGSVQKI +IP++LKAIY+TVWEIKQKT+V
Sbjct: 518 EFVVVNKHLLHDLTEMGIWSPVLKNKIVYEDGSVQKISEIPDDLKAIYRTVWEIKQKTIV 577
Query: 712 DMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTV 771
DMA+DRGCYID SQSLNIHMDQPNFGKLTSLHFHAW +GLKTGMYYLR+RAAADAIKFTV
Sbjct: 578 DMAIDRGCYIDQSQSLNIHMDQPNFGKLTSLHFHAWSKGLKTGMYYLRTRAAADAIKFTV 637
Query: 772 DTSVLKENPKVTDDDD--AKMAQMVCSLTNREECMACGS 808
DT++LK+ +++D +KMA++VCSL NR+EC+ACGS
Sbjct: 638 DTTLLKDKQHNAEEEDVQSKMAEVVCSLNNRDECLACGS 676
>gi|269860694|ref|XP_002650066.1| ribonucleoside-diphosphate reductase large chain [Enterocytozoon
bieneusi H348]
gi|220066497|gb|EED43976.1| ribonucleoside-diphosphate reductase large chain [Enterocytozoon
bieneusi H348]
Length = 778
Score = 756 bits (1952), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 376/769 (48%), Positives = 516/769 (67%), Gaps = 31/769 (4%)
Query: 29 LSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHK 88
IE + L KV +G+ +T +++ + +E AA M T HP Y LAA I++ +LH+
Sbjct: 19 FKIEGLNLPLFFDKVSSGLALDMTPTEMTKYCSEIAATMITIHPSYNKLAAIILIKHLHE 78
Query: 89 NTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGF 148
NT +FS+ K MY + + D + ++I+ N +S + Y+RD+++DYF
Sbjct: 79 NTFNTFSD--KMMYIQQEKN------IFDDHIMELIINNMNVYNSIVKYERDYNFDYFAL 130
Query: 149 KTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNA 208
+L++SY ++V V+ERPQ + MRVA+ +H DD ++ KTY ++SQ+++THA+PTL+N+
Sbjct: 131 ISLQKSYQIQVNNTVIERPQDIYMRVAIELHGDDFNNVQKTYDLLSQQYYTHATPTLYNS 190
Query: 209 GTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGT 268
+ QL+SCFL+ MK D+I GI+DT+KE AI SK +GG+G+ + N+R S + T G
Sbjct: 191 CFKKNQLASCFLLGMKSDTIAGIFDTIKEAAIYSKLSGGVGLHISNLRCDKSQLVTTGGY 250
Query: 269 SNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDL 328
S GI+P++++ ND+ +Y++QGG +R A YLEPWH DI +FLDLRKN G EE RARD
Sbjct: 251 SKGIIPIVKLINDSMKYINQGGARRCATCAFYLEPWHKDILKFLDLRKNTGIEEERARDS 310
Query: 329 FYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQN 388
F ALW+ DLFMERV+ N +WSLF PN A GL D WG +F +LY YE E + + AQ
Sbjct: 311 FTALWINDLFMERVEKNEMWSLFDPNIAKGLQDVWGDQFNKLYAYYE-ETIERTTIPAQK 369
Query: 389 LWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLAS 448
LW EI+ SQIETGTPYM +KDTCN+ SNQ N+GTIKSSNLC E+IQY+ TAVCNLAS
Sbjct: 370 LWKEIICSQIETGTPYMCYKDTCNRYSNQNNIGTIKSSNLCAEIIQYSDSDITAVCNLAS 429
Query: 449 IALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVE 508
I LP+YV+ + S S N YFDF++L V IVT N+NK+ID + +P E
Sbjct: 430 ICLPKYVK-------------INSTTS-NYYFDFQELYTVVKIVTYNMNKMIDKSAFPTE 475
Query: 509 TARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAR 568
+++ N RPIGIGVQGLAD F L+G F+S EA+ LNK IFET+Y+ AL S E+A +
Sbjct: 476 ESKKGNSLFRPIGIGVQGLADVFFLMGYSFESKEARDLNKMIFETLYFGALEASCELAQK 535
Query: 569 EGPYETYHGSPVSKGILQPDMW-----GVNP--SDRWDWGGLRDMISKNGVRNSLLVAPM 621
GPY Y GS S+GI + + VN S W+W LR + GVRNSL +A M
Sbjct: 536 HGPYSYYQGSMYSQGIFHFEKFCEGRINVNEILSGMWNWEELRIKMKTYGVRNSLTLALM 595
Query: 622 PTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYD 681
PTASTSQI GN+EC EP SNI++RR +GEF +VNK+L+ DL ++GLW+ IK II
Sbjct: 596 PTASTSQICGNSECIEPIQSNIFTRRTFAGEFQIVNKYLMKDLIKLGLWNNEIKQLIIEY 655
Query: 682 DGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTS 741
+GS+QKIP IP+ +K +YKTVWE+K K+++DMA+DR ++D SQSLN+ + +P +G L+S
Sbjct: 656 EGSIQKIPIIPQHVKDLYKTVWELKMKSVLDMAIDRQAFVDQSQSLNLFVKEPTYGILSS 715
Query: 742 LHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTS-VLKENPKVTDDDDAK 789
+HF+ W LKTGMYYLR+ A AIKFTVD +LK D ++ K
Sbjct: 716 MHFYGWKNKLKTGMYYLRTCPLAKAIKFTVDKELILKTLSSFKDSENDK 764
>gi|448825571|ref|YP_007418502.1| ribonucleoside-diphosphate reductase large subunit [Megavirus lba]
gi|444236756|gb|AGD92526.1| ribonucleoside-diphosphate reductase large subunit [Megavirus lba]
Length = 881
Score = 753 bits (1944), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/778 (47%), Positives = 522/778 (67%), Gaps = 27/778 (3%)
Query: 7 DGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAA 66
DG ++ I ++ +S + I D + V + T + +++
Sbjct: 81 DGNTMPLYRGIIKQYIESISQKMEINDIDIDAIVNNVYPKLKDINTLDDIQNQIIASSSE 140
Query: 67 MTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMK 126
M +H +Y +A I+++NLH++T + + +++N+ N ++G+ AP+++D Y + K
Sbjct: 141 MMIDHYNYPKIATWILINNLHEHTHDDYFHVVSELHNNIN-KNGIHAPIVSDGFYKFVKK 199
Query: 127 NAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIH--KDDID 184
N ++ I Y D+ + FGF+TLE+SYL KV+G ++ERPQH+ MRVA+ IH +D++
Sbjct: 200 NRDEINKHINYQLDYGFSIFGFRTLEQSYLKKVKGIIIERPQHLFMRVAIAIHYRNNDLN 259
Query: 185 SAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKS 244
+TY M+SQ +FTHA+PTLFNAGT QLSSCFL+ +KDD + I D K+CA+ISK
Sbjct: 260 RIFETYEMLSQGYFTHATPTLFNAGTTHEQLSSCFLLGIKDD-MGAIGDCWKDCAMISKY 318
Query: 245 AGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPW 304
AGGIGV+V NIRA GSYI T GT++G+ +L VFN+ +RY +QGG KR G+FA+Y+EPW
Sbjct: 319 AGGIGVNVSNIRADGSYINSTQGTASGL-RVLTVFNNISRYANQGG-KRAGSFAIYIEPW 376
Query: 305 HADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWG 364
HADI+ FLDL+KN G E RARDLF L + D+F+ERV+ +G+WSL CP+E P + +G
Sbjct: 377 HADIYFFLDLKKNTGAETERARDLFLGLMINDIFIERVREDGVWSLMCPSECPNIVGKYG 436
Query: 365 TEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIK 424
TEF Y YEK GK K + A++LWF+I+++QIETG PY++FKD N KSNQ N+G I
Sbjct: 437 TEFNETYLSYEKSGKYMKQISARDLWFKIMETQIETGVPYIVFKDAVNYKSNQINIGVIN 496
Query: 425 SSNLCTEVIQYTSPTETAVCNLASIALPRY-VREMGVPMESHPSKLVGSRGSKNRYFDFE 483
SNLC+E+++Y+S E A CNL+SI LPR+ + + GVP FD++
Sbjct: 497 GSNLCSEIVEYSSADEYATCNLSSICLPRFIIHKNGVPE-----------------FDYD 539
Query: 484 KLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEA 543
L +V+GI+T NLN +ID+N+YPV+ R SN++HRPIG+GVQG+AD F + PFDS A
Sbjct: 540 MLRKVSGIMTRNLNNVIDINFYPVDKTRVSNIKHRPIGVGVQGVADVFAIFKTPFDSELA 599
Query: 544 QQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP---SDRWDW 600
+ LN+ IFETIY+ L S +++ G YET+ GSP+SKG Q D+W ++ S WDW
Sbjct: 600 RDLNRKIFETIYFGCLEESMKLSKEFGAYETFIGSPLSKGKFQFDLWNLSSDKLSGMWDW 659
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L I K GVRNSL MPTASTSQI+G NEC EP+T NIYSR L+G++ V+NK+L
Sbjct: 660 DSLMIDIQKYGVRNSLTTTCMPTASTSQIMGYNECIEPFTENIYSRSTLAGDYYVINKYL 719
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
+ DL ++GLW+ + + I Y GS+ KIP IP+ +K IY+TVWEI QK++++MA +R +
Sbjct: 720 VQDLIDLGLWNSDMIDLIKYYRGSISKIPTIPQHIKDIYRTVWEIPQKSIIEMAAERAPF 779
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE 778
ID +QS+NI ++ P+F KL S +A GLKTGMYYLRS+AA A +F +D +KE
Sbjct: 780 IDQTQSMNIFIESPSFAKLNSCLLYAHKLGLKTGMYYLRSKAATSADQFGIDIDKIKE 837
>gi|363540886|ref|YP_004894644.1| mg593 gene product [Megavirus chiliensis]
gi|350612051|gb|AEQ33495.1| ribonucleoside-diphosphate reductase large subunit [Megavirus
chiliensis]
Length = 881
Score = 753 bits (1943), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/778 (47%), Positives = 522/778 (67%), Gaps = 27/778 (3%)
Query: 7 DGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAA 66
DG ++ I ++ +S + I D + V + T + +++
Sbjct: 81 DGNTMPLYRGIIKQYIESISQKMEINDIDIDAIVNNVYPKLKDINTLDDIQNQIIASSSE 140
Query: 67 MTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMK 126
M +H +Y +A I+++NLH++T + + +++N+ N ++G+ AP+++D Y + K
Sbjct: 141 MMIDHYNYPKIATWILINNLHEHTHDDYFHVVSELHNNIN-KNGIHAPIVSDGFYKFVKK 199
Query: 127 NAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIH--KDDID 184
N ++ I Y D+ + FGF+TLE+SYL KV+G ++ERPQH+ MRVA+ IH +D++
Sbjct: 200 NRDEINKHINYQLDYGFSIFGFRTLEQSYLKKVKGIIIERPQHLFMRVAIAIHYRNNDLN 259
Query: 185 SAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKS 244
+TY M+SQ +FTHA+PTLFNAGT QLSSCFL+ +KDD + I D K+CA+ISK
Sbjct: 260 RIFETYEMLSQGYFTHATPTLFNAGTTHEQLSSCFLLGIKDD-MGAIGDCWKDCAMISKY 318
Query: 245 AGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPW 304
AGGIGV+V NIRA GSYI T GT++G+ +L VFN+ +RY +QGG KR G+FA+Y+EPW
Sbjct: 319 AGGIGVNVSNIRADGSYINSTQGTASGL-RVLTVFNNISRYANQGG-KRAGSFAIYIEPW 376
Query: 305 HADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWG 364
HADI+ FLDL+KN G E RARDLF L + D+F+ERV+ +G+WSL CP+E P + +G
Sbjct: 377 HADIYFFLDLKKNTGAETERARDLFLGLMINDIFIERVREDGVWSLMCPSECPNIVGKYG 436
Query: 365 TEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIK 424
TEF Y YEK GK K + A++LWF+I+++QIETG PY++FKD N KSNQ N+G I
Sbjct: 437 TEFNETYLSYEKSGKYMKQISARDLWFKIMETQIETGVPYIVFKDAVNYKSNQINVGVIN 496
Query: 425 SSNLCTEVIQYTSPTETAVCNLASIALPRY-VREMGVPMESHPSKLVGSRGSKNRYFDFE 483
SNLC+E+++Y+S E A CNL+SI LPR+ + + GVP FD++
Sbjct: 497 GSNLCSEIVEYSSADEYATCNLSSICLPRFIIHKNGVPE-----------------FDYD 539
Query: 484 KLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEA 543
L +V+GI+T NLN +ID+N+YPV+ R SN++HRPIG+GVQG+AD F + PFDS A
Sbjct: 540 MLRKVSGIMTRNLNNVIDINFYPVDKTRVSNIKHRPIGVGVQGVADVFAIFKTPFDSELA 599
Query: 544 QQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP---SDRWDW 600
+ LN+ IFETIY+ L S +++ G YET+ GSP+SKG Q D+W ++ S WDW
Sbjct: 600 RDLNRKIFETIYFGCLEESMKLSKEFGAYETFIGSPLSKGKFQFDLWNLSSDKLSGMWDW 659
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L I K GVRNSL MPTASTSQI+G NEC EP+T NIYSR L+G++ V+NK+L
Sbjct: 660 DSLMIDIQKYGVRNSLTTTCMPTASTSQIMGYNECIEPFTENIYSRSTLAGDYYVINKYL 719
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
+ DL ++GLW+ + + I Y GS+ KIP IP+ +K IY+TVWEI QK++++MA +R +
Sbjct: 720 VQDLIDLGLWNSDMIDLIKYYRGSISKIPTIPQHIKDIYRTVWEIPQKSIIEMAAERAPF 779
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE 778
ID +QS+NI ++ P+F KL S +A GLKTGMYYLRS+AA A +F +D +KE
Sbjct: 780 IDQTQSMNIFIESPSFAKLNSCLLYAHKLGLKTGMYYLRSKAATSADQFGIDIDKIKE 837
>gi|371943944|gb|AEX61772.1| ribonucleoside-diphosphate reductase large subunit [Megavirus
courdo7]
Length = 881
Score = 753 bits (1943), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/778 (47%), Positives = 522/778 (67%), Gaps = 27/778 (3%)
Query: 7 DGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAA 66
DG ++ I ++ +S + I D + V + T + +++
Sbjct: 81 DGNTMPLYRGIIKQYIESISQKMEINDIDIDAIVNNVYPKLKDINTLDDIQNQIIASSSE 140
Query: 67 MTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMK 126
M +H +Y +A I+++NLH++T + + +++N+ N ++G+ AP+++D Y + K
Sbjct: 141 MMIDHYNYPKIATWILINNLHEHTHDDYFHVVSELHNNIN-KNGIHAPIVSDGFYKFVKK 199
Query: 127 NAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIH--KDDID 184
N ++ I Y D+ + FGF+TLE+SYL KV+G ++ERPQH+ MRVA+ IH +D++
Sbjct: 200 NRDEINKHINYQLDYGFSIFGFRTLEQSYLKKVKGIIIERPQHLFMRVAIAIHYRNNDLN 259
Query: 185 SAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKS 244
+TY M+SQ +FTHA+PTLFNAGT QLSSCFL+ +KDD + I D K+CA+ISK
Sbjct: 260 RIFETYEMLSQGYFTHATPTLFNAGTTHEQLSSCFLLGIKDD-MGAIGDCWKDCAMISKY 318
Query: 245 AGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPW 304
AGGIGV+V NIRA GSYI T GT++G+ +L VFN+ +RY +QGG KR G+FA+Y+EPW
Sbjct: 319 AGGIGVNVSNIRADGSYINSTQGTASGL-RVLTVFNNISRYANQGG-KRAGSFAIYIEPW 376
Query: 305 HADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWG 364
HADI+ FLDL+KN G E RARDLF L + D+F+ERV+ +G+WSL CP+E P + +G
Sbjct: 377 HADIYFFLDLKKNTGAETERARDLFLGLMINDIFIERVREDGVWSLMCPSECPNIVGKYG 436
Query: 365 TEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIK 424
TEF Y YEK GK K + A++LWF+I+++QIETG PY++FKD N KSNQ N+G I
Sbjct: 437 TEFNEAYLSYEKSGKYMKQISARDLWFKIMETQIETGVPYIVFKDAVNYKSNQINIGVIN 496
Query: 425 SSNLCTEVIQYTSPTETAVCNLASIALPRY-VREMGVPMESHPSKLVGSRGSKNRYFDFE 483
SNLC+E+++Y+S E A CNL+SI LPR+ + + GVP FD++
Sbjct: 497 GSNLCSEIVEYSSADEYATCNLSSICLPRFIIHKNGVPE-----------------FDYD 539
Query: 484 KLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEA 543
L +V+GI+T NLN +ID+N+YPV+ R SN++HRPIG+GVQG+AD F + PFDS A
Sbjct: 540 MLRKVSGIMTRNLNNVIDINFYPVDKTRVSNIKHRPIGVGVQGVADVFAIFKTPFDSKLA 599
Query: 544 QQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP---SDRWDW 600
+ LN+ IFETIY+ L S +++ G YET+ GSP+SKG Q D+W ++ S WDW
Sbjct: 600 RDLNRKIFETIYFGCLEESMKLSKEFGAYETFIGSPLSKGKFQFDLWNLSSDKLSGMWDW 659
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L I K GVRNSL MPTASTSQI+G NEC EP+T NIYSR L+G++ V+NK+L
Sbjct: 660 DSLMIDIQKYGVRNSLTTTCMPTASTSQIMGYNECIEPFTENIYSRSTLAGDYYVINKYL 719
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
+ DL ++GLW+ + + I Y GS+ KIP IP+ +K IY+TVWEI QK++++MA +R +
Sbjct: 720 VQDLIDLGLWNSDMIDLIKYYRGSISKIPTIPQHIKDIYRTVWEIPQKSIIEMAAERAPF 779
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE 778
ID +QS+NI ++ P+F KL S +A GLKTGMYYLRS+AA A +F +D +KE
Sbjct: 780 IDQTQSMNIFIESPSFAKLNSCLLYAHKLGLKTGMYYLRSKAATSADQFGIDIDKIKE 837
>gi|425701505|gb|AFX92667.1| ribonucleoside-diphosphate reductase large subunit [Megavirus
courdo11]
Length = 881
Score = 752 bits (1942), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 367/778 (47%), Positives = 522/778 (67%), Gaps = 27/778 (3%)
Query: 7 DGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAA 66
DG ++ I ++ +S + I D + V + T + +++
Sbjct: 81 DGNTMPLYRGIIKQYIESISQKMEINDIDIDAIVNNVYPKLKDINTLDDIQNQIIASSSE 140
Query: 67 MTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMK 126
M +H +Y +A I+++NLH++T + + +++N+ N ++G+ AP+++D Y + K
Sbjct: 141 MMIDHYNYPKIATWILINNLHEHTHDDYFHVVSELHNNIN-KNGIHAPIVSDGFYKFVKK 199
Query: 127 NAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIH--KDDID 184
N ++ I Y D+ + FGF+TLE+SYL KV+G ++ERPQH+ MRVA+ IH +D++
Sbjct: 200 NRDEINKHINYQLDYGFSIFGFRTLEQSYLKKVKGIIIERPQHLFMRVAIAIHYRNNDLN 259
Query: 185 SAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKS 244
+TY M+SQ +FTHA+PTLFNAGT QLSSCFL+ +KDD + I D K+CA+ISK
Sbjct: 260 RIFETYEMLSQGYFTHATPTLFNAGTTHEQLSSCFLLGIKDD-MGAIGDCWKDCAMISKY 318
Query: 245 AGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPW 304
AGGIGV+V NIRA GSYI T GT++G+ +L VFN+ +RY +QGG KR G+FA+Y+EPW
Sbjct: 319 AGGIGVNVSNIRADGSYINSTQGTASGL-RVLTVFNNISRYANQGG-KRAGSFAIYIEPW 376
Query: 305 HADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWG 364
HADI+ FLDL+KN G E RARDLF L + D+F+ERV+ +G+WSL CP+E P + +G
Sbjct: 377 HADIYFFLDLKKNTGAETERARDLFLGLMINDIFIERVREDGVWSLMCPSECPNIVGKYG 436
Query: 365 TEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIK 424
TEF Y YEK GK K + A++LWF+I+++QIETG PY++FKD N KSNQ N+G I
Sbjct: 437 TEFNEAYLSYEKSGKYMKQISARDLWFKIMETQIETGVPYIVFKDAVNYKSNQINIGVIN 496
Query: 425 SSNLCTEVIQYTSPTETAVCNLASIALPRY-VREMGVPMESHPSKLVGSRGSKNRYFDFE 483
SNLC+E+++Y+S E A CNL+SI LPR+ + + GVP FD++
Sbjct: 497 GSNLCSEIVEYSSADEYATCNLSSICLPRFIIHKNGVPE-----------------FDYD 539
Query: 484 KLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEA 543
L +V+GI+T NLN +ID+N+YPV+ R SN++HRPIG+GVQG+AD F + PFDS A
Sbjct: 540 MLRKVSGIMTRNLNNVIDINFYPVDKTRISNIKHRPIGVGVQGVADVFAIFKTPFDSELA 599
Query: 544 QQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP---SDRWDW 600
+ LN+ IFETIY+ L S +++ G YET+ GSP+SKG Q D+W ++ S WDW
Sbjct: 600 RDLNRKIFETIYFGCLEESMKLSKEFGAYETFIGSPLSKGKFQFDLWNLSSDKLSGMWDW 659
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L I K GVRNSL MPTASTSQI+G NEC EP+T NIYSR L+G++ V+NK+L
Sbjct: 660 DSLMIDIQKYGVRNSLTTTCMPTASTSQIMGYNECIEPFTENIYSRSTLAGDYYVINKYL 719
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
+ DL ++GLW+ + + I Y GS+ KIP IP+ +K IY+TVWEI QK++++MA +R +
Sbjct: 720 VQDLIDLGLWNSDMIDLIKYYRGSISKIPTIPQHIKDIYRTVWEIPQKSIIEMAAERAPF 779
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE 778
ID +QS+NI ++ P+F KL S +A GLKTGMYYLRS+AA A +F +D +KE
Sbjct: 780 IDQTQSMNIFIESPSFAKLNSCLLYAHKLGLKTGMYYLRSKAATSADQFGIDIDKIKE 837
>gi|9632159|ref|NP_048985.1| hypothetical protein [Paramecium bursaria Chlorella virus 1]
gi|2447101|gb|AAC96959.1| hypothetical protein [Paramecium bursaria Chlorella virus 1]
Length = 771
Score = 749 bits (1934), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/788 (49%), Positives = 526/788 (66%), Gaps = 46/788 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKL------------SYGLSIEHCDPVLVSQKVCTGVY 48
M V+KRDG +E + FDKI R+++L S ++ + D + VC +
Sbjct: 14 MVVLKRDGSKENISFDKILQRIQRLCWPVNSKPVYKGSRAMTGLNVDVSKIVASVCASIV 73
Query: 49 KGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNER 108
G++T QLDEL A+ +A+MTT HPDY LAARI VSNL K T + I D Y
Sbjct: 74 DGISTVQLDELTADKSASMTTEHPDYGILAARISVSNLQKQTH----DKITDAYAEI--- 126
Query: 109 SGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQ 168
A L+ +D + + K+A + + YDRD+D+DYFGFKT+ER YL KV K+VERPQ
Sbjct: 127 ----AHLLNEDFKENLEKHADEYQAFVDYDRDYDFDYFGFKTMERLYLTKVGDKIVERPQ 182
Query: 169 HMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSI 228
H+ +RVA+G+ DI +TY +S R FTHASPTLFN+G +AQL+SCFL+ + +DS+
Sbjct: 183 HVYLRVAIGLWGSDIAKVKETYDALSCRKFTHASPTLFNSGFKKAQLASCFLMTV-EDSL 241
Query: 229 EGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQ 288
IY L +CA +SK GG+G+++ +IR G+ I GTNG S+GIVPML+VF+ T+ Y +Q
Sbjct: 242 ADIYKALGDCAQLSKHGGGLGINISDIRGRGAMINGTNGESDGIVPMLKVFDTTSAYANQ 301
Query: 289 GGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLW 348
GG +RKG+FA+YLEP H DI +FL +++N G+E RAR+LFYA+W+ DLFM+RV+++ W
Sbjct: 302 GG-RRKGSFAIYLEPHHPDIMDFLLMKRNQGEESLRARNLFYAVWLNDLFMKRVETDAQW 360
Query: 349 SLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFK 408
SLF P+E PGL D +G E+ LYT+YE EGKAK VV+A+++W ++ + IETG PY+ K
Sbjct: 361 SLFDPSECPGLTDAFGDEYAELYTRYEAEGKAKNVVKARDVWNTMVTTIIETGQPYVANK 420
Query: 409 DTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSK 468
DT NKK+ Q N GTI+ SNLC E+++YTS ETAVC + S+ L YV
Sbjct: 421 DTVNKKNMQSNAGTIRGSNLCIEILEYTSKEETAVCVIGSVVLKNYV------------- 467
Query: 469 LVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLA 528
KN FDF+ L + I+ +NL++ IDV YP++ A SN R RPIG+GVQGL
Sbjct: 468 -------KNDKFDFDDLRKNVKILAKNLDRSIDVMSYPIKEAETSNKRRRPIGVGVQGLQ 520
Query: 529 DTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPD 588
D F L +PFDS EA+ LN++IFE IYY A+ S E+A GP+ T+ GSP SKGILQ
Sbjct: 521 DVFFKLKLPFDSPEARDLNREIFEHIYYAAVEASVELAEIHGPHPTFEGSPASKGILQYH 580
Query: 589 MWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRV 648
MW V P DW GL + + K GVRNSLL A MPTAST+QI G+ E FEP TSN+YSRR
Sbjct: 581 MWDVTPKSNLDWRGLEERV-KKGVRNSLLTALMPTASTAQICGSVEAFEPITSNLYSRRT 639
Query: 649 LSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQK 708
L+GEF VVN +L+ +L E G WS +KN+II + GS+QK+ I +KA+YKT W++ K
Sbjct: 640 LAGEFPVVNSYLVRELIERGTWSENMKNQIIANGGSIQKVIGIHPSVKAVYKTAWDLSMK 699
Query: 709 TLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIK 768
+++DMA DRG ++D +QS+N+ + QP +TS+ F+ W GLK+ YYLRS+ A+ AI
Sbjct: 700 SVIDMAADRGAFVDQTQSMNLFLAQPTLKNVTSMLFYGWKSGLKSLQYYLRSKPASSAIA 759
Query: 769 FTVDTSVL 776
TVDT +
Sbjct: 760 VTVDTECV 767
>gi|157953938|ref|YP_001498829.1| hypothetical protein AR158_C748R [Paramecium bursaria Chlorella
virus AR158]
gi|156068586|gb|ABU44293.1| hypothetical protein AR158_C748R [Paramecium bursaria Chlorella
virus AR158]
gi|448931537|gb|AGE55099.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus MA-1D]
gi|448934986|gb|AGE58538.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus NY-2B]
Length = 767
Score = 748 bits (1931), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 390/791 (49%), Positives = 524/791 (66%), Gaps = 52/791 (6%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSY---------------GLSIEHCDPVLVSQKVCT 45
M V+KRDG +E + FDKI R+++L + GLS+ D + VC
Sbjct: 10 MVVLKRDGSKENISFDKILQRIQRLCWPIDSKPVYKGSRAMTGLSV---DVSKIVASVCA 66
Query: 46 GVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHY 105
+ G++T QLDEL A+ +A+MTT HPDY LAARI VSNL K T + I D Y
Sbjct: 67 SIVDGISTVQLDELTADKSASMTTEHPDYGILAARISVSNLQKQTH----DKITDAYAEI 122
Query: 106 NERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVE 165
A L++DD + I K+A S I YDRD+D+DYFGFKT+ER YL KV K+VE
Sbjct: 123 -------AHLLSDDFKENIEKHADEYQSFIDYDRDYDFDYFGFKTMERLYLTKVNNKIVE 175
Query: 166 RPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKD 225
RPQH+ +RVA+G+ DI +TY +S R FTHASPTLFNAG +AQL+SCFLV + +
Sbjct: 176 RPQHVYLRVAIGLWGSDIARVKETYDALSCRKFTHASPTLFNAGFKKAQLASCFLVTV-E 234
Query: 226 DSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARY 285
DS+ IY L +CA +SK GG+G+++ IR GS I GTNG S+GIVPML+VF+ T+ Y
Sbjct: 235 DSLGDIYKVLGDCAQLSKHGGGLGINISEIRGRGSRINGTNGESDGIVPMLKVFDTTSAY 294
Query: 286 VDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSN 345
+QGG +RKG+FA+YLEP H D+ +FL +++N G+E RAR+LFYA+W+ DLFM+RV+++
Sbjct: 295 ANQGG-RRKGSFAIYLEPHHPDVMDFLLMKRNQGEESLRARNLFYAVWLNDLFMKRVETD 353
Query: 346 GLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYM 405
WSLF P+E PGL D +G E+ LY +YE EGKAK VV+A+++W ++ + IETG PY+
Sbjct: 354 AQWSLFDPSECPGLTDAFGDEYAELYERYEAEGKAKNVVKARDVWNTMVTTIIETGQPYV 413
Query: 406 LFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESH 465
KD NKK+ Q N GTI+ SNLC E+++YTS ETAVC + S+ L YV
Sbjct: 414 SNKDAVNKKNMQMNAGTIRGSNLCNEIVEYTSKEETAVCVIGSVVLKNYV---------- 463
Query: 466 PSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQ 525
KN FDF+ L + I+ +NL++ IDV YP++ A SN RPIG+GVQ
Sbjct: 464 ----------KNDKFDFDDLRKNVKILAKNLDRSIDVMSYPIKEAETSNKLRRPIGVGVQ 513
Query: 526 GLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGIL 585
GL D F L +PFDS+EA+ LN++IFE IYY A+ S E+A GPY T+ GSP SKGIL
Sbjct: 514 GLQDVFFKLKLPFDSSEARDLNREIFEHIYYAAVEASIELAEIHGPYPTFEGSPASKGIL 573
Query: 586 QPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYS 645
Q +W V P DW GL + + K GVRNSL+ A MPTAST+QI G+ E FEP TSN+YS
Sbjct: 574 QYHLWDVTPKSNLDWRGLEERV-KKGVRNSLVTALMPTASTAQICGSIEAFEPITSNLYS 632
Query: 646 RRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEI 705
RR L+GEF VVN +L+ +L E G WS +KN+II + GS+QK+ I +KA+YKT W++
Sbjct: 633 RRTLAGEFPVVNSYLVRELIERGTWSESMKNQIIANGGSIQKVIGIHPSVKAVYKTAWDL 692
Query: 706 KQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAAD 765
K+++DMA DRG ++D +QS+N+ + QP +TS+ F+ W GLKT YYLRS+ ++
Sbjct: 693 SMKSVIDMAADRGPFVDQTQSMNLFLAQPTLKNVTSMLFYGWKSGLKTLQYYLRSKPSSS 752
Query: 766 AIKFTVDTSVL 776
AI T+D L
Sbjct: 753 AIAVTIDNDCL 763
>gi|448930855|gb|AGE54419.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus IL-5-2s1]
Length = 767
Score = 747 bits (1929), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/791 (49%), Positives = 524/791 (66%), Gaps = 52/791 (6%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSY---------------GLSIEHCDPVLVSQKVCT 45
M V+KRDG +E + FDKI R+++L + GLS+ D + VC
Sbjct: 10 MVVLKRDGSKENISFDKILQRIQRLCWPIDSKPVYKGSRAMTGLSV---DVSKIVASVCA 66
Query: 46 GVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHY 105
+ G++T QLDEL A+ +A+MTT HPDY LAARI VSNL K T + I D Y
Sbjct: 67 SIVDGISTVQLDELTADKSASMTTEHPDYGILAARISVSNLQKQTH----DKITDAYAEI 122
Query: 106 NERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVE 165
A L++DD + I K+A S I YDRD+D+DYFGFKT+ER YL KV K+VE
Sbjct: 123 -------AHLLSDDFKENIEKHADEYQSFIDYDRDYDFDYFGFKTMERLYLTKVNNKIVE 175
Query: 166 RPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKD 225
RPQH+ +RVA+G+ DI +TY +S R FTHASPTLFNAG +AQL+SCFLV + +
Sbjct: 176 RPQHVYLRVAIGLWGSDIARVKETYDALSCRKFTHASPTLFNAGFKKAQLASCFLVTV-E 234
Query: 226 DSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARY 285
DS+ IY L +CA +SK GG+G+++ IR GS I GTNG S+GIVPML+VF+ T+ Y
Sbjct: 235 DSLGDIYKVLGDCAQLSKHGGGLGINISEIRGRGSRINGTNGESDGIVPMLKVFDTTSAY 294
Query: 286 VDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSN 345
+QGG +RKG+FA+YLEP H D+ +FL +++N G+E RAR+LFYA+W+ DLFM+RV+++
Sbjct: 295 ANQGG-RRKGSFAIYLEPHHPDVMDFLLMKRNQGEESLRARNLFYAVWLNDLFMKRVETD 353
Query: 346 GLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYM 405
WSLF P+E PGL D +G E+ LY +YE EGKAK VV+A+++W ++ + IETG PY+
Sbjct: 354 AQWSLFDPSECPGLTDAFGDEYAELYERYEAEGKAKNVVKARDVWNTMVTTIIETGQPYV 413
Query: 406 LFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESH 465
KD NKK+ Q N GTI+ SNLC E+++YTS ETAVC + S+ L YV
Sbjct: 414 SNKDAVNKKNMQMNAGTIRGSNLCNEIVEYTSKEETAVCVIGSVVLKNYV---------- 463
Query: 466 PSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQ 525
KN FDF+ L + I+ +NL++ IDV YP++ A SN RPIG+GVQ
Sbjct: 464 ----------KNDKFDFDDLRKNVKILAKNLDRSIDVMSYPIKEAETSNKLRRPIGVGVQ 513
Query: 526 GLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGIL 585
GL D F L +PFDS+EA+ LN++IFE IYY A+ S E+A GPY T+ GSP SKGIL
Sbjct: 514 GLQDVFFKLKLPFDSSEARDLNREIFEHIYYAAVEASIELAEIHGPYPTFEGSPASKGIL 573
Query: 586 QPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYS 645
Q +W V P DW GL + + K GVRNSL+ A MPTAST+QI G+ E FEP TSN+YS
Sbjct: 574 QYHLWDVTPKSNLDWRGLEERV-KKGVRNSLVTALMPTASTAQICGSIEAFEPITSNLYS 632
Query: 646 RRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEI 705
RR L+GEF VVN +L+ +L E G WS +KN+II + GS+QK+ I +KA+YKT W++
Sbjct: 633 RRTLAGEFPVVNSYLVRELIERGTWSESMKNQIIANGGSIQKVIGIHPSVKAVYKTAWDL 692
Query: 706 KQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAAD 765
K+++DMA DRG ++D +QS+N+ + P+ +TS+ F+ W GLKT YYLRS+ ++
Sbjct: 693 SMKSVIDMATDRGAFVDQTQSMNLFLAAPSLKNVTSMLFYGWKSGLKTLQYYLRSKPSSS 752
Query: 766 AIKFTVDTSVL 776
AI T+D L
Sbjct: 753 AIAVTIDNDCL 763
>gi|448933916|gb|AGE57471.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus NE-JV-4]
Length = 766
Score = 746 bits (1925), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/785 (49%), Positives = 525/785 (66%), Gaps = 46/785 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKL------------SYGLSIEHCDPVLVSQKVCTGVY 48
M V+KRDG +E + FDKI R+++L S ++ + D + VC +
Sbjct: 9 MVVLKRDGSKENISFDKILQRIQRLCWPVNSKPVYKGSRAMTGLNVDVSKIVASVCASIV 68
Query: 49 KGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNER 108
G++T QLDEL A+ +A+MTT HPDY LAARI VSNL K T + I D Y
Sbjct: 69 DGISTVQLDELTADKSASMTTEHPDYGILAARISVSNLQKQTH----DKITDAYAEI--- 121
Query: 109 SGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQ 168
A L+ +D + + K+A + + YDRD+D+DYFGFKT+ER YL KV K+VERPQ
Sbjct: 122 ----AHLLNEDFKENLEKHADEYQTLVDYDRDYDFDYFGFKTMERLYLTKVGDKIVERPQ 177
Query: 169 HMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSI 228
H+ +RVA+G+ DI +TY +S R FTHASPTLFN+G +AQL+SCFL+ + +DS+
Sbjct: 178 HVYLRVAIGLWGSDIAKVKETYDALSCRKFTHASPTLFNSGFKKAQLASCFLMTV-EDSL 236
Query: 229 EGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQ 288
IY L +CA +SK GG+G+++ +IR G+ I GTNG S+GIVPML+VF+ T+ Y +Q
Sbjct: 237 ADIYKALGDCAQLSKHGGGLGINISDIRGRGAMINGTNGESDGIVPMLKVFDTTSAYANQ 296
Query: 289 GGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLW 348
GG +RKG+FA+YLEP H DI +FL +++N G+E RAR+LFYA+W+ DLFM+RV+++ W
Sbjct: 297 GG-RRKGSFAIYLEPHHPDIMDFLLMKRNQGEESLRARNLFYAVWLNDLFMKRVETDAQW 355
Query: 349 SLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFK 408
SLF P+E PGL D +G E+ LYT+YE EGKAK VV+A+++W ++ + IETG PY+ K
Sbjct: 356 SLFDPSECPGLTDAFGDEYAELYTRYEAEGKAKNVVKARDVWNTMVTTIIETGQPYVANK 415
Query: 409 DTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSK 468
D NKK+ Q N GTI+ SNLC E+++YTS ETAVC + S+ L YV
Sbjct: 416 DAVNKKNMQSNAGTIRGSNLCIEILEYTSKEETAVCVIGSVVLKNYV------------- 462
Query: 469 LVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLA 528
KN FDF+ L + I+ +NL++ IDV YP++ A SN R RPIG+GVQGL
Sbjct: 463 -------KNDKFDFDDLRKNVKILAKNLDRSIDVMSYPIKEAETSNKRRRPIGVGVQGLQ 515
Query: 529 DTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPD 588
D F L +PFDS EA+ LN++IFE IYY A+ S E+A GP+ T+ GSP SKGILQ
Sbjct: 516 DVFFKLKLPFDSPEARDLNREIFEHIYYAAVEASVELAEIHGPHPTFEGSPASKGILQYH 575
Query: 589 MWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRV 648
+W V P DW GL + + K GVRNSLL A MPTAST+QI G+ E FEP TSN+YSRR
Sbjct: 576 LWDVTPKSNLDWRGLEERV-KKGVRNSLLTALMPTASTAQICGSVEAFEPITSNLYSRRT 634
Query: 649 LSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQK 708
L+GEF VVN +L+ +L E G WS +KN+II + GS+QK+ I +KA+YKT W++ K
Sbjct: 635 LAGEFPVVNSYLVRELIERGTWSENMKNQIIANGGSIQKVIGIHPSVKAVYKTAWDLSMK 694
Query: 709 TLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIK 768
+++DMA DRG ++D +QS+N+ + QP+ +TS+ F+ W GLK+ YYLRS+ A+ AI
Sbjct: 695 SVIDMAADRGAFVDQTQSMNLFLAQPSLKNVTSMLFYGWKSGLKSLQYYLRSKPASSAIA 754
Query: 769 FTVDT 773
TVDT
Sbjct: 755 VTVDT 759
>gi|448931908|gb|AGE55469.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus MA-1E]
Length = 766
Score = 746 bits (1925), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/788 (48%), Positives = 525/788 (66%), Gaps = 46/788 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKL------------SYGLSIEHCDPVLVSQKVCTGVY 48
M V+KRDG +E + FDKI R+++L S ++ + D + VC +
Sbjct: 9 MVVLKRDGSKENISFDKILQRIQRLCWPVNSKPVYKGSRAMTGLNVDVSKIVASVCASIV 68
Query: 49 KGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNER 108
G++T QLDEL A+ +A+MTT HPDY LAARI VSNL K T + I D Y
Sbjct: 69 DGISTVQLDELTADKSASMTTEHPDYGILAARISVSNLQKQTH----DKITDAYAEI--- 121
Query: 109 SGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQ 168
A L+ +D + + K+A + + YDRD+D+DYFGFKT+ER YL KV K+VERPQ
Sbjct: 122 ----AHLLNEDFKENLEKHADEYQALVDYDRDYDFDYFGFKTMERLYLTKVGDKIVERPQ 177
Query: 169 HMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSI 228
H+ +RVA+G+ DI +TY +S R FTHASPTLFN+G +AQL+SCFL+ + +DS+
Sbjct: 178 HVYLRVAIGLWGSDIAKVKETYDALSCRKFTHASPTLFNSGFKKAQLASCFLMTV-EDSL 236
Query: 229 EGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQ 288
IY L +CA +SK GG+G+++ +IR G+ I GTNG S+GIVPML+VF+ T+ Y +Q
Sbjct: 237 ADIYKALGDCAQLSKHGGGLGINISDIRGRGAMINGTNGESDGIVPMLKVFDTTSAYANQ 296
Query: 289 GGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLW 348
GG +RKG+FA+YLEP H DI +FL +++N G+E RAR+LFYA+W+ DLFM+RV+++ W
Sbjct: 297 GG-RRKGSFAIYLEPHHPDIMDFLLMKRNQGEESLRARNLFYAVWLNDLFMKRVETDAQW 355
Query: 349 SLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFK 408
SLF P+E PGL D +G E+ LYT+YE EGKAK VV+A+++W ++ + IETG PY+ K
Sbjct: 356 SLFDPSECPGLTDAFGDEYAELYTRYEAEGKAKNVVKARDVWNTMVTTIIETGQPYVANK 415
Query: 409 DTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSK 468
D NKK+ Q N GTI+ SNLC E+++YTS ETAVC + S+ L YV
Sbjct: 416 DAVNKKNMQSNAGTIRGSNLCIEILEYTSKEETAVCVIGSVVLKNYV------------- 462
Query: 469 LVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLA 528
KN FDF+ L + I+ +NL++ IDV YP++ A SN R RPIG+GVQGL
Sbjct: 463 -------KNDKFDFDDLRKNVKILAKNLDRSIDVMSYPIKEAETSNKRRRPIGVGVQGLQ 515
Query: 529 DTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPD 588
D F L +PFDS EA+ LN++IFE IYY A+ S E+A GP+ T+ GSP SKGILQ
Sbjct: 516 DVFFKLKLPFDSPEARDLNREIFEHIYYAAVEASVELAEIHGPHPTFEGSPASKGILQYH 575
Query: 589 MWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRV 648
+W V P DW GL + + K GVRNSLL A MPTAST+QI G+ E FEP TSN+YSRR
Sbjct: 576 LWDVTPKSNLDWRGLEERV-KKGVRNSLLTALMPTASTAQICGSVEAFEPITSNLYSRRT 634
Query: 649 LSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQK 708
L+GEF VVN +L+ +L E G WS +KN+II + GS+QK+ I +KA+YKT W++ K
Sbjct: 635 LAGEFPVVNSYLVRELIERGTWSENMKNQIIANGGSIQKVIGIHPSVKAVYKTAWDLSMK 694
Query: 709 TLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIK 768
+++DMA DRG ++D +QS+N+ + QP +TS+ F+ W GLK+ YYLRS+ A+ AI
Sbjct: 695 SVIDMATDRGAFVDQTQSMNLFLAQPTLKNVTSMLFYGWKSGLKSLQYYLRSKPASSAIA 754
Query: 769 FTVDTSVL 776
TVDT +
Sbjct: 755 VTVDTECV 762
>gi|451927339|gb|AGF85217.1| reductase large subunit [Moumouvirus goulette]
Length = 847
Score = 745 bits (1924), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 354/721 (49%), Positives = 499/721 (69%), Gaps = 25/721 (3%)
Query: 63 TAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYD 122
++ M +H DY A I+++NLH+NT + + + + M + NE +G+ AP+++ + Y
Sbjct: 103 SSTEMLADHYDYPKTAVYILINNLHENTHEDYFKVVSIMRRNINE-NGIHAPIVSKNFYK 161
Query: 123 IIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIH--K 180
+ KN +++ + Y+RD+D FG++TLERSYL K G ++ERPQH+ MRVA+ +H
Sbjct: 162 FVQKNYKKINEQFKYERDYDMSIFGYRTLERSYLKKCNGVIIERPQHLWMRVAITLHYRT 221
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
D+ +TY M+S+ +FTHA+PTLFN+GTP QLSSCFL+ +KDD + + D+ K+CAI
Sbjct: 222 GDLSKIFETYEMLSEGYFTHATPTLFNSGTPFEQLSSCFLMGVKDD-MASLGDSWKDCAI 280
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK +GGIG+++ N+R G+YI T GTSNG+ +L ++ND ARY +QGG KR G+FA++
Sbjct: 281 ISKFSGGIGINMSNVRVEGAYINSTQGTSNGL-RVLSIYNDIARYANQGG-KRAGSFAIF 338
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
+EPWH DIF FLDL+KN G E R RDLF L + ++FM+RV+ + WSL CP++ P +
Sbjct: 339 IEPWHGDIFFFLDLKKNTGAETERTRDLFLGLMINNIFMDRVEKDEKWSLMCPSQCPDIV 398
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+G EF + Y KYE EGK K ++A+ LWF+I+++QIETG PY+L+KD N+KSNQ N+
Sbjct: 399 GKYGEEFNKAYLKYETEGKFTKQIKARELWFKIMETQIETGVPYILYKDAINEKSNQINI 458
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
G I SNLCTE+++Y+S E AVCNL+SI LP+++ + P F
Sbjct: 459 GVINGSNLCTEIVEYSSADEYAVCNLSSICLPKFI----IHDNDSPK------------F 502
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D++KL ++ I+T NLN IID+NYYPV+ SNLRHRPIGIGVQGLAD F L PFDS
Sbjct: 503 DYDKLYKIARIITRNLNNIIDINYYPVDKTLVSNLRHRPIGIGVQGLADVFALFKTPFDS 562
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP---SDR 597
A+ LN+ IFETIY+ A+ S ++A GPYET+ GSP+SKG Q D+W ++ S
Sbjct: 563 DIARDLNRKIFETIYFGAMTESLQMAKEFGPYETFWGSPLSKGKFQFDLWNISANKLSGM 622
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
WDW LR I +GVRNSL MPTASTSQI G NEC EP+T NIYSR L+G++ V+N
Sbjct: 623 WDWETLRKEIMIHGVRNSLTTTCMPTASTSQIKGYNECIEPFTENIYSRSTLAGDYYVIN 682
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
K+L+ DL E+GLW+ + + I Y GS+ I IP+ +K IY+TVWEI QK++++MA DR
Sbjct: 683 KYLIQDLMELGLWNSDMVDLIKYYQGSIANISTIPQNIKEIYRTVWEIPQKSIIEMAADR 742
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
++D +QS+NI +++P+F KL S F+A+ GLKTGMYYLR + A+ A +F +D +K
Sbjct: 743 APFVDQTQSMNIFIEKPDFIKLNSCLFYAYRLGLKTGMYYLRGKPASSANQFGIDIEKIK 802
Query: 778 E 778
E
Sbjct: 803 E 803
>gi|448935365|gb|AGE58916.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus NYs1]
Length = 767
Score = 745 bits (1923), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/791 (49%), Positives = 523/791 (66%), Gaps = 52/791 (6%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSY---------------GLSIEHCDPVLVSQKVCT 45
M V+KRDG +E + FDKI R+++L + GLS+ D + VC
Sbjct: 10 MVVLKRDGSKENISFDKILQRIQRLCWPIDSKPVYKGSRAMTGLSV---DVSKIVASVCA 66
Query: 46 GVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHY 105
+ G++T QLDEL A+ +A+MTT HPDY LAARI VSNL K T + I D Y
Sbjct: 67 SIVDGISTVQLDELTADKSASMTTEHPDYGILAARISVSNLQKQTH----DKITDAYAEI 122
Query: 106 NERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVE 165
A L++DD + I K+A S I YDRD+D+DYFGFKT+ER YL KV K+VE
Sbjct: 123 -------AHLLSDDFKENIEKHADEYQSFIDYDRDYDFDYFGFKTMERLYLTKVNNKIVE 175
Query: 166 RPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKD 225
RPQH+ +RVA+G+ DI +TY +S R FTHASPTLFNAG +AQL+SCFLV + +
Sbjct: 176 RPQHVYLRVAIGLWGSDIARVKETYDALSCRKFTHASPTLFNAGFKKAQLASCFLVTV-E 234
Query: 226 DSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARY 285
DS+ IY L +CA +SK GG+G+++ IR GS I GTNG S+GIVPML+VF+ T+ Y
Sbjct: 235 DSLGDIYKVLGDCAQLSKHGGGLGINISEIRGRGSRINGTNGESDGIVPMLKVFDTTSAY 294
Query: 286 VDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSN 345
+QGG +RKG+FA+YLEP H D+ +FL +++N G+E RAR+LFYA+W+ DLFM+RV+++
Sbjct: 295 ANQGG-RRKGSFAIYLEPHHPDVMDFLLMKRNQGEESLRARNLFYAVWLNDLFMKRVETD 353
Query: 346 GLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYM 405
WSLF P+E PGL D +G E+ LY +YE EGKAK VV+A+++W ++ + IETG PY+
Sbjct: 354 AQWSLFDPSECPGLTDAFGDEYAELYERYEAEGKAKNVVKARDVWNTMVTTIIETGQPYV 413
Query: 406 LFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESH 465
KD NKK+ Q N GTI+ SNLC E+++YTS ETAVC + S+ L YV
Sbjct: 414 SNKDAVNKKNMQMNAGTIRGSNLCNEIVEYTSKEETAVCVIGSVVLKNYV---------- 463
Query: 466 PSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQ 525
KN FDF+ L + I+ +NL++ IDV YP++ A SN RPIG+GVQ
Sbjct: 464 ----------KNDKFDFDDLRKNVKILAKNLDRSIDVMSYPIKEAETSNKLRRPIGVGVQ 513
Query: 526 GLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGIL 585
GL D F L +PFDS+EA+ LN++IFE IYY A+ S E+A PY T+ GSP SKGIL
Sbjct: 514 GLQDVFFKLKLPFDSSEARDLNREIFEHIYYAAVEASIELAEIHDPYPTFEGSPASKGIL 573
Query: 586 QPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYS 645
Q +W V P DW GL + + K GVRNSL+ A MPTAST+QI G+ E FEP TSN+YS
Sbjct: 574 QYHLWDVTPKSNLDWRGLEERV-KKGVRNSLVTALMPTASTAQICGSIEAFEPITSNLYS 632
Query: 646 RRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEI 705
RR L+GEF VVN +L+ +L E G WS +KN+II + GS+QK+ I +KA+YKT W++
Sbjct: 633 RRTLAGEFPVVNSYLVRELIERGTWSESMKNQIIANGGSIQKVIGIHPSVKAVYKTAWDL 692
Query: 706 KQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAAD 765
K+++DMA DRG ++D +QS+N+ + QP +TS+ F+ W GLKT YYLRS+ ++
Sbjct: 693 SMKSVIDMAADRGPFVDQTQSMNLFLAQPTLKNVTSMLFYGWKSGLKTLQYYLRSKPSSS 752
Query: 766 AIKFTVDTSVL 776
AI T+D L
Sbjct: 753 AIAVTIDNDCL 763
>gi|27882097|gb|AAH44356.1| Rrm1 protein [Danio rerio]
Length = 498
Score = 745 bits (1923), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/517 (66%), Positives = 419/517 (81%), Gaps = 19/517 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG+QE V FDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNSDFVDPTQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA +TT HPDYA LAARI VSNLHK TKK FSE ++D+YN+ N + +P+I+ +
Sbjct: 61 AEIAATLTTKHPDYAILAARIAVSNLHKETKKVFSEVMEDLYNYVNPLNSRHSPMISKET 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI++ N RL+S IIYDRDF Y++FGFKTLERSYLLK+ GKV ERPQHMLMRV+VGIHK
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNFFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI +AI+TY+++S++WFTHASPTLFNAGT R QLSSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIAAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLAMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAMY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIF+FL+L+KN GKEE RARDLFYALW+PDLFM+RV++NG WSL CPN+ PGL
Sbjct: 301 LEPWHFDIFDFLELKKNTGKEEQRARDLFYALWIPDLFMKRVETNGDWSLMCPNDCPGLD 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+CWG EFE+LY KYE+EG+AK+VV+AQ LW+ I++SQ ETGTPYML+KD CN+KSNQQNL
Sbjct: 361 ECWGEEFEKLYAKYEQEGRAKRVVKAQQLWYAIIESQTETGTPYMLYKDACNRKSNQQNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YTS E AVCNLASIAL YV + R F
Sbjct: 421 GTIKCSNLCTEIVEYTSADEVAVCNLASIALNMYV-------------------TSERTF 461
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRH 517
DF+KLA VT ++ +NLNKIID+NYYPV+ RS H
Sbjct: 462 DFQKLASVTKVIVKNLNKIIDINYYPVKDGCRSRSLH 498
>gi|197247241|gb|AAI65359.1| Rrm1 protein [Danio rerio]
Length = 509
Score = 745 bits (1923), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/517 (66%), Positives = 419/517 (81%), Gaps = 19/517 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG+QE V FDKIT+R++KL YGL+ + DP ++ KV G+Y GVTT +LD LA
Sbjct: 12 MHVIKRDGRQERVMFDKITSRIQKLCYGLNSDFVDPTQITMKVIQGLYSGVTTVELDTLA 71
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA +TT HPDYA LAARI VSNLHK TKK FSE ++D+YN+ N + +P+I+ +
Sbjct: 72 AEIAATLTTKHPDYAILAARIAVSNLHKETKKVFSEVMEDLYNYVNPLNSRHSPMISKET 131
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI++ N RL+S IIYDRDF Y++FGFKTLERSYLLK+ GKV ERPQHMLMRV+VGIHK
Sbjct: 132 LDIVLANKDRLNSAIIYDRDFSYNFFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHK 191
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DI +AI+TY+++S++WFTHASPTLFNAGT R QLSSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 192 EDIAAAIETYNLLSEKWFTHASPTLFNAGTNRPQLSSCFLLAMKDDSIEGIYDTLKQCAL 251
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR GAFA+Y
Sbjct: 252 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAMY 311
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIF+FL+L+KN GKEE RARDLFYALW+PDLFM+RV++NG WSL CPN+ PGL
Sbjct: 312 LEPWHFDIFDFLELKKNTGKEEQRARDLFYALWIPDLFMKRVETNGDWSLMCPNDCPGLD 371
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+CWG EFE+LY KYE+EG+AK+VV+AQ LW+ I++SQ ETGTPYML+KD CN+KSNQQNL
Sbjct: 372 ECWGEEFEKLYAKYEQEGRAKRVVKAQQLWYAIIESQTETGTPYMLYKDACNRKSNQQNL 431
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YTS E AVCNLASIAL YV + R F
Sbjct: 432 GTIKCSNLCTEIVEYTSADEVAVCNLASIALNMYV-------------------TSERTF 472
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRH 517
DF+KLA VT ++ +NLNKIID+NYYPV+ RS H
Sbjct: 473 DFQKLASVTKVIVKNLNKIIDINYYPVKDGCRSRSLH 509
>gi|448931166|gb|AGE54729.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus KS1B]
Length = 766
Score = 743 bits (1918), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/785 (48%), Positives = 524/785 (66%), Gaps = 46/785 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKL------------SYGLSIEHCDPVLVSQKVCTGVY 48
M V+KRDG +E + FDKI R+++L S ++ + D + VC +
Sbjct: 9 MVVLKRDGSKENISFDKILQRIQRLCWPVNSKPVYKGSRAMTGLNVDVSKIVASVCASIV 68
Query: 49 KGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNER 108
G++T QLDEL A+ +A+MTT HPDY LAARI VSNL K T + I D Y
Sbjct: 69 DGISTVQLDELTADKSASMTTEHPDYGILAARISVSNLQKQTH----DKITDAYAEI--- 121
Query: 109 SGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQ 168
A L+ +D + + K+A + + YDRD+D+DYFGFKT+ER YL KV K+VERPQ
Sbjct: 122 ----AHLLNEDFKENLEKHADEYQTLVDYDRDYDFDYFGFKTMERLYLTKVGDKIVERPQ 177
Query: 169 HMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSI 228
H+ +RVA+G+ DI +TY +S R FTHASPTLFN+G +AQL+SCFL+ + +DS+
Sbjct: 178 HVYLRVAIGLWGSDIAKVKETYDALSCRKFTHASPTLFNSGFKKAQLASCFLMTV-EDSL 236
Query: 229 EGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQ 288
IY L +CA +SK GG+G+++ +IR G+ I GTNG S+GIVPML+VF+ T+ Y +Q
Sbjct: 237 ADIYKALGDCAQLSKHGGGLGINISDIRGRGAMINGTNGESDGIVPMLKVFDTTSAYANQ 296
Query: 289 GGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLW 348
GG +RKG+FA+YLEP H DI +FL +++N G+E RAR+LFYA+W+ DLFM+RV+++ W
Sbjct: 297 GG-RRKGSFAIYLEPHHPDIMDFLLMKRNQGEESLRARNLFYAVWLNDLFMKRVETDAQW 355
Query: 349 SLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFK 408
SLF P+E PGL D +G E+ LYT+YE EGKAK VV+A+++W ++ + IETG PY+ K
Sbjct: 356 SLFDPSECPGLTDAFGDEYAELYTRYEAEGKAKNVVKARDVWNTMVTTIIETGQPYVANK 415
Query: 409 DTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSK 468
D NKK+ Q N GTI+ SNLC E+++YTS ETAVC + S+ L YV
Sbjct: 416 DAVNKKNMQSNAGTIRGSNLCIEILEYTSKEETAVCVIGSVVLKNYV------------- 462
Query: 469 LVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLA 528
KN FDF+ L + I+ +NL++ IDV YP++ A SN RPIG+GVQGL
Sbjct: 463 -------KNDKFDFDDLRKNVKILAKNLDRSIDVMSYPIKEAETSNKLRRPIGVGVQGLQ 515
Query: 529 DTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPD 588
D F L +PFDS EA+ LN++IFE IYY A+ S E+A GP+ T+ GSP SKGILQ
Sbjct: 516 DVFFKLKLPFDSPEARDLNREIFEHIYYAAVEASVELAEIHGPHATFEGSPASKGILQYH 575
Query: 589 MWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRV 648
+W V P DW GL + + K GVRNSLL A MPTAST+QI G+ E FEP TSN+YSRR
Sbjct: 576 LWDVTPQSNLDWRGLEERV-KKGVRNSLLTALMPTASTAQICGSVEAFEPITSNLYSRRT 634
Query: 649 LSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQK 708
L+GEF VVN +L+ +L E G WS +KN+II + GS+QK+ I +KA+YKT W++ K
Sbjct: 635 LAGEFPVVNSYLVRELIERGTWSENMKNQIIANGGSIQKVIGIHPSVKAVYKTAWDLSMK 694
Query: 709 TLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIK 768
+++DMA DRG ++D +QS+N+ + QP+ +TS+ F+ W GLK+ YYLRS+ A+ AI
Sbjct: 695 SVIDMAADRGAFVDQTQSMNLFLAQPSLKNVTSMLFYGWKSGLKSLQYYLRSKPASSAIA 754
Query: 769 FTVDT 773
TVDT
Sbjct: 755 VTVDT 759
>gi|448929110|gb|AGE52679.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus CvsA1]
Length = 766
Score = 743 bits (1918), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 385/785 (49%), Positives = 526/785 (67%), Gaps = 46/785 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKL------------SYGLSIEHCDPVLVSQKVCTGVY 48
M V+KRDG +E + FDKI R+++L S ++ + D + VC +
Sbjct: 9 MVVLKRDGSKENISFDKILQRIQRLCWPVNSKPVYKGSRAMTGLNVDVSKIVASVCASIV 68
Query: 49 KGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNER 108
G++T QLDEL A+ +A+MTT HPDY LAARI VSNL K T + I D Y
Sbjct: 69 DGISTVQLDELTADKSASMTTEHPDYGILAARISVSNLQKQTH----DKITDAY------ 118
Query: 109 SGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQ 168
+G+ A L+ +D + + K+A + + YDRD+D+DYFGFKT+ER YL KV K+VERPQ
Sbjct: 119 AGI-AHLLNEDFKENLEKHADEYQALVDYDRDYDFDYFGFKTMERLYLTKVGDKIVERPQ 177
Query: 169 HMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSI 228
H+ +RVA+G+ DI +TY +S R FTHASPTLFN+G +AQL+SCFL+ + +DS+
Sbjct: 178 HVYLRVAIGLWGSDIAKVKETYDALSCRKFTHASPTLFNSGFKKAQLASCFLMTV-EDSL 236
Query: 229 EGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQ 288
IY L +CA +SK GG+G+++ +IR G+ I GTNG S+GIVPML+VF+ T+ Y +Q
Sbjct: 237 ADIYKALGDCAQLSKHGGGLGINISDIRGRGAMINGTNGESDGIVPMLKVFDTTSAYANQ 296
Query: 289 GGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLW 348
GG +RKG+FA+YLEP H DI +FL +++N G+E RAR+LFYA+W+ DLFM+RV+++ W
Sbjct: 297 GG-RRKGSFAIYLEPHHPDIMDFLLMKRNQGEESLRARNLFYAVWLNDLFMKRVETDAQW 355
Query: 349 SLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFK 408
SLF P+E PGL D +G E+ LYT+YE EGKAK VV+A+++W ++ + IETG PY+ K
Sbjct: 356 SLFDPSECPGLTDAFGDEYAELYTRYEAEGKAKNVVKARDVWNTMVTTIIETGQPYVANK 415
Query: 409 DTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSK 468
D NKK+ Q N GTI+ SNLC E+++YTS ETAVC + S+ L YV
Sbjct: 416 DAVNKKNMQSNAGTIRGSNLCIEILEYTSKEETAVCVIGSVVLKNYV------------- 462
Query: 469 LVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLA 528
KN FDF+ L + I+ +NL++ IDV YP++ A SN RPIG+GVQGL
Sbjct: 463 -------KNDKFDFDDLRKNVKILAKNLDRSIDVMSYPIKEAETSNKMRRPIGVGVQGLQ 515
Query: 529 DTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPD 588
D F L +PFDS EA+ LN++IFE IYY A+ S E+A GP+ T+ GSP SKGILQ
Sbjct: 516 DVFFKLKLPFDSPEARDLNREIFEHIYYAAVEASVELAEIHGPHPTFEGSPASKGILQYH 575
Query: 589 MWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRV 648
+W V P DW GL + + K GVRNSLL A MPTAST+QI G+ E FEP TSN+YSRR
Sbjct: 576 LWDVTPKSNLDWRGLEERV-KKGVRNSLLTALMPTASTAQICGSVEAFEPITSNLYSRRT 634
Query: 649 LSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQK 708
L+GEF VVN +L+ +L E G WS +KN+II + GS+QK+ I +KA+YKT W++ K
Sbjct: 635 LAGEFPVVNSYLVRELIERGTWSENMKNQIIANGGSIQKVIGIHPSVKAVYKTAWDLSMK 694
Query: 709 TLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIK 768
+++DMA DRG ++D +QS+N+ + QP +TS+ F+ W GLK+ YYLRS+ A+ AI
Sbjct: 695 SVIDMAADRGAFVDQTQSMNLFLAQPTLKNVTSMLFYGWKSGLKSLQYYLRSKPASSAIA 754
Query: 769 FTVDT 773
TVDT
Sbjct: 755 VTVDT 759
>gi|448925052|gb|AGE48633.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus AN69C]
gi|448930475|gb|AGE54040.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus IL-3A]
Length = 766
Score = 743 bits (1917), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/785 (48%), Positives = 524/785 (66%), Gaps = 46/785 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKL------------SYGLSIEHCDPVLVSQKVCTGVY 48
M V+KRDG +E + FDKI R+++L S ++ + D + VC +
Sbjct: 9 MVVLKRDGSKENISFDKILQRIQRLCWPVNSKPVYKGSRAMTGLNVDVSKIVASVCASIV 68
Query: 49 KGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNER 108
G++T QLDEL A+ +A+MTT HPDY LAARI VSNL K T + I D Y
Sbjct: 69 DGISTVQLDELTADKSASMTTEHPDYGILAARISVSNLQKQTH----DKITDAYAEI--- 121
Query: 109 SGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQ 168
A L+ +D + + K+A + + YDRD+D+DYFGFKT+ER YL KV K+VERPQ
Sbjct: 122 ----AHLLNEDFKENLEKHADEYQTLVDYDRDYDFDYFGFKTMERLYLTKVGDKIVERPQ 177
Query: 169 HMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSI 228
H+ +RVA+G+ DI +TY +S R FTHASPTLFN+G +AQL+SCFL+ + +DS+
Sbjct: 178 HVYLRVAIGLWGSDIAKVKETYDALSCRKFTHASPTLFNSGFKKAQLASCFLMTV-EDSL 236
Query: 229 EGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQ 288
IY L +CA +SK GG+G+++ +IR G+ I GTNG S+GIVPML+VF+ T+ Y +Q
Sbjct: 237 ADIYKALGDCAQLSKHGGGLGINISDIRGRGAMINGTNGESDGIVPMLKVFDTTSAYANQ 296
Query: 289 GGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLW 348
GG +RKG+FA+YLEP H DI +FL +++N G+E RAR+LFYA+W+ DLFM+RV+++ W
Sbjct: 297 GG-RRKGSFAIYLEPHHPDIMDFLLMKRNQGEESLRARNLFYAVWLNDLFMKRVETDAQW 355
Query: 349 SLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFK 408
SLF P+E PGL D +G E+ LYT+YE EGKAK VV+A+++W ++ + IETG PY+ K
Sbjct: 356 SLFDPSECPGLTDAFGDEYAELYTRYEAEGKAKNVVKARDVWNTMVTTIIETGQPYVANK 415
Query: 409 DTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSK 468
D NKK+ Q N GTI+ SNLC E+++YTS ETAVC + S+ L YV
Sbjct: 416 DAVNKKNMQSNAGTIRGSNLCIEILEYTSKEETAVCVIGSVVLKNYV------------- 462
Query: 469 LVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLA 528
KN FDF+ L + I+ +NL++ IDV YP++ A SN RPIG+GVQGL
Sbjct: 463 -------KNDKFDFDDLRKNVKILAKNLDRSIDVMSYPIKEAETSNKLRRPIGVGVQGLQ 515
Query: 529 DTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPD 588
D F L +PFDS EA+ LN++IFE IYY A+ S E+A GP+ T+ GSP SKGILQ
Sbjct: 516 DVFFKLKLPFDSPEARDLNREIFEHIYYAAVEASVELAEIHGPHPTFEGSPASKGILQYH 575
Query: 589 MWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRV 648
+W V P DW GL + + K GVRNSLL A MPTAST+QI G+ E FEP TSN+YSRR
Sbjct: 576 LWDVTPQSNLDWRGLEERV-KKGVRNSLLTALMPTASTAQICGSVEAFEPITSNLYSRRT 634
Query: 649 LSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQK 708
L+GEF VVN +L+ +L E G WS +KN+II + GS+QK+ I +KA+YKT W++ K
Sbjct: 635 LAGEFPVVNSYLVRELIERGTWSENMKNQIIANGGSIQKVIGIHPSVKAVYKTAWDLSMK 694
Query: 709 TLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIK 768
+++DMA DRG ++D +QS+N+ + QP+ +TS+ F+ W GLK+ YYLRS+ A+ AI
Sbjct: 695 SVIDMAADRGAFVDQTQSMNLFLAQPSLKNVTSMLFYGWKSGLKSLQYYLRSKPASSAIA 754
Query: 769 FTVDT 773
TVDT
Sbjct: 755 VTVDT 759
>gi|448928094|gb|AGE51666.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus CviKI]
Length = 766
Score = 742 bits (1915), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 384/785 (48%), Positives = 523/785 (66%), Gaps = 46/785 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKL------------SYGLSIEHCDPVLVSQKVCTGVY 48
M V+KRDG +E + FDKI R+++L S ++ + D + VC +
Sbjct: 9 MVVLKRDGSKENISFDKILQRIQRLCWPVNSKPVYKGSRAMTGLNVDVSKIVASVCASIV 68
Query: 49 KGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNER 108
G++T QLDEL A+ +A+MTT HPDY LAARI VSNL K T + I D Y
Sbjct: 69 DGISTVQLDELTADKSASMTTEHPDYGILAARISVSNLQKQTH----DKITDAYAEI--- 121
Query: 109 SGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQ 168
A L+ +D + + K+A + + YDRD+D+DYFGFKT+ER YL KV K+VERPQ
Sbjct: 122 ----AHLLNEDFKENLEKHADEYQALVDYDRDYDFDYFGFKTMERLYLTKVGDKIVERPQ 177
Query: 169 HMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSI 228
H+ +RVA+G+ DI +TY +S R FTHASPTLFN+G +AQL+SCFL+ + +DS+
Sbjct: 178 HVYLRVAIGLWGSDIAKVKETYDALSCRKFTHASPTLFNSGFKKAQLASCFLMTV-EDSL 236
Query: 229 EGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQ 288
IY L +CA +SK GG+G+++ +IR G+ I GTNG S+GIVPML+VF+ T+ Y +Q
Sbjct: 237 ADIYKALGDCAQLSKHGGGLGINISDIRGRGAMINGTNGESDGIVPMLKVFDTTSAYANQ 296
Query: 289 GGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLW 348
GG +RKG+FA+YLEP H DI +FL +++N G+E RAR+LFYA+W+ DLFM+RV+++ W
Sbjct: 297 GG-RRKGSFAIYLEPHHPDIMDFLLMKRNQGEESLRARNLFYAVWLNDLFMKRVETDAQW 355
Query: 349 SLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFK 408
SLF P+E PGL D +G E+ LYT+YE EGKAK VV+A+++W ++ + IETG PY+ K
Sbjct: 356 SLFDPSECPGLTDAFGDEYAELYTRYEAEGKAKNVVKARDVWNTMVTTIIETGQPYVANK 415
Query: 409 DTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSK 468
D NKK+ Q N GTI+ SNLC E+++YTS ETAVC + S+ L YV
Sbjct: 416 DAVNKKNMQSNAGTIRGSNLCIEILEYTSKEETAVCVIGSVVLKNYV------------- 462
Query: 469 LVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLA 528
KN FDF+ L + I+ +NL++ IDV YP++ A SN RPIG+GVQGL
Sbjct: 463 -------KNDKFDFDDLRKNVKILAKNLDRSIDVMSYPIKEAETSNKLRRPIGVGVQGLQ 515
Query: 529 DTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPD 588
D F L +PFDS EA+ LN++IFE IYY A+ S E+A GP+ T+ GSP SKGILQ
Sbjct: 516 DVFFKLKLPFDSPEARDLNREIFEHIYYAAVEASVELAEIHGPHPTFEGSPASKGILQYH 575
Query: 589 MWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRV 648
+W V P DW GL + K GVRNSLL A MPTAST+QI G+ E FEP TSN+YSRR
Sbjct: 576 LWDVTPKSNLDWRGLEKRV-KKGVRNSLLTALMPTASTAQICGSVEAFEPITSNLYSRRT 634
Query: 649 LSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQK 708
L+GEF VVN +L+ +L E G WS +KN+II + GS+QK+ I +KA+YKT W++ K
Sbjct: 635 LAGEFPVVNSYLVRELIERGTWSENMKNQIIANGGSIQKVIGIHPSVKAVYKTAWDLSMK 694
Query: 709 TLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIK 768
+++DMA DRG ++D +QS+N+ + QP+ +TS+ F+ W GLK+ YYLRS+ A+ AI
Sbjct: 695 SVIDMAADRGAFVDQTQSMNLFLAQPSLKNVTSMLFYGWKSGLKSLQYYLRSKPASSAIA 754
Query: 769 FTVDT 773
TVDT
Sbjct: 755 VTVDT 759
>gi|401665770|gb|AFP95882.1| ribonucleotide reductase large subunit [Mamestra brassicae MNPV]
Length = 676
Score = 738 bits (1906), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/689 (50%), Positives = 484/689 (70%), Gaps = 33/689 (4%)
Query: 86 LHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDY 145
+HK +SF++ ++ ++ H L++D++ + +K++ ++ I D DY+Y
Sbjct: 1 MHKYVDESFTKVVQRLHKH---------NLVSDELLSVTIKHSKIIEENIDMKLDLDYNY 51
Query: 146 FGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTL 205
FG++TL+ YL+K+ KV ER QHM MR+A+GI DDIDSAIK+Y +S++ +THASPT+
Sbjct: 52 FGYQTLKNGYLIKINEKVAERIQHMHMRIALGIFGDDIDSAIKSYKFLSRKMYTHASPTM 111
Query: 206 FNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGT 265
F AGT Q+SSCFL+ M+ DSI GIY+TL +CA+ISK GGIG++V+++R S I+ T
Sbjct: 112 FAAGTLTPQMSSCFLLTMESDSIRGIYNTLNDCAMISKHGGGIGLNVNSVRGRNSKIKST 171
Query: 266 NGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRA 325
NGT++G++PMLRVFN+ R+VDQGG KRKGA AVY+EPWH DI + L +R+N G E+ +A
Sbjct: 172 NGTASGLLPMLRVFNNMVRHVDQGG-KRKGAQAVYVEPWHCDIMDVLHMRRNIGSEDTKA 230
Query: 326 RDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQ 385
RDL ALWVPD+FM+RV+ NG+WSL CPNE P L D +G +FE Y YE +G+ ++ +
Sbjct: 231 RDLMNALWVPDIFMKRVEENGIWSLMCPNECPKLNDTYGDDFEYWYKHYEDKGQFREQMP 290
Query: 386 AQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCN 445
A L I++ Q ETGTPYML+KD CN+KSNQ N G IK SNLC E++QY +P ETAVCN
Sbjct: 291 AVTLMRNIIEIQAETGTPYMLYKDACNRKSNQSNCGLIKCSNLCAEIVQYCAPDETAVCN 350
Query: 446 LASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYY 505
LASIA+ +Y+ N FDF+ L V V +LNKIID N+Y
Sbjct: 351 LASIAVNKYI--------------------NNDTFDFQLLHTVVKHVVNSLNKIIDRNFY 390
Query: 506 PVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEI 565
P+ETA++SN+RHRPIGIG+QGLAD F++L +P+ S A LNK I ET+Y+ AL S E+
Sbjct: 391 PIETAKKSNMRHRPIGIGIQGLADAFVMLRIPYVSDAAVLLNKQIAETVYHAALEASYEL 450
Query: 566 AAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTAS 625
A+ PY T+ GS S+GILQ D+W P+ WDW L+ I K G+RNSLLVA MPTA+
Sbjct: 451 ASVSEPYSTFAGSKASEGILQYDLWNTVPTSLWDWSQLKINIQKYGLRNSLLVAYMPTAT 510
Query: 626 TSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSV 685
T+QIL NNE FEP+ SN++ RRVLSGEF VVN++L+ DL ++ L++ ++ I+ + GS+
Sbjct: 511 TAQILNNNESFEPFHSNLFLRRVLSGEFQVVNRYLVDDLIKLNLYTNSMRKTIMANRGSI 570
Query: 686 QKIPQIPEELKAIYKTVWEIKQ---KTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSL 742
I +IP+ LK +Y T+WEI + K +++MA DRG +ID SQS N++M P K+ S+
Sbjct: 571 ASIAKIPDNLKKLYMTIWEIWENNGKYMIEMAADRGAFIDQSQSFNVYMANPTLSKMASV 630
Query: 743 HFHAWLRGLKTGMYYLRSRAAADAIKFTV 771
H + W RGLKTGMYYLR+ AA++ +FTV
Sbjct: 631 HMYGWKRGLKTGMYYLRTLPAANSQQFTV 659
>gi|9634360|ref|NP_037899.1| ORF139 ribonucleotide reductase large subunit (rr1) [Spodoptera
exigua MNPV]
gi|6960598|gb|AAF33668.1| ORF139 ribonucleotide reductase large subunit (rr1) [Spodoptera
exigua MNPV]
Length = 770
Score = 738 bits (1904), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/781 (48%), Positives = 517/781 (66%), Gaps = 51/781 (6%)
Query: 16 DKITARLKKLSYGLSIEHCD-PVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDY 74
+ +T L L + + D P LV + V G +L A+ AA+MT H DY
Sbjct: 23 ENLTLLLNSLCKNIDTRYVDVPKLVHKVVAESGDIGFDKIKL--YCADVAASMTYVHYDY 80
Query: 75 ASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSE 134
A LA RI+V +LH F D+++ +++D+ ++ K+ A L++E
Sbjct: 81 ALLAGRILVEDLHSKVSSCFVTIANDLFSR---------NVLSDEFNQLVKKHGAILNNE 131
Query: 135 IIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMS 194
I ++RD++Y YFGFKTL YLLK+ ++ERPQHMLMRVA+ IH DD+ S I+TY +MS
Sbjct: 132 IKHERDYNYKYFGFKTLTNGYLLKIDDVIMERPQHMLMRVALAIHGDDVKSVIETYQLMS 191
Query: 195 QRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHN 254
FTHASPTLF+AGT R Q+ SCFL +KDDS++GIY TL E A+IS GG+G+S N
Sbjct: 192 LGTFTHASPTLFSAGTRRQQMCSCFLQSIKDDSVDGIYKTLHESALISNLGGGLGLSAQN 251
Query: 255 IRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDL 314
+ GS G+V MLRVFN+ R+VDQGG KRKGA A Y+EPWH +I+EFL+L
Sbjct: 252 --SGGS----------GLVNMLRVFNNMVRHVDQGG-KRKGALAAYIEPWHPEIYEFLNL 298
Query: 315 RKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKY 374
R+N G E+ +ARDL LW+PDLFM+RV++N +WSLF P LAD +G +FE Y Y
Sbjct: 299 RRNMGSEDTKARDLMLGLWIPDLFMKRVKNNQMWSLFSHKTCPDLADKYGFDFEMRYCDY 358
Query: 375 EKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQ 434
E ++ V+A++L+ I+++ +ETG PYML+KD CN SNQ+NLGTIK SNLC E++Q
Sbjct: 359 ENAQVYERQVKARDLFRFIVETNVETGGPYMLYKDHCNNFSNQKNLGTIKCSNLCAEIVQ 418
Query: 435 YTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTE 494
Y ETAVCNLASIA+ + V + FD+ L +T I+
Sbjct: 419 YCDENETAVCNLASIAVNKCV------------------DVDAKTFDYVLLKHLTKIIVR 460
Query: 495 NLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETI 554
NLNKIIDVN+YP + RSN +HRPIG+G+QGLAD F+LL + +DS +A+ +N I ETI
Sbjct: 461 NLNKIIDVNHYPTAESERSNKKHRPIGVGIQGLADAFVLLDIAYDSDDARFVNYSIAETI 520
Query: 555 YYHALRTSSEIAAREGPYETYHGSPVSKGILQ----PDMWGVNPSDR-WDWGGLRDMISK 609
Y+ AL S E+A GPYE+Y SPVS+GIL D GV S+ WDW L+ I+K
Sbjct: 521 YFAALEASCELAKINGPYESYTDSPVSRGILHFHNYDDENGVYHSNNLWDWNELQCNINK 580
Query: 610 NGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGL 669
GVRNSLLVA MPTA+T+QILGNNE FEP+TSN+Y RRVL+GEF VVN++L+ L ++ +
Sbjct: 581 YGVRNSLLVAYMPTATTAQILGNNESFEPFTSNVYLRRVLAGEFQVVNQYLVKALIDLDI 640
Query: 670 WSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNI 729
++P ++NKI+ ++GSVQ I +IP+ +K ++KT WEIK K +++MA DR +ID SQSLN+
Sbjct: 641 YTPELRNKILAENGSVQNIDEIPQHVKNLFKTAWEIKSKCIINMAADRAPFIDQSQSLNL 700
Query: 730 HMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL---KENPKVTDDD 786
+ +P + ++S+HF+AW + LKTGMYYLR++ AA A KFTVD + + K+ DDD
Sbjct: 701 FVAEPTYSVVSSIHFYAWEKKLKTGMYYLRTKPAAQATKFTVDVETVASCSKKRKMNDDD 760
Query: 787 D 787
D
Sbjct: 761 D 761
>gi|155370864|ref|YP_001426398.1| hypothetical protein FR483_N766L [Paramecium bursaria Chlorella
virus FR483]
gi|155124184|gb|ABT16051.1| hypothetical protein FR483_N766L [Paramecium bursaria Chlorella
virus FR483]
Length = 765
Score = 737 bits (1903), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/791 (49%), Positives = 525/791 (66%), Gaps = 54/791 (6%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSY---------------GLSIEHCDPVLVSQKVCT 45
M V+KRDG EAV FDKI R+ +L + GL++ D + +C
Sbjct: 9 MNVIKRDGSTEAVSFDKIMTRISRLCWPENGKPTHKGSRAQNGLAV---DISRIVASICA 65
Query: 46 GVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHY 105
+ +TT QLD+L A+ AA++TT +PDY LAARI +SNL K T S++I D Y
Sbjct: 66 SIVDNITTVQLDDLTADKAASLTTLNPDYGILAARIAISNLQKQT----SDSIVDTYTKL 121
Query: 106 NERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVE 165
L++D+ +++ + I YDRDFD+DYFGF T++R YL KV K++E
Sbjct: 122 EH-------LLSDEFMNLVRTYGDQYQGFIDYDRDFDFDYFGFSTMQRLYLTKVGSKIIE 174
Query: 166 RPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLV-CMK 224
RPQH +RVA+ + DI+ +TY +S+R FTHASPTLFNAG +A L+SCFLV C
Sbjct: 175 RPQHTYLRVAIALWGSDIERVKETYDALSRRKFTHASPTLFNAGFKKANLASCFLVHC-- 232
Query: 225 DDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTAR 284
+DS+ I+ L + A +SK GGIG+ + +IR G+ IRGTNG S+GIVPML+VF+ T+
Sbjct: 233 NDSLSDIFKCLGDVAQLSKYGGGIGLHMSDIRGRGAEIRGTNGESDGIVPMLKVFDTTSA 292
Query: 285 YVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQS 344
Y +QGG +RKG+FAVYLEP H DI +FL LR+N G+E RAR+LFYA+WV DLFM+RV++
Sbjct: 293 YANQGG-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEESLRARNLFYAMWVNDLFMKRVET 351
Query: 345 NGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPY 404
+ WSL P+E PGL+D +G E+E LYTKYE EGKAK+VV+A+++W ++ +QIETG PY
Sbjct: 352 DAQWSLLDPHECPGLSDVYGKEYEELYTKYESEGKAKRVVKARDVWNTMVTTQIETGMPY 411
Query: 405 MLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMES 464
+L KD+ N K+ Q N GTIK SNLC E+++YTS ETAVC + SI L YV
Sbjct: 412 VLNKDSVNAKNMQSNAGTIKGSNLCAEIVEYTSKEETAVCVIGSIVLKNYV--------- 462
Query: 465 HPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGV 524
KN FDFE L + ++T+NL++ IDV Y V A SN R RP+G+GV
Sbjct: 463 -----------KNDAFDFEDLRKHVKVLTKNLDRSIDVMAYAVPEAETSNKRRRPVGVGV 511
Query: 525 QGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGI 584
QGL D F L MPFDS +A++LN++IFE IY+ A+ S E++ GP+ T+ GSP SKGI
Sbjct: 512 QGLQDVFFQLKMPFDSEQARKLNREIFEHIYFAAVEASCELSDEHGPHPTFEGSPASKGI 571
Query: 585 LQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY 644
+Q +WGV P DW GL + K GVRNSL A MPTAST+QI G+ E EP TSNIY
Sbjct: 572 MQYHLWGVTPQTALDWAGLESRV-KKGVRNSLTTALMPTASTAQICGSVEAAEPITSNIY 630
Query: 645 SRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWE 704
SRR L+GEF VVN +L+ +L G WS +KN+II + GS+QK+ I ++KA+YKT WE
Sbjct: 631 SRRTLAGEFPVVNSYLVRELIARGTWSETMKNQIIANGGSIQKVIGIHPDVKAVYKTSWE 690
Query: 705 IKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAA 764
I KT++D+A DRG ++D +QS+N+ + P +TS+ F+AW +GLKT +YY+RS+ AA
Sbjct: 691 ISMKTVIDLAADRGAFVDQTQSMNLFLATPTLKSMTSMLFYAWKKGLKTLVYYVRSKPAA 750
Query: 765 DAIKFTVDTSV 775
+AI TVD +
Sbjct: 751 NAIAVTVDECI 761
>gi|448927093|gb|AGE50668.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus CVA-1]
gi|448928776|gb|AGE52346.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus CVR-1]
Length = 765
Score = 737 bits (1902), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/791 (49%), Positives = 525/791 (66%), Gaps = 54/791 (6%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSY---------------GLSIEHCDPVLVSQKVCT 45
M V+KRDG EAV FDKI R+ +L + GL++ D + +C
Sbjct: 9 MNVIKRDGSTEAVSFDKIMTRISRLCWPENGKPTHKGSRAQNGLAV---DISRIVASICA 65
Query: 46 GVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHY 105
+ +TT QLD+L A+ AA++TT +PDY LAARI +SNL K T S++I D Y
Sbjct: 66 SIVDNITTVQLDDLTADKAASLTTLNPDYGILAARIAISNLQKQT----SDSIVDTYTKL 121
Query: 106 NERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVE 165
L++D+ +++ + I YDRDFD+DYFGF T++R YL KV K++E
Sbjct: 122 EH-------LLSDEFMNLVRTYGDQYQGFIDYDRDFDFDYFGFSTMQRLYLTKVGSKIIE 174
Query: 166 RPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLV-CMK 224
RPQH +RVA+ + DI+ +TY +S+R FTHASPTLFNAG +A L+SCFLV C
Sbjct: 175 RPQHTYLRVAIALWGSDIERVKETYDALSRRKFTHASPTLFNAGFKKANLASCFLVHC-- 232
Query: 225 DDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTAR 284
+DS+ I+ L + A +SK GGIG+ + +IR G+ IRGTNG S+GIVPML+VF+ T+
Sbjct: 233 NDSLSDIFKCLGDVAQLSKYGGGIGLHMSDIRGRGAEIRGTNGESDGIVPMLKVFDTTSA 292
Query: 285 YVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQS 344
Y +QGG +RKG+FAVYLEP H DI +FL LR+N G+E RAR+LFYA+WV DLFM+RV++
Sbjct: 293 YANQGG-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEESLRARNLFYAMWVNDLFMKRVET 351
Query: 345 NGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPY 404
+ WSL P+E PGL+D +G E+E LYTKYE EGKAK+VV+A+++W ++ +QIETG PY
Sbjct: 352 DAQWSLLDPHECPGLSDVYGKEYEELYTKYESEGKAKRVVKARDVWNTMVTTQIETGMPY 411
Query: 405 MLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMES 464
+L KD+ N K+ Q N GTIK SNLC E+++YTS ETAVC + SI L YV
Sbjct: 412 VLNKDSVNAKNMQSNAGTIKGSNLCAEIVEYTSKEETAVCVIGSIVLKNYV--------- 462
Query: 465 HPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGV 524
KN FDFE L + ++T+NL++ IDV Y V A SN R RP+G+GV
Sbjct: 463 -----------KNDAFDFEDLRKHVKVLTKNLDRSIDVMAYAVPEAETSNKRRRPVGVGV 511
Query: 525 QGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGI 584
QGL D F L MPFDS +A++LN++IFE IY+ A+ S E++ GP+ T+ GSP SKGI
Sbjct: 512 QGLQDVFFQLKMPFDSEQARKLNREIFEHIYFAAVEASCELSDEHGPHPTFEGSPASKGI 571
Query: 585 LQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY 644
+Q +WGV P DW GL + K GVRNSL A MPTAST+QI G+ E EP TSNIY
Sbjct: 572 MQYHLWGVTPQTALDWAGLETRV-KKGVRNSLTTALMPTASTAQICGSVEAAEPITSNIY 630
Query: 645 SRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWE 704
SRR L+GEF VVN +L+ +L G WS +KN+II + GS+QK+ I ++KA+YKT WE
Sbjct: 631 SRRTLAGEFPVVNSYLVRELIARGTWSEAMKNQIIANGGSIQKVIGIHPDVKAVYKTSWE 690
Query: 705 IKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAA 764
I KT++D+A DRG ++D +QS+N+ + P +TS+ F+AW +GLKT +YY+RS+ AA
Sbjct: 691 ISMKTVIDLAADRGAFVDQTQSMNLFLATPTLKSMTSMLFYAWKKGLKTLVYYVRSKPAA 750
Query: 765 DAIKFTVDTSV 775
+AI TVD +
Sbjct: 751 NAIAVTVDECI 761
>gi|448928435|gb|AGE52006.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus CVM-1]
Length = 765
Score = 736 bits (1901), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/791 (49%), Positives = 525/791 (66%), Gaps = 54/791 (6%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSY---------------GLSIEHCDPVLVSQKVCT 45
M V+KRDG EAV FDKI R+ +L + GL++ D + +C
Sbjct: 9 MNVIKRDGSAEAVSFDKIMTRISRLCWPENGKPTHKGSRAQNGLAV---DISRIVASICA 65
Query: 46 GVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHY 105
+ +TT QLD+L A+ AA++TT +PDY LAARI +SNL K T S++I D Y
Sbjct: 66 SIVDNITTVQLDDLTADKAASLTTLNPDYGILAARIAISNLQKQT----SDSIVDTYTKL 121
Query: 106 NERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVE 165
L++D+ +++ + I YDRDFD+DYFGF T++R YL KV K++E
Sbjct: 122 EH-------LLSDEFMNLVRTYGDQYQGFIDYDRDFDFDYFGFSTMQRLYLTKVGSKIIE 174
Query: 166 RPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLV-CMK 224
RPQH +RVA+ + DI+ +TY +S+R FTHASPTLFNAG +A L+SCFLV C
Sbjct: 175 RPQHTYLRVAIALWGSDIERVKETYDALSRRKFTHASPTLFNAGFKKANLASCFLVHC-- 232
Query: 225 DDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTAR 284
+DS+ I+ L + A +SK GGIG+ + +IR G+ IRGTNG S+GIVPML+VF+ T+
Sbjct: 233 NDSLSDIFKCLGDVAQLSKYGGGIGLHMSDIRGRGAEIRGTNGESDGIVPMLKVFDTTSA 292
Query: 285 YVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQS 344
Y +QGG +RKG+FAVYLEP H DI +FL LR+N G+E RAR+LFYA+WV DLFM+RV++
Sbjct: 293 YANQGG-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEESLRARNLFYAMWVNDLFMKRVET 351
Query: 345 NGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPY 404
+ WSL P+E PGL+D +G E+E LYTKYE EGKAK+VV+A+++W ++ +QIETG PY
Sbjct: 352 DAQWSLLDPHECPGLSDVYGKEYEELYTKYESEGKAKRVVKARDVWNTMVTTQIETGMPY 411
Query: 405 MLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMES 464
+L KD+ N K+ Q N GTIK SNLC E+++YTS ETAVC + SI L YV
Sbjct: 412 VLNKDSVNAKNMQSNAGTIKGSNLCAEIVEYTSKEETAVCVIGSIVLKNYV--------- 462
Query: 465 HPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGV 524
KN FDFE L + ++T+NL++ IDV Y V A SN R RP+G+GV
Sbjct: 463 -----------KNDAFDFEDLRKHVKVLTKNLDRSIDVMAYAVPEAETSNKRRRPVGVGV 511
Query: 525 QGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGI 584
QGL D F L MPFDS +A++LN++IFE IY+ A+ S E++ GP+ T+ GSP SKGI
Sbjct: 512 QGLQDVFFQLKMPFDSEQARKLNREIFEHIYFAAVEASCELSDEHGPHPTFEGSPASKGI 571
Query: 585 LQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY 644
+Q +WGV P DW GL + K GVRNSL A MPTAST+QI G+ E EP TSNIY
Sbjct: 572 MQYHLWGVTPQTALDWAGLESRV-KKGVRNSLTTALMPTASTAQICGSVEAAEPITSNIY 630
Query: 645 SRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWE 704
SRR L+GEF VVN +L+ +L G WS +KN+II + GS+QK+ I ++KA+YKT WE
Sbjct: 631 SRRTLAGEFPVVNSYLVRELIARGTWSEAMKNQIIANGGSIQKVIGIHPDVKAVYKTSWE 690
Query: 705 IKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAA 764
I KT++D+A DRG ++D +QS+N+ + P +TS+ F+AW +GLKT +YY+RS+ AA
Sbjct: 691 ISMKTVIDLAADRGAFVDQTQSMNLFLATPTLKSMTSMLFYAWKKGLKTLVYYVRSKPAA 750
Query: 765 DAIKFTVDTSV 775
+AI TVD +
Sbjct: 751 NAIAVTVDECI 761
>gi|448927759|gb|AGE51332.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus CVG-1]
Length = 765
Score = 736 bits (1899), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/791 (49%), Positives = 525/791 (66%), Gaps = 54/791 (6%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSY---------------GLSIEHCDPVLVSQKVCT 45
M V+KRDG EAV FDKI R+ +L + GL++ D + +C
Sbjct: 9 MNVIKRDGSAEAVSFDKIMTRISRLCWPENGKPTHKGSRAQNGLAV---DISRIVASICA 65
Query: 46 GVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHY 105
+ +TT QLD+L A+ AA++TT +PDY LAARI +SNL K T S++I D Y
Sbjct: 66 SIVDNITTVQLDDLTADKAASLTTLNPDYGILAARIAISNLQKQT----SDSIVDTYTKL 121
Query: 106 NERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVE 165
L++D+ +++ + I YDRDFD+DYFGF T++R YL KV K++E
Sbjct: 122 EH-------LLSDEFMNLVRTYGDQYQGFIDYDRDFDFDYFGFSTMQRLYLTKVGSKIIE 174
Query: 166 RPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLV-CMK 224
RPQH +RVA+ + DI+ +TY +S+R FTHASPTLFNAG +A L+SCFLV C
Sbjct: 175 RPQHTYLRVAIALWGSDIERVKETYDALSRRKFTHASPTLFNAGFKKANLASCFLVHC-- 232
Query: 225 DDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTAR 284
+DS+ I+ L + A +SK GGIG+ + +IR G+ IRGTNG S+GIVPML+VF+ T+
Sbjct: 233 NDSLSDIFKCLGDVAQLSKYGGGIGLHMSDIRGRGAEIRGTNGESDGIVPMLKVFDTTSA 292
Query: 285 YVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQS 344
Y +QGG +RKG+FAVYLEP H DI +FL LR+N G+E RAR+LFYA+WV DLFM+RV++
Sbjct: 293 YANQGG-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEESLRARNLFYAMWVNDLFMKRVET 351
Query: 345 NGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPY 404
+ WSL P+E PGL+D +G E+E LYTKYE EGKAK+VV+A+++W ++ +QIETG PY
Sbjct: 352 DAQWSLLDPHECPGLSDVYGKEYEELYTKYESEGKAKRVVKARDVWNTMVTTQIETGMPY 411
Query: 405 MLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMES 464
+L KD+ N K+ Q N GTIK SNLC E+++YTS ETAVC + SI L YV
Sbjct: 412 VLNKDSVNAKNMQSNAGTIKGSNLCAEIVEYTSKEETAVCVIGSIVLKNYV--------- 462
Query: 465 HPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGV 524
KN FDFE L + ++T+NL++ IDV Y V A SN R RP+G+GV
Sbjct: 463 -----------KNDAFDFEDLRKHVKVLTKNLDRSIDVMAYAVPEAETSNKRRRPVGVGV 511
Query: 525 QGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGI 584
QGL D F L MPFDS +A++LN++IFE IY+ A+ S E++ GP+ T+ GSP SKGI
Sbjct: 512 QGLQDVFFKLKMPFDSEQARKLNREIFEHIYFAAVEASCELSDEHGPHPTFEGSPASKGI 571
Query: 585 LQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY 644
+Q +WGV P DW GL + K GVRNSL A MPTAST+QI G+ E EP TSNIY
Sbjct: 572 MQYHLWGVTPQTALDWAGLETRV-KKGVRNSLTTALMPTASTAQICGSVEAAEPITSNIY 630
Query: 645 SRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWE 704
SRR L+GEF VVN +L+ +L G WS +KN+II + GS+QK+ I ++KA+YKT WE
Sbjct: 631 SRRTLAGEFPVVNSYLVRELIARGTWSEAMKNQIIANGGSIQKVIGIHPDVKAVYKTSWE 690
Query: 705 IKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAA 764
I KT++D+A DRG ++D +QS+N+ + P +TS+ F+AW +GLKT +YY+RS+ AA
Sbjct: 691 ISMKTVIDLAADRGAFVDQTQSMNLFLATPTLKSMTSMLFYAWKKGLKTLVYYVRSKPAA 750
Query: 765 DAIKFTVDTSV 775
+AI TVD +
Sbjct: 751 NAIAVTVDECI 761
>gi|448929790|gb|AGE53357.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus Fr5L]
Length = 765
Score = 734 bits (1896), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 389/791 (49%), Positives = 523/791 (66%), Gaps = 54/791 (6%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSY---------------GLSIEHCDPVLVSQKVCT 45
M V+KRDG EAV FDKI R+ +L + GL++ D + +C
Sbjct: 9 MNVIKRDGSAEAVSFDKIMTRISRLCWPENGKPTHKGSRAQNGLAV---DISRIVASICA 65
Query: 46 GVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHY 105
+ +TT QLD+L A+ AA++TT +PDY LAARI +SNL K T S++I D Y
Sbjct: 66 SIVDNITTVQLDDLTADKAASLTTLNPDYGILAARIAISNLQKQT----SDSIVDTYTKL 121
Query: 106 NERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVE 165
L++D+ +++ + I YDRDFD+DYFGF T++R YL KV K++E
Sbjct: 122 EH-------LLSDEFMNLVHTYGDQYQGFIDYDRDFDFDYFGFSTMQRLYLTKVDSKIIE 174
Query: 166 RPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLV-CMK 224
RPQH +RVA+ + DI+ +TY +S+R FTHASPTLFNAG +A L+SCFLV C
Sbjct: 175 RPQHTYLRVAIALWGSDIERVKETYDALSRRKFTHASPTLFNAGFKKANLASCFLVHC-- 232
Query: 225 DDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTAR 284
+DS+ I+ L + A +SK GGIG+ + +IR G+ IRGTNG S+GIVPML+VF+ T+
Sbjct: 233 NDSLTDIFKCLGDVAQLSKYGGGIGLHMSDIRGRGAEIRGTNGESDGIVPMLKVFDTTSA 292
Query: 285 YVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQS 344
Y +QGG +RKG+FAVYLEP H DI +FL LR+N G+E RAR+LFYA+WV DLFM+RV++
Sbjct: 293 YANQGG-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEESLRARNLFYAMWVNDLFMKRVET 351
Query: 345 NGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPY 404
+ WSL P+E PGL+D +G E+E LYTKYE EGKAK+VV+A+++W ++ +QIETG PY
Sbjct: 352 DAQWSLLDPHECPGLSDVYGKEYEELYTKYESEGKAKRVVKARDVWNTMVTTQIETGMPY 411
Query: 405 MLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMES 464
+L KD+ N K+ Q N GTIK SNLC E+++YTS ETAVC + SI L YV
Sbjct: 412 VLNKDSVNAKNMQSNAGTIKGSNLCAEIVEYTSKEETAVCVIGSIVLKNYV--------- 462
Query: 465 HPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGV 524
KN FDFE L + ++T+NL++ IDV Y V A SN R RP+G+GV
Sbjct: 463 -----------KNDAFDFEDLRKHVKVLTKNLDRSIDVMAYAVPEAETSNKRRRPVGVGV 511
Query: 525 QGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGI 584
QGL D F L MPFDS +A++LN++IFE IY+ A+ S E++ GP+ T+ GSP SKGI
Sbjct: 512 QGLQDVFFKLKMPFDSEQARKLNREIFEHIYFAAVEASCELSDEHGPHPTFEGSPASKGI 571
Query: 585 LQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY 644
+Q +WGV P DW GL + K GVRNSL A MPTAST+QI G+ E EP TSNIY
Sbjct: 572 MQYHLWGVTPQTALDWAGLESRV-KKGVRNSLTTALMPTASTAQICGSVEAAEPITSNIY 630
Query: 645 SRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWE 704
SRR L+GEF VVN +L+ +L G WS +KN+II + GSVQK+ I ++KA+YKT WE
Sbjct: 631 SRRTLAGEFPVVNSYLVRELIARGTWSEAMKNQIIANGGSVQKVIGIHPDVKAVYKTSWE 690
Query: 705 IKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAA 764
I KT++D+A DRG ++D +QS N+ + P +TS+ F+AW +GLKT +YY RS+ AA
Sbjct: 691 ISMKTVIDLAADRGAFVDQTQSQNLFLATPTLKSMTSMLFYAWKKGLKTLVYYTRSKPAA 750
Query: 765 DAIKFTVDTSV 775
+AI TVD +
Sbjct: 751 NAIAVTVDECI 761
>gi|155122463|gb|ABT14331.1| hypothetical protein MT325_M777L [Paramecium bursaria chlorella
virus MT325]
Length = 765
Score = 734 bits (1896), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/791 (48%), Positives = 527/791 (66%), Gaps = 54/791 (6%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSY---------------GLSIEHCDPVLVSQKVCT 45
M V+KR+G EAV FDKI R+ +L + GL++ D + +C
Sbjct: 9 MNVIKRNGSSEAVSFDKIMTRISRLCWPENGKPTHRGSRAQNGLAV---DISRIVANICA 65
Query: 46 GVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHY 105
+ +TT QLD+L A+ AA++TT +PDY LAARI +SNL K T S++I D Y+
Sbjct: 66 SIVDNITTVQLDDLTADKAASLTTLNPDYGILAARIAISNLQKQT----SDSIVDTYSKL 121
Query: 106 NERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVE 165
L++D+ +++ + + + I YDRDFD+DYFGF T++R YL KV K++E
Sbjct: 122 EH-------LLSDEFMNLVRTHGDQYQAFIDYDRDFDFDYFGFATMQRLYLTKVGSKIIE 174
Query: 166 RPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLV-CMK 224
RPQH +RVA+ + DI+ +TY +S+R FTHASPTLFNAG +A L+SCFLV C
Sbjct: 175 RPQHTYLRVAIALWGSDIERVKETYDALSRRKFTHASPTLFNAGFKKANLASCFLVHC-- 232
Query: 225 DDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTAR 284
+DS+ I+ L + A +SK GGIG+ + +IR G+ IRGTNG S+GIVPML+VF+ T+
Sbjct: 233 NDSLTDIFKCLGDVAQLSKYGGGIGLHMSDIRGRGAEIRGTNGESDGIVPMLKVFDTTSA 292
Query: 285 YVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQS 344
Y +QGG +RKG+FAVYLEP H DI +FL LR+N G+E RAR+LFYA+WV DLFM+RV++
Sbjct: 293 YANQGG-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEESLRARNLFYAMWVNDLFMKRVET 351
Query: 345 NGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPY 404
+ WSL P+E PGL+D +G E+E LYTKYE EGKAK+VV+A+++W ++ +Q+ETG PY
Sbjct: 352 DAQWSLLDPHECPGLSDVYGKEYEELYTKYESEGKAKRVVKARDVWNTMVTTQMETGMPY 411
Query: 405 MLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMES 464
+L KD+ N K+ Q N GTIK SNLC E+++YTS ETAVC + SI L YV
Sbjct: 412 VLNKDSVNAKNMQSNAGTIKGSNLCAEIVEYTSKEETAVCVIGSIVLKNYV--------- 462
Query: 465 HPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGV 524
KN FDFE L + ++T+NL++ IDV Y V A SN R RP+G+GV
Sbjct: 463 -----------KNDAFDFEDLRKHVKVLTKNLDRSIDVMAYAVPEAETSNKRRRPVGVGV 511
Query: 525 QGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGI 584
QGL D F L MPFDS +A++LN++IFE IY+ A+ S E++ GP+ T+ GSP SKGI
Sbjct: 512 QGLQDVFFQLKMPFDSEQARKLNREIFEHIYFAAVEASCELSDEHGPHPTFEGSPASKGI 571
Query: 585 LQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY 644
+Q +WGV P DW GL + K GVRNSL A MPTAST+QI G+ E EP TSNIY
Sbjct: 572 MQYHLWGVTPQTALDWAGLESRV-KKGVRNSLTTALMPTASTAQICGSVEAAEPITSNIY 630
Query: 645 SRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWE 704
SRR L+GEF VVN +L+ +L G WS +KN+II + GS+QK+ I ++KA+YKT WE
Sbjct: 631 SRRTLAGEFPVVNSYLVRELIARGTWSEAMKNQIIANGGSIQKVIGIHPDVKAVYKTSWE 690
Query: 705 IKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAA 764
I KT++D+A DRG ++D +QS+N+ + P +TS+ F+AW +GLKT +YY RS+ AA
Sbjct: 691 ISMKTVIDLAADRGAFVDQTQSMNLFLATPTLKSMTSMLFYAWKKGLKTLVYYTRSKPAA 750
Query: 765 DAIKFTVDTSV 775
+AI TVD +
Sbjct: 751 NAIAVTVDECI 761
>gi|448934617|gb|AGE58170.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus NW665.2]
Length = 765
Score = 734 bits (1895), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 388/791 (49%), Positives = 523/791 (66%), Gaps = 54/791 (6%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSY---------------GLSIEHCDPVLVSQKVCT 45
M V+KRDG EAV FDKI R+ +L + GL++ D + +C
Sbjct: 9 MNVIKRDGSAEAVSFDKIMTRISRLCWPENGKPTHKGSRAQNGLAV---DISRIVASICA 65
Query: 46 GVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHY 105
+ +TT QLD+L A+ AA++TT +PDY LAARI +SNL K T S++I D Y
Sbjct: 66 SIVDNITTVQLDDLTADKAASLTTLNPDYGILAARIAISNLQKQT----SDSIVDTYTKL 121
Query: 106 NERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVE 165
L++D+ +++ + I YDRDFD+DYFGF T++R YL KV K++E
Sbjct: 122 EH-------LLSDEFMNLVHTYGDQYQGFIDYDRDFDFDYFGFSTMQRLYLTKVGSKIIE 174
Query: 166 RPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLV-CMK 224
RPQH +RVA+ + DI+ +TY +S+R FTHASPTLFNAG +A L+SCFLV C
Sbjct: 175 RPQHTYLRVAIALWGSDIERVKETYDALSRRKFTHASPTLFNAGFKKANLASCFLVHC-- 232
Query: 225 DDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTAR 284
+DS+ I+ L + A +SK GGIG+ + +IR G+ IRGTNG S+GIVPML+VF+ T+
Sbjct: 233 NDSLSDIFKCLGDVAQLSKYGGGIGLHMSDIRGRGAEIRGTNGESDGIVPMLKVFDTTSA 292
Query: 285 YVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQS 344
Y +QGG +RKG+FAVYLEP H DI +FL LR+N G+E RAR+LFYA+WV DLFM+RV++
Sbjct: 293 YANQGG-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEESLRARNLFYAMWVNDLFMKRVET 351
Query: 345 NGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPY 404
+ WSL P+E PGL+D +G E+E LYTKYE EGKAK+VV+A+++W ++ +QIETG PY
Sbjct: 352 DAQWSLLDPHECPGLSDVYGKEYEELYTKYESEGKAKRVVKARDVWNTMVTTQIETGMPY 411
Query: 405 MLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMES 464
+L KD+ N K+ Q N GTIK SNLC E+++YTS ETAVC + SI L YV
Sbjct: 412 VLNKDSVNAKNMQSNAGTIKGSNLCAEIVEYTSKEETAVCVIGSIVLKNYV--------- 462
Query: 465 HPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGV 524
KN FDFE L + ++T+NL++ IDV Y V A SN R RP+G+GV
Sbjct: 463 -----------KNDAFDFEDLRKHVKVLTKNLDRSIDVMAYAVPEAETSNKRRRPVGVGV 511
Query: 525 QGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGI 584
QGL D F L MPFDS +A++LN++IFE IY+ A+ S E++ GP+ T+ GSP SKGI
Sbjct: 512 QGLQDVFFKLKMPFDSEQARKLNREIFEHIYFAAVEASCELSDEHGPHPTFEGSPASKGI 571
Query: 585 LQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY 644
+Q +WGV P DW GL + K GVRNSL A MPTAST+QI G+ E EP TSNIY
Sbjct: 572 MQYHLWGVTPQTALDWAGLESRV-KKGVRNSLTTALMPTASTAQICGSVEAAEPITSNIY 630
Query: 645 SRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWE 704
SRR L+GEF VVN +L+ +L G WS +KN+II + GS+QK+ I ++KA+YKT WE
Sbjct: 631 SRRTLAGEFPVVNSYLVRELIARGTWSETMKNQIIANGGSIQKVIGIHPDVKAVYKTSWE 690
Query: 705 IKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAA 764
I KT++D+A DRG ++D +QS N+ + P +TS+ F+AW +GLKT +YY RS+ AA
Sbjct: 691 ISMKTVIDLAADRGAFVDQTQSQNLFLATPTLKSMTSMLFYAWKKGLKTLVYYTRSKPAA 750
Query: 765 DAIKFTVDTSV 775
+AI TVD +
Sbjct: 751 NAIAVTVDECI 761
>gi|448935705|gb|AGE59255.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus OR0704.2.2]
Length = 765
Score = 734 bits (1894), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/791 (48%), Positives = 524/791 (66%), Gaps = 54/791 (6%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSY---------------GLSIEHCDPVLVSQKVCT 45
M V+KRDG E V FDKI R+ +L + GL++ D + +C
Sbjct: 9 MNVIKRDGSAEPVSFDKIMTRISRLCWPENGKPTHKGSRAQNGLAV---DISRIVASICA 65
Query: 46 GVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHY 105
+ +TT QLD+L A+ AA++TT +PDY LAARI +SNL K T S++I D Y+
Sbjct: 66 SIVDNITTVQLDDLTADKAASLTTLNPDYGILAARIAISNLQKQT----SDSIVDTYSKL 121
Query: 106 NERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVE 165
L++D+ +++ + + I YDRDFD+DYFGF T++R YL KV K++E
Sbjct: 122 EH-------LLSDEFMNLVRTYGDKYQAFIDYDRDFDFDYFGFSTMQRLYLTKVDSKIIE 174
Query: 166 RPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLV-CMK 224
RPQH +RVA+ + DI+ +TY +S+R FTHASPTLFNAG +A L+SCFLV C
Sbjct: 175 RPQHTYLRVAIALWGSDIERVKETYDALSRRKFTHASPTLFNAGFKKANLASCFLVHC-- 232
Query: 225 DDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTAR 284
+DS+ I+ L + A +SK GGIG+ + +IR G+ IRGTNG S+GIVPML+VF+ T+
Sbjct: 233 NDSLTDIFKCLGDVAQLSKYGGGIGLHMSDIRGRGAEIRGTNGESDGIVPMLKVFDTTSA 292
Query: 285 YVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQS 344
Y +QGG +RKG+FAVYLEP H DI +FL LR+N G+E RAR+LFYA+WV DLFM+RV++
Sbjct: 293 YANQGG-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEESLRARNLFYAMWVNDLFMKRVET 351
Query: 345 NGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPY 404
+ WSL P+E PGL+D +G E+E LYTKYE EGKAK+VV+A+++W ++ +QIETG PY
Sbjct: 352 DAQWSLLDPHECPGLSDVYGKEYEELYTKYESEGKAKRVVKARDVWNTMVTTQIETGMPY 411
Query: 405 MLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMES 464
+L KD+ N K+ Q N GTIK SNLC E+++YTS ETAVC + SI L YV
Sbjct: 412 VLNKDSVNAKNMQSNAGTIKGSNLCAEIVEYTSKEETAVCVIGSIVLKNYV--------- 462
Query: 465 HPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGV 524
KN FDFE L + ++T+NL++ IDV Y V A SN R RP+G+GV
Sbjct: 463 -----------KNDAFDFEDLRKHVKVLTKNLDRSIDVMAYAVPEAETSNKRRRPVGVGV 511
Query: 525 QGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGI 584
QGL D F L MPFDS +A++LN++IFE IY+ A+ S E++ GP+ T+ GSP SKG+
Sbjct: 512 QGLQDVFFQLKMPFDSEQARKLNREIFEHIYFAAVEASCELSDEHGPHPTFEGSPASKGV 571
Query: 585 LQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY 644
+Q +WGV P DW GL + K GVRNSL A MPTAST+QI G+ E EP TSNIY
Sbjct: 572 MQYHLWGVTPQTALDWAGLESRV-KKGVRNSLTTALMPTASTAQICGSVEAAEPITSNIY 630
Query: 645 SRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWE 704
SRR L+GEF VVN +L+ +L G WS +KN+II + GSVQK+ I ++KA+YKT WE
Sbjct: 631 SRRTLAGEFPVVNSYLVRELIARGTWSEAMKNQIIANGGSVQKVIGIHPDVKAVYKTSWE 690
Query: 705 IKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAA 764
I KT++D+A DRG ++D +QS N+ + P +TS+ F+AW +GLKT +YY RS+ AA
Sbjct: 691 ISMKTVIDLAADRGAFVDQTQSQNLFLATPTLKSMTSMLFYAWKKGLKTLVYYTRSKPAA 750
Query: 765 DAIKFTVDTSV 775
+AI TVD +
Sbjct: 751 NAIAVTVDECI 761
>gi|448925405|gb|AGE48985.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus AP110A]
Length = 765
Score = 734 bits (1894), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/791 (48%), Positives = 523/791 (66%), Gaps = 54/791 (6%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSY---------------GLSIEHCDPVLVSQKVCT 45
M V+KRDG EAV FDKI R+ +L + GL++ D + +C
Sbjct: 9 MNVIKRDGSAEAVSFDKIMTRISRLCWPENGKPTHKGSRAQNGLAV---DISRIVASICA 65
Query: 46 GVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHY 105
+ +TT QLD+L A+ AA++TT +PDY LAARI +SNL K T S++I D Y
Sbjct: 66 SIVDNITTVQLDDLTADKAASLTTLNPDYGILAARIAISNLQKQT----SDSIVDTYTKL 121
Query: 106 NERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVE 165
L++D+ + + + I YDRDFD+DYFGF T++R YL KV K++E
Sbjct: 122 EH-------LLSDEFMNFVRTYGDQYQGFIDYDRDFDFDYFGFSTMQRLYLTKVGSKIIE 174
Query: 166 RPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLV-CMK 224
RPQH +RVA+ + DI+ +TY +S+R FTHASPTLFNAG +A L+SCFLV C
Sbjct: 175 RPQHTYLRVAIALWGSDIERVKETYDALSRRKFTHASPTLFNAGFKKANLASCFLVHC-- 232
Query: 225 DDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTAR 284
+DS+ I+ L + A +SK GGIG+ + +IR G+ IRGTNG S+GIVPML+VF+ T+
Sbjct: 233 NDSLSDIFKCLGDVAQLSKYGGGIGLHMSDIRGRGAEIRGTNGESDGIVPMLKVFDTTSA 292
Query: 285 YVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQS 344
Y +QGG +RKG+FAVYLEP H DI +FL LR+N G+E RAR+LFYA+WV DLFM+RV++
Sbjct: 293 YANQGG-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEESLRARNLFYAMWVNDLFMKRVET 351
Query: 345 NGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPY 404
+ WSL P+E PGL+D +G E+E LYTKYE EGKAK+VV+A+++W ++ +QIETG PY
Sbjct: 352 DAQWSLLDPHECPGLSDVYGKEYEELYTKYESEGKAKRVVKARDVWNTMVTTQIETGMPY 411
Query: 405 MLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMES 464
+L KD+ N K+ Q N GTIK SNLC E+++YTS ETAVC + SI L YV
Sbjct: 412 VLNKDSVNAKNMQSNAGTIKGSNLCAEIVEYTSKEETAVCVIGSIVLKNYV--------- 462
Query: 465 HPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGV 524
KN FDFE L + ++T+NL++ IDV Y V A SN R RP+G+GV
Sbjct: 463 -----------KNDAFDFEDLRKHVKVLTKNLDRSIDVMAYAVPEAETSNKRRRPVGVGV 511
Query: 525 QGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGI 584
QGL D F L MPFDS +A++LN++IFE IY+ A+ S E++ GP+ T+ GSP SKGI
Sbjct: 512 QGLQDVFFQLKMPFDSEQARKLNREIFEHIYFAAVEASCELSDEHGPHPTFEGSPASKGI 571
Query: 585 LQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY 644
+Q +W V P DW GL + K GVRNSL A MPTAST+QI G+ E EP TSNIY
Sbjct: 572 MQYHLWSVTPQTALDWAGLESRV-KKGVRNSLTTALMPTASTAQICGSVEAAEPITSNIY 630
Query: 645 SRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWE 704
SRR L+GEF VVN +L+ +L G WS +KN+II + GS+QK+ I ++KA+YKT WE
Sbjct: 631 SRRTLAGEFPVVNSYLVRELIARGTWSETMKNQIIANGGSIQKVIGIHPDVKAVYKTSWE 690
Query: 705 IKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAA 764
I KT++D+A DRG ++D +QS+N+ + P +TS+ F+AW +GLKT +YY+RS+ AA
Sbjct: 691 ISMKTVIDLAADRGAFVDQTQSMNLFLATPTLKSMTSMLFYAWKKGLKTLVYYVRSKPAA 750
Query: 765 DAIKFTVDTSV 775
+AI TVD +
Sbjct: 751 NAIAVTVDECI 761
>gi|448926428|gb|AGE50005.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus Can18-4]
Length = 765
Score = 734 bits (1894), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/791 (48%), Positives = 526/791 (66%), Gaps = 54/791 (6%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSY---------------GLSIEHCDPVLVSQKVCT 45
M V+KR+G EAV FDKI R+ +L + GL++ D + +C
Sbjct: 9 MNVIKRNGSSEAVSFDKIMTRISRLCWPENGKPTHRGSRAQNGLAV---DISRIVANICA 65
Query: 46 GVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHY 105
+ +TT QLD+L A+ AA++TT +PDY LAARI +SNL K T S++I D Y+
Sbjct: 66 SIVDNITTVQLDDLTADKAASLTTLNPDYGILAARIAISNLQKQT----SDSIVDTYSKL 121
Query: 106 NERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVE 165
L++D+ +++ + + I YDRDFD+DYFGF T++R YL KV K++E
Sbjct: 122 EH-------LLSDEFMNLVRTYGDQYQAFIDYDRDFDFDYFGFATMQRLYLTKVGSKIIE 174
Query: 166 RPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLV-CMK 224
RPQH +RVA+ + DI+ +TY +S+R FTHASPTLFNAG +A L+SCFLV C
Sbjct: 175 RPQHTYLRVAIALWGSDIERVKETYDALSRRKFTHASPTLFNAGFKKANLASCFLVHC-- 232
Query: 225 DDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTAR 284
+DS+ I+ L + A +SK GGIG+ + +IR G+ IRGTNG S+GIVPML+VF+ T+
Sbjct: 233 NDSLTDIFKCLGDVAQLSKYGGGIGLHMSDIRGRGAEIRGTNGESDGIVPMLKVFDTTSA 292
Query: 285 YVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQS 344
Y +QGG +RKG+FAVYLEP H DI +FL LR+N G+E RAR+LFYA+WV DLFM+RV++
Sbjct: 293 YANQGG-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEESLRARNLFYAMWVNDLFMKRVET 351
Query: 345 NGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPY 404
+ WSL P+E PGL+D +G E+E LYTKYE EGKAK+VV+A+++W ++ +Q+ETG PY
Sbjct: 352 DAQWSLLDPHECPGLSDVYGKEYEELYTKYETEGKAKRVVKARDVWNTMVTTQMETGMPY 411
Query: 405 MLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMES 464
+L KD+ N K+ Q N GTIK SNLC E+++YTS ETAVC + SI L YV
Sbjct: 412 VLNKDSVNAKNMQSNAGTIKGSNLCAEIVEYTSKEETAVCVIGSIVLKNYV--------- 462
Query: 465 HPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGV 524
KN FDFE L + ++T+NL++ IDV Y V A SN R RP+G+GV
Sbjct: 463 -----------KNDAFDFEDLRKHVKVLTKNLDRSIDVMAYAVPEAETSNKRRRPVGVGV 511
Query: 525 QGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGI 584
QGL D F L MPFDS +A++LN++IFE IY+ A+ S E++ GP+ T+ GSP SKGI
Sbjct: 512 QGLQDVFFQLKMPFDSEQARKLNREIFEHIYFAAVEASCELSDEHGPHPTFEGSPASKGI 571
Query: 585 LQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY 644
+Q +WGV P DW GL + K GVRNSL A MPTAST+QI G+ E EP TSNIY
Sbjct: 572 MQYHLWGVTPQTALDWAGLESRV-KKGVRNSLTTALMPTASTAQICGSVEAAEPITSNIY 630
Query: 645 SRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWE 704
SRR L+GEF VVN +L+ +L G WS +KN+II + GS+QK+ I ++KA+YKT WE
Sbjct: 631 SRRTLAGEFPVVNSYLVRELIARGTWSEAMKNQIIANGGSIQKVIGIHPDVKAVYKTSWE 690
Query: 705 IKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAA 764
I KT++D+A DRG ++D +QS+N+ + P +TS+ F+AW +GLKT +YY RS+ AA
Sbjct: 691 ISMKTVIDLAADRGAFVDQTQSMNLFLATPTLKSMTSMLFYAWKKGLKTLVYYTRSKPAA 750
Query: 765 DAIKFTVDTSV 775
+AI TVD +
Sbjct: 751 NAIAVTVDECI 761
>gi|448927432|gb|AGE51006.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus CVB-1]
Length = 765
Score = 733 bits (1893), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 387/791 (48%), Positives = 524/791 (66%), Gaps = 54/791 (6%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSY---------------GLSIEHCDPVLVSQKVCT 45
M V+KRDG EAV FDKI R+ +L + GL++ D + +C
Sbjct: 9 MNVIKRDGSTEAVSFDKIMTRISRLCWPENGKPTHKGSRAQNGLAV---DISRIVASICA 65
Query: 46 GVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHY 105
+ +TT QLD+L A+ AA++TT +PDY LAARI +SNL K T S++I D Y
Sbjct: 66 SIVDNITTVQLDDLTADKAASLTTLNPDYGILAARIAISNLQKQT----SDSIVDTYAKL 121
Query: 106 NERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVE 165
L++D+ +++ + I YDRDFD+DYFGF T++R YL KV K++E
Sbjct: 122 EH-------LLSDEFMNLVRTYGDQYQGFIDYDRDFDFDYFGFSTMQRLYLTKVGSKIIE 174
Query: 166 RPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLV-CMK 224
RPQH +RVA+ + DI+ +TY +S+R FTHASPTLFNAG +A L+SCFLV C
Sbjct: 175 RPQHTYLRVAIALWGSDIERVKETYDALSRRKFTHASPTLFNAGFKKANLASCFLVHC-- 232
Query: 225 DDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTAR 284
+DS+ I+ L + A +SK GGIG+ + +IR G+ IRGTNG S+GIVPML+VF+ T+
Sbjct: 233 NDSLSDIFKCLGDVAQLSKYGGGIGLHMSDIRGRGAEIRGTNGESDGIVPMLKVFDTTSA 292
Query: 285 YVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQS 344
Y +QGG +RKG+FAVYLEP H DI +FL LR+N G+E RAR+LFYA+WV DLFM+RV++
Sbjct: 293 YANQGG-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEESLRARNLFYAMWVNDLFMKRVET 351
Query: 345 NGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPY 404
+ WSL P+E PGL+D +G E+E LYTKYE EGKAK+VV+A+++W ++ +QIETG PY
Sbjct: 352 DAQWSLLDPHECPGLSDVYGKEYEELYTKYESEGKAKRVVKARDVWNTMVTTQIETGMPY 411
Query: 405 MLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMES 464
+L KD+ N K+ Q N GTIK SNLC E+++YTS ETAVC + SI L YV
Sbjct: 412 VLNKDSVNAKNMQSNAGTIKGSNLCAEIVEYTSKEETAVCVIGSIVLKNYV--------- 462
Query: 465 HPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGV 524
KN FDFE L + ++T+NL++ IDV Y V A SN R RP+G+GV
Sbjct: 463 -----------KNDAFDFEDLRKHVKVLTKNLDRSIDVMAYAVPEAETSNKRRRPVGVGV 511
Query: 525 QGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGI 584
QGL D F L MPFDS +A++LN++IFE IY+ A+ S E++ GP+ T+ GSP SKGI
Sbjct: 512 QGLQDVFFQLKMPFDSEQARKLNREIFEHIYFAAVEASCELSDEHGPHPTFEGSPASKGI 571
Query: 585 LQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY 644
+Q +WGV P DW GL + K GVRNSL A MPTAST+QI G+ E EP TSNIY
Sbjct: 572 MQYHLWGVTPQTALDWAGLESRVQK-GVRNSLTTALMPTASTAQICGSVEAAEPITSNIY 630
Query: 645 SRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWE 704
SRR L+GEF VVN +L+ +L WS +KN+II + GS+QK+ I ++KA+YKT WE
Sbjct: 631 SRRTLAGEFPVVNSYLVRELIARETWSEAMKNQIIANGGSIQKVIGIHPDVKAVYKTSWE 690
Query: 705 IKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAA 764
I KT++D+A DRG ++D +QS+N+ + P +TS+ F+AW +GLKT +YY+RS+ AA
Sbjct: 691 ISMKTVIDLAADRGAFVDQTQSMNLFLATPTLKSMTSMLFYAWKKGLKTLVYYVRSKPAA 750
Query: 765 DAIKFTVDTSV 775
+AI TVD +
Sbjct: 751 NAIAVTVDECI 761
>gi|448929444|gb|AGE53012.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus CZ-2]
Length = 765
Score = 732 bits (1889), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 386/791 (48%), Positives = 524/791 (66%), Gaps = 54/791 (6%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSY---------------GLSIEHCDPVLVSQKVCT 45
M V+KR+G E V FDKI R+ +L + GL++ D + +C
Sbjct: 9 MNVIKRNGSAEPVSFDKIMTRISRLCWPENGKPTHKGSRAQNGLAV---DISRIVASICA 65
Query: 46 GVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHY 105
+ +TT QLD+L A+ AA++TT +PDY LAARI +SNL K T S++I D Y+
Sbjct: 66 SIVDNITTVQLDDLTADKAASLTTLNPDYGILAARIAISNLQKQT----SDSIVDTYSKL 121
Query: 106 NERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVE 165
L++D+ +++ + + I YDRDFD+DYFGF T++R YL KV K++E
Sbjct: 122 EH-------LLSDEFMNLVRTYGDKYQAFIDYDRDFDFDYFGFSTMQRLYLTKVDSKIIE 174
Query: 166 RPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLV-CMK 224
RPQH +RVA+ + DI+ +TY +S+R FTHASPTLFNAG +A L+SCFLV C
Sbjct: 175 RPQHTYLRVAIALWGSDIERVKETYDALSRRKFTHASPTLFNAGFKKANLASCFLVHC-- 232
Query: 225 DDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTAR 284
+DS+ I+ L + A +SK GGIG+ + +IR G+ IRGTNG S+GIVPML+VF+ T+
Sbjct: 233 NDSLTDIFKCLGDVAQLSKYGGGIGLHMSDIRGRGAEIRGTNGESDGIVPMLKVFDTTSA 292
Query: 285 YVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQS 344
Y +QGG +RKG+FAVYLEP H DI +FL LR+N G+E RAR+LFYA+WV DLFM+RV++
Sbjct: 293 YANQGG-RRKGSFAVYLEPHHPDIMDFLLLRRNQGEESLRARNLFYAMWVNDLFMKRVET 351
Query: 345 NGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPY 404
+ WSL P+E PGL+D +G E+E LYTKYE EGKAK+VV+A+++W ++ +QIETG PY
Sbjct: 352 DAQWSLLDPHECPGLSDVYGKEYEELYTKYETEGKAKRVVKARDVWNTMVTTQIETGMPY 411
Query: 405 MLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMES 464
+L KD+ N K+ Q N GTIK SNLC E+++YTS ETAVC + SI L YV
Sbjct: 412 VLNKDSVNAKNMQSNAGTIKGSNLCAEIVEYTSKEETAVCVIGSIVLKNYV--------- 462
Query: 465 HPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGV 524
KN FDFE L + ++T+NL++ IDV Y V A SN R RP+G+GV
Sbjct: 463 -----------KNDAFDFEDLRKHVKVLTKNLDRSIDVMAYAVPEAETSNKRRRPVGVGV 511
Query: 525 QGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGI 584
QGL D F L MPFDS +A++LN++IFE IY+ A+ S E++ GP+ T+ GSP SKGI
Sbjct: 512 QGLQDVFFKLKMPFDSEQARKLNREIFEHIYFAAVEASCELSDEHGPHPTFEGSPASKGI 571
Query: 585 LQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY 644
+Q +WGV P DW GL + K GVRNSL A MPTAST+QI G+ E EP TSNIY
Sbjct: 572 MQYHLWGVTPQTALDWAGLESRV-KKGVRNSLTTALMPTASTAQICGSVEAAEPITSNIY 630
Query: 645 SRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWE 704
SRR L+GEF VVN +L+ +L G WS +KN+II + GS+QK+ I ++KA+YKT WE
Sbjct: 631 SRRTLAGEFPVVNSYLVRELIARGTWSEAMKNQIIANGGSIQKVIGIHPDVKAVYKTSWE 690
Query: 705 IKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAA 764
I KT++D+A DRG ++D +QS N+ + P +TS+ F+AW +GLKT +YY RS+ AA
Sbjct: 691 ISMKTVIDLAADRGAFVDQTQSQNLFLATPTLKSMTSMLFYAWKKGLKTLVYYTRSKPAA 750
Query: 765 DAIKFTVDTSV 775
+AI TVD +
Sbjct: 751 NAIAVTVDECI 761
>gi|307205346|gb|EFN83694.1| Ribonucleoside-diphosphate reductase large subunit [Harpegnathos
saltator]
Length = 701
Score = 728 bits (1878), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 366/710 (51%), Positives = 481/710 (67%), Gaps = 21/710 (2%)
Query: 51 VTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSG 110
+TT +LD LAA+ AA+M H DY LA RI +SNLHK TKK FSE I +Y+
Sbjct: 1 MTTVELDTLAADIAASMVNQHMDYEILAGRIAISNLHKETKKVFSEVITQLYHGNLSIMN 60
Query: 111 LKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHM 170
+ P I++ Y II ++A RL+S IIYDRDF+Y Y FK LE +LL++ GKVVERPQHM
Sbjct: 61 RRLPRISEKYYTIIQEHADRLNSAIIYDRDFNYSYTAFKILENKHLLRLNGKVVERPQHM 120
Query: 171 LMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEG 230
LMRVAV IH DD+D+AI+TY+++S+++ HA+ TL +A T + Q++S FL+ M +DSI+G
Sbjct: 121 LMRVAVSIHNDDVDNAIETYNLLSKQYIVHAAQTLNSACTVKQQMASSFLLTMSEDSIDG 180
Query: 231 IYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGG 290
I D+L+ A++ G IG +VH IRA + IRGT G SNG+VPMLR +N + V +
Sbjct: 181 ILDSLERVAVLCHHNGDIGFNVHCIRAKNTPIRGTGGVSNGLVPMLRAYNTSIPTVCRKN 240
Query: 291 GKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSL 350
+G VYLEPWH+DI++FL+L+++ G E+ RA+D+FYALW PD+FM RV + WSL
Sbjct: 241 --IEGPITVYLEPWHSDIYQFLELKRDIGDEQLRAKDMFYALWTPDIFMRRVFDDADWSL 298
Query: 351 FCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDT 410
CP+E PGL D WG EFE LY +YE+E + +K V+A++LW I + QI+TGTPY+++KD
Sbjct: 299 MCPHECPGLIDVWGDEFEALYIRYEEENRYRKQVKARDLWVFITQLQIQTGTPYIVYKDH 358
Query: 411 CNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLV 470
CN KSNQQNLGTI + TEVIQY++ E A C+LA+IA+ +V
Sbjct: 359 CNLKSNQQNLGTINCGSFSTEVIQYSASDEIAACHLATIAVDMFV--------------- 403
Query: 471 GSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADT 530
S + +DF KL +V IVT NL+K+IDVN YP+E S R R IGI GLAD
Sbjct: 404 ---NSTTKTYDFSKLKKVVKIVTYNLDKMIDVNLYPLEEVTFSAYRQRAIGISASGLADA 460
Query: 531 FILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMW 590
FIL+ PF+S EA++LN IFET YY AL S E+A +GPY TY GSPVSKGILQ +MW
Sbjct: 461 FILMRYPFESKEAKKLNVQIFETFYYGALEASCEMAIEDGPYATYEGSPVSKGILQYEMW 520
Query: 591 GVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLS 650
P+D WDW L+ I+K GVRNSLL+A +Q+LGNNE PYTSNI + S
Sbjct: 521 NAKPTDLWDWDTLKAKIAKYGVRNSLLIAQTSDTFMAQMLGNNESVGPYTSNICTMHASS 580
Query: 651 GEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTL 710
F V KHLL DL E GLWS + NKII + GS+Q I IP++LK +YKT WE+ QK +
Sbjct: 581 KLFPYVKKHLLRDLIEKGLWSEDMCNKIISNGGSIQDIDDIPDDLKLLYKTAWEMPQKRI 640
Query: 711 VDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRS 760
+MA RG +ID SQ LN+HM P+ KLTS+HF+AW GLK+ MY+ ++
Sbjct: 641 FEMAAARGPFIDQSQCLNVHMKDPS-DKLTSMHFYAWEIGLKSSMYHFKT 689
>gi|448932906|gb|AGE56464.1| ribonucleotide reductase large subunit [Paramecium bursaria
Chlorella virus NE-JV-1]
Length = 764
Score = 725 bits (1872), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 379/788 (48%), Positives = 511/788 (64%), Gaps = 48/788 (6%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSY---------GLSIEHCDPVLVSQ---KVCTGVY 48
M V+KRDG EAV FDKI R+ +L + G I+ V +S+ VC+ +
Sbjct: 8 MNVIKRDGSTEAVSFDKIMTRIGRLCWPEGGKPTHRGSRIQSGLDVDISRIVGSVCSSIV 67
Query: 49 KGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNER 108
+TT +LDEL A+ AA++TT +PDY LAARI VSNL K T S +T ++M +H
Sbjct: 68 DNITTVKLDELTADKAASLTTLNPDYGILAARIAVSNLQKQTTDSVVDTFEEM-SHLLSD 126
Query: 109 SGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQ 168
LK DVY I+ D + F T++R YL KV K+VERPQ
Sbjct: 127 DFLKNVRTYGDVYQSIVDYDRDFDFDYFG----------FSTMQRLYLTKVGSKIVERPQ 176
Query: 169 HMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLV-CMKDDS 227
H +RVA+ + +I+ +TY +S+R FTHASPTLFNAG ++ L+SCFLV C DDS
Sbjct: 177 HTYLRVAIALWGSNIERVKETYDALSRRKFTHASPTLFNAGFKKSNLASCFLVHC--DDS 234
Query: 228 IEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVD 287
+ I+ L + A +SK GGIG+ + +IR GS I+GTNG S+GIVPML+VF+ T+ Y +
Sbjct: 235 LSDIFKCLGDVAQLSKYGGGIGLHLSDIRGRGSAIKGTNGESDGIVPMLKVFDATSAYAN 294
Query: 288 QGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGL 347
QGG +RKG+FAVYLEP H DI +FL LR+N G E RAR+LFYA+W+ DLFM RV+++
Sbjct: 295 QGG-RRKGSFAVYLEPHHPDIMDFLLLRRNQGDESLRARNLFYAVWLNDLFMRRVEADAQ 353
Query: 348 WSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLF 407
WSL P+E PGL + +G E+E LY +YE EGKA KVV+A+++W ++ +QIETG PY+
Sbjct: 354 WSLLDPHECPGLTEAFGKEYEDLYVRYESEGKAVKVVKARDVWNSMVTTQIETGMPYVAN 413
Query: 408 KDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPS 467
KD+ N K+ Q N GTIK SNLC E+++YTS E AVC + SI L YV
Sbjct: 414 KDSVNAKNMQANAGTIKGSNLCCEILEYTSSEEIAVCVIGSIVLKNYV------------ 461
Query: 468 KLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
KN FDF+ L + I+ +NL++ IDV Y VE AR SN+R RPIG+GVQGL
Sbjct: 462 --------KNGKFDFDDLRKHVKILAKNLDRSIDVMSYAVEEARVSNMRRRPIGVGVQGL 513
Query: 528 ADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQP 587
D F L MPFDS A+ LN+DIFE IY+ A+ S E+A GP+ T+ GSP SKG++Q
Sbjct: 514 QDVFFKLKMPFDSEAARDLNRDIFEHIYFAAVEASCELADELGPHPTFEGSPASKGVMQY 573
Query: 588 DMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRR 647
+WGV P DW GL + + K GVRNSL A MPTAST+QI G+ E EP TSNIYSRR
Sbjct: 574 HLWGVTPQTALDWSGLEERV-KKGVRNSLTTALMPTASTAQICGSVEAMEPITSNIYSRR 632
Query: 648 VLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQ 707
L+GEF VVN +L+ +L G WS +K++II + GS+Q++ I ++KA+YKT WE+
Sbjct: 633 TLAGEFPVVNSYLVRELINRGTWSESMKDQIIANGGSIQRVIGIHPDVKAVYKTSWELSM 692
Query: 708 KTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAI 767
K+++DMA DRG ++D +QS+N+ + P +TS+ F+ W +GLKT +YYLRS+ AA+AI
Sbjct: 693 KSVIDMAADRGAFVDQTQSMNLFLASPTLKSVTSMLFYGWKKGLKTMLYYLRSKPAANAI 752
Query: 768 KFTVDTSV 775
+ TVD +
Sbjct: 753 QVTVDECI 760
>gi|310831538|ref|YP_003970181.1| putative ribonucleotide reductase large subunit [Cafeteria
roenbergensis virus BV-PW1]
Length = 922
Score = 710 bits (1832), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 396/899 (44%), Positives = 533/899 (59%), Gaps = 148/899 (16%)
Query: 2 YVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAA 61
YV+KRDG++E VHFDKIT R+ KL G ++ D + + +K T +Y G+TT +LD +A
Sbjct: 17 YVIKRDGRRENVHFDKITQRISKLLTGNMNKNIDIINIVKKTITSIYPGITTKELDNQSA 76
Query: 62 ETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADD-- 119
MT H DYA LA RI VS+LHK T K+F E K LI D+
Sbjct: 77 YQCGMMTPLHYDYALLAGRIYVSSLHKETMKTFVE---------------KMELINDNLH 121
Query: 120 VYD-----IIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRV 174
+YD I K+ +L+ I Y+RD+ +D+FG KT+ER+Y+ K+ G ++ERPQ + MRV
Sbjct: 122 IYDSEWIEFIKKHRNKLNKIIDYNRDYSFDFFGIKTMERTYITKLDGHLIERPQDVFMRV 181
Query: 175 AVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
A +H D+ I +Y++MS+++FTHASPTLFNAG + L SCFL+ +DS+ GI T
Sbjct: 182 ASLVHCGDLQKTIDSYNLMSKKYFTHASPTLFNAGNKKGNLVSCFLLGT-EDSMTGISKT 240
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A ISK GGIG+ + N+RA GS I+ TNG S+GIVPML+V+N RYV+Q G +RK
Sbjct: 241 WNDVAHISKWGGGIGIHISNVRAKGSEIKSTNGHSDGIVPMLQVYNSICRYVNQSG-RRK 299
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
G+FA YLEP HADIF+FL+LRKN G E RARDLF ALWV DLFM +V+ N W LFCP+
Sbjct: 300 GSFAFYLEPHHADIFDFLELRKNTGAESERARDLFLALWVSDLFMNQVKLNNDWYLFCPD 359
Query: 355 EAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKK 414
+APGL D +G E+E LY KY E K K ++A+ LW I+ +Q ETG+PYML+KD NKK
Sbjct: 360 KAPGLNDVYGDEYETLYWKYVSEEKYNKKIKARKLWEAIMTAQFETGSPYMLYKDNINKK 419
Query: 415 SNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVP-----MESHPSKL 469
SNQ+N+G I+SSNLC E+++Y+ TETA CNLASIALP +++ V + S P+ +
Sbjct: 420 SNQKNIGIIRSSNLCAEIVEYSDSTETAACNLASIALPNFIKSKNVSDNGWIVYSKPNCI 479
Query: 470 VGS-----RGSKNRYFDFEKLAEVTGIVTENLNKII------------------------ 500
+KN F+ EKL E+ + NL + I
Sbjct: 480 YCKWIKQMLINKNIKFE-EKLIEIDSVELYNLKQKIGKELITFPQVFLNNTLIGGMEETW 538
Query: 501 -----DVNY----------------------YPVETARRSNLRHRPIGIGVQGLADTFIL 533
D +Y YP + +RRSN+RHRPIG+G+QGLADT L
Sbjct: 539 IYFGKDYDYEKLWNVAYHVTQNLDSVIDKNYYPTKESRRSNMRHRPIGLGIQGLADTLAL 598
Query: 534 LGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAA-------------REGP--------- 571
L +P+ S A +N+ IF IY+ A+ S +IA E P
Sbjct: 599 LRVPYASKAALDINEKIFGIIYHAAVTASVDIAKEREEDMKLLLKYFEEHPKKKPSSEFY 658
Query: 572 ---YETY------------------------------HGSPVSKGILQPDMWGVNP---- 594
+E Y GSP S+G LQ +W P
Sbjct: 659 DDNFECYPKKIEKIYHKLRPHSTELDKTQFLGAYSTFEGSPFSEGKLQYHLWNRTPINIS 718
Query: 595 --SDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
+ W L + + K G RNSLL A MPTASTSQ+LGN E FEP+TSNIY+RR L+GE
Sbjct: 719 TLIEGKSWDSLINEMKKYGTRNSLLTALMPTASTSQLLGNYESFEPFTSNIYTRRTLAGE 778
Query: 653 FVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVD 712
F+VVNKHL++DL E+G W+ I+ K+I D+GS+Q I +P +K IY+T +E+KQK ++D
Sbjct: 779 FIVVNKHLINDLNEIGEWTNEIRQKVINDNGSIQNI-LLPNIIKNIYQTSYEMKQKYIID 837
Query: 713 MAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTV 771
RG YID +QS+N++ QP+ KLTS F+AW +GLKTG+YYLRS+ +A+A K TV
Sbjct: 838 GCSIRGAYIDQTQSMNLYFAQPDSQKLTSSQFYAWEQGLKTGLYYLRSKPSANATKITV 896
>gi|154278713|ref|XP_001540170.1| ribonucleoside-diphosphate reductase large subunit [Ajellomyces
capsulatus NAm1]
gi|150413755|gb|EDN09138.1| ribonucleoside-diphosphate reductase large subunit [Ajellomyces
capsulatus NAm1]
Length = 508
Score = 707 bits (1825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 319/455 (70%), Positives = 386/455 (84%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KRDG++E V FDKITAR+ +L YGL EH D ++QKV +GVY+GVTT +LD LA
Sbjct: 1 MFVYKRDGRKERVQFDKITARVSRLCYGLDPEHVDAAAITQKVISGVYQGVTTVELDNLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MT HPDYA+LAARI VSNLHK TKK FS I D+Y+++N ++ AP+I+
Sbjct: 61 AETAAYMTVTHPDYATLAARIAVSNLHKQTKKQFSSVIDDLYHYHNPKNQRPAPMISQTT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y+ +M++A +S I+YDRDF+Y YFGFKTLERSYLL++ GKV ERPQHM+MRVAVGIH
Sbjct: 121 YETVMRHADEFNSAIVYDRDFNYQYFGFKTLERSYLLRINGKVAERPQHMIMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD++ I+TY++MSQ++FTHASPTLFNAGTP+ Q++SCFL+ MK+DSIEGIYDTLK CA+
Sbjct: 181 DDVERVIETYNLMSQKFFTHASPTLFNAGTPQPQMASCFLIDMKEDSIEGIYDTLKTCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+++H IR TGSYI GTNG+SNGIVPMLRVFN+TARYVDQGG KR GAFA+Y
Sbjct: 241 ISKTAGGIGLNIHRIRGTGSYIAGTNGSSNGIVPMLRVFNNTARYVDQGGNKRPGAFAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIFEFLDLRKNHGKEE RARDLF ALW PDLFM+RV+ NG W+LFCPNEAPGLA
Sbjct: 301 LEPWHTDIFEFLDLRKNHGKEEVRARDLFLALWTPDLFMKRVEKNGEWTLFCPNEAPGLA 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE LY KYEKEG+ KK V+AQ LW+ IL++Q ETG P+ML+KD+CN+KSNQ+NL
Sbjct: 361 DVYGDEFEALYEKYEKEGRGKKTVKAQKLWYAILEAQTETGNPFMLYKDSCNRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYV 455
GTI+SSNLCTE+I+Y SP E AVCNLASIALP +V
Sbjct: 421 GTIRSSNLCTEIIEYCSPDEVAVCNLASIALPTFV 455
>gi|281339148|gb|EFB14732.1| hypothetical protein PANDA_021921 [Ailuropoda melanoleuca]
Length = 500
Score = 703 bits (1815), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 333/519 (64%), Positives = 405/519 (78%), Gaps = 22/519 (4%)
Query: 293 RKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFC 352
R GAFA+YLEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV++N WSL C
Sbjct: 1 RPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMC 60
Query: 353 PNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCN 412
PNE PGL + WG EFE+LY YEK+G+ +KVV+AQ LW+ I++SQ ETGTPYML+KD+CN
Sbjct: 61 PNECPGLDEVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCN 120
Query: 413 KKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGS 472
+KSNQQNLGTIK SNLCTE+++YTS E AVCNLAS+AL YV
Sbjct: 121 RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASVALNMYV----------------- 163
Query: 473 RGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
+ +DF+KLAEVT ++ NLNKIID+NYYPV A SN RHRPIGIGVQGLAD FI
Sbjct: 164 --TSEHTYDFKKLAEVTKVIVRNLNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFI 221
Query: 533 LLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGV 592
L+ PF+S EAQ LNK IFETIYY AL S ++A GPYETY GSPVS+GILQ DMW V
Sbjct: 222 LMRYPFESPEAQLLNKQIFETIYYGALEASCDLAREHGPYETYEGSPVSRGILQYDMWNV 281
Query: 593 NPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
P+D WDW L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGE
Sbjct: 282 TPTDLWDWKLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGE 341
Query: 653 FVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVD 712
F +VN HLL DLTE GLW+ +KN+II +GS+Q IP+IP++LK +YKTVWEI QKT++
Sbjct: 342 FQIVNPHLLKDLTERGLWNEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLK 401
Query: 713 MAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
MA +RG +ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR+R AA+ I+FT++
Sbjct: 402 MAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLN 461
Query: 773 TSVLKENPKVTDDDDA---KMAQMVCSLTNREECMACGS 808
LK+ K T +++ A MVCSL NREEC+ CGS
Sbjct: 462 KEKLKDKEKATKEEEEKERNTAAMVCSLENREECLMCGS 500
>gi|350588224|ref|XP_003129661.3| PREDICTED: ribonucleoside-diphosphate reductase large subunit
isoform 1 [Sus scrofa]
Length = 634
Score = 702 bits (1812), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 331/518 (63%), Positives = 404/518 (77%), Gaps = 21/518 (4%)
Query: 293 RKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFC 352
R GAFA+YLEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV++N WSL C
Sbjct: 136 RPGAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMC 195
Query: 353 PNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCN 412
PNE PGL + WG EFE+LY YE++G +KVV+AQ LW+ I++SQ ETGTPYML+KD+CN
Sbjct: 196 PNECPGLDEVWGEEFEKLYESYERQGHVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCN 255
Query: 413 KKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGS 472
+KSNQQNLGTIK SNLCTE+++YTS E AVCNLAS+AL YV
Sbjct: 256 RKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV----------------- 298
Query: 473 RGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
+ +DF KLAEVT ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FI
Sbjct: 299 --TSEHTYDFTKLAEVTKVIVRNLNKIIDINYYPIPEASLSNKRHRPIGIGVQGLADAFI 356
Query: 533 LLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGV 592
L+ PF+S EAQ LNK IFETIYY AL S ++A GPYETY GSPVSKGILQ DMW V
Sbjct: 357 LMRYPFESPEAQLLNKQIFETIYYGALEASCDLAKEYGPYETYEGSPVSKGILQYDMWNV 416
Query: 593 NPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
P+D WDW L++ I+K G+RNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGE
Sbjct: 417 TPTDLWDWKLLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGE 476
Query: 653 FVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVD 712
F +VN HLL DLTE GLW+ +KN+II +GS+Q IP+IP++LK +YKTVWEI QKT++
Sbjct: 477 FQIVNPHLLKDLTERGLWNEEMKNQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLK 536
Query: 713 MAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
MA +RG +ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR+R AA+ I+FT++
Sbjct: 537 MAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLN 596
Query: 773 TSVLKENPKVTDDDDA--KMAQMVCSLTNREECMACGS 808
LK+ KV+ +++ A MVCSL NR+EC+ CGS
Sbjct: 597 KEKLKDKEKVSKEEEKERNTAAMVCSLENRDECLMCGS 634
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/160 (48%), Positives = 109/160 (68%), Gaps = 6/160 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG+QE V FDKIT+R++KL YGL+++ DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT HPDYA LAARI VSNLHK TKK FS+ ++D++N+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLFNYINPHNGKHSPMVARST 120
Query: 121 YDIIMKNA------ARLDSEIIYDRDFDYDYFGFKTLERS 154
DI++ N R + IY + D F F L+++
Sbjct: 121 LDIVLANKDVCIMLFRPGAFAIYLEPWHLDIFEFLDLKKN 160
>gi|269859792|ref|XP_002649620.1| ribonucleoside-diphosphate reductase large chain [Enterocytozoon
bieneusi H348]
gi|220066983|gb|EED44452.1| ribonucleoside-diphosphate reductase large chain [Enterocytozoon
bieneusi H348]
Length = 769
Score = 701 bits (1809), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/789 (44%), Positives = 502/789 (63%), Gaps = 40/789 (5%)
Query: 20 ARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAA 79
+R+K +I D ++V +G+ +T ++ + +E AA+M T HP+Y LA+
Sbjct: 14 SRIKAFVEEFNITSIDLKNYFKQVSSGLAMEMTCEEMSKYCSEVAASMITLHPNYNKLAS 73
Query: 80 RIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDR 139
I++ LH +T ++FSE +++ N + +D+ ++ + D I
Sbjct: 74 VILIKYLHCSTHENFSERFLLLHSELN--------IFDEDIVQLVKLHRKYYDDIIDSTN 125
Query: 140 DFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFT 199
D+ +DYFG TL ++YL K+ +VERPQ + M+VA+ +H+ + D TY ++S ++T
Sbjct: 126 DYLFDYFGLITLFKTYLNKINNSIVERPQDIYMKVAIQLHRSNFDDVKTTYELLSNFYYT 185
Query: 200 HASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATG 259
H +PTL+N+ + Q++SCFL+ MKDDS+EGI++T+K+CA I K GGIG+ + NIR
Sbjct: 186 HGTPTLYNSCLKKPQMASCFLLAMKDDSVEGIFETIKDCASIRKFNGGIGMYLTNIRPNK 245
Query: 260 SYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHG 319
S I T G + GI+P++R+ ++T +Y ++ KR + A YLEPWH DIF+FL+LRKN G
Sbjct: 246 SKINSTGGEAKGIIPVIRLISETIKYFNKNETKRSTSCAFYLEPWHPDIFDFLNLRKNTG 305
Query: 320 KEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGK 379
E+ RARD F L++ D+FMERVQ+N WSLF P+ A GL + WG EF +LY YEK
Sbjct: 306 PEDMRARDAFIGLFINDIFMERVQNNENWSLFDPSIATGLINAWGDEFNKLYEYYEK-TI 364
Query: 380 AKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPT 439
K + AQ LW EI+ +QIETGTPY+++KD+CN+ SNQ NLGTIKSSNLC E+I+Y+
Sbjct: 365 PKITIPAQKLWKEIICAQIETGTPYLVYKDSCNRNSNQNNLGTIKSSNLCAEIIEYSDAN 424
Query: 440 ETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKI 499
T VCNLASI LP+++ FDF++L +V VT NLNK+
Sbjct: 425 ITGVCNLASICLPKFINNAN-------------------QFDFKQLYQVMKKVTINLNKL 465
Query: 500 IDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHAL 559
ID+++YP + A+ SN RPIGIGVQGLAD + +PF+S++A++LN+ IFET+YY +
Sbjct: 466 IDISFYPTKEAKYSNEATRPIGIGVQGLADALCKMRIPFESSQAKELNRMIFETMYYSVM 525
Query: 560 RTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP-----SDRWDWGGLRDMISKNGVRN 614
TS E+A GPY S SKGI + + N S WDW LR+ I GVRN
Sbjct: 526 ETSMELAKTYGPYPLITNSMYSKGIFHFEKYLKNKNIDILSGLWDWEDLREKIRLYGVRN 585
Query: 615 SLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPII 674
SL ++ MPTA+T+QI GN+EC EP TSNIY+RR GEF +VNK+L++DL ++GLWS +
Sbjct: 586 SLTLSIMPTATTAQICGNSECVEPITSNIYTRRTFVGEFQIVNKYLMNDLIKLGLWSNEM 645
Query: 675 KNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQP 734
K II +GS+Q IP IP +K +YKTVWEIK K ++DMA +R ++D SQSLN+ + QP
Sbjct: 646 KQLIIEYNGSIQNIPTIPSNIKNLYKTVWEIKMKCILDMAHERQAFVDQSQSLNLFISQP 705
Query: 735 NFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAKMAQMV 794
+ L+S+HF+ W GLKTG+YYLR+ A AIKFT+D ++ +D+
Sbjct: 706 TYAILSSMHFYGWKLGLKTGIYYLRTSPIASAIKFTIDKELIIRTLSSMKNDE------- 758
Query: 795 CSLTNREEC 803
C N +EC
Sbjct: 759 CEPPNCKEC 767
>gi|385303449|gb|EIF47522.1| ribonucleoside-diphosphate reductase large chain 1 [Dekkera
bruxellensis AWRI1499]
Length = 466
Score = 698 bits (1801), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 313/455 (68%), Positives = 388/455 (85%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV KRD ++E V FDKITAR+ ++ YGL DPV V+Q+V TGVY GVTT +LD L
Sbjct: 1 MYVFKRDXRREPVRFDKITARISRMCYGLDEXRIDPVAVAQRVVTGVYPGVTTIELDNLT 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA MTT HPDYA+LAAR+ +SNLHK TKK FS+ I+D+YN+YN ++ K+P+I+++V
Sbjct: 61 AETAAYMTTIHPDYATLAARLAISNLHKQTKKPFSDVIEDLYNYYNPKTQKKSPMISEEV 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y I+MK+ L+S I YDRDF Y+YFGFKTLERSYLL++ GKV ERPQH+LMRVAVGIH
Sbjct: 121 YKIVMKHKDELNSAINYDRDFSYNYFGFKTLERSYLLRINGKVAERPQHLLMRVAVGIHG 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DDI +++Y +MS+R+FTHASPTLFNAGTPR Q+SSCFLV MKDDSIEGIYDTLK+CA+
Sbjct: 181 DDIPKVLESYDLMSKRYFTHASPTLFNAGTPRPQMSSCFLVAMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK+AGGIG+ +HNIR+TGSYI GTNGTSNGI+PM+RVFN TARYVDQGG KR GA A+Y
Sbjct: 241 ISKTAGGIGLHIHNIRSTGSYIAGTNGTSNGIIPMVRVFNSTARYVDQGGNKRPGAIAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADIF+F+D+RKNHGKEE RARDLF ALW+PDLFM+RV+ N W+LF P+EAPGL+
Sbjct: 301 LEPWHADIFDFIDIRKNHGKEEIRARDLFPALWIPDLFMKRVEQNDTWTLFSPSEAPGLS 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EFE+LYT+YEKEG+ ++ V+AQ LW++IL++Q ETGTP+M++KD CN+KSNQ+NL
Sbjct: 361 DVYGDEFEKLYTRYEKEGRGRRTVKAQKLWYQILEAQTETGTPFMIYKDACNRKSNQKNL 420
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYV 455
GTIKSSNLC EV++Y+SP E VCNLA+I LP +V
Sbjct: 421 GTIKSSNLCCEVVEYSSPDEVGVCNLANICLPAFV 455
>gi|349605784|gb|AEQ00901.1| Ribonucleoside-diphosphate reductase large subunit-like protein,
partial [Equus caballus]
Length = 492
Score = 683 bits (1763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/511 (63%), Positives = 397/511 (77%), Gaps = 22/511 (4%)
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLF +RV+SN WSL CPNE PGL
Sbjct: 1 LEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFKKRVESNQDWSLMCPNECPGLD 60
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
+ WG EFE+LY YEK+G+ +KVV+AQ LW+ I++SQ ETGTPYML+KD+CN+KSNQQNL
Sbjct: 61 EVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNL 120
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYF 480
GTIK SNLCTE+++YTS E AVCNLAS+AL +V + +
Sbjct: 121 GTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMFV-------------------TSEHTY 161
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
DF+KLAEVT ++ NLNKIID+NYYP+ A SN RHRPIGIGVQGLAD FIL+ PF+S
Sbjct: 162 DFQKLAEVTKVIVRNLNKIIDINYYPIPEACLSNKRHRPIGIGVQGLADAFILMRYPFES 221
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDW 600
EAQ LNK IFETIYY AL S +++ +GPYETY GSPVSKGILQ DMW V P+D WDW
Sbjct: 222 PEAQLLNKQIFETIYYGALEASCDLSKEDGPYETYEGSPVSKGILQYDMWNVTPTDLWDW 281
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
L++ I+K GVRNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HL
Sbjct: 282 KLLKEKIAKYGVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHL 341
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
L DLTE GLW+ +KN+II +GS+Q I +IP++LK +YKTVWEI QKT++ MA +RG +
Sbjct: 342 LKDLTERGLWNEEMKNQIIACNGSIQSIQEIPDDLKQLYKTVWEISQKTILKMAAERGAF 401
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYLR+R AA+ I+FT++ LK+
Sbjct: 402 IDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKE 461
Query: 781 KVTDDDDA---KMAQMVCSLTNREECMACGS 808
K + +++ A MVCSL NR+EC+ CGS
Sbjct: 462 KASKEEEEKERNTAAMVCSLENRDECLMCGS 492
>gi|347756559|ref|YP_004864122.1| ribonucleoside-diphosphate reductase subunit alpha [Candidatus
Chloracidobacterium thermophilum B]
gi|347589076|gb|AEP13605.1| ribonucleoside-diphosphate reductase, alpha subunit [Candidatus
Chloracidobacterium thermophilum B]
Length = 800
Score = 666 bits (1718), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/820 (43%), Positives = 496/820 (60%), Gaps = 51/820 (6%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V KR+G E V +KI + + GL+ + D V+ K G+Y G TT++LD+L+
Sbjct: 17 MRVRKRNGSYEPVDVNKIIRAVGRCCTGLT--NIDAYRVATKTIGGLYDGATTAELDQLS 74
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLI 116
TAA++ P+Y+ LAAR++ + +HK + SFS++I +G LI
Sbjct: 75 INTAASLIVEEPEYSRLAARLLATYIHKEVRNQNIYSFSQSIT---------AGYDLGLI 125
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRV 174
D V + + +N +LD I +RD ++YFG +T+ YLLK V+E PQ+ +RV
Sbjct: 126 NDRVRNFVSENRRKLDEAICDERDQAFEYFGLRTVYDRYLLKHPTSRAVLETPQYFFLRV 185
Query: 175 AVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
A G+ + + AI+ Y ++S + ++PTLFNAGT QLSSCFL+ +D + IY
Sbjct: 186 ASGLAQT-VAEAIELYQLLSSLEYMASTPTLFNAGTRHEQLSSCFLLDSPEDDLAAIYQK 244
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A++SK AGGIG++ H +R+ GS IRGTNG SNGIVP L+ + + V+QGG KRK
Sbjct: 245 YTDVALLSKFAGGIGLAYHRVRSKGSLIRGTNGHSNGIVPWLKTLDSSVAAVNQGG-KRK 303
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA VYLEPWHADI +FL+LR N G E R +L A W+PDLFM+RV+ +G WSLF P
Sbjct: 304 GACCVYLEPWHADIEDFLELRDNTGDEARRTYNLNLANWIPDLFMKRVEEDGPWSLFDPK 363
Query: 355 EAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKK 414
P L D +G EFE Y K E E + ++A++L+ ++++ +TG +M FKD N+K
Sbjct: 364 LVPHLPDLYGEEFEAAYLKAESEKLYTRQIRARDLYQRMMRTLAQTGNGWMTFKDAANRK 423
Query: 415 SNQ--QNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGS 472
NQ Q + SNLCTE+I+ TSPTETAVCNL S+ L R+V
Sbjct: 424 CNQTAQPGRVVHLSNLCTEIIEVTSPTETAVCNLGSLNLARHV----------------- 466
Query: 473 RGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
+ FDFEKLA I L+++ID+N+YP+ + SN R RPIG+G+ GL D F
Sbjct: 467 ---TDGRFDFEKLARNVRIAVRQLDRVIDINFYPIPSTAASNRRWRPIGLGLMGLQDVFF 523
Query: 533 LLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGV 592
L +PFDS EA +L+ I E +YYHAL S ++A GP+ + + ++GILQ D+WGV
Sbjct: 524 QLRLPFDSPEALELSTRIQEEVYYHALAASCDLAEVHGPHPAFPETRAAQGILQFDLWGV 583
Query: 593 NPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
P D W LR+ I G+RNSLL+A PTA+ + I G E EP SN++ R LSG+
Sbjct: 584 TPPDPERWKALRERIRATGLRNSLLIAIAPTATIASICGCYEAIEPQVSNLFKRETLSGD 643
Query: 653 FVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVD 712
F+ +N++L+ DL +GLW+ I+ +I DGS+Q I IPE+L+ +Y+T WE+ + L+D
Sbjct: 644 FLQINRYLVEDLKRLGLWNEDIRTQIKLADGSIQGIAAIPEDLRRLYRTAWELPMRALID 703
Query: 713 MAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
MA RG YID SQSLN+ M+ P+ GKL+S++ +AW +GLKT YYLRSR A K TV
Sbjct: 704 MAAARGAYIDQSQSLNLFMESPSIGKLSSMYMYAWKKGLKT-TYYLRSRPATTIAKATVA 762
Query: 773 TSVLKEN------PKVTDDDDAKMAQMVCSLTNREECMAC 806
+ P+ T DDA +A CSL N E C AC
Sbjct: 763 PTAAGTGGNGPGAPQPTPSDDAALA---CSLANPESCEAC 799
>gi|323450453|gb|EGB06334.1| hypothetical protein AURANDRAFT_54285 [Aureococcus anophagefferens]
Length = 555
Score = 663 bits (1710), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 312/496 (62%), Positives = 384/496 (77%), Gaps = 17/496 (3%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M VVKR+GK+E V +DKIT+R+KKL YG ++ P ++QKV GVY GVTT +LDELA
Sbjct: 7 MQVVKRNGKKETVRYDKITSRIKKLCYGFDAKYIKPNQITQKVIQGVYDGVTTHELDELA 66
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
A+T A M T HPD++ LAARI VSNLHK+T K+FS+ ++ ++ H + ++ A LI+D+
Sbjct: 67 AQTTAYMATQHPDFSVLAARISVSNLHKSTDKTFSDVVEKLHKHVHPKTKKPAALISDET 126
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
Y + K+ +++ I+YDRDF+YDYFGFKTLERSYL+++ G + ERPQHM+MRVA+GIH
Sbjct: 127 YATVQKHKDAINAAIVYDRDFEYDYFGFKTLERSYLMRLDGAIAERPQHMIMRVALGIHG 186
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DD+ A +TY MMSQ+ FTHA+PTLFNAGTPR QLSSCFL+ MK+DSIEGIYDTLK CA
Sbjct: 187 DDLAGAFETYEMMSQKMFTHATPTLFNAGTPRPQLSSCFLLAMKEDSIEGIYDTLKRCAA 246
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+SVHNIRAT SYI G+NGTSNGIVPMLRV+NDTARYVDQGG +RKG+FA+Y
Sbjct: 247 ISKYAGGIGLSVHNIRATDSYICGSNGTSNGIVPMLRVYNDTARYVDQGGRRRKGSFAIY 306
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWHADI +LDL+KNHG E RARDLFY LW+PDLFM+RV++NG WSL CPNE PGLA
Sbjct: 307 LEPWHADIEMWLDLKKNHGNELERARDLFYGLWIPDLFMKRVEANGFWSLMCPNECPGLA 366
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
DC G +FE LY +YE EG A+K + AQ LWF IL SQ+ETGTPYML+KD CN KSNQ++L
Sbjct: 367 DCHGAKFEALYERYEAEGCARKAIPAQQLWFAILDSQVETGTPYMLYKDACNGKSNQKHL 426
Query: 421 GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYV------------REMGVPMESHPSK 468
GTIKSSNLCTE+++YT+P E AVCNLASI L V R V +H SK
Sbjct: 427 GTIKSSNLCTEIVEYTAPDEIAVCNLASINLGSEVSGATHNSKRLGRRRFEVSGATHNSK 486
Query: 469 LVGSRGSKNRYFDFEK 484
+G R FD+ +
Sbjct: 487 RLG-----RRRFDYSR 497
>gi|301792342|ref|XP_002931138.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like,
partial [Ailuropoda melanoleuca]
Length = 477
Score = 660 bits (1704), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 314/496 (63%), Positives = 384/496 (77%), Gaps = 22/496 (4%)
Query: 316 KNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYE 375
KN GKEE RARDLF+ALW+PDLFM+RV++N WSL CPNE PGL + WG EFE+LY YE
Sbjct: 1 KNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPNECPGLDEVWGEEFEKLYESYE 60
Query: 376 KEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQY 435
K+G+ +KVV+AQ LW+ I++SQ ETGTPYML+KD+CN+KSNQQNLGTIK SNLCTE+++Y
Sbjct: 61 KQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDSCNRKSNQQNLGTIKCSNLCTEIVEY 120
Query: 436 TSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTEN 495
TS E AVCNLAS+AL YV + +DF+KLAEVT ++ N
Sbjct: 121 TSKDEVAVCNLASVALNMYV-------------------TSEHTYDFKKLAEVTKVIVRN 161
Query: 496 LNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIY 555
LNKIID+NYYPV A SN RHRPIGIGVQGLAD FIL+ PF+S EAQ LNK IFETIY
Sbjct: 162 LNKIIDINYYPVPEACLSNKRHRPIGIGVQGLADAFILMRYPFESPEAQLLNKQIFETIY 221
Query: 556 YHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNS 615
Y AL S ++A GPYETY GSPVS+GILQ DMW V P+D WDW L++ I+K G+RNS
Sbjct: 222 YGALEASCDLAREHGPYETYEGSPVSRGILQYDMWNVTPTDLWDWKLLKEKIAKYGIRNS 281
Query: 616 LLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIK 675
LL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF +VN HLL DLTE GLW+ +K
Sbjct: 282 LLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQIVNPHLLKDLTERGLWNEEMK 341
Query: 676 NKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPN 735
N+II +GS+Q IP+IP++LK +YKTVWEI QKT++ MA +RG +ID SQSLNIH+ +PN
Sbjct: 342 NQIIACNGSIQSIPEIPDDLKQLYKTVWEISQKTVLKMAAERGAFIDQSQSLNIHIAEPN 401
Query: 736 FGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDA---KMAQ 792
+GKLTS+HF+ W +GLKTGMYYLR+R AA+ I+FT++ LK+ K T +++ A
Sbjct: 402 YGKLTSMHFYGWKQGLKTGMYYLRTRPAANPIQFTLNKEKLKDKEKATKEEEEKERNTAA 461
Query: 793 MVCSLTNREECMACGS 808
MVCSL NREEC+ CGS
Sbjct: 462 MVCSLENREECLMCGS 477
>gi|356927904|gb|AET42694.1| ribonucleoside diphosphate reductase [Emiliania huxleyi virus 202]
Length = 491
Score = 659 bits (1701), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/494 (62%), Positives = 381/494 (77%), Gaps = 20/494 (4%)
Query: 285 YVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQS 344
++ GGGKRKGAFA+YLEP HADIFEFL+LR+N GKEE RARDLFYALW+ D FM+RV++
Sbjct: 12 FIVIGGGKRKGAFAMYLEPHHADIFEFLELRRNTGKEELRARDLFYALWISDHFMQRVEA 71
Query: 345 NGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPY 404
WSLFCP+E PGLAD WG ++ +LY KYE +GKA+K + AQ LWF I+ SQIETGTPY
Sbjct: 72 GKDWSLFCPHECPGLADVWGDDYVKLYEKYESDGKARKTIPAQKLWFAIMDSQIETGTPY 131
Query: 405 MLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMES 464
ML+KD+CN+KSNQQ+LGTI+ SNLCTE+I+YT+ ETAVCNLASIALP +V++
Sbjct: 132 MLYKDSCNRKSNQQHLGTIQQSNLCTEIIEYTASDETAVCNLASIALPIFVKD------- 184
Query: 465 HPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGV 524
GS FD ++L +VT T NL+K+ID NYYP+ A RSN+RHRPIG+GV
Sbjct: 185 ---------GS----FDHQELYDVTYHATCNLDKVIDKNYYPIPEAERSNMRHRPIGLGV 231
Query: 525 QGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGI 584
QGLAD F++L M FDS EA+ LNK+IFET+Y+ A+ S ++A +G Y TY GSP+SKG+
Sbjct: 232 QGLADVFMMLKMAFDSIEARVLNKEIFETMYFAAMTASCDLAKTKGKYPTYEGSPLSKGV 291
Query: 585 LQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY 644
Q DMW V PSDRWDW LR I ++G RNSLL++PMPTAST+QILGNNEC EP+TSN+Y
Sbjct: 292 FQFDMWNVTPSDRWDWDTLRGNIKEHGARNSLLISPMPTASTAQILGNNECMEPFTSNLY 351
Query: 645 SRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWE 704
SRRVLSGEF VVN+HL+ DL+E+GLW+ +KN II +GSVQ IP PE+LK IYKTVWE
Sbjct: 352 SRRVLSGEFAVVNRHLVKDLSELGLWNDKMKNYIIAANGSVQNIPGFPEDLKPIYKTVWE 411
Query: 705 IKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAA 764
I +TL+ MA DRG +I SQS N+ M P KLTS+HF+ W GLKTG YY+RSR AA
Sbjct: 412 ISMRTLIHMAADRGAFICQSQSFNVFMTAPTSAKLTSMHFYGWKSGLKTGSYYIRSRPAA 471
Query: 765 DAIKFTVDTSVLKE 778
DAIKFTVDTS E
Sbjct: 472 DAIKFTVDTSDTSE 485
>gi|168702495|ref|ZP_02734772.1| ribonucleoside-diphosphate reductase, alpha subunit [Gemmata
obscuriglobus UQM 2246]
Length = 797
Score = 656 bits (1693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/814 (42%), Positives = 485/814 (59%), Gaps = 52/814 (6%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V KR G E V+ +KI +++ S GL DP+ V+ K G+Y G TT++LD L+
Sbjct: 27 MQVRKRSGALEDVNVNKIVRAVQRCSGGLP--GVDPMRVAVKTIGGLYDGATTAELDRLS 84
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLI 116
+TAA + + P+Y+ LAAR++ + + K SFS++I Y H L+
Sbjct: 85 IQTAAGLISEEPEYSRLAARLLATYVDKEVANQDVHSFSQSIAAGYRHG---------LV 135
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGK--VVERPQHMLMRV 174
A + NA +L++ ++YFG +T+ YLL+ V+E P +RV
Sbjct: 136 AGGTMAFVAANARKLNAAAAEPAPDLFEYFGLRTVYDRYLLRHPDTRHVIETPAFFFLRV 195
Query: 175 AVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
A G+ + D AI+ Y +MS + ++PTLFN+GT R Q+SSC+L+ D++E IYD
Sbjct: 196 ACGLAESAAD-AIELYRLMSAHRYLPSTPTLFNSGTARPQMSSCYLLDSPADALEAIYDR 254
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK AGGIG++ H IR+ GS IRGTNG SNGIVP L+ + + V+QGG KRK
Sbjct: 255 YADVAKLSKFAGGIGLAYHRIRSRGSLIRGTNGHSNGIVPWLKTLDSSVAAVNQGG-KRK 313
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA VYLE WHAD+ EFL+LR N G R +L A WVPDLFM RV++ WSLF P
Sbjct: 314 GACCVYLETWHADVEEFLELRDNTGDPARRTYNLNLANWVPDLFMRRVEAGEPWSLFDPK 373
Query: 355 EAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKK 414
P L D +G F+ YT E +G A K V A++L+ ++K+ ETG +M FKD CN+
Sbjct: 374 AVPHLTDLFGAAFDAAYTDAEAKGLAVKSVPARDLYARMMKTLAETGNGWMTFKDACNRA 433
Query: 415 SNQ--QNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGS 472
NQ + + SSNLCTE+++ TS ETAVCNL S+ L R+V G
Sbjct: 434 CNQTAEPGAVVHSSNLCTEIVEVTSAGETAVCNLGSVNLARHVTRDG------------- 480
Query: 473 RGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
FDF LAE L++++DVN+YP A SN R RP+G+GV GL D F
Sbjct: 481 -------FDFAALAETVRTAVRFLDRVVDVNFYPTPEAAASNARWRPVGLGVMGLQDVFF 533
Query: 533 LLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGV 592
L +PFD+ A++L++ I E IYYHAL TS E+AA GP+ ++ + + G+LQ D+WGV
Sbjct: 534 KLKLPFDAPAARELSRRIQEEIYYHALATSCELAAARGPHPSFASTRAAAGVLQFDLWGV 593
Query: 593 NPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
P+D W LR+ + G+RNSLLVA PTA+ + I+G EC EP SN++ R LSGE
Sbjct: 594 EPTDPARWAALRERVRTTGLRNSLLVAIAPTATIASIVGAYECVEPQVSNLFKRETLSGE 653
Query: 653 FVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVD 712
F+ VN++L+ DL +GLW+ ++ KI DGSVQ + ++P L+A+Y+T WE+ Q+ L+D
Sbjct: 654 FLQVNRYLVDDLKALGLWTDAVRTKIKLADGSVQSLSELPAGLRAVYRTAWEVPQRGLID 713
Query: 713 MAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
MA +RG +ID SQSLN+ ++ P GK++S++ HAW +GLKT YYLRSR A K TV
Sbjct: 714 MAAERGPFIDQSQSLNLFLESPTIGKMSSMYMHAWKKGLKT-TYYLRSRPATAIAKTTV- 771
Query: 773 TSVLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
P D + ++ CSL N C AC
Sbjct: 772 ------TPTAAPADTSAVS---CSLENPGACEAC 796
>gi|456737525|gb|EMF62220.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Stenotrophomonas maltophilia EPM1]
Length = 800
Score = 655 bits (1691), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/814 (42%), Positives = 490/814 (60%), Gaps = 48/814 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V KR+G E V +KI +++ S GL DP+ V+ + +G+Y G TT +LDEL+
Sbjct: 26 MSVTKRNGTTELVDLNKIVRAVQRSSEGL--HAVDPMRVATRTISGLYNGATTRELDELS 83
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLI 116
TAA + P+Y LAAR++ + + K +FS+++ G + LI
Sbjct: 84 IRTAALLIGEEPEYGRLAARLLANYIAKEVSGQEIYAFSQSVS---------RGHEVGLI 134
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKV--QGKVVERPQHMLMRV 174
D + + + NA +L+ I D ++DYFG +TL YLL+ KV+E PQ +R+
Sbjct: 135 NDRLLNFVQTNARKLNDAIDISLDLNFDYFGLRTLYDRYLLRHPHTRKVIETPQQFFLRI 194
Query: 175 AVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
A + +D+ + Y M + +SPTLFN+GT QLSSCFL+ DS+E IY
Sbjct: 195 ASAL-SEDVSETLALYKRMGNLDYLPSSPTLFNSGTTHEQLSSCFLLDSPQDSLESIYSK 253
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK +GGIGVS +R+ GS I+ TNG SNGIVP L+ + + V+QGG KRK
Sbjct: 254 YGDIAQLSKFSGGIGVSYTRVRSRGSLIKSTNGHSNGIVPWLKTMDSSVAAVNQGG-KRK 312
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA VYLE WHADI +FL+LR N G E RA +L A WVPDLFM+RV+++ WSLF P
Sbjct: 313 GAACVYLETWHADIEDFLELRDNTGDEARRAHNLNLANWVPDLFMKRVEADQEWSLFDPR 372
Query: 355 EAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKK 414
P D +G FE Y + E +GKA + + A+ L+ ++++ ETG +M FKD CN+
Sbjct: 373 VVPEFTDLFGEAFEAAYLQAEAQGKANRTISARKLYARMMRTLAETGNGWMTFKDKCNRA 432
Query: 415 SNQ--QNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGS 472
SNQ + I SNLCTE+++ TS ETAVCNL SI L G+
Sbjct: 433 SNQTLRPGNVIHLSNLCTEILEVTSNDETAVCNLGSINL-------------------GN 473
Query: 473 RGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
++ FDFEKLAE + L+++ID+N+YP+ETARR+NLR RP+G+G GL D F
Sbjct: 474 HFDEHNEFDFEKLAETVRLAVRQLDRVIDLNFYPIETARRANLRWRPVGLGCMGLQDVFF 533
Query: 533 LLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGV 592
MPFDS EA+ L+K I E IY+HAL TS E+A G + +++ + + G LQ D W V
Sbjct: 534 RKRMPFDSAEARALSKKIAEAIYFHALETSCELAQERGKHPSFNDTRAASGELQFDAWNV 593
Query: 593 NPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
P D W LR I ++G+RNSL++A PTA+ + I G EC EP SN++ R LSG+
Sbjct: 594 VPEDTARWDALRSRIKEHGLRNSLMIAIAPTATIASIAGCYECVEPQVSNLFKRETLSGD 653
Query: 653 FVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVD 712
F+ VN++L+++L ++GLW+P +++ I +GS+ + QIPE L+ +Y+T WE+ ++L+D
Sbjct: 654 FLQVNRYLVNELKKLGLWTPEMRDAIKLAEGSIAGVAQIPETLREVYRTAWELPMRSLID 713
Query: 713 MAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
MA +RG +ID S SLN+ M+ PN G ++S++ +AW +G+KT YYLRSR A K TV
Sbjct: 714 MAAERGAFIDQSASLNLFMESPNIGAMSSMYMYAWKQGIKT-TYYLRSRPATKIAKTTVS 772
Query: 773 TSVLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
+ KV D+A + CSL N E C AC
Sbjct: 773 AAA---PAKVFSPDEA----IACSLENPEACEAC 799
>gi|442322489|ref|YP_007362510.1| ribonucleoside-diphosphate reductase [Myxococcus stipitatus DSM
14675]
gi|441490131|gb|AGC46826.1| ribonucleoside-diphosphate reductase [Myxococcus stipitatus DSM
14675]
Length = 833
Score = 654 bits (1687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/820 (42%), Positives = 495/820 (60%), Gaps = 47/820 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V KR+G E+V +KI + K GLS D + V+ K +G+Y G TT +LD L+
Sbjct: 46 MRVRKRNGTAESVDLNKIVRAVGKSCVGLS--RVDVMRVATKTISGLYDGATTRELDSLS 103
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLI 116
+TAAA+ P+YA L+AR++ + + K SFS+++ +G K LI
Sbjct: 104 IQTAAALIVEEPEYARLSARLLATFIQKEVSNQDIHSFSQSVA---------AGHKHGLI 154
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRV 174
AD + + NA +L++ I R+ ++YFG +T+ YLLK +V+E PQ +RV
Sbjct: 155 ADRLLQFVQANARKLNAAIDPTRNDLFEYFGLRTVYDRYLLKNPQTREVLETPQEFFLRV 214
Query: 175 AVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
A + D+ AI+ Y + S + +SPTLFN+GT QLSSCFL+ D ++ IY
Sbjct: 215 ACALSGDNAREAIELYRLFSSLEYLPSSPTLFNSGTRHEQLSSCFLLDSPADDLDAIYRK 274
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A++SK +GGIGV H +RA GS IR TNG SNGIVP L+ + + V+QGG KRK
Sbjct: 275 YSDIAMLSKFSGGIGVGYHRVRARGSLIRSTNGHSNGIVPWLKTLDASVAAVNQGG-KRK 333
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA VYLE WHADI +FL+LR+N G E R +L A WVPDLFM+RV+S G WSLF P
Sbjct: 334 GACCVYLESWHADIEDFLELRENTGDEARRTHNLNLANWVPDLFMKRVESEGDWSLFDPK 393
Query: 355 EAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKK 414
P L D +G EFE+ Y + E G A + V+A++L+ ++K+ +TG +M FKD N+K
Sbjct: 394 VVPHLTDLFGAEFEKAYVEAEASGLAMRKVKARDLYARMMKTLAQTGNGWMTFKDISNRK 453
Query: 415 SNQQNL--GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGS 472
SNQ L I SNLCTE+++ TS ETAVCNL S+ L R V
Sbjct: 454 SNQTGLPQNVIHLSNLCTEILEVTSQGETAVCNLGSLNLGRMV----------------- 496
Query: 473 RGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
+ FDFE+L + + L+++ID+NYYP+ TA SN R RP+G+G+ GL D F
Sbjct: 497 ---VDGKFDFERLRANAQLALKQLDRVIDLNYYPIPTAADSNRRWRPVGLGLMGLQDVFF 553
Query: 533 LLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGV 592
L + FD+ EA+ L+K I E IY+ AL TS E+A + G + ++ + ++G Q WGV
Sbjct: 554 QLKLAFDAPEARALSKKISEEIYFAALTTSCELAEQFGAHPSFPETRAAQGEFQFASWGV 613
Query: 593 NPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
P D W LR I K+G+RNSL++A PTA+ + I G EC EP SN++ R LSG+
Sbjct: 614 TPEDPARWDALRARIMKHGLRNSLMIAIAPTATIASIAGCYECIEPQVSNLFKRETLSGD 673
Query: 653 FVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVD 712
F+ VN++L+ DL +G+W+ ++N+I +GS+Q++ ++PE L+AIY+T WE+ ++L+D
Sbjct: 674 FLQVNRYLVRDLQALGMWNESVRNRIKLAEGSIQELTELPETLRAIYRTAWELPMRSLID 733
Query: 713 MAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
MA DRG +ID SQSLN+ ++ PN GKL+S++F+AW +GLKT YYLRSR A K TV
Sbjct: 734 MAADRGAFIDQSQSLNLFVETPNIGKLSSMYFYAWQKGLKT-TYYLRSRPATRIAKATVS 792
Query: 773 TSVLKENPKVTDDDDAKMA------QMVCSLTNREECMAC 806
S VT A + + CSL N E C AC
Sbjct: 793 GSGATATAPVTPAPVAAASTVTDAEAVACSLENPEACEAC 832
>gi|424666639|ref|ZP_18103665.1| ribonucleoside-diphosphate reductase, alpha subunit
[Stenotrophomonas maltophilia Ab55555]
gi|401070085|gb|EJP78603.1| ribonucleoside-diphosphate reductase, alpha subunit
[Stenotrophomonas maltophilia Ab55555]
Length = 800
Score = 654 bits (1687), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/814 (42%), Positives = 490/814 (60%), Gaps = 48/814 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V KR+G E V +KI +++ S GL DP+ V+ + +G+Y G TT +LDEL+
Sbjct: 26 MSVTKRNGTTELVDLNKIVRAVQRSSEGL--HAVDPMRVATRTISGLYNGATTRELDELS 83
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLI 116
TAA + P+Y LAAR++ + + K +FS+++ G + LI
Sbjct: 84 IRTAALLIGEEPEYGRLAARLLANYIAKEVSGQEIYAFSQSVS---------RGHEVGLI 134
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKV--QGKVVERPQHMLMRV 174
D + + + NA +L+ I D ++DYFG +TL YLL+ KV+E PQ +R+
Sbjct: 135 NDRLLNFVQTNARKLNDAIDISLDLNFDYFGLRTLYDRYLLRHPHTRKVIETPQQFFLRI 194
Query: 175 AVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
A + +D+ + Y M + +SPTLFN+GT QLSSCFL+ DS+E IY
Sbjct: 195 ASAL-SEDVSETLALYKRMGNLDYLPSSPTLFNSGTTHEQLSSCFLLDSPQDSLESIYSK 253
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK +GGIGVS +R+ GS I+ TNG SNGIVP L+ + + V+QGG KRK
Sbjct: 254 YGDIAQLSKFSGGIGVSYTRVRSRGSLIKSTNGHSNGIVPWLKTMDSSVAAVNQGG-KRK 312
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA VYLE WHADI +FL+LR N G E RA +L A WVPDLFM+RV+++ WSLF P
Sbjct: 313 GAACVYLETWHADIEDFLELRDNTGDEARRAHNLNLANWVPDLFMKRVEADQEWSLFDPR 372
Query: 355 EAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKK 414
P D +G FE Y + E +GKA + + A+ L+ ++++ ETG +M FKD CN+
Sbjct: 373 VVPEFTDLFGEAFEAAYLQAEAQGKANRTISARKLYARMMRTLAETGNGWMTFKDKCNRA 432
Query: 415 SNQ--QNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGS 472
SNQ + I SNLCTE+++ TS ETAVCNL SI L G+
Sbjct: 433 SNQTLRPGNVIHLSNLCTEILEVTSNDETAVCNLGSINL-------------------GN 473
Query: 473 RGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
++ FDFEKLAE + L+++ID+N+YP+ETARR+NLR RP+G+G GL D F
Sbjct: 474 HFDEHNEFDFEKLAETVRLAVRQLDRVIDLNFYPIETARRANLRWRPVGLGCMGLQDVFF 533
Query: 533 LLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGV 592
+PFDS EA+ L+K I E IY+HAL TS E+A G + +++ + + G LQ D W V
Sbjct: 534 RKRLPFDSAEARALSKKIAEAIYFHALETSCELAQERGKHPSFNDTRAASGELQFDAWNV 593
Query: 593 NPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
P D W LR I ++G+RNSL++A PTA+ + I G EC EP SN++ R LSG+
Sbjct: 594 VPEDTARWDALRARIKEHGLRNSLMIAIAPTATIASIAGCYECVEPQVSNLFKRETLSGD 653
Query: 653 FVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVD 712
F+ VN++L+++L ++GLW+P +++ I +GS+ + QIPE L+ +Y+T WE+ ++L+D
Sbjct: 654 FLQVNRYLVNELKKLGLWTPEMRDAIKLAEGSIAGVAQIPETLREVYRTAWELPMRSLID 713
Query: 713 MAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
MA +RG +ID S SLN+ M+ PN G ++S++ +AW +G+KT YYLRSR A K TV
Sbjct: 714 MAAERGAFIDQSASLNLFMESPNIGAMSSMYMYAWKQGIKT-TYYLRSRPATKIAKTTVS 772
Query: 773 TSVLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
+ KV D+A + CSL N E C AC
Sbjct: 773 AAA---PAKVFSPDEA----IACSLENPEACEAC 799
>gi|344205622|ref|YP_004790763.1| ribonucleoside-diphosphate reductase subunit alpha
[Stenotrophomonas maltophilia JV3]
gi|343776984|gb|AEM49537.1| ribonucleoside-diphosphate reductase, alpha subunit
[Stenotrophomonas maltophilia JV3]
Length = 800
Score = 654 bits (1686), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/814 (42%), Positives = 491/814 (60%), Gaps = 48/814 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V KR+G E V +KI +++ S GL DP+ V+ + +G+Y G TT +LDEL+
Sbjct: 26 MSVTKRNGTTELVDLNKIVRAVQRSSEGL--HAVDPMRVATRTISGLYNGATTRELDELS 83
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLI 116
TAA + P+Y LAAR++ + + K +FS+++ G + LI
Sbjct: 84 IRTAALLIGEEPEYGRLAARLLANYIAKEVSGQEIYAFSQSVS---------RGHEVGLI 134
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKV--QGKVVERPQHMLMRV 174
D + + + NA +L+ I D ++DYFG +TL YLL+ KV+E PQ +R+
Sbjct: 135 NDRLLNFVQTNARKLNDAIDGALDLNFDYFGLRTLYDRYLLRHPHTRKVIETPQQFFLRI 194
Query: 175 AVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
A + +D+ + Y M + +SPTLFN+GT QLSSCFL+ DS+E IY
Sbjct: 195 ASAL-SEDVSETLALYKRMGNLDYLPSSPTLFNSGTTHEQLSSCFLLDSPQDSLESIYSK 253
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK +GGIGVS +R+ GS I+ TNG SNGIVP L+ + + V+QGG KRK
Sbjct: 254 YGDIAQLSKFSGGIGVSYTRVRSRGSLIKSTNGHSNGIVPWLKTMDSSVAAVNQGG-KRK 312
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA VYLE WHADI +FL+LR N G E RA +L A WVPDLFM+RV+++ WSLF P
Sbjct: 313 GAACVYLETWHADIEDFLELRDNTGDEARRAHNLNLANWVPDLFMKRVEADQEWSLFDPR 372
Query: 355 EAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKK 414
P D +G FE+ Y + E +GKA + + A+ L+ ++++ ETG +M FKD CN+
Sbjct: 373 VVPEFTDLFGEAFEQAYLQAEAQGKANRTISARKLYARMMRTLAETGNGWMTFKDKCNRA 432
Query: 415 SNQ--QNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGS 472
SNQ + I SNLCTE+++ TS ETAVCNL SI L G+
Sbjct: 433 SNQTLRAGNVIHLSNLCTEILEVTSNDETAVCNLGSINL-------------------GN 473
Query: 473 RGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
++ FDFEKLAE + L+++ID+N+YP+ETARR+NLR RP+G+G GL D F
Sbjct: 474 HFDEHNEFDFEKLAETVRLAVRQLDRVIDLNFYPIETARRANLRWRPVGLGCMGLQDVFF 533
Query: 533 LLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGV 592
+PFDS EA+ L+K I E IY+HAL TS E+A G + +++ + + G LQ D W V
Sbjct: 534 RKRLPFDSAEARALSKKIAEAIYFHALETSCELAQERGKHPSFNDTRAAGGELQFDAWNV 593
Query: 593 NPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
P D W LR I ++G+RNSL++A PTA+ + I G EC EP SN++ R LSG+
Sbjct: 594 VPEDTARWDALRARIKEHGLRNSLMIAIAPTATIASIAGCYECVEPQVSNLFKRETLSGD 653
Query: 653 FVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVD 712
F+ VN++L+++L ++GLW+P +++ I +GS+ + QIPE L+ +Y+T WE+ ++L+D
Sbjct: 654 FLQVNRYLVNELKKLGLWTPEMRDAIKLAEGSIAGVAQIPETLREVYRTAWELPMRSLID 713
Query: 713 MAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
MA +RG +ID S SLN+ M+ PN G ++S++ +AW +G+KT YYLRSR A K TV
Sbjct: 714 MAAERGAFIDQSASLNLFMESPNIGAMSSMYMYAWKQGIKT-TYYLRSRPATKIAKTTVS 772
Query: 773 TSVLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
+ KV D+A + CSL N E C AC
Sbjct: 773 AAA---PAKVFSPDEA----IACSLENPEACEAC 799
>gi|190572322|ref|YP_001970167.1| ribonucleoside-diphosphate reductase large subunit
[Stenotrophomonas maltophilia K279a]
gi|190010244|emb|CAQ43852.1| putative ribonucleoside-diphosphate reductase large subunit
[Stenotrophomonas maltophilia K279a]
Length = 775
Score = 653 bits (1685), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/814 (42%), Positives = 490/814 (60%), Gaps = 48/814 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V KR+G E V +KI +++ S GL DP+ V+ + +G+Y G TT +LDEL+
Sbjct: 1 MSVTKRNGTTELVDLNKIVRAVQRSSEGL--HAVDPMRVATRTISGLYNGATTRELDELS 58
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLI 116
TAA + P+Y LAAR++ + + K +FS+++ G + LI
Sbjct: 59 IRTAALLIGEEPEYGRLAARLLANYIAKEVSGQEIYAFSQSVS---------RGHEVGLI 109
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKV--QGKVVERPQHMLMRV 174
D + + + NA +L+ I D ++DYFG +TL YLL+ KV+E PQ +R+
Sbjct: 110 NDRLLNFVQTNARKLNDAIDISLDLNFDYFGLRTLYDRYLLRHPHTRKVIETPQQFFLRI 169
Query: 175 AVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
A + +D+ + Y M + +SPTLFN+GT QLSSCFL+ DS+E IY
Sbjct: 170 ASAL-SEDVSETLALYKRMGNLDYLPSSPTLFNSGTTHEQLSSCFLLDSPQDSLESIYSK 228
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK +GGIGVS +R+ GS I+ TNG SNGIVP L+ + + V+QGG KRK
Sbjct: 229 YGDIAQLSKFSGGIGVSYTRVRSRGSLIKSTNGHSNGIVPWLKTMDSSVAAVNQGG-KRK 287
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA VYLE WHADI +FL+LR N G E RA +L A WVPDLFM+RV+++ WSLF P
Sbjct: 288 GAACVYLETWHADIEDFLELRDNTGDEARRAHNLNLANWVPDLFMKRVEADQEWSLFDPR 347
Query: 355 EAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKK 414
P D +G FE Y + E +GKA + + A+ L+ ++++ ETG +M FKD CN+
Sbjct: 348 VVPEFTDLFGEAFEAAYLQAEAQGKANRTISARKLYARMMRTLAETGNGWMTFKDKCNRA 407
Query: 415 SNQ--QNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGS 472
SNQ + I SNLCTE+++ TS ETAVCNL SI L G+
Sbjct: 408 SNQTLRPGNVIHLSNLCTEILEVTSNDETAVCNLGSINL-------------------GN 448
Query: 473 RGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
++ FDFEKLAE + L+++ID+N+YP+ETARR+NLR RP+G+G GL D F
Sbjct: 449 HFDEHNEFDFEKLAETVRLAVRQLDRVIDLNFYPIETARRANLRWRPVGLGCMGLQDVFF 508
Query: 533 LLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGV 592
+PFDS EA+ L+K I E IY+HAL TS E+A G + +++ + + G LQ D W V
Sbjct: 509 RKRLPFDSAEARALSKKIAEAIYFHALETSCELAQERGKHPSFNDTRAASGELQFDAWNV 568
Query: 593 NPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
P D W LR I ++G+RNSL++A PTA+ + I G EC EP SN++ R LSG+
Sbjct: 569 VPEDTARWDALRSRIKEHGLRNSLMIAIAPTATIASIAGCYECVEPQVSNLFKRETLSGD 628
Query: 653 FVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVD 712
F+ VN++L+++L ++GLW+P +++ I +GS+ + QIPE L+ +Y+T WE+ ++L+D
Sbjct: 629 FLQVNRYLVNELKKLGLWTPEMRDAIKLAEGSIAGVAQIPETLREVYRTAWELPMRSLID 688
Query: 713 MAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
MA +RG +ID S SLN+ M+ PN G ++S++ +AW +G+KT YYLRSR A K TV
Sbjct: 689 MAAERGAFIDQSASLNLFMESPNIGAMSSMYMYAWKQGIKT-TYYLRSRPATKIAKTTVS 747
Query: 773 TSVLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
+ KV D+A + CSL N E C AC
Sbjct: 748 AAA---PAKVFSPDEA----IACSLENPEACEAC 774
>gi|108757444|ref|YP_633212.1| ribonucleoside-diphosphate reductase subunit alpha [Myxococcus
xanthus DK 1622]
gi|108461324|gb|ABF86509.1| ribonucleoside-diphosphate reductase, alpha subunit [Myxococcus
xanthus DK 1622]
Length = 785
Score = 653 bits (1684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/817 (42%), Positives = 495/817 (60%), Gaps = 44/817 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V KR+G E V +KI + + GL D + V+ K +G+Y G TT +LD L+
Sbjct: 1 MRVRKRNGGTETVDLNKIVRAVGRSCVGLP--RVDAMRVATKTISGLYDGATTRELDSLS 58
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLI 116
+TAAA+ P+Y L+AR++ + + K SFS+++ +G K LI
Sbjct: 59 IQTAAALIVEEPEYGRLSARLLATFIQKEVSNQDIHSFSQSVA---------AGHKHGLI 109
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRV 174
AD + + NA +L++ I R+ ++YFG +T+ YLLK +V+E PQ +RV
Sbjct: 110 ADRLLQFVQANARKLNAAIDPSRNDLFEYFGLRTVYDRYLLKNPQTREVLETPQEFFLRV 169
Query: 175 AVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
A + D+++ AI+ Y + S + +SPTLFN+GT QLSSCFL+ D ++ IY
Sbjct: 170 ASALSGDNVNEAIELYRLFSSLEYLPSSPTLFNSGTRHEQLSSCFLLDSPADELDAIYKK 229
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A++SK +GGIGV+ H +RA GS I+ TNG SNGIVP L+ + + V+QGG KRK
Sbjct: 230 YSDIAMLSKFSGGIGVAYHRVRARGSLIKSTNGHSNGIVPWLKTLDASVAAVNQGG-KRK 288
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA VYLE WHADI +FL+LR+N G + R +L A WVPDLFM+RV+++G WSLF P
Sbjct: 289 GACCVYLETWHADIEDFLELRENTGDDARRTHNLNLANWVPDLFMKRVEADGDWSLFDPK 348
Query: 355 EAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKK 414
P D +G FE+ Y K E +G A + V+A++L+ ++KS +TG +M FKD N+K
Sbjct: 349 SVPHFTDLYGDAFEQAYAKAEADGLAMRKVKARDLYARMMKSLAQTGNGWMTFKDISNRK 408
Query: 415 SNQQNLG--TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGS 472
SNQ I SNLCTE+++ TS ETAVCNL S+ L R LV
Sbjct: 409 SNQTGKAGNVIHLSNLCTEILEVTSQGETAVCNLGSLNLSRM--------------LVDG 454
Query: 473 RGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
+ FDFE+L + L+++ID+NYYP+ TA SN R RP+G+G+ GL D F
Sbjct: 455 K------FDFERLRANAQLAMRQLDRVIDLNYYPIPTAASSNKRWRPVGLGLMGLQDVFF 508
Query: 533 LLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGV 592
L + FDS EA+ L+K I E IY+ AL TS E+A + G +E++ + +KG LQ D WGV
Sbjct: 509 QLKLAFDSAEARALSKKISEEIYFAALTTSCELAEQYGAHESFAETRAAKGELQFDHWGV 568
Query: 593 NPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
P D W LR I K+G+RNSL++A PTA+ + I+G EC EP SN++ R LSG+
Sbjct: 569 VPEDTARWDALRQRIMKHGLRNSLMIAIAPTATIASIVGCYECIEPQVSNLFKRETLSGD 628
Query: 653 FVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVD 712
F+ VN++L+ DL +GLW+ I+N+I +GSVQ I ++PE L+A+Y+T WE+ ++L+D
Sbjct: 629 FLQVNRYLVRDLQALGLWNENIRNRIKMAEGSVQDITELPENLRAVYRTAWELPMRSLLD 688
Query: 713 MAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
M DRG +ID SQSLN+ ++ PN GKL+S++F+AW +GLKT YYLRSR A K TV
Sbjct: 689 MGADRGAFIDQSQSLNLFVETPNIGKLSSMYFYAWQKGLKT-TYYLRSRPATRIAKATVG 747
Query: 773 T---SVLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
+ + + + + CSL N E C AC
Sbjct: 748 AGGGASVAQAAPAPVAKATEAEAVACSLENPEACEAC 784
>gi|383454420|ref|YP_005368409.1| ribonucleoside-diphosphate reductase subunit alpha [Corallococcus
coralloides DSM 2259]
gi|380733635|gb|AFE09637.1| ribonucleoside-diphosphate reductase subunit alpha [Corallococcus
coralloides DSM 2259]
Length = 823
Score = 653 bits (1684), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 353/820 (43%), Positives = 496/820 (60%), Gaps = 50/820 (6%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V KR+G E V +KI + K GLS D + V+ K +G+Y G TT +LD L+
Sbjct: 39 MRVKKRNGTAEPVDLNKIVRAVGKSCVGLS--RVDVMRVATKTISGLYDGATTRELDSLS 96
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTK----KSFSETIKDMYNHYNERSGLKAPLI 116
+TAAA+ P+YA L+AR++ + + K +SFS+++ +G K LI
Sbjct: 97 IQTAAALIVEEPEYARLSARLLSTFIQKEVSNQDIQSFSQSVA---------AGHKHGLI 147
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRV 174
AD + + NA +L++ I R+ ++YFG +T+ YLLK +V+E PQ +RV
Sbjct: 148 ADRLLTFVQANARKLNAAIDPVRNDLFEYFGLRTVYDRYLLKNPQTREVIETPQDFFLRV 207
Query: 175 AVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
A + D+ AI+ Y + S + +SPTLFN+GT QLSSCFL+ D ++ IY
Sbjct: 208 ACALSGDNAREAIELYRLFSSLEYLPSSPTLFNSGTRHEQLSSCFLLDSPADELDAIYKK 267
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A++SK +GGIGV H +RA GS I+ TNG SNGIVP L+ + + V+QGG KRK
Sbjct: 268 YSDIAMLSKFSGGIGVGYHRVRARGSLIKSTNGHSNGIVPWLKTLDASVAAVNQGG-KRK 326
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA VYLE WHADI +FL+LR N G E RA +L A WVPDLFM RV+++ WSLF P
Sbjct: 327 GACCVYLETWHADIEDFLELRDNTGDEARRAHNLNLANWVPDLFMRRVEADQEWSLFDPK 386
Query: 355 EAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKK 414
P L D +G F++ Y E +G+A + V+A++L+ ++K +TG +M FKD N+K
Sbjct: 387 TTPHLTDLFGDAFDKAYVAAEAQGQAVRKVKARDLYARMMKVLAQTGNGWMTFKDISNRK 446
Query: 415 SNQ--QNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGS 472
SNQ Q I SNLCTE+++ TS ETAVCNL S+ L R V
Sbjct: 447 SNQTGQPGNVIHLSNLCTEILEVTSQGETAVCNLGSLNLGRMV----------------- 489
Query: 473 RGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
K+ FDF+ L + + L+++ID+NYYP+ TA SN R RP+G+G+ GL D F
Sbjct: 490 ---KDGKFDFDLLRSNAMLALKQLDRVIDLNYYPIPTAADSNRRWRPVGLGLMGLQDVFF 546
Query: 533 LLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGV 592
L +PFDS EA+ L+K I E IYY AL TSS++A + G + ++ + +KG LQ D WG+
Sbjct: 547 QLRLPFDSVEARNLSKKISEEIYYAALVTSSDLAEQFGAHPSFPETRAAKGELQFDSWGI 606
Query: 593 NPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
P D W LR I K G+RNSL++A PTA+ + I G EC EP SN++ R LSG+
Sbjct: 607 VPEDTLRWDALRSRIMKVGLRNSLMIAIAPTATIASIAGCYECIEPQVSNLFKRETLSGD 666
Query: 653 FVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVD 712
F+ VN++L+ DL ++GLW+ +N+I +GSVQ + ++PEEL+AIY+T WEI ++L+D
Sbjct: 667 FLQVNRYLVRDLQQLGLWNENTRNRIKLAEGSVQDLTELPEELRAIYRTAWEIPMRSLLD 726
Query: 713 MAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
M DRG +ID SQSLN+ ++ PN GKL+S++F+AW +GLKT YYLRSR A K TV
Sbjct: 727 MGADRGAFIDQSQSLNLFVETPNIGKLSSMYFYAWQKGLKT-TYYLRSRPATRIAKATVG 785
Query: 773 ------TSVLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
T+ P+ A+ + CSL N E C AC
Sbjct: 786 QGGPTITAAPTPAPQTV---TAEAEAVACSLENPEACEAC 822
>gi|408825289|ref|ZP_11210179.1| ribonucleoside-diphosphate reductase subunit alpha [Pseudomonas
geniculata N1]
Length = 800
Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/814 (41%), Positives = 491/814 (60%), Gaps = 48/814 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V KR+G E V +KI +++ S GL DP+ V+ + +G+Y G TT +LDEL+
Sbjct: 26 MSVTKRNGTTELVDLNKIVRAVQRSSEGL--HAVDPMRVATRTISGLYNGATTRELDELS 83
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLI 116
TAA + P+Y LAAR++ + + K +FS+++ G + LI
Sbjct: 84 IRTAALLIGEEPEYGRLAARLLANYIAKEVSGQEIYAFSQSVS---------RGHEVGLI 134
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKV--QGKVVERPQHMLMRV 174
D + + + NA +L+ I D ++DYFG +TL YLL+ KV+E PQ +R+
Sbjct: 135 NDRLLNFVQTNARKLNDAIDISLDLNFDYFGLRTLYDRYLLRHPHTRKVIETPQQFFLRI 194
Query: 175 AVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
A + +D+ + Y M + +SPTLFN+GT QLSSCFL+ DS+E IY
Sbjct: 195 ASAL-SEDVSETLALYKRMGNLDYLPSSPTLFNSGTTHEQLSSCFLLDSPQDSLESIYSK 253
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK +GGIGVS +R+ GS I+ TNG SNGIVP L+ + + V+QGG KRK
Sbjct: 254 YGDIAQLSKFSGGIGVSYTRVRSRGSLIKSTNGHSNGIVPWLKTMDSSVAAVNQGG-KRK 312
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA VYLE WHADI +FL+LR N G E RA +L A WVPDLFM+RV+++ WSLF P
Sbjct: 313 GAACVYLETWHADIEDFLELRDNTGDEARRAHNLNLANWVPDLFMKRVEADQEWSLFDPR 372
Query: 355 EAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKK 414
P D +G FE Y + E +GKA + + A+ L+ ++++ ETG +M FKD CN+
Sbjct: 373 VVPEFTDLFGEAFEAAYLQAEAQGKANRTISARKLYARMMRTLAETGNGWMTFKDKCNRA 432
Query: 415 SNQ--QNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGS 472
SNQ + I SNLCTE+++ TS ETAVCNL SI L G+
Sbjct: 433 SNQTLRPGNVIHLSNLCTEILEVTSNDETAVCNLGSINL-------------------GN 473
Query: 473 RGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
++ FDFEKLAE + L+++ID+N+YP+ETARR+NLR RP+G+G GL D F
Sbjct: 474 HFDEHNEFDFEKLAETVRLAVRQLDRVIDLNFYPIETARRANLRWRPVGLGCMGLQDVFF 533
Query: 533 LLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGV 592
+PFDS EA+ L+K I E IY+HAL TS E+A G + +++ + + G LQ D W V
Sbjct: 534 RKRLPFDSAEARALSKKIAEAIYFHALETSCELAQERGKHPSFNDTRAASGELQFDAWNV 593
Query: 593 NPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
P D W LR+ I ++G+RNSL++A PTA+ + I G EC EP SN++ R LSG+
Sbjct: 594 VPEDTARWDALRERIKEHGLRNSLMIAIAPTATIASIAGCYECVEPQVSNLFKRETLSGD 653
Query: 653 FVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVD 712
F+ VN++L+++L ++GLW+ +++ I +GS+ + QIPE L+ +Y+T WE+ ++L+D
Sbjct: 654 FLQVNRYLVNELKKLGLWTADMRDAIKLAEGSIAGVAQIPETLREVYRTAWELPMRSLID 713
Query: 713 MAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
MA +RG +ID S SLN+ M+ PN G ++S++ +AW +G+KT YYLRSR A K TV
Sbjct: 714 MAAERGAFIDQSASLNLFMESPNIGAMSSMYMYAWKQGIKT-TYYLRSRPATKIAKTTVS 772
Query: 773 TSVLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
++ KV D+A + CSL N E C AC
Sbjct: 773 SAA---PAKVFSPDEA----IACSLENPEACEAC 799
>gi|254521985|ref|ZP_05134040.1| ribonucleoside-diphosphate reductase, alpha subunit
[Stenotrophomonas sp. SKA14]
gi|219719576|gb|EED38101.1| ribonucleoside-diphosphate reductase, alpha subunit
[Stenotrophomonas sp. SKA14]
Length = 800
Score = 652 bits (1683), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/814 (41%), Positives = 491/814 (60%), Gaps = 48/814 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V KR+G E V +KI +++ S GL DP+ V+ + +G+Y G TT +LDEL+
Sbjct: 26 MSVTKRNGTTELVDLNKIVRAVQRSSEGL--HAVDPMRVATRTISGLYNGATTRELDELS 83
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLI 116
TAA + P+Y LAAR++ + + K +FS+++ G + LI
Sbjct: 84 IRTAALLIGEEPEYGRLAARLLANYIAKEVSGQEIYAFSQSVS---------RGHEVGLI 134
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKV--QGKVVERPQHMLMRV 174
D + + + NA +L+ I D ++DYFG +TL YLL+ KV+E PQ +R+
Sbjct: 135 NDRLLNFVQTNARKLNDAIDGALDLNFDYFGLRTLYDRYLLRHPHTRKVIETPQQFFLRI 194
Query: 175 AVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
A + +D+ + Y M + +SPTLFN+GT QLSSCFL+ DS+E IY
Sbjct: 195 ASAL-SEDVSETLALYKRMGNLDYLPSSPTLFNSGTTHEQLSSCFLLDSPQDSLESIYSK 253
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK +GGIGVS +R+ GS I+ TNG SNGIVP L+ + + V+QGG KRK
Sbjct: 254 YGDIAQLSKFSGGIGVSYTRVRSRGSLIKSTNGHSNGIVPWLKTMDSSVAAVNQGG-KRK 312
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA VYLE WHAD+ +FL+LR N G E RA +L A WVPDLFM+RV+++ WSLF P
Sbjct: 313 GAACVYLETWHADVEDFLELRDNTGDEARRAHNLNLANWVPDLFMKRVEADQEWSLFDPR 372
Query: 355 EAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKK 414
P D +G FE Y + E +GKA + + A+ L+ ++++ ETG +M FKD CN+
Sbjct: 373 VVPEFTDLFGEAFEAAYLQAEAQGKANRTISARKLYARMMRTLAETGNGWMTFKDKCNRA 432
Query: 415 SNQ--QNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGS 472
SNQ + I SNLCTE+++ TS ETAVCNL SI L G+
Sbjct: 433 SNQTLRPGNVIHLSNLCTEILEVTSNDETAVCNLGSINL-------------------GN 473
Query: 473 RGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
++ FDFEKLAE + L+++ID+N+YP+ETARR+NLR RP+G+G GL D F
Sbjct: 474 HFDEHNEFDFEKLAETVRLAVRQLDRVIDLNFYPIETARRANLRWRPVGLGCMGLQDVFF 533
Query: 533 LLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGV 592
+PFDS EA+ L+K I E IY+HAL TS E+A G + +++ + + G LQ D W V
Sbjct: 534 RKRLPFDSAEARALSKKIAEAIYFHALETSCELAQERGKHPSFNDTRAASGELQFDAWNV 593
Query: 593 NPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
P D W LR+ I ++G+RNSL++A PTA+ + I G EC EP SN++ R LSG+
Sbjct: 594 VPEDTARWDALRERIKEHGLRNSLMIAIAPTATIASIAGCYECVEPQVSNLFKRETLSGD 653
Query: 653 FVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVD 712
F+ VN++L+++L ++GLW+ +++ I +GS+ + QIPE L+ +Y+T WE+ ++L+D
Sbjct: 654 FLQVNRYLVNELKKLGLWTADMRDAIKLAEGSIAGVAQIPETLREVYRTAWELPMRSLID 713
Query: 713 MAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
MA +RG +ID S SLN+ M+ PN G ++S++ +AW +G+KT YYLRSR A K TV
Sbjct: 714 MAAERGAFIDQSASLNLFMESPNIGAMSSMYMYAWKQGIKT-TYYLRSRPATKIAKTTVS 772
Query: 773 TSVLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
T+ KV D+A + CSL N E C AC
Sbjct: 773 TAA---PAKVFSPDEA----IACSLENPEACEAC 799
>gi|405354038|ref|ZP_11023447.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Chondromyces apiculatus DSM 436]
gi|397092729|gb|EJJ23478.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Myxococcus sp. (contaminant ex DSM 436)]
Length = 837
Score = 652 bits (1681), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/817 (42%), Positives = 498/817 (60%), Gaps = 44/817 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V KR+G E V +KI + + GL D + V+ K +G+Y G TT +LD L+
Sbjct: 53 MRVRKRNGGAETVDLNKIVRAVGRSCAGLP--RVDAMRVATKTISGLYDGATTRELDSLS 110
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLI 116
+TAAA+ P+Y L+AR++ + + K SFS++I +G K LI
Sbjct: 111 IQTAAALIVEEPEYGRLSARLLATFIQKEVSNQDIHSFSQSIA---------AGHKHGLI 161
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRV 174
AD + + NA +L++ I R+ ++YFG +T+ YLLK +V+E PQ +RV
Sbjct: 162 ADRLLQFVQANARKLNAAIDPTRNDLFEYFGLRTVYDRYLLKNPQTREVLETPQEFFLRV 221
Query: 175 AVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
A + D+++ AI+ Y + S + +SPTLFN+GT QLSSCFL+ D ++ IY
Sbjct: 222 ASALSGDNVNEAIELYRLFSSLEYLPSSPTLFNSGTRHEQLSSCFLLDSPADELDAIYKK 281
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A++SK +GGIGV+ H +RA GS I+ TNG SNGIVP L+ + + V+QGG KRK
Sbjct: 282 YSDIAMLSKFSGGIGVAYHRVRARGSLIKSTNGHSNGIVPWLKTLDASVAAVNQGG-KRK 340
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA VYLE WHADI +FL+LR+N G + R +L A WVPDLFM+RV+++G WSLF P
Sbjct: 341 GACCVYLETWHADIEDFLELRENTGDDARRTHNLNLANWVPDLFMKRVEADGDWSLFDPK 400
Query: 355 EAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKK 414
P D +G FE+ Y K E +G A + V+A++L+ ++KS +TG +M FKD N+K
Sbjct: 401 TVPHFTDLYGDAFEQAYAKAEADGLAMRKVKARDLYARMMKSLAQTGNGWMTFKDISNRK 460
Query: 415 SNQ--QNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGS 472
SNQ ++ I SNLCTE+++ TS ETAVCNL S+ L R V
Sbjct: 461 SNQTGKDGNVIHLSNLCTEILEVTSQGETAVCNLGSLNLGRMV----------------- 503
Query: 473 RGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
K+ FDFE+L + L+++ID+NYYP+ TA SN R RP+G+G+ GL D F
Sbjct: 504 ---KDGKFDFERLRANAQLAMRQLDRVIDLNYYPIPTAASSNQRWRPVGLGLMGLQDVFF 560
Query: 533 LLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGV 592
L + FD+ EA++L+K I E IY+ AL TS E+A + G + ++ + +KG LQ D WGV
Sbjct: 561 QLKLAFDAPEARELSKQISEEIYFAALTTSCEMAEQYGAHTSFPETRAAKGELQFDHWGV 620
Query: 593 NPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
P+D W LR I K+G+RNSL++A PTA+ + I+G EC EP SN++ R LSG+
Sbjct: 621 VPTDMARWDALRQRIMKHGLRNSLMIAIAPTATIASIVGCYECIEPQVSNLFKRETLSGD 680
Query: 653 FVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVD 712
F+ VN++L+ DL +GLW+ ++N+I +GSVQ I ++PE L+A+Y+T WE+ ++L+D
Sbjct: 681 FLQVNRYLVRDLQALGLWNENVRNRIKMAEGSVQDITELPENLRAVYRTAWELPMRSLLD 740
Query: 713 MAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
M DRG +ID SQSLN+ ++ PN GKL+S++F+AW +GLKT YYLRSR A K TV
Sbjct: 741 MGADRGAFIDQSQSLNLFVETPNIGKLSSMYFYAWQKGLKT-TYYLRSRPATRIAKATVG 799
Query: 773 T---SVLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
+ + + + + CSL N E C AC
Sbjct: 800 AGGGASVAQAAPAPVAKATEAEAVACSLENPEACEAC 836
>gi|194363984|ref|YP_002026594.1| ribonucleoside-diphosphate reductase subunit alpha
[Stenotrophomonas maltophilia R551-3]
gi|194346788|gb|ACF49911.1| ribonucleoside-diphosphate reductase, alpha subunit
[Stenotrophomonas maltophilia R551-3]
Length = 803
Score = 652 bits (1681), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/814 (41%), Positives = 489/814 (60%), Gaps = 45/814 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V KR+G E V +KI +++ S GL DP+ V+ + +G+Y G TT +LDEL+
Sbjct: 26 MSVTKRNGTTELVDLNKIVRAVQRSSEGL--HAVDPMRVATRTISGLYNGATTRELDELS 83
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLI 116
TAA + P+Y LAAR++ + + K +FS+++ G + LI
Sbjct: 84 IRTAALLIGEEPEYGRLAARLLANYIAKEVSGQEIYAFSQSVG---------RGHEVGLI 134
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKV--QGKVVERPQHMLMRV 174
D + + + NA +L+ I D ++DYFG +TL YLL+ KV+E PQ +R+
Sbjct: 135 NDRLLNFVQTNARKLNDAIDMSLDLNFDYFGLRTLYDRYLLRHPHTRKVIETPQQFFLRI 194
Query: 175 AVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
A + +D+ A+ Y M + +SPTLFN+GT QLSSCFL+ DS+E IY
Sbjct: 195 ASAL-SEDVPEALALYKRMGNLDYLPSSPTLFNSGTTHEQLSSCFLLDSPQDSLESIYSK 253
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK +GGIGVS +R+ GS I+ TNG SNGIVP L+ + + V+QGG KRK
Sbjct: 254 YGDIAQLSKFSGGIGVSYTRVRSRGSLIKSTNGHSNGIVPWLKTMDSSVAAVNQGG-KRK 312
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA VYLE WHAD+ +FL+LR N G E RA +L A W+PDLFM+RV+++ WSLF P
Sbjct: 313 GAACVYLETWHADVEDFLELRDNTGDESRRAHNLNLANWIPDLFMKRVEADQEWSLFDPR 372
Query: 355 EAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKK 414
P D +G FE Y + E +GKA + + A+ L+ ++++ ETG +M FKD CN+
Sbjct: 373 VVPEFTDLFGEAFEAAYLQAEAQGKANRTISARKLYSRMMRTLAETGNGWMTFKDKCNRA 432
Query: 415 SNQ--QNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGS 472
SNQ + I SNLCTE+++ TS ETAVCNL SI L G+
Sbjct: 433 SNQTLRAGNVIHLSNLCTEILEVTSAEETAVCNLGSINL-------------------GN 473
Query: 473 RGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
N FDF+KLA+ + L+++ID+N+YP+E+ARR NLR RP+G+G GL D F
Sbjct: 474 HFDGNGEFDFDKLADTVRLAVRQLDRVIDLNFYPIESARRGNLRWRPVGLGCMGLQDVFF 533
Query: 533 LLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGV 592
+PFD EA+ L+K I ETIY+HAL TS E+A G + ++ + + G LQ D W V
Sbjct: 534 RKRLPFDGAEARALSKKIAETIYFHALETSVELAQERGKHPSFADTRAASGELQFDAWNV 593
Query: 593 NPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
P D W LR+ I ++G+RNSL++A PTA+ + I G EC EP SN++ R LSG+
Sbjct: 594 VPEDAERWDSLRERIKEHGLRNSLMIAIAPTATIASIAGCYECVEPQVSNLFKRETLSGD 653
Query: 653 FVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVD 712
F+ VN++L+++L ++G W+P +++ I +GS+Q I QIPE L+ +Y+T WE+ ++L+D
Sbjct: 654 FLQVNRYLVNELKKLGHWTPEMRDAIKLAEGSIQGITQIPETLRHVYRTAWELPMRSLID 713
Query: 713 MAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
MA DRG +ID S SLN+ M+ PN G ++S++ +AW +G+KT YYLRSR A K TV
Sbjct: 714 MAADRGAFIDQSASLNLFMESPNIGAMSSMYMYAWKQGIKT-TYYLRSRPATKIAKTTVS 772
Query: 773 TSVLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
+ KV ++A + CSL N E C AC
Sbjct: 773 HAAGAAPEKVFSPEEA----IACSLENPEACEAC 802
>gi|386716673|ref|YP_006182999.1| ribonucleotide reductase subunit alpha [Stenotrophomonas
maltophilia D457]
gi|384076235|emb|CCH10816.1| Ribonucleotide reductase of class Ia (aerobic),alpha subunit
[Stenotrophomonas maltophilia D457]
Length = 800
Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/814 (41%), Positives = 490/814 (60%), Gaps = 48/814 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V KR+G E V +KI +++ S GL DP+ V+ + +G+Y G TT +LDEL+
Sbjct: 26 MSVTKRNGTTELVDLNKIVRAVQRSSEGL--HAVDPMRVATRTISGLYNGATTRELDELS 83
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLI 116
TAA + P+Y LAAR++ + + K +FS+++ G + LI
Sbjct: 84 IRTAALLIGEEPEYGRLAARLLANYIAKEVSGQEIYAFSQSVS---------RGHEVGLI 134
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKV--QGKVVERPQHMLMRV 174
D + + + NA +L+ I D ++DYFG +TL YLL+ KV+E PQ +R+
Sbjct: 135 NDRLLNFVQTNARKLNDAIDISLDLNFDYFGLRTLYDRYLLRHPHTRKVIETPQQFFLRI 194
Query: 175 AVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
A + +D+ + Y M + +SPTLFN+GT QLSSCFL+ DS+E IY
Sbjct: 195 ASAL-SEDVSETLALYKRMGNLDYLPSSPTLFNSGTTHEQLSSCFLLDSPQDSLESIYSK 253
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK +GGIGVS +R+ GS I+ TNG SNGIVP L+ + + V+QGG KRK
Sbjct: 254 YGDIAQLSKFSGGIGVSYTRVRSRGSLIKSTNGHSNGIVPWLKTMDSSVAAVNQGG-KRK 312
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA VYLE WHADI +FL+LR N G E RA +L A WVPDLFM+RV+++ WSLF P
Sbjct: 313 GAACVYLETWHADIEDFLELRDNTGDEARRAHNLNLANWVPDLFMKRVEADQEWSLFDPR 372
Query: 355 EAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKK 414
P D +G FE+ Y + E +GKA + + A+ L+ ++++ ETG +M FKD CN+
Sbjct: 373 VVPEFTDLFGEAFEQAYLQAEAQGKANRTISARKLYARMMRTLAETGNGWMTFKDKCNRA 432
Query: 415 SNQ--QNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGS 472
SNQ + I SNLCTE+++ TS ETAVCNL SI L G+
Sbjct: 433 SNQTLRPGNVIHLSNLCTEILEVTSNDETAVCNLGSINL-------------------GN 473
Query: 473 RGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
++ FDFEKLAE + L+++ID+N+YP+ETARR+NLR RP+G+G GL D F
Sbjct: 474 HFDEHNEFDFEKLAETVRLAVRQLDRVIDLNFYPIETARRANLRWRPVGLGCMGLQDVFF 533
Query: 533 LLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGV 592
+PFDS EA+ L+K I E IY+HAL TS E+A G + +++ + + G LQ D W V
Sbjct: 534 RKRLPFDSAEARALSKKIAEAIYFHALETSCELAQERGKHPSFNDTRAAGGELQFDAWNV 593
Query: 593 NPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
P D W LR I ++G+RNSL++A PTA+ + I G EC EP SN++ R LSG+
Sbjct: 594 VPEDTARWDALRARIKEHGLRNSLMIAIAPTATIASIAGCYECVEPQVSNLFKRETLSGD 653
Query: 653 FVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVD 712
F+ VN++L+++L ++GLW+ +++ I +GS+ + QIPE L+ +Y+T WE+ ++L+D
Sbjct: 654 FLQVNRYLVNELKKLGLWTADMRDAIKLAEGSIAGVAQIPETLREVYRTAWELPMRSLID 713
Query: 713 MAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
MA +RG +ID S SLN+ M+ PN G ++S++ +AW +G+KT YYLRSR A K TV
Sbjct: 714 MAAERGAFIDQSASLNLFMESPNIGAMSSMYMYAWKQGIKT-TYYLRSRPATKIAKTTVS 772
Query: 773 TSVLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
+ KV D+A + CSL N E C AC
Sbjct: 773 AAA---PAKVFSPDEA----IACSLENPEACEAC 799
>gi|389730177|ref|ZP_10189352.1| ribonucleoside-diphosphate reductase subunit alpha [Rhodanobacter
sp. 115]
gi|388440949|gb|EIL97269.1| ribonucleoside-diphosphate reductase subunit alpha [Rhodanobacter
sp. 115]
Length = 856
Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/815 (42%), Positives = 481/815 (59%), Gaps = 42/815 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V KR+G QE V +KI + + + GL DP+ V+ K G+Y G TT +LD+L+
Sbjct: 74 MRVTKRNGGQETVDVNKIVRAVTRSADGL--HAVDPMRVALKTIGGLYDGATTQELDQLS 131
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTK----KSFSETIKDMYNHYNERSGLKAPLI 116
TAAA+T P+Y LAAR++ + + K +SFS+++ G + ++
Sbjct: 132 IRTAAALTAEEPEYGQLAARLLGAYIDKEVTGQEIQSFSQSVA---------HGAELGIL 182
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGK--VVERPQHMLMRV 174
+ + D + NA +L+ I ++YFG +T+ YLL+ K V E PQ+ MR+
Sbjct: 183 NERLRDFVATNARKLNDAIDPLATRRFEYFGLRTVYDRYLLRHPQKRFVTETPQYFFMRI 242
Query: 175 AVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
A + +DI ++ Y M+S + +SPTLFNAGT QLSSCFL+ DS+E IYD
Sbjct: 243 ACALGGNDIAETLELYRMLSSLEYIASSPTLFNAGTAHEQLSSCFLLDSPTDSLESIYDK 302
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK AGGIG++ +R+ GS I+GTNG SNG+VP L+ + + V+QGG KRK
Sbjct: 303 YADVAKLSKFAGGIGLAYSRVRSRGSLIKGTNGHSNGLVPWLKTLDASVAAVNQGG-KRK 361
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA VYLE WHADI EFL+LR N G E RA +L A W+PD FM RV+++G WSLF P
Sbjct: 362 GAACVYLETWHADIEEFLELRDNTGDEARRAHNLNLANWIPDEFMRRVETDGDWSLFDPK 421
Query: 355 EAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKK 414
P D WG FE Y K E EG A K V+A++L+ +L++ +TG +M FKD CN
Sbjct: 422 VVPHFVDSWGETFETAYRKAEAEGLAAKTVKARDLYARMLRTLAQTGNGWMTFKDRCNAT 481
Query: 415 SNQQNLG--TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGS 472
SNQ I SNLCTE+++ T+ ETAVCNL SI L R+V + V
Sbjct: 482 SNQTAKADNVIHLSNLCTEILEVTNAGETAVCNLGSINLSRHVIDGAV------------ 529
Query: 473 RGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
D++KLA LN++ID+N+YP++TA +N + RP+G+GV GL D F
Sbjct: 530 --------DYDKLATTVRTAVRQLNRVIDLNFYPIDTAATANRKWRPVGLGVMGLQDVFF 581
Query: 533 LLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMW-G 591
L +PFDS EA L+ I E IY+HAL S+E+A EG + + S + G LQ D W
Sbjct: 582 KLRLPFDSAEALALSSRIAEEIYFHALSQSNELAEAEGAHPGFAESRAASGDLQFDHWPN 641
Query: 592 VNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSG 651
P D W LR+ I G+RNSLL+A PTA+ + I G EC EP SN++ R LSG
Sbjct: 642 AKPHDDARWNALRENIKAKGLRNSLLIAIAPTATIASIAGCYECIEPQVSNLFKRETLSG 701
Query: 652 EFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLV 711
+F+VVN++L+ +L +GLW+ +++ I +GS+Q I IPE L+ IY+TVWE+ QK L+
Sbjct: 702 DFLVVNRYLVDELKTLGLWTSEVRDAIKLAEGSIQGITAIPERLRQIYRTVWELPQKALI 761
Query: 712 DMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTV 771
++ RG YID SQSLN+ M+ PN G+L+S++ +AW G+KT YYLRSR A K TV
Sbjct: 762 ELGAARGAYIDQSQSLNLFMENPNIGQLSSMYMYAWKAGIKT-TYYLRSRPATKIAKTTV 820
Query: 772 DTSVLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
+ D D A + CSL N E C AC
Sbjct: 821 SAGKAEAKAAPAIDQDQASAAVFCSLENPEYCEAC 855
>gi|390957922|ref|YP_006421679.1| ribonucleoside-diphosphate reductase subunit alpha [Terriglobus
roseus DSM 18391]
gi|390958264|ref|YP_006422021.1| ribonucleoside-diphosphate reductase subunit alpha [Terriglobus
roseus DSM 18391]
gi|390412840|gb|AFL88344.1| ribonucleoside-diphosphate reductase, alpha subunit [Terriglobus
roseus DSM 18391]
gi|390413182|gb|AFL88686.1| ribonucleoside-diphosphate reductase, alpha subunit [Terriglobus
roseus DSM 18391]
Length = 825
Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/828 (41%), Positives = 512/828 (61%), Gaps = 51/828 (6%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KR+G E V +KI +++ YGL +H D + ++ K G+Y G TT +LD ++
Sbjct: 26 MHVKKRNGALEPVDVNKIVRAVQRSGYGL--QHVDAIRIASKTIGGLYDGATTRELDAIS 83
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTK----KSFSETIKDMYNHYNERSGLKAPLI 116
+TAA++ P Y+ LA+R++++ + K SFS++++ Y + G+ +P +
Sbjct: 84 IDTAASLIAEEPQYSKLASRLLLATILKEVAGQNLHSFSQSVE-----YGAQVGIVSPAV 138
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRV 174
A+ V I M+ +L+ I D D ++YFG +T+ YLL+ + KV+E PQH +RV
Sbjct: 139 AEFV-RIHMR---KLNQAIKEDNDDRFEYFGLRTVYDRYLLRDPLSRKVIETPQHFFLRV 194
Query: 175 AVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
A G+ AI+ Y+++S + +SPTLFN+GT Q+SSC+L DS+E IYD+
Sbjct: 195 ACGLAGTP-HEAIEFYNLISSHDYMPSSPTLFNSGTKHPQMSSCYLHDSPQDSLESIYDS 253
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
K+ A++SK +GGIG++ H +R+ GS IR TNG SNGIVP LR + + V+QGG KRK
Sbjct: 254 YKDVALLSKFSGGIGLAFHRVRSEGSLIRATNGLSNGIVPWLRTLDSSVAAVNQGG-KRK 312
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA VYLEPWHADI FL+LR+N G R +L A W+PDLFM+RV +G+WSLF P
Sbjct: 313 GACCVYLEPWHADIESFLELRENTGDLSRRTYNLNLANWIPDLFMKRVDEDGMWSLFDPK 372
Query: 355 EAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKK 414
P L D +G EFE+ Y + E++ + ++A++L+ +++S ETG +M FKD CN K
Sbjct: 373 LVPQLPDLFGEEFEKAYIQAEEDKIYYRQMKARDLYARMMRSLAETGNGWMTFKDACNVK 432
Query: 415 SNQQNL--GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGS 472
+NQ L I SNLCTE+ + TS ETAVCNL S+ L R+++ +
Sbjct: 433 NNQTGLPGNVIHLSNLCTEITEVTSKDETAVCNLGSVNLGRHMK---------------T 477
Query: 473 RGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
+ FDFEKLA + L+++ID+N+YPV+ A ++N R RP+G+GV GL D F
Sbjct: 478 DENGKTVFDFEKLANTVRVAVPMLDRVIDINFYPVQQALKANNRWRPVGLGVMGLQDVFF 537
Query: 533 LLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGV 592
+ +PFDS EAQ L+ I E IYY+A+ ++E+A + GP+ +++ + +++G Q D+W +
Sbjct: 538 QMRLPFDSPEAQALSTKIQEEIYYYAMLATTELAEKNGPHPSFNETRLAQGNFQFDLWKI 597
Query: 593 NPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
PS+ W LR I ++GVRNSLL+A PTA+ + I+G EC EP SN++ R LSGE
Sbjct: 598 TPSEPERWEALRQRIKQSGVRNSLLIAIAPTATIASIVGCYECIEPQISNLFKRETLSGE 657
Query: 653 FVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVD 712
F+ VN++L+++L +G+W+ ++ K+ +GSVQ I + +ELK IY+TVWE+ ++L+D
Sbjct: 658 FLQVNRYLINELKALGMWNEEMRMKLKMSEGSVQNIDDLTDELKLIYRTVWEVPMRSLID 717
Query: 713 MAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
MA R YID +QSLN+ + PN G+L+S++ +AW +GLKT YYLRSR A K TV
Sbjct: 718 MAAARNAYIDQAQSLNLFSESPNIGRLSSMYMYAWKQGLKT-TYYLRSRPATKIAKTTVQ 776
Query: 773 TSVLK-----------ENPKVTDDDDAKM---AQMVCSLTNREECMAC 806
+ +N V + + + A + CSL N E C AC
Sbjct: 777 KGAMSSSLPQTAQAQLQNVSVPEPEQQPIDASAAIACSLENPESCEAC 824
>gi|389799152|ref|ZP_10202155.1| ribonucleoside-diphosphate reductase subunit alpha [Rhodanobacter
sp. 116-2]
gi|388443611|gb|EIL99753.1| ribonucleoside-diphosphate reductase subunit alpha [Rhodanobacter
sp. 116-2]
Length = 806
Score = 651 bits (1679), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/815 (42%), Positives = 490/815 (60%), Gaps = 51/815 (6%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V KR+G QEAV +KI + + + GL DP+ V+ K G+Y G TT++LD+L+
Sbjct: 33 MRVTKRNGGQEAVDVNKIVRAVTRSAEGL--HGVDPLRVTLKTIGGLYDGATTAELDQLS 90
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTK----KSFSETIKDMYNHYNERSGLKAPLI 116
AAA+T P+Y LAAR++ + + K +S+S++I G + L+
Sbjct: 91 IRIAAALTAEEPEYGQLAARLLGAYIDKEVSGQEIQSYSQSIA---------RGTELGLL 141
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGK--VVERPQHMLMRV 174
+ + D + N +L+ I ++YFG +T+ YLL+ + V+E PQH MR+
Sbjct: 142 NERLRDFVAANTRKLNDAIDPLASRHFEYFGLRTVYDRYLLRHPQRRLVIETPQHFFMRI 201
Query: 175 AVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
A + ++I ++ Y ++S + +SPTLFNAGT QLSSC+L+ DS+E IYD
Sbjct: 202 ACALGGNEIGETLELYRLLSSLEYLASSPTLFNAGTAHEQLSSCYLLDSPRDSLESIYDK 261
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK AGGIG++ +R+ GS IRGTNG SNG+VP L+ + + V+QGG KRK
Sbjct: 262 YADVAKLSKFAGGIGLAYSRVRSRGSLIRGTNGHSNGLVPWLKTLDASVAAVNQGG-KRK 320
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA VYLE WHADI +FL+LR N G + RA +L A W+PD FM RV+++G WSLF P
Sbjct: 321 GAACVYLESWHADIKDFLELRDNTGDDARRAHNLNIANWIPDEFMRRVENDGEWSLFDPK 380
Query: 355 EAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKK 414
P D WG F+ Y K E +G A K V+A+ L+ ++++ +TG +M FKD CN
Sbjct: 381 VVPHFVDSWGEAFDAAYRKAEADGLAVKTVKARELYARMMRTLAQTGNGWMTFKDRCNAT 440
Query: 415 SNQ--QNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGS 472
SNQ + I SNLCTE+++ +S TETAVCNL S+ L R+V +
Sbjct: 441 SNQTAKPGNVIHLSNLCTEILEVSSATETAVCNLGSVNLARHVVDGA------------- 487
Query: 473 RGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
FDF++LA I LN++ID+NYYP++TAR +N++ RP+G+GV GL D F
Sbjct: 488 -------FDFDQLAATVRIAVRQLNRVIDLNYYPIDTARTANMKWRPVGLGVMGLQDVFF 540
Query: 533 LLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMW-G 591
L +PFDS EA L+ I E IY+HAL S E+A +G + + S + G LQ D W
Sbjct: 541 KLRLPFDSAEALALSTRIAEEIYFHALSQSCELAETDGAHPGFAESRAANGELQFDHWPN 600
Query: 592 VNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSG 651
P D W LR+ I ++G+RNSLL+A PTA+ + I G EC EP SN++ R LSG
Sbjct: 601 ATPHDIARWDALRERIKQHGLRNSLLIAIAPTATIASIAGCYECIEPQVSNLFKRETLSG 660
Query: 652 EFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLV 711
+F+ VN+HL +L +GLW+P I++ I +GS+Q I IP L+AIY+TVWE+ QK+L+
Sbjct: 661 DFLQVNRHLADELKTLGLWTPEIRDAIKLAEGSIQGIAAIPARLRAIYRTVWELPQKSLI 720
Query: 712 DMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTV 771
D+A RG +ID SQSLN+ M+ PN G+L+S++ +AW G+KT YYLRSR A K TV
Sbjct: 721 DLAASRGAWIDQSQSLNLFMENPNIGQLSSMYMYAWKSGIKT-TYYLRSRPATKIAKTTV 779
Query: 772 DTSVLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
V+D + A A + CSL N E C AC
Sbjct: 780 SA--------VSDQERANAA-VFCSLENPEYCEAC 805
>gi|426403938|ref|YP_007022909.1| ribonucleoside-diphosphate reductase subunit alpha [Bdellovibrio
bacteriovorus str. Tiberius]
gi|425860606|gb|AFY01642.1| ribonucleoside-diphosphate reductase alpha chain [Bdellovibrio
bacteriovorus str. Tiberius]
Length = 821
Score = 650 bits (1676), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/822 (41%), Positives = 498/822 (60%), Gaps = 46/822 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V KRDG E V KI R+ K GL+ DP+ V+ K +G+Y G +T +LD L
Sbjct: 29 MRVKKRDGTLEPVDVTKIVERVTKNCQGLT--QVDPLRVATKAISGLYDGASTKELDNLC 86
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
+TA+ + P+Y+ LAAR++ + + + + ++ D + G +A L+A+
Sbjct: 87 IQTASLLIGEDPEYSRLAARLLSTYIDEEVRSQKIQSFADSVSF-----GFQAGLLAEST 141
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRVAVGI 178
Y + N A L + I R ++YFG +T+ YLLK +V E PQ+ MRVA G+
Sbjct: 142 YKFVETNKAALCAAIEPYRTDRFEYFGLRTVYDRYLLKNPTTRQVFETPQYFFMRVACGL 201
Query: 179 HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKEC 238
+ ++ AI+ Y ++S + ++PTLFN+GT R Q+SSC+L+ D + IY +
Sbjct: 202 AQS-VEEAIEFYRLISSHDYMPSTPTLFNSGTMRPQMSSCYLLDSPSDDLTAIYQKYTDI 260
Query: 239 AIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA 298
A++SK AGGIGV+ +R+ GS I+GTNG SNGI+P L+ + + V+QGG KRKGA
Sbjct: 261 ALLSKFAGGIGVAYSRVRSRGSLIKGTNGHSNGIIPWLKTMDSSVAAVNQGG-KRKGAAC 319
Query: 299 VYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPG 358
VYLE WH DI EFL+LR N G E RA +L A WVPDLFM+RV+++ +WSLF P P
Sbjct: 320 VYLETWHGDIEEFLELRDNTGDEAKRAHNLNLANWVPDLFMKRVEADAMWSLFDPKVVPH 379
Query: 359 LADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQ 418
D +G EFE+ YT+ E++ K ++A++L+ ++K+ +TG +M FKD N K+NQ
Sbjct: 380 FVDTYGEEFEKAYTEAEEKKLYIKQLKARDLYSRMMKTLAQTGNGWMTFKDHANLKANQT 439
Query: 419 NLG--TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSK 476
I SNLCTE+++ TS ETAVCNL S+ L R+V +
Sbjct: 440 GEAGNVIHLSNLCTEILEVTSDKETAVCNLGSVNLSRHV--------------------E 479
Query: 477 NRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGM 536
N F+FEKLA + L++++D+N+YP+ TA+ SN + RP+G+GV GL D L+ +
Sbjct: 480 NGQFNFEKLARSVRTAVKYLDRVVDINFYPIGTAQDSNHKWRPVGLGVMGLQDALFLMKL 539
Query: 537 PFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSD 596
PFDS A+ L+ + E IYY+AL TS E+A + GP+ Y + +KG+LQ D+WGV PS
Sbjct: 540 PFDSAAARDLSARVQEEIYYNALVTSCELAEKHGPHGAYEQTKAAKGLLQYDLWGVTPSQ 599
Query: 597 RWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVV 656
+ L++ I K+G+RNSL++A PTA+ + I+G E EP SN++ R LSGEF+ +
Sbjct: 600 PERFEKLKEKIKKHGLRNSLMIAIAPTATIASIVGCYEAIEPQVSNLFKRETLSGEFMQI 659
Query: 657 NKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVD 716
NK+L+ DL MG+W+ ++N+I DGS+Q + IP ++K +Y+TVWEI K+LVDMA D
Sbjct: 660 NKYLVGDLKAMGIWTEDVRNEIKLQDGSIQDVAMIPPQIKELYRTVWEIPMKSLVDMAAD 719
Query: 717 RGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
RG YID +QSLN+ + P GKL+S++ +AW +G+KT YYLRSR A K TV S
Sbjct: 720 RGAYIDQAQSLNLFQESPTIGKLSSMYMYAWKKGVKT-TYYLRSRPATKIAKTTVKASSN 778
Query: 777 KENPKVTDD-DDAKMAQ-----------MVCSLTNREECMAC 806
NP ++ DA AQ + CSL N E C AC
Sbjct: 779 SANPTASESMMDAAPAQEAKKSYSDAEVIACSLENPEACEAC 820
>gi|328784177|ref|XP_001121495.2| PREDICTED: ribonucleoside-diphosphate reductase large subunit [Apis
mellifera]
Length = 610
Score = 649 bits (1675), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 311/527 (59%), Positives = 384/527 (72%), Gaps = 44/527 (8%)
Query: 308 IFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEF 367
+FEFLDL+KN GKEE+RAR+LFYALW+PDLFM+RV N +W+L CP+E+PGLAD WG EF
Sbjct: 102 VFEFLDLKKNTGKEENRARELFYALWIPDLFMKRVLDNDIWTLMCPHESPGLADVWGNEF 161
Query: 368 ERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSN 427
E LYT+YE E + K+ +QA++LW IL SQ+ETGTPYML+KD CN+KSN QN+GTIKSSN
Sbjct: 162 EILYTRYENEKRYKRQIQARDLWTAILISQVETGTPYMLYKDHCNRKSNHQNIGTIKSSN 221
Query: 428 LCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAE 487
LCTEV+QY+SP E AVCNLASIA+ +V + N+ FDF+KL +
Sbjct: 222 LCTEVVQYSSPDEVAVCNLASIAVNMFVNPI------------------NQTFDFQKLLK 263
Query: 488 VTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLN 547
VT IVT NL+KIIDVNYYP+ AR+SN RHRPIGIG+QGLAD F+L+ PF+S EAQ+LN
Sbjct: 264 VTKIVTCNLDKIIDVNYYPIPEARKSNFRHRPIGIGIQGLADAFLLMRYPFESEEAQKLN 323
Query: 548 KDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMI 607
IFET+YY AL S E+A +G YETY GSPVSKGILQ DMW V P++ WDW L+ I
Sbjct: 324 IQIFETLYYGALEASCELAEEKGTYETYEGSPVSKGILQYDMWNVIPTNLWDWTILKKKI 383
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEM 667
+K+GVRNSLL+APMPTAST+QILGNNE EPYTSNIY+RRVLSGEF VVN HLL DLTE
Sbjct: 384 AKHGVRNSLLIAPMPTASTAQILGNNESIEPYTSNIYTRRVLSGEFQVVNPHLLRDLTER 443
Query: 668 GLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSL 727
LW +KN+II ++GS+Q I +IP++LK +YKTVWEI QK ++ MA DRG +ID SQSL
Sbjct: 444 DLWDEDMKNEIIANNGSIQDIERIPDDLKMLYKTVWEIPQKIILKMAADRGAFIDQSQSL 503
Query: 728 NIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDD 787
N+HM +P KLTS+HF+ W GLKTGMYYLR++ AA+A++FTVD S L+ +T +
Sbjct: 504 NVHMAKPTTEKLTSMHFYGWKMGLKTGMYYLRTKPAANALQFTVDKSKLRNTSNITSNQS 563
Query: 788 AKMAQ--------------------------MVCSLTNREECMACGS 808
+ CS N + CMACGS
Sbjct: 564 INSENDNNEELNNSSQNGWLQDQNKEDVDIVLACSRENGDACMACGS 610
Score = 114 bits (284), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 61/95 (64%), Positives = 76/95 (80%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
MYV+KRDG++E VHFDKIT+R+ KL Y L +++ DP ++ +V +G+Y GVTT +LD LA
Sbjct: 7 MYVIKRDGRKEDVHFDKITSRISKLCYNLDMDYIDPSAITFRVISGLYSGVTTVELDNLA 66
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFS 95
AETAA MTT HPDYA LAARI +SNLHK T KSFS
Sbjct: 67 AETAATMTTKHPDYAILAARIAISNLHKETTKSFS 101
>gi|389774174|ref|ZP_10192321.1| ribonucleoside-diphosphate reductase subunit alpha [Rhodanobacter
spathiphylli B39]
gi|388438589|gb|EIL95334.1| ribonucleoside-diphosphate reductase subunit alpha [Rhodanobacter
spathiphylli B39]
Length = 812
Score = 647 bits (1670), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/815 (42%), Positives = 489/815 (60%), Gaps = 51/815 (6%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KR+G QEAV +KI + + + GL DP+ V+ K G+Y G TT++LD+L+
Sbjct: 39 MHVTKRNGGQEAVDVNKIVRAVTRSAEGL--HGVDPLRVALKTIGGLYDGATTAELDQLS 96
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTK----KSFSETIKDMYNHYNERSGLKAPLI 116
TAAA+T P+Y LAAR++ + + K +SFS++I G ++
Sbjct: 97 IRTAAALTAEEPEYGQLAARLLGAYIDKEVSGQEIQSFSQSIA---------RGASLSIL 147
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLK-VQGK-VVERPQHMLMRV 174
D + D + NA +L+ I ++YFG +T+ YLL+ Q + V+E PQH MR+
Sbjct: 148 NDRLRDFVAANARKLNDAIDPLATRRFEYFGLRTVYDRYLLRHPQTRLVIETPQHFFMRI 207
Query: 175 AVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
A + ++I ++ Y ++S + +SPTLFNAGT QLSSC+L+ DS+E IYD
Sbjct: 208 ACALGGNEIGETLELYRLLSSLEYIASSPTLFNAGTCHEQLSSCYLLDSPVDSLESIYDK 267
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK AGGIG++ +R+ GS IRGTNG SNG++P L+ + + V+QGG KRK
Sbjct: 268 YADVAKLSKFAGGIGLAYSRVRSRGSLIRGTNGHSNGLLPWLKTLDASVAAVNQGG-KRK 326
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA VYLE WHADI +FL+LR N G + RA +L A W+PD FM RV+++G WSLF P
Sbjct: 327 GAACVYLESWHADIEDFLELRDNTGDDARRAHNLNIANWIPDEFMRRVENDGDWSLFDPK 386
Query: 355 EAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKK 414
P D WG F+ Y K E +G A K V+A+ L+ ++++ +TG +M FKD CN
Sbjct: 387 VVPHFVDSWGEAFDAAYRKAEADGLAVKTVKARELYARMMRTLAQTGNGWMTFKDRCNAT 446
Query: 415 SNQ--QNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGS 472
SNQ + I SNLCTE+++ +S ETAVCNL S+ L R+V +
Sbjct: 447 SNQTAKTGNVIHLSNLCTEILEVSSVDETAVCNLGSVNLARHVTDGA------------- 493
Query: 473 RGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
FD+++LA LN++ID+NYYP+ TAR +N++ RP+G+GV GL D F
Sbjct: 494 -------FDYDQLAATVRTAVRQLNRVIDLNYYPIATARTANMKWRPVGLGVMGLQDVFF 546
Query: 533 LLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMW-G 591
L +PFDS EA L+ I E IY+HAL S E+A EG + + S + G LQ D W
Sbjct: 547 KLRLPFDSAEALALSTRIAEEIYFHALSQSCELARVEGAHPGFAESRAASGELQFDHWPQ 606
Query: 592 VNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSG 651
P D W LR+ I ++G+RNSLL+A PTA+ + I G EC EP SN++ R LSG
Sbjct: 607 ATPHDDTRWHALREQIRQHGLRNSLLIAIAPTATIASIAGCYECIEPQVSNLFKRETLSG 666
Query: 652 EFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLV 711
+F+ VN+HL +L +GLW+ I++ I +GS+Q I IPE L+AIY+TVWE+ QK L+
Sbjct: 667 DFLQVNRHLADELKALGLWTSDIRDAIKLAEGSIQGIAAIPERLRAIYRTVWELPQKALI 726
Query: 712 DMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTV 771
++A RG YID SQSLN+ M+ PN G+L+S++ +AW G+KT YYLRSR A K TV
Sbjct: 727 ELAAARGAYIDQSQSLNLFMENPNIGQLSSMYMYAWKAGIKT-TYYLRSRPATKIAKTTV 785
Query: 772 DTSVLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
S L + + T A + CSL N E C AC
Sbjct: 786 --SSLPDQAQAT-------AAVFCSLENPEYCEAC 811
>gi|42523461|ref|NP_968841.1| ribonucleoside-diphosphate reductase alpha chain [Bdellovibrio
bacteriovorus HD100]
gi|39575667|emb|CAE79834.1| ribonucleoside-diphosphate reductase alpha chain [Bdellovibrio
bacteriovorus HD100]
Length = 801
Score = 645 bits (1663), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/822 (41%), Positives = 498/822 (60%), Gaps = 46/822 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V KRDG E V KI R+ K GL+ DP+ V+ K +G+Y G +T +LD L
Sbjct: 9 MRVKKRDGTLEPVDVTKIVERVTKNCQGLT--QVDPLRVATKAISGLYDGASTKELDNLC 66
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
+TA+ + P+Y+ LAAR++ + + + + ++ D + G +A L+A+
Sbjct: 67 IQTASLLIGEDPEYSRLAARLLSTYIDEEVRSQKIQSFADSVSF-----GYQAGLLAEHT 121
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRVAVGI 178
Y + N A L + I R ++YFG +T+ YLLK +V E PQ+ MRVA G+
Sbjct: 122 YKFVETNKAALCAAIEPYRTDRFEYFGLRTVYDRYLLKNPTTRQVFETPQYFFMRVACGL 181
Query: 179 HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKEC 238
+ ++ AI+ Y ++S + ++PTLFN+GT R Q+SSC+L+ D + IY +
Sbjct: 182 AQS-VEEAIEFYRLISSHDYMPSTPTLFNSGTMRPQMSSCYLLDSPSDDLSAIYQKYTDI 240
Query: 239 AIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA 298
A++SK AGGIGV+ +R+ GS I+GTNG SNGI+P L+ + + V+QGG KRKGA
Sbjct: 241 ALLSKFAGGIGVAYSRVRSRGSLIKGTNGHSNGIIPWLKTMDSSVAAVNQGG-KRKGAAC 299
Query: 299 VYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPG 358
VYLE WH DI EFL+LR N G E RA +L A WVPDLFM+RV+++ +WSLF P P
Sbjct: 300 VYLETWHGDIEEFLELRDNTGDEAKRAHNLNLANWVPDLFMKRVEADAMWSLFDPKVVPH 359
Query: 359 LADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQ- 417
D +G EFE+ Y + E++ K ++A++L+ ++K+ +TG +M FKD N K+NQ
Sbjct: 360 FVDTYGEEFEKAYVEAEEKKLYIKQLKARDLYSRMMKTLAQTGNGWMTFKDHANLKANQT 419
Query: 418 -QNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSK 476
+ I SNLCTE+++ TS ETAVCNL S+ L R+V +
Sbjct: 420 GEAGNVIHLSNLCTEILEVTSDKETAVCNLGSVNLARHV--------------------E 459
Query: 477 NRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGM 536
N F+FEKLA + L++++D+N+YP+ TA+ SN + RP+G+GV GL D L+ +
Sbjct: 460 NGQFNFEKLARSVRTAVKYLDRVVDINFYPIPTAQDSNHKWRPVGLGVMGLQDALFLMKL 519
Query: 537 PFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSD 596
PFDS A+ L+ + E IYY+AL TS E++ + GP+ + + +KG+LQ D+WGV PS
Sbjct: 520 PFDSAAARDLSAKVQEEIYYNALVTSCELSEKHGPHGAFEQTKAAKGLLQYDLWGVTPSQ 579
Query: 597 RWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVV 656
+ L++ I K+G+RNSL++A PTA+ + I+G E EP SN++ R LSGEF+ +
Sbjct: 580 PERFEKLKEKIKKHGLRNSLMIAIAPTATIASIVGCYEAIEPQVSNLFKRETLSGEFMQI 639
Query: 657 NKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVD 716
NK+L+ DL MG+W+ ++N+I DGS+Q + IP ++K +Y+TVWEI K+LVDMA D
Sbjct: 640 NKYLVSDLKAMGIWTEEVRNEIKLQDGSIQDVAMIPPQIKELYRTVWEIPMKSLVDMAAD 699
Query: 717 RGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
RG YID +QSLN+ + P GKL+S++ +AW +G+KT YYLRSR A K TV S
Sbjct: 700 RGAYIDQAQSLNLFQESPTIGKLSSMYMYAWKKGVKT-TYYLRSRPATKIAKTTVKASSN 758
Query: 777 KENPKVTDD-DDAKMAQ-----------MVCSLTNREECMAC 806
NP ++ DA AQ + CSL N E C AC
Sbjct: 759 SANPTASESMMDAAPAQEAKKSYSDAEVIACSLENPEACEAC 800
>gi|338536258|ref|YP_004669592.1| ribonucleoside-diphosphate reductase subunit alpha [Myxococcus
fulvus HW-1]
gi|337262354|gb|AEI68514.1| ribonucleoside-diphosphate reductase, alpha subunit [Myxococcus
fulvus HW-1]
Length = 838
Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/817 (41%), Positives = 494/817 (60%), Gaps = 44/817 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V KR+G E V +KI + + GL D + V+ K +G+Y G TT +LD L+
Sbjct: 54 MRVRKRNGGTETVDLNKIVRAVGRSCQGLP--RVDAMRVATKTISGLYDGATTRELDSLS 111
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLI 116
+TAAA+ P+Y L+AR++ + + K SFS+++ +G K LI
Sbjct: 112 IQTAAALIVEEPEYGRLSARLLATFIQKEVSNQDIHSFSQSVA---------AGHKHGLI 162
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRV 174
AD + + NA +L++ I R+ ++YFG +T+ YLLK +V+E PQ +RV
Sbjct: 163 ADRLLQFVQANARKLNAAIDPSRNDLFEYFGLRTVYDRYLLKNPQTREVLETPQEFFLRV 222
Query: 175 AVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
A + D+++ AI+ Y + S + +SPTLFN+GT QLSSCFL+ D ++ IY
Sbjct: 223 ASALSGDNVNEAIELYRLFSSLEYLPSSPTLFNSGTRHEQLSSCFLLDSPADELDAIYKK 282
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A++SK +GGIGV+ H +RA GS I+ TNG SNGIVP L+ + + V+QGG KRK
Sbjct: 283 YSDIAMLSKFSGGIGVAYHRVRARGSLIKSTNGHSNGIVPWLKTLDASVAAVNQGG-KRK 341
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA VYLE WHADI +FL+LR+N G + R +L A WVPDLFM+RV+++G WSLF P
Sbjct: 342 GACCVYLETWHADIEDFLELRENTGDDARRTHNLNLANWVPDLFMKRVEADGDWSLFDPK 401
Query: 355 EAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKK 414
P D +G FE+ Y K E +G A + V+A++L+ ++KS +TG +M FKD N+K
Sbjct: 402 AVPHFTDLYGDAFEQAYAKAEADGLAMRKVKARDLYARMMKSLAQTGNGWMTFKDISNRK 461
Query: 415 SNQ--QNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGS 472
SNQ ++ I SNLCTE+++ TS ETAVCNL S+ L R LV
Sbjct: 462 SNQTGKDGNVIHLSNLCTEILEVTSQGETAVCNLGSLNLSRM--------------LVDG 507
Query: 473 RGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
+ FDFE+L + L+++ID+NYYP+ A SN R RP+G+G+ GL D F
Sbjct: 508 K------FDFERLRANAQLAMRQLDRVIDLNYYPIPAAASSNKRWRPVGLGLMGLQDVFF 561
Query: 533 LLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGV 592
L + FDS EA+ L+K I E IY+ AL TS E+A + G + ++ + ++G LQ D WGV
Sbjct: 562 QLKLAFDSAEARALSKKISEEIYFAALTTSCELAEQYGAHASFPETRAARGELQFDHWGV 621
Query: 593 NPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
P D W LR I K+G+RNSL++A PTA+ + I+G EC EP SN++ R LSG+
Sbjct: 622 VPEDTARWDALRQRIMKHGLRNSLMIAIAPTATIASIVGCYECIEPQVSNLFKRETLSGD 681
Query: 653 FVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVD 712
F+ VN++L+ DL +GLW+ +N+I +GSVQ + ++PE L+A+Y+T WE+ ++L+D
Sbjct: 682 FLQVNRYLVRDLQALGLWNENTRNRIKMAEGSVQDLTELPEHLRAVYRTAWELPMRSLLD 741
Query: 713 MAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
M DRG +ID SQSLN+ ++ PN GKL+S++F+AW +GLKT YYLRSR A K TV
Sbjct: 742 MGADRGAFIDQSQSLNLFVETPNIGKLSSMYFYAWQKGLKT-TYYLRSRPATRIAKATVG 800
Query: 773 T---SVLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
+ + + + + CSL N E C AC
Sbjct: 801 AGGGASVAQAAPAPVAKATEAEAVACSLENPEACEAC 837
>gi|320107275|ref|YP_004182865.1| ribonucleoside-diphosphate reductase subunit alpha [Terriglobus
saanensis SP1PR4]
gi|319925796|gb|ADV82871.1| ribonucleoside-diphosphate reductase, alpha subunit [Terriglobus
saanensis SP1PR4]
Length = 815
Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 343/822 (41%), Positives = 495/822 (60%), Gaps = 54/822 (6%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V KR+G E V +KI +++ ++GL D + ++ K G+Y G TT +LD ++
Sbjct: 31 MGVRKRNGALEPVDVNKIVRAVQRNAHGLG--QVDAIRIASKTIGGLYDGATTRELDSIS 88
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTK----KSFSETIKDMYNHYNERSGLKAPLI 116
+TAA++ P Y+ LAAR+++ + K SFS++I Y + G+ +
Sbjct: 89 IDTAASLIAEEPQYSKLAARLLLGTIMKEVVGQNLHSFSQSIS-----YGYQEGVVSKAT 143
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRV 174
A+ V + K ++ E+ DR ++YFG +T+ YLL+ + KV+E PQH +RV
Sbjct: 144 AEFVQTHMRKLNHAINDEL-SDR---FEYFGLRTVYDRYLLRDPISRKVIETPQHFFLRV 199
Query: 175 AVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
A G+ AI+ Y++++ + +SPTLFN+GT AQ+SSC+L DS++ IYDT
Sbjct: 200 ACGLAGTP-HEAIEFYNLIASHDYMPSSPTLFNSGTKHAQMSSCYLHDSPLDSLDSIYDT 258
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
K A++SK +GGIG++ H +R+ GS IR TNG SNGIVP LR + + V+QGG KRK
Sbjct: 259 YKNVALLSKFSGGIGLAFHRVRSEGSLIRATNGLSNGIVPWLRTLDSSVAAVNQGG-KRK 317
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA VYLEPWHADI FL+LR+N G R +L A W+PDLFM+RV +G+WSLF P
Sbjct: 318 GACCVYLEPWHADIESFLELRENTGDLSRRTYNLNLANWIPDLFMQRVDEDGIWSLFDPK 377
Query: 355 EAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKK 414
E P D +G EFE Y + E + K + ++A++L+ +++S ETG +M FKD CN K
Sbjct: 378 EVPTFPDLYGKEFEEAYIQAETDKKYHRQIKARDLYMRMMRSLAETGNGWMTFKDACNIK 437
Query: 415 SNQQNL--GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGS 472
+NQ + SNLCTE+ + TS ETAVCNL S+ L R+V G
Sbjct: 438 NNQTGKPGNVVHLSNLCTEITEVTSKDETAVCNLGSVNLARHVTPEG------------- 484
Query: 473 RGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
FDFEKLA I L+++ID+NYYPV A +N R RP+G+GV GL D F
Sbjct: 485 ------KFDFEKLANTVRIAVPMLDRVIDINYYPVPQAASANARWRPVGLGVMGLQDVFF 538
Query: 533 LLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGV 592
+ +PFDS EA ++ I E IYY+A+ S E+A REG + ++ + ++KG Q D+W V
Sbjct: 539 QMRIPFDSPEALAISTKIQEEIYYYAVLASVELAEREGKHPSFDETRLAKGEFQFDLWNV 598
Query: 593 NPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
P+D W LR I K+G+RNSLL+A PTA+ + I+G EC EP SN++ R LSGE
Sbjct: 599 KPADPERWDALRQRILKSGIRNSLLIAIAPTATIASIVGCYECIEPQISNLFKRETLSGE 658
Query: 653 FVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVD 712
F+ VN++L+ +L + G+W+ ++ ++ +GSVQ + +PE+L+A+Y+TVWE+ ++L+D
Sbjct: 659 FLQVNRYLIEELKQRGMWTEEMRVRMKMSEGSVQAMEDLPEDLRAVYRTVWEVPMRSLID 718
Query: 713 MAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTV- 771
MA DR +ID SQSLN+ + PN G+L+S++ HAW GLKT YYLRSR A K TV
Sbjct: 719 MARDRNAFIDQSQSLNLFAESPNIGRLSSMYMHAWKSGLKT-TYYLRSRPATKISKTTVS 777
Query: 772 -------DTSVLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
+ PKV D + + CSL N E C AC
Sbjct: 778 KAAAASAALADTASRPKVADAE-----AIACSLENPESCEAC 814
>gi|115378662|ref|ZP_01465812.1| ribonucleoside-diphosphate reductase, alpha subunit [Stigmatella
aurantiaca DW4/3-1]
gi|115364328|gb|EAU63413.1| ribonucleoside-diphosphate reductase, alpha subunit [Stigmatella
aurantiaca DW4/3-1]
Length = 800
Score = 643 bits (1659), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 352/837 (42%), Positives = 498/837 (59%), Gaps = 70/837 (8%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V KR+G E V +KI + + GL+ D + VS K +G+Y G TT +LD L+
Sbjct: 2 MRVRKRNGSSEPVDLNKIVRAVGRCCAGLT--RVDALRVSTKTISGLYDGATTRELDSLS 59
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLI 116
+TAAA+ P+YA L+AR++ + + K SFS+++ +G K LI
Sbjct: 60 IQTAAALIVEEPEYARLSARLLDTFIQKEVSNQEIHSFSQSVA---------AGHKHGLI 110
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRV 174
AD + + NA +L++ + R+ ++YFG +T+ YLLK +V+E PQ +RV
Sbjct: 111 ADRLLQFVQANARKLNAAVDASRNDLFEYFGLRTVYDRYLLKNPQTREVIETPQDFFLRV 170
Query: 175 AVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
A + D AI+ Y + S + +SPTLFNAGT QLSSCFL+ D +E IY
Sbjct: 171 ACAL-TDTAKDAIELYRLFSSLEYLPSSPTLFNAGTRHEQLSSCFLLDSPSDELESIYRK 229
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A++SK +GGIGV+ H +RA GS IR TNG SNGIVP L+ + + V+QGG KRK
Sbjct: 230 YTDIAMLSKFSGGIGVAYHRVRARGSLIRSTNGHSNGIVPWLKTLDASVAAVNQGG-KRK 288
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA VYLE WHADI +FL+LR N G E R +L A WV DLFM RV+++ WSLF P
Sbjct: 289 GACCVYLETWHADIEDFLELRDNTGDEARRTHNLNLANWVSDLFMRRVEADQEWSLFDPK 348
Query: 355 EAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKK 414
P L D +G FER Y E +G A + V+A++L+ ++K+ +TG +M FKD N+K
Sbjct: 349 TVPHLTDLYGEAFERAYAAAEAQGLAARKVKARDLYARMMKTLAQTGNGWMTFKDISNRK 408
Query: 415 SNQ--QNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGS 472
SNQ ++ I SNLCTE+++ T+ +ETAVCNL S+ L R + S
Sbjct: 409 SNQTGKDGNVIHLSNLCTEILEVTNASETAVCNLGSLNLGRML----------------S 452
Query: 473 RGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
G FDFE+L + L+++ID+NYYP+ TA SN R RP+G+G+ GL D F
Sbjct: 453 DGK----FDFERLRVNVQLAIRQLDRVIDLNYYPIPTAAASNSRWRPVGLGLMGLQDVFF 508
Query: 533 LLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGV 592
L MPFD+ EA+ L+K I E IY+ AL TS ++A + GP++ + + + G LQ D WGV
Sbjct: 509 QLRMPFDAPEARALSKKISEEIYFSALTTSCDLAEQHGPHQAFSETRAAHGELQFDAWGV 568
Query: 593 NPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
P D W LR+ I K G+RNSL++A PTA+ + I G EC EP SN++ R LSG+
Sbjct: 569 VPEDTARWAALRERIQKFGLRNSLMIAIAPTATIASIAGCYECIEPQVSNLFKRETLSGD 628
Query: 653 FVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVD 712
F+ VNK+L+ +L +GLW+ +++K+ +GSVQ + ++P ELKAIY+T WE+ ++L+D
Sbjct: 629 FLQVNKYLVRELQALGLWNDAMRSKLKMSEGSVQDLTELPAELKAIYRTAWEVPMRSLID 688
Query: 713 MAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
MA DRG +ID SQSLN+ ++ PN GK++S++F+AW +GLKT YY+RSR A K TVD
Sbjct: 689 MAADRGAFIDQSQSLNLFVEAPNIGKMSSMYFYAWQKGLKT-TYYMRSRPATRITKTTVD 747
Query: 773 TS-----------------------VLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
TS + PK T+ + + CSL N E C AC
Sbjct: 748 TSHGQNASVAPNMPVASAAPAAPAPTVTAEPKYTEAE-----ALACSLENPEMCEAC 799
>gi|351714774|gb|EHB17693.1| Ribonucleoside-diphosphate reductase large subunit [Heterocephalus
glaber]
Length = 542
Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 337/649 (51%), Positives = 420/649 (64%), Gaps = 118/649 (18%)
Query: 31 IEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNT 90
++ DP ++ KV +Y GVTT +LD LAAETAA +TT HPDYA LAARI VSNLHK T
Sbjct: 1 MDFVDPAYITVKVIQALYCGVTTVELDTLAAETAATLTTKHPDYAILAARIAVSNLHKET 60
Query: 91 KKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKT 150
KK FS+ ++ +YN+ N +G +P++A DI++ + RL+S IIYDRDF Y+YFGFKT
Sbjct: 61 KKVFSDVMEVLYNYINPHNGKHSPMVAQSTLDIVLSSKDRLNSAIIYDRDFSYNYFGFKT 120
Query: 151 LERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGT 210
LERS LLK+ GKVVERP+HMLMRV+VGIHK+DID+A +TY+++S++WFTHASP L
Sbjct: 121 LERSCLLKINGKVVERPRHMLMRVSVGIHKEDIDAATETYNLLSEKWFTHASPIL----- 175
Query: 211 PRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSN 270
C+ YI GTNG SN
Sbjct: 176 ------QCW-----------------------------------------YIAGTNGNSN 188
Query: 271 GIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFY 330
G+VPMLR++N T RYVDQ
Sbjct: 189 GLVPMLRMYNSTGRYVDQ------------------------------------------ 206
Query: 331 ALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLW 390
DLFM++V++N W L CPNE PGL + WG EFE LY YE++G ++VV+AQ LW
Sbjct: 207 -----DLFMKQVETNQDWPLICPNECPGLDEVWGEEFEMLYESYEEQGHVRRVVKAQQLW 261
Query: 391 FEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIA 450
+ I+++Q ETGTPYML+KD+ N+KSNQQNLGTIK SNLCTE+++YTS E AVCNLAS+A
Sbjct: 262 YAIIETQTETGTPYMLYKDSYNQKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASLA 321
Query: 451 LPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETA 510
L YV + H +DF+KLAEVT ++ NLNKII++NYYPV A
Sbjct: 322 LKMYV------ISEHT-------------YDFKKLAEVTKVIVRNLNKIININYYPVPEA 362
Query: 511 RRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREG 570
SN H PIGIGVQ LADTFIL+ PF+S EAQ LNK IFETIYY AL S ++A
Sbjct: 363 HLSNKHHCPIGIGVQDLADTFILMRYPFESPEAQLLNKQIFETIYYVALEASCDLAKEHD 422
Query: 571 PYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQIL 630
PYETY GSPVSKGIL +MW V P+D WDW L++ I+K G+RNSLL+AP+PTAST+QIL
Sbjct: 423 PYETYEGSPVSKGILWYEMWNVTPTDLWDWKLLKEKIAKYGIRNSLLIAPIPTASTAQIL 482
Query: 631 GNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKII 679
GNNE EPYTSNIY+RR+LSGEF + N HLL DLTE GLW+ +KN+II
Sbjct: 483 GNNESIEPYTSNIYTRRILSGEFQIANPHLLKDLTEWGLWNEEMKNQII 531
>gi|310823069|ref|YP_003955427.1| ribonucleoside-diphosphate reductase [Stigmatella aurantiaca
DW4/3-1]
gi|309396141|gb|ADO73600.1| Ribonucleoside-diphosphate reductase [Stigmatella aurantiaca
DW4/3-1]
Length = 841
Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 350/837 (41%), Positives = 497/837 (59%), Gaps = 70/837 (8%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V KR+G E V +KI + + GL+ D + VS K +G+Y G TT +LD L+
Sbjct: 43 MRVRKRNGSSEPVDLNKIVRAVGRCCAGLT--RVDALRVSTKTISGLYDGATTRELDSLS 100
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLI 116
+TAAA+ P+YA L+AR++ + + K SFS+++ +G K LI
Sbjct: 101 IQTAAALIVEEPEYARLSARLLDTFIQKEVSNQEIHSFSQSVA---------AGHKHGLI 151
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRV 174
AD + + NA +L++ + R+ ++YFG +T+ YLLK +V+E PQ +RV
Sbjct: 152 ADRLLQFVQANARKLNAAVDASRNDLFEYFGLRTVYDRYLLKNPQTREVIETPQDFFLRV 211
Query: 175 AVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
A + D AI+ Y + S + +SPTLFNAGT QLSSCFL+ D +E IY
Sbjct: 212 ACAL-TDTAKDAIELYRLFSSLEYLPSSPTLFNAGTRHEQLSSCFLLDSPSDELESIYRK 270
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A++SK +GGIGV+ H +RA GS IR TNG SNGIVP L+ + + V+QGG KRK
Sbjct: 271 YTDIAMLSKFSGGIGVAYHRVRARGSLIRSTNGHSNGIVPWLKTLDASVAAVNQGG-KRK 329
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA VYLE WHADI +FL+LR N G E R +L A WV DLFM RV+++ WSLF P
Sbjct: 330 GACCVYLETWHADIEDFLELRDNTGDEARRTHNLNLANWVSDLFMRRVEADQEWSLFDPK 389
Query: 355 EAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKK 414
P L D +G FER Y E +G A + V+A++L+ ++K+ +TG +M FKD N+K
Sbjct: 390 TVPHLTDLYGEAFERAYAAAEAQGLAARKVKARDLYARMMKTLAQTGNGWMTFKDISNRK 449
Query: 415 SNQ--QNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGS 472
SNQ ++ I SNLCTE+++ T+ +ETAVCNL S+ L R +
Sbjct: 450 SNQTGKDGNVIHLSNLCTEILEVTNASETAVCNLGSLNLGRML----------------- 492
Query: 473 RGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
+ FDFE+L + L+++ID+NYYP+ TA SN R RP+G+G+ GL D F
Sbjct: 493 ---SDGKFDFERLRVNVQLAIRQLDRVIDLNYYPIPTAAASNSRWRPVGLGLMGLQDVFF 549
Query: 533 LLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGV 592
L MPFD+ EA+ L+K I E IY+ AL TS ++A + GP++ + + + G LQ D WGV
Sbjct: 550 QLRMPFDAPEARALSKKISEEIYFSALTTSCDLAEQHGPHQAFSETRAAHGELQFDAWGV 609
Query: 593 NPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
P D W LR+ I K G+RNSL++A PTA+ + I G EC EP SN++ R LSG+
Sbjct: 610 VPEDTARWAALRERIQKFGLRNSLMIAIAPTATIASIAGCYECIEPQVSNLFKRETLSGD 669
Query: 653 FVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVD 712
F+ VNK+L+ +L +GLW+ +++K+ +GSVQ + ++P ELKAIY+T WE+ ++L+D
Sbjct: 670 FLQVNKYLVRELQALGLWNDAMRSKLKMSEGSVQDLTELPAELKAIYRTAWEVPMRSLID 729
Query: 713 MAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
MA DRG +ID SQSLN+ ++ PN GK++S++F+AW +GLKT YY+RSR A K TVD
Sbjct: 730 MAADRGAFIDQSQSLNLFVEAPNIGKMSSMYFYAWQKGLKT-TYYMRSRPATRITKTTVD 788
Query: 773 TS-----------------------VLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
TS + PK T+ + + CSL N E C AC
Sbjct: 789 TSHGQNASVAPNMPVASAAPAAPAPTVTAEPKYTEAE-----ALACSLENPEMCEAC 840
>gi|225873705|ref|YP_002755164.1| ribonucleoside-diphosphate reductase subunit alpha [Acidobacterium
capsulatum ATCC 51196]
gi|225791715|gb|ACO31805.1| ribonucleoside-diphosphate reductase, alpha subunit [Acidobacterium
capsulatum ATCC 51196]
Length = 792
Score = 642 bits (1657), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/814 (42%), Positives = 490/814 (60%), Gaps = 54/814 (6%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KR+G+ E V +KI +++ S GLS D + V+ K G+Y G TT +LD ++
Sbjct: 24 MHVRKRNGELEPVDVNKIVRAVQRCSAGLS--QVDAIRVASKTIGGLYDGATTRELDAIS 81
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTK----KSFSETIKDMYNHYNERSGLKAPLI 116
+TAA++ P Y+ LAAR+++ + K SFS++I+ Y + G+
Sbjct: 82 IDTAASLIAEEPQYSKLAARLLLGTILKEVAGQNLHSFSQSIE-----YAHQEGVVNAAT 136
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRV 174
A+ + +A +L+ I +++FG +T+ YLL+ + KV+E PQ+ +RV
Sbjct: 137 AE----FVRTHARKLNYAIDEQLSDRFEFFGLRTVYDRYLLRDPLSRKVIETPQYFFLRV 192
Query: 175 AVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
A G+ AI+ Y +++ + +SPTLFN+GT Q+SSC+L DS+E IYDT
Sbjct: 193 ACGLAGTP-HEAIEFYRLIASHDYMPSSPTLFNSGTKHPQMSSCYLHDSPSDSLESIYDT 251
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
K+ A++SK +GGIG++ H +R+ GS IR TNG SNGIVP LR + + V+QGG KRK
Sbjct: 252 YKDVALLSKFSGGIGLAFHRVRSEGSLIRATNGLSNGIVPWLRTLDSSVAAVNQGG-KRK 310
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA VYLEPWHAD+ +FL+LR+N G R +L A W+PDLFM RV+ +G+WSLF P
Sbjct: 311 GACCVYLEPWHADVEQFLELRENTGDLSRRTYNLNLANWIPDLFMRRVEEDGMWSLFDPK 370
Query: 355 EAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKK 414
P L D +G EF+ Y K E E + ++A++L+ +++S ETG +M FKD CN K
Sbjct: 371 VVPQLPDLYGVEFDAAYEKAEAEQLYARQIKARDLYARMMRSLAETGNGWMTFKDACNLK 430
Query: 415 SNQQNL--GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGS 472
NQ + SNLCTE+ + TS ETAVCNL SI L R+V
Sbjct: 431 CNQTGKPGNVVHLSNLCTEITEVTSRDETAVCNLGSINLARHV----------------- 473
Query: 473 RGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
N FDFEKLAE + L+++ID+NYYPV A +N R RP+G+G+ GL D F
Sbjct: 474 ---ANGAFDFEKLAETVRVAVPMLDRVIDINYYPVHQAASANSRWRPVGLGLMGLQDVFF 530
Query: 533 LLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGV 592
L MPFDS EAQQL+ I E IYYHAL S E+A ++G + + + ++ G LQ D+WGV
Sbjct: 531 QLRMPFDSPEAQQLSTHIQEEIYYHALAASCELAEKQGAHPAFAETRLAAGQLQFDLWGV 590
Query: 593 NPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
P+D W LR I ++GVRNSLL+A PTA+ + I+G EC EP SN++ R LSGE
Sbjct: 591 KPADEARWNTLRARIQQHGVRNSLLIAIAPTATIASIVGCYECTEPQVSNLFKRETLSGE 650
Query: 653 FVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVD 712
F+ VN++L+ DL E GLW+ ++ ++ +GSVQ I IP++LK IY+TVWE+ + ++D
Sbjct: 651 FLQVNRYLVTDLKERGLWNEELRMRLKLGEGSVQAIDGIPDDLKQIYRTVWELPMRAIID 710
Query: 713 MAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
+A +R +ID SQSLN+ + PN G+L+S++ +AW GLKT YYLRSR A K TV
Sbjct: 711 LARERSPFIDQSQSLNLFAESPNIGRLSSMYMYAWKSGLKT-TYYLRSRPATRIAKTTVA 769
Query: 773 TSVLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
++ A + CSL N C AC
Sbjct: 770 SA------------KNATAAVACSLENPGSCEAC 791
>gi|352086177|ref|ZP_08953756.1| ribonucleoside-diphosphate reductase, alpha subunit [Rhodanobacter
sp. 2APBS1]
gi|351679811|gb|EHA62945.1| ribonucleoside-diphosphate reductase, alpha subunit [Rhodanobacter
sp. 2APBS1]
Length = 806
Score = 641 bits (1654), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 342/815 (41%), Positives = 486/815 (59%), Gaps = 51/815 (6%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V KR+G QEAV +KI + + + GL DP+ V+ K G+Y G TT++LD+L+
Sbjct: 33 MRVTKRNGGQEAVDVNKIVRAVTRSAEGL--HGVDPLRVTLKTIGGLYDGATTAELDQLS 90
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTK----KSFSETIKDMYNHYNERSGLKAPLI 116
AAA+T P+Y LAAR++ + + K +S+S++I G + L+
Sbjct: 91 IRIAAALTAEEPEYGQLAARLLGAYIDKEVSGQEIQSYSQSIA---------RGTELGLL 141
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGK--VVERPQHMLMRV 174
+ + D + N +L+ I ++YFG +T+ YLL+ + V+E PQH MR+
Sbjct: 142 NERLRDFVAANTRKLNDAIDPLASRHFEYFGLRTVYDRYLLRHPQRRLVIETPQHFFMRI 201
Query: 175 AVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
A + ++I ++ Y ++S + +SPTLFNAGT QLSSC+L+ DS+E IYD
Sbjct: 202 ACALGGNEIGETLELYRLLSSLEYLASSPTLFNAGTAHEQLSSCYLLDSPRDSLESIYDK 261
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK AGGIG++ +R+ GS IRGTNG SNG+VP L+ + + V+QGG KRK
Sbjct: 262 YADVAKLSKFAGGIGLAYSRVRSRGSLIRGTNGHSNGLVPWLKTLDASVAAVNQGG-KRK 320
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA VYLE WHADI +FL+LR N G + RA +L A W+PD FM RV+++G WSLF P
Sbjct: 321 GAACVYLESWHADIKDFLELRDNTGDDARRAHNLNIANWIPDEFMRRVENDGEWSLFDPK 380
Query: 355 EAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKK 414
P D WG F+ Y K E +G A K V+A+ L+ ++++ +TG +M FKD CN
Sbjct: 381 VVPHFVDSWGEAFDAAYRKAEADGLAVKTVKARELYARMMRTLAQTGNGWMTFKDRCNAT 440
Query: 415 SNQ--QNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGS 472
SNQ + I SNLCTE+++ +S TETAVCNL S+ L R+V +
Sbjct: 441 SNQTAKPGNVIHLSNLCTEILEVSSATETAVCNLGSVNLARHVVDGA------------- 487
Query: 473 RGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
FDF++LA I LN++ID+NYYP++TAR +N++ RP+G+GV GL D F
Sbjct: 488 -------FDFDQLAATVRIAVRQLNRVIDLNYYPIDTARTANMKWRPVGLGVMGLQDVFF 540
Query: 533 LLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMW-G 591
L +PFDS EA L+ I E IY++AL S E+A EG + + S + G LQ D W
Sbjct: 541 KLRLPFDSAEALALSTRIAEEIYFNALSQSCELAEAEGAHPGFAESRAANGELQFDHWPS 600
Query: 592 VNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSG 651
P D W LR+ I ++G+RNSLL+A PTA+ + I G EC EP SN++ R LSG
Sbjct: 601 AIPHDGARWNALRERIKQHGLRNSLLIAIAPTATIASIAGCYECIEPQVSNLFKRETLSG 660
Query: 652 EFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLV 711
+F+ VN++L +L +GLW+ I++ I +GS+Q I IPE L+ IY+TVWE+ QK+L+
Sbjct: 661 DFLQVNRYLADELKTLGLWTSEIRDAIKLAEGSIQGIAAIPERLRQIYRTVWELPQKSLI 720
Query: 712 DMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTV 771
D+A RG +ID SQSLN+ M+ PN G+L+S++ +AW G+KT YYLRSR A K TV
Sbjct: 721 DLAAARGAWIDQSQSLNLFMENPNIGQLSSMYMYAWKAGIKT-TYYLRSRPATKIAKTTV 779
Query: 772 DTSVLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
+ D A + CSL N E C AC
Sbjct: 780 SAA---------SDQAQANAAVFCSLENPEYCEAC 805
>gi|162452148|ref|YP_001614515.1| ribonucleoside-diphosphate reductase [Sorangium cellulosum So ce56]
gi|161162730|emb|CAN94035.1| Ribonucleoside-diphosphate reductase [Sorangium cellulosum So ce56]
Length = 838
Score = 640 bits (1650), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 339/829 (40%), Positives = 498/829 (60%), Gaps = 57/829 (6%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V KR+G E V +KI + + LS D + V+ K +G+Y G TT +LD+L+
Sbjct: 43 MRVKKRNGSSEPVDVNKIVRAVSRSCAALS--DVDALRVATKTISGLYDGATTRELDQLS 100
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLI 116
+TAA++ + P YA LAAR++ + + K + +FS+++ G + LI
Sbjct: 101 IQTAASLIADEPQYAKLAARLLATYIDKEVRNQEIHAFSQSVA---------VGRRLGLI 151
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGK--VVERPQHMLMRV 174
D ++ + +NA +L+ I RD + +YFG +TL YLLK V+E PQ +R+
Sbjct: 152 NDRLHGFVAQNARKLNDAIEPARDHELEYFGLRTLYDRYLLKHPETRLVIETPQQFFLRI 211
Query: 175 AVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
A + + A++ Y + S + +SPT+FN+GT QLSSCFL+ DD +E IY
Sbjct: 212 ACAL-SETAAQAVELYRLFSSLDYLPSSPTMFNSGTSHEQLSSCFLLDSPDDHLETIYQR 270
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A++SK +GGIG++ H +R+ GS IR TNG S+GIVP L+ + + V+QGG KRK
Sbjct: 271 YTDVAMLSKFSGGIGLAYHRVRSRGSLIRATNGHSSGIVPWLKTLDASVAAVNQGG-KRK 329
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA VYLEPWHAD+ EFL LR N G E R +L A WVPDLFM+RV+++G WSLF P
Sbjct: 330 GACCVYLEPWHADVEEFLSLRDNTGDEAARTHNLNLASWVPDLFMKRVEADGDWSLFDPK 389
Query: 355 EAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKK 414
+A L D +G EFER Y + E+ G AKK ++A+ L+ ++++ +TG +M FKD N+
Sbjct: 390 DARDLPDLYGEEFERRYVEAERAGLAKKTMKARELYARMMRTLAQTGNGWMTFKDKSNRA 449
Query: 415 SNQQNLG--TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGS 472
NQ L + SNLCTE+++ TS E+AVCNL SI L R H + L
Sbjct: 450 CNQTALPGRIVHLSNLCTEILEVTSNEESAVCNLGSINLAR-----------HTATLADG 498
Query: 473 RGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
+ FDFEKLA L+++ID+NYYP+ + RRSNLR RP+G+G+ GL D F
Sbjct: 499 AVA----FDFEKLARTVRTAVRQLDRVIDLNYYPIPSTRRSNLRWRPVGLGLMGLQDVFF 554
Query: 533 LLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGV 592
+ +PFD+ A++L++ I E +YYHAL TS+++AA +G + + + ++G LQ D WG
Sbjct: 555 QMRLPFDAPAARELSRRISEEVYYHALSTSADLAAEKGRHPAFDETRAARGELQFDAWGA 614
Query: 593 NPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
P D W LR + G+RNSLLVA PTA+ + I G EC EP SN++ R LSG+
Sbjct: 615 VPEDAARWEALRARVQAEGLRNSLLVAIAPTATIASIAGCYECIEPQVSNLFKRETLSGD 674
Query: 653 FVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVD 712
F+ +N++L+ +L +G W+ ++ ++ +GSVQ + ++PE+++A+++T WEI ++L+D
Sbjct: 675 FLQMNRYLVAELKRLGAWNDAVRARLKLAEGSVQGMDELPEQIRAVFRTAWEIPMRSLID 734
Query: 713 MAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
MA DRG +ID SQSLN+ ++ P G+L+S++FHAW +GLKT YYLRSR A K TV+
Sbjct: 735 MAADRGAFIDQSQSLNLFIENPTIGQLSSMYFHAWKKGLKT-TYYLRSRPATRIAKATVE 793
Query: 773 TSVLKENPKVTDDDDAK---------------MAQMVCSLTNREECMAC 806
P T DDA A + C+L N E C AC
Sbjct: 794 AP-----PDRTPGDDAAPRREGGWVPAPPAKAAADVACALENPEACEAC 837
>gi|444917550|ref|ZP_21237645.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Cystobacter fuscus DSM 2262]
gi|444710891|gb|ELW51852.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Cystobacter fuscus DSM 2262]
Length = 796
Score = 638 bits (1646), Expect = e-180, Method: Compositional matrix adjust.
Identities = 335/814 (41%), Positives = 488/814 (59%), Gaps = 45/814 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V KR+G EA +KI + + GL D + V+ K G+Y G +T +LD+L+
Sbjct: 19 MRVRKRNGTLEAADLNKIVRAISRCCDGL--RQVDAIRVATKTIAGLYDGASTQELDQLS 76
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTK----KSFSETIKDMYNHYNERSGLKAPLI 116
+TAA++T P+YA LAAR++ + + K SFS++I + R GL +
Sbjct: 77 IQTAASLTLEEPEYARLAARLLATYIDKELSGQEVHSFSQSIAAAH-----RLGL----V 127
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRV 174
+ V ++ NA +L+ I R+ ++YFG +T+ YLLK V+E PQH MR+
Sbjct: 128 NERVAQLVAANARKLNDSIDPTRNRLFEYFGLRTVYDRYLLKHPTTRAVLETPQHFFMRI 187
Query: 175 AVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
AV + + + A++ Y S + +SPTLFN+GT QLSSCFL+ +D + IY
Sbjct: 188 AVAL-GETVPEALELYRRFSLLEYVPSSPTLFNSGTRHEQLSSCFLLDSPEDELGSIYQR 246
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A++SK +GGIG++ H IR+ GS I TNG SNGIVP L+ + + V+QGG KRK
Sbjct: 247 YTDVAMLSKFSGGIGLAYHRIRSRGSLITSTNGHSNGIVPWLKTLDASVAAVNQGG-KRK 305
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA VYLE WHAD+ EFL+LR N G E R +L A WVPDLFM+RV+++G WSLF P
Sbjct: 306 GAACVYLETWHADLEEFLELRDNTGDEARRTHNLNLANWVPDLFMKRVEADGAWSLFDPK 365
Query: 355 EAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKK 414
P L D +G +FER Y + E +G A K ++A+ ++ ++++ +TG +M FKD N+
Sbjct: 366 VVPHLTDLYGEDFERAYLEAEAKGLAAKSIKAREMYARMMRTLAQTGNGWMTFKDKSNRA 425
Query: 415 SNQQNLG--TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGS 472
NQ + SNLCTE+++ TS ETAVCNL SI L R+ +
Sbjct: 426 CNQTARPGRVVHLSNLCTEILEVTSKDETAVCNLGSINLARHT---------------ST 470
Query: 473 RGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
FD+EKLA+ L+++ID+NYYP+ TA SN R RP+G+G+ GL D F
Sbjct: 471 DAQGKVTFDWEKLAQTVRTAVRQLDRVIDLNYYPIATAESSNQRWRPVGLGIMGLQDVFF 530
Query: 533 LLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGV 592
+ +PFD+ EA+ L++ + E IY+HAL S E+AA G + + + ++G LQ + WGV
Sbjct: 531 QMRLPFDAPEARTLSRKVSEEIYFHALSASVELAAEHGAHPAFPETRAAQGELQFEAWGV 590
Query: 593 NPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
P D W LR + + G+RNSLL+A PTA+ + I G EC EP SN++ R LSG+
Sbjct: 591 TPEDSARWEALRTRVKQTGLRNSLLIAIAPTATIASIAGCYECIEPQVSNLFKRETLSGD 650
Query: 653 FVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVD 712
F+ VN++L+ +L +G W+ ++ +I +GS+Q I +IP E++AIY+T WE+ ++L+D
Sbjct: 651 FLQVNRYLVEELKALGKWNEEMRTRIKLAEGSIQGISEIPAEVRAIYRTAWELPMRSLID 710
Query: 713 MAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
MA DRG +ID SQSLN+ M+ PN G+L+S++ +AW +GLKT YYLRSR A K TV
Sbjct: 711 MAADRGAFIDQSQSLNLFMESPNIGQLSSMYMYAWKKGLKT-TYYLRSRPATRIAKATV- 768
Query: 773 TSVLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
E P+ +A+ + CSL N E C AC
Sbjct: 769 -----EAPREEKPTEAQA--IACSLENPEACEAC 795
>gi|389794220|ref|ZP_10197378.1| ribonucleoside-diphosphate reductase subunit alpha [Rhodanobacter
fulvus Jip2]
gi|388432745|gb|EIL89734.1| ribonucleoside-diphosphate reductase subunit alpha [Rhodanobacter
fulvus Jip2]
Length = 816
Score = 635 bits (1638), Expect = e-179, Method: Compositional matrix adjust.
Identities = 341/815 (41%), Positives = 485/815 (59%), Gaps = 51/815 (6%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KR+G QEAV +KI + + + GL DP+ V+ K G+Y G TT +LD+L+
Sbjct: 43 MHVTKRNGGQEAVDVNKIVRAVTRSAEGL--HGVDPLRVALKTIGGLYDGATTQELDQLS 100
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTK----KSFSETIKDMYNHYNERSGLKAPLI 116
TAA++T P+Y LAAR++ + + K +SFS++I G + ++
Sbjct: 101 IRTAASLTAEEPEYGQLAARLLGAYIDKEVSGQEIQSFSQSIA---------RGAELGIL 151
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGK--VVERPQHMLMRV 174
D + D + NA +L+ I ++YFG +T+ YLL+ + V+E PQH MR+
Sbjct: 152 NDRLRDFVATNARKLNDAIDPLATRRFEYFGLRTVYDRYLLRHPQRRLVIETPQHFFMRI 211
Query: 175 AVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
A + ++I ++ Y ++S + +SPTLFNAGT QLSSC+L+ DS+E IYD
Sbjct: 212 ACALGGNEIGETLELYRLLSSLEYIASSPTLFNAGTCHEQLSSCYLLDSPVDSLESIYDK 271
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK AGGIG++ +R+ GS IRGTNG SNG++P L+ + + V+QGG KRK
Sbjct: 272 YADVAKLSKFAGGIGLAYSRVRSRGSLIRGTNGHSNGLLPWLKTLDASVAAVNQGG-KRK 330
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA VYLE WHADI +FL+LR N G + RA +L A W+PD FM RV+S+G WSLF P
Sbjct: 331 GAACVYLETWHADIEDFLELRDNTGDDARRAHNLNIANWIPDEFMRRVESDGDWSLFDPK 390
Query: 355 EAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKK 414
P D WG F+ Y K E +G K V+A+ L+ ++++ +TG +M FKD CN
Sbjct: 391 VVPHFVDSWGETFDAAYRKAEADGLGVKTVKARELYARMMRTLAQTGNGWMTFKDRCNAT 450
Query: 415 SNQQNL--GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGS 472
SNQ I SNLCTE+++ +S ETAVCNL S+ L R+V + GV
Sbjct: 451 SNQTAKLENVIHLSNLCTEILEVSSVNETAVCNLGSVNLSRHVVD-GV------------ 497
Query: 473 RGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
F++++LA LN++ID+NYYP+ TAR +N++ RP+G+GV GL D F
Sbjct: 498 -------FNYDQLAATVRTAVRQLNRVIDLNYYPIPTARTANMKWRPVGLGVMGLQDVFF 550
Query: 533 LLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMW-G 591
L +PFDSTEA L+ I E IY++AL S E+A EG + + S + LQ D W
Sbjct: 551 KLRLPFDSTEALALSTRIAEEIYFNALSQSCELAEGEGMHPGFAESRAANAELQFDYWPN 610
Query: 592 VNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSG 651
P + W LR+ I ++G+RNSLL+A PTA+ + I G EC EP SN++ R LSG
Sbjct: 611 TTPHNTARWDALREKIKQHGLRNSLLIAIAPTATIASIAGCYECIEPQVSNLFKRETLSG 670
Query: 652 EFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLV 711
+F+ VN++L +L +GLW+ I++ I +GS+Q I IPE L+AIY+TVWE+ QK L+
Sbjct: 671 DFLQVNRYLADELKALGLWTSEIRDAIKLAEGSIQNINAIPERLRAIYRTVWELPQKALI 730
Query: 712 DMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTV 771
++A RG YID SQSLN+ M+ PN G+L+S++ +AW G+KT YYLRSR A K TV
Sbjct: 731 ELAAARGAYIDQSQSLNLFMENPNIGQLSSMYMYAWKAGIKT-TYYLRSRPATKIAKTTV 789
Query: 772 DTSVLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
+ D A + CSL N E C AC
Sbjct: 790 SAA---------PDQAQATAAVFCSLENPEYCEAC 815
>gi|430741871|ref|YP_007201000.1| ribonucleoside-diphosphate reductase subunit alpha [Singulisphaera
acidiphila DSM 18658]
gi|430013591|gb|AGA25305.1| ribonucleoside-diphosphate reductase, alpha subunit [Singulisphaera
acidiphila DSM 18658]
Length = 801
Score = 635 bits (1637), Expect = e-179, Method: Compositional matrix adjust.
Identities = 335/814 (41%), Positives = 494/814 (60%), Gaps = 54/814 (6%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V KR+G+ E V +KI +++ S GL D + ++ K G++ G TT +LD+L+
Sbjct: 33 MHVRKRNGRLEPVDVNKIVRAVRRTSGGLP--SVDIMRIAVKTIGGLFDGATTRELDQLS 90
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLI 116
+TAA++ P+Y+ LAAR++ + K SFS+ + +G + LI
Sbjct: 91 IQTAASLIAEEPEYSQLAARLLDCYIAKEVMNQDIHSFSQAVS---------TGHRLGLI 141
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRV 174
A + + +A +L++ ++YFG +T+ YLL+ V+E P + +RV
Sbjct: 142 ATETAQQVAADARKLNAAAAASPRDKFEYFGLRTVYDRYLLRHPTTRDVIETPAYFFLRV 201
Query: 175 AVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
A G+ ++ +D A+ + +M+ + +SPTLFN+GTPR Q+SSC+L+ DS+E IYD
Sbjct: 202 ACGLSRNVVD-ALDLFELMASHRYMPSSPTLFNSGTPRPQMSSCYLLDSPADSLESIYDR 260
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK AGGIG++ H IR+ GSYI+GTNG NG+VP L+ + + V+QGG +RK
Sbjct: 261 YADIAKLSKYAGGIGLAYHRIRSRGSYIQGTNGHGNGVVPWLKTMDSSVAAVNQGG-RRK 319
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA VYLE WHADI EFL+L+ N G E R +L A WVPDLFM+RV++ WSLF P
Sbjct: 320 GACCVYLESWHADIEEFLELKDNAGDEARRTYNLNLANWVPDLFMQRVEAGANWSLFDPK 379
Query: 355 EAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKK 414
P L D +G F+ Y + E+ G A K V A++L+ ++K+ ETG ++ FKD CN+K
Sbjct: 380 TVPHLTDLFGEAFDVAYAEAEENGLAVKQVAARDLYARMMKTLAETGNGWLNFKDACNRK 439
Query: 415 SNQQNL--GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGS 472
SNQ + + SSNLCTE+++ TS ETAVCNL SI L ++V + G
Sbjct: 440 SNQTRVPGNVVHSSNLCTEIVEVTSAGETAVCNLGSINLVQHVDDDG------------- 486
Query: 473 RGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
FDFE LAE L+ ++D+N+YP + SN R RP+GIG+ GL D
Sbjct: 487 -------FDFEALAETVRTAVPFLDAVVDINFYPTPESATSNRRWRPVGIGLMGLQDVLF 539
Query: 533 LLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGV 592
L +PFD+ EA++L+ I E IY+HAL S ++A + GP+ ++ + ++G+LQ D+WG
Sbjct: 540 HLNLPFDAPEARRLSARIQEEIYFHALSVSCDLAEKLGPHPSFAETRAAEGVLQIDLWGW 599
Query: 593 NPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
W LRD I ++G+RNSLLVA PTA+ + I+G EC EP SN++ R LSGE
Sbjct: 600 EGGHDARWSDLRDRIRRHGLRNSLLVAIAPTATIASIVGAYECIEPQISNLFKRETLSGE 659
Query: 653 FVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVD 712
F+ VN++L+ +L GLW+ I+N+I +GS+Q I +IP EL+ +Y+TVWE+ ++L+D
Sbjct: 660 FLQVNRYLVKELKARGLWTEEIRNRIKLAEGSIQGIEEIPAELRRVYRTVWEVPMRSLID 719
Query: 713 MAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
MA DR +ID SQSLN+ ++ P+ GKL+S++ +AW RGLKT YYLRSR A K TV
Sbjct: 720 MAADRAPFIDQSQSLNLFIESPSIGKLSSMYMYAWKRGLKTS-YYLRSRPATGIAKTTVS 778
Query: 773 TSVLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
S P + +Q+ CSL N E C +C
Sbjct: 779 LS-----PGMP-------SQVACSLENPESCESC 800
>gi|238879998|gb|EEQ43636.1| ribonucleoside-diphosphate reductase large chain [Candida albicans
WO-1]
Length = 583
Score = 628 bits (1619), Expect = e-177, Method: Compositional matrix adjust.
Identities = 310/567 (54%), Positives = 394/567 (69%), Gaps = 20/567 (3%)
Query: 8 GKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAM 67
G++E KI L+++S+ L D ++ + V G+ +T +L AE A+
Sbjct: 9 GEEEDFDSVKIHKLLEEVSFNLGDLDLDQIV--ESVQRGLPSSLTIEELYTFIAEVIASR 66
Query: 68 TTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKN 127
HPDYA LA RI L+ SFSE ++ + + +S +P I+ Y ++ K+
Sbjct: 67 VIYHPDYAILAGRIETRKLYLKVPYSFSENVERLRKYRPRKSNSYSP-ISSAFYKVVKKH 125
Query: 128 AARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAI 187
LD I RD++ YFG KTLE SYLLK+ G+V E PQ++ MRVA+GIH++DI++
Sbjct: 126 GEFLDKVIDKTRDYNLTYFGIKTLESSYLLKIDGEVAELPQYLFMRVAIGIHQNDINAIA 185
Query: 188 KTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGG 247
+TY +MSQ++F HASPTL+NAG+ LSSCFLV MKDDSI+GI+ TL E A+ISK++GG
Sbjct: 186 ETYDLMSQKYFIHASPTLYNAGSEFNYLSSCFLVAMKDDSIDGIFKTLNEAALISKASGG 245
Query: 248 IGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHAD 307
IG+ VHNIR+ GSYI TNG SNG+VPMLRV+N+TARYVDQGGGKR GAFA+Y+EPWH D
Sbjct: 246 IGIHVHNIRSNGSYIASTNGNSNGLVPMLRVYNNTARYVDQGGGKRPGAFAIYIEPWHGD 305
Query: 308 IFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEF 367
IF+ L++RKNHG EE R RDLFY LW+PDLFM+RV+ N W+LF PNEA GL+D +G EF
Sbjct: 306 IFDILEMRKNHGNEEMRTRDLFYGLWIPDLFMKRVKENSDWTLFSPNEAVGLSDVYGEEF 365
Query: 368 ERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSN 427
E+LY KYE EG K V A LW IL SQ ETG PYML+KD CN KSNQ+N+GTIKSSN
Sbjct: 366 EKLYCKYESEGFGTK-VSAHKLWLAILHSQTETGGPYMLYKDACNTKSNQKNIGTIKSSN 424
Query: 428 LCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAE 487
LC E+++Y+SP ETAVCNLAS+ALP Y++ +G FDFEKL
Sbjct: 425 LCCEIVEYSSPKETAVCNLASLALPTYLKTT--------EDAIG--------FDFEKLHS 468
Query: 488 VTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLN 547
VT ++T NLN++IDV YPVETA SN RHRPI +GVQGLAD F L +PFDS A+ LN
Sbjct: 469 VTKVLTRNLNRVIDVTKYPVETAEYSNKRHRPIALGVQGLADLFAELRLPFDSAMAKTLN 528
Query: 548 KDIFETIYYHALRTSSEIAAREGPYET 574
IFETIY+ AL S E+A +EGPYET
Sbjct: 529 IQIFETIYHAALEASVELAMKEGPYET 555
>gi|357415821|ref|YP_004928841.1| ribonucleoside-diphosphate reductase subunit alpha
[Pseudoxanthomonas spadix BD-a59]
gi|355333399|gb|AER54800.1| ribonucleoside-diphosphate reductase, alpha subunit
[Pseudoxanthomonas spadix BD-a59]
Length = 807
Score = 627 bits (1618), Expect = e-177, Method: Compositional matrix adjust.
Identities = 339/817 (41%), Positives = 485/817 (59%), Gaps = 49/817 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V KR+G EAV +KI +++ + GL DP+ V+ + +G+Y G +T +LDEL+
Sbjct: 28 MRVKKRNGGSEAVDLNKIVRAVQRCADGL--HAVDPMRVATRTISGLYDGASTQELDELS 85
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTK----KSFSETIKDMYNHYNERSGLKAPLI 116
TAA + P+Y LAAR++ + + K +FS++I G + LI
Sbjct: 86 IRTAALLIGEEPEYGRLAARLLANCIAKEVAGQQIHAFSQSIS---------RGHEVGLI 136
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKV--QGKVVERPQHMLMRV 174
+ + + NA +L+ I + D +++YFG +TL YLL+ KV+E PQ +R+
Sbjct: 137 NARLLEFVQANARKLNDAIDLNLDREFEYFGLRTLYDRYLLRHPHTRKVIETPQQFFLRI 196
Query: 175 AVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
A + +++ A+ Y M++ + +SPTLFNAGT QLSSCFL+ DS+E IY
Sbjct: 197 ASAL-SEEVPEALALYQRMARLDYLPSSPTLFNAGTTHEQLSSCFLLDSPQDSLESIYAR 255
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK +GGIGVS +RA GS I TNG SNGIVP L+ + + V+QGG KRK
Sbjct: 256 YGDIAQLSKFSGGIGVSYSRVRARGSLISSTNGHSNGIVPWLKTLDSSVAAVNQGG-KRK 314
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA VYLE WHAD+ +FL+LR N G + R +L A WVPDLFM+RV+++ WSLF P
Sbjct: 315 GAACVYLETWHADLEDFLELRDNAGDDARRTHNLNLANWVPDLFMQRVEADAPWSLFDPK 374
Query: 355 EAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKK 414
P L D +G FE Y + E +GKA K + A+ L+ ++++ ETG +M FKD CN
Sbjct: 375 TTPELPDLYGEAFEHAYLQAEAQGKATKTIAARKLYARMMRTLAETGNGWMTFKDKCNLA 434
Query: 415 SNQ--QNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGS 472
SNQ + I SNLCTE+++ TS ETAVCNL SI L G
Sbjct: 435 SNQTLRAGNVIHLSNLCTEILEVTSSDETAVCNLGSINL-------------------GR 475
Query: 473 RGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
+ FDF+KLA+ + L+++ID+N+YP++TARR NLR RP+G+G GL D F
Sbjct: 476 HFDDHGDFDFDKLAQTVRLAVHQLDRVIDLNFYPIQTARRGNLRWRPVGLGCMGLQDVFF 535
Query: 533 LLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGV 592
+ FDS +A+ L+ I ETIY+HAL TS E+A + G + ++ + + G LQ D W V
Sbjct: 536 KKRLAFDSAQARALSNKIAETIYFHALETSCELAQQRGRHPSFADTRAASGALQFDAWNV 595
Query: 593 NPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
P D W LR I ++G+RNSLL+A PTA+ + I G EC EP SN++ R LSG+
Sbjct: 596 TPEDTARWDALRARIRQHGLRNSLLIAIAPTATIASIAGCYECVEPQLSNLFKRETLSGD 655
Query: 653 FVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVD 712
F+ VN++L+ +L ++GLW+ +++ I +GS+Q I QIP+ L+ IY+T WEI ++L+D
Sbjct: 656 FLQVNRYLVDELKKLGLWTAQMRDAIKLAEGSIQGIAQIPQTLRQIYRTAWEIPMRSLID 715
Query: 713 MAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
MA RG +ID S SLN+ M+ PN G L+S++ +AW +GLKT YYLRSR A K T+
Sbjct: 716 MAAGRGAFIDQSASLNLFMESPNIGALSSMYMYAWKQGLKT-TYYLRSRPATRIAKATLS 774
Query: 773 ---TSVLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
+ P T D+ + CSL N E C AC
Sbjct: 775 HDASQAPAPKPAFTPDE-----AVSCSLENPEGCEAC 806
>gi|67598375|ref|XP_666214.1| ribonucleoside-diphosphate reductase large chain (ribonucleotide
reductase R1 subunit) [Cryptosporidium hominis TU502]
gi|54657163|gb|EAL35983.1| ribonucleoside-diphosphate reductase large chain (ribonucleotide
reductase R1 subunit) [Cryptosporidium hominis]
Length = 526
Score = 625 bits (1612), Expect = e-176, Method: Compositional matrix adjust.
Identities = 307/531 (57%), Positives = 386/531 (72%), Gaps = 33/531 (6%)
Query: 291 GKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSL 350
G K A+YLEPWH D+ EF+++RKNHGKEE R RDLF ALWVPDLFMERV+ + W+L
Sbjct: 12 GSVKVPIAIYLEPWHVDVVEFIEIRKNHGKEEMRCRDLFPALWVPDLFMERVEKDQDWTL 71
Query: 351 FCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDT 410
CP+E GL D WG +F++LY +YEK+G+ +K ++AQ LWF IL++QIETGTP++ +KD
Sbjct: 72 MCPDECRGLQDVWGDDFKKLYEEYEKQGRGRKTMKAQKLWFLILQAQIETGTPFICYKDA 131
Query: 411 CNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLV 470
N KSNQ+NLGTI SSNLCTE+I+YTS E AVCNLASI LP++V +
Sbjct: 132 ANSKSNQKNLGTIVSSNLCTEIIEYTSKDEVAVCNLASIGLPKFVDK------------- 178
Query: 471 GSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADT 530
N+ FDF+KL EVT ++T NLNK+IDV YY ++ + SNLRHRP+GIG+QGLAD
Sbjct: 179 -----NNKTFDFDKLKEVTKVITRNLNKLIDVGYYSLKECKNSNLRHRPLGIGIQGLADC 233
Query: 531 FILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMW 590
F++L MP++S A++LNK IFE IYY AL S E+A + GPYETY GSP SKGILQ DMW
Sbjct: 234 FMMLRMPYESEGAKKLNKQIFEVIYYAALDASCELAEKYGPYETYSGSPASKGILQFDMW 293
Query: 591 GVNP-SDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL 649
GV P S DW L+D ISK G+RNSLL++PMPTASTSQILGNNE FEP+TSNIY RRVL
Sbjct: 294 GVTPDSGLCDWDSLKDRISKYGIRNSLLISPMPTASTSQILGNNESFEPFTSNIYHRRVL 353
Query: 650 SGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKT 709
SGEF VVN HLL+DL E+GLW +K II ++GS+Q I IPE+++ +YKTVWEIKQKT
Sbjct: 354 SGEFFVVNPHLLNDLLELGLWDDRLKQNIIANNGSIQNILTIPEDIRELYKTVWEIKQKT 413
Query: 710 LVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKF 769
++DMA DRG Y+ SQSLNIHM+ NF KL+S+HF+ W +GLKTG+YYLR+++A I+F
Sbjct: 414 VIDMAADRGPYVCQSQSLNIHMENANFAKLSSMHFYGWKKGLKTGIYYLRTQSATRPIQF 473
Query: 770 TVDTSVLKENPKVTDDDDAKMAQ---------MVCSL-----TNREECMAC 806
TVD +LK K D + Q + C L + EECM C
Sbjct: 474 TVDQQLLKSETKEKDSLETNKRQALEPETQKLIACPLRPTNMKDDEECMMC 524
>gi|383315472|ref|YP_005376314.1| ribonucleoside-diphosphate reductase subunit alpha [Frateuria
aurantia DSM 6220]
gi|379042576|gb|AFC84632.1| ribonucleoside-diphosphate reductase, alpha subunit [Frateuria
aurantia DSM 6220]
Length = 816
Score = 619 bits (1597), Expect = e-174, Method: Compositional matrix adjust.
Identities = 341/818 (41%), Positives = 484/818 (59%), Gaps = 45/818 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M + KR G E V +KI + + + GL DP+ V+ K G+Y G TT +LD+L+
Sbjct: 31 MRITKRSGVTELVDVNKIVKAVTRSADGL--HAVDPMRVALKTIGGLYDGATTKELDQLS 88
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTK----KSFSETIKDMYNHYNERSGLKAPLI 116
TAAA+T+ P+Y LAAR++ + + K +SFS+++ G++ ++
Sbjct: 89 IRTAAALTSEEPEYGQLAARLLGAFIDKEVSGQEIQSFSQSVA---------RGVELGIL 139
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLK-VQGKVV-ERPQHMLMRV 174
D + D + +A +L+ I D ++YFG +T+ YLL+ Q ++V E P + MR+
Sbjct: 140 NDRLRDFVALHARKLNDAIDLDTTRRFEYFGLRTVYDRYLLRHPQSRLVLETPTYFFMRI 199
Query: 175 AVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
A + DI ++ Y ++S + +SPTLFNAGT QLSSCFL+ DS+E IYD
Sbjct: 200 ACALGGGDIGETLELYRLLSSLEYLASSPTLFNAGTTHEQLSSCFLLDSPTDSLESIYDK 259
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK AGGIG++ +R+ GS IRGTNG SNG+VP L+ + + V+QGG KRK
Sbjct: 260 YADVAKLSKFAGGIGLAYSRVRSRGSLIRGTNGHSNGLVPWLKTLDASVAAVNQGG-KRK 318
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA VYLE WHADI EFL+LR N G E R +L A WVPD FM RV+++G WSLF P
Sbjct: 319 GAACVYLETWHADIEEFLELRDNTGDHERRTHNLNLANWVPDEFMRRVETDGNWSLFDPK 378
Query: 355 EAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKK 414
P D WG FE Y K E EG A K V+A++L+ +L++ +TG +M FKD N
Sbjct: 379 IVPHFVDTWGETFEAAYRKAEAEGLAVKTVKARDLYARMLRTLAQTGNGWMTFKDRANAT 438
Query: 415 SNQ--QNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGS 472
SNQ + I SNLCTE+++ T+ ETAVCNL S+ L R+V++ GV
Sbjct: 439 SNQTARPENVIHLSNLCTEILEVTNAQETAVCNLGSVNLSRHVQD-GV------------ 485
Query: 473 RGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
F+FE+L LN++ID+N+YP++TA +N + RP+G+G+ GL D F
Sbjct: 486 -------FNFEQLGTTVRTAVRQLNRVIDLNFYPIDTAAVANRKWRPVGLGLMGLQDVFF 538
Query: 533 LLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMW-G 591
L + FDS EA L+ I E IYYHAL S EIA ++G + + + + G LQ D W
Sbjct: 539 KLRLAFDSPEALDLSSRISEEIYYHALAQSCEIAEQDGAHPGFPETRAANGELQFDYWPK 598
Query: 592 VNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSG 651
+ +D W LR+ I ++G+RNSLL+A PTA+ + I G EC EP SN++ R LSG
Sbjct: 599 ASQADTARWDALREKIKQHGLRNSLLIAIAPTATIASIAGCYECIEPQVSNLFKRETLSG 658
Query: 652 EFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLV 711
+F+VVN++L ++L +GLW+ I+++I +GS+Q I IPE L+ IY+T WE+ QK L+
Sbjct: 659 DFLVVNRYLSNELKALGLWTAEIRDQIKLAEGSIQGIMAIPERLRLIYRTTWELPQKALI 718
Query: 712 DMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTV 771
++A R YID SQSLN+ M+ PN G+L+S++ +AW GLKT YYLRSR A K TV
Sbjct: 719 ELAAARSAYIDQSQSLNLFMENPNIGQLSSMYMYAWKSGLKT-TYYLRSRPATKIAKTTV 777
Query: 772 DTSVLKE---NPKVTDDDDAKMAQMVCSLTNREECMAC 806
+ D A + CSL N E C AC
Sbjct: 778 GMGGQNQAPVPAAPAADQQQAEAAVFCSLENPEYCEAC 815
>gi|194377960|dbj|BAG63343.1| unnamed protein product [Homo sapiens]
Length = 454
Score = 618 bits (1593), Expect = e-174, Method: Compositional matrix adjust.
Identities = 296/473 (62%), Positives = 364/473 (76%), Gaps = 22/473 (4%)
Query: 339 MERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQI 398
M+RV++N WSL CPNE PGL + WG EFE+LY YEK+G+ +KVV+AQ LW+ I++SQ
Sbjct: 1 MKRVETNQDWSLMCPNECPGLDEVWGEEFEKLYASYEKQGRVRKVVKAQQLWYAIIESQT 60
Query: 399 ETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREM 458
ETGTPYML+KD+CN+KSNQQNLGTIK SNLCTE+++YTS E AVCNLAS+AL YV
Sbjct: 61 ETGTPYMLYKDSCNRKSNQQNLGTIKCSNLCTEIVEYTSKDEVAVCNLASLALNMYV--- 117
Query: 459 GVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHR 518
+ +DF+KLAEVT +V NLNKIID+NYYPV A SN RHR
Sbjct: 118 ----------------TSEHTYDFKKLAEVTKVVVRNLNKIIDINYYPVPEACLSNKRHR 161
Query: 519 PIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGS 578
PIGIGVQGLAD FIL+ PF+S EAQ LNK IFETIYY AL S ++A +GPYETY GS
Sbjct: 162 PIGIGVQGLADAFILMRYPFESAEAQLLNKQIFETIYYGALEASCDLAKEQGPYETYEGS 221
Query: 579 PVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
PVSKGILQ DMW V P+D WDW L++ I+K G+RNSLL+APMPTAST+QILGNNE EP
Sbjct: 222 PVSKGILQYDMWNVTPTDLWDWKVLKEKIAKYGIRNSLLIAPMPTASTAQILGNNESIEP 281
Query: 639 YTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAI 698
YTSNIY+RRVLSGEF +VN HLL DLTE GLW +KN+II +GS+Q IP+IP++LK +
Sbjct: 282 YTSNIYTRRVLSGEFQIVNPHLLKDLTERGLWHEEMKNQIIACNGSIQSIPEIPDDLKQL 341
Query: 699 YKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYL 758
YKTVWEI QKT++ MA +RG +ID SQSLNIH+ +PN+GKLTS+HF+ W +GLKTGMYYL
Sbjct: 342 YKTVWEISQKTVLKMAAERGAFIDQSQSLNIHIAEPNYGKLTSMHFYGWKQGLKTGMYYL 401
Query: 759 RSRAAADAIKFTVDTSVLKENPKVTDDDDA---KMAQMVCSLTNREECMACGS 808
R+R AA+ I+FT++ LK+ KV+ +++ A MVCSL NR+EC+ CGS
Sbjct: 402 RTRPAANPIQFTLNKERLKDKEKVSKEEEEKERNTAAMVCSLENRDECLMCGS 454
>gi|330467633|ref|YP_004405376.1| ribonucleoside-diphosphate reductase subunit alpha [Verrucosispora
maris AB-18-032]
gi|328810604|gb|AEB44776.1| ribonucleoside-diphosphate reductase, alpha subunit [Verrucosispora
maris AB-18-032]
Length = 791
Score = 616 bits (1589), Expect = e-173, Method: Compositional matrix adjust.
Identities = 331/814 (40%), Positives = 485/814 (59%), Gaps = 48/814 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V KR+G E V +KI +++ + ++ DP+ V+ K +G+Y G TT++LD+L+
Sbjct: 17 MQVRKRNGDTEPVDVNKIVKAVER--WVTDLDEIDPLRVATKTISGLYDGATTAELDKLS 74
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTK----KSFSETIKDMYNHYNERSGLKAPLI 116
+TAA + P Y+ LAAR++ + + K + SFS++I+ Y H GL LI
Sbjct: 75 IQTAAELIGEEPQYSRLAARLLAAFVDKEVRGQQVASFSQSIR--YAH-----GLG--LI 125
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRV 174
D + +NA +LD + D ++YFG +T+ YLL+ +VVE PQ+ L+RV
Sbjct: 126 GDATAAFVARNARKLDDAVDPAGDLRFEYFGLRTVADRYLLRHPQTRQVVETPQYWLLRV 185
Query: 175 AVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
A G+ + AI Y +MS + +SPTLFN+GT Q+SSCFLV D ++ IY+
Sbjct: 186 ACGLSQTP-GEAIGFYRLMSSLAYLPSSPTLFNSGTRHTQMSSCFLVDSPRDELDSIYER 244
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK +GGIG+S +R G+ IRGTNG SNGIVP L+ + V+QGG +RK
Sbjct: 245 YHQVAKLSKFSGGIGISWTRVRGRGALIRGTNGRSNGIVPFLKTLDAGVAAVNQGG-RRK 303
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA VYLEPWH DI EFL+LR N G+E R +L A W+PD FM RV+++G WSL P+
Sbjct: 304 GAACVYLEPWHPDIEEFLELRDNTGEESRRTHNLNLANWIPDEFMRRVEADGDWSLIDPS 363
Query: 355 EAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKK 414
+AP L D +G F+ Y EK KA + V+A++L+ ++++ +TG +M FKD N+
Sbjct: 364 DAPELPDLYGEAFDEAYRAAEK--KAVRTVKARDLYGRMMRTLAQTGNGWMTFKDAANRL 421
Query: 415 SNQQNL--GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGS 472
SNQ TI SNLCTE+++ + TETAVCNL SI L ++ G+
Sbjct: 422 SNQTGAPGNTIHLSNLCTEILEVNNDTETAVCNLGSINLAAHLTADGI------------ 469
Query: 473 RGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
D+EKL L+++ID+NYYP + A SN R RP+G+G+ GL D F
Sbjct: 470 --------DWEKLRATVRTAVLFLDRVIDINYYPAQQAAASNPRWRPVGLGLMGLQDAFF 521
Query: 533 LLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGV 592
L MPFDST A++L+ + E I AL TS+++A + GP+ Y + ++G L PD+WG
Sbjct: 522 TLRMPFDSTPARELSSRVQEEILLTALETSAQLAQQFGPHPAYDDTRAARGELHPDLWGA 581
Query: 593 NPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
+ + W LR+ I+ +G+RNSLLVA PTA+ + I G EC EP SN++ R +SGE
Sbjct: 582 DLTQAQRWAALRETIAAHGLRNSLLVAIAPTATIASIAGCYECIEPQVSNLFKRETMSGE 641
Query: 653 FVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVD 712
F+ +N +L+ +L GLW+ I+ +I +GSVQ I ++PE+++ +++T WE+ Q+ L+D
Sbjct: 642 FLQINTYLVRELKARGLWTASIREQIKRAEGSVQGIAELPEDVRQLFRTAWELPQRALID 701
Query: 713 MAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
+A R +ID SQSLN+ + P GKL+S++ +AW GLKT YYLRSR A + TV
Sbjct: 702 LAAARAPFIDQSQSLNLFISAPTIGKLSSMYLYAWKSGLKT-TYYLRSRPATRIQQATVA 760
Query: 773 TSVLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
+ DD+A + CSL N E C AC
Sbjct: 761 VTPAAPAIVAVGDDEA----LACSLENPESCEAC 790
>gi|159040365|ref|YP_001539618.1| ribonucleoside-diphosphate reductase subunit alpha [Salinispora
arenicola CNS-205]
gi|157919200|gb|ABW00628.1| ribonucleoside-diphosphate reductase, alpha subunit [Salinispora
arenicola CNS-205]
Length = 821
Score = 613 bits (1580), Expect = e-172, Method: Compositional matrix adjust.
Identities = 339/836 (40%), Positives = 489/836 (58%), Gaps = 67/836 (8%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V KR+G E V +KI +++ + ++ DP+ V+ K +G+Y G TT++LD L+
Sbjct: 22 MEVRKRNGDTEPVDVNKIVKAVER--WVADLDEVDPLRVATKTISGLYDGATTAELDRLS 79
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTK----KSFSETIKDMYNHYNERSGLKAPLI 116
+TAA + P Y+ LAAR++ + + K + SFS++I+ Y H GL LI
Sbjct: 80 IQTAAELIGEEPQYSKLAARLLAAYVDKEVRGQQVASFSQSIR--YAH-----GLG--LI 130
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLK-VQGK-VVERPQHMLMRV 174
+DD + +NA +LD + D ++YFG +T+ YLL+ Q + VVE PQ+ L+RV
Sbjct: 131 SDDTAAFVSRNARKLDDAVDPAGDLRFEYFGLRTVADRYLLRHPQSRLVVETPQYWLLRV 190
Query: 175 AVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
A G+ + + AI Y +MS + +SPTLFN+GT Q+SSCFLV D ++ IY
Sbjct: 191 ACGMSRTPAE-AIGFYQLMSSLAYLPSSPTLFNSGTRHTQMSSCFLVDSPRDELDSIYQR 249
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK +GGIG+S +R G+ IRGTNG SNGIVP L+ + V+QGG +RK
Sbjct: 250 YHQVAKLSKFSGGIGISWSRVRGRGALIRGTNGRSNGIVPFLKTLDAGVAAVNQGG-RRK 308
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA VYLEPWH DI EFL+LR N G++ R +L A W+PD FM RV+++G WSL P+
Sbjct: 309 GAACVYLEPWHPDIEEFLELRDNTGEDARRTHNLNLANWLPDEFMRRVEADGDWSLIDPS 368
Query: 355 EAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKK 414
+AP L D +G EF+ Y EK KA + V+A++L+ ++++ +TG +M FKD N
Sbjct: 369 DAPELPDLYGDEFDAAYRVAEK--KAVRTVKARDLYGRMMRTLAQTGNGWMTFKDRSNTL 426
Query: 415 SNQ--QNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGS 472
SNQ Q TI SNLCTE+++ + TETAVCNL S+ L +V GV
Sbjct: 427 SNQTGQPANTIHLSNLCTEILEVNNDTETAVCNLGSVNLGAHVTVDGV------------ 474
Query: 473 RGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
D+EKL L+++ID+NYYP E A SN R RP+G+G+ GL D F
Sbjct: 475 --------DWEKLRATVRTAVVFLDRVIDINYYPAEQAAASNPRWRPVGLGLMGLQDAFF 526
Query: 533 LLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGV 592
L +PFDS EA +L+ + E I+ AL TS+ +A R GP+ Y + ++G L PD+WG
Sbjct: 527 TLRLPFDSAEASELSTRVQEEIFLTALETSAGLAERFGPHPAYAETRAARGDLHPDLWGA 586
Query: 593 NPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
P+ W GL+ I+++G+RNSLLVA PTA+ + I G EC EP SN++ R +SGE
Sbjct: 587 TPTQTRRWAGLKARIAEHGLRNSLLVAIAPTATIASIAGCYECIEPQVSNLFKRETMSGE 646
Query: 653 FVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVD 712
F+ VN +L+ +L GLW+ I+++I +GSVQ + ++P E++ +++T WE+ Q+ L+D
Sbjct: 647 FLQVNTYLVGELKARGLWTAQIRDQIRRAEGSVQGLGELPAEVRELFRTAWELPQRALID 706
Query: 713 MAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
+A R YID SQSLN+ + P GKL+S++ +AW GLKT YYLRSR A + TV
Sbjct: 707 LAAARAPYIDQSQSLNLFLAAPTIGKLSSMYLYAWKSGLKT-TYYLRSRPATRIQQATVA 765
Query: 773 TSVLKENPKVTDDDDAK----------------------MAQMVCSLTNREECMAC 806
+ P V D A+ + CSL N E C AC
Sbjct: 766 VTPTVP-PGVADASSAQPGVAPGLSGAAASSASGVAGTDAEALACSLENPESCEAC 820
>gi|238061573|ref|ZP_04606282.1| ribonucleoside-diphosphate reductase, alpha subunit [Micromonospora
sp. ATCC 39149]
gi|237883384|gb|EEP72212.1| ribonucleoside-diphosphate reductase, alpha subunit [Micromonospora
sp. ATCC 39149]
Length = 792
Score = 612 bits (1579), Expect = e-172, Method: Compositional matrix adjust.
Identities = 332/808 (41%), Positives = 482/808 (59%), Gaps = 52/808 (6%)
Query: 7 DGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAA 66
+G E V +KI +++ + ++ DP+ V+ K +G+Y G TT++LD+L+ +TAA
Sbjct: 28 NGDAEPVDVNKIVKAVER--WVADLDEVDPLRVATKTISGLYDGATTAELDKLSIQTAAE 85
Query: 67 MTTNHPDYASLAARIVVSNLHKNTK----KSFSETIKDMYNHYNERSGLKAPLIADDVYD 122
+ + P Y+ LAAR++ + + K + SFS++++ Y H GL LI DD
Sbjct: 86 LISEEPQYSKLAARLLAAYVDKEVRGQQVASFSQSVR--YAH-----GLG--LIGDDTAA 136
Query: 123 IIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGK--VVERPQHMLMRVAVGIHK 180
+ +NA +LD + D ++YFG +T+ YLL+ VVE PQ+ L+RVA G+ +
Sbjct: 137 FVARNARKLDDAVDPAGDLRFEYFGLRTVADRYLLRQPESRLVVETPQYWLLRVACGLSE 196
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+ AI Y +MS + +SPTLFN+GT Q+SSCFLV D ++ IY+ + A
Sbjct: 197 TPAE-AIGFYRLMSSLAYLPSSPTLFNSGTRHTQMSSCFLVDSPRDELDSIYERYHQVAK 255
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
+SK +GGIG++ +R G+ IRGTNG SNGIVP L+ + V+QGG +RKGA VY
Sbjct: 256 LSKFSGGIGIAWSRVRGRGALIRGTNGRSNGIVPFLKTLDAGVAAVNQGG-RRKGAACVY 314
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH DI EFL+LR N G+E R +L A W+PD FM RV+++G WSL P++AP L
Sbjct: 315 LEPWHPDIEEFLELRDNTGEESRRTHNLNLANWIPDEFMRRVEADGDWSLIDPSDAPELP 374
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D +G EF+ Y EK KA + V+A++L+ ++++ +TG +M FKD N+ SNQ +
Sbjct: 375 DLYGEEFDAAYRIAEK--KAIRTVKARDLYGRMMRTLAQTGNGWMTFKDPSNRLSNQTGV 432
Query: 421 --GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNR 478
TI SNLCTE+++ S TETAVCNL SI L +V GV
Sbjct: 433 PGNTIHLSNLCTEILEVNSDTETAVCNLGSINLGAHVTVDGV------------------ 474
Query: 479 YFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPF 538
D+ KL L+++ID+NYYP A SN R RP+G+G+ GL D F L +PF
Sbjct: 475 --DWVKLRSTVRTAVVFLDRVIDINYYPATQAAASNPRWRPVGLGLMGLQDAFFTLRLPF 532
Query: 539 DSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRW 598
DS A++L+ + E I+ AL TS+ ++ R GP+ Y + ++G L PD+WGV P+
Sbjct: 533 DSAAARELSTRVQEEIFLTALETSAGLSERFGPHPAYAETRAARGELHPDLWGVEPTQTE 592
Query: 599 DWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNK 658
W LR I+ +G+RNSLLVA PTA+ + I G EC EP SN++ R +SGEF+ +N
Sbjct: 593 RWAALRATIAAHGLRNSLLVAIAPTATIASIAGCYECIEPQVSNLFKRETMSGEFLQINT 652
Query: 659 HLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRG 718
+L+ +L GLW+P I+++I +GSVQ I +P +++ +++T WE+ Q+TL+D+A R
Sbjct: 653 YLVRELKAHGLWTPQIRDQIKRAEGSVQGIDDLPADVRELFRTAWELPQRTLIDLAAARA 712
Query: 719 CYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE 778
YID SQSLN+ + P GKL+S++ +AW GLKT YYLRSR A + TV
Sbjct: 713 PYIDQSQSLNLFLSAPTIGKLSSMYLYAWKSGLKT-TYYLRSRPATRIQQATVAV----- 766
Query: 779 NPKVTDDDDAKMAQMVCSLTNREECMAC 806
P V D +A CSL N E C AC
Sbjct: 767 KPVVAVSDTEALA---CSLENPESCEAC 791
>gi|117928931|ref|YP_873482.1| ribonucleoside-diphosphate reductase subunit alpha [Acidothermus
cellulolyticus 11B]
gi|117649394|gb|ABK53496.1| ribonucleoside-diphosphate reductase, alpha subunit [Acidothermus
cellulolyticus 11B]
Length = 781
Score = 611 bits (1576), Expect = e-172, Method: Compositional matrix adjust.
Identities = 327/814 (40%), Positives = 475/814 (58%), Gaps = 42/814 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V KR+G E V +KI +++ + L+ DP+ V+ K +G+Y G TT++LD L+
Sbjct: 1 MRVRKRNGDTEPVDVNKIVRAVERWADDLT--DVDPLRVATKTISGLYDGATTAELDRLS 58
Query: 61 AETAAAMTTNHPDYASLAARIVVS----NLHKNTKKSFSETIKDMYNHYNERSGLKAPLI 116
+TAA + P Y+ LAAR++ + +H SFS++I G LI
Sbjct: 59 IQTAAELIAEEPQYSKLAARLLAAYIEKEVHNQGIASFSQSIA---------LGHAEGLI 109
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRV 174
D+ + NA + D I D ++YFG +T+ YLL+ V+E PQ+ L+RV
Sbjct: 110 GDETARFVKDNARKFDFAIDPKGDQRFEYFGLRTVYDRYLLRHPTSRLVIETPQYFLLRV 169
Query: 175 AVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
A G+ + + AI+ Y +MS+ + +S TLFN+GT Q+SSC+LV D ++ IY
Sbjct: 170 ACGLARTPAE-AIEFYRLMSELAYLPSSATLFNSGTRHPQMSSCYLVDSPRDELDSIYAR 228
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK AGGIG+ +R+ G+ IRGTNG SNGIVP L+ + + V+QGG +RK
Sbjct: 229 YHQVARLSKFAGGIGIGFSRVRSRGALIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRK 287
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA VYLEPWH DI EFL+LR N G++ R +L A W+PD FM RV+++ LWSL P+
Sbjct: 288 GAACVYLEPWHPDIEEFLELRDNTGEDARRTYNLNLANWIPDEFMRRVEADELWSLIDPD 347
Query: 355 EAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKK 414
+AP L D WG +F+ Y + E EG+ + V+A++L+ +++++ ETG +M FKD CN K
Sbjct: 348 QAPELVDLWGADFDAAYRRAEAEGRYVRQVRARDLYAKMMRTLAETGNGWMTFKDACNAK 407
Query: 415 SNQQNL--GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGS 472
NQ + SNLCTE+++ E AVCNL SI L R+VR+ V
Sbjct: 408 CNQTGRPGNVVHLSNLCTEIVEVNRDDEIAVCNLGSINLARHVRDGAV------------ 455
Query: 473 RGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
D+++L I L++++D+N+YP A RSN + RPIG+GV GL D F
Sbjct: 456 --------DWDRLRRTVQIAVPLLDRVVDINFYPTPEAARSNEKWRPIGLGVMGLQDVFF 507
Query: 533 LLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGV 592
L +PFDS EA +L+ I E IY AL S+E+AA GP+ + + + G LQPD+WGV
Sbjct: 508 ALRLPFDSGEALELSTRIAEEIYLTALEVSAELAAEYGPHPAFPETRAAAGYLQPDLWGV 567
Query: 593 NPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
P+ + + +++ I+ G+RNSLL+A PTA+ + I G E EP SN++ R LSGE
Sbjct: 568 TPTQQERYAAIKERIAAVGLRNSLLIAIAPTATIASIAGCYESIEPMVSNLFKRETLSGE 627
Query: 653 FVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVD 712
F+ VN L+++L GLW+ I+ I DGSVQ + +PEE++ +++T WE+ QK L+D
Sbjct: 628 FLQVNTALVNELKTRGLWTKEIREAIKRADGSVQGLTVLPEEVRRVFRTAWELPQKALID 687
Query: 713 MAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
+A RG YID SQSLN+ M P KL+S++ +AW GLKT YYLRSR A + TV
Sbjct: 688 LAAARGPYIDQSQSLNLFMAAPTISKLSSMYRYAWASGLKT-TYYLRSRPATRIQQATVT 746
Query: 773 TSVLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
+ + V + CSL N E C C
Sbjct: 747 VTSSDDVRDVMANPSTSKPATSCSLENPETCEVC 780
>gi|302867101|ref|YP_003835738.1| ribonucleoside-diphosphate reductase subunit alpha [Micromonospora
aurantiaca ATCC 27029]
gi|302569960|gb|ADL46162.1| ribonucleoside-diphosphate reductase, alpha subunit [Micromonospora
aurantiaca ATCC 27029]
Length = 798
Score = 611 bits (1576), Expect = e-172, Method: Compositional matrix adjust.
Identities = 331/816 (40%), Positives = 484/816 (59%), Gaps = 50/816 (6%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V KRDG E V KI +++ + ++ DP+ V+ K +G+Y G TT++LD L+
Sbjct: 22 MRVRKRDGDTEPVDVGKIVRAVER--WVADLDEVDPLRVATKTISGLYDGATTAELDRLS 79
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTK----KSFSETIKDMYNHYNERSGLKAPLI 116
+TAA + P Y+ LAAR++ + + K + SFS++I Y H GL LI
Sbjct: 80 IQTAAELIGEEPQYSKLAARLLAAYVDKEVRGQGVASFSQSIA--YAH-----GLG--LI 130
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLK-VQGK-VVERPQHMLMRV 174
D+ + ++A +LD + D D ++YFG +T+ YLL+ Q + VVE PQ+ L+RV
Sbjct: 131 GDETAGFVARHARKLDDAVDPDGDLRFEYFGLRTVADRYLLRHPQSRLVVETPQYWLLRV 190
Query: 175 AVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
A G+ + A+ Y +MS + +SPTLFN+GT Q+SSCFLV D ++ IY+
Sbjct: 191 ACGLSRTP-GEAVGFYRLMSSLAYLPSSPTLFNSGTRHTQMSSCFLVDSPRDELDSIYER 249
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK +GGIG+S +R G+ IRGTNG SNGIVP L+ + V+QGG +RK
Sbjct: 250 YHQVAKLSKFSGGIGISWSRVRGRGALIRGTNGRSNGIVPFLKTLDAGVAAVNQGG-RRK 308
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA VYLEPWH D+ EFL+LR N G+E R +L A W+PD FM RV+++G WSL P+
Sbjct: 309 GAACVYLEPWHPDVEEFLELRDNTGEESRRTHNLNLANWIPDEFMRRVEADGEWSLVDPS 368
Query: 355 EAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKK 414
+AP L D +G F+ Y EK A + V+A++L+ ++++ +TG +M FKD N+
Sbjct: 369 DAPELPDLYGEAFDAAYRAAEK--NAVRTVRARDLYGRMMRTLAQTGNGWMTFKDAANRL 426
Query: 415 SNQ--QNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGS 472
SNQ + I SNLCTE+++ ETAVCNL S+ L +V GV
Sbjct: 427 SNQTGEPGNVIHLSNLCTEILEVNDDAETAVCNLGSVNLGAHVTADGV------------ 474
Query: 473 RGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
D+E+L L+++ID+NYYP E A SN R RP+G+G+ GL D F
Sbjct: 475 --------DWERLRATVRTAVVFLDRVIDINYYPAEQAAASNPRWRPVGLGLMGLQDAFF 526
Query: 533 LLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGV 592
L +PFDS +A++L+ + E I AL TS+ +A R GP+ Y + +KG L PD+WG
Sbjct: 527 TLRLPFDSAQAKELSTRVQEEILLTALETSAGLAERFGPHPAYPQTRAAKGDLHPDLWGA 586
Query: 593 NPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
P+ W LR+ I+ +G+RNSLLVA PTA+ + I G EC EP SN++ R +SGE
Sbjct: 587 EPAQAGRWAALRERIAVHGLRNSLLVAIAPTATIASIAGCYECVEPQVSNLFKRETMSGE 646
Query: 653 FVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVD 712
F+ VN +L+ +L GLW+P ++++I +GSVQ I ++P ++ +++T WE+ Q+ L+D
Sbjct: 647 FLQVNTYLVRELKARGLWTPQVRDRIKRAEGSVQDITELPAPVRELFRTAWELPQRALID 706
Query: 713 MAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
+A R +ID SQSLN+ + P GKL+S++ +AW GLKT YYLRSR A + TV
Sbjct: 707 LAAARAPFIDQSQSLNLFLSAPTIGKLSSMYLYAWKAGLKT-TYYLRSRPATRIQQATVA 765
Query: 773 TSVLKENPKVT--DDDDAKMAQMVCSLTNREECMAC 806
+ + V+ DD+A + CSL N E C AC
Sbjct: 766 PVLAPVSGVVSAVSDDEA----LACSLENPESCEAC 797
>gi|315506489|ref|YP_004085376.1| ribonucleoside-diphosphate reductase subunit alpha [Micromonospora
sp. L5]
gi|315413108|gb|ADU11225.1| ribonucleoside-diphosphate reductase, alpha subunit [Micromonospora
sp. L5]
Length = 798
Score = 611 bits (1575), Expect = e-172, Method: Compositional matrix adjust.
Identities = 331/816 (40%), Positives = 484/816 (59%), Gaps = 50/816 (6%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V KRDG E V KI +++ + ++ DP+ V+ K +G+Y G TT++LD L+
Sbjct: 22 MRVRKRDGDTEPVDVGKIVRAVER--WVADLDEVDPLRVATKTISGLYDGATTAELDRLS 79
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTK----KSFSETIKDMYNHYNERSGLKAPLI 116
+TAA + P Y+ LAAR++ + + K + SFS++I Y H GL LI
Sbjct: 80 IQTAAELIGEEPQYSKLAARLLAAYVDKEVRGQGVASFSQSIA--YAH-----GLG--LI 130
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLK-VQGK-VVERPQHMLMRV 174
D+ + ++A +LD + D D ++YFG +T+ YLL+ Q + VVE PQ+ L+RV
Sbjct: 131 GDETAAFVARHARKLDDAVDPDGDLRFEYFGLRTVADRYLLRHPQSRLVVETPQYWLLRV 190
Query: 175 AVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
A G+ + A+ Y +MS + +SPTLFN+GT Q+SSCFLV D ++ IY+
Sbjct: 191 ACGLSRTP-GEAVGFYRLMSSLAYLPSSPTLFNSGTRHTQMSSCFLVDSPRDELDSIYER 249
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK +GGIG+S +R G+ IRGTNG SNGIVP L+ + V+QGG +RK
Sbjct: 250 YHQVAKLSKFSGGIGISWSRVRGRGALIRGTNGRSNGIVPFLKTLDAGVAAVNQGG-RRK 308
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA VYLEPWH D+ EFL+LR N G+E R +L A WVPD FM RV+++G WSL P+
Sbjct: 309 GAACVYLEPWHPDVEEFLELRDNTGEESRRTHNLNLANWVPDEFMRRVEADGEWSLVDPS 368
Query: 355 EAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKK 414
+AP L D +G F+ Y EK A + V+A++L+ ++++ +TG +M FKD N+
Sbjct: 369 DAPELPDLYGEAFDAAYRAAEK--NAVRTVRARDLYGRMMRTLAQTGNGWMTFKDAANRL 426
Query: 415 SNQ--QNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGS 472
SNQ + I SNLCTE+++ ETAVCNL S+ L +V GV
Sbjct: 427 SNQTGEPGNVIHLSNLCTEILEVNDDAETAVCNLGSVNLGAHVTADGV------------ 474
Query: 473 RGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
D+E+L L+++ID+NYYP E A SN R RP+G+G+ GL D F
Sbjct: 475 --------DWERLRATVRTAVVFLDRVIDINYYPAEQAAASNPRWRPVGLGLMGLQDAFF 526
Query: 533 LLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGV 592
L +PFDS +A++L+ + E I AL TS+ +A R GP+ Y + +KG L PD+WG
Sbjct: 527 TLRLPFDSAQAKELSTRVQEEILLTALETSAGLAERFGPHPAYPQTRAAKGDLHPDLWGA 586
Query: 593 NPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
P+ W LR+ I+ +G+RNSLLVA PTA+ + I G EC EP SN++ R +SGE
Sbjct: 587 EPAQAGRWAALRERIAVHGLRNSLLVAIAPTATIASIAGCYECVEPQVSNLFKRETMSGE 646
Query: 653 FVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVD 712
F+ VN +L+ +L GLW+P ++++I +GSVQ I ++P ++ +++T WE+ Q+ L+D
Sbjct: 647 FLQVNTYLVRELKARGLWTPQVRDRIKRAEGSVQDITELPAPVRELFRTAWELPQRALID 706
Query: 713 MAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
+A R ++D SQSLN+ + P GKL+S++ +AW GLKT YYLRSR A + TV
Sbjct: 707 LAAARAPFVDQSQSLNLFLSAPTIGKLSSMYLYAWKAGLKT-TYYLRSRPATRIQQATVA 765
Query: 773 TSVLKENPKVT--DDDDAKMAQMVCSLTNREECMAC 806
+ + V+ DD+A + CSL N E C AC
Sbjct: 766 PVLAPVSGVVSAVSDDEA----LACSLENPESCEAC 797
>gi|355717365|gb|AES05909.1| ribonucleotide reductase M1 [Mustela putorius furo]
Length = 434
Score = 608 bits (1567), Expect = e-171, Method: Compositional matrix adjust.
Identities = 287/416 (68%), Positives = 349/416 (83%), Gaps = 6/416 (1%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KRDG+QE V FDKIT+R++KL YGL+++ DP ++ KV G+Y GVTT +LD LA
Sbjct: 1 MHVIKRDGRQERVMFDKITSRIQKLCYGLNMDFVDPAQITMKVIQGLYSGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AETAA +TT HPDYA LAARI VSNLHK TKK FS+ ++D+YN+ N +G +P++A
Sbjct: 61 AETAATLTTKHPDYAILAARIAVSNLHKETKKVFSDVMEDLYNYINPHNGRHSPMVAKST 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI++ N RL+S IIYDRDF Y+YFGFKTLERSYLLK+ GKV ERPQHMLMRV+VGIH+
Sbjct: 121 LDIVLANKDRLNSAIIYDRDFSYNYFGFKTLERSYLLKINGKVAERPQHMLMRVSVGIHE 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+DID+AI+TY+++S+RWFTHASPTLFNAGT R QLSSCFL+ MKDDSIEGIYDTLK+CA+
Sbjct: 181 EDIDAAIETYNLLSERWFTHASPTLFNAGTNRPQLSSCFLLSMKDDSIEGIYDTLKQCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKR------K 294
ISKSAGGIGV+V IRATGSYI GTNG SNG+VPMLRV+N+TARYVDQGG KR
Sbjct: 241 ISKSAGGIGVAVSCIRATGSYIAGTNGNSNGLVPMLRVYNNTARYVDQGGNKRPGAFAIX 300
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GAFA+YLEPWH DIFEFLDL+KN GKEE RARDLF+ALW+PDLFM+RV++N WSL CPN
Sbjct: 301 GAFAIYLEPWHLDIFEFLDLKKNTGKEEQRARDLFFALWIPDLFMKRVETNQDWSLMCPN 360
Query: 355 EAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDT 410
E PGL + WG EFE+LY YEK+G+ +KVV+AQ LW+ I++SQ ETGTPYML+KD+
Sbjct: 361 ECPGLDEVWGEEFEKLYESYEKQGRVRKVVKAQQLWYAIIESQTETGTPYMLYKDS 416
>gi|145596897|ref|YP_001161194.1| ribonucleoside-diphosphate reductase subunit alpha [Salinispora
tropica CNB-440]
gi|145306234|gb|ABP56816.1| ribonucleoside-diphosphate reductase, alpha subunit [Salinispora
tropica CNB-440]
Length = 909
Score = 607 bits (1565), Expect = e-171, Method: Compositional matrix adjust.
Identities = 334/829 (40%), Positives = 487/829 (58%), Gaps = 60/829 (7%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V KR+G E V +KI +++ + ++ DP+ V+ K +G+Y G TT++LD L+
Sbjct: 117 MGVRKRNGDTEPVDVNKIVRAVER--WVADLDEVDPLRVATKTISGLYDGATTAELDRLS 174
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTK----KSFSETIKDMYNHYNERSGLKAPLI 116
+TAA + P Y+ LAAR++ + + K + SFS++I+ Y H GL LI
Sbjct: 175 IQTAAELIGEEPQYSKLAARLLAAYVDKEVRGQQVASFSQSIR--YAH-----GLG--LI 225
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLK-VQGK-VVERPQHMLMRV 174
+D+ + +NA +LD + D ++YFG +T+ YLL+ Q + VVE PQ+ L+RV
Sbjct: 226 SDETAAFVSRNARKLDDAVDPAGDLRFEYFGLRTVADRYLLRHPQSRLVVETPQYWLLRV 285
Query: 175 AVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
A G+ + AI Y +MS + +SPTLFN+GT Q+SSCFLV D ++ IY
Sbjct: 286 ACGLSGTPAE-AIGFYRLMSSLAYLPSSPTLFNSGTRHTQMSSCFLVDSPRDELDSIYQR 344
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK +GGIG++ +R G+ IRGTNG SNGIVP L+ + V+QGG +RK
Sbjct: 345 YHQVAKLSKFSGGIGIAWSRVRGRGALIRGTNGRSNGIVPFLKTLDAGVAAVNQGG-RRK 403
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA VYLEPWH DI EFL+LR N G++ R +L A W+PD FM RV+++G WSL P+
Sbjct: 404 GAACVYLEPWHPDIEEFLELRDNTGEDARRTHNLNLANWLPDEFMRRVEADGDWSLIDPS 463
Query: 355 EAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKK 414
EAP L D +G EF+ Y EK KA + V+A++L+ ++++ +TG +M FKD N
Sbjct: 464 EAPELPDLYGEEFDAAYRVAEK--KAVRTVKARDLYGRMMRTLAQTGNGWMTFKDRSNTL 521
Query: 415 SNQ--QNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGS 472
SNQ + TI SNLCTE+++ + ETAVCNL S+ L +V GV
Sbjct: 522 SNQTGEPGNTIHLSNLCTEILEVNNDAETAVCNLGSVNLGAHVTADGV------------ 569
Query: 473 RGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
D+EKL + L+++ID+NYYP E A SN R RP+G+G+ GL D F
Sbjct: 570 --------DWEKLRDTVRTAVVFLDRVIDINYYPAEQAAASNPRWRPVGLGLMGLQDAFF 621
Query: 533 LLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGV 592
L +PFDS EA +L+ + E I+ AL TS+ +A R GP+ Y + ++G L P++WG
Sbjct: 622 TLRLPFDSAEASELSTRVQEEIFLTALETSAGLAERFGPHPAYAQTRAARGDLHPELWGA 681
Query: 593 NPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
PS W GL+ + ++G+RNSLLVA PTA+ + I G EC EP SN++ R +SGE
Sbjct: 682 VPSQPQRWAGLKARVGEHGLRNSLLVAIAPTATIASIAGCYECIEPQVSNLFKRETMSGE 741
Query: 653 FVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVD 712
F+ VN +L+ +L GLW+ I+++I +GSVQ + ++P E++ +++T WE+ Q+ L+D
Sbjct: 742 FLQVNTYLVGELKARGLWTASIRDQIKRAEGSVQGLAELPAEVRELFRTAWELPQRALID 801
Query: 713 MAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
+A R YID SQSLN+ + P GKL+S++ +AW GLKT YYLRSR A + TV
Sbjct: 802 LAAARAPYIDQSQSLNLFLAAPTIGKLSSMYLYAWKSGLKT-TYYLRSRPATRIQQATVA 860
Query: 773 TSVLKENPKVTDDDDAKMA---------------QMVCSLTNREECMAC 806
+ + P V A+ + CSL N E C AC
Sbjct: 861 VTSTAQ-PGVAVASSAQPGGAASSISGFAGTDAEALACSLENPESCEAC 908
>gi|383777026|ref|YP_005461592.1| putative ribonucleoside-diphosphate reductase large subunit
[Actinoplanes missouriensis 431]
gi|381370258|dbj|BAL87076.1| putative ribonucleoside-diphosphate reductase large subunit
[Actinoplanes missouriensis 431]
Length = 786
Score = 602 bits (1551), Expect = e-169, Method: Compositional matrix adjust.
Identities = 326/814 (40%), Positives = 477/814 (58%), Gaps = 52/814 (6%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V KR+G+ E V +KI +++ + ++ DP+ V+ K +G+Y G TT++LD+L+
Sbjct: 16 MQVRKRNGETEPVDVNKIVTAVER--WVADLDEVDPLRVATKTISGLYDGATTAELDKLS 73
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLI 116
+TAA + P Y+ LAAR++ + + + ++ FSE+I R G + LI
Sbjct: 74 IQTAAELIGEEPQYSRLAARLLAAFVEQEVREEGVAGFSESI---------RLGHQQGLI 124
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGK--VVERPQHMLMRV 174
+D+ + ++A LD I + ++YFG +T+ YLL+ K V+E PQH L+RV
Sbjct: 125 SDETAAFVAEHATVLDQAIDDANNLRFEYFGLRTVADRYLLRHPTKRTVIETPQHWLLRV 184
Query: 175 AVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
A G+ + AI Y +MS + +SPTLFN+GT Q+SSCFLV D ++ IY+
Sbjct: 185 ACGL-SETPGEAIGFYRLMSSLAYLPSSPTLFNSGTRHTQMSSCFLVDSPKDELDSIYER 243
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK +GGIG+S +R G+ IRGTNG SNGIVP L+ + V+QGG +RK
Sbjct: 244 YHQVAKLSKFSGGIGISWSRVRGRGALIRGTNGKSNGIVPFLKTLDAGVAAVNQGG-RRK 302
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA VYLEPWH DI EFL+LR N G+E R +L A W+PD FM RV+++ WSL P+
Sbjct: 303 GAACVYLEPWHPDIEEFLELRDNTGEESRRTHNLNLANWIPDEFMRRVEADEDWSLIDPS 362
Query: 355 EAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKK 414
+AP L D +G EF Y EK A K ++A++L+ ++++ +TG +M FKD N+
Sbjct: 363 DAPMLPDLFGDEFTEAYRAAEK--NAVKTIKARDLYGRMMRTLAQTGNGWMTFKDPSNRL 420
Query: 415 SNQQNL--GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGS 472
SNQ I SNLCTE+++ + ETAVCNL S+ L +V GV
Sbjct: 421 SNQTGAPGNVIHLSNLCTEILEVNNDAETAVCNLGSVNLGAHVTADGV------------ 468
Query: 473 RGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
D+EKL E L+++ID+NYYP + A SN R RP+G+G+ GL D F
Sbjct: 469 --------DWEKLRETVRTAVVFLDRVIDINYYPAQQAAASNPRWRPVGLGLMGLQDAFF 520
Query: 533 LLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGV 592
L +PFDS EA++L+ + E I+ AL +S+ +A R GP+ Y + +KG L P +WG
Sbjct: 521 TLRLPFDSAEARELSTRVQEEIFLTALESSAALAERFGPHPAYPETRAAKGDLHPYLWGA 580
Query: 593 NPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
PS W +++ I+ +G+RNSLLVA PTA+ + I G EC EP SN++ R +SGE
Sbjct: 581 EPSQNARWAAVKERIAAHGLRNSLLVAIAPTATIASIAGCYECIEPQVSNLFKRETMSGE 640
Query: 653 FVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVD 712
F+ +N +L+ +L LW+ I+ I +GSVQ I ++P +++ +++T WE+ Q+ L+D
Sbjct: 641 FLQINTYLVRELKSRNLWTAGIREAIKRAEGSVQGIAELPADVRELFRTAWELPQRALID 700
Query: 713 MAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
+A R YID SQSLN+ M P GK++S++ +AW GLKT YYLRSR A + TV
Sbjct: 701 LAAARAPYIDQSQSLNLFMAAPTIGKVSSMYLYAWKAGLKTS-YYLRSRPATRIQQATVS 759
Query: 773 TSVLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
+ P V A VCSL N E C AC
Sbjct: 760 VA-----PSVI---PALTPAEVCSLENPESCEAC 785
>gi|328719872|ref|XP_003246886.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Acyrthosiphon pisum]
Length = 766
Score = 600 bits (1546), Expect = e-168, Method: Compositional matrix adjust.
Identities = 327/789 (41%), Positives = 471/789 (59%), Gaps = 52/789 (6%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTG-VYKGVTTSQLDEL 59
+YV KRDG E VH+D+I AR+K+L YGL E DP + V ++ G+TTSQLD+
Sbjct: 8 LYVQKRDGTIEKVHYDEIIARIKQLCYGL--EKIDPAATAIHVIKKCLFAGITTSQLDDA 65
Query: 60 AAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNE---RSGLKAPLI 116
AAE A M T HPDY LAARI +SNLHK TK+ FS+ I D+ H N+ +GL
Sbjct: 66 AAEMAITMATIHPDYEKLAARIAISNLHKQTKEKFSDVIDDI--HKNDDYWNTGL----- 118
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAV 176
+DD+Y+IIMKN RL+ I Y+ D+ DYFGFK L +++L+K + + +ERPQH+ M+VAV
Sbjct: 119 SDDIYEIIMKNKDRLNEAINYENDYILDYFGFKYLTQNFLVKSENQTIERPQHLFMKVAV 178
Query: 177 GIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLS----SCFLVCMKDDSIEGIY 232
IH DDIDSAI+TY M+SQ+ SP + +L+ S + V M DSI+GIY
Sbjct: 179 SIHGDDIDSAIETYKMLSQK-LCMFSPVVMQLQPAARKLNVSVISHYSVAMIADSIDGIY 237
Query: 233 DTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGK 292
DTL + + V VH IRA G+YI+G+NG S+G+ ML+ + D+ + + +
Sbjct: 238 DTLNRLSTFILPYSSVAVHVHKIRAAGTYIKGSNGKSSGLPLMLKQY-DSMVHCKETLER 296
Query: 293 RKG--AFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSL 350
K A+Y E WHADI + +D + + + ++ ALW+PD FM RV+++ +WS
Sbjct: 297 PKSIKGVAIYCELWHADIMKIIDQIRKTTIADIKLKNSQLALWIPDEFMRRVENDQMWSF 356
Query: 351 FCPNEAPGLADCWGTEFERLYTKYEKEGKA--KKVVQAQNLWFEILKSQIETGTPYMLFK 408
P+ PGL D G EF+ LY +YE + K+ + ++A+ LW +I++SQIETG P +LFK
Sbjct: 357 MSPDHCPGLIDVHGEEFDNLYKEYELKSKSFVMRQIEAKKLWSQIIQSQIETGLPLLLFK 416
Query: 409 DTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSK 468
D CN KSN+ +LGTI+ + + +Q+T+ E A C ASI++ ++ +
Sbjct: 417 DACNAKSNESHLGTIQCAGRNGDTVQFTASDEVATCTTASISVDMFLTSENI-------- 468
Query: 469 LVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNL----RHRPIGIGV 524
FDF KL E +T +LNKII+ N + + L IGIG+
Sbjct: 469 -----------FDFSKLKETAKKITYDLNKIIENNNVILNKEDQLKLGLKQNQLAIGIGI 517
Query: 525 QGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGI 584
QGLAD FI + PFD+ EA+ LN I ETIYY AL S E+A++ GPY+TY SP SKG+
Sbjct: 518 QGLADLFIKMRYPFDNKEARYLNIQIHETIYYGALEASCELASKNGPYKTYPNSPTSKGL 577
Query: 585 LQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIY 644
LQ D+W V PS+ WDW L+ I+++G+RNSL+ T S I GN EP +N+
Sbjct: 578 LQFDLWNVKPSNLWDWNSLKTKIAQHGLRNSLVTVTSNTEVESTIFGNVNSIEPLDTNVK 637
Query: 645 SRRVLSG-----EFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIY 699
R + G E VVN +LL DL + LW + +++ + GS+Q+I +P++LK +Y
Sbjct: 638 RRYISLGESKPKEIQVVNPYLLKDLHDRKLWDEKLIPELVNNMGSIQEI-NLPDDLKQLY 696
Query: 700 KTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLR 759
+T WEI QK LV MA DR +ID SQ+ +++M + N ++ +H W GLKTG+ LR
Sbjct: 697 RTKWEIDQKVLVTMAADRAPFIDQSQAFSLNMVKANEDIISEMHISTWKMGLKTGVCQLR 756
Query: 760 SRAAADAIK 768
+ + ++
Sbjct: 757 IKQTEEDLR 765
>gi|392558225|gb|EIW51419.1| alpha subunit of ribonucleoside diphosphate reductase [Trametes
versicolor FP-101664 SS1]
Length = 838
Score = 598 bits (1541), Expect = e-168, Method: Compositional matrix adjust.
Identities = 305/739 (41%), Positives = 458/739 (61%), Gaps = 45/739 (6%)
Query: 39 VSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTK-KSFSET 97
++ + GV +++ + ELAA TAA T+HP Y LA R+V +N+HK + FS+
Sbjct: 46 IASAITHGVQAAMSSHDIQELAALTAANFNTHHPQYNILAGRLVAANIHKVVPIRRFSDN 105
Query: 98 IKDMYNHYNERSGLKAPLIADDVYDIIMKNAAR----LDSEIIYDRDFDYDYFGFKTLER 153
+ ER + P + D+ + + NA R LD+ ++ DRDF Y K +E+
Sbjct: 106 V--------ERIVAEHPGLLDETF---VANARRYGEQLDNMLMQDRDFGMPYPCIKLMEQ 154
Query: 154 SYLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRA 213
SYLL+V ++ERPQH MRVA+ ++ +DI++ +TY+M+S+R +THASPT+FNAG
Sbjct: 155 SYLLRVGDAILERPQHAYMRVALALNANDINAIEETYNMLSRRAYTHASPTMFNAGLSDQ 214
Query: 214 QLSSCFLVCMK----DDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTS 269
L SCF+ + D+I+G+ + A + S GIG+ + + A Y N
Sbjct: 215 ALISCFVQSAEYTSTPDAIKGMMQASE--AFLKNS--GIGIGLDKVPA---YRPDANPPQ 267
Query: 270 NGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLF 329
G++ +L ++ A + KR A + WHAD+ + +++R+ + + RD++
Sbjct: 268 PGVIALLNMYQQVAEFTTDARSKRPSAATAVIPIWHADVTKVINIRRGNVLGQAPLRDIY 327
Query: 330 YALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNL 389
ALW+ DLFM RVQ N WSLF P +AP LA+ +G FE YT+ E+ + V A++L
Sbjct: 328 PALWIADLFMRRVQENVYWSLFDPADAPQLAELYGAAFEAEYTQLEQSNIQRVTVLARSL 387
Query: 390 WFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASI 449
+++I+ QI +GTPY+++ D N K+NQ +LGTI+++NLCTE++Q++S T T VC L+S+
Sbjct: 388 FYQIVVMQIRSGTPYIMYADAINAKNNQSHLGTIRATNLCTEIVQFSSRTRTPVCALSSL 447
Query: 450 ALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVET 509
+LP +V S + FDF+ L T + T ++++D+N YP
Sbjct: 448 SLPAFV------------------SSDDHTFDFDALHHATKVATRCTDRVLDINDYPSPE 489
Query: 510 ARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAARE 569
AR S + R IG+GVQGLAD F ++G+P+ S EA++LN IFETIY+ AL SSE+A R
Sbjct: 490 ARASAVETRAIGVGVQGLADVFRMMGIPYGSDEARRLNVSIFETIYHGALEESSEMAERF 549
Query: 570 GPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQI 629
GP+ ++ SP S+G+LQ DMW PSDR+D+ LR I+K+G+RNS+L A MPT+STSQ+
Sbjct: 550 GPFPAWNRSPASQGVLQCDMWNCTPSDRYDFDALRARIAKHGLRNSMLTAVMPTSSTSQL 609
Query: 630 LGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIP 689
LGNN+ EPY SNIY+RR L GE+ ++ HL+ +L GLW+P ++ +II GSVQ I
Sbjct: 610 LGNNDSVEPYVSNIYTRRALGGEYHIICPHLVQELERRGLWTPHMRRQIIDARGSVQNIT 669
Query: 690 QIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLR 749
IP+ LKA+Y+T WE+ Q+ V MA DRG YID SQS++++M P L + H ++W
Sbjct: 670 TIPDRLKAVYRTAWEMPQRYTVIMAADRGPYIDQSQSMSLYMRNPTAAALYTAHMYSWQA 729
Query: 750 GLKTGMYYLRSRAAADAIK 768
GLKTGMYYLR+ A A++
Sbjct: 730 GLKTGMYYLRTTAPTYAMQ 748
>gi|408826316|ref|ZP_11211206.1| ribonucleoside-diphosphate reductase subunit alpha [Streptomyces
somaliensis DSM 40738]
Length = 784
Score = 597 bits (1540), Expect = e-168, Method: Compositional matrix adjust.
Identities = 323/797 (40%), Positives = 462/797 (57%), Gaps = 41/797 (5%)
Query: 19 TARLKKLS-YGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASL 77
TA L+ L+ + DP V+ G + G ++L ELA E AA + P Y+ L
Sbjct: 19 TALLRTLTDLTADLPDTDPGRVAAAALRGRHAGSDEAELRELATEAAAGLIAEDPAYSRL 78
Query: 78 AARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIY 137
AAR++ + + +G + LIAD D++ ++AARLD+ I
Sbjct: 79 AARLLARTIADEAAGQGAVAFSASVA-----AGHREGLIADRTADLVARHAARLDAVIDP 133
Query: 138 DRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRVAVGIHKDDIDSAI----KTYH 191
+ D + YFG +TL YLL+ + KVVE PQH L+RVA G+ +DD D A+ Y
Sbjct: 134 EADDRFGYFGLRTLYSRYLLRHPITRKVVETPQHFLLRVACGLAEDDSDRALGEVEALYG 193
Query: 192 MMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVS 251
+MS+ + +SPTLFN+GT Q+SSC+L+ D ++ IY + A +SK AGGIG+S
Sbjct: 194 LMSRLDYLPSSPTLFNSGTRHPQMSSCYLLDSPQDELDSIYGRYHQVARLSKHAGGIGLS 253
Query: 252 VHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEF 311
IRA GS IRGTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WHADI EF
Sbjct: 254 YSRIRARGSLIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHADIEEF 312
Query: 312 LDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLY 371
L+LR N G++ R +L A WVPD FM RV + WSLF P++ P L D WG EF+ Y
Sbjct: 313 LELRDNTGEDARRTHNLNLAHWVPDEFMRRVSDDAEWSLFSPSDVPELVDLWGEEFDAAY 372
Query: 372 TKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQ--QNLGTIKSSNLC 429
E G A++ + A++L+ ++++ +TG +M FKD N+ +NQ + T+ SSNLC
Sbjct: 373 RAAEARGLARRTMPARDLYGRMMRTLAQTGNGWMTFKDAANRTANQTAEPGHTVHSSNLC 432
Query: 430 TEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVT 489
TE+++ T ETAVCNL S+ L +V G+ D+E+L E
Sbjct: 433 TEILEVTDDGETAVCNLGSVNLGAFVTGGGM--------------------DWERLDETV 472
Query: 490 GIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKD 549
L++++D+N+YP E A RSN R RP+G+GV GL D F L +PFDS EA+ L+
Sbjct: 473 RTAVTFLDRVVDINFYPTEEAARSNTRWRPVGLGVMGLQDVFFKLRLPFDSPEARALSTR 532
Query: 550 IFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISK 609
I E I A S+++A R GP + + ++G+L PD + V P+ W LR+ I+
Sbjct: 533 IAERIMLAAYGASADLAERSGPLPAWDKTRTARGVLHPDHYDVEPAWPERWAALRERIAS 592
Query: 610 NGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGL 669
G+RNSLL+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ DL E+G+
Sbjct: 593 VGLRNSLLLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVDDLKELGV 652
Query: 670 WSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNI 729
W + + +GSVQ +P E++ +Y+T WEI Q+ L+DMA R ++D SQSLN+
Sbjct: 653 WDAQTREALREANGSVQGFTWVPAEVRELYRTAWEIPQRGLIDMAAARTPFLDQSQSLNL 712
Query: 730 HMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAK 789
++ P GKL+S++ +AW +GLKT YYLRSR A + +V +V++ D
Sbjct: 713 FLETPTIGKLSSMYAYAWKQGLKT-TYYLRSRPATRIARAASAATVPVPVQQVSEPD--- 768
Query: 790 MAQMVCSLTNREECMAC 806
+ CSL N E C AC
Sbjct: 769 --AVACSLENPESCEAC 783
>gi|443290855|ref|ZP_21029949.1| Ribonucleoside-diphosphate reductase large chain [Micromonospora
lupini str. Lupac 08]
gi|385886410|emb|CCH18023.1| Ribonucleoside-diphosphate reductase large chain [Micromonospora
lupini str. Lupac 08]
Length = 797
Score = 597 bits (1539), Expect = e-168, Method: Compositional matrix adjust.
Identities = 316/812 (38%), Positives = 469/812 (57%), Gaps = 46/812 (5%)
Query: 3 VVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAE 62
V KRDG E V K+ A +++ + + DP+ V+ + +G+Y G TT++LD L +
Sbjct: 23 VRKRDGASEPVDVRKLAATVER--WADDLPDVDPLRVATRTISGLYDGATTAELDRLTIQ 80
Query: 63 TAAAMTTNHPDYASLAARIVVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLIAD 118
TAA + P Y+ LAAR++ S++ + ++ SFS I R+G LI D
Sbjct: 81 TAAELIGTEPQYSRLAARLLASHVEREVRRQGVTSFSAAI---------RAGHAQGLIGD 131
Query: 119 DVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRVAV 176
+ + + LD + D D ++YFG +T+ YLL+ V+E PQ+ L+RVA
Sbjct: 132 ETAAFVAAHGRALDDAVDADGDRRFEYFGLRTVYDRYLLRHPTTRLVLETPQYWLLRVAC 191
Query: 177 GIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLK 236
G+ + D A+ Y +MS + +SPTLFNAGT Q+SSC+LV D ++ IY
Sbjct: 192 GLSRTP-DEAVDFYRLMSSLAYLPSSPTLFNAGTRHTQMSSCYLVDSPRDELDSIYQRYA 250
Query: 237 ECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGA 296
+ A +SK AGGIG++ +R+ G+ IRGTNG SNGIVP LR + + V+QGG +RKGA
Sbjct: 251 QVANLSKFAGGIGIAYSRVRSRGALIRGTNGQSNGIVPWLRTLDASVAAVNQGG-RRKGA 309
Query: 297 FAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEA 356
VYLEPWH DI EFL LR N G++ R +L A W+PD FM RV+++ +WSLF P+E
Sbjct: 310 ACVYLEPWHPDIEEFLQLRDNTGEDARRTHNLNLANWIPDEFMRRVEADEVWSLFDPDEV 369
Query: 357 PGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSN 416
P L D WG F+ Y E +G+ + + A+ L+ +++++ +TG +M FKD N+ N
Sbjct: 370 PELPDLWGERFDAAYRAAEAQGRYVRQLPARELYGKMMRTLAQTGNGWMTFKDAANRLCN 429
Query: 417 Q--QNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRG 474
Q + + SNLCTE+++ +S ETAVCNL S+ + ++ + G+
Sbjct: 430 QTAEPGNVVHLSNLCTEIVEVSSDAETAVCNLGSVNVAAHLTDDGI-------------- 475
Query: 475 SKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILL 534
D+ +L L+++ID+NYYP A SN R RP+G+G+ GL D F L
Sbjct: 476 ------DWPRLRATVRTAVTFLDRVIDINYYPTPQAAASNPRWRPVGLGLMGLQDVFFAL 529
Query: 535 GMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP 594
+PFDS A++L+ I E +Y AL TS+++A G + Y + ++G LQPD+WGV+
Sbjct: 530 RLPFDSPAARELSTRISEELYLTALETSADLARDFGAHPAYAQTRAARGQLQPDLWGVDG 589
Query: 595 SDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFV 654
+ W LR + G+RNSLLVA PTA+ + I G EC EP SN++ R LSGEF+
Sbjct: 590 TQTARWAALRQRVGAYGLRNSLLVAVAPTATIASIAGCYECVEPQVSNLFKRETLSGEFL 649
Query: 655 VVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMA 714
VN L+ +L GLW+ I++ I +GSVQ + ++P +++ +++T WE+ Q+ L+D+A
Sbjct: 650 QVNTALVRELKARGLWTEQIRSAIRRAEGSVQDVTELPADVRELFRTAWELPQRALIDLA 709
Query: 715 VDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTS 774
R +ID SQSLN+ + P GKL+S++ +AW GLKT YYLRSR A + TV
Sbjct: 710 AARAPFIDQSQSLNLFLASPTIGKLSSMYLYAWKTGLKT-TYYLRSRPATRIQQATVSAV 768
Query: 775 VLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
V D +A + CSL N E C AC
Sbjct: 769 TPVAVGPVAVDAEA----LACSLENPESCEAC 796
>gi|256825984|ref|YP_003149944.1| ribonucleoside-diphosphate reductase subunit alpha [Kytococcus
sedentarius DSM 20547]
gi|256689377|gb|ACV07179.1| ribonucleoside-diphosphate reductase, alpha subunit [Kytococcus
sedentarius DSM 20547]
Length = 875
Score = 596 bits (1536), Expect = e-167, Method: Compositional matrix adjust.
Identities = 330/864 (38%), Positives = 482/864 (55%), Gaps = 83/864 (9%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M VVKR G+ E V KI A +++ GL DP+ V+ K +G+Y G TT++LD+LA
Sbjct: 36 MRVVKRSGEHEQVDVTKIVAAVERCCDGLP--EVDPLRVATKTISGLYDGATTAELDKLA 93
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLI 116
TAA MT P Y+ LA R++ + K + SFS + R+G + LI
Sbjct: 94 IATAAEMTATEPQYSRLAGRLLAGVIDKEVRGQGIGSFSAAV---------RTGHEQGLI 144
Query: 117 ADDVYDIIMKNAARLDSEIIYDR----DFDYDYFGFKTLERSYLLK--VQGKVVERPQHM 170
D+ + ++A+RLD + + D+ +DYFG +T+ YLL+ + VVE PQ+
Sbjct: 145 GDETAAFVAEHASRLDDAVYRAQAAHADWRFDYFGLRTVYDRYLLRHPLTRAVVESPQYW 204
Query: 171 LMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEG 230
LMRV+ G+ + A++ + ++S + +SPTLFN+GT Q+SSC+L+ D ++
Sbjct: 205 LMRVSAGLSHTG-EEAVEFFELLSSLAYLPSSPTLFNSGTRHTQMSSCYLIDSPQDDLDS 263
Query: 231 IYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGG 290
IY+ + A +SK AGGIG++ IR+ G+ IRGTNG SNGIVP LR + + V+QGG
Sbjct: 264 IYERYHQVAKLSKFAGGIGLAFSRIRSRGALIRGTNGHSNGIVPWLRTLDASVAAVNQGG 323
Query: 291 GKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSL 350
+RKGA +YLEPWH D+ EFL+LR N G++ R +L A W+PD FM RV+++G WSL
Sbjct: 324 -RRKGAACIYLEPWHPDVEEFLELRDNTGEDARRTHNLNLAHWIPDEFMRRVEADGQWSL 382
Query: 351 FCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDT 410
P+ P L D WG F+ Y E+ G + V A+ L+ ++++ +TG +M FKD
Sbjct: 383 IDPDAVPELPDLWGPAFDAAYRAAEERGDVVRTVSARYLYGRMMRTLAQTGQGWMTFKDA 442
Query: 411 CNKKSNQ---------------QNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYV 455
N+ NQ Q + SNLCTE+I+ TS ETAVCNL S+ L ++
Sbjct: 443 SNRACNQTSDDQTPRVAADGTVQPAPVVHLSNLCTEIIEVTSNDETAVCNLGSVNLAAHL 502
Query: 456 R----EMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETAR 511
+ GV ++ G D ++L + L+++ID+NYYP E A
Sbjct: 503 QWSDGTTGVRPTDPAARATG--------IDTDRLRSTVRLAVTYLDRVIDINYYPSEQAA 554
Query: 512 RSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGP 571
SN R RPIG+G GL D F L MPFD+ EA++L+ I E I AL S+E+A + G
Sbjct: 555 ASNPRWRPIGLGSMGLQDVFFALRMPFDAPEAKELSTRIAEEIQLSALERSAELAEQFGA 614
Query: 572 YETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILG 631
+ + + ++G LQ D+ GV P+ W +R I+ +G+RNSL++A PTA+ + I G
Sbjct: 615 HPAFAETRAARGQLQHDLQGVEPTQTERWAAVRQRIADHGLRNSLMIAIAPTATIASIAG 674
Query: 632 NNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQI 691
EC EP SN++ R LSGEF+ VN L+ +L +GLW+ ++ K+ D+GSV I +
Sbjct: 675 CYECIEPQVSNLFKRETLSGEFMQVNTALVGELKSLGLWTEAVREKLKADNGSVAGIADL 734
Query: 692 PEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGL 751
PEE + +++T WE+ QK L++MA R Y+D SQSLN+ M+ PN GKL+S++ +AW GL
Sbjct: 735 PEETRRLFRTAWELPQKALIEMAAARQAYVDQSQSLNLFMESPNIGKLSSMYLYAWKAGL 794
Query: 752 KTGMYYLRSRAAADAIKFTVD-----------------------------TSVLKENPKV 782
KT YYLRSR A + TV + P
Sbjct: 795 KT-TYYLRSRPATRIQQATVAGVRAGASWGAATGAPGASQPTAPGSPGVVGGLTASEPVR 853
Query: 783 TDDDDAKMAQMVCSLTNREECMAC 806
T D+ +A CSL N E C AC
Sbjct: 854 TFTDEEALA---CSLENPEACEAC 874
>gi|328722126|ref|XP_003247490.1| PREDICTED: ribonucleoside-diphosphate reductase large subunit-like
[Acyrthosiphon pisum]
Length = 767
Score = 593 bits (1530), Expect = e-167, Method: Compositional matrix adjust.
Identities = 326/777 (41%), Positives = 461/777 (59%), Gaps = 45/777 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTG-VYKGVTTSQLDEL 59
++V KRDG E VH+D ITAR+K+L YGL E DP + V +Y G+TTSQLD+
Sbjct: 8 LHVQKRDGTIEKVHYDAITARIKQLCYGL--EKIDPAATAIHVIKKFLYAGITTSQLDDA 65
Query: 60 AAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERS-GLKAPLIAD 118
AAETA M T HPDY LAARI +SNLHK TK+ FS+ I D++ +YN + GL +D
Sbjct: 66 AAETAITMATIHPDYEKLAARIAISNLHKQTKEKFSDVIDDIHKNYNYWNIGL-----SD 120
Query: 119 DVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGI 178
D+Y+IIMK+ RL+ I Y+ D+ DYFGFK L + +L+K + + +ERPQH+ M+VAVGI
Sbjct: 121 DIYEIIMKHKDRLNEAINYENDYILDYFGFKYLIQHFLVKSENQTIERPQHLFMKVAVGI 180
Query: 179 HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLS----SCFLVCMKDDSIEGIYDT 234
H DDIDSAI+TY M+SQ+ SP + +L+ S + V M DSI+GIYDT
Sbjct: 181 HGDDIDSAIETYKMLSQK-LCMFSPVVMQLQPAARKLNVSVISHYSVAMIADSIDGIYDT 239
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQ-GGGKR 293
+ + + VH IRA G+YI+G+ G S+G+ ML+ ++ R + K
Sbjct: 240 SIRLSSFILPYSSVALHVHKIRAAGTYIQGSYGESSGLPLMLKQYDSIVRNSETLERPKS 299
Query: 294 KGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCP 353
+Y E WHADI + +D + + + ++ ALW+PD FM RVQ++ +WS P
Sbjct: 300 IKGVTIYCELWHADIMKVIDQIRMTSIADIKLKNCQLALWIPDEFMRRVQNDQMWSFMSP 359
Query: 354 NEAPGLADCWGTEFERLYTKYEKEGKA--KKVVQAQNLWFEILKSQIETGTPYMLFKDTC 411
+ PGL D G EF+ LY +YE + K+ + ++A+ LW +I++SQIETG P +LFKD C
Sbjct: 360 DHCPGLIDVHGKEFDNLYKEYELKSKSFVMRQIEAKKLWSQIIQSQIETGLPLLLFKDAC 419
Query: 412 NKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVG 471
N KSN+ +LGTI+ + + +Q+T+ E A C ASI++ ++ +
Sbjct: 420 NAKSNESHLGTIQCAGRNGDTVQFTASDEVATCTTASISVDMFLTSENI----------- 468
Query: 472 SRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNL----RHRPIGIGVQGL 527
FDF KL E +T +LNKIID N + ++ L IGIGVQGL
Sbjct: 469 --------FDFSKLKETAKKLTYDLNKIIDNNNVILNKEKQLELGLKQNQWAIGIGVQGL 520
Query: 528 ADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQP 587
AD FI + PFD+ EA+ LN I E+IYY AL S E+A GPY+T+ SP SKG+LQ
Sbjct: 521 ADLFIKMKYPFDNKEARVLNTQIHESIYYGALEASCELATTNGPYKTFPNSPTSKGLLQF 580
Query: 588 DMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRR 647
D+W V PS+ WDW L+ I+++G+RNSL+ T S I G EP +N+ R
Sbjct: 581 DLWNVKPSNLWDWNNLKTKITQHGLRNSLVTVTSNTEVESTICGKVNSIEPLDTNVKRRY 640
Query: 648 VLSG-----EFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTV 702
+ G E VVN HLL DL + LW +K +++ + GSVQ+I +PE+LK +YKT
Sbjct: 641 ISLGESKPKEIQVVNPHLLKDLHDRKLWDDNLKYQLMNNMGSVQEIKGLPEDLKQLYKTK 700
Query: 703 WEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLR 759
WEI QK L+ MA DR +ID SQ+ +++M + + ++ + W GLKT + LR
Sbjct: 701 WEIDQKDLIIMAADRAPFIDQSQAFSLNMVKADEDIISEMLISTWKMGLKTAVCQLR 757
>gi|383650824|ref|ZP_09961230.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
chartreusis NRRL 12338]
Length = 785
Score = 592 bits (1526), Expect = e-166, Method: Compositional matrix adjust.
Identities = 319/785 (40%), Positives = 452/785 (57%), Gaps = 49/785 (6%)
Query: 34 CDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKS 93
DP V+ G S+L ELA E AA + + P Y+ LAAR++ +
Sbjct: 37 ADPGRVAAAALRGRSARADASELRELATEAAAGLISEDPVYSRLAARLLTIGIRAEAASQ 96
Query: 94 ----FSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFK 149
F+E++ G + LIAD + +AARLD+ I D + YFG +
Sbjct: 97 GVTRFTESVA---------VGHREGLIADRTAAFVRTHAARLDALIDTAADDRFGYFGLR 147
Query: 150 TLERSYLLK--VQGKVVERPQHMLMRVAVGIHKDD----IDSAIKTYHMMSQRWFTHASP 203
TL YLL+ + KVVE PQ+ ++RVA G+ +DD +D Y +MS+ + +SP
Sbjct: 148 TLHSRYLLRHPITRKVVETPQYFMLRVAAGLAEDDTSRSVDEVAALYGLMSRLDYLPSSP 207
Query: 204 TLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT Q+SSC+L+ D ++ IYD + A +SK AGGIG++ IRA GS IR
Sbjct: 208 TLFNSGTRHPQMSSCYLLDSPKDELDSIYDRYHQVARLSKHAGGIGIAYSRIRARGSLIR 267
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEH 323
GTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WH+DI EFL+LR N G++
Sbjct: 268 GTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTGEDAR 326
Query: 324 RARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKV 383
R +L A WVPD FM RV ++G WSLF P++ P L D WG EF+ Y E +G A+K
Sbjct: 327 RTHNLNLAHWVPDEFMRRVNADGQWSLFSPSDVPELVDLWGEEFDAAYRAAEAKGLARKT 386
Query: 384 VQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQ--QNLGTIKSSNLCTEVIQYTSPTET 441
+ A+ L+ ++++ +TG +M FKD N+ +NQ + + SSNLCTE+++ T ET
Sbjct: 387 LPARELYGRMMRTLAQTGNGWMTFKDAANRTANQTAEPGHVVHSSNLCTEILEVTGDGET 446
Query: 442 AVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIID 501
AVCNL S+ L LV G D+E+L E L++++D
Sbjct: 447 AVCNLGSVNL---------------GALVDRSGGD---IDWERLDETVRTAVTFLDRVVD 488
Query: 502 VNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRT 561
+N+YP E A RSN R RP+G+GV GL D F L +PFDS EA++L+ I E I A
Sbjct: 489 INFYPTEQAGRSNARWRPVGLGVMGLQDVFFKLRLPFDSPEAKRLSTRIAERIMLAAYEA 548
Query: 562 SSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPM 621
S+++A R GP + + +KG+L PD + V P+ W LR+ ++ G+RNSLL+A
Sbjct: 549 SADLAERNGPLPAWEKTRTAKGVLHPDHYDVQPTWPERWAALRERVAATGMRNSLLLAIA 608
Query: 622 PTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYD 681
PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ +L +G W + +
Sbjct: 609 PTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVEELKRLGAWDARTREALREA 668
Query: 682 DGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTS 741
+GSVQ IP +++A+Y+T WEI Q+ L+DMA R ++D SQSLN+ M+ P GKL+S
Sbjct: 669 NGSVQDFAWIPADVRALYRTAWEIPQRGLIDMAAARTPFLDQSQSLNLFMETPTIGKLSS 728
Query: 742 LHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAKMAQMVCSLTNRE 801
++ +AW GLKT YYLRSR A + T ++ P D +A + CSL N E
Sbjct: 729 MYAYAWKSGLKT-TYYLRSRPATRIARAAQATVPVQATP----DPEA----VACSLENPE 779
Query: 802 ECMAC 806
C AC
Sbjct: 780 SCEAC 784
>gi|418471849|ref|ZP_13041639.1| ribonucleotide-diphosphate reductase large chain [Streptomyces
coelicoflavus ZG0656]
gi|371547526|gb|EHN75896.1| ribonucleotide-diphosphate reductase large chain [Streptomyces
coelicoflavus ZG0656]
Length = 791
Score = 591 bits (1523), Expect = e-166, Method: Compositional matrix adjust.
Identities = 318/805 (39%), Positives = 465/805 (57%), Gaps = 49/805 (6%)
Query: 16 DKITARLKKLSYGLS--IEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPD 73
D A L + GL+ + DP V+ G ++L ELA E AA + + P
Sbjct: 21 DGPGAALLRTLTGLTADLPGADPGRVAAAALRGRSAHADEAELRELATEAAAGLISEDPV 80
Query: 74 YASLAARIVVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAA 129
Y+ LAAR++ + +F++++ +G + LIAD + +AA
Sbjct: 81 YSRLAARLLTIGIRAEAASQGVVAFTDSVA---------TGHREGLIADRTAAFVRLHAA 131
Query: 130 RLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRVAVGIHKDD----I 183
RLD+ + D + YFG +TL YLL+ + K VE PQH L+RVA G+ +DD +
Sbjct: 132 RLDALVDPAADDRFGYFGLRTLYSRYLLRHPITRKTVETPQHFLLRVAAGLAEDDTVRSV 191
Query: 184 DSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISK 243
D Y +MS+ + +SPTLFN+GT AQ+SSC+L+ D ++ +YD L + A +SK
Sbjct: 192 DEVAALYGLMSRLDYLPSSPTLFNSGTRHAQMSSCYLLDSPKDELDSLYDRLHQVARLSK 251
Query: 244 SAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEP 303
AGGIG++ +RA GS IRGTNG SNGIVP L+ + + V+QGG +RKGA AVYLE
Sbjct: 252 HAGGIGIAYSRVRARGSLIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLET 310
Query: 304 WHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCW 363
WHAD+ EFL+LR N G++ R +L A W+PD FM RV ++G WSLF P + P L D W
Sbjct: 311 WHADVEEFLELRDNTGEDARRTHNLNLAHWIPDEFMRRVDTDGTWSLFSPADVPELTDLW 370
Query: 364 GTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG-- 421
G EF+ Y + E+ G A++ + A+ L+ ++++ +TG +M FKDT N+ +NQ
Sbjct: 371 GEEFDAAYRRAEEAGLARRTLPARELYGRMMRTLAQTGNGWMTFKDTANRTANQTATPGH 430
Query: 422 TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFD 481
+ SSNLCTE+++ T ETAVCNL S+ L +V P + D
Sbjct: 431 VVHSSNLCTEILEVTDDGETAVCNLGSVNLGAFVD----PAQGD--------------MD 472
Query: 482 FEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDST 541
+E+L L++++D+N+YP E A RSN R RP+G+G GL D F L +PFDS
Sbjct: 473 WERLDATVRTAVTFLDRVVDINFYPTEQAGRSNARWRPVGLGAMGLQDVFFQLRLPFDSP 532
Query: 542 EAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWG 601
EA+ L+ I E I A TS+++A R+GP + + ++G+L PD +GV P+ W
Sbjct: 533 EAKALSTRIAERIMLAAYETSADLAERDGPLPAWEKTRTAQGVLHPDHYGVEPAWPERWT 592
Query: 602 GLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
LR ++ G+RNSLL+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+
Sbjct: 593 ALRARMATTGLRNSLLLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLV 652
Query: 662 HDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYI 721
DL +G+W + + +GSVQ IPE+++A+Y+T WEI Q+ L+DMA R Y+
Sbjct: 653 DDLKRLGVWDARTREALREANGSVQGFSWIPEDVRALYRTAWEIPQRGLIDMAAARTPYL 712
Query: 722 DHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPK 781
D +QSLN+ ++ P GKL+S++ +AW +GLKT YYLRSR A + + + +
Sbjct: 713 DQAQSLNLFLETPTIGKLSSMYAYAWKQGLKT-TYYLRSRPATRIARAAGRATAVPV--Q 769
Query: 782 VTDDDDAKMAQMVCSLTNREECMAC 806
D +A + CSL N E C AC
Sbjct: 770 AAPDPEA----VACSLENPESCEAC 790
>gi|291303012|ref|YP_003514290.1| ribonucleoside-diphosphate reductase subunit alpha [Stackebrandtia
nassauensis DSM 44728]
gi|290572232|gb|ADD45197.1| ribonucleoside-diphosphate reductase, alpha subunit [Stackebrandtia
nassauensis DSM 44728]
Length = 771
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 326/801 (40%), Positives = 475/801 (59%), Gaps = 52/801 (6%)
Query: 15 FDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDY 74
D + +++L+ GL+ + VS V G + G T ++L A E AA++ P Y
Sbjct: 13 IDHVVQVVRRLASGLA--DVEAETVSGPVVAGNWPGATEAELRLRAVEVAASLVATEPGY 70
Query: 75 ASLAARIVVSNLHKNTKKS----FSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAAR 130
+ LAAR++ ++ + S FSE + +G +A LI+D +++ + NA +
Sbjct: 71 SRLAARLLSEHIGDEVRLSDVGCFSEAMS---------AGYRAGLISDGLWEFVSSNAPK 121
Query: 131 LDSEIIYDRDFDYDYFGFKTLERSYLLKVQGK--VVERPQHMLMRVAVGIHKDDIDSAIK 188
LD+ + D ++YFG +T+ YLL+ V+E PQH MRVA G+ + + +
Sbjct: 122 LDALVDDGADDRFEYFGIRTVYDRYLLRHPETRLVLETPQHFFMRVACGL-SETVSDVTE 180
Query: 189 TYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGI 248
Y ++S + +SPTLFNAGT R+QLSSCFL+ D +E IYD + A +SK AGGI
Sbjct: 181 LYGLLSTLSYLPSSPTLFNAGTRRSQLSSCFLLDSPRDELESIYDRYSQAARLSKYAGGI 240
Query: 249 GVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADI 308
G++ IR+ GS IRGTNG SNGIVP LR + + V+QGG +RKGA VYL WHADI
Sbjct: 241 GMAWSRIRSRGSLIRGTNGHSNGIVPWLRTLDSSVAAVNQGG-RRKGAACVYLATWHADI 299
Query: 309 FEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFE 368
EFL+LR N G E+ R +L A W+PD FM RV+S+G WSLF P + P L D WG EFE
Sbjct: 300 EEFLELRDNTGSEDRRTHNLNLANWIPDEFMRRVESDGDWSLFDPKDVPELVDLWGEEFE 359
Query: 369 RLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL--GTIKSS 426
+ Y E GKA +VV A++L+ ++++ +TG +M F D N+ NQ + + S
Sbjct: 360 KAYRDAEAAGKAARVVSARDLYGRMMRTLAQTGNGWMTFADISNRTCNQTAVPGNVVHLS 419
Query: 427 NLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLA 486
NLCTE+++ TS ETAVCNL S+ L + + G FDFE+LA
Sbjct: 420 NLCTEILEVTSDAETAVCNLGSVNLAAHCVDGG--------------------FDFERLA 459
Query: 487 EVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQL 546
L++ ID+ YYP A ++N R RPIG+G+ G+AD F L MPFDS EA++L
Sbjct: 460 RSVRTAVTFLDRSIDLTYYPTAEAEKANRRWRPIGLGLMGMADVFFKLRMPFDSAEAREL 519
Query: 547 NKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWG-VNPSDRWDWGGLRD 605
+ I ETI A TS+++AAR G + +Y + ++G+L D + +D W +R+
Sbjct: 520 SNRISETIALAAYETSADLAARLGAHPSYDDTRAARGVLHVDHFADAAVTDPDAWQRVRE 579
Query: 606 MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLT 665
+++ NG+RNSL++A PTA+ + I G +EC EP SN++ R LSGEF+ VNK+L+ DL
Sbjct: 580 LVAANGLRNSLMIAIAPTATIAAIAGCSECTEPVVSNVFKRETLSGEFIQVNKYLIADLK 639
Query: 666 EMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQ 725
+ GLW+ ++ ++ +GS+ I IP+EL+ +Y+T WE+ Q+ L+D+A R +ID SQ
Sbjct: 640 QRGLWNEKLREAVVRAEGSIADIAAIPQELRQLYRTAWELPQRALIDLAAGRTPFIDQSQ 699
Query: 726 SLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDD 785
SLN+ M P GKL+S++ +AW GLKT YYLRSR A + TV ++ P+V
Sbjct: 700 SLNLFMAAPTIGKLSSMYAYAWRSGLKT-TYYLRSRPATRINQTTVASA-----PEV--- 750
Query: 786 DDAKMAQMVCSLTNREECMAC 806
DA+ + CSL N E C AC
Sbjct: 751 -DAEAEAIACSLENPETCEAC 770
>gi|289769188|ref|ZP_06528566.1| ribonucleotide-diphosphate reductase large subunit [Streptomyces
lividans TK24]
gi|289699387|gb|EFD66816.1| ribonucleotide-diphosphate reductase large subunit [Streptomyces
lividans TK24]
Length = 794
Score = 590 bits (1522), Expect = e-166, Method: Compositional matrix adjust.
Identities = 321/801 (40%), Positives = 458/801 (57%), Gaps = 41/801 (5%)
Query: 16 DKITARLKKLSYGLS--IEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPD 73
D A L + GL+ + DP V+ G ++L ELA E AA + + P
Sbjct: 24 DGPGAALLRTLTGLTADLPGADPGRVAAAALRGRSARADEAELRELATEAAAGLISEDPV 83
Query: 74 YASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDS 133
Y+ LAAR++ + T D +G + LIAD + +A RLD+
Sbjct: 84 YSRLAARLLTIGIRAEAASQGVVTFTDSVA-----TGHREGLIADRTAAFVRLHADRLDA 138
Query: 134 EIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRVAVGIHKDDI----DSAI 187
I D D + YFG +TL YLL+ + K VE PQH L+RVA G+ +DD D
Sbjct: 139 LIDQDADDRFGYFGLRTLYSRYLLRHPITRKAVETPQHFLLRVAAGLAEDDTLRAADEVA 198
Query: 188 KTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGG 247
Y +MS+ + +SPTLFN+GT AQ+SSC+L+ D ++ +YD L + A +SK AGG
Sbjct: 199 ALYGLMSRLDYLPSSPTLFNSGTRHAQMSSCYLLDSPKDELDSLYDRLHQVARLSKHAGG 258
Query: 248 IGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHAD 307
IG++ +RA GS IRGTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WHAD
Sbjct: 259 IGIAYSRVRARGSLIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHAD 317
Query: 308 IFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEF 367
+ EFL+LR N G++ R +L A W+PD FM RV ++G WSLF P + P L D WG EF
Sbjct: 318 VEEFLELRDNTGEDARRTHNLNLAHWIPDEFMRRVDADGTWSLFSPADVPELTDLWGEEF 377
Query: 368 ERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG--TIKS 425
+ Y + E+ G A++ + A+ L+ ++++ +TG +M FKDT N+ +NQ + S
Sbjct: 378 DAAYRRAEEAGLARRTLPARELYGRMMRTLAQTGNGWMTFKDTANRTANQTATPGHVVHS 437
Query: 426 SNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKL 485
SNLCTE+++ T ETAVCNL S+ L +V M D+E+L
Sbjct: 438 SNLCTEILEVTDDGETAVCNLGSVNLGAFVDPAHGDM------------------DWERL 479
Query: 486 AEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQ 545
L++++D+N+YP E A RSN R RP+G+G GL D F L +PFDS EA+
Sbjct: 480 DATVRTAVTFLDRVVDINFYPTEQAGRSNARWRPVGLGAMGLQDVFFQLRLPFDSPEAKA 539
Query: 546 LNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRD 605
L+ I E I A TS+++A R GP + + +KG+L PD +GV P+ W LR
Sbjct: 540 LSTRIAERIMLAAYETSADLAERNGPLPAWEKTRTAKGVLHPDHYGVEPAWPERWAALRA 599
Query: 606 MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLT 665
++ G+RNSLL+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ DL
Sbjct: 600 RMATTGLRNSLLLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVDDLK 659
Query: 666 EMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQ 725
+G+W + + +GSVQ IPE+++A+Y+T WEI Q+ L+DMA R Y+D +Q
Sbjct: 660 RLGVWDARTREALREANGSVQGFTWIPEDVRALYRTAWEIPQRGLIDMAAARTPYLDQAQ 719
Query: 726 SLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDD 785
SLN+ ++ P GKL+S++ +AW +GLKT YYLRSR A + + + + D
Sbjct: 720 SLNLFLETPTIGKLSSMYAYAWKQGLKT-TYYLRSRPATRIARAAARATTVPV--QAAPD 776
Query: 786 DDAKMAQMVCSLTNREECMAC 806
+A + CSL N E C AC
Sbjct: 777 PEA----VACSLENPESCEAC 793
>gi|21223594|ref|NP_629373.1| ribonucleotide-diphosphate reductase large chain [Streptomyces
coelicolor A3(2)]
gi|8546892|emb|CAB94611.1| ribonucleotide-diphosphate reductase large chain [Streptomyces
coelicolor A3(2)]
Length = 791
Score = 590 bits (1520), Expect = e-165, Method: Compositional matrix adjust.
Identities = 320/801 (39%), Positives = 458/801 (57%), Gaps = 41/801 (5%)
Query: 16 DKITARLKKLSYGLS--IEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPD 73
D A L + GL+ + DP V+ G ++L ELA E AA + + P
Sbjct: 21 DGPGAALLRTLTGLTADLPGADPGRVAAAALRGRSARADEAELRELATEAAAGLISEDPV 80
Query: 74 YASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDS 133
Y+ LAAR++ + T D +G + LIAD + +A RLD+
Sbjct: 81 YSRLAARLLTIGIRAEAASQGVVTFTDSVA-----TGHREGLIADRTAAFVRLHADRLDA 135
Query: 134 EIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRVAVGIHKDDI----DSAI 187
I D D + YFG +TL YLL+ + K VE PQH L+RVA G+ +DD D
Sbjct: 136 LIDQDADDRFGYFGLRTLYSRYLLRHPITRKAVETPQHFLLRVAAGLAEDDTVRAADEVA 195
Query: 188 KTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGG 247
Y +MS+ + +SPTLFN+GT AQ+SSC+L+ D ++ +YD L + A +SK AGG
Sbjct: 196 ALYGLMSRLDYLPSSPTLFNSGTRHAQMSSCYLLDSPKDELDSLYDRLHQVARLSKHAGG 255
Query: 248 IGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHAD 307
IG++ +RA GS IRGTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WHAD
Sbjct: 256 IGIAYSRVRARGSLIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHAD 314
Query: 308 IFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEF 367
+ EFL+LR N G++ R +L A W+PD FM RV ++G WSLF P + P L D WG EF
Sbjct: 315 VEEFLELRDNTGEDARRTHNLNLAHWIPDEFMRRVDADGTWSLFSPADVPELTDLWGEEF 374
Query: 368 ERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG--TIKS 425
+ Y + E+ G A++ + A+ L+ ++++ +TG +M FKDT N+ +NQ + S
Sbjct: 375 DAAYRRAEEAGLARRTLPARELYGRMMRTLAQTGNGWMTFKDTANRTANQTATPGHVVHS 434
Query: 426 SNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKL 485
SNLCTE+++ T ETAVCNL S+ L +V M D+E+L
Sbjct: 435 SNLCTEILEVTDDGETAVCNLGSVNLGAFVDPAHGDM------------------DWERL 476
Query: 486 AEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQ 545
L++++D+N+YP E A RSN R RP+G+G GL D F L +PFDS EA+
Sbjct: 477 DATVRTAVTFLDRVVDINFYPTEQAGRSNARWRPVGLGAMGLQDVFFQLRLPFDSPEAKA 536
Query: 546 LNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRD 605
L+ I E I A TS+++A R GP + + ++G+L PD +GV P+ W LR
Sbjct: 537 LSTRIAERIMLAAYETSADLAERNGPLPAWEKTRTARGVLHPDHYGVEPAWPERWAALRA 596
Query: 606 MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLT 665
++ G+RNSLL+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ DL
Sbjct: 597 RMATTGLRNSLLLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVDDLK 656
Query: 666 EMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQ 725
+G+W + + +GSVQ IPE+++A+Y+T WEI Q+ L+DMA R Y+D +Q
Sbjct: 657 RLGVWDARTREALREANGSVQGFTWIPEDVRALYRTAWEIPQRGLIDMAAARTPYLDQAQ 716
Query: 726 SLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDD 785
SLN+ ++ P GKL+S++ +AW +GLKT YYLRSR A + + + + D
Sbjct: 717 SLNLFLETPTIGKLSSMYAYAWKQGLKT-TYYLRSRPATRIARAAARATTVPV--QAAPD 773
Query: 786 DDAKMAQMVCSLTNREECMAC 806
+A + CSL N E C AC
Sbjct: 774 PEA----VACSLENPESCEAC 790
>gi|398782656|ref|ZP_10546370.1| ribonucleoside-diphosphate reductase subunit alpha [Streptomyces
auratus AGR0001]
gi|396996720|gb|EJJ07706.1| ribonucleoside-diphosphate reductase subunit alpha [Streptomyces
auratus AGR0001]
Length = 800
Score = 589 bits (1519), Expect = e-165, Method: Compositional matrix adjust.
Identities = 318/791 (40%), Positives = 458/791 (57%), Gaps = 49/791 (6%)
Query: 35 DPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKK-- 92
DP V+ G + G ++L LA + AA + + P Y+ LAAR++ + +
Sbjct: 39 DPGKVAAAALRGRHAGSDEAELRSLATDAAAGLIGDEPQYSKLAARLLTLAIAEEAAGQG 98
Query: 93 --SFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDS----EIIYDRDFDYDYF 146
SFS ++ +G + LIAD+ + + + ARLD+ + D + YF
Sbjct: 99 AVSFSASVA---------TGHREGLIADETAEFVRTHEARLDALVERALADGADDRFGYF 149
Query: 147 GFKTLERSYLLK--VQGKVVERPQHMLMRVAVGIHKDD----IDSAIKTYHMMSQRWFTH 200
G +TL YLL+ +V+E PQH L+RVA G+ +D +D + Y + S +
Sbjct: 150 GLRTLHSRYLLRHPTTRQVIETPQHFLLRVACGLAEDHGERALDDVAELYRLTSSLAYLP 209
Query: 201 ASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGS 260
+SPTLFN+GT Q+SSC+L+ D ++ IYD + A +SK AGGIG+S IRA GS
Sbjct: 210 SSPTLFNSGTRHPQMSSCYLLDSPLDELDSIYDRYHQVARLSKHAGGIGLSYSRIRARGS 269
Query: 261 YIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGK 320
IRGTNG SNGIVP LR + + V+QGG +RKGA VYLE WHAD+ EFL+LR N G+
Sbjct: 270 LIRGTNGHSNGIVPFLRTLDASVAAVNQGG-RRKGAACVYLETWHADLEEFLELRDNTGE 328
Query: 321 EEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKA 380
E R +L A W+PD FM RV+++ WSLF P++AP L D WG +F+ Y + E EG+A
Sbjct: 329 EARRTHNLNIAHWIPDEFMRRVEADADWSLFSPSDAPELVDLWGEQFDAAYRRAEAEGRA 388
Query: 381 KKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQ--QNLGTIKSSNLCTEVIQYTSP 438
K + A+ L+ ++++ +TG +M FKDT N+ +NQ + + SSNLCTE+++ T+
Sbjct: 389 VKQIPARVLYSRMMRTLAQTGNGWMTFKDTANRTANQTAEPGQVVHSSNLCTEILEVTND 448
Query: 439 TETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNK 498
ETAVCNL S+ L + L G D+E+L L++
Sbjct: 449 GETAVCNLGSVNLA--------------AHLGNDAGGWEEAMDWERLDATVRTAVTFLDR 494
Query: 499 IIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHA 558
++D+N+YP E A SN R RP+G+G+ GL D F L +PFDS EAQ+L+ I E I A
Sbjct: 495 VVDINFYPTEQAGASNSRWRPVGLGLMGLQDVFFRLRLPFDSPEAQELSTRISERIMLAA 554
Query: 559 LRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRW--DWGGLRDMISKNGVRNSL 616
S+++A R GP+ + + ++G+L PD + N RW W LR I+ G+RNSL
Sbjct: 555 YEASADLAERHGPHPAWSATRTARGVLHPDHY-PNAEPRWADRWAALRSRIALTGMRNSL 613
Query: 617 LVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKN 676
L+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ +L +GLW ++
Sbjct: 614 LLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNAYLIEELKALGLWDARTRD 673
Query: 677 KIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNF 736
+ +GSVQ + IPEE++A+Y+T WEI Q+ L+DMA R Y+D SQSLN+ M P
Sbjct: 674 ALREANGSVQDVAWIPEEIRALYRTAWEIPQRALIDMAAARTPYLDQSQSLNLFMASPTI 733
Query: 737 GKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN-PKVTDDDDAKMAQMVC 795
GKL+S++ +AW RG+KT YYLRSR A + T+ P+ D +A + C
Sbjct: 734 GKLSSMYAYAWKRGIKT-TYYLRSRPATRIAQSARGTAAASAPVPQQAADPEA----VAC 788
Query: 796 SLTNREECMAC 806
SL N E C AC
Sbjct: 789 SLENPESCEAC 799
>gi|386842423|ref|YP_006247481.1| ribonucleoside-diphosphate reductase subunit alpha [Streptomyces
hygroscopicus subsp. jinggangensis 5008]
gi|374102724|gb|AEY91608.1| ribonucleoside-diphosphate reductase alpha chain [Streptomyces
hygroscopicus subsp. jinggangensis 5008]
gi|451795716|gb|AGF65765.1| ribonucleoside-diphosphate reductase alpha chain [Streptomyces
hygroscopicus subsp. jinggangensis TL01]
Length = 786
Score = 589 bits (1519), Expect = e-165, Method: Compositional matrix adjust.
Identities = 316/788 (40%), Positives = 455/788 (57%), Gaps = 48/788 (6%)
Query: 31 IEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNT 90
+ DP V+ G ++L ELA E AA + + P Y+ LAAR++ +
Sbjct: 34 LPDADPGRVAAAALRGRSARADEAELRELATEAAAGLISEDPAYSKLAARLLTLAIRDEA 93
Query: 91 KK----SFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYF 146
SF+E+I G + LIAD + + +A RLD+ + D + YF
Sbjct: 94 ASQGVSSFTESIA---------VGHREGLIADRTAEFVRLHAERLDALVDRTADDRFGYF 144
Query: 147 GFKTLERSYLLK--VQGKVVERPQHMLMRVAVGIHKDD----IDSAIKTYHMMSQRWFTH 200
G +TL YLL+ V KVVE PQH L+RVA G+ +DD +D Y +MS+ +
Sbjct: 145 GLRTLHSRYLLRHPVTRKVVETPQHFLLRVASGLAEDDTSRSVDEVAALYGLMSRLDYLP 204
Query: 201 ASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGS 260
+SPTLFN+GTP Q+S+C+L+ D ++ IYD + A +SK AGGIG+S IR+ GS
Sbjct: 205 SSPTLFNSGTPHPQMSACYLLDSPLDELDSIYDRYHQVARLSKHAGGIGLSYSRIRSRGS 264
Query: 261 YIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGK 320
IRGTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WH+DI EFL+LR N G+
Sbjct: 265 LIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTGE 323
Query: 321 EEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKA 380
+ R +L A W+PD FM RV ++ WSLF P + P L D WG +F+ Y K E G A
Sbjct: 324 DARRTHNLNLAHWIPDEFMRRVNADEQWSLFSPADVPELVDLWGEDFDAAYRKAEAAGLA 383
Query: 381 KKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQ--QNLGTIKSSNLCTEVIQYTSP 438
KK + A++L+ ++++ +TG +M FKD N+ +NQ + + SSNLCTE+++ T+
Sbjct: 384 KKTIAARDLYGRMMRTLAQTGNGWMTFKDAANRTANQTAEPGNVVHSSNLCTEILEVTND 443
Query: 439 TETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNK 498
ETAVCNL S+ L +V + + D+E+L + L++
Sbjct: 444 GETAVCNLGSVNLGAFV------------------DAASGDIDWERLDQTVRTAVTFLDR 485
Query: 499 IIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHA 558
++D+N+YP E A RSN + RP+G+G GL D F L +PFDS EA+ L+ I E I A
Sbjct: 486 VVDINFYPTEQAGRSNAKWRPVGLGAMGLQDVFFKLRLPFDSAEAKALSTRIAERIMLAA 545
Query: 559 LRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLV 618
TS+++A R GP + + ++G+L PD + V + W LR+ ++ G+RN+L++
Sbjct: 546 YETSADLAERNGPLPAWDQTRAARGVLHPDHYDVQFTWPERWAALRERVAAVGMRNALML 605
Query: 619 APMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKI 678
A PT++ + I G EC EP SN++ R LSGEF+ VN +L+ DL +G+W + +
Sbjct: 606 AIAPTSTIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVQDLKNLGVWDARTREAL 665
Query: 679 IYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGK 738
+GS+Q P IPEE +A+Y+T WEI Q+ L+DMA R Y+D QSLN+ M+ P GK
Sbjct: 666 RDSNGSIQDFPWIPEETRALYRTAWEIPQRGLIDMAAARTPYLDQGQSLNLFMETPTIGK 725
Query: 739 LTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAKMAQMVCSLT 798
L+S++ +AW GLKT YYLRSR A I +V + P D DA + CSL
Sbjct: 726 LSSMYAYAWKSGLKT-TYYLRSRPATR-IARAAQATVPAQQP--APDPDA----IACSLE 777
Query: 799 NREECMAC 806
N E C AC
Sbjct: 778 NPESCEAC 785
>gi|7328344|emb|CAB82485.1| class I ribonucleotide-diphosphate reductase large subunit chain
[Streptomyces coelicolor A3(2)]
Length = 791
Score = 588 bits (1517), Expect = e-165, Method: Compositional matrix adjust.
Identities = 319/801 (39%), Positives = 458/801 (57%), Gaps = 41/801 (5%)
Query: 16 DKITARLKKLSYGLS--IEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPD 73
D A L + GL+ + DP V+ G ++L ELA E AA + + P
Sbjct: 21 DGPGAALLRTLTGLTADLPGADPGRVAAAALRGRSARADEAELRELATEAAAGLISEDPV 80
Query: 74 YASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDS 133
Y+ LAAR++ + T D +G + LIAD + +A RLD+
Sbjct: 81 YSRLAARLLTIGIRAEAASQGVVTFTDSVA-----TGHREGLIADRTAAFVRLHADRLDA 135
Query: 134 EIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRVAVGIHKDDI----DSAI 187
I D D + YFG +TL YLL+ + K VE PQH L+RVA G+ +DD D
Sbjct: 136 LIDQDADDRFGYFGLRTLYSRYLLRHPITRKAVETPQHFLLRVAAGLAEDDTVRAADEVA 195
Query: 188 KTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGG 247
Y +MS+ + +SPTLFN+GT AQ+SSC+L+ D ++ +YD L + A +SK AGG
Sbjct: 196 ALYGLMSRLDYLPSSPTLFNSGTRHAQMSSCYLLDSPKDELDSLYDRLHQVARLSKHAGG 255
Query: 248 IGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHAD 307
IG++ +RA GS IRGTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WHAD
Sbjct: 256 IGIAYSRVRARGSLIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHAD 314
Query: 308 IFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEF 367
+ EFL+LR N G++ R +L A W+PD FM RV ++G WSLF P + P L D WG EF
Sbjct: 315 VEEFLELRDNTGEDARRTHNLNLAHWIPDEFMRRVDADGTWSLFSPADVPELTDLWGEEF 374
Query: 368 ERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG--TIKS 425
+ Y + E+ G A++ + A+ L+ ++++ +TG +M FKDT N+ +NQ + S
Sbjct: 375 DAAYRRAEEAGLARRTLPARELYGRMMRTLAQTGNGWMTFKDTANRTANQTATPGHVVHS 434
Query: 426 SNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKL 485
SNLCTE+++ T ETAVCNL S+ L +V M D+E+L
Sbjct: 435 SNLCTEILEVTDDGETAVCNLGSVNLGAFVDPAHGDM------------------DWERL 476
Query: 486 AEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQ 545
L++++D+N+YP E A RSN R RP+G+G GL D F L +PFDS EA+
Sbjct: 477 DATVRTAVTFLDRVVDINFYPTEQAGRSNARWRPVGLGAMGLQDVFFQLRLPFDSPEAKA 536
Query: 546 LNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRD 605
L+ I E I A TS+++A R GP + + ++G+L PD +GV P+ W LR
Sbjct: 537 LSTRIAERIMLAAYETSADLAERNGPLPAWEKTRTARGVLHPDHYGVEPAWPERWAALRA 596
Query: 606 MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLT 665
++ G+RNS+L+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ DL
Sbjct: 597 RMATTGLRNSMLLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVDDLK 656
Query: 666 EMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQ 725
+G+W + + +GSVQ IPE+++A+Y+T WEI Q+ L+DMA R Y+D +Q
Sbjct: 657 RLGVWDARTREALREANGSVQGFTWIPEDVRALYRTAWEIPQRGLIDMAAARTPYLDQAQ 716
Query: 726 SLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDD 785
SLN+ ++ P GKL+S++ +AW +GLKT YYLRSR A + + + + D
Sbjct: 717 SLNLFLETPTIGKLSSMYAYAWKQGLKT-TYYLRSRPATRIARAAARATTVPV--QAAPD 773
Query: 786 DDAKMAQMVCSLTNREECMAC 806
+A + CSL N E C AC
Sbjct: 774 PEA----VACSLENPESCEAC 790
>gi|290957505|ref|YP_003488687.1| ribonucleotide-diphosphate reductase large chain [Streptomyces
scabiei 87.22]
gi|260647031|emb|CBG70130.1| ribonucleotide-diphosphate reductase large chain [Streptomyces
scabiei 87.22]
Length = 802
Score = 588 bits (1516), Expect = e-165, Method: Compositional matrix adjust.
Identities = 315/794 (39%), Positives = 456/794 (57%), Gaps = 46/794 (5%)
Query: 29 LSIEHCDPVLVSQKVCTGVYKGVTTSQ----LDELAAETAAAMTTNHPDYASLAARIVVS 84
+ + DP V+ G T++ L ELA E AA + + P Y+ LAAR++
Sbjct: 38 VDLPDADPGRVAAAALRGRSSRAATAEMVAELRELATEAAAGLISEDPAYSKLAARLLAI 97
Query: 85 NLHKNTKK----SFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRD 140
+ +F+E+I G + L+AD + + + ARLD+ + D
Sbjct: 98 GIRAEAASQGVTTFTESIA---------VGHREGLVADRTAEFVRVHGARLDALVDPAGD 148
Query: 141 FDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRVAVGIHKDD----IDSAIKTYHMMS 194
+ YFG +TL YLL+ + KVVE PQH ++RVA G+ +DD +D Y +MS
Sbjct: 149 DRFGYFGLRTLHSRYLLRHPLTRKVVETPQHFMLRVASGLAEDDTPRAVDEVSALYGLMS 208
Query: 195 QRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHN 254
+ + +SPTLFN+GT Q+SSC+L+ D ++ IYD + A +SK AGGIG+S
Sbjct: 209 RLDYLPSSPTLFNSGTRHPQMSSCYLLDSPLDELDSIYDRYHQVARLSKHAGGIGLSYSR 268
Query: 255 IRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDL 314
IR+ GS IRGTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WH+DI EFL+L
Sbjct: 269 IRSRGSLIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHSDIEEFLEL 327
Query: 315 RKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKY 374
R N G++ R +L A W+PD FM RV ++ WSLF P + P L D WG EFE Y K
Sbjct: 328 RDNTGEDARRTHNLNLAHWIPDEFMRRVNADEQWSLFSPADVPELVDLWGEEFEAAYRKA 387
Query: 375 EKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQ--QNLGTIKSSNLCTEV 432
E G A+K + A++L+ ++++ +TG +M FKD N+ +NQ + + SSNLCTE+
Sbjct: 388 EANGLARKTIAARDLYGRMMRTLAQTGNGWMTFKDAANRTANQTAEPGHVVHSSNLCTEI 447
Query: 433 IQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIV 492
++ T ETAVCNL S+ L +V R + + D+E+L E
Sbjct: 448 LEVTDDGETAVCNLGSVNLGAFV----------------DRAAGD--LDWERLDETVRTA 489
Query: 493 TENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFE 552
L++++D+N+YP E A RSN R RP+G+G GL D F L +PFDS EA+ L+ I E
Sbjct: 490 VTFLDRVVDINFYPTEQAGRSNARWRPVGLGAMGLQDVFFQLRLPFDSPEAKALSTRIAE 549
Query: 553 TIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGV 612
I A S+++A R GP + + ++G+L PD +GV P+ W LR+ ++ G+
Sbjct: 550 RIMLAAYEASADLAERNGPLPAWEKTRTARGVLHPDHYGVEPAWSERWAALRERVAATGM 609
Query: 613 RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSP 672
RN+LL+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ DL E+G+W
Sbjct: 610 RNALLLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVRDLKELGVWDA 669
Query: 673 IIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMD 732
+ + +GSVQ IP +++A+Y+T WEI Q+ L+DMA R Y+D SQSLN+ ++
Sbjct: 670 RTREALRDSNGSVQDFAWIPADVRALYRTAWEIPQRGLIDMAAARTPYLDQSQSLNLFLE 729
Query: 733 QPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAKMAQ 792
P GKL+S++ +AW GLKT YYLRSR A + + E ++ A
Sbjct: 730 TPTIGKLSSMYAYAWKSGLKT-TYYLRSRPATRIARAAQGQARQPETTVPVQQATSEEA- 787
Query: 793 MVCSLTNREECMAC 806
+ CSL N E C AC
Sbjct: 788 LACSLENPESCEAC 801
>gi|358457764|ref|ZP_09167980.1| ribonucleoside-diphosphate reductase, alpha subunit [Frankia sp.
CN3]
gi|357079044|gb|EHI88487.1| ribonucleoside-diphosphate reductase, alpha subunit [Frankia sp.
CN3]
Length = 837
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 328/820 (40%), Positives = 470/820 (57%), Gaps = 34/820 (4%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V R G E V I + + + L + DP+ V+ + G+Y GV+ +LD+LA
Sbjct: 37 MRVRHRGGTLEPVDVSGIADAVARRADDL--DRVDPLRVASRTIGGLYDGVSAEELDKLA 94
Query: 61 AETAAAMTTNHPDYASLAARI----VVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLI 116
+TAA + P Y+ LAAR+ + + SFSE + + G + LI
Sbjct: 95 VQTAADLIGEEPQYSRLAARLLAALIADEVAGQGITSFSEGVAN---------GHRLGLI 145
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGK--VVERPQHMLMRV 174
D + +AA LD+ I D D ++YFG +T+ YLL+ VVE PQ L+RV
Sbjct: 146 GDPTAAFVAAHAAELDALIDPDADRAFEYFGIRTVADRYLLRHPRTRLVVETPQRWLLRV 205
Query: 175 AVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
A G+ D + A + Y +M+ + +SPTLFNAGT Q+SSCFLV D +E IY+
Sbjct: 206 ACGLSHD-VAEAAELYRLMASLAYLPSSPTLFNAGTAHPQMSSCFLVDSPRDELESIYER 264
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK AGGIG+ +R+ G+ IRGTNG SNGIVP LR + + V+QGG +RK
Sbjct: 265 YSQVARLSKFAGGIGIGFSRVRSRGALIRGTNGRSNGIVPWLRTLDASVAAVNQGG-RRK 323
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA VYLEPWH DI EFL+LR N G++ R +L A W+PD FM RV+++ WSL P+
Sbjct: 324 GAACVYLEPWHPDIEEFLELRDNTGEDARRTHNLSLAHWIPDEFMRRVRADESWSLMDPD 383
Query: 355 EAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKK 414
E P L D WG EF+R Y E G+ + + A++L+ ++++ +TG +M FKD N+
Sbjct: 384 EVPELTDLWGDEFDRAYRAAETAGRYVRQLPARDLYARMMRTLAQTGNGWMTFKDAANRT 443
Query: 415 SNQ--QNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREM----GVPMESH--P 466
NQ + I SNLCTE+++ TS ETAVCNL S+ L R++ G P S P
Sbjct: 444 GNQTAEPGNVIHLSNLCTEILEVTSDAETAVCNLGSVNLARHLLAPRLADGDPSTSSTAP 503
Query: 467 SKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQG 526
+ G R D+ L L+++ID+NYYP A SN R RP+G+GV G
Sbjct: 504 TADPGGR------IDWAMLRATVRTAVTFLDRVIDINYYPTGEAAASNPRWRPVGLGVMG 557
Query: 527 LADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQ 586
L D F L +PFDS A++L+ + E I AL S E+A GP+ + + ++G+L
Sbjct: 558 LQDVFFALRLPFDSAAARELSTRLSEEIVLTALERSVELAREHGPHPAFAQTRAARGVLH 617
Query: 587 PDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSR 646
PD + V PS W LR I ++G+RN LL+A PTA+ + I G EC EP SN++ R
Sbjct: 618 PDHFDVTPSQPARWAALRADIVEHGLRNCLLIAIAPTATIASIAGCYECIEPQVSNVFKR 677
Query: 647 RVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIK 706
LSGEF+ +N +L+ +L GLW+ ++ +I +GSVQ+I ++P++L+ +++T WE+
Sbjct: 678 ETLSGEFLQINSYLVEELRGRGLWTAPVRERIRAAEGSVQEIGELPDDLRVLFRTAWELP 737
Query: 707 QKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADA 766
Q+ L+D+A R YID SQSLN+ M PN G+L+S++ +AW GLKT YYLRSR A
Sbjct: 738 QRALIDLAAARTPYIDQSQSLNLFMADPNIGRLSSMYSYAWSSGLKT-TYYLRSRPATRI 796
Query: 767 IKFTVDTSVLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
+ TV + + T D + A + CSL N E C AC
Sbjct: 797 QQATVTAATHTIPTQETPRDGEEAAAVACSLENPEICEAC 836
>gi|443624322|ref|ZP_21108796.1| putative Ribonucleoside-diphosphate reductase [Streptomyces
viridochromogenes Tue57]
gi|443342236|gb|ELS56404.1| putative Ribonucleoside-diphosphate reductase [Streptomyces
viridochromogenes Tue57]
Length = 776
Score = 584 bits (1506), Expect = e-164, Method: Compositional matrix adjust.
Identities = 315/788 (39%), Positives = 456/788 (57%), Gaps = 51/788 (6%)
Query: 34 CDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKK- 92
DP V+ G ++L ELA E AA + + P Y+ LAAR++ ++
Sbjct: 24 ADPGRVAAAALRGRSARADETELRELATEAAAGLISEDPAYSRLAARLLTISIAAEAASQ 83
Query: 93 ---SFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFK 149
SF+E++ G + LIAD + + +AARLD+ I D + YFG +
Sbjct: 84 GVTSFTESVA---------VGHREGLIADRTAEFVRVHAARLDALIDTGADDRFGYFGLR 134
Query: 150 TLERSYLLK--VQGKVVERPQHMLMRVAVGIHKDD----IDSAIKTYHMMSQRWFTHASP 203
TL YLL+ + KV+E PQH ++RVA G+ +DD +D Y +MS+ + +SP
Sbjct: 135 TLHSRYLLRHPLTRKVIETPQHFMLRVAAGLAEDDTARSVDEVAALYGLMSRLDYLPSSP 194
Query: 204 TLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT Q+SSC+L+ D ++ IYD + A +SK AGGIG+S IR+ GS IR
Sbjct: 195 TLFNSGTRHPQMSSCYLLDSPKDELDSIYDRYHQVARLSKHAGGIGLSYSRIRSRGSLIR 254
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEH 323
GTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WH+DI EFL+LR N G++
Sbjct: 255 GTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTGEDAR 313
Query: 324 RARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKV 383
R +L A WVPD FM RV ++G WSLF P + P L D WG EF+ Y K E+ G A+K
Sbjct: 314 RTHNLNLAHWVPDEFMRRVNADGQWSLFSPADVPELVDLWGEEFDAAYRKAEEAGLARKT 373
Query: 384 VQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG--TIKSSNLCTEVIQYTSPTET 441
+ A++L+ ++++ +TG +M FKD N+ +NQ L + SSNLCTE+++ T ET
Sbjct: 374 IPARDLYGRMMRTLAQTGNGWMTFKDAANRTANQTALPGHVVHSSNLCTEILEVTDDGET 433
Query: 442 AVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIID 501
AVCNL S+ L +V P++ + D+E+L L++++D
Sbjct: 434 AVCNLGSVNLGAFV---------DPAR---------QDIDWERLDATVRTAVTFLDRVVD 475
Query: 502 VNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRT 561
+N+YP E A RSN + RP+G+G GL D F L +PFDS EA++L+ I E I A
Sbjct: 476 INFYPTEQAGRSNAKWRPVGLGAMGLQDVFFKLRLPFDSAEAKRLSTRIAERIMLAAYEA 535
Query: 562 SSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPM 621
S+++A R GP + + ++G+L PD + V + W LR I+ G+RNSLL+A
Sbjct: 536 SADLAERGGPLPAWEKTRTARGVLHPDHYDVELTWPERWAALRSRIATTGMRNSLLLAIA 595
Query: 622 PTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYD 681
PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ +L +G+W + +
Sbjct: 596 PTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVDELKALGVWDARTREALRES 655
Query: 682 DGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTS 741
+GSVQ IP +++A+Y+T WEI Q+ L+DMA R ++D SQSLN+ M+ P GKL+S
Sbjct: 656 NGSVQDFAWIPADVRALYRTAWEIPQRGLIDMAAARTPFLDQSQSLNLFMETPTIGKLSS 715
Query: 742 LHFHAWLRGLKTGMYYLRSRAAA---DAIKFTVDTSVLKENPKVTDDDDAKMAQMVCSLT 798
++ +AW +GLKT YYLRSR A A + ++ + P D + CSL
Sbjct: 716 MYAYAWKQGLKT-TYYLRSRPATRIARAAQAQAQATIPVQQPAPED-------AVACSLE 767
Query: 799 NREECMAC 806
N E C AC
Sbjct: 768 NPESCEAC 775
>gi|440698861|ref|ZP_20881183.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
turgidiscabies Car8]
gi|440278673|gb|ELP66667.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
turgidiscabies Car8]
Length = 788
Score = 584 bits (1505), Expect = e-164, Method: Compositional matrix adjust.
Identities = 317/801 (39%), Positives = 461/801 (57%), Gaps = 50/801 (6%)
Query: 19 TARLKKLS-YGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASL 77
TA L+ L+ + DP V+ G S+L ELA E AA + + P Y+ L
Sbjct: 24 TALLRTLTELTADLPDADPGRVAAAALRGRSARADVSELRELATEAAAGLISEDPAYSRL 83
Query: 78 AARI----VVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDS 133
AAR+ V + +FSE++ G + LIAD + + + RLD+
Sbjct: 84 AARLLTVTVAAEAASQGVTTFSESVA---------VGHREGLIADRTAEFVRLHTDRLDA 134
Query: 134 EIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRVAVGIHKDD----IDSAI 187
I D D + YFG +TL YLL+ + +V+E PQH ++RVA G+ +DD +D
Sbjct: 135 LIDVDGDDRFGYFGLRTLHSRYLLRHPITRRVIETPQHFMLRVASGLAEDDTVRALDEVA 194
Query: 188 KTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGG 247
Y +MS+ + +SPTLFN+GT Q+SSC+L+ D ++ IYD + A +SK AGG
Sbjct: 195 ALYRLMSRLDYLPSSPTLFNSGTRHPQMSSCYLLDSPLDELDSIYDRYHQVARLSKHAGG 254
Query: 248 IGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHAD 307
IG+S IR+ GS IRGTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WH+D
Sbjct: 255 IGLSYSRIRSRGSLIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHSD 313
Query: 308 IFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEF 367
I EFL+LR N G++ R +L A W+PD FM RV S+ LWSLF P++ P L D WG EF
Sbjct: 314 IEEFLELRDNTGEDARRTHNLNLAHWIPDEFMRRVDSDALWSLFSPSDVPELVDLWGAEF 373
Query: 368 ERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQ--QNLGTIKS 425
+ Y E+ G A+K + A++L+ ++++ +TG +M FKD N+ +NQ + + S
Sbjct: 374 DAAYRAAEEAGLARKTIPARDLYGRMMRTLAQTGNGWMTFKDAANRTANQTAEPGSVVHS 433
Query: 426 SNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKL 485
SNLCTE+++ T ETAVCNL S+ L +V + D+E+L
Sbjct: 434 SNLCTEILEVTDDGETAVCNLGSVNLGAFV------------------DTAAGDIDWERL 475
Query: 486 AEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQ 545
E L++++D+N+YP E A RSN R RP+G+G GL D F L +PFDS EA+
Sbjct: 476 DETVRTAVTFLDRVVDINFYPTEQAGRSNSRWRPVGLGAMGLQDVFFQLRVPFDSPEARA 535
Query: 546 LNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRD 605
L+ I E + A S+++A R GP + + ++G+L PD + V + W LR+
Sbjct: 536 LSTRIAERVMLAAYEASADLAERNGPLPAWEKTRTARGVLHPDHYDVELNWPERWSALRE 595
Query: 606 MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLT 665
I++ G+RNSLL+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ +L
Sbjct: 596 RIAEVGMRNSLLLAVAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVRELK 655
Query: 666 EMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQ 725
++G+W + + +GSVQ IP +++A+Y+T WEI Q+ L+DMA R ++D SQ
Sbjct: 656 DLGVWDARTREALRESNGSVQDFAWIPADVRALYRTAWEIPQRGLIDMAAARTPFLDQSQ 715
Query: 726 SLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDD 785
SLN+ ++ P GKL+S++ +AW GLKT YYLRSR A + T +++ D
Sbjct: 716 SLNLFLETPTIGKLSSMYAYAWKSGLKT-TYYLRSRPATRIARAAQATVPVQQ----AAD 770
Query: 786 DDAKMAQMVCSLTNREECMAC 806
DA + CSL N E C AC
Sbjct: 771 PDA----VACSLENPESCEAC 787
>gi|302542645|ref|ZP_07294987.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
hygroscopicus ATCC 53653]
gi|302460263|gb|EFL23356.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
himastatinicus ATCC 53653]
Length = 804
Score = 582 bits (1500), Expect = e-163, Method: Compositional matrix adjust.
Identities = 327/815 (40%), Positives = 464/815 (56%), Gaps = 62/815 (7%)
Query: 19 TARLKKLSYGLS--IEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYAS 76
TA L+ L+ GL+ + DP V+ G + G ++L LA E AA + P+Y+
Sbjct: 24 TALLRTLT-GLTADLPATDPGKVAAAALRGRHPGSDEAELRSLATEAAAGLIGEEPEYSK 82
Query: 77 LAARIVVSNLHKNTK----KSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLD 132
LAAR++ + SFS ++ G + LIAD + + + ARLD
Sbjct: 83 LAARLLTRAIADEAAGQGADSFSASVA---------VGHREGLIADSTAEFVTAHTARLD 133
Query: 133 SEIIYDR------DFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRVAVGIHKD--- 181
+ + DR D + YFG +TL YLL+ + +V+E PQH L+RVA G+ +D
Sbjct: 134 A--LVDRALADGADDRFGYFGLRTLHSRYLLRHPITRQVIETPQHFLLRVACGLAEDLSE 191
Query: 182 -DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
+D + Y M S + +SPTLFN+GT Q+SSC+L+ D ++ IY+ + A
Sbjct: 192 RALDDVAELYRMTSTLSYLPSSPTLFNSGTRHPQMSSCYLLDSPLDELDSIYNRYHQVAR 251
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
+SK AGGIG+S IRA GS IRGTNG SNGIVP LR + + V+QGG +RKGA VY
Sbjct: 252 LSKHAGGIGLSYSRIRARGSLIRGTNGHSNGIVPFLRTLDASVAAVNQGG-RRKGAACVY 310
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LE WHADI EFL+LR N G+E R +L A W+PD FM RV+++G WSLF P +AP L
Sbjct: 311 LETWHADIEEFLELRDNTGEEARRTHNLNVAHWIPDEFMRRVEADGDWSLFSPVDAPELV 370
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL 420
D WG EF+ Y K E EG+A K V A+ L+ ++++ +TG +M FKD N+ +NQ
Sbjct: 371 DLWGEEFDAAYRKAEAEGRALKQVPARQLYSRMMRTLAQTGNGWMTFKDAANRTANQTAE 430
Query: 421 G--TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNR 478
+ SSNLCTE+++ T ETAVCNL S+ L ++ E G
Sbjct: 431 AGRVVHSSNLCTEILEVTDDGETAVCNLGSVNLSAHLGEDG------------------- 471
Query: 479 YFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPF 538
D+E+L L++++D+N+YP E A SN R RP+G+G+ GL D F L +PF
Sbjct: 472 EMDWERLDRTVRTAVTFLDRVVDINFYPTEEAGASNSRWRPVGLGLMGLQDVFFRLRLPF 531
Query: 539 DSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMW-GVNPSDR 597
DS EAQ L+ I E I A S ++A R GP+ + + ++G+L PD + G +
Sbjct: 532 DSPEAQALSTRISERIMLAAYEASCDLAERHGPHPAWAETRTARGVLHPDHYTGAQAAWP 591
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
W LR ++ G+RNSLL+A PTA+ + I G EC EP SN++ R LSGEF+ VN
Sbjct: 592 ERWEALRTRMATTGMRNSLLLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVN 651
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
+L++DL ++G+W ++ + +GSVQ + +P++++ +Y+T WEI Q+ L+DMA R
Sbjct: 652 NYLVNDLKKLGVWDTQTRDALREANGSVQDLSWVPQDVRDLYRTAWEIPQRALIDMAAAR 711
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAA------ADAIKFTV 771
Y+D SQSLN+ M P GKL+S++ +AW RG+KT YYLRSR A A T
Sbjct: 712 TPYLDQSQSLNLFMAAPTIGKLSSMYAYAWKRGIKT-TYYLRSRPATRIAQSARGGAATA 770
Query: 772 DTSVLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
T V P D+A + CSL N E C AC
Sbjct: 771 TTPVPAPVPAQQTPDEADA--VACSLENPESCEAC 803
>gi|302558497|ref|ZP_07310839.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
griseoflavus Tu4000]
gi|302476115|gb|EFL39208.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
griseoflavus Tu4000]
Length = 796
Score = 582 bits (1500), Expect = e-163, Method: Compositional matrix adjust.
Identities = 317/785 (40%), Positives = 448/785 (57%), Gaps = 48/785 (6%)
Query: 34 CDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKK- 92
DP V+ G ++L ELA E AA + + P Y+ LAAR++ +
Sbjct: 47 ADPGRVAAAALRGRSARADEAELRELATEAAAGLISEDPAYSRLAARLLTIGIRAEAASQ 106
Query: 93 ---SFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFK 149
SF+ ++ +G + LIAD + +A RLD+ + D + YFG +
Sbjct: 107 GVTSFTGSVA---------TGHREGLIADRTAAFVRLHAERLDALVDTRADDRFGYFGLR 157
Query: 150 TLERSYLLK--VQGKVVERPQHMLMRVAVGIHKDD----IDSAIKTYHMMSQRWFTHASP 203
TL YLL+ V KVVE PQH L+RVA G+ +DD +D Y +MS+ + +SP
Sbjct: 158 TLHSRYLLRHPVTRKVVETPQHFLLRVAAGLAEDDGARSVDEVAALYGLMSRLDYLPSSP 217
Query: 204 TLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT Q+SSC+L+ D ++ IYD + A +SK AGGIG+S IRA GS IR
Sbjct: 218 TLFNSGTRHPQMSSCYLLDSPQDELDSIYDRYHQVARLSKHAGGIGLSYSRIRARGSLIR 277
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEH 323
GTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WH+DI EFL+LR N G++
Sbjct: 278 GTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTGEDAR 336
Query: 324 RARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKV 383
R +L A WVPD FM RV ++ WSLF P + PGL D WG EF+ Y E +G A++
Sbjct: 337 RTHNLNLAHWVPDEFMRRVDADAPWSLFSPADVPGLVDLWGEEFDAAYRAAEAQGLARRT 396
Query: 384 VQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQ--QNLGTIKSSNLCTEVIQYTSPTET 441
+ A+ L+ ++++ +TG +M FKDT N+ +NQ + + SSNLCTE+++ T ET
Sbjct: 397 LPARELYGRMMRTLAQTGNGWMTFKDTANRTANQTAEPGHVVHSSNLCTEILEVTDDGET 456
Query: 442 AVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIID 501
AVCNL S+ L +V + + D+E+L E L++++D
Sbjct: 457 AVCNLGSVNLGAFVDQAAGDL------------------DWERLDETVRTAVTFLDRVVD 498
Query: 502 VNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRT 561
+NYYP E A RSN R RP+G+G GL D L +PFDS EA+ L+ I E I A T
Sbjct: 499 INYYPTEQAGRSNARWRPVGLGAMGLQDVLFRLRLPFDSPEAKALSTRIAERIMLAAYET 558
Query: 562 SSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPM 621
S+++A R GP + + ++G+L PD + + W LR I+ G+RNSLL+A
Sbjct: 559 SADLAERSGPLPAWEKTRTARGVLHPDHYDTELTWPERWAALRARIAAVGMRNSLLLAIA 618
Query: 622 PTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYD 681
PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ DL +G+W + +
Sbjct: 619 PTATIASIAGAYECIEPQVSNLFKRETLSGEFLQVNSYLVEDLKRLGVWDARTREALREA 678
Query: 682 DGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTS 741
GSVQ IPE+++ +Y+T WEI Q+ L+DMA R ++D +QSLN+ ++ P GKL+S
Sbjct: 679 GGSVQDFAWIPEDVRRLYRTAWEIPQRGLIDMAAARTPFLDQAQSLNLFLETPTIGKLSS 738
Query: 742 LHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAKMAQMVCSLTNRE 801
++ HAW +GLKT YYLRSR A + T+V P D +A CSL N E
Sbjct: 739 MYVHAWKQGLKT-TYYLRSRPATRIARAAARTTV----PVQAGPDPEAVA---CSLENPE 790
Query: 802 ECMAC 806
C AC
Sbjct: 791 SCEAC 795
>gi|86261680|emb|CAC17629.2| class I ribonucleotide-diphosphate reductase large subunit chain
[Streptomyces jumonjinensis]
Length = 811
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 314/805 (39%), Positives = 462/805 (57%), Gaps = 54/805 (6%)
Query: 19 TARLKKLS-YGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASL 77
TA L+ L+ + DP V+ G + G ++L LA + AA + + P Y+ L
Sbjct: 43 TALLRTLTDLTADLPDTDPGRVAAAALRGRHAGSDAAELRGLATDAAAGLISEDPAYSRL 102
Query: 78 AARIVVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDS 133
AAR++ + + SFS ++ G LIAD + +AARLD+
Sbjct: 103 AARLLTRTIADEAEGQGAVSFSASVA---------VGFAEGLIADRTAAFVTLHAARLDA 153
Query: 134 EIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRVAVGIHKDD----IDSAI 187
I D + YFG +TL YLL+ + +V+E PQH ++RVA G+ +DD +D
Sbjct: 154 LIDPAADDRFGYFGLRTLYSRYLLRHPITRQVIETPQHFMLRVACGLAEDDSTRALDEVA 213
Query: 188 KTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGG 247
Y +MS+ + +SPTLFN+GT Q+SSC+L+ D ++ IYD + A +SK AGG
Sbjct: 214 ALYRLMSRLDYLPSSPTLFNSGTRHPQMSSCYLLDSPLDELDSIYDRYHQVARLSKHAGG 273
Query: 248 IGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHAD 307
IG+S +RA GS IRGTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WHAD
Sbjct: 274 IGLSYSRVRARGSLIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHAD 332
Query: 308 IFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEF 367
+ EFL+LR N G++ R +L A W+PD FM RV+++ WSLF P++ P L D WG +F
Sbjct: 333 VEEFLELRDNTGEDARRTHNLNLAHWIPDEFMRRVEADTAWSLFSPSDVPELVDLWGDDF 392
Query: 368 ERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG--TIKS 425
+ Y + E G A+K + A+ L+ ++++ +TG +M FKD N+ +NQ L T+ S
Sbjct: 393 DTAYRRAEAAGLARKTMPARELYGRMMRTLAQTGNGWMTFKDASNRTANQTALPGRTVHS 452
Query: 426 SNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKL 485
SNLCTE+++ T ETAVCNL S+ L +V + + D+E+L
Sbjct: 453 SNLCTEILEVTDDAETAVCNLGSVNLAAFVTQDDI--------------------DWERL 492
Query: 486 AEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQ 545
L++++D+N+YP E A RSN R RP+G+G GL D F L +PFDS A+
Sbjct: 493 DATVRTAVTFLDRVVDINFYPTEQAGRSNNRWRPVGLGAMGLQDVFFQLKLPFDSPAART 552
Query: 546 LNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP--SDRWDWGGL 603
L+ I E I A S+++A R GP ++ + + G+L PD + P DRW+ L
Sbjct: 553 LSTRIAERIMLAAYEASADLAERHGPLPAWNETRTAHGVLHPDHYNTTPHWPDRWN--AL 610
Query: 604 RDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHD 663
R+ I+ G+RNSLL+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ +
Sbjct: 611 RERIAATGLRNSLLLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNTYLVQE 670
Query: 664 LTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDH 723
L +G+W + + +GS+Q Q+P +++ +Y+T WEI Q+ L+DMA R Y+D
Sbjct: 671 LKNLGVWDATTREALRDANGSIQNFTQVPADVRELYRTAWEIPQRGLIDMAAARTPYLDQ 730
Query: 724 SQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTS--VLKENPK 781
SQSLN+ ++ P GKL+S++ +AW +G+KT YYLRSR A + +T+ P
Sbjct: 731 SQSLNLFLETPTIGKLSSMYAYAWKQGIKT-TYYLRSRPATRIARAASNTNAGATVPVPA 789
Query: 782 VTDDDDAKMAQMVCSLTNREECMAC 806
T +DA + CSL N E C AC
Sbjct: 790 QTTPEDA----VACSLENPESCEAC 810
>gi|395771543|ref|ZP_10452058.1| ribonucleoside-diphosphate reductase subunit alpha [Streptomyces
acidiscabies 84-104]
Length = 788
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 315/801 (39%), Positives = 459/801 (57%), Gaps = 50/801 (6%)
Query: 19 TARLKKLS-YGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASL 77
TA L+ L+ + DP V+ G ++L ELA E AA + + P Y+ L
Sbjct: 24 TALLRTLTELTADLPDADPGRVAAAALRGRSARADEAELRELATEAAAGLISEDPAYSRL 83
Query: 78 AARIVVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDS 133
AAR++ ++ +F+E++ G + LIAD + +A L+
Sbjct: 84 AARLLTISIRAEAASQSVTTFTESVS---------VGHREGLIADRTAEFARLHATALNG 134
Query: 134 EIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRVAVGIHKDD----IDSAI 187
+ D + YFG +TL YLL+ + KV+E PQH L+RVA G+ +DD +D
Sbjct: 135 LLDPAADDRFGYFGLRTLHSRYLLRHPITRKVIETPQHFLLRVASGLAEDDTVRALDEVA 194
Query: 188 KTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGG 247
Y +MS+ + +SPTLFN+GT Q+SSC+L+ D ++ IYD + A +SK AGG
Sbjct: 195 ALYRLMSRLDYLPSSPTLFNSGTRHPQMSSCYLLDSPKDELDSIYDRYHQVARLSKHAGG 254
Query: 248 IGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHAD 307
IG+S IR+ GS IRGTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WH+D
Sbjct: 255 IGLSYSRIRSRGSLIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHSD 313
Query: 308 IFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEF 367
I EFL+LR N G++ R +L A W+PD FM RV ++ WSLF P++ P L D WG EF
Sbjct: 314 IEEFLELRDNTGEDARRTHNLNLAHWIPDEFMRRVNADAEWSLFSPSDVPELVDLWGDEF 373
Query: 368 ERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQ--QNLGTIKS 425
+ Y E +G AKK + A++L+ ++++ +TG +M FKD N+ +NQ + + S
Sbjct: 374 DAAYRAAEAKGLAKKTIPARDLYGRMMRTLAQTGNGWMTFKDAANRTANQTAEPGHVVHS 433
Query: 426 SNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKL 485
SNLCTE+++ T ETAVCNL S+ L +V ++ D+E+L
Sbjct: 434 SNLCTEILEVTDDGETAVCNLGSVNLGAFV------------------DPASQDIDWERL 475
Query: 486 AEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQ 545
E L++++D+N+YP E A RSN R RP+G+G GL D F L +PFDS EA++
Sbjct: 476 DETVRTAVTFLDRVVDINFYPTEQAGRSNSRWRPVGLGAMGLQDVFFKLRIPFDSPEAKE 535
Query: 546 LNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRD 605
L+ I E I A S+ +A R GP + + ++G+L PD +GV + W LR+
Sbjct: 536 LSTRIAERIMLAAYEASATLAERSGPLPAWEKTRTARGVLHPDHFGVEFTWPERWAALRE 595
Query: 606 MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLT 665
I+ G+RNSLL+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ DL
Sbjct: 596 RIASTGLRNSLLLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVQDLK 655
Query: 666 EMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQ 725
++G+W + + +GSVQ IP +++A+Y+T WEI Q+ L+DMA R Y+D +Q
Sbjct: 656 DLGVWDARTREALREANGSVQDFGWIPADVRALYRTAWEIPQRGLIDMAAARTPYLDQAQ 715
Query: 726 SLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDD 785
SLN+ ++ P GKL+S++ +AW GLKT YYLRSR A + + ++ P D
Sbjct: 716 SLNLFLETPTIGKLSSMYAYAWKSGLKT-TYYLRSRPATRIARAAQASVPVQATP----D 770
Query: 786 DDAKMAQMVCSLTNREECMAC 806
DA + CSL N E C AC
Sbjct: 771 PDA----VACSLENPESCEAC 787
>gi|359149119|ref|ZP_09182183.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
sp. S4]
Length = 791
Score = 580 bits (1496), Expect = e-163, Method: Compositional matrix adjust.
Identities = 309/784 (39%), Positives = 448/784 (57%), Gaps = 45/784 (5%)
Query: 35 DPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTK--- 91
DP V+ G ++L LA E AA + + P Y+ LAAR++ + +
Sbjct: 40 DPGRVAAAALRGRNAASDEAELRSLATEAAAGLISEDPAYSRLAARLLTRTIAEEAAGQG 99
Query: 92 -KSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKT 150
+F+E++ +G + LIAD + +A RLD+ + D + YFG +T
Sbjct: 100 VTTFTESVA---------TGHREGLIADRTAAFVTAHAERLDALVDPAADDRFGYFGLRT 150
Query: 151 LERSYLLKV--QGKVVERPQHMLMRVAVGIHKDD----IDSAIKTYHMMSQRWFTHASPT 204
+ YLL+ +V+E PQH ++RVA G+ +DD +D Y +MS + +SPT
Sbjct: 151 VHSRYLLRHPHTRQVIETPQHFMLRVACGLAEDDSVRALDEVASLYRLMSALSYLPSSPT 210
Query: 205 LFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRG 264
LFN+GT Q+SSC+L+ D +E IYD + A +SK AGGIG++ IRA GS IRG
Sbjct: 211 LFNSGTRHPQMSSCYLLDSPKDELESIYDRYHQVARLSKHAGGIGLAYSRIRARGSLIRG 270
Query: 265 TNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHR 324
TNG SNGIVP L + + V+QGG +RKGA AVYLE WHADI EFL+LR N G+E R
Sbjct: 271 TNGHSNGIVPFLNTLDASVAAVNQGG-RRKGAAAVYLETWHADIEEFLELRDNTGEEARR 329
Query: 325 ARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVV 384
+L A W+PD FM RV ++ WSLF P++ P L D WG F+ Y E +G A++ +
Sbjct: 330 THNLNLAHWIPDEFMRRVDADADWSLFSPSDVPELTDLWGDAFDAAYRAAEAQGLARRTI 389
Query: 385 QAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG--TIKSSNLCTEVIQYTSPTETA 442
A+ L+ ++++ +TG +M FKD N+ +NQ L T+ SSNLCTE+++ T ETA
Sbjct: 390 PARELYGRMMRTLAQTGNGWMTFKDASNRTANQTALPGHTVHSSNLCTEILEVTDDGETA 449
Query: 443 VCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDV 502
VCNL S+ L +V + D+E+L E L++++D+
Sbjct: 450 VCNLGSVNLGAFVDGGAI--------------------DWERLDEAVRTAVVFLDRVVDI 489
Query: 503 NYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTS 562
N+YP E A RSN R RP+G+G GL D F L +PFDS EAQ+L+ I E I A TS
Sbjct: 490 NFYPTEQAERSNSRWRPVGLGAMGLQDVFFQLRLPFDSPEAQRLSTRIAERIMLTAYETS 549
Query: 563 SEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMP 622
++A + GP + + ++G+L PD + + + W LR ++++G+RN+LL+A P
Sbjct: 550 CDLAEKNGPLPNWDRTRTAQGVLHPDHYDTDLAWPERWEALRARVAESGMRNALLLAIAP 609
Query: 623 TASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDD 682
TA+ + I G EC EP SN++ R LSGEF+ VN +L+ DL +G+W + +
Sbjct: 610 TATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVEDLKRLGVWDARTREALREAS 669
Query: 683 GSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSL 742
GSVQ IPEEL+A+Y+T WE+ Q+ L+DMA R ++D SQSLN+ M+ P GKL+S+
Sbjct: 670 GSVQGFAWIPEELRALYRTAWELPQRGLIDMAAARTPFLDQSQSLNLFMETPTIGKLSSM 729
Query: 743 HFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAKMAQMVCSLTNREE 802
+ +AW +GLKT YYLRSR A + ++ DA+ + CSL N E
Sbjct: 730 YAYAWKKGLKT-TYYLRSRPATRIARAAGGSAPATATVPAQAAPDAEA--IACSLENPES 786
Query: 803 CMAC 806
C AC
Sbjct: 787 CEAC 790
>gi|374986758|ref|YP_004962253.1| ribonucleoside-diphosphate reductase subunit alpha [Streptomyces
bingchenggensis BCW-1]
gi|297157410|gb|ADI07122.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
bingchenggensis BCW-1]
Length = 799
Score = 580 bits (1495), Expect = e-162, Method: Compositional matrix adjust.
Identities = 319/803 (39%), Positives = 456/803 (56%), Gaps = 52/803 (6%)
Query: 22 LKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARI 81
L KL+ L DP V+ G + G ++L LA E AA + P+Y+ LAAR+
Sbjct: 30 LTKLTADLPA--TDPGKVAAAALRGRHPGSDAAELRTLATEAAAGLIAEEPEYSKLAARL 87
Query: 82 VVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDS---- 133
+ + + SFS ++ G + LIAD + + +AARLD+
Sbjct: 88 LTLAIAEEAAGQGAVSFSSSVA---------VGHREGLIADGTAEFVTSHAARLDALVDK 138
Query: 134 EIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRVAVGIHKDD----IDSAI 187
+ D + YFG +TL YLL+ + +V+E PQH L+RVA G+ +D +D
Sbjct: 139 ALADGADDRFGYFGLRTLHSRYLLRHPITRQVIETPQHFLLRVACGLAEDHSQRALDDVA 198
Query: 188 KTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGG 247
+ Y + S + +SPTLFN+GT Q+SSC+L+ D ++ IY+ + A +SK AGG
Sbjct: 199 ELYRLTSTLSYLPSSPTLFNSGTRHPQMSSCYLLDSPLDELDSIYNRYHQVARLSKHAGG 258
Query: 248 IGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHAD 307
IG+S IRA GS IRGTNG SNGIVP LR + + V+QGG +RKGA VYLE WHAD
Sbjct: 259 IGLSYSRIRARGSLIRGTNGHSNGIVPFLRTLDASVAAVNQGG-RRKGAACVYLETWHAD 317
Query: 308 IFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEF 367
I EFL+LR N G+E R +L A W+PD FM RV+++ WSLF P +AP L D WG EF
Sbjct: 318 IEEFLELRDNTGEEARRTHNLNIAHWIPDEFMRRVEADADWSLFSPVDAPALVDLWGEEF 377
Query: 368 ERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQ--QNLGTIKS 425
+ YTK E EG A K V A+ L+ ++++ +TG +M FKD N+ +NQ + + S
Sbjct: 378 DAAYTKAEAEGLAVKTVPARQLYARMMRTLAQTGNGWMTFKDAANRTANQTAEPGRVVHS 437
Query: 426 SNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKL 485
SNLCTE+++ T ETAVCNL S+ L ++ E G D+ +L
Sbjct: 438 SNLCTEILEVTDDGETAVCNLGSVNLAAHLGEDG-------------------QMDWARL 478
Query: 486 AEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQ 545
L++++D+N+YP + A SN R RP+G+G+ GL D F L +PFDS EAQQ
Sbjct: 479 DATVRTAVTFLDRVVDINFYPTQEAGASNSRWRPVGLGLMGLQDVFFRLRLPFDSPEAQQ 538
Query: 546 LNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWD--WGGL 603
L+ I E I A S +A R GP+ + + ++G+L PD + + W W L
Sbjct: 539 LSTQISERIMLAAYEASCALAERHGPHPAWSATRTARGVLHPDHY-TDAVATWPERWAAL 597
Query: 604 RDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHD 663
R+ ++K+G+RNSLL+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L++D
Sbjct: 598 RERMAKSGMRNSLLLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVND 657
Query: 664 LTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDH 723
L ++G+W + + +GSVQ +P+E++ +Y+T WE+ Q+ L+DMA R Y+D
Sbjct: 658 LKKLGVWDAQSREALRESNGSVQDFSWVPKEVRELYRTAWEVPQRALIDMAAARTPYLDQ 717
Query: 724 SQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVT 783
SQSLN+ M P GKL+S++ +AW RG+KT YYLRSR A I + + P T
Sbjct: 718 SQSLNLFMASPTIGKLSSMYAYAWKRGIKT-TYYLRSRPATR-IAQSARAAAPATVPIPT 775
Query: 784 DDDDAKMAQMVCSLTNREECMAC 806
+ CSL N E C AC
Sbjct: 776 QQAPVDPEVIACSLENPESCEAC 798
>gi|29829568|ref|NP_824202.1| ribonucleoside-diphosphate reductase alpha chain [Streptomyces
avermitilis MA-4680]
gi|29606676|dbj|BAC70737.1| putative ribonucleoside-diphosphate reductase alpha chain
[Streptomyces avermitilis MA-4680]
Length = 793
Score = 580 bits (1494), Expect = e-162, Method: Compositional matrix adjust.
Identities = 318/803 (39%), Positives = 461/803 (57%), Gaps = 50/803 (6%)
Query: 19 TARLKKLS-YGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASL 77
TA L+ L+ + DP V+ G ++L ELA E AA + + P Y+ L
Sbjct: 25 TALLRTLTDLTADLPDADPGRVAAAALRGRSARADEAELRELATEAAAGLISEDPAYSRL 84
Query: 78 AARIVVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDS 133
AAR++ ++ + SFS +I G + L+AD D + + ARLD+
Sbjct: 85 AARLLTISIAEEAASQGVTSFSASIT---------VGHREGLVADRTADFVRLHTARLDA 135
Query: 134 EIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRVAVGIHKDD----IDSAI 187
I D + YFG +TL YLL+ + +V+E PQH ++RVA G+ +DD +D
Sbjct: 136 LIDTGADDRFGYFGLRTLHSRYLLRHPITRRVIETPQHFMLRVASGLAEDDTSHAVDEVA 195
Query: 188 KTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGG 247
Y +MS+ + +SPTLFN+GT Q+SSC+L+ D ++ IYD + A +SK AGG
Sbjct: 196 ALYGLMSRLDYLPSSPTLFNSGTRHPQMSSCYLLDSPLDELDSIYDRYHQVARLSKHAGG 255
Query: 248 IGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHAD 307
IG+S IR+ GS IRGTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WH+D
Sbjct: 256 IGLSYSRIRSRGSLIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHSD 314
Query: 308 IFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEF 367
I EFL+LR N G++ R +L A W+PD FM RV NG+WSLF P + P L D WG EF
Sbjct: 315 IEEFLELRDNTGEDARRTHNLNLAHWIPDEFMRRVNENGVWSLFSPADVPELVDLWGDEF 374
Query: 368 ERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQ--QNLGTIKS 425
+ Y K E+ G AKK + A++L+ ++++ +TG +M FKD N+ +NQ + + S
Sbjct: 375 DAAYRKAEEAGLAKKTIPARDLYGRMMRTLAQTGNGWMTFKDAANRTANQTAEPGHVVHS 434
Query: 426 SNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKL 485
SNLCTE+++ T ETAVCNL S+ L +V VG R D+E+L
Sbjct: 435 SNLCTEILEVTDDGETAVCNLGSVNLGAFV--------------VG------RDIDWERL 474
Query: 486 AEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQ 545
L++++D+N+YP E A RSN R RP+G+G GL D F L +PFDS EAQ
Sbjct: 475 DATVRTAVTFLDRVVDINFYPTEQAGRSNARWRPVGLGAMGLQDVFFKLRLPFDSPEAQA 534
Query: 546 LNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRD 605
L+ I E I A S+++A R GP + + ++G+L PD + V + W LR+
Sbjct: 535 LSTRIAERIMLAAYEASADLAERNGPLPAWEKTRTARGVLHPDHFDVELTWPERWAALRE 594
Query: 606 MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLT 665
I+ G+RNSLL+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ +L
Sbjct: 595 RIAAVGMRNSLLLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVDELK 654
Query: 666 EMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQ 725
++G+W + + GSVQ +P++++ +Y+T WEI Q+ L+DMA R ++D +Q
Sbjct: 655 QLGVWDAQTREALRESGGSVQGFTWVPQDVRDLYRTAWEIPQRGLIDMAAARTPFLDQAQ 714
Query: 726 SLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKV--T 783
SLN+ ++ P GKL+S++ +AW GLKT YYLRSR A + + ++ V
Sbjct: 715 SLNLFLETPTIGKLSSMYAYAWKSGLKT-TYYLRSRPATRIARAAQAQAQPEKTIPVQQV 773
Query: 784 DDDDAKMAQMVCSLTNREECMAC 806
+ DA + CSL N E C AC
Sbjct: 774 SEPDA----VACSLENPESCEAC 792
>gi|386383362|ref|ZP_10068864.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
tsukubaensis NRRL18488]
gi|385669177|gb|EIF92418.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
tsukubaensis NRRL18488]
Length = 801
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 315/801 (39%), Positives = 455/801 (56%), Gaps = 47/801 (5%)
Query: 19 TARLKKLS-YGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASL 77
TA L+ L+ + DP V+ G + G ++L +LA + AA + ++ P Y+ L
Sbjct: 34 TALLRTLTDLTADLPDTDPGRVAAAALRGRHPGSDAAELHQLATDAAAGLISDDPAYSRL 93
Query: 78 AARIVVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDS 133
AAR++ + SF+ ++ R G LIAD + + A RLD+
Sbjct: 94 AARLLTRTIAAEAAGQGSVSFTASV---------RVGHDEGLIADRTAAFVERYAERLDA 144
Query: 134 EIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRVAVGIHKDD----IDSAI 187
I D + YFG +TL YLL+ + +V+E PQH ++RVA G+ +DD +D +
Sbjct: 145 TIDPAADDRFGYFGLRTLYSRYLLRHPITRQVIETPQHFMLRVACGLAEDDGVRALDEVV 204
Query: 188 KTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGG 247
Y +MS+ + +SPTLFN+GT Q+SSC+L+ D ++ IYD + A +SK AGG
Sbjct: 205 ALYGLMSRLDYLPSSPTLFNSGTRHPQMSSCYLLDSPLDELDSIYDRYHQVARLSKHAGG 264
Query: 248 IGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHAD 307
IG+S IRA GS IRGTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WHAD
Sbjct: 265 IGLSYSRIRARGSLIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHAD 323
Query: 308 IFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEF 367
I EFL+LR N G++ R +L A WVPD FM RV + WSLF P + P L D WG EF
Sbjct: 324 IEEFLELRDNTGEDARRTHNLNLAHWVPDEFMRRVADDAEWSLFSPADTPELVDLWGDEF 383
Query: 368 ERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQ--QNLGTIKS 425
+ Y E +G A+K + A+ L+ ++++ +TG +M FKD N+ +NQ + T+ S
Sbjct: 384 DAAYRAAEAKGLARKTMPARELYGRMMRTLAQTGNGWMTFKDAANRTANQTAEKGHTVHS 443
Query: 426 SNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKL 485
SNLCTE+++ T ETAVCNL S+ L +V VG D+E+L
Sbjct: 444 SNLCTEILEVTDDGETAVCNLGSVNLGAFV--------------VGGE------IDWERL 483
Query: 486 AEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQ 545
L++++D+N+YP E A RSN R RP+G+G GL D F L +PFDS EA+
Sbjct: 484 DATVRTAVTFLDRVVDINFYPTEQAGRSNTRWRPVGLGAMGLQDVFFQLRLPFDSPEARA 543
Query: 546 LNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRD 605
L+ I E I A S+++A R G + + + ++G+L PD +G P+ W LR
Sbjct: 544 LSTRIAERIMLAAYEASADLAERHGTFPAWEKTRAARGVLHPDHYGTEPAWPERWEALRA 603
Query: 606 MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLT 665
I++ G+RNSLL+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ +L
Sbjct: 604 RIARTGMRNSLLLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVAELK 663
Query: 666 EMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQ 725
++G+W + + +GSVQ +P +++ +Y+T WEI Q+ L+DMA R Y+D SQ
Sbjct: 664 KLGVWDAQTREALRDANGSVQGFSWVPADVRELYRTAWEIPQRGLIDMAAARTPYLDQSQ 723
Query: 726 SLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDD 785
SLN+ ++ P GKL+S++ +AW +GLKT YYLRSR A + S P
Sbjct: 724 SLNLFLETPTIGKLSSMYAYAWKQGLKT-TYYLRSRP---ATRIARAASGSAATPVPVPA 779
Query: 786 DDAKMAQMVCSLTNREECMAC 806
+ CSL N E C AC
Sbjct: 780 QATPEEAVACSLENPESCEAC 800
>gi|429196117|ref|ZP_19188103.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
ipomoeae 91-03]
gi|428668195|gb|EKX67232.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
ipomoeae 91-03]
Length = 806
Score = 579 bits (1492), Expect = e-162, Method: Compositional matrix adjust.
Identities = 313/775 (40%), Positives = 449/775 (57%), Gaps = 56/775 (7%)
Query: 53 TSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKK----SFSETIKDMYNHYNER 108
T++L ELA E +A + + P Y+ LAAR++ + +F+E+I
Sbjct: 66 TAELRELATEASAGLISEDPAYSKLAARLLAIGIRAEAASQGVTTFTESIA--------- 116
Query: 109 SGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVER 166
G + L+AD + + +A RLD+ + D + YFG +TL YLL+ + KV+E
Sbjct: 117 VGHREGLVADRTAEFVRVHAERLDALVDPAADDRFGYFGLRTLHSRYLLRHPITRKVIET 176
Query: 167 PQHMLMRVAVGIHKD----------DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLS 216
PQH ++RVA G+ +D +D Y +MS+ + +SPTLFN+GT Q+S
Sbjct: 177 PQHFMLRVASGLAEDTALDARTGTRSVDEVAALYGLMSRLDYLPSSPTLFNSGTRHPQMS 236
Query: 217 SCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPML 276
SC+L+ D ++ IYD + A +SK AGGIG+S IR+ GS IRGTNG SNGIVP L
Sbjct: 237 SCYLLDSPLDELDSIYDRYHQVARLSKHAGGIGLSYSRIRSRGSLIRGTNGHSNGIVPFL 296
Query: 277 RVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPD 336
+ + + V+QGG +RKGA AVYLE WH+DI EFL+LR N G++ R +L A W+PD
Sbjct: 297 KTLDASVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTGEDARRTHNLNLAHWIPD 355
Query: 337 LFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKS 396
FM RV ++ WSLF P + P L D WG EF+ Y K E +G AKK + A++L+ ++++
Sbjct: 356 EFMRRVNADERWSLFSPADVPELVDLWGEEFDAAYRKAEADGLAKKTIPARDLYGRMMRT 415
Query: 397 QIETGTPYMLFKDTCNKKSNQQNLG--TIKSSNLCTEVIQYTSPTETAVCNLASIALPRY 454
+TG +M FKD N+ +NQ + SSNLCTE+++ T ETAVCNL S+ L +
Sbjct: 416 LAQTGNGWMTFKDAANRTANQTAEAGRVVHSSNLCTEILEVTDDGETAVCNLGSVNLGAF 475
Query: 455 VREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSN 514
V + G D+E+L E L++++D+N+YP E A RSN
Sbjct: 476 V-----------DQATGD-------LDWERLDETVRTAVTFLDRVVDINFYPTEQAGRSN 517
Query: 515 LRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYET 574
R RP+G+G GL D F L +PFDS EA+ L+ I E I A TS+++A R+GP
Sbjct: 518 ARWRPVGLGAMGLQDVFFKLRLPFDSPEAKALSTRIAERIMLAAYETSTDLAERDGPLPA 577
Query: 575 YHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNE 634
+ + ++G+L PD +GV + W LR+ I+ G+RNSLL+A PTA+ + I G E
Sbjct: 578 WEKTRTARGVLHPDHYGVEFTWPERWAALRERIATTGMRNSLLLAIAPTATIASIAGVYE 637
Query: 635 CFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEE 694
C EP SN++ R LSGEF+ VN +L+ DL +G+W + + +GSVQ IP +
Sbjct: 638 CIEPQVSNLFKRETLSGEFLQVNSYLVQDLKALGVWDARTREALRDSNGSVQDFAWIPAD 697
Query: 695 LKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTG 754
++A+Y+T WEI Q+ L+DMA R Y+D SQSLN+ ++ P GKL+S++ +AW GLKT
Sbjct: 698 VRALYRTAWEIPQRGLIDMAAARTPYLDQSQSLNLFLETPTIGKLSSMYAYAWKSGLKT- 756
Query: 755 MYYLRSRAAADAIKFTVDTSVLKENP---KVTDDDDAKMAQMVCSLTNREECMAC 806
YYLRSR A I +S P + T DD + CSL N E C AC
Sbjct: 757 TYYLRSRPATR-IARAAGSSSAAATPVPVQATADD-----AVACSLENPESCEAC 805
>gi|295836583|ref|ZP_06823516.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
sp. SPB74]
gi|197697283|gb|EDY44216.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
sp. SPB74]
Length = 790
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 318/805 (39%), Positives = 458/805 (56%), Gaps = 53/805 (6%)
Query: 19 TARLKKLS-YGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASL 77
TA L+ L+ + DP V+ G ++L ELA E AA + + P Y+ L
Sbjct: 21 TALLRTLTELTADLPDTDPGRVAAAALRGRSAHADEAELRELATEAAAGLISEDPAYSRL 80
Query: 78 AARI----VVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDS 133
AAR+ +V+ F+ ++ G + LI D + + +AARLD+
Sbjct: 81 AARLLAIGIVAEAAGQGASGFAASVA---------VGHREGLIGDRTAEFVATHAARLDA 131
Query: 134 EIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRVAVGIHKDD----IDSAI 187
I + D + YFG +TL YLL+ + +V+E PQH L+RVA G+ DD +D
Sbjct: 132 LIDPEGDDRFGYFGLRTLYSRYLLRHPITRQVIETPQHFLLRVAAGLAADDSLPAVDEVA 191
Query: 188 KTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGG 247
Y +MS+ + +SPTLFN+GT Q+SSC+L+ D ++ IY+ + A +SK AGG
Sbjct: 192 SLYRLMSRLDYLPSSPTLFNSGTRHPQMSSCYLLDSPKDELDSIYERYLQVARLSKHAGG 251
Query: 248 IGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHAD 307
IG++ IR+ GS IRGTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WH+D
Sbjct: 252 IGIAYSRIRSRGSLIRGTNGHSNGIVPFLKTLDSSVAAVNQGG-RRKGAAAVYLETWHSD 310
Query: 308 IFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEF 367
I EFL+LR N G+++ R L A W+PD FM RV ++G WSLF P + P L D WG EF
Sbjct: 311 IEEFLELRDNTGEDQRRTHHLNLAHWIPDEFMRRVAADGEWSLFSPADVPELTDLWGEEF 370
Query: 368 ERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQ--QNLGTIKS 425
E Y E +G A+K + A+ L+ ++++ +TG +M FKD N+ +NQ + + S
Sbjct: 371 EAAYRAAEAKGLARKTMPARELYGRMMRTLAQTGQGWMTFKDHSNRTANQTAEPGSVVHS 430
Query: 426 SNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKL 485
SNLCTE+I+ T ETAVCNL SI L +V +N D+E+L
Sbjct: 431 SNLCTEIIEVTDDGETAVCNLGSINLGAFV--------------------ENGEIDWERL 470
Query: 486 AEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQ 545
E L++++D+N+YP A SN R RP+G+G GL D F L +PFDS A+
Sbjct: 471 DETVRTAVTFLDRVVDINFYPTGQAANSNARWRPVGLGAMGLQDVFFKLRLPFDSAAAKA 530
Query: 546 LNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRD 605
++ I E I A S+++A + GP + + ++G+L PD + V + W LR
Sbjct: 531 VSTRIAERIMLAAYEASADLAEKHGPVPAWEKTRTARGVLHPDHFDVERTWPERWEALRA 590
Query: 606 MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLT 665
I+K G+RNSLL+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ DL
Sbjct: 591 RIAKTGMRNSLLLAIAPTATIASIAGVYECVEPQVSNLFKRETLSGEFLQVNGYLVEDLK 650
Query: 666 EMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQ 725
++G+W + + +GSVQ IPE+++A+Y+T WE+ Q+ L+DMA +R ++D SQ
Sbjct: 651 KLGVWDARTREALREANGSVQGFNWIPEDVRALYRTAWELPQRGLIDMAAERTAFLDQSQ 710
Query: 726 SLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP----K 781
SLN+ M+ P GKL+S++ HAW +GLKT YYLRSR A I +S P +
Sbjct: 711 SLNLFMETPTIGKLSSMYAHAWNKGLKT-TYYLRSRPATR-IARAAGSSAAASAPIPVQQ 768
Query: 782 VTDDDDAKMAQMVCSLTNREECMAC 806
D DA + CSL N E C AC
Sbjct: 769 AVPDADA----IACSLENPESCEAC 789
>gi|421744324|ref|ZP_16182312.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
sp. SM8]
gi|406687276|gb|EKC91309.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
sp. SM8]
Length = 791
Score = 578 bits (1491), Expect = e-162, Method: Compositional matrix adjust.
Identities = 308/784 (39%), Positives = 447/784 (57%), Gaps = 45/784 (5%)
Query: 35 DPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTK--- 91
DP V+ G ++L LA E AA + + P Y+ LAAR++ + +
Sbjct: 40 DPGRVAAAALRGRNAASDEAELRSLATEAAAGLISEDPAYSRLAARLLTRTIAEEAAGQG 99
Query: 92 -KSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKT 150
+F+E++ +G + LIAD + +A RLD+ + D + YFG +T
Sbjct: 100 VTTFTESVA---------TGHREGLIADRTAAFVTAHAERLDALVDPAADDRFGYFGLRT 150
Query: 151 LERSYLLKV--QGKVVERPQHMLMRVAVGIHKDD----IDSAIKTYHMMSQRWFTHASPT 204
+ YLL+ +V+E PQH ++RVA G+ +DD +D Y +MS + +SPT
Sbjct: 151 VHSRYLLRHPHTRQVIETPQHFMLRVACGLAEDDSARALDEVASLYRLMSALSYLPSSPT 210
Query: 205 LFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRG 264
LFN+GT Q+SSC+L+ D +E IYD + A +SK AGGIG++ IRA GS IRG
Sbjct: 211 LFNSGTRHPQMSSCYLLDSPKDELESIYDRYHQVARLSKHAGGIGLAYSRIRARGSLIRG 270
Query: 265 TNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHR 324
TNG SNGIVP L + + V+QGG +RKGA AVYLE WHAD+ EFL+LR N G+E R
Sbjct: 271 TNGHSNGIVPFLNTLDASVAAVNQGG-RRKGAAAVYLETWHADVEEFLELRDNTGEEARR 329
Query: 325 ARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVV 384
+L A W+PD FM RV ++ WSLF P++ P L D WG F+ Y E G A++ +
Sbjct: 330 THNLNLAHWIPDEFMRRVDADADWSLFSPSDVPELTDLWGDAFDAAYRAAEARGLARRTI 389
Query: 385 QAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG--TIKSSNLCTEVIQYTSPTETA 442
A+ L+ ++++ +TG +M FKD N+ +NQ L T+ SSNLCTE+++ T ETA
Sbjct: 390 PARELYGRMMRTLAQTGNGWMTFKDASNRTANQTALPGHTVHSSNLCTEILEVTDDGETA 449
Query: 443 VCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDV 502
VCNL S+ L +V + D+E+L E L++++D+
Sbjct: 450 VCNLGSVNLGAFVDGGAI--------------------DWERLDEAVRTAVVFLDRVVDI 489
Query: 503 NYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTS 562
N+YP E A RSN R RP+G+G GL D F L +PFDS EAQ+L+ I E I A TS
Sbjct: 490 NFYPTEQAERSNSRWRPVGLGAMGLQDVFFQLRLPFDSPEAQRLSTRIAERIMLTAYETS 549
Query: 563 SEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMP 622
++A + GP + + ++G+L PD + + + W LR ++++G+RN+LL+A P
Sbjct: 550 CDLAEKNGPLPNWDRTRTAQGVLHPDHYDTDLAWPERWEALRARVAESGMRNALLLAIAP 609
Query: 623 TASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDD 682
TA+ + I G EC EP SN++ R LSGEF+ VN +L+ DL +G+W + +
Sbjct: 610 TATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVEDLKRLGVWDARTREALREAS 669
Query: 683 GSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSL 742
GSVQ IPEEL+A+Y+T WE+ Q+ L+DMA R ++D SQSLN+ M+ P GKL+S+
Sbjct: 670 GSVQGFAWIPEELRALYRTAWELPQRGLIDMAAARTPFLDQSQSLNLFMETPTIGKLSSM 729
Query: 743 HFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAKMAQMVCSLTNREE 802
+ +AW +GLKT YYLRSR A + ++ DA+ + CSL N E
Sbjct: 730 YAYAWKKGLKT-TYYLRSRPATRIARAAGGSAPATATVPAQAAPDAEA--IACSLENPES 786
Query: 803 CMAC 806
C AC
Sbjct: 787 CEAC 790
>gi|291454053|ref|ZP_06593443.1| ribonucleotide-diphosphate reductase subunit large [Streptomyces
albus J1074]
gi|291357002|gb|EFE83904.1| ribonucleotide-diphosphate reductase subunit large [Streptomyces
albus J1074]
Length = 791
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 308/784 (39%), Positives = 447/784 (57%), Gaps = 45/784 (5%)
Query: 35 DPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTK--- 91
DP V+ G ++L LA E AA + + P Y+ LAAR++ + +
Sbjct: 40 DPGRVAAAALRGRNAASDEAELRSLATEAAAGLISEDPAYSRLAARLLTRTIAEEAAGQG 99
Query: 92 -KSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKT 150
+F+E++ +G + LIAD + +A RLD+ + D + YFG +T
Sbjct: 100 VTTFTESVA---------TGHREGLIADRTAAFVTAHAERLDALVDPAADDRFGYFGLRT 150
Query: 151 LERSYLLKV--QGKVVERPQHMLMRVAVGIHKDD----IDSAIKTYHMMSQRWFTHASPT 204
+ YLL+ +V+E PQH ++RVA G+ +DD +D Y +MS + +SPT
Sbjct: 151 VHSRYLLRHPHTRQVIETPQHFMLRVACGLAEDDSARALDEVASLYRLMSALSYLPSSPT 210
Query: 205 LFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRG 264
LFN+GT Q+SSC+L+ D +E IYD + A +SK AGGIG++ IRA GS IRG
Sbjct: 211 LFNSGTRHPQMSSCYLLDSPKDELESIYDRYHQVARLSKHAGGIGLAYSRIRARGSLIRG 270
Query: 265 TNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHR 324
TNG SNGIVP L + + V+QGG +RKGA AVYLE WHAD+ EFL+LR N G+E R
Sbjct: 271 TNGHSNGIVPFLNTLDASVAAVNQGG-RRKGAAAVYLETWHADVEEFLELRDNTGEEARR 329
Query: 325 ARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVV 384
+L A W+PD FM RV ++ WSLF P++ P L D WG F+ Y E G A++ +
Sbjct: 330 THNLNLAHWIPDEFMRRVDADADWSLFSPSDVPELTDLWGDAFDAAYRAAEARGLARRTI 389
Query: 385 QAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG--TIKSSNLCTEVIQYTSPTETA 442
A+ L+ ++++ +TG +M FKD N+ +NQ L T+ SSNLCTE+++ T ETA
Sbjct: 390 PARELYGRMMRTLAQTGNGWMTFKDASNRTANQTALPGHTVHSSNLCTEILEVTDDGETA 449
Query: 443 VCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDV 502
VCNL S+ L +V + D+E+L E L++++D+
Sbjct: 450 VCNLGSVNLGAFVDGGAI--------------------DWERLDEAVRTAVVFLDRVVDI 489
Query: 503 NYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTS 562
N+YP E A RSN R RP+G+G GL D F L +PFDS EAQ+L+ I E I A TS
Sbjct: 490 NFYPTEQAERSNSRWRPVGLGAMGLQDVFFQLRLPFDSPEAQRLSTRIAERIMLTAYETS 549
Query: 563 SEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMP 622
++A + GP + + ++G+L PD + + + W LR ++++G+RN+LL+A P
Sbjct: 550 CDLAEKNGPLPNWDRTRTAQGVLHPDHYDTDLAWPERWEALRARVAESGMRNALLLAIAP 609
Query: 623 TASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDD 682
TA+ + I G EC EP SN++ R LSGEF+ VN +L+ DL +G+W + +
Sbjct: 610 TATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVEDLKRLGVWDARTREALREAS 669
Query: 683 GSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSL 742
GSVQ IPEEL+A+Y+T WE+ Q+ L+DMA R ++D SQSLN+ M+ P GKL+S+
Sbjct: 670 GSVQGFAWIPEELRALYRTAWELPQRGLIDMAAARTPFLDQSQSLNLFMETPTIGKLSSM 729
Query: 743 HFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAKMAQMVCSLTNREE 802
+ +AW +GLKT YYLRSR A + ++ DA+ + CSL N E
Sbjct: 730 YAYAWKKGLKT-TYYLRSRPATRIARAAGGSAPATATVPAQAAPDAEA--IACSLENPES 786
Query: 803 CMAC 806
C AC
Sbjct: 787 CEAC 790
>gi|111184258|gb|ABH08178.1| HSPV074b [Horsepox virus]
Length = 440
Score = 578 bits (1490), Expect = e-162, Method: Compositional matrix adjust.
Identities = 284/451 (62%), Positives = 333/451 (73%), Gaps = 23/451 (5%)
Query: 219 FLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRV 278
FL+ M DDSIEGIYDTLK CA+ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV
Sbjct: 13 FLLNMMDDSIEGIYDTLKRCALISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRV 72
Query: 279 FNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLF 338
+N+TARY+DQGG KR G A+YLEPWH+DI FLD +KN G E+HR RDLF ALW+PDLF
Sbjct: 73 YNNTARYMDQGGNKRPGVMAIYLEPWHSDIMAFLDFKKNTGNEKHRTRDLFIALWIPDLF 132
Query: 339 MERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQI 398
M+RV+ +G WSL C +E GL + WG EFERLYT K + + ++A+ +W I++SQI
Sbjct: 133 MKRVKDDGEWSLMCLDECSGLNNVWGDEFERLYT-IRKRKEIQDYMKARVVWKAIIESQI 191
Query: 399 ETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREM 458
ETGTP++L+KD CNKKSNQQNLGTIK SNLCTE+IQY E AVCNLAS+AL +V +
Sbjct: 192 ETGTPFILYKDACNKKSNQQNLGTIKCSNLCTEIIQYADANEVAVCNLASVALNMFVID- 250
Query: 459 GVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHR 518
FDF KL +V ++ NLNKIID+NYYP+ A SN RHR
Sbjct: 251 -------------------GQFDFFKLKDVVKVIVRNLNKIIDINYYPIPKAEISNKRHR 291
Query: 519 PIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGS 578
PIGIGVQGLAD FILL PFDS EAQ LNK IFET Y AL S E+A +EGPYE+Y S
Sbjct: 292 PIGIGVQGLADAFILLNYPFDSLEAQDLNKKIFET--YGALDASCELAEKEGPYESYVRS 349
Query: 579 PVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
S GILQ D+W V PSD W+W L+D I G+RNSLLVAPMPTAST+QIL NNE +P
Sbjct: 350 YASNGILQYDLWNVVPSDLWNWKPLKDKIKTYGLRNSLLVAPMPTASTAQILENNESVKP 409
Query: 639 YTSNIYSRRVLSGEFVVVNKHLLHDLTEMGL 669
YTSNIY+RRVLSGEF VVN HLL LTE L
Sbjct: 410 YTSNIYTRRVLSGEFQVVNPHLLRVLTEKKL 440
>gi|408529355|emb|CCK27529.1| ribonucleoside-diphosphate reductase alpha chain [Streptomyces
davawensis JCM 4913]
Length = 781
Score = 577 bits (1487), Expect = e-162, Method: Compositional matrix adjust.
Identities = 313/801 (39%), Positives = 454/801 (56%), Gaps = 54/801 (6%)
Query: 19 TARLKKLS-YGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASL 77
TA L+ L+ + DP V+ G ++L ELA E AA + + P Y+ L
Sbjct: 21 TALLRTLTELTADLPDADPGRVAAAALRGRSSRADEAELRELATEAAAGLISEDPAYSRL 80
Query: 78 AARIVVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDS 133
AAR++ ++ SF+E++ G + LIAD + + +A RLD+
Sbjct: 81 AARLLTISIAAEAASQGVVSFTESVA---------VGHREGLIADRTAEFVRIHAERLDA 131
Query: 134 EIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRVAVGIHKDDIDSAIKT-- 189
+ D + YFG +TL YLL+ + KVVE PQH ++RVA G+ +DD A+
Sbjct: 132 LVDSGADDRFGYFGLRTLHSRYLLRHPITRKVVETPQHFMLRVAAGLAEDDTTRALNEVA 191
Query: 190 --YHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGG 247
Y +MS+ + +SPTLFN+GT Q+SSC+L+ D ++ IYD + A +SK AGG
Sbjct: 192 ALYGLMSRLDYLPSSPTLFNSGTRHPQMSSCYLLDSPMDELDSIYDRYHQVARLSKHAGG 251
Query: 248 IGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHAD 307
IG+S IR+ GS IRGTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WH+D
Sbjct: 252 IGLSYSRIRSRGSLIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHSD 310
Query: 308 IFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEF 367
I EFL+LR N G++ R +L A W+PD FM RV + WSLF P + P L D WG EF
Sbjct: 311 IEEFLELRDNTGEDARRTHNLNLAHWIPDEFMRRVNEDAQWSLFSPADVPELVDLWGEEF 370
Query: 368 ERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG--TIKS 425
+ Y + E G A+K + A++L+ ++++ +TG +M FKD N+ +NQ L + S
Sbjct: 371 DAAYRRAEDAGLARKTIAARDLYGRMMRTLAQTGNGWMTFKDAANRTANQTALPGHVVHS 430
Query: 426 SNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKL 485
SNLCTE+++ T ETAVCNL S+ L +V N D+E+L
Sbjct: 431 SNLCTEILEVTDDGETAVCNLGSVNLGAFV--------------------ANGDIDWERL 470
Query: 486 AEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQ 545
L++++D+N+YP E A RSN + RP+G+G GL D F L +PFDS EA+
Sbjct: 471 DATVRTAVTFLDRVVDINFYPTEQAGRSNAKWRPVGLGAMGLQDVFFQLRLPFDSPEAKA 530
Query: 546 LNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRD 605
L+ I E I A S+++A R GP + + ++G+L PD + + W LR
Sbjct: 531 LSTRIAERIMLAAYEASADLAERNGPLPAWEKTRTAQGVLHPDHYDAELTWPERWAALRS 590
Query: 606 MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLT 665
I+ G+RNSLL+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L++DL
Sbjct: 591 RIAGTGMRNSLLLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVNDLK 650
Query: 666 EMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQ 725
E+G+W + + +GSVQ IPE+++ +Y+T WEI Q+ L+DMA R ++D SQ
Sbjct: 651 ELGVWDARTREALREANGSVQDFVWIPEDVRRLYRTAWEIPQRGLIDMAAARTPFLDQSQ 710
Query: 726 SLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDD 785
SLN+ ++ P GKL+S++ +AW GLKT YYLRSR A + T ++++
Sbjct: 711 SLNLFLETPTIGKLSSMYAYAWKSGLKT-TYYLRSRPATRIARAAQATLPVQQSADA--- 766
Query: 786 DDAKMAQMVCSLTNREECMAC 806
+ CSL N E C AC
Sbjct: 767 -------VACSLENPESCEAC 780
>gi|302554046|ref|ZP_07306388.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
viridochromogenes DSM 40736]
gi|302471664|gb|EFL34757.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
viridochromogenes DSM 40736]
Length = 793
Score = 577 bits (1487), Expect = e-162, Method: Compositional matrix adjust.
Identities = 316/787 (40%), Positives = 454/787 (57%), Gaps = 55/787 (6%)
Query: 35 DPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKK-- 92
DP V+ G ++L +LA E AA + + P Y+ LAAR++ +
Sbjct: 46 DPGRVAAAALRGRSARADEAELRDLATEAAAGLISEDPAYSRLAARLLTIGIRAEAASQG 105
Query: 93 --SFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKT 150
SF+E++ + H R GL IAD + + +AARLD+ I D + YFG +T
Sbjct: 106 VTSFTESV--VVGH---REGL----IADRTAEFVRLHAARLDALIDPAADDRFGYFGLRT 156
Query: 151 LERSYLLK--VQGKVVERPQHMLMRVAVGIHKD----DIDSAIKTYHMMSQRWFTHASPT 204
L YLL+ + KVVE PQH ++RVA G+ +D +D Y +MS+ + +SPT
Sbjct: 157 LHSRYLLRHPLTRKVVETPQHFMLRVAAGLAEDHTARSVDEVAALYELMSRLDYLPSSPT 216
Query: 205 LFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRG 264
LFN+GT Q+SSC+L+ D ++ IYD + A +SK AGGIG++ IRA GS IRG
Sbjct: 217 LFNSGTRHPQMSSCYLLDSPKDELDSIYDRYHQVARLSKHAGGIGLAYSRIRARGSLIRG 276
Query: 265 TNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHR 324
TNG SNGIVP L+ + + V+QGG +RKGA AVYLE WH+D+ EFL+LR N G++ R
Sbjct: 277 TNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHSDVEEFLELRDNTGEDARR 335
Query: 325 ARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVV 384
+L A WVPD FM RV ++ WSLF P++ P L D WG EF+ Y E +G AK+ +
Sbjct: 336 THNLNLAHWVPDEFMRRVNADAQWSLFSPSDVPELVDLWGEEFDTAYRAAEAKGLAKRTL 395
Query: 385 QAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQ--QNLGTIKSSNLCTEVIQYTSPTETA 442
A+ L+ ++++ +TG +M FKD N+ +NQ + + SSNLCTE+++ TS ETA
Sbjct: 396 PARELYGRMMRTLAQTGNGWMTFKDAANRTANQTAEPGHVVHSSNLCTEILEVTSDGETA 455
Query: 443 VCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDV 502
VCNL S+ L +V + D+++L L++++D+
Sbjct: 456 VCNLGSVNLGAFV------------------DTSTGDLDWDRLDATVRTAVTFLDRVVDI 497
Query: 503 NYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTS 562
N+YP E A RSN R RP+G+G GL D F L +PFDS EA+ L+ I E I A S
Sbjct: 498 NFYPTEQAGRSNSRWRPVGLGAMGLQDVFFKLRLPFDSPEAKALSTRIAERIMLAAYEAS 557
Query: 563 SEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMP 622
+++A R GP + + ++G+L PD + V + W LR+ I+ G+RNSLL+A P
Sbjct: 558 ADLAERSGPLPAWEKTRTARGVLHPDHYDVELTWPERWAALRERIAATGMRNSLLLAIAP 617
Query: 623 TASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDD 682
TA+ + I G EC EP SN++ R LSGEF+ VN +L+ +L +G+W + +
Sbjct: 618 TATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVDELKRLGVWDARSREALREAS 677
Query: 683 GSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSL 742
GSVQ IPE+++A+Y+T WEI Q+ L+DMA R ++D SQSLN+ ++ P GKL+S+
Sbjct: 678 GSVQDFAWIPEDVRALYRTAWEIPQRGLIDMAAARTPFLDQSQSLNLFLETPTIGKLSSM 737
Query: 743 HFHAWLRGLKTGMYYLRSRAA---ADAIKFTVDTSVLKENPKVTDDDDAKMAQMVCSLTN 799
+ +AW GLKT YYLRSR A A A + TV + T D +A + CSL N
Sbjct: 738 YAYAWKSGLKT-TYYLRSRPATRIARAAQATVPA-------QATPDPEA----VACSLEN 785
Query: 800 REECMAC 806
E C AC
Sbjct: 786 PESCEAC 792
>gi|329939693|ref|ZP_08288994.1| ribonucleotide-diphosphate reductase large chain [Streptomyces
griseoaurantiacus M045]
gi|329301263|gb|EGG45158.1| ribonucleotide-diphosphate reductase large chain [Streptomyces
griseoaurantiacus M045]
Length = 811
Score = 577 bits (1486), Expect = e-161, Method: Compositional matrix adjust.
Identities = 314/791 (39%), Positives = 456/791 (57%), Gaps = 37/791 (4%)
Query: 34 CDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKK- 92
DP V+ G + +L ELA E AA + + P ++ LAAR++ +
Sbjct: 39 ADPGRVAAAALRGRSRHAGEEELRELATEAAAGLISEDPAHSRLAARLLTLTIRAEAASQ 98
Query: 93 ---SFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFK 149
SF+ ++ +G + L+AD + ++AARLD+ + D D + YFG +
Sbjct: 99 GVTSFTSSVA---------TGHREGLVADRTAAFVRRHAARLDALVDPDADDRFGYFGLR 149
Query: 150 TLERSYLLK--VQGKVVERPQHMLMRVAVGIHKDD----------IDSAIKTYHMMSQRW 197
TL YLL+ V KV+E PQH L+RVA G+ ++ ++ + +MS+
Sbjct: 150 TLHTRYLLRHPVTRKVIETPQHFLLRVASGLAEEADRAGAGADRAVEEVAALHGLMSRLE 209
Query: 198 FTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRA 257
+ +SPTLFN+GT Q+SSCFL+ +D ++ IY + A +SK AGGIG++ IR+
Sbjct: 210 YLPSSPTLFNSGTRHPQMSSCFLLDSPEDELDSIYSRYHQVARLSKHAGGIGLAYSRIRS 269
Query: 258 TGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKN 317
G+ IRGTNG S GIVP L+ + + V+QGG +RKGA AVYLE WHADI EFL+LR N
Sbjct: 270 RGALIRGTNGHSGGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHADIEEFLELRDN 328
Query: 318 HGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKE 377
G++ R +L A W+PD FM RV+++ WSLF P++ PGL D WG EF+ Y E E
Sbjct: 329 TGEDARRTHNLNLAHWIPDEFMRRVEADAQWSLFSPSDVPGLTDLWGAEFDAAYRAAEAE 388
Query: 378 GKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQ--QNLGTIKSSNLCTEVIQY 435
G A + + A+ L+ ++++ TGT +M FKDT N+ +NQ + I SSNLCTE+++
Sbjct: 389 GLAVRTLPARELYGRMMRTLASTGTGWMTFKDTANRTANQTAEPGNVIHSSNLCTEILEV 448
Query: 436 TSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTEN 495
T ETAVCNL SI L +VRE + G+ + D+E+L
Sbjct: 449 TEDGETAVCNLGSINLGAFVRE-----GNTADAGTADAGAADGGIDWERLDATVRTAVTF 503
Query: 496 LNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIY 555
L+++ID+N+YP E A RSN R RP+G+GV GL D L +PFDS EA+ L+ I E +
Sbjct: 504 LDRVIDLNFYPTEEAGRSNARWRPVGLGVMGLQDVLFRLRLPFDSPEARALSARIAERLM 563
Query: 556 YHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNS 615
A TS+E+AAR GP + + ++G+L PD + V S W LR I+ G+RN+
Sbjct: 564 LTAYETSAELAARNGPLPAWERTRTARGVLHPDHYDVELSWPERWAALRRRIAVTGMRNA 623
Query: 616 LLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIK 675
LL+A PTA+ + I G +EC EP SN++ R LSGEF+ VN +L+ DL +G W +
Sbjct: 624 LLLAIAPTATIASIAGVHECVEPQVSNLFKRETLSGEFLQVNPYLVADLKRLGRWDADTR 683
Query: 676 NKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPN 735
+ +GSV+ + +PEE++ +Y+T WE+ Q+ L+DMA R ++D +QSLN+ ++ P
Sbjct: 684 EALREANGSVEGLTWLPEEVRRLYRTAWELPQRALIDMAAARTPFLDQAQSLNLFLETPT 743
Query: 736 FGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAKMAQMVC 795
GKL+S++ +AW GLKT YYLRSR A + E P T D +A C
Sbjct: 744 IGKLSSMYAYAWKSGLKT-TYYLRSRPATRIARAARAQRPAAEAPAPTVPDPEAVA---C 799
Query: 796 SLTNREECMAC 806
SL N E C AC
Sbjct: 800 SLENPEYCEAC 810
>gi|456388969|gb|EMF54409.1| nrdL protein [Streptomyces bottropensis ATCC 25435]
Length = 774
Score = 577 bits (1486), Expect = e-161, Method: Compositional matrix adjust.
Identities = 306/764 (40%), Positives = 438/764 (57%), Gaps = 42/764 (5%)
Query: 55 QLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKK----SFSETIKDMYNHYNERSG 110
+L ELA E AA + + P Y+ LAAR++ + +F+E+I G
Sbjct: 40 ELRELATEAAAGLISEDPAYSKLAARLLAIGIRDEAASQGVTTFTESIA---------VG 90
Query: 111 LKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQ 168
+ L+AD + +A RLD+ + D + YFG +TL YLL+ + KVVE PQ
Sbjct: 91 HREGLVADRTAEFARVHAERLDALVDPAGDDRFGYFGLRTLHSRYLLRHPLTRKVVETPQ 150
Query: 169 HMLMRVAVGIHKDD----IDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMK 224
H ++RVA G+ +DD +D Y +MS+ + +SPTLFN+GT Q+SSC+L+
Sbjct: 151 HFMLRVASGLAEDDTTRAVDEVAALYRLMSRLDYLPSSPTLFNSGTRHPQMSSCYLLDSP 210
Query: 225 DDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTAR 284
D ++ IYD + A +SK AGGIG+S IR+ GS IRGTNG SNGIVP L+ + +
Sbjct: 211 LDELDSIYDRYHQVARLSKHAGGIGLSYSRIRSRGSLIRGTNGHSNGIVPFLKTLDASVA 270
Query: 285 YVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQS 344
V+QGG +RKGA AVYLE WH+DI EFL+LR N G++ R +L A W+PD FM RV +
Sbjct: 271 AVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTGEDARRTHNLNLAHWIPDEFMRRVNA 329
Query: 345 NGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPY 404
+ WSLF P + P L D WG EFE Y K E G A+K + A++L+ ++++ +TG +
Sbjct: 330 DEQWSLFSPADVPELVDLWGEEFEAAYRKAEANGLARKTIAARDLYGRMMRTLAQTGNGW 389
Query: 405 MLFKDTCNKKSNQ--QNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPM 462
M FKD N+ +NQ + + SSNLCTE+++ T ETAVCNL S+ L +V M
Sbjct: 390 MTFKDAANRTANQTAEPGHVVHSSNLCTEILEVTDDGETAVCNLGSVNLGAFVDRAAGDM 449
Query: 463 ESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGI 522
D+++L E L++++D+N+YP E A RSN R RP+G+
Sbjct: 450 ------------------DWQRLDETVRTAVTFLDRVVDINFYPTEQAGRSNARWRPVGL 491
Query: 523 GVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSK 582
G GL D F L +PFDS EA+ L+ I E I A S+++A R GP + + ++
Sbjct: 492 GAMGLQDVFFQLRLPFDSPEAKALSTRIAERIMLAAYEASADLAERNGPLPAWEKTRTAR 551
Query: 583 GILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSN 642
G+L PD + P+ W LR+ ++ G+RNSLL+A PTA+ + I G EC EP SN
Sbjct: 552 GVLHPDHFDARPAWPERWAALREHVATTGMRNSLLLAIAPTATIASIAGVYECIEPQVSN 611
Query: 643 IYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTV 702
++ R LSGEF+ VN +L+ DL E+G+W + + GSV+ IP +++A+Y+T
Sbjct: 612 LFKRETLSGEFLQVNSYLVKDLKELGVWDARTREALRESGGSVEDFAWIPADVRALYRTA 671
Query: 703 WEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRA 762
WEI Q+ L+DMA R Y+D SQSLN+ ++ P GKL+S++ +AW GLKT YYLRSR
Sbjct: 672 WEIPQRGLIDMAAARTPYLDQSQSLNLFLETPTIGKLSSMYAYAWKSGLKT-TYYLRSRP 730
Query: 763 AADAIKFTVDTSVLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
A I + + + CSL N E C AC
Sbjct: 731 ATR-IARAAQGQARQPETNIPLQQATSAEAVACSLENPESCEAC 773
>gi|386845601|ref|YP_006263614.1| ribonucleoside-diphosphate reductase subunit alpha [Actinoplanes
sp. SE50/110]
gi|359833105|gb|AEV81546.1| ribonucleoside-diphosphate reductase alpha chain [Actinoplanes sp.
SE50/110]
Length = 822
Score = 576 bits (1484), Expect = e-161, Method: Compositional matrix adjust.
Identities = 306/771 (39%), Positives = 456/771 (59%), Gaps = 44/771 (5%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M V KR+G+ E V +KI +++ GL + DP+ V+ K +G+Y G TT +LD+L+
Sbjct: 18 MRVRKRNGEFEPVDVNKIVTAVERWITGL--DEVDPLRVATKTISGLYDGATTEELDKLS 75
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLI 116
+TAA + P Y+ LAAR+++ + + ++ +FSE+I+ G LI
Sbjct: 76 IQTAAELIGEEPQYSRLAARLLIDLVEQEVREQGATTFSESIE---------LGFAQGLI 126
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRV 174
DD + ++ + A LD+ + D ++YFG +T+ YLL+ ++ VE PQ+ LMRV
Sbjct: 127 GDDAHAFVVAHRAELDAAVDVANDLRFEYFGLRTVADRYLLRHPIKRVPVETPQYFLMRV 186
Query: 175 AVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
A G+ + AI Y +M+ + +SPTLFN+GT Q+SSCFLV D ++ IY+
Sbjct: 187 ACGLSQT-AQEAIGFYRLMASLAYLPSSPTLFNSGTRHTQMSSCFLVDSPKDELDSIYER 245
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+ A +SK +GGIG++ +R G+ IRGTNG SNGIVP L+ + V+QGG +RK
Sbjct: 246 YHQVAKLSKFSGGIGIAWSRVRGRGALIRGTNGKSNGIVPFLKTLDAGVAAVNQGG-RRK 304
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA VYLEPWH D+ EFL+LR N G+E R +L A W+PD FM RV+++ WSL P+
Sbjct: 305 GAACVYLEPWHPDVEEFLELRDNTGEESRRTHNLNLANWIPDEFMRRVEADEDWSLIDPS 364
Query: 355 EAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKK 414
+AP L D +G F Y EK KA K ++A+ L+ ++++ +TG +M FKD N
Sbjct: 365 DAPELPDLFGDAFTEAYRIAEK--KAVKKIKARELYGRMMRTLAQTGNGWMTFKDRSNAL 422
Query: 415 SNQQNL--GTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGS 472
SNQ TI SNLCTE+++ S ETAVCNL SI L + GV
Sbjct: 423 SNQTGAPGNTIHLSNLCTEILEVNSDDETAVCNLGSINLGAHTTADGV------------ 470
Query: 473 RGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
D+E+L L+++ID+NYYP + A SN R RP+G+G+ GL D F
Sbjct: 471 --------DWERLRATVRTAVVFLDRVIDINYYPSQQAAVSNPRWRPVGLGLMGLQDAFF 522
Query: 533 LLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGV 592
L +PFDS A++L+ + E I+ +L S+ +A + G + Y + ++G L P++WG
Sbjct: 523 TLRLPFDSPAAKELSTRVQEEIFLTSLEASAGLAEQFGAHPAYAETRAAQGDLHPELWGA 582
Query: 593 NPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGE 652
+ W +++ I+ +G+RNSLLVA PTA+ + I G EC EP SN++ R +SGE
Sbjct: 583 PMTQGARWAAVKERIAAHGLRNSLLVAIAPTATIASIAGCYECIEPQVSNLFKRETMSGE 642
Query: 653 FVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVD 712
F+ +N +L+ +L GLW+P I+ I +GSVQ I +P ++K I++T WE+ Q+ L+D
Sbjct: 643 FLQINNYLVRELKSRGLWTPEIREAIKRAEGSVQDIAALPADVKEIFRTAWELPQRALID 702
Query: 713 MAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAA 763
+A R +ID SQSLN+ + P GKL+S++ +AW GLKT YYLRSR A
Sbjct: 703 LAAARAPFIDQSQSLNLFLAAPTIGKLSSMYLYAWKSGLKTS-YYLRSRPA 752
>gi|256391239|ref|YP_003112803.1| ribonucleoside-diphosphate reductase subunit alpha [Catenulispora
acidiphila DSM 44928]
gi|256357465|gb|ACU70962.1| ribonucleoside-diphosphate reductase, alpha subunit [Catenulispora
acidiphila DSM 44928]
Length = 841
Score = 574 bits (1480), Expect = e-161, Method: Compositional matrix adjust.
Identities = 310/778 (39%), Positives = 447/778 (57%), Gaps = 54/778 (6%)
Query: 39 VSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTK----KSF 94
V +K G+ G Q+ +LA ++AA + P Y+ LAAR++ + + SF
Sbjct: 107 VVRKTFAGLPPGAGADQVADLAVQSAAELIGEEPQYSKLAARLLSGVIAREAAGQGATSF 166
Query: 95 SETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERS 154
S ++ G + LI D +I AAR D+ I D ++YFG +T+
Sbjct: 167 SASVA---------VGHREGLIGDVTEALITGAAARFDAAIDPAGDLRFEYFGLRTVYDR 217
Query: 155 YLLK--VQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPR 212
YLL+ V +V+E PQH L+RVA G+ +D A+ Y +MS + +SPTLFN+GT
Sbjct: 218 YLLRHPVTRRVIETPQHFLLRVAAGLSQDP-QEAVGFYRLMSSLAYLPSSPTLFNSGTRH 276
Query: 213 AQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGI 272
Q+SSC+LV D ++ IYD + A +SK AGGIG+ +R+ G+ IR TNG SNGI
Sbjct: 277 TQMSSCYLVDSPLDELDSIYDRYHQVARLSKFAGGIGIGFSRVRSRGALIRSTNGRSNGI 336
Query: 273 VPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYAL 332
VP LR + + V+QGG +RKGA VYLEPWH DI EFL LR N G++ R +L A
Sbjct: 337 VPFLRTLDSSVAAVNQGG-RRKGAACVYLEPWHPDIEEFLQLRDNTGEDARRTHNLNLAN 395
Query: 333 WVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFE 392
W+PD FM RV+++G+WSL P++ P L D WG EF+ Y K E EG+ + V A+ L+ +
Sbjct: 396 WIPDEFMRRVEADGVWSLMDPDQVPELPDLWGAEFDAAYRKAEAEGRYSRQVSARELYGK 455
Query: 393 ILKSQIETGTPYMLFKDTCNKKSNQQNL--GTIKSSNLCTEVIQYTSPTETAVCNLASIA 450
++++ +TG +M FKD N+ NQ + T+ SNLCTE+I+ +S TETAVCNL SI
Sbjct: 456 MMRTLAQTGNGWMTFKDASNQLCNQTGVPGNTVHLSNLCTEIIEVSSDTETAVCNLGSIN 515
Query: 451 LPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETA 510
L + L +R + D+++L L+++ID+NYYP E
Sbjct: 516 LA--------------AHLTPARDA----VDWDRLRATVRTAVVFLDRVIDINYYPSEQT 557
Query: 511 RRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREG 570
SN R RP+G+G+ GL D F L +PFD A++L+ I E IY AL TS+ +A G
Sbjct: 558 AASNPRWRPVGLGLMGLQDVFFALRLPFDDERARELSTRISEEIYLTALETSAGLAEEFG 617
Query: 571 PYETYHGSPVSKGILQPDMWGV--NPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQ 628
+ + + +KG LQPD+W V +P W +R ++ G+RNSLLVA PTA+ +
Sbjct: 618 AHPAFADTRAAKGDLQPDLWNVATSPELATRWNAVRGRVAATGLRNSLLVAIAPTATIAS 677
Query: 629 ILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKI 688
I G EC EP SN++ R LSGEF+ +N L+ +L +GLW+P ++ I +GSVQ +
Sbjct: 678 IAGCYECIEPQVSNLFKRETLSGEFLQINSALVGELKALGLWTPAVREAIKRAEGSVQGV 737
Query: 689 PQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWL 748
+P E++A+Y+T WE+ Q+ L+D+A RG +ID SQSLN+ + P GKL+S++ +AW
Sbjct: 738 EALPAEVRALYRTAWELPQRALIDLAAARGPFIDQSQSLNLFLAAPTIGKLSSMYMYAWK 797
Query: 749 RGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
GLK+ YYLRSR A + TV + + CSL N E C AC
Sbjct: 798 AGLKS-TYYLRSRPATRIQQATVAVA--------------AEEAVACSLENPESCEAC 840
>gi|408680595|ref|YP_006880422.1| Ribonucleotide reductase of class Ia (aerobic),alpha subunit
[Streptomyces venezuelae ATCC 10712]
gi|328884924|emb|CCA58163.1| Ribonucleotide reductase of class Ia (aerobic),alpha subunit
[Streptomyces venezuelae ATCC 10712]
Length = 792
Score = 574 bits (1479), Expect = e-161, Method: Compositional matrix adjust.
Identities = 317/785 (40%), Positives = 450/785 (57%), Gaps = 46/785 (5%)
Query: 35 DPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNT--KK 92
DP V+ G ++L ELA E AA + P Y+ LAAR++ + +
Sbjct: 40 DPGKVAAAALRGRSAAADEAELRELATEAAAGLIAEDPAYSRLAARLLTVTIADEAAGQG 99
Query: 93 SFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLE 152
+FS + H R GL IAD + + +A RLD+ I D + YFG +TL
Sbjct: 100 AFSFSASVAVGH---REGL----IADRTAEFVALHADRLDATIDPAGDDRFGYFGLRTLY 152
Query: 153 RSYLLK--VQGKVVERPQHMLMRVAVGIHKDD----IDSAIKTYHMMSQRWFTHASPTLF 206
YLL+ + KV+E PQH ++RVA G+ +DD +D Y +MS+ + +SPTLF
Sbjct: 153 SRYLLRHPITRKVIETPQHFMLRVACGLAEDDSVRALDEVSALYGLMSRLDYLPSSPTLF 212
Query: 207 NAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTN 266
N+GT Q+SSC+L+ D ++ IYD + A +SK AGGIG+S IRA GS IRGTN
Sbjct: 213 NSGTRHPQMSSCYLLDSPQDELDSIYDRYHQVARLSKHAGGIGLSYSRIRARGSLIRGTN 272
Query: 267 GTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRAR 326
G SNGIVP L+ + + V+QGG +RKGA AVYLE WHADI EFL+LR N G++ R
Sbjct: 273 GHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHADIEEFLELRDNTGEDARRTH 331
Query: 327 DLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQA 386
+L A W+PD FM RV ++ WSLF P + P L D WG EF+ Y K E G A+K + A
Sbjct: 332 NLNLAHWIPDEFMRRVNADADWSLFSPADVPELVDLWGEEFDAAYRKAEAAGLARKTMPA 391
Query: 387 QNLWFEILKSQIETGTPYMLFKDTCNKKSNQ--QNLGTIKSSNLCTEVIQYTSPTETAVC 444
++L+ ++++ +TG +M FKD N+ +NQ + T+ SSNLCTE+++ T ETAVC
Sbjct: 392 RDLYGRMMRTLAQTGNGWMTFKDASNRTANQTAEPGHTVHSSNLCTEILEVTDDGETAVC 451
Query: 445 NLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNY 504
NL S+ L +V VGS D+E+L L++++D+N+
Sbjct: 452 NLGSVNLGAFV--------------VGSD------IDWERLDATVRTAVTFLDRVVDINF 491
Query: 505 YPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSE 564
YP E A RSN R RP+G+G GL D F L +PFDS EA+ L+ I E I A S++
Sbjct: 492 YPTEQAGRSNARWRPVGLGAMGLQDVFFQLKLPFDSAEARALSTRIAERIMLAAYEASAD 551
Query: 565 IAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTA 624
+A R GP + + ++G+L PD + V + W LR+ I+ G+RNSLL+A PTA
Sbjct: 552 LAERNGPLPAWEKTRTARGVLHPDHYDVELNWPERWAALRERIAAVGMRNSLLLAIAPTA 611
Query: 625 STSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGS 684
+ + I G EC EP SN++ R LSGEF+ VN +L+ +L ++G+W + + +GS
Sbjct: 612 TIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVDELKKLGVWDAQTREALRESNGS 671
Query: 685 VQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHF 744
V +P E++ +Y+T WEI Q+ L+DMA R ++D SQSLN+ ++ P GKL+S++
Sbjct: 672 VAGFTWVPAEVRELYRTAWEIPQRGLIDMAAARTPFLDQSQSLNLFLETPTIGKLSSMYA 731
Query: 745 HAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKV---TDDDDAKMAQMVCSLTNRE 801
+AW +GLKT YYLRSR A + + V T D DA + CSL N E
Sbjct: 732 YAWKQGLKT-TYYLRSRPATRIARAAQAAAPAAATIPVQQATPDADA----LACSLENPE 786
Query: 802 ECMAC 806
C AC
Sbjct: 787 SCEAC 791
>gi|294631327|ref|ZP_06709887.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
sp. e14]
gi|292834660|gb|EFF93009.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
sp. e14]
Length = 798
Score = 573 bits (1478), Expect = e-160, Method: Compositional matrix adjust.
Identities = 310/787 (39%), Positives = 454/787 (57%), Gaps = 49/787 (6%)
Query: 34 CDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKS 93
DP V+ G ++L ELA E +A + + P Y+ LAAR++ +
Sbjct: 46 ADPGRVAAAALRGRSARADEAELRELATEASAGLISEDPAYSRLAARLLTLTIRAEAASQ 105
Query: 94 ----FSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFK 149
F+E++ G + LIAD + + +A RLD+ + D + YFG +
Sbjct: 106 GVTRFTESVA---------VGHREGLIADRTAEFVRLHAERLDAAVDPAADDRFGYFGLR 156
Query: 150 TLERSYLLK--VQGKVVERPQHMLMRVAVGIHKDDIDSAI----KTYHMMSQRWFTHASP 203
TL YLL+ + KV+E PQH ++RVA G+ +D D A+ Y +MS+ + +SP
Sbjct: 157 TLHSRYLLRHPITRKVIETPQHFMLRVASGLAQDATDHAVDEVTALYGLMSRLDYLPSSP 216
Query: 204 TLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT Q+SSC+L+ D ++ IYD + A +SK AGGIG++ IR+ GS IR
Sbjct: 217 TLFNSGTRHPQMSSCYLLDSPQDELDSIYDRYHQVARLSKHAGGIGIAYSRIRSRGSLIR 276
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEH 323
GTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WH+DI EFL+LR N G++
Sbjct: 277 GTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTGEDAR 335
Query: 324 RARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKV 383
R +L A WVPD FM RV ++G WSLF P++ P L D WG EF+ Y E+ G A+K
Sbjct: 336 RTHNLNLAHWVPDEFMRRVNADGQWSLFSPSDVPELVDLWGAEFDAAYRAAEERGLARKT 395
Query: 384 VQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQ--QNLGTIKSSNLCTEVIQYTSPTET 441
+ A+ L+ ++++ +TG +M FKD N+ +NQ + I SSNLCTE+++ T ET
Sbjct: 396 MPARELYGRMMRTLAQTGNGWMTFKDAANRTANQTAEPGHVIHSSNLCTEILEVTDDGET 455
Query: 442 AVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIID 501
AVCNL S+ L +VR+ + D+E+L E L++++D
Sbjct: 456 AVCNLGSVNLGAFVRDGDI--------------------DWERLDETVRTAVTFLDRVVD 495
Query: 502 VNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRT 561
+N+YP E A RSN R RP+G+G GL D F L +PFDS A+ L+ I E I A
Sbjct: 496 INFYPTEQAGRSNARWRPVGLGAMGLQDVFFKLRLPFDSAGARALSTRIAERIMLAAYEA 555
Query: 562 SSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPM 621
S+++A R GP + + ++G+L PD + V+ + W LR+ I+ G+RNSLL+A
Sbjct: 556 SADLAERHGPLPAWEKTRAARGVLHPDHYDVSLTWPERWTALRERIAAVGMRNSLLLAIA 615
Query: 622 PTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYD 681
PTA+ + I G EC EP SN++ R LSGEF+ VN +L++DL +G+W + +
Sbjct: 616 PTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVNDLKALGVWDARTREALRDS 675
Query: 682 DGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTS 741
+GSVQ IP +++A+Y+T WEI Q+ L+DMA R ++D +QSLN+ ++ P GKL+S
Sbjct: 676 NGSVQDFAWIPADVRALYRTAWEIPQRGLIDMAAARTPFLDQAQSLNLFLETPTIGKLSS 735
Query: 742 LHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN--PKVTDDDDAKMAQMVCSLTN 799
++ +AW +GLKT YYLRSR A + + + + T D DA + CSL N
Sbjct: 736 MYAYAWKQGLKT-TYYLRSRPATRIARAAQGRTPAEAALPAQQTADPDA----VACSLEN 790
Query: 800 REECMAC 806
E C AC
Sbjct: 791 PESCEAC 797
>gi|297192179|ref|ZP_06909577.1| class Ia ribonucleotide-diphosphate reductase large subunit protein
[Streptomyces pristinaespiralis ATCC 25486]
gi|297151244|gb|EDY64084.2| class Ia ribonucleotide-diphosphate reductase large subunit protein
[Streptomyces pristinaespiralis ATCC 25486]
Length = 800
Score = 573 bits (1477), Expect = e-160, Method: Compositional matrix adjust.
Identities = 315/803 (39%), Positives = 460/803 (57%), Gaps = 55/803 (6%)
Query: 19 TARLKKLS-YGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASL 77
TA L+ L+ + DP V+ G G ++L LA E AA + + P Y+ L
Sbjct: 37 TALLRTLTDLTADLPDTDPGKVAAAALRGRNAGSDAAELHSLATEAAAGLISEDPAYSRL 96
Query: 78 AARIVVSNLHKNTK----KSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDS 133
AAR++ + + SF+ ++ +G + LIAD + +AARLD+
Sbjct: 97 AARLLTRTIAEEAAGQGASSFTASVA---------TGHREGLIADRTAAFVALHAARLDA 147
Query: 134 EIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRVAVGIHKDDIDSAIKT-- 189
I D + YFG +TL YLL+ + +V+E PQH ++RVA G+ +DD A++
Sbjct: 148 LIDLGADDRFGYFGLRTLYSRYLLRHPITRQVIETPQHFMLRVACGLAEDDSPRALEEVA 207
Query: 190 --YHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGG 247
Y +MS+ + +SPTLFN+GT Q+SSC+L+ D ++ IY + A +SK AGG
Sbjct: 208 ALYRLMSRLDYLPSSPTLFNSGTRHPQMSSCYLLDSPLDELDSIYGRYHQVARLSKHAGG 267
Query: 248 IGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHAD 307
IG+S IRA GS IRGTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WHAD
Sbjct: 268 IGLSYSRIRARGSLIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHAD 326
Query: 308 IFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEF 367
I EFL+LR N G++ R +L A W+PD FM RV+++ WSLF P + P L D WG +F
Sbjct: 327 IEEFLELRDNTGEDARRTHNLNLAHWIPDEFMRRVEADAQWSLFSPVDVPELVDLWGEDF 386
Query: 368 ERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQ--QNLGTIKS 425
+ Y + E G A++ V A++L+ ++++ +TG +M FKD N+ +NQ + + S
Sbjct: 387 DAAYRRAEAAGLARRTVSARDLYGRMMRTLAQTGNGWMTFKDASNRTANQTAEPGRVVHS 446
Query: 426 SNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKL 485
SNLCTE+++ T ETAVCNL S+ L +V G+ D+E+L
Sbjct: 447 SNLCTEILEVTDDGETAVCNLGSVNLGAFVSGDGI--------------------DWERL 486
Query: 486 AEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQ 545
L++++D+N+YP E A RSN R RP+G+G GL D F L +PFDS EA+
Sbjct: 487 DATVRTAVTFLDRVVDINFYPTEQAGRSNARWRPVGLGAMGLQDVFFKLRLPFDSAEARA 546
Query: 546 LNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWG--VNPSDRWDWGGL 603
L+ I E I A S ++A R GP + + ++G+L PD + +N +RW+ L
Sbjct: 547 LSTRIAERIMLAAYEASCDLAERNGPLPAWAETRTARGVLHPDHYDTTLNWPERWE--AL 604
Query: 604 RDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHD 663
R ++ G+RNSLL+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ D
Sbjct: 605 RARVAAVGMRNSLLLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVDD 664
Query: 664 LTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDH 723
L +G+W + + GSVQ +PEE++A+Y+T WEI Q+ L+DMA R ++D
Sbjct: 665 LKRLGVWDAQTREALREASGSVQGFTWVPEEIRALYRTAWEIPQRGLIDMAAARTPFLDQ 724
Query: 724 SQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVT 783
SQSLN+ ++ P GKL+S++ +AW +GLKT YYLRSR A + + +VT
Sbjct: 725 SQSLNLFLETPTIGKLSSMYAYAWKQGLKT-TYYLRSRPATRIARAASAAVPVPA--QVT 781
Query: 784 DDDDAKMAQMVCSLTNREECMAC 806
+D + CSL N E C AC
Sbjct: 782 PED-----AVACSLENPESCEAC 799
>gi|297202282|ref|ZP_06919679.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
sviceus ATCC 29083]
gi|197710198|gb|EDY54232.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
sviceus ATCC 29083]
Length = 796
Score = 573 bits (1476), Expect = e-160, Method: Compositional matrix adjust.
Identities = 304/771 (39%), Positives = 446/771 (57%), Gaps = 55/771 (7%)
Query: 54 SQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKK----SFSETIKDMYNHYNERS 109
++L ELA E AA + + P Y+ LAAR++ ++ SF+ ++
Sbjct: 62 AELRELATEAAAGLISEDPAYSRLAARLLTVSIAAEAASQGVTSFTGSVA---------V 112
Query: 110 GLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERP 167
G + LIAD + + +A RLD+ + + D + YFG +TL YLL+ + KV+E P
Sbjct: 113 GHREGLIADRTAEFVRVHAERLDALVDTEADDRFGYFGLRTLYSRYLLRHPITRKVIETP 172
Query: 168 QHMLMRVAVGIHKDDI----------DSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSS 217
QH ++RVA G+ D + D Y +MS+ + +SPTLFN+GT Q+SS
Sbjct: 173 QHFMLRVASGLADDTVLDSETGAHALDEVAALYRLMSRLDYLPSSPTLFNSGTRHPQMSS 232
Query: 218 CFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLR 277
C+L+ D ++ IYD + A +SK AGGIG+S IR+ GS IRGTNG SNGIVP L+
Sbjct: 233 CYLLDSPKDELDSIYDRYHQVANLSKHAGGIGISYSRIRSRGSLIRGTNGHSNGIVPFLK 292
Query: 278 VFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDL 337
+ + V+QGG +RKGA AVYLE WH+DI EFL+LR N G++ R +L A WVPD
Sbjct: 293 TLDASVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTGEDARRTHNLNLAHWVPDE 351
Query: 338 FMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQ 397
FM RV ++ WSLF P + P L D WG EF+ Y K E EG A++ + A++L+ ++++
Sbjct: 352 FMRRVNADAEWSLFSPADVPELVDLWGEEFDAAYRKAEAEGLARRTIPARDLYGRMMRTL 411
Query: 398 IETGTPYMLFKDTCNKKSNQQNLG--TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYV 455
+TG +M FKD N+ +NQ L T+ SSNLCTE+++ T ETAVCNL S+ L +V
Sbjct: 412 AQTGNGWMTFKDAANRTANQTALPGHTVHSSNLCTEILEVTDDGETAVCNLGSVNLGAFV 471
Query: 456 REMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNL 515
+ + D+E+L L++++D+N+YP E A RSN
Sbjct: 472 ------------------DTTSGDIDWERLDATVRTAVTFLDRVVDINFYPTEQAGRSNA 513
Query: 516 RHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETY 575
+ RP+G+G GL D F L +PFDS EA+ L+ I E I A S+++A R GP +
Sbjct: 514 KWRPVGLGAMGLQDVFFKLRLPFDSPEARALSTRIAERIMLAAYEASADLAERSGPLPAW 573
Query: 576 HGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNEC 635
+ ++G+L PD + + + W LR+ ++ G+RNSLL+A PTA+ + I G EC
Sbjct: 574 EKTRTAQGVLHPDHYATDLAWPERWAALRERMAVTGLRNSLLLAIAPTATIASIAGVYEC 633
Query: 636 FEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEEL 695
EP SN++ R LSGEF+ VN +L+ +L ++G+W + + +GSVQ IPE++
Sbjct: 634 IEPQVSNLFKRETLSGEFLQVNSYLVAELKKLGVWDARTREALREANGSVQGFAWIPEDV 693
Query: 696 KAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGM 755
+A+Y+T WEI Q+ L+DMA R ++D +QSLN+ ++ P GKL+S++ +AW GLKT
Sbjct: 694 RALYRTAWEIPQRGLIDMAAARTPFLDQAQSLNLFLETPTIGKLSSMYAYAWKSGLKT-T 752
Query: 756 YYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
YYLRSR A I +V + P D + CSL N E C AC
Sbjct: 753 YYLRSRPATR-IARAAQATVPVQQPAPED-------AVACSLENPESCEAC 795
>gi|441155686|ref|ZP_20966845.1| ribonucleoside-diphosphate reductase subunit alpha [Streptomyces
rimosus subsp. rimosus ATCC 10970]
gi|440617881|gb|ELQ80968.1| ribonucleoside-diphosphate reductase subunit alpha [Streptomyces
rimosus subsp. rimosus ATCC 10970]
Length = 817
Score = 572 bits (1474), Expect = e-160, Method: Compositional matrix adjust.
Identities = 319/812 (39%), Positives = 463/812 (57%), Gaps = 56/812 (6%)
Query: 19 TARLKKLS-YGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASL 77
TA L+ L+ ++ DP ++ G + G ++L LA E AA + + P Y+ L
Sbjct: 37 TALLRTLTDLTADLDATDPGKIAAAALRGRHAGSDEAELRSLAMEAAAGLIGDEPQYSKL 96
Query: 78 AARIVV----SNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDS 133
AAR++ +FS ++ +G + LIADD + + +AARLD+
Sbjct: 97 AARLLTRAIAEEAAAEGATAFSASVA---------TGHREGLIADDTAEFVRTHAARLDA 147
Query: 134 EIIYDR------DFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRVAVGIHKDD--- 182
+ DR D + YFG +TL YLL+ + +V+E PQH L+RVA G+ +D
Sbjct: 148 --LVDRALADGADDRFGYFGLRTLHSRYLLRHPISRQVIETPQHFLLRVACGLAEDHSER 205
Query: 183 -IDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAII 241
+D + Y + S + +SPTLFN+GT Q+SSC+L+ D ++ IYD + A +
Sbjct: 206 AVDDVAELYRLTSTLSYLPSSPTLFNSGTRHPQMSSCYLLDSPLDELDSIYDRYHQVARL 265
Query: 242 SKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYL 301
SK AGGIG+S +RA GS IRGTNG SNGIVP LR + + V+QGG +RKGA VYL
Sbjct: 266 SKHAGGIGLSYSRVRARGSLIRGTNGHSNGIVPFLRTLDASVAAVNQGG-RRKGAACVYL 324
Query: 302 EPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLAD 361
E WHAD+ EFL+LR N G++ R +L A W+PD FM RV+++ WSLF P++ P L D
Sbjct: 325 ETWHADLEEFLELRDNTGEDARRTHNLNIAHWIPDEFMRRVEADADWSLFSPSDVPELVD 384
Query: 362 CWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQ--QN 419
+G EF+ Y K E G A K V A+ L+ ++++ +TG +M FKD N+ +NQ +
Sbjct: 385 LYGDEFDTAYRKAEAAGLAVKQVPARILYARMMRTLAQTGNGWMTFKDAANRTANQTAEP 444
Query: 420 LGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRY 479
+ SSNLCTE+++ T ETAVCNL S+ L ++ E
Sbjct: 445 GKVVHSSNLCTEILEVTDDGETAVCNLGSVNLAAHLGNEANGWEE--------------A 490
Query: 480 FDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFD 539
D+E+L L++++D+N+YP E A SN R RP+G+G+ GL D F L + FD
Sbjct: 491 MDWERLDATVRTAVTFLDRVVDINFYPTEQAGASNSRWRPVGLGLMGLQDVFFRLRLGFD 550
Query: 540 STEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRW- 598
S EA++L+ I E I A S+++A R GP+ + + ++G+L PD + N RW
Sbjct: 551 SPEARELSTRISERIMLAAYEASADLAERHGPHPAWSATRTARGVLHPDHY-PNAEPRWA 609
Query: 599 -DWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
W LR I+ G+RNSLL+A PTA+ + I G EC EP SN++ R LSGEF+ VN
Sbjct: 610 DRWAALRTRIAATGMRNSLLLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVN 669
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
+L+ +L +GLW ++ + +GSVQ++ IP E++ +Y+T WEI Q+ L+DMA DR
Sbjct: 670 AYLIEELKALGLWDERTRDALREGNGSVQELDWIPAEIRELYRTAWEIPQRALIDMAADR 729
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAA---ADAIKFTVDTS 774
Y+D SQSLN+ M P GKL+S++ +AW RG+KT YYLRSR A A + + T +
Sbjct: 730 TPYLDQSQSLNLFMASPTIGKLSSMYAYAWKRGIKT-TYYLRSRPATRIAQSARGTGGGA 788
Query: 775 VLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
P D +A + CSL N E C AC
Sbjct: 789 QPAPVPTQAADPEA----VACSLENPESCEAC 816
>gi|254384640|ref|ZP_04999979.1| ribonucleoside-diphosphate reductase alpha chain [Streptomyces sp.
Mg1]
gi|194343524|gb|EDX24490.1| ribonucleoside-diphosphate reductase alpha chain [Streptomyces sp.
Mg1]
Length = 797
Score = 571 bits (1472), Expect = e-160, Method: Compositional matrix adjust.
Identities = 314/790 (39%), Positives = 455/790 (57%), Gaps = 54/790 (6%)
Query: 35 DPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTK--- 91
DP V+ G ++L LA E AA + + P Y+ LAAR++ +
Sbjct: 43 DPGRVAAAALRGRSAAADEAELRSLATEAAAGLISEDPAYSRLAARLLTLAVRDEAAGQG 102
Query: 92 -KSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIY----DRDFDYDYF 146
SFS ++ G + LIAD + +AARLD+ + Y D + +F
Sbjct: 103 ATSFSASVA---------VGHREGLIADRTAAFVEAHAARLDALVEYTLAEGADDRFGFF 153
Query: 147 GFKTLERSYLLK--VQGKVVERPQHMLMRVAVGIHKDD----IDSAIKTYHMMSQRWFTH 200
G +TL YLL+ + +VVE PQH ++RVA G+ D+ ++ Y +MS+ +
Sbjct: 154 GLRTLHSRYLLRHPITRQVVETPQHFMLRVACGLAADESVQAVEEVASLYRLMSRLDYLP 213
Query: 201 ASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGS 260
+SPTLFN+GT Q+SSC+L+ D ++ IYD + A +SK AGGIG+S IRA GS
Sbjct: 214 SSPTLFNSGTRHPQMSSCYLLDSPLDELDSIYDRYHQVARLSKHAGGIGLSYSRIRARGS 273
Query: 261 YIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGK 320
IRGTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WHADI EFL+LR N G+
Sbjct: 274 LIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHADIEEFLELRDNTGE 332
Query: 321 EEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKA 380
++ R +L A WVPD FM RV ++ WSLF P + P L D WG +F+ Y K E +G A
Sbjct: 333 DQRRTHNLNLAHWVPDEFMRRVNADADWSLFSPADVPELVDLWGDDFDAAYRKAEADGLA 392
Query: 381 KKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQ-QNLGTI-KSSNLCTEVIQYTSP 438
+K + A++L+ ++++ +TG +M FKD N+ +NQ GT+ SSNLCTE+I+ T+
Sbjct: 393 RKTMPARDLYGRMMRTLAQTGQGWMTFKDASNRTANQTAEPGTVVHSSNLCTEIIEVTND 452
Query: 439 TETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNK 498
ETAVCNL S+ L +V ++ D+E+L E L++
Sbjct: 453 GETAVCNLGSVNLGAFVL------------------TETGEIDWERLDETVRTAVTFLDR 494
Query: 499 IIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHA 558
++D+N+YP E A RSN R RP+G+G GL D F L +PFDS EA+ L+ + E I A
Sbjct: 495 VVDINFYPTEQAGRSNARWRPVGLGAMGLQDVFFKLKLPFDSPEAKALSTKLSERIMLAA 554
Query: 559 LRTSSEIAAREGPYETYHGSPVSKGILQPDMWG--VNPSDRWDWGGLRDMISKNGVRNSL 616
S ++A R GP + + ++G+L PD + +N +RWD LR ++++G+RNSL
Sbjct: 555 YEASCDLAERSGPLPAWEQTRTARGVLHPDHYDTELNWPERWD--ALRARVAESGMRNSL 612
Query: 617 LVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKN 676
L+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ +L ++G+W +
Sbjct: 613 LLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNGYLVEELKKLGVWDAQSRE 672
Query: 677 KIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNF 736
+ GSVQ IP E++ +Y+T WEI Q+ L+DMA R ++D SQSLN+ ++ P
Sbjct: 673 ALREASGSVQGFGWIPAEVRELYRTAWEIPQRGLIDMAAARTPFLDQSQSLNLFLETPTI 732
Query: 737 GKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAKMAQMVCS 796
GKL+S++ +AW +GLKT YYLRSR A I + P+ D +A + CS
Sbjct: 733 GKLSSMYAYAWKQGLKT-TYYLRSRPATK-IARAAQAATPVALPQAVVDAEA----LACS 786
Query: 797 LTNREECMAC 806
L N E C AC
Sbjct: 787 LENPESCEAC 796
>gi|345848583|ref|ZP_08801603.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
zinciresistens K42]
gi|345639928|gb|EGX61415.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
zinciresistens K42]
Length = 767
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 308/784 (39%), Positives = 452/784 (57%), Gaps = 37/784 (4%)
Query: 31 IEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNT 90
+ DP V+ G ++L ELA E AA + + P Y+ LAAR++ ++
Sbjct: 12 LPDADPGRVAAAALRGRSARADEAELRELATEAAAGLISEDPAYSRLAARLLTLSI---A 68
Query: 91 KKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKT 150
++ S+ + +G + LIAD + +AARLD+ + D + YFG +T
Sbjct: 69 AEAASQGVTSFTGSVG--TGHREGLIADRTAAFVRTHAARLDALVDPGADDRFGYFGLRT 126
Query: 151 LERSYLLK--VQGKVVERPQHMLMRVAVGIHKDD----IDSAIKTYHMMSQRWFTHASPT 204
L YLL+ + KVVE PQH L+RVA G+ +DD ++ Y +MS+ + +SPT
Sbjct: 127 LHSRYLLRHPLTRKVVETPQHFLLRVAAGLAEDDSARSLEEVAALYGLMSRLDYLPSSPT 186
Query: 205 LFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRG 264
LFN+GT Q+SSC+L+ D ++ +YD + A +SK AGGIG+S +R+ GS IRG
Sbjct: 187 LFNSGTRHPQMSSCYLLDSPKDELDSLYDRYHQVARLSKHAGGIGLSYSRVRSRGSLIRG 246
Query: 265 TNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHR 324
TNG SNGIVP L+ + + V+QGG +RKGA AVYLE WH+DI EFL+LR N G++ R
Sbjct: 247 TNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTGEDARR 305
Query: 325 ARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVV 384
+L A W+PD FM RV ++ WSLF P++ P L D WG EF+ Y K E G A++ +
Sbjct: 306 THNLNLAHWIPDEFMRRVDADRPWSLFSPSDVPELVDLWGEEFDAAYAKAEAAGLARRTL 365
Query: 385 QAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL--GTIKSSNLCTEVIQYTSPTETA 442
A+ L+ ++++ +TG +M FKD N+ +NQ L + SSNLCTE+++ T ETA
Sbjct: 366 PARELYGRMMRTLAQTGNGWMTFKDAANRTANQTALPGNVVHSSNLCTEILEVTDDGETA 425
Query: 443 VCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDV 502
VCNL S+ L +VR+ + D+E+L E L++++D+
Sbjct: 426 VCNLGSVNLGAFVRDGDL--------------------DWERLDETVRTAVTFLDRVVDI 465
Query: 503 NYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTS 562
N+YP E A RSN + RP+G+G GL D F L +PFDS EA+ L+ I E + A S
Sbjct: 466 NFYPTEQAGRSNAKWRPVGLGAMGLQDVFFQLRLPFDSPEARALSTRIAERVMLAAYEAS 525
Query: 563 SEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMP 622
+++A R GP + + ++G+L PD +G P+ W LR+ I+ G+RNSLL+A P
Sbjct: 526 ADLAERNGPLPAWEKTRTARGVLHPDHYGTAPAWPERWAALRERIAVTGLRNSLLLAIAP 585
Query: 623 TASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDD 682
TA+ + I G EC EP SN++ R LSGEF+ VN +L+ +L +G+W + +
Sbjct: 586 TATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVDELKALGVWDARTREALRDAS 645
Query: 683 GSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSL 742
GSVQ IP +++A+Y+T WEI Q+ L+DMA R Y+D SQSLN+ ++ P GKL+S+
Sbjct: 646 GSVQDFAWIPADVRALYRTAWEIPQRALIDMAAARTPYLDQSQSLNLFLETPTIGKLSSM 705
Query: 743 HFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAKMAQMVCSLTNREE 802
+ +AW GLKT YYLRSR A + + + V D + + CSL N E
Sbjct: 706 YAYAWKSGLKT-TYYLRSRPATRIARAARAQARPEATVPVRQAADPE--AVACSLENPES 762
Query: 803 CMAC 806
C AC
Sbjct: 763 CEAC 766
>gi|455647608|gb|EMF26550.1| ribonucleoside-diphosphate reductase subunit alpha [Streptomyces
gancidicus BKS 13-15]
Length = 772
Score = 570 bits (1469), Expect = e-159, Method: Compositional matrix adjust.
Identities = 312/785 (39%), Positives = 447/785 (56%), Gaps = 51/785 (6%)
Query: 34 CDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKK- 92
DP V+ G ++L ELA E AA + + P Y+ LAAR++ +
Sbjct: 26 ADPGRVAAAALRGRSAAADEAELRELATEAAAGLISEDPAYSRLAARLLTLAIRAEAASQ 85
Query: 93 ---SFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFK 149
SF+ ++ +G + LIAD + +AARLD+ I D + YFG +
Sbjct: 86 GVTSFTGSVA---------TGHREGLIADRTAAFVRLHAARLDALIDTGADDRFGYFGLR 136
Query: 150 TLERSYLLK--VQGKVVERPQHMLMRVAVGIHKDDIDSAIKT----YHMMSQRWFTHASP 203
TL YLL+ V KVVE PQH L+RVA G+ +DD A++ Y +MS+ + +SP
Sbjct: 137 TLHSRYLLRHPVTRKVVETPQHFLLRVACGLAEDDSARALEEVAALYGLMSRLDYLPSSP 196
Query: 204 TLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT Q+SSC+L+ D ++ +Y+ + A +SK AGGIG+S +RA GS IR
Sbjct: 197 TLFNSGTRHPQMSSCYLLDSPADELDSLYERYHQVARLSKHAGGIGLSFSRVRARGSLIR 256
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEH 323
GTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WHADI EFL+LR N G++
Sbjct: 257 GTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHADIEEFLELRDNTGEDAR 315
Query: 324 RARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKV 383
R +L A WVPD FM RV + WSLF P + P L D WG EF+ Y E +G A++
Sbjct: 316 RTHNLNLAHWVPDEFMRRVADDAPWSLFSPVDVPELVDLWGEEFDAAYRAAEAKGLARRT 375
Query: 384 VQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQ--QNLGTIKSSNLCTEVIQYTSPTET 441
+ A+ L+ ++++ +TG +M FKDT N+ +NQ + + SSNLCTE+++ T ET
Sbjct: 376 LPARELYGRMMRTLAQTGNGWMTFKDTANRTANQTAEPGHVVHSSNLCTEILEVTDDGET 435
Query: 442 AVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIID 501
AVCNL S+ L + G+ D+E+L L++++D
Sbjct: 436 AVCNLGSVNLAAFADGDGM--------------------DWERLDAAVRTAVTFLDRVVD 475
Query: 502 VNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRT 561
+N+YP E A RSN R RP+G+GV GL D + +PFDS EA++L+ I E I A T
Sbjct: 476 INFYPTEEASRSNSRWRPVGLGVMGLQDVLFRMRLPFDSPEARELSTRIAERIMLAAYET 535
Query: 562 SSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPM 621
S+ +A R GP + + ++G+L PD +GV + W LR I+ G+RN+LL+A
Sbjct: 536 SAALAERHGPLPAWEKTRTARGVLHPDHYGVELAWPERWAALRTRIAATGLRNALLLAIA 595
Query: 622 PTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYD 681
PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ DL +G+W + +
Sbjct: 596 PTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVEDLKRLGVWDARTREALREA 655
Query: 682 DGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTS 741
GSVQ IPE+++ +Y+T WEI Q+ L+DMA R ++D +QSLN+ ++ P GKL+S
Sbjct: 656 GGSVQDFAWIPEDVRRLYRTAWEIPQRGLIDMAAARTPFLDQAQSLNLFLETPTIGKLSS 715
Query: 742 LHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAKMAQMVCSLTNRE 801
++ +AW +GLKT YYLRS A I +V + P A + CSL N E
Sbjct: 716 MYAYAWKQGLKT-TYYLRS-RPATRIARAARAAVPVQQP-------ADPQAVACSLENPE 766
Query: 802 ECMAC 806
C AC
Sbjct: 767 SCEAC 771
>gi|291437352|ref|ZP_06576742.1| class Ia ribonucleotide-diphosphate reductase large subunit chain
[Streptomyces ghanaensis ATCC 14672]
gi|291340247|gb|EFE67203.1| class Ia ribonucleotide-diphosphate reductase large subunit chain
[Streptomyces ghanaensis ATCC 14672]
Length = 793
Score = 570 bits (1469), Expect = e-159, Method: Compositional matrix adjust.
Identities = 313/793 (39%), Positives = 451/793 (56%), Gaps = 53/793 (6%)
Query: 31 IEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNT 90
+ DP V+ G ++L ELA E AA + + P Y+ LAAR++ +
Sbjct: 36 LPDADPGRVAAAALRGRSARADETELRELATEAAAGLISEDPAYSRLAARLLAIGIRAEA 95
Query: 91 KK----SFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYF 146
SF+ ++ +G + LIAD + +A RLD+ I D + YF
Sbjct: 96 ASQGVTSFTGSVA---------TGHREGLIADRTAAFVRLHADRLDALIDTGADDRFGYF 146
Query: 147 GFKTLERSYLLK--VQGKVVERPQHMLMRVAVGIHKDD----IDSAIKTYHMMSQRWFTH 200
G +TL YLL+ + KVVE PQH L+RVA G+ +DD +D Y +MS+ +
Sbjct: 147 GLRTLHSRYLLRHPITRKVVETPQHFLLRVAAGLAEDDSVRSVDEVAALYGLMSRLDYLP 206
Query: 201 ASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGS 260
+SPTLFN+GT Q+SSC+L+ D ++ IYD + A +SK AGGIG+S IR+ GS
Sbjct: 207 SSPTLFNSGTRHPQMSSCYLLDSPKDELDSIYDRYHQVARLSKHAGGIGLSYSRIRSRGS 266
Query: 261 YIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGK 320
IRGTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WH+DI EFL+LR N G+
Sbjct: 267 LIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTGE 325
Query: 321 EEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKA 380
+ R +L A WVPD FM RV ++G WSLF P + P L D WG EF+ +Y E++G A
Sbjct: 326 DARRTHNLNLAHWVPDEFMRRVDADGPWSLFSPADVPELVDLWGEEFDAVYRAAEEKGLA 385
Query: 381 KKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG--TIKSSNLCTEVIQYTSP 438
+K + A+ L+ ++++ +TG +M FKD N+ +NQ I SSNLCTE+++ T
Sbjct: 386 RKTLPARELYGRMMRTLAQTGNGWMTFKDAANRTANQTATPGHVIHSSNLCTEILEVTDD 445
Query: 439 TETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNK 498
ETAVCNL S+ L +V + D+E+L L++
Sbjct: 446 GETAVCNLGSVNLGAFV------------------DTAAGDIDWERLDRTVRTAVTFLDR 487
Query: 499 IIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHA 558
++D+N+YP E A RSN R RP+G+G GL D F L +PFDS EA+ L+ I E I A
Sbjct: 488 VVDINFYPTEQAGRSNARWRPVGLGAMGLQDVFFKLRLPFDSPEARTLSTRIAERIMLAA 547
Query: 559 LRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLV 618
S+++A +GP + + ++G+L PD + V+ + W LR I+ G+RNSLL+
Sbjct: 548 YEASADLAEDKGPLPAWEKTRTARGVLHPDHYDVDLTWPERWVALRGRIASTGLRNSLLL 607
Query: 619 APMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKI 678
A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ DL +G+W + +
Sbjct: 608 AIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVSDLKRLGVWDERTREAL 667
Query: 679 IYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGK 738
GSVQ IP++++ +Y+T WEI Q++L+D A R ++D +QSLN+ M+ P GK
Sbjct: 668 REAGGSVQGFAWIPDDVRRLYRTAWEIPQRSLIDTAAARTPFLDQAQSLNLFMETPTIGK 727
Query: 739 LTSLHFHAWLRGLKTGMYYLRSRAAA-----DAIKFTVDTSVLKENPKVTDDDDAKMAQM 793
L+S++ +AW +GLKT YYLRSR A + T+V + P T D+ +
Sbjct: 728 LSSMYAYAWKQGLKT-TYYLRSRPATRIARAAQAQPQAQTTVPVQQP--TPDE-----AV 779
Query: 794 VCSLTNREECMAC 806
CSL N E C AC
Sbjct: 780 ACSLENPESCEAC 792
>gi|302521844|ref|ZP_07274186.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
sp. SPB78]
gi|302430739|gb|EFL02555.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
sp. SPB78]
Length = 790
Score = 570 bits (1468), Expect = e-159, Method: Compositional matrix adjust.
Identities = 315/801 (39%), Positives = 453/801 (56%), Gaps = 45/801 (5%)
Query: 19 TARLKKLS-YGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASL 77
TA L+ L+ + DP V+ G ++L ELA E AA + + P Y+ L
Sbjct: 21 TALLRTLTELTADLPDTDPGRVAAAALRGRSAHADEAELRELATEAAAGLISEDPAYSRL 80
Query: 78 AARI----VVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDS 133
AAR+ +V F+ ++ G + LI D + + +AARLD+
Sbjct: 81 AARLLALAIVEEAAGQGASGFAASVA---------VGHREGLIGDRTAEFVAAHAARLDA 131
Query: 134 EIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRVAVGIHKDD----IDSAI 187
I D + YFG +TL YLL+ + KVVE PQ+ L+RVA G+ DD +D
Sbjct: 132 LIDTGGDDRFGYFGLRTLYSRYLLRHPITRKVVETPQYFLLRVAAGLAADDSLPAVDEVA 191
Query: 188 KTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGG 247
Y +MS+ + +SPTLFN+GT Q+SSC+L+ D ++ IY+ + A +SK AGG
Sbjct: 192 SLYRLMSRLDYLPSSPTLFNSGTRHPQMSSCYLLDSPKDELDSIYERYLQVARLSKHAGG 251
Query: 248 IGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHAD 307
IG++ IR+ GS IRGTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WH+D
Sbjct: 252 IGIAYSRIRSRGSLIRGTNGHSNGIVPFLKTLDSSVAAVNQGG-RRKGAAAVYLETWHSD 310
Query: 308 IFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEF 367
I EFL+LR N G+++ R L A W+PD FM RV ++ WSLF P + P L D WG EF
Sbjct: 311 IEEFLELRDNTGEDQRRTHHLNLAHWIPDEFMRRVAADAEWSLFSPADVPELTDLWGEEF 370
Query: 368 ERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQ--QNLGTIKS 425
E Y E +G A+K + A+ L+ ++++ +TG +M FKD N+ +NQ + + S
Sbjct: 371 EAAYRAAEAKGLARKTIPARELYGRMMRTLAQTGQGWMTFKDHSNRTANQTAEPGSVVHS 430
Query: 426 SNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKL 485
SNLCTE+I+ T ETAVCNL SI L +V N D+E+L
Sbjct: 431 SNLCTEIIEVTDDGETAVCNLGSINLGAFV--------------------DNGTIDWERL 470
Query: 486 AEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQ 545
E L++++D+N+YP + A SN R RP+G+G GL D F L +PFDS EA+
Sbjct: 471 DETVRTAVTFLDRVVDINFYPTDEAANSNARWRPVGLGAMGLQDVFFKLRLPFDSAEAKA 530
Query: 546 LNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRD 605
++ I E I A S+++A + GP + + ++G+L PD + V + W LR
Sbjct: 531 VSTRIAERIMLAAYEASADLAEKHGPVPAWEKTRTARGVLHPDHYDVERTWPERWEALRA 590
Query: 606 MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLT 665
I+++G+RNSLL+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ DL
Sbjct: 591 RIARSGMRNSLLLAIAPTATIASIAGVYECVEPQVSNLFKRETLSGEFLQVNGYLVEDLK 650
Query: 666 EMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQ 725
++G+W + + +GSVQ IPEE++A+Y+T WE+ Q+ L+DMA +R ++D SQ
Sbjct: 651 KLGVWDARTREALREANGSVQGFNWIPEEVRALYRTAWELPQRGLIDMAAERTAFLDQSQ 710
Query: 726 SLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDD 785
SLN+ M+ P GKL+S++ HAW +GLKT YYLRSR A I + + P
Sbjct: 711 SLNLFMETPTIGKLSSMYAHAWNKGLKT-TYYLRSRPATR-IARAAGSPAAEAAPIPVQQ 768
Query: 786 DDAKMAQMVCSLTNREECMAC 806
+ CSL N E C AC
Sbjct: 769 SVPDAEAIACSLENPESCEAC 789
>gi|318060205|ref|ZP_07978928.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
sp. SA3_actG]
gi|318077112|ref|ZP_07984444.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
sp. SA3_actF]
Length = 767
Score = 569 bits (1466), Expect = e-159, Method: Compositional matrix adjust.
Identities = 311/784 (39%), Positives = 446/784 (56%), Gaps = 44/784 (5%)
Query: 35 DPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARI----VVSNLHKNT 90
DP V+ G ++L ELA E AA + + P Y+ LAAR+ +V
Sbjct: 15 DPGRVAAAALRGRSAHADEAELRELATEAAAGLISEDPAYSRLAARLLALAIVEEAAGQG 74
Query: 91 KKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKT 150
F+ ++ G + LI D + + +AARLD+ I D + YFG +T
Sbjct: 75 ASGFAASVA---------VGHREGLIGDRTAEFVAAHAARLDALIDTGGDDRFGYFGLRT 125
Query: 151 LERSYLLK--VQGKVVERPQHMLMRVAVGIHKDD----IDSAIKTYHMMSQRWFTHASPT 204
L YLL+ + KVVE PQ+ L+RVA G+ DD +D Y +MS+ + +SPT
Sbjct: 126 LYSRYLLRHPITRKVVETPQYFLLRVAAGLAADDSLPAVDEVASLYRLMSRLDYLPSSPT 185
Query: 205 LFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRG 264
LFN+GT Q+SSC+L+ D ++ IY+ + A +SK AGGIG++ IR+ GS IRG
Sbjct: 186 LFNSGTRHPQMSSCYLLDSPKDELDSIYERYLQVARLSKHAGGIGIAYSRIRSRGSLIRG 245
Query: 265 TNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHR 324
TNG SNGIVP L+ + + V+QGG +RKGA AVYLE WH+DI EFL+LR N G+++ R
Sbjct: 246 TNGHSNGIVPFLKTLDSSVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTGEDQRR 304
Query: 325 ARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVV 384
L A W+PD FM RV ++ WSLF P + P L D WG EFE Y E +G A+K +
Sbjct: 305 THHLNLAHWIPDEFMRRVAADAEWSLFSPADVPELTDLWGEEFEAAYRAAEAKGLARKTI 364
Query: 385 QAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQ--QNLGTIKSSNLCTEVIQYTSPTETA 442
A+ L+ ++++ +TG +M FKD N+ +NQ + + SSNLCTE+I+ T ETA
Sbjct: 365 PARELYGRMMRTLAQTGQGWMTFKDHSNRTANQTAEPGSVVHSSNLCTEIIEVTDDGETA 424
Query: 443 VCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDV 502
VCNL SI L +V N D+E+L E L++++D+
Sbjct: 425 VCNLGSINLGAFV--------------------DNGTIDWERLDETVRTAVTFLDRVVDI 464
Query: 503 NYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTS 562
N+YP + A SN R RP+G+G GL D F L +PFDS EA+ ++ I E I A S
Sbjct: 465 NFYPTDEAANSNARWRPVGLGAMGLQDVFFKLRLPFDSAEAKAVSTRIAERIMLAAYEAS 524
Query: 563 SEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMP 622
+++A + GP + + ++G+L PD + V + W LR I+++G+RNSLL+A P
Sbjct: 525 ADLAEKHGPVPAWEKTRTARGVLHPDHYDVERTWPERWEALRARIARSGMRNSLLLAIAP 584
Query: 623 TASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDD 682
TA+ + I G EC EP SN++ R LSGEF+ VN +L+ DL ++G+W + + +
Sbjct: 585 TATIASIAGVYECVEPQVSNLFKRETLSGEFLQVNGYLVEDLKKLGVWDARTREALREAN 644
Query: 683 GSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSL 742
GSVQ IPEE++A+Y+T WE+ Q+ L+DMA +R ++D SQSLN+ M+ P GKL+S+
Sbjct: 645 GSVQGFNWIPEEVRALYRTAWELPQRGLIDMAAERTAFLDQSQSLNLFMETPTIGKLSSM 704
Query: 743 HFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAKMAQMVCSLTNREE 802
+ HAW +GLKT YYLRSR A I + + P + CSL N E
Sbjct: 705 YAHAWNKGLKT-TYYLRSRPATR-IARAAGSPAAEAAPIPVQQSVPDAEAIACSLENPES 762
Query: 803 CMAC 806
C AC
Sbjct: 763 CEAC 766
>gi|453055153|gb|EMF02600.1| ribonucleoside-diphosphate reductase subunit alpha [Streptomyces
mobaraensis NBRC 13819 = DSM 40847]
Length = 805
Score = 568 bits (1465), Expect = e-159, Method: Compositional matrix adjust.
Identities = 318/815 (39%), Positives = 465/815 (57%), Gaps = 63/815 (7%)
Query: 19 TARLKKLS-YGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASL 77
TA L+ L+ + DP V+ G + G ++L LA E AA + + P+Y+ L
Sbjct: 26 TALLRTLTELTADLPATDPGKVAAAALRGRHPGSDEAELRSLATEAAAGLISEEPEYSRL 85
Query: 78 AARIVVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDS 133
AAR++ + + SFS ++ +G + LIADD + ++A RLD+
Sbjct: 86 AARLLTLAIAEEAAGQGAVSFSASVA---------TGHREGLIADDTAAFVREHAERLDA 136
Query: 134 EIIYDRDFD----YDYFGFKTLERSYLLK--VQGKVVERPQHMLMRVAVGIHKDD----I 183
+ + YFG +TL YLL+ + V+E PQH L+RVA G+ +D +
Sbjct: 137 LVDAALADGADDRFGYFGLRTLHSRYLLRHPITRNVIETPQHFLLRVACGLAEDHSVRAL 196
Query: 184 DSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISK 243
+ + Y + S + +SPTLFN+GT Q+SSC+L+ D ++ IYD + A +SK
Sbjct: 197 EDVAELYRLTSTLSYLPSSPTLFNSGTRHPQMSSCYLLDSPLDELDSIYDRYHQVARLSK 256
Query: 244 SAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEP 303
AGGIG+S IR+ GS IRGTNG SNGIVP LR + + V+QGG +RKGA VYLE
Sbjct: 257 HAGGIGLSYSRIRSRGSLIRGTNGHSNGIVPFLRTLDASVAAVNQGG-RRKGAACVYLET 315
Query: 304 WHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCW 363
WHADI EFL+LR N G+E R +L A W+PD FM RV+++ WSLF P + P L D +
Sbjct: 316 WHADIEEFLELRDNTGEEARRTHNLNIAHWIPDEFMRRVEADADWSLFSPADTPDLVDLY 375
Query: 364 GTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQ--QNLG 421
G EF+ Y +YE EGKA K + A+ L+ ++++ +TG +M FKD N+ +NQ +
Sbjct: 376 GDEFDAAYRRYEAEGKAVKTIPARVLYARMMRTLAQTGNGWMTFKDAANRTANQTAEPGQ 435
Query: 422 TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFD 481
+ SSNLCTE+++ T+ ETAVCNL S+ L ++ G+ G D
Sbjct: 436 VVHSSNLCTEILEVTNDGETAVCNLGSVNLAAHL---------------GADGE----MD 476
Query: 482 FEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDST 541
+EKL L++++D+N+YP E A SN R RP+G+G+ GL D F L +PFDS
Sbjct: 477 WEKLDRTVRTAVTFLDRVVDINFYPTEQAGSSNSRWRPVGLGLMGLQDVFFRLRLPFDSP 536
Query: 542 EAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMW-GVNPS--DRW 598
EA+ L+ I E I A S+++A R GP+ + + ++G+L PD + P+ +RW
Sbjct: 537 EAKALSTRISERIMLAAYEASADLAERHGPHPAWSATRTARGVLHPDHYPNTEPTWAERW 596
Query: 599 DWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNK 658
D LR I+ G+RNSLL+A PTA+ + I G EC EP SN++ R LSGEF+ VN
Sbjct: 597 D--ALRARIASVGMRNSLLLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNT 654
Query: 659 HLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRG 718
+L+ DL ++G+W ++ + +GS+Q + IP+E++ +Y+T WEI Q+ L+DMA R
Sbjct: 655 YLVEDLKKLGVWDRATRDAMTDANGSIQDMAWIPQEVRDLYRTAWEIPQRALIDMAAART 714
Query: 719 CYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKE 778
Y+D SQSLN+ M P GKL+S++ +AW +G+KT YYLRSR A + +
Sbjct: 715 PYLDQSQSLNLFMASPTIGKLSSMYAYAWKQGIKT-TYYLRSRPATRIARAASGGAAASS 773
Query: 779 NPKVT-------DDDDAKMAQMVCSLTNREECMAC 806
+ T D DA + CSL N E C AC
Sbjct: 774 SAPATVPVQQAAPDADA----IACSLENPESCEAC 804
>gi|38344004|emb|CAC17631.2| class I ribonucleotide-diphosphate reductase large chain
[Streptomyces microflavus]
Length = 793
Score = 568 bits (1464), Expect = e-159, Method: Compositional matrix adjust.
Identities = 310/784 (39%), Positives = 447/784 (57%), Gaps = 46/784 (5%)
Query: 35 DPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKK-- 92
DP V+ G + G T++L ELA E AA + P Y+ LAAR++ + +
Sbjct: 43 DPGRVAAAALRGRHPGSDTAELRELATEAAAGLIAEDPAYSRLAARLLTLTIAEEAAGQG 102
Query: 93 --SFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKT 150
SFSE++ +G + LIA+ + +A RLDS I D + YFG +T
Sbjct: 103 AVSFSESVA---------TGHREGLIAERTAEFAALHADRLDSAIDPAGDDRFGYFGLRT 153
Query: 151 LERSYLLK--VQGKVVERPQHMLMRVAVGIHKDD----IDSAIKTYHMMSQRWFTHASPT 204
L YLL+ + KV+E PQH ++ VA G+ +DD +D Y +MS+ + +SPT
Sbjct: 154 LYSRYLLRHPITRKVIETPQHFMLGVAAGLAEDDSVRALDEVTALYGLMSRLDYLPSSPT 213
Query: 205 LFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRG 264
LFN+GT Q+SSC+L+ D ++ IYD + A +SK AGGIG++ IRA GS IRG
Sbjct: 214 LFNSGTRHPQMSSCYLLDSPKDELDSIYDRYHQVARLSKHAGGIGLAYSRIRARGSLIRG 273
Query: 265 TNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHR 324
TNG SNGIVP L+ + + V+QGG +RKGA AVYLE WHADI EFL+LR N G++ R
Sbjct: 274 TNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHADIEEFLELRDNTGEDARR 332
Query: 325 ARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVV 384
+L A W+PD FM RV ++ WSLF P + P L D +G EF+ Y E +G A+K +
Sbjct: 333 THNLNLAHWIPDEFMRRVNADADWSLFSPADVPELVDLYGAEFDAAYVAAEAKGLARKTM 392
Query: 385 QAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQ--QNLGTIKSSNLCTEVIQYTSPTETA 442
A+ L+ ++++ +TG +M FKD N+ +NQ + + SSNLCTE+I+ T ETA
Sbjct: 393 PARELYGRMMRTLAQTGNGWMTFKDASNRTANQTAEPGSVVHSSNLCTEIIEVTDDGETA 452
Query: 443 VCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDV 502
VCNL S+ L +V + + D+E+L L++++D+
Sbjct: 453 VCNLGSVKLGAFV------------------DTASGELDWERLDATVRTAVTFLDRVVDI 494
Query: 503 NYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTS 562
N+YP E A RSN R RP+G+G GL D F L +PFDS EA+ L+ I E I A S
Sbjct: 495 NFYPTEQAGRSNSRWRPVGLGAMGLQDVFFQLKLPFDSAEARALSTRISERIMLAAYEAS 554
Query: 563 SEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMP 622
+++A R GP + + ++G+L D + V + W LR I++ G+RNSLL+A P
Sbjct: 555 ADLAERNGPLPAWDKTRTARGVLHHDHYDVELTWPERWAALRARIAEVGMRNSLLLAIAP 614
Query: 623 TASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDD 682
TA+ + I G EC EP SN++ R LSGEF+ VN +L+ +L +G+W + +
Sbjct: 615 TATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNAYLVDELKRLGVWDAETREALRESS 674
Query: 683 GSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSL 742
GSVQ +P E +A+Y+T WEI Q+ L+DMA R ++D +QSLN+ M+ P GKL+S+
Sbjct: 675 GSVQDFAWVPAETRALYRTAWEIPQRGLIDMAAARTPFLDQAQSLNLFMETPTIGKLSSM 734
Query: 743 HFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAKMAQMVCSLTNREE 802
+ +AW +GLKT YYLRSR A + + + + D D + CSL N E
Sbjct: 735 YAYAWKQGLKT-TYYLRSRPATRIARAARAAAPVPAQSQAPDAD-----AIACSLENPES 788
Query: 803 CMAC 806
C AC
Sbjct: 789 CEAC 792
>gi|357401661|ref|YP_004913586.1| Ribonucleoside-diphosphate reductase large subunit [Streptomyces
cattleya NRRL 8057 = DSM 46488]
gi|386357724|ref|YP_006055970.1| ribonucleoside-diphosphate reductase large subunit [Streptomyces
cattleya NRRL 8057 = DSM 46488]
gi|337768070|emb|CCB76783.1| Ribonucleoside-diphosphate reductase large subunit [Streptomyces
cattleya NRRL 8057 = DSM 46488]
gi|365808232|gb|AEW96448.1| putative ribonucleoside-diphosphate reductase large subunit
[Streptomyces cattleya NRRL 8057 = DSM 46488]
Length = 788
Score = 567 bits (1460), Expect = e-158, Method: Compositional matrix adjust.
Identities = 314/784 (40%), Positives = 448/784 (57%), Gaps = 46/784 (5%)
Query: 35 DPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTK--- 91
DP V+ G + G ++L +LA E AA + + P Y+ LAAR++ + +
Sbjct: 38 DPGRVAAAALRGRHAGSDAAELRDLATEAAAGLISEDPQYSFLAARLLARAITEEAAGQQ 97
Query: 92 -KSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKT 150
SFS +I +G + LIAD +A RLD+ I D + YFG +T
Sbjct: 98 VTSFSSSIA---------TGHREGLIADATAAFTAAHAGRLDALIDPAGDDRFGYFGLRT 148
Query: 151 LERSYLLK--VQGKVVERPQHMLMRVAVGIHKDDIDSAIKT----YHMMSQRWFTHASPT 204
L YLL+ V +VVE PQH L+RVA G+ DD +A++ Y +MS+ + +SPT
Sbjct: 149 LYSRYLLRHPVTRQVVETPQHFLLRVACGLAADDSAAAVEEVASLYRLMSRLDYLPSSPT 208
Query: 205 LFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRG 264
LFN+GT Q+SSC+L+ D ++ IY + A +SK AGGIG+ IR+ GS IRG
Sbjct: 209 LFNSGTRHPQMSSCYLLDSPLDELDSIYQRYHQVARLSKHAGGIGLPFSRIRSRGSLIRG 268
Query: 265 TNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHR 324
TNG SNGIVP LR + + V+QGG +RKGA VYLE WHAD+ EFL+LR N G++ R
Sbjct: 269 TNGRSNGIVPFLRTLDASVAAVNQGG-RRKGAACVYLETWHADVEEFLELRDNTGEDARR 327
Query: 325 ARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVV 384
+L A W+PD FM RV+++ WSLF P + P L D WG EF+ Y E G+ K V
Sbjct: 328 THNLNLAHWIPDEFMRRVEADAEWSLFSPADVPELVDLWGEEFDAAYRAAEAAGRQIKRV 387
Query: 385 QAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQ--QNLGTIKSSNLCTEVIQYTSPTETA 442
A+ L+ ++++ +TG +M FKD N+ +NQ + + SSNLCTE+++ T ETA
Sbjct: 388 PARQLYARMMRTLAQTGNGWMTFKDAANRTANQTAEPGSVVHSSNLCTEILEVTDDGETA 447
Query: 443 VCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDV 502
VCNL S+ L ++ + + D+EKL L++++D+
Sbjct: 448 VCNLGSVNLAAHL-------------------TADASVDWEKLDATVRTAVTFLDRVVDI 488
Query: 503 NYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTS 562
NYYP E A SN R RP+G+GV GL D F L +PFDS EA+ L+ I E + A S
Sbjct: 489 NYYPTEQAAASNSRWRPVGLGVMGLQDVFFRLRLPFDSPEARALSTRIAERVMLAAYEQS 548
Query: 563 SEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMP 622
+A R GP+ + + ++G+L PD + P+ W LR+ IS+ G+RNSLL+A P
Sbjct: 549 CALAERHGPHPAWERTRAARGVLHPDHFPTEPAWPDRWTALRERISRTGLRNSLLLAIAP 608
Query: 623 TASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDD 682
TA+ + I G EC EP SN++ R LSGEF+ VN +L+ DL ++G+W + + +
Sbjct: 609 TATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNTYLVADLKKLGVWDARTREALREAN 668
Query: 683 GSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSL 742
GSVQ + IP ++A+Y+T WE+ Q+ L+DMA DR Y+D SQSLN+ M P GKL+S+
Sbjct: 669 GSVQDLGWIPAGVRALYRTAWELPQRALIDMAADRTPYLDQSQSLNLFMAAPTIGKLSSM 728
Query: 743 HFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAKMAQMVCSLTNREE 802
+ +AW +GLKT YYLRSR A + + P+ D +A + CSL N E
Sbjct: 729 YAYAWKKGLKT-TYYLRSRPATRIARAAGAATATAAVPQQAPDAEA----IACSLENPES 783
Query: 803 CMAC 806
C AC
Sbjct: 784 CEAC 787
>gi|333024514|ref|ZP_08452578.1| putative ribonucleoside-diphosphate reductase, alpha subunit
[Streptomyces sp. Tu6071]
gi|332744366|gb|EGJ74807.1| putative ribonucleoside-diphosphate reductase, alpha subunit
[Streptomyces sp. Tu6071]
Length = 790
Score = 567 bits (1460), Expect = e-158, Method: Compositional matrix adjust.
Identities = 315/802 (39%), Positives = 454/802 (56%), Gaps = 47/802 (5%)
Query: 19 TARLKKLS-YGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASL 77
TA L+ L+ + DP V+ G ++L ELA E AA + + P Y+ L
Sbjct: 21 TALLRTLTELTADLPDTDPGRVAAAALRGRSAHADEAELRELATEAAAGLISEDPAYSRL 80
Query: 78 AARI----VVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDS 133
AAR+ +V F+ ++ G + LI D + + +AARLD+
Sbjct: 81 AARLLALAIVEEAAGQGASGFAASVA---------VGHREGLIGDRTAEFVAAHAARLDA 131
Query: 134 EIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRVAVGIHKDD----IDSAI 187
+ D + YFG +TL YLL+ + KVVE PQ+ L+RVA G+ DD +D
Sbjct: 132 LVDTGGDDRFGYFGLRTLYSRYLLRHPITRKVVETPQYFLLRVAAGLAADDSLPAVDEVA 191
Query: 188 KTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGG 247
Y +MS+ + +SPTLFN+GT Q+SSC+L+ D ++ IY+ + A +SK AGG
Sbjct: 192 SLYRLMSRLDYLPSSPTLFNSGTRHPQMSSCYLLDSPKDELDSIYERYLQVARLSKHAGG 251
Query: 248 IGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHAD 307
IG++ IR+ GS IRGTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WH+D
Sbjct: 252 IGIAYSRIRSRGSLIRGTNGHSNGIVPFLKTLDSSVAAVNQGG-RRKGAAAVYLETWHSD 310
Query: 308 IFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEF 367
I EFL+LR N G+++ R L A W+PD FM RV ++ WSLF P + P L D WG EF
Sbjct: 311 IEEFLELRDNTGEDQRRTHHLNLAHWIPDEFMRRVAADAEWSLFSPADVPELTDLWGEEF 370
Query: 368 ERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQ--QNLGTIKS 425
E Y E +G A+K + A+ L+ ++++ +TG +M FKD N+ +NQ + + S
Sbjct: 371 EAAYRAAEAKGLARKTIPARELYGRMMRTLAQTGQGWMTFKDHSNRTANQTAEPGSVVHS 430
Query: 426 SNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKL 485
SNLCTE+I+ T ETAVCNL SI L +V N D+E+L
Sbjct: 431 SNLCTEIIEVTDDGETAVCNLGSINLGAFV--------------------DNGTIDWERL 470
Query: 486 AEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQ 545
E L++++D+N+YP + A SN R RP+G+G GL D F L +PFDS EA+
Sbjct: 471 DETVRTAVTFLDRVVDINFYPTDEAANSNARWRPVGLGAMGLQDVFFKLRLPFDSAEAKA 530
Query: 546 LNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRD 605
++ I E I A S ++A + GP + + ++G+L PD + V + W LR
Sbjct: 531 VSTRIAERIMLAAYEASVDLAEKHGPVPAWEKTRTARGVLHPDHYDVERTWPERWEALRA 590
Query: 606 MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLT 665
I+++G+RNSLL+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ DL
Sbjct: 591 RIARSGMRNSLLLAIAPTATIASIAGVYECVEPQVSNLFKRETLSGEFLQVNGYLVEDLK 650
Query: 666 EMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQ 725
++G+W + + +GSVQ IPEE++A+Y+T WE+ Q+ L+DMA +R ++D SQ
Sbjct: 651 KLGVWDARTREALREANGSVQGFNWIPEEVRALYRTAWELPQRGLIDMAAERTAFLDQSQ 710
Query: 726 SLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDD 785
SLN+ M+ P GKL+S++ HAW +GLKT YYLRSR A + + V
Sbjct: 711 SLNLFMETPTIGKLSSMYAHAWNKGLKT-TYYLRSRPATRIARAAGAPAAEAAPIPVQQS 769
Query: 786 -DDAKMAQMVCSLTNREECMAC 806
DA+ + CSL N E C AC
Sbjct: 770 VPDAEA--IACSLENPESCEAC 789
>gi|302536806|ref|ZP_07289148.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
sp. C]
gi|302445701|gb|EFL17517.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
sp. C]
Length = 798
Score = 566 bits (1459), Expect = e-158, Method: Compositional matrix adjust.
Identities = 314/791 (39%), Positives = 451/791 (57%), Gaps = 52/791 (6%)
Query: 35 DPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARI----VVSNLHKNT 90
DP V+ G ++L LA E AA + + P Y+ LAAR+ V
Sbjct: 40 DPGRVAAAALRGRSASADEAELRGLATEAAAGLISEDPAYSRLAARLLTLAVADEAAGQG 99
Query: 91 KKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIY----DRDFDYDYF 146
SF+E++ G + LIAD + + +AARLD+ + + D + +F
Sbjct: 100 ATSFAESVA---------VGHREGLIADRTAEFVAAHAARLDALVEHALAEGADDRFGFF 150
Query: 147 GFKTLERSYLLK--VQGKVVERPQHMLMRVAVGIHKDD----IDSAIKTYHMMSQRWFTH 200
G +TL YLL+ + +V+E PQ+ ++RVA G+ +DD ++ Y +MS+ +
Sbjct: 151 GLRTLHSRYLLRHPITRQVIETPQYFMLRVACGLAEDDSVQAVEEVASLYRLMSRLDYLP 210
Query: 201 ASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGS 260
+SPTLFN+GT Q+SSC+L+ D ++ IYD + A +SK AGGIG+S IRA GS
Sbjct: 211 SSPTLFNSGTRHPQMSSCYLLDSPLDELDSIYDRYHQVARLSKHAGGIGLSYSRIRARGS 270
Query: 261 YIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGK 320
IRGTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WHADI EFL+LR N G+
Sbjct: 271 LIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHADIEEFLELRDNTGE 329
Query: 321 EEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKA 380
++ R +L A W+PD FM RV ++ WSLF P + P L D +G EF+ Y K E G A
Sbjct: 330 DQRRTHNLNLAHWIPDEFMRRVNADADWSLFSPADVPELVDLYGDEFDAAYVKAEAAGLA 389
Query: 381 KKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNL-GTI-KSSNLCTEVIQYTSP 438
KK + A++L+ ++++ +TG +M FKD N+ +NQ L GT+ SSNLCTE+I+ T+
Sbjct: 390 KKTMPARDLYGRMMRTLAQTGQGWMTFKDASNRTANQTALPGTVVHSSNLCTEIIEVTND 449
Query: 439 TETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNK 498
ETAVCNL S+ L +V + D+ +L E L++
Sbjct: 450 GETAVCNLGSVNLGAFV--------------------ADGEMDWARLDETVRTAVTFLDR 489
Query: 499 IIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHA 558
++D+N+YP E A RSN + RP+G+G GL D F L +PFDS EA+ L+ I E I A
Sbjct: 490 VVDINFYPTEQAGRSNAKWRPVGLGAMGLQDVFFKLRLPFDSAEAKALSTKISERIMLAA 549
Query: 559 LRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNP--SDRWDWGGLRDMISKNGVRNSL 616
S ++A R GP + + ++G+L PD + +RWD LR I+K G+RNSL
Sbjct: 550 YEASCDLAERSGPLPAWAETRTAQGVLHPDHYETERHWPERWD--ALRARIAKTGMRNSL 607
Query: 617 LVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKN 676
L+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ DL ++G+W +
Sbjct: 608 LLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNGYLVEDLKQLGVWDAQTRE 667
Query: 677 KIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNF 736
+ GSVQ IP E++ +Y+T WEI Q+ L+DMA R Y+D SQSLN+ ++ P
Sbjct: 668 ALRESSGSVQGFGWIPAEIRELYRTAWEIPQRGLIDMAAARTPYLDQSQSLNLFLETPTI 727
Query: 737 GKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAKMAQ-MVC 795
GKL+S++ +AW +GLKT YYLRSR A + + + A A+ + C
Sbjct: 728 GKLSSMYAYAWKQGLKT-TYYLRSRPATKIARAASGAAAVPAAATPAQLPQALDAEALAC 786
Query: 796 SLTNREECMAC 806
SL N E C AC
Sbjct: 787 SLENPESCEAC 797
>gi|254388986|ref|ZP_05004217.1| ribonucleotide-diphosphate reductase large chain [Streptomyces
clavuligerus ATCC 27064]
gi|294814922|ref|ZP_06773565.1| Ribonucleoside-diphosphate reductase [Streptomyces clavuligerus
ATCC 27064]
gi|326443294|ref|ZP_08218028.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
clavuligerus ATCC 27064]
gi|197702704|gb|EDY48516.1| ribonucleotide-diphosphate reductase large chain [Streptomyces
clavuligerus ATCC 27064]
gi|218078698|emb|CAB90707.4| class Ia ribonucleotide-diphosphate reductase large subunit chain
[Streptomyces clavuligerus ATCC 27064]
gi|294327521|gb|EFG09164.1| Ribonucleoside-diphosphate reductase [Streptomyces clavuligerus
ATCC 27064]
Length = 810
Score = 566 bits (1458), Expect = e-158, Method: Compositional matrix adjust.
Identities = 320/808 (39%), Positives = 457/808 (56%), Gaps = 60/808 (7%)
Query: 19 TARLKKLS-YGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASL 77
TA L+ L+ + DP V+ G + G ++L LA + AA + P Y+ L
Sbjct: 42 TALLRTLTDLTADLPDTDPGRVAAAALRGRHPGSDAAELRGLATDAAAGLIAEDPAYSRL 101
Query: 78 AARIVVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDS 133
AAR++ + + SFS ++ G LIAD + ++ARLD+
Sbjct: 102 AARLLTLTIGDEARSQGAVSFSASVA---------VGHTEGLIADRTAAFVALHSARLDA 152
Query: 134 EIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRVAVGIHKDD----IDSAI 187
I D D + YFG +TL YLL+ + KVVE PQH ++RVA G+ +DD +D
Sbjct: 153 LIDLDADDRFGYFGLRTLYSRYLLRHPITRKVVETPQHFMLRVACGLAEDDTERALDEVA 212
Query: 188 KTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGG 247
Y +MS+ + +SPTLFN+GT Q+SSC+L+ D ++ IY + A +SK AGG
Sbjct: 213 ALYRLMSRLDYLPSSPTLFNSGTRHPQMSSCYLLDSPQDELDSIYGRYHQVARLSKHAGG 272
Query: 248 IGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHAD 307
IG+S IR+ GS IRGTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WHAD
Sbjct: 273 IGLSYSRIRSRGSLIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHAD 331
Query: 308 IFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEF 367
I EFL+LR N G++ R +L A W+PD FM RVQ++ WSLF P + P L D WG EF
Sbjct: 332 IEEFLELRDNTGEDARRTHNLNLAHWIPDEFMRRVQADTEWSLFSPADVPELVDLWGDEF 391
Query: 368 ERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG--TIKS 425
+ Y K E G A++ + A+ L+ ++++ +TG +M FKD N+ +NQ L T+ S
Sbjct: 392 DAAYRKAEAAGLARRTLPARELYGRMMRTLAQTGNGWMTFKDASNRTANQTALPGHTVHS 451
Query: 426 SNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKL 485
SNLCTE+++ T ETAVCNL S+ L +V S G D+E+L
Sbjct: 452 SNLCTEILEVTDDGETAVCNLGSVNLGAFV----------------SGGD----IDWERL 491
Query: 486 AEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQ 545
L++++D+N+YP E A RSN + RP+G+G GL D F L +PFDS EA+
Sbjct: 492 DATVRTAVTFLDRVVDINFYPTEQAGRSNTKWRPVGLGAMGLQDVFFQLRLPFDSAEARA 551
Query: 546 LNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDRWDWGGLRD 605
L+ I E I A S+++A R GP + + ++G+L PD +GV W LR+
Sbjct: 552 LSTRIAERIMLAAYEASADLAERHGPLPAWEKTRTARGVLHPDHYGVEQHWPERWAALRE 611
Query: 606 MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLT 665
++ G+RNSLL+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ +L
Sbjct: 612 RVATTGMRNSLLLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNSYLVAELK 671
Query: 666 EMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQ 725
+G+W + + GS+Q +P+E++ +Y+T WEI Q+ L+DMA R YID SQ
Sbjct: 672 RLGVWDAQTREALRDASGSIQGFNWVPDEVRELYRTAWEIPQRGLIDMAAARTPYIDQSQ 731
Query: 726 SLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAA-------DAIKFTVDTSVLKE 778
SLN+ M+ P GKL+S++ +AW +GLKT YYLRSR A T +++
Sbjct: 732 SLNLFMETPTIGKLSSMYAYAWKQGLKT-TYYLRSRPATRIARAASGTAAAAPATVPVQQ 790
Query: 779 NPKVTDDDDAKMAQMVCSLTNREECMAC 806
P+ DA + CSL N E C AC
Sbjct: 791 VPQ-----DA----VACSLENPESCEAC 809
>gi|386839867|ref|YP_006244925.1| ribonucleoside-diphosphate reductase subunit alpha [Streptomyces
hygroscopicus subsp. jinggangensis 5008]
gi|374100168|gb|AEY89052.1| ribonucleoside-diphosphate reductase alpha chain [Streptomyces
hygroscopicus subsp. jinggangensis 5008]
gi|451793161|gb|AGF63210.1| ribonucleoside-diphosphate reductase alpha chain [Streptomyces
hygroscopicus subsp. jinggangensis TL01]
Length = 698
Score = 562 bits (1449), Expect = e-157, Method: Compositional matrix adjust.
Identities = 295/709 (41%), Positives = 422/709 (59%), Gaps = 39/709 (5%)
Query: 110 GLKAPLIADDVYDIIMKNAARLD----SEIIYDRDFDYDYFGFKTLERSYLLK--VQGKV 163
G + LIAD + + +A RLD S + D + YFG +TL YLL+ V KV
Sbjct: 16 GRREGLIADGTAEFVRTHAERLDALVESAVAEGADDRFGYFGLRTLYSRYLLRHPVTRKV 75
Query: 164 VERPQHMLMRVAVGIHKDD----IDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCF 219
+E PQH L+RVA G+ +DD +D Y +MS+ + +SPTLFN+GTP Q+S+C+
Sbjct: 76 IETPQHFLLRVASGLAEDDTSRSVDEVAALYGLMSRLDYLPSSPTLFNSGTPHPQMSACY 135
Query: 220 LVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVF 279
L+ D ++ IYD + A +SK AGGIG+S IR+ GS IRGTNG SNGIVP L+
Sbjct: 136 LLDSPLDELDSIYDRYHQVARLSKHAGGIGLSYSRIRSRGSLIRGTNGHSNGIVPFLKTL 195
Query: 280 NDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFM 339
+ + V+QGG +RKGA AVYLE WH+DI EFL+LR N G++ R +L A W+PD FM
Sbjct: 196 DASVAAVNQGG-RRKGAAAVYLETWHSDIEEFLELRDNTGEDARRTHNLNLAHWIPDEFM 254
Query: 340 ERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIE 399
RV ++ WSLF P + P L D WG +F+ Y K E G AKK + A++L+ ++++ +
Sbjct: 255 RRVNADEQWSLFSPADVPELVDLWGEDFDAAYRKAEAAGLAKKTIAARDLYGRMMRTLAQ 314
Query: 400 TGTPYMLFKDTCNKKSNQ--QNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVRE 457
TG +M FKD N+ +NQ + + SSNLCTE+++ T+ ETAVCNL S+ L +V
Sbjct: 315 TGNGWMTFKDAANRTANQTAEPGNVVHSSNLCTEILEVTNDGETAVCNLGSVNLGAFV-- 372
Query: 458 MGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRH 517
+ + D+E+L + L++++D+N+YP E A RSN +
Sbjct: 373 ----------------DAASGDIDWERLDQTVRTAVTFLDRVVDINFYPTEQAGRSNAKW 416
Query: 518 RPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHG 577
RP+G+G GL D F L +PFDS EA+ L+ I E I A TS+++A R GP +
Sbjct: 417 RPVGLGAMGLQDVFFKLRLPFDSAEAKALSTRIAERIMLAAYETSADLAERNGPLPAWDQ 476
Query: 578 SPVSKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFE 637
+ ++G+L PD + V + W LR+ ++ G+RN+L++A PT++ + I G EC E
Sbjct: 477 TRAARGVLHPDHYDVQFTWPERWAALRERVAAVGMRNALMLAIAPTSTIASIAGVYECIE 536
Query: 638 PYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKA 697
P SN++ R LSGEF+ VN +L+ DL +G+W + + +GS+Q P IPEE +A
Sbjct: 537 PQVSNLFKRETLSGEFLQVNSYLVQDLKNLGVWDARTREALRDSNGSIQDFPWIPEETRA 596
Query: 698 IYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYY 757
+Y+T WEI Q+ L+DMA R Y+D QSLN+ M+ P GKL+S++ +AW GLKT YY
Sbjct: 597 LYRTAWEIPQRGLIDMAAARTPYLDQGQSLNLFMETPTIGKLSSMYAYAWKSGLKT-TYY 655
Query: 758 LRSRAAADAIKFTVDTSVLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
LRSR A I +V + P D DA + CSL N E C AC
Sbjct: 656 LRSRPATR-IARAAQATVPAQQP--APDPDA----IACSLENPESCEAC 697
>gi|357411277|ref|YP_004923013.1| ribonucleoside-diphosphate reductase subunit alpha [Streptomyces
flavogriseus ATCC 33331]
gi|320008646|gb|ADW03496.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
flavogriseus ATCC 33331]
Length = 797
Score = 562 bits (1448), Expect = e-157, Method: Compositional matrix adjust.
Identities = 317/813 (38%), Positives = 463/813 (56%), Gaps = 65/813 (7%)
Query: 19 TARLKKLSYGLS--IEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYAS 76
TA L+ L+ GL+ + DP V+ G ++L LA E AA + + P Y+
Sbjct: 24 TALLRTLT-GLTADLPDTDPGRVAAAALRGRNARSDEAELRSLATEAAAGLISEDPSYSR 82
Query: 77 LAARIVVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLD 132
LAAR++ + SFS ++ G + LIAD + + +AA LD
Sbjct: 83 LAARLLTRAVADEAAGQGAVSFSASVA---------VGHREGLIADRTAEFVTLHAAALD 133
Query: 133 SEIIYDR------DFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRVAVGIHKDDID 184
+ + DR D + YFG +TL YLL+ + +V E PQH ++RVA G+ +D +
Sbjct: 134 A--LVDRALADGADDRFGYFGLRTLHSRYLLRHPLTRQVTETPQHFMLRVAAGLAEDTSE 191
Query: 185 SAIKT----YHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
A++ Y +M++ + +SPTLFN+GT Q+SSC+L+ D ++ IYD + A
Sbjct: 192 RALEEVAALYGLMNRLDYLPSSPTLFNSGTRHPQMSSCYLLDSPMDELDSIYDRYHQVAR 251
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
+SK AGGIG+S IRA GS IRGTNG SNGIVP L+ + + V+QGG +RKGA AVY
Sbjct: 252 LSKHAGGIGLSYSRIRARGSLIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVY 310
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LE WHADI EFL+LR N G+++ R +L A W+PD FM RV ++ WSLF P +AP L
Sbjct: 311 LETWHADIEEFLELRDNTGEDQRRTHNLNLAHWIPDEFMRRVDADTQWSLFSPADAPELV 370
Query: 361 DCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQ--Q 418
D WG EF+ Y E +G A++ + A+ L+ ++++ +TG +M FKD N+ +NQ +
Sbjct: 371 DLWGDEFDAAYRAAEAKGLARRTLPARELYGRMMRTLAQTGQGWMTFKDASNRTANQTAE 430
Query: 419 NLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNR 478
+ SSNLCTE+++ T ETAVCNL S+ L +V E +
Sbjct: 431 PGRVVHSSNLCTEILEVTDDGETAVCNLGSVNLGAFVAEGTI------------------ 472
Query: 479 YFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPF 538
D+E+L L++++D+N+YP E A RSN R RP+G+G GL D F L +PF
Sbjct: 473 --DWERLDATVRTAVTFLDRVVDINFYPTEQAGRSNARWRPVGLGAMGLQDVFFQLRLPF 530
Query: 539 DSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWG--VNPSD 596
DS EA+ L+ I E I A S ++A R GP + + ++G+L PD + ++ +
Sbjct: 531 DSPEARALSTKISERIMLAAYEASCDLAERSGPLPAWSETRAARGVLHPDHYDTELHWPE 590
Query: 597 RWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVV 656
RWD LR +++ G+RNSLL+A PTA+ + I G EC EP SN++ R LSGEF+ V
Sbjct: 591 RWD--ALRARVARTGMRNSLLLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQV 648
Query: 657 NKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVD 716
N +L+ +L ++G+W + + GSVQ IPE+++A+Y+T WEI Q+ L+DMA
Sbjct: 649 NAYLVDELKKLGVWDARTREALREASGSVQGFAWIPEDVRALYRTAWEIPQRGLIDMAAA 708
Query: 717 RGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
R ++D SQSLN+ ++ P GKL+S++ +AW +GLKT YYLRSR A + +
Sbjct: 709 RTPFLDQSQSLNLFLETPTIGKLSSMYAYAWKQGLKT-TYYLRSRPATRIARAASGQAPA 767
Query: 777 KENPKV---TDDDDAKMAQMVCSLTNREECMAC 806
V D DA + CSL N E C AC
Sbjct: 768 AATVPVQASAPDADA----LACSLENPESCEAC 796
>gi|345009209|ref|YP_004811563.1| ribonucleoside-diphosphate reductase subunit alpha [Streptomyces
violaceusniger Tu 4113]
gi|344035558|gb|AEM81283.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
violaceusniger Tu 4113]
Length = 804
Score = 561 bits (1445), Expect = e-157, Method: Compositional matrix adjust.
Identities = 319/827 (38%), Positives = 464/827 (56%), Gaps = 56/827 (6%)
Query: 4 VKRDGKQEAVHFDKITARLKKLSYGLS--IEHCDPVLVSQKVCTGVYKGVTTSQLDELAA 61
V +A H TA L+ L+ GL+ + DP V+ G + G ++L LA
Sbjct: 9 VSEQAVSQAAHDAPGTALLRTLT-GLTADLPATDPGKVAAAALRGRHPGSDEAELRGLAI 67
Query: 62 ETAAAMTTNHPDYASLAARIVVSNLHKNTKK----SFSETIKDMYNHYNERSGLKAPLIA 117
E AA + P+Y+ LAAR++ + + SFS +++ G + L+A
Sbjct: 68 EAAAGLIAEEPEYSRLAARLLALTITEEAAGQGAVSFSTSVQ---------VGHREGLLA 118
Query: 118 DDVYDIIMKNAARLDS----EIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHML 171
D + +AARLD+ + D + YFG +TL YLL+ + +V+E PQH L
Sbjct: 119 DSTAEFAAAHAARLDALVERALADGADKRFGYFGLRTLYSRYLLRHPITRQVIETPQHFL 178
Query: 172 MRVAVGIHKD----DIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDS 227
+RVA G+ +D +D + Y + S + +SPTLFN+GT Q+SSC+L+ D
Sbjct: 179 LRVACGLAEDLSERALDDVAELYRLTSTLSYLPSSPTLFNSGTRHPQMSSCYLLDSPLDE 238
Query: 228 IEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVD 287
++ IY+ + A +SK AGGIG+S IRA GS IRGTNG SNGIVP LR + + V+
Sbjct: 239 LDSIYNRYHQVARLSKHAGGIGLSYSRIRARGSLIRGTNGHSNGIVPFLRTLDASVAAVN 298
Query: 288 QGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGL 347
QGG +RKGA VYLE WHAD+ EFL+LR N G+E R +L A W+PD FM RV+++
Sbjct: 299 QGG-RRKGAACVYLETWHADLEEFLELRDNTGEEARRTHNLNIAHWIPDEFMRRVEADAD 357
Query: 348 WSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLF 407
WSLF P +AP L D WG EF+ Y K E EG+A K V A+ L+ ++++ +TG +M F
Sbjct: 358 WSLFSPVDAPALVDLWGDEFDAAYRKAEAEGRAVKQVPARQLYARMMRTLAQTGNGWMTF 417
Query: 408 KDTCNKKSNQ--QNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESH 465
KD N+ +NQ + + SSNLCTE+++ T+ ETAVCNL S+ L ++ E G
Sbjct: 418 KDAANRTANQTAEPGRVVHSSNLCTEILEVTNDGETAVCNLGSVNLAAHLDEDG------ 471
Query: 466 PSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQ 525
D+E+L L++++D+N+YP + A SN R RP+G+G+
Sbjct: 472 -------------QVDWERLDATVHTAVTFLDRVVDINFYPTDEAGASNSRWRPVGLGLM 518
Query: 526 GLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGIL 585
GL D F L +PFDS EA+ L+ I E I A S E+A R GP+ + + ++G+L
Sbjct: 519 GLQDVFFRLRLPFDSPEAKALSTRISERIMLAAYEASCELAERHGPHPAWSETRTARGVL 578
Query: 586 QPDMWGVNPSDRWD--WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNI 643
PD + + W W LR ++K+G+RNSLL+A PTA+ + I G EC EP SN+
Sbjct: 579 HPDHY-TDAVATWPERWEALRTRMAKSGMRNSLLLAIAPTATIASIAGVYECIEPQVSNL 637
Query: 644 YSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVW 703
+ R LSGEF+ VN +L+ DL ++G+W + + +GSVQ+ +P +++ +Y+T W
Sbjct: 638 FKRETLSGEFLQVNSYLVDDLKKLGVWDAHTREALRESNGSVQEFSWVPADVRDLYRTAW 697
Query: 704 EIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAA 763
EI Q+ L++MA R Y+D SQSLN+ M P GKL+S++ +AW RG+KT YYLRSR A
Sbjct: 698 EIPQRALIEMAAARTPYLDQSQSLNLFMASPTIGKLSSMYAYAWKRGIKT-TYYLRSRPA 756
Query: 764 A----DAIKFTVDTSVLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
A + A+ + CSL N E C AC
Sbjct: 757 TRIAQSARGGGAAATAPAPALIPVQQAPAEADAIACSLENPESCEAC 803
>gi|326776717|ref|ZP_08235982.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
griseus XylebKG-1]
gi|326657050|gb|EGE41896.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
griseus XylebKG-1]
Length = 804
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 311/807 (38%), Positives = 451/807 (55%), Gaps = 52/807 (6%)
Query: 19 TARLKKLS-YGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASL 77
TA L+ L+ + + DP V+ G ++L LA E AA + + P Y+ L
Sbjct: 30 TALLRTLTDLTVDLPDTDPGRVAAAALRGRNARSDEAELRSLATEAAAGLISEDPAYSRL 89
Query: 78 AARIVVSNLHKNTK----KSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLD- 132
AAR++ + SFS ++ G + LIAD + +A LD
Sbjct: 90 AARLLTRTIADEAAGQGATSFSASVA---------VGHREGLIADRTAAFVALHATALDQ 140
Query: 133 --SEIIYD-RDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRVAVGIHKDD----I 183
+ + D D + YFG +TL YLL+ + +V+E PQH ++RVA G+ +D+ +
Sbjct: 141 LVGQALTDGADDRFGYFGLRTLHSRYLLRHPITRQVIETPQHFMLRVAAGLAEDESVRAL 200
Query: 184 DSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISK 243
D Y +MS+ + +SPTLFN+GT Q+SSC+L+ D ++ IYD + A +SK
Sbjct: 201 DEVAALYGLMSKLDYLPSSPTLFNSGTRHPQMSSCYLLDSPKDELDSIYDRYHQVARLSK 260
Query: 244 SAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEP 303
AGGIG+S IRA GS IRGTNG SNGIVP L+ + + V+QGG +RKGA AVYLE
Sbjct: 261 HAGGIGLSYSRIRARGSLIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLET 319
Query: 304 WHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCW 363
WHADI EFL+LR N G+++ R +L A W+PD FM RV ++ WSLF P + P L D W
Sbjct: 320 WHADIEEFLELRDNTGEDQRRTHNLNLAHWIPDEFMRRVDADTEWSLFSPADVPELVDLW 379
Query: 364 GTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQ--QNLG 421
G F+ Y E +G A+K + A+ L+ ++++ +TG +M FKD N+ +NQ +
Sbjct: 380 GDAFDAAYRAAEAKGLARKTMPARELYGRMMRTLAQTGQGWMTFKDASNRTANQTAEPGR 439
Query: 422 TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFD 481
+ SSNLCTE+++ T ETAVCNL S+ L +V N D
Sbjct: 440 VVHSSNLCTEILEVTDDGETAVCNLGSVNLGAFV--------------------ANGSID 479
Query: 482 FEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDST 541
+++L L++++D+N+YP E A SN R RP+G+G GL D F L +PFDS
Sbjct: 480 WDRLDATVRTAVTFLDRVVDINFYPTEQAGNSNSRWRPVGLGAMGLQDVFFQLRLPFDSP 539
Query: 542 EAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWG--VNPSDRWD 599
EA+ L+ I E I A S ++A R GP + + ++G+L PD + +N DRWD
Sbjct: 540 EARALSTKISERIMLAAYEASCDLAERSGPLPAWSRTRAARGVLHPDHYATELNWPDRWD 599
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
LR ++K G+RNSLL+A PTA+ + I G EC EP SN++ R LSGEF+ VN +
Sbjct: 600 --ALRARVAKTGMRNSLLLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNAY 657
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
L+ +L ++G+W + + GSVQ IPE+++A+Y+T WEI Q+ L+DMA R
Sbjct: 658 LVDELKKLGVWDARTREALREASGSVQGFAWIPEDVRALYRTAWEIPQRGLIDMAAARTP 717
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN 779
++D SQSLN+ ++ P GKL+S++ +AW +GLKT YYLRSR A + +
Sbjct: 718 FLDQSQSLNLFLETPTIGKLSSMYAYAWKQGLKT-TYYLRSRPATRIARAASGQASAAAP 776
Query: 780 PKVTDDDDAKMAQMVCSLTNREECMAC 806
V + CSL N E C AC
Sbjct: 777 LPVQQASAPDADAIACSLENPESCEAC 803
>gi|182436092|ref|YP_001823811.1| ribonucleoside-diphosphate reductase large subunit [Streptomyces
griseus subsp. griseus NBRC 13350]
gi|178464608|dbj|BAG19128.1| putative ribonucleoside-diphosphate reductase large subunit
[Streptomyces griseus subsp. griseus NBRC 13350]
Length = 804
Score = 559 bits (1440), Expect = e-156, Method: Compositional matrix adjust.
Identities = 311/807 (38%), Positives = 451/807 (55%), Gaps = 52/807 (6%)
Query: 19 TARLKKLS-YGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASL 77
TA L+ L+ + + DP V+ G ++L LA E AA + + P Y+ L
Sbjct: 30 TALLRTLTDLTVDLPDTDPGRVAAAALRGRNARSDEAELRSLATEAAAGLISEDPAYSRL 89
Query: 78 AARIVVSNLHKNTK----KSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLD- 132
AAR++ + SFS ++ G + LIAD + +A LD
Sbjct: 90 AARLLTRTIADEAAGQGATSFSASVA---------VGHREGLIADRTAAFVALHATALDQ 140
Query: 133 --SEIIYD-RDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRVAVGIHKDD----I 183
+ + D D + YFG +TL YLL+ + +V+E PQH ++RVA G+ +D+ +
Sbjct: 141 LVGQALTDGADDRFGYFGLRTLHSRYLLRHPITRQVIETPQHFMLRVAAGLAEDESVRAL 200
Query: 184 DSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISK 243
D Y +MS+ + +SPTLFN+GT Q+SSC+L+ D ++ IYD + A +SK
Sbjct: 201 DEVAALYGLMSKLDYLPSSPTLFNSGTRHPQMSSCYLLDSPKDELDSIYDRYHQVARLSK 260
Query: 244 SAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEP 303
AGGIG+S IRA GS IRGTNG SNGIVP L+ + + V+QGG +RKGA AVYLE
Sbjct: 261 HAGGIGLSYSRIRARGSLIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLET 319
Query: 304 WHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCW 363
WHADI EFL+LR N G+++ R +L A W+PD FM RV ++ WSLF P + P L D W
Sbjct: 320 WHADIEEFLELRDNTGEDQRRTHNLNLAHWIPDEFMRRVDADTEWSLFSPADVPELVDLW 379
Query: 364 GTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQ--QNLG 421
G F+ Y E +G A+K + A+ L+ ++++ +TG +M FKD N+ +NQ +
Sbjct: 380 GDAFDAAYRAAEAKGLARKTMPARELYGRMMRTLAQTGQGWMTFKDASNRTANQTAEPGR 439
Query: 422 TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFD 481
+ SSNLCTE+++ T ETAVCNL S+ L +V N D
Sbjct: 440 VVHSSNLCTEILEVTDDGETAVCNLGSVNLGAFV--------------------ANGSID 479
Query: 482 FEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDST 541
+++L L++++D+N+YP E A SN R RP+G+G GL D F L +PFDS
Sbjct: 480 WDRLDSTVRTAVTFLDRVVDINFYPTEQAGNSNSRWRPVGLGAMGLQDVFFQLRLPFDSP 539
Query: 542 EAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWG--VNPSDRWD 599
EA+ L+ I E I A S ++A R GP + + ++G+L PD + +N DRWD
Sbjct: 540 EARALSTKISERIMLAAYEASCDLAERSGPLPAWSKTRAARGVLHPDHYATELNWPDRWD 599
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
LR ++K G+RNSLL+A PTA+ + I G EC EP SN++ R LSGEF+ VN +
Sbjct: 600 --ALRARVAKTGMRNSLLLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNAY 657
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
L+ +L ++G+W + + GSVQ IPE+++A+Y+T WEI Q+ L+DMA R
Sbjct: 658 LVDELKKLGVWDARTREALREASGSVQGFAWIPEDVRALYRTAWEIPQRGLIDMAAARTP 717
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN 779
++D SQSLN+ ++ P GKL+S++ +AW +GLKT YYLRSR A + +
Sbjct: 718 FLDQSQSLNLFLETPTIGKLSSMYAYAWKQGLKT-TYYLRSRPATRIARAASGQASAAAP 776
Query: 780 PKVTDDDDAKMAQMVCSLTNREECMAC 806
V + CSL N E C AC
Sbjct: 777 LPVQQASAPDADAIACSLENPESCEAC 803
>gi|411004497|ref|ZP_11380826.1| ribonucleoside-diphosphate reductase subunit alpha [Streptomyces
globisporus C-1027]
Length = 807
Score = 558 bits (1438), Expect = e-156, Method: Compositional matrix adjust.
Identities = 310/807 (38%), Positives = 452/807 (56%), Gaps = 52/807 (6%)
Query: 19 TARLKKLS-YGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASL 77
TA L+ L+ + + DP V+ G ++L LA E AA + + P Y+ L
Sbjct: 33 TALLRTLTDLTVDLPDTDPGRVAAAALRGRNARSDEAELRMLATEAAAGLISEDPAYSRL 92
Query: 78 AARIVVSNLHKNTK----KSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDS 133
AAR++ ++ SFS ++ G + LIAD + +A LD
Sbjct: 93 AARLLTLSIADEAAGQGATSFSASVT---------VGHREGLIADRTAAFVELHAKALDE 143
Query: 134 ----EIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRVAVGIHKDD----I 183
+ D + YFG +TL YLL+ + +V+E PQH ++RVA G+ +D+ +
Sbjct: 144 LVERTLAEGADDRFGYFGLRTLHSRYLLRHPITRQVIETPQHFMLRVAAGLAEDESARAL 203
Query: 184 DSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISK 243
D Y +MS+ + +SPTLFN+GT Q+SSC+L+ D ++ IYD + A +SK
Sbjct: 204 DEVAALYGLMSKLDYLPSSPTLFNSGTRHPQMSSCYLLDSPKDELDSIYDRYHQVARLSK 263
Query: 244 SAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEP 303
AGGIG+S IRA GS IRGTNG SNGIVP L+ + + V+QGG +RKGA AVYLE
Sbjct: 264 HAGGIGLSYSRIRARGSLIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLET 322
Query: 304 WHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCW 363
WHADI EFL+LR N G+++ R +L A W+PD FM RV ++ WSLF P + P L D W
Sbjct: 323 WHADIEEFLELRDNTGEDQRRTHNLNLAHWIPDEFMRRVDADTEWSLFSPADVPELVDLW 382
Query: 364 GTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQ--QNLG 421
G EF+ Y E +G A+K + A+ L+ ++++ +TG +M FKD N+ +NQ +
Sbjct: 383 GDEFDAAYRAAEAKGLARKTMPARELYGRMMRTLAQTGQGWMTFKDASNRTANQTAEPGR 442
Query: 422 TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFD 481
+ SSNLCTE+++ T+ ETAVCNL S+ L +V N D
Sbjct: 443 VVHSSNLCTEILEVTNDGETAVCNLGSVNLGAFV--------------------ANGSID 482
Query: 482 FEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDST 541
+++L L++++D+N+YP E A SN R RP+G+G GL D F L +PFDS
Sbjct: 483 WDRLDSTVRTAVTFLDRVVDINFYPTEQAGNSNSRWRPVGLGAMGLQDVFFQLRLPFDSP 542
Query: 542 EAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWG--VNPSDRWD 599
EA+ L+ I E I A S ++A R GP + + ++G+L PD + +N +RWD
Sbjct: 543 EARALSTKISERIMLAAYEASCDLAERSGPLPAWSETRAARGVLHPDHYATELNWPERWD 602
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
LR ++K G+RNSLL+A PTA+ + I G EC EP SN++ R LSGEF+ VN +
Sbjct: 603 --ALRARVAKTGMRNSLLLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNAY 660
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
L+ +L ++G+W + + GSVQ IPE+++A+Y+T WEI Q+ L+DMA R
Sbjct: 661 LVDELKKLGVWDARTREALREASGSVQGFAWIPEDVRALYRTAWEIPQRGLIDMAAARTP 720
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN 779
++D SQSLN+ ++ P GKL+S++ +AW +GLKT YYLRSR A + +
Sbjct: 721 FLDQSQSLNLFLETPTIGKLSSMYAYAWKQGLKT-TYYLRSRPATRIARAASGQASAAAP 779
Query: 780 PKVTDDDDAKMAQMVCSLTNREECMAC 806
V + CSL N E C AC
Sbjct: 780 IPVQQASAPDADAIACSLENPESCEAC 806
>gi|365866749|ref|ZP_09406353.1| putative ribonucleoside-diphosphate reductase large subunit
[Streptomyces sp. W007]
gi|364003828|gb|EHM24964.1| putative ribonucleoside-diphosphate reductase large subunit
[Streptomyces sp. W007]
Length = 773
Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust.
Identities = 306/796 (38%), Positives = 448/796 (56%), Gaps = 51/796 (6%)
Query: 29 LSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHK 88
+ + DP V+ G ++L LA E AA + + P Y+ LAAR++ +
Sbjct: 10 VDLPDTDPGRVAAAALRGRNARSDEAELRSLATEAAAGLISEDPAYSRLAARLLTRTIAD 69
Query: 89 NTK----KSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLD---SEIIYD-RD 140
SFS ++ G + LIAD + ++A LD + + D D
Sbjct: 70 EAAGQGATSFSASVA---------VGHREGLIADRTAAFVALHSAALDRLVEQALADGAD 120
Query: 141 FDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRVAVGIHKDD----IDSAIKTYHMMS 194
+ YFG +TL YLL+ + +V+E PQH ++RVA G+ +D+ +D Y +MS
Sbjct: 121 DRFGYFGLRTLHSRYLLRHPLTRQVIETPQHFMLRVAAGLAEDESARALDEVAALYGLMS 180
Query: 195 QRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHN 254
+ + +SPTLFN+GT Q+SSC+L+ D ++ IYD + A +SK AGGIG+S
Sbjct: 181 RLDYLPSSPTLFNSGTRHPQMSSCYLLDSPKDELDSIYDRYHQVARLSKHAGGIGLSYSR 240
Query: 255 IRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDL 314
IRA GS IRGTNG SNGIVP L+ + + V+QGG +RKGA AVYLE WHADI EFL+L
Sbjct: 241 IRARGSLIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLETWHADIEEFLEL 299
Query: 315 RKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKY 374
R N G+++ R +L A W+PD FM RV ++ WSLF P + P L D WG F+ Y
Sbjct: 300 RDNTGEDQRRTHNLNLAHWIPDEFMRRVDADTEWSLFSPADVPELVDLWGDAFDAAYRAA 359
Query: 375 EKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQ--QNLGTIKSSNLCTEV 432
E +G A++ + A+ L+ ++++ +TG +M FKD N+ +NQ + + SSNLCTE+
Sbjct: 360 EAKGLARRTIPARELYGRMMRTLAQTGQGWMTFKDASNRTANQTAEPGRVVHSSNLCTEI 419
Query: 433 IQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIV 492
++ T ETAVCNL S+ L +V + + D+++L
Sbjct: 420 LEVTDDGETAVCNLGSVNLGAFVADGSI--------------------DWDRLDATVRTA 459
Query: 493 TENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFE 552
L++++D+N+YP E A RSN R RP+G+G GL D F L +PFDS EA+ L+ I E
Sbjct: 460 VTFLDRVVDINFYPTEQAGRSNSRWRPVGLGAMGLQDVFFQLRLPFDSPEARALSTRISE 519
Query: 553 TIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWG--VNPSDRWDWGGLRDMISKN 610
I A S ++A R GP + + ++G+L PD + +N +RWD LR I+K
Sbjct: 520 RIMLAAYEASCDLAERSGPLPAWSETRAARGVLHPDHYATELNWPERWD--ALRARIAKT 577
Query: 611 GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLW 670
G+RNSLL+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ +L ++G+W
Sbjct: 578 GMRNSLLLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNAYLVDELKQLGVW 637
Query: 671 SPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIH 730
+ + GSVQ IPE+++A+Y+T WEI Q+ L+DMA R ++D SQSLN+
Sbjct: 638 DARTREALREASGSVQGFAWIPEDVRALYRTAWEIPQRGLIDMAAARTPFLDQSQSLNLF 697
Query: 731 MDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAKM 790
++ P GKL+S++ +AW +GLKT YYLRSR A + + V
Sbjct: 698 LETPTIGKLSSMYAYAWKQGLKT-TYYLRSRPATRIARAASGQASAAAPIPVQQASAPDA 756
Query: 791 AQMVCSLTNREECMAC 806
+ CSL N E C AC
Sbjct: 757 DAIACSLENPESCEAC 772
>gi|149927166|ref|ZP_01915423.1| ribonucleotide-diphosphate reductase alpha subunit [Limnobacter sp.
MED105]
gi|149824105|gb|EDM83326.1| ribonucleotide-diphosphate reductase alpha subunit [Limnobacter sp.
MED105]
Length = 969
Score = 556 bits (1434), Expect = e-155, Method: Compositional matrix adjust.
Identities = 308/770 (40%), Positives = 449/770 (58%), Gaps = 45/770 (5%)
Query: 26 SYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSN 85
S + + D + ++ +Y GV ++ + A + AM N P Y + +R+++
Sbjct: 165 SAAVGLNEIDVAHLQKETLKNLYDGVKIDEVFKSAILASRAMIENEPSYTLVTSRLLLHT 224
Query: 86 LHKNT--KKSFSETIKDMYNHYNE---RSGLKAPLIADDVYDIIMKNAARLDSEIIYDRD 140
+ + ++ + + +Y Y + G+ A L+ + + MK +L + + Y+RD
Sbjct: 225 IRREIIGREIAQDEMAQVYPEYFPQFIKKGIAAGLLDNRLAQFDMK---KLGAALKYERD 281
Query: 141 FDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRW 197
+DY G +TL Y L V+G +E PQ MRVA+G+ +++D AI+ Y ++S
Sbjct: 282 LQFDYLGLQTLYDRYFLHVEGTRIEMPQAFYMRVAMGLALNEVDREARAIEFYEVLSTFD 341
Query: 198 FTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRA 257
F ++PTLFN+GT R+QLSSC+L + DD ++ IY+ +KE A++SK AGG+G +RA
Sbjct: 342 FMSSTPTLFNSGTIRSQLSSCYLTTIGDD-LDDIYEGIKENALLSKFAGGLGNDWTPVRA 400
Query: 258 TGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKN 317
GS+I+GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN
Sbjct: 401 LGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHMDIEEFLELRKN 459
Query: 318 HGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKE 377
G + R D+ A W+PDLFM+RV G W+LF P++ P L D +G FE+ Y YE++
Sbjct: 460 TGDDRRRTHDMNTANWIPDLFMKRVMEGGNWTLFSPSDCPDLHDLYGKAFEKAYVGYEEK 519
Query: 378 G-----KAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEV 432
K K V+A LW +IL ETG P++ FKD CN +S QQ++G + SSNLCTE+
Sbjct: 520 AARGDLKLFKTVEAAKLWRKILSMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEI 579
Query: 433 IQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIV 492
T+ E AVCNL S+ L R+++ P ++ +LV D EKL + G+
Sbjct: 580 TLNTNENEIAVCNLGSVNLTRHLK----PADN--GELV---------LDHEKLQKTVGVA 624
Query: 493 TENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFE 552
L+ +ID+NYY V AR SNLRHRP+G+G+ G D ++ P+ S +A + + E
Sbjct: 625 MRMLDNVIDINYYAVAKARNSNLRHRPVGMGMMGFQDALHMMRKPYASRDAVEFADESME 684
Query: 553 TIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWG-----------VNPSDRWDWG 601
I Y+A S+E+AA G Y T+ GS KGI+ D V+ S R DW
Sbjct: 685 AICYYAYEASTELAAERGAYSTFKGSLWDKGIMPLDSLKLLEEERGGYVEVDTSSRMDWD 744
Query: 602 GLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLL 661
LR I K+G+RNS VA PTA+ S I+G EP N+Y + LSGEF +VN+HL+
Sbjct: 745 ALRARIKKHGMRNSNCVAIAPTATISNIIGVAASIEPTFQNLYVKSNLSGEFTIVNEHLV 804
Query: 662 HDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYI 721
DL +G+W ++ + + Y DGSV KI +IPE+LK +Y T +E+ + LV+ A R +I
Sbjct: 805 RDLKRLGIWDEVMISDLKYFDGSVMKIDRIPEDLKRLYATAFEMDPRWLVEAAARRQKWI 864
Query: 722 DHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTV 771
D QSLNI+M + +L + AW+RGLKT YYLR+ A A K T+
Sbjct: 865 DQGQSLNIYMAGVSGKRLDDTYKLAWIRGLKT-TYYLRTIGATHAEKSTL 913
>gi|239990629|ref|ZP_04711293.1| putative ribonucleoside-diphosphate reductase large subunit
[Streptomyces roseosporus NRRL 11379]
gi|291447644|ref|ZP_06587034.1| ribonucleotide-diphosphate reductase large chain [Streptomyces
roseosporus NRRL 15998]
gi|291350591|gb|EFE77495.1| ribonucleotide-diphosphate reductase large chain [Streptomyces
roseosporus NRRL 15998]
Length = 807
Score = 556 bits (1433), Expect = e-155, Method: Compositional matrix adjust.
Identities = 309/807 (38%), Positives = 451/807 (55%), Gaps = 52/807 (6%)
Query: 19 TARLKKLS-YGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASL 77
TA L+ L+ + + DP V+ G ++L LA E AA + + P Y+ L
Sbjct: 33 TALLRTLTDLTVDLPDTDPGRVAAAALRGRNARSDEAELRSLATEAAAGLISEDPAYSRL 92
Query: 78 AARIVVSNLHKNTK----KSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDS 133
AAR++ ++ SFS ++ G + LIAD + +A LD
Sbjct: 93 AARLLTLSIADEAAGQGATSFSASVA---------VGHREGLIADRTAAFVELHAKALDE 143
Query: 134 ----EIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLMRVAVGIHKDD----I 183
+ D + YFG +TL YLL+ + +V+E PQH ++RVA G+ +D+ +
Sbjct: 144 LVERTLAEGADDRFGYFGLRTLHSRYLLRHPITRQVIETPQHFMLRVAAGLAEDESVRAL 203
Query: 184 DSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISK 243
D Y +MS+ + +SPTLFN+GT Q+SSC+L+ D ++ IYD + A +SK
Sbjct: 204 DEVAALYGLMSKLDYLPSSPTLFNSGTRHPQMSSCYLLDSPKDELDSIYDRYHQVARLSK 263
Query: 244 SAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEP 303
AGGIG+S IRA GS IRGTNG SNGIVP L+ + + V+QGG +RKGA AVYLE
Sbjct: 264 HAGGIGLSYSRIRARGSLIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKGAAAVYLET 322
Query: 304 WHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCW 363
WHADI EFL+LR N G+++ R +L A W+PD FM RV ++ WSLF P + P L D W
Sbjct: 323 WHADIEEFLELRDNTGEDQRRTHNLNLAHWIPDEFMRRVDADTEWSLFSPADVPELVDLW 382
Query: 364 GTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQ--QNLG 421
G F+ Y E +G A+K + A+ L+ ++++ +TG +M FKD N+ +NQ +
Sbjct: 383 GDAFDAAYRAAEAKGLARKTMPARELYGRMMRTLAQTGQGWMTFKDASNRTANQTAEPGR 442
Query: 422 TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFD 481
+ SSNLCTE+++ T+ ETAVCNL S+ L +V N D
Sbjct: 443 VVHSSNLCTEILEVTNDGETAVCNLGSVNLGAFV--------------------ANGSID 482
Query: 482 FEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDST 541
+++L L++++D+N+YP E A SN R RP+G+G GL D F L +PFDS
Sbjct: 483 WDRLDSTVRTAVTFLDRVVDINFYPTEQAGNSNSRWRPVGLGAMGLQDVFFQLRLPFDSP 542
Query: 542 EAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWG--VNPSDRWD 599
EA+ L+ I E I A S ++A R GP + + ++G+L PD + +N +RWD
Sbjct: 543 EARALSTKISERIMLAAYEASCDLAERSGPLPAWSETRAARGVLHPDHYDTELNWPERWD 602
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
LR ++K G+RNSLL+A PTA+ + I G EC EP SN++ R LSGEF+ VN +
Sbjct: 603 --ALRARVAKTGMRNSLLLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNAY 660
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
L+ +L ++G+W + + GSVQ IPE+++A+Y+T WEI Q+ L+DMA R
Sbjct: 661 LVDELKKLGVWDARTREALREASGSVQGFAWIPEDVRALYRTAWEIPQRGLIDMAAARTP 720
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN 779
++D SQSLN+ ++ P GKL+S++ +AW +GLKT YYLRSR A + +
Sbjct: 721 FLDQSQSLNLFLETPTIGKLSSMYAYAWKQGLKT-TYYLRSRPATRIARAASGQASAAAP 779
Query: 780 PKVTDDDDAKMAQMVCSLTNREECMAC 806
V + CSL N E C AC
Sbjct: 780 IPVQQASAPDADAIACSLENPESCEAC 806
>gi|357391821|ref|YP_004906662.1| putative ribonucleoside-diphosphate reductase subunit alpha
[Kitasatospora setae KM-6054]
gi|311898298|dbj|BAJ30706.1| putative ribonucleoside-diphosphate reductase subunit alpha
[Kitasatospora setae KM-6054]
Length = 804
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 315/796 (39%), Positives = 454/796 (57%), Gaps = 48/796 (6%)
Query: 31 IEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNT 90
+ DP V+ G + G ++L LA E AA+M P Y+ LAAR++ +
Sbjct: 36 LPQVDPGHVAAAALRGRHAGSDFAELRGLAVEAAASMIAEDPQYSKLAARLLALEIRDEA 95
Query: 91 KK----SFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYF 146
SFS ++ G LI D + +A DS + D ++YF
Sbjct: 96 ATQQVTSFSSSVA---------VGHAEGLIGDATAAFVAAHADLFDSLVDEAGDDRFEYF 146
Query: 147 GFKTLERSYLLK--VQGKVVERPQHMLMRVA----VGIHKDDIDSAIKTYHMMSQRWFTH 200
G +T++ YLL+ + KVVE PQH L+RVA VG ++ + + Y +MS+ +
Sbjct: 147 GLRTVQSRYLLRHPITRKVVETPQHFLLRVAAGLAVGTSEESVREVAELYTLMSRLEYLT 206
Query: 201 ASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGS 260
+SPTLFN+GT Q+SSC+L+ D+++ IY+ + A +SK AGGIG+S IR+ GS
Sbjct: 207 SSPTLFNSGTRHPQMSSCYLLDSPLDNLDSIYNRYAQIARLSKHAGGIGLSYSRIRSRGS 266
Query: 261 YIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGK 320
IRGTNG SNGIVP LR + + V+QGG +RKGA VYLE WHADI EFL+LR N G+
Sbjct: 267 LIRGTNGQSNGIVPFLRTLDSSVAAVNQGG-RRKGAACVYLETWHADIEEFLELRDNTGE 325
Query: 321 EEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKA 380
E R +L A W+PD FM RV +N WSLF P + P L D WG +F+ Y K E GKA
Sbjct: 326 EARRTHNLNLAHWIPDEFMRRVNANADWSLFSPADVPELVDLWGADFDEAYVKAELAGKA 385
Query: 381 KKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG--TIKSSNLCTEVIQYTSP 438
+ + AQ L+ ++++ +TG +M FKD N+ +NQ L T+ SSNLCTE+++ T
Sbjct: 386 VRTIPAQTLYARMMRTLAQTGNGWMTFKDASNRAANQTALPGRTVHSSNLCTEILEVTDD 445
Query: 439 TETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNK 498
+ETAVCNL S+ L +V P + L D+++L L++
Sbjct: 446 SETAVCNLGSVNLGAHV----APGATAADLL--------NAMDWDRLDATVRTAVTFLDR 493
Query: 499 IIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHA 558
+ID+N+YP A SN R RP+G+GV GL D F L + FDS EA L+ I E I A
Sbjct: 494 VIDINFYPTTEAGTSNSRWRPVGLGVMGLQDVFFQLRIDFDSAEAVALSTLIAERIMLTA 553
Query: 559 LRTSSEIAAREGPYETYHGSPVSKGILQPDMWGV-NP--SDRWDWGGLRDMISKNGVRNS 615
S+++A R G +E Y + ++G L D +G NP ++RWD LR I++ G+RNS
Sbjct: 554 YERSADLAERFGRHEAYGETRAARGQLHVDHFGAANPQWTERWD--ALRARIAEVGLRNS 611
Query: 616 LLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIK 675
LL+A PTA+ + I G EC EP SN++ R LSGEF+ VN +L+ +L E+G+W +
Sbjct: 612 LLLAIAPTATIASIAGVYECIEPQVSNLFKRETLSGEFLQVNPYLVRELKELGVWDQQTR 671
Query: 676 NKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPN 735
+ + +GS+Q+ +P+E++++Y+T WE+ Q+ L+D+A R YID SQSLN+ M P
Sbjct: 672 DALRDANGSIQEFNWLPQEVRSLYRTAWELPQRALIDLAAARQPYIDQSQSLNLFMAAPT 731
Query: 736 FGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTS-----VLKENPKVTDDDDAKM 790
GKL+S++ +AW GLKT YYLRSR A + + V + P ++ A+
Sbjct: 732 IGKLSSMYSYAWKVGLKT-TYYLRSRPATRIAQAAPGAARTAAPVPVQTPTLS---QAEQ 787
Query: 791 AQMVCSLTNREECMAC 806
+ CSL N E C AC
Sbjct: 788 DAIACSLENPESCEAC 803
>gi|154269831|ref|XP_001535822.1| hypothetical protein HCAG_09248 [Ajellomyces capsulatus NAm1]
gi|150409470|gb|EDN04916.1| hypothetical protein HCAG_09248 [Ajellomyces capsulatus NAm1]
Length = 524
Score = 556 bits (1432), Expect = e-155, Method: Compositional matrix adjust.
Identities = 267/437 (61%), Positives = 320/437 (73%), Gaps = 35/437 (8%)
Query: 341 RVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIET 400
RV+ NG W+LFCPNEAPGLAD +G EFE LY KYEKEG+ KK V+AQ LW+ IL++Q ET
Sbjct: 1 RVEKNGEWTLFCPNEAPGLADVYGDEFEALYEKYEKEGRGKKTVKAQKLWYAILEAQTET 60
Query: 401 GTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGV 460
G P+ML+KD+CN+KSNQ+NLGTI+SSNLCTE+I+Y SP E AVCNLASIALP +V +
Sbjct: 61 GNPFMLYKDSCNRKSNQKNLGTIRSSNLCTEIIEYCSPDEVAVCNLASIALPTFVDPI-- 118
Query: 461 PMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPI 520
RG +DF KL EVT +V NLNKIID NYYPVE A+RSN RHRPI
Sbjct: 119 ------------RGE----YDFGKLHEVTQVVVRNLNKIIDRNYYPVEEAKRSNFRHRPI 162
Query: 521 GIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPV 580
GVQGLAD F+ L +PFDS EA+QLN IFETIY+ L S E+A +GPY TY GSPV
Sbjct: 163 ACGVQGLADAFLALRLPFDSPEAKQLNIQIFETIYHAGLTASCELAKVDGPYSTYEGSPV 222
Query: 581 SKGILQPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYT 640
S+GILQ DMW V P+D WDW L+ I+K+G ILG NECFEPYT
Sbjct: 223 SQGILQYDMWNVTPTDLWDWDSLKQDIAKHG-----------------ILGFNECFEPYT 265
Query: 641 SNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYK 700
SNIYSRRVL+GEF +VN LL DL +MGLWS +KN+II + GS+Q IP IP+++KA+YK
Sbjct: 266 SNIYSRRVLAGEFQIVNPWLLKDLVDMGLWSDNMKNRIIAEGGSIQNIPNIPQDIKALYK 325
Query: 701 TVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRS 760
TVWEI Q+T+V MA DRG +ID SQSLNIH+ +P GK+TS+HF W GLKTGMYYLR+
Sbjct: 326 TVWEISQRTIVQMAADRGAFIDQSQSLNIHLKEPTMGKITSMHFTGWKLGLKTGMYYLRT 385
Query: 761 RAAADAIKFTVDTSVLK 777
AA+ I+FTVD LK
Sbjct: 386 MAASAPIQFTVDQEQLK 402
>gi|345001979|ref|YP_004804833.1| ribonucleoside-diphosphate reductase subunit alpha [Streptomyces
sp. SirexAA-E]
gi|344317605|gb|AEN12293.1| ribonucleoside-diphosphate reductase, alpha subunit [Streptomyces
sp. SirexAA-E]
Length = 803
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 321/818 (39%), Positives = 460/818 (56%), Gaps = 59/818 (7%)
Query: 11 EAVHFDKITARLKKLS-YGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTT 69
EA + TA L+ L+ + + DP V+ G ++L LA E AA + +
Sbjct: 22 EATNDGPGTALLRTLTDLTVDLPDTDPGRVAAAALRGRNARSDEAELRSLATEAAAGLIS 81
Query: 70 NHPDYASLAARIVVSNLHKNTK----KSFSETIKDMYNHYNERSGLKAPLIADDVYDIIM 125
P Y+ LAAR++ + SFS ++ G + LIAD +
Sbjct: 82 EDPAYSRLAARLLTLTIADEAAGQGATSFSASVA---------VGHREGLIADRTAAFVE 132
Query: 126 KNAARLDSEI---IYD-RDFDYDYFGFKTLERSYLLKV--QGKVVERPQHMLMRVAVGIH 179
++A LD+ + + D D + YFG +TL YLL+ +V+E PQH ++RVA G+
Sbjct: 133 QHAQVLDALVERTLADGADDRFGYFGLRTLHSRYLLRHPHTRQVIETPQHFMLRVAAGLA 192
Query: 180 KDDI----DSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTL 235
+D+ D Y +MS+ + +SPTLFN+GT Q+SSC+L+ D ++ IYD
Sbjct: 193 EDESVRARDEVAALYGLMSRLDYLPSSPTLFNSGTRHPQMSSCYLLDSPKDELDSIYDRY 252
Query: 236 KECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG 295
+ A +SK AGGIG+S IRA GS IRGTNG SNGIVP L+ + + V+QGG +RKG
Sbjct: 253 HQVARLSKHAGGIGLSYSRIRARGSLIRGTNGHSNGIVPFLKTLDASVAAVNQGG-RRKG 311
Query: 296 AFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNE 355
A AVYLE WHADI EFL+LR N G+++ R +L A W+PD FM RV ++ WSLF P +
Sbjct: 312 AAAVYLETWHADIEEFLELRDNTGEDQRRTHNLNLAHWIPDEFMRRVDADTEWSLFSPAD 371
Query: 356 APGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKS 415
P L D WG F+ Y E G A+K + A+ L+ ++++ +TG +M FKD N+ +
Sbjct: 372 VPELTDLWGDAFDAAYRAAEARGLARKTMPARELYGRMMRTLAQTGQGWMTFKDASNRTA 431
Query: 416 NQ--QNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSR 473
NQ + + SSNLCTE+++ T ETAVCNL S+ L +V S
Sbjct: 432 NQTAEPGRVVHSSNLCTEILEVTDDGETAVCNLGSVNLGAFV----------------SG 475
Query: 474 GSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFIL 533
GS D+E+L L++++D+N+YP E A SN R RP+G+G GL D F
Sbjct: 476 GS----IDWERLDATVRTAVTFLDRVVDINFYPTEQAGTSNARWRPVGLGAMGLQDVFFQ 531
Query: 534 LGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWG-- 591
L +PFDS EA+ L+ I E I A S ++A R GP + + ++G+L PD +
Sbjct: 532 LRLPFDSPEARALSTRISERIMLAAYEASCDLAERSGPLPAWSETRAARGVLHPDHYATE 591
Query: 592 VNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSG 651
+N +RWD LR I+K G+RNSLL+A PTA+ + I G EC EP SN++ R LSG
Sbjct: 592 LNWPERWD--ALRARIAKTGMRNSLLLAIAPTATIASIAGVYECIEPQVSNLFKRETLSG 649
Query: 652 EFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLV 711
EF+ VN +L+ +L ++G+W + + GSVQ IPE+++A+Y+T WEI Q+ L+
Sbjct: 650 EFLQVNGYLVEELKKLGVWDARTREALREASGSVQGFGWIPEDVRALYRTAWEIPQRGLI 709
Query: 712 DMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAA---ADAIK 768
DMA R ++D SQSLN+ ++ P GKL+S++ +AW +GLKT YYLRSR A A A
Sbjct: 710 DMAAARTPFLDQSQSLNLFLETPTIGKLSSMYAYAWKQGLKT-TYYLRSRPATRIARAAS 768
Query: 769 FTVDTSVLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
++ L D DA + CSL N E C AC
Sbjct: 769 GRTASAALPAQQAQAPDADA----IACSLENPESCEAC 802
>gi|350545920|ref|ZP_08915360.1| Ribonucleotide reductase of class Ia (aerobic),alpha subunit
[Candidatus Burkholderia kirkii UZHbot1]
gi|350526296|emb|CCD40808.1| Ribonucleotide reductase of class Ia (aerobic),alpha subunit
[Candidatus Burkholderia kirkii UZHbot1]
Length = 1013
Score = 555 bits (1430), Expect = e-155, Method: Compositional matrix adjust.
Identities = 314/772 (40%), Positives = 437/772 (56%), Gaps = 49/772 (6%)
Query: 34 CDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNT--- 90
DP++ + +Y GV SQ+ + A A M P Y+ + ARI++ + +
Sbjct: 193 ADPIVA--ETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARILLHTIRREILEG 250
Query: 91 ---KKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFG 147
+ E + + + +R G++A L+ D + +K RL + + +RD + Y G
Sbjct: 251 EVPQAEMGERYAEYFPLFIKR-GVEAGLLDDKLQQFDLK---RLGTALDTNRDLQFGYLG 306
Query: 148 FKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASPT 204
+TL Y L V G +E PQ MRVA+G+ ++ID AI+ Y ++S F ++PT
Sbjct: 307 LQTLYDRYFLHVDGTRIELPQAFFMRVAMGLSLNEIDREARAIEFYQVLSSFDFMSSTPT 366
Query: 205 LFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRG 264
LFN+GT R+QLSSC+L + DD ++GIY+ LKE A++SK AGG+G +RA GS+I+G
Sbjct: 367 LFNSGTHRSQLSSCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIKG 425
Query: 265 TNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHR 324
TNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R
Sbjct: 426 TNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRRR 484
Query: 325 ARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EGK 379
D+ A W+PDLFM+RV G W+LF P+ P L D +G +FE+ YT YE+ E K
Sbjct: 485 THDMNTANWIPDLFMKRVMEGGDWTLFSPSTCPDLHDLFGADFEKAYTAYEEKAARGEIK 544
Query: 380 AKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPT 439
K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ TS T
Sbjct: 545 LFKKIPAAQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDT 604
Query: 440 ETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKI 499
E AVCNL S+ L ++ E + D KL + L+ +
Sbjct: 605 EIAVCNLGSVNLVAHIVE---------------QADSTYALDHAKLKRTISVAMRMLDNV 649
Query: 500 IDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHAL 559
ID+NYY V AR SNLRHRP+G+G+ G D LL P+ S EA + E + Y+A
Sbjct: 650 IDINYYAVPKARNSNLRHRPVGMGIMGFQDCLYLLRTPYASAEAVEFADRSMEAVCYYAY 709
Query: 560 RTSSEIAAREGPYETYHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRDMIS 608
S+E+A G Y +Y GS +GIL D V+ S DW LR IS
Sbjct: 710 YASTELAEERGRYSSYRGSLWDRGILPQDSLKLLAEARGGYVEVDTSASMDWPALRSRIS 769
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMG 668
G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL G
Sbjct: 770 TYGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNDYLVRDLKARG 829
Query: 669 LWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLN 728
LW ++ + + Y DG++ +I +IP +L+AIY T +E+ K LV+ A R +ID +QSLN
Sbjct: 830 LWDEVMVSDLKYFDGTLSRIDRIPADLRAIYATAFEVDPKWLVEAAAHRQKWIDQAQSLN 889
Query: 729 IHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
I+M + KL ++ AW+RGLKT YYLR+ AA K TV L P
Sbjct: 890 IYMAGASGKKLDEVYKLAWIRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 940
>gi|421477360|ref|ZP_15925187.1| ribonucleoside-diphosphate reductase, alpha subunit, partial
[Burkholderia multivorans CF2]
gi|400226640|gb|EJO56703.1| ribonucleoside-diphosphate reductase, alpha subunit, partial
[Burkholderia multivorans CF2]
Length = 957
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 319/773 (41%), Positives = 438/773 (56%), Gaps = 53/773 (6%)
Query: 35 DPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSF 94
DP++ + +Y GV SQ+ + A A M P Y+ + ARI+ LH ++
Sbjct: 189 DPIVA--ETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARIL---LHTIRREIL 243
Query: 95 SETI--KDMYNHYNE------RSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYF 146
E + DM Y E + G++A L+ D + +K RL + RD + Y
Sbjct: 244 GEEVVQADMSTRYAEYFPQFLKRGVEAGLLDDKLLQFDLK---RLGEALDASRDLQFGYL 300
Query: 147 GFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASP 203
G +TL Y L V G +E PQ MRVA+G+ ++ID AI+ Y+++S F ++P
Sbjct: 301 GLQTLYDRYFLHVDGTRIEMPQAFFMRVAMGLSLNEIDREARAIEFYNVLSSFDFMSSTP 360
Query: 204 TLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT R+QLSSC+L + DD ++GIY+ LKE A++SK AGG+G +RA GS+I+
Sbjct: 361 TLFNSGTHRSQLSSCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIK 419
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEH 323
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G +
Sbjct: 420 GTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRR 478
Query: 324 RARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EG 378
R D+ A W+PDLFM+RV G W+LF P+ P L D +G +FE YT YE+ E
Sbjct: 479 RTHDMNTANWIPDLFMKRVMEGGEWTLFSPSTCPDLHDKFGADFEAAYTAYEEKVARGEI 538
Query: 379 KAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSP 438
K K + AQ LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ TS
Sbjct: 539 KLFKKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSD 598
Query: 439 TETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNK 498
TE AVCNL S+ L + + P D +KL + L+
Sbjct: 599 TEIAVCNLGSVNLVAH-------LVKQPDGTYA--------LDHDKLKRTISVAMRMLDN 643
Query: 499 IIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHA 558
+ID+NYY V AR SNL+HRP+G+G+ G D LL P+ S A + E + Y+A
Sbjct: 644 VIDINYYAVPKARNSNLKHRPVGLGIMGFQDCLHLLRTPYASEAAVEFADRSMEAVCYYA 703
Query: 559 LRTSSEIAAREGPYETYHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRDMI 607
S+E+A G Y +Y GS +GIL D V+ S+ DW LR I
Sbjct: 704 YYASTELAEERGRYSSYRGSLWDRGILPQDTLKLLAEARGGYVEVDSSESLDWATLRARI 763
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEM 667
+ +G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L+ DL E
Sbjct: 764 ATHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKER 823
Query: 668 GLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSL 727
GLW ++ + Y DG + +I +IP +L+AIY T +E+ K LV+ A R +ID +QSL
Sbjct: 824 GLWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQSL 883
Query: 728 NIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
NI+M + KL ++ AWLRGLKT YYLR+ AA K TV L P
Sbjct: 884 NIYMAGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 935
>gi|421473516|ref|ZP_15921619.1| ribonucleoside-diphosphate reductase, alpha subunit, partial
[Burkholderia multivorans ATCC BAA-247]
gi|400220732|gb|EJO51244.1| ribonucleoside-diphosphate reductase, alpha subunit, partial
[Burkholderia multivorans ATCC BAA-247]
Length = 939
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 319/773 (41%), Positives = 441/773 (57%), Gaps = 53/773 (6%)
Query: 35 DPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSF 94
DP++ + +Y GV SQ+ + A A M P Y+ + ARI+ LH ++
Sbjct: 189 DPIVA--ETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARIL---LHTIRREIL 243
Query: 95 SETI--KDMYNHYNE------RSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYF 146
E + DM Y E + G++A L+ D + +K RL + RD + Y
Sbjct: 244 GEEVVQADMSTRYAEYFPQFLKRGVEAGLLDDKLLQFDLK---RLGEALDASRDLQFGYL 300
Query: 147 GFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASP 203
G +TL Y L V G +E PQ MRVA+G+ ++ID AI+ Y+++S F ++P
Sbjct: 301 GLQTLYDRYFLHVDGTRIEMPQAFFMRVAMGLSLNEIDREARAIEFYNVLSSFDFMSSTP 360
Query: 204 TLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT R+QLSSC+L + DD ++GIY+ LKE A++SK AGG+G +RA GS+I+
Sbjct: 361 TLFNSGTHRSQLSSCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIK 419
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEH 323
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G +
Sbjct: 420 GTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRR 478
Query: 324 RARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EG 378
R D+ A W+PDLFM+RV G W+LF P+ P L D +G +FE YT YE+ E
Sbjct: 479 RTHDMNTANWIPDLFMKRVMEGGEWTLFSPSTCPDLHDKFGADFEAAYTAYEEKVARGEI 538
Query: 379 KAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSP 438
K K + AQ LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ TS
Sbjct: 539 KLFKKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSD 598
Query: 439 TETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNK 498
TE AVCNL S+ L ++ + P ++ D +KL + L+
Sbjct: 599 TEIAVCNLGSVNLVAHLVKQ--PDGTYA-------------LDHDKLKRTISVAMRMLDN 643
Query: 499 IIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHA 558
+ID+NYY V AR SNL+HRP+G+G+ G D LL P+ S A + E + Y+A
Sbjct: 644 VIDINYYAVPKARNSNLKHRPVGLGIMGFQDCLHLLRTPYASEAAVEFADRSMEAVCYYA 703
Query: 559 LRTSSEIAAREGPYETYHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRDMI 607
S+E+A G Y +Y GS +GIL D V+ S+ DW LR I
Sbjct: 704 YYASTELAEERGRYSSYRGSLWDRGILPQDTLKLLAEARGGYVEVDSSESLDWATLRARI 763
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEM 667
+ +G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L+ DL E
Sbjct: 764 ATHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKER 823
Query: 668 GLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSL 727
GLW ++ + Y DG + +I +IP +L+AIY T +E+ K LV+ A R +ID +QSL
Sbjct: 824 GLWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQSL 883
Query: 728 NIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
NI+M + KL ++ AWLRGLKT YYLR+ AA K TV L P
Sbjct: 884 NIYMAGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 935
>gi|149916692|ref|ZP_01905194.1| ribonucleoside-diphosphate reductase, alpha subunit [Plesiocystis
pacifica SIR-1]
gi|149822409|gb|EDM81798.1| ribonucleoside-diphosphate reductase, alpha subunit [Plesiocystis
pacifica SIR-1]
Length = 792
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 306/759 (40%), Positives = 446/759 (58%), Gaps = 38/759 (5%)
Query: 56 LDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKK----SFSETIKDMYNHYNERSGL 111
LDEL A TA PDY+ LAARI+ + + SF +++ ++ R GL
Sbjct: 63 LDELLARTAVGWIVEEPDYSKLAARILAGAIAREAASQGVTSFLNSVETLH-----RLGL 117
Query: 112 KAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQH 169
+ +AA L++ + + D ++YFG +T+ YL++ +V+E PQH
Sbjct: 118 GNA----RALNFARAHAATLEAALDREGDRRFEYFGLRTVFDRYLMRHPKTRRVLETPQH 173
Query: 170 MLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIE 229
MRVA + D D A+ Y + S+ + +SPTLFNAGT R QLSSCFL+ D +
Sbjct: 174 FFMRVAAALAVDP-DEAVALYGLFSRLDYLPSSPTLFNAGTHREQLSSCFLLDSPADHLV 232
Query: 230 GIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQG 289
IY+ + A +SK +GGIG++ H +R+ GS I TNG SNGIVP L+ + + V+QG
Sbjct: 233 DIYERYTDVAKLSKFSGGIGLAYHRVRSRGSLIGDTNGHSNGIVPWLKTLDASVAAVNQG 292
Query: 290 GGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWS 349
G +RKGA VYLE WHAD+ EFL+LR N G E RA +L A W+PD FM RV ++ WS
Sbjct: 293 G-RRKGACCVYLETWHADLPEFLELRDNTGNEYARAHNLNLANWIPDEFMRRVAADEGWS 351
Query: 350 LFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKD 409
LF P D +G F R Y + E+ G A + A+ L+ ++++ +TG +M FKD
Sbjct: 352 LFDPKTVRHFPDLYGEAFTRAYVEAERAGLAVATLPARELYARMMRTLAQTGNGWMCFKD 411
Query: 410 TCNKKSNQQNLG--TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPS 467
CN NQ T+ SNLCTE+++ TSP ETAVCNL SI L ++R P++
Sbjct: 412 RCNSTCNQTARPGRTVHLSNLCTEIVEVTSPEETAVCNLGSINLGHHLR----PID---- 463
Query: 468 KLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
G + D+ KL + L+++ID+N+YP+ETA +SN R RP+G+G GL
Sbjct: 464 ---GGGTQADWEVDWAKLGRSVTLAVRALDRVIDLNFYPLETAAKSNARWRPVGLGTMGL 520
Query: 528 ADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQP 587
D + LG+ FDS A++L + + E +Y+HALRTS ++A + GP+ + + + G LQ
Sbjct: 521 HDLLLRLGLDFDSPAARELARRVAEHVYFHALRTSCDLARQHGPHPAFPETRAADGQLQF 580
Query: 588 DMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRR 647
D+WGV P + W LR ++ +G+RNSLLVA PTA+ + I G EC EP SN+ R
Sbjct: 581 DLWGVEPGEDLPWDTLRRDVASHGLRNSLLVAVAPTATIASIAGCYECIEPAVSNLVKRE 640
Query: 648 VLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQ 707
LSGEF+ VN++L+ +L +GLW ++ + D+GSVQ I ++PE L+ ++T WE+
Sbjct: 641 TLSGEFIQVNRYLIDELRRLGLWDEAMRAALKRDNGSVQGIARVPEALRRRFRTAWELPM 700
Query: 708 KTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAI 767
+ L+DMA RG +ID SQSLN+ ++ P+ +L++++F+AW GLKT YYLRSR A+
Sbjct: 701 RALIDMAAARGPFIDQSQSLNLFVESPDLTRLSAMYFYAWKAGLKT-TYYLRSRPASGIA 759
Query: 768 KFTVDTSVLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
K TVD + K + + + CSL N E C AC
Sbjct: 760 KATVDPANAKPKQRSAE-------ALACSLENPEACEAC 791
>gi|75677069|ref|YP_319490.1| ribonucleotide-diphosphate reductase subunit alpha [Nitrobacter
winogradskyi Nb-255]
gi|74421939|gb|ABA06138.1| ribonucleotide reductase large subunit [Nitrobacter winogradskyi
Nb-255]
Length = 969
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 316/798 (39%), Positives = 445/798 (55%), Gaps = 64/798 (8%)
Query: 7 DGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAA 66
DG A+ ++TA +++ GL +L +Y G++ +L + A
Sbjct: 157 DGSLIALDTPRLTAVVEEACAGLGDVSASAILTETH--RNLYDGISVDELAQAPILAART 214
Query: 67 MTTNHPDYASLAARI------------VVSNLHKNTKKSFSETIKDMYNHYNERSGLKAP 114
+ PDYA ++AR+ V L + T+ +E D + Y R+G+
Sbjct: 215 LVETDPDYAKVSARLLLDKMRREALSFVAGRLEQATQAEMAERYADYFLSY-VRAGIDHE 273
Query: 115 LIADDV--YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLM 172
L+ ++ +D+ RL + + +RD +DY G +TL Y L V+ E PQ M
Sbjct: 274 LLDPEIGRFDL-----DRLAAALKPERDLRFDYLGLQTLYDRYFLHVRSVRFELPQAFFM 328
Query: 173 RVAVGIHKDDID---SAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIE 229
RVA G+ +ID AI Y ++S F ++PTLFNAGT R QLSSCFL + DD ++
Sbjct: 329 RVACGLALREIDREEKAIAFYDLLSSFDFMASTPTLFNAGTLRPQLSSCFLTTVADD-LD 387
Query: 230 GIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQG 289
GI+ +K+ A++SK AGG+G +R G++I+GTNG S G+VP L+V NDTA V+QG
Sbjct: 388 GIFKAIKDNALLSKYAGGLGNDWTRVRGLGAHIKGTNGESQGVVPFLKVANDTAIAVNQG 447
Query: 290 GGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWS 349
G KRKGA YLE WH DI EFLDLRKN G + R D+ A WVPDLFM+RV+ +G+W+
Sbjct: 448 G-KRKGAVCAYLETWHIDIEEFLDLRKNTGDDRRRTHDMNTANWVPDLFMQRVEEDGMWT 506
Query: 350 LFCPNEAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQIETGTPY 404
LF P+E P L D G F Y YE+ E + K V+A +LW +L ETG P+
Sbjct: 507 LFSPDETPDLHDLTGKAFAGRYAYYEEKAARGELRVTKQVRAVDLWRRMLTMLFETGHPW 566
Query: 405 MLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMES 464
+ FKD CN +S QQ+ G + SSNLCTE+ TS TE AVCNL S+ L ++
Sbjct: 567 ITFKDPCNLRSPQQHCGVVHSSNLCTEITLNTSNTEVAVCNLGSVNLVNHI--------- 617
Query: 465 HPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGV 524
K+ D E LA I L+ ++DVN+Y + AR SNLRHRP+G+G+
Sbjct: 618 -----------KDGKLDHEHLARTVRIAMRMLDNVLDVNFYTIPEARTSNLRHRPVGLGI 666
Query: 525 QGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGI 584
G D +L +P+ S EA + E I YHA+ S E+AA G Y +Y GS SKG+
Sbjct: 667 MGFQDALNILRLPYASDEAVSFADESMEAIAYHAISGSVELAAERGRYPSYQGSLWSKGV 726
Query: 585 LQPDMW-----------GVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNN 633
L D ++ S R DW LR + G+RNS +A PTA+ S I G +
Sbjct: 727 LPLDSLELVDEARGAEVDIDRSSRLDWDSLRQRVMTIGMRNSNCMAIAPTATISNICGVS 786
Query: 634 ECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPE 693
+ EP N+Y + +SG+F VVN HL+ DL GLW ++ + + Y DGSV +I ++P+
Sbjct: 787 QSIEPAYQNLYVKSNMSGDFTVVNAHLVRDLKARGLWDEVMISDLKYFDGSVGEIDRVPD 846
Query: 694 ELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKT 753
+LKA+Y T +EI L+D A R +ID +QSLN+++ P+ KL +L+ HAW RGLKT
Sbjct: 847 DLKALYATAFEIDSAWLIDAAARRQKWIDQAQSLNLYIANPSGKKLDALYRHAWKRGLKT 906
Query: 754 GMYYLRSRAAADAIKFTV 771
YYLRSR+A K T+
Sbjct: 907 -TYYLRSRSATHVEKSTL 923
>gi|269839639|ref|YP_003324331.1| ribonucleoside-diphosphate reductase subunit alpha [Thermobaculum
terrenum ATCC BAA-798]
gi|269791369|gb|ACZ43509.1| ribonucleoside-diphosphate reductase, alpha subunit [Thermobaculum
terrenum ATCC BAA-798]
Length = 819
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 322/836 (38%), Positives = 475/836 (56%), Gaps = 64/836 (7%)
Query: 3 VVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAE 62
VV +G + D++ L+ GL CDP ++ +V +Y VT Q+
Sbjct: 15 VVSPEGGLVPLDPDRVRRHLQHACRGLP--ECDPDELANEVVRSLYDRVTPEQIRSAMIL 72
Query: 63 TAAAMTTNHPDYASLAARIVVSNLHKNT------KKSFSETIKDMYNHYNERSGLKAPLI 116
A A P Y +A+R+++ +++ + + + T ++M+ Y + A +
Sbjct: 73 AARARIERDPAYDKVASRLMLEQIYQESWGWVPSEAELAATYREMFPRY-----VHACIS 127
Query: 117 ADDVYDIIMK-NAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVA 175
A + + + + + ARL S + +RD Y G +TL YLL V+G+ +E PQ+ MRVA
Sbjct: 128 AGRLSEELARFDLARLASALRPERDEKLRYIGLQTLYDRYLLDVEGRRLEAPQYFWMRVA 187
Query: 176 VGI--HKDDIDS-AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIY 232
+G+ +DD ++ A + Y ++S F A+PTLFN+GTP QLSSC+L ++DD +E I+
Sbjct: 188 MGLALREDDPNARAAQFYDLLSSLRFVSATPTLFNSGTPHPQLSSCYLSTVEDD-LEHIF 246
Query: 233 DTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGK 292
+ + A +SK AGG+G +RATG+ IRGT+G S G++P L++ NDTA V+QGG K
Sbjct: 247 KVIGDNAKLSKWAGGLGNDWTRVRATGALIRGTHGKSQGVIPFLKIVNDTAVAVNQGG-K 305
Query: 293 RKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFC 352
RKGA YLEPWH D EFL+LRKN G E R D+ A WVPDLFM RVQ G W+LF
Sbjct: 306 RKGAVCCYLEPWHLDFEEFLELRKNTGDERRRTHDMHTASWVPDLFMRRVQEGGTWTLFS 365
Query: 353 PNEAPGLADCWGTEFERLYTKYEK---EGKAK--KVVQAQNLWFEILKSQIETGTPYMLF 407
PNE P L + +G FER Y +YE+ EGK + K V A+ LW ++L ETG P++ F
Sbjct: 366 PNEVPDLHELYGRAFERRYVEYERMAEEGKLRQHKRVDAKMLWRKMLSMLWETGHPWIAF 425
Query: 408 KDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPS 467
KD N +S Q ++G I SSNLCTE++ TS ETAVCNL SI L ++ G+
Sbjct: 426 KDPSNIRSAQDHVGVIHSSNLCTEILLPTSREETAVCNLGSINLVEHLSGDGL------- 478
Query: 468 KLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
D KLAE L+ +ID+N+YP ARRSNLRHRPIG+G+ G
Sbjct: 479 -------------DEAKLAETVRTAVRMLDNVIDINFYPTPEARRSNLRHRPIGLGIMGF 525
Query: 528 ADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQP 587
D + L +P+ S +A + + E I +HA+ SSE+AA G Y +Y GS S+G+L
Sbjct: 526 HDALLALRIPYASPQAVEFSDQTMELISWHAIMASSELAAERGRYPSYQGSKWSRGLLPI 585
Query: 588 DM-----------WGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
D ++ + R DWG +R+ +++ GVRNS ++A PTA+ S I G ++
Sbjct: 586 DTIELLERERGGDLEMDRTARLDWGPVREAVARWGVRNSQIMAIAPTATISNIAGVSQSI 645
Query: 637 EPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELK 696
EP+ N++ + LSG+F +VN +L+ DL +GLWS + ++I Y DGS+ I +IP+E+K
Sbjct: 646 EPHYRNLFVKSNLSGDFTIVNPYLVEDLKRLGLWSQEMLDRIKYYDGSILPIEEIPDEVK 705
Query: 697 AIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMY 756
+Y T EI L++ A R ++D QSLNI++ +P+ KL ++F AW +GLKT Y
Sbjct: 706 HLYLTAHEIDPLWLIECASRRQKWVDMGQSLNIYVAEPSGKKLHEIYFAAWRKGLKT-TY 764
Query: 757 YLRSRAAADAIKFTVDTSVLKENPKVTDDDDAKMAQMV------CSLTNREECMAC 806
YLR+ A + K ++D + P+ A + C L E+C AC
Sbjct: 765 YLRAVGATNVEKASMDINRFGVQPRWMRSRSASSRVRIVREGSTCQLG--EDCEAC 818
>gi|161525958|ref|YP_001580970.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
multivorans ATCC 17616]
gi|221202416|ref|ZP_03575448.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
multivorans CGD2M]
gi|221208124|ref|ZP_03581129.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
multivorans CGD2]
gi|160343387|gb|ABX16473.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
multivorans ATCC 17616]
gi|221172027|gb|EEE04469.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
multivorans CGD2]
gi|221177693|gb|EEE10108.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
multivorans CGD2M]
Length = 995
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 319/773 (41%), Positives = 438/773 (56%), Gaps = 53/773 (6%)
Query: 35 DPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSF 94
DP++ + +Y GV SQ+ + A A M P Y+ + ARI+ LH ++
Sbjct: 189 DPIVA--ETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARIL---LHTIRREIL 243
Query: 95 SETI--KDMYNHYNE------RSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYF 146
E + DM Y E + G++A L+ D + +K RL + RD + Y
Sbjct: 244 GEEVVQADMSTRYAEYFPQFLKRGVEAGLLDDKLLQFDLK---RLGEALDASRDLQFGYL 300
Query: 147 GFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASP 203
G +TL Y L V G +E PQ MRVA+G+ ++ID AI+ Y+++S F ++P
Sbjct: 301 GLQTLYDRYFLHVDGTRIEMPQAFFMRVAMGLSLNEIDREARAIEFYNVLSSFDFMSSTP 360
Query: 204 TLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT R+QLSSC+L + DD ++GIY+ LKE A++SK AGG+G +RA GS+I+
Sbjct: 361 TLFNSGTHRSQLSSCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIK 419
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEH 323
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G +
Sbjct: 420 GTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRR 478
Query: 324 RARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EG 378
R D+ A W+PDLFM+RV G W+LF P+ P L D +G +FE YT YE+ E
Sbjct: 479 RTHDMNTANWIPDLFMKRVMEGGEWTLFSPSTCPDLHDKFGADFEAAYTAYEEKVARGEI 538
Query: 379 KAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSP 438
K K + AQ LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ TS
Sbjct: 539 KLFKKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSD 598
Query: 439 TETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNK 498
TE AVCNL S+ L + + P D +KL + L+
Sbjct: 599 TEIAVCNLGSVNLVAH-------LVKQPDGTYA--------LDHDKLKRTISVAMRMLDN 643
Query: 499 IIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHA 558
+ID+NYY V AR SNL+HRP+G+G+ G D LL P+ S A + E + Y+A
Sbjct: 644 VIDINYYAVPKARNSNLKHRPVGLGIMGFQDCLHLLRTPYASEAAVEFADRSMEAVCYYA 703
Query: 559 LRTSSEIAAREGPYETYHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRDMI 607
S+E+A G Y +Y GS +GIL D V+ S+ DW LR I
Sbjct: 704 YYASTELAEERGRYSSYRGSLWDRGILPQDTLKLLAEARGGYVEVDSSESLDWATLRARI 763
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEM 667
+ +G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L+ DL E
Sbjct: 764 ATHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKER 823
Query: 668 GLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSL 727
GLW ++ + Y DG + +I +IP +L+AIY T +E+ K LV+ A R +ID +QSL
Sbjct: 824 GLWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQSL 883
Query: 728 NIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
NI+M + KL ++ AWLRGLKT YYLR+ AA K TV L P
Sbjct: 884 NIYMAGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 935
>gi|189349323|ref|YP_001944951.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
multivorans ATCC 17616]
gi|189333345|dbj|BAG42415.1| ribonucleoside-diphosphate reductase alpha chain [Burkholderia
multivorans ATCC 17616]
Length = 997
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 319/773 (41%), Positives = 438/773 (56%), Gaps = 53/773 (6%)
Query: 35 DPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSF 94
DP++ + +Y GV SQ+ + A A M P Y+ + ARI+ LH ++
Sbjct: 191 DPIVA--ETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARIL---LHTIRREIL 245
Query: 95 SETI--KDMYNHYNE------RSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYF 146
E + DM Y E + G++A L+ D + +K RL + RD + Y
Sbjct: 246 GEEVVQADMSTRYAEYFPQFLKRGVEAGLLDDKLLQFDLK---RLGEALDASRDLQFGYL 302
Query: 147 GFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASP 203
G +TL Y L V G +E PQ MRVA+G+ ++ID AI+ Y+++S F ++P
Sbjct: 303 GLQTLYDRYFLHVDGTRIEMPQAFFMRVAMGLSLNEIDREARAIEFYNVLSSFDFMSSTP 362
Query: 204 TLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT R+QLSSC+L + DD ++GIY+ LKE A++SK AGG+G +RA GS+I+
Sbjct: 363 TLFNSGTHRSQLSSCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIK 421
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEH 323
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G +
Sbjct: 422 GTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRR 480
Query: 324 RARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EG 378
R D+ A W+PDLFM+RV G W+LF P+ P L D +G +FE YT YE+ E
Sbjct: 481 RTHDMNTANWIPDLFMKRVMEGGEWTLFSPSTCPDLHDKFGADFEAAYTAYEEKVARGEI 540
Query: 379 KAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSP 438
K K + AQ LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ TS
Sbjct: 541 KLFKKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSD 600
Query: 439 TETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNK 498
TE AVCNL S+ L + + P D +KL + L+
Sbjct: 601 TEIAVCNLGSVNLVAH-------LVKQPDGTYA--------LDHDKLKRTISVAMRMLDN 645
Query: 499 IIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHA 558
+ID+NYY V AR SNL+HRP+G+G+ G D LL P+ S A + E + Y+A
Sbjct: 646 VIDINYYAVPKARNSNLKHRPVGLGIMGFQDCLHLLRTPYASEAAVEFADRSMEAVCYYA 705
Query: 559 LRTSSEIAAREGPYETYHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRDMI 607
S+E+A G Y +Y GS +GIL D V+ S+ DW LR I
Sbjct: 706 YYASTELAEERGRYSSYRGSLWDRGILPQDTLKLLAEARGGYVEVDSSESLDWATLRARI 765
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEM 667
+ +G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L+ DL E
Sbjct: 766 ATHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKER 825
Query: 668 GLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSL 727
GLW ++ + Y DG + +I +IP +L+AIY T +E+ K LV+ A R +ID +QSL
Sbjct: 826 GLWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQSL 885
Query: 728 NIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
NI+M + KL ++ AWLRGLKT YYLR+ AA K TV L P
Sbjct: 886 NIYMAGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 937
>gi|221213240|ref|ZP_03586215.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
multivorans CGD1]
gi|221166692|gb|EED99163.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
multivorans CGD1]
Length = 995
Score = 554 bits (1427), Expect = e-155, Method: Compositional matrix adjust.
Identities = 319/773 (41%), Positives = 438/773 (56%), Gaps = 53/773 (6%)
Query: 35 DPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSF 94
DP++ + +Y GV SQ+ + A A M P Y+ + ARI+ LH ++
Sbjct: 189 DPIVA--ETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARIL---LHTIRREIL 243
Query: 95 SETI--KDMYNHYNE------RSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYF 146
E + DM Y E + G++A L+ D + +K RL + RD + Y
Sbjct: 244 GEEVVQADMSTRYAEYFPQFLKRGVEAGLLDDKLLQFDLK---RLGEALDASRDLQFGYL 300
Query: 147 GFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASP 203
G +TL Y L V G +E PQ MRVA+G+ ++ID AI+ Y+++S F ++P
Sbjct: 301 GLQTLYDRYFLHVDGTRIEMPQAFFMRVAMGLSLNEIDREARAIEFYNVLSSFDFMSSTP 360
Query: 204 TLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT R+QLSSC+L + DD ++GIY+ LKE A++SK AGG+G +RA GS+I+
Sbjct: 361 TLFNSGTHRSQLSSCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIK 419
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEH 323
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G +
Sbjct: 420 GTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRR 478
Query: 324 RARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EG 378
R D+ A W+PDLFM+RV G W+LF P+ P L D +G +FE YT YE+ E
Sbjct: 479 RTHDMNTANWIPDLFMKRVMEGGEWTLFSPSTCPDLHDKFGADFEAAYTAYEEKVARGEI 538
Query: 379 KAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSP 438
K K + AQ LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ TS
Sbjct: 539 KLFKKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSD 598
Query: 439 TETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNK 498
TE AVCNL S+ L + + P D +KL + L+
Sbjct: 599 TEIAVCNLGSVNLVAH-------LVKQPDGTYA--------LDHDKLKRTISVAMRMLDN 643
Query: 499 IIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHA 558
+ID+NYY V AR SNL+HRP+G+G+ G D LL P+ S A + E + Y+A
Sbjct: 644 VIDINYYAVPKARNSNLKHRPVGLGIMGFQDCLHLLRTPYASEAAVEFADRSMEAVCYYA 703
Query: 559 LRTSSEIAAREGPYETYHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRDMI 607
S+E+A G Y +Y GS +GIL D V+ S+ DW LR I
Sbjct: 704 YYASTELAEERGRYSSYRGSLWDRGILPQDTLKLLAEARGGYVEVDSSESLDWATLRARI 763
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEM 667
+ +G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L+ DL E
Sbjct: 764 ATHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKER 823
Query: 668 GLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSL 727
GLW ++ + Y DG + +I +IP +L+AIY T +E+ K LV+ A R +ID +QSL
Sbjct: 824 GLWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQSL 883
Query: 728 NIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
NI+M + KL ++ AWLRGLKT YYLR+ AA K TV L P
Sbjct: 884 NIYMAGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 935
>gi|107021672|ref|YP_619999.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
cenocepacia AU 1054]
gi|116688618|ref|YP_834241.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
cenocepacia HI2424]
gi|170731917|ref|YP_001763864.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
cenocepacia MC0-3]
gi|105891861|gb|ABF75026.1| Ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
cenocepacia AU 1054]
gi|116646707|gb|ABK07348.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
cenocepacia HI2424]
gi|169815159|gb|ACA89742.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
cenocepacia MC0-3]
Length = 1001
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 316/773 (40%), Positives = 440/773 (56%), Gaps = 53/773 (6%)
Query: 35 DPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSF 94
DP++ + +Y GV SQ+ + A A M P Y+ + ARI+ LH ++
Sbjct: 190 DPIVA--ETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARIL---LHTIRREIL 244
Query: 95 SETI--KDMYNHYNE------RSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYF 146
E + +M Y E + G+ A L+ D + +K RL + +RD + Y
Sbjct: 245 GEEVVQAEMSTRYAEYFPQFLKRGVDAGLLDDKLLQFDLK---RLGEALDANRDLQFGYL 301
Query: 147 GFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASP 203
G +TL Y L V+G +E PQ MRVA+G+ ++ID AI+ Y+++S F ++P
Sbjct: 302 GLQTLYDRYFLHVEGTRIEMPQAFFMRVAMGLSLNEIDRETRAIEFYNVLSSFDFMSSTP 361
Query: 204 TLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT R+QLSSC+L + DD ++GIY+ LKE A++SK AGG+G +RA GS+I+
Sbjct: 362 TLFNSGTHRSQLSSCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIK 420
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEH 323
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G +
Sbjct: 421 GTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRR 479
Query: 324 RARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EG 378
R D+ A W+PDLFM+RV G W+LF P+ P L D +G +FE+ YT YE E
Sbjct: 480 RTHDMNTANWIPDLFMKRVMEGGDWTLFSPSTCPDLHDKFGADFEKAYTAYEDKVARGEI 539
Query: 379 KAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSP 438
K K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ TS
Sbjct: 540 KLFKKIPAAQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSD 599
Query: 439 TETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNK 498
TE AVCNL S+ L ++ + + + D +KL + L+
Sbjct: 600 TEIAVCNLGSVNLVAHLVK---------------QADGSYALDHDKLKRTISVAMRMLDN 644
Query: 499 IIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHA 558
+ID+NYY V AR SNL+HRP+G+G+ G D LL P+ S EA + E + Y+A
Sbjct: 645 VIDINYYAVPKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASQEAVEFADRSMEAVCYYA 704
Query: 559 LRTSSEIAAREGPYETYHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRDMI 607
S+E+A G Y +Y GS +GIL D V+ S+ DW LR I
Sbjct: 705 YHASTELAEERGRYSSYRGSLWDRGILPQDTLKLLAEARGGYVEVDTSESLDWTALRARI 764
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEM 667
+ +G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L+ DL E
Sbjct: 765 ATHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKER 824
Query: 668 GLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSL 727
GLW ++ + Y DG + +I +IP +L+AIY T +E+ LV+ A R +ID +QSL
Sbjct: 825 GLWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPTWLVEAASRRQKWIDQAQSL 884
Query: 728 NIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
NI+M + KL ++ AWLRGLKT YYLR+ AA K TV L P
Sbjct: 885 NIYMGGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 936
>gi|271967541|ref|YP_003341737.1| ribonucleoside-diphosphate reductase [Streptosporangium roseum DSM
43021]
gi|270510716|gb|ACZ88994.1| Ribonucleoside-diphosphate reductase [Streptosporangium roseum DSM
43021]
Length = 731
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 311/756 (41%), Positives = 442/756 (58%), Gaps = 54/756 (7%)
Query: 59 LAAETAAAMTTNHPD----YASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAP 114
LA E AAA P+ A L A ++ + ++FSE++ + A
Sbjct: 21 LAIEEAAARVITDPENSRIAAGLLAELIADEAAGHGVRAFSESVAATH---------AAG 71
Query: 115 LIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLK--VQGKVVERPQHMLM 172
L+ D + + +AA LD+ + D D ++YFG +T+ YLL+ +V+ERPQH +
Sbjct: 72 LVQDGLAAFVAAHAAELDALVAQDADDRFEYFGLRTVYDRYLLRHPRTRQVLERPQHFFL 131
Query: 173 RVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIY 232
RVA G+ + ++ A + Y +MS + +SPTLFN+G+ R QLSSCFL+ D +E IY
Sbjct: 132 RVACGL-SETVEEAAELYALMSTLSYLPSSPTLFNSGSRRPQLSSCFLLDSPRDELEAIY 190
Query: 233 DTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGK 292
+ + A +SK AGGIG++ +R+ GS IRGTNG SNGIVP LR + + V+QGG +
Sbjct: 191 ERYGQVARLSKYAGGIGIAWTRVRSRGSLIRGTNGHSNGIVPWLRTLDSSVAAVNQGG-R 249
Query: 293 RKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFC 352
RKGA VYLE WHAD+ EFL+LR N G+E R +L A W+PD FM RV+++G+WSLF
Sbjct: 250 RKGAACVYLESWHADVEEFLELRDNTGEEARRTHNLNLANWIPDEFMRRVEADGVWSLFD 309
Query: 353 PNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCN 412
P E P L D +G FE Y E EG+ K + A++L+ ++++ +TG +M FKD N
Sbjct: 310 PKEVPHLTDLYGAAFEEAYRAAEAEGRYVKQIPARSLYGRMMRTLAQTGNGWMTFKDAAN 369
Query: 413 KKSNQ--QNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLV 470
+ SNQ + I SNLCTE+++ T+ ETAVCNL SI L ++
Sbjct: 370 RTSNQTARPENVIHLSNLCTEILEVTNDAETAVCNLGSINLAAHL--------------- 414
Query: 471 GSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADT 530
R D+ +L L++ ID+ +YP A +N + RPIG+GV GLAD
Sbjct: 415 -----DGRDVDWTRLRRTVRTAVRFLDRTIDLGFYPTPEAGTANRKWRPIGLGVMGLADV 469
Query: 531 FILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMW 590
L +PFDS +A +L+ I E I A TSS++A G + +Y + + G+L PD +
Sbjct: 470 LFALRLPFDSPQALELSTRISEEIALAAYATSSDLAVERGRHPSYDDTRAAAGVLHPDHY 529
Query: 591 GVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLS 650
G S +W LRD I++ G+RNSL++A PTA+ + I G EC EP SNI+ R LS
Sbjct: 530 GAARSP--EWAALRDRIAETGLRNSLMIAIAPTATIASIAGCYECIEPQVSNIFKRETLS 587
Query: 651 GEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTL 710
GEF+ VN++L+ DL GLW+P I++ I DGSVQ +P +PE+LK++Y+T WE+ QK L
Sbjct: 588 GEFLQVNRYLVRDLQARGLWTPQIRDAIKRADGSVQDVPGMPEDLKSLYRTAWELPQKAL 647
Query: 711 VDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFT 770
+D+A R YID SQSLN+ M P GKL+S++ +AW GLKT YYLRSR A + T
Sbjct: 648 IDLAAARTPYIDQSQSLNLFMATPTIGKLSSMYAYAWKSGLKT-TYYLRSRPATRIAQTT 706
Query: 771 VDTSVLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
V +V +P+ + CSL N E C AC
Sbjct: 707 VAQAV--PDPEA----------VACSLENPEYCDAC 730
>gi|373448933|gb|AEY74312.1| ribonucleotide reductase large subunit [Vaccinia virus]
Length = 383
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 251/383 (65%), Positives = 313/383 (81%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
M+V+KR+G +E V FDKIT+R++KL YGL+ +H DP+ ++ KV G+Y GVTT +LD LA
Sbjct: 1 MFVIKRNGYKENVMFDKITSRIRKLCYGLNTDHIDPIKIAMKVIQGIYNGVTTVELDTLA 60
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
AE AA TT HPDYA LAARI VSNLHK TKK FSE ++D++N+ N ++G +P+I+
Sbjct: 61 AEIAATCTTQHPDYAILAARIAVSNLHKETKKLFSEVMEDLFNYVNPKNGKHSPIISSIT 120
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
DI+ K +L+S IIY+RDF Y+YFGFKTLE+SYLLK+ K+VERPQHMLMRVAVGIH+
Sbjct: 121 MDIVNKYKDKLNSVIIYERDFSYNYFGFKTLEKSYLLKINNKIVERPQHMLMRVAVGIHQ 180
Query: 181 DDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAI 240
DIDSAI+TY+++S++WFTHASPTLFNAGT R Q+SSCFL+ M DDSIEGIYDTLK CA+
Sbjct: 181 WDIDSAIETYNLLSEKWFTHASPTLFNAGTSRHQMSSCFLLNMIDDSIEGIYDTLKRCAL 240
Query: 241 ISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVY 300
ISK AGGIG+S+ NIRA+GSYI GTNG SNGI+PMLRV+N+TARY+DQGG KR G A+Y
Sbjct: 241 ISKMAGGIGLSISNIRASGSYISGTNGISNGIIPMLRVYNNTARYIDQGGNKRPGVMAIY 300
Query: 301 LEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLA 360
LEPWH+DI FLDL+KN G EEHR RDLF ALW+PDLFM+RV+ +G WSL C +E GL
Sbjct: 301 LEPWHSDIMAFLDLKKNTGNEEHRTRDLFIALWIPDLFMKRVKDDGEWSLMCLDECSGLN 360
Query: 361 DCWGTEFERLYTKYEKEGKAKKV 383
+ WG EFERLYT+YE+E + K +
Sbjct: 361 NVWGDEFERLYTQYEREKRYKTI 383
>gi|167580511|ref|ZP_02373385.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
thailandensis TXDOH]
Length = 950
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 324/804 (40%), Positives = 447/804 (55%), Gaps = 52/804 (6%)
Query: 4 VKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAET 63
V +G A+ + + A + GL + P + + +Y GV +Q+ + A
Sbjct: 157 VTDNGVMRALDLNALRALIVSACEGLG-DAVSPEPIVAETVKNLYDGVPMTQVYDSAILA 215
Query: 64 AAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETI--KDMYNHYNE------RSGLKAPL 115
A M P Y+ + ARI+ LH ++ E + +M Y E + G++A L
Sbjct: 216 ARTMIEKDPAYSQVTARIL---LHTIRREILGEEVTQAEMSTRYAEYFPQFLKRGVEAEL 272
Query: 116 IADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVA 175
+ D + +K RL + RD + Y G +TL Y L V G +E PQ MRVA
Sbjct: 273 LDDKLLQFDLK---RLGDALDASRDLQFGYLGLQTLYDRYFLHVDGTRIEMPQAFFMRVA 329
Query: 176 VGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIY 232
+G+ ++ID AI+ Y+++S F ++PTLFN+GT R+QLSSC+L + DD ++GIY
Sbjct: 330 MGLALNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTVADD-LDGIY 388
Query: 233 DTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGK 292
+ LK+ A++SK AGG+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG K
Sbjct: 389 EALKDNALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-K 447
Query: 293 RKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFC 352
RKGA YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV W+LF
Sbjct: 448 RKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGADWTLFS 507
Query: 353 PNEAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQIETGTPYMLF 407
P+ P L D +G EFE Y YE+ E K K + AQ LW ++L ETG P++ F
Sbjct: 508 PSTCPDLHDKFGAEFEAAYVGYEEKVARGEIKLYKKIPAQQLWRKMLGMLFETGHPWITF 567
Query: 408 KDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPS 467
KD CN +S QQ++G + SSNLCTE+ TS TE AVCNL S+ L +H +
Sbjct: 568 KDPCNVRSPQQHVGVVHSSNLCTEITLNTSDTEIAVCNLGSVNLV-----------AHLA 616
Query: 468 KLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
K + + D EKL + L+ +ID+NYY V AR SNL+HRP+G+G+ G
Sbjct: 617 K----QADGSYALDEEKLKRTVSVAMRMLDNVIDINYYAVAKARNSNLKHRPVGLGIMGF 672
Query: 528 ADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQP 587
D LL PF S EA + E + Y+A S+E+A G Y +Y GS +GIL
Sbjct: 673 QDCLHLLRTPFASDEAVEFADRSMEAVCYYAYWASTELAEERGRYSSYRGSLWDRGILPQ 732
Query: 588 DMWG-----------VNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
D V+ S DW LR I G+RNS VA PTA+ S I+G + C
Sbjct: 733 DTLKLLTEARGGYVEVDTSATLDWPALRARIDSFGMRNSNCVAIAPTATISNIIGVSACI 792
Query: 637 EPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELK 696
EP N+Y + LSGEF VVN++L+ DL E GLW ++ + Y DG + +I +IP +L+
Sbjct: 793 EPTFQNLYVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADLR 852
Query: 697 AIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMY 756
AIY T +E+ K LV+ A R +ID +QSLNI+M + KL ++ AWLRGLKT Y
Sbjct: 853 AIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDEVYKLAWLRGLKT-TY 911
Query: 757 YLRSRAAADAIKFTVDTSVLKENP 780
YLR+ AA K TV L P
Sbjct: 912 YLRTMAATHVEKSTVAHGALNAVP 935
>gi|186477387|ref|YP_001858857.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
phymatum STM815]
gi|184193846|gb|ACC71811.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
phymatum STM815]
Length = 997
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 314/775 (40%), Positives = 440/775 (56%), Gaps = 53/775 (6%)
Query: 33 HCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKK 92
+ +P++ + +Y GV SQ+ + A A M P Y+ + +RI+ LH ++
Sbjct: 183 NAEPIVA--ETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTSRIL---LHTIRRE 237
Query: 93 SFSETI--KDMYNHYNE------RSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYD 144
E + +M Y E + G+ A L+ D + +K RL + + +RD +
Sbjct: 238 ILEEEVTQAEMAGRYAEYFPLFIKRGVNAELLDDKLLQFDLK---RLGAALDANRDLQFG 294
Query: 145 YFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHA 201
Y G +TL Y L + G +E PQ MRVA+G+ ++ID AI+ Y+++S F +
Sbjct: 295 YLGLQTLYDRYFLHIDGTRIEMPQAFFMRVAMGLSLNEIDREARAIEFYNVLSSFDFMSS 354
Query: 202 SPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSY 261
+PTLFN+GT R+QLSSC+L + DD ++GIY+ LKE A++SK AGG+G +RA GS+
Sbjct: 355 TPTLFNSGTRRSQLSSCYLTTV-DDDLDGIYEALKENALLSKFAGGLGNDWTRVRALGSH 413
Query: 262 IRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKE 321
I+GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G +
Sbjct: 414 IKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDD 472
Query: 322 EHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK----- 376
R D+ A W+PDLFM+RV G W+LF P+ P L D +G EFE YT YE
Sbjct: 473 RRRTHDMNTANWIPDLFMKRVLEGGDWTLFSPSTCPDLHDKFGAEFEAAYTAYEDKVARG 532
Query: 377 EGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYT 436
E K K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ T
Sbjct: 533 EIKLFKKIPAAQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNT 592
Query: 437 SPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENL 496
S TE AVCNL S+ L +++E + D +KL + L
Sbjct: 593 SDTEIAVCNLGSVNLVAHLKE---------------QADGTLALDHDKLKRTISVAMRML 637
Query: 497 NKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYY 556
+ +ID+NYY V AR SNL+HRP+G+G+ G D +L P+ S EA + E + Y
Sbjct: 638 DNVIDINYYAVAKARNSNLKHRPVGMGIMGFQDCLHVLRTPYASQEAVEFADRSMEAVCY 697
Query: 557 HALRTSSEIAAREGPYETYHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRD 605
+A S+E+A G Y TY GS +GIL D V+ S+ DW LR
Sbjct: 698 YAYWASTELAEERGRYSTYRGSLWDRGILPQDTLKLLADARGGYVEVDSSESMDWASLRS 757
Query: 606 MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLT 665
I+ +G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L+ DL
Sbjct: 758 RIATHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLK 817
Query: 666 EMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQ 725
GLW ++ + Y DGS+ +I ++P +L+AIY T +E+ LV+ A R +ID +Q
Sbjct: 818 ARGLWDEVMVADLKYFDGSLSRIDRVPADLRAIYATAFEVDATWLVEAASRRQKWIDQAQ 877
Query: 726 SLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
SLNI+M + KL ++ AWLRGLKT YYLR+ AA K TV L P
Sbjct: 878 SLNIYMAGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 931
>gi|34497742|ref|NP_901957.1| ribonucleotide-diphosphate reductase subunit alpha [Chromobacterium
violaceum ATCC 12472]
gi|34103598|gb|AAQ59959.1| ribonucleoside-diphosphate reductase system [Chromobacterium
violaceum ATCC 12472]
Length = 972
Score = 553 bits (1424), Expect = e-154, Method: Compositional matrix adjust.
Identities = 319/836 (38%), Positives = 469/836 (56%), Gaps = 61/836 (7%)
Query: 3 VVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAE 62
V+++DG++ + ++ A ++ S L+ D +L + +Y GV ++ + A
Sbjct: 165 VLRKDGRKLPLDVPRLRASIEAASKNLAGIDVDAILA--ETLKNIYDGVPEEEVGKSAIL 222
Query: 63 TAAAMTTNHPDYASLAARIVVSNLHKNT---KKSFSETIKDMYNHYNE--RSGLKAPLIA 117
A +M P Y + AR+++ N+ S E K ++ + + G+ A L+
Sbjct: 223 AARSMIEQDPAYDYVTARLLMGNIRLEILGEAVSQDEMGKQYAPYFADYIKKGIAAELLD 282
Query: 118 DDVYDIIMKN-AARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAV 176
+ + + +K A LD+E RD + Y G +TL Y L V G +E PQ MRVA+
Sbjct: 283 EKLAEYDLKKLGAALDAE----RDLQFGYLGLQTLYDRYFLHVDGTRIEMPQAFYMRVAM 338
Query: 177 GIHKDDI---DSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYD 233
G+ +++ D AI+ Y ++S F ++PTLFN+GT R+QLSSC+L + DD ++GIY+
Sbjct: 339 GLALNEVNREDRAIEFYKVLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTIADD-LDGIYE 397
Query: 234 TLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKR 293
+KE A++SK AGG+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG KR
Sbjct: 398 GIKENALLSKFAGGLGNDWTPVRAMGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KR 456
Query: 294 KGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCP 353
KGA YLE WHADI EFL+LRKN G + R D+ A W+PDLFM+RV G WSLF P
Sbjct: 457 KGAVCAYLETWHADIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGGDWSLFSP 516
Query: 354 NEAPGLADCWGTEFERLYTKYEKEG-----KAKKVVQAQNLWFEILKSQIETGTPYMLFK 408
+E P L D +G FE+ YT YE G K K + A +LW ++L ETG P++ FK
Sbjct: 517 SETPDLHDLYGQAFEKAYTAYEARGARGELKVYKRIPALSLWRKMLTMLFETGHPWVTFK 576
Query: 409 DTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSK 468
D CN +S QQ++G + SSNLCTE+ T+ E AVCNL S+ L +++E G
Sbjct: 577 DPCNIRSPQQHMGVVHSSNLCTEITLNTNDDEIAVCNLGSVNLSAHLKEDGS-------- 628
Query: 469 LVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLA 528
D +KL L+ +ID+N+YPV+ AR SNL+HRP+G+G+ G
Sbjct: 629 -----------LDADKLQRTIRTALRMLDNVIDINFYPVKKARNSNLKHRPVGMGIMGFQ 677
Query: 529 DTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPD 588
D + +P+ S A + + E + Y A S+E+A G Y +Y GS +G+L D
Sbjct: 678 DCLHIKRVPYGSNAAVEFADESMEMVAYFAYLASTELAEERGRYPSYSGSLWDRGVLPHD 737
Query: 589 MWG-----------VNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFE 637
V+ ++R DW LR+ I ++G+RNS +A PTA+ + I+G + E
Sbjct: 738 SINLLAAERGGYLEVDRTERMDWNKLRERIKQHGMRNSNCLAIAPTATIANIIGVSASIE 797
Query: 638 PYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKA 697
P N++ + LSGEF V N++L+ DL GLW ++ + Y DGS+ +I ++P ELKA
Sbjct: 798 PTYQNLFVKSNLSGEFTVTNEYLVRDLKAAGLWDEVMVADLKYFDGSLGQIDRVPAELKA 857
Query: 698 IYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYY 757
IY T +E+ K LV+ A R +ID +QSLN++M + KL L+ HAWLRGLKT YY
Sbjct: 858 IYATAFEVDPKWLVEAASRRQKWIDQAQSLNLYMAGASGKKLDELYKHAWLRGLKT-TYY 916
Query: 758 LRSRAAADAIKFT-------VDTSVLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
LR+ AA A K T +S + P D+ CS+ N +C +C
Sbjct: 917 LRTLAATSAEKSTGRGGELNAVSSQAQTAPAAAVDNTPATDAKFCSIDN-PDCESC 971
>gi|167586059|ref|ZP_02378447.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
ubonensis Bu]
Length = 990
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 316/773 (40%), Positives = 438/773 (56%), Gaps = 53/773 (6%)
Query: 35 DPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSF 94
DP++ + +Y GV SQ+ + A A M P Y+ + ARI+ LH ++
Sbjct: 188 DPIVA--ETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARIL---LHTIRREIL 242
Query: 95 SETI--KDMYNHYNE------RSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYF 146
E + +M Y E + G+ A L+ D + +K RL + +RD + Y
Sbjct: 243 GEEVVQAEMSTRYAEYFPQFLKRGVDAGLLDDKLLQFDLK---RLGDALDANRDLQFGYL 299
Query: 147 GFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASP 203
G +TL Y L V G +E PQ MRVA+G+ ++ID AI+ Y+++S F ++P
Sbjct: 300 GLQTLYDRYFLHVDGSRIEMPQAFFMRVAMGLSLNEIDREARAIEFYNVLSSFDFMSSTP 359
Query: 204 TLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT R+QLSSC+L + DD ++GIY+ LKE A++SK AGG+G +RA GS+I+
Sbjct: 360 TLFNSGTHRSQLSSCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIK 418
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEH 323
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G +
Sbjct: 419 GTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRR 477
Query: 324 RARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EG 378
R D+ A W+PDLFM+RV G W+LF P+ P L D +G EFE YT YE E
Sbjct: 478 RTHDMNTANWIPDLFMKRVMEGGDWTLFSPSTCPDLHDKFGAEFETAYTAYEDKVARGEI 537
Query: 379 KAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSP 438
K K + AQ LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ TS
Sbjct: 538 KLFKKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSD 597
Query: 439 TETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNK 498
TE AVCNL S+ L ++ + + + D +KL + L+
Sbjct: 598 TEIAVCNLGSVNLVAHLVK---------------QADGSYALDHDKLKRTVSVAMRMLDN 642
Query: 499 IIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHA 558
+ID+NYY V AR SNL+HRP+G+G+ G D LL P+ S A + E + Y+A
Sbjct: 643 VIDINYYAVPKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASQAAVEFADRSMEAVCYYA 702
Query: 559 LRTSSEIAAREGPYETYHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRDMI 607
S+E+A G Y +Y GS +GIL D V+ S+ DW LR I
Sbjct: 703 YYASTELAEERGRYSSYRGSLWDRGILPQDTLKLLTEARGGYVEVDTSESLDWSELRSRI 762
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEM 667
+ +G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L+ DL E
Sbjct: 763 AAHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKER 822
Query: 668 GLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSL 727
GLW ++ + Y DG + +I ++P +L+AIY T +E+ LV+ A R +ID +QSL
Sbjct: 823 GLWDEVMVADLKYFDGMLSRIDRVPADLRAIYATAFEVDPTWLVEAASRRQKWIDQAQSL 882
Query: 728 NIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
NI+M + KL ++ AWLRGLKT YYLR+ AA K TV L P
Sbjct: 883 NIYMGGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 934
>gi|416907777|ref|ZP_11931087.1| ribonucleotide-diphosphate reductase subunit alpha, partial
[Burkholderia sp. TJI49]
gi|325528899|gb|EGD05935.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
sp. TJI49]
Length = 963
Score = 551 bits (1421), Expect = e-154, Method: Compositional matrix adjust.
Identities = 317/773 (41%), Positives = 438/773 (56%), Gaps = 53/773 (6%)
Query: 35 DPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSF 94
DP++ + +Y GV SQ+ + A A M P Y+ + ARI+ LH ++
Sbjct: 191 DPIVA--ETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARIL---LHTIRREIL 245
Query: 95 SETI--KDMYNHYNE------RSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYF 146
E + +M Y E + G+ A L+ D + +K RL + RD + Y
Sbjct: 246 GEEVVQAEMSTRYAEYFPQFLKRGVDAGLLDDKLLQFDLK---RLGDALDASRDLQFGYL 302
Query: 147 GFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASP 203
G +TL Y L V G +E PQ MRVA+G+ ++ID AI+ Y+++S F ++P
Sbjct: 303 GLQTLYDRYFLHVGGTRIEMPQAFFMRVAMGLSLNEIDRETRAIEFYNVLSSFDFMSSTP 362
Query: 204 TLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT R+QLSSC+L + DD ++GIY+ LKE A++SK AGG+G +RA GS+I+
Sbjct: 363 TLFNSGTHRSQLSSCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIK 421
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEH 323
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G +
Sbjct: 422 GTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRR 480
Query: 324 RARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EG 378
R D+ A W+PDLFM+RV G W+LF P+ P L D +G EFE YT YE+ E
Sbjct: 481 RTHDMNTANWIPDLFMKRVMEGGEWTLFSPSTCPDLHDKFGAEFEAAYTAYEEKVARGEI 540
Query: 379 KAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSP 438
K K + AQ LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ TS
Sbjct: 541 KLFKKIPAQQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTSD 600
Query: 439 TETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNK 498
TE AVCNL S+ L ++ + + + D +KL + L+
Sbjct: 601 TEIAVCNLGSVNLVAHLVK---------------QADGSYALDHDKLKRTISVAMRMLDN 645
Query: 499 IIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHA 558
+ID+NYY V AR SNL+HRP+G+G+ G D LL P+ S A + E + Y+A
Sbjct: 646 VIDINYYAVPKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASEAAVEFADRSMEAVCYYA 705
Query: 559 LRTSSEIAAREGPYETYHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRDMI 607
S+E+A G Y +Y GS +GIL D V+ S+ DW LR I
Sbjct: 706 YYASTELAEERGRYSSYRGSLWDRGILPQDTLKLLAEARGGYVEVDSSESLDWTALRARI 765
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEM 667
+ +G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L+ DL E
Sbjct: 766 AAHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKER 825
Query: 668 GLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSL 727
GLW ++ + Y DG + +I +IP +L+AIY T +E+ LV+ A R +ID +QSL
Sbjct: 826 GLWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPTWLVEAASRRQKWIDQAQSL 885
Query: 728 NIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
NI+M + KL ++ AWLRGLKT YYLR+ AA K TV L P
Sbjct: 886 NIYMGGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 937
>gi|134294682|ref|YP_001118417.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
vietnamiensis G4]
gi|387901271|ref|YP_006331610.1| ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Burkholderia sp. KJ006]
gi|134137839|gb|ABO53582.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
vietnamiensis G4]
gi|387576163|gb|AFJ84879.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Burkholderia sp. KJ006]
Length = 996
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 316/775 (40%), Positives = 439/775 (56%), Gaps = 53/775 (6%)
Query: 33 HCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKK 92
+ DP++ + +Y GV SQ+ + A A M P Y+ + ARI+ LH ++
Sbjct: 188 NADPIVA--ETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARIL---LHTIRRE 242
Query: 93 SFSETI--KDMYNHYNE------RSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYD 144
E + DM Y E + G+ A L+ D + +K RL + +RD +
Sbjct: 243 ILGEEVVQADMSARYAEYFPQFLKRGVDAGLLDDKLLQFDLK---RLGEALDANRDLQFG 299
Query: 145 YFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHA 201
Y G +TL Y L V G +E PQ MRVA+G+ ++ID AI+ Y+++S F +
Sbjct: 300 YLGLQTLYDRYFLHVDGTRIEMPQAFFMRVAMGLSLNEIDRETRAIEFYNVLSSFDFMSS 359
Query: 202 SPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSY 261
+PTLFN+GT R+QLSSC+L + DD ++GIY+ LKE A++SK AGG+G +RA GS+
Sbjct: 360 TPTLFNSGTHRSQLSSCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSH 418
Query: 262 IRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKE 321
I+GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G +
Sbjct: 419 IKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDD 477
Query: 322 EHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK----- 376
R D+ A W+PDLFM+RV W+LF P+ P L D +G +FE+ YT YE
Sbjct: 478 RRRTHDMNTANWIPDLFMKRVMEGSDWTLFSPSTCPDLHDKFGADFEKAYTAYEDKVARG 537
Query: 377 EGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYT 436
E K K + AQ LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ T
Sbjct: 538 EIKLFKKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNT 597
Query: 437 SPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENL 496
S TE AVCNL S+ L ++ + + + D +KL + L
Sbjct: 598 SDTEIAVCNLGSVNLVAHLVK---------------QADGSYALDHDKLKRTISVAMRML 642
Query: 497 NKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYY 556
+ +ID+NYY V AR SNL+HRP+G+G+ G D LL P+ S A + E + Y
Sbjct: 643 DNVIDINYYAVPKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASEAAVEFADRSMEAVCY 702
Query: 557 HALRTSSEIAAREGPYETYHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRD 605
+A S+E+A G Y +Y GS +GIL D V+ S+ DW LR
Sbjct: 703 YAYYASTELAEERGRYSSYRGSLWDRGILPQDTLKLLAEARGGYVEVDTSESLDWSTLRS 762
Query: 606 MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLT 665
I+ +G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L+ DL
Sbjct: 763 RIAAHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLK 822
Query: 666 EMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQ 725
E GLW ++ + Y DG + +I +IP +L+AIY T +E+ LV+ A R +ID +Q
Sbjct: 823 ERGLWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPTWLVEAASRRQKWIDQAQ 882
Query: 726 SLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
SLNI+M + KL ++ AWLRGLKT YYLR+ AA K TV L P
Sbjct: 883 SLNIYMGGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 936
>gi|167920555|ref|ZP_02507646.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei BCC215]
Length = 952
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 323/804 (40%), Positives = 447/804 (55%), Gaps = 52/804 (6%)
Query: 4 VKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAET 63
V +G A+ + + A + GL + P + + +Y GV +Q+ + +
Sbjct: 157 VTDNGVTRALDLNALRALIVSACEGLG-DAVSPEPIVAETVKNLYDGVPMTQVYDSSILA 215
Query: 64 AAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETI--KDMYNHYNE------RSGLKAPL 115
A M P Y+ + ARI+ LH ++ E + +M Y E + G++A L
Sbjct: 216 ARTMIEKDPAYSQVTARIL---LHTIRREILGEEVTQAEMTTRYAEYFPQFLKRGVEAEL 272
Query: 116 IADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVA 175
+ D + +K RL + RD + Y G +TL Y L V G +E PQ MRVA
Sbjct: 273 LDDKLLQFDLK---RLGDALDASRDLQFGYLGLQTLYDRYFLHVDGTRIEMPQAFFMRVA 329
Query: 176 VGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIY 232
+G+ ++ID AI+ Y+++S F ++PTLFN+GT R+QLSSC+L + DD ++GIY
Sbjct: 330 MGLALNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTVADD-LDGIY 388
Query: 233 DTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGK 292
+ LK+ A++SK AGG+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG K
Sbjct: 389 EALKDNALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-K 447
Query: 293 RKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFC 352
RKGA YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV W+LF
Sbjct: 448 RKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGADWTLFS 507
Query: 353 PNEAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQIETGTPYMLF 407
P+ P L D +G EFE Y YE+ E K K + AQ LW ++L ETG P++ F
Sbjct: 508 PSTCPDLHDKFGAEFEAAYVGYEEKVARGEIKLFKKIPAQQLWRKMLGMLFETGHPWITF 567
Query: 408 KDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPS 467
KD CN +S QQ++G + SSNLCTE+ TS TE AVCNL S+ L +H +
Sbjct: 568 KDPCNVRSPQQHVGVVHSSNLCTEITLNTSDTEIAVCNLGSVNLV-----------AHLA 616
Query: 468 KLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
K + + D EKL + L+ +ID+NYY V AR SNL+HRP+G+G+ G
Sbjct: 617 K----QADGSYALDEEKLKRTVSVAMRMLDNVIDINYYAVAKARNSNLKHRPVGLGIMGF 672
Query: 528 ADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQP 587
D LL P+ S EA + E + YHA S+E+A G Y +Y GS +GIL
Sbjct: 673 QDCLHLLRTPYASDEAVEFADRSMEAVCYHAYWASTELAEERGRYSSYRGSLWDRGILPQ 732
Query: 588 DMWG-----------VNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
D V+ S DW LR I G+RNS VA PTA+ S I+G + C
Sbjct: 733 DTLKLLTEARGGYVEVDTSATLDWPALRARIDSFGMRNSNCVAIAPTATISNIIGVSACI 792
Query: 637 EPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELK 696
EP N+Y + LSGEF VVN++L+ DL E GLW ++ + Y DG + +I +IP +L+
Sbjct: 793 EPTFQNLYVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADLR 852
Query: 697 AIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMY 756
AIY T +E+ K LV+ A R +ID +QSLNI+M + KL ++ AWLRGLKT Y
Sbjct: 853 AIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDEVYKLAWLRGLKT-TY 911
Query: 757 YLRSRAAADAIKFTVDTSVLKENP 780
YLR+ AA K TV L P
Sbjct: 912 YLRTMAATHVEKSTVAHGALNAVP 935
>gi|167618619|ref|ZP_02387250.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
thailandensis Bt4]
Length = 953
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 323/804 (40%), Positives = 447/804 (55%), Gaps = 52/804 (6%)
Query: 4 VKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAET 63
V +G A+ + + A + GL + P + + +Y GV +Q+ + A
Sbjct: 157 VTDNGVMRALDLNALRALIVSACEGLG-DAVSPEPIVAETVKNLYDGVPMTQVYDSAILA 215
Query: 64 AAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETI--KDMYNHYNE------RSGLKAPL 115
A M P Y+ + ARI+ LH ++ E + +M Y E + G++A L
Sbjct: 216 ARTMIEKDPAYSQVTARIL---LHTIRREILGEEVTQAEMSTRYAEYFPQFLKRGVEAEL 272
Query: 116 IADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVA 175
+ D + +K RL + RD + Y G +TL Y L V G +E PQ MRVA
Sbjct: 273 LDDKLLQFDLK---RLGDALDASRDLQFGYLGLQTLYDRYFLHVDGTRIEMPQAFFMRVA 329
Query: 176 VGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIY 232
+G+ ++ID AI+ Y+++S F ++PTLFN+GT R+QLSSC+L + DD ++GIY
Sbjct: 330 MGLALNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTVADD-LDGIY 388
Query: 233 DTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGK 292
+ LK+ A++SK AGG+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG K
Sbjct: 389 EALKDNALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-K 447
Query: 293 RKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFC 352
RKGA YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV W+LF
Sbjct: 448 RKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGADWTLFS 507
Query: 353 PNEAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQIETGTPYMLF 407
P+ P L D +G EFE Y YE+ E K K + AQ LW ++L ETG P++ F
Sbjct: 508 PSTCPDLHDKFGAEFEAAYVGYEEKVARGEIKLYKKIPAQQLWRKMLGMLFETGHPWITF 567
Query: 408 KDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPS 467
KD CN +S QQ++G + SSNLCTE+ TS TE AVCNL S+ L +H +
Sbjct: 568 KDPCNVRSPQQHVGVVHSSNLCTEITLNTSDTEIAVCNLGSVNLV-----------AHLA 616
Query: 468 KLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
K + + D EKL + L+ +ID+NYY V AR SNL+HRP+G+G+ G
Sbjct: 617 K----QADGSYALDEEKLKRTVSVAMRMLDNVIDINYYAVAKARNSNLKHRPVGLGIMGF 672
Query: 528 ADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQP 587
D LL P+ S EA + E + Y+A S+E+A G Y +Y GS +GIL
Sbjct: 673 QDCLHLLRTPYASDEAVEFADRSMEAVCYYAYWASTELAEERGRYSSYRGSLWDRGILPQ 732
Query: 588 DMWG-----------VNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
D V+ S DW LR I G+RNS VA PTA+ S I+G + C
Sbjct: 733 DTLKLLTEARGGYVEVDTSATLDWPALRARIDSFGMRNSNCVAIAPTATISNIIGVSACI 792
Query: 637 EPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELK 696
EP N+Y + LSGEF VVN++L+ DL E GLW ++ + Y DG + +I +IP +L+
Sbjct: 793 EPTFQNLYVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADLR 852
Query: 697 AIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMY 756
AIY T +E+ K LV+ A R +ID +QSLNI+M + KL ++ AWLRGLKT Y
Sbjct: 853 AIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDEVYKLAWLRGLKT-TY 911
Query: 757 YLRSRAAADAIKFTVDTSVLKENP 780
YLR+ AA K TV L P
Sbjct: 912 YLRTMAATHVEKSTVAHGALNAVP 935
>gi|254253305|ref|ZP_04946623.1| Ribonucleotide reductase alpha subunit [Burkholderia dolosa AUO158]
gi|124895914|gb|EAY69794.1| Ribonucleotide reductase alpha subunit [Burkholderia dolosa AUO158]
Length = 997
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 321/787 (40%), Positives = 442/787 (56%), Gaps = 58/787 (7%)
Query: 28 GLSIEHCD-------PVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAAR 80
L + CD P + + +Y GV SQ+ + A A M P Y+ + AR
Sbjct: 174 ALIVSACDGLGAAVNPEPIVAETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTAR 233
Query: 81 IVVSNLHKNTKKSFSETI--KDMYNHYNE------RSGLKAPLIADDVYDIIMKNAARLD 132
I+ LH ++ E + +M Y E R G++A L+ D + +K RL
Sbjct: 234 IL---LHTIRREILGEEVVQSEMSTRYAEYFPQFLRRGVEAGLLDDKLLQFDLK---RLG 287
Query: 133 SEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKT 189
+ +RD + Y G +TL Y L V G +E PQ MRVA+G+ ++ID AI+
Sbjct: 288 EALDANRDLQFGYLGLQTLYDRYFLHVDGTRIEMPQAFFMRVAMGLSLNEIDREARAIEF 347
Query: 190 YHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIG 249
Y+++S F ++PTLFN+GT R+QLSSC+L + DD ++GIY+ LKE A++SK AGG+G
Sbjct: 348 YNVLSSFDFMSSTPTLFNSGTHRSQLSSCYLTTVADD-LDGIYEALKENALLSKFAGGLG 406
Query: 250 VSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIF 309
+RA GS+I+GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI
Sbjct: 407 NDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIE 465
Query: 310 EFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFER 369
EFL+LRKN G + R D+ A W+PDLFM+RV W+LF P+ P L D +G EFE
Sbjct: 466 EFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGADWTLFSPSTCPDLHDKFGAEFEA 525
Query: 370 LYTKYEK-----EGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIK 424
YT YE+ E K K + AQ LW ++L ETG P++ FKD CN +S QQ++G +
Sbjct: 526 AYTAYEEKVARGEIKLFKKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVH 585
Query: 425 SSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEK 484
SSNLCTE+ TS TE AVCNL S+ L ++ + P S+ D +K
Sbjct: 586 SSNLCTEITLNTSDTEIAVCNLGSVNLVAHLVKQ--PDGSYA-------------LDHDK 630
Query: 485 LAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQ 544
L + L+ +ID+NYY V AR SNL+HRP+G+G+ G D LL P+ S A
Sbjct: 631 LKRTISVAMRMLDNVIDINYYAVPKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASEAAV 690
Query: 545 QLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWG-----------VN 593
+ E + Y+A S+E+A G Y +Y GS +GIL D V+
Sbjct: 691 EFADRSMEAVCYYAYYASTELAEERGRYSSYRGSLWDRGILPQDTLKLLAEARGGYVEVD 750
Query: 594 PSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEF 653
S+ DW LR I+ +G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF
Sbjct: 751 MSETLDWAALRARIATHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEF 810
Query: 654 VVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDM 713
VVN++L+ DL E GLW ++ + Y DG + +I +IP +L+AIY T +E+ K LV+
Sbjct: 811 TVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPKWLVEA 870
Query: 714 AVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDT 773
A R +ID +QSLNI+M + KL ++ AWLRG KT YYLR+ AA K TV
Sbjct: 871 ASRRQKWIDQAQSLNIYMAGASGKKLDEVYKLAWLRGKKT-TYYLRTMAATHVEKSTVAH 929
Query: 774 SVLKENP 780
L P
Sbjct: 930 GALNAVP 936
>gi|83719828|ref|YP_441700.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
thailandensis E264]
gi|257137869|ref|ZP_05586131.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
thailandensis E264]
gi|83653653|gb|ABC37716.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
thailandensis E264]
Length = 995
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 323/804 (40%), Positives = 447/804 (55%), Gaps = 52/804 (6%)
Query: 4 VKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAET 63
V +G A+ + + A + GL + P + + +Y GV +Q+ + A
Sbjct: 157 VTDNGVMRALDLNALRALIVSACEGLG-DAVSPEPIVAETVKNLYDGVPMTQVYDSAILA 215
Query: 64 AAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETI--KDMYNHYNE------RSGLKAPL 115
A M P Y+ + ARI+ LH ++ E + +M Y E + G++A L
Sbjct: 216 ARTMIEKDPAYSQVTARIL---LHTIRREILGEEVTQAEMSTRYAEYFPQFLKRGVEAEL 272
Query: 116 IADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVA 175
+ D + +K RL + RD + Y G +TL Y L V G +E PQ MRVA
Sbjct: 273 LDDKLLQFDLK---RLGDALDASRDLQFGYLGLQTLYDRYFLHVDGTRIEMPQAFFMRVA 329
Query: 176 VGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIY 232
+G+ ++ID AI+ Y+++S F ++PTLFN+GT R+QLSSC+L + DD ++GIY
Sbjct: 330 MGLALNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTVADD-LDGIY 388
Query: 233 DTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGK 292
+ LK+ A++SK AGG+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG K
Sbjct: 389 EALKDNALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-K 447
Query: 293 RKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFC 352
RKGA YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV W+LF
Sbjct: 448 RKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGADWTLFS 507
Query: 353 PNEAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQIETGTPYMLF 407
P+ P L D +G EFE Y YE+ E K K + AQ LW ++L ETG P++ F
Sbjct: 508 PSTCPDLHDKFGAEFEAAYVGYEEKVARGEIKLYKKIPAQQLWRKMLGMLFETGHPWITF 567
Query: 408 KDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPS 467
KD CN +S QQ++G + SSNLCTE+ TS TE AVCNL S+ L +H +
Sbjct: 568 KDPCNVRSPQQHVGVVHSSNLCTEITLNTSDTEIAVCNLGSVNLV-----------AHLA 616
Query: 468 KLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
K + + D EKL + L+ +ID+NYY V AR SNL+HRP+G+G+ G
Sbjct: 617 K----QADGSYALDEEKLKRTVSVAMRMLDNVIDINYYAVAKARNSNLKHRPVGLGIMGF 672
Query: 528 ADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQP 587
D LL P+ S EA + E + Y+A S+E+A G Y +Y GS +GIL
Sbjct: 673 QDCLHLLRTPYASDEAVEFADRSMEAVCYYAYWASTELAEERGRYSSYRGSLWDRGILPQ 732
Query: 588 DMWG-----------VNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
D V+ S DW LR I G+RNS VA PTA+ S I+G + C
Sbjct: 733 DTLKLLTEARGGYVEVDTSATLDWPALRARIDSFGMRNSNCVAIAPTATISNIIGVSACI 792
Query: 637 EPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELK 696
EP N+Y + LSGEF VVN++L+ DL E GLW ++ + Y DG + +I +IP +L+
Sbjct: 793 EPTFQNLYVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADLR 852
Query: 697 AIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMY 756
AIY T +E+ K LV+ A R +ID +QSLNI+M + KL ++ AWLRGLKT Y
Sbjct: 853 AIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDEVYKLAWLRGLKT-TY 911
Query: 757 YLRSRAAADAIKFTVDTSVLKENP 780
YLR+ AA K TV L P
Sbjct: 912 YLRTMAATHVEKSTVAHGALNAVP 935
>gi|224825452|ref|ZP_03698557.1| ribonucleoside-diphosphate reductase, alpha subunit
[Pseudogulbenkiania ferrooxidans 2002]
gi|224602373|gb|EEG08551.1| ribonucleoside-diphosphate reductase, alpha subunit
[Pseudogulbenkiania ferrooxidans 2002]
Length = 949
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 320/840 (38%), Positives = 475/840 (56%), Gaps = 68/840 (8%)
Query: 3 VVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAE 62
VV+++G + + K+ A ++ GL+ D +L + +Y GV+ ++++ A
Sbjct: 141 VVRKNGAKLPLDIAKLRATIESACVGLAETDVDAILT--ETLKNIYDGVSEEEVNKSAIL 198
Query: 63 TAAAMTTNHPDYASLAARIVVSNLHKNT--KKSFSETIKDMYNHYNERS---GLKAPLIA 117
A AM P Y + AR++++N+ + E + + Y Y ++ G+ A L+
Sbjct: 199 AARAMIEQDPAYDYVTARLLLNNIRLEILGEAVSQEEMGECYVSYFPQAIKKGIAAELLD 258
Query: 118 DDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVG 177
+ + + +K +L + + RD + Y G +TL Y L V G +E PQ MRVA+G
Sbjct: 259 ERLGEYDLK---KLGAALDASRDLQFGYLGLQTLYDRYFLHVNGTRIEMPQAFYMRVAMG 315
Query: 178 IHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
+ ++++ AI+ Y+++S F ++PTLFN+GT R+QLSSC+L + DD ++GIY+
Sbjct: 316 LALNEVEREARAIEFYNVLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTIADD-LDGIYEG 374
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+KE A++SK AGG+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG KRK
Sbjct: 375 IKENALLSKFAGGLGNDWTPVRAMGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRK 433
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA YLE WH DI EF++LRKN G + R D+ A W+PDLFM+RV W+L P+
Sbjct: 434 GAVCAYLETWHLDIEEFVELRKNTGDDRRRTHDMNTANWIPDLFMKRVMDGAEWTLLSPS 493
Query: 355 EAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQIETGTPYMLFKD 409
E P L D G FE+ Y +YE E K K + A +LW ++L ETG P++ FKD
Sbjct: 494 ECPDLHDLVGAAFEKRYQEYEAMAARGEIKVSKRIPALSLWRKMLTMLFETGHPWITFKD 553
Query: 410 TCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKL 469
CN +S Q ++G + SSNLCTE+ T+ E AVCNL S+ L R+++ G
Sbjct: 554 PCNIRSPQGHMGVVHSSNLCTEITLNTNDDEIAVCNLGSVNLARHMQADGT--------- 604
Query: 470 VGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
D KL I L+ +ID+N+YPV+ AR SNL+HRP+G+G+ G D
Sbjct: 605 ----------LDGAKLQRTIRIAMRMLDNVIDINFYPVKKARNSNLKHRPVGMGIMGFQD 654
Query: 530 TFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPD- 588
+ +P+ S EA + + E + YHA SSE+A G Y +Y GS +G+L D
Sbjct: 655 CLHMKRIPYASQEAVEFADESMELVAYHAYWASSELAQERGRYPSYKGSLWDRGVLPHDS 714
Query: 589 ----------MWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
V+ ++R DW LR+ I ++G+RNS +A PTA+ + I+G + EP
Sbjct: 715 INLLAAERGGYLDVDRTERLDWNKLRERIKEHGMRNSNCLAIAPTATIANIIGVSASIEP 774
Query: 639 YTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAI 698
N++ + LSGEF V N+HL+ DL ++GLW ++ + + Y DGS+ +I +IP ELKAI
Sbjct: 775 TYQNLFVKSNLSGEFTVTNEHLVRDLKKLGLWDEVMVSDLKYFDGSLGRIDRIPAELKAI 834
Query: 699 YKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYL 758
Y T +E+ K LVD A R +ID +QSLN++M + KL L+ +AW+RGLKT YYL
Sbjct: 835 YATAFEMDPKWLVDAASRRQKWIDQAQSLNLYMAGASGKKLDELYKYAWVRGLKT-TYYL 893
Query: 759 RSRAAADAIKFT----------VDTSVLKENPKV--TDDDDAKMAQMVCSLTNREECMAC 806
R+ AA A K T T + P+V T DAK CS+ N +C AC
Sbjct: 894 RTLAATSAEKSTGRGGELNAVSATTPAVSAAPEVDNTPATDAKF----CSIDN-PDCEAC 948
>gi|413958909|ref|ZP_11398148.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
sp. SJ98]
gi|413941489|gb|EKS73449.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
sp. SJ98]
Length = 1000
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 313/759 (41%), Positives = 435/759 (57%), Gaps = 47/759 (6%)
Query: 47 VYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKN------TKKSFSETIKD 100
+Y GV SQ+ + A A M P Y+ + ARI++ + + T+ E +
Sbjct: 200 LYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARILLHTIRREILEEEVTQAEMGERYAE 259
Query: 101 MYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQ 160
+ + +R G++A L+ D + +K RL + + +RD + Y G +TL Y L V
Sbjct: 260 YFPQFIKR-GVEAGLLDDKLQQFDLK---RLGAALDQNRDLQFGYLGLQTLYDRYFLHVD 315
Query: 161 GKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSS 217
G +E PQ MRVA+G+ ++ID AI+ Y+++S F ++PTLFN+GT R+QLSS
Sbjct: 316 GTRIELPQAFFMRVAMGLSLNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTHRSQLSS 375
Query: 218 CFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLR 277
C+L + DD ++GIY+ LKE A++SK AGG+G +RA GS+I+GTNG S G+VP L+
Sbjct: 376 CYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLK 434
Query: 278 VFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDL 337
V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R D+ A W+PDL
Sbjct: 435 VVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDL 493
Query: 338 FMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFE 392
FM+RV G W+LF P+ P L D +G +FE+ Y YE+ E K K + A LW +
Sbjct: 494 FMKRVVEGGDWTLFSPSTCPDLHDLFGADFEKAYVAYEEKAARGEIKLFKKLPAAQLWRK 553
Query: 393 ILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALP 452
+L ETG P++ FKD CN +S QQ++G + SSNLCTE+ TS TE AVCNL S+ L
Sbjct: 554 MLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSETEIAVCNLGSVNLV 613
Query: 453 RYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARR 512
+H K + + D KL + L+ +ID+NYY V AR
Sbjct: 614 -----------AHMVK----QADGSYALDHAKLKRTISVAMRMLDNVIDINYYAVPKARN 658
Query: 513 SNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPY 572
SNL+HRP+G+G+ G D LL P+ S EA + E + Y+A S+E+A G Y
Sbjct: 659 SNLKHRPVGMGIMGFQDCLHLLRTPYASGEAVEFADRSMEAVCYYAYYASTELAEERGRY 718
Query: 573 ETYHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRDMISKNGVRNSLLVAPM 621
TY GS +GIL D V+ S+ DW LR IS G+RNS VA
Sbjct: 719 ATYRGSLWDRGILPQDSLKLLAEARGGYVEVDTSETMDWAQLRSRISTYGMRNSNCVAIA 778
Query: 622 PTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYD 681
PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL GLW ++ + + Y
Sbjct: 779 PTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNDYLVRDLKARGLWDEVMVSDLKYF 838
Query: 682 DGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTS 741
DG++ +I +IP +L+AIY T +E+ K LV+ A R +ID +QSLNI+M + KL
Sbjct: 839 DGTLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDE 898
Query: 742 LHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
++ AW+RGLKT YYLR+ AA K TV L P
Sbjct: 899 VYKLAWIRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 936
>gi|347539724|ref|YP_004847149.1| ribonucleoside-diphosphate reductase subunit alpha
[Pseudogulbenkiania sp. NH8B]
gi|345642902|dbj|BAK76735.1| ribonucleoside-diphosphate reductase, alpha subunit
[Pseudogulbenkiania sp. NH8B]
Length = 949
Score = 551 bits (1419), Expect = e-154, Method: Compositional matrix adjust.
Identities = 320/840 (38%), Positives = 475/840 (56%), Gaps = 68/840 (8%)
Query: 3 VVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAE 62
VV+++G + + K+ A ++ GL+ D +L + +Y GV+ ++++ A
Sbjct: 141 VVRKNGAKLPLDIAKLRATIESACTGLAETDVDAILT--ETLKNIYDGVSEEEVNKSAIL 198
Query: 63 TAAAMTTNHPDYASLAARIVVSNLHKNT--KKSFSETIKDMYNHYNERS---GLKAPLIA 117
A AM P Y + AR++++N+ + E + + Y Y ++ G+ A L+
Sbjct: 199 AARAMIEQDPAYDYVTARLLLNNIRLEILGEAVSQEEMGECYVSYFPQAIKKGIAAELLD 258
Query: 118 DDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVG 177
+ + + +K +L + + RD + Y G +TL Y L V G +E PQ MRVA+G
Sbjct: 259 ERLGEYDLK---KLGAALDASRDLQFGYLGLQTLYDRYFLHVNGTRIEMPQAFYMRVAMG 315
Query: 178 IHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
+ ++++ AI+ Y+++S F ++PTLFN+GT R+QLSSC+L + DD ++GIY+
Sbjct: 316 LALNEVEREARAIEFYNVLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTIADD-LDGIYEG 374
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+KE A++SK AGG+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG KRK
Sbjct: 375 IKENALLSKFAGGLGNDWTPVRAMGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRK 433
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA YLE WH DI EF++LRKN G + R D+ A W+PDLFM+RV W+L P+
Sbjct: 434 GAVCAYLETWHLDIEEFVELRKNTGDDRRRTHDMNTANWIPDLFMKRVMDGAEWTLLSPS 493
Query: 355 EAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQIETGTPYMLFKD 409
E P L D G FE+ Y +YE E K K + A +LW ++L ETG P++ FKD
Sbjct: 494 ECPDLHDLVGAAFEKRYQEYEAMAARGEIKVSKRIPALSLWRKMLTMLFETGHPWITFKD 553
Query: 410 TCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKL 469
CN +S Q ++G + SSNLCTE+ T+ E AVCNL S+ L R+++ G
Sbjct: 554 PCNIRSPQGHMGVVHSSNLCTEITLNTNDDEIAVCNLGSVNLARHMQADGT--------- 604
Query: 470 VGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
D KL I L+ +ID+N+YPV+ AR SNL+HRP+G+G+ G D
Sbjct: 605 ----------LDGAKLQRTIRIAMRMLDNVIDINFYPVKKARNSNLKHRPVGMGIMGFQD 654
Query: 530 TFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPD- 588
+ +P+ S EA + + E + YHA SSE+A G Y +Y GS +G+L D
Sbjct: 655 CLHMKRIPYASQEAVEFADESMELVAYHAYWASSELAQERGRYPSYKGSLWDRGVLPHDS 714
Query: 589 ----------MWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
V+ ++R DW LR+ I ++G+RNS +A PTA+ + I+G + EP
Sbjct: 715 INLLAAERGGYLDVDRTERLDWNKLRERIKEHGMRNSNCLAIAPTATIANIIGVSASIEP 774
Query: 639 YTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAI 698
N++ + LSGEF V N+HL+ DL ++GLW ++ + + Y DGS+ +I +IP ELKAI
Sbjct: 775 TYQNLFVKSNLSGEFTVTNEHLVRDLKKLGLWDEVMVSDLKYFDGSLGRIDRIPAELKAI 834
Query: 699 YKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYL 758
Y T +E+ K LVD A R +ID +QSLN++M + KL L+ +AW+RGLKT YYL
Sbjct: 835 YATAFEMDPKWLVDAASRRQKWIDQAQSLNLYMAGASGKKLDELYKYAWVRGLKT-TYYL 893
Query: 759 RSRAAADAIKFT----------VDTSVLKENPKV--TDDDDAKMAQMVCSLTNREECMAC 806
R+ AA A K T T + P+V T DAK CS+ N +C AC
Sbjct: 894 RTLAATSAEKSTGRGGELNAVSATTPAVSAAPEVDNTPATDAKF----CSIDN-PDCEAC 948
>gi|291615086|ref|YP_003525243.1| ribonucleoside-diphosphate reductase, subunit alpha [Sideroxydans
lithotrophicus ES-1]
gi|291585198|gb|ADE12856.1| ribonucleoside-diphosphate reductase, alpha subunit [Sideroxydans
lithotrophicus ES-1]
Length = 946
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 315/792 (39%), Positives = 452/792 (57%), Gaps = 56/792 (7%)
Query: 47 VYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNL------HKNTKKSFSETIKD 100
+Y GV ++ + A +A + P Y+ + AR++++N+ + ++ +E +
Sbjct: 178 LYDGVAVEEVRKCAILSARTLIEQDPAYSFVTARLLLNNICCEILGGQVSQADMAERYAE 237
Query: 101 MYNHYNERSGLKAPLIADDV--YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLK 158
+ + +R G++A L+ +++ +D+ RL + RD ++Y G +TL Y L
Sbjct: 238 YFPKFIKR-GIEAELLNEELGHFDL-----DRLAGALDSSRDLQFNYLGLQTLYDRYFLH 291
Query: 159 VQGKVVERPQHMLMRVAVGIHKDDI---DSAIKTYHMMSQRWFTHASPTLFNAGTPRAQL 215
V G+ +E PQ MRVA+G+ ++I + AI+ Y ++S F ++PTLFN+GT R+QL
Sbjct: 292 VDGQRIELPQAFFMRVAMGLSLNEINREERAIEFYRLLSSFDFMSSTPTLFNSGTRRSQL 351
Query: 216 SSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPM 275
SSC+L + DD ++GIY+ LKE A++SK AGG+G N+RA GS+I+GTNG S G+VP
Sbjct: 352 SSCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTNVRALGSHIKGTNGKSQGVVPF 410
Query: 276 LRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVP 335
L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R D+ + W+P
Sbjct: 411 LKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTSNWIP 469
Query: 336 DLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLW 390
DLFM+RV G W+LF P+ P L D +G EFE+ YT YE E K K V AQ+LW
Sbjct: 470 DLFMKRVMEGGEWTLFSPSTCPDLHDKFGAEFEKAYTAYEAKVASGELKLFKKVPAQSLW 529
Query: 391 FEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIA 450
++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ TS +E AVCNL S+
Sbjct: 530 RKMLTMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTSDSEIAVCNLGSVN 589
Query: 451 LPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETA 510
L ++ G +K D +KL L+ +ID+NYY V A
Sbjct: 590 LAAHLFPKG--------------HAKAGQIDHDKLKRTVSTAMRMLDNVIDINYYAVAKA 635
Query: 511 RRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREG 570
R SNL+HRP+G+G+ G D L +P+ S A + E + Y+A S+++AA G
Sbjct: 636 RNSNLKHRPVGLGIMGFQDCLHDLRIPYSSDAAIEFADRSMEAVCYYAYWASTDLAAERG 695
Query: 571 PYETYHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRDMISKNGVRNSLLVA 619
Y +Y GS KGIL D V+ S DW LR I +NG+RNS VA
Sbjct: 696 RYASYRGSLWDKGILPQDSLNLLLEQRGGYVEVDMSSNLDWDALRARIQQNGMRNSNCVA 755
Query: 620 PMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKII 679
PTA+ S I+G + C EP NI+ + LSGEF V+N HL++DL +GLW ++ +
Sbjct: 756 IAPTATISNIIGVSACIEPTYQNIFVKSNLSGEFTVINDHLVNDLKALGLWDEVMIADLK 815
Query: 680 YDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKL 739
Y DGS+ KI +IP EL+ +Y T +E++ K L++ A R +ID +QSLNI+M + KL
Sbjct: 816 YFDGSLAKIDRIPAELRELYATAFEVEPKWLIEAASRRQKWIDQAQSLNIYMSGVSGRKL 875
Query: 740 TSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAKMAQMV----- 794
+ AWLRGLKT YYLR+ A A K T L + + +V
Sbjct: 876 DETYKLAWLRGLKT-TYYLRALGATSAEKSTSRAGSLNAVSSGGGAGEMSASPVVEEAKF 934
Query: 795 CSLTNREECMAC 806
CS+ N EC AC
Sbjct: 935 CSIDN-PECEAC 945
>gi|115350551|ref|YP_772390.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
ambifaria AMMD]
gi|115280539|gb|ABI86056.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
ambifaria AMMD]
Length = 999
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 315/773 (40%), Positives = 437/773 (56%), Gaps = 51/773 (6%)
Query: 35 DPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSF 94
+P + + +Y GV SQ+ + A A M P Y+ + ARI+ LH ++
Sbjct: 188 NPEPIVAETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARIL---LHTIRREIL 244
Query: 95 SETI--KDMYNHYNE------RSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYF 146
E + +M Y E + G+ A L+ D + +K RL + +RD + Y
Sbjct: 245 GEEVLQAEMTTRYTEYFPQFLKRGVDAGLLDDKLLQFDLK---RLGEALDANRDLQFGYL 301
Query: 147 GFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASP 203
G +TL Y L V+G +E PQ MRVA+G+ ++ID AI+ Y+++S F ++P
Sbjct: 302 GLQTLYDRYFLHVEGTRIEMPQAFFMRVAMGLSLNEIDRETRAIEFYNVLSSFDFMSSTP 361
Query: 204 TLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT R+QLSSC+L + DD ++GIY+ LKE A++SK AGG+G +RA GS+I+
Sbjct: 362 TLFNSGTHRSQLSSCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIK 420
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEH 323
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G +
Sbjct: 421 GTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRR 479
Query: 324 RARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EG 378
R D+ A W+PDLFM+RV W+LF P+ P L D +G EFE YT YE E
Sbjct: 480 RTHDMNTANWIPDLFMKRVMEGADWTLFSPSTCPDLHDKFGAEFEAAYTAYEDKVARGEI 539
Query: 379 KAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSP 438
K K + AQ LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ TS
Sbjct: 540 KLFKKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSD 599
Query: 439 TETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNK 498
TE AVCNL S+ L ++ + + + D +KL + L+
Sbjct: 600 TEIAVCNLGSVNLVAHLVK---------------QADGSYALDHDKLKRTISVAMRMLDN 644
Query: 499 IIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHA 558
+ID+NYY V AR SNL+HRP+G+G+ G D LL P+ S A + E + Y+A
Sbjct: 645 VIDINYYAVPKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASEAAVEFADRSMEAVCYYA 704
Query: 559 LRTSSEIAAREGPYETYHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRDMI 607
S+E+A G Y +Y GS +GIL D V+ S+ DW LR I
Sbjct: 705 YYASTELAEERGRYSSYRGSLWDRGILPQDTLKLLTEARGGYVEVDTSESLDWTTLRSRI 764
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEM 667
+ +G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L+ DL E
Sbjct: 765 AAHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKER 824
Query: 668 GLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSL 727
GLW ++ + Y DG + +I +IP +L+AIY T +E+ LV+ A R +ID +QSL
Sbjct: 825 GLWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPTWLVEAASRRQKWIDQAQSL 884
Query: 728 NIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
NI+M + KL ++ AWLRGLKT YYLR+ AA K TV L P
Sbjct: 885 NIYMGGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 936
>gi|390576355|ref|ZP_10256425.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
terrae BS001]
gi|420255797|ref|ZP_14758673.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
sp. BT03]
gi|389931694|gb|EIM93752.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
terrae BS001]
gi|398044510|gb|EJL37328.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
sp. BT03]
Length = 997
Score = 550 bits (1417), Expect = e-153, Method: Compositional matrix adjust.
Identities = 309/759 (40%), Positives = 434/759 (57%), Gaps = 47/759 (6%)
Query: 47 VYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKN------TKKSFSETIKD 100
+Y GV +Q+ + A A M P Y+ + ARI++ + + T+ E +
Sbjct: 195 LYDGVPMTQVYDSAILAARTMIEKDPAYSQVTARILLHTIRREILEDEVTQAEMGERYAE 254
Query: 101 MYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQ 160
+ + +R G+ A L+ + + +K RL + + +RD + Y G +TL Y L
Sbjct: 255 YFPLFIKR-GVNAELLDEKLLQFDLK---RLGAALDANRDLQFGYLGLQTLYDRYFLHSD 310
Query: 161 GKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSS 217
G +E PQ MRVA+G+ ++ID AI+ Y+++S F ++PTLFN+GT R+QLSS
Sbjct: 311 GVRIEMPQAFFMRVAMGLSLNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTRRSQLSS 370
Query: 218 CFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLR 277
C+L + DD ++GIY+ LKE A++SK AGG+G +RA GS+I+GTNG S G+VP L+
Sbjct: 371 CYLTTV-DDDLDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLK 429
Query: 278 VFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDL 337
V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R D+ A W+PDL
Sbjct: 430 VVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDL 488
Query: 338 FMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFE 392
FM+RV G W+LF P+ P L D +G +FE+ YT YE+ E K K + A LW +
Sbjct: 489 FMKRVHEGGDWTLFSPSTCPDLHDLFGADFEKAYTAYEEKAARGEIKLFKKIPAAQLWRK 548
Query: 393 ILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALP 452
+L ETG P++ FKD CN +S QQ++G + SSNLCTE+ TS TE AVCNL S+ L
Sbjct: 549 MLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDTEIAVCNLGSVNLV 608
Query: 453 RYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARR 512
+++E + D +KL + L+ +ID+NYY V AR
Sbjct: 609 AHLKE---------------QADGTVVLDHDKLKRTISVAMRMLDNVIDINYYAVAKARN 653
Query: 513 SNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPY 572
SNL+HRP+G+G+ G D +L P+ S EA + E + Y+A S+E+A G Y
Sbjct: 654 SNLKHRPVGMGIMGFQDCLHVLRTPYASQEAVEFADRSMEAVCYYAYWASTELAEERGRY 713
Query: 573 ETYHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRDMISKNGVRNSLLVAPM 621
TY GS +GIL D V+ S+ DW LR IS +G+RNS VA
Sbjct: 714 ATYRGSLWDRGILPQDTLKLLEEARGGYIEVDSSESMDWASLRSRISTHGMRNSNCVAIA 773
Query: 622 PTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYD 681
PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL GLW ++ + Y
Sbjct: 774 PTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNDYLVRDLKARGLWDEVMVADLKYF 833
Query: 682 DGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTS 741
DGS+ +I ++P +L+AIY T +E+ LV+ A R +ID +QSLNI+M + KL
Sbjct: 834 DGSLSRIDRVPGDLRAIYATAFEVDATWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDE 893
Query: 742 LHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
++ AWLRGLKT YYLR+ AA K TV L P
Sbjct: 894 VYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 931
>gi|170699975|ref|ZP_02891002.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
ambifaria IOP40-10]
gi|170135123|gb|EDT03424.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
ambifaria IOP40-10]
Length = 999
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 315/773 (40%), Positives = 437/773 (56%), Gaps = 51/773 (6%)
Query: 35 DPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSF 94
+P + + +Y GV SQ+ + A A M P Y+ + ARI+ LH ++
Sbjct: 187 NPEPIVAETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARIL---LHTIRREIL 243
Query: 95 SETI--KDMYNHYNE------RSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYF 146
E + +M Y E + G+ A L+ D + +K RL + +RD + Y
Sbjct: 244 GEEVLQAEMSTRYTEYFPQFLKRGVDAGLLDDKLLQFDLK---RLGEALDANRDLQFGYL 300
Query: 147 GFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASP 203
G +TL Y L V+G +E PQ MRVA+G+ ++ID AI+ Y+++S F ++P
Sbjct: 301 GLQTLYDRYFLHVEGTRIEMPQAFFMRVAMGLSLNEIDRETRAIEFYNVLSSFDFMSSTP 360
Query: 204 TLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT R+QLSSC+L + DD ++GIY+ LKE A++SK AGG+G +RA GS+I+
Sbjct: 361 TLFNSGTHRSQLSSCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIK 419
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEH 323
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G +
Sbjct: 420 GTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRR 478
Query: 324 RARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EG 378
R D+ A W+PDLFM+RV W+LF P+ P L D +G EFE YT YE E
Sbjct: 479 RTHDMNTANWIPDLFMKRVMEGTDWTLFSPSTCPDLHDKFGAEFEAAYTAYEDKVARGEI 538
Query: 379 KAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSP 438
K K + AQ LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ TS
Sbjct: 539 KLFKKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSD 598
Query: 439 TETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNK 498
TE AVCNL S+ L ++ + + + D +KL + L+
Sbjct: 599 TEIAVCNLGSVNLVAHLVK---------------QADGSYALDHDKLKRTISVAMRMLDN 643
Query: 499 IIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHA 558
+ID+NYY V AR SNL+HRP+G+G+ G D LL P+ S A + E + Y+A
Sbjct: 644 VIDINYYAVPKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASEAAVEFADRSMEAVCYYA 703
Query: 559 LRTSSEIAAREGPYETYHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRDMI 607
S+E+A G Y +Y GS +GIL D V+ S+ DW LR I
Sbjct: 704 YYASTELAEERGRYSSYRGSLWDRGILPQDTLKLLTEARGGYVEVDTSESLDWTTLRSRI 763
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEM 667
+ +G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L+ DL E
Sbjct: 764 AAHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKER 823
Query: 668 GLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSL 727
GLW ++ + Y DG + +I +IP +L+AIY T +E+ LV+ A R +ID +QSL
Sbjct: 824 GLWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPTWLVEAASRRQKWIDQAQSL 883
Query: 728 NIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
NI+M + KL ++ AWLRGLKT YYLR+ AA K TV L P
Sbjct: 884 NIYMGGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 935
>gi|172059583|ref|YP_001807235.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
ambifaria MC40-6]
gi|171992100|gb|ACB63019.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
ambifaria MC40-6]
Length = 999
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 315/773 (40%), Positives = 437/773 (56%), Gaps = 51/773 (6%)
Query: 35 DPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSF 94
+P + + +Y GV SQ+ + A A M P Y+ + ARI+ LH ++
Sbjct: 188 NPEPIVAETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARIL---LHTIRREIL 244
Query: 95 SETI--KDMYNHYNE------RSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYF 146
E + +M Y E + G+ A L+ D + +K RL + +RD + Y
Sbjct: 245 GEEVLQAEMATRYTEYFPQFLKRGVDAGLLDDKLLQFDLK---RLGEALDANRDLQFGYL 301
Query: 147 GFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASP 203
G +TL Y L V+G +E PQ MRVA+G+ ++ID AI+ Y+++S F ++P
Sbjct: 302 GLQTLYDRYFLHVEGTRIEMPQAFFMRVAMGLSLNEIDRETRAIEFYNVLSSFDFMSSTP 361
Query: 204 TLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT R+QLSSC+L + DD ++GIY+ LKE A++SK AGG+G +RA GS+I+
Sbjct: 362 TLFNSGTHRSQLSSCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIK 420
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEH 323
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G +
Sbjct: 421 GTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRR 479
Query: 324 RARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EG 378
R D+ A W+PDLFM+RV W+LF P+ P L D +G EFE YT YE E
Sbjct: 480 RTHDMNTANWIPDLFMKRVMEGADWTLFSPSTCPDLHDKFGAEFEAAYTAYEDKVARGEI 539
Query: 379 KAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSP 438
K K + AQ LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ TS
Sbjct: 540 KLFKKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSD 599
Query: 439 TETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNK 498
TE AVCNL S+ L ++ + + + D +KL + L+
Sbjct: 600 TEIAVCNLGSVNLVAHLVK---------------QADGSYALDQDKLKRTISVAMRMLDN 644
Query: 499 IIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHA 558
+ID+NYY V AR SNL+HRP+G+G+ G D LL P+ S A + E + Y+A
Sbjct: 645 VIDINYYAVPKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASEAAVEFADRSMEAVCYYA 704
Query: 559 LRTSSEIAAREGPYETYHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRDMI 607
S+E+A G Y +Y GS +GIL D V+ S+ DW LR I
Sbjct: 705 YYASTELAEERGRYSSYRGSLWDRGILPQDTLKLLTEARGGYVEVDTSESLDWTTLRSRI 764
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEM 667
+ +G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L+ DL E
Sbjct: 765 AAHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKER 824
Query: 668 GLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSL 727
GLW ++ + Y DG + +I +IP +L+AIY T +E+ LV+ A R +ID +QSL
Sbjct: 825 GLWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPTWLVEAASRRQKWIDQAQSL 884
Query: 728 NIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
NI+M + KL ++ AWLRGLKT YYLR+ AA K TV L P
Sbjct: 885 NIYMGGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 936
>gi|424902823|ref|ZP_18326336.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
thailandensis MSMB43]
gi|390930696|gb|EIP88097.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
thailandensis MSMB43]
Length = 965
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 321/804 (39%), Positives = 447/804 (55%), Gaps = 52/804 (6%)
Query: 4 VKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAET 63
V +G A+ + + A + GL + +P + + +Y GV +Q+ + +
Sbjct: 127 VTDNGVTRALDLNALRALIVSACEGLG-DAVNPEPIVAETVKNLYDGVPMTQVYDSSILA 185
Query: 64 AAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETI--KDMYNHYNE------RSGLKAPL 115
A M P Y+ + AR++ LH ++ E + +M Y E + G++A L
Sbjct: 186 ARTMIEKDPAYSQVTARVL---LHTIRREILGEEVTQAEMATRYAEYFPQFLKRGVEAEL 242
Query: 116 IADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVA 175
+ D + +K RL + RD + Y G +TL Y L V G +E PQ MRVA
Sbjct: 243 LDDKLLQFDLK---RLGDALDASRDLQFGYLGLQTLYDRYFLHVDGTRIEMPQAFFMRVA 299
Query: 176 VGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIY 232
+G+ ++ID AI+ Y+++S F ++PTLFN+GT R+QLSSC+L + DD ++GIY
Sbjct: 300 MGLALNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTVADD-LDGIY 358
Query: 233 DTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGK 292
+ LK+ A++SK AGG+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG K
Sbjct: 359 EALKDNALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-K 417
Query: 293 RKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFC 352
RKGA YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV G W+LF
Sbjct: 418 RKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGGDWTLFS 477
Query: 353 PNEAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQIETGTPYMLF 407
P+ P L D +G EFE Y YE+ E K K + AQ LW ++L ETG P++ F
Sbjct: 478 PSTCPDLHDKFGAEFEAAYVGYEEKVARGEIKLFKKIPAQQLWRKMLGMLFETGHPWITF 537
Query: 408 KDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPS 467
KD CN +S QQ++G + SSNLCTE+ TS E AVCNL S+ L +H +
Sbjct: 538 KDPCNVRSPQQHVGVVHSSNLCTEITLNTSDAEIAVCNLGSVNLV-----------AHLA 586
Query: 468 KLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
K + D EKL + L+ +ID+NYY V AR SNL+HRP+G+G+ G
Sbjct: 587 K----QADGTYALDEEKLKRTVSVAMRMLDNVIDINYYAVAKARNSNLKHRPVGLGIMGF 642
Query: 528 ADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQP 587
D LL P+ S EA + E + Y+A S+E+A G Y +Y GS +GIL
Sbjct: 643 QDCLHLLRTPYASGEAVEFADRSMEAVCYYAYWASTELAEERGRYSSYRGSLWDRGILPQ 702
Query: 588 DMWG-----------VNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
D V+ S DW LR I G+RNS VA PTA+ S I+G + C
Sbjct: 703 DTLKLLTEARGGYVEVDTSATLDWPALRARIDSFGMRNSNCVAIAPTATISNIIGVSACI 762
Query: 637 EPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELK 696
EP N+Y + LSGEF VVN++L+ DL E GLW ++ + Y DG + +I +IP +L+
Sbjct: 763 EPTFQNLYVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADLR 822
Query: 697 AIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMY 756
AIY T +E+ K LV+ A R +ID +QSLNI+M + KL ++ AWLRGLKT Y
Sbjct: 823 AIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIYMGGASGKKLDEVYKLAWLRGLKT-TY 881
Query: 757 YLRSRAAADAIKFTVDTSVLKENP 780
YLR+ AA K TV L P
Sbjct: 882 YLRTMAATHVEKSTVAHGALNAVP 905
>gi|377821696|ref|YP_004978067.1| ribonucleoside-diphosphate reductase subunit alpha [Burkholderia
sp. YI23]
gi|357936531|gb|AET90090.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
sp. YI23]
Length = 1001
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 313/772 (40%), Positives = 441/772 (57%), Gaps = 49/772 (6%)
Query: 34 CDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKN---- 89
DP++ + +Y GV SQ+ + A A M P Y+ + +RI++ + +
Sbjct: 190 ADPIVA--ETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTSRILLHTIRREILEG 247
Query: 90 --TKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFG 147
T+ E + + + +R G++A L+ D + +K RL + + +RD + Y G
Sbjct: 248 EVTQAEMGERYAEYFPLFIKR-GVEAGLLDDKLQQFDLK---RLGAALDANRDLQFGYLG 303
Query: 148 FKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASPT 204
+TL Y L V+G +E PQ MRVA+G+ ++ID AI+ Y+++S F ++PT
Sbjct: 304 LQTLYDRYFLHVEGTRIELPQAFFMRVAMGLSLNEIDREARAIEFYNVLSSFDFMSSTPT 363
Query: 205 LFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRG 264
LFN+GT R+QLSSC+L + DD ++GIY+ LKE A++SK AGG+G +RA GS+I+G
Sbjct: 364 LFNSGTHRSQLSSCYLTTVSDD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIKG 422
Query: 265 TNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHR 324
TNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R
Sbjct: 423 TNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRRR 481
Query: 325 ARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EGK 379
D+ A W+PDLFM+RV G W+LF P+ P L D +G +FE+ Y YE+ E K
Sbjct: 482 THDMNTANWIPDLFMKRVVEGGDWTLFSPSTCPDLHDLFGADFEKAYVAYEEKAARGEIK 541
Query: 380 AKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPT 439
K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ TS T
Sbjct: 542 LFKKLPAAQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSET 601
Query: 440 ETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKI 499
E AVCNL S+ L +H K + D KL + L+ +
Sbjct: 602 EIAVCNLGSVNLV-----------AHMVK----QADGTYALDHAKLKRTISVAMRMLDNV 646
Query: 500 IDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHAL 559
ID+NYY V AR SNL+HRP+G+G+ G D LL P+ S +A + E + Y+A
Sbjct: 647 IDINYYAVPKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASGDAVEFADRSMEAVCYYAY 706
Query: 560 RTSSEIAAREGPYETYHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRDMIS 608
S+E+A G Y TY GS +GIL D V+ S+ DW LR IS
Sbjct: 707 YASTELAEERGRYATYRGSLWDRGILPQDSLKLLADARGGYVEVDSSESMDWPALRSRIS 766
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMG 668
+ G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL G
Sbjct: 767 QYGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNDYLVRDLKARG 826
Query: 669 LWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLN 728
LW ++ + + Y DG++ +I +IP +L+AIY T +E+ K LV+ A R +ID +QSLN
Sbjct: 827 LWDEVMVSDLKYFDGTLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQSLN 886
Query: 729 IHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
I+M + KL ++ AW+RGLKT YYLR+ AA K TV L P
Sbjct: 887 IYMAGASGKKLDEVYKLAWIRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 937
>gi|187925408|ref|YP_001897050.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
phytofirmans PsJN]
gi|187716602|gb|ACD17826.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
phytofirmans PsJN]
Length = 1001
Score = 550 bits (1416), Expect = e-153, Method: Compositional matrix adjust.
Identities = 310/768 (40%), Positives = 437/768 (56%), Gaps = 49/768 (6%)
Query: 34 CDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKN---- 89
DP++ + +Y GV SQ+ + A A M P Y+ + ARI++ + +
Sbjct: 184 ADPIIA--ETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARILLHTIRREILKE 241
Query: 90 --TKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFG 147
T+ E + + + +R G++A L+ D + +K RL + + +RD + Y G
Sbjct: 242 EVTQTEMGERYAEYFPQFIKR-GVQAELLDDKLLQFDLK---RLGAALDNNRDLQFGYLG 297
Query: 148 FKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASPT 204
+TL Y L G +E PQ MRVA+G+ ++ID AI+ Y+++S F ++PT
Sbjct: 298 LQTLYDRYFLHHDGVRIEMPQAFFMRVAMGLSLNEIDREARAIEFYNVLSSFDFMSSTPT 357
Query: 205 LFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRG 264
LFN+GT R+QLSSC+L + DD ++GIY+ LKE A++SK AGG+G +RA GS+I+G
Sbjct: 358 LFNSGTRRSQLSSCYLTTV-DDDLDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIKG 416
Query: 265 TNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHR 324
TNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R
Sbjct: 417 TNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRRR 475
Query: 325 ARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EGK 379
D+ A W+PDLFM+RV G W+LF P+ P L D +G +FE+ YT YE E K
Sbjct: 476 THDMNTANWIPDLFMKRVMEGGDWTLFSPSTCPDLHDLFGADFEKAYTAYEDKVARGEIK 535
Query: 380 AKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPT 439
K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ TS
Sbjct: 536 LFKKIPAAQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDA 595
Query: 440 ETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKI 499
E AVCNL S+ L +++E + D +KL + L+ +
Sbjct: 596 EIAVCNLGSVNLVAHLKE---------------QADGTLVLDHDKLKRTVSVAMRMLDNV 640
Query: 500 IDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHAL 559
ID+NYY V AR SNL+HRP+G+G+ G D LL P+ S EA + E + Y+A
Sbjct: 641 IDINYYAVAKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASEEAVKFADTSMEAVCYYAY 700
Query: 560 RTSSEIAAREGPYETYHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRDMIS 608
S+E+A G Y +Y GS +GIL D V+ S+ DW LR I+
Sbjct: 701 YASTELAQERGRYSSYRGSLWDRGILPQDSVKLLADARGGYVEVDSSESMDWTELRSRIA 760
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMG 668
G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL G
Sbjct: 761 TYGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNDYLVRDLKARG 820
Query: 669 LWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLN 728
LW ++ + Y DG++ +I +IP +L+AIY T +E+ K LV+ A R +ID +QSLN
Sbjct: 821 LWDEVMVADLKYFDGTLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQSLN 880
Query: 729 IHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
I+M + KL ++ AW+RGLKT YYLR+ AA K TV L
Sbjct: 881 IYMGGASGKKLDEIYKLAWVRGLKT-TYYLRTMAATHVEKSTVAHGAL 927
>gi|167837967|ref|ZP_02464826.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
thailandensis MSMB43]
Length = 956
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 321/804 (39%), Positives = 447/804 (55%), Gaps = 52/804 (6%)
Query: 4 VKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAET 63
V +G A+ + + A + GL + +P + + +Y GV +Q+ + +
Sbjct: 157 VTDNGVTRALDLNALRALIVSACEGLG-DAVNPEPIVAETVKNLYDGVPMTQVYDSSILA 215
Query: 64 AAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETI--KDMYNHYNE------RSGLKAPL 115
A M P Y+ + AR++ LH ++ E + +M Y E + G++A L
Sbjct: 216 ARTMIEKDPAYSQVTARVL---LHTIRREILGEEVTQAEMATRYAEYFPQFLKRGVEAEL 272
Query: 116 IADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVA 175
+ D + +K RL + RD + Y G +TL Y L V G +E PQ MRVA
Sbjct: 273 LDDKLLQFDLK---RLGDALDASRDLQFGYLGLQTLYDRYFLHVDGTRIEMPQAFFMRVA 329
Query: 176 VGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIY 232
+G+ ++ID AI+ Y+++S F ++PTLFN+GT R+QLSSC+L + DD ++GIY
Sbjct: 330 MGLALNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTVADD-LDGIY 388
Query: 233 DTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGK 292
+ LK+ A++SK AGG+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG K
Sbjct: 389 EALKDNALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-K 447
Query: 293 RKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFC 352
RKGA YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV G W+LF
Sbjct: 448 RKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGGDWTLFS 507
Query: 353 PNEAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQIETGTPYMLF 407
P+ P L D +G EFE Y YE+ E K K + AQ LW ++L ETG P++ F
Sbjct: 508 PSTCPDLHDKFGAEFEAAYVGYEEKVARGEIKLFKKIPAQQLWRKMLGMLFETGHPWITF 567
Query: 408 KDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPS 467
KD CN +S QQ++G + SSNLCTE+ TS E AVCNL S+ L +H +
Sbjct: 568 KDPCNVRSPQQHVGVVHSSNLCTEITLNTSDAEIAVCNLGSVNLV-----------AHLA 616
Query: 468 KLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
K + D EKL + L+ +ID+NYY V AR SNL+HRP+G+G+ G
Sbjct: 617 K----QADGTYALDEEKLKRTVSVAMRMLDNVIDINYYAVAKARNSNLKHRPVGLGIMGF 672
Query: 528 ADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQP 587
D LL P+ S EA + E + Y+A S+E+A G Y +Y GS +GIL
Sbjct: 673 QDCLHLLRTPYASGEAVEFADRSMEAVCYYAYWASTELAEERGRYSSYRGSLWDRGILPQ 732
Query: 588 DMWG-----------VNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
D V+ S DW LR I G+RNS VA PTA+ S I+G + C
Sbjct: 733 DTLKLLTEARGGYVEVDTSATLDWPALRARIDSFGMRNSNCVAIAPTATISNIIGVSACI 792
Query: 637 EPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELK 696
EP N+Y + LSGEF VVN++L+ DL E GLW ++ + Y DG + +I +IP +L+
Sbjct: 793 EPTFQNLYVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADLR 852
Query: 697 AIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMY 756
AIY T +E+ K LV+ A R +ID +QSLNI+M + KL ++ AWLRGLKT Y
Sbjct: 853 AIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIYMGGASGKKLDEVYKLAWLRGLKT-TY 911
Query: 757 YLRSRAAADAIKFTVDTSVLKENP 780
YLR+ AA K TV L P
Sbjct: 912 YLRTMAATHVEKSTVAHGALNAVP 935
>gi|385208004|ref|ZP_10034872.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
sp. Ch1-1]
gi|385180342|gb|EIF29618.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
sp. Ch1-1]
Length = 1001
Score = 549 bits (1415), Expect = e-153, Method: Compositional matrix adjust.
Identities = 311/768 (40%), Positives = 437/768 (56%), Gaps = 49/768 (6%)
Query: 34 CDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKN---- 89
DP++ + +Y GV SQ+ + A A M P Y+ + ARI++ + +
Sbjct: 184 ADPIIA--ETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARILLHTIRREILEE 241
Query: 90 --TKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFG 147
T+ E + + + +R G++A L+ D + +K RL + + +RD + Y G
Sbjct: 242 EVTQTEMGERYAEYFPQFIKR-GVQAELLDDKLLQFDLK---RLGAALDNNRDLQFGYLG 297
Query: 148 FKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASPT 204
+TL Y L G +E PQ MRVA+G+ ++ID AI+ Y+++S F ++PT
Sbjct: 298 LQTLYDRYFLHHDGVRIEMPQAFFMRVAMGLSLNEIDREARAIEFYNVLSTFDFMSSTPT 357
Query: 205 LFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRG 264
LFN+GT R+QLSSC+L + DD ++GIY+ LKE A++SK AGG+G +RA GS+I+G
Sbjct: 358 LFNSGTRRSQLSSCYLTTV-DDDLDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIKG 416
Query: 265 TNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHR 324
TNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R
Sbjct: 417 TNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRR 475
Query: 325 ARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EGK 379
D+ A W+PDLFM+RV G W+LF P+ P L D +G EFE+ YT YE E K
Sbjct: 476 THDMNTANWIPDLFMKRVMEGGDWTLFSPSTCPDLHDKFGAEFEKAYTAYEDKVARGEIK 535
Query: 380 AKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPT 439
K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ TS
Sbjct: 536 LFKKIPAAQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDA 595
Query: 440 ETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKI 499
E AVCNL S+ L +++E + D +KL + L+ +
Sbjct: 596 EIAVCNLGSVNLVAHLKE---------------QADGTLVLDHDKLKRTVSVAMRMLDNV 640
Query: 500 IDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHAL 559
ID+NYY V AR SNL+HRP+G+G+ G D LL P+ S EA + E + Y+A
Sbjct: 641 IDINYYAVAKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASEEAVKFADTSMEAVCYYAY 700
Query: 560 RTSSEIAAREGPYETYHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRDMIS 608
S+E+A G Y +Y GS +GIL D V+ S+ DW LR I+
Sbjct: 701 YASTELAQERGRYSSYRGSLWDRGILPQDSVKLLAEARGGYVEVDSSESMDWTELRSRIA 760
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMG 668
G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL G
Sbjct: 761 TYGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNDYLVRDLKARG 820
Query: 669 LWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLN 728
LW ++ + Y DG++ +I +IP +L+AIY T +E+ K LV+ A R +ID +QSLN
Sbjct: 821 LWDEVMVADLKYFDGTLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQSLN 880
Query: 729 IHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
I+M + KL ++ AW+RGLKT YYLR+ AA K TV L
Sbjct: 881 IYMGGASGKKLDEIYKLAWVRGLKT-TYYLRTMAATHVEKSTVAHGAL 927
>gi|167721299|ref|ZP_02404535.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei DM98]
Length = 942
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 322/804 (40%), Positives = 446/804 (55%), Gaps = 52/804 (6%)
Query: 4 VKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAET 63
V +G A+ + + A + GL P + + +Y GV +Q+ + +
Sbjct: 157 VTDNGVTRALDLNALRALIVSACEGLG-NAVSPEPIVAETVKNLYDGVPMTQVYDSSILA 215
Query: 64 AAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETI--KDMYNHYNE------RSGLKAPL 115
A M P Y+ + ARI+ LH ++ E + +M Y E + G++A L
Sbjct: 216 ARTMIEKDPAYSQVTARIL---LHTIRREILGEEVTQAEMTTRYAEYFPQFLKRGVEAEL 272
Query: 116 IADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVA 175
+ D + +K RL + RD + Y G +TL Y L V G +E PQ MRVA
Sbjct: 273 LDDKLLQFDLK---RLGDALDASRDLQFGYLGLQTLYDRYFLHVDGTRIEMPQAFFMRVA 329
Query: 176 VGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIY 232
+G+ ++ID AI+ Y+++S F ++PTLFN+GT R+QLSSC+L + DD ++GIY
Sbjct: 330 MGLALNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTVADD-LDGIY 388
Query: 233 DTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGK 292
+ LK+ A++SK AGG+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG K
Sbjct: 389 EALKDNALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-K 447
Query: 293 RKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFC 352
RKGA YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV W+LF
Sbjct: 448 RKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGADWTLFS 507
Query: 353 PNEAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQIETGTPYMLF 407
P+ P L D +G EFE Y YE+ E K K + AQ LW ++L ETG P++ F
Sbjct: 508 PSTCPDLHDKFGAEFEAAYVGYEEKVARGEIKLFKKIPAQQLWRKMLGMLFETGHPWITF 567
Query: 408 KDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPS 467
KD CN +S QQ++G + SSNLCTE+ TS TE AVCNL S+ L +H +
Sbjct: 568 KDPCNVRSPQQHVGVVHSSNLCTEITLNTSDTEIAVCNLGSVNLV-----------AHLA 616
Query: 468 KLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
K + + D EKL + L+ +ID+NYY V AR SNL+HRP+G+G+ G
Sbjct: 617 K----QADGSYALDEEKLKRTVSVAMRMLDNVIDINYYAVAKARNSNLKHRPVGLGIMGF 672
Query: 528 ADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQP 587
D LL P+ S EA + E + Y+A S+E+A G Y +Y GS +GIL
Sbjct: 673 QDCLHLLRTPYASDEAVEFADRSMEAVCYYAYWASTELAEERGRYSSYRGSLWDRGILPQ 732
Query: 588 DMWG-----------VNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
D V+ S DW LR I G+RNS VA PTA+ S I+G + C
Sbjct: 733 DTLKLLTEARGGYVEVDTSATLDWPALRARIDSFGMRNSNCVAIAPTATISNIIGVSACI 792
Query: 637 EPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELK 696
EP N+Y + LSGEF VVN++L+ DL E GLW ++ + Y DG + +I +IP +L+
Sbjct: 793 EPTFQNLYVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADLR 852
Query: 697 AIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMY 756
AIY T +E+ K LV+ A R +ID +QSLNI+M + KL ++ AWLRGLKT Y
Sbjct: 853 AIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDEVYKLAWLRGLKT-TY 911
Query: 757 YLRSRAAADAIKFTVDTSVLKENP 780
YLR+ AA K TV L P
Sbjct: 912 YLRTMAATHVEKSTVAHGALNAVP 935
>gi|91785258|ref|YP_560464.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
xenovorans LB400]
gi|91689212|gb|ABE32412.1| Ribonucleoside-diphosphate reductase [Burkholderia xenovorans
LB400]
Length = 1001
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 311/768 (40%), Positives = 437/768 (56%), Gaps = 49/768 (6%)
Query: 34 CDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKN---- 89
DP++ + +Y GV SQ+ + A A M P Y+ + ARI++ + +
Sbjct: 184 ADPIIA--ETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARILLHTIRREILEE 241
Query: 90 --TKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFG 147
T+ E + + + +R G++A L+ D + +K RL + + +RD + Y G
Sbjct: 242 EVTQTEMGERYAEYFPQFIKR-GVQAELLDDKLLQFDLK---RLGAALDNNRDLQFGYLG 297
Query: 148 FKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASPT 204
+TL Y L G +E PQ MRVA+G+ ++ID AI+ Y+++S F ++PT
Sbjct: 298 LQTLYDRYFLHHDGVRIEMPQAFFMRVAMGLSLNEIDREARAIEFYNVLSTFDFMSSTPT 357
Query: 205 LFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRG 264
LFN+GT R+QLSSC+L + DD ++GIY+ LKE A++SK AGG+G +RA GS+I+G
Sbjct: 358 LFNSGTRRSQLSSCYLTTV-DDDLDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIKG 416
Query: 265 TNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHR 324
TNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R
Sbjct: 417 TNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRR 475
Query: 325 ARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EGK 379
D+ A W+PDLFM+RV G W+LF P+ P L D +G EFE YT YE E K
Sbjct: 476 THDMNTANWIPDLFMKRVMEGGDWTLFSPSTCPDLHDKFGAEFETAYTAYEDKVARGEIK 535
Query: 380 AKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPT 439
K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ TS
Sbjct: 536 LFKKIPAAQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDA 595
Query: 440 ETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKI 499
E AVCNL S+ L +++E + D +KL + L+ +
Sbjct: 596 EIAVCNLGSVNLVAHLKE---------------QADGTLVLDHDKLKRTVSVAMRMLDNV 640
Query: 500 IDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHAL 559
ID+NYY V AR SNL+HRP+G+G+ G D LL P+ S EA + E + Y+A
Sbjct: 641 IDINYYAVAKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASEEAVRFADTSMEAVCYYAY 700
Query: 560 RTSSEIAAREGPYETYHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRDMIS 608
S+E+A G Y +Y GS +GIL D V+ S+ DW LR I+
Sbjct: 701 YASTELAQERGRYSSYRGSLWDRGILPQDSVKLLAEARGGYVEVDSSESMDWTELRSRIA 760
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMG 668
+ G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL G
Sbjct: 761 QYGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNDYLVRDLKARG 820
Query: 669 LWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLN 728
LW ++ + Y DG++ +I +IP +L+AIY T +E+ K LV+ A R +ID +QSLN
Sbjct: 821 LWDEVMVADLKYFDGTLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQSLN 880
Query: 729 IHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
I+M + KL ++ AW+RGLKT YYLR+ AA K TV L
Sbjct: 881 IYMGGASGKKLDEIYKLAWVRGLKT-TYYLRTMAATHVEKSTVAHGAL 927
>gi|167895963|ref|ZP_02483365.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 7894]
Length = 995
Score = 549 bits (1414), Expect = e-153, Method: Compositional matrix adjust.
Identities = 322/804 (40%), Positives = 447/804 (55%), Gaps = 52/804 (6%)
Query: 4 VKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAET 63
V +G A+ + + A + GL + P + + +Y GV +Q+ + +
Sbjct: 157 VTDNGVTRALDLNALRALIVSACEGLG-DAVSPEPIVAETVKNLYDGVPMTQVYDSSILA 215
Query: 64 AAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETI--KDMYNHYNE------RSGLKAPL 115
A M P Y+ + ARI+ LH ++ E + +M Y E + G++A L
Sbjct: 216 ARTMIEKDPAYSQVTARIL---LHTIRREILGEEVTQAEMTTRYAEYFPQFLKRGVEAEL 272
Query: 116 IADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVA 175
+ D + +K RL + RD + Y G +TL Y L V G +E PQ MRVA
Sbjct: 273 LDDKLLQFDLK---RLGDALDASRDLQFGYLGLQTLYDRYFLHVDGTRIEMPQAFFMRVA 329
Query: 176 VGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIY 232
+G+ ++ID AI+ Y+++S F ++PTLFN+GT R+QLSSC+L + DD ++GIY
Sbjct: 330 MGLALNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTVADD-LDGIY 388
Query: 233 DTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGK 292
+ LK+ A++SK AGG+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG K
Sbjct: 389 EALKDNALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-K 447
Query: 293 RKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFC 352
RKGA YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV W+LF
Sbjct: 448 RKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGADWTLFS 507
Query: 353 PNEAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQIETGTPYMLF 407
P+ P L D +G EFE Y YE+ E K K + AQ LW ++L ETG P++ F
Sbjct: 508 PSTCPDLHDKFGAEFEAAYVGYEEKVARGEIKLFKKIPAQQLWRKMLGMLFETGHPWITF 567
Query: 408 KDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPS 467
KD CN +S QQ++G + SSNLCTE+ TS TE AVCNL S+ L +H +
Sbjct: 568 KDPCNVRSPQQHVGVVHSSNLCTEITLNTSDTEIAVCNLGSVNLV-----------AHLA 616
Query: 468 KLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
K + + D EKL + L+ +ID+NYY V AR SNL+HRP+G+G+ G
Sbjct: 617 K----QADGSYALDEEKLKRTVSVAMRMLDNVIDINYYAVAKARNSNLKHRPVGLGIMGF 672
Query: 528 ADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQP 587
D LL P+ S EA + E + Y+A S+E+A G Y +Y GS +GIL
Sbjct: 673 QDCLHLLRTPYASDEAVEFADRSMEAVCYYAYWASTELAEERGRYSSYRGSLWDRGILPQ 732
Query: 588 DMWG-----------VNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
D V+ S DW LR I G+RNS VA PTA+ S I+G + C
Sbjct: 733 DTLKLLTEARGGYVEVDTSATLDWPALRARIDSFGMRNSNCVAIAPTATISNIIGVSACI 792
Query: 637 EPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELK 696
EP N+Y + LSGEF VVN++L+ DL E GLW ++ + Y DG + +I +IP +L+
Sbjct: 793 EPTFQNLYVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADLR 852
Query: 697 AIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMY 756
AIY T +E+ K LV+ A R +ID +QSLNI+M + KL ++ AWLRGLKT Y
Sbjct: 853 AIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDEVYKLAWLRGLKT-TY 911
Query: 757 YLRSRAAADAIKFTVDTSVLKENP 780
YLR+ AA K TV L P
Sbjct: 912 YLRTMAATHVEKSTVAHGALNAVP 935
>gi|167912608|ref|ZP_02499699.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 112]
Length = 953
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 322/804 (40%), Positives = 447/804 (55%), Gaps = 52/804 (6%)
Query: 4 VKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAET 63
V +G A+ + + A + GL + P + + +Y GV +Q+ + +
Sbjct: 157 VTDNGVTRALDLNALRALIVSACEGLG-DAVSPEPIVAETVKNLYDGVPMTQVYDSSILA 215
Query: 64 AAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETI--KDMYNHYNE------RSGLKAPL 115
A M P Y+ + ARI+ LH ++ E + +M Y E + G++A L
Sbjct: 216 ARTMIEKDPAYSQVTARIL---LHTIRREILGEEVTQAEMTTRYAEYFPQFLKRGVEAEL 272
Query: 116 IADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVA 175
+ D + +K RL + RD + Y G +TL Y L V G +E PQ MRVA
Sbjct: 273 LDDKLLQFDLK---RLGDALDASRDLQFGYLGLQTLYDRYFLHVDGTRIEMPQAFFMRVA 329
Query: 176 VGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIY 232
+G+ ++ID AI+ Y+++S F ++PTLFN+GT R+QLSSC+L + DD ++GIY
Sbjct: 330 MGLALNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTVADD-LDGIY 388
Query: 233 DTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGK 292
+ LK+ A++SK AGG+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG K
Sbjct: 389 EALKDNALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-K 447
Query: 293 RKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFC 352
RKGA YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV W+LF
Sbjct: 448 RKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGADWTLFS 507
Query: 353 PNEAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQIETGTPYMLF 407
P+ P L D +G EFE Y YE+ E K K + AQ LW ++L ETG P++ F
Sbjct: 508 PSTCPDLHDKFGAEFEAAYVGYEEKVARGEIKLFKKIPAQQLWRKMLGMLFETGHPWITF 567
Query: 408 KDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPS 467
KD CN +S QQ++G + SSNLCTE+ TS TE AVCNL S+ L +H +
Sbjct: 568 KDPCNVRSPQQHVGVVHSSNLCTEITLNTSDTEIAVCNLGSVNLV-----------AHLA 616
Query: 468 KLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
K + + D EKL + L+ +ID+NYY V AR SNL+HRP+G+G+ G
Sbjct: 617 K----QADGSYALDEEKLKRTVSVAMRMLDNVIDINYYAVAKARNSNLKHRPVGLGIMGF 672
Query: 528 ADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQP 587
D LL P+ S EA + E + Y+A S+E+A G Y +Y GS +GIL
Sbjct: 673 QDCLHLLRTPYASDEAVEFADRSMEAVCYYAYWASTELAEERGRYSSYRGSLWDRGILPQ 732
Query: 588 DMWG-----------VNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
D V+ S DW LR I G+RNS VA PTA+ S I+G + C
Sbjct: 733 DTLKLLTEARGGYVEVDTSATLDWPALRARIDSFGMRNSNCVAIAPTATISNIIGVSACI 792
Query: 637 EPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELK 696
EP N+Y + LSGEF VVN++L+ DL E GLW ++ + Y DG + +I +IP +L+
Sbjct: 793 EPTFQNLYVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADLR 852
Query: 697 AIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMY 756
AIY T +E+ K LV+ A R +ID +QSLNI+M + KL ++ AWLRGLKT Y
Sbjct: 853 AIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDEVYKLAWLRGLKT-TY 911
Query: 757 YLRSRAAADAIKFTVDTSVLKENP 780
YLR+ AA K TV L P
Sbjct: 912 YLRTMAATHVEKSTVAHGALNAVP 935
>gi|167740268|ref|ZP_02413042.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 14]
gi|167817488|ref|ZP_02449168.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 91]
gi|167847375|ref|ZP_02472883.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei B7210]
Length = 954
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 322/804 (40%), Positives = 447/804 (55%), Gaps = 52/804 (6%)
Query: 4 VKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAET 63
V +G A+ + + A + GL + P + + +Y GV +Q+ + +
Sbjct: 157 VTDNGVTRALDLNALRALIVSACEGLG-DAVSPEPIVAETVKNLYDGVPMTQVYDSSILA 215
Query: 64 AAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETI--KDMYNHYNE------RSGLKAPL 115
A M P Y+ + ARI+ LH ++ E + +M Y E + G++A L
Sbjct: 216 ARTMIEKDPAYSQVTARIL---LHTIRREILGEEVTQAEMTTRYAEYFPQFLKRGVEAEL 272
Query: 116 IADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVA 175
+ D + +K RL + RD + Y G +TL Y L V G +E PQ MRVA
Sbjct: 273 LDDKLLQFDLK---RLGDALDASRDLQFGYLGLQTLYDRYFLHVDGTRIEMPQAFFMRVA 329
Query: 176 VGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIY 232
+G+ ++ID AI+ Y+++S F ++PTLFN+GT R+QLSSC+L + DD ++GIY
Sbjct: 330 MGLALNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTVADD-LDGIY 388
Query: 233 DTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGK 292
+ LK+ A++SK AGG+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG K
Sbjct: 389 EALKDNALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-K 447
Query: 293 RKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFC 352
RKGA YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV W+LF
Sbjct: 448 RKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGADWTLFS 507
Query: 353 PNEAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQIETGTPYMLF 407
P+ P L D +G EFE Y YE+ E K K + AQ LW ++L ETG P++ F
Sbjct: 508 PSTCPDLHDKFGAEFEAAYVGYEEKVARGEIKLFKKIPAQQLWRKMLGMLFETGHPWITF 567
Query: 408 KDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPS 467
KD CN +S QQ++G + SSNLCTE+ TS TE AVCNL S+ L +H +
Sbjct: 568 KDPCNVRSPQQHVGVVHSSNLCTEITLNTSDTEIAVCNLGSVNLV-----------AHLA 616
Query: 468 KLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
K + + D EKL + L+ +ID+NYY V AR SNL+HRP+G+G+ G
Sbjct: 617 K----QADGSYALDEEKLKRTVSVAMRMLDNVIDINYYAVAKARNSNLKHRPVGLGIMGF 672
Query: 528 ADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQP 587
D LL P+ S EA + E + Y+A S+E+A G Y +Y GS +GIL
Sbjct: 673 QDCLHLLRTPYASDEAVEFADRSMEAVCYYAYWASTELAEERGRYSSYRGSLWDRGILPQ 732
Query: 588 DMWG-----------VNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
D V+ S DW LR I G+RNS VA PTA+ S I+G + C
Sbjct: 733 DTLKLLTEARGGYVEVDTSATLDWPALRARIDSFGMRNSNCVAIAPTATISNIIGVSACI 792
Query: 637 EPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELK 696
EP N+Y + LSGEF VVN++L+ DL E GLW ++ + Y DG + +I +IP +L+
Sbjct: 793 EPTFQNLYVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADLR 852
Query: 697 AIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMY 756
AIY T +E+ K LV+ A R +ID +QSLNI+M + KL ++ AWLRGLKT Y
Sbjct: 853 AIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDEVYKLAWLRGLKT-TY 911
Query: 757 YLRSRAAADAIKFTVDTSVLKENP 780
YLR+ AA K TV L P
Sbjct: 912 YLRTMAATHVEKSTVAHGALNAVP 935
>gi|53720600|ref|YP_109586.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei K96243]
gi|53726101|ref|YP_104056.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
mallei ATCC 23344]
gi|67643594|ref|ZP_00442339.1| ribonucleoside-diphosphate reductase alpha subunit (Ribonucleotide
reductase) [Burkholderia mallei GB8 horse 4]
gi|76810342|ref|YP_334882.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 1710b]
gi|121601276|ref|YP_991781.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
mallei SAVP1]
gi|124384186|ref|YP_001027274.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
mallei NCTC 10229]
gi|126439753|ref|YP_001060485.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 668]
gi|126448585|ref|YP_001082789.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
mallei NCTC 10247]
gi|126454560|ref|YP_001067749.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 1106a]
gi|134280283|ref|ZP_01766994.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei 305]
gi|166998594|ref|ZP_02264452.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
mallei PRL-20]
gi|167825889|ref|ZP_02457360.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 9]
gi|217420768|ref|ZP_03452273.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei 576]
gi|226196789|ref|ZP_03792368.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei Pakistan 9]
gi|237813880|ref|YP_002898331.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei MSHR346]
gi|242315545|ref|ZP_04814561.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei 1106b]
gi|254178878|ref|ZP_04885532.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
mallei ATCC 10399]
gi|254180585|ref|ZP_04887183.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei 1655]
gi|254190978|ref|ZP_04897484.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei Pasteur 52237]
gi|254199123|ref|ZP_04905538.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei S13]
gi|254202775|ref|ZP_04909138.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
mallei FMH]
gi|254208117|ref|ZP_04914467.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
mallei JHU]
gi|254257988|ref|ZP_04949042.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei 1710a]
gi|254299328|ref|ZP_04966778.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei 406e]
gi|386860430|ref|YP_006273379.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 1026b]
gi|403520184|ref|YP_006654318.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei BPC006]
gi|418538893|ref|ZP_13104494.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 1026a]
gi|418539663|ref|ZP_13105246.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 1258a]
gi|418545913|ref|ZP_13111151.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 1258b]
gi|418552364|ref|ZP_13117229.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 354e]
gi|52211014|emb|CAH37002.1| putative ribonucleoside reductase [Burkholderia pseudomallei
K96243]
gi|52429524|gb|AAU50117.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
mallei ATCC 23344]
gi|76579795|gb|ABA49270.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei 1710b]
gi|121230086|gb|ABM52604.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
mallei SAVP1]
gi|124292206|gb|ABN01475.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
mallei NCTC 10229]
gi|126219246|gb|ABN82752.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei 668]
gi|126228202|gb|ABN91742.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei 1106a]
gi|126241455|gb|ABO04548.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
mallei NCTC 10247]
gi|134248290|gb|EBA48373.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei 305]
gi|147747022|gb|EDK54099.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
mallei FMH]
gi|147752011|gb|EDK59078.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
mallei JHU]
gi|157809187|gb|EDO86357.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei 406e]
gi|157938652|gb|EDO94322.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei Pasteur 52237]
gi|160694792|gb|EDP84800.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
mallei ATCC 10399]
gi|169656953|gb|EDS88350.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei S13]
gi|184211124|gb|EDU08167.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei 1655]
gi|217396180|gb|EEC36197.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei 576]
gi|225931049|gb|EEH27057.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei Pakistan 9]
gi|237505593|gb|ACQ97911.1| ribonucleoside-diphosphate reductase subunit alpha (Ribonucleotide
reductase) [Burkholderia pseudomallei MSHR346]
gi|238524966|gb|EEP88396.1| ribonucleoside-diphosphate reductase alpha subunit (Ribonucleotide
reductase) [Burkholderia mallei GB8 horse 4]
gi|242138784|gb|EES25186.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei 1106b]
gi|243065277|gb|EES47463.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
mallei PRL-20]
gi|254216677|gb|EET06061.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
pseudomallei 1710a]
gi|385346574|gb|EIF53249.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 1026a]
gi|385364108|gb|EIF69851.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 1258a]
gi|385365931|gb|EIF71584.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 1258b]
gi|385373198|gb|EIF78264.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 354e]
gi|385657558|gb|AFI64981.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei 1026b]
gi|403075827|gb|AFR17407.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei BPC006]
Length = 995
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 322/804 (40%), Positives = 447/804 (55%), Gaps = 52/804 (6%)
Query: 4 VKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAET 63
V +G A+ + + A + GL + P + + +Y GV +Q+ + +
Sbjct: 157 VTDNGVTRALDLNALRALIVSACEGLG-DAVSPEPIVAETVKNLYDGVPMTQVYDSSILA 215
Query: 64 AAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETI--KDMYNHYNE------RSGLKAPL 115
A M P Y+ + ARI+ LH ++ E + +M Y E + G++A L
Sbjct: 216 ARTMIEKDPAYSQVTARIL---LHTIRREILGEEVTQAEMTTRYAEYFPQFLKRGVEAEL 272
Query: 116 IADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVA 175
+ D + +K RL + RD + Y G +TL Y L V G +E PQ MRVA
Sbjct: 273 LDDKLLQFDLK---RLGDALDASRDLQFGYLGLQTLYDRYFLHVDGTRIEMPQAFFMRVA 329
Query: 176 VGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIY 232
+G+ ++ID AI+ Y+++S F ++PTLFN+GT R+QLSSC+L + DD ++GIY
Sbjct: 330 MGLALNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTVADD-LDGIY 388
Query: 233 DTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGK 292
+ LK+ A++SK AGG+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG K
Sbjct: 389 EALKDNALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-K 447
Query: 293 RKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFC 352
RKGA YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV W+LF
Sbjct: 448 RKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGADWTLFS 507
Query: 353 PNEAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQIETGTPYMLF 407
P+ P L D +G EFE Y YE+ E K K + AQ LW ++L ETG P++ F
Sbjct: 508 PSTCPDLHDKFGAEFEAAYVGYEEKVARGEIKLFKKIPAQQLWRKMLGMLFETGHPWITF 567
Query: 408 KDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPS 467
KD CN +S QQ++G + SSNLCTE+ TS TE AVCNL S+ L +H +
Sbjct: 568 KDPCNVRSPQQHVGVVHSSNLCTEITLNTSDTEIAVCNLGSVNLV-----------AHLA 616
Query: 468 KLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
K + + D EKL + L+ +ID+NYY V AR SNL+HRP+G+G+ G
Sbjct: 617 K----QADGSYALDEEKLKRTVSVAMRMLDNVIDINYYAVAKARNSNLKHRPVGLGIMGF 672
Query: 528 ADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQP 587
D LL P+ S EA + E + Y+A S+E+A G Y +Y GS +GIL
Sbjct: 673 QDCLHLLRTPYASDEAVEFADRSMEAVCYYAYWASTELAEERGRYSSYRGSLWDRGILPQ 732
Query: 588 DMWG-----------VNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
D V+ S DW LR I G+RNS VA PTA+ S I+G + C
Sbjct: 733 DTLKLLTEARGGYVEVDTSATLDWPALRARIDSFGMRNSNCVAIAPTATISNIIGVSACI 792
Query: 637 EPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELK 696
EP N+Y + LSGEF VVN++L+ DL E GLW ++ + Y DG + +I +IP +L+
Sbjct: 793 EPTFQNLYVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADLR 852
Query: 697 AIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMY 756
AIY T +E+ K LV+ A R +ID +QSLNI+M + KL ++ AWLRGLKT Y
Sbjct: 853 AIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDEVYKLAWLRGLKT-TY 911
Query: 757 YLRSRAAADAIKFTVDTSVLKENP 780
YLR+ AA K TV L P
Sbjct: 912 YLRTMAATHVEKSTVAHGALNAVP 935
>gi|444364598|ref|ZP_21164888.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
cenocepacia BC7]
gi|444365873|ref|ZP_21165977.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
cenocepacia K56-2Valvano]
gi|443592687|gb|ELT61473.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
cenocepacia BC7]
gi|443605444|gb|ELT73298.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
cenocepacia K56-2Valvano]
Length = 1001
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 315/773 (40%), Positives = 438/773 (56%), Gaps = 53/773 (6%)
Query: 35 DPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSF 94
DP++ + +Y GV SQ+ + A A M P Y+ + ARI+ LH ++
Sbjct: 190 DPIVA--ETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARIL---LHTIRREIL 244
Query: 95 SETI--KDMYNHYNE------RSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYF 146
E + +M Y E + G+ A L+ D + +K RL + +RD + Y
Sbjct: 245 GEEVVQAEMSTRYAEYFPQFLKRGVDAGLLDDKLLQFDLK---RLGEALDANRDLQFGYL 301
Query: 147 GFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASP 203
G +TL Y L V G +E PQ MRVA+G+ ++ID AI+ Y+++S F ++P
Sbjct: 302 GLQTLYDRYFLHVDGTRIEMPQAFFMRVAMGLSLNEIDRETRAIEFYNVLSSFDFMSSTP 361
Query: 204 TLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT R+QLSSC+L + DD ++GIY+ LKE A++SK AGG+G +RA GS+I+
Sbjct: 362 TLFNSGTHRSQLSSCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIK 420
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEH 323
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G +
Sbjct: 421 GTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRR 479
Query: 324 RARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EG 378
R D+ A W+PDLFM+RV W+LF P+ P L D +G +FE+ YT YE E
Sbjct: 480 RTHDMNTANWIPDLFMKRVMEGADWTLFSPSTCPDLHDKFGADFEKAYTAYEDKVARGEI 539
Query: 379 KAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSP 438
K K + AQ LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ TS
Sbjct: 540 KLFKKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSD 599
Query: 439 TETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNK 498
TE AVCNL S+ L ++ + + + D +KL + L+
Sbjct: 600 TEIAVCNLGSVNLVAHLVK---------------QADGSYALDHDKLKRTISVAMRMLDN 644
Query: 499 IIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHA 558
+ID+NYY V AR SNL+HRP+G+G+ G D LL P+ S A + E + Y+A
Sbjct: 645 VIDINYYAVPKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASEAAVEFADRSMEAVCYYA 704
Query: 559 LRTSSEIAAREGPYETYHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRDMI 607
S+E+A G Y +Y GS +GIL D V+ S+ DW LR I
Sbjct: 705 YYASTELAEERGRYSSYRGSLWDRGILPQDTLKLLTEARGGYVEVDTSESLDWTTLRSRI 764
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEM 667
+ +G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L+ DL E
Sbjct: 765 AAHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKER 824
Query: 668 GLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSL 727
GLW ++ + Y DG + +I +IP +L+AIY T +E+ LV+ A R +ID +QSL
Sbjct: 825 GLWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPTWLVEAASRRQKWIDQAQSL 884
Query: 728 NIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
NI+M + KL ++ AWLRGLKT YYLR+ AA K TV L P
Sbjct: 885 NIYMGGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 936
>gi|421867552|ref|ZP_16299210.1| Ribonucleotide reductase of class Ia (aerobic),alpha subunit
[Burkholderia cenocepacia H111]
gi|358072490|emb|CCE50088.1| Ribonucleotide reductase of class Ia (aerobic),alpha subunit
[Burkholderia cenocepacia H111]
Length = 1001
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 315/773 (40%), Positives = 438/773 (56%), Gaps = 53/773 (6%)
Query: 35 DPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSF 94
DP++ + +Y GV SQ+ + A A M P Y+ + ARI+ LH ++
Sbjct: 190 DPIVA--ETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARIL---LHTIRREIL 244
Query: 95 SETI--KDMYNHYNE------RSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYF 146
E + +M Y E + G+ A L+ D + +K RL + +RD + Y
Sbjct: 245 GEEVVQAEMSTRYAEYFPQFLKRGVDAGLLDDKLLQFDLK---RLGEALDANRDLQFGYL 301
Query: 147 GFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASP 203
G +TL Y L V G +E PQ MRVA+G+ ++ID AI+ Y+++S F ++P
Sbjct: 302 GLQTLYDRYFLHVDGTRIEMPQAFFMRVAMGLSLNEIDRETRAIEFYNVLSSFDFMSSTP 361
Query: 204 TLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT R+QLSSC+L + DD ++GIY+ LKE A++SK AGG+G +RA GS+I+
Sbjct: 362 TLFNSGTHRSQLSSCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIK 420
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEH 323
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G +
Sbjct: 421 GTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRR 479
Query: 324 RARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EG 378
R D+ A W+PDLFM+RV W+LF P+ P L D +G +FE+ YT YE E
Sbjct: 480 RTHDMNTANWIPDLFMKRVMEGADWTLFSPSTCPDLHDKFGADFEKAYTAYEDKVARGEI 539
Query: 379 KAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSP 438
K K + AQ LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ TS
Sbjct: 540 KLFKKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSD 599
Query: 439 TETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNK 498
TE AVCNL S+ L ++ + + + D +KL + L+
Sbjct: 600 TEIAVCNLGSVNLVAHLVK---------------QADGSYALDHDKLKRTISVAMRMLDN 644
Query: 499 IIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHA 558
+ID+NYY V AR SNL+HRP+G+G+ G D LL P+ S A + E + Y+A
Sbjct: 645 VIDINYYAVPKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASEAAVEFADRSMEAVCYYA 704
Query: 559 LRTSSEIAAREGPYETYHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRDMI 607
S+E+A G Y +Y GS +GIL D V+ S+ DW LR I
Sbjct: 705 YYASTELAEERGRYSSYRGSLWDRGILPQDTLKLLTEARGGYVEVDTSESLDWTTLRSRI 764
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEM 667
+ +G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L+ DL E
Sbjct: 765 AAHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKER 824
Query: 668 GLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSL 727
GLW ++ + Y DG + +I +IP +L+AIY T +E+ LV+ A R +ID +QSL
Sbjct: 825 GLWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPTWLVEAASRRQKWIDQAQSL 884
Query: 728 NIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
NI+M + KL ++ AWLRGLKT YYLR+ AA K TV L P
Sbjct: 885 NIYMGGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 936
>gi|374370404|ref|ZP_09628408.1| ribonucleotide-diphosphate reductase subunit alpha [Cupriavidus
basilensis OR16]
gi|373098056|gb|EHP39173.1| ribonucleotide-diphosphate reductase subunit alpha [Cupriavidus
basilensis OR16]
Length = 980
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 313/770 (40%), Positives = 436/770 (56%), Gaps = 53/770 (6%)
Query: 34 CDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKN---- 89
+P+L ++ +Y GV +Q+ + A A + P Y+ + ARI++ + K
Sbjct: 187 AEPIL--KETLKNLYDGVPMTQVYDSAILAARTLIEKDPAYSQVTARILLHTIRKEILGA 244
Query: 90 --TKKSFSETIKDMYNHYNERSGLKAPLIADDV--YDIIMKNAARLDSEIIYDRDFDYDY 145
T+ D + + R G++A L+ + + YD+ ARL + + RDF ++Y
Sbjct: 245 EVTQTEMVSRYADYFPKFIAR-GIEAELLDEKLATYDL-----ARLGAALDAQRDFQFNY 298
Query: 146 FGFKTLERSYLLKVQGKVVERPQHMLMRVAVGI---HKDDIDSAIKTYHMMSQRWFTHAS 202
G +TL Y L + +E PQ MRVA+G+ KD AI+ Y ++S F ++
Sbjct: 299 LGLQTLYDRYFLHIDEVRIEMPQAFFMRVAMGLALGEKDREARAIEFYQLLSSFDFMSST 358
Query: 203 PTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYI 262
PTLFN+GT R+QLSSC+L + DD +EGIY+ LKE A++SK AGG+G N+RA GS+I
Sbjct: 359 PTLFNSGTRRSQLSSCYLTTVSDD-LEGIYEALKENALLSKFAGGLGNDWTNVRALGSHI 417
Query: 263 RGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEE 322
+GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G +
Sbjct: 418 KGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDR 476
Query: 323 HRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----E 377
R D+ A W+PDLFM+RV G W+LF P P L D G FE+ Y YE E
Sbjct: 477 RRTHDMNTANWIPDLFMKRVMEAGEWTLFSPATCPDLHDLVGKAFEQAYLGYEAKAARGE 536
Query: 378 GKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTS 437
K K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ T+
Sbjct: 537 LKLFKKIPAMQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTN 596
Query: 438 PTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLN 497
+E AVCNL S+ L +++++ + D KL + L+
Sbjct: 597 ESEIAVCNLGSVNLVAHLKQLA---------------DGTQVLDHAKLEKTVRTAMRMLD 641
Query: 498 KIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYH 557
+ID+NYY VE AR SNLRHRP+G+G+ G D LL +P+ S A Q E + Y+
Sbjct: 642 NVIDINYYAVEKARSSNLRHRPVGMGIMGFQDCLHLLRLPYASDAAVQFADTSMEAVCYY 701
Query: 558 ALRTSSEIAAREGPYETYHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRDM 606
A R SSE+A G Y TY GS +GIL D V+ S DW LR
Sbjct: 702 AYRASSELAEERGRYSTYEGSLWDRGILPQDSLKLLAEERGGYLEVDHSSAMDWDSLRAR 761
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
I ++G+RNS +A PTA+ S I+G + C EP N+Y + LSGEF VVN++L+ DL E
Sbjct: 762 IKQHGMRNSNCIAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKE 821
Query: 667 MGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQS 726
GLW ++ + Y DG + +I +IP++L+ IY T +E++ LV+ A R +ID +QS
Sbjct: 822 RGLWDEVMVADLKYFDGKLARIDRIPQDLRDIYATAFEVEPSWLVEAASRRQKWIDQAQS 881
Query: 727 LNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
LNI+M + KL + AWLRGLKT YYLR+ AA K TV L
Sbjct: 882 LNIYMAGASGKKLDDTYKLAWLRGLKT-TYYLRTMAATHVEKSTVSRGSL 930
>gi|206561766|ref|YP_002232531.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
cenocepacia J2315]
gi|198037808|emb|CAR53752.1| putative ribonucleoside reductase [Burkholderia cenocepacia J2315]
Length = 1003
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 315/773 (40%), Positives = 438/773 (56%), Gaps = 53/773 (6%)
Query: 35 DPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSF 94
DP++ + +Y GV SQ+ + A A M P Y+ + ARI+ LH ++
Sbjct: 192 DPIVA--ETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARIL---LHTIRREIL 246
Query: 95 SETI--KDMYNHYNE------RSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYF 146
E + +M Y E + G+ A L+ D + +K RL + +RD + Y
Sbjct: 247 GEEVVQAEMSTRYAEYFPQFLKRGVDAGLLDDKLLQFDLK---RLGEALDANRDLQFGYL 303
Query: 147 GFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASP 203
G +TL Y L V G +E PQ MRVA+G+ ++ID AI+ Y+++S F ++P
Sbjct: 304 GLQTLYDRYFLHVDGTRIEMPQAFFMRVAMGLSLNEIDRETRAIEFYNVLSSFDFMSSTP 363
Query: 204 TLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT R+QLSSC+L + DD ++GIY+ LKE A++SK AGG+G +RA GS+I+
Sbjct: 364 TLFNSGTHRSQLSSCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIK 422
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEH 323
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G +
Sbjct: 423 GTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRR 481
Query: 324 RARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EG 378
R D+ A W+PDLFM+RV W+LF P+ P L D +G +FE+ YT YE E
Sbjct: 482 RTHDMNTANWIPDLFMKRVMEGADWTLFSPSTCPDLHDKFGADFEKAYTAYEDKVARGEI 541
Query: 379 KAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSP 438
K K + AQ LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ TS
Sbjct: 542 KLFKKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSD 601
Query: 439 TETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNK 498
TE AVCNL S+ L ++ + + + D +KL + L+
Sbjct: 602 TEIAVCNLGSVNLVAHLVK---------------QADGSYALDHDKLKRTISVAMRMLDN 646
Query: 499 IIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHA 558
+ID+NYY V AR SNL+HRP+G+G+ G D LL P+ S A + E + Y+A
Sbjct: 647 VIDINYYAVPKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASEAAVEFADRSMEAVCYYA 706
Query: 559 LRTSSEIAAREGPYETYHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRDMI 607
S+E+A G Y +Y GS +GIL D V+ S+ DW LR I
Sbjct: 707 YYASTELAEERGRYSSYRGSLWDRGILPQDTLKLLTEARGGYVEVDTSESLDWTTLRSRI 766
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEM 667
+ +G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L+ DL E
Sbjct: 767 AAHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKER 826
Query: 668 GLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSL 727
GLW ++ + Y DG + +I +IP +L+AIY T +E+ LV+ A R +ID +QSL
Sbjct: 827 GLWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPTWLVEAASRRQKWIDQAQSL 886
Query: 728 NIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
NI+M + KL ++ AWLRGLKT YYLR+ AA K TV L P
Sbjct: 887 NIYMGGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 938
>gi|171318521|ref|ZP_02907673.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
ambifaria MEX-5]
gi|171096307|gb|EDT41213.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
ambifaria MEX-5]
Length = 1001
Score = 548 bits (1413), Expect = e-153, Method: Compositional matrix adjust.
Identities = 313/773 (40%), Positives = 437/773 (56%), Gaps = 51/773 (6%)
Query: 35 DPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSF 94
+P + + +Y GV SQ+ + A A M P Y+ + ARI+ LH ++
Sbjct: 188 NPEPIVAETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARIL---LHTIRREIL 244
Query: 95 SETI--KDMYNHYNE------RSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYF 146
E + +M Y E + G+ A L+ D + +K RL + +RD + Y
Sbjct: 245 GEEVLQAEMSTRYTEYFPQFLKRGVDAGLLDDKLLQFDLK---RLGEALDANRDLQFGYL 301
Query: 147 GFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASP 203
G +TL Y L V+G +E PQ MRVA+G+ ++ID AI+ Y+++S F ++P
Sbjct: 302 GLQTLYDRYFLHVEGTRIEMPQAFFMRVAMGLSLNEIDRETRAIEFYNVLSSFDFMSSTP 361
Query: 204 TLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT R+QLSSC+L + DD ++GIY+ LKE A++SK AGG+G +RA GS+I+
Sbjct: 362 TLFNSGTHRSQLSSCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIK 420
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEH 323
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G +
Sbjct: 421 GTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRR 479
Query: 324 RARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EG 378
R D+ A W+PDLFM+RV W+LF P+ P L D +G +FE+ YT YE E
Sbjct: 480 RTHDMNTANWIPDLFMKRVMEGADWTLFSPSTCPDLHDKFGADFEKAYTAYEDKVARGEI 539
Query: 379 KAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSP 438
K K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ TS
Sbjct: 540 KLFKKIPAAQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSD 599
Query: 439 TETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNK 498
TE AVCNL S+ L ++ + + + D +KL + L+
Sbjct: 600 TEIAVCNLGSVNLVAHLVK---------------QADGSYALDHDKLKRTISVAMRMLDN 644
Query: 499 IIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHA 558
+ID+NYY V AR SNL+HRP+G+G+ G D LL P+ S A + E + Y+A
Sbjct: 645 VIDINYYAVPKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASEAAVEFADRSMEAVCYYA 704
Query: 559 LRTSSEIAAREGPYETYHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRDMI 607
S+E+A G Y +Y GS +GIL D V+ S+ DW LR I
Sbjct: 705 YHASTELAEERGRYSSYRGSLWDRGILPQDTLKLLAEARGGYVEVDTSESLDWTALRARI 764
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEM 667
+ +G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L+ DL E
Sbjct: 765 AAHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKER 824
Query: 668 GLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSL 727
GLW ++ + Y DG + +I +IP +L+AIY T +E+ LV+ A R +ID +QSL
Sbjct: 825 GLWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPTWLVEAASRRQKWIDQAQSL 884
Query: 728 NIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
NI+M + KL ++ AWLRGLKT YYLR+ AA K TV L P
Sbjct: 885 NIYMGGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 936
>gi|365857691|ref|ZP_09397679.1| ribonucleoside-diphosphate reductase, alpha subunit
[Acetobacteraceae bacterium AT-5844]
gi|363715878|gb|EHL99300.1| ribonucleoside-diphosphate reductase, alpha subunit
[Acetobacteraceae bacterium AT-5844]
Length = 947
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 318/816 (38%), Positives = 462/816 (56%), Gaps = 69/816 (8%)
Query: 28 GLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIV----- 82
GL+ +PVL + +Y G+++ +L + A + P+YA ++AR++
Sbjct: 163 GLADVFPEPVLTEAR--RNLYDGISSEELSQALILAARTLIEQEPNYAYVSARLLLAVAR 220
Query: 83 ------VSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV--YDIIMKNAARLDSE 134
V + T+ + D + Y + G++A L+ ++ +D+ ARL +
Sbjct: 221 REATGFVQGIAVQTQAEMATAYPDYFTAYVGK-GIEAQLLNPELARFDL-----ARLGAA 274
Query: 135 IIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYH 191
+ +RD + Y GF+TL YLL+ QG E PQ MRVA+G+ ++ID AI+ Y
Sbjct: 275 LKPERDLQFQYLGFQTLYDRYLLQTQGVRFEMPQAFFMRVAMGLALNEIDREERAIEFYD 334
Query: 192 MMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVS 251
++S F ++PTLFN+GT +QLSSCFL + DD ++GI+ +K+ A+++K +GGIG S
Sbjct: 335 LISSFDFMCSTPTLFNSGTRHSQLSSCFLTSVPDD-LDGIFGAIKDNALLAKYSGGIGNS 393
Query: 252 VHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEF 311
+R G++IRGTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH D+ EF
Sbjct: 394 WTRVRGLGAHIRGTNGQSQGVVPFLKVANDTAIAVNQGG-KRKGAVCAYLETWHIDVEEF 452
Query: 312 LDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLY 371
LDLRKN G + R D+ A WVPDLFM+RV+++G W+LF P+E P L + +G F+ Y
Sbjct: 453 LDLRKNTGDDRRRTHDMNTANWVPDLFMQRVEADGEWTLFSPDEVPDLHNLYGIPFKEAY 512
Query: 372 TKYEKEGKA-----KKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSS 426
+YE + KA K V+A +LW +L ETG P+M FKD CN +S Q++ G + SS
Sbjct: 513 ERYEAKAKAGEIKVHKTVRAVDLWRRMLTMLFETGHPWMTFKDPCNLRSPQRHAGVVHSS 572
Query: 427 NLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLA 486
NLCTE+ TS +E AVCNL SI L R+V E G+ D E+LA
Sbjct: 573 NLCTEITLNTSDSEVAVCNLGSINLGRHVTEKGL--------------------DRERLA 612
Query: 487 EVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQL 546
L+ +IDVN+Y + ARRSNLRHRPIG+G+ G D L +P S EA +
Sbjct: 613 RTVRTAMRMLDNVIDVNFYTIPQARRSNLRHRPIGMGLMGFQDALHALRLPLASEEAVRF 672
Query: 547 NKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMW---------GVNPSDR 597
+ E I Y+A+ S ++AA G Y ++ GS S+G+L D ++ S
Sbjct: 673 ADESMEVISYYAIEASVDLAAERGAYASFQGSLWSQGVLPVDSIRYVAEARGETLDQSTT 732
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
DW LR+ + G+RNS +A PTA+ S I+G + EP N+Y + +SG+F VVN
Sbjct: 733 MDWESLRERVKTIGMRNSNTMAIAPTATISNIVGATQSIEPTFRNLYVKANMSGDFTVVN 792
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
L+ DL GLW ++ + + Y DGS+ I +IP++LK +Y T +E+ LV+ A R
Sbjct: 793 PALVADLKARGLWDAVMVSDLKYYDGSLGPIDRIPDDLKDLYATAFEVDASWLVEAAARR 852
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK 777
+ID +QSLN+++ PN KL +L+ AW RGLKT YYLR+++A K T+ S K
Sbjct: 853 QKWIDQAQSLNLYLANPNGRKLDALYRLAWKRGLKT-TYYLRTQSATHVEKSTLKKSDGK 911
Query: 778 ENP-KVTDDDDAKM------AQMVCSLTNREECMAC 806
N KV ++ A VC L + C AC
Sbjct: 912 LNAVKVAPQPESAFEATPLDAPKVCMLDD-PTCEAC 946
>gi|167904348|ref|ZP_02491553.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
pseudomallei NCTC 13177]
Length = 956
Score = 548 bits (1412), Expect = e-153, Method: Compositional matrix adjust.
Identities = 321/804 (39%), Positives = 446/804 (55%), Gaps = 52/804 (6%)
Query: 4 VKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAET 63
V +G + + + A + GL + P + + +Y GV +Q+ + +
Sbjct: 157 VTDNGVTRTLDLNALRALIVSACEGLG-DAVSPEPIVAETVKNLYDGVPMTQVYDSSILA 215
Query: 64 AAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETI--KDMYNHYNE------RSGLKAPL 115
A M P Y+ + ARI+ LH ++ E + +M Y E + G++A L
Sbjct: 216 ARTMIEKDPAYSQVTARIL---LHTIRREILGEEVTQAEMTTRYAEYFPQFLKRGVEAEL 272
Query: 116 IADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVA 175
+ D + +K RL + RD + Y G +TL Y L V G +E PQ MRVA
Sbjct: 273 LDDKLLQFDLK---RLGDALDASRDLQFGYLGLQTLYDRYFLHVDGTRIEMPQAFFMRVA 329
Query: 176 VGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIY 232
+G+ ++ID AI+ Y+++S F ++PTLFN+GT R+QLSSC+L + DD ++GIY
Sbjct: 330 MGLALNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTVADD-LDGIY 388
Query: 233 DTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGK 292
+ LK+ A++SK AGG+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG K
Sbjct: 389 EALKDNALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-K 447
Query: 293 RKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFC 352
RKGA YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV W+LF
Sbjct: 448 RKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGADWTLFS 507
Query: 353 PNEAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQIETGTPYMLF 407
P+ P L D +G EFE Y YE+ E K K + AQ LW ++L ETG P++ F
Sbjct: 508 PSTCPDLHDKFGAEFEAAYVGYEEKVARGEIKLFKKIPAQQLWRKMLGMLFETGHPWITF 567
Query: 408 KDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPS 467
KD CN +S QQ++G + SSNLCTE+ TS TE AVCNL S+ L +H +
Sbjct: 568 KDPCNVRSPQQHVGVVHSSNLCTEITLNTSDTEIAVCNLGSVNLV-----------AHLA 616
Query: 468 KLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
K + + D EKL + L+ +ID+NYY V AR SNL+HRP+G+G+ G
Sbjct: 617 K----QADGSYALDEEKLKRTVSVAMRMLDNVIDINYYAVAKARNSNLKHRPVGLGIMGF 672
Query: 528 ADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQP 587
D LL P+ S EA + E + Y+A S+E+A G Y +Y GS +GIL
Sbjct: 673 QDCLHLLRTPYASDEAVEFADRSMEAVCYYAYWASTELAEERGRYSSYRGSLWDRGILPQ 732
Query: 588 DMWG-----------VNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
D V+ S DW LR I G+RNS VA PTA+ S I+G + C
Sbjct: 733 DTLKLLTEARGGYVEVDTSATLDWPALRARIDSFGMRNSNCVAIAPTATISNIIGVSACI 792
Query: 637 EPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELK 696
EP N+Y + LSGEF VVN++L+ DL E GLW ++ + Y DG + +I +IP +L+
Sbjct: 793 EPTFQNLYVKSNLSGEFTVVNEYLVRDLKERGLWDEVMVADLKYFDGMLSRIDRIPADLR 852
Query: 697 AIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMY 756
AIY T +E+ K LV+ A R +ID +QSLNI+M + KL ++ AWLRGLKT Y
Sbjct: 853 AIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDEVYKLAWLRGLKT-TY 911
Query: 757 YLRSRAAADAIKFTVDTSVLKENP 780
YLR+ AA K TV L P
Sbjct: 912 YLRTMAATHVEKSTVAHGALNAVP 935
>gi|85714831|ref|ZP_01045817.1| ribonucleotide-diphosphate reductase alpha subunit [Nitrobacter sp.
Nb-311A]
gi|85698317|gb|EAQ36188.1| ribonucleotide-diphosphate reductase alpha subunit [Nitrobacter sp.
Nb-311A]
Length = 956
Score = 548 bits (1411), Expect = e-153, Method: Compositional matrix adjust.
Identities = 308/756 (40%), Positives = 427/756 (56%), Gaps = 58/756 (7%)
Query: 47 VYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKN------------TKKSF 94
+Y G++ +L A + PDYA +AR+++ L + T+
Sbjct: 182 LYDGISVDELALAPILAARTLVETDPDYAKASARLLLDKLRREALSFVSGRSEQATQAEM 241
Query: 95 SETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERS 154
+E D + Y R+G+ L+ +I + RL + + +RD +DY G +TL
Sbjct: 242 AERYADYFRAY-VRTGIDNELLD---LEIGRFDLDRLAAALKPERDLRFDYLGLQTLYDR 297
Query: 155 YLLKVQGKVVERPQHMLMRVAVGIHKDDID---SAIKTYHMMSQRWFTHASPTLFNAGTP 211
Y L V+G E PQ MRVA G+ +ID AI Y ++S F ++PTLFNAGT
Sbjct: 298 YFLHVRGVRFELPQAFFMRVACGLALREIDREEKAIAFYDLLSSFDFMASTPTLFNAGTL 357
Query: 212 RAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNG 271
R QLSSCFL + DD ++GI+ +K+ A++SK AGG+G +R G++I+GTNG S G
Sbjct: 358 RPQLSSCFLTTVADD-LDGIFKAIKDNALLSKYAGGLGNDWTRVRGLGAHIKGTNGESQG 416
Query: 272 IVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYA 331
+VP L+V NDTA V+QGG KRKGA YLE WH DI EFLDLRKN G + R D+ A
Sbjct: 417 VVPFLKVANDTAIAVNQGG-KRKGAVCAYLETWHIDIEEFLDLRKNTGDDRRRTHDMNTA 475
Query: 332 LWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQA 386
WVPDLFM RV+ +G+W+LF P+E P L D G F Y YE+ E + K V+A
Sbjct: 476 NWVPDLFMRRVEEDGMWTLFSPDETPDLHDLTGKAFTERYACYEEKAARGELRVTKQVRA 535
Query: 387 QNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNL 446
+LW +L ETG P++ FKD CN +S QQ+ G + SSNLCTE+ TS TE AVCNL
Sbjct: 536 VDLWRRMLTMLFETGHPWITFKDPCNLRSPQQHCGVVHSSNLCTEITLNTSNTEVAVCNL 595
Query: 447 ASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYP 506
S+ L ++ K+ D E LA I L+ ++DVN+Y
Sbjct: 596 GSVNLVSHI--------------------KDGKLDHEHLARTVRIAMRMLDNVLDVNFYT 635
Query: 507 VETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIA 566
+ AR SNLRHRP+G+GV G D +L +P+ S A + E I Y+A+ S E+A
Sbjct: 636 IPEARTSNLRHRPVGLGVMGFQDALNILRLPYASNGAVSFADESMEAIAYYAISGSVELA 695
Query: 567 AREGPYETYHGSPVSKGILQPDMW-----------GVNPSDRWDWGGLRDMISKNGVRNS 615
A G Y +Y GS SKGIL D ++ S R DW LR+ + G+RNS
Sbjct: 696 AERGRYPSYQGSLWSKGILPLDSLTLVDEARGAAVDIDRSSRLDWDSLRESVMTIGMRNS 755
Query: 616 LLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIK 675
+A PTA+ S I G ++ EP N+Y + +SG+F VVN HL+ DL GLW ++
Sbjct: 756 NCMAIAPTATISNICGVSQSIEPAYQNLYVKSNMSGDFTVVNAHLVRDLKARGLWDEVMI 815
Query: 676 NKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPN 735
+ + Y DGSV +I ++P++LKA+Y T +EI L+D A R +ID +QSLN+++ P+
Sbjct: 816 SDLKYFDGSVGQIDRVPDDLKALYATAFEIDSSWLIDAAARRQKWIDQAQSLNLYIANPS 875
Query: 736 FGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTV 771
KL +L+ HAW RGLKT YYLRSR+A K T+
Sbjct: 876 GKKLDALYRHAWKRGLKT-TYYLRSRSATHVEKSTL 910
>gi|167564162|ref|ZP_02357078.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
oklahomensis EO147]
Length = 953
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 313/770 (40%), Positives = 435/770 (56%), Gaps = 47/770 (6%)
Query: 36 PVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKN------ 89
P + + +Y GV +Q+ + A A M P Y+ + ARI++ + +
Sbjct: 188 PEPIVSETVKNLYDGVPMTQVYDSAILAARTMIEKDPAYSQVTARILLHTIRREILGEEV 247
Query: 90 TKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFK 149
T+ S + + + +R G++A L+ D + +K RL + RD + Y G +
Sbjct: 248 TQAEMSMRYAEYFPQFLKR-GVEAELLDDKLLQFDLK---RLGDALDASRDLQFGYLGLQ 303
Query: 150 TLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASPTLF 206
TL Y L V G +E PQ MRVA+G+ ++ID AI+ Y+++S F ++PTLF
Sbjct: 304 TLYDRYFLHVDGTRIEMPQAFFMRVAMGLALNEIDREARAIEFYNVLSSFDFMSSTPTLF 363
Query: 207 NAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTN 266
N+GT R+QLSSC+L + DD ++GIY+ LK+ A++SK AGG+G +RA GS+I+GTN
Sbjct: 364 NSGTRRSQLSSCYLTTVADD-LDGIYEALKDNALLSKFAGGLGNDWTRVRALGSHIKGTN 422
Query: 267 GTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRAR 326
G S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R
Sbjct: 423 GKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTH 481
Query: 327 DLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EGKAK 381
D+ A W+PDLFM+RV W+LF P+ P L D +G EFE Y YE+ E K
Sbjct: 482 DMNTANWIPDLFMKRVMEGADWTLFSPSTCPDLHDKFGAEFEAAYVGYEEKVARGEIKLF 541
Query: 382 KVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTET 441
K + AQ LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ TS TE
Sbjct: 542 KKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDTEI 601
Query: 442 AVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIID 501
AVCNL S+ L +H +K + + D EKL G+ L+ +ID
Sbjct: 602 AVCNLGSVNLV-----------AHLAK----QADGSYALDQEKLKRTVGVAMRMLDNVID 646
Query: 502 VNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRT 561
+NYY V AR SNL+HRP+G+G+ G D LL P+ S A + E + Y+A
Sbjct: 647 INYYAVAKARNSNLKHRPVGLGIMGFQDCLHLLRTPYASEAAVEFADRSMEAVCYYAYYA 706
Query: 562 SSEIAAREGPYETYHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRDMISKN 610
S+E+A G Y +Y GS +GIL D V+ S DW LR I
Sbjct: 707 STELAEERGRYSSYRGSLWDRGILPQDTLKLLTEARGGYVEVDTSATLDWPVLRARIDSF 766
Query: 611 GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLW 670
G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L+ DL E GLW
Sbjct: 767 GMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKERGLW 826
Query: 671 SPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIH 730
++ + Y DG + +I ++P +L+AIY T +E+ K LV+ A R +ID +QSLNI+
Sbjct: 827 DEVMVADLKYFDGMLSRIDRVPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIY 886
Query: 731 MDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
M + KL ++ AWLRGLKT YYLR+ AA K TV L P
Sbjct: 887 MGGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 935
>gi|167574514|ref|ZP_02367388.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
oklahomensis C6786]
Length = 944
Score = 547 bits (1409), Expect = e-152, Method: Compositional matrix adjust.
Identities = 313/770 (40%), Positives = 435/770 (56%), Gaps = 47/770 (6%)
Query: 36 PVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKN------ 89
P + + +Y GV +Q+ + A A M P Y+ + ARI++ + +
Sbjct: 188 PEPIVSETVKNLYDGVPMTQVYDSAILAARTMIEKDPAYSQVTARILLHTIRREILGEEV 247
Query: 90 TKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFK 149
T+ S + + + +R G++A L+ D + +K RL + RD + Y G +
Sbjct: 248 TQAEMSMRYAEYFPQFLKR-GVEAELLDDKLLQFDLK---RLGDALDASRDLQFGYLGLQ 303
Query: 150 TLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASPTLF 206
TL Y L V G +E PQ MRVA+G+ ++ID AI+ Y+++S F ++PTLF
Sbjct: 304 TLYDRYFLHVDGTRIEMPQAFFMRVAMGLALNEIDREARAIEFYNVLSSFDFMSSTPTLF 363
Query: 207 NAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTN 266
N+GT R+QLSSC+L + DD ++GIY+ LK+ A++SK AGG+G +RA GS+I+GTN
Sbjct: 364 NSGTRRSQLSSCYLTTVADD-LDGIYEALKDNALLSKFAGGLGNDWTRVRALGSHIKGTN 422
Query: 267 GTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRAR 326
G S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R
Sbjct: 423 GKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTH 481
Query: 327 DLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EGKAK 381
D+ A W+PDLFM+RV W+LF P+ P L D +G EFE Y YE+ E K
Sbjct: 482 DMNTANWIPDLFMKRVMEGADWTLFSPSTCPDLHDKFGAEFEAAYVGYEEKVARGEIKLF 541
Query: 382 KVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTET 441
K + AQ LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ TS TE
Sbjct: 542 KKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDTEI 601
Query: 442 AVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIID 501
AVCNL S+ L +H +K + + D EKL G+ L+ +ID
Sbjct: 602 AVCNLGSVNLV-----------AHLAK----QADGSYALDQEKLKRTVGVAMRMLDNVID 646
Query: 502 VNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRT 561
+NYY V AR SNL+HRP+G+G+ G D LL P+ S A + E + Y+A
Sbjct: 647 INYYAVAKARNSNLKHRPVGLGIMGFQDCLHLLRTPYASEAAVEFADRSMEAVCYYAYYA 706
Query: 562 SSEIAAREGPYETYHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRDMISKN 610
S+E+A G Y +Y GS +GIL D V+ S DW LR I
Sbjct: 707 STELAEERGRYSSYRGSLWDRGILPQDTLKLLTEARGGYVEVDTSATLDWPVLRARIDSF 766
Query: 611 GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLW 670
G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L+ DL E GLW
Sbjct: 767 GMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKERGLW 826
Query: 671 SPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIH 730
++ + Y DG + +I ++P +L+AIY T +E+ K LV+ A R +ID +QSLNI+
Sbjct: 827 DEVMVADLKYFDGMLSRIDRVPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIY 886
Query: 731 MDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
M + KL ++ AWLRGLKT YYLR+ AA K TV L P
Sbjct: 887 MGGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 935
>gi|170695323|ref|ZP_02886469.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
graminis C4D1M]
gi|170139723|gb|EDT07905.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
graminis C4D1M]
Length = 1001
Score = 547 bits (1409), Expect = e-152, Method: Compositional matrix adjust.
Identities = 309/755 (40%), Positives = 431/755 (57%), Gaps = 47/755 (6%)
Query: 47 VYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKN------TKKSFSETIKD 100
+Y GV SQ+ + A A M P Y+ + ARI++ + + T+ E +
Sbjct: 195 LYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARILLHTIRREILEEEVTQAEMGERYAE 254
Query: 101 MYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQ 160
+ + +R G++A L+ D + +K RL + + +RD + Y G +TL Y L
Sbjct: 255 YFPQFIKR-GVQAELLDDKLLQFDLK---RLGAALDNNRDLQFGYLGLQTLYDRYFLHHD 310
Query: 161 GKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSS 217
G +E PQ MRVA+G+ ++ID AI+ Y+++S F ++PTLFN+GT R+QLSS
Sbjct: 311 GVRIEMPQAFFMRVAMGLSLNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTRRSQLSS 370
Query: 218 CFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLR 277
C+L + DD ++GIY+ LKE A++SK AGG+G +RA GS+I+GTNG S G+VP L+
Sbjct: 371 CYLTTV-DDDLDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLK 429
Query: 278 VFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDL 337
V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R D+ A W+PDL
Sbjct: 430 VVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDL 488
Query: 338 FMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFE 392
FM+RV G W+LF P+ P L D +G EFE YT YE E K K V A LW +
Sbjct: 489 FMKRVMEGGDWTLFSPSTCPDLHDKFGAEFEAAYTAYEDKVARGEIKLFKKVPAAQLWRK 548
Query: 393 ILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALP 452
+L ETG P++ FKD CN +S QQ++G + SSNLCTE+ TS E AVCNL S+ L
Sbjct: 549 MLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDAEIAVCNLGSVNLV 608
Query: 453 RYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARR 512
+++E + D +KL + L+ +ID+NYY V AR
Sbjct: 609 AHLKE---------------QADGTLVLDHDKLKRTVSVAMRMLDNVIDINYYAVAKARN 653
Query: 513 SNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPY 572
SNL+HRP+G+G+ G D LL P+ S EA + E + Y+A S+E+A G Y
Sbjct: 654 SNLKHRPVGMGIMGFQDCLHLLRTPYASEEAVKFADTSMEAVCYYAYYASTELAQERGRY 713
Query: 573 ETYHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRDMISKNGVRNSLLVAPM 621
+Y GS +GIL D V+ S+ DW LR I+ G+RNS +A
Sbjct: 714 SSYRGSLWDRGILPQDSVKLLADARGGYVEVDSSESMDWTELRQRIATYGMRNSNCIAIA 773
Query: 622 PTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYD 681
PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL GLW ++ + Y
Sbjct: 774 PTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNDYLVRDLKARGLWDEVMVADLKYF 833
Query: 682 DGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTS 741
DG++ +I +IP +L+AIY T +E+ K LV+ A R +ID +QSLNI+M + KL
Sbjct: 834 DGTLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIYMGGASGKKLDE 893
Query: 742 LHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
++ AW+RGLKT YYLR+ AA K TV L
Sbjct: 894 IYKLAWVRGLKT-TYYLRTMAATHVEKSTVAHGAL 927
>gi|312795098|ref|YP_004028020.1| ribonucleoside-diphosphate reductase subunit alpha [Burkholderia
rhizoxinica HKI 454]
gi|312166873|emb|CBW73876.1| Ribonucleoside-diphosphate reductase alpha chain (EC 1.17.4.1)
[Burkholderia rhizoxinica HKI 454]
Length = 1046
Score = 546 bits (1408), Expect = e-152, Method: Compositional matrix adjust.
Identities = 318/791 (40%), Positives = 447/791 (56%), Gaps = 58/791 (7%)
Query: 18 ITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASL 77
ITA L +S E P++ + +Y GV SQ+ + A A M P Y+ +
Sbjct: 227 ITAACDGLGEAVSAE---PIVA--ETVKNLYDGVPLSQVYDSAILAARTMIEKEPAYSQV 281
Query: 78 AARIVVSNLHKNTKKSFSETI--KDMYNHYNE------RSGLKAPLIADDVYDIIMKNAA 129
AR++ LH ++ E + +M Y E + G++A L+ + + +K
Sbjct: 282 TARLL---LHTIRREILGEEVLQSEMGARYAEYFPQFLKRGVEAELLDEKLLQFDLK--- 335
Query: 130 RLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---A 186
+L + RD + Y G +TL Y L V G+ +E PQ MRVA+G+ ++ID A
Sbjct: 336 KLGDALDASRDLKFGYLGLQTLYDRYFLHVDGQRIEMPQAFFMRVAMGLALNEIDREARA 395
Query: 187 IKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAG 246
I+ Y+++S F ++PTLFN+GT R+QLSSC+L + DD +EGIY+ LKE A++SK AG
Sbjct: 396 IEFYNVLSTFDFMSSTPTLFNSGTRRSQLSSCYLTTVADD-LEGIYEALKENALLSKFAG 454
Query: 247 GIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHA 306
G+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH
Sbjct: 455 GLGNDWTRVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHL 513
Query: 307 DIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTE 366
DI EFL+LRKN G + R D+ A W+PDLFM+RV G W+LF P+ P L D +G E
Sbjct: 514 DIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVIEGGDWTLFSPSSCPDLHDKFGAE 573
Query: 367 FERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLG 421
FE+ Y YE+ E K K + A LW ++L ETG P++ FKD C +S QQ++G
Sbjct: 574 FEQAYVAYEEKAARGELKLFKKIPAAQLWRKMLGMLFETGHPWITFKDPCXVRSPQQHVG 633
Query: 422 TIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRY-F 480
+ SSNLCTE+ TS E AVCNL S+ L ++++ G+ Y
Sbjct: 634 VVHSSNLCTEITLNTSDNEIAVCNLGSVNLVAHMKQ----------------GADXGYVL 677
Query: 481 DFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDS 540
D +KL + L+ +ID+NYY V AR SNL+HRP+G+G+ G D LL P+ S
Sbjct: 678 DHDKLKRTISVAMRMLDNVIDINYYAVAKARNSNLKHRPVGMGIMGFQDCLHLLRTPYAS 737
Query: 541 TEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWG--------- 591
+A + E I Y+A S+E+A+ G Y +Y GS +GIL D
Sbjct: 738 QQAVEFADRSMEAICYYAYWASTELASERGRYSSYRGSLWDRGILPQDTLKLLADSRGGY 797
Query: 592 --VNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVL 649
V+ S+ DW LR+ I+ +G+RNS VA PTA+ S I+G + C EP N+Y + L
Sbjct: 798 VEVDSSETMDWAALRERIATHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNL 857
Query: 650 SGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKT 709
SGEF VVN++L+ DL GLW ++ + Y DGS+ +I +IP +L+ Y T +E+ K
Sbjct: 858 SGEFTVVNEYLVRDLKARGLWDEVMVADLKYFDGSLARIDRIPADLRETYATAFEVDPKW 917
Query: 710 LVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKF 769
LV+ A R +ID +QSLNI+M + KL ++ AWLRGLKT YYLR+ AA K
Sbjct: 918 LVEAAARRQKWIDQAQSLNIYMAGASGKKLDEIYKLAWLRGLKT-TYYLRTIAATHVEKS 976
Query: 770 TVDTSVLKENP 780
TV L P
Sbjct: 977 TVAHGALNAVP 987
>gi|388566435|ref|ZP_10152880.1| ribonucleotide-diphosphate reductase subunit alpha [Hydrogenophaga
sp. PBC]
gi|388266449|gb|EIK91994.1| ribonucleotide-diphosphate reductase subunit alpha [Hydrogenophaga
sp. PBC]
Length = 966
Score = 546 bits (1408), Expect = e-152, Method: Compositional matrix adjust.
Identities = 310/795 (38%), Positives = 453/795 (56%), Gaps = 51/795 (6%)
Query: 8 GKQEAVHFDKITARLKKLSYGLSIE-HCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAA 66
G++ + D +T + GL + DP++ K +Y GV ++ + A A
Sbjct: 155 GQRVPLDIDALTRLITDACAGLGADVKADPIVAETK--RNLYDGVPIDEVYKAAILAART 212
Query: 67 MTTNHPDYASLAARIVVSNLHKNT------KKSFSETIKDMYNHYNERSGLKAPLIADDV 120
+ PDY AR+++ + + + + D + + ++ G+ A L+ D
Sbjct: 213 LIEKDPDYTYATARLLLHTIVREILGAEVPQAEMGQRYADYFPQFIQK-GVDAELLNPD- 270
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
++ + RL + + +RD +DY G +TL Y L V+ +E PQ MRVA+G+
Sbjct: 271 --MLQFDLTRLGAALKPERDLQFDYLGLQTLYDRYFLHVRKSRIELPQAFFMRVAMGLSL 328
Query: 181 DDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKE 237
++ID AI+ Y ++S F ++PTLFN+GT R+QLSSC+L + DD ++GIY+++KE
Sbjct: 329 NEIDREARAIEFYEILSTFDFMSSTPTLFNSGTLRSQLSSCYLTTVPDD-LDGIYESIKE 387
Query: 238 CAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAF 297
A++SK AGG+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG KRKGA
Sbjct: 388 NALLSKFAGGLGNDWTRVRALGSHIKGTNGESQGVVPFLKVVNDTAVAVNQGG-KRKGAV 446
Query: 298 AVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAP 357
YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV G WSLF P+ P
Sbjct: 447 CTYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVLEKGEWSLFSPSNTP 506
Query: 358 GLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCN 412
L D +GT+FE+ Y YE+ E K + V A +LW ++L ETG P++ FKD CN
Sbjct: 507 DLHDKFGTDFEKAYVAYEEKAARGEIKPYRKVPASDLWRKMLSMLFETGHPWITFKDACN 566
Query: 413 KKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGS 472
+S QQ+ G + SSNLCTE+ TS TETAVCNL S+ L R++++
Sbjct: 567 VRSPQQHAGVVHSSNLCTEITLNTSDTETAVCNLGSVNLLRHLKD--------------- 611
Query: 473 RGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFI 532
G + D EKL + L+ +ID+NYY V+ AR SNLRHRP+G+GV G D
Sbjct: 612 -GENGKVLDHEKLKKTIATAMRMLDNVIDINYYAVKKARDSNLRHRPVGLGVMGFQDALY 670
Query: 533 LLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWG- 591
L +P+ S EA + E + Y+A S+E++ G Y ++ GS KGIL PD
Sbjct: 671 ELRVPYASNEAVEFADRSMEAVCYYAYWASTELSKERGRYSSFKGSLWDKGILPPDTLDL 730
Query: 592 ----------VNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTS 641
V+ S DW LR I+++G+RNS VA PTA+ S I+G + EP
Sbjct: 731 LAKERGGYVDVDRSSSLDWDALRQKIARDGMRNSNCVAIAPTATISNIIGVDASIEPCFG 790
Query: 642 NIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKT 701
N+ + LSGEF V+N +L+ DL +GLW ++ + + DGS++ I ++P+++KA+Y T
Sbjct: 791 NLSVKSNLSGEFTVINGYLVKDLKRLGLWDDVMVMDLKHFDGSLRPIDRVPQDVKALYAT 850
Query: 702 VWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSR 761
+E++ LV+ A R +ID +QSLNI+M + KL + AWLRGLKT YYLR+
Sbjct: 851 AFEVEPVWLVEAAARRQKWIDQAQSLNIYMAGASGKKLDETYKLAWLRGLKT-TYYLRTT 909
Query: 762 AAADAIKFTVDTSVL 776
+A K T T L
Sbjct: 910 SATQIEKSTGRTGQL 924
>gi|73542625|ref|YP_297145.1| ribonucleotide-diphosphate reductase subunit alpha [Ralstonia
eutropha JMP134]
gi|72120038|gb|AAZ62301.1| Ribonucleoside-diphosphate reductase [Ralstonia eutropha JMP134]
Length = 979
Score = 546 bits (1407), Expect = e-152, Method: Compositional matrix adjust.
Identities = 314/768 (40%), Positives = 438/768 (57%), Gaps = 49/768 (6%)
Query: 34 CDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKS 93
+P+L ++ +Y+GV +Q+ + A A + PDY+ + ARI++ + K +
Sbjct: 189 AEPIL--KETLKNLYEGVPMTQVYDSAILAARTLIEKDPDYSQVTARILLHTIRKEILGA 246
Query: 94 FSETIKDMYNHYNE------RSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFG 147
T +M Y E G+ A L+ + + + ARL + + RDF ++Y G
Sbjct: 247 -EVTQAEMTTRYAEYFPKFIARGIAAELLDEKLATF---DLARLGAALDAGRDFQFNYLG 302
Query: 148 FKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASPT 204
+TL Y L + +E PQ MRVA+G+ ++ D AI+ Y ++S F ++PT
Sbjct: 303 LQTLYDRYFLHIDETRIEMPQAFFMRVAMGLALNEADREARAIEFYQLLSSFDFMSSTPT 362
Query: 205 LFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRG 264
LFN+GT R+QLSSC+L + DD +EGIY+ LKE A++SK AGG+G N+RA GS+I+G
Sbjct: 363 LFNSGTRRSQLSSCYLTTVSDD-LEGIYEALKENALLSKFAGGLGNDWTNVRALGSHIKG 421
Query: 265 TNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHR 324
TNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R
Sbjct: 422 TNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRR 480
Query: 325 ARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EGK 379
D+ A W+PDLFM+RV NG W+LF P+ P L D G FE+ Y YE E K
Sbjct: 481 THDMNTANWIPDLFMKRVMENGEWTLFSPSTCPDLHDKVGKAFEQAYLGYEAKAASGELK 540
Query: 380 AKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPT 439
K V A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ T+ +
Sbjct: 541 LFKKVPAMQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTNDS 600
Query: 440 ETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKI 499
E AVCNL S+ L +H +K + + D KL + L+ +
Sbjct: 601 EIAVCNLGSVNLV-----------AHLTK----QADGSYVLDHAKLQKTIRTAMRMLDNV 645
Query: 500 IDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHAL 559
ID+NYY VE AR SNLRHRP+G+G+ G D +L P+ S A + E + Y+A
Sbjct: 646 IDINYYAVEKARNSNLRHRPVGMGIMGFQDCLHVLRTPYASDAAVKFADTSMEAVCYYAY 705
Query: 560 RTSSEIAAREGPYETYHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRDMIS 608
+ S+E+A G YETY GS +GIL D V+ S DW LR I
Sbjct: 706 QASTELAEERGRYETYAGSLWDRGILPQDSLKLLAEERGGYLEVDHSSSMDWDSLRGRIK 765
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMG 668
++G+RNS +A PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL E G
Sbjct: 766 QHGMRNSNCIAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNDYLVRDLKERG 825
Query: 669 LWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLN 728
LW ++ + Y DGS+ +I +IP++L+ IY T +E++ LV+ A R +ID +QSLN
Sbjct: 826 LWDEVMVADLKYFDGSLSRIDRIPQDLRDIYATAFEVEPTWLVEAASRRQKWIDQAQSLN 885
Query: 729 IHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
I+M + KL + AWLRGLKT YYLR+ AA K TV L
Sbjct: 886 IYMAGASGKKLDDTYKLAWLRGLKT-TYYLRTMAATHVEKSTVSRGSL 932
>gi|238026166|ref|YP_002910397.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
glumae BGR1]
gi|237875360|gb|ACR27693.1| Ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
glumae BGR1]
Length = 999
Score = 546 bits (1407), Expect = e-152, Method: Compositional matrix adjust.
Identities = 314/775 (40%), Positives = 439/775 (56%), Gaps = 57/775 (7%)
Query: 35 DPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSF 94
DP++ + +Y GV SQ+ + A A M P Y+ + ARI+ LH ++
Sbjct: 188 DPIVA--ETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARIL---LHTIRREIL 242
Query: 95 SETIK--DMYNHYNE------RSGLKAPLIADDV--YDIIMKNAARLDSEIIYDRDFDYD 144
E + +M Y E + G++A L+ D + +D++ RL + RD +
Sbjct: 243 GEEVSQGEMQARYAEYFPQFLKRGVEAELLDDKLLQFDLV-----RLGEALDAGRDLQFG 297
Query: 145 YFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHA 201
Y G +TL Y L V G +E PQ MRVA+G+ ++ID AI+ YH++S F +
Sbjct: 298 YLGLQTLYDRYFLHVDGTRIEMPQAFFMRVAMGLALNEIDREARAIEFYHVLSSFDFMSS 357
Query: 202 SPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSY 261
+PTLFN+GT R+QLSSC+L + DD ++GIY+ LKE A++SK AGG+G +RA GS+
Sbjct: 358 TPTLFNSGTRRSQLSSCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSH 416
Query: 262 IRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKE 321
I+GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G +
Sbjct: 417 IKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDD 475
Query: 322 EHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK----- 376
R D+ A W+PDLFM+RV W+LF P+ P L D +G EFE Y YE+
Sbjct: 476 RRRTHDMNTANWIPDLFMKRVMEGADWTLFSPSTCPDLHDKFGAEFEAAYLGYEEKVARG 535
Query: 377 EGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYT 436
E K K + AQ LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ T
Sbjct: 536 ELKLFKKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNT 595
Query: 437 SPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENL 496
S +E AVCNL S+ L ++ + + + D +KL + L
Sbjct: 596 SDSEIAVCNLGSVNLVAHLVK---------------QADGSYALDHDKLKRTVSVAMRML 640
Query: 497 NKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYY 556
+ +ID+NYY V AR SNL+HRP+G+G+ G D LL PF S A + E + Y
Sbjct: 641 DNVIDINYYAVAKARNSNLKHRPVGLGIMGFQDCLHLLRTPFSSDAAVEFADRSMEAVCY 700
Query: 557 HALRTSSEIAAREGPYETYHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRD 605
+A S+E++ G Y +Y GS +GIL D V+ S DW LR+
Sbjct: 701 YAYWASTELSEERGRYSSYRGSLWDRGILPQDTLKLLEEARGGYVEVDMSSSLDWTSLRE 760
Query: 606 MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLT 665
IS +G+RNS +A PTA+ S I+G + C EP N++ + LSGEF VVN++L+ DL
Sbjct: 761 RISLHGMRNSNCIAIAPTATISNIIGVSPCIEPTFQNLFVKSNLSGEFTVVNEYLVRDLK 820
Query: 666 EMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQ 725
E GLW ++ + Y DG + +I +IP +L+AIY T +E+ K LV+ A R +ID +Q
Sbjct: 821 ERGLWDEVMVADLKYFDGMLSRIDRIPSDLRAIYATAFEVDPKWLVEAASRRQKWIDQAQ 880
Query: 726 SLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
SLNI M + KL ++ AW+RGLKT YYLR+ AA K TV L P
Sbjct: 881 SLNIFMAGASGKKLDEIYKLAWVRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 934
>gi|402567672|ref|YP_006617017.1| ribonucleotide reductase subunit alpha [Burkholderia cepacia GG4]
gi|402248869|gb|AFQ49323.1| Ribonucleotide reductase of class Ia (aerobic),alpha subunit
[Burkholderia cepacia GG4]
Length = 997
Score = 546 bits (1407), Expect = e-152, Method: Compositional matrix adjust.
Identities = 314/773 (40%), Positives = 438/773 (56%), Gaps = 53/773 (6%)
Query: 35 DPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSF 94
DP++ + +Y GV SQ+ + A A M P Y+ + +RI+ LH ++
Sbjct: 190 DPIVA--ETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTSRIL---LHTIRREIL 244
Query: 95 SETI--KDMYNHYNE------RSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYF 146
E + +M Y E + G+ A L+ D ++ + RL + +RD + Y
Sbjct: 245 GEEVVQSEMSARYAEYFPQFLKRGVDAGLLDDK---LLQFDLTRLGEALDANRDLQFGYL 301
Query: 147 GFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASP 203
G +TL Y L V+G +E PQ MRVA+G+ ++ID AI+ Y+++S F ++P
Sbjct: 302 GLQTLYDRYFLHVEGSRIEMPQAFFMRVAMGLSLNEIDRETRAIEFYNVLSSFDFMSSTP 361
Query: 204 TLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT R+QLSSC+L + DD ++GIY+ LKE A++SK AGG+G +RA GS+I+
Sbjct: 362 TLFNSGTHRSQLSSCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIK 420
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEH 323
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G +
Sbjct: 421 GTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRR 479
Query: 324 RARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EG 378
R D+ A W+PDLFM+RV W+LF P+ P L D +G EFE YT YE E
Sbjct: 480 RTHDMNTANWIPDLFMKRVMEGADWTLFSPSTCPDLHDKFGAEFEAAYTAYEDKVARGEI 539
Query: 379 KAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSP 438
K K + AQ LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ TS
Sbjct: 540 KLFKKIPAQQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSD 599
Query: 439 TETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNK 498
TE AVCNL S+ L ++ + + + D +KL + L+
Sbjct: 600 TEIAVCNLGSVNLVAHLVK---------------QADGSYALDHDKLQRTIRVAMRMLDN 644
Query: 499 IIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHA 558
+ID+NYY V AR SNL+HRP+G+G+ G D LL P+ S A + E + Y+A
Sbjct: 645 VIDINYYAVPKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASEAAVEFADRSMEAVCYYA 704
Query: 559 LRTSSEIAAREGPYETYHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRDMI 607
S+E+A G Y +Y GS +GIL D V+ S+ DW LR I
Sbjct: 705 YYASTELAEERGRYSSYRGSLWDRGILPQDTLKLLTEARGGYVEVDTSEALDWTSLRSRI 764
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEM 667
+ +G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L+ DL E
Sbjct: 765 AAHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKER 824
Query: 668 GLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSL 727
GLW ++ + Y DG + +I +IP +L+AIY T +E+ LV+ A R +ID +QSL
Sbjct: 825 GLWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPTWLVEAASRRQKWIDQAQSL 884
Query: 728 NIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
NI+M + KL ++ AWLRGLKT YYLR+ AA K TV L P
Sbjct: 885 NIYMGGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 936
>gi|407714790|ref|YP_006835355.1| ribonucleoside-diphosphate reductase subunit alpha [Burkholderia
phenoliruptrix BR3459a]
gi|407236974|gb|AFT87173.1| ribonucleoside-diphosphate reductase alpha chain [Burkholderia
phenoliruptrix BR3459a]
Length = 1000
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 308/755 (40%), Positives = 431/755 (57%), Gaps = 47/755 (6%)
Query: 47 VYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKN------TKKSFSETIKD 100
+Y GV SQ+ + A A M P Y+ + ARI++ + + T+ E +
Sbjct: 195 LYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARILLHTIRREILEEEVTQAEMGERYAE 254
Query: 101 MYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQ 160
+ + +R G++A L+ D + +K RL + + +RD + Y G +TL Y L
Sbjct: 255 YFPQFIKR-GVQAELLDDKLLQFDLK---RLGAALDANRDLQFGYLGLQTLYDRYFLHHD 310
Query: 161 GKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSS 217
G +E PQ MRVA+G+ ++ID AI+ Y+++S F ++PTLFN+GT R+QLSS
Sbjct: 311 GVRIEMPQAFFMRVAMGLSLNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTRRSQLSS 370
Query: 218 CFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLR 277
C+L + DD ++GIY+ LKE A++SK AGG+G +RA GS+I+GTNG S G+VP L+
Sbjct: 371 CYLTTV-DDDLDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLK 429
Query: 278 VFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDL 337
V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R D+ A W+PDL
Sbjct: 430 VVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDL 488
Query: 338 FMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFE 392
FM+RV G W+LF P+ P L D +G EFE YT YE E K K + A LW +
Sbjct: 489 FMKRVMEGGDWTLFSPSTCPDLHDKFGAEFEAAYTAYEDKVARGEIKLFKKIPAAQLWRK 548
Query: 393 ILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALP 452
+L ETG P++ FKD CN +S QQ++G + SSNLCTE+ TS E AVCNL S+ L
Sbjct: 549 MLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDAEIAVCNLGSVNLV 608
Query: 453 RYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARR 512
+++E + D +KL + L+ +ID+NYY V AR
Sbjct: 609 AHLKE---------------QADGTLALDHDKLKRTVSVAMRMLDNVIDINYYAVAKARN 653
Query: 513 SNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPY 572
SNL+HRP+G+G+ G D LL P+ S EA + E + Y+A S+E+A G Y
Sbjct: 654 SNLKHRPVGMGIMGFQDCLHLLRTPYASEEAVKFADTSMEAVCYYAYYASTELAQERGRY 713
Query: 573 ETYHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRDMISKNGVRNSLLVAPM 621
+Y GS +GIL D V+ S+ DW LR I+ G+RNS +A
Sbjct: 714 SSYRGSLWDRGILPQDSVKLLAEARGGYVEVDSSESMDWTELRSRIATYGMRNSNCIAIA 773
Query: 622 PTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYD 681
PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL GLW ++ + Y
Sbjct: 774 PTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNDYLVRDLKARGLWDEVMVADLKYF 833
Query: 682 DGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTS 741
DG++ +I +IP +L+AIY T +E+ K LV+ A R +ID +QSLNI+M + KL
Sbjct: 834 DGTLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDE 893
Query: 742 LHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
++ AW+RGLKT YYLR+ AA K TV L
Sbjct: 894 IYKLAWVRGLKT-TYYLRTMAATHVEKSTVAHGAL 927
>gi|307731038|ref|YP_003908262.1| ribonucleoside-diphosphate reductase subunit alpha [Burkholderia
sp. CCGE1003]
gi|307585573|gb|ADN58971.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
sp. CCGE1003]
Length = 1000
Score = 546 bits (1406), Expect = e-152, Method: Compositional matrix adjust.
Identities = 308/755 (40%), Positives = 431/755 (57%), Gaps = 47/755 (6%)
Query: 47 VYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKN------TKKSFSETIKD 100
+Y GV SQ+ + A A M P Y+ + ARI++ + + T+ E +
Sbjct: 195 LYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARILLHTIRREILEEEVTQAEMGERYAE 254
Query: 101 MYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQ 160
+ + +R G++A L+ D + +K RL + + +RD + Y G +TL Y L
Sbjct: 255 YFPQFIKR-GVQAELLDDKLLQFDLK---RLGAALDANRDLQFGYLGLQTLYDRYFLHHD 310
Query: 161 GKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSS 217
G +E PQ MRVA+G+ ++ID AI+ Y+++S F ++PTLFN+GT R+QLSS
Sbjct: 311 GVRIEMPQAFFMRVAMGLSLNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTRRSQLSS 370
Query: 218 CFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLR 277
C+L + DD ++GIY+ LKE A++SK AGG+G +RA GS+I+GTNG S G+VP L+
Sbjct: 371 CYLTTV-DDDLDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLK 429
Query: 278 VFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDL 337
V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R D+ A W+PDL
Sbjct: 430 VVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDL 488
Query: 338 FMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFE 392
FM+RV G W+LF P+ P L D +G EFE YT YE E K K + A LW +
Sbjct: 489 FMKRVMEGGDWTLFSPSTCPDLHDKFGAEFEAAYTAYEDKVARGEIKLFKKIPAAQLWRK 548
Query: 393 ILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALP 452
+L ETG P++ FKD CN +S QQ++G + SSNLCTE+ TS E AVCNL S+ L
Sbjct: 549 MLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDAEIAVCNLGSVNLV 608
Query: 453 RYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARR 512
+++E + D +KL + L+ +ID+NYY V AR
Sbjct: 609 AHLKE---------------QADGTLALDHDKLKRTISVAMRMLDNVIDINYYAVAKARN 653
Query: 513 SNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPY 572
SNL+HRP+G+G+ G D LL P+ S EA + E + Y+A S+E+A G Y
Sbjct: 654 SNLKHRPVGMGIMGFQDCLHLLRTPYASEEAVKFADTSMEAVCYYAYYASTELAEERGRY 713
Query: 573 ETYHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRDMISKNGVRNSLLVAPM 621
+Y GS +GIL D V+ S+ DW LR I+ G+RNS +A
Sbjct: 714 SSYRGSLWDRGILPQDSVKLLAEARGGYVEVDSSESMDWSELRQRIATYGMRNSNCIAIA 773
Query: 622 PTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYD 681
PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL GLW ++ + Y
Sbjct: 774 PTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNDYLVRDLKARGLWDEVMVADLKYF 833
Query: 682 DGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTS 741
DG++ +I +IP +L+AIY T +E+ K LV+ A R +ID +QSLNI+M + KL
Sbjct: 834 DGTLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDE 893
Query: 742 LHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
++ AW+RGLKT YYLR+ AA K TV L
Sbjct: 894 IYKLAWVRGLKT-TYYLRTMAATHVEKSTVAHGAL 927
>gi|323527396|ref|YP_004229549.1| ribonucleoside-diphosphate reductase subunit alpha [Burkholderia
sp. CCGE1001]
gi|323384398|gb|ADX56489.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
sp. CCGE1001]
Length = 1006
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 308/755 (40%), Positives = 431/755 (57%), Gaps = 47/755 (6%)
Query: 47 VYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKN------TKKSFSETIKD 100
+Y GV SQ+ + A A M P Y+ + ARI++ + + T+ E +
Sbjct: 195 LYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARILLHTIRREILEEEVTQAEMGERYAE 254
Query: 101 MYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQ 160
+ + +R G++A L+ D + +K RL + + +RD + Y G +TL Y L
Sbjct: 255 YFPQFIKR-GVQAELLDDKLLQFDLK---RLGAALDANRDLQFGYLGLQTLYDRYFLHHD 310
Query: 161 GKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSS 217
G +E PQ MRVA+G+ ++ID AI+ Y+++S F ++PTLFN+GT R+QLSS
Sbjct: 311 GVRIEMPQAFFMRVAMGLSLNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTRRSQLSS 370
Query: 218 CFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLR 277
C+L + DD ++GIY+ LKE A++SK AGG+G +RA GS+I+GTNG S G+VP L+
Sbjct: 371 CYLTTV-DDDLDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLK 429
Query: 278 VFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDL 337
V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R D+ A W+PDL
Sbjct: 430 VVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDL 488
Query: 338 FMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFE 392
FM+RV G W+LF P+ P L D +G EFE YT YE E K K + A LW +
Sbjct: 489 FMKRVMEGGDWTLFSPSTCPDLHDKFGAEFEAAYTAYEDKVARGEIKLFKKIPAAQLWRK 548
Query: 393 ILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALP 452
+L ETG P++ FKD CN +S QQ++G + SSNLCTE+ TS E AVCNL S+ L
Sbjct: 549 MLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDAEIAVCNLGSVNLV 608
Query: 453 RYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARR 512
+++E + D +KL + L+ +ID+NYY V AR
Sbjct: 609 AHLKE---------------QADGTLALDHDKLKRTVSVAMRMLDNVIDINYYAVAKARN 653
Query: 513 SNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPY 572
SNL+HRP+G+G+ G D LL P+ S EA + E + Y+A S+E+A G Y
Sbjct: 654 SNLKHRPVGMGIMGFQDCLHLLRTPYASEEAVKFADTSMEAVCYYAYYASTELAQERGRY 713
Query: 573 ETYHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRDMISKNGVRNSLLVAPM 621
+Y GS +GIL D V+ S+ DW LR I+ G+RNS +A
Sbjct: 714 SSYRGSLWDRGILPQDSVKLLAEARGGYVEVDSSESMDWTELRSRIATYGMRNSNCIAIA 773
Query: 622 PTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYD 681
PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL GLW ++ + Y
Sbjct: 774 PTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNDYLVRDLKARGLWDEVMVADLKYF 833
Query: 682 DGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTS 741
DG++ +I +IP +L+AIY T +E+ K LV+ A R +ID +QSLNI+M + KL
Sbjct: 834 DGTLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDE 893
Query: 742 LHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
++ AW+RGLKT YYLR+ AA K TV L
Sbjct: 894 IYKLAWVRGLKT-TYYLRTMAATHVEKSTVAHGAL 927
>gi|194290771|ref|YP_002006678.1| ribonucleotide-diphosphate reductase subunit alpha [Cupriavidus
taiwanensis LMG 19424]
gi|193224606|emb|CAQ70617.1| Ribonucleoside-diphosphate reductase alpha subunit [Cupriavidus
taiwanensis LMG 19424]
Length = 979
Score = 545 bits (1405), Expect = e-152, Method: Compositional matrix adjust.
Identities = 314/768 (40%), Positives = 436/768 (56%), Gaps = 49/768 (6%)
Query: 34 CDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKS 93
+P+L ++ +Y+GV +Q+ + A A + PDY+ + ARI++ + K +
Sbjct: 189 AEPIL--KETLKNLYEGVPMTQVYDSAILAARTLIEKDPDYSQVTARILLHTIRKEILGT 246
Query: 94 FSETIKDMYNHYNE------RSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFG 147
T +M Y E G+ A L+ + + + ARL + + RDF ++Y G
Sbjct: 247 -EVTQAEMATRYAEYFPKFIARGIAAELLDEKLATF---DLARLGAALDAGRDFQFNYLG 302
Query: 148 FKTLERSYLLKVQGKVVERPQHMLMRVAVGI---HKDDIDSAIKTYHMMSQRWFTHASPT 204
+TL Y L + +E PQ MRVA+G+ KD AI+ Y ++S F ++PT
Sbjct: 303 LQTLYDRYFLHIDETRIEMPQAFFMRVAMGLALNEKDREARAIEFYQLLSSFDFMSSTPT 362
Query: 205 LFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRG 264
LFN+GT R+QLSSC+L + DD +EGIY+ LKE A++SK AGG+G N+RA GS+I+G
Sbjct: 363 LFNSGTQRSQLSSCYLTTVSDD-LEGIYEALKENALLSKFAGGLGNDWTNVRALGSHIKG 421
Query: 265 TNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHR 324
TNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R
Sbjct: 422 TNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRR 480
Query: 325 ARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EGK 379
D+ A W+PDLFM+RV N W+LF P+ P L D G FE+ Y YE E K
Sbjct: 481 THDMNTANWIPDLFMKRVMENAEWTLFSPSTCPDLHDKVGKAFEKAYLGYEAKAANGELK 540
Query: 380 AKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPT 439
K V A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ T+ +
Sbjct: 541 LFKKVPAMQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTNDS 600
Query: 440 ETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKI 499
E AVCNL S+ L +H +K + + D KL + L+ +
Sbjct: 601 EIAVCNLGSVNLV-----------AHLAK----QADGSYALDHAKLQKTIRTAMRMLDNV 645
Query: 500 IDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHAL 559
ID+NYY VE AR SNLRHRP+G+G+ G D +L P+ S A + E + Y+A
Sbjct: 646 IDINYYAVEKARNSNLRHRPVGMGIMGFQDCLHVLRTPYSSDAAVKFADTSMEAVCYYAY 705
Query: 560 RTSSEIAAREGPYETYHGSPVSKGILQPD-----------MWGVNPSDRWDWGGLRDMIS 608
+ S+E+A G YETY GS +GIL D V+ S DW LR I
Sbjct: 706 QASTELAEERGRYETYTGSLWDRGILPQDSLKLLAEERGGYLDVDMSSSMDWTSLRARIK 765
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMG 668
++G+RNS +A PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL E G
Sbjct: 766 QHGMRNSNCIAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNDYLVRDLKERG 825
Query: 669 LWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLN 728
LW ++ + Y DGS+ +I +IP++L+ IY T +E++ LV+ A R +ID +QSLN
Sbjct: 826 LWDEVMVADLKYFDGSLSRIDRIPQDLRDIYATAFEVEPTWLVEAASRRQKWIDQAQSLN 885
Query: 729 IHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
I+M + KL + AWLRGLKT YYLR+ AA K TV L
Sbjct: 886 IYMAGASGKKLDDTYKLAWLRGLKT-TYYLRTMAATHVEKSTVSRGSL 932
>gi|78065155|ref|YP_367924.1| ribonucleotide-diphosphate reductase subunit alpha [Burkholderia
sp. 383]
gi|77965900|gb|ABB07280.1| Ribonucleoside-diphosphate reductase [Burkholderia sp. 383]
Length = 998
Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust.
Identities = 313/773 (40%), Positives = 436/773 (56%), Gaps = 53/773 (6%)
Query: 35 DPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSF 94
DP++ + +Y GV SQ+ + A A M P Y+ + +RI+ LH ++
Sbjct: 190 DPIVA--ETVKNLYDGVPMSQVYDSAILAARTMIEKDPAYSQVTSRIL---LHTIRREIL 244
Query: 95 SETI--KDMYNHYNE------RSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYF 146
E + +M Y E + G+ A L+ D + +K RL + +RD + Y
Sbjct: 245 GEEVVQAEMSTRYAEYFPQFLKRGVDAGLLDDKLLQFDLK---RLGEALDANRDLQFGYL 301
Query: 147 GFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASP 203
G +TL Y L V+G +E PQ MRVA+G+ ++ID AI+ Y+++S F ++P
Sbjct: 302 GLQTLYDRYFLHVEGTRIEMPQAFFMRVAMGLSLNEIDRETRAIEFYNVLSSFDFMSSTP 361
Query: 204 TLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIR 263
TLFN+GT R+QLSSC+L + DD ++GIY+ LKE A++SK AGG+G +RA GS+I+
Sbjct: 362 TLFNSGTHRSQLSSCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIK 420
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEH 323
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G +
Sbjct: 421 GTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRR 479
Query: 324 RARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EG 378
R D+ A W+PDLFM+RV W+LF P+ P L D +G EFE YT YE E
Sbjct: 480 RTHDMNTANWIPDLFMKRVMEGADWTLFSPSTCPDLHDKFGAEFEAAYTAYEDKVARGEI 539
Query: 379 KAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSP 438
K K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ TS
Sbjct: 540 KLFKKIPAAQLWRKMLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSD 599
Query: 439 TETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNK 498
+E AVCNL S+ L ++ + + + D +KL + L+
Sbjct: 600 SEIAVCNLGSVNLVAHLVK---------------QADGSFALDHDKLKRTISVAMRMLDN 644
Query: 499 IIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHA 558
+ID+NYY V AR SNL+HRP+G+G+ G D LL P+ S A E + Y+A
Sbjct: 645 VIDINYYAVAKARNSNLKHRPVGMGIMGFQDCLHLLRTPYASEAAVAFADRSMEAVCYYA 704
Query: 559 LRTSSEIAAREGPYETYHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRDMI 607
S+E+A G Y +Y GS +GIL D V+ S+ DW LR I
Sbjct: 705 YHASTELAEERGRYSSYRGSLWDRGILPQDTLKLLAEARGGYVEVDTSESLDWTSLRSRI 764
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEM 667
+ +G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN++L+ DL E
Sbjct: 765 ATHGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNEYLVRDLKER 824
Query: 668 GLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSL 727
GLW ++ + Y DG + +I +IP +L+AIY T +E+ LV+ A R +ID +QSL
Sbjct: 825 GLWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPTWLVEAASRRQKWIDQAQSL 884
Query: 728 NIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
NI+M + KL ++ AWLRGLKT YYLR+ AA K TV L P
Sbjct: 885 NIYMGGASGKKLDEVYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 936
>gi|92119122|ref|YP_578851.1| ribonucleotide-diphosphate reductase subunit alpha [Nitrobacter
hamburgensis X14]
gi|91802016|gb|ABE64391.1| Ribonucleoside-diphosphate reductase [Nitrobacter hamburgensis X14]
Length = 966
Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust.
Identities = 316/810 (39%), Positives = 447/810 (55%), Gaps = 71/810 (8%)
Query: 7 DGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAA 66
DG + ++ A +++ GL + +L + +Y G++ +L A
Sbjct: 154 DGSMAPLDTRRLAAVVEEACAGLEGVSAEAILT--ETHRNLYDGISADELALAPILAART 211
Query: 67 MTTNHPDYASLAARIVVSNLHKNT-----KKSFSETIKDMYNHYNE------RSGLKAPL 115
+ PDYA +AR+++ L + + T +M Y E ++G++ L
Sbjct: 212 LVETDPDYAKASARLLLDKLRREALSLIAGRPEQATQAEMTGRYAEYFLGYVQTGIENEL 271
Query: 116 IADDV--YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMR 173
+ ++ +D+ RL + + +RD +DY GF+TL Y L V+G E PQ MR
Sbjct: 272 LDPEIGRFDL-----DRLAAALKPERDLQFDYLGFQTLYDRYFLHVRGTRFELPQAFFMR 326
Query: 174 VAVGIHKDDID---SAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEG 230
VA G+ +ID AI Y+++S F ++PTLFNAGT RAQLSSCFL + DD ++G
Sbjct: 327 VACGLALREIDREDKAIAFYNLLSSFDFMASTPTLFNAGTQRAQLSSCFLTTVADD-LDG 385
Query: 231 IYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGG 290
I+ +K+ A++SK AGG+G +R G++I+GTNG S G+VP L+V NDTA V+QGG
Sbjct: 386 IFKAIKDNALLSKYAGGLGNDWTRVRGLGAHIKGTNGESQGVVPFLKVANDTAIAVNQGG 445
Query: 291 GKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSL 350
KRKGA YLE WH DI EFLDLRKN G + R D+ A WVPDLFM+RV+ +G+W+L
Sbjct: 446 -KRKGAVCAYLETWHIDIEEFLDLRKNTGDDRRRTHDMNTANWVPDLFMQRVEEDGVWTL 504
Query: 351 FCPNEAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQIETGTPYM 405
F PNE P L D G F Y YE E + K V+A +LW +L ETG P++
Sbjct: 505 FSPNETPDLHDLTGKAFAERYAHYEGKAARGEMRVTKQVRAVDLWRRMLTMLFETGHPWI 564
Query: 406 LFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESH 465
FKD CN +S QQ+ G + SSNLCTE+ TS TE AVCNL S+ L ++ H
Sbjct: 565 TFKDPCNLRSPQQHCGVVHSSNLCTEITLNTSNTEVAVCNLGSVNLVNHL---------H 615
Query: 466 PSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQ 525
KL D LA L+ +++VN+Y + AR SNLRHRP+G+G+
Sbjct: 616 DGKL-----------DHAHLARTVKTAMRMLDNVLNVNFYTIPEARTSNLRHRPVGLGLM 664
Query: 526 GLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGIL 585
G D +L +P+ EA + E I Y A+ S ++AA G Y +Y GS SKGIL
Sbjct: 665 GFQDALNILRLPYACDEAVSFADESMEAISYWAISGSVDLAAERGRYPSYQGSLWSKGIL 724
Query: 586 QPDMWGV-----------NPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNE 634
D + + S R DW LR + G+RNS +A PTA+ S I G ++
Sbjct: 725 PLDSLALVDEARGAPIDLDRSSRLDWEALRQRVMTVGMRNSNCMAIAPTATISNICGVSQ 784
Query: 635 CFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEE 694
EP N+Y + +SG+F VVN HL+ DL GLW ++ + + Y DG + +I ++P++
Sbjct: 785 SIEPAYQNLYVKSNMSGDFTVVNAHLVRDLKARGLWDEVMISDLKYFDGGLSRIDRVPDD 844
Query: 695 LKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTG 754
LKA+Y T +EI L+D A R +ID +QSLN+++ P+ KL +L+ HAW RGLKT
Sbjct: 845 LKALYATAFEIDSAWLIDAAARRQKWIDQAQSLNLYIADPSGKKLDALYRHAWKRGLKT- 903
Query: 755 MYYLRSRAAADAIKFTVDTSVLKENPKVTD 784
YYLRSR+A T V K KVTD
Sbjct: 904 TYYLRSRSA---------THVEKSTLKVTD 924
>gi|330815477|ref|YP_004359182.1| Ribonucleotide-diphosphate reductase alpha subunit [Burkholderia
gladioli BSR3]
gi|327367870|gb|AEA59226.1| Ribonucleotide-diphosphate reductase alpha subunit [Burkholderia
gladioli BSR3]
Length = 993
Score = 545 bits (1403), Expect = e-152, Method: Compositional matrix adjust.
Identities = 316/775 (40%), Positives = 441/775 (56%), Gaps = 57/775 (7%)
Query: 35 DPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSF 94
DP++ + +Y GV SQ+ + A A M P Y+ + ARI+ LH ++
Sbjct: 188 DPIVA--ETVKNLYDGVPLSQVYDSAILAARTMIEKDPAYSQVTARIL---LHTIRREIL 242
Query: 95 SETIK--DMYNHYNE------RSGLKAPLIADDV--YDIIMKNAARLDSEIIYDRDFDYD 144
E + +M Y E + G++A L+ D + +D++ RL + RD +
Sbjct: 243 GEEVAQGEMQARYAEYFPQFLKRGVEAELLDDKLLQFDLV-----RLGEALDASRDLQFG 297
Query: 145 YFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHA 201
Y G +TL Y L V+G +E PQ MRVA+G+ ++ID AI+ Y+++S F +
Sbjct: 298 YLGLQTLYDRYFLHVEGTRIEMPQAFYMRVAMGLALNEIDREARAIEFYNVLSSFDFMSS 357
Query: 202 SPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSY 261
+PTLFN+GT R+QLSSC+L + DD ++GIY+ LKE A++SK AGG+G +RA GS+
Sbjct: 358 TPTLFNSGTRRSQLSSCYLTTVADD-LDGIYEALKENALLSKFAGGLGNDWTRVRALGSH 416
Query: 262 IRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKE 321
I+GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G +
Sbjct: 417 IKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDD 475
Query: 322 EHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK----- 376
R D+ A W+PDLFM+RV G W+LF P+ P L D +G EFE Y YE+
Sbjct: 476 RRRTHDMNTANWIPDLFMKRVMEGGDWTLFSPSTCPDLHDKFGAEFEAAYLGYEEKVARG 535
Query: 377 EGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYT 436
E K K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ T
Sbjct: 536 ELKLFKKIPAAQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNT 595
Query: 437 SPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENL 496
S +E AVCNL S+ L +H +K + + D +KL + L
Sbjct: 596 SDSEIAVCNLGSVNLV-----------AHLAK----QADGSYALDHDKLKRTVSVAMRML 640
Query: 497 NKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYY 556
+ +ID+NYY V AR SNL+HRP+G+G+ G D LL PF S A + E + Y
Sbjct: 641 DNVIDINYYAVAKARNSNLKHRPVGLGIMGFQDCLHLLRTPFSSDTAVEFADRSMEAVCY 700
Query: 557 HALRTSSEIAAREGPYETYHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRD 605
+A S+E+A G Y +Y GS +GIL D V+ S+ DW LR
Sbjct: 701 YAYWASTELAEERGRYSSYTGSLWDRGILPQDTLKLLEEARGGYVEVDMSESLDWTSLRG 760
Query: 606 MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLT 665
IS +G+RNS +A PTA+ S I+G + C EP N++ + LSGEF VVN++L+ DL
Sbjct: 761 RISVHGMRNSNCIAIAPTATISNIIGVSPCIEPTFQNLFVKSNLSGEFTVVNEYLVRDLK 820
Query: 666 EMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQ 725
E GLW ++ + Y DG + +I +IP +L+AIY T +E+ K LV+ A R +ID +Q
Sbjct: 821 ERGLWDEVMVADLKYFDGMLSRIDRIPADLRAIYATAFEVDPKWLVEAASRRQKWIDQAQ 880
Query: 726 SLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
SLNI M + KL ++ AW+RGLKT YYLR+ AA K TV L P
Sbjct: 881 SLNIFMAGASGKKLDEIYKLAWVRGLKT-TYYLRTMAATHVEKSTVAHGALNAVP 934
>gi|339327268|ref|YP_004686961.1| ribonucleoside-diphosphate reductase subunit alpha [Cupriavidus
necator N-1]
gi|338167425|gb|AEI78480.1| ribonucleoside-diphosphate reductase subunit alpha [Cupriavidus
necator N-1]
Length = 977
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 313/770 (40%), Positives = 437/770 (56%), Gaps = 53/770 (6%)
Query: 34 CDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKN---- 89
+P+L ++ +Y GV +Q+ + A A + PDY+ + ARI++ + K
Sbjct: 187 AEPIL--KETLKNLYDGVPMTQVYDSAILAARTLIEKDPDYSQVTARILLHTIRKEILGT 244
Query: 90 --TKKSFSETIKDMYNHYNERSGLKAPLIADDV--YDIIMKNAARLDSEIIYDRDFDYDY 145
T+ S + + + R G++A L+ + + YD+ ARL + + RDF ++Y
Sbjct: 245 EVTQAEMSSRYAEYFPKFIAR-GIQAELLDEQLATYDL-----ARLGAALDAGRDFQFNY 298
Query: 146 FGFKTLERSYLLKVQGKVVERPQHMLMRVAVGI---HKDDIDSAIKTYHMMSQRWFTHAS 202
G +TL Y L + +E PQ MRVA+G+ KD AI+ Y ++S F ++
Sbjct: 299 LGLQTLYDRYFLHIDETRIEMPQAFFMRVAMGLALNEKDREARAIEFYQLLSSFDFMSST 358
Query: 203 PTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYI 262
PTLFN+GT R+QLSSC+L + DD +EGIY+ LKE A++SK AGG+G N+RA GS+I
Sbjct: 359 PTLFNSGTRRSQLSSCYLTTVSDD-LEGIYEALKENALLSKFAGGLGNDWTNVRALGSHI 417
Query: 263 RGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEE 322
+GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G +
Sbjct: 418 KGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDR 476
Query: 323 HRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----E 377
R D+ A W+PDLFM+RV G W+LF P P L D G EFE+ Y YE E
Sbjct: 477 RRTHDMNTANWIPDLFMKRVMEAGEWTLFSPATCPDLHDKVGKEFEKAYLGYEAKAASGE 536
Query: 378 GKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTS 437
K K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ T+
Sbjct: 537 LKLFKKLPALQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTN 596
Query: 438 PTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLN 497
+E AVCNL S+ L +H +K + D KL + L+
Sbjct: 597 ESEIAVCNLGSVNLV-----------AHMTK----QADGTYALDHAKLQKTVRTAMRMLD 641
Query: 498 KIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYH 557
+ID+NYY V+ AR SNLRHRP+G+G+ G D +L P+ S A + E + Y+
Sbjct: 642 NVIDINYYAVDKARNSNLRHRPVGMGIMGFQDCLHVLRTPYSSDAAVKFADTSMEAVCYY 701
Query: 558 ALRTSSEIAAREGPYETYHGSPVSKGILQPD-----------MWGVNPSDRWDWGGLRDM 606
A + S+E+A G Y TY GS +GIL D V+ S DW LR
Sbjct: 702 AYKASTELAEERGRYSTYEGSLWDRGILPQDSLKLLAEERGGYLDVDLSSTMDWDALRAR 761
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
I ++G+RNS +A PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL E
Sbjct: 762 IKQHGMRNSNCIAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNDYLVRDLKE 821
Query: 667 MGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQS 726
GLW ++ + Y DGS+ +I +IP++L+ IY T +E++ LV+ A R +ID +QS
Sbjct: 822 RGLWDEVMVADLKYFDGSLSRIDRIPQDLRDIYATAFEVEPTWLVEAASRRQKWIDQAQS 881
Query: 727 LNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
LNI+M + KL + AWLRGLKT YYLR+ AA K TV L
Sbjct: 882 LNIYMAGASGKKLDDTYKLAWLRGLKT-TYYLRTMAATHVEKSTVSRGSL 930
>gi|209521090|ref|ZP_03269820.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
sp. H160]
gi|209498473|gb|EDZ98598.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
sp. H160]
Length = 1003
Score = 544 bits (1402), Expect = e-152, Method: Compositional matrix adjust.
Identities = 308/755 (40%), Positives = 429/755 (56%), Gaps = 47/755 (6%)
Query: 47 VYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKN------TKKSFSETIKD 100
+Y GV SQ+ + A A M P Y+ + ARI++ + + T+ E +
Sbjct: 196 LYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARILLHTIRREILEEEVTQAEMGERYAE 255
Query: 101 MYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQ 160
+ + +R G+ A L+ D + +K RL + + +RD + Y G +TL Y L
Sbjct: 256 YFPQFIKR-GIGAGLLDDKLQQFDLK---RLGAALDANRDLQFGYLGLQTLYDRYFLHHD 311
Query: 161 GKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSS 217
G +E PQ MRVA+G+ ++ID AI+ Y+++S F ++PTLFN+GT R+QLSS
Sbjct: 312 GVRIEMPQAFFMRVAMGLSLNEIDREARAIEFYNILSSFDFMSSTPTLFNSGTHRSQLSS 371
Query: 218 CFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLR 277
C+L + DD ++GIY+ LKE A++SK AGG+G +RA GS+I+GTNG S G+VP L+
Sbjct: 372 CYLTTV-DDDLDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLK 430
Query: 278 VFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDL 337
V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R D+ A W+PDL
Sbjct: 431 VVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDL 489
Query: 338 FMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFE 392
FM+RV G W+LF P+ P L D +G EFE YT YE E K K + A LW +
Sbjct: 490 FMKRVMEGGDWTLFSPSTCPDLHDKFGAEFEAAYTAYEDKVARGEIKLFKKLPAAQLWRK 549
Query: 393 ILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALP 452
+L ETG P++ FKD CN +S QQ++G + SSNLCTE+ TS E AVCNL S+ L
Sbjct: 550 MLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDAEIAVCNLGSVNLV 609
Query: 453 RYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARR 512
+++E + D +KL + L+ +ID+NYY V AR
Sbjct: 610 AHLKE---------------QADGTLALDHDKLKRTVSVAMRMLDNVIDINYYAVAKARN 654
Query: 513 SNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPY 572
SNL+HRP+G+G+ G D +L P+ S EA + E + Y+A S+E+A G Y
Sbjct: 655 SNLKHRPVGLGIMGFQDCLHMLRTPYASQEAVEFADRSMEAVCYYAYYASTELAEERGRY 714
Query: 573 ETYHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRDMISKNGVRNSLLVAPM 621
+Y GS +GIL D V+ S+ DW LR I+ G+RNS VA
Sbjct: 715 SSYRGSLWDRGILPQDSVALLAEARGGYVEVDSSESMDWPALRSRIATYGMRNSNCVAIA 774
Query: 622 PTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYD 681
PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL GLW ++ + Y
Sbjct: 775 PTATISNIIGVSACIEPTYQNLYVKSNLSGEFTVVNDYLVRDLKARGLWDEVMVADLKYF 834
Query: 682 DGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTS 741
DG++ +I +IP +L+AIY T +E+ LV+ A R +ID +QSLNI+M + KL
Sbjct: 835 DGTLSRIDRIPADLRAIYATAFEVDPVWLVESASRRQKWIDQAQSLNIYMAGASGKKLDE 894
Query: 742 LHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
++ AWLRGLKT YYLR+ AA K TV L
Sbjct: 895 IYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGAL 928
>gi|375107585|ref|ZP_09753846.1| ribonucleoside-diphosphate reductase, alpha subunit
[Burkholderiales bacterium JOSHI_001]
gi|374668316|gb|EHR73101.1| ribonucleoside-diphosphate reductase, alpha subunit
[Burkholderiales bacterium JOSHI_001]
Length = 972
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 316/810 (39%), Positives = 456/810 (56%), Gaps = 62/810 (7%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIE-HCDPVLVSQKVCTGVYKGVTTSQLDEL 59
++V R G++ + F + A ++ GL E +P+L + +Y GV ++ +
Sbjct: 147 LHVTDR-GQRVPLDFAALQALVESSCAGLGAEVKAEPILAETR--RNLYDGVPIDEVYKA 203
Query: 60 AAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSE--TIKDMYNHYNE------RSGL 111
A A + P Y AR++ LH K+ E T M Y E + G+
Sbjct: 204 AILAARTLIEKDPAYTRATARLL---LHTVRKEIVGEELTQAQMATRYAEYFPQFIKKGI 260
Query: 112 KAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHML 171
+A + + + A L + I +RD +DY G +TL Y + V + +E PQ
Sbjct: 261 EAERLDAKMAQF---DLAALGAAIQPERDMQFDYLGLQTLYDRYFIHVDERRIEMPQAFF 317
Query: 172 MRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSI 228
MRVA+G+ ++ID AI+ Y+++S F ++PTLFN+GT R+QLSSC+L + DD +
Sbjct: 318 MRVAMGLALNEIDREARAIEFYNVLSTFDFMSSTPTLFNSGTQRSQLSSCYLTTVADD-L 376
Query: 229 EGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQ 288
+GIY+ LKE A++SK AGG+G +RA GSYI+GTNG S G+VP L+V NDTA V+Q
Sbjct: 377 DGIYEALKENALLSKFAGGLGNDWTRVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQ 436
Query: 289 GGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLW 348
GG KRKGA YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV G W
Sbjct: 437 GG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGGDW 495
Query: 349 SLFCPNEAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQIETGTP 403
+LF P+ P L D +G +FE YT YE E K K V A++LW ++L ETG P
Sbjct: 496 TLFSPSTCPDLHDKFGADFEAAYTAYEAKADRGELKLFKRVPAKDLWRKMLTMLFETGHP 555
Query: 404 YMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPME 463
++ FKD CN +S QQ+ G + SSNLCTE+ TS TE AVCNL S+ L +++++ +
Sbjct: 556 WVTFKDACNVRSPQQHAGVVHSSNLCTEITLNTSDTEIAVCNLGSVNLAQHLKDGSI--- 612
Query: 464 SHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIG 523
D +KL + L+ +ID+NYY V+ AR SNLRHRP+G+G
Sbjct: 613 -----------------DHDKLKKTVATAMRMLDNVIDINYYAVKKARDSNLRHRPVGLG 655
Query: 524 VQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKG 583
+ G D L +P+ S EA + E + YHA SS++AA G Y +Y GS +G
Sbjct: 656 IMGFQDALYQLRLPYASAEAVEFADRSMEAVCYHAYAASSDLAAERGRYSSYRGSLWDRG 715
Query: 584 ILQPDMWG-------------VNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQIL 630
IL D V+ S DW LR I+++G+RNS VA PTA+ S I+
Sbjct: 716 ILPHDTLDLLAQARGGAEFVQVDRSATLDWDALRARIAQHGMRNSNCVAIAPTATISNII 775
Query: 631 GNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQ 690
G + EP N+ + LSGEF +VN++L+ DL ++GLW ++ + + DGS+++I +
Sbjct: 776 GVDASIEPCFGNLSVKSNLSGEFTIVNEYLVRDLKKLGLWDDVMVMDLKHFDGSLRRIDR 835
Query: 691 IPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRG 750
+P E+KA+Y T +E+ + LV+ A R +ID +QSLNI++ + KL ++ AWLRG
Sbjct: 836 VPPEVKALYATAFEVDAQWLVEAAARRQKWIDQAQSLNIYLAGASGKKLDEIYKLAWLRG 895
Query: 751 LKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
LKT YYLR+ A A K TV + P
Sbjct: 896 LKT-TYYLRTMGATHAEKSTVSAGSMNAVP 924
>gi|91787005|ref|YP_547957.1| ribonucleotide-diphosphate reductase subunit alpha [Polaromonas sp.
JS666]
gi|91696230|gb|ABE43059.1| Ribonucleoside-diphosphate reductase [Polaromonas sp. JS666]
Length = 969
Score = 544 bits (1401), Expect = e-152, Method: Compositional matrix adjust.
Identities = 303/764 (39%), Positives = 442/764 (57%), Gaps = 58/764 (7%)
Query: 35 DPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSF 94
DP++ + +Y GV ++ + + A + PDY AR++ +H ++
Sbjct: 182 DPIVA--ETMRNLYDGVPIDEVYKASILAARTLIEKDPDYTYATARLL---MHTIRREVL 236
Query: 95 SETI--KDMYNHYNE------RSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYF 146
E + ++M++ Y E G++ L+ + + + ARL + + +RD +DY
Sbjct: 237 GEEVSQEEMHSRYAEYFPKFIAKGVQNELLDEKLQQF---DLARLGAALKPERDLKFDYL 293
Query: 147 GFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASP 203
G +TL Y L V+ + +E PQ MRVA+G+ +ID AI+ Y ++S F ++P
Sbjct: 294 GLQTLFDRYFLHVRKQRIELPQAFFMRVAMGLSLGEIDREARAIEFYEILSSFDFMSSTP 353
Query: 204 TLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIR 263
TLFNAGT R+QLSSC+L + DD + GIYD +KE A++SK AGG+G +RA G++I+
Sbjct: 354 TLFNAGTLRSQLSSCYLTTVADD-LGGIYDAIKENALLSKFAGGLGNDWTPVRALGAHIK 412
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEH 323
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G +
Sbjct: 413 GTNGESQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRR 471
Query: 324 RARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EG 378
R D+ A W+PDLFM RV G W+LF P++ P L D +G EFE++YT YE E
Sbjct: 472 RTHDMNTANWIPDLFMRRVMEKGTWTLFSPSDTPDLHDKFGKEFEKIYTAYEARAERGEI 531
Query: 379 KAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSP 438
K + +QA ++W ++L ETG P++ FKD CN +S QQ+ G + SSNLCTE+ TS
Sbjct: 532 KPARKLQATDMWRKMLSMLFETGHPWITFKDACNVRSPQQHAGVVHSSNLCTEITLNTSD 591
Query: 439 TETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNK 498
TETAVCNL S+ L +++++ + D +KL + L+
Sbjct: 592 TETAVCNLGSVNLVQHLKDGAI--------------------DHDKLKKTITTAMRMLDN 631
Query: 499 IIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHA 558
+ID+NYY V+ AR SN+RHRP+G+G+ G D L +P+ S EA + E + YHA
Sbjct: 632 VIDINYYAVKKARDSNMRHRPVGLGIMGFQDCLYELRVPYASQEAVEFADKSMEAVCYHA 691
Query: 559 LRTSSEIAAREGPYETYHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRDMI 607
S+E+A G Y +Y GS KGIL D V+ S DW LR I
Sbjct: 692 YWASTELAKERGKYASYKGSLWDKGILPLDTLDMLAEERGGYVEVDRSATLDWDALRQKI 751
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEM 667
+++G+RNS VA PTA+ S I+G + C EP N+ + LSGEF V+N +L+ DL +
Sbjct: 752 AQDGMRNSNCVAIAPTATISNIIGVDACIEPCFGNLSVKSNLSGEFTVINHYLVRDLKRL 811
Query: 668 GLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSL 727
GLW ++ + + DGS++ + ++P+E+KA+Y T +E++ +V+ A R +ID +QSL
Sbjct: 812 GLWDDVMVVDLKHFDGSLRPVDRVPQEIKALYATAFEVETSWIVEAAARRQKWIDQAQSL 871
Query: 728 NIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTV 771
NI+M + KL + AWLRGLKT YYLR+ A A K TV
Sbjct: 872 NIYMAGASGKKLDDTYKLAWLRGLKT-TYYLRTMGATHAEKSTV 914
>gi|374620691|ref|ZP_09693225.1| ribonucleoside-diphosphate reductase, alpha subunit [gamma
proteobacterium HIMB55]
gi|374303918|gb|EHQ58102.1| ribonucleoside-diphosphate reductase, alpha subunit [gamma
proteobacterium HIMB55]
Length = 962
Score = 543 bits (1400), Expect = e-151, Method: Compositional matrix adjust.
Identities = 324/842 (38%), Positives = 465/842 (55%), Gaps = 72/842 (8%)
Query: 3 VVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAE 62
VV DG + + ++I + + LS + + +Y GVT +L
Sbjct: 154 VVGADGTSKPLDIERIRTIVAEACMDLS--DVSEAAIIDEALKNLYNGVTEQELSTSLVI 211
Query: 63 TAAAMTTNHPDYASLAARIVVSNLHKNTKKSF-----SETIKDMYNHYNE------RSGL 111
TA M P+Y+S+AAR+++ NL + SF S T DM +Y + G+
Sbjct: 212 TARTMIEQEPNYSSVAARLLLDNL-RAEGLSFLNVAESATQGDMATYYPQALKSFISRGI 270
Query: 112 KAPLIADDV--YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQH 169
+ L+A ++ YD+ M L ++ +RD + Y G +TL Y + E PQ
Sbjct: 271 ELELLAPNLAEYDLDM-----LGDALLPERDLQFSYLGLQTLYDRYFIHSDETRFELPQL 325
Query: 170 MLMRVAVGI--HKDDIDS-AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDD 226
MRVA+G+ +DD ++ AI+ Y ++S + ++PTLFN+GT R QLSSC+L + DD
Sbjct: 326 FFMRVAMGLATREDDKNARAIEFYQLLSSFDYMSSTPTLFNSGTLRPQLSSCYLTTVPDD 385
Query: 227 SIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYV 286
+ GIY +++ A++SK AGG+G +RA G+YI+GTNG S G+VP L+V NDTA V
Sbjct: 386 -LHGIYGAIQDNAMLSKFAGGLGNDWTPVRALGAYIKGTNGKSQGVVPFLKVVNDTAVAV 444
Query: 287 DQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNG 346
+QGG KRKGA YLE WH DI EFL+LRKN G + R D+ A WVPDLFM+RV +G
Sbjct: 445 NQGG-KRKGAVCAYLETWHMDIEEFLELRKNTGDDRRRTHDMNTANWVPDLFMKRVFEDG 503
Query: 347 LWSLFCPNEAPGLADCWGTEFERLYTKYEKEG-----KAKKVVQAQNLWFEILKSQIETG 401
W+LF PN+ P L D +GT FE YT+YE++ K K ++AQ LW ++L ETG
Sbjct: 504 DWTLFSPNDVPDLHDLYGTAFEERYTQYEEQARTGELKLHKTLKAQALWRKMLGMIFETG 563
Query: 402 TPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVP 461
P++ FKD CN +S QQ+ G + SSNLCTE+ TS E AVCNL S+ LP+++
Sbjct: 564 HPWITFKDPCNIRSPQQHCGVVHSSNLCTEITLNTSKDEIAVCNLGSVNLPQHI------ 617
Query: 462 MESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIG 521
+N + +KL + L+ +ID+NYY VET+ SN++HRPIG
Sbjct: 618 --------------ENGELNIDKLRKTVTTAIRMLDNVIDINYYSVETSENSNMKHRPIG 663
Query: 522 IGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVS 581
+G+ G D + + S +A + E I Y A+ S+++AA G Y +Y GS S
Sbjct: 664 LGLMGFQDALYKTDISYASEQAVEFADKSMEAISYFAISASTDLAAERGAYSSYEGSLWS 723
Query: 582 KGILQ------------PDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQI 629
+GI D VN DW LR +++ G+RNS ++A PTA+ + I
Sbjct: 724 QGIFPIDSLNMLVEQRGADYISVNQDSSMDWDALRGKVAQQGMRNSNVMAIAPTATIANI 783
Query: 630 LGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIP 689
G ++ EP N+Y + LSGEF VVN +L+ DL E GLW ++ N + Y DGSVQ +
Sbjct: 784 TGVSQSIEPTYQNLYVKSNLSGEFTVVNPYLVRDLKERGLWDKVMVNDLKYFDGSVQAVD 843
Query: 690 QIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLR 749
+IP +LKA Y T +E++ + LVD A R +ID +QSLN++++ + KL + AW
Sbjct: 844 RIPADLKAKYATAFEVEPRWLVDAASRRQKWIDQAQSLNLYINNASGKKLDVTYRMAWYS 903
Query: 750 GLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAKMAQ-----MVCSLTNREECM 804
GLKT YYLRS AA K TV+T L N +A Q CSL + +C
Sbjct: 904 GLKT-TYYLRSLAATGTEKSTVNTGQL--NAVSQQAAEAAPVQPAPVPKACSLDD-PDCE 959
Query: 805 AC 806
AC
Sbjct: 960 AC 961
>gi|444731994|gb|ELW72321.1| Ribonucleoside-diphosphate reductase large subunit [Tupaia
chinensis]
Length = 447
Score = 543 bits (1398), Expect = e-151, Method: Compositional matrix adjust.
Identities = 288/537 (53%), Positives = 354/537 (65%), Gaps = 91/537 (16%)
Query: 35 DPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSF 94
D ++++ KV G+Y GVT +LD LAAETAA +TT HPDYA LAARI VSNLHK TKK F
Sbjct: 2 DFLVLTMKVIQGLYSGVTMVELDTLAAETAATLTTKHPDYAILAARIAVSNLHKETKKMF 61
Query: 95 SETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERS 154
S+ ++D+YN+ N +G + ++A DI++ N L+S IIYDRDF Y+YFGFK LE+S
Sbjct: 62 SDVMEDLYNYINPHNGKHSSMVAKSTLDIVLANKDCLNSAIIYDRDFSYNYFGFKALEQS 121
Query: 155 YLLKVQGKVVERPQHMLMRVAVGIHKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQ 214
YLLK+ GKV +RPQHMLMRV+VGIHK+DID+AI+TY+++S++WFTHASPTLFNAGT R +
Sbjct: 122 YLLKISGKVADRPQHMLMRVSVGIHKEDIDAAIETYNLLSEKWFTHASPTLFNAGTNRPE 181
Query: 215 LSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVP 274
LS+ FL+ MKDDSIEGIYDTLK+CA+ISKSAGGIGV+V IRATGSY+ GTNG SNG+VP
Sbjct: 182 LSTYFLLNMKDDSIEGIYDTLKQCALISKSAGGIGVAVSCIRATGSYLAGTNGNSNGLVP 241
Query: 275 MLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWV 334
MLRV+++TARYVDQ
Sbjct: 242 MLRVYSNTARYVDQ---------------------------------------------- 255
Query: 335 PDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKVVQAQNLWFEIL 394
DLFM+ V++N WSL CPNE PGL + WG EFE+LY KYEK+G KVV+AQ L
Sbjct: 256 -DLFMKWVETNQDWSLMCPNECPGLDEVWGEEFEKLYEKYEKQGHIHKVVKAQQL----- 309
Query: 395 KSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRY 454
NQQNLG IK SNLCTE+++YTS E AVCNLAS+AL Y
Sbjct: 310 --------------------CNQQNLGAIKCSNLCTEIVEYTSKEEVAVCNLASLALNMY 349
Query: 455 VREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSN 514
V + +DF+KLAEVT ++ NLNKII+ NYYP+ A SN
Sbjct: 350 V-------------------TSEHTYDFKKLAEVTEVIVRNLNKIINRNYYPIPEAYVSN 390
Query: 515 LRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGP 571
RH PIGIGVQ LAD FIL+ PF+S E Q LNK IF+TIYY AL S ++A GP
Sbjct: 391 KRHHPIGIGVQVLADAFILMRYPFESPEVQLLNKQIFQTIYYGALEASCDLAKEYGP 447
>gi|427400630|ref|ZP_18891868.1| ribonucleoside-diphosphate reductase, alpha subunit [Massilia
timonae CCUG 45783]
gi|425720143|gb|EKU83066.1| ribonucleoside-diphosphate reductase, alpha subunit [Massilia
timonae CCUG 45783]
Length = 976
Score = 543 bits (1398), Expect = e-151, Method: Compositional matrix adjust.
Identities = 319/803 (39%), Positives = 451/803 (56%), Gaps = 63/803 (7%)
Query: 8 GKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAM 67
G++ + + + A + GL +H D + + +Y GV +L + A A A+
Sbjct: 156 GERRLLDINDVHALVNAACSGLE-KHVDADAIVAETLKNLYDGVPVEELYKSAILAARAL 214
Query: 68 TTNHPDYASLAARIVVSNLHKNTKKSFSETIKDM---------YNHYNERSGLKAPLIAD 118
P Y+ + ARI+ LH K+ F + + Y + G++A L+ +
Sbjct: 215 MEKDPAYSQVTARIL---LHTIRKEVFGHEVPQAGAAAEYLTYFPQYVAK-GIQAELLDE 270
Query: 119 DV--YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAV 176
++ YD+ RL I+ DRD + Y G +TL Y L V+ +E PQ MRVA+
Sbjct: 271 ELGKYDL-----ERLAKAIVADRDLQFGYIGLQTLYDRYFLHVRDVRIEMPQAFYMRVAM 325
Query: 177 GI--HKDDIDS-AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYD 233
G+ +DD ++ AI+ Y+++S F ++PTLFN+GT R+QLSSC+L + DD +EGIYD
Sbjct: 326 GLALREDDREARAIEFYNLLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTVGDD-LEGIYD 384
Query: 234 TLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKR 293
+KE A++SK AGG+G +RA GS I+GTNG S G+VP L+V NDTA V+QGG KR
Sbjct: 385 AIKENALLSKFAGGLGNDWTPVRALGSRIKGTNGRSQGVVPFLKVVNDTAVAVNQGG-KR 443
Query: 294 KGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCP 353
KGA YLE WH DI EFLDLRKN G + R D+ A W+PDLFM+RV G W+LF P
Sbjct: 444 KGAVCAYLETWHLDIEEFLDLRKNTGDDRRRTHDMNTANWIPDLFMKRVMEKGSWTLFSP 503
Query: 354 NEAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQIETGTPYMLFK 408
+E P L D G FE+ Y YE E K ++A +LW ++L ETG P++ FK
Sbjct: 504 SETPDLHDLTGKAFEKAYLAYETKAANGEMAVFKKIEAMDLWRKMLSMLFETGHPWITFK 563
Query: 409 DTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSK 468
D CN +S QQ++G + SSNLCTE+ TS E AVCNL S+ LP++++ G+
Sbjct: 564 DPCNIRSPQQHVGVVHSSNLCTEITLNTSADEIAVCNLGSVNLPQHMKGDGL-------- 615
Query: 469 LVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLA 528
D KL + L+ +ID+NYY VE AR SNLRHRP+G+GV G
Sbjct: 616 ------------DHVKLQKTIRTAMRMLDNVIDINYYAVEKARNSNLRHRPVGMGVMGHQ 663
Query: 529 DTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPD 588
D ++ +PF S +A + E + Y+A S+E+A G YETY GS +GIL D
Sbjct: 664 DCLHMMRIPFASEQAVKFADVSMEAVCYYAYLASTELAEERGRYETYTGSLWDRGILPQD 723
Query: 589 MWGV-----------NPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFE 637
+ + S+ DW +R+ I + G+RNS VA PTA+ S I+G + C E
Sbjct: 724 SIKLLAEERGGYLEQDTSESMDWTPVRERIKQFGMRNSNCVAIAPTATISNIIGVSACIE 783
Query: 638 PYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKA 697
P N+Y + LSGEF +N +L+ DL LW ++ + Y DGS+ KI ++P++L+
Sbjct: 784 PTFQNLYVKSNLSGEFTEINSYLVRDLKARDLWDEVMIADLKYFDGSLSKIDRVPQDLRD 843
Query: 698 IYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYY 757
IY T +E++ K LV+ A R +ID +QSLNI+M + KL + AWLRGLKT YY
Sbjct: 844 IYATAFEVEPKWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDETYKLAWLRGLKT-TYY 902
Query: 758 LRSRAAADAIKFTVDTSVLKENP 780
LR+ AA K T T L P
Sbjct: 903 LRTIAATHLEKSTTRTGALNAVP 925
>gi|398803255|ref|ZP_10562361.1| ribonucleoside-diphosphate reductase, alpha subunit [Polaromonas
sp. CF318]
gi|398097134|gb|EJL87446.1| ribonucleoside-diphosphate reductase, alpha subunit [Polaromonas
sp. CF318]
Length = 969
Score = 543 bits (1398), Expect = e-151, Method: Compositional matrix adjust.
Identities = 305/764 (39%), Positives = 441/764 (57%), Gaps = 58/764 (7%)
Query: 35 DPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSF 94
DP++ + +Y GV ++ + + A + PDY AR++ +H ++
Sbjct: 182 DPIVA--ETMRNLYDGVPIDEVYKASILAARTLIEKDPDYTYATARLL---MHTIRREVL 236
Query: 95 SETI--KDMYNHYNE------RSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYF 146
E + DM Y E G++ L+ + + + ARL + + +RD +DY
Sbjct: 237 GEEVTQADMAVRYAEYFPQFIAKGVQNELLDEKLQQF---DLARLGAALKPERDLKFDYL 293
Query: 147 GFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASP 203
G +TL Y L V+ + +E PQ MRVA+G+ ++ID AI+ Y ++S F ++P
Sbjct: 294 GLQTLFDRYFLHVRKQRIELPQAFFMRVAMGLSLNEIDREERAIEFYEILSSFDFMSSTP 353
Query: 204 TLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIR 263
TLFNAGT R+QLSSC+L + DD + GIYD +KE A++SK AGG+G +RA G++I+
Sbjct: 354 TLFNAGTLRSQLSSCYLTTVADD-LGGIYDAIKENALLSKFAGGLGNDWTPVRALGAHIK 412
Query: 264 GTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEH 323
GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G +
Sbjct: 413 GTNGESQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRR 471
Query: 324 RARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EG 378
R D+ A W+PDLFM RV G W+LF P++ P L D +G +FE++YT YE E
Sbjct: 472 RTHDMNTANWIPDLFMRRVMEKGSWTLFSPSDTPDLHDKFGKDFEKIYTAYEAKAERGEI 531
Query: 379 KAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSP 438
K + VQA ++W ++L ETG P++ FKD CN +S QQ+ G + SSNLCTE+ TS
Sbjct: 532 KPSRKVQATDMWRKMLSMLFETGHPWITFKDACNVRSPQQHAGVVHSSNLCTEITLNTSD 591
Query: 439 TETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNK 498
TETAVCNL S+ L +++++ V D EKL + L+
Sbjct: 592 TETAVCNLGSVNLVQHLKDGAV--------------------DHEKLKKTITTAMRMLDN 631
Query: 499 IIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHA 558
+ID+NYY V+ AR SN+RHRP+G+G+ G D L +P+ S EA + E + YHA
Sbjct: 632 VIDINYYAVKKARDSNMRHRPVGLGIMGFQDCLYELRVPYASQEAVEFADKSMEAVCYHA 691
Query: 559 LRTSSEIAAREGPYETYHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRDMI 607
S+E+A G Y +Y GS KG+L D ++ S DW LR I
Sbjct: 692 YWASTELAKERGKYASYKGSLWDKGVLPLDTLDMLAEQRGGYVEIDRSATLDWEALRKKI 751
Query: 608 SKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEM 667
+K+G+RNS VA PTA+ S I+G + C EP N+ + LSGEF V+N +L+ DL +
Sbjct: 752 AKDGMRNSNCVAIAPTATISNIIGVDACIEPCFGNLSVKSNLSGEFTVINHYLVRDLKRL 811
Query: 668 GLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSL 727
LW ++ + + DGS++ I ++P+++KA+Y T +EI+ +V+ A R +ID +QSL
Sbjct: 812 NLWDDVMVVDLKHFDGSLRPIDRVPQDVKALYATAFEIETSWIVEAAARRQKWIDQAQSL 871
Query: 728 NIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTV 771
NI+M + KL + AWLRGLKT YYLR+++A A K TV
Sbjct: 872 NIYMAGASGKKLDDTYKLAWLRGLKT-TYYLRTQSATHAEKSTV 914
>gi|430808366|ref|ZP_19435481.1| ribonucleotide-diphosphate reductase subunit alpha [Cupriavidus sp.
HMR-1]
gi|429499277|gb|EKZ97715.1| ribonucleotide-diphosphate reductase subunit alpha [Cupriavidus sp.
HMR-1]
Length = 979
Score = 543 bits (1398), Expect = e-151, Method: Compositional matrix adjust.
Identities = 312/770 (40%), Positives = 435/770 (56%), Gaps = 53/770 (6%)
Query: 34 CDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKN---- 89
+P+L ++ +Y GV +Q+ + A A + P Y+ + ARI++ + K
Sbjct: 189 AEPIL--KETLKNLYDGVPMTQVYDSAILAARTLIEKDPAYSQVTARILLHTIRKEILGA 246
Query: 90 --TKKSFSETIKDMYNHYNERSGLKAPLIADDV--YDIIMKNAARLDSEIIYDRDFDYDY 145
T+ + + + + R G++A L+ + + YD+ ARL + + RDF ++Y
Sbjct: 247 EVTQTEMATKYAEYFPKFIAR-GIEAELLDEKLATYDL-----ARLGAALDASRDFQFNY 300
Query: 146 FGFKTLERSYLLKVQGKVVERPQHMLMRVAVGI---HKDDIDSAIKTYHMMSQRWFTHAS 202
G +TL Y L V +E PQ MRVA+G+ KD AI+ Y ++S F ++
Sbjct: 301 LGLQTLYDRYFLHVDEVRIEMPQAFFMRVAMGLALEEKDREARAIEFYQLLSSFDFMSST 360
Query: 203 PTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYI 262
PTLFN+GT R+QLSSC+L + DD +EGIY+ LKE A++SK AGG+G N+RA GS+I
Sbjct: 361 PTLFNSGTRRSQLSSCYLTTVSDD-LEGIYEALKENALLSKFAGGLGNDWTNVRALGSHI 419
Query: 263 RGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEE 322
+GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G +
Sbjct: 420 KGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDR 478
Query: 323 HRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----E 377
R D+ A W+PDLFM+RV NG W+LF P P L D G FE+ Y YE E
Sbjct: 479 RRTHDMNTANWIPDLFMKRVMENGEWTLFSPASCPDLHDKVGKAFEQAYLGYEAKAANGE 538
Query: 378 GKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTS 437
K K V A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ T+
Sbjct: 539 LKLFKKVPAMQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTN 598
Query: 438 PTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLN 497
+E AVCNL S+ L ++ + + D KL + L+
Sbjct: 599 ESEIAVCNLGSVNLVAHLMQ---------------QADGTYVLDHAKLQKTIRTAMRMLD 643
Query: 498 KIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYH 557
+ID+NYY VE AR SNLRHRP+G+G+ G D +L P+ S A + E + Y+
Sbjct: 644 NVIDINYYAVEKARNSNLRHRPVGMGIMGFQDCLHVLRTPYASDAAVKFADTSMEAVCYY 703
Query: 558 ALRTSSEIAAREGPYETYHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRDM 606
A + S+E+A G Y TY GS +GIL D V+ S DW LR
Sbjct: 704 AYQASTELAEERGRYSTYEGSLWDRGILPQDSLKLLAEERGGYLEVDLSSTMDWDSLRGR 763
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
I ++G+RNS +A PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL E
Sbjct: 764 IKQHGMRNSNCIAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNDYLVRDLKE 823
Query: 667 MGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQS 726
GLW ++ + Y DGS+ +I +IP++L+ IY T +E++ LV+ A R +ID +QS
Sbjct: 824 RGLWDEVMVADLKYFDGSLARIDRIPQDLRDIYATAFEVEPTWLVEAASRRQKWIDQAQS 883
Query: 727 LNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
LNI+M + KL + AWLRGLKT YYLR+ AA K TV L
Sbjct: 884 LNIYMAGASGKKLDDTYKLAWLRGLKT-TYYLRTMAATHVEKSTVQRGSL 932
>gi|94312019|ref|YP_585229.1| ribonucleotide-diphosphate reductase subunit alpha [Cupriavidus
metallidurans CH34]
gi|93355871|gb|ABF09960.1| Ribonucleoside-diphosphate reductase alpha subunit [Cupriavidus
metallidurans CH34]
Length = 979
Score = 542 bits (1397), Expect = e-151, Method: Compositional matrix adjust.
Identities = 314/770 (40%), Positives = 434/770 (56%), Gaps = 53/770 (6%)
Query: 34 CDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKS 93
+P+L ++ +Y GV +Q+ + A A + P Y+ + ARI++ + K +
Sbjct: 189 AEPIL--KETLKNLYDGVPMTQVYDSAILAARTLIEKDPAYSQVTARILLHTIRKEILGA 246
Query: 94 FSETIKDMYNHYNE------RSGLKAPLIADDV--YDIIMKNAARLDSEIIYDRDFDYDY 145
T +M Y E G++A L+ + + YD+ ARL + + RDF ++Y
Sbjct: 247 -EVTQTEMATKYAEYFPKFIARGIEAELLDEKLATYDL-----ARLGAALDASRDFQFNY 300
Query: 146 FGFKTLERSYLLKVQGKVVERPQHMLMRVAVGI---HKDDIDSAIKTYHMMSQRWFTHAS 202
G +TL Y L V +E PQ MRVA+G+ KD AI+ Y ++S F ++
Sbjct: 301 LGLQTLYDRYFLHVDEVRIEMPQAFFMRVAMGLALEEKDREARAIEFYQLLSSFDFMSST 360
Query: 203 PTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYI 262
PTLFN+GT R+QLSSC+L + DD +EGIY+ LKE A++SK AGG+G N+RA GS+I
Sbjct: 361 PTLFNSGTRRSQLSSCYLTTVSDD-LEGIYEALKENALLSKFAGGLGNDWTNVRALGSHI 419
Query: 263 RGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEE 322
+GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G +
Sbjct: 420 KGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDR 478
Query: 323 HRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----E 377
R D+ A W+PDLFM+RV NG W+LF P P L D G FE+ Y YE E
Sbjct: 479 RRTHDMNTANWIPDLFMKRVMENGEWTLFSPASCPDLHDKVGKAFEQAYLGYEAKAANGE 538
Query: 378 GKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTS 437
K K V A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ T+
Sbjct: 539 LKLFKKVPAMQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTN 598
Query: 438 PTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLN 497
+E AVCNL S+ L ++ + + D KL + L+
Sbjct: 599 ESEIAVCNLGSVNLVAHLMQ---------------QADGTYVLDHAKLQKTIRTAMRMLD 643
Query: 498 KIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYH 557
+ID+NYY VE AR SNLRHRP+G+G+ G D +L P+ S A + E + Y+
Sbjct: 644 NVIDINYYAVEKARNSNLRHRPVGMGIMGFQDCLHVLRTPYASDAAVKFADTSMEAVCYY 703
Query: 558 ALRTSSEIAAREGPYETYHGSPVSKGILQPD-----------MWGVNPSDRWDWGGLRDM 606
A + S+E+A G Y TY GS +GIL D V+ S DW LR
Sbjct: 704 AYQASTELAEERGRYSTYEGSLWDRGILPQDSLKLLAEERGGYLDVDLSSTMDWDSLRGR 763
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
I ++G+RNS +A PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL E
Sbjct: 764 IKQHGMRNSNCIAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNDYLVRDLKE 823
Query: 667 MGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQS 726
GLW ++ + Y DGS+ +I +IP++L+ IY T +E++ LV+ A R +ID +QS
Sbjct: 824 RGLWDEVMVADLKYFDGSLARIDRIPQDLRDIYATAFEVEPTWLVEAASRRQKWIDQAQS 883
Query: 727 LNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
LNI+M + KL + AWLRGLKT YYLR+ AA K TV L
Sbjct: 884 LNIYMAGASGKKLDDTYKLAWLRGLKT-TYYLRTMAATHVEKSTVQRGSL 932
>gi|289208616|ref|YP_003460682.1| ribonucleoside-diphosphate reductase subunit alpha
[Thioalkalivibrio sp. K90mix]
gi|288944247|gb|ADC71946.1| ribonucleoside-diphosphate reductase, alpha subunit
[Thioalkalivibrio sp. K90mix]
Length = 964
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 314/842 (37%), Positives = 467/842 (55%), Gaps = 67/842 (7%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
+ V + DG Q + ++ A + + G IEH D + + ++ GV +
Sbjct: 153 LNVTRADGTQAPLDEARLQAVVAEACDG--IEHVDGEKILTEARRNLFDGVAEKDVATAL 210
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKN------------TKKSFSETIKDMYNHYNER 108
A M P+Y+ + AR+++ L + T+ +E + + Y R
Sbjct: 211 VMAARVMIEKEPNYSEVTARLLMDALRREALSFVHGRPEEATQAQLAERYAEYFGAYIRR 270
Query: 109 SGLKAPLIADDV--YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVER 166
+ L+ ++ YD+ +L + I +RD + Y G +TL Y + G E
Sbjct: 271 AA-DLELVDSELTRYDL-----DKLGAAIKPERDLQFTYLGLQTLYDRYFIHSDGTRFEL 324
Query: 167 PQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCM 223
PQ MRVA+G+ ++ID AI+ Y+++S F ++PTLFN+GT R QLSSC+L +
Sbjct: 325 PQAFFMRVAMGLAINEIDREARAIEFYNLLSSFDFMSSTPTLFNSGTLRPQLSSCYLTSV 384
Query: 224 KDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTA 283
DD ++GIY +++ A++SK AGG+G +R G++I+GTNG S G+VP L+V NDTA
Sbjct: 385 PDD-LDGIYSAIRDNALLSKFAGGLGNDWTRVRGMGAHIKGTNGKSQGVVPFLKVANDTA 443
Query: 284 RYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQ 343
V+QGG KRKGA YLE WH D+ EF++LRKN G + R D+ A W+PDLFM+RV
Sbjct: 444 VAVNQGG-KRKGAVCAYLETWHIDVEEFIELRKNTGDDRRRTHDMNSANWIPDLFMKRVA 502
Query: 344 SNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQI 398
+G W+LF PNE P L D GT+FE+ Y +YE+ E + K ++A +LW ++L
Sbjct: 503 EDGDWTLFSPNETPDLHDLVGTDFEKRYCEYEEKAARGELRVHKTMKAVDLWRKMLGMLF 562
Query: 399 ETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREM 458
ETG P+M FKD CN +S QQ+ G + SSNLCTE+ TS E AVCNL SI L ++ E
Sbjct: 563 ETGHPWMTFKDPCNLRSPQQHTGVVHSSNLCTEITLNTSDDEIAVCNLGSINLAAHINEA 622
Query: 459 GVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHR 518
G D +KL + L+ +ID NYY V ARRSNLRHR
Sbjct: 623 G-------------------ELDQDKLEQTVNTAMRMLDNVIDYNYYSVPQARRSNLRHR 663
Query: 519 PIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGS 578
P+G+G+ G D L MP+ S A + E + Y+A++ S+++A G YE++ GS
Sbjct: 664 PVGLGIMGFQDALYKLRMPYASEAAVEFADTSMEAVSYYAIKASTDLAEERGRYESFPGS 723
Query: 579 PVSKGIL-----------QPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTS 627
S+GIL + D ++ + R +W LR + K G+RNS +A PTA+ S
Sbjct: 724 LWSQGILPIDSVEKLAETRGDYLQMDTTQRLEWDKLRKRVKKVGMRNSNTMAIAPTATIS 783
Query: 628 QILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQK 687
I G ++ EP N++ + LSGEF V+N +L+ DL + LW ++ N + Y DGSVQ
Sbjct: 784 NICGVSQSIEPTYQNLFVKSNLSGEFTVINPYLVRDLKDRELWDEVMVNDLKYYDGSVQP 843
Query: 688 IPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAW 747
+ ++P++LKA+Y T +E+ + LV+ A R +ID +QSLN++M +P+ KL +L+ AW
Sbjct: 844 LDRVPDDLKALYATAFELDTRWLVEAASRRQKWIDQAQSLNLYMAEPSGPKLDALYKLAW 903
Query: 748 LRGLKTGMYYLRSRAAADAIKFTV-DTSVLKENPKVTDDDDAK--MAQMVCSLTNREECM 804
+RGLKT YYLRS A K TV D+S + V+ A A CS+ + +C
Sbjct: 904 VRGLKT-TYYLRSMGATHVEKSTVADSSRANKLNAVSGGQQASEPEAPKACSILD-PDCE 961
Query: 805 AC 806
AC
Sbjct: 962 AC 963
>gi|295677727|ref|YP_003606251.1| ribonucleoside-diphosphate reductase subunit alpha [Burkholderia
sp. CCGE1002]
gi|295437570|gb|ADG16740.1| ribonucleoside-diphosphate reductase, alpha subunit [Burkholderia
sp. CCGE1002]
Length = 1003
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 307/755 (40%), Positives = 429/755 (56%), Gaps = 47/755 (6%)
Query: 47 VYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKN------TKKSFSETIKD 100
+Y GV SQ+ + A A M P Y+ + ARI++ + + T+ E +
Sbjct: 196 LYDGVPMSQVYDSAILAARTMIEKDPAYSQVTARILLHTIRREILEEEVTQAEMGERYAE 255
Query: 101 MYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQ 160
+ + +R G++A L+ D + +K RL + + +RD + Y G +TL Y L
Sbjct: 256 YFPQFIKR-GVQAELLDDKLLQFDLK---RLGAALDANRDLQFGYLGLQTLYDRYFLHHD 311
Query: 161 GKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSS 217
+E PQ MRVA+G+ ++ID AI+ Y+++S F ++PTLFN+GT R+QLSS
Sbjct: 312 NVRIEMPQAFFMRVAMGLSLNEIDREARAIEFYNVLSSFDFMSSTPTLFNSGTRRSQLSS 371
Query: 218 CFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLR 277
C+L + DD ++GIY+ LKE A++SK AGG+G +RA GS+I+GTNG S G+VP L+
Sbjct: 372 CYLTTV-DDDLDGIYEALKENALLSKFAGGLGNDWTRVRALGSHIKGTNGKSQGVVPFLK 430
Query: 278 VFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDL 337
V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R D+ A W+PDL
Sbjct: 431 VVNDTAVAVNQGG-KRKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDL 489
Query: 338 FMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFE 392
FM+RV G W+LF P+ P L D +G EFE YT YE E K K + A LW +
Sbjct: 490 FMKRVMEGGDWTLFSPSTCPDLHDKFGAEFETAYTAYEDKVARGEIKLFKKIPAAQLWRK 549
Query: 393 ILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALP 452
+L ETG P++ FKD CN +S QQ++G + SSNLCTE+ TS E AVCNL S+ L
Sbjct: 550 MLGMLFETGHPWITFKDPCNVRSPQQHVGVVHSSNLCTEITLNTSDAEIAVCNLGSVNLV 609
Query: 453 RYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARR 512
+++E + D +KL + L+ +ID+NYY V AR
Sbjct: 610 AHLKE---------------QADGTVALDHDKLKRTISVAMRMLDNVIDINYYAVAKARN 654
Query: 513 SNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPY 572
SNL+HRP+G+G+ G D +L P+ S EA + E + Y+A S+E+A G Y
Sbjct: 655 SNLKHRPVGLGIMGFQDCLHVLRTPYASPEAVEFADRSMEAVCYYAYYASTELAEERGRY 714
Query: 573 ETYHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRDMISKNGVRNSLLVAPM 621
+Y GS +GIL D V+ S+ DW LR I+ G+RNS VA
Sbjct: 715 SSYRGSLWDRGILPQDSVALLAEARGGYVEVDSSESMDWPALRSRIATYGMRNSNCVAIA 774
Query: 622 PTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYD 681
PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL GLW ++ + Y
Sbjct: 775 PTATISNIIGVSACIEPTYQNLYVKSNLSGEFTVVNDYLVRDLKARGLWDEVMVADLKYF 834
Query: 682 DGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTS 741
DG++ +I +IP +L+AIY T +E+ LV+ A R +ID +QSLNI+M + KL
Sbjct: 835 DGTLSRIDRIPADLRAIYATAFEVDPVWLVESASRRQKWIDQAQSLNIYMAGASGKKLDE 894
Query: 742 LHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
++ AWLRGLKT YYLR+ AA K TV L
Sbjct: 895 IYKLAWLRGLKT-TYYLRTMAATHVEKSTVAHGAL 928
>gi|254483512|ref|ZP_05096739.1| ribonucleoside-diphosphate reductase, alpha subunit, putative
[marine gamma proteobacterium HTCC2148]
gi|214036233|gb|EEB76913.1| ribonucleoside-diphosphate reductase, alpha subunit, putative
[marine gamma proteobacterium HTCC2148]
Length = 958
Score = 542 bits (1396), Expect = e-151, Method: Compositional matrix adjust.
Identities = 316/836 (37%), Positives = 457/836 (54%), Gaps = 65/836 (7%)
Query: 3 VVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAE 62
V++ DG + A+ D++ + + + L E + + +Y GVT +L
Sbjct: 155 VIQPDGSRVALDLDRLHTVVSEACFEL--EDVVESAILDEALKNLYDGVTAEELATSLVI 212
Query: 63 TAAAMTTNHPDYASLAARIVVSNLHKNTKK----SFSETIKDMYNHYNER------SGLK 112
TA M P+Y+ +AAR++ NL + + T DM Y + G++
Sbjct: 213 TARTMIEQDPNYSYVAARLLCDNLRAEALSFLGVATNATQADMGQLYAKALPAYIARGIE 272
Query: 113 APLIADDV--YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHM 170
L++ ++ YD+ RL ++ +RD + Y G +TL Y + E PQ
Sbjct: 273 LELLSPNLAGYDL-----QRLGEALLPERDLQFTYLGLQTLYDRYFIHSDETRFELPQVF 327
Query: 171 LMRVAVGIHKDDI---DSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDS 227
MRVA+G+ ++ D AI+ Y ++S + ++PTLFNAGT R QLSSC+L + DD
Sbjct: 328 FMRVAMGLAAEEANRNDRAIEFYELLSSFDYMSSTPTLFNAGTLRPQLSSCYLTTVPDD- 386
Query: 228 IEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVD 287
+ GIY +++ A++SK AGG+G +RA G+YI+GTNG S GIVP L+V NDTA V+
Sbjct: 387 LHGIYGAIQDNAMLSKFAGGLGNDWTPVRALGAYIKGTNGKSQGIVPFLKVVNDTAVAVN 446
Query: 288 QGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGL 347
QGG KRKGA YLE WH D+ EF++LRKN G + R D+ A W+PDLFM+RV +
Sbjct: 447 QGG-KRKGAVCAYLETWHMDVEEFVELRKNTGDDRRRTHDMNTANWIPDLFMKRVFNGED 505
Query: 348 WSLFCPNEAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQIETGT 402
W+LF P++ P L D +G FE+ Y YE E K K V+A+NLW ++L ETG
Sbjct: 506 WTLFSPSDVPDLHDLYGVAFEQRYAHYEAMAAAGEIKLFKTVKAENLWRKMLGMLFETGH 565
Query: 403 PYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPM 462
P+M FKD CN +S QQ++G + SSNLCTE+ T+ E AVCNL S+ LP+++ E G+
Sbjct: 566 PWMTFKDPCNLRSPQQHVGVVHSSNLCTEITLNTNKDEIAVCNLGSVNLPQHIDENGL-- 623
Query: 463 ESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGI 522
+ EKL L+ +ID+NYY V A+ SNL HRP+G+
Sbjct: 624 ------------------NLEKLRNTVRTAVRMLDNVIDINYYSVPQAKNSNLMHRPVGL 665
Query: 523 GVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSK 582
G+ G D + + S +A E I Y+A+ SSE+AA G Y +Y GS S+
Sbjct: 666 GLMGFQDALYKQHLAYGSEQAVSFADHSMEAISYYAIEASSELAAERGAYSSYEGSLWSQ 725
Query: 583 GILQ------------PDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQIL 630
G+ D V+ ++ DW LR + +NG+RNS ++A PTA+ + I
Sbjct: 726 GVFPIDSLQRLIDERGADYIQVDQTESMDWQALRSQVQQNGMRNSNVMAIAPTATIANIT 785
Query: 631 GNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQ 690
G ++ EP N+Y + LSGEF VVN +L+ DL E GLW ++ N + Y DGSVQ I +
Sbjct: 786 GVSQSIEPTYQNLYVKSNLSGEFTVVNPYLVRDLKERGLWDGVMVNDLKYYDGSVQAIDR 845
Query: 691 IPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRG 750
IP ++K IY T +E++ + LVD A R +ID +QSLN++++ N KL + AW G
Sbjct: 846 IPADIKGIYSTAFEVEPRWLVDAASRRQKWIDQAQSLNLYINNANGKKLDITYRMAWYSG 905
Query: 751 LKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
LKT YYLRS AA K T+DT L N + CSL + +C AC
Sbjct: 906 LKT-TYYLRSLAATGTEKSTIDTGTL--NAVSNEAAGPAPVPQACSLDD-PDCEAC 957
>gi|171057073|ref|YP_001789422.1| ribonucleotide-diphosphate reductase subunit alpha [Leptothrix
cholodnii SP-6]
gi|170774518|gb|ACB32657.1| ribonucleoside-diphosphate reductase, alpha subunit [Leptothrix
cholodnii SP-6]
Length = 958
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 304/761 (39%), Positives = 438/761 (57%), Gaps = 54/761 (7%)
Query: 36 PVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKN------ 89
PVL + +Y GV+ ++ + + A + P Y+ + AR+++ + ++
Sbjct: 182 PVLAETR--RNLYDGVSIDEVYKASILAARTLIEKDPSYSRVTARLLMHTIRRDVLGEEV 239
Query: 90 TKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFK 149
T+ + D + + ++ G+ A L+ + + + ARL + + +RD ++DY G +
Sbjct: 240 TQAEMAARYADYFPAFIKK-GVDAELLDERMAQF---DLARLGAALKAERDLNFDYLGLQ 295
Query: 150 TLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASPTLF 206
TL Y L ++ + +E PQ MRVA+G+ ++ID AI+ Y ++S F ++PTLF
Sbjct: 296 TLYDRYFLHIRKQRIEMPQAFFMRVAMGLALNEIDREARAIEFYEVLSAFDFMSSTPTLF 355
Query: 207 NAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTN 266
NAGT R+QLSSC+L + DD +EGIYD +K+ A++SK AGG+G +RA GS+I+GTN
Sbjct: 356 NAGTRRSQLSSCYLTTVPDD-LEGIYDAIKDNALLSKFAGGLGNDWTPVRALGSHIKGTN 414
Query: 267 GTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRAR 326
G S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R
Sbjct: 415 GESQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTH 473
Query: 327 DLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKV--- 383
D+ A W+PDLFM+RV G W+LF P P L D +GT FE YT YE ++
Sbjct: 474 DMNTANWIPDLFMKRVMEGGDWTLFSPANCPDLHDLFGTAFEAAYTAYEARADRGEITFF 533
Query: 384 --VQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTET 441
V+A +LW +IL ETG P++ FKD CN +S QQ++G + SSNLCTE+ T+ E
Sbjct: 534 KRVRAVDLWRKILSMLFETGHPWITFKDACNVRSPQQHVGVVHSSNLCTEITLNTNAGEI 593
Query: 442 AVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIID 501
AVCNL S+ L ++V++ V D KL L+ +ID
Sbjct: 594 AVCNLGSVNLAQHVKDGEV--------------------DQAKLCRTVTTAMRMLDNVID 633
Query: 502 VNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRT 561
+NYY V+ AR SNLRHRP+G+G+ G D L +P+ S EA + E + YHA
Sbjct: 634 INYYAVKKARDSNLRHRPVGLGIMGFQDALYQLRVPYASNEAVEFADRSMEAVCYHAYWA 693
Query: 562 SSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDR-----------WDWGGLRDMISKN 610
S+E+AA G Y TY GS +GIL D + R DW LR I++
Sbjct: 694 STELAAERGRYATYRGSLWDRGILPIDSIALLAEQRGGYLDVDTRTTLDWDALRARIAQY 753
Query: 611 GVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLW 670
G+RNS VA PTA+ S I+G + EP N+ + LSGEF VVN++L+ DL +GLW
Sbjct: 754 GMRNSNCVAIAPTATISNIIGVDASIEPCFGNLSVKSNLSGEFTVVNEYLVRDLKALGLW 813
Query: 671 SPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIH 730
++ + + DGS+++I ++PEELK +Y T +E++ + LV+ A R +ID +QSLNI+
Sbjct: 814 DDVMVMDLKHFDGSLRRIDRVPEELKRLYATAFEVETQWLVEAAARRQKWIDQAQSLNIY 873
Query: 731 MDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTV 771
M + KL + AWLRGLKT YYLR+ A A K TV
Sbjct: 874 MAGASGKKLDETYKLAWLRGLKT-TYYLRTMGATHAEKSTV 913
>gi|226940722|ref|YP_002795796.1| NrdA [Laribacter hongkongensis HLHK9]
gi|226715649|gb|ACO74787.1| NrdA [Laribacter hongkongensis HLHK9]
Length = 917
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 312/827 (37%), Positives = 465/827 (56%), Gaps = 55/827 (6%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
++V + DG + + +++ +L+ +GL + P + +Y GVT ++++
Sbjct: 124 LHVTRPDGSRAPLDIERLGRQLEAACHGLEAD-TRPAALLADTLKNLYDGVTEAEVERAL 182
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIADDV 120
+A P Y + AR+++ + + + T +++ +R G++A L+ +
Sbjct: 183 ILSARQWIERDPAYDKVTARLLLDTIRREVAGGVAATYAEVFQQGIQR-GMQADLLDPRL 241
Query: 121 YDI-IMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIH 179
D + + AA LD E RD + Y G +TL Y L V G+ +E PQ MRVA+G+
Sbjct: 242 ADFDLPRLAAALDGE----RDRQFGYLGLQTLYDRYFLHVDGRRIEMPQTFFMRVAMGLA 297
Query: 180 KDDID---SAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLK 236
++ D A++ Y ++S+ F ++PTLFNAGT +QLSSC+L + D S++GI+D +K
Sbjct: 298 LNEADPTTQAMEFYDLLSRFDFMSSTPTLFNAGTRHSQLSSCYLTTIAD-SLDGIFDAIK 356
Query: 237 ECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGA 296
E A +SK AGG+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG KRKGA
Sbjct: 357 ENAQLSKFAGGLGNDWTPVRALGSHIKGTNGQSQGVVPFLKVANDTAVAVNQGG-KRKGA 415
Query: 297 FAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEA 356
YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV N W+LF P +
Sbjct: 416 VCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMQRVMENAEWTLFSPADV 475
Query: 357 PGLADCWGTEFERLYTKYEKEGKA-----KKVVQAQNLWFEILKSQIETGTPYMLFKDTC 411
P L D G F R Y +YE +A K ++A +LW ++L ETG P++ +KD C
Sbjct: 476 PDLHDLTGRAFARRYAEYEAMARADTLRNAKTLRAVDLWRKMLTMLFETGHPWLTWKDAC 535
Query: 412 NKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVG 471
N +S QQ++G + SSNLCTE+ TS E AVCNL S+ L +++E +
Sbjct: 536 NLRSPQQHVGRVHSSNLCTEITLNTSDDEIAVCNLGSVNLANHLKEGAL----------- 584
Query: 472 SRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTF 531
D EKLA + L+ +ID+N+YPVE AR +NLRHRP+G+GV G D
Sbjct: 585 ---------DQEKLARTVRVAMRMLDNVIDLNFYPVEKARTANLRHRPVGLGVMGFQDCL 635
Query: 532 ILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPD--- 588
LL +P+ S A + E I YHA S+E+A G Y ++ GS S+GIL D
Sbjct: 636 HLLRLPYGSQAAVGFADESMELIAYHAYLASTELAEMRGCYPSFEGSLWSQGILPQDSVE 695
Query: 589 --------MWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYT 640
V+ S R DW +R+ I++ G+RNS +A PTA+ + I+G + EP
Sbjct: 696 LLAAERQGYLEVDRSSRLDWTPVRERIARFGMRNSNCLAIAPTATIANIIGVSASIEPTY 755
Query: 641 SNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYK 700
N++ + LSGEF VVN+ L+ DL +GLW ++ + Y DG + I +IP+++K +Y
Sbjct: 756 KNLFVKSNLSGEFTVVNEFLVQDLKRLGLWDAVMLADLKYFDGDLAPIERIPQDIKTLYA 815
Query: 701 TVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRS 760
T +++ LV+ A R +ID +QSLN++M + KL +L+ AW+RGLKT YYLR+
Sbjct: 816 TAFDVDPGWLVEAASRRQKWIDQAQSLNLYMAGASGKKLDTLYKLAWVRGLKT-TYYLRT 874
Query: 761 RAAADAIKFTVDTSVLKENPKVTDDDDAKMAQ-MVCSLTNREECMAC 806
AA A K T L P + +A+ CS+ N +C AC
Sbjct: 875 LAATSAEKSTGRGGELNAVPI----EGGMVAEPKFCSIDN-PDCEAC 916
>gi|348617977|ref|ZP_08884510.1| Ribonucleoside-diphosphate reductase alpha subunit (Ribonucleotide
reductase) [Candidatus Glomeribacter gigasporarum BEG34]
gi|347816682|emb|CCD29168.1| Ribonucleoside-diphosphate reductase alpha subunit (Ribonucleotide
reductase) [Candidatus Glomeribacter gigasporarum BEG34]
Length = 950
Score = 541 bits (1394), Expect = e-151, Method: Compositional matrix adjust.
Identities = 319/830 (38%), Positives = 460/830 (55%), Gaps = 55/830 (6%)
Query: 7 DGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAA 66
DG + + D +TA + + GL P + ++ +Y+G Q+ + A A
Sbjct: 145 DGVRRPLDLDALTALIAQACEGLGAA-VKPEPIIEQTLKNLYEGAPLKQIYDSAILAART 203
Query: 67 MTTNHPDYASLAARIVVSNLHKNT--KKSFSETIKDMYNHYNE---RSGLKAPLIADDV- 120
+ P Y+ AARI++ L + K+ + Y Y + G++A L+ + +
Sbjct: 204 LIEQEPAYSRAAARILLHILRREALGKEVTHAQMAARYARYFPVFVQRGVRAGLLDEKLL 263
Query: 121 -YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIH 179
+D+ M L ++ RD + Y G +TL Y L + G +E PQ LMRVA+G+
Sbjct: 264 QFDLAM-----LGQALVAARDLQFSYLGLQTLYDRYFLHIDGARLELPQTFLMRVAMGLA 318
Query: 180 KDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLK 236
++ D A++ YH++S+ F ++PTLFNAGT R+QLSSC+L + DD +EGIY+ LK
Sbjct: 319 LNEADRNARAVEFYHLLSRFDFMSSTPTLFNAGTRRSQLSSCYLTTVADD-LEGIYEALK 377
Query: 237 ECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGA 296
E A++SK AGG+G +RA G++I+GTNG S G+VP L+V NDTA V+QGG KRKGA
Sbjct: 378 ENALLSKFAGGLGNDWTRVRALGAHIQGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGA 436
Query: 297 FAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEA 356
YLE WH DI EFL+LRKN G + RA D+ A W+PDLFM+RV ++ W+LF P++
Sbjct: 437 VCAYLETWHLDIEEFLELRKNTGDDRRRAHDMNTANWIPDLFMKRVLADAQWTLFSPSDC 496
Query: 357 PGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTC 411
P L + +G +FE Y YE+ E K K + A LW ++L ETG P++ FKD C
Sbjct: 497 PDLHEKYGADFEAAYLDYEEKAARGEIKLFKKMPAAQLWRKMLGMLFETGHPWVTFKDPC 556
Query: 412 NKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVG 471
N +S QQ++G + SSNLCTE+ T+ +E AVCNL SI L ++R
Sbjct: 557 NIRSPQQHVGVVHSSNLCTEITLNTNDSEIAVCNLGSINLVAHLR-------------AA 603
Query: 472 SRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTF 531
G+ D +KL + L+ +ID+NYY V AR SNL+HRP+G+G+ G D
Sbjct: 604 DNGALR--LDHDKLKKTIQTALRMLDNVIDINYYAVAKARDSNLKHRPVGLGIMGFQDCL 661
Query: 532 ILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWG 591
L +P+ S A + E + Y+A S+E+A G Y +Y GS S+GIL D
Sbjct: 662 HALRIPYASEVAVEFADRSMEAVCYYAYWASTELAQERGRYSSYDGSLWSRGILPQDTLA 721
Query: 592 -----------VNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYT 640
V+ S DW LR I++ G+RNS VA PTA+ S I+G + C EP
Sbjct: 722 LLAQARGGHVEVDESGTLDWEALRRRIARYGMRNSNCVAIAPTATISNIVGVSACIEPTY 781
Query: 641 SNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYK 700
N++ + LSGEF VVN++L+ DL LW ++ + Y DG + +I ++P +L+ +Y
Sbjct: 782 QNLFVKSNLSGEFTVVNEYLVRDLKARDLWDAVMIADLKYFDGMLARIDRVPADLRDLYA 841
Query: 701 TVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRS 760
T +EI K LV+ A R +ID SQSLNI+M + KL ++ AW RGLKT YYLR+
Sbjct: 842 TAFEIDPKWLVEAAARRQKWIDQSQSLNIYMAGASGKKLDEIYRLAWRRGLKT-TYYLRT 900
Query: 761 RAAADAIKFTVDTSVLKENPKVTDDDDAKMAQMVCSL----TNREECMAC 806
AA K TV L ++ + A A VC+L N E C C
Sbjct: 901 MAATHIEKSTVAHGALNA-VAMSSESSAHSAPQVCALRPDDVNFEACEVC 949
>gi|114332418|ref|YP_748640.1| ribonucleotide-diphosphate reductase subunit alpha [Nitrosomonas
eutropha C91]
gi|114309432|gb|ABI60675.1| ribonucleoside-diphosphate reductase, alpha subunit [Nitrosomonas
eutropha C91]
Length = 957
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 313/832 (37%), Positives = 466/832 (56%), Gaps = 57/832 (6%)
Query: 4 VKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAET 63
+ +G++ + ++TAR++ L + L+ + + +Y GV ++ + A +
Sbjct: 153 IVENGQRIPLDPSRLTARIESACQHLG-NVVNAGLIVKAMLRDLYDGVPAEEVRKSAILS 211
Query: 64 AAAMTTNHPDYASLAARIVVSNL-HKNTKKSFS-ETIKDMYNHYNE---RSGLKAPLIAD 118
A A+ P Y+ + AR+++ N+ H+ + S E ++ Y Y R G++A L+ +
Sbjct: 212 ARALIEKEPAYSFVTARLLLDNIRHEVLGEDVSHEAMQSRYADYFPGFIRQGMEAGLLDE 271
Query: 119 DVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGI 178
+ + ARL +I DRD + Y G +TL Y L + + +E PQ MRVA+G+
Sbjct: 272 RLGQF---DLARLSETLIADRDLQFGYLGLQTLYDRYFLHISERRIELPQAFFMRVAMGL 328
Query: 179 HKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTL 235
++ID AI+ YH++S F ++PTLFN+GT R+QLSSC+L + D S++GIY+ +
Sbjct: 329 ALNEIDREARAIEFYHLLSTFDFMSSTPTLFNSGTRRSQLSSCYLSTVPD-SLDGIYEAI 387
Query: 236 KECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG 295
KE A++SK AGG+G +RA G+ I+GTNG S G+VP L+V +DTA V+QGG KRKG
Sbjct: 388 KENALLSKFAGGLGNDWTPVRAMGARIKGTNGKSQGVVPFLKVVSDTAVAVNQGG-KRKG 446
Query: 296 AFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNE 355
A YLE WH DI EFL+LRKN G + R D+ A+WVPDLFM+R+ + W+LF P++
Sbjct: 447 AVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTAVWVPDLFMKRMLEDQEWTLFSPSD 506
Query: 356 APGLADCWGTEFERLYTKYEKEGKAKKV-----VQAQNLWFEILKSQIETGTPYMLFKDT 410
P L + +G FE Y YE++ ++ + A+ LW ++L ETG P++ FKD
Sbjct: 507 TPDLHEKYGKAFEEAYIAYEEQATQGRLALHKRIPARQLWRKMLTMLFETGHPWITFKDP 566
Query: 411 CNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLV 470
CN +S Q ++G + SSNLCTE+ T+ E AVCNL SI LP ++ + KL
Sbjct: 567 CNIRSPQNHVGVVHSSNLCTEITLNTNEKEIAVCNLGSINLPAHIVD---------GKL- 616
Query: 471 GSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADT 530
D KL + L+ +ID+N+Y V AR +NLRHRP+G+G+ G D
Sbjct: 617 ----------DLTKLKQTVATAMRMLDNVIDINFYAVAKARNANLRHRPVGLGIMGFQDC 666
Query: 531 FILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMW 590
LG+ + S EA + E + YH S+E+A G Y TYHGS +GIL D
Sbjct: 667 LHKLGISYASREAVEFADSSMEAVAYHTYWASTELAEERGTYATYHGSLWERGILPQDSL 726
Query: 591 G-----------VNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPY 639
V+ S DW LR+ I + G+RNS +A PTA+ S I+G + EP
Sbjct: 727 ALLQEERGGHVEVDTSSTLDWTPLRERIKQYGMRNSNCLAIAPTATISNIIGVSASIEPT 786
Query: 640 TSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIY 699
N+Y + LSGEF VVN+ L++DL + LW ++ + + DG+ KI +IPE L+A+Y
Sbjct: 787 YQNLYVKSNLSGEFTVVNQSLVNDLKKQDLWDEVMIADLKHYDGAASKIDRIPENLRALY 846
Query: 700 KTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLR 759
T +EI + LV+ A R +ID +QSLN++M + K+ L+ AWLRGLKT YYLR
Sbjct: 847 ATAFEIDPRWLVEAAARRQKWIDQAQSLNLYMSGASGKKMDDLYRLAWLRGLKT-TYYLR 905
Query: 760 SRAAADAIKFTVDTSVLKENPKVTDDDDAKMAQM-----VCSLTNREECMAC 806
+ A A K TV T L P + Q+ C++ + EC AC
Sbjct: 906 AMGATTAEKSTVHTGTLNAVPAQQNGHTDSSGQIHSATKQCAIDD-PECEAC 956
>gi|445499258|ref|ZP_21466113.1| ribonucleoside-diphosphate reductase subunit alpha
[Janthinobacterium sp. HH01]
gi|444789253|gb|ELX10801.1| ribonucleoside-diphosphate reductase subunit alpha
[Janthinobacterium sp. HH01]
Length = 975
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 308/796 (38%), Positives = 447/796 (56%), Gaps = 49/796 (6%)
Query: 4 VKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAET 63
V +G+++ + +++T + GL +H D + + +Y GV +L + A
Sbjct: 155 VLENGERKPLEMNRVTGLINAACIGLE-KHVDADAILAETLKNLYDGVPVEELHKSAILA 213
Query: 64 AAAMTTNHPDYASLAARIVVSNLHKNT--KKSFSETIKDMYNHYNERSGLKAPLIADDVY 121
A A+ P Y+ + ARI++ + K K+ Y Y + K IA+++
Sbjct: 214 ARALMEKDPAYSQVTARILLHTIRKEVFGKEVAQAAAAAEYVTYFPQYIAKG--IANELL 271
Query: 122 DIIMK--NAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIH 179
D + + ARL ++ DRD + Y G +TL Y L V+ +E PQ MRVA+G+
Sbjct: 272 DTKLAEFDLARLAKALVADRDLQFGYIGLQTLYDRYFLHVRDVRIEMPQAFYMRVAMGLA 331
Query: 180 KDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLK 236
++ D AI+ Y+++S F ++PTLFN+GT R+QLSSC+L + DD +EGIYD +K
Sbjct: 332 LNESDREARAIEFYNLLSTFDFMSSTPTLFNSGTLRSQLSSCYLTTVSDD-LEGIYDAIK 390
Query: 237 ECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGA 296
E A+++K AGG+G +RA G++I+GTNG S G+VP L+V NDTA V+QGG KRKGA
Sbjct: 391 ENALLAKFAGGLGNDWTPVRALGAHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGA 449
Query: 297 FAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEA 356
YLE WH DI EFLDLRKN G + R D+ A W+PD+FM+RV G W+LF P++
Sbjct: 450 VCAYLETWHMDIEEFLDLRKNTGDDRRRTHDMNTANWIPDMFMKRVMEKGEWTLFSPSDT 509
Query: 357 PGLADCWGTEFERLYTKYEKEGKAKKV-----VQAQNLWFEILKSQIETGTPYMLFKDTC 411
P L D G FE+ Y YE + A ++ + A +LW ++L ETG P++ FKD C
Sbjct: 510 PDLHDLVGKAFEKAYLGYEAKAAAGEIRVFKKIAALDLWRKMLSMLFETGHPWITFKDPC 569
Query: 412 NKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVG 471
N +S Q ++G + SSNLCTE+ T P E AVCNL S+ +P +++E KL
Sbjct: 570 NIRSPQSHVGMVHSSNLCTEITLNTGPDEIAVCNLGSVNMPAHMKE---------GKL-- 618
Query: 472 SRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTF 531
D KL + L+ +ID+NYY V+ AR +N+RHRP+G+GV G D
Sbjct: 619 ---------DHVKLKKTIRTAMRMLDNVIDINYYAVDKARNANMRHRPVGLGVMGFQDCL 669
Query: 532 ILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWG 591
++ +PF S EA E + Y+A S+E+A G Y++Y GS +GIL D
Sbjct: 670 HMMRIPFSSNEAVSFADTSMEAVCYYAYLASTELAEERGHYQSYKGSLWDRGILPQDSIK 729
Query: 592 VNPSDR-----------WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYT 640
+ +R DW +RD I K G+RNS VA PTA+ S I+G + C EP
Sbjct: 730 LLADERGGYLEQDTSAAMDWTPVRDRIKKFGMRNSNCVAIAPTATISNIIGVSACIEPTF 789
Query: 641 SNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYK 700
N+Y + LSGEF +N +L+ DL LW ++ + + Y DGS+ KI +IP++L+ IY
Sbjct: 790 QNLYVKSNLSGEFTEINAYLVRDLKARDLWDEVMISDLKYFDGSLAKIDRIPQDLRDIYA 849
Query: 701 TVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRS 760
T +E+ LV+ A R +ID +QSLNI+M + KL + AWLRGLKT YYLR+
Sbjct: 850 TAFEVSPTWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDETYKLAWLRGLKT-TYYLRT 908
Query: 761 RAAADAIKFTVDTSVL 776
+A K T T L
Sbjct: 909 TSATHTEKSTSKTGAL 924
>gi|406942476|gb|EKD74701.1| hypothetical protein ACD_44C00359G0004 [uncultured bacterium]
Length = 939
Score = 541 bits (1393), Expect = e-151, Method: Compositional matrix adjust.
Identities = 309/807 (38%), Positives = 451/807 (55%), Gaps = 61/807 (7%)
Query: 30 SIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHK- 88
++E DP L++++ +++G + + L + +A AM P+Y +AAR++++ L
Sbjct: 163 TLESVDPQLITKEAQRNLFQGASLTDLKKALQLSAKAMIEKEPNYGYVAARLLLAELRSE 222
Query: 89 ----------NTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYD 138
N+ +E ++H+ R G+ L+ + + +K +L + ++ D
Sbjct: 223 ALEFLQLPSINSSADMAEAYPRYFDHFIHR-GIDVELLDPRLANFNLK---KLGAALLAD 278
Query: 139 RDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGI---HKDDIDSAIKTYHMMSQ 195
RD ++Y G +TL Y L G E PQ MRVA+G+ +D + AI+ Y ++S
Sbjct: 279 RDLKFNYLGLQTLYDRYFLHHHGTHFELPQAFFMRVAMGLAMNEEDKENRAIEFYLLLSS 338
Query: 196 RWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNI 255
+ ++PTLFN+GT R QLSSCFL + DD ++ IY +K+ A++SK AGG+G +
Sbjct: 339 FDYMSSTPTLFNSGTLRPQLSSCFLSTVPDD-LDSIYGAIKDNALLSKFAGGLGNDWTPV 397
Query: 256 RATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLR 315
RA GS+I+GTNG S G+VP L V N +A V+QGG KR+GA YLE WH DI EFL+LR
Sbjct: 398 RAMGSHIKGTNGKSQGVVPFLNVANASAVAVNQGG-KRQGAVCAYLETWHLDIEEFLELR 456
Query: 316 KNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYE 375
KN G + R D+ A W+PDLFM+RV NG W+LF P+E P L D +G EFE++Y +YE
Sbjct: 457 KNTGDDRRRTHDMNTANWIPDLFMKRVHENGQWTLFSPSETPELHDLYGAEFEKVYIEYE 516
Query: 376 K-----EGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCT 430
E + K + A +LW ++L ETG P++ FKD CN +S QQ+ G I SSNLCT
Sbjct: 517 NKAARCELRQYKTIPAISLWRKMLSMLFETGHPWITFKDPCNLRSPQQHTGVIHSSNLCT 576
Query: 431 EVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTG 490
E+ TS E AVCNL SI L ++ + G+ + EKL +
Sbjct: 577 EITLNTSQDEIAVCNLGSINLSTHITDKGL--------------------NIEKLEKTVR 616
Query: 491 IVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDI 550
L+ +ID+NYY V ARRSNL+HRPIG+G+ G D+ L +P+ S A +
Sbjct: 617 TAIRMLDNVIDMNYYAVPQARRSNLKHRPIGLGLMGFQDSLYQLHIPYSSDMAVEFADRS 676
Query: 551 FETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPD-----------MWGVNPSDRWD 599
E I Y A++ S+E+A G Y ++ GS SKGIL D +N D
Sbjct: 677 MEYISYFAIKASNELAKERGSYASFEGSLWSKGILPIDSLELLQKERKQYLQLNKEKNLD 736
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR I G+RNS +A PTA+ S I G ++ EP N++ + LSGEF V+N +
Sbjct: 737 WETLRIAIRTTGMRNSNTMAIAPTATISNICGVSQSIEPTYQNLFVKSNLSGEFTVINPY 796
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
L+ DL + LW ++ N + Y +GS+ K+ ++P ELK +Y T +EI L++ A R
Sbjct: 797 LVADLKALNLWDDVMINDLKYFNGSLNKLTRVPTELKQLYATAFEIDPLWLIEAAARRQK 856
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN 779
+ID QSLN+++ Q + KL +L+ AWLRGLKT YYLR+ A +A K T+ L
Sbjct: 857 WIDQGQSLNLYLAQASGKKLDTLYRFAWLRGLKT-TYYLRTLGATNAEKSTIHDHALNAV 915
Query: 780 PKVTDDDDAKMAQMVCSLTNREECMAC 806
V A VCS+ N +C AC
Sbjct: 916 TTVA---TDTTAAKVCSI-NDPDCEAC 938
>gi|309783063|ref|ZP_07677782.1| ribonucleoside-diphosphate reductase, alpha subunit [Ralstonia sp.
5_7_47FAA]
gi|404397127|ref|ZP_10988920.1| ribonucleoside-diphosphate reductase, alpha subunit [Ralstonia sp.
5_2_56FAA]
gi|308918171|gb|EFP63849.1| ribonucleoside-diphosphate reductase, alpha subunit [Ralstonia sp.
5_7_47FAA]
gi|348610686|gb|EGY60372.1| ribonucleoside-diphosphate reductase, alpha subunit [Ralstonia sp.
5_2_56FAA]
Length = 994
Score = 540 bits (1392), Expect = e-151, Method: Compositional matrix adjust.
Identities = 308/770 (40%), Positives = 435/770 (56%), Gaps = 47/770 (6%)
Query: 32 EHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKN-- 89
E DP + ++ +Y+GV +Q+ + A + + P Y+ + ARI++ + +
Sbjct: 184 EAVDPEPILKETVKNLYEGVPMTQVYDSAILASRTLIEKDPAYSQVTARILLHTIRREIL 243
Query: 90 ----TKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDY 145
T+ S D + + ER G+ A L+ D + + ARL + + RDF ++Y
Sbjct: 244 GEEVTQAEMSTRYVDYFPQFIER-GINAELLDDKLAQF---DLARLGAALDASRDFQFNY 299
Query: 146 FGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHAS 202
G +TL Y L + +E PQ MRVA+G+ ++ID AI+ Y ++S F ++
Sbjct: 300 LGLQTLYDRYFLHINETRIEMPQAFFMRVAMGLALNEIDREARAIEFYQLLSSFDFMSST 359
Query: 203 PTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYI 262
PTLFN+GT R+QLSSC+L + DD ++GIY+ LKE A++SK AGG+G N+RA GS+I
Sbjct: 360 PTLFNSGTRRSQLSSCYLTTVSDD-LDGIYEALKENALLSKFAGGLGNDWTNVRALGSHI 418
Query: 263 RGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEE 322
+GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G +
Sbjct: 419 KGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDR 477
Query: 323 HRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----E 377
R D+ A W+PDLFM+RV G W+LF P+ P L D G FE+ Y YE E
Sbjct: 478 RRTHDMNTANWIPDLFMKRVMEGGEWTLFSPSTCPDLHDKVGKAFEQAYLAYEDKVARGE 537
Query: 378 GKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTS 437
K K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ T+
Sbjct: 538 IKLFKKMPALQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTN 597
Query: 438 PTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLN 497
+E AVCNL S+ L + + P V D EKL + L+
Sbjct: 598 DSEIAVCNLGSVNLVAH-------LVKQPDGSV--------VLDHEKLKKTVRTAMRMLD 642
Query: 498 KIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYH 557
+ID+NYY V+ AR SNLRHRP+G+G+ G D +L +P+ S A Q E + Y+
Sbjct: 643 NVIDINYYAVKKARDSNLRHRPVGMGIMGFQDALHVLRVPYASEAAVQFADTSMEAVCYY 702
Query: 558 ALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDR-----------WDWGGLRDM 606
A S+E+A G Y +Y GS +GIL D + +R DW LR
Sbjct: 703 AYWASTELAEERGRYSSYKGSLWDRGILPQDSLKLLAEERGGYLEADMSSTMDWDSLRGR 762
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
I + G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL
Sbjct: 763 IKQYGMRNSNCVAIAPTATISNIIGVSACIEPTYQNLYVKSNLSGEFTVVNDYLVRDLKA 822
Query: 667 MGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQS 726
GLW ++ + Y DGS+ +I +IP++L+ +Y T +E++ + LV+ A R +ID +QS
Sbjct: 823 RGLWDEVMVADLKYFDGSLARIDRIPQDLRDLYATAFEVEPQWLVEAASRRQKWIDQAQS 882
Query: 727 LNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
LNI+M + KL + AWLRGLKT YYLR+ A K TV L
Sbjct: 883 LNIYMAGASGKKLDDTYKLAWLRGLKT-TYYLRTIGATHVEKSTVSRGTL 931
>gi|88705572|ref|ZP_01103282.1| ribonucleoside-diphosphate reductase, alpha subunit [Congregibacter
litoralis KT71]
gi|88700085|gb|EAQ97194.1| ribonucleoside-diphosphate reductase, alpha subunit [Congregibacter
litoralis KT71]
Length = 969
Score = 540 bits (1391), Expect = e-150, Method: Compositional matrix adjust.
Identities = 318/809 (39%), Positives = 446/809 (55%), Gaps = 68/809 (8%)
Query: 3 VVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAE 62
VV+ DG + + +++ + + GL + + + +Y GV+ +L
Sbjct: 165 VVQLDGSKAPLDLERLHIIVSEACAGL--DDVSETRILDEALRNLYDGVSMQELSTSLVI 222
Query: 63 TAAAMTTNHPDYASLAARIVVSNLHKNTKKSF-----SETIKDMYNHYNE---------- 107
TA + P+Y +AR++ NL + SF S T DM Y +
Sbjct: 223 TARTLIEQEPNYTYASARLLCDNL-RTEALSFLGVADSATQGDMDRLYAKALPAYIARGV 281
Query: 108 RSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERP 167
L P +A+ YD+ R+ I+ +RD + Y G +TL Y + E P
Sbjct: 282 ELELLDPTLAE--YDL-----ERMGKAILPERDLQFTYLGLQTLYDRYFIHSDEVRFELP 334
Query: 168 QHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMK 224
Q MRVA+G+ ++ D AI+ Y ++S + ++PTLFNAGT R QLSSC+L +
Sbjct: 335 QIFFMRVAMGLAVEETDREARAIEFYRLLSSFDYMSSTPTLFNAGTLRPQLSSCYLTTVP 394
Query: 225 DDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTAR 284
DD + GIY +++ A++SK AGG+G +RA GSYI+GTNG S G+VP L+V NDTA
Sbjct: 395 DD-LHGIYGAIQDNAMLSKFAGGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAV 453
Query: 285 YVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQS 344
V+QGG KRKGA YLE WH DI EF++LRKN G + R D+ A W+PDLFM+RV
Sbjct: 454 AVNQGG-KRKGAVCSYLETWHMDIEEFVELRKNTGDDRRRTHDMNTANWIPDLFMKRVFD 512
Query: 345 NGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQIE 399
+G W+LF PN+ P L D +G FE Y YE E K K V+AQNLW ++L E
Sbjct: 513 DGDWTLFSPNDVPDLHDLYGKAFEERYCAYEAMAATGELKYSKTVKAQNLWRKMLGMLFE 572
Query: 400 TGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMG 459
TG P+M FKD CN +S QQ+ G + SSNLCTE+ TS E AVCNL SI LP++V E G
Sbjct: 573 TGHPWMTFKDPCNLRSPQQHAGVVHSSNLCTEITLNTSADEIAVCNLGSINLPQHVDENG 632
Query: 460 VPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRP 519
+ + EKLAE L+ +ID+NYY V+TAR SN RHRP
Sbjct: 633 L--------------------NLEKLAETVRTAVRMLDNVIDINYYSVDTARNSNFRHRP 672
Query: 520 IGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSP 579
+G+G+ G D + + S +A E I Y+A+ SS++A G YE+Y GS
Sbjct: 673 VGLGLMGFQDALYKQHIAYGSEDAVTFADRSMEAISYYAIDASSKLAEERGAYESYEGSL 732
Query: 580 VSKGILQPDMWG------------VNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTS 627
S+GIL D G V+ S DW LR+ + G+RNS ++A PTA+ +
Sbjct: 733 WSQGILPIDSLGKLVEERGSDYIKVDDSMTMDWTSLREAVKARGMRNSNVMAIAPTATIA 792
Query: 628 QILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQK 687
I G ++ EP N+Y + LSGEF VVN +L++DL GLW ++ N + Y DGSVQ
Sbjct: 793 NITGVSQSIEPTYQNLYVKSNLSGEFTVVNPYLVNDLKVRGLWDSVMVNDLKYYDGSVQA 852
Query: 688 IPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAW 747
I +IP +L+AIY +E++ + +V+ A R +ID +QSLN++++ + KL + AW
Sbjct: 853 IERIPADLRAIYSNAFEVEPRWIVECASRRQKWIDQAQSLNLYINNASGKKLDITYRMAW 912
Query: 748 LRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
GLKT YYLRS AA K T+DT L
Sbjct: 913 YSGLKT-TYYLRSLAATGTEKSTIDTGQL 940
>gi|152979866|ref|YP_001354669.1| ribonucleotide-diphosphate reductase subunit alpha
[Janthinobacterium sp. Marseille]
gi|151279943|gb|ABR88353.1| ribonucleoside-diphosphate reductase alpha chain [Janthinobacterium
sp. Marseille]
Length = 963
Score = 540 bits (1391), Expect = e-150, Method: Compositional matrix adjust.
Identities = 308/800 (38%), Positives = 452/800 (56%), Gaps = 57/800 (7%)
Query: 4 VKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAET 63
V DG++ + +++ + GL +H D + + +Y GV +L + A
Sbjct: 155 VTEDGQRRPLDMNQVRDLINAACIGLE-KHVDAEAILHETVKNLYDGVPVEELHKSAILA 213
Query: 64 AAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIK--DMYNHYNE------RSGLKAPL 115
A A+ P Y+++ AR++ +H K+ F + D Y E + G++A L
Sbjct: 214 ARALMEKDPAYSTVTARLL---MHTIRKEVFGLEVAQADAPAQYLEYFPKFIKKGIEAEL 270
Query: 116 IADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVA 175
+ + +K +L ++ +RD + Y G +TL Y L ++ +E PQ MRVA
Sbjct: 271 LDAKLGQFDLK---KLGDALVPERDLQFGYLGLQTLYDRYFLHIRDTRIEMPQAFYMRVA 327
Query: 176 VGIHKDDI---DSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIY 232
+G+ ++I + AI+ Y+++S F ++PTLFN+GT R+QLSSC+L + DD ++GIY
Sbjct: 328 MGLALNEINREERAIEFYNLLSSFDFMSSTPTLFNSGTQRSQLSSCYLTTVADD-LDGIY 386
Query: 233 DTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGK 292
+ +KE A+++K AGG+G +R+ G++I+GTNG S G+VP L+V NDTA V+QGG K
Sbjct: 387 EAIKENALLAKYAGGLGNDWTPVRSLGAHIKGTNGRSQGVVPFLKVVNDTAVAVNQGG-K 445
Query: 293 RKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFC 352
RKGA YLE WH DI EFLDLRKN G + R D+ A W+PDLFM+RV G W+LF
Sbjct: 446 RKGAVCAYLETWHMDIEEFLDLRKNTGDDRRRTHDMNTANWIPDLFMKRVMEKGEWTLFS 505
Query: 353 PNEAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQIETGTPYMLF 407
P++AP L D G FE YT YE E K K +QA +LW ++L ETG P++ F
Sbjct: 506 PSDAPDLHDKVGKAFEAAYTGYEAKAARGELKLFKKIQALDLWRKMLSMLFETGHPWITF 565
Query: 408 KDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPS 467
KD CN +S QQ++G + SSNLCTE+ T+ +E AVCNL S+ +P ++
Sbjct: 566 KDPCNIRSPQQHVGVVHSSNLCTEITLNTNDSEIAVCNLGSVNMPAHM------------ 613
Query: 468 KLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
K+ D KL + L+ +ID+NYY V+ AR SNLRHRP+G+G+ G
Sbjct: 614 --------KDGQLDHVKLQKTVRTAMRMLDNVIDINYYAVKKARDSNLRHRPVGLGIMGF 665
Query: 528 ADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQP 587
D ++ +P+ S EA Q E + Y+A S+E+A G Y +Y GS +GIL
Sbjct: 666 QDCLHMMRIPYASDEAVQFADRSMEAVCYYAYYASTELAEERGRYSSYRGSLWDRGILPQ 725
Query: 588 DMWGVNPSDR-----------WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
D + +R DW LR+ I + G+RNS VA PTA+ S I+G + C
Sbjct: 726 DSLKLLQEERGGYLEADLTETLDWTPLRERIKQFGMRNSNCVAIAPTATISNIIGVSACI 785
Query: 637 EPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELK 696
EP N+Y + LSGEF +N++L+ DL GLW ++ + + Y DGS+ KI +IP++L+
Sbjct: 786 EPTYQNLYVKSNLSGEFTEINEYLVRDLKARGLWDEVMISDLKYFDGSLAKIDRIPQDLR 845
Query: 697 AIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMY 756
IY T +E++ K LV+ A R +ID +QSLNI+M + KL + AWLRGLKT Y
Sbjct: 846 DIYSTAFEVEPKWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDDTYKLAWLRGLKT-TY 904
Query: 757 YLRSRAAADAIKFTVDTSVL 776
YLR+ A K T T L
Sbjct: 905 YLRTMGATHTEKSTSKTGAL 924
>gi|302877616|ref|YP_003846180.1| ribonucleoside-diphosphate reductase subunit alpha [Gallionella
capsiferriformans ES-2]
gi|302580405|gb|ADL54416.1| ribonucleoside-diphosphate reductase, alpha subunit [Gallionella
capsiferriformans ES-2]
Length = 944
Score = 540 bits (1390), Expect = e-150, Method: Compositional matrix adjust.
Identities = 319/831 (38%), Positives = 461/831 (55%), Gaps = 55/831 (6%)
Query: 3 VVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAE 62
V +DG + + +++ ++ GL E D LV Q +Y GV ++ +
Sbjct: 141 VTGKDGVVQPLDLARLSVLVQSACEGLG-EVVDAELVLQVALKDMYDGVPLHEVHKCLIL 199
Query: 63 TAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIK--DMYNHYNE------RSGLKAP 114
+A +M P Y + AR++++N+ + E + DM Y + + G+ A
Sbjct: 200 SARSMIEKEPAYNFVTARLLLNNI---CSEVLGEDVAPADMATRYADYFPKFIKRGIAAE 256
Query: 115 LIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRV 174
L+ + + + RL +E+ RD + Y G +TL Y L + G +E PQ MRV
Sbjct: 257 LLDEKLAGF---DLPRLAAELDASRDLQFGYLGLQTLYDRYFLHIGGTRIEAPQVFFMRV 313
Query: 175 AVGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGI 231
A+G+ ++ID AI+ Y ++S F ++PTLFN+G+ R+QLSSC+L ++D+ +EGI
Sbjct: 314 AMGLALNEIDREARAIEFYRLLSGFDFMCSTPTLFNSGSRRSQLSSCYLSTVEDN-LEGI 372
Query: 232 YDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGG 291
YD +K+ A+++K AGG+G +RA G++I+GTNG S G+VP L+V NDTA V+QGG
Sbjct: 373 YDAIKDNALLAKFAGGLGNDWTPVRALGAHIKGTNGESQGVVPFLKVVNDTAVAVNQGG- 431
Query: 292 KRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLF 351
KRKGA YLE WH DI EFLDLRKN G + R D+ + W+PDLFM+RV G W+LF
Sbjct: 432 KRKGAVCAYLETWHLDIEEFLDLRKNTGDDRRRTHDMNTSNWIPDLFMKRVMEGGNWTLF 491
Query: 352 CPNEAPGLADCWGTEFERLYTKYEKEGKAK-----KVVQAQNLWFEILKSQIETGTPYML 406
P++ L D +G +FE YT YE++ A K VQA +LW ++L ETG P++
Sbjct: 492 SPSDVKDLHDLFGIDFEIAYTAYEEKAAAGQIKLYKTVQAASLWRKMLTMLFETGHPWIT 551
Query: 407 FKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHP 466
FKD CN +S QQ++G + SSNLCTE+ T+ E AVCNL S+ LP ++ G
Sbjct: 552 FKDPCNIRSPQQHVGVVHSSNLCTEITLNTNADEIAVCNLGSVNLPAHLYPEG------- 604
Query: 467 SKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQG 526
L G D KL L+ +ID+NYY V AR SNL+HRP+G+G+ G
Sbjct: 605 HDLAGQ-------IDHAKLRRTINTAMRMLDNVIDINYYAVAKARNSNLKHRPVGMGIMG 657
Query: 527 LADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQ 586
D L +P+ S EA + E + Y+A S+E+A G Y +Y GS GIL
Sbjct: 658 FQDCLHQLRLPYSSMEAVEFADRSMEAVCYYAYWASTELAEERGRYASYKGSLWDCGILP 717
Query: 587 PDMWG-----------VNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNEC 635
D V+ S DW LR I + G+RNS VA PTA+ S I+G + C
Sbjct: 718 QDTLDLLREERGGYVEVDTSVSMDWDALRARIGQYGMRNSNCVAIAPTATISNIIGVSAC 777
Query: 636 FEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEEL 695
EP N++ + LSGEF V+N HL+ +L +GLW ++ + + Y DGS+ KI +IP EL
Sbjct: 778 IEPTYQNLFVKSNLSGEFTVINDHLVAELKRLGLWDEVMISDLKYFDGSLAKIDRIPAEL 837
Query: 696 KAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGM 755
+++Y T +E++ L++ A R +ID +QSLNI+M + KL + AW+RGLKT
Sbjct: 838 RSLYATAFEVEPSWLIEAASRRQKWIDQAQSLNIYMAGVSGRKLDDTYKLAWVRGLKT-T 896
Query: 756 YYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
YYLR+ A A K T L N D A+ Q CS+ N EC AC
Sbjct: 897 YYLRTLGATSAEKSTGRAGAL--NAVSVGDAPAETTQF-CSIDN-PECEAC 943
>gi|254282207|ref|ZP_04957175.1| ribonucleoside-diphosphate reductase, alpha subunit, putative
[gamma proteobacterium NOR51-B]
gi|219678410|gb|EED34759.1| ribonucleoside-diphosphate reductase, alpha subunit, putative
[gamma proteobacterium NOR51-B]
Length = 961
Score = 540 bits (1390), Expect = e-150, Method: Compositional matrix adjust.
Identities = 315/834 (37%), Positives = 449/834 (53%), Gaps = 59/834 (7%)
Query: 3 VVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAE 62
VV+ DG + + +++ + + GL+ + + +Y GV ++
Sbjct: 156 VVQADGSRSPLDIERVRTIVAEACEGLA--DVSEAAIIDEALRNLYDGVAAEEVSTALVI 213
Query: 63 TAAAMTTNHPDYASLAARIVVSNLHKNTKKSFS----ETIKDMYNHYNE------RSGLK 112
TA + P+Y+ AAR+++ NL T +DM HY + G++
Sbjct: 214 TARTLIEQEPNYSYAAARLLLDNLRAEGLSFMGVAELATQQDMTIHYPAALKAFIKRGIE 273
Query: 113 APLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLM 172
L+A D+ D ++ L S ++ +RD + Y G +TL Y + E PQ M
Sbjct: 274 LELLAPDLQDFDLE---ELGSALLPERDLQFSYLGLQTLYDRYFIHSDNTRFELPQIFFM 330
Query: 173 RVAVGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIE 229
RVA+G+ + AI+ Y ++S + ++PTLFNAGT R QLSSC+L + DD +
Sbjct: 331 RVAMGLAAREEAKNARAIEFYRLLSSFDYMSSTPTLFNAGTLRPQLSSCYLTTVPDD-LF 389
Query: 230 GIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQG 289
GIY +++ A++SK AGG+G +RA G+YI+GTNG S GIVP L+V NDTA V+QG
Sbjct: 390 GIYGAIQDNAMLSKFAGGLGNDWTPVRALGAYIKGTNGKSQGIVPFLKVVNDTAVAVNQG 449
Query: 290 GGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWS 349
G KRKGA YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV +G W+
Sbjct: 450 G-KRKGAVCAYLETWHMDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGDWT 508
Query: 350 LFCPNEAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQIETGTPY 404
LF PN+ P L D +G FE Y +YE E K K ++AQ+LW ++L ETG P+
Sbjct: 509 LFSPNDVPDLHDLYGKAFEERYQQYEAMAASGELKLHKTLKAQSLWRKMLGMIFETGHPW 568
Query: 405 MLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMES 464
M FKD CN +S QQ+ G + SSNLCTE+ TS E AVCNL S+ LP+++
Sbjct: 569 MTFKDPCNLRSPQQHCGVVHSSNLCTEITLNTSADEIAVCNLGSVNLPQHI--------- 619
Query: 465 HPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGV 524
+N + +KL L+ +ID+NYY V A +SN RHRPIG+GV
Sbjct: 620 -----------ENGVLNLDKLRSTIRTAIRMLDNVIDINYYSVPQAEQSNFRHRPIGMGV 668
Query: 525 QGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGI 584
G D L + + S +A E I Y+A+ SSE+A G Y +Y GS S+GI
Sbjct: 669 MGFQDALYKLDVAYGSDQAVSFADQSMEAISYYAIEASSELAEERGSYSSYEGSLWSQGI 728
Query: 585 LQ------------PDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGN 632
D VN DW L+ ++ NG+RNS ++A PTA+ + I G
Sbjct: 729 FPHDSLDLLIQHRGEDYIQVNRDQSMDWAPLKAKVAANGMRNSNVMAIAPTATIANITGV 788
Query: 633 NECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIP 692
++ EP N+Y + LSGEF VVN +L+ DL GLW ++ N + Y DGSVQ I +IP
Sbjct: 789 SQSIEPTYQNLYVKSNLSGEFTVVNPYLVKDLKARGLWDKVMVNDLKYYDGSVQAIDRIP 848
Query: 693 EELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLK 752
++LKA Y T +E++ + LVD A R +ID +QSLN++++ + KL + AW GLK
Sbjct: 849 DDLKAKYATAFEVEPRWLVDSASRRQKWIDQAQSLNLYINNASGKKLDVTYRMAWFNGLK 908
Query: 753 TGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
T YYLRS AA K TV++ L + CSL + +C AC
Sbjct: 909 T-TYYLRSLAATGTEKSTVESGKLNAVSSGSATPQPAPVPQACSLDD-PDCEAC 960
>gi|260220050|emb|CBA27200.1| Ribonucleoside-diphosphate reductase subunit alpha [Curvibacter
putative symbiont of Hydra magnipapillata]
Length = 1306
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 310/816 (37%), Positives = 453/816 (55%), Gaps = 58/816 (7%)
Query: 7 DGKQEAVHFDKITARLKKLSYGLSIE-HCDPVLVSQKVCTGVYKGVTTSQLDELAAETAA 65
+G++ + ++ R++ GL + P+L + +Y GV ++ + A A
Sbjct: 169 NGQRVPLDLAQLQFRIETACSGLGADVKAAPILA--ETMRNLYDGVPLDEVYKAAILAAR 226
Query: 66 AMTTNHPDYASLAARIVVSNLHKNT------KKSFSETIKDMYNHYNERSGLKAPLIADD 119
+ PDY AR++ + + + E D + + +R G+ A L+ +
Sbjct: 227 TLIEKDPDYTYATARLLFHTISREVLGRDVAQADMQEAYADYFPGFIKR-GIAAELLDEK 285
Query: 120 VYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIH 179
+ +K RL S + RD +DY G +TL Y L +E PQ MRVA+G+
Sbjct: 286 LQQFDLK---RLGSALKAGRDLQFDYLGLQTLYDRYFLHEGKTRIELPQAFFMRVAMGLS 342
Query: 180 KDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLK 236
++ID AI+ Y ++S F ++PTLFN+GT R+QLSSC+L + DD ++GIY+++K
Sbjct: 343 LNEIDREARAIEFYEVLSSFDFMSSTPTLFNSGTLRSQLSSCYLTTVPDD-LDGIYESIK 401
Query: 237 ECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGA 296
E A++SK AGG+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG KRKGA
Sbjct: 402 ENALLSKFAGGLGNDWTRVRALGSHIKGTNGESQGVVPFLKVVNDTAVAVNQGG-KRKGA 460
Query: 297 FAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEA 356
YLE WH DI EFL+LRKN G + R D+ A W+PDLFM RV G W+LF P+
Sbjct: 461 VCTYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMRRVMEKGTWTLFSPSNV 520
Query: 357 PGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTC 411
P L D +G EFE+ Y YE+ E K + VQA +LW ++L ETG P++ FKD C
Sbjct: 521 PDLHDLFGAEFEKAYVAYEEKAARGEIKPSRTVQASDLWRKMLTMLFETGHPWITFKDAC 580
Query: 412 NKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVG 471
N +S QQ+ G + SSNLCTE+ TS TETAVCNL S+ L +++
Sbjct: 581 NVRSPQQHAGVVHSSNLCTEITLNTSDTETAVCNLGSVNLLQHL---------------- 624
Query: 472 SRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTF 531
K+ D KL L+ +ID+NYY V+ AR SN+RHRP+G+G+ D+
Sbjct: 625 ----KDGALDHNKLKRTISTAMRMLDNVIDINYYAVKKARDSNMRHRPVGLGLMAFQDSL 680
Query: 532 ILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWG 591
L +P+ S A + E I Y+A S+++A G Y +Y GS KG+L PD
Sbjct: 681 YELRIPYASDAAVEFADQSMEAISYYAYWASTDLARERGKYHSYKGSLWDKGVLPPDTLD 740
Query: 592 -----------VNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYT 640
V+ S DW LR+ I+ +G+RNS VA PTA+ S I+G + EP
Sbjct: 741 MLANARGGYVEVDRSSTLDWNALRNKIAADGMRNSNCVAIAPTATISNIIGVDASIEPCF 800
Query: 641 SNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYK 700
N+ + LSGEF V+N +L+ DL +GLW ++ + + DGS+ I ++P+E+K +Y
Sbjct: 801 GNLSVKSNLSGEFTVINSYLVRDLKRLGLWDDVMVMDLKHFDGSLSPIDRVPQEIKQLYA 860
Query: 701 TVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRS 760
T +E++ + LV+ A R +ID +QSLNI+M + KL + AWLRGLKT YYLR+
Sbjct: 861 TAFEVETRWLVEAAARRQKWIDQAQSLNIYMAGASGKKLDETYKLAWLRGLKT-TYYLRT 919
Query: 761 RAAADAIKFTVDTSVLKENPKVTDDDDAKMAQMVCS 796
+A A K TV L V+ +DA+ + + S
Sbjct: 920 MSATHAEKSTVTAGRLN---AVSSGNDAQGSTKMSS 952
>gi|113869189|ref|YP_727678.1| ribonucleotide-diphosphate reductase subunit alpha [Ralstonia
eutropha H16]
gi|113527965|emb|CAJ94310.1| Ribonucleoside-diphosphate reductase alpha subunit [Ralstonia
eutropha H16]
Length = 977
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 309/768 (40%), Positives = 434/768 (56%), Gaps = 49/768 (6%)
Query: 34 CDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKN---- 89
+P+L ++ +Y GV +Q+ + A A + PDY+ + ARI++ + K
Sbjct: 187 AEPIL--KETLKNLYDGVPMTQVYDSAILAARTLIEKDPDYSQVTARILLHTIRKEILGT 244
Query: 90 --TKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFG 147
T+ S + + + R G++A L+ + + + ARL + + RDF ++Y G
Sbjct: 245 EVTQAEMSTRYAEYFPKFIAR-GIEAELLDEQLATF---DLARLGAALDAGRDFQFNYLG 300
Query: 148 FKTLERSYLLKVQGKVVERPQHMLMRVAVGI---HKDDIDSAIKTYHMMSQRWFTHASPT 204
+TL Y L + +E PQ MRVA+G+ KD AI+ Y ++S F ++PT
Sbjct: 301 LQTLYDRYFLHIDETRIEMPQAFFMRVAMGLALNEKDREARAIEFYQLLSSFDFMSSTPT 360
Query: 205 LFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRG 264
LFN+GT R+QLSSC+L + DD +EGIY+ LKE A++SK AGG+G N+RA GS+I+G
Sbjct: 361 LFNSGTRRSQLSSCYLTTVSDD-LEGIYEALKENALLSKFAGGLGNDWTNVRALGSHIKG 419
Query: 265 TNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHR 324
TNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R
Sbjct: 420 TNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRR 478
Query: 325 ARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EGK 379
D+ A W+PDLFM+RV G W+LF P P L D G EFE+ Y YE E K
Sbjct: 479 THDMNTANWIPDLFMKRVMEGGEWTLFSPATCPDLHDKVGKEFEKAYLGYEAKAASGELK 538
Query: 380 AKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPT 439
K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ T+ +
Sbjct: 539 LFKKLPALQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTNES 598
Query: 440 ETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKI 499
E AVCNL S+ L +H +K + D KL + L+ +
Sbjct: 599 EIAVCNLGSVNLV-----------AHMAK----QADGTYALDHAKLQKTVRTAMRMLDNV 643
Query: 500 IDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHAL 559
ID+NYY V+ AR SNLRHRP+G+G+ G D +L P+ S A + E + Y+A
Sbjct: 644 IDINYYAVDKARNSNLRHRPVGMGIMGFQDCLHVLRTPYSSDAAVKFADTSMEAVCYYAY 703
Query: 560 RTSSEIAAREGPYETYHGSPVSKGILQPD-----------MWGVNPSDRWDWGGLRDMIS 608
S+E+A G Y +Y GS +GIL D V+ S DW LR I
Sbjct: 704 HASTELAEERGRYSSYEGSLWDRGILPQDSLKLLAEERGGYLDVDMSATMDWDALRARIK 763
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMG 668
++G+RNS +A PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL E G
Sbjct: 764 QHGMRNSNCIAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTVVNDYLVRDLKERG 823
Query: 669 LWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLN 728
LW ++ + Y DGS+ +I +IP++L+ IY T +E++ LV+ A R +ID +QSLN
Sbjct: 824 LWDEVMVADLKYFDGSLSRIDRIPQDLRDIYATAFEVEPTWLVEAASRRQKWIDQAQSLN 883
Query: 729 IHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
I+M + KL + AW+RGLKT YYLR+ AA K TV L
Sbjct: 884 IYMAGASGKKLDDTYKLAWVRGLKT-TYYLRTMAATHVEKSTVSRGSL 930
>gi|383760081|ref|YP_005439067.1| ribonucleoside-diphosphate reductase, alpha subunit NrdA
[Rubrivivax gelatinosus IL144]
gi|381380751|dbj|BAL97568.1| ribonucleoside-diphosphate reductase, alpha subunit NrdA
[Rubrivivax gelatinosus IL144]
Length = 951
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 317/839 (37%), Positives = 468/839 (55%), Gaps = 65/839 (7%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIE-HCDPVLVSQKVCTGVYKGVTTSQLDEL 59
++VV R G++ + + + + +++ GL + +P+L + +Y GV ++ +
Sbjct: 144 LHVVDR-GQRVPLDLEGLRSLVEQACAGLGDDVRAEPILAETR--RNLYDGVPLDEVYKA 200
Query: 60 AAETAAAMTTNHPDYASLAARIVVSNLHKNTKKS--FSETIKDMYNHYNE---RSGLKAP 114
+ A + P Y AR+++ + + + E + Y Y R G++A
Sbjct: 201 SILAARTLIEKDPAYTRATARLLLHTIRREILGADVRPEAMAARYAEYFPEYVRQGVQAE 260
Query: 115 LIADDV--YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLM 172
L+ +++ +D++ RL + + +RD +DY G +TL Y L V G+ +E PQ M
Sbjct: 261 LLDEELQRFDLV-----RLGAALKPERDLQFDYLGLQTLYDRYFLHVDGRRIELPQAFFM 315
Query: 173 RVAVGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIE 229
RVA+G+ ++ID AI+ Y ++S F ++PTLFN+GT R+QLSSC+L + DD +E
Sbjct: 316 RVAMGLALNEIDREARAIEFYDVLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTVADD-LE 374
Query: 230 GIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQG 289
GIY+ LKE A++SK AGG+G +RA GS+I+GTNG S G+VP L+V NDTA V+QG
Sbjct: 375 GIYEALKENALLSKFAGGLGNDWTPVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQG 434
Query: 290 GGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWS 349
G KRKGA YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV G W+
Sbjct: 435 G-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGGDWT 493
Query: 350 LFCPNEAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQIETGTPY 404
LF P+ P L D +G FE Y YE+ E + K + A++LW ++L ETG P+
Sbjct: 494 LFSPSSCPDLHDKFGAAFEDAYVAYERKADQGEMRPFKRLPAKDLWRKMLTMLFETGHPW 553
Query: 405 MLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMES 464
+ FKD CN +S QQ++G + SSNLCTE+ TS +E AVCNL SI L ++V G+
Sbjct: 554 ITFKDACNLRSPQQHVGVVHSSNLCTEITLNTSASEIAVCNLGSINLAQHVAGGGI---- 609
Query: 465 HPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGV 524
D KL L+ +ID+NYY V+ AR +NLRHRP+G+G+
Sbjct: 610 ----------------DQAKLKRTVSTAMRMLDNVIDINYYAVKKARDANLRHRPVGLGL 653
Query: 525 QGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGI 584
G D L +P+ S A + E + YHA SSE+A G Y +Y GS +G+
Sbjct: 654 MGFQDCLYQLRLPYASEAAVEFADRSMEALCYHAYWASSELAEERGRYSSYRGSLWDRGV 713
Query: 585 LQPDMWG-----------VNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNN 633
L D V+ S+ DW LR I+ +G+RNS VA PTA+ S I+G +
Sbjct: 714 LPQDTLDLLAAARGGHVEVDRSETLDWAALRARIAAHGMRNSNCVAIAPTATISNIIGVD 773
Query: 634 ECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPE 693
EP N+ + LSGEF VVN++L+ DL +GLW ++ + + DGS++ I ++P+
Sbjct: 774 ASIEPCFGNLSVKSNLSGEFTVVNEYLVRDLKRLGLWDDVMVMDLKHFDGSLRAIDRVPD 833
Query: 694 ELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKT 753
ELK +Y T +E+ + LV+ A R +ID +QSLNI+M + KL ++ AW RGLKT
Sbjct: 834 ELKQLYATAFEVDARWLVEAAARRQKWIDQAQSLNIYMAGASGKKLDEIYKLAWTRGLKT 893
Query: 754 GMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAKMAQM------VCSLTNREECMAC 806
YYLR+ +A A K TV + P+ D + A CS+ N +C AC
Sbjct: 894 -TYYLRTMSATHAEKSTVAPGAMNAVPQHGGLDASAAAAEPASDVRFCSIDN-PDCEAC 950
>gi|395763949|ref|ZP_10444618.1| ribonucleotide-diphosphate reductase subunit alpha
[Janthinobacterium lividum PAMC 25724]
Length = 984
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 309/771 (40%), Positives = 436/771 (56%), Gaps = 54/771 (7%)
Query: 32 EHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTK 91
+H D + + +Y GV +L + A A A+ P Y+ + ARI+ LH K
Sbjct: 181 KHVDADAILAETVKNLYDGVPVEELHKSAILAARALMEKDPAYSQVTARIL---LHTVRK 237
Query: 92 KSFSETIKDM-----YNHYNERSGLKAPLIADDVYDIIMK--NAARLDSEIIYDRDFDYD 144
+ F + + Y Y + K IA+D+ + ++ + RL I+ DRD +
Sbjct: 238 EVFGKEVPQSAAAAEYLTYFPQYIAKG--IANDLLNPVLASFDLERLAKAIVADRDLQFG 295
Query: 145 YFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHA 201
Y G +TL Y L + +E PQ MRVA+G+ ++ D AI+ Y ++S F +
Sbjct: 296 YIGLQTLYDRYFLHIHDVRIEMPQAFYMRVAMGLALNEADREARAIEFYSLLSSFDFMSS 355
Query: 202 SPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSY 261
+PTLFN+GT R+QLSSC+L + DD +EGIYD +K+ A+++K AGG+G +RA G++
Sbjct: 356 TPTLFNSGTLRSQLSSCYLSTVSDD-LEGIYDAIKDNALLAKYAGGLGNDWTPVRALGAH 414
Query: 262 IRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKE 321
I+GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFLDLRKN G +
Sbjct: 415 IKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHMDIEEFLDLRKNTGDD 473
Query: 322 EHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAK 381
R D+ + W+PD+FM+RV G W+LF P+E P L D G FE+ Y YE + A
Sbjct: 474 RRRTHDMNTSNWIPDMFMKRVMEKGEWTLFSPSETPDLHDLVGKAFEKAYLGYEAKAAAG 533
Query: 382 KV-----VQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYT 436
++ +QA +LW ++L ETG P++ FKD CN +S Q ++G + SSNLCTE+ T
Sbjct: 534 EIRSFKKIQALDLWRKMLSMLFETGHPWITFKDPCNIRSPQSHVGVVHSSNLCTEITLNT 593
Query: 437 SPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENL 496
P E AVCNL S+ +P +++E KL D KLA+ L
Sbjct: 594 GPDEIAVCNLGSVNMPAHMKE---------GKL-----------DHVKLAKTIRTAMRML 633
Query: 497 NKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYY 556
+ +ID+NYY VE AR SN+RHRP+G+GV G D ++ +PF S A ET+ Y
Sbjct: 634 DNVIDINYYAVEKARNSNMRHRPVGMGVMGFQDCLHMMRIPFASDAAVSFADTSMETVCY 693
Query: 557 HALRTSSEIAAREGPYETYHGSPVSKGILQPD-----------MWGVNPSDRWDWGGLRD 605
+A S+E+A G YE+Y GS +GIL D V+ S DW +R+
Sbjct: 694 YAYLASTELAEERGRYESYAGSLWDRGILPQDSVKLLAEERGGYLEVDSSSAMDWTPVRE 753
Query: 606 MISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLT 665
I+K G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF +N +L+ DL
Sbjct: 754 RIAKFGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLYVKSNLSGEFTEINGYLVRDLK 813
Query: 666 EMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQ 725
LW ++ + + Y DGS+ KI +IP++L+ IY T +E+ LV+ A R +ID +Q
Sbjct: 814 ARDLWDEVMISDLKYFDGSLVKIDRIPQDLRDIYATAFEVSPSWLVEAASRRQKWIDQAQ 873
Query: 726 SLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
SLNI+M + KL + AWLRGLKT YYLR+ AA K T T L
Sbjct: 874 SLNIYMAGASGKKLDETYKLAWLRGLKT-TYYLRTIAATHMEKSTSKTGAL 923
>gi|399018405|ref|ZP_10720584.1| ribonucleoside-diphosphate reductase, alpha subunit [Herbaspirillum
sp. CF444]
gi|398101521|gb|EJL91737.1| ribonucleoside-diphosphate reductase, alpha subunit [Herbaspirillum
sp. CF444]
Length = 989
Score = 539 bits (1388), Expect = e-150, Method: Compositional matrix adjust.
Identities = 309/800 (38%), Positives = 447/800 (55%), Gaps = 57/800 (7%)
Query: 4 VKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAET 63
V DG+ + ++ + GL +H D + + +Y GV +L + A
Sbjct: 160 VVEDGQSRLLDLGEVRTLITAACVGLE-KHVDADAILAETVKNLYDGVPVEELHKSAILA 218
Query: 64 AAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIK--DMYNHYNE------RSGLKAPL 115
A A+ P Y+ + AR++ +H K+ F + + D Y E + G++A L
Sbjct: 219 ARALMEKDPAYSQVTARLL---MHTIRKEVFGKEVAQADAPAEYLEYFAKYIKKGIEAEL 275
Query: 116 IADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVA 175
+ + +K +L I +RD + Y G +TL Y L +QG +E PQ MRVA
Sbjct: 276 LDSKLAQFDLK---KLAEAIKPERDLQFGYLGLQTLYDRYFLHIQGTRIEMPQAFYMRVA 332
Query: 176 VGIHKDDIDSAIKT---YHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIY 232
+G+ ++ID +T Y+++S F ++PTLFN+GT R+QLSSC+L + DD ++GIY
Sbjct: 333 MGLSLNEIDREARTIEFYNLLSSFDFMSSTPTLFNSGTLRSQLSSCYLTTVADD-LDGIY 391
Query: 233 DTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGK 292
+ +KE A+++K AGG+G +R+ G++I+GTNG S G+VP L+V NDTA V+QGG K
Sbjct: 392 EAIKENALLAKYAGGLGNDWTPVRSLGAHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-K 450
Query: 293 RKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFC 352
RKGA YLE WH DI EFLDLRKN G + R D+ A W+PDLFM+RV G W+LF
Sbjct: 451 RKGAVCAYLETWHMDIEEFLDLRKNTGDDRRRTHDMNTANWIPDLFMKRVMEKGEWTLFS 510
Query: 353 PNEAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQIETGTPYMLF 407
P++AP L D +G FE YT YE E K K VQA +LW ++L ETG P++ F
Sbjct: 511 PSDAPDLHDKFGKAFEEAYTGYEAKAARGELKLFKKVQALDLWRKMLSMLFETGHPWITF 570
Query: 408 KDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPS 467
KD CN +S QQ++G + SSNLCTE+ T+ +E AVCNL S+ +P ++
Sbjct: 571 KDPCNIRSPQQHVGVVHSSNLCTEITLNTNESEIAVCNLGSVNMPAHL------------ 618
Query: 468 KLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
N D KL + L+ +ID+NYY V+ AR SNLRHRP+G+G+ G
Sbjct: 619 --------VNGEIDHAKLQKTIRTAMRMLDNVIDINYYAVKKARDSNLRHRPVGLGIMGF 670
Query: 528 ADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQP 587
D + +P+ S +A + E + Y+A S+E+A G Y +Y GS +GIL
Sbjct: 671 QDCLHMKRVPYASMDAVEFADRSMEAVCYYAYWASTELAEERGRYSSYRGSLWDRGILPQ 730
Query: 588 DMWGVNPSDR-----------WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
D + +R DW LR IS+ G+RNS VA PTA+ S I+G + C
Sbjct: 731 DSLKLLAQERGGYLEADMSETLDWPALRSRISEFGMRNSNCVAIAPTATISNIIGVSACI 790
Query: 637 EPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELK 696
EP N+Y + LSGEF +N++L+ DL GLW ++ + + Y DGS+ KI +IP++L+
Sbjct: 791 EPTYQNLYVKSNLSGEFTEINEYLVRDLKARGLWDEVMISDLKYFDGSLAKIDRIPQDLR 850
Query: 697 AIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMY 756
IY T +E++ LV+ A R +ID +QSLNI+M + +L + AWLRGLKT Y
Sbjct: 851 DIYATAFEVEPSWLVEAASRRQKWIDQAQSLNIYMAGASGKRLDETYKLAWLRGLKT-TY 909
Query: 757 YLRSRAAADAIKFTVDTSVL 776
YLR+ A K T T L
Sbjct: 910 YLRTIGATHTEKSTSKTGAL 929
>gi|83746811|ref|ZP_00943859.1| Ribonucleoside-diphosphate reductase alpha chain [Ralstonia
solanacearum UW551]
gi|207744362|ref|YP_002260754.1| ribonucleoside reductase 1 (large chain) (partial sequence n
terminus) protein [Ralstonia solanacearum IPO1609]
gi|83726580|gb|EAP73710.1| Ribonucleoside-diphosphate reductase alpha chain [Ralstonia
solanacearum UW551]
gi|206595767|emb|CAQ62694.1| ribonucleoside reductase 1 (large chain) (partial sequence n
terminus) protein [Ralstonia solanacearum IPO1609]
Length = 987
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 305/767 (39%), Positives = 436/767 (56%), Gaps = 47/767 (6%)
Query: 35 DPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKN----- 89
DP + ++ +Y+GV SQ+ + A A + P Y+ ARI++ + +
Sbjct: 183 DPEPILKETVKNLYEGVPMSQVYDSAILAARTLIEKDPAYSQATARILLHTIRREILGEE 242
Query: 90 -TKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGF 148
T+ + D + + +R G+ A L+ D + + A+L + + RD ++Y G
Sbjct: 243 VTQAEMAARYVDYFPQFIKR-GINAGLLDDTLAQF---DLAKLGAALDASRDLQFNYLGL 298
Query: 149 KTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASPTL 205
+TL Y L + K +E PQ MRVA+G+ ++ID AI+ YH++S F ++PTL
Sbjct: 299 QTLYDRYFLHISDKRIEMPQAFFMRVAMGLSLNEIDREARAIEFYHLLSSFDFMSSTPTL 358
Query: 206 FNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGT 265
FN+GT R+QLSSC+L + DD ++GIY+ LKE A++SK AGG+G N+RA GS+I+GT
Sbjct: 359 FNSGTCRSQLSSCYLTTVSDD-LDGIYEALKENALLSKFAGGLGNDWTNVRALGSHIKGT 417
Query: 266 NGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRA 325
NG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R
Sbjct: 418 NGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRT 476
Query: 326 RDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EGKA 380
D+ A W+PDLFM+RV NG W+LF P+ P L D G FE+ Y YE+ E
Sbjct: 477 HDMNTANWIPDLFMKRVMENGEWTLFSPSTCPDLHDKVGRAFEQAYLGYEEKVARGEITL 536
Query: 381 KKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTE 440
K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ T+ +E
Sbjct: 537 FKKMPAMQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTNDSE 596
Query: 441 TAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKII 500
AVCNL S+ L ++ + + + D +KL + I L+ +I
Sbjct: 597 IAVCNLGSVNLVAHLVQ---------------QADGSYALDHDKLKKTVRIAMRMLDNVI 641
Query: 501 DVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALR 560
D+NYY V+ AR SNLRHRP+G+GV G D +L +P+ + A Q E + Y+A
Sbjct: 642 DINYYAVKKARDSNLRHRPVGLGVMGFQDALHVLRIPYANEAAVQFADTSMEAVCYYAYW 701
Query: 561 TSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDR-----------WDWGGLRDMISK 609
S+E+A G Y TY GS +GIL D + +R DW LR I +
Sbjct: 702 ASTELAEERGRYSTYKGSLWDRGILPQDSLKLLAQERGGYLEADLSSTMDWDSLRGRIQQ 761
Query: 610 NGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGL 669
G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL GL
Sbjct: 762 YGMRNSNCVAIAPTATISNIIGVSACIEPTYQNLYVKSNLSGEFTVVNDYLVRDLKARGL 821
Query: 670 WSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNI 729
W ++ + Y DGS+ +I +IP++L+ +Y T +E++ + LV+ A R +ID +QSLNI
Sbjct: 822 WDEVMVADLKYFDGSLARIDRIPQDLRDLYATAFEVEPQWLVEAASRRQKWIDQAQSLNI 881
Query: 730 HMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
+M + L + AWLRGLKT YYLR+ A K TV L
Sbjct: 882 YMAGASGKMLDDTYKLAWLRGLKT-TYYLRTIGATHVEKSTVSRGTL 927
>gi|239813963|ref|YP_002942873.1| ribonucleotide-diphosphate reductase subunit alpha [Variovorax
paradoxus S110]
gi|239800540|gb|ACS17607.1| ribonucleoside-diphosphate reductase, alpha subunit [Variovorax
paradoxus S110]
Length = 971
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 304/753 (40%), Positives = 432/753 (57%), Gaps = 48/753 (6%)
Query: 47 VYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNT--KKSFSETIKDMYNH 104
+Y GV ++ + + A + PDY AR+++ + K ++ Y
Sbjct: 195 LYDGVPLDEVYKASILAARTLIEKDPDYTFATARLLLHTIFKEIIGREVMPAERATAYAD 254
Query: 105 YNERSGLKAPLIADDVYD--IIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGK 162
Y + K + +D+ D ++ + RL + + +RD +DY G +TL Y L V+
Sbjct: 255 YFPQFIKKG--VENDLLDEKLLQYDLPRLGAALKAERDNQFDYLGLQTLYDRYFLHVRKS 312
Query: 163 VVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCF 219
+E PQ MRVA+G+ +ID AI+ Y ++S F ++PTLFNAGT R+QLSSC+
Sbjct: 313 RIELPQAFFMRVAMGLSLGEIDREARAIEFYEVLSSFDFMSSTPTLFNAGTLRSQLSSCY 372
Query: 220 LVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVF 279
L + DD ++GIY+++KE A++SK AGG+G +RA GS+I+GTNG S G+VP L+V
Sbjct: 373 LTTVPDD-LDGIYESIKENALLSKFAGGLGNDWTRVRALGSHIKGTNGESQGVVPFLKVV 431
Query: 280 NDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFM 339
NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R D+ A W+PDLFM
Sbjct: 432 NDTAVAVNQGG-KRKGAVCTYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFM 490
Query: 340 ERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEIL 394
RV G W+LF P+ P L D +G +FE+ Y YE+ E K + +QA +LW ++L
Sbjct: 491 RRVMEKGTWTLFSPSNVPDLHDLFGADFEKAYVAYEEKAARGEIKPARTIQASDLWRKML 550
Query: 395 KSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRY 454
ETG P++ FKD CN +S QQ+ G + SSNLCTE+ TS TETAVCNL S+ L ++
Sbjct: 551 TMLFETGHPWITFKDACNVRSPQQHAGVVHSSNLCTEITLNTSDTETAVCNLGSVNLLQH 610
Query: 455 VREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSN 514
+++ V D EKL L+ +ID+NYY V+ AR SN
Sbjct: 611 LKDGKV--------------------DQEKLKRTISTAMRMLDNVIDINYYAVKKARDSN 650
Query: 515 LRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYET 574
LRHRP+G+G+ G D L +P+ S EA Q + E I YHA S+E+A G Y +
Sbjct: 651 LRHRPVGLGLMGFQDALYELRIPYASQEAVQFADESMEAICYHAYWASTELARERGKYSS 710
Query: 575 YHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRDMISKNGVRNSLLVAPMPT 623
Y GS KGIL D V+ S DW LR I +G+RNS VA PT
Sbjct: 711 YKGSLWDKGILPIDTLDLLEKARGGYVEVDRSATLDWEALRQKIKADGMRNSNCVAIAPT 770
Query: 624 ASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDG 683
A+ S I+G + EP N+ + LSGEF V+N +L+ DL +GLW ++ + + DG
Sbjct: 771 ATISNIIGVDASIEPCFGNLSVKSNLSGEFTVINHYLVRDLKRLGLWDDVMVMDLKHFDG 830
Query: 684 SVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLH 743
S++ I ++P+++KA+Y T +E++ LV+ A R +ID +QSLNI+M + KL +
Sbjct: 831 SLRPIDRVPQDVKALYATAFEVETTWLVEAAARRQKWIDQAQSLNIYMAGASGKKLDDTY 890
Query: 744 FHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
AWLRGLKT YYLR+++A A K TV + L
Sbjct: 891 KLAWLRGLKT-TYYLRTQSATHAEKSTVQSGRL 922
>gi|332530700|ref|ZP_08406631.1| ribonucleotide-diphosphate reductase subunit alpha [Hylemonella
gracilis ATCC 19624]
gi|332039868|gb|EGI76263.1| ribonucleotide-diphosphate reductase subunit alpha [Hylemonella
gracilis ATCC 19624]
Length = 988
Score = 538 bits (1387), Expect = e-150, Method: Compositional matrix adjust.
Identities = 312/793 (39%), Positives = 450/793 (56%), Gaps = 53/793 (6%)
Query: 4 VKRDGKQEAVHFDKITARLKKLSYGLSIE-HCDPVLVSQKVCTGVYKGVTTSQLDELAAE 62
V +G++ A+ +++ ++ LS + DP++ + +Y GV ++ + A
Sbjct: 156 VTDNGQRVALDLNRLQRLIESACANLSADVKADPIVA--ETLRNLYDGVPLEEVYKAAIL 213
Query: 63 TAAAMTTNHPDYASLAARIVVSNLHKNT--KKSFSETIKDMYNHYNE---RSGLKAPLIA 117
A + PDY AR++ + K + +K Y Y + G+ A L+
Sbjct: 214 AARTLIEKDPDYTYATARLLFHTIAKEVLGRDVQPSEMKQAYADYFPGFIKKGVDAELLN 273
Query: 118 DDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVG 177
++ +K RL + + +RD +DY G +TL Y L V+ +E PQ MRVA+G
Sbjct: 274 PELLQYDLK---RLGAALKSERDQQFDYLGLQTLYDRYFLHVKKTRIELPQAFFMRVAMG 330
Query: 178 IHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
+ ++ID AI+ Y ++S F ++PTLFN+GT R+QLSSC+L + DD ++GIY++
Sbjct: 331 LALNEIDREARAIEFYEVLSSFDFMSSTPTLFNSGTLRSQLSSCYLTTVPDD-LDGIYES 389
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+KE A++SK AGG+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG KRK
Sbjct: 390 IKENALLSKFAGGLGNDWTRVRALGSHIKGTNGESQGVVPFLKVVNDTAVAVNQGG-KRK 448
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA YLE WH DI EFL+LRKN G + R D+ A W+PDLFM RV G W+LF P+
Sbjct: 449 GAVCTYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMRRVMEKGEWTLFSPS 508
Query: 355 EAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQIETGTPYMLFKD 409
+AP L D +G+ FE+ Y YE E K K V A +LW ++L ETG P++ FKD
Sbjct: 509 DAPDLHDLFGSAFEKAYVAYEAKAKRGELKPSKTVPAIDLWRKMLSMLFETGHPWITFKD 568
Query: 410 TCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKL 469
CN +S QQ+ G + SSNLCTE+ TS TETAVCNL S+ L +++ + KL
Sbjct: 569 ACNVRSPQQHAGVVHSSNLCTEITLNTSDTETAVCNLGSVNLKQHITD---------GKL 619
Query: 470 VGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
D EKL + L+ +ID+NYY V+ AR SNLRHRP+G+GV D
Sbjct: 620 -----------DHEKLKKTISTAMRMLDNVIDINYYAVKKARDSNLRHRPVGLGVMAFQD 668
Query: 530 TFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDM 589
+ +P+ S A Q + E I Y+A S+E+A G Y +Y GS SKGIL PD
Sbjct: 669 ALYEMRIPYASDAAVQFADESMEAICYYAYWASTELARERGVYSSYQGSLWSKGILPPDT 728
Query: 590 WG-----------VNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
V+ S DW LR I+ +G+RNS VA PTA+ S I+G + EP
Sbjct: 729 LELLARERGGYVEVDRSATLDWELLRKKIAADGMRNSNCVAIAPTATISNIIGVDASIEP 788
Query: 639 YTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAI 698
N+ + LSGEF ++N +L+ DL +GLW ++ + + DGS+ I ++P+++KA+
Sbjct: 789 CFGNLSVKSNLSGEFTIINGYLVKDLKRLGLWDEVMVMDLKHFDGSLLPIDRVPQDIKAL 848
Query: 699 YKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYL 758
Y T +E++ LV+ A R +ID +QSLNI+M + KL + AW RGLKT YYL
Sbjct: 849 YATAFEVEPSWLVEAAARRQKWIDQAQSLNIYMAGASGKKLDDTYKLAWTRGLKT-TYYL 907
Query: 759 RSRAAADAIKFTV 771
R+ +A A K TV
Sbjct: 908 RTTSATQAEKSTV 920
>gi|254516738|ref|ZP_05128797.1| putative ribonucleoside-diphosphate reductase alpha subunit [gamma
proteobacterium NOR5-3]
gi|219675161|gb|EED31528.1| putative ribonucleoside-diphosphate reductase alpha subunit [gamma
proteobacterium NOR5-3]
Length = 967
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 318/836 (38%), Positives = 454/836 (54%), Gaps = 64/836 (7%)
Query: 3 VVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAE 62
VV+ DG + + +++ + + GL E + + +Y GV+ +L
Sbjct: 163 VVQLDGSKAPLDLERLHIIVSEACAGL--EDVSESRILDEALRNLYDGVSMQELSTSLVI 220
Query: 63 TAAAMTTNHPDYASLAARIVVSNLHKNTKKSF----SETIKDMYNHYNE------RSGLK 112
TA + P+Y +AR++ NL S T DM +Y + + G++
Sbjct: 221 TARTLIEQEPNYTYASARLLCDNLRTEALTFLGVAESATQGDMDRYYPQALSAYIKRGVE 280
Query: 113 APLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLM 172
L+ + D ++ +L + I+ +RD + Y G +TL Y + +E PQ M
Sbjct: 281 LELLDPTLADYDLE---QLGAAILPERDLQFTYLGLQTLYDRYFIHSDEVRIELPQIFFM 337
Query: 173 RVAVGI-----HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDS 227
RVA+G+ H++ AI+ Y ++S + ++PTLFNAGT R QLSSC+L + DD
Sbjct: 338 RVAMGLAVEEEHREA--RAIEFYRLLSSFDYMSSTPTLFNAGTLRPQLSSCYLTTVPDD- 394
Query: 228 IEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVD 287
+ GIY +++ A++SK AGG+G +RA GSYI+GTNG S G+VP L+V NDTA V+
Sbjct: 395 LHGIYGAIQDNAMLSKFAGGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVN 454
Query: 288 QGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGL 347
QGG KRKGA YLE WH DI EF++LRKN G + R D+ A W+PDLFM+RV +G
Sbjct: 455 QGG-KRKGAVCSYLETWHMDIEEFVELRKNTGDDRRRTHDMNTANWIPDLFMKRVFDDGD 513
Query: 348 WSLFCPNEAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQIETGT 402
W+LF PN+ P L D +G FE Y YE E K K V+AQNLW ++L ETG
Sbjct: 514 WTLFSPNDVPDLHDLYGKAFEERYNTYEAMAANGEIKNHKTVKAQNLWRKMLGMLFETGH 573
Query: 403 PYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPM 462
P+M FKD CN +S QQ+ G + SSNLCTE+ TS E AVCNL SI LP+++ E G
Sbjct: 574 PWMTFKDPCNLRSPQQHAGVVHSSNLCTEITLNTSADEIAVCNLGSINLPQHIDENG--- 630
Query: 463 ESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGI 522
+ EKL + L+ +ID+NYY V+TAR SN RHRP+G+
Sbjct: 631 -----------------LNLEKLEQTVRTAVRMLDNVIDINYYSVDTARNSNFRHRPVGL 673
Query: 523 GVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSK 582
G+ G D + + S A + E I Y+A+ SS +AA G Y +Y GS S+
Sbjct: 674 GLMGFQDALYKQHIAYGSDAAVEFADRSMEAISYYAIDASSSLAAERGAYSSYEGSLWSQ 733
Query: 583 GILQPDMWG------------VNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQIL 630
GIL D V+ + DW LR + G+RNS ++A PTA+ + I
Sbjct: 734 GILPIDSLSKLVDERGSDYIKVDSTTTLDWESLRTSVKARGMRNSNVMAIAPTATIANIT 793
Query: 631 GNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQ 690
G ++ EP N+Y + LSGEF VVN +L++DL GLW ++ N + Y DGSVQ I +
Sbjct: 794 GVSQSIEPTYQNLYVKSNLSGEFTVVNPYLVNDLKARGLWDSVMVNDLKYYDGSVQSIER 853
Query: 691 IPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRG 750
IP +L+AIY +E++ K +V+ A R +ID +QSLN++++ + KL + AW G
Sbjct: 854 IPADLRAIYSNAFEVEPKWIVECASRRQKWIDQAQSLNLYINNASGKKLDITYRMAWYSG 913
Query: 751 LKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
LKT YYLRS AA K T+ T L + A + Q CSL + +C AC
Sbjct: 914 LKT-TYYLRSLAATGTEKSTIATGQLNAVSSSAEPQPAPVPQ-ACSLDD-PDCEAC 966
>gi|145588392|ref|YP_001154989.1| ribonucleotide-diphosphate reductase subunit alpha
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
gi|145046798|gb|ABP33425.1| ribonucleoside-diphosphate reductase, alpha subunit
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
Length = 993
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 313/813 (38%), Positives = 451/813 (55%), Gaps = 60/813 (7%)
Query: 33 HCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNT-- 90
H D + + +Y GV +Q+ + A + + P ++ + ARI++ + K
Sbjct: 201 HIDATPIITETIKNLYDGVPMAQVYDSAILASRTLIEKDPAFSQVTARILMHVIRKEILG 260
Query: 91 KKSFSETIKDMYNHYNER---SGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFG 147
K+ ++ Y Y + G+ A L+ + + + RL + + RD ++Y G
Sbjct: 261 KEVLQGDMQSEYGTYFAKYINEGISAELLDPRMREF---DLPRLAAALNASRDLQFNYLG 317
Query: 148 FKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASPT 204
+TL Y L ++ + +E PQ MRVA+G+ +++D AI+ Y ++S F ++PT
Sbjct: 318 LQTLYDRYFLHIEDRRIEMPQAFFMRVAMGLSLNELDRERRAIEFYEILSTFDFMSSTPT 377
Query: 205 LFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRG 264
LFN+ T R QLSSC+L ++DD ++GIY+ LKE A++SK AGG+G N+RA GS+I+G
Sbjct: 378 LFNSATTRPQLSSCYLTTVEDD-LDGIYEALKENALLSKFAGGLGNDWTNVRALGSHIKG 436
Query: 265 TNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHR 324
TNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R
Sbjct: 437 TNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRR 495
Query: 325 ARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EGK 379
D+ + W+PDLFM+RV NG W+LF P+ P L D +G FE Y YE+ E K
Sbjct: 496 THDMNTSNWIPDLFMKRVMENGDWTLFSPSNTPDLHDKYGKAFEEAYVAYEQKADRGELK 555
Query: 380 AKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPT 439
+ + AQ LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ T+ T
Sbjct: 556 PFRRIPAQQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHIGVVHSSNLCTEITLNTNET 615
Query: 440 ETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKI 499
E AVCNL S+ L ++ KLV D EKL L+ +
Sbjct: 616 EIAVCNLGSVNLTAHM------TTDANGKLV---------LDHEKLQRTVRTAMRMLDNV 660
Query: 500 IDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHAL 559
ID+NYY V AR SNL+HRP+G+G+ G D + +P+ S EA + E + Y+A
Sbjct: 661 IDINYYAVAKARNSNLKHRPVGMGIMGFQDCLHMQRIPYASEEAVKFADSSMEAVCYYAY 720
Query: 560 RTSSEIAAREGPYETYHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRDMIS 608
+ S+E+A G Y TY GS +GIL D V+ S DW GLR I
Sbjct: 721 QASNELAEERGVYSTYTGSLWDRGILPQDSVALLAQERGGYLEVDNSSTMDWSGLRARIK 780
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMG 668
+ G+RNS VA PTA+ S I+G + C EP N++ + LSGEF VVN++L+ DL + G
Sbjct: 781 QYGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLFVKSNLSGEFTVVNEYLVRDLKDRG 840
Query: 669 LWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLN 728
LW ++ + Y DG++ KI +IP++L+ +Y T +E++ LV+ A R +ID +QSLN
Sbjct: 841 LWDEVMIADLKYFDGTLSKIDRIPQDLRDLYATAFEVEPSWLVEAASRRQKWIDQAQSLN 900
Query: 729 IHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK--ENPKVTDDD 786
I+M + KL + AWLRGLKT YYLR+ AA K TV + L + +
Sbjct: 901 IYMGGASGKKLDDTYKLAWLRGLKT-TYYLRTMAATHVEKSTVASGQLNSVSSGGGVNGT 959
Query: 787 DAKMAQM---------VCSL----TNREECMAC 806
DA A VC++ EEC AC
Sbjct: 960 DATAASAAGGVEADGPVCTMRPGDAGFEECEAC 992
>gi|192291020|ref|YP_001991625.1| ribonucleotide-diphosphate reductase subunit alpha
[Rhodopseudomonas palustris TIE-1]
gi|192284769|gb|ACF01150.1| ribonucleoside-diphosphate reductase, alpha subunit
[Rhodopseudomonas palustris TIE-1]
Length = 974
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 310/798 (38%), Positives = 442/798 (55%), Gaps = 64/798 (8%)
Query: 7 DGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAA 66
DG + ++ A + + GL D VL + +Y G++ +L A
Sbjct: 155 DGTLHLIDMQRLAAIIAEACAGLDGVSVDAVLAETQ--RNLYDGISDDELALAPILAARI 212
Query: 67 MTTNHPDYASLAARIVVSNL------------HKNTKKSFSETIKDMYNHYNERSGLKAP 114
PDYA ++AR+++ L H+ T+ +E D ++ Y ++G+
Sbjct: 213 FVETEPDYAKVSARLLLDKLRREALSFVEGRPHQATQAQMAERYADYFSAY-VKAGIAHE 271
Query: 115 LIADDV--YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLM 172
LI ++ +D+ ++L + I +RD +DY G +TL Y L V G E PQ M
Sbjct: 272 LIDPEIGRFDV-----SKLAAAIKPERDLQFDYLGLQTLYDRYFLHVHGTRFELPQAFFM 326
Query: 173 RVAVGIHKDDID---SAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIE 229
RVA GI ++D AI+ Y ++S F ++PTLFNAGT R QLSSCFL + DD ++
Sbjct: 327 RVACGIALREVDREAKAIEFYDLLSSFDFMASTPTLFNAGTLRPQLSSCFLTTVPDD-LD 385
Query: 230 GIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQG 289
GI+ ++K+ A++SK AGG+G ++R G++I+GTNG S GIVP L+V NDTA V+QG
Sbjct: 386 GIFKSIKDNALLSKYAGGLGNDWTHVRGLGAHIKGTNGESQGIVPFLKVANDTAIAVNQG 445
Query: 290 GGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWS 349
G KRKGA YLE WH DI EFLDLRKN G + R D+ A WVPDLFM+RV+ NG W+
Sbjct: 446 G-KRKGAVCAYLETWHIDIEEFLDLRKNTGDDRRRTHDMNTANWVPDLFMQRVEQNGPWT 504
Query: 350 LFCPNEAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQIETGTPY 404
LF P+E P L D G F Y YE E + K ++A +LW +L ETG P+
Sbjct: 505 LFSPDETPDLHDLTGRAFAERYAFYEARAARGELRVTKQIRAVDLWRRMLTMLFETGHPW 564
Query: 405 MLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMES 464
+ FKD CN +S QQ+ G + SSNLCTE+ TS E AVCNL S+ L +V
Sbjct: 565 ITFKDPCNLRSPQQHCGVVHSSNLCTEITLNTSEREVAVCNLGSVNLVNHV--------- 615
Query: 465 HPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGV 524
V R D +L L+ +IDVN+Y + AR SNLRHRP+G+G+
Sbjct: 616 -----VDGR------LDCARLERTVTTAMRMLDNVIDVNFYTIPEARASNLRHRPVGLGL 664
Query: 525 QGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGI 584
G D +L +P+ S EA + E I Y ++ S ++AA G Y +Y GS S+GI
Sbjct: 665 MGFQDALNILRLPYASDEAVAFADESMEAIAYWSISASVDLAAERGRYASYDGSLWSQGI 724
Query: 585 LQPDMWG-----------VNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNN 633
L D V+ R DW LR ++ G+RNS ++A PTA+ S I G +
Sbjct: 725 LPLDSIDLLDEARGAAIEVDRGSRLDWEALRKRVTATGMRNSNVMAIAPTATISNICGVS 784
Query: 634 ECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPE 693
+ EP N+Y + +SG+F VVN HL+ DL GLW ++ + + Y DGS+ +I ++P+
Sbjct: 785 QSIEPAYQNLYVKSNMSGDFTVVNTHLVRDLKGRGLWDEVMISDLKYFDGSLGQIDRVPD 844
Query: 694 ELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKT 753
+LKA+Y T +EI L++ A R +ID +QSLN+++ P+ L +L+ AW RGLKT
Sbjct: 845 DLKALYATAFEIDATWLIEAAARRQKWIDQAQSLNLYLANPSGKTLDALYRLAWRRGLKT 904
Query: 754 GMYYLRSRAAADAIKFTV 771
YYLRSR+A K T+
Sbjct: 905 -TYYLRSRSATHVEKSTL 921
>gi|110635037|ref|YP_675245.1| ribonucleotide-diphosphate reductase subunit alpha [Chelativorans
sp. BNC1]
gi|110286021|gb|ABG64080.1| ribonucleoside-diphosphate reductase, alpha subunit [Chelativorans
sp. BNC1]
Length = 954
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 309/801 (38%), Positives = 453/801 (56%), Gaps = 59/801 (7%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
+ V+ DG + + ++TA +++ GL + +L + +Y G+T +L
Sbjct: 145 LQVMLEDGSKTPLDIARLTAVVEEACQGLEAVSAEAILSEAQ--RNLYDGITLDELSLAP 202
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKN---------TKKSFSETIKDMYNHYNE---R 108
A + P+Y+ ++AR+++ L + T+ + +E + + Y Y E
Sbjct: 203 ILAARTLVETEPNYSQVSARLLLDKLRREALTFVEGRPTQATQAEMV-ERYPAYFEGFIA 261
Query: 109 SGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQ 168
+G++A +I ++ +K RL + + +RD + Y GF+TL Y L G E PQ
Sbjct: 262 AGIQAEMIDPELGRFDLK---RLGAALKPERDLRFQYLGFQTLYDRYFLHEDGVRYELPQ 318
Query: 169 HMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKD 225
MRVA+G+ +ID AI+ Y ++S F ++PTLFNAGT R QLSSCFL + D
Sbjct: 319 AFFMRVAMGLALREIDREARAIEFYDLISTFDFMCSTPTLFNAGTLRPQLSSCFLTTVSD 378
Query: 226 DSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARY 285
D ++GI+ +K+ A+++K +GG+G +R G+ I+GTNG S GIVP L+V NDTA
Sbjct: 379 D-LDGIFKAVKDNALLAKYSGGLGNDWTPVRGLGARIKGTNGKSQGIVPFLKVANDTAIA 437
Query: 286 VDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSN 345
V+QGG KRKGA YLE WH DI EFLDLRKN G + R D+ A WVPDLFMERV+++
Sbjct: 438 VNQGG-KRKGAVCAYLETWHVDIEEFLDLRKNTGDDRRRTHDMNTANWVPDLFMERVEAD 496
Query: 346 GLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQIET 400
G W+LF P+E P L D +G F+ Y +YE E + + V+A +LW +L ET
Sbjct: 497 GEWTLFSPDETPDLHDLYGPAFKAAYEEYEARAARGEIRVFRQVRAVDLWRRMLTMLFET 556
Query: 401 GTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGV 460
G P++ FKD CN +S Q++ G + SSNLCTE+ TS E AVCNL SI L +V E G+
Sbjct: 557 GHPWITFKDPCNLRSPQRHAGVVHSSNLCTEITLNTSKDEVAVCNLGSINLAAHVSEKGL 616
Query: 461 PMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPI 520
D EKLA L+ +ID+N+Y + ARRSNLRHRP+
Sbjct: 617 --------------------DMEKLARTVATAMRMLDNVIDINFYTIPEARRSNLRHRPV 656
Query: 521 GIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPV 580
G+G+ G D L +P+ S A + E I YHA+ S E+A G Y ++ GS
Sbjct: 657 GLGLMGFQDALQTLRLPYASEGAVEFADRSMEAIAYHAISASVELAKERGAYASFEGSLW 716
Query: 581 SKGILQPDMW-------GVNPSDR---WDWGGLRDMISKNGVRNSLLVAPMPTASTSQIL 630
SKG+L D GV+ DR DW LR + ++G+RNS +A PTA+ S I
Sbjct: 717 SKGVLPIDSLSFVAESRGVDGMDRGTTLDWESLRARVVEHGMRNSNTMAIAPTATISNIC 776
Query: 631 GNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQ 690
G ++ EP N++ + +SG+F VVN L+HDL GLW ++ + + Y DG + +I +
Sbjct: 777 GVSQSIEPAYQNLFVKSNMSGDFTVVNAALVHDLKARGLWDEVMVSDLKYYDGLLGQIDR 836
Query: 691 IPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRG 750
+P++LKA+Y T +EI L++ A R +ID +QSLN+++ P+ KL L+ AW +G
Sbjct: 837 VPDDLKALYATAFEIDPAWLIEAASRRQKWIDQAQSLNLYIANPSGKKLDELYRLAWRKG 896
Query: 751 LKTGMYYLRSRAAADAIKFTV 771
LKT YYLRSR+A K T+
Sbjct: 897 LKT-TYYLRSRSATHVEKSTL 916
>gi|17547524|ref|NP_520926.1| ribonucleotide-diphosphate reductase subunit alpha [Ralstonia
solanacearum GMI1000]
gi|17429828|emb|CAD16512.1| putative ribonucleoside reductase 1 (large chain) oxidoreductase
protein [Ralstonia solanacearum GMI1000]
Length = 987
Score = 538 bits (1385), Expect = e-150, Method: Compositional matrix adjust.
Identities = 304/770 (39%), Positives = 436/770 (56%), Gaps = 47/770 (6%)
Query: 32 EHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKN-- 89
E DP + ++ +Y+GV SQ+ + A A + P Y+ ARI++ + +
Sbjct: 180 ESVDPEPILKETVKNLYEGVPMSQVYDSAILAARTLIEKDPAYSQATARILLHTIRREIL 239
Query: 90 ----TKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDY 145
T+ + D + + +R G+ A L+ D + + A+L + + RD ++Y
Sbjct: 240 GEEVTQAEMAGRYADYFPQFIKR-GINAGLLDDTLAQF---DLAKLGAALDASRDLQFNY 295
Query: 146 FGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHAS 202
G +TL Y L + K +E PQ MRVA+G+ ++ID AI+ Y ++S F ++
Sbjct: 296 LGLQTLYDRYFLHISDKRIEMPQAFFMRVAMGLSLNEIDREARAIEFYQLLSSFDFMSST 355
Query: 203 PTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYI 262
PTLFN+GT R+QLSSC+L + DD ++GIY+ LKE A++SK AGG+G N+RA GS+I
Sbjct: 356 PTLFNSGTCRSQLSSCYLTTVSDD-LDGIYEALKENALLSKFAGGLGNDWTNVRALGSHI 414
Query: 263 RGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEE 322
+GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G +
Sbjct: 415 KGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDR 473
Query: 323 HRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----E 377
R D+ A W+PDLFM+RV G W+LF P+ P L D G FE Y YE E
Sbjct: 474 RRTHDMNTANWIPDLFMKRVMEGGEWTLFSPSTCPDLHDKVGKAFEAAYLGYEDKVARGE 533
Query: 378 GKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTS 437
K K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ T+
Sbjct: 534 IKLFKKMPALQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTN 593
Query: 438 PTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLN 497
+E AVCNL S+ L +V + + + D +KL + L+
Sbjct: 594 DSEIAVCNLGSVNLVAHVVK---------------QADGSYALDHDKLKKTVRTAMRMLD 638
Query: 498 KIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYH 557
+ID+NYY V+ AR SNLRHRP+G+G+ G D +L +P+ + A Q E + Y+
Sbjct: 639 NVIDINYYAVKKARDSNLRHRPVGLGIMGFQDALHVLRIPYATDAAVQFADTSMEAVCYY 698
Query: 558 ALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDR-----------WDWGGLRDM 606
A S+E+A G Y TY GS +G+L D + +R DW GLR+
Sbjct: 699 AYWASTELAEERGRYSTYKGSLWDRGVLPQDSLKLLAQERGGYLEADLSSTMDWDGLRER 758
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
I ++G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL
Sbjct: 759 IQQHGMRNSNCVAIAPTATISNIIGVSACIEPTYQNLYVKSNLSGEFTVVNDYLVRDLKA 818
Query: 667 MGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQS 726
GLW ++ + Y DGS+ +I +IP++L+ +Y T +E++ + LV+ A R +ID +QS
Sbjct: 819 RGLWDEVMVADLKYFDGSLARIDRIPQDLRDLYATAFEVEPQWLVEAASRRQKWIDQAQS 878
Query: 727 LNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
LNI+M + L + AWLRGLKT YYLR+ A K TV L
Sbjct: 879 LNIYMAGASGKMLDDTYKLAWLRGLKT-TYYLRTIGATHVEKSTVSRGTL 927
>gi|387127722|ref|YP_006296327.1| ribonucleotide reductase subunit alpha [Methylophaga sp. JAM1]
gi|386274784|gb|AFI84682.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Methylophaga sp. JAM1]
Length = 955
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 299/800 (37%), Positives = 453/800 (56%), Gaps = 61/800 (7%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
++V DG ++ + D++ + + GL+ D + + ++ GV+ +++
Sbjct: 133 LHVTLNDGTRQPLDIDRLRNLIDEACEGLA--QVDNAAILRDTQRNIFDGVSEKDVEKAL 190
Query: 61 AETAAAMTTNHPDYASLAARIV--------VSNLHKNTKKSFSETIKDMYNHYNE---RS 109
+A P Y++LAAR++ +S ++++ +++ + D Y Y + ++
Sbjct: 191 VMSARTFIEKDPAYSTLAARLLMDSIRREALSFVYQSPRQASQGEMADQYKDYFKTYIKT 250
Query: 110 GLKAPLIADDV--YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERP 167
++ LI ++ YD+ RL S + + DF + Y G +TL Y + G E P
Sbjct: 251 AIENELIDSELSLYDL-----ERLGSALKPENDFSFTYLGLQTLYDRYFIHCDGTRFELP 305
Query: 168 QHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMK 224
Q MRVA+G+ ++ID AI+ Y+++S F ++PTLFNAGT R QLSSC+L +
Sbjct: 306 QAFYMRVAMGLAINEIDREARAIEFYNLLSSFDFMSSTPTLFNAGTLRPQLSSCYLTTVP 365
Query: 225 DDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTAR 284
DD + GIY +++ A++SK AGG+G +R G++I+GTNG S G+VP L+V NDTA
Sbjct: 366 DD-LSGIYSAMRDNALLSKYAGGLGNDWTRVRGLGAHIKGTNGKSQGVVPFLKVANDTAV 424
Query: 285 YVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQS 344
V+QGG KRKGA YLE WH D+ EFLDLRKN G + R D+ A W+PDLFM+RV
Sbjct: 425 AVNQGG-KRKGAVCAYLETWHIDVEEFLDLRKNTGDDRRRTHDMNTANWIPDLFMKRVAE 483
Query: 345 NGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQIE 399
G W+LF P E P L D G FE+ Y +YE+ E + K + A +LW ++L E
Sbjct: 484 EGQWTLFSPEEVPDLHDLTGLGFEKAYAEYEEKAARGEIRNFKTMPATDLWRKMLGMLFE 543
Query: 400 TGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMG 459
TG P++ FKD CN +S QQ++G + SSNLCTE+ TS E AVCNL SI + +++
Sbjct: 544 TGHPWITFKDPCNLRSPQQHIGVVHSSNLCTEITLNTSDQEIAVCNLGSINMVQHI---- 599
Query: 460 VPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRP 519
N D EKL L+ +I+ NYY V AR SNL HRP
Sbjct: 600 ---------------DANGKLDKEKLNRTVKTAMRMLDNVIEYNYYSVPQARHSNLLHRP 644
Query: 520 IGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSP 579
+G+G+ G D L +P+ + EA + + E + Y+A+ SS++AA G Y++Y GS
Sbjct: 645 VGLGIMGFQDALYKLRIPYSTEEAVKFADESMEAVSYYAIDASSDLAAERGKYKSYEGSL 704
Query: 580 VSKGILQPDMWGV-----------NPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQ 628
SKGIL D + + S DW LRD + + G+RNS +A PTA+ S
Sbjct: 705 WSKGILPIDSIKILKEARGEYLQQDESQTMDWDALRDKVKRQGMRNSNTMAIAPTATISN 764
Query: 629 ILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKI 688
I G ++ EP N++ + LSGEF V+N +++ DL + GLW ++ N + Y DGS+Q I
Sbjct: 765 ICGVSQSIEPTYQNLFVKSNLSGEFTVINPYMVEDLKQRGLWDDVMINDLKYYDGSLQAI 824
Query: 689 PQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWL 748
++P ELKA+Y T +E+ + L++ A R ++D +QSLN++M +P+ K+ +L+ AW+
Sbjct: 825 DRVPAELKALYTTAFEMDARWLIEAASRRQKWLDQAQSLNLYMAEPSGKKMDNLYKLAWV 884
Query: 749 RGLKTGMYYLRSRAAADAIK 768
RGLKT YYLRS A A K
Sbjct: 885 RGLKT-TYYLRSMGATGAEK 903
>gi|241664220|ref|YP_002982580.1| ribonucleotide-diphosphate reductase subunit alpha [Ralstonia
pickettii 12D]
gi|240866247|gb|ACS63908.1| ribonucleoside-diphosphate reductase, alpha subunit [Ralstonia
pickettii 12D]
Length = 994
Score = 537 bits (1384), Expect = e-150, Method: Compositional matrix adjust.
Identities = 304/770 (39%), Positives = 436/770 (56%), Gaps = 47/770 (6%)
Query: 32 EHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKN-- 89
+ DP + ++ +Y+GV +Q+ + A + + P Y+ + ARI++ + +
Sbjct: 184 DAVDPEPILKETVKNLYEGVPMTQVYDSAILASRTLIEKDPAYSQVTARILLHTIRREIL 243
Query: 90 ----TKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDY 145
T+ S D + + +R G+ A L+ D + + ARL + + RDF ++Y
Sbjct: 244 GEEVTQAEMSTRYVDYFPQFIKR-GINAELLDDKLAQF---DLARLGAALDASRDFQFNY 299
Query: 146 FGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHAS 202
G +TL Y L + +E PQ MRVA+G+ ++ID AI+ Y ++S F ++
Sbjct: 300 LGLQTLYDRYFLHINETRIEMPQAFFMRVAMGLALNEIDREARAIEFYQLLSSFDFMSST 359
Query: 203 PTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYI 262
PTLFN+GT R+QLSSC+L + DD ++GIY+ LKE A++SK AGG+G N+RA GS+I
Sbjct: 360 PTLFNSGTRRSQLSSCYLTTVSDD-LDGIYEALKENALLSKFAGGLGNDWTNVRALGSHI 418
Query: 263 RGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEE 322
+GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G +
Sbjct: 419 KGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDR 477
Query: 323 HRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----E 377
R D+ A W+PDLFM+RV G W+LF P+ P L D G FE+ Y YE E
Sbjct: 478 RRTHDMNTANWIPDLFMKRVMEGGEWTLFSPSTCPDLHDKVGKAFEQAYLAYEDKVARGE 537
Query: 378 GKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTS 437
K K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ T+
Sbjct: 538 IKLFKKMPALQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTN 597
Query: 438 PTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLN 497
+E AVCNL S+ L ++ + + + D EKL + L+
Sbjct: 598 DSEIAVCNLGSVNLVAHLVK---------------QADGSVVLDHEKLKKTVRTAMRMLD 642
Query: 498 KIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYH 557
+ID+NYY V+ AR SNLRHRP+G+G+ G D +L +P+ S A Q E + Y+
Sbjct: 643 NVIDINYYAVKKARDSNLRHRPVGMGIMGFQDALHVLRVPYASEAAVQFADTSMEAVCYY 702
Query: 558 ALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDR-----------WDWGGLRDM 606
A S+E+A G Y +Y GS +GIL D + +R DW LR
Sbjct: 703 AYWASTELAEERGRYSSYKGSLWDRGILPQDSLKLLAEERGGYLEADMSSTMDWDSLRGR 762
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
I + G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL
Sbjct: 763 IKQYGMRNSNCVAIAPTATISNIIGVSACIEPTYQNLYVKSNLSGEFTVVNDYLVRDLKA 822
Query: 667 MGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQS 726
GLW ++ + Y DGS+ +I +IP++L+ +Y T +E++ + LV+ A R +ID +QS
Sbjct: 823 RGLWDEVMVADLKYFDGSLARIDRIPQDLRDLYATAFEVEPQWLVEAASRRQKWIDQAQS 882
Query: 727 LNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
LNI+M + KL + AWLRGLKT YYLR+ A K TV L
Sbjct: 883 LNIYMAGASGKKLDDTYKLAWLRGLKT-TYYLRTIGATHVEKSTVSRGTL 931
>gi|332286775|ref|YP_004418686.1| ribonucleotide-diphosphate reductase subunit alpha [Pusillimonas
sp. T7-7]
gi|330430728|gb|AEC22062.1| ribonucleotide-diphosphate reductase subunit alpha [Pusillimonas
sp. T7-7]
Length = 973
Score = 537 bits (1383), Expect = e-150, Method: Compositional matrix adjust.
Identities = 309/772 (40%), Positives = 444/772 (57%), Gaps = 54/772 (6%)
Query: 28 GLSIEH-CDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNL 86
GL++ H D + ++ +Y G+ ++ + A +A AM N P Y+ + AR++ L
Sbjct: 173 GLNLPHNIDAEAILKETVKNIYDGIPVDEVFKSAILSARAMVENDPSYSQVTARLL---L 229
Query: 87 HKNTKKSFSETIK--DMYNHYNE------RSGLKAPLIADDVYDI-IMKNAARLDSEIIY 137
H K+ E + DM Y E ++G++ L+ + + + K AA L +E
Sbjct: 230 HTIRKEVLGEEVSQSDMATRYAEYFPQFLKAGIEGGLLDEKLAQFDLPKLAAALKAE--- 286
Query: 138 DRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDI---DSAIKTYHMMS 194
RD ++Y G +TL Y L ++G+ +E PQ MRVA+G+ ++I + AI+ Y ++S
Sbjct: 287 -RDLQFNYLGLQTLYDRYFLHLRGRRIELPQVFFMRVAMGLALNEINREERAIEFYEILS 345
Query: 195 QRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHN 254
F ++PTLFN+GT +QLSSC+L + DD + GIYD +KE A+++K AGG+G
Sbjct: 346 SFDFMSSTPTLFNSGTLHSQLSSCYLTTVSDD-LAGIYDAIKENALLAKYAGGLGNDWTP 404
Query: 255 IRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDL 314
+RA S+I+GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+L
Sbjct: 405 VRALRSHIKGTNGESQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLEL 463
Query: 315 RKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKY 374
RKN G E R D+ A W+PDLFM+RV NG W+LF P++AP L D +G +FE Y Y
Sbjct: 464 RKNTGDERRRTHDMNTANWIPDLFMKRVMENGEWTLFSPSDAPDLHDKYGKDFEEAYLGY 523
Query: 375 EK-----EGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLC 429
E E K V A LW ++L ETG P++ FKD CN +S QQ++G + SSNLC
Sbjct: 524 EDKVARGELPLFKKVPANMLWRKMLSMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLC 583
Query: 430 TEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVT 489
TE+ T+ +E AVCNL S+ L ++++ + D EKL
Sbjct: 584 TEITLNTNDSEIAVCNLGSVNLAAHLKQ---------------DANGQYVLDHEKLERTI 628
Query: 490 GIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKD 549
GI L+ +ID+NYY V AR SN+RHRP+G+GV G D ++ +PF S +A + +
Sbjct: 629 GIAMRMLDNVIDINYYAVPKARNSNVRHRPVGMGVMGFQDCLHMMRVPFASDDAVEFSDR 688
Query: 550 IFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWG-----------VNPSDRW 598
E Y+A SS++AA G Y ++ GS +GIL D V+ S
Sbjct: 689 SMEAACYYAYWASSKLAAERGHYASFKGSLWDRGILPQDTLALLREERGGYVEVDDSSTL 748
Query: 599 DWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNK 658
DW LR I ++G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN
Sbjct: 749 DWDSLRAHIKQHGMRNSNCVAIAPTATISNIIGVSPCIEPNYRNLYVKSNLSGEFTVVND 808
Query: 659 HLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRG 718
+L+ DL E LW ++ + + Y DGS+ +I +IP +L+ +Y T +E+ +V+ A R
Sbjct: 809 YLVRDLKERKLWDEVMVSDLKYFDGSLARIDRIPADLRKLYATAFEVDPTWVVECAARRS 868
Query: 719 CYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFT 770
+ID +QSLNI M + KL ++ AW+RGLKT YYLRS A +A K T
Sbjct: 869 KWIDQAQSLNIFMAGVSGKKLDDIYKLAWVRGLKT-TYYLRSIGATNAEKST 919
>gi|299065647|emb|CBJ36819.1| Ribonucleoside-diphosphate reductase, alpha subunit [Ralstonia
solanacearum CMR15]
Length = 987
Score = 537 bits (1383), Expect = e-150, Method: Compositional matrix adjust.
Identities = 303/770 (39%), Positives = 437/770 (56%), Gaps = 47/770 (6%)
Query: 32 EHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKN-- 89
E DP + ++ +Y+GV SQ+ + A A + P Y+ ARI++ + +
Sbjct: 180 ESVDPEPILKETVKNLYEGVPMSQVYDSAILAARTLIEKDPAYSQATARILLHTIRREIL 239
Query: 90 ----TKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDY 145
T+ + D + + +R G+ A L+ D + + A+L + + RD ++Y
Sbjct: 240 GEEVTQAEMAGRYADYFPQFIKR-GINAGLLDDKLAQF---DLAKLGAALDASRDLQFNY 295
Query: 146 FGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHAS 202
G +TL Y L + K +E PQ MRVA+G+ ++ID A++ Y ++S F ++
Sbjct: 296 LGLQTLYDRYFLHISEKRIEMPQAFFMRVAMGLSLNEIDREARAVEFYQLLSSFDFMSST 355
Query: 203 PTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYI 262
PTLFN+GT R+QLSSC+L + DD ++GIY+ LKE A++SK AGG+G N+RA GS+I
Sbjct: 356 PTLFNSGTCRSQLSSCYLTTVSDD-LDGIYEALKENALLSKFAGGLGNDWTNVRALGSHI 414
Query: 263 RGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEE 322
+GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G +
Sbjct: 415 KGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDR 473
Query: 323 HRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----E 377
R D+ A W+PDLFM+RV G W+LF P+ P L D G FE Y YE+ E
Sbjct: 474 RRTHDMNTANWIPDLFMKRVMEGGEWTLFSPSTCPDLHDKVGRAFEAAYLGYEEKVARGE 533
Query: 378 GKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTS 437
K K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ T+
Sbjct: 534 IKLFKKMPAMQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTN 593
Query: 438 PTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLN 497
+E AVCNL S+ L +V + + + D +KL + L+
Sbjct: 594 DSEIAVCNLGSVNLVAHVVK---------------QADGSYALDHDKLKKTVRTAMRMLD 638
Query: 498 KIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYH 557
+ID+NYY V+ AR SNLRHRP+G+G+ G D+ +L +P+ + A Q E + Y+
Sbjct: 639 NVIDINYYAVKKARDSNLRHRPVGLGIMGFQDSLHVLRIPYATDAAVQFADTSMEAVCYY 698
Query: 558 ALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDR-----------WDWGGLRDM 606
A S+E+A G Y TY GS +G+L D + +R DW GLR
Sbjct: 699 AYWASTELAEERGRYSTYKGSLWDRGVLPQDSLKLLAQERGGYLEADLSSTMDWDGLRAR 758
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
I ++G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL
Sbjct: 759 IQQHGMRNSNCVAIAPTATISNIIGVSACIEPTYQNLYVKSNLSGEFTVVNDYLVRDLKA 818
Query: 667 MGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQS 726
GLW ++ + Y DGS+ +I +IP++L+ +Y T +E++ + LV+ A R +ID +QS
Sbjct: 819 RGLWDEVMVADLKYFDGSLARIDRIPQDLRDLYATAFEVEPQWLVEAASRRQKWIDQAQS 878
Query: 727 LNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
LNI+M + L + AWLRGLKT YYLR+ A K TV L
Sbjct: 879 LNIYMAGASGKMLDDTYKLAWLRGLKT-TYYLRTIGATHVEKSTVSRGTL 927
>gi|340783272|ref|YP_004749879.1| ribonucleotide reductase of class Ia (aerobic) subunit alpha
[Acidithiobacillus caldus SM-1]
gi|340557423|gb|AEK59177.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Acidithiobacillus caldus SM-1]
Length = 945
Score = 537 bits (1383), Expect = e-149, Method: Compositional matrix adjust.
Identities = 312/803 (38%), Positives = 448/803 (55%), Gaps = 45/803 (5%)
Query: 7 DGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAA 66
DG ++ + +++ + + GL E + Q +Y G++ ++L +
Sbjct: 142 DGSEQPLDLERLRQVIGEACSGLG-EAVSVDAILQATQRNLYDGISEAELFQAPILACRV 200
Query: 67 MTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNE------RSGLKAPLIADDV 120
+ P YA AR+++ + + T +M Y E R+G++ L+ +
Sbjct: 201 LIEQDPAYAHATARLLLDRVRREVLGE-PATHAEMAQRYPEYFKDYLRTGIQHELLDPRL 259
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+ R+ + + +RD D+ Y G + L Y L V+ + +E PQ MRVA+G+
Sbjct: 260 AQFDLD---RIAAALRPERDLDFQYLGLQILYDRYFLHVRERRIELPQAFWMRVAMGLAL 316
Query: 181 DDID---SAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKE 237
++ID AI Y ++S+ F ++PTLFNAGT R QLSSCFL + DD ++GIY+ +K+
Sbjct: 317 EEIDREEQAIAFYEVLSRFEFVSSTPTLFNAGTLRPQLSSCFLTTVADD-LDGIYEAIKD 375
Query: 238 CAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAF 297
A++SK +GG+G +RA GSYI+GTNG S G+VP L+V NDTA V+QGG KRKGA
Sbjct: 376 NALLSKYSGGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAV 434
Query: 298 AVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAP 357
YLE WH DI EFL+LRKN G + R D+ A W+PDLFMERV++NG W+LF PNE
Sbjct: 435 CAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMERVEANGQWTLFSPNEVA 494
Query: 358 GLADCWGTEFERLYTKYEKEGKAKKV-----VQAQNLWFEILKSQIETGTPYMLFKDTCN 412
L D G F+ Y YE+ A ++ + A LW ++L ETG P++ FKD CN
Sbjct: 495 DLHDLTGQAFKERYEHYERLADAGEITLFKRLPALQLWRKMLTMLFETGHPWITFKDPCN 554
Query: 413 KKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVRE----MGVPMESHPSK 468
+S QQ++G + SSNLCTE+ TS E AVCNL S+ L ++R G+ E+ +
Sbjct: 555 LRSPQQHVGVVHSSNLCTEITLNTSDKEIAVCNLGSVNLVAHLRAGLPGQGLRTEASADE 614
Query: 469 LVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLA 528
L+ D +KLA + L+ +ID+NYY V AR SNLRHRP+G+G+ G +
Sbjct: 615 LLA-------LVDTDKLARTVRVAMRMLDNVIDMNYYAVAKARNSNLRHRPVGLGLMGFS 667
Query: 529 DTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPD 588
D + L +P+ S A + E I YHA+ S+++A G Y ++ GS S+GIL D
Sbjct: 668 DALLALRIPYASQAAVEFADISQELISYHAIDASADLARERGSYRSFPGSLWSQGILPLD 727
Query: 589 MW-----------GVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFE 637
V+ S R DW LR + K G+RNS +A PTA+ S I+G ++ E
Sbjct: 728 SIELLARSRVAGVDVDRSQRLDWESLRTKV-KGGMRNSNCLAIAPTATISNIVGVSQGIE 786
Query: 638 PYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKA 697
P N+Y + LSGEF VVN +L+ DL LW ++ N + Y DGSV I +IPE LK
Sbjct: 787 PIYQNLYVKSNLSGEFTVVNAYLVRDLKAADLWDEVMVNDLKYFDGSVVPIDRIPEALKP 846
Query: 698 IYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYY 757
+Y +EI + LV+ A R ++D SQSLN++ QP+ K+ + AW RGLKT YY
Sbjct: 847 LYANAFEIDPQWLVEAAARRQKWLDQSQSLNLYFGQPSGKKIDETYRLAWRRGLKT-TYY 905
Query: 758 LRSRAAADAIKFTVDTSVLKENP 780
LRS A A K TV VL P
Sbjct: 906 LRSLGATAAEKSTVSKGVLNAVP 928
>gi|300690380|ref|YP_003751375.1| ribonucleoside-diphosphate reductase subunit alpha [Ralstonia
solanacearum PSI07]
gi|299077440|emb|CBJ50066.1| Ribonucleoside-diphosphate reductase, alpha subunit [Ralstonia
solanacearum PSI07]
gi|344169190|emb|CCA81513.1| ribonucleoside-diphosphate reductase, alpha subunit [blood disease
bacterium R229]
Length = 987
Score = 537 bits (1383), Expect = e-149, Method: Compositional matrix adjust.
Identities = 304/770 (39%), Positives = 437/770 (56%), Gaps = 47/770 (6%)
Query: 32 EHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKN-- 89
E DP + ++ +Y+GV SQ+ + A A + P Y+ + ARI++ + +
Sbjct: 180 EAVDPEPILKETVKNLYEGVPMSQVYDSAILAARTLIEKDPAYSQVTARILLHTIRREIL 239
Query: 90 ----TKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDY 145
T+ + D + + +R G+ A L+ + + + A+L + + RD ++Y
Sbjct: 240 GEEVTQAEMAARYADYFPQFIKR-GINAGLLDEKLAQF---DLAKLGAALDASRDLQFNY 295
Query: 146 FGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHAS 202
G +TL Y L + K +E PQ MRVA+G+ ++ID AI+ Y ++S F ++
Sbjct: 296 LGLQTLFDRYFLHISEKRIEMPQAFFMRVAMGLSLNEIDRESRAIEFYQLLSSFDFMSST 355
Query: 203 PTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYI 262
PTLFN+GT R+QLSSC+L + DD ++GIY+ LKE A++SK AGG+G N+RA GS+I
Sbjct: 356 PTLFNSGTCRSQLSSCYLTTVSDD-LDGIYEALKENALLSKFAGGLGNDWTNVRALGSHI 414
Query: 263 RGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEE 322
+GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G +
Sbjct: 415 KGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDR 473
Query: 323 HRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----E 377
R D+ A W+PDLFM+RV NG W+LF P+ P L D G FE Y YE+ E
Sbjct: 474 RRTHDMNTANWIPDLFMKRVMENGEWTLFSPSTCPDLHDKVGKAFETAYLGYEEKVARGE 533
Query: 378 GKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTS 437
K K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ T+
Sbjct: 534 IKLFKKMPAMQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTN 593
Query: 438 PTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLN 497
+E AVCNL S+ L ++ ++ + D +KL + L+
Sbjct: 594 DSEIAVCNLGSVNLVAHLV---------------TQADGSVALDHDKLKKTVRTAMRMLD 638
Query: 498 KIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYH 557
+ID+NYY V+ AR SNLRHRP+G+G+ G D +L +P+ S A Q + E + Y+
Sbjct: 639 NVIDINYYAVKKARDSNLRHRPVGLGIMGFQDALHVLRIPYASDAAVQFADNSMEAVCYY 698
Query: 558 ALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDR-----------WDWGGLRDM 606
A S+E+A G Y TY GS +GIL D + +R DW LR
Sbjct: 699 AYWASTELAEERGRYSTYKGSLWDRGILPQDSLKLLAQERGGYLEADLSSSMDWDSLRAR 758
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
I + G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL
Sbjct: 759 IQQYGMRNSNCVAIAPTATISNIIGVSACIEPTYQNLYVKSNLSGEFTVVNDYLVRDLKA 818
Query: 667 MGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQS 726
GLW ++ + Y DGS+ +I +IP++L+ +Y T +E++ + LV+ A R +ID +QS
Sbjct: 819 RGLWDEVMVADLKYFDGSLARIDRIPQDLRDLYATAFEVEPQWLVEAASRRQKWIDQAQS 878
Query: 727 LNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
LNI+M + L + AWLRGLKT YYLR+ A K TV L
Sbjct: 879 LNIYMAGASGKMLDDTYKLAWLRGLKT-TYYLRTIGATHVEKSTVSRGTL 927
>gi|171463020|ref|YP_001797133.1| ribonucleotide-diphosphate reductase subunit alpha
[Polynucleobacter necessarius subsp. necessarius STIR1]
gi|171192558|gb|ACB43519.1| ribonucleoside-diphosphate reductase, alpha subunit
[Polynucleobacter necessarius subsp. necessarius STIR1]
Length = 990
Score = 537 bits (1383), Expect = e-149, Method: Compositional matrix adjust.
Identities = 310/810 (38%), Positives = 448/810 (55%), Gaps = 57/810 (7%)
Query: 33 HCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNT-- 90
H D + + +Y GV +Q+ + A + + P Y+ + ARI++ +HK
Sbjct: 201 HIDASPIVTETIKNLYDGVPMAQVYDSAILASRTLIEKDPAYSQVTARILMHVIHKEILG 260
Query: 91 KKSFSETIKDMYNHYNER---SGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFG 147
K+ ++ Y+ Y + G+ A L+ + + + RL + + RD ++Y G
Sbjct: 261 KEVLQGDMQAEYSTYFAKYINEGISAELLDPRMREF---DLPRLAAALNASRDLQFNYLG 317
Query: 148 FKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASPT 204
+TL Y L ++ + +E PQ MRVA+G+ +++D AI+ Y ++S F ++PT
Sbjct: 318 LQTLYDRYFLHIEDRRIEMPQAFFMRVAMGLSLNELDRERRAIEFYEILSTFDFMSSTPT 377
Query: 205 LFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRG 264
LFN+ T R QLSSC+L ++DD ++GIY+ LKE A++SK AGG+G N+RA GS+I+G
Sbjct: 378 LFNSATTRPQLSSCYLTTVEDD-LDGIYEALKENALLSKFAGGLGNDWTNVRALGSHIKG 436
Query: 265 TNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHR 324
TNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R
Sbjct: 437 TNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRR 495
Query: 325 ARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EGK 379
D+ + W+PDLFM+RV NG W+LF P+ P L +G FE Y YE+ E K
Sbjct: 496 THDMSTSNWIPDLFMKRVMENGEWTLFSPSNTPDLHGKFGKAFEEAYVAYEQKADRGELK 555
Query: 380 AKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPT 439
+ + AQ LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ T+
Sbjct: 556 PFRRIPAQQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHIGVVHSSNLCTEITLNTNED 615
Query: 440 ETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKI 499
E AVCNL S+ L ++ + + D EKL L+ +
Sbjct: 616 EIAVCNLGSVNLTAHMT---------------TDANGKMILDHEKLQRTVRTAMRMLDNV 660
Query: 500 IDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHAL 559
ID+NYY V AR SNL+HRP+G+G+ G D + +P+ S EA + E + Y+A
Sbjct: 661 IDINYYAVAKARNSNLKHRPVGMGIMGFQDCLHMQRIPYASDEAVKFADSSMEAVCYYAY 720
Query: 560 RTSSEIAAREGPYETYHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRDMIS 608
+ S+E+A G Y TY GS +GIL D V+ S DW GLR I
Sbjct: 721 QASNELAEERGVYSTYKGSLWDRGILPQDSVALLAAERGGYLEVDSSSTMDWNGLRARIK 780
Query: 609 KNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMG 668
+ G+RNS VA PTA+ S I+G + C EP N++ + LSGEF VVN++L+ DL + G
Sbjct: 781 QYGMRNSNCVAIAPTATISNIIGVSACIEPTFQNLFVKSNLSGEFTVVNEYLVRDLKDRG 840
Query: 669 LWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLN 728
LW ++ + Y DG++ KI +IP++L+ +Y T +E+ LV+ A R +ID +QSLN
Sbjct: 841 LWDEVMIADLKYFDGTLSKIDRIPQDLRDLYATAFEVDPTWLVEAASRRQKWIDQAQSLN 900
Query: 729 IHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK---ENPKVTDD 785
I+M + KL + AWLRGLKT YYLR+ AA K TV + L V
Sbjct: 901 IYMAGASGKKLDDTYKLAWLRGLKT-TYYLRTMAATHVEKSTVASGQLNAVSSGGGVNGT 959
Query: 786 DDAKMAQM-----VCSL----TNREECMAC 806
D A + VC++ EEC AC
Sbjct: 960 DAAAAGGVEADGPVCTMRPGDAGFEECEAC 989
>gi|319791702|ref|YP_004153342.1| ribonucleoside-diphosphate reductase subunit alpha [Variovorax
paradoxus EPS]
gi|315594165|gb|ADU35231.1| ribonucleoside-diphosphate reductase, alpha subunit [Variovorax
paradoxus EPS]
Length = 971
Score = 536 bits (1382), Expect = e-149, Method: Compositional matrix adjust.
Identities = 304/753 (40%), Positives = 432/753 (57%), Gaps = 48/753 (6%)
Query: 47 VYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNT--KKSFSETIKDMYNH 104
+Y GV ++ + + A + PDY AR+++ + K ++ Y
Sbjct: 195 LYDGVPLDEVYKASILAARTLIEKDPDYTFATARLLLHTIFKEIIGREVMPVDRATAYAD 254
Query: 105 YNERSGLKAPLIADDVYD--IIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGK 162
Y + K + +D+ D ++ + RL + + +RD +DY G +TL Y L V+
Sbjct: 255 YFPQFIKKG--VENDLLDEKLLQYDLPRLGAALKAERDNQFDYLGLQTLYDRYFLHVRKT 312
Query: 163 VVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCF 219
+E PQ MRVA+G+ +ID AI+ Y ++S F ++PTLFNAGT R+QLSSC+
Sbjct: 313 RIELPQAFFMRVAMGLSLGEIDREARAIEFYEVLSSFDFMSSTPTLFNAGTLRSQLSSCY 372
Query: 220 LVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVF 279
L + DD ++GIY+++KE A++SK AGG+G +RA GS+I+GTNG S G+VP L+V
Sbjct: 373 LTTVPDD-LDGIYESIKENALLSKFAGGLGNDWTRVRALGSHIKGTNGESQGVVPFLKVV 431
Query: 280 NDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFM 339
NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R D+ A W+PDLFM
Sbjct: 432 NDTAVAVNQGG-KRKGAVCTYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFM 490
Query: 340 ERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEIL 394
RV G W+LF P+ P L D +G +FE+ Y YE+ E K + +QA +LW ++L
Sbjct: 491 RRVMEKGTWTLFSPSNVPDLHDLFGADFEKAYVAYEEKAARGEIKPARTIQASDLWRKML 550
Query: 395 KSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRY 454
ETG P++ FKD CN +S QQ+ G + SSNLCTE+ TS TETAVCNL S+ L ++
Sbjct: 551 TMLFETGHPWITFKDACNVRSPQQHAGVVHSSNLCTEITLNTSDTETAVCNLGSVNLLQH 610
Query: 455 VREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSN 514
+++ V D EKL L+ +ID+NYY V+ AR SN
Sbjct: 611 LKDGKV--------------------DQEKLKRTISTAMRMLDNVIDINYYAVKKARDSN 650
Query: 515 LRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYET 574
LRHRP+G+G+ G D L +P+ S EA Q + E I YHA S+E+A G Y +
Sbjct: 651 LRHRPVGLGLMGFQDALYELRIPYASQEAVQFADESMEAICYHAYWASTELAKERGKYSS 710
Query: 575 YHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRDMISKNGVRNSLLVAPMPT 623
Y GS KGIL D V+ S DW LR I +G+RNS VA PT
Sbjct: 711 YKGSLWDKGILPIDTLDLLEQARGGYVEVDRSATLDWDALRAKIKADGMRNSNCVAIAPT 770
Query: 624 ASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDG 683
A+ S I+G + EP N+ + LSGEF V+N +L+ DL +GLW ++ + + DG
Sbjct: 771 ATISNIIGVDASIEPCFGNLSVKSNLSGEFTVINHYLVRDLKRLGLWDDVMVMDLKHFDG 830
Query: 684 SVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLH 743
S++ I ++P+++KA+Y T +E++ LV+ A R +ID +QSLNI+M + KL +
Sbjct: 831 SLRPIDRVPQDVKALYATAFEVETTWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDDTY 890
Query: 744 FHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
AWLRGLKT YYLR+++A A K TV + L
Sbjct: 891 KLAWLRGLKT-TYYLRTQSATHAEKSTVQSGRL 922
>gi|255019899|ref|ZP_05291974.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Acidithiobacillus caldus ATCC 51756]
gi|254970679|gb|EET28166.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Acidithiobacillus caldus ATCC 51756]
Length = 945
Score = 536 bits (1382), Expect = e-149, Method: Compositional matrix adjust.
Identities = 312/803 (38%), Positives = 447/803 (55%), Gaps = 45/803 (5%)
Query: 7 DGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAA 66
DG ++ + +++ + + GL E + Q +Y G++ +L +
Sbjct: 142 DGSEQPLDLERLRQVIGEACSGLG-EAVSVDAILQATQRNLYDGISEEELFQAPILACRV 200
Query: 67 MTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNE------RSGLKAPLIADDV 120
+ P YA AR+++ + + T +M Y E R+G++ L+ +
Sbjct: 201 LIEQDPAYAHATARLLLDRVRREVLGE-PATHAEMAQRYPEYFKDYLRTGIQHELLDPRL 259
Query: 121 YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHK 180
+ R+ + + +RD D+ Y G + L Y L V+ + +E PQ MRVA+G+
Sbjct: 260 AQFDLD---RIAAALRPERDLDFQYLGLQILYDRYFLHVRERRIELPQAFWMRVAMGLAL 316
Query: 181 DDID---SAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKE 237
++ID AI Y ++S+ F ++PTLFNAGT R QLSSCFL + DD ++GIY+ +K+
Sbjct: 317 EEIDREEQAIAFYEVLSRFEFVSSTPTLFNAGTLRPQLSSCFLTTVADD-LDGIYEAIKD 375
Query: 238 CAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAF 297
A++SK +GG+G +RA GSYI+GTNG S G+VP L+V NDTA V+QGG KRKGA
Sbjct: 376 NALLSKYSGGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAV 434
Query: 298 AVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAP 357
YLE WH DI EFL+LRKN G + R D+ A W+PDLFMERV++NG W+LF PNE
Sbjct: 435 CAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMERVEANGQWTLFSPNEVA 494
Query: 358 GLADCWGTEFERLYTKYEKEGKAKKV-----VQAQNLWFEILKSQIETGTPYMLFKDTCN 412
L D G F+ Y YE+ A ++ + A LW ++L ETG P++ FKD CN
Sbjct: 495 DLHDLTGQAFKERYEHYERLADAGEITLFKRLPALQLWRKMLTMLFETGHPWITFKDPCN 554
Query: 413 KKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVRE----MGVPMESHPSK 468
+S QQ++G + SSNLCTE+ TS E AVCNL S+ L ++R G+ E+ +
Sbjct: 555 LRSPQQHVGVVHSSNLCTEITLNTSDKEIAVCNLGSVNLVAHLRAGLPGQGLRTEASADE 614
Query: 469 LVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLA 528
L+ D +KLA + L+ +ID+NYY V AR SNLRHRP+G+G+ G +
Sbjct: 615 LLA-------LVDTDKLARTVRVAMRMLDNVIDMNYYAVAKARNSNLRHRPVGLGLMGFS 667
Query: 529 DTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPD 588
D + L +P+ S A + E I YHA+ S+++A G Y ++ GS S+GIL D
Sbjct: 668 DALLALRIPYASQAAVEFADISQELISYHAIDASADLARERGSYRSFPGSLWSQGILPLD 727
Query: 589 MW-----------GVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFE 637
V+ S R DW LR + K G+RNS +A PTA+ S I+G ++ E
Sbjct: 728 SIELLARSRVAGVDVDRSQRLDWESLRTKV-KGGMRNSNCLAIAPTATISNIVGVSQGIE 786
Query: 638 PYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKA 697
P N+Y + LSGEF VVN +L+ DL LW ++ N + Y DGSV I +IPE LK
Sbjct: 787 PIYQNLYVKSNLSGEFTVVNAYLVRDLKAADLWDEVMVNDLKYFDGSVVPIDRIPEALKP 846
Query: 698 IYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYY 757
+Y +EI + LV+ A R ++D SQSLN++ QP+ K+ + AW RGLKT YY
Sbjct: 847 LYANAFEIDPQWLVEAAARRQKWLDQSQSLNLYFGQPSGKKIDETYRLAWRRGLKT-TYY 905
Query: 758 LRSRAAADAIKFTVDTSVLKENP 780
LRS A A K TV VL P
Sbjct: 906 LRSLGATAAEKSTVSKGVLNAVP 928
>gi|187930115|ref|YP_001900602.1| ribonucleotide-diphosphate reductase subunit alpha [Ralstonia
pickettii 12J]
gi|187727005|gb|ACD28170.1| ribonucleoside-diphosphate reductase, alpha subunit [Ralstonia
pickettii 12J]
Length = 994
Score = 536 bits (1382), Expect = e-149, Method: Compositional matrix adjust.
Identities = 305/770 (39%), Positives = 435/770 (56%), Gaps = 47/770 (6%)
Query: 32 EHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKN-- 89
E DP + ++ +Y+GV +Q+ + A + + P Y+ + ARI++ + +
Sbjct: 184 EAVDPEPILKETVKNLYEGVPMTQVYDSAILASRTLIEKDPAYSQVTARILLHTIRREIL 243
Query: 90 ----TKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDY 145
T+ S D + + +R G+ A L+ D + + ARL + + RDF ++Y
Sbjct: 244 GEEVTQAEMSTRYVDYFPQFIKR-GINAELLDDKLAQF---DLARLGAALDASRDFQFNY 299
Query: 146 FGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHAS 202
G +TL Y L + +E PQ MRVA+G+ ++ID AI+ Y ++S F ++
Sbjct: 300 LGLQTLYDRYFLHISETRIEMPQAFFMRVAMGLALNEIDREARAIEFYQLLSSFDFMSST 359
Query: 203 PTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYI 262
PTLFN+GT R+QLSSC+L + DD ++GIY+ LKE A++SK AGG+G N+RA GS+I
Sbjct: 360 PTLFNSGTRRSQLSSCYLTTVSDD-LDGIYEALKENALLSKFAGGLGNDWTNVRALGSHI 418
Query: 263 RGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEE 322
+GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G +
Sbjct: 419 KGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDR 477
Query: 323 HRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----E 377
R D+ A W+PDLFM+RV G W+LF P+ P L D G FE+ Y YE E
Sbjct: 478 RRTHDMNTANWIPDLFMKRVMEGGEWTLFSPSTCPDLHDKVGKAFEQAYLAYEDKVARGE 537
Query: 378 GKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTS 437
K K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ T+
Sbjct: 538 IKLFKKMPALQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTN 597
Query: 438 PTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLN 497
+E AVCNL S+ L ++ + + + D EKL + L+
Sbjct: 598 DSEIAVCNLGSVNLVAHLVK---------------QADGSVVLDHEKLKKTVRTAMRMLD 642
Query: 498 KIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYH 557
+ID+NYY V+ AR SNLRHRP+G+G+ G D +L +P+ S A Q E + Y+
Sbjct: 643 NVIDINYYAVKKARDSNLRHRPVGMGIMGFQDALHVLRVPYASDAAVQFADTSMEAVCYY 702
Query: 558 ALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDR-----------WDWGGLRDM 606
A S+E+A G Y +Y GS +GIL D + +R DW LR
Sbjct: 703 AYWASTELAEERGRYSSYKGSLWDRGILPQDSLKLLAEERGGYLEADMSSTMDWDSLRGR 762
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
I + G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL
Sbjct: 763 IKQYGMRNSNCVAIAPTATISNIIGVSACIEPTYQNLYVKSNLSGEFTVVNDYLVRDLKA 822
Query: 667 MGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQS 726
GLW ++ + Y DGS+ +I +IP++L+ +Y T +E++ LV+ A R +ID +QS
Sbjct: 823 RGLWDEVMVADLKYFDGSLARIDRIPQDLRDLYATAFEVEPLWLVEAASRRQKWIDQAQS 882
Query: 727 LNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
LNI+M + KL + AWLRGLKT YYLR+ A K TV L
Sbjct: 883 LNIYMAGASGKKLDDTYKLAWLRGLKT-TYYLRTIGATHVEKSTVSRGTL 931
>gi|332526549|ref|ZP_08402661.1| ribonucleotide-diphosphate reductase subunit alpha [Rubrivivax
benzoatilyticus JA2]
gi|332110817|gb|EGJ10994.1| ribonucleotide-diphosphate reductase subunit alpha [Rubrivivax
benzoatilyticus JA2]
Length = 950
Score = 536 bits (1382), Expect = e-149, Method: Compositional matrix adjust.
Identities = 306/799 (38%), Positives = 450/799 (56%), Gaps = 53/799 (6%)
Query: 8 GKQEAVHFDKITARLKKLSYGLSIE-HCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAA 66
G++ + D + + +++ GL + +P+L + +Y GV ++ + A +
Sbjct: 150 GQRLPLDLDALRSLVEQACAGLGEDVRAEPILAETR--RNLYDGVPLDEVYKAAILASRT 207
Query: 67 MTTNHPDYASLAARIVVSNLHKNTKKS--FSETIKDMYNHYNE---RSGLKAPLIADDVY 121
+ P Y AR+++ + + + E + Y Y R G++A L+ +++
Sbjct: 208 LIEKDPAYTRATARLLLHTIRREILGADVRPEAMAARYAEYFPAYVRQGVQAELLDEELQ 267
Query: 122 DIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKD 181
+ ARL + + +RD +DY G +TL Y L V G+ +E PQ MRVA+G+ +
Sbjct: 268 RF---DLARLGAALKPERDLQFDYLGLQTLYDRYFLHVDGRRIELPQAFFMRVAMGLALN 324
Query: 182 DIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKEC 238
+ID AI+ Y ++S F ++PTLFN+GT R+QLSSC+L + DD +EGIY+ LKE
Sbjct: 325 EIDREARAIEFYDVLSSFDFMSSTPTLFNSGTRRSQLSSCYLTTVSDD-LEGIYEALKEN 383
Query: 239 AIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA 298
A++SK AGG+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG KRKGA
Sbjct: 384 ALLSKFAGGLGNDWTPVRALGSHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVC 442
Query: 299 VYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPG 358
YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV G W+LF P+ P
Sbjct: 443 AYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEGGDWTLFSPSSCPD 502
Query: 359 LADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNK 413
L D +G FE+ Y YE+ E + K + A++LW ++L ETG P++ FKD CN
Sbjct: 503 LHDKFGAAFEQAYVAYERKADRGEIRPFKRLPARDLWRKMLTMLFETGHPWITFKDACNL 562
Query: 414 KSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSR 473
+S QQ++G + SSNLCTE+ TS E AVCNL SI L ++V G+
Sbjct: 563 RSPQQHVGVVHSSNLCTEITLNTSAGEIAVCNLGSINLAQHVAGGGI------------- 609
Query: 474 GSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFIL 533
D KL L+ +ID+NYY V+ AR +NLRHRP+G+G+ G D
Sbjct: 610 -------DQAKLKRTVSTAMRMLDNVIDINYYAVKKARDANLRHRPVGLGLMGFQDCLYQ 662
Query: 534 LGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWG-- 591
L +P+ S A + E + YHA SSE+A G Y +Y GS +G+L D
Sbjct: 663 LRLPYASDAAVEFADRSMEALCYHAYWASSELAEERGRYSSYRGSLWDRGVLPQDTLDLL 722
Query: 592 ---------VNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSN 642
V+ S+ DW LR I+ +G+RNS VA PTA+ S I+G + EP N
Sbjct: 723 AAERGGHVEVDRSETLDWAALRARIAVHGMRNSNCVAIAPTATISNIIGVDASIEPCFGN 782
Query: 643 IYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTV 702
+ + LSGEF VVN++L+ DL +GLW ++ + + DGS++ + ++P+ELK +Y T
Sbjct: 783 LSVKSNLSGEFTVVNEYLVRDLKRLGLWDDVMVMDLKHFDGSLRAVDRVPDELKQLYATA 842
Query: 703 WEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRA 762
+E+ + LV+ A R +ID +QSLNI+M + KL ++ AW RGLKT YYLR+ +
Sbjct: 843 FEVDARWLVEAAARRQKWIDQAQSLNIYMAGASGKKLDEIYKLAWTRGLKT-TYYLRTMS 901
Query: 763 AADAIKFTVDTSVLKENPK 781
A A K TV + P+
Sbjct: 902 ATHAEKSTVAPGAMNAVPR 920
>gi|82703583|ref|YP_413149.1| ribonucleotide-diphosphate reductase subunit alpha [Nitrosospira
multiformis ATCC 25196]
gi|82411648|gb|ABB75757.1| Ribonucleoside-diphosphate reductase [Nitrosospira multiformis ATCC
25196]
Length = 956
Score = 536 bits (1381), Expect = e-149, Method: Compositional matrix adjust.
Identities = 307/804 (38%), Positives = 450/804 (55%), Gaps = 56/804 (6%)
Query: 4 VKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAET 63
V DG++ + ++ A + GL E DP L+ + +Y GV ++ + +
Sbjct: 150 VLEDGRRVPLDTARLLALIGSCCEGLG-EGVDPALILKATLKDLYDGVPMEEVRKSVILS 208
Query: 64 AAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETI--KDMYNHYNE------RSGLKAPL 115
A A+ P Y+ + AR++ LH + E I ++M Y E + G++A L
Sbjct: 209 ARALLEKEPAYSYVTARLL---LHSLRFEVLGEEIVQREMAGRYMEYFPAFIKRGIEAEL 265
Query: 116 IADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVA 175
+ + + + RL + +RD + Y G +TL Y L +Q + +E PQ MRVA
Sbjct: 266 LDERLAQF---DLPRLAQALHAERDLKFGYLGLQTLYDRYFLHIQERRIELPQAFFMRVA 322
Query: 176 VGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIY 232
+G+ ++ID AI+ YH++S F ++PTLFN+GT R+QLSSC+L + DD ++GIY
Sbjct: 323 MGLALNEIDREARAIEFYHVLSNFDFMSSTPTLFNSGTRRSQLSSCYLTTVPDD-LDGIY 381
Query: 233 DTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGK 292
+ +KE A+++K AGG+G +RA GS+I+GTNG S G+VP L+V +DTA V+QGG K
Sbjct: 382 EGIKENALLAKYAGGLGNDWTRVRAMGSHIKGTNGKSQGVVPFLKVVSDTAVAVNQGG-K 440
Query: 293 RKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFC 352
RKGA YLE WH DI EFL+LRKN G + R D+ A WVPDLFM+RV G W+LF
Sbjct: 441 RKGAVCAYLESWHLDIEEFLELRKNTGDDRRRTHDMNTATWVPDLFMKRVMEGGEWTLFS 500
Query: 353 PNEAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQIETGTPYMLF 407
P++ P L + +G FE+ Y YE E K + A LW ++L ETG P++ F
Sbjct: 501 PSDVPDLHEKYGKAFEQAYLAYEDKVARGELDLYKTIPAVQLWRKMLSMLFETGHPWITF 560
Query: 408 KDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPS 467
KD CN +S Q ++G + SSNLCTE+ T+ E AVCNL SI L ++ + G
Sbjct: 561 KDACNIRSPQNHIGVVHSSNLCTEITLNTNDQEIAVCNLGSINLAAHIDDGG-------- 612
Query: 468 KLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
D +KL + L+ +ID+N+Y V AR SNLRHRP+G+G+ G
Sbjct: 613 -----------KLDADKLKRTVSLAMRMLDNVIDINFYAVAKARNSNLRHRPVGLGIMGF 661
Query: 528 ADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGIL-- 585
D + +P+ S EA + E + YHA S+E+A G Y +Y GS +GIL
Sbjct: 662 QDCLHRMRIPYASDEAVEFADRTMEAMAYHAYWASTELAEERGRYASYRGSLWDRGILPQ 721
Query: 586 ------QPDMWGVNPSDR---WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
Q + G +DR DW LR+ I +G+RNS +A PTA+ S I+G +
Sbjct: 722 DTLDLLQEERGGYIEADRSSTLDWEALRERIRNHGMRNSNCLAIAPTATISNIVGVSASI 781
Query: 637 EPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELK 696
EP N+Y + LSGEF + N++L+ DL ++GLW ++ + I Y DG++ KI ++P EL+
Sbjct: 782 EPTFKNLYVKSNLSGEFTIANQYLVSDLKKLGLWDEVMISDIKYFDGALGKIDRVPTELR 841
Query: 697 AIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMY 756
+Y T +E++ + L++ A R +ID SQSLNI++ + KL + AW+RGLKT Y
Sbjct: 842 KLYATAFEVEPQWLIEAAARRQKWIDQSQSLNIYIASVSGKKLDETYKLAWVRGLKT-TY 900
Query: 757 YLRSRAAADAIKFTVDTSVLKENP 780
YLRS A A K TV L P
Sbjct: 901 YLRSLGATSAEKSTVQAGSLNAVP 924
>gi|300703001|ref|YP_003744603.1| ribonucleoside-diphosphate reductase subunit alpha [Ralstonia
solanacearum CFBP2957]
gi|299070664|emb|CBJ41959.1| Ribonucleoside-diphosphate reductase, alpha subunit [Ralstonia
solanacearum CFBP2957]
Length = 987
Score = 536 bits (1381), Expect = e-149, Method: Compositional matrix adjust.
Identities = 304/767 (39%), Positives = 435/767 (56%), Gaps = 47/767 (6%)
Query: 35 DPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKN----- 89
DP + ++ +Y+GV SQ+ + A A + P Y+ ARI++ + +
Sbjct: 183 DPEPILKETVKNLYEGVPMSQVYDSAILAARTLIEKDPAYSQATARILLHTIRREILGEE 242
Query: 90 -TKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGF 148
T+ + D + + +R G+ A L+ D + + A+L + + RD ++Y G
Sbjct: 243 VTQAEMAARYVDYFPQFIKR-GINAGLLDDTLAQF---DLAKLGAALDASRDLQFNYLGL 298
Query: 149 KTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASPTL 205
+TL Y L + K +E PQ MRVA+G+ ++ID AI+ Y ++S F ++PTL
Sbjct: 299 QTLYDRYFLHISDKRIEMPQAFFMRVAMGLSLNEIDREARAIEFYQLLSSFDFMSSTPTL 358
Query: 206 FNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGT 265
FN+GT R+QLSSC+L + DD ++GIY+ LKE A++SK AGG+G N+RA GS+I+GT
Sbjct: 359 FNSGTCRSQLSSCYLTTVSDD-LDGIYEALKENALLSKFAGGLGNDWTNVRALGSHIKGT 417
Query: 266 NGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRA 325
NG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R
Sbjct: 418 NGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRT 476
Query: 326 RDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EGKA 380
D+ A W+PDLFM+RV NG W+LF P+ P L D G FE+ Y YE+ E K
Sbjct: 477 HDMNTANWIPDLFMKRVMENGEWTLFSPSTCPDLHDKVGRAFEQAYLGYEEKVARGEIKL 536
Query: 381 KKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTE 440
K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ T+ +E
Sbjct: 537 FKKMPAMQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTNDSE 596
Query: 441 TAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKII 500
AVCNL S+ L ++ + + + D +KL + L+ +I
Sbjct: 597 IAVCNLGSVNLVAHLVQ---------------QADGSYALDHDKLKKTVRTAMRMLDNVI 641
Query: 501 DVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALR 560
D+NYY V+ AR SNLRHRP+G+GV G D +L +P+ + A Q E + Y+A
Sbjct: 642 DINYYAVKKARDSNLRHRPVGLGVMGFQDALHVLRIPYANDAAVQFADTSMEAVCYYAYW 701
Query: 561 TSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDR-----------WDWGGLRDMISK 609
S+E+A G Y TY GS +GIL D + +R DW LR I +
Sbjct: 702 ASTELAEERGRYSTYKGSLWDRGILPQDSLKLLAQERGGYLETDLSSTMDWDSLRGRIQQ 761
Query: 610 NGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGL 669
G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL GL
Sbjct: 762 YGMRNSNCVAIAPTATISNIIGVSACIEPTYQNLYVKSNLSGEFTVVNDYLVRDLKARGL 821
Query: 670 WSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNI 729
W ++ + Y DGS+ +I +IP++L+ +Y T +E++ + LV+ A R +ID +QSLNI
Sbjct: 822 WDEVMVADLKYFDGSLARIDRIPQDLRDLYATAFEVEPQWLVEAASRRQKWIDQAQSLNI 881
Query: 730 HMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
+M + L + AWLRGLKT YYLR+ A K TV L
Sbjct: 882 YMAGASGKMLDDTYKLAWLRGLKT-TYYLRTIGATHVEKSTVSRGTL 927
>gi|282890381|ref|ZP_06298909.1| hypothetical protein pah_c016o113 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281499763|gb|EFB42054.1| hypothetical protein pah_c016o113 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 921
Score = 536 bits (1381), Expect = e-149, Method: Compositional matrix adjust.
Identities = 317/841 (37%), Positives = 479/841 (56%), Gaps = 64/841 (7%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
+YV DG + ++ K+ ++++ E C+P + +++ +Y GV +L+E A
Sbjct: 109 LYVTYPDGTKSPLNTQKMQSKMEHACADFK-ELCNPQELIEEMLKHLYDGVLFKELNESA 167
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSF---SETIKDMYNHYNE--RSGLKAPL 115
+A + P Y +AAR+++ +++ + SE +H+ + R G+ A
Sbjct: 168 IFSARSKIEKEPAYNYVAARLLLQDIYNEVFEQECHPSEVANLHVSHFEQYIRKGVMAKR 227
Query: 116 IADDVYDI-IMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRV 174
+ +++ + K A LDS RD + Y G +TL YL+ V+ +E PQ+ MRV
Sbjct: 228 LTPELFGYDLEKLAQNLDS----SRDKLFTYIGVQTLYDRYLIHVKNDRIETPQYFWMRV 283
Query: 175 AVGIHKDDIDS----AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEG 230
A+G+ ++ ++ AI+ Y+++SQ F ++PTLFN+G+ QLSSC+L ++DD +
Sbjct: 284 AMGLALNEKENREERAIEFYNVLSQFHFISSTPTLFNSGSLHPQLSSCYLSTVQDDLV-N 342
Query: 231 IYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGG 290
I+ + + A +SK +GGIG NIRATG+ I GTNG + G+VP L+V NDTA V+QGG
Sbjct: 343 IFKVIADNASLSKWSGGIGNDWTNIRATGATIHGTNGLTQGVVPFLKVANDTAVAVNQGG 402
Query: 291 GKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSL 350
KRKGA YLE WH DI +F++LRKN G E R D+ A W+PDLFM+RV+ +W+L
Sbjct: 403 -KRKGAVCAYLETWHLDIEDFVELRKNTGDERRRTHDMNTANWIPDLFMKRVREQSVWTL 461
Query: 351 FCPNEAPGLADCWGTEFERLYTKYEK---EGKAK--KVVQAQNLWFEILKSQIETGTPYM 405
F P++ P L D +G EFE+ Y +YE+ EGK K KV+ A +LW +++ ETG P+M
Sbjct: 462 FNPSDTPDLHDLYGIEFEKRYCEYERLAQEGKIKLFKVIPAMDLWRKMITMLFETGHPWM 521
Query: 406 LFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESH 465
FKD N +S Q + G + SSNLCTE++ TS ETAVCNL SI L ++
Sbjct: 522 TFKDPSNIRSPQSHAGVVHSSNLCTEILLNTSENETAVCNLGSINLAAHI---------- 571
Query: 466 PSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQ 525
K + D + LA+ L+ +ID+NYYP + AR SNLRHRP+G+G+
Sbjct: 572 ----------KGDFLDEQFLAKTIRTAMRMLDNVIDINYYPTKEARESNLRHRPVGLGLM 621
Query: 526 GLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGIL 585
G D + +DS EA + E I YHA+ S+E+A G Y +Y GS S+GIL
Sbjct: 622 GFQDALYHFRIAYDSQEAVEFADASMEMISYHAILASTELAKERGVYSSYRGSKWSQGIL 681
Query: 586 QPDMWGVNPSDRW-----------DWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNE 634
D + ++R DW +R I K+G+RN +A PTA+ + I G ++
Sbjct: 682 PIDSIALLDNERKGYLHMDRTSKKDWSVVRKEIQKHGMRNCNTMAIAPTATIAHISGLSQ 741
Query: 635 CFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEE 694
EP S +Y + LSGEF V+N+ L+ DL E LW+ + +++ Y DGSVQ+I Q PE+
Sbjct: 742 SIEPTFSLLYVKSNLSGEFAVLNEWLVKDLKERDLWNQDMLDELKYYDGSVQEIEQFPED 801
Query: 695 LKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTG 754
LK +YKT +EI+ K L++ A R +ID QSLN++++ P+ KL+ ++ AW +GLKT
Sbjct: 802 LKGLYKTAFEIEPKWLIECASRRQKWIDMGQSLNLYVNAPDGRKLSDMYLLAWEKGLKT- 860
Query: 755 MYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAKMAQMV---------CSLTNREECMA 805
YYLRS+AA K T+D + P+ A + V CSL+ +EC +
Sbjct: 861 TYYLRSKAATQVEKSTLDINKKGIQPRWMKSRSASGSIRVERDSSIPKSCSLSG-DECES 919
Query: 806 C 806
C
Sbjct: 920 C 920
>gi|421895461|ref|ZP_16325862.1| ribonucleoside reductase 1 (large chain) protein [Ralstonia
solanacearum MolK2]
gi|206586626|emb|CAQ17212.1| ribonucleoside reductase 1 (large chain) protein [Ralstonia
solanacearum MolK2]
Length = 987
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 304/770 (39%), Positives = 436/770 (56%), Gaps = 47/770 (6%)
Query: 32 EHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKN-- 89
+ DP + ++ +Y+GV SQ+ + A A + P Y+ ARI++ + +
Sbjct: 180 DAVDPEPILKETVKNLYEGVPMSQVYDSAILAARTLIEKDPAYSQATARILLHTIRREIL 239
Query: 90 ----TKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDY 145
T+ + D + + +R G+ A L+ D + + A+L + + RD ++Y
Sbjct: 240 GEEVTQAEMAARYVDYFPQFIKR-GINAGLLDDTLAQF---DLAKLGAALDASRDLQFNY 295
Query: 146 FGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHAS 202
G +TL Y L + K +E PQ MRVA+G+ ++ID AI+ Y ++S F ++
Sbjct: 296 LGLQTLYDRYFLHISDKRIEMPQAFFMRVAMGLSLNEIDREARAIEFYQLLSSFDFMSST 355
Query: 203 PTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYI 262
PTLFN+GT R+QLSSC+L + DD ++GIY+ LKE A++SK AGG+G N+RA GS+I
Sbjct: 356 PTLFNSGTCRSQLSSCYLTTVSDD-LDGIYEALKENALLSKFAGGLGNDWTNVRALGSHI 414
Query: 263 RGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEE 322
+GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G +
Sbjct: 415 KGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDR 473
Query: 323 HRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----E 377
R D+ A W+PDLFM+RV NG W+LF P+ P L D G FE+ Y YE+ E
Sbjct: 474 RRTHDMNTANWIPDLFMKRVMENGEWTLFSPSTCPDLHDKVGRAFEQAYLGYEEKVARGE 533
Query: 378 GKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTS 437
K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ T+
Sbjct: 534 ITLFKKMPAMQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTN 593
Query: 438 PTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLN 497
+E AVCNL S+ L ++ + + + D +KL + I L+
Sbjct: 594 DSEIAVCNLGSVNLVAHLVQ---------------QADGSYALDHDKLKKTVRIAMRMLD 638
Query: 498 KIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYH 557
+ID+NYY V+ AR SNLRHRP+G+GV G D +L +P+ + A Q E + Y+
Sbjct: 639 NVIDINYYAVKKARDSNLRHRPVGLGVMGFQDALHVLRIPYANEAAVQFADTSMEAVCYY 698
Query: 558 ALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDR-----------WDWGGLRDM 606
A S+E+A G Y TY GS +GIL D + +R DW LR
Sbjct: 699 AYWASTELAEERGRYSTYKGSLWDRGILPQDSLKLLAQERGGYLEADLSSTMDWDSLRGR 758
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
I + G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL
Sbjct: 759 IQQYGMRNSNCVAIAPTATISNIIGVSACIEPTYQNLYVKSNLSGEFTVVNDYLVRDLKA 818
Query: 667 MGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQS 726
GLW ++ + Y DGS+ +I +IP++L+ +Y T +E++ + LV+ A R +ID +QS
Sbjct: 819 RGLWDEVMVADLKYFDGSLARIDRIPQDLRDLYATAFEVEPQWLVEAASRRQKWIDQAQS 878
Query: 727 LNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
LNI+M + L + AWLRGLKT YYLR+ A K TV L
Sbjct: 879 LNIYMAGASGKMLDDTYKLAWLRGLKT-TYYLRTIGATHVEKSTVSRGTL 927
>gi|33598410|ref|NP_886053.1| ribonucleotide-diphosphate reductase subunit alpha [Bordetella
parapertussis 12822]
gi|33603350|ref|NP_890910.1| ribonucleotide-diphosphate reductase subunit alpha [Bordetella
bronchiseptica RB50]
gi|410474442|ref|YP_006897723.1| ribonucleoside-diphosphate reductase subunit alpha [Bordetella
parapertussis Bpp5]
gi|427816360|ref|ZP_18983424.1| ribonucleoside-diphosphate reductase alpha chain [Bordetella
bronchiseptica 1289]
gi|33574539|emb|CAE39186.1| ribonucleoside-diphosphate reductase alpha chain [Bordetella
parapertussis]
gi|33577474|emb|CAE34739.1| ribonucleoside-diphosphate reductase alpha chain [Bordetella
bronchiseptica RB50]
gi|408444552|emb|CCJ51310.1| ribonucleoside-diphosphate reductase alpha chain [Bordetella
parapertussis Bpp5]
gi|410567360|emb|CCN24931.1| ribonucleoside-diphosphate reductase alpha chain [Bordetella
bronchiseptica 1289]
Length = 975
Score = 536 bits (1380), Expect = e-149, Method: Compositional matrix adjust.
Identities = 310/792 (39%), Positives = 447/792 (56%), Gaps = 54/792 (6%)
Query: 7 DGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAA 66
+G + + + A ++ GL+ ++ D + ++ +Y GV ++ + A A A
Sbjct: 158 NGVRRPLDLAALRATIEAAGEGLT-QYTDTEAILKETVKNLYDGVPVDEVFKSAILAARA 216
Query: 67 MTTNHPDYASLAARIVVSNLHKNTKKSFSETIK--DMYNHYNE------RSGLKAPLIAD 118
+ P Y+ + AR++ LH K+ E + DM Y E + G++ L+
Sbjct: 217 LVEKDPAYSQVTARLL---LHTIRKEVLGEEVSQADMATRYAEYFPAFIQRGIEGGLLDA 273
Query: 119 DVYDIIMKNAAR-LDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVG 177
+ + ++ A+ LD RD + Y G +TL Y L V+G +E PQ MRVA+G
Sbjct: 274 KLAEYDLERVAKALDGR----RDLQFGYLGLQTLYDRYFLHVRGTRIELPQVFFMRVAMG 329
Query: 178 IHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
+ + D AI+ Y ++S F ++PTLFN+GT +QLSSC+L + DD +EGIYD
Sbjct: 330 LALREADREARAIEFYEILSSFDFMSSTPTLFNSGTLHSQLSSCYLTTVSDD-LEGIYDA 388
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+KE A+++K AGG+G +RA S+I+GTNG S G+VP L+V NDTA V+QGG KRK
Sbjct: 389 IKENALLAKYAGGLGNDWTPVRALRSHIKGTNGESQGVVPFLKVVNDTAVAVNQGG-KRK 447
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA YLE WH DI EFL+LRKN G E R D+ A W+PDLFM+RV NG W+LF P+
Sbjct: 448 GAVCTYLETWHLDIEEFLELRKNTGDERRRTHDMNTANWIPDLFMKRVMENGEWTLFSPS 507
Query: 355 EAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQIETGTPYMLFKD 409
+ P L D +G FE+ Y YE E K K + A +LW ++L ETG P++ FKD
Sbjct: 508 DCPDLHDKYGKAFEQAYAGYEAKVASGELKLFKKMPAVSLWRKMLSMLFETGHPWITFKD 567
Query: 410 TCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKL 469
CN +S QQ++G + SSNLCTE+ T+ TE AVCNL S+ L +++ PS
Sbjct: 568 PCNIRSPQQHVGVVHSSNLCTEITLNTNATEIAVCNLGSVNLVAHMK---------PSAN 618
Query: 470 VGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
G D +KL G+ L+ +ID+NYY V+ AR SN RHRP+G+G+ G D
Sbjct: 619 GGYE------LDHDKLKRTIGVAMRMLDNVIDINYYAVDKARNSNERHRPVGMGIMGFQD 672
Query: 530 TFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDM 589
++ +P+ S +A E + YHA SSE+A G Y++Y GS S+GIL D
Sbjct: 673 CLHVMRVPYASQDAIDFADRSMEAVCYHAYWASSELAQERGRYQSYEGSLWSRGILPQDT 732
Query: 590 WG-----------VNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
V+ S DW LR I ++G+RNS +A PTA+ S I+G + C EP
Sbjct: 733 LAMLREERGGNVDVDDSSSLDWDTLRSRIKEHGMRNSNCIAIAPTATISNIIGVSACIEP 792
Query: 639 YTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAI 698
N+Y + LSGEF VVN +L+ DL ++GLW ++ + Y DGS+ +I ++P EL+ +
Sbjct: 793 TFQNLYVKSNLSGEFTVVNDYLVRDLKKLGLWDEVMVADLKYFDGSLSRIDRVPSELRKL 852
Query: 699 YKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYL 758
Y T +E++ LV+ A R +ID +QSLNI+M + KL + AW RGLKT YYL
Sbjct: 853 YATAFEVEPSWLVECASRRQKWIDQAQSLNIYMSGASGKKLDDTYKLAWQRGLKT-TYYL 911
Query: 759 RSRAAADAIKFT 770
R+ A A K T
Sbjct: 912 RTLGATSAEKST 923
>gi|338174004|ref|YP_004650814.1| ribonucleoside-diphosphate reductase subunit alpha [Parachlamydia
acanthamoebae UV-7]
gi|336478362|emb|CCB84960.1| ribonucleoside-diphosphate reductase subunit alpha [Parachlamydia
acanthamoebae UV-7]
Length = 951
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 317/841 (37%), Positives = 479/841 (56%), Gaps = 64/841 (7%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
+YV DG + ++ K+ ++++ E C+P + +++ +Y GV +L+E A
Sbjct: 139 LYVTYPDGTKSPLNTQKMQSKMEHACADFK-ELCNPQELIEEMLKHLYDGVLFKELNESA 197
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSF---SETIKDMYNHYNE--RSGLKAPL 115
+A + P Y +AAR+++ +++ + SE +H+ + R G+ A
Sbjct: 198 IFSARSKIEKEPAYNYVAARLLLQDIYNEVFEQECHPSEVANLHVSHFEQYIRKGVMAKR 257
Query: 116 IADDVYDI-IMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRV 174
+ +++ + K A LDS RD + Y G +TL YL+ V+ +E PQ+ MRV
Sbjct: 258 LTPELFGYDLEKLAQNLDS----SRDKLFTYIGVQTLYDRYLIHVKNDRIETPQYFWMRV 313
Query: 175 AVGIHKDDIDS----AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEG 230
A+G+ ++ ++ AI+ Y+++SQ F ++PTLFN+G+ QLSSC+L ++DD +
Sbjct: 314 AMGLALNEKENREERAIEFYNVLSQFHFISSTPTLFNSGSLHPQLSSCYLSTVQDDLV-N 372
Query: 231 IYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGG 290
I+ + + A +SK +GGIG NIRATG+ I GTNG + G+VP L+V NDTA V+QGG
Sbjct: 373 IFKVIADNASLSKWSGGIGNDWTNIRATGATIHGTNGLTQGVVPFLKVANDTAVAVNQGG 432
Query: 291 GKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSL 350
KRKGA YLE WH DI +F++LRKN G E R D+ A W+PDLFM+RV+ +W+L
Sbjct: 433 -KRKGAVCAYLETWHLDIEDFVELRKNTGDERRRTHDMNTANWIPDLFMKRVREQSVWTL 491
Query: 351 FCPNEAPGLADCWGTEFERLYTKYEK---EGKAK--KVVQAQNLWFEILKSQIETGTPYM 405
F P++ P L D +G EFE+ Y +YE+ EGK K KV+ A +LW +++ ETG P+M
Sbjct: 492 FNPSDTPDLHDLYGIEFEKRYCEYERLAQEGKIKLFKVIPAMDLWRKMITMLFETGHPWM 551
Query: 406 LFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESH 465
FKD N +S Q + G + SSNLCTE++ TS ETAVCNL SI L ++
Sbjct: 552 TFKDPSNIRSPQSHAGVVHSSNLCTEILLNTSENETAVCNLGSINLAAHI---------- 601
Query: 466 PSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQ 525
K + D + LA+ L+ +ID+NYYP + AR SNLRHRP+G+G+
Sbjct: 602 ----------KGDFLDEQFLAKTIRTAMRMLDNVIDINYYPTKEARESNLRHRPVGLGLM 651
Query: 526 GLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGIL 585
G D + +DS EA + E I YHA+ S+E+A G Y +Y GS S+GIL
Sbjct: 652 GFQDALYHFRIAYDSQEAVEFADASMEMISYHAILASTELAKERGVYSSYRGSKWSQGIL 711
Query: 586 QPDMWGVNPSDRW-----------DWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNE 634
D + ++R DW +R I K+G+RN +A PTA+ + I G ++
Sbjct: 712 PIDSIALLDNERKGYLHMDRTSKKDWSVVRKEIQKHGMRNCNTMAIAPTATIAHISGLSQ 771
Query: 635 CFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEE 694
EP S +Y + LSGEF V+N+ L+ DL E LW+ + +++ Y DGSVQ+I Q PE+
Sbjct: 772 SIEPTFSLLYVKSNLSGEFAVLNEWLVKDLKERDLWNQDMLDELKYYDGSVQEIEQFPED 831
Query: 695 LKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTG 754
LK +YKT +EI+ K L++ A R +ID QSLN++++ P+ KL+ ++ AW +GLKT
Sbjct: 832 LKGLYKTAFEIEPKWLIECASRRQKWIDMGQSLNLYVNAPDGRKLSDMYLLAWEKGLKT- 890
Query: 755 MYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAKMAQMV---------CSLTNREECMA 805
YYLRS+AA K T+D + P+ A + V CSL+ +EC +
Sbjct: 891 TYYLRSKAATQVEKSTLDINKKGIQPRWMKSRSASGSIRVERDSSIPKSCSLSG-DECES 949
Query: 806 C 806
C
Sbjct: 950 C 950
>gi|329902474|ref|ZP_08273119.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Oxalobacteraceae bacterium IMCC9480]
gi|327548766|gb|EGF33403.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Oxalobacteraceae bacterium IMCC9480]
Length = 969
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 309/800 (38%), Positives = 445/800 (55%), Gaps = 57/800 (7%)
Query: 4 VKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAET 63
V DG++ + ++ + GL +H D + + +Y GV +L + A
Sbjct: 155 VTEDGQRRLLDMQQVHKLIDAACIGLE-KHVDANAIFAETVKNLYDGVPVEELHKSAILA 213
Query: 64 AAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIK--DMYNHYNE------RSGLKAPL 115
A A+ P Y ++ ARI+ +H K+ F + + D HY E +G+ A L
Sbjct: 214 ARALMEKDPAYTTVTARIL---MHVIRKEVFGKEVAQADAQAHYLEYFPQFIHNGIAAEL 270
Query: 116 IADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVA 175
+ + + RL ++ DRD + Y G +TL Y L ++ +E PQ MRVA
Sbjct: 271 LDAKLAGFDLD---RLAKALVPDRDLQFGYIGLQTLYDRYFLHIRDIRIEMPQAFYMRVA 327
Query: 176 VGIHKDDI---DSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIY 232
+G+ ++ + AI+ Y+++S F ++PTLFN+GT R+QLSSC+L + DD +EGIY
Sbjct: 328 MGLALNEAKREERAIEFYNLLSSFDFMSSTPTLFNSGTLRSQLSSCYLTTVADD-LEGIY 386
Query: 233 DTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGK 292
D +K+ A+++K AGG+G +R+ G++I+GTNG S G+VP L+V NDTA V+QGG K
Sbjct: 387 DAIKDNALLAKYAGGLGNDWTPVRSLGAHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-K 445
Query: 293 RKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFC 352
RKGA YLE WH DI EFLDLRKN G + R D+ A W+PDLFM+RV G W LF
Sbjct: 446 RKGAVCAYLETWHMDIEEFLDLRKNTGDDRRRTHDMNTANWIPDLFMKRVMEKGSWMLFS 505
Query: 353 PNEAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQIETGTPYMLF 407
P+E P L D G FE YT YE E + K V+A +LW ++L ETG P++ F
Sbjct: 506 PSEVPDLHDKVGRAFEAAYTGYEAAAARGELRMFKKVEALDLWRKMLSMLFETGHPWITF 565
Query: 408 KDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPS 467
KD CN +S QQ++G + SSNLCTE+ T+ +E AVCNL S+ LP ++
Sbjct: 566 KDPCNIRSPQQHVGVVHSSNLCTEITLNTNESEIAVCNLGSVNLPAHM------------ 613
Query: 468 KLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
K+ D KL + I L+ +ID+NYY V+ AR SN+RHRP+G+G+ G
Sbjct: 614 --------KDGQLDHVKLQKTIRIAMRMLDNVIDINYYAVQKARDSNMRHRPVGLGIMGF 665
Query: 528 ADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQP 587
D ++ +P+ S EA E + Y+A S+E+A G Y +Y GS +GIL
Sbjct: 666 QDCLHIMRVPYASAEAVSFADKSMEAVCYYAYTASTELAEERGAYSSYKGSLWDRGILPQ 725
Query: 588 DMWGV-----------NPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
D + + S+ DW LR I + G+RNS VA PTA+ S I+G C
Sbjct: 726 DSLKLLMEERGGYLETDLSEAMDWTPLRARIKQFGMRNSNCVAIAPTATISNIIGVAACI 785
Query: 637 EPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELK 696
EP N+Y + LSGEF +N++L+ DL LW ++ + + Y DGS+ +I ++P+EL+
Sbjct: 786 EPTYQNLYVKSNLSGEFTEINEYLVRDLKARDLWDEVMISDLKYFDGSLARIDRVPQELR 845
Query: 697 AIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMY 756
AIY T +EI+ LV+ A R +ID +QSLNI+M + KL + AWLRGLKT Y
Sbjct: 846 AIYATAFEIEPSWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDETYKLAWLRGLKT-TY 904
Query: 757 YLRSRAAADAIKFTVDTSVL 776
YLR+ A K T T L
Sbjct: 905 YLRTIGATHTEKSTSKTGSL 924
>gi|398809048|ref|ZP_10567903.1| ribonucleoside-diphosphate reductase, alpha subunit [Variovorax sp.
CF313]
gi|398086342|gb|EJL76961.1| ribonucleoside-diphosphate reductase, alpha subunit [Variovorax sp.
CF313]
Length = 971
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 306/794 (38%), Positives = 450/794 (56%), Gaps = 51/794 (6%)
Query: 7 DGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAA 66
+G+ A+ +++ ++ GL +V++ + +Y GV ++ + + A
Sbjct: 156 NGELVALDLNELKGLIESACEGLGDSITAAPIVAETM-RNLYDGVPLDEVYKASILAART 214
Query: 67 MTTNHPDYASLAARIVVSNLHKNT--KKSFSETIKDMYNHYNE---RSGLKAPLIADDVY 121
+ PDY AR+++ + K ++ Y Y + G++ L+ +
Sbjct: 215 LIEKDPDYTFATARLLLHTIFKEIIGREVMPVERATAYADYFPQFIKKGVENELLDEK-- 272
Query: 122 DIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKD 181
++ + RL + + +RD +DY G +TL Y L V+ +E PQ MRVA+G+ +
Sbjct: 273 -LLQYDLPRLGAALKAERDNQFDYLGLQTLYDRYFLHVRKTRIELPQAFFMRVAMGLSLN 331
Query: 182 DIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKEC 238
+ID AI+ Y ++S F ++PTLFNAGT R+QLSSC+L + DD ++GIY+++KE
Sbjct: 332 EIDREARAIEFYEVLSSFDFMSSTPTLFNAGTLRSQLSSCYLTTVPDD-LDGIYESIKEN 390
Query: 239 AIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA 298
A++SK AGG+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG KRKGA
Sbjct: 391 ALLSKFAGGLGNDWTRVRALGSHIKGTNGESQGVVPFLKVVNDTAVAVNQGG-KRKGAVC 449
Query: 299 VYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPG 358
YLE WH DI EFL+LRKN G + R D+ A W+PDLFM RV G W+LF P+ P
Sbjct: 450 TYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMRRVMEKGTWTLFSPSNVPD 509
Query: 359 LADCWGTEFERLYTKYEKEG-----KAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNK 413
L D +G +FE+ Y YE++ K + +QA +LW ++L ETG P++ FKD CN
Sbjct: 510 LHDLFGADFEKAYVAYEEKAARGDIKPARTIQATDLWRKMLTMLFETGHPWITFKDACNV 569
Query: 414 KSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSR 473
+S QQ+ G + SSNLCTE+ TS TETAVCNL S+ L +++++ V
Sbjct: 570 RSPQQHAGVVHSSNLCTEITLNTSDTETAVCNLGSVNLLQHLKDGKV------------- 616
Query: 474 GSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFIL 533
D EKL L+ +ID+NYY V+ AR SNLRHRP+G+G+ G D
Sbjct: 617 -------DQEKLKRTISTAMRMLDNVIDINYYAVKKARDSNLRHRPVGLGLMGFQDALYE 669
Query: 534 LGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWG-- 591
L +P+ S EA Q + E I YHA S+E+A G Y +Y GS KGIL D
Sbjct: 670 LRIPYASQEAVQFADESMEAICYHAYWASTELARERGKYSSYKGSLWDKGILPIDSLDLL 729
Query: 592 ---------VNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSN 642
V+ S DW LR I +G+RNS VA PTA+ S I+G + EP N
Sbjct: 730 EKARGGYVEVDRSATLDWDTLRQKIKADGMRNSNCVAIAPTATISNIIGVDASIEPCFGN 789
Query: 643 IYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTV 702
+ + LSGEF V+N +L+ DL +GLW ++ + + DGS++ I ++P+++KA+Y T
Sbjct: 790 LSVKSNLSGEFTVINHYLVRDLKRLGLWDDVMVMDLKHFDGSLRPIDRVPQDVKALYATA 849
Query: 703 WEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRA 762
+E++ LV+ A R +ID +QSLNI+M + KL + AW+RGLKT YYLR+++
Sbjct: 850 FEVETTWLVEAAARRQKWIDQAQSLNIYMAGASGKKLDDTYKLAWVRGLKT-TYYLRTQS 908
Query: 763 AADAIKFTVDTSVL 776
A A K TV + L
Sbjct: 909 ATHAEKSTVQSGRL 922
>gi|381156536|ref|ZP_09865775.1| ribonucleoside-diphosphate reductase, alpha subunit [Thiorhodovibrio
sp. 970]
gi|380881873|gb|EIC23958.1| ribonucleoside-diphosphate reductase, alpha subunit [Thiorhodovibrio
sp. 970]
Length = 1019
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 317/867 (36%), Positives = 460/867 (53%), Gaps = 92/867 (10%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
+ V DG+ + +K+ + + GL E +P LV C ++ GV +D+
Sbjct: 183 LRVTLSDGRSVPLDQEKLATLVTDVCAGL--EAVEPQLVLDDACRNLFDGVKEQDVDQSL 240
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHK---------------------NTKKSFSETIK 99
+A A+ P Y+ +AAR+++ +L K + + + +
Sbjct: 241 IMSARALIEREPAYSQVAARLLLESLRKEALGFLGLPTPTTGRTTGQMADETAAGAACVT 300
Query: 100 DMYNHYNE------RSGLKAPLIADDV--YDIIMKNAARLDSEIIYDRDFDYDYFGFKTL 151
D Y + + G + L+ ++ YD++ RL + + +RD + Y G +TL
Sbjct: 301 DWAQSYAKYFSAYVKQGAELELLDTELTRYDLV-----RLGAALQPERDRQFTYLGLQTL 355
Query: 152 ERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNA 208
Y + G E PQ MRVA+G+ ++ID AI+ Y ++S F ++PTLFN+
Sbjct: 356 YDRYFIHKNGVRFEMPQAFFMRVAMGLAINEIDREARAIEFYELLSSFDFMSSTPTLFNS 415
Query: 209 GTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGT 268
GT R QLSSC+L + DD ++GIY +K+ A++SK AGG+G +R G++I+GTNG
Sbjct: 416 GTLRPQLSSCYLTTVPDD-LDGIYGAIKDNALLSKFAGGLGNDWTQVRGMGAHIKGTNGK 474
Query: 269 SNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDL 328
S G+VP L+V NDTA V+QGG KRKGA YLE WH D+ EFL+LRKN G + R D+
Sbjct: 475 SQGVVPFLKVANDTAVAVNQGG-KRKGAVCAYLETWHIDVEEFLELRKNTGDDRRRCHDM 533
Query: 329 FYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKA-----KKV 383
A WVPDLFM+RV W+LF PNE P L D G FE+ Y YE A K
Sbjct: 534 NSANWVPDLFMKRVAEEDDWTLFSPNETPDLHDLTGQAFEQAYLAYEARAAAGEMSVSKT 593
Query: 384 VQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAV 443
V+A +LW ++L ETG P++ FKD CN + Q+ G + SSNLCTE+ +T+ E AV
Sbjct: 594 VKAVDLWRKMLAMLFETGHPWIAFKDPCNLRYTNQHAGVVHSSNLCTEITLHTNDQEIAV 653
Query: 444 CNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVN 503
CNL SI L +V E G+ D EKL + L+ +ID N
Sbjct: 654 CNLGSINLAAHVTERGL--------------------DTEKLQKTARTAMRMLDNVIDYN 693
Query: 504 YYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSS 563
+Y V AR SNLRHRP+G+G+ G D L MP+ S EA E I Y+A+ S+
Sbjct: 694 FYNVPQARSSNLRHRPVGLGLMGFQDALYKLRMPYTSQEAVSFADRSMELISYYAIEASA 753
Query: 564 EIAAREGPYETYHGSPVSKGILQPDMWGV-----------NPSDRWDWGGLRDMISKNGV 612
++AA G Y ++ GS S+G+L D + N DW LR+ + G+
Sbjct: 754 DLAAERGSYTSFPGSLWSQGVLPIDSIALLEQGRGGYLQTNRDSTLDWDSLREKVRGQGM 813
Query: 613 RNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSP 672
RNS +A PTA+ S I+G ++ EP N++ + LSGEF VVN +L+ DL +GLW
Sbjct: 814 RNSNCMAIAPTATISNIVGVSQSIEPTYQNLFVKSNLSGEFTVVNPYLVADLKALGLWDS 873
Query: 673 IIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMD 732
++ N + Y DGSVQ I ++P++LKA+Y T +EI + L++ A R ++D +QSLN++M
Sbjct: 874 VMVNDLKYYDGSVQPIDRVPDDLKALYATAFEIDPRWLIEAASRRQKWLDQAQSLNLYMR 933
Query: 733 QPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTS-------------VLKEN 779
+PN KL +L+ AW+RGLKT YYLRS A K T+ S +
Sbjct: 934 EPNGKKLDNLYKLAWVRGLKT-TYYLRSMGATHVEKSTMSDSSRANQLSAVGGSYLAAHG 992
Query: 780 PKVTDDDDAKMAQMVCSLTNREECMAC 806
K D A CS+ + EC +C
Sbjct: 993 GKPHSDGKGASALSACSIDD-PECESC 1018
>gi|412341327|ref|YP_006970082.1| ribonucleoside-diphosphate reductase subunit alpha [Bordetella
bronchiseptica 253]
gi|408771161|emb|CCJ55960.1| ribonucleoside-diphosphate reductase alpha chain [Bordetella
bronchiseptica 253]
Length = 975
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 310/792 (39%), Positives = 446/792 (56%), Gaps = 54/792 (6%)
Query: 7 DGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAA 66
+G + + + A ++ GL+ ++ D + ++ +Y GV ++ + A A A
Sbjct: 158 NGVRRPLDLAALRATIEAAGEGLT-QYTDTEAILKETVKNLYDGVPVDEVFKSAILAARA 216
Query: 67 MTTNHPDYASLAARIVVSNLHKNTKKSFSETIK--DMYNHYNE------RSGLKAPLIAD 118
+ P Y+ + AR++ LH K+ E + DM Y E + G++ L+
Sbjct: 217 LVEKDPAYSQVTARLL---LHTIRKEVLGEEVSQADMATRYAEYFPAFIQRGIEGGLLDA 273
Query: 119 DVYDIIMKNAAR-LDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVG 177
+ + ++ A+ LD RD + Y G +TL Y L V+G +E PQ MRVA+G
Sbjct: 274 KLAEYDLERVAKALDGR----RDLQFGYLGLQTLYDRYFLHVRGTRIELPQVFFMRVAMG 329
Query: 178 IHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
+ + D AI+ Y ++S F ++PTLFN+GT +QLSSC+L + DD +EGIYD
Sbjct: 330 LALREADREARAIEFYEILSSFDFMSSTPTLFNSGTLHSQLSSCYLTTVSDD-LEGIYDA 388
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+KE A+++K AGG+G +RA S+I+GTNG S G+VP L+V NDTA V+QGG KRK
Sbjct: 389 IKENALLAKYAGGLGNDWTPVRALRSHIKGTNGESQGVVPFLKVVNDTAVAVNQGG-KRK 447
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA YLE WH DI EFL+LRKN G E R D+ A W+PDLFM+RV NG W+LF P+
Sbjct: 448 GAVCTYLETWHLDIEEFLELRKNTGDERRRTHDMNTANWIPDLFMKRVMENGEWTLFSPS 507
Query: 355 EAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQIETGTPYMLFKD 409
+ P L D +G FE+ Y YE E K K A +LW ++L ETG P++ FKD
Sbjct: 508 DCPDLHDKYGKAFEQAYAGYEAKVASGELKLFKKTPAVSLWRKMLSMLFETGHPWITFKD 567
Query: 410 TCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKL 469
CN +S QQ++G + SSNLCTE+ T+ TE AVCNL S+ L +++ PS
Sbjct: 568 PCNIRSPQQHVGVVHSSNLCTEITLNTNATEIAVCNLGSVNLVAHMK---------PSAN 618
Query: 470 VGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
G D +KL G+ L+ +ID+NYY V+ AR SN RHRP+G+G+ G D
Sbjct: 619 GGYE------LDHDKLKRTIGVAMRMLDNVIDINYYAVDKARNSNERHRPVGMGIMGFQD 672
Query: 530 TFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDM 589
++ +P+ S +A E + YHA SSE+A G Y++Y GS S+GIL D
Sbjct: 673 CLHVMRVPYASQDAIDFADRSMEAVCYHAYWASSELAQERGRYQSYEGSLWSRGILPQDT 732
Query: 590 WG-----------VNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
V+ S DW LR I ++G+RNS +A PTA+ S I+G + C EP
Sbjct: 733 LAMLREERGGNVDVDDSSSLDWDTLRSRIKEHGMRNSNCIAIAPTATISNIIGVSACIEP 792
Query: 639 YTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAI 698
N+Y + LSGEF VVN +L+ DL ++GLW ++ + Y DGS+ +I ++P EL+ +
Sbjct: 793 TFQNLYVKSNLSGEFTVVNDYLVRDLKKLGLWDEVMVADLKYFDGSLSRIDRVPSELRKL 852
Query: 699 YKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYL 758
Y T +E++ LV+ A R +ID +QSLNI+M + KL + AW RGLKT YYL
Sbjct: 853 YATAFEVEPSWLVECASRRQKWIDQAQSLNIYMSGASGKKLDDTYKLAWQRGLKT-TYYL 911
Query: 759 RSRAAADAIKFT 770
R+ A A K T
Sbjct: 912 RTLGATSAEKST 923
>gi|54297687|ref|YP_124056.1| ribonucleotide-diphosphate reductase subunit alpha [Legionella
pneumophila str. Paris]
gi|53751472|emb|CAH12890.1| hypothetical protein lpp1738 [Legionella pneumophila str. Paris]
Length = 942
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 318/841 (37%), Positives = 460/841 (54%), Gaps = 76/841 (9%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
+ + +G+ + + D++ +K+ LS +PV+ + +Y + +
Sbjct: 142 LLITMPNGEVQPLDMDRVNTIVKESCRDLSNVKAEPVI--KDALRNLYNQAKYEDVHKAL 199
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHK--------NTKKSFSETIKDM---YNHYNER- 108
+A A+ P+Y ++AR+++ +L ++ +F E + + Y E+
Sbjct: 200 IMSARALVEKEPNYTYVSARLLLDSLRSEALTKLNIKSEATFDEMAQIYPVYFKSYIEQG 259
Query: 109 --SGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVER 166
G+ P +AD +D+ +L ++ +RD + Y +TL Y + +G E
Sbjct: 260 IAQGMLDPKMAD--FDL-----DKLSQALLPERDMKFTYLSLQTLYDRYFIHERGVRYEL 312
Query: 167 PQHMLMRVAVGI-----HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLV 221
PQ MRVA+G+ HK++ AI+ Y ++S + ++PTLFN+GT R QLSSC+L
Sbjct: 313 PQAFFMRVAMGLALREQHKEE--KAIEFYQLLSSFDYMSSTPTLFNSGTVRPQLSSCYLT 370
Query: 222 CMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFND 281
+ D ++GIY +K+ A++SK AGG+G +RA G++I+GTNG S G+VP L V +
Sbjct: 371 TVPD-HLDGIYSAIKDNALLSKYAGGLGNDWTPVRAMGAHIKGTNGKSQGVVPFLNVADA 429
Query: 282 TARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMER 341
TA V+QGG KRKGA YLE WH D+ EFL+LRKN G + R D+ ALWVPDLFM+R
Sbjct: 430 TAVAVNQGG-KRKGAVCAYLECWHRDVEEFLELRKNTGDDRRRTHDMNTALWVPDLFMKR 488
Query: 342 VQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKA-----KKVVQAQNLWFEILKS 396
V+ +G W+LF P+E P L D +G FE LY +YE++ + K + A LW +L
Sbjct: 489 VREDGNWTLFSPDEVPDLHDQYGKAFEALYVEYEEKARQGIIRNTKTISAVKLWRRMLSM 548
Query: 397 QIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVR 456
ETG P++ FKD CN +S QQ+ G I SSNLCTE+ TS E AVCNL S+ LP ++
Sbjct: 549 LFETGHPWLTFKDPCNLRSPQQHAGVIHSSNLCTEITLNTSEEEIAVCNLGSVNLPAHI- 607
Query: 457 EMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLR 516
KN D +KL L+ +ID+NYY V AR SNL+
Sbjct: 608 -------------------KNGKLDEQKLKRTISTAVRMLDNVIDINYYSVPQARNSNLQ 648
Query: 517 HRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYH 576
HRPIG+G+ G D L M + S EA + E I Y+A+ S ++A G Y TY
Sbjct: 649 HRPIGLGIMGFQDALYELKMDYASKEAIEFADSSMELISYYAIEASCDLAKERGSYSTYE 708
Query: 577 GSPVSKGILQPDMWGV-----------NPSDRWDWGGLRDMISKNGVRNSLLVAPMPTAS 625
GS SKGIL D + + S + DW LR + G+RNS ++A PTA+
Sbjct: 709 GSLWSKGILPIDSINLLQQSRNKYLEQDRSQKLDWEPLRVKVRTQGMRNSNVMAIAPTAT 768
Query: 626 TSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSV 685
S I G ++ EP N+Y + LSGEF VVN +L+ DL + LW ++ N + Y +GSV
Sbjct: 769 ISNICGVSQSIEPTYQNLYVKSNLSGEFTVVNPYLVADLKTLNLWDEVMVNDLKYFNGSV 828
Query: 686 QKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFH 745
Q I +IPEELK Y T +EI LV+ A R +ID +QSLNI+M QP+ KL L+ H
Sbjct: 829 QPISRIPEELKRRYATSFEIDPMWLVEAASRRQKWIDQAQSLNIYMAQPSGKKLDQLYMH 888
Query: 746 AWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAKMAQMVCSLTNREECMA 805
AW+RGLKT YYLRS A++A K TV L + + A CS+T+ +C A
Sbjct: 889 AWIRGLKT-TYYLRSLGASNAEKSTVTDGALNAVKLIDTEPKA------CSITD-PDCEA 940
Query: 806 C 806
C
Sbjct: 941 C 941
>gi|344172466|emb|CCA85109.1| ribonucleoside-diphosphate reductase, alpha subunit [Ralstonia
syzygii R24]
Length = 987
Score = 535 bits (1379), Expect = e-149, Method: Compositional matrix adjust.
Identities = 304/770 (39%), Positives = 437/770 (56%), Gaps = 47/770 (6%)
Query: 32 EHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKN-- 89
E DP + ++ +Y+GV SQ+ + A A + P Y+ + ARI++ + +
Sbjct: 180 EAVDPEPILKETVKNLYEGVPMSQVYDSAILAARTLIEKDPAYSQVTARILLHTIRREIL 239
Query: 90 ----TKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDY 145
T+ + D + + +R G+ A L+ + + + A+L + + RD ++Y
Sbjct: 240 GEEVTQAEMAARYADYFPQFIKR-GINAGLLDEKLAQF---DLAKLGAALDASRDLQFNY 295
Query: 146 FGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHAS 202
G +TL Y L + K +E PQ MRVA+G+ ++ID AI+ Y ++S F ++
Sbjct: 296 LGLQTLFDRYFLHISEKRIEMPQAFFMRVAMGLSLNEIDRESRAIEFYQLLSSFDFMSST 355
Query: 203 PTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYI 262
PTLFN+GT R+QLSSC+L + DD ++GIY+ LKE A++SK AGG+G N+RA GS+I
Sbjct: 356 PTLFNSGTCRSQLSSCYLTTVSDD-LDGIYEALKENALLSKFAGGLGNDWTNVRALGSHI 414
Query: 263 RGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEE 322
+GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G +
Sbjct: 415 KGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDR 473
Query: 323 HRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----E 377
R D+ A W+PDLFM+RV NG W+LF P+ P L D G FE Y YE+ E
Sbjct: 474 RRTHDMNTANWIPDLFMKRVMENGEWTLFSPSTCPDLHDKVGKAFETAYLGYEEKVARGE 533
Query: 378 GKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTS 437
K K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ T+
Sbjct: 534 IKLFKKMPAMQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTN 593
Query: 438 PTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLN 497
+E AVCNL S+ L ++ + + + D +KL + L+
Sbjct: 594 DSEIAVCNLGSVNLVAHLIK---------------QADGSVALDHDKLKKTVRTAMRMLD 638
Query: 498 KIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYH 557
+ID+NYY V+ AR SNLRHRP+G+G+ G D+ +L +P+ S A Q E + Y+
Sbjct: 639 NVIDINYYAVKKARDSNLRHRPVGLGIMGFQDSLHVLRIPYASEVAVQFADTSMEAVCYY 698
Query: 558 ALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDR-----------WDWGGLRDM 606
A S+E+A G Y TY GS +GIL D + +R DW LR
Sbjct: 699 AYWASTELAEERGRYSTYKGSLWDRGILPQDSLKLLAQERGGYLEADLSSSMDWDSLRAR 758
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
I + G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL
Sbjct: 759 IQQYGMRNSNCVAIAPTATISNIIGVSACIEPTYQNLYVKSNLSGEFTVVNDYLVRDLKA 818
Query: 667 MGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQS 726
GLW ++ + Y DGS+ +I +IP++L+ +Y T +E++ + LV+ A R +ID +QS
Sbjct: 819 RGLWDEVMVADLKYFDGSLARIDRIPQDLRDLYATAFEVEPQWLVEAASRRQKWIDQAQS 878
Query: 727 LNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
LNI+M + L + AWLRGLKT YYLR+ A K TV L
Sbjct: 879 LNIYMAGASGKMLDDTYKLAWLRGLKT-TYYLRTIGATHVEKSTVSRGTL 927
>gi|270156778|ref|ZP_06185435.1| ribonucleotide-diphosphate reductase alpha subunit [Legionella
longbeachae D-4968]
gi|289164773|ref|YP_003454911.1| ribonucleoside-diphosphate reductase, alpha subunit [Legionella
longbeachae NSW150]
gi|269988803|gb|EEZ95057.1| ribonucleotide-diphosphate reductase alpha subunit [Legionella
longbeachae D-4968]
gi|288857946|emb|CBJ11806.1| putative ribonucleoside-diphosphate reductase, alpha subunit
[Legionella longbeachae NSW150]
Length = 941
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 315/807 (39%), Positives = 444/807 (55%), Gaps = 64/807 (7%)
Query: 30 SIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIV-----VS 84
++EH D V + +Y + + + A + P+Y ++AR++ +
Sbjct: 168 NLEHVDAEPVIKDALRNLYNEAKFADVHKALIMAARTLVEKEPNYTYVSARLLLDCLRIE 227
Query: 85 NLHK---NTKKSFSETIKDMYNHYNE---RSGLKAPLIADDVYDIIMKNAARLDSEIIYD 138
LHK +F E + +Y Y + G+K ++ + + D ++ +L ++ +
Sbjct: 228 ALHKLGIEADATFDE-MSQLYPAYFKIYVAHGIKQGMLDEKMADFDLE---KLGKALLPE 283
Query: 139 RDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGI---HKDDIDSAIKTYHMMSQ 195
RD + Y +TL Y + QG E PQ MRVA+G+ KD + AI+ Y ++S
Sbjct: 284 RDMKFTYLSLQTLYDRYFIHDQGIRYELPQAFFMRVAMGLAIREKDKNEKAIEFYQLLSS 343
Query: 196 RWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNI 255
+ ++PTLFN+GT R QLSSC+L + D ++GIY +K+ A++SK AGG+G +
Sbjct: 344 FDYMSSTPTLFNSGTIRPQLSSCYLTTVPD-HLDGIYSAIKDNALLSKYAGGLGNDWTPV 402
Query: 256 RATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLR 315
RA GS+I+GTNG S G+VP L V + TA V+QGG KRKGA YLE WH D+ EFL+LR
Sbjct: 403 RAMGSHIKGTNGKSQGVVPFLNVADATAVAVNQGG-KRKGAVCAYLECWHKDVEEFLELR 461
Query: 316 KNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYE 375
KN G + R D+ ALW+PDLFM RV+ + W+LF P+E P L D +G FE LY KYE
Sbjct: 462 KNTGDDRRRTHDMNTALWIPDLFMMRVREDADWTLFSPDEVPELHDQFGKAFEALYNKYE 521
Query: 376 KEG-----KAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCT 430
++ K K V A LW ++L ETG P+M FKD CN +S QQ+ G + SSNLCT
Sbjct: 522 EKAHQGLMKNVKTVSAVKLWRKMLSMLFETGHPWMTFKDPCNLRSPQQHCGVVHSSNLCT 581
Query: 431 EVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTG 490
E+ TS E AVCNL SI LP ++ KN D EKL +
Sbjct: 582 EITLNTSEEEIAVCNLGSINLPAHI--------------------KNGKLDIEKLKQTIK 621
Query: 491 IVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDI 550
L+ +ID+NYY V AR SNL+HRP+G+G+ G D L + + S EA +
Sbjct: 622 TAVRMLDNVIDINYYSVPQARNSNLKHRPVGLGLMGFQDALYELKIDYASEEAVEFADSS 681
Query: 551 FETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGV-----------NPSDRWD 599
E I Y+A+ S ++A G Y +Y GS SKGIL D + + S R D
Sbjct: 682 MELISYYAIEASCDLAKERGSYSSYEGSLWSKGILPIDSINLLQQARNKYLEQDRSQRLD 741
Query: 600 WGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKH 659
W LR + G+RNS ++A PTA+ S I G + EP N+Y + LSGEF V+N +
Sbjct: 742 WESLRIKVRTQGMRNSNVMAIAPTATISNICGVAQSIEPTYQNLYVKSNLSGEFTVINPY 801
Query: 660 LLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGC 719
L+ DL + LW ++ N + Y +GSVQ I +IP +LK Y T +EI LVD A R
Sbjct: 802 LVADLKALELWDEVMVNDLKYFNGSVQPISRIPADLKKRYATSFEIDPIWLVDAASRRQK 861
Query: 720 YIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKEN 779
+ID +QSLNI+M +P+ KL L+ HAW+RGLKT YYLRS A++A K TV S L
Sbjct: 862 WIDQAQSLNIYMAEPSGKKLDQLYMHAWIRGLKT-TYYLRSMGASNAEKSTVTDSALNAV 920
Query: 780 PKVTDDDDAKMAQMVCSLTNREECMAC 806
+T+ A CS+ + +C AC
Sbjct: 921 KIMTE------APKACSILD-PDCEAC 940
>gi|148359318|ref|YP_001250525.1| ribonucleoside-diphosphate reductase subunit alpha [Legionella
pneumophila str. Corby]
gi|148281091|gb|ABQ55179.1| ribonucleoside-diphosphate reductase, alpha subunit [Legionella
pneumophila str. Corby]
Length = 917
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 318/841 (37%), Positives = 460/841 (54%), Gaps = 76/841 (9%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
+ + +G+ + + D++ +K+ LS +PV+ + +Y + +
Sbjct: 117 LLITMPNGEVQPLDMDRVNTIVKESCRDLSNVKAEPVI--KDALRNLYNQAKYEDVHKAL 174
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKN--------TKKSFSETIKDM---YNHYNER- 108
+A A+ P+Y ++AR+++ +L ++ +F E + + Y E+
Sbjct: 175 IMSARALVEKEPNYTYVSARLLLDSLRSEALTKLNIKSEATFDEMAQIYPVYFKSYIEQG 234
Query: 109 --SGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVER 166
G+ P +AD +D+ +L ++ +RD + Y +TL Y + +G E
Sbjct: 235 IAQGMLDPKMAD--FDL-----DKLSQALLPERDMKFTYLSLQTLYDRYFIHERGVRYEL 287
Query: 167 PQHMLMRVAVGI-----HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLV 221
PQ MRVA+G+ HK++ AI+ Y ++S + ++PTLFN+GT R QLSSC+L
Sbjct: 288 PQAFFMRVAMGLALREQHKEE--KAIEFYQLLSSFDYMSSTPTLFNSGTVRPQLSSCYLT 345
Query: 222 CMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFND 281
+ D ++GIY +K+ A++SK AGG+G +RA G++I+GTNG S G+VP L V +
Sbjct: 346 TVPD-HLDGIYSAIKDNALLSKYAGGLGNDWTPVRAMGAHIKGTNGKSQGVVPFLNVADA 404
Query: 282 TARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMER 341
TA V+QGG KRKGA YLE WH D+ EFL+LRKN G + R D+ ALWVPDLFM+R
Sbjct: 405 TAVAVNQGG-KRKGAVCAYLECWHRDVEEFLELRKNTGDDRRRTHDMNTALWVPDLFMKR 463
Query: 342 VQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKA-----KKVVQAQNLWFEILKS 396
V+ +G W+LF P+E P L D +G FE LY +YE++ + K + A LW +L
Sbjct: 464 VREDGNWTLFSPDEVPDLHDQYGKAFEALYVEYEEKARQGIIRNTKTISAVKLWRRMLSM 523
Query: 397 QIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVR 456
ETG P++ FKD CN +S QQ+ G I SSNLCTE+ TS E AVCNL SI LP ++
Sbjct: 524 LFETGHPWLTFKDPCNLRSPQQHAGVIHSSNLCTEITLNTSEEEIAVCNLGSINLPAHI- 582
Query: 457 EMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLR 516
KN D +KL L+ +ID+NYY V AR SNL+
Sbjct: 583 -------------------KNGKLDEQKLKRTISTAVRMLDNVIDINYYSVPQARNSNLQ 623
Query: 517 HRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYH 576
HRPIG+G+ G D L M + S EA + E I Y+A+ S ++A G Y TY
Sbjct: 624 HRPIGLGIMGFQDALYELKMDYASKEAIEFADSSMELISYYAIEASCDLAKERGSYSTYE 683
Query: 577 GSPVSKGILQPDMWGV-----------NPSDRWDWGGLRDMISKNGVRNSLLVAPMPTAS 625
GS SKGIL D + + S + DW LR + G+RNS ++A PTA+
Sbjct: 684 GSLWSKGILPIDSINLLQQSRNKYLEQDRSQKLDWEPLRVKVRTQGMRNSNVMAIAPTAT 743
Query: 626 TSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSV 685
S I G ++ EP N+Y + LSGEF VVN +L+ DL + LW ++ N + Y +GSV
Sbjct: 744 ISNICGVSQSIEPTYQNLYVKSNLSGEFTVVNPYLVADLKALNLWDEVMVNDLKYFNGSV 803
Query: 686 QKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFH 745
Q I +IP+ELK Y T +EI LV+ A R +ID +QSLNI+M QP+ KL L+ H
Sbjct: 804 QPISRIPDELKRRYATSFEIDPMWLVEAASRRQKWIDQAQSLNIYMAQPSGKKLDQLYMH 863
Query: 746 AWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAKMAQMVCSLTNREECMA 805
AW+RGLKT YYLRS A++A K TV L + + A CS+T+ +C A
Sbjct: 864 AWIRGLKT-TYYLRSLGASNAEKSTVTDGALNAVKLIDTEPKA------CSITD-PDCEA 915
Query: 806 C 806
C
Sbjct: 916 C 916
>gi|388456663|ref|ZP_10138958.1| ribonucleotide-diphosphate reductase subunit alpha [Fluoribacter
dumoffii Tex-KL]
Length = 941
Score = 535 bits (1378), Expect = e-149, Method: Compositional matrix adjust.
Identities = 316/806 (39%), Positives = 438/806 (54%), Gaps = 64/806 (7%)
Query: 31 IEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVV------- 83
+EH V + +Y + + A + P+Y ++AR+++
Sbjct: 169 LEHVQAEPVIKDAMRNLYNQAKFEDVHKALIMAARTLVEKEPNYTYVSARLLLDSLRMEA 228
Query: 84 -SNLHKNTKKSFSETIKDMYNHYNE---RSGLKAPLIADDVYDIIMKNAARLDSEIIYDR 139
S L + +F E + +Y Y + G+K ++ + D ++ +L ++ +R
Sbjct: 229 LSKLEIQSDATFDE-MSALYPSYFKLYIAHGIKQGMLDAKMADFDLE---KLGKALLPER 284
Query: 140 DFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGI---HKDDIDSAIKTYHMMSQR 196
D + Y +TL Y + G E PQ MRVA+G+ KD D AI+ Y ++S
Sbjct: 285 DMKFSYLSLQTLYDRYFIHEHGVRYELPQAFFMRVAMGLALREKDKEDKAIEFYQLLSSF 344
Query: 197 WFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIR 256
+ ++PTLFN+GT R QLSSC+L + D ++GIY +K+ A++SK AGG+G +R
Sbjct: 345 DYMSSTPTLFNSGTIRPQLSSCYLTTVPD-HLDGIYSAIKDNALLSKYAGGLGNDWTPVR 403
Query: 257 ATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRK 316
A GS+I+GTNG S G+VP L V + TA V+QGG KRKGA YLE WH D+ EFL+LRK
Sbjct: 404 AMGSHIKGTNGKSQGVVPFLNVADATAVAVNQGG-KRKGAVCAYLECWHKDVEEFLELRK 462
Query: 317 NHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK 376
N G + R D+ ALW+PDLFM RV+ NG W+LF P+E P L D +G FE LY +YE+
Sbjct: 463 NTGDDRRRTHDMNTALWIPDLFMVRVRENGDWTLFSPDEVPDLHDQYGKAFETLYREYEE 522
Query: 377 EG-----KAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTE 431
+ K K V A LW ++L ETG P+M FKD CN +S QQ+ G + SSNLCTE
Sbjct: 523 KAHQGLIKNAKTVSAVKLWRKMLSMLFETGHPWMTFKDPCNLRSPQQHTGVVHSSNLCTE 582
Query: 432 VIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGI 491
+ TS E AVCNL SI LP ++ K D +KL
Sbjct: 583 ITLNTSEEEIAVCNLGSINLPAHI--------------------KKGKLDTDKLRRTIKT 622
Query: 492 VTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIF 551
L+ +ID+NYY V AR SNL+HRPIG+G+ G D L + + S EA +
Sbjct: 623 AIRMLDNVIDINYYSVPQARNSNLKHRPIGLGLMGFQDALYELKIDYASPEAVEFADSSM 682
Query: 552 ETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGV-----------NPSDRWDW 600
E I Y+A+ S ++A G Y TY GS SKGIL D + + S R DW
Sbjct: 683 ELISYYAIEASCDLAKERGSYSTYEGSLWSKGILPIDSISLLQQARDKYLEQDRSQRLDW 742
Query: 601 GGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHL 660
LR + G+RNS ++A PTA+ S I G ++ EP N+Y + LSGEF VVN +L
Sbjct: 743 ESLRIKVRTQGMRNSNVMAIAPTATISNICGVSQSIEPTYQNLYVKSNLSGEFTVVNPYL 802
Query: 661 LHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCY 720
+ DL + LW ++ N + Y +GSVQ I +IP ELK Y T +EI LVD A R +
Sbjct: 803 VADLKALNLWDEVMVNDLKYFNGSVQPISRIPAELKQRYATSFEIDPIWLVDAASRRQKW 862
Query: 721 IDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
ID +QSLNI+M QP+ KL L+ HAW+RGLKT YYLRS A++A K TV L
Sbjct: 863 IDQAQSLNIYMAQPSGKKLDQLYMHAWMRGLKT-TYYLRSLGASNAEKSTVTDGALNAVK 921
Query: 781 KVTDDDDAKMAQMVCSLTNREECMAC 806
+ D+ VCS+ + +C AC
Sbjct: 922 IILDEPK------VCSILD-PDCEAC 940
>gi|54294661|ref|YP_127076.1| ribonucleotide-diphosphate reductase subunit alpha [Legionella
pneumophila str. Lens]
gi|53754493|emb|CAH15977.1| hypothetical protein lpl1738 [Legionella pneumophila str. Lens]
Length = 942
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 316/837 (37%), Positives = 457/837 (54%), Gaps = 68/837 (8%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
+ + +G+ + + D++ +K+ LS +PV+ + +Y + +
Sbjct: 142 LLITMPNGEVQPLDMDRVNTIVKESCRDLSNVKAEPVI--KDALRNLYNQAKYEDVHKAL 199
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHK--------NTKKSFSE--TIKDMYNHYNERSG 110
+A A+ P+Y ++AR+++ +L ++ +F E I +Y G
Sbjct: 200 IMSARALVEKEPNYTYVSARLLLDSLRSEALTKLNIKSEATFDEMAQIYPVYFKSYIEQG 259
Query: 111 LKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHM 170
+ ++ + D + +L ++ +RD + Y +TL Y + +G E PQ
Sbjct: 260 IAQGMLDPKMTDFDLD---KLSQALLPERDMKFTYLSLQTLYDRYFIHERGVRYELPQAF 316
Query: 171 LMRVAVGI-----HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKD 225
MRVA+G+ HK++ AI+ Y ++S + ++PTLFN+GT R QLSSC+L + D
Sbjct: 317 FMRVAMGLALREQHKEE--KAIEFYQLLSSFDYMSSTPTLFNSGTVRPQLSSCYLTTVPD 374
Query: 226 DSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARY 285
++GIY +K+ A++SK AGG+G +RA G++I+GTNG S G+VP L V + TA
Sbjct: 375 -HLDGIYSAIKDNALLSKYAGGLGNDWTPVRAMGAHIKGTNGKSQGVVPFLNVADATAVA 433
Query: 286 VDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSN 345
V+QGG KRKGA YLE WH D+ EFL+LRKN G + R D+ ALWVPDLFM+RV+ +
Sbjct: 434 VNQGG-KRKGAVCAYLECWHRDVEEFLELRKNTGDDRRRTHDMNTALWVPDLFMKRVRED 492
Query: 346 GLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKA-----KKVVQAQNLWFEILKSQIET 400
G W+LF P+E P L D +G FE LY +YE++ + K + A LW +L ET
Sbjct: 493 GNWTLFSPDEVPDLHDQYGKAFEALYVEYEEKARQGIIRNTKTIPAVKLWRRMLSMLFET 552
Query: 401 GTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGV 460
G P++ FKD CN +S QQ+ G I SSNLCTE+ TS E AVCNL SI LP ++
Sbjct: 553 GHPWLTFKDPCNLRSPQQHAGVIHSSNLCTEITLNTSEEEIAVCNLGSINLPAHI----- 607
Query: 461 PMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPI 520
KN D +KL L+ +ID+NYY V AR SNL+HRPI
Sbjct: 608 ---------------KNGKLDEQKLKRTISTAIRMLDNVIDINYYSVPQARNSNLQHRPI 652
Query: 521 GIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPV 580
G+G+ G D L M + S EA + E I Y+A+ S ++A G Y TY GS
Sbjct: 653 GLGIMGFQDALYELKMDYASKEAIEFADSSMELISYYAIEASCDLAKERGSYSTYEGSLW 712
Query: 581 SKGILQPDMWGV-----------NPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQI 629
SKGIL D + + S + DW LR + G+RNS ++A PTA+ S I
Sbjct: 713 SKGILPIDSINLLQQSRNKYLEQDRSQKLDWEPLRVKVRTQGMRNSNVMAIAPTATISNI 772
Query: 630 LGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIP 689
G ++ EP N+Y + LSGEF VVN +L+ DL + LW ++ N + Y +GSVQ I
Sbjct: 773 CGVSQSIEPTYQNLYVKSNLSGEFTVVNPYLVADLKTLNLWDEVMVNDLKYFNGSVQPIS 832
Query: 690 QIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLR 749
+IPEELK+ Y T +EI LV+ A R +ID +QSLNI+M QP+ KL L+ HAW+R
Sbjct: 833 RIPEELKSRYATSFEIDPMWLVEAASRRQKWIDQAQSLNIYMAQPSGKKLDQLYMHAWIR 892
Query: 750 GLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
GLKT YYLRS A++A K TV L + + A CS+T+ +C AC
Sbjct: 893 GLKT-TYYLRSLGASNAEKSTVTDGALNAVKLIDTEPKA------CSITD-PDCEAC 941
>gi|300309721|ref|YP_003773813.1| ribonucleoside reductase large subunit [Herbaspirillum seropedicae
SmR1]
gi|300072506|gb|ADJ61905.1| ribonucleoside reductase (large chain) oxidoreductase protein
[Herbaspirillum seropedicae SmR1]
Length = 994
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 310/815 (38%), Positives = 450/815 (55%), Gaps = 59/815 (7%)
Query: 4 VKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAET 63
V DG+ + +++ + + GL EH D + + +Y GV +L + A
Sbjct: 158 VTEDGQSRPLDINEVRSLIAAACVGLE-EHVDGEAILAETVKNLYDGVPVEELYKSAILA 216
Query: 64 AAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIK--DMYNHYNE------RSGLKAPL 115
A A+ P Y+ + +R++ +H K+ F + + D Y E + G++A L
Sbjct: 217 ARALMEKDPAYSQVTSRLL---MHTIRKEVFGKEVAQADAPAEYLEYFPQYVKKGIEAEL 273
Query: 116 IADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVA 175
+ + + A+L + + +RD + Y G +TL Y L + G +E PQ MRVA
Sbjct: 274 LDTKLAQF---DLAKLAAALKPERDLQFGYIGLQTLYDRYFLHIGGTRIEMPQAFYMRVA 330
Query: 176 VGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIY 232
+G+ ++ID AI+ Y ++S F ++PTLFN+GT R+QLSSC+L + DD ++GIY
Sbjct: 331 MGLALNEIDRETRAIEFYDLLSSFDFMSSTPTLFNSGTQRSQLSSCYLTTVADD-LDGIY 389
Query: 233 DTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGK 292
+ +KE A+++K AGG+G +RA G++I+GTNG S G+VP L+V NDTA V+QGG K
Sbjct: 390 EAIKENALLAKFAGGLGNDWTPVRALGAHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-K 448
Query: 293 RKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFC 352
RKGA YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV G W+LF
Sbjct: 449 RKGAVCAYLETWHMDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEKGEWTLFS 508
Query: 353 PNEAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQIETGTPYMLF 407
P++ P L D +G FE YT YE E K K VQA +LW ++L ETG P++ F
Sbjct: 509 PSDTPDLHDKFGRAFEEAYTAYEAKAARGELKLFKKVQANDLWRKMLSMLFETGHPWITF 568
Query: 408 KDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPS 467
KD CN +S QQ++G + SSNLCTE+ T+ +E AVCNL S+ LP ++
Sbjct: 569 KDPCNIRSPQQHVGVVHSSNLCTEITLNTNDSEIAVCNLGSVNLPAHL------------ 616
Query: 468 KLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
N D KL + L+ +ID+NYY V+ AR SNLRHRP+G+G+ G
Sbjct: 617 --------VNGELDHAKLQKTIRTAMRMLDNVIDINYYAVKKARDSNLRHRPVGMGIMGF 668
Query: 528 ADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQP 587
D + +P+ S +A + E + Y+A S+E+A G Y +Y GS +GIL
Sbjct: 669 QDCLHIKRVPYASMDAVEFADRSMEAVCYYAYMASTELAEERGRYASYRGSLWDRGILPQ 728
Query: 588 DMWGVNPSDR-----------WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
D + +R DW LR I+++G+RNS VA PTA+ S I+G + C
Sbjct: 729 DSLKLLAQERGGYLETDSTETLDWAALRARIAEHGMRNSNCVAIAPTATISNIIGVSACI 788
Query: 637 EPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELK 696
EP N+Y + LSGEF +N++L+ DL GLW ++ + Y DGS+ KI +IP++L+
Sbjct: 789 EPTYQNLYVKSNLSGEFTEINEYLVRDLKARGLWDEVMVADLKYFDGSLAKIDRIPQDLR 848
Query: 697 AIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMY 756
IY T +E+ LV+ A R +ID +QSLNI+M + +L + AWLRGLKT Y
Sbjct: 849 DIYATAFEVDPSWLVEAASRRQKWIDQAQSLNIYMAGASGKRLDETYKLAWLRGLKT-TY 907
Query: 757 YLRSRAAADAIKFTVDTSVLKENPKVTDDDDAKMA 791
YLR+ A K T L N D MA
Sbjct: 908 YLRTIGATHTEKSTSRAGAL--NAVAVDGGAGAMA 940
>gi|262373380|ref|ZP_06066659.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
junii SH205]
gi|262313405|gb|EEY94490.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
junii SH205]
Length = 944
Score = 535 bits (1377), Expect = e-149, Method: Compositional matrix adjust.
Identities = 316/851 (37%), Positives = 465/851 (54%), Gaps = 74/851 (8%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
+ + +G+ + + D +TA ++ S GL E D + + +Y GV S +
Sbjct: 122 LQITDHNGQLQPLDLDALTATIETASEGL--EGIDVQAIVDETVKNLYNGVKESDIATTM 179
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNE---RSGLKAPLIA 117
P+Y + AR++ + L + + N E + G++ L++
Sbjct: 180 MMATRTRIEQEPNYTYVTARLLCNELVGTGLEFLGLSTDTSENDALEPFLKKGIELDLLS 239
Query: 118 DDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVG 177
D+ + + A+L + I +R + Y G +TL Y + G E PQ MRV++G
Sbjct: 240 PDLLNF---DLAKLSAAIQPERSNQFTYLGLQTLFDRYFIHSNGVRFELPQLFFMRVSMG 296
Query: 178 I---HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
+ ++ + AI+ Y+++S + ++PTLFN+GT R QLSSC+L + DD + IY
Sbjct: 297 LALNEENKEERAIEFYNLLSSFDYMASTPTLFNSGTLRPQLSSCYLTTIGDD-LYDIYGA 355
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+++ A++SK AGG+G +RA SYI+GTNG S G+VP L+V NDTA V+QGG KRK
Sbjct: 356 MRDNAMLSKWAGGLGNDWTPVRALNSYIKGTNGKSQGVVPFLKVANDTAVAVNQGG-KRK 414
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA YLE WH D+ EFL+LRKN G + R D+ A WVPDLFM+RV + W+LF P+
Sbjct: 415 GAVCAYLETWHLDVEEFLELRKNTGDDRRRTHDMNTANWVPDLFMQRVFEDAEWTLFTPS 474
Query: 355 EAPGLADCWGTEFERLYTKYEKEGKAK----KVVQAQNLWFEILKSQIETGTPYMLFKDT 410
E P L D G EF YT YE K + K V+A++LW ++L ETG P++ FKD
Sbjct: 475 ETPDLHDLTGAEFAERYTHYEAVAKEQNMLHKKVRAKDLWRKMLSMLFETGHPWITFKDV 534
Query: 411 CNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLV 470
CN +S QQ++G + SSNLCTE+ TS E AVCNL SI L ++V + GV
Sbjct: 535 CNLRSPQQHVGVVHSSNLCTEITLNTSQDEIAVCNLGSINLVQHV-QGGV---------- 583
Query: 471 GSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADT 530
D EKLA L+ +ID+NYY V A+ SNL+HRP+G+G+ G D
Sbjct: 584 ---------LDREKLARTIKTAVRMLDNVIDINYYAVPQAKNSNLKHRPVGMGIMGFQDA 634
Query: 531 FILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPD-- 588
+G+ + S A + E I Y+A++TSS++A G Y T+ GS +GIL D
Sbjct: 635 LYEMGIAYGSDAAVDFADESMEVISYYAIQTSSDLALERGAYSTFKGSLWDQGILPIDSL 694
Query: 589 ----------MWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
M+ V+ + R DW LR + K+G+RNS ++A PTA+ S I G ++ EP
Sbjct: 695 ELVAKSRPERMFEVDRTQRLDWDSLRAKVQKDGMRNSNVMAIAPTATISNICGVSQSIEP 754
Query: 639 YTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAI 698
N+Y + LSGEF V+N +L+ L E GLW ++ N + + +GSVQKI +IPEELKAI
Sbjct: 755 TFQNLYVKSNLSGEFTVINPYLVRALKERGLWDTVMVNDLKHFEGSVQKIARIPEELKAI 814
Query: 699 YKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYL 758
+ T +E++ + +VD A R +ID +QSLN+++ N KL + AWLRGLKT YYL
Sbjct: 815 FATAFEVETRWIVDAASRRQKWIDQAQSLNLYIAGANGKKLDITYKMAWLRGLKT-TYYL 873
Query: 759 RSRAAADAIKFTVDTSVL-------------------KENPKVTDDDD----AKMAQMVC 795
R+ A A K T++T L ++ P+ ++D A M C
Sbjct: 874 RALGATSAEKSTINTGALNAVKPASVEAPVVAAQAVEEKKPEAQVEEDGFTTAAPVPMAC 933
Query: 796 SLTNREECMAC 806
S+ N +C AC
Sbjct: 934 SIDN-PDCEAC 943
>gi|340789060|ref|YP_004754525.1| ribonucleotide reductase of class Ia (aerobic) subunit alpha
[Collimonas fungivorans Ter331]
gi|340554327|gb|AEK63702.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Collimonas fungivorans Ter331]
Length = 974
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 303/797 (38%), Positives = 446/797 (55%), Gaps = 51/797 (6%)
Query: 4 VKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAET 63
V DG++ + +++ + + GL +H D + + +Y GV +L + A
Sbjct: 155 VTEDGQRRVLDMEQVRSLITAACIGLE-KHVDAEAILAETVKNLYDGVPVEELHKSAILA 213
Query: 64 AAAMTTNHPDYASLAARIVVSNLHKNT--KKSFSETIKDMYNHYNER---SGLKAPLIAD 118
A A+ P Y+++ AR+++ + K K+ + Y Y + G++A L+
Sbjct: 214 ARALMEKDPAYSTVTARLLMHTIRKEVFGKEVAQADAPEAYLEYFPKFIKKGIEADLLDA 273
Query: 119 DVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGI 178
+ +K L + +RD + Y G +TL Y L V+ +E PQ MRVA+G+
Sbjct: 274 KLAQFDLKA---LGEALKPERDLQFGYLGLQTLYDRYFLHVREIRIEMPQAFYMRVAMGL 330
Query: 179 HKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTL 235
++++ AI+ Y+++S F ++PTLFN+GT R+QLSSC+L + DD ++GIY+ +
Sbjct: 331 ALNEVNREARAIEFYNLLSSFDFMSSTPTLFNSGTQRSQLSSCYLTTVADD-LDGIYEAI 389
Query: 236 KECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG 295
KE A+++K AGG+G +R+ G++I+GTNG S G+VP L+V NDTA V+QGG KRKG
Sbjct: 390 KENALLAKYAGGLGNDWTPVRSLGAHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKG 448
Query: 296 AFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNE 355
A YLE WH DI EFLDLRKN G + R D+ A W+PDLFM+RV G W+LF P++
Sbjct: 449 AVCAYLETWHMDIEEFLDLRKNTGDDRRRTHDMNTANWIPDLFMKRVMEKGEWTLFSPSD 508
Query: 356 APGLADCWGTEFERLYTKYEKEG-----KAKKVVQAQNLWFEILKSQIETGTPYMLFKDT 410
AP L D G FE YT YE + K +QA +LW ++L ETG P++ FKD
Sbjct: 509 APDLHDKVGKAFEEAYTGYEARAARGDLRLFKKIQALDLWRKMLSMLFETGHPWITFKDP 568
Query: 411 CNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLV 470
CN +S QQ++G + SSNLCTE+ T+ +E AVCNL S+ LP ++
Sbjct: 569 CNIRSPQQHVGMVHSSNLCTEITLNTNESEIAVCNLGSVNLPAHM--------------- 613
Query: 471 GSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADT 530
K+ D KL + L+ +ID+NYY V+ AR SNLRHRP+G+G+ G D
Sbjct: 614 -----KDGQLDHAKLQKTINTAMRMLDNVIDINYYAVKKARDSNLRHRPVGLGIMGFQDC 668
Query: 531 FILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMW 590
++ +P+ S A + E + YHA S+E+A G Y +Y GS +GIL D
Sbjct: 669 LHMMRVPYASQAAVEFADKSMEAVCYHAYWASTELAEERGRYSSYRGSLWDRGILPQDSL 728
Query: 591 GVNPSDR-----------WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPY 639
+ +R DW LR I + G+RNS VA PTA+ S I+G + C EP
Sbjct: 729 KLLAEERGGYLEADMSASLDWTELRGRIKEFGMRNSNCVAIAPTATISNIIGVSACIEPT 788
Query: 640 TSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIY 699
N+Y + LSGEF +N++L+ DL GLW ++ + + Y DGS+ KI +IP++L+ IY
Sbjct: 789 YQNLYVKSNLSGEFTEINEYLVRDLKARGLWDEVMISDLKYFDGSLAKIDRIPQDLRDIY 848
Query: 700 KTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLR 759
T +E++ LV+ A R +ID +QSLNI+M + KL + AWLRGLKT YYLR
Sbjct: 849 ATAFEVEPSWLVEAASRRQKWIDQAQSLNIYMAGASGKKLDETYKLAWLRGLKT-TYYLR 907
Query: 760 SRAAADAIKFTVDTSVL 776
+ A K T T L
Sbjct: 908 TIGATHTEKSTSKTGAL 924
>gi|410421826|ref|YP_006902275.1| ribonucleoside-diphosphate reductase subunit alpha [Bordetella
bronchiseptica MO149]
gi|427819864|ref|ZP_18986927.1| ribonucleoside-diphosphate reductase alpha chain [Bordetella
bronchiseptica D445]
gi|427825137|ref|ZP_18992199.1| ribonucleoside-diphosphate reductase alpha chain [Bordetella
bronchiseptica Bbr77]
gi|408449121|emb|CCJ60808.1| ribonucleoside-diphosphate reductase alpha chain [Bordetella
bronchiseptica MO149]
gi|410570864|emb|CCN19065.1| ribonucleoside-diphosphate reductase alpha chain [Bordetella
bronchiseptica D445]
gi|410590402|emb|CCN05489.1| ribonucleoside-diphosphate reductase alpha chain [Bordetella
bronchiseptica Bbr77]
Length = 975
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 309/792 (39%), Positives = 447/792 (56%), Gaps = 54/792 (6%)
Query: 7 DGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAA 66
+G + + + A ++ GL+ ++ D + ++ +Y GV ++ + A A A
Sbjct: 158 NGVRRPLDLAALRATIEAAGEGLT-QYTDTEAILKETVKNLYDGVPVDEVFKSAILAARA 216
Query: 67 MTTNHPDYASLAARIVVSNLHKNTKKSFSETIK--DMYNHYNE------RSGLKAPLIAD 118
+ P Y+ + AR++ LH K+ E + DM Y E + G++ L+
Sbjct: 217 LVEKDPAYSQVTARLL---LHTIRKEVLGEEVSQADMATRYAEYFPAFIQRGIEGGLLDA 273
Query: 119 DVYDIIMKNAAR-LDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVG 177
+ + ++ A+ LD RD + Y G +TL Y L V+G +E PQ MRVA+G
Sbjct: 274 KLAEYDLERVAKALDGR----RDLQFGYLGLQTLYDRYFLHVRGTRIELPQVFFMRVAMG 329
Query: 178 IHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
+ + D AI+ Y ++S F ++PTLFN+GT +QLSSC+L + DD +EGIYD
Sbjct: 330 LALREADREARAIEFYEILSSFDFMSSTPTLFNSGTLHSQLSSCYLTTVSDD-LEGIYDA 388
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+KE A+++K AGG+G +RA S+I+GTNG S G+VP L+V NDTA V+QGG KRK
Sbjct: 389 IKENALLAKYAGGLGNDWTPVRALRSHIKGTNGESQGVVPFLKVVNDTAVAVNQGG-KRK 447
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA YLE WH DI EFL+LRKN G E R D+ A W+PDLFM+RV NG W+LF P+
Sbjct: 448 GAVCTYLETWHLDIEEFLELRKNTGDERRRTHDMNTANWIPDLFMKRVMENGEWTLFSPS 507
Query: 355 EAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQIETGTPYMLFKD 409
+ P L D +G FE+ Y YE E K K + A +LW ++L ETG P++ FKD
Sbjct: 508 DCPDLHDKYGKAFEQAYAGYEAKVASGELKLFKKMPAVSLWRKMLSMLFETGHPWITFKD 567
Query: 410 TCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKL 469
CN +S QQ++G + SSNLCTE+ T+ TE AVCNL S+ L +++ P+
Sbjct: 568 PCNIRSPQQHVGVVHSSNLCTEITLNTNATEIAVCNLGSVNLVAHMK---------PNAN 618
Query: 470 VGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
G D +KL G+ L+ +ID+NYY V+ AR SN RHRP+G+G+ G D
Sbjct: 619 GGYE------LDHDKLKRTIGVAMRMLDNVIDINYYAVDKARNSNERHRPVGMGIMGFQD 672
Query: 530 TFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDM 589
++ +P+ S +A E + YHA SSE+A G Y++Y GS S+GIL D
Sbjct: 673 CLHVMRVPYASQDAIDFADRSMEAVCYHAYWASSELAQERGRYQSYEGSLWSRGILPQDT 732
Query: 590 WG-----------VNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
V+ S DW LR I ++G+RNS +A PTA+ S I+G + C EP
Sbjct: 733 LAMLREERGGNVDVDDSSSLDWDTLRSRIKEHGMRNSNCIAIAPTATISNIIGVSACIEP 792
Query: 639 YTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAI 698
N+Y + LSGEF VVN +L+ DL ++GLW ++ + Y DGS+ +I ++P EL+ +
Sbjct: 793 TFQNLYVKSNLSGEFTVVNDYLVRDLKKLGLWDEVMVADLKYFDGSLSRIDRVPSELRKL 852
Query: 699 YKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYL 758
Y T +E++ LV+ A R +ID +QSLNI+M + KL + AW RGLKT YYL
Sbjct: 853 YATAFEVEPSWLVECASRRQKWIDQAQSLNIYMSGASGKKLDDTYKLAWQRGLKT-TYYL 911
Query: 759 RSRAAADAIKFT 770
R+ A A K T
Sbjct: 912 RTLGATSAEKST 923
>gi|397667501|ref|YP_006509038.1| Ribonucleoside-diphosphate reductase alpha subunit (Ribonucleotide
reductase) [Legionella pneumophila subsp. pneumophila]
gi|395130912|emb|CCD09161.1| Ribonucleoside-diphosphate reductase alpha subunit (Ribonucleotide
reductase) [Legionella pneumophila subsp. pneumophila]
Length = 942
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 317/841 (37%), Positives = 460/841 (54%), Gaps = 76/841 (9%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
+ + +G+ + + D++ +K+ LS +PV+ + +Y + +
Sbjct: 142 LLITMPNGEVQPLDMDRVNTIVKESCRNLSNVKAEPVI--KDALRNLYNQAKYEDVHKAL 199
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKN--------TKKSFSETIKDM---YNHYNER- 108
+A A+ P+Y ++AR+++ +L ++ +F E + + Y E+
Sbjct: 200 IMSARALVEKEPNYTYVSARLLLDSLRSEALTKLNIKSEATFDEMAQIYPVYFKSYIEQG 259
Query: 109 --SGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVER 166
G+ P +AD +D+ +L ++ +RD + Y +TL Y + +G E
Sbjct: 260 IAQGMLDPKMAD--FDL-----DKLSQALLPERDMKFTYLSLQTLYDRYFIHERGVRYEL 312
Query: 167 PQHMLMRVAVGI-----HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLV 221
PQ MRVA+G+ HK++ AI+ Y ++S + ++PTLFN+GT R QLSSC+L
Sbjct: 313 PQAFFMRVAMGLALREQHKEE--KAIEFYQLLSSFDYMSSTPTLFNSGTVRPQLSSCYLT 370
Query: 222 CMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFND 281
+ D ++GIY +K+ A++SK AGG+G +RA G++I+GTNG S G+VP L V +
Sbjct: 371 TVPD-HLDGIYSAIKDNALLSKYAGGLGNDWTPVRAMGAHIKGTNGKSQGVVPFLNVADA 429
Query: 282 TARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMER 341
TA V+QGG KRKGA YLE WH D+ EFL+LRKN G + R D+ ALWVPDLFM+R
Sbjct: 430 TAVAVNQGG-KRKGAVCAYLECWHRDVEEFLELRKNTGDDRRRTHDMNTALWVPDLFMKR 488
Query: 342 VQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKA-----KKVVQAQNLWFEILKS 396
V+ +G W+LF P+E P L D +G FE LY +YE++ + K + A LW +L
Sbjct: 489 VREDGNWTLFSPDEVPDLHDQYGKAFEALYVEYEEKARQGIIRNTKTISAVKLWRRMLSM 548
Query: 397 QIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVR 456
ETG P++ FKD CN +S QQ+ G I SSNLCTE+ TS E AVCNL SI LP ++
Sbjct: 549 LFETGHPWLTFKDPCNLRSPQQHAGVIHSSNLCTEITLNTSEEEIAVCNLGSINLPAHI- 607
Query: 457 EMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLR 516
KN D +KL L+ +ID+NYY V AR SNL+
Sbjct: 608 -------------------KNGKLDEQKLKRTISTAVRMLDNVIDINYYSVPQARNSNLQ 648
Query: 517 HRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYH 576
HRP+G+G+ G D L M + S EA + E I Y+A+ S ++A G Y TY
Sbjct: 649 HRPVGLGIMGFQDALYELKMDYASKEAIEFADSSMELISYYAIEASCDLAKERGSYSTYE 708
Query: 577 GSPVSKGILQPDMWGV-----------NPSDRWDWGGLRDMISKNGVRNSLLVAPMPTAS 625
GS SKGIL D + + S + DW LR + G+RNS ++A PTA+
Sbjct: 709 GSLWSKGILPIDSINLLQQSRNKYLEQDRSQKLDWEPLRVKVRTQGMRNSNVMAIAPTAT 768
Query: 626 TSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSV 685
S I G ++ EP N+Y + LSGEF VVN +L+ DL + LW ++ N + Y +GSV
Sbjct: 769 ISNICGVSQSIEPTYQNLYVKSNLSGEFTVVNPYLVADLKALNLWDEVMVNDLKYFNGSV 828
Query: 686 QKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFH 745
Q I +IP+ELK Y T +EI LV+ A R +ID +QSLNI+M QP+ KL L+ H
Sbjct: 829 QPISRIPDELKRRYATSFEIDPMWLVEAASRRQKWIDQAQSLNIYMAQPSGKKLDQLYMH 888
Query: 746 AWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAKMAQMVCSLTNREECMA 805
AW+RGLKT YYLRS A++A K TV L + + A CS+T+ +C A
Sbjct: 889 AWIRGLKT-TYYLRSLGASNAEKSTVTDGALNAVKLIDTEPKA------CSITD-PDCEA 940
Query: 806 C 806
C
Sbjct: 941 C 941
>gi|52842001|ref|YP_095800.1| ribonucleotide-diphosphate reductase subunit alpha [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
gi|296107365|ref|YP_003619065.1| ribonucleoside-diphosphate reductase subunit alpha [Legionella
pneumophila 2300/99 Alcoy]
gi|378777635|ref|YP_005186073.1| ribonucleoside-diphosphate reductase subunit alpha [Legionella
pneumophila subsp. pneumophila ATCC 43290]
gi|52629112|gb|AAU27853.1| ribonucleoside-diphosphate reductase, alpha subunit [Legionella
pneumophila subsp. pneumophila str. Philadelphia 1]
gi|295649266|gb|ADG25113.1| ribonucleoside-diphosphate reductase alpha chain [Legionella
pneumophila 2300/99 Alcoy]
gi|307610474|emb|CBX00046.1| hypothetical protein LPW_18011 [Legionella pneumophila 130b]
gi|364508450|gb|AEW51974.1| ribonucleoside-diphosphate reductase, alpha subunit [Legionella
pneumophila subsp. pneumophila ATCC 43290]
Length = 942
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 318/841 (37%), Positives = 460/841 (54%), Gaps = 76/841 (9%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
+ + +G+ + + D++ +K+ LS +PV+ + +Y + +
Sbjct: 142 LLITMPNGEVQPLDMDRVNTIVKESCRDLSNVKAEPVI--KDALRNLYNQAKYEDVHKAL 199
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHK--------NTKKSFSETIKDM---YNHYNER- 108
+A A+ P+Y ++AR+++ +L ++ +F E + + Y E+
Sbjct: 200 IMSARALVEKEPNYTYVSARLLLDSLRSEALTKLNIKSEATFDEMAQIYPVYFKSYIEQG 259
Query: 109 --SGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVER 166
G+ P +AD +D+ +L ++ +RD + Y +TL Y + +G E
Sbjct: 260 IAQGMLDPKMAD--FDL-----DKLSQALLPERDMKFTYLSLQTLYDRYFIHERGVRYEL 312
Query: 167 PQHMLMRVAVGI-----HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLV 221
PQ MRVA+G+ HK++ AI+ Y ++S + ++PTLFN+GT R QLSSC+L
Sbjct: 313 PQAFFMRVAMGLALREQHKEE--KAIEFYQLLSSFDYMSSTPTLFNSGTVRPQLSSCYLT 370
Query: 222 CMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFND 281
+ D ++GIY +K+ A++SK AGG+G +RA G++I+GTNG S G+VP L V +
Sbjct: 371 TVPD-HLDGIYSAIKDNALLSKYAGGLGNDWTPVRAMGAHIKGTNGKSQGVVPFLNVADA 429
Query: 282 TARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMER 341
TA V+QGG KRKGA YLE WH D+ EFL+LRKN G + R D+ ALWVPDLFM+R
Sbjct: 430 TAVAVNQGG-KRKGAVCAYLECWHRDVEEFLELRKNTGDDRRRTHDMNTALWVPDLFMKR 488
Query: 342 VQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKA-----KKVVQAQNLWFEILKS 396
V+ +G W+LF P+E P L D +G FE LY +YE++ + K + A LW +L
Sbjct: 489 VREDGNWTLFSPDEVPDLHDQYGKAFEALYVEYEEKARQGIIRNTKTISAVKLWRRMLSM 548
Query: 397 QIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVR 456
ETG P++ FKD CN +S QQ+ G I SSNLCTE+ TS E AVCNL SI LP ++
Sbjct: 549 LFETGHPWLTFKDPCNLRSPQQHAGVIHSSNLCTEITLNTSEEEIAVCNLGSINLPAHI- 607
Query: 457 EMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLR 516
KN D +KL L+ +ID+NYY V AR SNL+
Sbjct: 608 -------------------KNGKLDEQKLKRTISTAVRMLDNVIDINYYSVPQARNSNLQ 648
Query: 517 HRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYH 576
HRPIG+G+ G D L M + S EA + E I Y+A+ S ++A G Y TY
Sbjct: 649 HRPIGLGIMGFQDALYELKMDYASKEAIEFADSSMELISYYAIEASCDLAKERGSYSTYE 708
Query: 577 GSPVSKGILQPDMWGV-----------NPSDRWDWGGLRDMISKNGVRNSLLVAPMPTAS 625
GS SKGIL D + + S + DW LR + G+RNS ++A PTA+
Sbjct: 709 GSLWSKGILPIDSINLLQQSRNKYLEQDRSQKLDWEPLRVKVRTQGMRNSNVMAIAPTAT 768
Query: 626 TSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSV 685
S I G ++ EP N+Y + LSGEF VVN +L+ DL + LW ++ N + Y +GSV
Sbjct: 769 ISNICGVSQSIEPTYQNLYVKSNLSGEFTVVNPYLVADLKALNLWDEVMVNDLKYFNGSV 828
Query: 686 QKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFH 745
Q I +IP+ELK Y T +EI LV+ A R +ID +QSLNI+M QP+ KL L+ H
Sbjct: 829 QPISRIPDELKRRYATSFEIDPMWLVEAASRRQKWIDQAQSLNIYMAQPSGKKLDQLYMH 888
Query: 746 AWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAKMAQMVCSLTNREECMA 805
AW+RGLKT YYLRS A++A K TV L + + A CS+T+ +C A
Sbjct: 889 AWIRGLKT-TYYLRSLGASNAEKSTVTDGALNAVKLIDTEPKA------CSITD-PDCEA 940
Query: 806 C 806
C
Sbjct: 941 C 941
>gi|456062541|ref|YP_007501511.1| ribonucleoside-diphosphate reductase, alpha subunit [beta
proteobacterium CB]
gi|455439838|gb|AGG32776.1| ribonucleoside-diphosphate reductase, alpha subunit [beta
proteobacterium CB]
Length = 988
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 305/794 (38%), Positives = 448/794 (56%), Gaps = 55/794 (6%)
Query: 47 VYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNT--KKSFSETIKDMYNH 104
+Y GV +Q+ + A + + P Y+ + ARI++ + K ++ ++ Y+
Sbjct: 215 LYDGVPMAQVYDSAILASRTLIEKDPAYSQVTARILMHVIRKEILGREVLQGDMQAEYST 274
Query: 105 YNER---SGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQG 161
Y + G+ A L+ + + + RL + + RD ++Y G +TL Y L ++
Sbjct: 275 YFAKYINEGISAELLDPRMREF---DLPRLAAALNASRDLQFNYLGLQTLYDRYFLHIED 331
Query: 162 KVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSC 218
+ +E PQ MRVA+G+ +++D AI+ Y ++S F ++PTLFN+ T R QLSSC
Sbjct: 332 RRIEMPQAFFMRVAMGLSLNELDRERRAIEFYEILSTFDFMSSTPTLFNSATTRPQLSSC 391
Query: 219 FLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRV 278
+L + DD ++GIY+ LKE A++SK AGG+G N+RA GS+I+GTNG S G+VP L+V
Sbjct: 392 YLTTV-DDDLDGIYEALKENALLSKFAGGLGNDWTNVRALGSHIKGTNGKSQGVVPFLKV 450
Query: 279 FNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLF 338
NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R D+ + W+PDLF
Sbjct: 451 VNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTSNWIPDLF 509
Query: 339 MERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAKKV-----VQAQNLWFEI 393
M+RV G W+LF P+ P L D +G FE Y YEK+ A ++ + AQ LW ++
Sbjct: 510 MKRVMEGGEWTLFSPSNTPDLHDKFGKAFEEAYVAYEKKADAGELKPFRRIPAQQLWRKM 569
Query: 394 LKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPR 453
L ETG P++ FKD CN +S QQ++G + SSNLCTE+ T+ +E AVCNL S+ L
Sbjct: 570 LGMLFETGHPWITFKDPCNIRSPQQHIGVVHSSNLCTEITLNTNESEIAVCNLGSVNLTA 629
Query: 454 YVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRS 513
++ + S D EKL + L+ +ID+NYY V AR S
Sbjct: 630 HMT---------------TDASGKMILDHEKLQKTIRTAMRMLDNVIDINYYAVAKARNS 674
Query: 514 NLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYE 573
NL+HRP+G+G+ G D + +P+ S EA + E + Y+A + S+E+A G Y
Sbjct: 675 NLKHRPVGMGIMGFQDCLHMQRIPYASDEAVKFADSSMEAVCYYAYQASNELAEERGVYS 734
Query: 574 TYHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRDMISKNGVRNSLLVAPMP 622
TY GS +GIL D V+ S +W GLR I + G+RNS VA P
Sbjct: 735 TYKGSLWDRGILPQDSVALLAAERGGYLEVDSSSTMNWDGLRARIKQFGMRNSNCVAIAP 794
Query: 623 TASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDD 682
TA+ S I+G + C EP N++ + LSGEF VVN++L+ DL + GLW ++ + Y D
Sbjct: 795 TATISNIIGVSACIEPTFQNLFVKSNLSGEFTVVNEYLVRDLKDRGLWDEVMIADLKYFD 854
Query: 683 GSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSL 742
G++ KI ++P++L+ +Y T +E++ LV+ A R +ID +QSLNI+M + KL
Sbjct: 855 GTLSKIDRVPQDLRDLYATAFEVEPSWLVEAASRRQKWIDQAQSLNIYMGGASGKKLDDT 914
Query: 743 HFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLK--ENPKVTDDDDAKMAQMV----CS 796
+ AWLRGLKT YYLR+ AA K TV + L + + DA AQ + C+
Sbjct: 915 YKLAWLRGLKT-TYYLRTMAATHVEKSTVASGQLNAVSSGGGVNGTDASAAQELDGPACT 973
Query: 797 L----TNREECMAC 806
+ EEC AC
Sbjct: 974 MRPGDAGFEECEAC 987
>gi|335042801|ref|ZP_08535828.1| ribonucleotide reductase, alpha subunit [Methylophaga
aminisulfidivorans MP]
gi|333789415|gb|EGL55297.1| ribonucleotide reductase, alpha subunit [Methylophaga
aminisulfidivorans MP]
Length = 1009
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 302/812 (37%), Positives = 460/812 (56%), Gaps = 61/812 (7%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
++V+ DG + + D++ + + GL+ + D +L + ++ GV + +++
Sbjct: 177 LHVIAADGSRHPLDIDRLHNLITEACEGLAEVNRDAIL--RDTQRNLFDGVKEADVEKAL 234
Query: 61 AETAAAMTTNHPDYASLAARIV--------VSNLHKNTKKSFSETIKDMYNHYNE---RS 109
+A P Y++LAAR++ +S ++K K++ + D+Y Y + +
Sbjct: 235 VMSARTFIEKDPAYSTLAARLLMDGIRREALSFVYKTPKQASQNEMGDLYADYFKTYIST 294
Query: 110 GLKAPLIADDV--YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERP 167
++ LI ++ +D+ RL + + + DF++ Y G +TL Y + G E P
Sbjct: 295 AIEKELIDSELGLFDL-----DRLGNALKPELDFEFTYLGLQTLYDRYFIHFDGTRFELP 349
Query: 168 QHMLMRVAVGIHKDDI---DSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMK 224
Q MRVA+G+ +++ + AI+ Y+++S F ++PTLFN+GT R QLSSC+L +
Sbjct: 350 QAFYMRVAMGLAINELNREERAIEFYNLLSSFDFMSSTPTLFNSGTLRPQLSSCYLTTVP 409
Query: 225 DDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTAR 284
DD + GIY+ +++ A++SK AGG+G +R G++I+GTNG S G+VP L+V NDTA
Sbjct: 410 DD-LSGIYNAMRDNALLSKYAGGLGNDWTRVRGLGAHIKGTNGKSQGVVPFLKVANDTAV 468
Query: 285 YVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQS 344
V+QGG KRKGA YLE WH D+ EFLDLRKN G + R D+ A W+PDLFM+RV
Sbjct: 469 AVNQGG-KRKGAVCAYLETWHIDVEEFLDLRKNTGDDRRRTHDMNTANWIPDLFMKRVAE 527
Query: 345 NGLWSLFCPNEAPGLADCWGTEFERLYTKYEKEG-----KAKKVVQAQNLWFEILKSQIE 399
G W+LF P E L D G +FER Y YE++ + K + A +LW ++L E
Sbjct: 528 EGQWTLFSPEEVEDLHDLTGLDFERAYEAYEEKAARGDIRNFKQLPATDLWRKMLGMLFE 587
Query: 400 TGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMG 459
TG P++ FKD CN +S QQ++G + SSNLCTE+ TS E AVCNL S+ + +++ E G
Sbjct: 588 TGHPWITFKDPCNLRSPQQHVGVVHSSNLCTEITLNTSDKEIAVCNLGSVNMVKHIDENG 647
Query: 460 VPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRP 519
D EKL + L+ +I+ NYY V AR SNL+HRP
Sbjct: 648 -------------------KLDKEKLQKTVRTAMRMLDNVIEYNYYSVPQARHSNLQHRP 688
Query: 520 IGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSP 579
+G+G+ G D L +P+ S EA Q + E I Y+A+ SS++AA G Y+TY GS
Sbjct: 689 VGLGLMGFQDALYKLRIPYSSDEAVQFADESMEAISYYAIEASSDLAAERGKYQTYEGSL 748
Query: 580 VSKGILQPDMWGV-----------NPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQ 628
SKGIL D + + S DW LRD I + G+RNS +A PTA+ S
Sbjct: 749 WSKGILPIDSIKLLKEARGEYLQQDESKTMDWDMLRDKIKRQGMRNSNTMAIAPTATISN 808
Query: 629 ILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKI 688
I G ++ EP N++ + LSGEF V+N +++ DL LW ++ N + Y DGS+Q I
Sbjct: 809 ICGVSQSIEPTYQNLFVKSNLSGEFTVINPYMVEDLKARNLWDDVMINDLKYFDGSLQGI 868
Query: 689 PQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWL 748
+IP ELK++Y T +E+ + L++ A R ++D +QSLN++M +P+ K+ +L+ AW+
Sbjct: 869 DRIPAELKSLYTTAFEMDARWLIEAASRRQKWLDQAQSLNLYMAEPSGKKMDNLYKLAWV 928
Query: 749 RGLKTGMYYLRSRAAADAIKFTVDTSVLKENP 780
RGLKT YYLRS A A K + + E P
Sbjct: 929 RGLKT-TYYLRSMGATGAEKTSTAPTTATEAP 959
>gi|392950909|ref|ZP_10316464.1| ribonucleoside-diphosphate reductase, subunit alpha
[Hydrocarboniphaga effusa AP103]
gi|391859871|gb|EIT70399.1| ribonucleoside-diphosphate reductase, subunit alpha
[Hydrocarboniphaga effusa AP103]
Length = 954
Score = 534 bits (1376), Expect = e-149, Method: Compositional matrix adjust.
Identities = 314/806 (38%), Positives = 445/806 (55%), Gaps = 61/806 (7%)
Query: 7 DGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAA 66
DG A+ +I + + + GL+ + V+ S +Y G+ ++L + A A
Sbjct: 129 DGSLHALDVARIQRVVTEAADGLTGISVEEVVSS--ALRDLYDGIPEAELSQAVTLAARA 186
Query: 67 MTTNHPDYASLAARIVVSNLH---------KNTKKSFSETIKDMYNHYNERSGLKAPLIA 117
P+Y ++AR+++ L T+ +F E +K +Y Y +A I
Sbjct: 187 RIEKEPNYTYVSARLLMDGLRHEALKFLRMSETRPTFEE-MKAIYPDYFREYIHRA--IE 243
Query: 118 DDVYD--IIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVA 175
++ D + + + L ++ DRD +DY G +TL Y + E PQ MRVA
Sbjct: 244 LELLDPKLALFDLDTLGKALLADRDAKFDYLGLQTLYDRYFIHSNKTRFELPQAFFMRVA 303
Query: 176 VGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIY 232
+G+ ++ID AI+ Y ++S F ++PTLFN+GTPR QLSSC+L + DD + GI+
Sbjct: 304 MGLAMNEIDRETRAIEFYTLLSSFDFMSSTPTLFNSGTPRPQLSSCYLTQVPDD-LHGIF 362
Query: 233 DTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGK 292
+ + A++SK AGG+G +R G +I+GTNG SNG+VP L+V NDT V+QGG K
Sbjct: 363 GAIHDNAMLSKFAGGLGNDWTPVRGMGGWIKGTNGKSNGVVPFLKVANDTCVAVNQGG-K 421
Query: 293 RKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFC 352
RKGA YLE WH DI EFL+LRKN G + R D+ A WVPDLFM+RV +G W+LF
Sbjct: 422 RKGALCAYLETWHRDIEEFLELRKNTGDDRRRTHDMNTANWVPDLFMKRVMEDGPWTLFS 481
Query: 353 PNEAPGLADCWGTEFERLYTKYEK---EGKAK--KVVQAQNLWFEILKSQIETGTPYMLF 407
P+E P L + G FE+ Y +YEK EG+ K K +QA LW ++L ETG P++ F
Sbjct: 482 PDETPDLHELVGEAFEKKYVEYEKLAEEGRLKNTKRIQALGLWRKMLSMLFETGHPWITF 541
Query: 408 KDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPT-ETAVCNLASIALPRYVREMGVPMESHP 466
KD CN +S QQ++G + SSNLCTE+ T E AVCNL S+ LP ++ G
Sbjct: 542 KDPCNLRSPQQHVGVVHSSNLCTEITLNTKANQEIAVCNLGSVNLPAHITAEG------- 594
Query: 467 SKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQG 526
D KL L+ +I+ NYY V TAR SNLRHRP+G+GV G
Sbjct: 595 ------------KLDKAKLERTITTAMRMLDNVIEYNYYSVPTARNSNLRHRPVGLGVMG 642
Query: 527 LADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQ 586
D L +P++S A E I Y+AL+ S+++A G Y ++ GS +GIL
Sbjct: 643 FNDALYKLRLPYESDRAISFADYSMEAISYYALKASADLAIERGAYSSFKGSLWDQGILP 702
Query: 587 PD--------------MWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGN 632
D S +DW LR I +G+RNS +A PTA+ + I G
Sbjct: 703 IDSIRLVAEARGDRYLQQDTQASGAFDWDSLRTQIKTSGIRNSNTMAIAPTATIANITGV 762
Query: 633 NECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIP 692
++ EP N+Y + LSGEF VVN++L++DL + LW ++ + + Y DGSVQKI ++P
Sbjct: 763 SQSIEPTYQNLYVKSNLSGEFTVVNEYLVNDLKALDLWDEVMAHDLKYYDGSVQKIDRVP 822
Query: 693 EELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLK 752
EELKAIYK +EI K LVD R +ID +QSLN++M QP+ KL L+ HAWL GLK
Sbjct: 823 EELKAIYKCAFEIDPKRLVDAGSRRQKWIDQAQSLNLYMAQPSGKKLDELYKHAWLSGLK 882
Query: 753 TGMYYLRSRAAADAIKFTVDTSVLKE 778
T YYLR+ A K T+ + L +
Sbjct: 883 T-TYYLRTMGATHTEKTTITDTRLNK 907
>gi|397664228|ref|YP_006505766.1| Ribonucleoside-diphosphate reductase alpha subunit (Ribonucleotide
reductase) [Legionella pneumophila subsp. pneumophila]
gi|395127639|emb|CCD05838.1| Ribonucleoside-diphosphate reductase alpha subunit (Ribonucleotide
reductase) [Legionella pneumophila subsp. pneumophila]
Length = 942
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 316/837 (37%), Positives = 456/837 (54%), Gaps = 68/837 (8%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
+ + +G+ + + D++ +K+ LS +PV+ + +Y + +
Sbjct: 142 LLITMPNGEVQPLDMDRVNTIVKESCRDLSNVKAEPVI--KDALRNLYNQAKYEDVHKAL 199
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHK--------NTKKSFSE--TIKDMYNHYNERSG 110
+A A+ P+Y ++AR+++ +L ++ +F E I +Y G
Sbjct: 200 IMSARALVEKEPNYTYVSARLLLDSLRSEALTKLNIKSEATFDEMAQIYPVYFKSYIEQG 259
Query: 111 LKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHM 170
+ ++ + D + +L ++ +RD + Y +TL Y + +G E PQ
Sbjct: 260 IAQGMLDPKMTDFDLD---KLSQALLPERDMKFTYLSLQTLYDRYFIHERGVRYELPQAF 316
Query: 171 LMRVAVGI-----HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKD 225
MRVA+G+ HK++ AI+ Y ++S + ++PTLFN+GT R QLSSC+L + D
Sbjct: 317 FMRVAMGLALREQHKEE--KAIEFYQLLSSFDYMSSTPTLFNSGTVRPQLSSCYLTTVPD 374
Query: 226 DSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARY 285
++GIY +K+ A++SK AGG+G +RA G++I+GTNG S G+VP L V + TA
Sbjct: 375 -HLDGIYSAIKDNALLSKYAGGLGNDWTPVRAMGAHIKGTNGKSQGVVPFLNVADATAVA 433
Query: 286 VDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSN 345
V+QGG KRKGA YLE WH D+ EFL+LRKN G + R D+ ALWVPDLFM+RV+ +
Sbjct: 434 VNQGG-KRKGAVCAYLECWHRDVEEFLELRKNTGDDRRRTHDMNTALWVPDLFMKRVRED 492
Query: 346 GLWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKA-----KKVVQAQNLWFEILKSQIET 400
G W+LF P+E P L D +G FE LY +YE++ + K + A LW +L ET
Sbjct: 493 GNWTLFSPDEVPDLHDQYGKAFEALYVEYEEKARQGIIRNTKTISAVKLWRRMLSMLFET 552
Query: 401 GTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGV 460
G P++ FKD CN +S QQ+ G I SSNLCTE+ TS E AVCNL SI LP ++
Sbjct: 553 GHPWLTFKDPCNLRSPQQHAGVIHSSNLCTEITLNTSEEEIAVCNLGSINLPAHI----- 607
Query: 461 PMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPI 520
KN D +KL L+ +ID+NYY V AR SNL+HRPI
Sbjct: 608 ---------------KNGKLDEQKLKRTISTAVRMLDNVIDINYYSVPQARNSNLQHRPI 652
Query: 521 GIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPV 580
G+G+ G D L M + S EA + E I Y+A+ S ++A G Y TY GS
Sbjct: 653 GLGIMGFQDALYELKMDYASKEAIEFADSSMELISYYAIEASCDLAKERGSYSTYEGSLW 712
Query: 581 SKGILQPDMWGV-----------NPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQI 629
SKGIL D + + S + DW LR + G+RNS ++A PTA+ S I
Sbjct: 713 SKGILPIDSINLLQQSRNKYLEQDRSQKLDWEPLRVKVRTQGMRNSNVMAIAPTATISNI 772
Query: 630 LGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIP 689
G ++ EP N+Y + LSGEF VVN +L+ DL + LW ++ N + Y +GSVQ I
Sbjct: 773 CGVSQSIEPTYQNLYVKSNLSGEFTVVNPYLVADLKTLNLWDEVMVNDLKYFNGSVQPIS 832
Query: 690 QIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLR 749
+IPEELK Y T +EI LV+ A R +ID +QSLNI+M QP+ KL L+ HAW+R
Sbjct: 833 RIPEELKRRYATSFEIDPMWLVEAASRRQKWIDQAQSLNIYMAQPSGKKLDQLYMHAWIR 892
Query: 750 GLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
GLKT YYLRS A++A K TV L + + A CS+T+ +C AC
Sbjct: 893 GLKT-TYYLRSLGASNAEKSTVTDGALNAVKLIDTEPKA------CSITD-PDCEAC 941
>gi|421809628|ref|ZP_16245461.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC035]
gi|410413988|gb|EKP65795.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC035]
Length = 943
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 316/851 (37%), Positives = 464/851 (54%), Gaps = 75/851 (8%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
+ V +G+ + + + A + + + GL E D + + +Y GV S +
Sbjct: 122 LQVTDANGQLQPLDLSALQATVNRAAEGL--EGIDVQAIIDETVKNLYNGVKESDIATTM 179
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSF----SETIKDMYNHYNERSGLKAPLI 116
P+Y + AR++ L +T +F ++T ++ + G++ L+
Sbjct: 180 MMATRTRIEQEPNYTYVTARLLRDEL-VSTGLAFLGLPADTAENNALEAFLKKGVELDLL 238
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAV 176
+ D+ ++ +L + I +R + Y G +TL Y + G E PQ MRV++
Sbjct: 239 SPDLLKFDLE---KLAAAIQPERSNQFTYLGLQTLFDRYFIHSNGVRFELPQLFFMRVSM 295
Query: 177 GI---HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYD 233
G+ +D + AI+ Y+++S + ++PTLFN+GT R QLSSC+L + DD + IY
Sbjct: 296 GLALNEQDKEERAIEFYNLLSSFDYMASTPTLFNSGTLRPQLSSCYLTTIGDD-LYDIYG 354
Query: 234 TLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKR 293
+++ A++SK AGG+G +RA SYI+GTNG S G+VP L+V NDTA V+QGG KR
Sbjct: 355 AMRDNAMLSKWAGGLGNDWTPVRALNSYIKGTNGKSQGVVPFLKVANDTAVAVNQGG-KR 413
Query: 294 KGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCP 353
KGA YLE WH DI EFL+LRKN G + R D+ A WVPDLFM+RV +G W+LF P
Sbjct: 414 KGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWVPDLFMQRVFEDGEWTLFTP 473
Query: 354 NEAPGLADCWGTEFERLYTKYEKEGKAK----KVVQAQNLWFEILKSQIETGTPYMLFKD 409
+E P L D G EF Y YE K + K V+A++LW ++L ETG P++ FKD
Sbjct: 474 SETPDLHDLTGAEFAERYAYYESVAKEQNMLHKKVRAKDLWRKMLSMLFETGHPWITFKD 533
Query: 410 TCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKL 469
CN +S QQ++G + SSNLCTE+ T+ E AVCNL SI L ++V
Sbjct: 534 VCNLRSPQQHVGVVHSSNLCTEITLNTNQDEIAVCNLGSINLVQHV-------------- 579
Query: 470 VGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
K D EKLA L+ +ID+NYY V A+ SNL+HRP+G+G+ G D
Sbjct: 580 ------KGGVLDREKLARTVKTAVRMLDNVIDINYYAVPQAKNSNLKHRPVGMGIMGFQD 633
Query: 530 TFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPD- 588
+GM + S EA + E I Y+A++TSS++A G Y T+ GS +GIL D
Sbjct: 634 ALYEMGMAYGSDEAVNFADESMEVISYYAIQTSSDLAVERGAYSTFKGSLWDQGILPIDS 693
Query: 589 -----------MWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFE 637
M+ V+ + R DW LR + K+G+RNS ++A PTA+ S I G ++ E
Sbjct: 694 LEIVAKSRPERMFEVDRTQRLDWDSLRAKVQKDGMRNSNVMAIAPTATISNICGVSQSIE 753
Query: 638 PYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKA 697
P N+Y + LSGEF V+N +L+ L E GLW ++ N + + +GSVQKI +IPEELKA
Sbjct: 754 PTFQNLYVKSNLSGEFTVINPYLVRALKERGLWDTVMVNDLKHFEGSVQKIARIPEELKA 813
Query: 698 IYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYY 757
I+ T +E++ + +VD A R +ID +QSLN+++ N KL + AWLRGLKT YY
Sbjct: 814 IFATAFEVEPRWIVDAASRRQKWIDQAQSLNLYISGANGKKLDITYKMAWLRGLKT-TYY 872
Query: 758 LRSRAAADAIKFTVDTSVLK-------------------ENPKVTDDD---DAKMAQMVC 795
LR+ A A K T++T L + P+ ++D A M C
Sbjct: 873 LRALGATSAEKSTINTGALNAVKPATVEAAPAAAPVVEAKKPEAVEEDGFTQAAPVPMAC 932
Query: 796 SLTNREECMAC 806
S+ N +C AC
Sbjct: 933 SIDN-PDCEAC 942
>gi|431805705|ref|YP_007232606.1| ribonucleotide reductase subunit alpha [Liberibacter crescens BT-1]
gi|430799680|gb|AGA64351.1| Ribonucleotide reductase of class Ia (aerobic), alpha subunit
[Liberibacter crescens BT-1]
Length = 953
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 300/768 (39%), Positives = 446/768 (58%), Gaps = 59/768 (7%)
Query: 36 PVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNL--------- 86
P ++ ++ +Y G++ ++L+ + A + P+Y ++AR+++ L
Sbjct: 183 PAVILSEIKRNLYDGLSEAELELASILAARTLIETDPEYTKVSARLLLDKLRLEVLTFIY 242
Query: 87 ---HKNTKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKN-AARLDSEIIYDRDFD 142
K T+ +E D +++Y + G+ A L+ + + + AA L E RD
Sbjct: 243 KKPQKATQAKMTEYYADYFHNY-IKVGIDAELLNPSLSSFDLDSLAASLKPE----RDLS 297
Query: 143 YDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFT 199
++Y G +TL YLL V G E PQ MRVA+G+ ++ + AI+ Y ++S F
Sbjct: 298 FEYLGLQTLYDRYLLHVDGIHFEMPQAFFMRVAMGLALNEDNQEKRAIEFYDLLSSFSFM 357
Query: 200 HASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATG 259
++PTLFN+GT R QLSSCFL DD ++GI+ ++K+ A+++K +GGIG +R G
Sbjct: 358 CSTPTLFNSGTLRPQLSSCFLTTFPDD-LDGIFKSIKDNALLAKYSGGIGNDWTRVRGLG 416
Query: 260 SYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHG 319
++IRGTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFLDLRKN G
Sbjct: 417 AHIRGTNGKSQGLVPFLKVTNDTAVAVNQGG-KRKGAVCAYLETWHIDIEEFLDLRKNTG 475
Query: 320 KEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK--- 376
+ R D+ A W+PDLFM+RV++N +W+LF P+E P L + +G FE Y YE+
Sbjct: 476 DDRRRTHDMNTANWIPDLFMKRVENNDVWTLFSPDETPDLHELYGRSFENAYKAYEEKAL 535
Query: 377 EGKAK--KVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQ 434
+GK K K VQA NLW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+
Sbjct: 536 QGKIKIFKQVQAVNLWRKMLTMLFETGHPWITFKDPCNIRSPQQHIGVVHSSNLCTEITL 595
Query: 435 YTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTE 494
TS E AVCNL SI L + L+ + D++KLA+
Sbjct: 596 NTSDDEVAVCNLGSINLAAH--------------LLSDK------LDYDKLAKTIYTAMR 635
Query: 495 NLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETI 554
L+ +ID+N+Y ++ A+ SNL+HRPIG+G+ G D L +P+ S +A L+ + E I
Sbjct: 636 MLDNVIDINFYTIKEAQNSNLKHRPIGMGIMGFQDVLHALRIPYASNKAIDLSDESMEYI 695
Query: 555 YYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMW----------GVNPSDRWDWGGLR 604
+HA+ S ++A GPY ++ GS SKGIL D V+ S + DW LR
Sbjct: 696 SFHAISASVDLALERGPYASFQGSLWSKGILPIDSLHLLKDNRGELNVDFSSKLDWSILR 755
Query: 605 DMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDL 664
D + G+RNS +A PTA+ S I G ++ EP N++ + +SG+F +VN L+ DL
Sbjct: 756 DRVKSIGIRNSNCMAIAPTATISNICGVSQSIEPAYQNLFVKSNMSGDFTIVNASLVRDL 815
Query: 665 TEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHS 724
E GLW ++ + Y DGS+ KI +IP++LK +Y T +EI+ L++ A R +ID +
Sbjct: 816 KERGLWDTVMVFDLKYYDGSIGKIDRIPDDLKDLYATAFEIEPIWLIEAAARRQKWIDQA 875
Query: 725 QSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD 772
QSLNI++ P+ KL ++ AW +GLKT YYLRS +A K T++
Sbjct: 876 QSLNIYLSNPSGKKLDFIYRKAWEKGLKT-TYYLRSSSATHVEKSTLN 922
>gi|121606274|ref|YP_983603.1| ribonucleotide-diphosphate reductase subunit alpha [Polaromonas
naphthalenivorans CJ2]
gi|120595243|gb|ABM38682.1| ribonucleoside-diphosphate reductase, alpha subunit [Polaromonas
naphthalenivorans CJ2]
Length = 967
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 306/789 (38%), Positives = 446/789 (56%), Gaps = 53/789 (6%)
Query: 8 GKQEAVHFDKITARLKKLSYGLSIE-HCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAA 66
GK+ A+ + A ++ L + DP++ + +Y GV ++ + + A
Sbjct: 152 GKRVALDLRNLQALIEASCANLGTDVKPDPIV--SETMRNLYDGVPIEEVYKASILAART 209
Query: 67 MTTNHPDYASLAARIVVSNLHKNT--KKSFSETIKDMYNHYNER---SGLKAPLIADDVY 121
+ PDY AR+++ + K ++ E + Y Y G+K L+ + +
Sbjct: 210 LIEKDPDYTYATARLLLHTIRKEVLDEEISHEAMAVRYVTYFPEFIAKGIKNELLDEKLQ 269
Query: 122 DIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKD 181
+ ARL + + +RD +DY G +TL Y L ++ + +E PQ MRVA+G+ +
Sbjct: 270 QF---DLARLGAALKPERDLQFDYLGLQTLFDRYFLHIRKQRIELPQAFFMRVAMGLSLN 326
Query: 182 DIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKEC 238
+ D AI+ Y ++S F ++PTLFNAGT R+QLSSC+L + DD + GIYD +KE
Sbjct: 327 ETDREARAIEFYEILSSFDFMSSTPTLFNAGTLRSQLSSCYLTTVADD-LGGIYDAIKEN 385
Query: 239 AIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFA 298
A++SK AGG+G +RA G++I+GTNG S G+VP L+V NDTA V+QGG KRKGA
Sbjct: 386 ALLSKFAGGLGNDWTPVRAMGAHIKGTNGESQGVVPFLKVVNDTAVAVNQGG-KRKGAVC 444
Query: 299 VYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPG 358
YLE WH DI EFL+LRKN G + R D+ + W+PDLFM RV G W+LF P++ P
Sbjct: 445 AYLETWHLDIEEFLELRKNTGDDRRRTHDMNTSNWIPDLFMRRVMEKGSWTLFSPSDTPD 504
Query: 359 LADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNK 413
L D +G +FE+ Y YE E K + +QA ++W ++L ETG P++ FKD CN
Sbjct: 505 LHDKFGQDFEKAYVAYEARAERGELKPSRKLQATDMWRKMLSMLFETGHPWITFKDACNI 564
Query: 414 KSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSR 473
+S QQ+ G + SSNLCTE+ TS TETAVCNL SI L +++
Sbjct: 565 RSPQQHAGVVHSSNLCTEITLNTSATETAVCNLGSINLVQHL------------------ 606
Query: 474 GSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFIL 533
K+ D +KL + L+ +ID+NYY VE AR SN+RHRP+G+G+ G D
Sbjct: 607 --KDGALDHDKLKKTITTAMRMLDNVIDINYYAVEKARHSNMRHRPVGLGLMGFQDCLYE 664
Query: 534 LGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWG-- 591
L +P+ S A + E I YHA S+E+A G YE+Y GS +GIL D
Sbjct: 665 LRVPYASQAAVEFADTSMEAICYHAYWASTELARERGQYESYKGSLWDQGILPLDTLDML 724
Query: 592 ---------VNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSN 642
V+ S DW LR I+ +G+RNS VA PTA+ S I+G + C EP N
Sbjct: 725 AKERGGYVEVDRSATLDWDALRQKIATDGMRNSNCVAIAPTATISNIIGVDACIEPCFGN 784
Query: 643 IYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTV 702
+ + LSGEF V+N +L+ DL ++GLW ++ + + DGS++ I ++P ++KA+Y T
Sbjct: 785 LSVKSNLSGEFTVINHYLVRDLKKLGLWDDVMVVDLKHFDGSLRPIDRVPNDIKALYATA 844
Query: 703 WEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRA 762
+EI+ LV+ R +ID +QSLNI+M + KL + AW+RGLKT YYLR+++
Sbjct: 845 FEIETSWLVEAGSRRQKWIDQAQSLNIYMAGASGKKLDETYKLAWVRGLKT-TYYLRTQS 903
Query: 763 AADAIKFTV 771
A A K TV
Sbjct: 904 ATHAEKSTV 912
>gi|30250347|ref|NP_842417.1| ribonucleotide-diphosphate reductase subunit alpha [Nitrosomonas
europaea ATCC 19718]
gi|30181142|emb|CAD86335.1| Ribonucleotide reductase large subunit [Nitrosomonas europaea ATCC
19718]
Length = 955
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 309/830 (37%), Positives = 461/830 (55%), Gaps = 55/830 (6%)
Query: 4 VKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAET 63
V +G++ + ++ AR++ L D L+ + + +Y GV ++ + A +
Sbjct: 153 VVENGQKIPLDPAQLMARIESACQNLG-NTVDAALIVKSMLKDLYDGVPAEEVRKSAILS 211
Query: 64 AAAMTTNHPDYASLAARIVVSNLHKNT--KKSFSETIKDMYNHYNE---RSGLKAPLIAD 118
A A+ P Y+ + AR+++ N+ ++ E ++ Y Y R G++A L+ +
Sbjct: 212 ARALIEKEPAYSFVTARLLLDNIRYEVLGEEVAHEAMQSRYAEYFPEFVRKGIEAGLLDE 271
Query: 119 DVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGI 178
+ + ARL + DRD + Y G +TL Y L V + +E PQ MRVA+G+
Sbjct: 272 RLGQF---DLARLSEALAADRDLQFGYLGLQTLYDRYFLHVSERRIELPQIFFMRVAMGL 328
Query: 179 HKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTL 235
++ID AI+ YH++S+ F ++PTLFN+GT R+QLSSC+L + D S++GIY+ +
Sbjct: 329 ALNEIDREARAIEFYHLLSKFDFMSSTPTLFNSGTRRSQLSSCYLSTVPD-SLDGIYEAI 387
Query: 236 KECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKG 295
KE A++SK AGG+G +RA G+ I+GTNG S G+VP L+V +DTA V+QGG KRKG
Sbjct: 388 KENALLSKFAGGLGNDWTPVRAMGARIKGTNGKSQGVVPFLKVVSDTAVAVNQGG-KRKG 446
Query: 296 AFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNE 355
A YLE WH DI EFL+LRKN G + R D+ A+WVPDLFM+R+Q + W+LF P++
Sbjct: 447 AVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTAVWVPDLFMKRMQEDQEWTLFSPSD 506
Query: 356 APGLADCWGTEFERLYTKYEKEGKAKKV-----VQAQNLWFEILKSQIETGTPYMLFKDT 410
P L D +G FE Y YE++ ++ + A+ LW ++L ETG P++ FKD
Sbjct: 507 TPDLHDKFGRAFEEAYIAYEEQAAQGRLTLFKRIPARQLWRKMLTMLFETGHPWITFKDP 566
Query: 411 CNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLV 470
CN +S Q ++G + SSNLCTE+ TS E AVCNL S+ L ++ + KL
Sbjct: 567 CNIRSPQNHVGVVHSSNLCTEITLNTSEKEIAVCNLGSVNLLAHIVD---------GKL- 616
Query: 471 GSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADT 530
D +L + L+ +ID+N+Y V AR +N RHRP+G+G+ G D
Sbjct: 617 ----------DQARLKQTVTTAMRMLDNVIDINFYAVAKARNANFRHRPVGLGIMGFQDC 666
Query: 531 FILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMW 590
LG+ + S EA + E + YH S+E+A G Y TY GS +GIL D
Sbjct: 667 LHKLGISYASPEAVEFADRSMEAVAYHTYWASTELAEERGTYATYRGSLWDRGILPQDTL 726
Query: 591 G-----------VNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPY 639
++ S DW LRD I + G+RNS +A PTA+ S I+G + EP
Sbjct: 727 ELLREERGGHVEIDTSSTQDWDALRDRIRQYGMRNSNCLAIAPTATISNIIGVSASIEPT 786
Query: 640 TSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIY 699
N+Y + LSGEF VVN+ L++DL + LW ++ + + DG+V KI ++PE L+ +Y
Sbjct: 787 YQNLYVKSNLSGEFTVVNQWLVNDLKKQDLWDEVMIADLKHYDGAVSKIDRVPENLRNLY 846
Query: 700 KTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLR 759
T +E+ + LV+ A R +ID +QSLN++M + K+ L+ AWLRGLKT YYLR
Sbjct: 847 ATAFEVDPRWLVEAASRRQKWIDQAQSLNLYMAGASGKKMDELYRLAWLRGLKT-TYYLR 905
Query: 760 SRAAADAIKFTVDTSVLKENPKVTDDDDAKMAQMV---CSLTNREECMAC 806
+ A A K TV T L P + +A C++ N EC AC
Sbjct: 906 ALGATTAEKSTVHTGTLNAVPAQHEAHAGNLAHSAPQQCAIDN-PECEAC 954
>gi|421650893|ref|ZP_16091266.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC0162]
gi|425747585|ref|ZP_18865588.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii WC-348]
gi|445457674|ref|ZP_21446662.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC047]
gi|408509658|gb|EKK11329.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC0162]
gi|425493503|gb|EKU59735.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii WC-348]
gi|444776291|gb|ELX00337.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC047]
Length = 944
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 316/852 (37%), Positives = 464/852 (54%), Gaps = 76/852 (8%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
+ V +G+ + + + A + + + GL E D + + +Y GV S +
Sbjct: 122 LQVTDANGQLQPLDLSALQATVNRAAEGL--EGIDVQAIIDETVKNLYNGVKESDIATTM 179
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSF----SETIKDMYNHYNERSGLKAPLI 116
P+Y + AR++ L +T +F ++T ++ + G++ L+
Sbjct: 180 MMATRTRIEQEPNYTYVTARLLRDEL-VSTGLAFLGLPADTAENNALEAFLKKGVELDLL 238
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAV 176
+ D+ ++ +L + I +R + Y G +TL Y + G E PQ MRV++
Sbjct: 239 SPDLLKFDLE---KLAAAIQPERSNQFTYLGLQTLFDRYFIHSNGVRFELPQLFFMRVSM 295
Query: 177 GI---HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYD 233
G+ +D + AI+ Y+++S + ++PTLFN+GT R QLSSC+L + DD + IY
Sbjct: 296 GLALNEQDKEERAIEFYNLLSSFDYMASTPTLFNSGTLRPQLSSCYLTTIGDD-LYDIYG 354
Query: 234 TLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKR 293
+++ A++SK AGG+G +RA SYI+GTNG S G+VP L+V NDTA V+QGG KR
Sbjct: 355 AMRDNAMLSKWAGGLGNDWTPVRALNSYIKGTNGKSQGVVPFLKVANDTAVAVNQGG-KR 413
Query: 294 KGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCP 353
KGA YLE WH DI EFL+LRKN G + R D+ A WVPDLFM+RV +G W+LF P
Sbjct: 414 KGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWVPDLFMQRVFEDGEWTLFTP 473
Query: 354 NEAPGLADCWGTEFERLYTKYEKEGKAK----KVVQAQNLWFEILKSQIETGTPYMLFKD 409
+E P L D G EF Y YE K + K V+A++LW ++L ETG P++ FKD
Sbjct: 474 SETPDLHDLTGAEFAERYAYYESVAKEQNMLHKKVRAKDLWRKMLSMLFETGHPWITFKD 533
Query: 410 TCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKL 469
CN +S QQ++G + SSNLCTE+ T+ E AVCNL SI L ++V
Sbjct: 534 VCNLRSPQQHVGVVHSSNLCTEITLNTNQDEIAVCNLGSINLVQHV-------------- 579
Query: 470 VGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
K D EKLA L+ +ID+NYY V A+ SNL+HRP+G+G+ G D
Sbjct: 580 ------KGGVLDREKLARTVKTAVRMLDNVIDINYYAVPQAKNSNLKHRPVGMGIMGFQD 633
Query: 530 TFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPD- 588
+GM + S EA + E I Y+A++TSS++A G Y T+ GS +GIL D
Sbjct: 634 ALYEMGMAYGSDEAVNFADESMEVISYYAIQTSSDLAVERGAYSTFKGSLWDQGILPIDS 693
Query: 589 -----------MWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFE 637
M+ V+ + R DW LR + K+G+RNS ++A PTA+ S I G ++ E
Sbjct: 694 LEIVAKSRPERMFEVDRTQRLDWDSLRAKVQKDGMRNSNVMAIAPTATISNICGVSQSIE 753
Query: 638 PYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKA 697
P N+Y + LSGEF V+N +L+ L E GLW ++ N + + +GSVQKI +IPEELKA
Sbjct: 754 PTFQNLYVKSNLSGEFTVINPYLVRALKERGLWDTVMVNDLKHFEGSVQKIARIPEELKA 813
Query: 698 IYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYY 757
I+ T +E++ + +VD A R +ID +QSLN+++ N KL + AWLRGLKT YY
Sbjct: 814 IFATAFEVEPRWIVDAASRRQKWIDQAQSLNLYISGANGKKLDITYKMAWLRGLKT-TYY 872
Query: 758 LRSRAAADAIKFTVDTSVLK--------------------ENPKVTDDD---DAKMAQMV 794
LR+ A A K T++T L + P+ ++D A M
Sbjct: 873 LRALGATSAEKSTINTGALNAVKPATVEAAAPAAAPVVEAKKPEAVEEDGFTQAAPVPMA 932
Query: 795 CSLTNREECMAC 806
CS+ N +C AC
Sbjct: 933 CSIDN-PDCEAC 943
>gi|421890673|ref|ZP_16321528.1| Ribonucleoside-diphosphate reductase, alpha subunit [Ralstonia
solanacearum K60-1]
gi|378964040|emb|CCF98276.1| Ribonucleoside-diphosphate reductase, alpha subunit [Ralstonia
solanacearum K60-1]
Length = 987
Score = 533 bits (1374), Expect = e-148, Method: Compositional matrix adjust.
Identities = 303/767 (39%), Positives = 434/767 (56%), Gaps = 47/767 (6%)
Query: 35 DPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKN----- 89
DP + ++ +Y+GV SQ+ + A A + P Y+ ARI++ + +
Sbjct: 183 DPEPILKETVKNLYEGVPMSQVYDSAILAARTLIEKDPAYSQATARILLHTIRREILGEE 242
Query: 90 -TKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGF 148
T+ + D + + +R G+ A L+ D + + A+L + + RD ++Y G
Sbjct: 243 VTQAEMAARYVDYFPQFIKR-GINAGLLDDTLAQF---DLAKLGAALDASRDLQFNYLGL 298
Query: 149 KTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASPTL 205
+TL Y L + K +E PQ MRVA+G+ ++ID AI+ Y ++S F ++PTL
Sbjct: 299 QTLYDRYFLHISDKRIEMPQAFFMRVAMGLSLNEIDREARAIEFYQLLSSFDFMSSTPTL 358
Query: 206 FNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGT 265
FN+GT R+QLSSC+L + DD ++GIY+ LKE A++SK AGG+G N+RA GS+I+GT
Sbjct: 359 FNSGTCRSQLSSCYLTTVSDD-LDGIYEALKENALLSKFAGGLGNDWTNVRALGSHIKGT 417
Query: 266 NGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRA 325
NG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R
Sbjct: 418 NGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRT 476
Query: 326 RDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EGKA 380
D+ A W+PDLFM+RV NG W+LF P+ P L D G FE+ Y YE+ E
Sbjct: 477 HDMNTANWIPDLFMKRVMENGEWTLFSPSTCPDLHDKVGRAFEQAYLGYEEKVARGEITL 536
Query: 381 KKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTE 440
K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ T+ +E
Sbjct: 537 FKKMPAMQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTNDSE 596
Query: 441 TAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKII 500
AVCNL S+ L ++ + + + D +KL + L+ +I
Sbjct: 597 IAVCNLGSVNLVAHLVQ---------------QADGSYALDHDKLKKTVRTAMRMLDNVI 641
Query: 501 DVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALR 560
D+NYY V+ AR SNLRHRP+G+GV G D +L +P+ + A Q E + Y+A
Sbjct: 642 DINYYAVKKARDSNLRHRPVGLGVMGFQDALHVLRIPYANDAAVQFADTSMEAVCYYAYW 701
Query: 561 TSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDR-----------WDWGGLRDMISK 609
S+E+A G Y TY GS +GIL D + +R DW LR I +
Sbjct: 702 ASTELAEERGRYSTYKGSLWDRGILPQDSLKLLAQERGGYLETDLSSTMDWDSLRGRIQQ 761
Query: 610 NGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGL 669
G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL GL
Sbjct: 762 YGMRNSNCVAIAPTATISNIIGVSACIEPTYQNLYVKSNLSGEFTVVNDYLVRDLKARGL 821
Query: 670 WSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNI 729
W ++ + Y DGS+ +I +IP++L+ +Y T +E++ + LV+ A R +ID +QSLNI
Sbjct: 822 WDEVMVADLKYFDGSLARIDRIPQDLRDLYATAFEVEPQWLVEAASRRQKWIDQAQSLNI 881
Query: 730 HMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
+M + L + AWLRGLKT YYLR+ A K TV L
Sbjct: 882 YMAGASGKMLDDTYKLAWLRGLKT-TYYLRTIGATHVEKSTVSRGTL 927
>gi|414163223|ref|ZP_11419470.1| ribonucleoside-diphosphate reductase, alpha subunit [Afipia felis
ATCC 53690]
gi|410881003|gb|EKS28843.1| ribonucleoside-diphosphate reductase, alpha subunit [Afipia felis
ATCC 53690]
Length = 966
Score = 533 bits (1374), Expect = e-148, Method: Compositional matrix adjust.
Identities = 309/822 (37%), Positives = 456/822 (55%), Gaps = 77/822 (9%)
Query: 31 IEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKN- 89
++ DP V + +Y G++ +L + A + P+YA ++AR+++ L
Sbjct: 175 LDAVDPAPVLAEARRNLYDGISQDELALASIMAARTLVEQEPNYAYVSARLLLDKLRSEV 234
Query: 90 ------TKKSFSETIKDMYNHYNE------RSGLKAPLIADDV--YDIIMKNAARLDSEI 135
T + S++ DM Y E ++G+++ L+ ++ +D+ ARL + +
Sbjct: 235 LSFVHGTPSNASQS--DMATRYAEYFPAYIKTGIESELLDPELGRFDL-----ARLAAAL 287
Query: 136 IYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHM 192
+RD + + G +TL Y L V G +E PQ MRVA+G+ +ID AI+ Y++
Sbjct: 288 KPERDLQFQFLGLQTLYDRYFLHVHGARIELPQAFFMRVAMGLAVREIDREARAIEFYNL 347
Query: 193 MSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSV 252
+S F ++PTLFN+GT R QLSSCFL + DD ++GI+ +K+ A+++K +GG+G
Sbjct: 348 LSSFDFMASTPTLFNSGTLRPQLSSCFLTTVADD-LDGIFKAVKDNALLAKYSGGLGNDW 406
Query: 253 HNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFL 312
+R G++I+GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL
Sbjct: 407 TPVRGLGAHIKGTNGESQGVVPFLKVANDTAIAVNQGG-KRKGAVCAYLETWHIDIEEFL 465
Query: 313 DLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYT 372
DLRKN G + R D+ A WVPDLFM+RV+++G W+LF PNE P L D +G F+ Y
Sbjct: 466 DLRKNTGDDRRRTHDMNTANWVPDLFMQRVEADGEWTLFSPNETPDLHDLYGPAFKTAYE 525
Query: 373 KYEK-----EGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSN 427
YE E + K V+A +LW +L ETG P++ FKD CN +S QQ+ G + SSN
Sbjct: 526 GYEAKAARGEIRVFKQVRATDLWRRMLTMLFETGHPWITFKDPCNLRSPQQHTGVVHSSN 585
Query: 428 LCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAE 487
LCTE+ TS E AVCNL SI L + G+ D +KL
Sbjct: 586 LCTEITLNTSADEVAVCNLGSINLLNHTTREGL--------------------DRDKLQR 625
Query: 488 VTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLN 547
L+ +ID+N+Y + ARRSNL+HRP+G+G+ G D + +P S A
Sbjct: 626 TITTAVRMLDNVIDINFYTIPEARRSNLKHRPVGMGLMGFQDALHVQRIPIASDAAVAFA 685
Query: 548 KDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDMWGV----------NPSDR 597
+ E I YHA+ S ++A G Y ++ GS S+GIL D + N S
Sbjct: 686 DESMEIISYHAISASVDLAVERGRYPSFDGSLWSQGILPIDSVAILSKARDGAPLNASAT 745
Query: 598 WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVN 657
DW LR+ + K+G+RNS ++A PTA+ S I G + EP N++ + +SG+F VVN
Sbjct: 746 LDWSSLRERVRKDGMRNSNVMAIAPTATISNICGVAQSIEPSYQNLFVKSNMSGDFTVVN 805
Query: 658 KHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDR 717
+HL+HDL GLW ++ + + Y DGSV +I ++P++LKA+Y T +EI L++ A R
Sbjct: 806 EHLVHDLKSRGLWDEVMVSDLKYFDGSVGQIDRVPDDLKALYATAFEIDTSWLIESAARR 865
Query: 718 GCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVD----- 772
+ID +QSLN+++ P+ KL L+ AW GLKT YYLRSR+A K T+
Sbjct: 866 QKWIDQAQSLNLYIANPSGKKLDQLYRLAWQLGLKT-TYYLRSRSATHVEKSTLKGTDGK 924
Query: 773 ------TSVLKENPKVTDDDDAKMAQMV--CSLTNREECMAC 806
+ +L P + + A V CS+ N +C AC
Sbjct: 925 LNAVSASGMLAHAPIIIPNATAPDLDGVHACSIDN-PDCEAC 965
>gi|169797063|ref|YP_001714856.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii AYE]
gi|184157024|ref|YP_001845363.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii ACICU]
gi|213156531|ref|YP_002318192.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii AB0057]
gi|215484524|ref|YP_002326759.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii AB307-0294]
gi|239501300|ref|ZP_04660610.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii AB900]
gi|260555645|ref|ZP_05827865.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii ATCC 19606 = CIP 70.34]
gi|301345631|ref|ZP_07226372.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii AB056]
gi|301512782|ref|ZP_07238019.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii AB058]
gi|301596293|ref|ZP_07241301.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii AB059]
gi|332852153|ref|ZP_08433980.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii 6013150]
gi|332867552|ref|ZP_08437705.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii 6013113]
gi|332872598|ref|ZP_08440566.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii 6014059]
gi|384130703|ref|YP_005513315.1| nrdA [Acinetobacter baumannii 1656-2]
gi|384141990|ref|YP_005524700.1| ribonucleoside diphosphate reductase, alpha subunit [Acinetobacter
baumannii MDR-ZJ06]
gi|385236292|ref|YP_005797631.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii TCDC-AB0715]
gi|387125061|ref|YP_006290943.1| ribonucleoside-diphosphate reductase,
adenosylcobalamin-dependent/ribonucleoside-diphosphate
reductase, alpha subunit [Acinetobacter baumannii
MDR-TJ]
gi|403673287|ref|ZP_10935588.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
sp. NCTC 10304]
gi|407931630|ref|YP_006847273.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii TYTH-1]
gi|416145354|ref|ZP_11600393.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii AB210]
gi|417544082|ref|ZP_12195168.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC032]
gi|417548718|ref|ZP_12199799.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Naval-18]
gi|417553465|ref|ZP_12204534.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Naval-81]
gi|417560452|ref|ZP_12211331.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC137]
gi|417565176|ref|ZP_12216050.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC143]
gi|417570545|ref|ZP_12221402.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC189]
gi|417573131|ref|ZP_12223985.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Canada BC-5]
gi|417577645|ref|ZP_12228490.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Naval-17]
gi|417870671|ref|ZP_12515626.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii ABNIH1]
gi|417872421|ref|ZP_12517323.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii ABNIH2]
gi|417876818|ref|ZP_12521568.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii ABNIH3]
gi|417881621|ref|ZP_12525934.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii ABNIH4]
gi|421201407|ref|ZP_15658566.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC109]
gi|421204645|ref|ZP_15661763.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii AC12]
gi|421456517|ref|ZP_15905859.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii IS-123]
gi|421534674|ref|ZP_15980945.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii AC30]
gi|421621934|ref|ZP_16062845.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC074]
gi|421625034|ref|ZP_16065890.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC098]
gi|421627999|ref|ZP_16068785.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC180]
gi|421632724|ref|ZP_16073371.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Naval-13]
gi|421642485|ref|ZP_16083001.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii IS-235]
gi|421649045|ref|ZP_16089441.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii IS-251]
gi|421655829|ref|ZP_16096143.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Naval-72]
gi|421659041|ref|ZP_16099267.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Naval-83]
gi|421667566|ref|ZP_16107632.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC087]
gi|421670410|ref|ZP_16110408.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC099]
gi|421675150|ref|ZP_16115075.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC065]
gi|421677163|ref|ZP_16117056.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC111]
gi|421686844|ref|ZP_16126588.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii IS-143]
gi|421692756|ref|ZP_16132406.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii IS-116]
gi|421696464|ref|ZP_16136050.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii WC-692]
gi|421699198|ref|ZP_16138733.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii IS-58]
gi|421702437|ref|ZP_16141919.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii ZWS1122]
gi|421706175|ref|ZP_16145593.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii ZWS1219]
gi|421788140|ref|ZP_16224450.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Naval-82]
gi|421792968|ref|ZP_16229106.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Naval-2]
gi|421795235|ref|ZP_16231319.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Naval-21]
gi|421799027|ref|ZP_16235035.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Canada BC1]
gi|421803401|ref|ZP_16239319.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii WC-A-694]
gi|424053542|ref|ZP_17791074.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Ab11111]
gi|424061002|ref|ZP_17798493.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Ab33333]
gi|424062801|ref|ZP_17800286.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Ab44444]
gi|425752584|ref|ZP_18870491.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Naval-113]
gi|445449207|ref|ZP_21444202.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii WC-A-92]
gi|445468731|ref|ZP_21450944.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC338]
gi|445480431|ref|ZP_21455506.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Naval-78]
gi|169149990|emb|CAM87884.1| ribonucleoside diphosphate reductase, alpha subunit [Acinetobacter
baumannii AYE]
gi|183208618|gb|ACC56016.1| Ribonucleotide reductase, alpha subunit [Acinetobacter baumannii
ACICU]
gi|193076531|gb|ABO11187.2| ribonucleoside diphosphate reductase alpha subunit [Acinetobacter
baumannii ATCC 17978]
gi|213055691|gb|ACJ40593.1| ribonucleoside-diphosphate reductase alpha subunit [Acinetobacter
baumannii AB0057]
gi|213986949|gb|ACJ57248.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii AB307-0294]
gi|260410556|gb|EEX03854.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii ATCC 19606 = CIP 70.34]
gi|322506923|gb|ADX02377.1| nrdA [Acinetobacter baumannii 1656-2]
gi|323516790|gb|ADX91171.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii TCDC-AB0715]
gi|332729525|gb|EGJ60864.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii 6013150]
gi|332733969|gb|EGJ65114.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii 6013113]
gi|332739127|gb|EGJ69986.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii 6014059]
gi|333366900|gb|EGK48914.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii AB210]
gi|342227413|gb|EGT92347.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii ABNIH1]
gi|342233591|gb|EGT98307.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii ABNIH2]
gi|342236993|gb|EGU01488.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii ABNIH3]
gi|342238680|gb|EGU03108.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii ABNIH4]
gi|347592483|gb|AEP05204.1| ribonucleoside diphosphate reductase, alpha subunit [Acinetobacter
baumannii MDR-ZJ06]
gi|385879553|gb|AFI96648.1| ribonucleoside-diphosphate reductase,
adenosylcobalamin-dependent/ribonucleoside-diphosphate
reductase, alpha subunit [Acinetobacter baumannii
MDR-TJ]
gi|395523034|gb|EJG11123.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC137]
gi|395550993|gb|EJG17002.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC189]
gi|395556932|gb|EJG22933.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC143]
gi|395563439|gb|EJG25092.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC109]
gi|395570866|gb|EJG31528.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Naval-17]
gi|398325798|gb|EJN41958.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii AC12]
gi|400208699|gb|EJO39669.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Canada BC-5]
gi|400210945|gb|EJO41909.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii IS-123]
gi|400381970|gb|EJP40648.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC032]
gi|400389017|gb|EJP52089.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Naval-18]
gi|400389882|gb|EJP56929.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Naval-81]
gi|404559401|gb|EKA64658.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii IS-116]
gi|404561644|gb|EKA66870.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii WC-692]
gi|404567307|gb|EKA72433.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii IS-143]
gi|404571825|gb|EKA76874.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii IS-58]
gi|404667680|gb|EKB35593.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Ab11111]
gi|404668954|gb|EKB36863.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Ab33333]
gi|404675171|gb|EKB42887.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Ab44444]
gi|407194179|gb|EKE65323.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii ZWS1122]
gi|407194607|gb|EKE65746.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii ZWS1219]
gi|407900211|gb|AFU37042.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii TYTH-1]
gi|408506852|gb|EKK08556.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Naval-72]
gi|408513212|gb|EKK14846.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii IS-235]
gi|408514294|gb|EKK15901.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii IS-251]
gi|408696697|gb|EKL42226.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC074]
gi|408699459|gb|EKL44935.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC098]
gi|408708432|gb|EKL53706.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Naval-13]
gi|408708520|gb|EKL53793.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC180]
gi|408708980|gb|EKL54242.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Naval-83]
gi|409987340|gb|EKO43522.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii AC30]
gi|410382697|gb|EKP35236.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC065]
gi|410383746|gb|EKP36266.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC087]
gi|410385089|gb|EKP37584.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC099]
gi|410393441|gb|EKP45794.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC111]
gi|410398228|gb|EKP50450.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Naval-2]
gi|410402122|gb|EKP54251.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Naval-21]
gi|410403711|gb|EKP55789.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Naval-82]
gi|410411238|gb|EKP63118.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Canada BC1]
gi|410412992|gb|EKP64836.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii WC-A-694]
gi|425498815|gb|EKU64881.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Naval-113]
gi|444756950|gb|ELW81486.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii WC-A-92]
gi|444771447|gb|ELW95576.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii Naval-78]
gi|444774966|gb|ELW99037.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC338]
gi|452948351|gb|EME53830.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii MSP4-16]
Length = 944
Score = 533 bits (1374), Expect = e-148, Method: Compositional matrix adjust.
Identities = 316/852 (37%), Positives = 464/852 (54%), Gaps = 76/852 (8%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
+ V +G+ + + + A + + + GL E D + + +Y GV S +
Sbjct: 122 LQVTDANGQLQPLDLSALQATVNRAAEGL--EGIDVQAIIDETVKNLYNGVKESDIATTM 179
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSF----SETIKDMYNHYNERSGLKAPLI 116
P+Y + AR++ L +T +F ++T ++ + G++ L+
Sbjct: 180 MMATRTRIEQEPNYTYVTARLLRDEL-VSTGLAFLGLPADTAENNALEAFLKKGVELDLL 238
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAV 176
+ D+ ++ +L + I +R + Y G +TL Y + G E PQ MRV++
Sbjct: 239 SPDLLKFDLE---KLAAAIQPERSNQFTYLGLQTLFDRYFIHSNGVRFELPQLFFMRVSM 295
Query: 177 GI---HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYD 233
G+ +D + AI+ Y+++S + ++PTLFN+GT R QLSSC+L + DD + IY
Sbjct: 296 GLALNEQDKEERAIEFYNLLSSFDYMASTPTLFNSGTLRPQLSSCYLTTIGDD-LYDIYG 354
Query: 234 TLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKR 293
+++ A++SK AGG+G +RA SYI+GTNG S G+VP L+V NDTA V+QGG KR
Sbjct: 355 AMRDNAMLSKWAGGLGNDWTPVRALNSYIKGTNGKSQGVVPFLKVANDTAVAVNQGG-KR 413
Query: 294 KGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCP 353
KGA YLE WH DI EFL+LRKN G + R D+ A WVPDLFM+RV +G W+LF P
Sbjct: 414 KGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWVPDLFMQRVFEDGEWTLFTP 473
Query: 354 NEAPGLADCWGTEFERLYTKYEKEGKAK----KVVQAQNLWFEILKSQIETGTPYMLFKD 409
+E P L D G EF Y YE K + K V+A++LW ++L ETG P++ FKD
Sbjct: 474 SETPDLHDLTGAEFAERYAYYESVAKEQNMLHKKVRAKDLWRKMLSMLFETGHPWITFKD 533
Query: 410 TCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKL 469
CN +S QQ++G + SSNLCTE+ T+ E AVCNL SI L ++V
Sbjct: 534 VCNLRSPQQHVGVVHSSNLCTEITLNTNQDEIAVCNLGSINLVQHV-------------- 579
Query: 470 VGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
K D EKLA L+ +ID+NYY V A+ SNL+HRP+G+G+ G D
Sbjct: 580 ------KGGVLDREKLARTVKTAVRMLDNVIDINYYAVPQAKNSNLKHRPVGMGIMGFQD 633
Query: 530 TFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPD- 588
+GM + S EA + E I Y+A++TSS++A G Y T+ GS +GIL D
Sbjct: 634 ALYEMGMAYGSDEAVNFADESMEVISYYAIQTSSDLAVERGAYSTFKGSLWDQGILPIDS 693
Query: 589 -----------MWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFE 637
M+ V+ + R DW LR + K+G+RNS ++A PTA+ S I G ++ E
Sbjct: 694 LEIVAKSRPERMFEVDRTQRLDWDSLRAKVQKDGMRNSNVMAIAPTATISNICGVSQSIE 753
Query: 638 PYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKA 697
P N+Y + LSGEF V+N +L+ L E GLW ++ N + + +GSVQKI +IPEELKA
Sbjct: 754 PTFQNLYVKSNLSGEFTVINPYLVRALKERGLWDTVMVNDLKHFEGSVQKIARIPEELKA 813
Query: 698 IYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYY 757
I+ T +E++ + +VD A R +ID +QSLN+++ N KL + AWLRGLKT YY
Sbjct: 814 IFATAFEVEPRWIVDAASRRQKWIDQAQSLNLYISGANGKKLDITYKMAWLRGLKT-TYY 872
Query: 758 LRSRAAADAIKFTVDTSVLK--------------------ENPKVTDDD---DAKMAQMV 794
LR+ A A K T++T L + P+ ++D A M
Sbjct: 873 LRALGATSAEKSTINTGALNAVKPATVEAAAPAAAPVVEAKKPEAVEEDGFTQAAPVPMA 932
Query: 795 CSLTNREECMAC 806
CS+ N +C AC
Sbjct: 933 CSIDN-PDCEAC 943
>gi|393778161|ref|ZP_10366443.1| ribonucleotide-diphosphate reductase subunit alpha [Ralstonia sp.
PBA]
gi|392714896|gb|EIZ02488.1| ribonucleotide-diphosphate reductase subunit alpha [Ralstonia sp.
PBA]
Length = 975
Score = 533 bits (1374), Expect = e-148, Method: Compositional matrix adjust.
Identities = 311/770 (40%), Positives = 432/770 (56%), Gaps = 53/770 (6%)
Query: 35 DPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSF 94
DP + + +Y GV SQ+ + A A + P Y+ + ARI+ LH K+
Sbjct: 185 DPEPILAETIKNLYDGVPMSQVYDSAILAARTLIEQDPAYSQVTARIL---LHTIRKEIL 241
Query: 95 SETIK--DMYNHYNE------RSGLKAPLIADDVYDI-IMKNAARLDSEIIYDRDFDYDY 145
E + +M Y E + G+ A L+ + + + K A LD+ RDF ++Y
Sbjct: 242 GEEVTQGEMVTRYAEYFPKYIKRGIDAELLDEKLAQFDLQKLGAALDAS----RDFQFNY 297
Query: 146 FGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHAS 202
G +TL Y L +E PQ MRVA+G+ ++ID AI+ Y ++S F ++
Sbjct: 298 LGLQTLYDRYFLHHNDVRIEMPQAFFMRVAMGLALNEIDREARAIEFYQLLSSFDFMSST 357
Query: 203 PTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYI 262
PTLFN+GT R+QLSSC+L + DD ++GIY+ LKE A++SK AGG+G N+RA GS+I
Sbjct: 358 PTLFNSGTRRSQLSSCYLTTVSDD-LDGIYEALKENALLSKFAGGLGNDWTNVRALGSHI 416
Query: 263 RGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEE 322
+GTNG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G +
Sbjct: 417 KGTNGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDR 475
Query: 323 HRARDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----E 377
R D+ A W+PDLFM+RV G W+LF P+ P L D +G FE Y YE E
Sbjct: 476 RRTHDMNTANWIPDLFMKRVMEGGDWTLFSPSTCPDLHDKFGKAFEEAYVAYEDKVARGE 535
Query: 378 GKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTS 437
K K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ T+
Sbjct: 536 LKLFKKIPAVQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTN 595
Query: 438 PTETAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLN 497
+E AVCNL S+ L +++ + S D +KL + L+
Sbjct: 596 DSEIAVCNLGSVNLLAHMK---------------ADASGAMVLDHDKLKKTIRTAMRMLD 640
Query: 498 KIIDVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYH 557
+ID+NYY V+ AR SNLRHRP+G+G+ G D + +P+ S A Q E + Y+
Sbjct: 641 NVIDINYYAVKKARDSNLRHRPVGMGIMGFQDCLHAMRVPYASDAAVQFADTSMEAVCYY 700
Query: 558 ALRTSSEIAAREGPYETYHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRDM 606
A S+E+A G Y +Y GS +GIL D V+ S DW LR
Sbjct: 701 AYWASTELAEERGRYSSYRGSLWDRGILPQDSLKLLAEERGGYVEVDHSSTMDWDSLRGR 760
Query: 607 ISKNGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTE 666
I G+RNS +A PTA+ S I+G + C EP N+Y + LSGEF VVN L+ DL
Sbjct: 761 IKSYGMRNSNCIAIAPTATISNIIGVSACIEPTYQNLYVKSNLSGEFTVVNDFLVRDLKA 820
Query: 667 MGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQS 726
GLW ++ + Y DGS+ +I +IP++L+A+Y T +E++ + LV+ A R +ID +QS
Sbjct: 821 NGLWDEVMVADLKYFDGSLARIDRIPQDLRALYATAFEVEPQWLVEAASRRQKWIDQAQS 880
Query: 727 LNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
LNI+M + KL + AWLRGLKT YYLR+ A A K TV S L
Sbjct: 881 LNIYMAGASGKKLDDTYKLAWLRGLKT-TYYLRTIGATHAEKSTVSRSSL 929
>gi|421663679|ref|ZP_16103823.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC110]
gi|445487511|ref|ZP_21457782.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii AA-014]
gi|408713018|gb|EKL58193.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii OIFC110]
gi|444768401|gb|ELW92616.1| ribonucleoside-diphosphate reductase, alpha subunit [Acinetobacter
baumannii AA-014]
Length = 944
Score = 533 bits (1373), Expect = e-148, Method: Compositional matrix adjust.
Identities = 316/852 (37%), Positives = 464/852 (54%), Gaps = 76/852 (8%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
+ V +G+ + + + A + + + GL E D + + +Y GV S +
Sbjct: 122 LQVTDANGQLQPLDLSALQATVNRAAEGL--EGIDVQAIIDETVKNLYNGVKESDIATTM 179
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSF----SETIKDMYNHYNERSGLKAPLI 116
P+Y + AR++ L +T +F ++T ++ + G++ L+
Sbjct: 180 MMATRTRIEQEPNYTYVTARLLRDEL-VSTGLAFLGLPADTAENNALEAFLKKGVELDLL 238
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAV 176
+ D+ ++ +L + I +R + Y G +TL Y + G E PQ MRV++
Sbjct: 239 SPDLLKFDLE---KLAAAIQPERSNQFTYLGLQTLFDRYFIHSNGVRFELPQLFFMRVSM 295
Query: 177 GI---HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYD 233
G+ +D + AI+ Y+++S + ++PTLFN+GT R QLSSC+L + DD + IY
Sbjct: 296 GLALNEQDKEERAIEFYNLLSSFDYMASTPTLFNSGTLRPQLSSCYLTTIGDD-LYDIYG 354
Query: 234 TLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKR 293
+++ A++SK AGG+G +RA SYI+GTNG S G+VP L+V NDTA V+QGG KR
Sbjct: 355 AMRDNAMLSKWAGGLGNDWTPVRALNSYIKGTNGKSQGVVPFLKVANDTAVAVNQGG-KR 413
Query: 294 KGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCP 353
KGA YLE WH DI EFL+LRKN G + R D+ A WVPDLFM+RV +G W+LF P
Sbjct: 414 KGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWVPDLFMQRVFEDGEWTLFTP 473
Query: 354 NEAPGLADCWGTEFERLYTKYEKEGKAK----KVVQAQNLWFEILKSQIETGTPYMLFKD 409
+E P L D G EF Y YE K + K V+A++LW ++L ETG P++ FKD
Sbjct: 474 SETPDLHDLTGAEFAERYAYYESVAKEQNMLHKKVRAKDLWRKMLSMLFETGHPWITFKD 533
Query: 410 TCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKL 469
CN +S QQ++G + SSNLCTE+ T+ E AVCNL SI L ++V
Sbjct: 534 VCNLRSPQQHVGVVHSSNLCTEITLNTNQDEIAVCNLGSINLVQHV-------------- 579
Query: 470 VGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
K D EKLA L+ +ID+NYY V A+ SNL+HRP+G+G+ G D
Sbjct: 580 ------KGGVLDREKLARTVKTAVRMLDNVIDINYYAVPQAKNSNLKHRPVGMGIMGFQD 633
Query: 530 TFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPD- 588
+GM + S EA + E I Y+A++TSS++A G Y T+ GS +GIL D
Sbjct: 634 ALYEMGMAYGSDEAVNFADESMEVISYYAIQTSSDLAVERGAYSTFKGSLWDQGILPIDS 693
Query: 589 -----------MWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFE 637
M+ V+ + R DW LR + K+G+RNS ++A PTA+ S I G ++ E
Sbjct: 694 LEIVAKSRPERMFEVDRTQRLDWDSLRAKVQKDGMRNSNVMAIAPTATISNICGVSQSIE 753
Query: 638 PYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKA 697
P N+Y + LSGEF V+N +L+ L E GLW ++ N + + +GSVQKI +IPEELKA
Sbjct: 754 PTFQNLYVKSNLSGEFTVINPYLVRALKERGLWDTVMVNDLKHFEGSVQKIARIPEELKA 813
Query: 698 IYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYY 757
I+ T +E++ + +VD A R +ID +QSLN+++ N KL + AWLRGLKT YY
Sbjct: 814 IFATAFEVEPRWIVDAASRRQKWIDQAQSLNLYISGANGKKLDITYKMAWLRGLKT-TYY 872
Query: 758 LRSRAAADAIKFTVDTSVLK--------------------ENPKVTDDD---DAKMAQMV 794
LR+ A A K T++T L + P+ ++D A M
Sbjct: 873 LRALGATSAEKSTINTGALNAVKPATVEAAAPAAAPVVEAKKPEAAEEDGFTQAAPVPMA 932
Query: 795 CSLTNREECMAC 806
CS+ N +C AC
Sbjct: 933 CSIDN-PDCEAC 943
>gi|337281113|ref|YP_004620585.1| ribonucleoside-diphosphate reductase subunit alpha [Ramlibacter
tataouinensis TTB310]
gi|334732190|gb|AEG94566.1| Candidate ribonucleoside-diphosphate reductase, alpha chain
[Ramlibacter tataouinensis TTB310]
Length = 968
Score = 533 bits (1373), Expect = e-148, Method: Compositional matrix adjust.
Identities = 306/796 (38%), Positives = 449/796 (56%), Gaps = 57/796 (7%)
Query: 8 GKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAAM 67
G++ + ++ ++ GL + P ++ + +Y GV ++ + + A +
Sbjct: 154 GERVPLDLGRLKGLIEAACAGLGAD-VKPDPIAAETMRNLYDGVPIDEVYKASILAARTL 212
Query: 68 TTNHPDYASLAARIVVSNLHKNTKKSFSETIK--DMYNHYNE------RSGLKAPLIADD 119
PDY AR++ LH K+ I+ +M Y + + G++A L+ +
Sbjct: 213 IEKDPDYTYATARLL---LHTIFKEVLGRDIEPAEMAASYADYFPGFIKKGVEAELLNPE 269
Query: 120 VYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVGIH 179
++ + RL + + DRD +DY G +TL Y L V+ +E PQ MRVA+G+
Sbjct: 270 ---LLQYDLQRLGAALKADRDLKFDYLGLQTLYDRYFLHVRKTRIELPQAFFMRVAMGLA 326
Query: 180 KDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDTLK 236
++ID AI+ Y ++S F ++PTLFN+GT R+QLSSC+L + DD ++GIY+++K
Sbjct: 327 LNEIDREARAIEFYEVLSSFDFMSSTPTLFNSGTLRSQLSSCYLTTVPDD-LDGIYESIK 385
Query: 237 ECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRKGA 296
E A++SK AGG+G +RA GS+I+GTNG S G+VP L+V NDTA V+QGG KRKGA
Sbjct: 386 ENALLSKFAGGLGNDWTRVRALGSHIKGTNGESQGVVPFLKVVNDTAVAVNQGG-KRKGA 444
Query: 297 FAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPNEA 356
YLE WH DI EFL+LRKN G + R D+ A W+PDLFM RV G W+LF P+
Sbjct: 445 VCTYLESWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMRRVMEKGEWTLFSPSSV 504
Query: 357 PGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQIETGTPYMLFKDTC 411
P L D +G FE+ Y YE+ E K K VQA ++W ++L ETG P++ FKD C
Sbjct: 505 PDLHDLFGAAFEKAYVAYEEKAKRGEIKPSKTVQATDMWRKMLSMLFETGHPWITFKDAC 564
Query: 412 NKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKLVG 471
N +S QQ+ G + SSNLCTE+ TS ETAVCNL SI L +++++ GV
Sbjct: 565 NVRSPQQHAGVVHSSNLCTEITLNTSDAETAVCNLGSINLLQHLKDGGV----------- 613
Query: 472 SRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLADTF 531
D KL L+ +ID+NYY V+ AR SNLRHRP+G+GV D
Sbjct: 614 ---------DHAKLKRTIATAMRMLDNVIDINYYAVKKARDSNLRHRPVGLGVMAFQDAL 664
Query: 532 ILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDM-- 589
L +P+ S A + E + Y+A S+E+A G Y +Y GS KG+L PD
Sbjct: 665 YELRIPYASQAAVEFADRSMEAVCYYAYWASTELARERGRYSSYKGSLWDKGVLPPDTLE 724
Query: 590 --------W-GVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPYT 640
W V+ S DW LR I+++G+RNS VA PTA+ S I+G + EP
Sbjct: 725 LLAQQRGGWVEVDRSATLDWDALRKKIAQDGMRNSNCVAIAPTATISNIIGVDASIEPCF 784
Query: 641 SNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIYK 700
N+ + LSGEF V+N +L+ DL +GLW ++ + + DGS++ I ++P+++K++Y
Sbjct: 785 GNLSVKSNLSGEFTVINHYLVRDLKRLGLWDDVMVMDLKHFDGSLRPIDRVPQDVKSLYA 844
Query: 701 TVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLRS 760
T +E++ LV+ A R +ID +QSLNI+M + KL + AW RGLKT YYLR+
Sbjct: 845 TAFEVEPVWLVEAAARRQKWIDQAQSLNIYMAGASGKKLDETYKLAWTRGLKT-TYYLRT 903
Query: 761 RAAADAIKFTVDTSVL 776
+A + K TV + L
Sbjct: 904 ISATHSEKSTVTSGRL 919
>gi|410692606|ref|YP_003623227.1| putative Ribonucleoside-diphosphate reductase (ribonucleoside
diphosphate reductase, alpha subunit) (Ribonucleotide
reductase large subunit) [Thiomonas sp. 3As]
gi|294339030|emb|CAZ87377.1| putative Ribonucleoside-diphosphate reductase (ribonucleoside
diphosphate reductase, alpha subunit) (Ribonucleotide
reductase large subunit) [Thiomonas sp. 3As]
Length = 974
Score = 533 bits (1373), Expect = e-148, Method: Compositional matrix adjust.
Identities = 312/805 (38%), Positives = 454/805 (56%), Gaps = 72/805 (8%)
Query: 47 VYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETI--KDMYNH 104
+Y GV ++ + A + + PDY+ + AR++ LH +++ +E I + M
Sbjct: 196 LYDGVPMLEVYKAAILASRTLIERDPDYSKVTARLL---LHTMRRETLNEDIPQEQMTQR 252
Query: 105 YNE------RSGLKAPLIADDV--YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYL 156
Y E + G++ L+ + + +D+ ARL + + +RD +DY G +TL Y
Sbjct: 253 YAEYFPRCIKEGVELELLDERLGQFDL-----ARLGAALKAERDLQFDYLGLQTLYDRYF 307
Query: 157 LKVQ--------GKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASPTL 205
L + G+ +E PQ MRVA+G+ ++ID AI+ Y ++S F ++PTL
Sbjct: 308 LANRADTRVNKDGRRIELPQAFFMRVAMGLSLNEIDREARAIEFYELLSSFDFMSSTPTL 367
Query: 206 FNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGT 265
FNAGT R+QLSSC+L + DD ++GIY+ +KE A++SK AGG+G +RA GS+I+GT
Sbjct: 368 FNAGTRRSQLSSCYLTTVADD-LDGIYEAIKENALLSKFAGGLGNDWTRVRALGSHIKGT 426
Query: 266 NGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRA 325
NG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R
Sbjct: 427 NGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRT 485
Query: 326 RDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EGKA 380
D+ A WVPDLFM+RV G W+LF P + P L D +G +FE+ YT+YE+ E K
Sbjct: 486 HDMNTANWVPDLFMKRVMEGGDWTLFSPADVPDLHDKFGKDFEQAYTRYEQKAALGEIKL 545
Query: 381 KKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTE 440
K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ T+ +E
Sbjct: 546 FKTLPAVQLWRKMLSMLFETGHPWITFKDACNVRSPQQHVGVVHSSNLCTEITLNTNESE 605
Query: 441 TAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKII 500
AVCNL S+ L ++++ + G+K D KL L+ +I
Sbjct: 606 IAVCNLGSVNLVAHLKD-------------AADGAK--VIDQAKLKRTIQTAMRMLDNVI 650
Query: 501 DVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALR 560
D+NYY V AR +N++HRP+G+G+ G D L +P+ S +A + E + Y A
Sbjct: 651 DINYYAVAKARNANMKHRPVGLGIMGFQDCLYQLRIPYGSQQAVEFADRSMEAVCYEAYW 710
Query: 561 TSSEIAAREGPYETYHGSPVSKGILQPDMWGV-----------NPSDRWDWGGLRDMISK 609
SSE+A G Y +Y GS +G+L D + + S DW LR I++
Sbjct: 711 ASSELARERGRYSSYGGSLWDQGVLPMDSLKLLAEQRGGYVEADTSSTLDWNALRAQIAQ 770
Query: 610 NGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGL 669
+G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF V+N++L+ DL GL
Sbjct: 771 HGMRNSNCVAIAPTATISNIVGVDACIEPTFQNLYVKSNLSGEFTVINQYLVRDLKARGL 830
Query: 670 WSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNI 729
W ++ + Y DGS Q+I +IP +LKA+Y T +E + +++ A R +ID +QSLNI
Sbjct: 831 WDAVMVADLKYFDGSTQRIDRIPADLKALYSTAFETDTQWIIEAAARRQKWIDQAQSLNI 890
Query: 730 HMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAK 789
+M + L + AWLRGLKT YYLR+ A A K TV L P+ + +
Sbjct: 891 YMANASGKLLDDTYKLAWLRGLKT-TYYLRTIGATHAEKSTVKAGQLNAVPQSPSESASA 949
Query: 790 MAQMV--------CSLTNREECMAC 806
AQ V C++ N EC AC
Sbjct: 950 SAQAVVQSGDIRYCAIDN-PECEAC 973
>gi|33593915|ref|NP_881559.1| ribonucleotide-diphosphate reductase subunit alpha [Bordetella
pertussis Tohama I]
gi|384205220|ref|YP_005590959.1| ribonucleotide-diphosphate reductase subunit alpha [Bordetella
pertussis CS]
gi|408416636|ref|YP_006627343.1| ribonucleoside-diphosphate reductase subunit alpha [Bordetella
pertussis 18323]
gi|33563989|emb|CAE43254.1| ribonucleoside-diphosphate reductase alpha chain [Bordetella
pertussis Tohama I]
gi|332383334|gb|AEE68181.1| ribonucleotide-diphosphate reductase subunit alpha [Bordetella
pertussis CS]
gi|401778806|emb|CCJ64261.1| ribonucleoside-diphosphate reductase alpha chain [Bordetella
pertussis 18323]
Length = 975
Score = 533 bits (1373), Expect = e-148, Method: Compositional matrix adjust.
Identities = 308/792 (38%), Positives = 447/792 (56%), Gaps = 54/792 (6%)
Query: 7 DGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETAAA 66
+G + + + A ++ GL+ ++ D + ++ +Y GV ++ + A A A
Sbjct: 158 NGVRRPLDLAALRATIEAAGEGLT-QYTDTEAILKETVKNLYDGVPVDEVFKSAILAARA 216
Query: 67 MTTNHPDYASLAARIVVSNLHKNTKKSFSETIK--DMYNHYNE------RSGLKAPLIAD 118
+ P Y+ + AR++ LH K+ E + DM Y E + G++ L+
Sbjct: 217 LVEKDPAYSQVTARLL---LHTIRKEVLGEEVSQADMATRYAEYFPAFIQRGIEGGLLDA 273
Query: 119 DVYDIIMKNAAR-LDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVG 177
+ + ++ A+ LD RD + Y G +TL Y L V+G +E PQ MRVA+G
Sbjct: 274 KLAEYDLERVAKALDGR----RDLQFGYLGLQTLYDRYFLHVRGTRIELPQVFFMRVAMG 329
Query: 178 IHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
+ + D AI+ Y ++S F ++PTLFN+GT +QLSSC+L + DD +EGIYD
Sbjct: 330 LALREADREARAIEFYEILSSFDFMSSTPTLFNSGTLHSQLSSCYLTTVSDD-LEGIYDA 388
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+KE A+++K AGG+G +RA S+I+GTNG S G+VP L+V NDTA V+QGG KRK
Sbjct: 389 IKENALLAKYAGGLGNDWTPVRALRSHIKGTNGESQGVVPFLKVVNDTAVAVNQGG-KRK 447
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA YLE WH DI EFL+LRKN G E R D+ A W+PDLFM+RV NG W+LF P+
Sbjct: 448 GAVCTYLETWHLDIEEFLELRKNTGDERRRTHDMNTANWIPDLFMKRVMENGEWTLFSPS 507
Query: 355 EAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQIETGTPYMLFKD 409
+ P L D +G FE+ Y YE E K K + A +LW ++L ETG P++ FKD
Sbjct: 508 DCPDLHDKYGKAFEQAYAGYEAKVASGELKLFKKMPAVSLWRKMLSMLFETGHPWITFKD 567
Query: 410 TCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKL 469
CN +S QQ++G + SSNLCTE+ T+ TE AVCNL S+ L +++ P+
Sbjct: 568 PCNIRSPQQHVGVVHSSNLCTEITLNTNATEIAVCNLGSVNLVAHMK---------PNAN 618
Query: 470 VGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
G + +KL G+ L+ +ID+NYY V+ AR SN RHRP+G+G+ G D
Sbjct: 619 GGYE------LNHDKLKRTIGVAMRMLDNVIDINYYAVDKARNSNERHRPVGMGIMGFQD 672
Query: 530 TFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDM 589
++ +P+ S +A E + YHA SSE+A G Y++Y GS S+GIL D
Sbjct: 673 CLHVMRVPYASQDAIDFADRSMEAVCYHAYWASSELAQERGRYQSYEGSLWSRGILPQDT 732
Query: 590 WG-----------VNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
V+ S DW LR I ++G+RNS +A PTA+ S I+G + C EP
Sbjct: 733 LAMLREERGGNVDVDDSSSLDWDTLRSRIKEHGMRNSNCIAIAPTATISNIIGASACIEP 792
Query: 639 YTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAI 698
N+Y + LSGEF VVN +L+ DL ++GLW ++ + Y DGS+ +I ++P EL+ +
Sbjct: 793 TFQNLYVKSNLSGEFTVVNDYLVRDLKKLGLWDEVMVADLKYFDGSLSRIDRVPSELRKL 852
Query: 699 YKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYL 758
Y T +E++ LV+ A R +ID +QSLNI+M + KL + AW RGLKT YYL
Sbjct: 853 YATAFEVEPSWLVECASRRQKWIDQAQSLNIYMSGASGKKLDDTYKLAWQRGLKT-TYYL 911
Query: 759 RSRAAADAIKFT 770
R+ A A K T
Sbjct: 912 RTLGATSAEKST 923
>gi|386332372|ref|YP_006028541.1| ribonucleoside reductase 1 (large chain) protein [Ralstonia
solanacearum Po82]
gi|334194820|gb|AEG68005.1| ribonucleoside reductase 1 (large chain) protein [Ralstonia
solanacearum Po82]
Length = 987
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 302/767 (39%), Positives = 434/767 (56%), Gaps = 47/767 (6%)
Query: 35 DPVLVSQKVCTGVYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKN----- 89
DP + ++ +Y+GV SQ+ + A A + P Y+ ARI++ + +
Sbjct: 183 DPEPILKETVKNLYEGVPMSQVYDSAILAARTLIEKDPAYSQATARILLHTIRREILGEE 242
Query: 90 -TKKSFSETIKDMYNHYNERSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGF 148
T+ + D + + +R G+ A L+ D + + A+L + + RD ++Y G
Sbjct: 243 VTQAEMAARYVDYFPQFIKR-GINAGLLDDTLAQF---DLAKLGAALDASRDLQFNYLGL 298
Query: 149 KTLERSYLLKVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASPTL 205
+TL Y L + K +E PQ MRVA+G+ ++ID A++ Y ++S F ++PTL
Sbjct: 299 QTLYDRYFLHISDKRIEMPQAFFMRVAMGLSLNEIDREARAVEFYQLLSSFDFMSSTPTL 358
Query: 206 FNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGT 265
FN+GT R+QLSSC+L + DD ++GIY+ LKE A++SK AGG+G N+RA GS+I+GT
Sbjct: 359 FNSGTCRSQLSSCYLTTVSDD-LDGIYEALKENALLSKFAGGLGNDWTNVRALGSHIKGT 417
Query: 266 NGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRA 325
NG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R
Sbjct: 418 NGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRT 476
Query: 326 RDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EGKA 380
D+ A W+PDLFM+RV NG W+LF P+ P L D G FE+ Y YE+ E
Sbjct: 477 HDMNTANWIPDLFMKRVMENGEWTLFSPSTCPDLHDKVGRAFEQAYLGYEEKVARGEITL 536
Query: 381 KKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTE 440
K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ T+ +E
Sbjct: 537 FKKMPAMQLWRKMLGMLFETGHPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTNDSE 596
Query: 441 TAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKII 500
AVCNL S+ L ++ + + + D +KL + L+ +I
Sbjct: 597 IAVCNLGSVNLVAHLVQ---------------QADGSYALDHDKLKKTVRTAMRMLDNVI 641
Query: 501 DVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALR 560
D+NYY V+ AR SNLRHRP+G+GV G D +L +P+ + A Q E + Y+A
Sbjct: 642 DINYYAVKKARDSNLRHRPVGLGVMGFQDALHVLRIPYANEAAVQFADTSMEAVCYYAYW 701
Query: 561 TSSEIAAREGPYETYHGSPVSKGILQPDMWGVNPSDR-----------WDWGGLRDMISK 609
S+E+A G Y TY GS +GIL D + +R DW LR I +
Sbjct: 702 ASTELAEERGRYSTYKGSLWDRGILPQDSLKLLAQERGGYLEADLSSTMDWDSLRGRIQQ 761
Query: 610 NGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGL 669
G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF VVN +L+ DL GL
Sbjct: 762 YGMRNSNCVAIAPTATISNIIGVSACIEPTYQNLYVKSNLSGEFTVVNDYLVRDLKARGL 821
Query: 670 WSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNI 729
W ++ + Y DGS+ +I +IP++L+ +Y T +E++ + LV+ A R +ID +QSLNI
Sbjct: 822 WDEVMVADLKYFDGSLARIDRIPQDLRDLYATAFEVEPQWLVEAASRRQKWIDQAQSLNI 881
Query: 730 HMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
+M + L + AWLRGLKT YYLR+ A K TV L
Sbjct: 882 YMAGASGKMLDDTYKLAWLRGLKT-TYYLRTIGATHVEKSTVSRGTL 927
>gi|241589541|ref|YP_002979566.1| ribonucleoside-diphosphate reductase, alpha subunit [Ralstonia
pickettii 12D]
gi|240868253|gb|ACS65912.1| ribonucleoside-diphosphate reductase, alpha subunit [Ralstonia
pickettii 12D]
Length = 949
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 315/789 (39%), Positives = 444/789 (56%), Gaps = 67/789 (8%)
Query: 59 LAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNE------RSGLK 112
LAA T M P Y AAR+V++ + + T ++ + Y E + +
Sbjct: 186 LAARTKIEM---EPAYTKAAARLVLALQLGHDVFGKAITFDELASSYGEAFARGIKEAVS 242
Query: 113 APLIADDV---YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQH 169
A L+ADD+ +D+ RL + I +RD +DY G +TL YLL + GK +E PQ
Sbjct: 243 AELLADDMTRGFDL-----QRLANAIRPERDCLWDYLGMQTLYDRYLLHIDGKRIELPQA 297
Query: 170 MLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDD 226
LMRVA+G+ +++++ AI+ Y ++S + ++PTLFN G+ R+QLSSC+L + DD
Sbjct: 298 FLMRVAMGLARNEVEREVRAIEFYEVLSTFDYMASTPTLFNTGSLRSQLSSCYLTTISDD 357
Query: 227 SIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYV 286
+EGIYD LKE A++SK AGG+G +RA GSYI+GTNG S GIVP L+V NDTA V
Sbjct: 358 -LEGIYDGLKENALLSKFAGGLGNDWTRVRALGSYIKGTNGKSQGIVPFLKVVNDTAVAV 416
Query: 287 DQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNG 346
+QGG KRKGA YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV
Sbjct: 417 NQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVHEGA 475
Query: 347 LWSLFCPNEAPGLADCWGTEFERLYTKYEKEGKAK-----KVVQAQNLWFEILKSQIETG 401
W+LF PN+ P L D +G++FE Y YE A K A +LW ++L ETG
Sbjct: 476 DWTLFSPNDVPDLHDLYGSKFEERYKHYEALADAGTLKHFKRAPAVDLWRKMLGLLFETG 535
Query: 402 TPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVP 461
P++ FKD CN +S QQ++G + SSNLCTE+ T+ +E AVCNL S+ L ++ +
Sbjct: 536 HPWITFKDPCNIRSPQQHVGVVHSSNLCTEITLNTNDSEIAVCNLGSVNLVAHLVK---- 591
Query: 462 MESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIG 521
+ + D KL I L+ +ID+N+Y V AR SN+RHRP+G
Sbjct: 592 -----------QADGSVALDHVKLRRTIRIAMRMLDNVIDMNFYAVSKARTSNMRHRPVG 640
Query: 522 IGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVS 581
+G+ G D +LG+PF S A + + E I Y+A SS++A G Y +Y+GS S
Sbjct: 641 LGMMGYQDALYVLGIPFGSEAAVEFSDRSMEAICYYAYEASSDLAVERGVYPSYNGSLWS 700
Query: 582 KGILQPD------------MWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQI 629
KGIL D V+ S DW LR+ I + G+RNS VA PTA+ S I
Sbjct: 701 KGILPFDSIDLLVQERGEGYLDVDRSSSMDWDALREKIGRQGMRNSNCVAIAPTATISNI 760
Query: 630 LGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIP 689
+G + EP N+Y + LSGEF +VN++L+ DL ++G+W ++ + + + DGSVQKI
Sbjct: 761 VGVSASNEPQFQNLYVKSNLSGEFTLVNEYLVADLKKLGIWDEVMLSDLKFYDGSVQKID 820
Query: 690 QIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLR 749
++P ++KA Y T +EI+ V+ R +ID +QSLNI+M + KL ++ AWLR
Sbjct: 821 RVPADIKARYATAFEIEPSWSVEAGARRQKWIDQAQSLNIYMAGASGKKLDEVYKLAWLR 880
Query: 750 GLKTGMYYLRSRAAADAIKFTVDTSVLK--------ENPKVTDDDDAKMAQMVCSLT--- 798
GLKT YYLR+ AA K TV L + T + + VC
Sbjct: 881 GLKT-TYYLRTIAATSVEKSTVPLGTLNAVAPSSQMATQQTTQSSEPDVEGRVCMFRPGD 939
Query: 799 -NREECMAC 806
+ E C AC
Sbjct: 940 PDFEGCQAC 948
>gi|241764093|ref|ZP_04762130.1| ribonucleoside-diphosphate reductase, alpha subunit [Acidovorax
delafieldii 2AN]
gi|241366557|gb|EER61045.1| ribonucleoside-diphosphate reductase, alpha subunit [Acidovorax
delafieldii 2AN]
Length = 975
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 301/757 (39%), Positives = 435/757 (57%), Gaps = 56/757 (7%)
Query: 47 VYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIK--DMYNH 104
+Y GV ++ + + A + PDY AR++ LH ++ + DM
Sbjct: 190 LYDGVPMEEVYKASILAARTLIEKDPDYTYATARLL---LHTIVREVLGREVAPADMAQS 246
Query: 105 YNE------RSGLKAPLIADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLK 158
Y + + G++ L+ + ++ + RL + + +RD +DY G +TL Y L
Sbjct: 247 YVDYFPQFIKKGVENDLLDER---LLQYDLQRLGAALKAERDLQFDYLGLQTLYDRYFLH 303
Query: 159 VQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQL 215
V+ +E PQ MRVA+G+ ++ID AI+ Y ++S F ++PTLFN+GT R+QL
Sbjct: 304 VKKNRIELPQAFFMRVAMGLSLNEIDREARAIEFYEILSSFDFMSSTPTLFNSGTLRSQL 363
Query: 216 SSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPM 275
SSC+L + DD ++GIY+++KE A++SK AGG+G +RA GS+I+GTNG S G+VP
Sbjct: 364 SSCYLTTVPDD-LDGIYESIKENALLSKFAGGLGNDWTRVRALGSHIKGTNGESQGVVPF 422
Query: 276 LRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVP 335
L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R D+ A W+P
Sbjct: 423 LKVVNDTAVAVNQGG-KRKGAVCTYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWIP 481
Query: 336 DLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLW 390
DLFM RV G W+LF P+ P L D +GT+FE+ Y YE+ E K + VQA +LW
Sbjct: 482 DLFMRRVMEKGTWTLFSPSNVPDLHDLFGTDFEKAYVAYEEKAARGEIKPARTVQATDLW 541
Query: 391 FEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIA 450
+IL ETG P++ FKD CN +S QQ+ G + SSNLCTE+ TS TETAVCNL S+
Sbjct: 542 RKILTMLFETGHPWITFKDACNVRSPQQHAGVVHSSNLCTEITLNTSDTETAVCNLGSVN 601
Query: 451 LPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETA 510
L +++ KN D +KL + + L+ +ID+NYY V+ A
Sbjct: 602 LLQHL--------------------KNGQIDHDKLKKTITVAMRMLDNVIDINYYAVKKA 641
Query: 511 RRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREG 570
R SNLRHRP+G+GV D+ L +P+ S EA + E I Y+A S+E+A G
Sbjct: 642 RDSNLRHRPVGLGVMAFQDSLYELRIPYASQEAVEFADQSMEAICYYAYWASTELARERG 701
Query: 571 PYETYHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRDMISKNGVRNSLLVA 619
Y +Y GS +GIL D V+ S DW LR I+++G+RNS VA
Sbjct: 702 RYSSYKGSLWDRGILPLDTLDMLAQARGGYVEVDRSATLDWDALRKKIAQDGMRNSNCVA 761
Query: 620 PMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKII 679
PTA+ S I+G + EP N+ + LSGEF V+N L+ DL +GLW ++ +
Sbjct: 762 IAPTATISNIIGVDASIEPSFGNLSVKSNLSGEFTVINGGLVRDLKRLGLWDDVMIMDLK 821
Query: 680 YDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKL 739
+ GS+ I ++P+++KA+Y T +E++ + LV+ A R +ID +QSLNI+M + KL
Sbjct: 822 HFKGSLHPIDRVPQDIKALYSTAFEVEPRWLVEAASRRQKWIDQAQSLNIYMAGASGKKL 881
Query: 740 TSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
+ AW+RGLKT YYLR+++A TV+T L
Sbjct: 882 DDTYKLAWVRGLKT-TYYLRTQSATHVEMSTVNTRQL 917
>gi|381153010|ref|ZP_09864879.1| ribonucleoside-diphosphate reductase, alpha subunit
[Methylomicrobium album BG8]
gi|380884982|gb|EIC30859.1| ribonucleoside-diphosphate reductase, alpha subunit
[Methylomicrobium album BG8]
Length = 935
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 316/827 (38%), Positives = 453/827 (54%), Gaps = 65/827 (7%)
Query: 4 VKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAET 63
V G + + A ++ GLS D V + +Y G+ + + +
Sbjct: 149 VDDGGHRRPLDSSAFIALCREACTGLS--DVDAERVWAQTLPNLYDGMPLAAVRQALVLA 206
Query: 64 AAAMTTNHPDYASLAARIVVSNLHKN------TKKSFSETIKDMYNHYNERSGLKAPLIA 117
A + PDYA +AAR+++SNL + T+ +E D + + +G+ A L+
Sbjct: 207 ARTLIEAEPDYAKVAARLLLSNLRQEATGQPLTQADMAERYADCFAEFLA-AGVAAELLD 265
Query: 118 DDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVG 177
+ + + RL + +RD +DY G +TL Y L V+G+ +E PQ MRVA+G
Sbjct: 266 KRLLEFDLP---RLGRALQAERDLQFDYLGLQTLYDRYFLNVEGRRIELPQCFFMRVAMG 322
Query: 178 IHKDDID---SAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
+ ++ID AI+ Y ++S F ++PTLFN+GT QLSSC+L + DD ++GIY +
Sbjct: 323 LALNEIDRETKAIEFYQVLSSFDFMCSTPTLFNSGTRHPQLSSCYLTTVSDD-LDGIYQS 381
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+KE A++ K AGG+G +RA GS I+GTNG S G++P L+V NDTA V+QGG KRK
Sbjct: 382 IKENALLQKYAGGLGNDWTPVRALGSRIKGTNGHSQGVIPFLKVVNDTAVAVNQGG-KRK 440
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA YLE WH D EFL+LRKN G E RA D+ A WV DLFM+RV+SNG W+LF P
Sbjct: 441 GAVCAYLENWHLDFEEFLELRKNTGDERRRAHDMNTAAWVSDLFMQRVRSNGDWTLFSPV 500
Query: 355 EAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQIETGTPYMLFKD 409
+ P L D +G F Y YE E K K V A LW ++L ETG P++ FKD
Sbjct: 501 DVPDLHDLYGGAFAEAYQAYEAKAERGEIKLYKRVGAVQLWRKMLTMLFETGHPWITFKD 560
Query: 410 TCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKL 469
CN +S QQ+ G I SSNLCTE+ TS ETAVCNL S+ LP ++ E +
Sbjct: 561 ACNLRSPQQHAGVIHSSNLCTEITLNTSADETAVCNLGSVNLPAHLVERDGVWQ------ 614
Query: 470 VGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
D +KL L+ +ID+N+Y AR +NLRHRP+G+G+ G +D
Sbjct: 615 ----------LDADKLQRTIATAMRMLDNVIDINFYATVKARNANLRHRPVGLGMMGFSD 664
Query: 530 TFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDM 589
LG+ + S EA + E + Y+A R S+++A + G Y ++ GS +G+L PD
Sbjct: 665 CLHKLGVSYASPEALEFADRSAEMLCYYAYRASADLAEQRGRYSSFVGSLWQQGVLPPDT 724
Query: 590 W----------GVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEPY 639
GV S + DW LR+ I++ G+RNS VA PTA+ + I+G + EP
Sbjct: 725 LARLIETRGDLGVAASGQLDWHALRERIAQVGMRNSNCVAIAPTATIANIVGVSASIEPV 784
Query: 640 TSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAIY 699
N+Y + LSGEF VVN L+ +L + LW ++ + Y DGS+ I ++PE +KA Y
Sbjct: 785 YQNLYVKSNLSGEFTVVNAALVRELKALDLWDAVMVADLKYFDGSLAAIERVPETIKARY 844
Query: 700 KTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYLR 759
T +EI+ + L++ A R +ID SQSLN+++ P KL L+ AW RGLKT YYLR
Sbjct: 845 ATAFEIEPEWLIEAAARRQKWIDQSQSLNLYVAAPTGSKLDRLYRLAWQRGLKT-TYYLR 903
Query: 760 SRAAADAIKFTVDTSVLKENPKVTDDDDAKMAQMVCSLTNREECMAC 806
+ A T++ K D + A VCS+T+ +C AC
Sbjct: 904 TLGA---------TAMEKTG------DGGEPAAKVCSITD-PDCEAC 934
>gi|407940658|ref|YP_006856299.1| ribonucleotide-diphosphate reductase subunit alpha [Acidovorax sp.
KKS102]
gi|407898452|gb|AFU47661.1| ribonucleotide-diphosphate reductase subunit alpha [Acidovorax sp.
KKS102]
Length = 979
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 300/758 (39%), Positives = 434/758 (57%), Gaps = 57/758 (7%)
Query: 47 VYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKN------TKKSFSETIKD 100
+Y GV ++ + + A + PDY AR+++ + + T+ + KD
Sbjct: 193 LYDGVPMDEVYKASILAARTLIEKDPDYTYATARLLLHTIVREVLGRDVTQSDMGQAYKD 252
Query: 101 MYNHYNERSGLKAPLIADDV---YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLL 157
+ + ++ G+ L+ + + YD+ RL + + +RD +DY G +TL Y L
Sbjct: 253 YFPTFIQK-GVDNELLDERLLKQYDL-----NRLGAALKAERDLQFDYLGLQTLYDRYFL 306
Query: 158 KVQGKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQ 214
V+ +E PQ MRVA+G+ ++ D AI+ Y ++S F ++PTLFN+GT R+Q
Sbjct: 307 HVKKTRIELPQAFFMRVAMGLALNETDREARAIEFYEVLSSFDFMSSTPTLFNSGTLRSQ 366
Query: 215 LSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVP 274
LSSC+L + DD ++GIY+++KE A++SK AGG+G +RA GS+I+GTNG S G+VP
Sbjct: 367 LSSCYLTTVPDD-LDGIYESIKENALLSKFAGGLGNDWTRVRALGSHIKGTNGESQGVVP 425
Query: 275 MLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWV 334
L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R D+ A W+
Sbjct: 426 FLKVVNDTAVAVNQGG-KRKGAVCTYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWI 484
Query: 335 PDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNL 389
PDLFM RV G W+LF P+ P L D +G +FE+ Y YE+ E K K VQA +L
Sbjct: 485 PDLFMRRVMEKGTWTLFSPSNVPDLHDLFGADFEKAYVAYEEKAARGEIKPAKTVQATDL 544
Query: 390 WFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASI 449
W +IL ETG P++ FKD CN +S QQ+ G + SSNLCTE+ TS TETAVCNL S+
Sbjct: 545 WRKILTMLFETGHPWITFKDACNVRSPQQHAGVVHSSNLCTEITLNTSDTETAVCNLGSV 604
Query: 450 ALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVET 509
L +++ K+ D EKL + + L+ +ID+NYY V
Sbjct: 605 NLLQHI--------------------KDGQIDHEKLKKTITVAMRMLDNVIDINYYAVNK 644
Query: 510 ARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAARE 569
AR SNLRHRP+G+GV D+ L +P+ S EA + E I Y+A S+E+A
Sbjct: 645 ARDSNLRHRPVGLGVMAFQDSLYALRIPYASQEAVEFADKSMEAICYYAYWASTELAKER 704
Query: 570 GPYETYHGSPVSKGILQPDMWG-----------VNPSDRWDWGGLRDMISKNGVRNSLLV 618
G Y +Y GS +GIL D V+ S DW LR I+++G+RNS V
Sbjct: 705 GQYSSYKGSLWDRGILPFDTLDMLAKARGGYVEVDRSSTMDWDALRKKIAQDGMRNSNCV 764
Query: 619 APMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKI 678
A PTA+ S I+G + EP N+ + LSGEF V+N L+ DL +GLW ++ +
Sbjct: 765 AIAPTATISNIIGVDASIEPSFGNLSVKSNLSGEFTVINSGLVRDLKRLGLWDDVMIMDL 824
Query: 679 IYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGK 738
+ GS+ I ++P+++KA+Y T +E++ + LV+ A R +ID +QSLNI+M + K
Sbjct: 825 KHFKGSLHPIDRVPQDIKALYSTAFEVEPQWLVEAASRRQKWIDQAQSLNIYMAGASGKK 884
Query: 739 LTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVL 776
L + AW+RGLKT YYLR+++A TV+T L
Sbjct: 885 LDDTYKLAWVRGLKT-TYYLRTQSATHVEMSTVNTRQL 921
>gi|187479452|ref|YP_787477.1| ribonucleotide-diphosphate reductase subunit alpha [Bordetella
avium 197N]
gi|115424039|emb|CAJ50592.1| ribonucleoside-diphosphate reductase alpha chain [Bordetella avium
197N]
Length = 970
Score = 533 bits (1372), Expect = e-148, Method: Compositional matrix adjust.
Identities = 308/792 (38%), Positives = 447/792 (56%), Gaps = 48/792 (6%)
Query: 4 VKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAET 63
V +G + + ++ A ++ GL+ E D + ++ +Y GV ++ + A
Sbjct: 154 VNDNGVRRPLDMAQLRATIEAAGVGLT-EFIDTETILKETVKNLYDGVPVDEVFKSAILA 212
Query: 64 AAAMTTNHPDYASLAARIVVSNLHKN------TKKSFSETIKDMYNHYNERSGLKAPLIA 117
A A+ P Y+ + AR+++ + K ++ S +E + + +R G++A L+
Sbjct: 213 ARALVEKDPAYSQVTARLLLHTIRKEVLGEEVSQASMAERYATYFPTFIQR-GIEAGLLD 271
Query: 118 DDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAVG 177
+ + ++ AR + +RD + Y G +TL Y L V+G +E PQ MRVA+G
Sbjct: 272 AKLAEFDLERIAR---ALNANRDLQFGYLGLQTLYDRYFLHVRGTRIELPQVFFMRVAMG 328
Query: 178 IHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
+ + D AI+ Y ++S F ++PTLFN+GT +QLSSC+L + DD +EGIYD
Sbjct: 329 LALRESDREARAIEFYEILSSFDFMSSTPTLFNSGTLHSQLSSCYLTTVSDD-LEGIYDA 387
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+KE A+++K AGG+G +RA S+I+GTNG S G+VP L+V NDTA V+QGG KRK
Sbjct: 388 IKENALLAKYAGGLGNDWTPVRALRSHIKGTNGESQGVVPFLKVVNDTAVAVNQGG-KRK 446
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA YLE WH DI EFL+LRKN G E R D+ A W+PDLFM+RV NG W+LF P+
Sbjct: 447 GAVCTYLETWHLDIEEFLELRKNTGDERRRTHDMNTANWIPDLFMKRVVENGDWTLFSPS 506
Query: 355 EAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQIETGTPYMLFKD 409
+ P L D +G FE+ Y YE E K K + A +LW ++L ETG P++ FKD
Sbjct: 507 DCPDLHDKYGRAFEQAYLGYEAKAASGELKLFKKMPAISLWRKMLSMLFETGHPWITFKD 566
Query: 410 TCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKL 469
CN +S QQ++G + SSNLCTE+ T+ +E AVCNL S+ L +++ PS
Sbjct: 567 PCNIRSPQQHIGVVHSSNLCTEITLNTNESEIAVCNLGSVNLVAHMK---------PSAN 617
Query: 470 VGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
G D +K+ GI L+ +ID+NYY VE AR SNLRHRP+G+G+ G D
Sbjct: 618 GGYE------LDHDKIKHTVGIAMRMLDNVIDINYYAVEKARNSNLRHRPVGLGIMGFQD 671
Query: 530 TFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPDM 589
++ +P+ S A + E + Y A SS +A G Y +Y GS S+GIL D
Sbjct: 672 CLHMMRVPYASQAAIEFADRSMEAVCYQAYWASSTLAEERGRYPSYEGSLWSRGILPQDS 731
Query: 590 WG-----------VNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
V+ S DW LR I +G+RNS VA PTA+ S I+G + C EP
Sbjct: 732 IAMLRDERGGNVDVDESSSLDWDTLRARIKAHGMRNSNCVAIAPTATISNIIGVSACIEP 791
Query: 639 YTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAI 698
N+Y + LSGEF VVN +L+ DL ++GLW ++ + Y DGS+ +I ++P EL+ +
Sbjct: 792 TFQNLYVKSNLSGEFTVVNDYLVRDLKKLGLWDEVMVADLKYFDGSLSRIDRVPTELREL 851
Query: 699 YKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYL 758
Y T +E++ LV+ A R +ID +QSLNI+M + KL + AW RGLKT YYL
Sbjct: 852 YATAFEVEPSWLVECAARRQKWIDQAQSLNIYMAGASGKKLDDTYKLAWQRGLKT-TYYL 910
Query: 759 RSRAAADAIKFT 770
R+ A A K T
Sbjct: 911 RTMGATSAEKST 922
>gi|169634185|ref|YP_001707921.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii SDF]
gi|169152977|emb|CAP02025.1| ribonucleoside diphosphate reductase, alpha subunit [Acinetobacter
baumannii]
Length = 943
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 316/851 (37%), Positives = 464/851 (54%), Gaps = 75/851 (8%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
+ V +G+ + + + A + + + GL E D + + +Y GV S +
Sbjct: 122 LQVTDANGQLQPLDLSALQATVNRAAEGL--EGIDVQAIIDETVKNLYNGVKESDIATTM 179
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSF----SETIKDMYNHYNERSGLKAPLI 116
P+Y + AR++ L +T +F ++T ++ + G++ L+
Sbjct: 180 MMATRTRIEQEPNYTYVTARLLRDEL-VSTGLAFLGLPADTAENNALEAFLKKGVELDLL 238
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAV 176
+ D+ ++ +L + I +R + Y G +TL Y + G E PQ MRV++
Sbjct: 239 SPDLLKFDLE---KLAAAIQPERSNQFTYLGLQTLFDRYFIHSNGVRFELPQLFFMRVSM 295
Query: 177 GI---HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYD 233
G+ +D + AI+ Y+++S + ++PTLFN+GT R QLSSC+L + DD + IY
Sbjct: 296 GLALNEQDKEERAIEFYNLLSSFDYMASTPTLFNSGTLRPQLSSCYLTTIGDD-LYDIYG 354
Query: 234 TLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKR 293
+++ A++SK AGG+G +RA SYI+GTNG S G+VP L+V NDTA V+QGG KR
Sbjct: 355 AMRDNAMLSKWAGGLGNDWTPVRALNSYIKGTNGKSQGVVPFLKVANDTAVAVNQGG-KR 413
Query: 294 KGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCP 353
KGA YLE WH DI EFL+LRKN G + R D+ A WVPDLFM+RV +G W+LF P
Sbjct: 414 KGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWVPDLFMQRVFEDGEWTLFTP 473
Query: 354 NEAPGLADCWGTEFERLYTKYEKEGKAK----KVVQAQNLWFEILKSQIETGTPYMLFKD 409
+E P L D G EF Y YE K + K V+A++LW ++L ETG P++ FKD
Sbjct: 474 SETPDLHDLTGAEFAERYAYYESVAKEQNMLHKKVRAKDLWRKMLSMLFETGHPWITFKD 533
Query: 410 TCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKL 469
CN +S QQ++G + SSNLCTE+ T+ E AVCNL SI L ++V
Sbjct: 534 VCNLRSPQQHVGVVHSSNLCTEITLNTNQDEIAVCNLGSINLVQHV-------------- 579
Query: 470 VGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
K D EKLA L+ +ID+NYY V A+ SNL+HRP+G+G+ G D
Sbjct: 580 ------KGGVLDREKLARTVKTAVRMLDNVIDINYYAVPQAKNSNLKHRPVGMGIMGFQD 633
Query: 530 TFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPD- 588
+GM + S EA + + E I Y+A++TSS++A G Y T+ GS +GIL D
Sbjct: 634 ALYEMGMAYGSDEAVKFADESMEVISYYAIQTSSDLAVERGAYSTFKGSLWDQGILPIDS 693
Query: 589 -----------MWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFE 637
M+ V+ + R DW LR + K+G+RNS ++A PTA+ S I G ++ E
Sbjct: 694 LEIVAKSRPERMFEVDRTQRLDWDSLRAKVQKDGMRNSNVMAIAPTATISNICGVSQSIE 753
Query: 638 PYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKA 697
P N+Y + LSGEF V+N L+ L E GLW ++ N + + +GSVQKI +IPEELKA
Sbjct: 754 PTFQNLYVKSNLSGEFTVINPCLVRALKERGLWDTVMVNDLKHFEGSVQKIARIPEELKA 813
Query: 698 IYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYY 757
I+ T +E++ + +VD A R +ID +QSLN+++ N KL + AWLRGLKT YY
Sbjct: 814 IFATAFEVEPRWIVDAASRRQKWIDQAQSLNLYISGANGKKLDITYKMAWLRGLKT-TYY 872
Query: 758 LRSRAAADAIKFTVDTSVLK-------------------ENPKVTDDD---DAKMAQMVC 795
LR+ A A K T++T L + P+ ++D A M C
Sbjct: 873 LRALGATSAEKSTINTGALNAVKPATVEAAPAVAPVVEAKKPEAVEEDGFTQAAPVPMAC 932
Query: 796 SLTNREECMAC 806
S+ N +C AC
Sbjct: 933 SIDN-PDCEAC 942
>gi|384082548|ref|ZP_09993723.1| ribonucleotide-diphosphate reductase subunit alpha [gamma
proteobacterium HIMB30]
Length = 957
Score = 532 bits (1371), Expect = e-148, Method: Compositional matrix adjust.
Identities = 313/833 (37%), Positives = 466/833 (55%), Gaps = 55/833 (6%)
Query: 3 VVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAE 62
+VK DG +E + ++ + + GL+ D V Q+ +Y GVT +
Sbjct: 150 IVKEDGSKEPLDVGRLKTVIAEACDGLT--DVDGETVLQETLKNLYDGVTQHDVSTALIM 207
Query: 63 TAAAMTTNHPDYASLAARIVVSNLHKN--TKKSFSETIKDMYNHYNERSGLKAPL---IA 117
+A M P+Y + AR+++ ++ T+ + +E LKA L +
Sbjct: 208 SARTMVEKEPNYTYVTARLLLDDIRAKALTRLNVAEKATQFEMESLYPMALKAFLELAVE 267
Query: 118 DDVY--DIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVA 175
++ D++ + R+ +I +RD + Y G +TL Y + +E PQ MR+A
Sbjct: 268 SELVSKDLLEYDLDRMAGALIAERDNQFTYLGLQTLYDRYFIHKDDVRIELPQVFFMRIA 327
Query: 176 VGI---HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIY 232
+G+ ++ + AI+ Y ++S + ++PTLFN+GT R+QLSSC+L + D+ ++GIY
Sbjct: 328 MGLALREENREERAIEFYQLLSSFDYMASTPTLFNSGTLRSQLSSCYLTTVPDN-LDGIY 386
Query: 233 DTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGK 292
+++ A++SK AGG+G +RA GSYI+GTNG S G+VP L+V NDTA V+QGG K
Sbjct: 387 GAIRDNAMLSKWAGGLGNDWTPVRALGSYIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-K 445
Query: 293 RKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFC 352
RKGA YLE WH DI EFL+LRKN G + R D+ A WVPDLFM+RV + W+LF
Sbjct: 446 RKGAVCAYLETWHMDIEEFLELRKNTGDDRRRTHDMNSANWVPDLFMKRVFEDAEWTLFS 505
Query: 353 PNEAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQIETGTPYMLF 407
P+ P L D +G FE Y +YE E K K VQA++LW ++L ETG P++ F
Sbjct: 506 PSTCPDLHDLFGLAFENRYKEYEAMTQTGEIKHFKRVQAKDLWRKMLSMLFETGHPWITF 565
Query: 408 KDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPS 467
KD CN +S QQ+ G + SSNLCTE+ TS E AVCNL S+ L ++V
Sbjct: 566 KDACNLRSPQQHAGVVHSSNLCTEITLNTSVDEIAVCNLGSVNLRQHV------------ 613
Query: 468 KLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
+K+ D EKLA+ L+ +ID+NYY V A SN++HRP+G+G+ G
Sbjct: 614 -------TKDGGLDREKLAKTVKTAVRMLDNVIDINYYAVPQAENSNMKHRPVGLGIMGF 666
Query: 528 ADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQP 587
D LG+P+ S EA Q + E I Y+A+ S+++A G Y ++ GS S+G+L
Sbjct: 667 QDALYELGIPYGSDEAVQFADESMEVISYYAIDASADLARERGAYSSFDGSLWSQGVLPI 726
Query: 588 D------------MWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNEC 635
D V+ S + DW LR+ +K+G+RNS ++A PTA+ + I G ++
Sbjct: 727 DSIEKLREERGANYLNVDTSAQLDWTELREK-AKDGMRNSNVMAIAPTATIANITGVSQS 785
Query: 636 FEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEEL 695
EP N+Y + LSGEF VVN +L+ DL E GLW ++ N + Y DGSVQ++ +IP++L
Sbjct: 786 IEPTYQNLYVKSNLSGEFTVVNPYLVRDLKERGLWDNVMVNDLKYYDGSVQQVARIPDDL 845
Query: 696 KAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGM 755
KA+Y T +E++ + +V+ A R +ID +QSLNI++ N KL + AW GLKT
Sbjct: 846 KALYATSFELETRWIVEAAARRQKWIDQAQSLNIYIANANGKKLDVTYRMAWFSGLKT-T 904
Query: 756 YYLRSRAAADAIKFTVDTSVLKENPKVTDDDDAKMAQM--VCSLTNREECMAC 806
YYLR+ A A K T++ S L A+ A + CSL + +C AC
Sbjct: 905 YYLRALGATQAEKSTINKSNLNAVSATQATQAAEPAAVPKACSLDD-PDCEAC 956
>gi|296135013|ref|YP_003642255.1| ribonucleoside-diphosphate reductase subunit alpha [Thiomonas
intermedia K12]
gi|295795135|gb|ADG29925.1| ribonucleoside-diphosphate reductase, alpha subunit [Thiomonas
intermedia K12]
Length = 978
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 303/772 (39%), Positives = 441/772 (57%), Gaps = 63/772 (8%)
Query: 47 VYKGVTTSQLDELAAETAAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETI--KDMYNH 104
+Y GV ++ + + + + PDY+ + AR++ LH +++ +E I + M
Sbjct: 196 LYDGVPMLEVYKASILASRTLIERDPDYSKVTARLL---LHTMRRETLNEDIPQEQMTQR 252
Query: 105 YNE------RSGLKAPLIADDV--YDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYL 156
Y E + G++ L+ + + +D+ ARL + + +RD +DY G +TL Y
Sbjct: 253 YAEYFPRCIKEGVELELLDERLGQFDL-----ARLGAALKAERDLQFDYLGLQTLYDRYF 307
Query: 157 LKVQ--------GKVVERPQHMLMRVAVGIHKDDIDS---AIKTYHMMSQRWFTHASPTL 205
L + G+ +E PQ MRVA+G+ ++ID AI+ Y ++S F ++PTL
Sbjct: 308 LANRADTRVNKDGRRIELPQAFFMRVAMGLSLNEIDREARAIEFYELLSSFDFMSSTPTL 367
Query: 206 FNAGTPRAQLSSCFLVCMKDDSIEGIYDTLKECAIISKSAGGIGVSVHNIRATGSYIRGT 265
FNAGT R+QLSSC+L + DD ++GIY+ +KE A++SK AGG+G +RA GS+I+GT
Sbjct: 368 FNAGTRRSQLSSCYLTTVADD-LDGIYEAIKENALLSKFAGGLGNDWTRVRALGSHIKGT 426
Query: 266 NGTSNGIVPMLRVFNDTARYVDQGGGKRKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRA 325
NG S G+VP L+V NDTA V+QGG KRKGA YLE WH DI EFL+LRKN G + R
Sbjct: 427 NGKSQGVVPFLKVVNDTAVAVNQGG-KRKGAVCAYLETWHLDIEEFLELRKNTGDDRRRT 485
Query: 326 RDLFYALWVPDLFMERVQSNGLWSLFCPNEAPGLADCWGTEFERLYTKYEK-----EGKA 380
D+ A WVPDLFM+RV G W+LF P + P L D +G +FE+ YT+YE+ E K
Sbjct: 486 HDMNTANWVPDLFMKRVMEGGEWTLFSPADVPDLHDKFGKDFEQAYTRYEQKAALGEIKL 545
Query: 381 KKVVQAQNLWFEILKSQIETGTPYMLFKDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTE 440
K + A LW ++L ETG P++ FKD CN +S QQ++G + SSNLCTE+ T+ +E
Sbjct: 546 FKTLPAVQLWRKMLSMLFETGHPWITFKDACNVRSPQQHVGVVHSSNLCTEITLNTNESE 605
Query: 441 TAVCNLASIALPRYVREMGVPMESHPSKLVGSRGSKNRYFDFEKLAEVTGIVTENLNKII 500
AVCNL S+ L ++++ + G+K D KL L+ +I
Sbjct: 606 IAVCNLGSVNLVAHLKD-------------AADGAK--VIDQAKLKRTIQTAMRMLDNVI 650
Query: 501 DVNYYPVETARRSNLRHRPIGIGVQGLADTFILLGMPFDSTEAQQLNKDIFETIYYHALR 560
D+NYY V AR +N++HRP+G+G+ G D L +P+ S +A + E + Y A
Sbjct: 651 DINYYAVAKARNANMKHRPVGLGIMGFQDCLYQLRIPYGSQQAVEFADRSMEAVCYEAYW 710
Query: 561 TSSEIAAREGPYETYHGSPVSKGILQPDMWGV-----------NPSDRWDWGGLRDMISK 609
SSE+A G Y +Y GS +GIL D + + S DW LR I++
Sbjct: 711 ASSELARERGRYSSYGGSLWDQGILPMDSLKLLAEQRGGYVEADTSSTLDWNALRAQIAQ 770
Query: 610 NGVRNSLLVAPMPTASTSQILGNNECFEPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGL 669
+G+RNS VA PTA+ S I+G + C EP N+Y + LSGEF V+N++L+ DL GL
Sbjct: 771 HGMRNSNCVAIAPTATISNIVGVDACIEPTFQNLYVKSNLSGEFTVINQYLVRDLKARGL 830
Query: 670 WSPIIKNKIIYDDGSVQKIPQIPEELKAIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNI 729
W ++ + Y DGS Q+I +IP +LKA+Y T +E + +++ A R +ID +QSLNI
Sbjct: 831 WDAVMVADLKYFDGSTQRIDRIPADLKALYATAFETDTQWIIEAAARRQKWIDQAQSLNI 890
Query: 730 HMDQPNFGKLTSLHFHAWLRGLKTGMYYLRSRAAADAIKFTVDTSVLKENPK 781
+M + L + AWLRGLKT YYLR+ A A K TV L P+
Sbjct: 891 YMANASGKLLDDTYKLAWLRGLKT-TYYLRTIGATHAEKSTVKAGQLNAVPQ 941
>gi|126640805|ref|YP_001083789.1| ribonucleotide-diphosphate reductase subunit alpha [Acinetobacter
baumannii ATCC 17978]
Length = 885
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 316/852 (37%), Positives = 464/852 (54%), Gaps = 76/852 (8%)
Query: 1 MYVVKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELA 60
+ V +G+ + + + A + + + GL E D + + +Y GV S +
Sbjct: 63 LQVTDANGQLQPLDLSALQATVNRAAEGL--EGIDVQAIIDETVKNLYNGVKESDIATTM 120
Query: 61 AETAAAMTTNHPDYASLAARIVVSNLHKNTKKSF----SETIKDMYNHYNERSGLKAPLI 116
P+Y + AR++ L +T +F ++T ++ + G++ L+
Sbjct: 121 MMATRTRIEQEPNYTYVTARLLRDEL-VSTGLAFLGLPADTAENNALEAFLKKGVELDLL 179
Query: 117 ADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVAV 176
+ D+ ++ +L + I +R + Y G +TL Y + G E PQ MRV++
Sbjct: 180 SPDLLKFDLE---KLAAAIQPERSNQFTYLGLQTLFDRYFIHSNGVRFELPQLFFMRVSM 236
Query: 177 GI---HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYD 233
G+ +D + AI+ Y+++S + ++PTLFN+GT R QLSSC+L + DD + IY
Sbjct: 237 GLALNEQDKEERAIEFYNLLSSFDYMASTPTLFNSGTLRPQLSSCYLTTIGDD-LYDIYG 295
Query: 234 TLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKR 293
+++ A++SK AGG+G +RA SYI+GTNG S G+VP L+V NDTA V+QGG KR
Sbjct: 296 AMRDNAMLSKWAGGLGNDWTPVRALNSYIKGTNGKSQGVVPFLKVANDTAVAVNQGG-KR 354
Query: 294 KGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCP 353
KGA YLE WH DI EFL+LRKN G + R D+ A WVPDLFM+RV +G W+LF P
Sbjct: 355 KGAVCAYLETWHLDIEEFLELRKNTGDDRRRTHDMNTANWVPDLFMQRVFEDGEWTLFTP 414
Query: 354 NEAPGLADCWGTEFERLYTKYEKEGKAK----KVVQAQNLWFEILKSQIETGTPYMLFKD 409
+E P L D G EF Y YE K + K V+A++LW ++L ETG P++ FKD
Sbjct: 415 SETPDLHDLTGAEFAERYAYYESVAKEQNMLHKKVRAKDLWRKMLSMLFETGHPWITFKD 474
Query: 410 TCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKL 469
CN +S QQ++G + SSNLCTE+ T+ E AVCNL SI L ++V
Sbjct: 475 VCNLRSPQQHVGVVHSSNLCTEITLNTNQDEIAVCNLGSINLVQHV-------------- 520
Query: 470 VGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
K D EKLA L+ +ID+NYY V A+ SNL+HRP+G+G+ G D
Sbjct: 521 ------KGGVLDREKLARTVKTAVRMLDNVIDINYYAVPQAKNSNLKHRPVGMGIMGFQD 574
Query: 530 TFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQPD- 588
+GM + S EA + E I Y+A++TSS++A G Y T+ GS +GIL D
Sbjct: 575 ALYEMGMAYGSDEAVNFADESMEVISYYAIQTSSDLAVERGAYSTFKGSLWDQGILPIDS 634
Query: 589 -----------MWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFE 637
M+ V+ + R DW LR + K+G+RNS ++A PTA+ S I G ++ E
Sbjct: 635 LEIVAKSRPERMFEVDRTQRLDWDSLRAKVQKDGMRNSNVMAIAPTATISNICGVSQSIE 694
Query: 638 PYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKA 697
P N+Y + LSGEF V+N +L+ L E GLW ++ N + + +GSVQKI +IPEELKA
Sbjct: 695 PTFQNLYVKSNLSGEFTVINPYLVRALKERGLWDTVMVNDLKHFEGSVQKIARIPEELKA 754
Query: 698 IYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYY 757
I+ T +E++ + +VD A R +ID +QSLN+++ N KL + AWLRGLKT YY
Sbjct: 755 IFATAFEVEPRWIVDAASRRQKWIDQAQSLNLYISGANGKKLDITYKMAWLRGLKT-TYY 813
Query: 758 LRSRAAADAIKFTVDTSVLK--------------------ENPKVTDDD---DAKMAQMV 794
LR+ A A K T++T L + P+ ++D A M
Sbjct: 814 LRALGATSAEKSTINTGALNAVKPATVEAAAPAAAPVVEAKKPEAVEEDGFTQAAPVPMA 873
Query: 795 CSLTNREECMAC 806
CS+ N +C AC
Sbjct: 874 CSIDN-PDCEAC 884
>gi|409408950|ref|ZP_11257385.1| ribonucleoside reductase large subunit [Herbaspirillum sp. GW103]
gi|386432272|gb|EIJ45100.1| ribonucleoside reductase large subunit [Herbaspirillum sp. GW103]
Length = 994
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 309/815 (37%), Positives = 448/815 (54%), Gaps = 59/815 (7%)
Query: 4 VKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAET 63
V DG+ + +++ + + GL H D + + +Y GV +L + A
Sbjct: 158 VTEDGQSRPLDINEVRSLIAAACVGLDA-HVDAEAILAETVKNLYDGVPVEELYKSAILA 216
Query: 64 AAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIK--DMYNHYNE------RSGLKAPL 115
A A+ P Y+ + +R++ +H K+ F + + D Y E + G+ A L
Sbjct: 217 ARALMEKDPAYSQVTSRLL---MHTIRKEVFGKEVAQADAPAEYLEYFPQYIKKGIDAEL 273
Query: 116 IADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVA 175
+ + + A+L + + +RD + Y G +TL Y L + G +E PQ MRVA
Sbjct: 274 LDTKLAQF---DLAKLAAALKPERDLQFGYIGLQTLYDRYFLHIGGTRIEMPQAFYMRVA 330
Query: 176 VGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIY 232
+G+ ++ID AI+ Y ++S F ++PTLFN+GT R+QLSSC+L + DD ++GIY
Sbjct: 331 MGLALNEIDRETRAIEFYDLLSSFDFMSSTPTLFNSGTQRSQLSSCYLTTVADD-LDGIY 389
Query: 233 DTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGK 292
+ +KE A+++K AGG+G +RA G++I+GTNG S G+VP L+V NDTA V+QGG K
Sbjct: 390 EAIKENALLAKFAGGLGNDWTPVRALGAHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-K 448
Query: 293 RKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFC 352
RKGA YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV G W+LF
Sbjct: 449 RKGAVCAYLETWHMDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEKGEWTLFS 508
Query: 353 PNEAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQIETGTPYMLF 407
P++ P L D +G FE YT YE E K K VQA +LW ++L ETG P++ F
Sbjct: 509 PSDTPDLHDKFGRAFEEAYTAYEAKAARGELKLFKKVQANDLWRKMLSMLFETGHPWITF 568
Query: 408 KDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPS 467
KD CN +S QQ++G + SSNLCTE+ T+ +E AVCNL S+ LP ++
Sbjct: 569 KDPCNIRSPQQHVGVVHSSNLCTEITLNTNESEIAVCNLGSVNLPAHL------------ 616
Query: 468 KLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
N D KL + L+ +ID+NYY V+ AR SNLRHRP+G+G+ G
Sbjct: 617 --------VNGELDHAKLQKTIRTAMRMLDNVIDINYYAVKKARDSNLRHRPVGMGIMGF 668
Query: 528 ADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQP 587
D + +P+ S +A + E + Y+A S+E+A G Y +Y GS +GIL
Sbjct: 669 QDCLHIKRVPYASMDAVEFADRSMEAVCYYAYMASTELAEERGRYASYRGSLWDRGILPQ 728
Query: 588 DMWGVNPSDR-----------WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
D + +R DW LR I+++G+RNS VA PTA+ S I+G + C
Sbjct: 729 DSLKLLAQERGGYLETDTTETLDWAALRARIAEHGMRNSNCVAIAPTATISNIIGVSACI 788
Query: 637 EPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELK 696
EP N+Y + LSGEF +N++L+ DL GLW ++ + Y DGS+ KI +IP++L+
Sbjct: 789 EPTYQNLYVKSNLSGEFTEINEYLVRDLKARGLWDEVMVADLKYFDGSLAKIDRIPQDLR 848
Query: 697 AIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMY 756
IY T +E+ LV+ A R +ID +QSLNI+M + +L + AWLRGLKT Y
Sbjct: 849 DIYATAFEVDPSWLVEAASRRQKWIDQAQSLNIYMAGASGKRLDETYKLAWLRGLKT-TY 907
Query: 757 YLRSRAAADAIKFTVDTSVLKENPKVTDDDDAKMA 791
YLR+ A K T L N D MA
Sbjct: 908 YLRTIGATHTEKSTSRAGAL--NAVAVDGGAGSMA 940
>gi|268316002|ref|YP_003289721.1| ribonucleoside-diphosphate reductase subunit alpha [Rhodothermus
marinus DSM 4252]
gi|262333536|gb|ACY47333.1| ribonucleoside-diphosphate reductase, alpha subunit [Rhodothermus
marinus DSM 4252]
Length = 926
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 314/834 (37%), Positives = 459/834 (55%), Gaps = 60/834 (7%)
Query: 5 KRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAETA 64
+ DG + + + AR++ GL + DP LV +++ VY G+ +LD A
Sbjct: 120 RADGTEAPFPHEALRARIEAACDGL--DDVDPELVREELLRTVYPGIPEDELDRALILAA 177
Query: 65 AAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIKDMYNHYNERSGLKAPLIAD------ 118
PDY +AAR+++ L++ F I R+G +A L
Sbjct: 178 RTHIEREPDYTYVAARLLLDALYREV---FGRPIPPSEQAEACRAGFRAYLEHGVRLGRL 234
Query: 119 DVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLL-KVQGKVVERPQHMLMRVAVG 177
D + + RL + + +RD + + G +TL YLL + +G+ E PQ++ MRVA+G
Sbjct: 235 DERLLRTFDIDRLAAALHPERDRRFTFLGLQTLYDRYLLHEPEGRRFELPQYLWMRVAMG 294
Query: 178 I---HKDDIDSAIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIYDT 234
+ D AI+ Y ++S F +++PTLFNAGTP QLSSC+L ++DD + I+
Sbjct: 295 LALAEDDPTARAIQFYELLSSFRFMNSTPTLFNAGTPHPQLSSCYLTTVQDD-LGAIFKA 353
Query: 235 LKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGKRK 294
+++ A++SK AGG+G +RA G++IRGTNG S G++P L++ NDTA V+QGG KRK
Sbjct: 354 IRDNALLSKWAGGLGNDWTPVRALGAHIRGTNGRSQGVIPFLKIVNDTAVAVNQGG-KRK 412
Query: 295 GAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFCPN 354
GA YLE WH DI EFL+LR+N G E R D+ A W+PDLFM+RV+ W+LF P+
Sbjct: 413 GAVCAYLEVWHLDIEEFLELRRNTGDERRRTHDMNTACWIPDLFMQRVRERKHWTLFSPD 472
Query: 355 EAPGLADCWGTEFERLYTKYEKEGKAKKV-----VQAQNLWFEILKSQIETGTPYMLFKD 409
E P L D +G F Y YE+E +A ++ ++A LW ++L ETG P++ FKD
Sbjct: 473 EVPDLHDLYGRAFRERYEHYEREAEAGRIRNWRRIEAVALWRKMLSMLFETGHPWLTFKD 532
Query: 410 TCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPSKL 469
CN +S Q ++G + SSNLCTE+ TSP E AVCNL SI L +V E G
Sbjct: 533 PCNIRSPQDHVGVVHSSNLCTEITLNTSPEEVAVCNLGSINLVAHVDEQG---------- 582
Query: 470 VGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGLAD 529
D EKL + L+ +ID+N+YP+ AR SNLRHRPIG+G+ G D
Sbjct: 583 ---------ELDREKLRDTIRTAVRMLDNVIDLNFYPIPEARTSNLRHRPIGLGLMGFQD 633
Query: 530 TFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGIL---- 585
G+ + S A +L + E I Y A SS++AA G Y T+ GS +G+L
Sbjct: 634 VLYRRGLSYASEAAVELADEFMEFIAYCAYEASSDLAAERGAYPTFKGSKWDRGLLPLDT 693
Query: 586 -------QPDMWGVNPSDRWDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECFEP 638
+ + V + R DW LR+ I + G+RNS ++A PTA+ + I G + EP
Sbjct: 694 LDLLEAERGEPVPVPRTARLDWDALREKIRRQGMRNSNVLAIAPTATIANICGVSPSIEP 753
Query: 639 YTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELKAI 698
N+Y + LSGEF +N +L+ DL GLW + + + Y DGSVQ+I +IP ELKA
Sbjct: 754 TYKNLYVKSNLSGEFTQLNPYLVRDLKARGLWDKEMLDDLKYYDGSVQEIDRIPPELKAR 813
Query: 699 YKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMYYL 758
Y+T +EI+ + L++ A R +ID SQSLN+++ +P+ KL+ ++ AW GLKT YYL
Sbjct: 814 YRTAFEIEPRWLIECAARRQKWIDQSQSLNLYLAEPSGRKLSEMYQLAWQLGLKT-TYYL 872
Query: 759 RSRAAADAIKFTVDTSVLKENPK------VTDDDDAKMAQMVCSLTNREECMAC 806
R+ AA K T+D + P+ + D + CS + E C AC
Sbjct: 873 RALAATQIEKSTLDINRRGIQPRWMKSRSPSSDIVVRRDGPACS-PDDESCEAC 925
>gi|415955521|ref|ZP_11557459.1| ribonucleoside reductase large subunit, partial [Herbaspirillum
frisingense GSF30]
gi|407757023|gb|EKF67094.1| ribonucleoside reductase large subunit, partial [Herbaspirillum
frisingense GSF30]
Length = 871
Score = 531 bits (1369), Expect = e-148, Method: Compositional matrix adjust.
Identities = 311/815 (38%), Positives = 447/815 (54%), Gaps = 59/815 (7%)
Query: 4 VKRDGKQEAVHFDKITARLKKLSYGLSIEHCDPVLVSQKVCTGVYKGVTTSQLDELAAET 63
V DG+ + ++ A + GL H D + + +Y GV +L + A
Sbjct: 35 VTEDGQSRPLEIAEVRALIDAACVGLD-GHVDADAILAETVKNLYDGVPVEELYKSAILA 93
Query: 64 AAAMTTNHPDYASLAARIVVSNLHKNTKKSFSETIK--DMYNHYNE------RSGLKAPL 115
A A+ P Y+ + +R++ +H K+ F + + D Y E + G+ A L
Sbjct: 94 ARALMEKDPAYSQVTSRLL---MHTIRKEVFGKEVAQADAPAEYLEYFPQYVKKGIDAEL 150
Query: 116 IADDVYDIIMKNAARLDSEIIYDRDFDYDYFGFKTLERSYLLKVQGKVVERPQHMLMRVA 175
+ + + A+L + I +RD + Y G +TL Y L + G +E PQ MRVA
Sbjct: 151 LDTKLAQF---DLAKLAAAIKPERDLQFGYIGLQTLYDRYFLHISGTRIEMPQAFYMRVA 207
Query: 176 VGIHKDDIDS---AIKTYHMMSQRWFTHASPTLFNAGTPRAQLSSCFLVCMKDDSIEGIY 232
+G+ ++ID AI+ Y ++S F ++PTLFN+GT R+QLSSC+L + DD ++GIY
Sbjct: 208 MGLALNEIDREARAIEFYDLLSSFDFMSSTPTLFNSGTLRSQLSSCYLTTVADD-LDGIY 266
Query: 233 DTLKECAIISKSAGGIGVSVHNIRATGSYIRGTNGTSNGIVPMLRVFNDTARYVDQGGGK 292
+ +KE A+++K AGG+G +RA G++I+GTNG S G+VP L+V NDTA V+QGG K
Sbjct: 267 EAIKENALLAKFAGGLGNDWTPVRALGAHIKGTNGKSQGVVPFLKVVNDTAVAVNQGG-K 325
Query: 293 RKGAFAVYLEPWHADIFEFLDLRKNHGKEEHRARDLFYALWVPDLFMERVQSNGLWSLFC 352
RKGA YLE WH DI EFL+LRKN G + R D+ A W+PDLFM+RV G W+LF
Sbjct: 326 RKGAVCAYLETWHMDIEEFLELRKNTGDDRRRTHDMNTANWIPDLFMKRVMEKGEWTLFS 385
Query: 353 PNEAPGLADCWGTEFERLYTKYEK-----EGKAKKVVQAQNLWFEILKSQIETGTPYMLF 407
P++ P L D +G FE YT YE E K K VQA +LW ++L ETG P++ F
Sbjct: 386 PSDTPDLHDKFGRAFEEAYTGYEAKAARGELKLFKKVQANDLWRKMLSMLFETGHPWITF 445
Query: 408 KDTCNKKSNQQNLGTIKSSNLCTEVIQYTSPTETAVCNLASIALPRYVREMGVPMESHPS 467
KD CN +S QQ++G + SSNLCTE+ T+ +E AVCNL S+ LP ++
Sbjct: 446 KDPCNIRSPQQHVGVVHSSNLCTEITLNTNDSEIAVCNLGSVNLPAHL------------ 493
Query: 468 KLVGSRGSKNRYFDFEKLAEVTGIVTENLNKIIDVNYYPVETARRSNLRHRPIGIGVQGL 527
N D KL + L+ +ID+NYY V+ AR SNLRHRP+G+G+ G
Sbjct: 494 --------VNGELDHAKLQKTIRTAMRMLDNVIDINYYAVKKARDSNLRHRPVGMGIMGF 545
Query: 528 ADTFILLGMPFDSTEAQQLNKDIFETIYYHALRTSSEIAAREGPYETYHGSPVSKGILQP 587
D + +P+ S +A + E + Y+A S+E+A G Y +Y GS +GIL
Sbjct: 546 QDCLHIKRVPYASMDAVEFADRSMEAVCYYAYMASTELAEERGRYASYRGSLWDRGILPQ 605
Query: 588 DMWGVNPSDR-----------WDWGGLRDMISKNGVRNSLLVAPMPTASTSQILGNNECF 636
D + +R DW LR I+++G+RNS VA PTA+ S I+G + C
Sbjct: 606 DSLKLLAQERGGYLETDTTETLDWAALRARIAEHGMRNSNCVAIAPTATISNIIGVSACI 665
Query: 637 EPYTSNIYSRRVLSGEFVVVNKHLLHDLTEMGLWSPIIKNKIIYDDGSVQKIPQIPEELK 696
EP N+Y + LSGEF +N++L+ DL GLW ++ + Y DGS+ KI +IP++L+
Sbjct: 666 EPTYQNLYVKSNLSGEFTEINEYLVRDLKARGLWDEVMVADLKYFDGSLAKIDRIPQDLR 725
Query: 697 AIYKTVWEIKQKTLVDMAVDRGCYIDHSQSLNIHMDQPNFGKLTSLHFHAWLRGLKTGMY 756
IY T +E+ LV+ A R +ID +QSLNI+M + +L + AWLRGLKT Y
Sbjct: 726 DIYATAFEVDPSWLVEAASRRQKWIDQAQSLNIYMAGASGKRLDETYKLAWLRGLKT-TY 784
Query: 757 YLRSRAAADAIKFTVDTSVLKENPKVTDDDDAKMA 791
YLR+ A K T L N D MA
Sbjct: 785 YLRTIGATHTEKSTSRAGAL--NAVAVDGGAGSMA 817
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.134 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,712,081,057
Number of Sequences: 23463169
Number of extensions: 545185065
Number of successful extensions: 1277696
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6111
Number of HSP's successfully gapped in prelim test: 546
Number of HSP's that attempted gapping in prelim test: 1235074
Number of HSP's gapped (non-prelim): 11190
length of query: 808
length of database: 8,064,228,071
effective HSP length: 151
effective length of query: 657
effective length of database: 8,816,256,848
effective search space: 5792280749136
effective search space used: 5792280749136
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 81 (35.8 bits)