Query 003605
Match_columns 808
No_of_seqs 512 out of 3301
Neff 6.5
Searched_HMMs 46136
Date Fri Mar 29 02:35:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003605.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003605hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1187 Serine/threonine prote 100.0 4E-58 8.7E-63 509.6 25.8 290 395-688 61-353 (361)
2 KOG0192 Tyrosine kinase specif 100.0 5.1E-46 1.1E-50 411.5 23.3 258 414-693 46-309 (362)
3 KOG1026 Nerve growth factor re 100.0 1.9E-45 4.1E-50 425.6 17.0 263 409-691 486-766 (774)
4 KOG0197 Tyrosine kinases [Sign 100.0 8E-45 1.7E-49 403.4 17.7 254 413-690 210-464 (468)
5 KOG0581 Mitogen-activated prot 100.0 2E-44 4.3E-49 385.2 16.8 256 398-683 75-335 (364)
6 PLN00113 leucine-rich repeat r 100.0 6.3E-43 1.4E-47 433.8 31.0 268 399-689 683-953 (968)
7 KOG0575 Polo-like serine/threo 100.0 1.7E-42 3.7E-47 388.5 17.9 248 409-683 18-269 (592)
8 KOG0196 Tyrosine kinase, EPH ( 100.0 4.1E-43 8.9E-48 398.7 12.1 266 410-699 630-903 (996)
9 KOG0595 Serine/threonine-prote 100.0 2.6E-42 5.6E-47 371.7 15.9 201 408-618 9-218 (429)
10 cd05102 PTKc_VEGFR3 Catalytic 100.0 1.2E-41 2.6E-46 372.4 19.9 265 407-690 5-337 (338)
11 KOG0591 NIMA (never in mitosis 100.0 2.7E-43 5.9E-48 362.9 5.7 256 410-685 20-283 (375)
12 KOG1095 Protein tyrosine kinas 100.0 1.8E-40 4E-45 396.1 21.6 265 408-692 691-966 (1025)
13 KOG0615 Serine/threonine prote 100.0 6.7E-41 1.4E-45 360.2 14.3 252 407-683 170-437 (475)
14 PHA02988 hypothetical protein; 100.0 9.3E-40 2E-44 350.2 21.7 260 395-688 11-280 (283)
15 KOG1094 Discoidin domain recep 100.0 6.1E-40 1.3E-44 363.1 20.3 265 408-687 537-804 (807)
16 KOG0193 Serine/threonine prote 100.0 2.3E-40 5.1E-45 369.6 16.5 271 399-691 382-657 (678)
17 cd05096 PTKc_DDR1 Catalytic do 100.0 1.5E-39 3.3E-44 350.3 21.4 264 409-685 5-303 (304)
18 KOG0598 Ribosomal protein S6 k 100.0 3.9E-40 8.4E-45 352.2 15.9 243 408-676 24-270 (357)
19 KOG0194 Protein tyrosine kinas 100.0 2.9E-40 6.4E-45 371.8 13.8 268 401-692 149-425 (474)
20 cd05104 PTKc_Kit Catalytic dom 100.0 1.1E-39 2.4E-44 364.1 18.3 261 408-687 34-374 (375)
21 cd05106 PTKc_CSF-1R Catalytic 100.0 1.8E-39 4E-44 362.3 18.3 262 408-688 37-373 (374)
22 PF07714 Pkinase_Tyr: Protein 100.0 2.7E-39 5.8E-44 341.5 17.1 251 412-684 2-259 (259)
23 cd05048 PTKc_Ror Catalytic Dom 100.0 4.1E-39 8.8E-44 342.0 18.5 258 409-686 5-282 (283)
24 KOG4721 Serine/threonine prote 100.0 4.1E-40 9E-45 362.8 11.0 239 413-685 128-366 (904)
25 cd05108 PTKc_EGFR Catalytic do 100.0 9.4E-39 2E-43 346.7 20.3 259 409-691 7-272 (316)
26 cd05064 PTKc_EphR_A10 Catalyti 100.0 1.1E-38 2.4E-43 337.1 19.9 255 409-687 5-265 (266)
27 cd05631 STKc_GRK4 Catalytic do 100.0 1.8E-38 3.9E-43 339.5 21.7 252 410-683 1-261 (285)
28 KOG0198 MEKK and related serin 100.0 2.5E-39 5.4E-44 349.6 14.4 257 409-686 17-279 (313)
29 cd05053 PTKc_FGFR Catalytic do 100.0 1.6E-38 3.6E-43 339.4 20.3 263 406-688 9-292 (293)
30 cd05049 PTKc_Trk Catalytic dom 100.0 9.4E-39 2E-43 338.2 17.9 257 409-685 5-279 (280)
31 cd05094 PTKc_TrkC Catalytic do 100.0 2E-38 4.3E-43 339.5 20.3 262 409-690 5-285 (291)
32 cd05093 PTKc_TrkB Catalytic do 100.0 2E-38 4.4E-43 338.9 20.0 262 409-690 5-282 (288)
33 cd05033 PTKc_EphR Catalytic do 100.0 2.7E-38 5.9E-43 333.1 20.6 256 409-687 4-265 (266)
34 cd05068 PTKc_Frk_like Catalyti 100.0 1.9E-38 4.1E-43 333.3 19.2 256 407-686 4-260 (261)
35 cd05062 PTKc_IGF-1R Catalytic 100.0 1.1E-38 2.5E-43 338.3 17.5 259 407-685 4-276 (277)
36 cd06649 PKc_MEK2 Catalytic dom 100.0 2.2E-38 4.8E-43 346.8 20.2 265 408-685 4-303 (331)
37 cd05045 PTKc_RET Catalytic dom 100.0 2.5E-38 5.4E-43 338.2 20.1 260 410-689 1-288 (290)
38 cd05148 PTKc_Srm_Brk Catalytic 100.0 8.1E-39 1.7E-43 335.3 15.8 257 406-686 3-260 (261)
39 cd05072 PTKc_Lyn Catalytic dom 100.0 2.5E-38 5.4E-43 332.0 19.5 255 408-686 5-260 (261)
40 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 2.5E-38 5.4E-43 346.1 20.0 252 409-683 1-257 (333)
41 KOG0578 p21-activated serine/t 100.0 6E-39 1.3E-43 357.5 14.9 249 410-683 274-523 (550)
42 cd05105 PTKc_PDGFR_alpha Catal 100.0 1.9E-38 4.1E-43 357.7 19.3 264 407-689 35-399 (400)
43 cd05114 PTKc_Tec_Rlk Catalytic 100.0 3.3E-38 7.1E-43 330.6 19.7 251 409-684 4-255 (256)
44 cd07848 STKc_CDKL5 Catalytic d 100.0 2.9E-38 6.2E-43 336.5 18.9 266 409-682 1-283 (287)
45 cd05090 PTKc_Ror1 Catalytic do 100.0 4.3E-38 9.4E-43 334.9 20.3 257 409-685 5-281 (283)
46 cd05054 PTKc_VEGFR Catalytic d 100.0 1.8E-38 3.8E-43 349.3 17.7 264 408-690 6-336 (337)
47 KOG0593 Predicted protein kina 100.0 6.2E-39 1.3E-43 333.6 13.2 265 409-683 2-284 (396)
48 cd05043 PTK_Ryk Pseudokinase d 100.0 4.1E-38 9E-43 334.1 19.9 264 407-690 4-279 (280)
49 cd05052 PTKc_Abl Catalytic dom 100.0 6.4E-38 1.4E-42 330.0 20.8 255 409-687 6-262 (263)
50 PTZ00263 protein kinase A cata 100.0 6.3E-38 1.4E-42 343.2 20.9 245 409-683 18-271 (329)
51 KOG0600 Cdc2-related protein k 100.0 1.3E-38 2.8E-43 349.8 15.3 262 408-682 116-399 (560)
52 cd08228 STKc_Nek6 Catalytic do 100.0 7.8E-38 1.7E-42 328.9 20.8 260 409-687 2-265 (267)
53 PTZ00267 NIMA-related protein 100.0 4.1E-38 8.9E-43 362.6 20.3 254 410-683 68-323 (478)
54 cd05111 PTK_HER3 Pseudokinase 100.0 6.4E-38 1.4E-42 333.9 20.2 258 409-690 7-271 (279)
55 cd05035 PTKc_Axl_like Catalyti 100.0 7.8E-38 1.7E-42 329.1 20.7 257 411-687 1-272 (273)
56 cd05571 STKc_PKB Catalytic dom 100.0 3.1E-38 6.8E-43 344.4 18.0 242 415-683 1-251 (323)
57 KOG1989 ARK protein kinase fam 100.0 1.2E-37 2.7E-42 362.2 24.0 262 407-691 35-315 (738)
58 cd05084 PTKc_Fes Catalytic dom 100.0 5.1E-38 1.1E-42 327.9 18.6 248 415-685 1-251 (252)
59 KOG3653 Transforming growth fa 100.0 3.4E-38 7.4E-43 344.1 17.8 267 411-690 212-506 (534)
60 KOG0582 Ste20-like serine/thre 100.0 6E-38 1.3E-42 340.2 18.7 263 408-683 25-293 (516)
61 KOG4278 Protein tyrosine kinas 100.0 3.2E-38 6.9E-43 349.7 16.8 265 402-690 260-526 (1157)
62 cd05612 STKc_PRKX_like Catalyt 100.0 5.3E-38 1.1E-42 337.2 18.0 245 409-683 1-254 (291)
63 cd05036 PTKc_ALK_LTK Catalytic 100.0 8.9E-38 1.9E-42 331.8 19.3 259 407-685 4-276 (277)
64 KOG0583 Serine/threonine prote 100.0 1.2E-37 2.6E-42 346.8 21.2 249 406-681 14-273 (370)
65 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 2.7E-37 5.9E-42 323.9 22.4 259 409-687 2-265 (267)
66 cd05091 PTKc_Ror2 Catalytic do 100.0 6.6E-38 1.4E-42 333.1 17.7 256 410-685 6-281 (283)
67 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 2.1E-37 4.5E-42 329.6 21.5 267 412-688 7-282 (283)
68 cd05098 PTKc_FGFR1 Catalytic d 100.0 1.2E-37 2.7E-42 336.2 20.0 264 408-691 17-303 (307)
69 PLN00034 mitogen-activated pro 100.0 1E-37 2.3E-42 344.5 19.8 246 411-683 76-328 (353)
70 KOG0592 3-phosphoinositide-dep 100.0 1.8E-38 3.9E-43 351.1 13.6 253 407-684 71-339 (604)
71 cd05573 STKc_ROCK_NDR_like Cat 100.0 7.5E-38 1.6E-42 343.4 18.4 253 409-683 1-285 (350)
72 cd05032 PTKc_InsR_like Catalyt 100.0 1.2E-37 2.5E-42 329.4 19.2 258 408-685 5-276 (277)
73 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1.6E-37 3.4E-42 330.4 20.0 269 409-687 4-283 (284)
74 cd05101 PTKc_FGFR2 Catalytic d 100.0 1.6E-37 3.4E-42 334.6 20.1 264 407-690 13-299 (304)
75 cd05113 PTKc_Btk_Bmx Catalytic 100.0 1.2E-37 2.5E-42 327.5 18.6 252 409-685 4-256 (256)
76 cd08229 STKc_Nek7 Catalytic do 100.0 1.5E-37 3.3E-42 326.7 19.4 260 409-687 2-265 (267)
77 cd05089 PTKc_Tie1 Catalytic do 100.0 1.9E-37 4.2E-42 333.2 20.5 261 409-692 2-280 (297)
78 cd05585 STKc_YPK1_like Catalyt 100.0 1.3E-37 2.7E-42 337.8 19.1 237 417-680 1-241 (312)
79 cd05075 PTKc_Axl Catalytic dom 100.0 2E-37 4.3E-42 326.7 20.0 257 411-687 1-271 (272)
80 cd05063 PTKc_EphR_A2 Catalytic 100.0 2E-37 4.3E-42 326.4 19.9 257 408-687 4-267 (268)
81 cd05595 STKc_PKB_beta Catalyti 100.0 8.9E-38 1.9E-42 341.1 17.9 242 415-683 1-251 (323)
82 cd05109 PTKc_HER2 Catalytic do 100.0 2.1E-37 4.7E-42 328.8 20.3 260 408-691 6-272 (279)
83 KOG0661 MAPK related serine/th 100.0 5.1E-39 1.1E-43 350.8 7.8 267 407-683 8-291 (538)
84 cd07859 STKc_TDY_MAPK_plant Ca 100.0 1.6E-37 3.6E-42 338.4 19.6 262 410-683 1-290 (338)
85 KOG0659 Cdk activating kinase 100.0 6.3E-38 1.4E-42 321.7 15.2 264 409-683 2-281 (318)
86 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.5E-37 3.3E-42 332.8 18.9 265 409-682 5-284 (288)
87 cd05051 PTKc_DDR Catalytic dom 100.0 2.3E-37 4.9E-42 330.7 19.8 265 408-685 4-295 (296)
88 cd05097 PTKc_DDR_like Catalyti 100.0 1.3E-37 2.8E-42 333.9 18.0 264 409-685 5-294 (295)
89 KOG0597 Serine-threonine prote 100.0 2.8E-38 6E-43 349.0 12.9 247 409-683 2-251 (808)
90 cd05593 STKc_PKB_gamma Catalyt 100.0 3.2E-37 6.9E-42 337.7 21.2 242 415-683 1-251 (328)
91 PTZ00283 serine/threonine prot 100.0 1.2E-37 2.7E-42 360.3 18.8 261 403-683 26-297 (496)
92 cd05055 PTKc_PDGFR Catalytic d 100.0 2E-37 4.2E-42 334.8 19.1 259 408-687 34-301 (302)
93 cd06650 PKc_MEK1 Catalytic dom 100.0 2E-37 4.4E-42 339.9 19.6 266 408-683 4-299 (333)
94 cd05059 PTKc_Tec_like Catalyti 100.0 1.9E-37 4.2E-42 325.1 18.5 250 410-684 5-255 (256)
95 cd05061 PTKc_InsR Catalytic do 100.0 1.6E-37 3.6E-42 332.0 18.3 262 406-687 3-278 (288)
96 cd05088 PTKc_Tie2 Catalytic do 100.0 4E-37 8.6E-42 332.3 21.1 261 409-692 7-285 (303)
97 cd05599 STKc_NDR_like Catalyti 100.0 2.3E-37 5E-42 342.3 19.3 253 409-683 1-296 (364)
98 cd05092 PTKc_TrkA Catalytic do 100.0 2.2E-37 4.7E-42 329.7 18.4 257 409-685 5-279 (280)
99 cd05100 PTKc_FGFR3 Catalytic d 100.0 4E-37 8.7E-42 336.7 21.0 264 408-691 11-297 (334)
100 cd07862 STKc_CDK6 Catalytic do 100.0 3E-37 6.5E-42 329.2 19.3 265 409-682 1-286 (290)
101 cd05095 PTKc_DDR2 Catalytic do 100.0 3.7E-37 8E-42 330.5 20.0 265 408-685 4-295 (296)
102 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.5E-37 3.2E-42 350.5 17.5 263 407-688 35-400 (401)
103 cd05626 STKc_LATS2 Catalytic d 100.0 5.2E-37 1.1E-41 342.8 21.8 252 410-683 2-305 (381)
104 cd05099 PTKc_FGFR4 Catalytic d 100.0 5.8E-37 1.2E-41 332.4 21.3 264 408-691 11-297 (314)
105 cd05103 PTKc_VEGFR2 Catalytic 100.0 2.3E-37 5E-42 340.6 18.5 264 408-690 6-342 (343)
106 cd05594 STKc_PKB_alpha Catalyt 100.0 2.2E-37 4.7E-42 337.9 18.1 242 415-683 1-252 (325)
107 cd05065 PTKc_EphR_B Catalytic 100.0 5.4E-37 1.2E-41 323.7 20.5 255 410-687 5-268 (269)
108 cd05608 STKc_GRK1 Catalytic do 100.0 2.7E-37 5.9E-42 329.6 18.4 248 417-683 1-257 (280)
109 cd05614 STKc_MSK2_N N-terminal 100.0 5.9E-37 1.3E-41 334.9 21.3 252 410-683 1-267 (332)
110 cd05588 STKc_aPKC Catalytic do 100.0 5.7E-37 1.2E-41 335.6 21.1 248 415-682 1-261 (329)
111 PTZ00426 cAMP-dependent protei 100.0 3.5E-37 7.5E-42 339.8 19.5 246 408-683 29-284 (340)
112 cd05584 STKc_p70S6K Catalytic 100.0 3.3E-37 7.2E-42 336.4 19.1 242 415-683 2-256 (323)
113 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 4.9E-37 1.1E-41 322.4 19.7 254 408-686 5-259 (260)
114 cd05085 PTKc_Fer Catalytic dom 100.0 5.7E-37 1.2E-41 319.2 19.9 247 415-685 1-249 (250)
115 cd08529 STKc_FA2-like Catalyti 100.0 6.5E-37 1.4E-41 319.1 20.3 250 410-683 1-253 (256)
116 cd05601 STKc_CRIK Catalytic do 100.0 2.1E-37 4.5E-42 338.2 17.3 253 409-683 1-263 (330)
117 cd05050 PTKc_Musk Catalytic do 100.0 3.3E-37 7.1E-42 329.0 18.5 258 408-685 4-287 (288)
118 cd05629 STKc_NDR_like_fungal C 100.0 3.6E-37 7.8E-42 343.2 19.6 253 409-683 1-305 (377)
119 cd00192 PTKc Catalytic domain 100.0 5.8E-37 1.3E-41 318.6 19.7 251 415-685 1-262 (262)
120 cd05071 PTKc_Src Catalytic dom 100.0 6.1E-37 1.3E-41 323.1 19.9 255 408-687 5-260 (262)
121 cd05039 PTKc_Csk_like Catalyti 100.0 5.4E-37 1.2E-41 320.9 19.2 250 408-686 5-255 (256)
122 cd05589 STKc_PKN Catalytic dom 100.0 5.1E-37 1.1E-41 334.8 19.7 240 411-678 1-247 (324)
123 cd07869 STKc_PFTAIRE1 Catalyti 100.0 5.2E-37 1.1E-41 330.8 19.5 264 408-682 4-287 (303)
124 cd05605 STKc_GRK4_like Catalyt 100.0 7.8E-37 1.7E-41 326.9 20.7 252 410-683 1-261 (285)
125 cd05047 PTKc_Tie Catalytic dom 100.0 7.5E-37 1.6E-41 323.5 20.1 251 415-688 1-269 (270)
126 cd05116 PTKc_Syk Catalytic dom 100.0 5.9E-37 1.3E-41 321.6 19.1 246 416-686 2-254 (257)
127 cd05618 STKc_aPKC_iota Catalyt 100.0 8.2E-37 1.8E-41 334.6 20.8 243 415-677 1-250 (329)
128 KOG0694 Serine/threonine prote 100.0 3.6E-37 7.8E-42 349.0 18.3 241 407-677 366-613 (694)
129 cd05067 PTKc_Lck_Blk Catalytic 100.0 6.9E-37 1.5E-41 321.3 19.2 254 408-686 5-259 (260)
130 KOG0201 Serine/threonine prote 100.0 3.4E-37 7.4E-42 334.4 17.2 249 409-683 13-263 (467)
131 cd05628 STKc_NDR1 Catalytic do 100.0 6.6E-37 1.4E-41 339.5 20.1 202 409-617 1-239 (363)
132 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 5.5E-37 1.2E-41 324.5 18.4 269 409-687 4-283 (284)
133 cd06638 STKc_myosinIIIA Cataly 100.0 6.1E-37 1.3E-41 325.8 18.4 267 397-684 6-284 (286)
134 cd05115 PTKc_Zap-70 Catalytic 100.0 1.2E-36 2.6E-41 320.3 20.4 248 416-687 2-255 (257)
135 cd06625 STKc_MEKK3_like Cataly 100.0 9.4E-37 2E-41 319.6 19.5 252 409-683 2-260 (263)
136 cd05057 PTKc_EGFR_like Catalyt 100.0 1.5E-36 3.3E-41 322.3 21.2 259 409-691 7-272 (279)
137 cd06624 STKc_ASK Catalytic dom 100.0 1.2E-36 2.6E-41 320.9 20.0 258 403-683 2-265 (268)
138 cd05034 PTKc_Src_like Catalyti 100.0 9.7E-37 2.1E-41 319.5 19.1 256 407-686 4-260 (261)
139 cd05616 STKc_cPKC_beta Catalyt 100.0 1.1E-36 2.3E-41 332.2 19.9 241 410-677 1-246 (323)
140 cd05596 STKc_ROCK Catalytic do 100.0 6.3E-37 1.4E-41 341.3 18.6 254 407-683 41-304 (370)
141 KOG2052 Activin A type IB rece 100.0 6E-37 1.3E-41 332.3 17.6 277 394-690 196-506 (513)
142 cd05041 PTKc_Fes_like Catalyti 100.0 1.3E-36 2.9E-41 316.7 19.7 248 415-685 1-250 (251)
143 cd05069 PTKc_Yes Catalytic dom 100.0 1.7E-36 3.6E-41 318.8 20.5 253 409-686 6-259 (260)
144 cd05066 PTKc_EphR_A Catalytic 100.0 1.3E-36 2.9E-41 320.8 19.8 256 409-687 4-266 (267)
145 cd05603 STKc_SGK2 Catalytic do 100.0 1.1E-36 2.3E-41 331.6 19.7 237 415-678 1-242 (321)
146 cd06646 STKc_MAP4K5 Catalytic 100.0 1.1E-36 2.4E-41 320.6 19.0 255 408-684 8-266 (267)
147 cd05591 STKc_nPKC_epsilon Cata 100.0 1.3E-36 2.8E-41 331.2 20.2 242 415-683 1-254 (321)
148 cd05625 STKc_LATS1 Catalytic d 100.0 1.2E-36 2.5E-41 339.6 20.2 250 410-682 2-304 (382)
149 cd05082 PTKc_Csk Catalytic dom 100.0 1.4E-36 2.9E-41 318.3 19.4 248 409-686 6-255 (256)
150 cd05598 STKc_LATS Catalytic do 100.0 6.7E-37 1.5E-41 340.6 17.9 252 409-683 1-301 (376)
151 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 1.4E-36 3E-41 320.9 19.4 255 415-685 1-268 (269)
152 cd06637 STKc_TNIK Catalytic do 100.0 8.4E-37 1.8E-41 322.0 17.6 254 405-682 2-268 (272)
153 cd05587 STKc_cPKC Catalytic do 100.0 1.2E-36 2.5E-41 332.0 19.1 241 410-677 1-246 (324)
154 KOG0585 Ca2+/calmodulin-depend 100.0 8E-37 1.7E-41 333.1 17.6 257 406-685 94-374 (576)
155 cd05592 STKc_nPKC_theta_delta 100.0 1.9E-36 4.1E-41 329.7 20.6 240 415-681 1-246 (316)
156 cd05040 PTKc_Ack_like Catalyti 100.0 1.1E-36 2.3E-41 318.5 17.9 249 415-685 1-256 (257)
157 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.5E-36 3.2E-41 323.6 19.3 261 410-687 5-283 (284)
158 cd05621 STKc_ROCK2 Catalytic d 100.0 1.4E-36 3.1E-41 338.7 19.8 255 404-683 38-304 (370)
159 cd05044 PTKc_c-ros Catalytic d 100.0 8.4E-37 1.8E-41 321.4 16.8 251 415-685 1-268 (269)
160 cd05590 STKc_nPKC_eta Catalyti 100.0 1.6E-36 3.5E-41 330.8 19.6 238 415-679 1-243 (320)
161 cd05112 PTKc_Itk Catalytic dom 100.0 2.2E-36 4.7E-41 316.0 19.7 251 409-684 4-255 (256)
162 cd06619 PKc_MKK5 Catalytic dom 100.0 2.6E-36 5.5E-41 321.3 20.5 250 409-683 1-253 (279)
163 cd05607 STKc_GRK7 Catalytic do 100.0 1.3E-36 2.9E-41 323.8 18.2 247 417-684 1-251 (277)
164 KOG2345 Serine/threonine prote 100.0 4.3E-37 9.3E-42 312.9 13.7 266 407-688 19-301 (302)
165 cd05056 PTKc_FAK Catalytic dom 100.0 3.1E-36 6.6E-41 318.1 20.6 258 408-690 5-268 (270)
166 cd05582 STKc_RSK_N N-terminal 100.0 5.7E-37 1.2E-41 333.3 15.4 238 415-679 2-245 (318)
167 cd05060 PTKc_Syk_like Catalyti 100.0 2.6E-36 5.6E-41 316.4 19.6 248 415-687 1-255 (257)
168 cd05617 STKc_aPKC_zeta Catalyt 100.0 2.8E-36 6.2E-41 329.8 20.7 244 415-678 1-249 (327)
169 KOG0605 NDR and related serine 100.0 7.3E-37 1.6E-41 338.7 16.0 247 407-676 139-435 (550)
170 cd05058 PTKc_Met_Ron Catalytic 100.0 2.2E-36 4.7E-41 317.0 18.9 252 415-689 1-261 (262)
171 cd05073 PTKc_Hck Catalytic dom 100.0 3.3E-36 7.1E-41 316.5 20.2 255 407-686 4-259 (260)
172 cd06615 PKc_MEK Catalytic doma 100.0 3.6E-36 7.8E-41 325.6 21.0 263 409-685 1-289 (308)
173 cd06654 STKc_PAK1 Catalytic do 100.0 3.3E-36 7.2E-41 324.0 20.5 250 409-683 20-270 (296)
174 cd05575 STKc_SGK Catalytic dom 100.0 1.2E-36 2.6E-41 331.8 17.1 238 415-679 1-243 (323)
175 cd05623 STKc_MRCK_alpha Cataly 100.0 1.1E-35 2.4E-40 325.6 24.6 255 409-683 1-266 (332)
176 cd06612 STKc_MST1_2 Catalytic 100.0 2.6E-36 5.7E-41 314.5 18.7 249 409-682 3-252 (256)
177 cd05110 PTKc_HER4 Catalytic do 100.0 2.5E-36 5.4E-41 325.8 18.9 259 409-691 7-272 (303)
178 KOG0588 Serine/threonine prote 100.0 4.6E-37 1E-41 345.6 13.4 248 409-684 12-264 (786)
179 PHA03212 serine/threonine kina 100.0 2.4E-36 5.2E-41 339.6 19.3 261 408-683 91-376 (391)
180 cd05570 STKc_PKC Catalytic dom 100.0 2E-36 4.2E-41 329.6 17.7 241 415-682 1-251 (318)
181 PF00069 Pkinase: Protein kina 100.0 2.2E-36 4.8E-41 315.3 17.4 252 411-682 1-256 (260)
182 cd05597 STKc_DMPK_like Catalyt 100.0 1.1E-35 2.4E-40 325.7 23.7 255 409-683 1-266 (331)
183 KOG0589 Serine/threonine prote 100.0 4.4E-37 9.5E-42 340.6 12.7 251 409-683 4-258 (426)
184 cd05042 PTKc_Aatyk Catalytic d 100.0 3.1E-36 6.6E-41 318.0 18.5 253 416-684 2-267 (269)
185 cd05620 STKc_nPKC_delta Cataly 100.0 3.5E-36 7.7E-41 327.5 19.4 240 415-681 1-246 (316)
186 cd06639 STKc_myosinIIIB Cataly 100.0 4.1E-36 8.8E-41 321.0 19.4 265 398-683 11-287 (291)
187 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 2.9E-36 6.4E-41 314.7 17.8 238 415-685 1-259 (259)
188 cd06643 STKc_SLK Catalytic dom 100.0 4.2E-36 9E-41 319.5 19.3 250 411-683 7-262 (282)
189 KOG1025 Epidermal growth facto 100.0 2.1E-36 4.5E-41 344.7 17.9 255 414-692 701-962 (1177)
190 cd08528 STKc_Nek10 Catalytic d 100.0 2.7E-36 5.8E-41 318.0 17.5 254 410-685 1-268 (269)
191 cd05615 STKc_cPKC_alpha Cataly 100.0 3.8E-36 8.3E-41 328.3 19.3 242 410-678 1-247 (323)
192 cd05632 STKc_GRK5 Catalytic do 100.0 6.7E-36 1.5E-40 319.7 20.5 252 410-683 1-261 (285)
193 cd05619 STKc_nPKC_theta Cataly 100.0 3.7E-36 7.9E-41 327.6 18.8 241 415-682 1-247 (316)
194 cd08219 STKc_Nek3 Catalytic do 100.0 5.9E-36 1.3E-40 312.9 19.6 250 410-683 1-252 (255)
195 cd05624 STKc_MRCK_beta Catalyt 100.0 1.4E-35 3E-40 325.0 23.2 255 409-683 1-266 (331)
196 cd05086 PTKc_Aatyk2 Catalytic 100.0 7.7E-36 1.7E-40 315.8 20.5 254 416-685 2-267 (268)
197 PTZ00284 protein kinase; Provi 100.0 2.1E-36 4.5E-41 347.2 17.3 269 401-683 121-438 (467)
198 cd05604 STKc_SGK3 Catalytic do 100.0 1.7E-36 3.6E-41 330.9 15.7 242 415-683 1-247 (325)
199 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 3E-36 6.6E-41 320.8 17.2 238 416-684 2-273 (274)
200 cd05627 STKc_NDR2 Catalytic do 100.0 3E-36 6.6E-41 333.7 17.8 202 409-617 1-239 (360)
201 cd05074 PTKc_Tyro3 Catalytic d 100.0 6.4E-36 1.4E-40 315.4 19.5 257 411-687 1-272 (273)
202 cd06631 STKc_YSK4 Catalytic do 100.0 6.1E-36 1.3E-40 314.6 19.2 251 410-682 1-261 (265)
203 cd06613 STKc_MAP4K3_like Catal 100.0 7.8E-36 1.7E-40 312.0 19.9 254 408-682 2-259 (262)
204 cd07872 STKc_PCTAIRE2 Catalyti 100.0 4.4E-36 9.5E-41 324.5 18.5 266 409-683 6-286 (309)
205 PHA03211 serine/threonine kina 100.0 5.5E-36 1.2E-40 343.1 20.2 263 408-683 168-455 (461)
206 cd08217 STKc_Nek2 Catalytic do 100.0 5.5E-36 1.2E-40 312.3 18.5 255 410-683 1-262 (265)
207 PTZ00036 glycogen synthase kin 100.0 2.7E-36 5.8E-41 344.2 17.6 264 407-683 64-351 (440)
208 cd07876 STKc_JNK2 Catalytic do 100.0 6E-36 1.3E-40 330.9 19.9 264 407-683 19-315 (359)
209 cd07853 STKc_NLK Catalytic dom 100.0 3.1E-36 6.8E-41 335.0 17.6 265 410-683 1-288 (372)
210 cd06617 PKc_MKK3_6 Catalytic d 100.0 8.6E-36 1.9E-40 316.1 20.1 253 409-683 1-261 (283)
211 cd05630 STKc_GRK6 Catalytic do 100.0 1E-35 2.2E-40 318.6 20.8 252 410-683 1-261 (285)
212 cd05622 STKc_ROCK1 Catalytic d 100.0 6.4E-36 1.4E-40 333.5 19.9 261 401-684 35-305 (371)
213 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 5.4E-36 1.2E-40 316.5 18.4 239 415-684 1-261 (262)
214 cd06628 STKc_MAPKKK_Byr2_like 100.0 8.6E-36 1.9E-40 313.4 19.8 249 410-682 1-263 (267)
215 cd05046 PTK_CCK4 Pseudokinase 100.0 7.4E-36 1.6E-40 315.6 19.3 257 409-685 5-274 (275)
216 cd07874 STKc_JNK3 Catalytic do 100.0 4.3E-36 9.3E-41 331.4 18.1 264 407-683 15-311 (355)
217 PHA03209 serine/threonine kina 100.0 4.6E-36 9.9E-41 332.5 18.3 192 407-614 64-256 (357)
218 cd05602 STKc_SGK1 Catalytic do 100.0 3.5E-36 7.6E-41 328.3 16.9 241 415-682 1-246 (325)
219 cd06644 STKc_STK10_LOK Catalyt 100.0 8.8E-36 1.9E-40 318.9 19.5 252 409-683 12-269 (292)
220 cd08223 STKc_Nek4 Catalytic do 100.0 1.2E-35 2.7E-40 310.1 19.9 250 410-683 1-254 (257)
221 cd06632 STKc_MEKK1_plant Catal 100.0 1E-35 2.2E-40 310.0 19.1 247 410-682 1-254 (258)
222 cd06656 STKc_PAK3 Catalytic do 100.0 1.2E-35 2.7E-40 319.7 20.4 251 408-683 18-269 (297)
223 cd07863 STKc_CDK4 Catalytic do 100.0 1.2E-35 2.6E-40 316.1 20.0 264 410-682 1-284 (288)
224 cd06609 STKc_MST3_like Catalyt 100.0 9.4E-36 2E-40 315.1 19.0 249 409-683 1-251 (274)
225 cd08221 STKc_Nek9 Catalytic do 100.0 1.6E-35 3.5E-40 309.5 20.3 251 410-684 1-254 (256)
226 cd06655 STKc_PAK2 Catalytic do 100.0 1E-35 2.3E-40 320.5 19.4 250 409-683 19-269 (296)
227 cd07847 STKc_CDKL1_4 Catalytic 100.0 1.8E-35 4E-40 313.6 21.0 263 409-682 1-282 (286)
228 PHA03207 serine/threonine kina 100.0 9.8E-36 2.1E-40 334.1 19.9 263 408-683 91-375 (392)
229 KOG4257 Focal adhesion tyrosin 100.0 2.2E-36 4.8E-41 336.1 14.4 260 407-691 387-653 (974)
230 cd07861 STKc_CDK1_euk Catalyti 100.0 1.2E-35 2.7E-40 315.2 19.6 264 410-682 1-281 (285)
231 cd06642 STKc_STK25-YSK1 Cataly 100.0 5.7E-36 1.2E-40 317.6 16.9 247 410-683 5-253 (277)
232 KOG0616 cAMP-dependent protein 100.0 2.4E-36 5.2E-41 313.9 13.6 236 409-674 44-283 (355)
233 cd06645 STKc_MAP4K3 Catalytic 100.0 8.2E-36 1.8E-40 314.0 17.7 252 409-682 9-264 (267)
234 cd06611 STKc_SLK_like Catalyti 100.0 6.7E-36 1.4E-40 317.2 17.1 253 408-683 4-262 (280)
235 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 2.2E-36 4.7E-41 317.9 13.0 240 415-685 1-258 (258)
236 cd05083 PTKc_Chk Catalytic dom 100.0 9.8E-36 2.1E-40 311.5 17.7 246 409-685 6-252 (254)
237 cd06651 STKc_MEKK3 Catalytic d 100.0 2E-35 4.4E-40 311.5 20.3 250 409-682 2-260 (266)
238 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 9.7E-36 2.1E-40 317.3 17.9 256 409-685 5-268 (284)
239 smart00219 TyrKc Tyrosine kina 100.0 1.6E-35 3.4E-40 308.2 18.9 251 411-684 1-258 (258)
240 cd06608 STKc_myosinIII_like Ca 100.0 1.1E-35 2.5E-40 312.1 17.9 256 406-682 3-271 (275)
241 cd06636 STKc_MAP4K4_6 Catalyti 100.0 1.6E-35 3.5E-40 314.6 18.8 260 399-682 6-278 (282)
242 cd07833 STKc_CDKL Catalytic do 100.0 1.3E-35 2.8E-40 315.1 17.9 266 409-682 1-284 (288)
243 PRK13184 pknD serine/threonine 100.0 1.8E-35 3.9E-40 355.5 21.3 264 409-690 2-293 (932)
244 cd06629 STKc_MAPKKK_Bck1_like 100.0 2.3E-35 4.9E-40 311.5 19.5 255 410-683 2-269 (272)
245 cd08218 STKc_Nek1 Catalytic do 100.0 3.1E-35 6.7E-40 307.3 20.1 250 410-683 1-253 (256)
246 cd06610 STKc_OSR1_SPAK Catalyt 100.0 4.7E-35 1E-39 306.6 21.5 257 409-682 1-263 (267)
247 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 6.1E-35 1.3E-39 312.0 22.7 260 409-683 1-266 (287)
248 cd06652 STKc_MEKK2 Catalytic d 100.0 3.8E-35 8.3E-40 308.9 20.8 251 409-683 2-261 (265)
249 cd07846 STKc_CDKL2_3 Catalytic 100.0 7.7E-36 1.7E-40 316.9 15.5 265 409-682 1-282 (286)
250 cd07873 STKc_PCTAIRE1 Catalyti 100.0 2.4E-35 5.3E-40 317.2 19.4 263 409-683 6-286 (301)
251 cd07875 STKc_JNK1 Catalytic do 100.0 1.9E-35 4.2E-40 327.5 18.9 262 407-683 22-318 (364)
252 KOG0611 Predicted serine/threo 100.0 2E-36 4.3E-41 323.3 10.3 248 408-684 52-304 (668)
253 cd08227 PK_STRAD_alpha Pseudok 100.0 3.3E-35 7.2E-40 320.7 20.1 264 413-683 2-307 (327)
254 cd06640 STKc_MST4 Catalytic do 100.0 4.1E-35 8.8E-40 311.4 20.2 247 410-683 5-253 (277)
255 cd07868 STKc_CDK8 Catalytic do 100.0 4.9E-35 1.1E-39 316.8 20.8 199 414-618 6-220 (317)
256 KOG0199 ACK and related non-re 100.0 3.3E-36 7.1E-41 338.4 11.9 250 413-685 114-370 (1039)
257 cd06623 PKc_MAPKK_plant_like C 100.0 7.3E-35 1.6E-39 304.6 21.2 252 409-683 1-256 (264)
258 cd08220 STKc_Nek8 Catalytic do 100.0 5.1E-35 1.1E-39 304.8 19.9 249 410-683 1-253 (256)
259 KOG0658 Glycogen synthase kina 100.0 5.1E-36 1.1E-40 320.1 12.4 261 410-683 25-306 (364)
260 cd07839 STKc_CDK5 Catalytic do 100.0 3.1E-35 6.7E-40 312.4 18.1 262 410-682 1-280 (284)
261 cd06626 STKc_MEKK4 Catalytic d 100.0 7E-35 1.5E-39 305.2 20.4 252 410-682 1-260 (264)
262 cd06606 STKc_MAPKKK Catalytic 100.0 9E-35 2E-39 300.8 20.9 251 410-682 1-256 (260)
263 cd07841 STKc_CDK7 Catalytic do 100.0 5.7E-35 1.2E-39 312.8 19.7 263 410-683 1-282 (298)
264 cd06630 STKc_MEKK1 Catalytic d 100.0 5.5E-35 1.2E-39 307.1 19.1 253 410-682 1-263 (268)
265 cd07867 STKc_CDC2L6 Catalytic 100.0 4.3E-35 9.3E-40 316.5 18.8 198 414-617 6-219 (317)
266 cd05574 STKc_phototropin_like 100.0 6.2E-35 1.3E-39 315.9 20.0 251 409-680 1-282 (316)
267 cd06605 PKc_MAPKK Catalytic do 100.0 2.7E-35 5.9E-40 308.8 16.7 253 409-683 1-257 (265)
268 cd07878 STKc_p38beta_MAPK11 Ca 100.0 3.4E-35 7.4E-40 322.4 18.0 261 405-683 11-298 (343)
269 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 5.5E-35 1.2E-39 311.1 19.0 253 409-683 1-262 (286)
270 cd05609 STKc_MAST Catalytic do 100.0 5.4E-35 1.2E-39 315.4 18.9 256 409-686 1-273 (305)
271 cd05586 STKc_Sck1_like Catalyt 100.0 1.7E-35 3.6E-40 323.4 15.1 236 417-678 1-244 (330)
272 cd07844 STKc_PCTAIRE_like Cata 100.0 8.8E-35 1.9E-39 310.3 20.3 263 409-682 5-287 (291)
273 KOG0580 Serine/threonine prote 100.0 3.6E-36 7.8E-41 305.0 9.0 250 408-684 21-274 (281)
274 cd07832 STKc_CCRK Catalytic do 100.0 5E-35 1.1E-39 310.3 18.2 263 410-683 1-282 (286)
275 cd05122 PKc_STE Catalytic doma 100.0 1.5E-34 3.2E-39 298.0 20.3 249 410-682 1-250 (253)
276 cd06647 STKc_PAK_I Catalytic d 100.0 1.1E-34 2.4E-39 311.8 20.0 250 409-683 19-269 (293)
277 cd06917 STKc_NAK1_like Catalyt 100.0 1.2E-34 2.6E-39 306.8 20.0 248 410-683 2-255 (277)
278 cd06658 STKc_PAK5 Catalytic do 100.0 3.4E-35 7.4E-40 315.8 16.0 246 413-683 26-272 (292)
279 PTZ00266 NIMA-related protein 100.0 2.4E-34 5.1E-39 347.1 24.9 259 405-683 9-295 (1021)
280 cd07842 STKc_CDK8_like Catalyt 100.0 1.2E-34 2.5E-39 312.3 19.9 269 410-682 1-312 (316)
281 cd05580 STKc_PKA Catalytic dom 100.0 1.2E-34 2.6E-39 310.1 19.8 244 409-682 1-253 (290)
282 cd06641 STKc_MST3 Catalytic do 100.0 1.6E-34 3.5E-39 306.8 20.4 246 411-683 6-253 (277)
283 cd08530 STKc_CNK2-like Catalyt 100.0 7E-35 1.5E-39 303.3 17.2 250 410-683 1-253 (256)
284 cd07870 STKc_PFTAIRE2 Catalyti 100.0 1.2E-34 2.5E-39 309.8 19.2 267 407-682 3-287 (291)
285 KOG0660 Mitogen-activated prot 100.0 1.5E-35 3.3E-40 316.0 12.1 267 407-683 20-310 (359)
286 KOG0663 Protein kinase PITSLRE 100.0 2.5E-35 5.4E-40 310.2 12.8 264 410-682 77-360 (419)
287 cd06659 STKc_PAK6 Catalytic do 100.0 6.5E-35 1.4E-39 314.4 16.3 245 414-683 26-271 (297)
288 cd06614 STKc_PAK Catalytic dom 100.0 1.7E-34 3.7E-39 307.7 19.3 254 406-683 16-270 (286)
289 KOG1024 Receptor-like protein 100.0 5.7E-35 1.2E-39 311.7 15.4 270 400-689 275-557 (563)
290 cd08225 STKc_Nek5 Catalytic do 100.0 1.3E-34 2.8E-39 301.9 17.9 250 410-683 1-254 (257)
291 cd08215 STKc_Nek Catalytic dom 100.0 2.8E-34 6E-39 297.8 20.1 251 410-682 1-254 (258)
292 cd06607 STKc_TAO Catalytic dom 100.0 2E-34 4.3E-39 311.3 19.5 246 409-683 15-267 (307)
293 cd07860 STKc_CDK2_3 Catalytic 100.0 1.1E-34 2.3E-39 308.2 17.0 262 410-682 1-280 (284)
294 cd07843 STKc_CDC2L1 Catalytic 100.0 1.8E-34 4E-39 308.5 18.7 265 409-682 5-289 (293)
295 cd07837 STKc_CdkB_plant Cataly 100.0 1.9E-34 4.2E-39 307.9 18.0 266 409-682 1-290 (295)
296 KOG0594 Protein kinase PCTAIRE 100.0 1.5E-34 3.3E-39 308.9 16.7 267 409-683 11-302 (323)
297 cd05578 STKc_Yank1 Catalytic d 100.0 2E-34 4.2E-39 302.0 17.3 247 410-681 1-253 (258)
298 cd06648 STKc_PAK_II Catalytic 100.0 3.3E-34 7.2E-39 306.6 19.4 247 411-682 21-268 (285)
299 cd06635 STKc_TAO1 Catalytic do 100.0 3.9E-34 8.3E-39 311.0 19.8 247 411-686 27-280 (317)
300 KOG0667 Dual-specificity tyros 100.0 1.9E-34 4E-39 327.0 17.7 262 410-683 187-502 (586)
301 cd07865 STKc_CDK9 Catalytic do 100.0 4.1E-34 9E-39 306.8 19.4 265 408-682 11-306 (310)
302 cd07831 STKc_MOK Catalytic dom 100.0 3.8E-34 8.2E-39 302.9 18.8 258 411-682 1-278 (282)
303 cd07836 STKc_Pho85 Catalytic d 100.0 4.6E-34 1E-38 303.0 19.4 264 410-682 1-280 (284)
304 cd07840 STKc_CDK9_like Catalyt 100.0 2.8E-34 6.1E-39 303.9 17.5 264 411-682 1-283 (287)
305 cd06616 PKc_MKK4 Catalytic dom 100.0 2E-34 4.4E-39 307.1 16.5 255 410-683 5-267 (288)
306 cd07835 STKc_CDK1_like Catalyt 100.0 2.8E-34 6.2E-39 304.8 17.6 261 411-682 1-279 (283)
307 cd05572 STKc_cGK_PKG Catalytic 100.0 5.8E-34 1.3E-38 299.1 18.9 242 417-682 1-251 (262)
308 KOG0596 Dual specificity; seri 100.0 7.2E-35 1.6E-39 322.3 12.2 254 407-683 359-627 (677)
309 cd05579 STKc_MAST_like Catalyt 100.0 2.2E-34 4.8E-39 300.2 15.1 244 417-685 1-256 (265)
310 cd06653 STKc_MEKK3_like_1 Cata 100.0 1.2E-33 2.7E-38 297.6 20.6 250 409-682 2-260 (264)
311 cd07850 STKc_JNK Catalytic dom 100.0 9.4E-34 2E-38 312.7 20.4 264 407-683 14-311 (353)
312 KOG0200 Fibroblast/platelet-de 100.0 5.7E-34 1.2E-38 336.8 19.4 268 404-690 291-582 (609)
313 cd06627 STKc_Cdc7_like Catalyt 100.0 1.2E-33 2.7E-38 293.2 19.5 247 410-682 1-250 (254)
314 cd05633 STKc_GRK3 Catalytic do 100.0 7.5E-34 1.6E-38 303.2 18.2 242 416-683 1-255 (279)
315 cd07849 STKc_ERK1_2_like Catal 100.0 4.3E-34 9.4E-39 313.0 16.7 265 407-683 3-292 (336)
316 cd07864 STKc_CDK12 Catalytic d 100.0 1.3E-33 2.9E-38 302.5 19.8 266 406-682 4-298 (302)
317 cd07838 STKc_CDK4_6_like Catal 100.0 2.8E-33 6E-38 296.7 21.7 261 411-682 1-283 (287)
318 cd06618 PKc_MKK7 Catalytic dom 100.0 7.7E-34 1.7E-38 304.8 17.7 252 409-684 15-274 (296)
319 PLN00009 cyclin-dependent kina 100.0 1.1E-33 2.3E-38 302.8 18.7 267 409-683 2-284 (294)
320 cd07852 STKc_MAPK15 Catalytic 100.0 6.9E-34 1.5E-38 311.3 17.5 268 407-683 5-295 (337)
321 KOG0577 Serine/threonine prote 100.0 7.3E-34 1.6E-38 314.6 17.3 243 411-682 28-277 (948)
322 cd07845 STKc_CDK10 Catalytic d 100.0 1.6E-33 3.4E-38 304.2 19.4 267 408-683 6-290 (309)
323 KOG0574 STE20-like serine/thre 100.0 1.7E-35 3.6E-40 306.7 3.4 264 411-699 35-310 (502)
324 KOG0032 Ca2+/calmodulin-depend 100.0 1.4E-33 2.9E-38 314.9 18.7 250 407-683 33-293 (382)
325 cd05577 STKc_GRK Catalytic dom 100.0 2.1E-33 4.6E-38 298.3 19.3 241 417-679 1-245 (277)
326 KOG0610 Putative serine/threon 100.0 6.6E-34 1.4E-38 306.9 15.5 254 409-683 77-392 (459)
327 cd07830 STKc_MAK_like Catalyti 100.0 1.4E-33 3E-38 299.2 17.7 263 411-682 1-279 (283)
328 cd07866 STKc_BUR1 Catalytic do 100.0 1.7E-33 3.7E-38 302.1 18.4 268 408-682 7-307 (311)
329 cd05118 STKc_CMGC Catalytic do 100.0 1.5E-33 3.2E-38 298.2 17.6 261 411-682 1-279 (283)
330 KOG0584 Serine/threonine prote 100.0 1.7E-34 3.7E-39 324.7 10.8 244 414-683 45-296 (632)
331 cd08222 STKc_Nek11 Catalytic d 100.0 1E-33 2.3E-38 296.8 16.1 250 410-682 1-256 (260)
332 cd05581 STKc_PDK1 Catalytic do 100.0 1E-33 2.3E-38 298.4 15.9 249 409-682 1-276 (280)
333 cd07855 STKc_ERK5 Catalytic do 100.0 1.4E-33 3.1E-38 308.8 17.2 267 407-684 3-295 (334)
334 KOG4279 Serine/threonine prote 100.0 3E-34 6.5E-39 321.6 11.5 245 416-683 582-832 (1226)
335 cd05583 STKc_MSK_N N-terminal 100.0 3.4E-33 7.3E-38 298.0 19.2 255 410-686 1-266 (288)
336 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.4E-33 3.1E-38 309.3 16.7 265 407-683 3-291 (337)
337 cd06634 STKc_TAO2 Catalytic do 100.0 3.2E-33 7E-38 302.5 19.1 248 409-685 15-269 (308)
338 cd05611 STKc_Rim15_like Cataly 100.0 2E-33 4.3E-38 294.7 16.8 244 415-685 2-250 (260)
339 cd06657 STKc_PAK4 Catalytic do 100.0 2.3E-33 4.9E-38 301.9 17.3 244 415-683 26-270 (292)
340 PHA02882 putative serine/threo 100.0 3.9E-33 8.4E-38 300.2 19.0 259 408-684 11-293 (294)
341 cd05606 STKc_beta_ARK Catalyti 100.0 5.5E-33 1.2E-37 296.1 19.8 241 416-682 1-254 (278)
342 PHA03210 serine/threonine kina 100.0 1.7E-33 3.6E-38 326.3 17.0 271 407-683 146-454 (501)
343 cd07879 STKc_p38delta_MAPK13 C 100.0 3.5E-33 7.7E-38 307.1 18.3 264 408-687 14-303 (342)
344 cd08226 PK_STRAD_beta Pseudoki 100.0 4E-33 8.7E-38 304.4 18.6 262 415-683 4-308 (328)
345 cd05613 STKc_MSK1_N N-terminal 100.0 7.1E-33 1.5E-37 295.8 19.9 251 410-682 1-267 (290)
346 cd08216 PK_STRAD Pseudokinase 100.0 5.5E-33 1.2E-37 300.1 19.0 262 414-683 7-295 (314)
347 cd06633 STKc_TAO3 Catalytic do 100.0 8.5E-33 1.8E-37 300.2 20.2 244 411-683 23-273 (313)
348 PHA03390 pk1 serine/threonine- 100.0 1.3E-32 2.8E-37 291.9 20.9 249 402-682 7-261 (267)
349 KOG0579 Ste20-like serine/thre 100.0 1.8E-34 3.9E-39 320.5 5.8 249 411-682 34-288 (1187)
350 cd07877 STKc_p38alpha_MAPK14 C 100.0 7.4E-33 1.6E-37 305.1 18.5 271 398-683 6-300 (345)
351 cd07829 STKc_CDK_like Catalyti 100.0 7.8E-33 1.7E-37 292.5 17.7 262 411-682 1-278 (282)
352 cd07834 STKc_MAPK Catalytic do 100.0 4.1E-33 8.9E-38 303.4 15.8 266 410-683 1-289 (330)
353 PTZ00024 cyclin-dependent prot 100.0 8.5E-33 1.8E-37 302.2 18.0 263 409-683 8-313 (335)
354 cd07857 STKc_MPK1 Catalytic do 100.0 1.4E-32 3E-37 300.7 19.7 266 410-683 1-292 (332)
355 KOG4645 MAPKKK (MAP kinase kin 100.0 1.5E-34 3.2E-39 343.5 4.1 254 407-683 1233-1494(1509)
356 KOG0599 Phosphorylase kinase g 100.0 8.1E-34 1.7E-38 291.5 8.9 253 407-683 15-283 (411)
357 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.1E-32 2.4E-37 303.5 18.6 264 404-683 10-298 (343)
358 KOG4250 TANK binding protein k 100.0 7.9E-33 1.7E-37 314.6 15.1 272 411-690 15-313 (732)
359 cd07854 STKc_MAPK4_6 Catalytic 100.0 1.1E-32 2.4E-37 303.2 15.8 267 408-683 4-300 (342)
360 KOG1035 eIF-2alpha kinase GCN2 100.0 3E-33 6.5E-38 331.2 11.7 254 405-682 475-870 (1351)
361 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 2.5E-32 5.4E-37 299.1 18.1 265 404-683 5-288 (328)
362 cd07851 STKc_p38 Catalytic dom 100.0 1.2E-32 2.5E-37 303.1 15.3 261 406-683 12-298 (343)
363 KOG0986 G protein-coupled rece 100.0 3.6E-33 7.7E-38 302.8 10.9 248 408-677 184-435 (591)
364 KOG0033 Ca2+/calmodulin-depend 100.0 1.5E-34 3.3E-39 293.2 0.1 253 407-683 9-267 (355)
365 cd05123 STKc_AGC Catalytic dom 100.0 2.7E-32 5.8E-37 283.3 16.4 236 417-679 1-240 (250)
366 KOG4717 Serine/threonine prote 100.0 1.4E-32 3.1E-37 300.5 13.4 248 408-682 17-269 (864)
367 KOG0586 Serine/threonine prote 100.0 2.9E-32 6.2E-37 306.5 15.2 248 406-683 53-306 (596)
368 KOG0983 Mitogen-activated prot 100.0 8.7E-33 1.9E-37 284.2 8.5 253 398-683 88-349 (391)
369 cd05610 STKc_MASTL Catalytic d 100.0 1.4E-31 3E-36 320.2 19.5 146 408-560 3-152 (669)
370 KOG1006 Mitogen-activated prot 100.0 1E-33 2.2E-38 290.2 0.5 260 398-683 60-327 (361)
371 KOG0690 Serine/threonine prote 100.0 2.7E-32 5.8E-37 285.5 9.5 240 408-675 167-411 (516)
372 smart00220 S_TKc Serine/Threon 100.0 3.5E-31 7.6E-36 270.4 17.0 237 421-682 1-240 (244)
373 cd05576 STKc_RPK118_like Catal 100.0 2.5E-31 5.4E-36 276.8 14.6 222 420-680 4-226 (237)
374 KOG0587 Traf2- and Nck-interac 100.0 3.9E-31 8.5E-36 305.5 16.7 261 399-683 9-282 (953)
375 PLN03224 probable serine/threo 100.0 1.9E-30 4E-35 298.9 19.7 262 407-683 143-500 (507)
376 KOG0666 Cyclin C-dependent kin 100.0 1.7E-31 3.7E-36 278.7 8.1 204 409-616 24-242 (438)
377 PLN03225 Serine/threonine-prot 100.0 3.1E-30 6.8E-35 302.4 17.8 262 407-683 130-450 (566)
378 KOG0607 MAP kinase-interacting 100.0 1.2E-30 2.7E-35 272.9 9.8 267 400-683 74-361 (463)
379 KOG0612 Rho-associated, coiled 100.0 1E-30 2.2E-35 307.8 9.5 258 401-683 67-338 (1317)
380 KOG1151 Tousled-like protein k 100.0 1.2E-30 2.7E-35 281.2 8.9 255 409-681 463-739 (775)
381 KOG0696 Serine/threonine prote 100.0 2.3E-30 4.9E-35 277.6 7.7 241 409-676 349-594 (683)
382 KOG0603 Ribosomal protein S6 k 100.0 8.9E-30 1.9E-34 287.9 10.1 241 407-683 320-563 (612)
383 KOG0662 Cyclin-dependent kinas 100.0 2.1E-29 4.6E-34 245.8 10.5 264 410-682 3-282 (292)
384 KOG0671 LAMMER dual specificit 100.0 1.1E-29 2.3E-34 272.2 8.8 262 407-683 87-406 (415)
385 KOG4236 Serine/threonine prote 100.0 1.5E-29 3.3E-34 277.4 9.6 245 414-683 569-819 (888)
386 KOG0604 MAP kinase-activated p 100.0 2.5E-29 5.3E-34 261.7 10.1 250 407-683 59-322 (400)
387 KOG0984 Mitogen-activated prot 100.0 1.1E-29 2.3E-34 252.9 6.5 203 410-618 47-256 (282)
388 cd00180 PKc Catalytic domain o 100.0 5E-28 1.1E-32 239.9 18.1 210 417-683 1-214 (215)
389 KOG0608 Warts/lats-like serine 100.0 6.9E-29 1.5E-33 276.9 12.6 205 410-621 630-878 (1034)
390 KOG0695 Serine/threonine prote 100.0 2E-28 4.3E-33 257.1 12.6 248 408-675 249-502 (593)
391 KOG1027 Serine/threonine prote 100.0 1E-28 2.2E-33 284.5 11.2 247 411-682 511-766 (903)
392 KOG0669 Cyclin T-dependent kin 100.0 1E-29 2.2E-34 259.0 1.2 266 411-683 19-315 (376)
393 KOG0664 Nemo-like MAPK-related 99.9 4.8E-29 1E-33 256.2 2.9 264 412-684 56-344 (449)
394 KOG0614 cGMP-dependent protein 99.9 3.2E-29 6.9E-34 274.6 1.7 241 410-676 421-665 (732)
395 smart00221 STYKc Protein kinas 99.9 5.3E-27 1.1E-31 238.3 16.7 199 411-616 1-202 (225)
396 KOG1290 Serine/threonine prote 99.9 1.2E-25 2.6E-30 246.6 16.6 133 408-546 77-222 (590)
397 KOG1345 Serine/threonine kinas 99.9 5.4E-26 1.2E-30 234.1 12.1 261 407-691 22-292 (378)
398 KOG0670 U4/U6-associated splic 99.9 2.1E-26 4.5E-31 253.2 7.6 275 399-683 422-746 (752)
399 KOG0576 Mitogen-activated prot 99.9 2.8E-26 6E-31 258.6 6.5 254 407-682 13-270 (829)
400 KOG1152 Signal transduction se 99.9 7.6E-26 1.6E-30 251.6 7.5 196 409-615 561-770 (772)
401 KOG0665 Jun-N-terminal kinase 99.9 1.3E-25 2.8E-30 236.3 8.7 256 409-683 17-310 (369)
402 KOG0668 Casein kinase II, alph 99.9 1.7E-25 3.7E-30 225.7 8.6 259 408-683 37-322 (338)
403 PLN00181 protein SPA1-RELATED; 99.9 1.2E-25 2.6E-30 274.2 7.3 196 461-682 28-264 (793)
404 smart00750 KIND kinase non-cat 99.9 1.6E-24 3.4E-29 214.7 11.1 170 490-690 1-172 (176)
405 KOG1167 Serine/threonine prote 99.9 2.5E-24 5.4E-29 233.8 10.5 267 405-683 32-381 (418)
406 KOG1164 Casein kinase (serine/ 99.9 4.8E-22 1E-26 218.1 20.6 263 410-691 19-301 (322)
407 PRK09188 serine/threonine prot 99.9 1.5E-22 3.2E-27 224.8 14.9 166 406-589 15-195 (365)
408 COG0515 SPS1 Serine/threonine 99.9 1.5E-21 3.2E-26 203.3 21.0 261 411-683 2-275 (384)
409 KOG0195 Integrin-linked kinase 99.9 2.1E-23 4.5E-28 214.8 3.9 244 415-687 196-446 (448)
410 KOG1163 Casein kinase (serine/ 99.8 9.1E-21 2E-25 193.0 9.8 272 400-694 7-291 (341)
411 KOG1165 Casein kinase (serine/ 99.8 8.4E-20 1.8E-24 193.1 14.2 272 408-701 27-313 (449)
412 KOG0590 Checkpoint kinase and 99.8 5.9E-21 1.3E-25 224.6 4.3 254 413-683 322-585 (601)
413 PRK10359 lipopolysaccharide co 99.8 6.8E-20 1.5E-24 191.1 10.9 172 406-608 28-216 (232)
414 cd05147 RIO1_euk RIO kinase fa 99.8 8.9E-20 1.9E-24 185.7 11.2 139 414-562 2-167 (190)
415 KOG1240 Protein kinase contain 99.8 1.3E-20 2.9E-25 222.3 4.4 247 410-683 24-291 (1431)
416 KOG1023 Natriuretic peptide re 99.8 2.9E-19 6.4E-24 202.6 12.7 218 459-689 1-226 (484)
417 cd05145 RIO1_like RIO kinase f 99.8 7.7E-19 1.7E-23 178.4 13.7 139 414-563 2-168 (190)
418 PF14531 Kinase-like: Kinase-l 99.7 7.5E-18 1.6E-22 180.7 12.7 234 410-674 13-288 (288)
419 PRK12274 serine/threonine prot 99.7 6.4E-18 1.4E-22 173.5 11.1 185 412-615 5-208 (218)
420 KOG0603 Ribosomal protein S6 k 99.7 7.9E-19 1.7E-23 199.5 1.9 225 416-677 1-232 (612)
421 KOG1166 Mitotic checkpoint ser 99.7 1.2E-17 2.5E-22 201.3 11.7 199 404-612 693-901 (974)
422 PRK10345 hypothetical protein; 99.7 3E-17 6.5E-22 169.7 12.1 136 413-560 6-157 (210)
423 PRK14879 serine/threonine prot 99.7 7E-17 1.5E-21 165.2 11.6 134 415-561 2-143 (211)
424 cd05144 RIO2_C RIO kinase fami 99.7 1.3E-16 2.7E-21 162.8 12.8 145 402-563 8-176 (198)
425 smart00090 RIO RIO-like kinase 99.7 1.7E-16 3.7E-21 167.2 13.1 143 409-562 28-198 (237)
426 PRK09605 bifunctional UGMP fam 99.7 1.1E-16 2.5E-21 187.4 10.8 137 408-561 332-476 (535)
427 TIGR03724 arch_bud32 Kae1-asso 99.7 1.9E-16 4.1E-21 160.7 10.9 130 416-561 1-138 (199)
428 KOG4158 BRPK/PTEN-induced prot 99.7 6.7E-17 1.5E-21 174.4 6.7 198 463-685 274-512 (598)
429 KOG1033 eIF-2alpha kinase PEK/ 99.6 4.6E-17 1E-21 182.2 2.6 174 479-679 330-508 (516)
430 cd05120 APH_ChoK_like Aminogly 99.6 3.5E-15 7.7E-20 141.4 12.8 135 413-561 2-138 (155)
431 cd05119 RIO RIO kinase family, 99.6 7.1E-15 1.5E-19 147.5 10.9 135 414-562 2-164 (187)
432 KOG0606 Microtubule-associated 99.5 3.1E-15 6.7E-20 177.5 6.2 210 407-675 81-304 (1205)
433 PRK01723 3-deoxy-D-manno-octul 99.5 7.1E-14 1.5E-18 147.5 12.2 135 415-562 37-192 (239)
434 KOG0590 Checkpoint kinase and 99.5 7.6E-15 1.6E-19 173.2 0.9 255 410-682 21-285 (601)
435 TIGR01982 UbiB 2-polyprenylphe 99.4 6.6E-13 1.4E-17 151.9 11.1 145 409-563 118-308 (437)
436 KOG1266 Protein kinase [Signal 99.4 2.3E-13 5E-18 144.7 3.6 205 457-683 119-331 (458)
437 KOG0601 Cyclin-dependent kinas 99.3 3.7E-12 8E-17 145.4 6.1 248 410-682 115-378 (524)
438 cd05151 ChoK Choline Kinase (C 99.3 1.9E-11 4.2E-16 120.3 9.6 131 414-561 3-136 (170)
439 PRK04750 ubiB putative ubiquin 99.2 7.2E-12 1.6E-16 145.7 5.3 148 407-564 118-316 (537)
440 cd05154 ACAD10_11_like Acyl-Co 99.1 3.3E-10 7.1E-15 115.9 12.8 142 415-561 4-206 (223)
441 KOG1243 Protein kinase [Genera 99.1 4.9E-10 1.1E-14 129.5 12.3 166 430-610 34-199 (690)
442 cd05146 RIO3_euk RIO kinase fa 99.0 2.2E-09 4.8E-14 110.0 12.8 135 415-562 3-174 (197)
443 KOG0601 Cyclin-dependent kinas 99.0 2E-10 4.3E-15 131.4 5.6 250 405-686 261-517 (524)
444 KOG3741 Poly(A) ribonuclease s 98.9 1.1E-08 2.4E-13 115.1 13.0 169 422-612 289-474 (655)
445 COG3642 Mn2+-dependent serine/ 98.8 1.8E-08 3.8E-13 101.2 9.5 131 415-561 2-140 (204)
446 KOG0606 Microtubule-associated 98.8 1.3E-09 2.7E-14 130.7 1.3 249 407-678 802-1084(1205)
447 KOG3087 Serine/threonine prote 98.8 2.5E-08 5.4E-13 99.8 10.0 142 413-560 11-164 (229)
448 PRK15123 lipopolysaccharide co 98.7 1.1E-07 2.3E-12 102.4 12.4 140 415-560 28-193 (268)
449 PF01163 RIO1: RIO1 family; I 98.6 1.2E-07 2.6E-12 96.7 9.9 125 424-562 1-156 (188)
450 COG4248 Uncharacterized protei 98.5 5.3E-06 1.2E-10 92.0 17.0 265 413-692 15-305 (637)
451 PF06293 Kdo: Lipopolysacchari 98.4 8.4E-07 1.8E-11 91.6 9.4 107 448-561 54-170 (206)
452 PRK09902 hypothetical protein; 98.4 2.7E-06 5.8E-11 88.1 11.9 139 417-561 26-179 (216)
453 KOG2137 Protein kinase [Signal 98.3 1.9E-07 4.2E-12 108.7 2.8 151 516-682 106-264 (700)
454 COG0478 RIO-like serine/threon 98.3 3.3E-06 7.1E-11 89.7 10.4 135 411-561 93-251 (304)
455 COG0661 AarF Predicted unusual 98.2 3.2E-06 6.9E-11 98.5 9.5 146 409-564 126-317 (517)
456 TIGR02172 Fb_sc_TIGR02172 Fibr 98.2 1.5E-05 3.2E-10 83.8 12.6 141 415-561 7-182 (226)
457 PF01636 APH: Phosphotransfera 98.2 2.2E-05 4.8E-10 80.4 13.3 145 414-561 2-197 (239)
458 KOG0576 Mitogen-activated prot 98.1 6.5E-07 1.4E-11 103.3 -0.7 193 404-615 237-431 (829)
459 cd05150 APH Aminoglycoside 3'- 98.0 2.5E-05 5.4E-10 82.2 10.9 140 417-560 6-192 (244)
460 PF06176 WaaY: Lipopolysacchar 98.0 4.5E-05 9.8E-10 79.4 11.9 138 407-561 29-183 (229)
461 KOG1235 Predicted unusual prot 98.0 1.6E-05 3.5E-10 92.5 9.5 141 415-563 167-356 (538)
462 COG1718 RIO1 Serine/threonine 98.0 9.9E-05 2.2E-09 77.9 13.7 152 398-562 34-216 (268)
463 PF12260 PIP49_C: Protein-kina 97.9 3.3E-05 7.2E-10 78.9 8.9 103 453-560 7-110 (188)
464 PRK10593 hypothetical protein; 97.9 0.00029 6.3E-09 77.0 15.2 79 411-492 16-100 (297)
465 PLN02876 acyl-CoA dehydrogenas 97.8 0.00015 3.2E-09 89.9 14.2 148 414-561 43-257 (822)
466 PF10707 YrbL-PhoP_reg: PhoP r 97.7 0.00023 5E-09 73.4 11.3 128 414-555 6-165 (199)
467 cd05155 APH_ChoK_like_1 Unchar 97.7 0.00022 4.9E-09 74.8 10.6 141 415-561 3-194 (235)
468 cd05157 ETNK_euk Ethanolamine 97.5 0.0005 1.1E-08 71.7 10.8 142 414-560 3-200 (235)
469 TIGR02721 ycfN_thiK thiamine k 97.5 0.00064 1.4E-08 72.2 11.1 139 417-561 4-175 (256)
470 PF13095 FTA2: Kinetochore Sim 97.5 0.0011 2.4E-08 68.4 11.9 125 409-559 37-206 (207)
471 cd05153 HomoserineK_II Homoser 97.4 0.00057 1.2E-08 73.9 9.8 143 414-560 19-204 (296)
472 COG2112 Predicted Ser/Thr prot 97.4 0.00053 1.1E-08 69.1 8.0 127 413-560 26-154 (201)
473 PRK09550 mtnK methylthioribose 97.2 0.0021 4.5E-08 73.1 11.7 76 414-491 31-117 (401)
474 TIGR00938 thrB_alt homoserine 97.2 0.003 6.5E-08 69.1 12.6 159 399-560 7-216 (307)
475 KOG1035 eIF-2alpha kinase GCN2 97.0 0.0015 3.2E-08 80.9 8.5 196 452-684 229-435 (1351)
476 PRK05231 homoserine kinase; Pr 97.0 0.0048 1E-07 67.6 11.9 158 399-560 7-216 (319)
477 cd05156 ChoK_euk Choline Kinas 97.0 0.0045 9.7E-08 67.3 11.4 141 415-560 4-212 (302)
478 PF03881 Fructosamin_kin: Fruc 96.8 0.0099 2.1E-07 64.9 11.4 144 411-558 19-215 (288)
479 cd05152 MPH2' Macrolide 2'-Pho 96.7 0.012 2.5E-07 63.9 11.6 31 531-561 185-216 (276)
480 PLN02236 choline kinase 96.5 0.024 5.3E-07 63.3 12.1 141 415-560 42-230 (344)
481 KOG1826 Ras GTPase activating 96.2 0.0012 2.6E-08 83.2 -0.1 176 437-614 1256-1440(2724)
482 COG3173 Predicted aminoglycosi 96.1 0.048 1E-06 60.3 12.0 138 424-562 40-229 (321)
483 KOG2268 Serine/threonine prote 96.1 0.0052 1.1E-07 67.2 4.4 146 398-560 78-250 (465)
484 KOG2270 Serine/threonine prote 96.0 0.036 7.7E-07 61.8 10.1 137 415-560 150-312 (520)
485 TIGR02906 spore_CotS spore coa 95.7 0.045 9.8E-07 59.4 9.6 65 424-493 11-83 (313)
486 COG2334 Putative homoserine ki 95.7 0.085 1.8E-06 58.7 11.7 137 421-560 37-227 (331)
487 PF01633 Choline_kinase: Choli 95.3 0.047 1E-06 56.2 7.5 124 433-561 2-174 (211)
488 PLN03150 hypothetical protein; 95.0 0.025 5.4E-07 68.3 4.9 69 232-302 462-533 (623)
489 PRK11768 serine/threonine prot 95.0 0.52 1.1E-05 52.2 15.0 94 398-492 10-114 (325)
490 TIGR02904 spore_ysxE spore coa 94.9 0.15 3.1E-06 56.0 10.3 31 531-561 196-226 (309)
491 PLN02756 S-methyl-5-thioribose 94.7 0.41 8.9E-06 54.8 13.4 73 414-489 37-119 (418)
492 COG3001 Uncharacterized protei 94.5 0.45 9.7E-06 50.3 12.0 136 416-556 23-211 (286)
493 TIGR01767 MTRK 5-methylthiorib 94.5 0.18 3.9E-06 56.7 9.7 73 416-490 2-85 (370)
494 PLN02421 phosphotransferase, a 94.2 0.45 9.8E-06 52.9 12.2 141 415-560 20-212 (330)
495 PF01102 Glycophorin_A: Glycop 94.2 0.041 9E-07 52.2 3.3 38 312-349 58-95 (122)
496 PTZ00384 choline kinase; Provi 94.1 0.37 8E-06 54.8 11.4 74 415-493 56-137 (383)
497 PF02958 EcKinase: Ecdysteroid 93.8 0.52 1.1E-05 50.9 11.4 30 532-561 216-250 (294)
498 KOG1093 Predicted protein kina 93.7 0.034 7.3E-07 64.2 2.1 47 450-497 27-74 (725)
499 PRK06148 hypothetical protein; 93.6 0.48 1.1E-05 60.5 12.3 142 415-560 31-235 (1013)
500 COG5072 ALK1 Serine/threonine 93.5 0.091 2E-06 58.7 4.9 55 505-562 317-371 (488)
No 1
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4e-58 Score=509.55 Aligned_cols=290 Identities=57% Similarity=0.946 Sum_probs=257.3
Q ss_pred CcccCCHHHHHHHhCCcceeeeeeecCcEEEEEEEeeCCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeee
Q 003605 395 SAKTFSASEIEKATGNFDASRILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGIC 474 (808)
Q Consensus 395 s~~~fs~~el~~at~~f~~~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~ 474 (808)
..+.|++++|..||++|...++||+|+||.||+|.+++|+.||||++.....+..++|.+|++++.+++|+|||+|+|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 46789999999999999999999999999999999999999999998764433156699999999999999999999999
Q ss_pred eecc-ceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCccee
Q 003605 475 IEEQ-ARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKV 553 (808)
Q Consensus 475 ~~~~-~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL 553 (808)
.+.+ +.+||||||+||+|+++|++.... .|+|.+|++||.++|+||+|||+.+.++|||||||++|||||+++++||
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~--~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKl 218 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGE--PLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKL 218 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCC--CCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEc
Confidence 9998 499999999999999999964433 7999999999999999999999999999999999999999999999999
Q ss_pred cccccccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhc
Q 003605 554 SDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLL 633 (808)
Q Consensus 554 ~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~ 633 (808)
+|||+|+..... .....+...||.+|+||||+..+.++.|+|||||||+|+||+||+.+.+........+++.|++..+
T Consensus 219 sDFGLa~~~~~~-~~~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~ 297 (361)
T KOG1187|consen 219 SDFGLAKLGPEG-DTSVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLL 297 (361)
T ss_pred cCccCcccCCcc-ccceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHH
Confidence 999999754331 1222111179999999999999999999999999999999999999998776666777999998888
Q ss_pred ccccccccccCCCCC-CCCCh-hhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHH
Q 003605 634 TSREGLERIIDPSLG-NDVPF-DSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLVC 688 (808)
Q Consensus 634 ~~~~~l~~ivD~~l~-~~~~~-~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~ 688 (808)
.+. .+.+++|+.+. ..++. +++.++..++.+|++.++++||+|.||+++|+.+.
T Consensus 298 ~~~-~~~eiiD~~l~~~~~~~~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~ 353 (361)
T KOG1187|consen 298 EEG-KLREIVDPRLKEGEYPDEKEVKKLAELALRCLRPDPKERPTMSQVVKELEGIL 353 (361)
T ss_pred HCc-chhheeCCCccCCCCChHHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhc
Confidence 765 78999999987 56664 68999999999999999999999999999996554
No 2
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-46 Score=411.49 Aligned_cols=258 Identities=34% Similarity=0.589 Sum_probs=213.0
Q ss_pred eeeeeecCcEEEEEEEeeCCCEEEEEEeeccc--chhhHHHHHHHHHHhhcccccceeEEeeeeecc-ceEEEEeecCCC
Q 003605 414 SRILGEGGFGLVYSGVLDDGTKVAVKVLKRVD--QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQ-ARCLVYELIPNG 490 (808)
Q Consensus 414 ~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~--~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~-~~~LV~Ey~~~G 490 (808)
.+.||+|+||+||+|.+.....||||++.... ....++|.+|+.+|.+++|||||+|+|+|.+.. ..++|||||++|
T Consensus 46 ~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy~~~G 125 (362)
T KOG0192|consen 46 EEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEYMPGG 125 (362)
T ss_pred hhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEeCCCC
Confidence 35599999999999999843449999997532 222669999999999999999999999999887 799999999999
Q ss_pred CccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCC-cceecccccccccccccccc
Q 003605 491 SVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDF-TPKVSDFGLARSAMDEESRH 569 (808)
Q Consensus 491 sL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~-~vKL~DFGLa~~~~~~~~~~ 569 (808)
+|.++|+.. ....++|..+++||.+||+||.|||+++. |||||||++||||+.++ ++||+|||+++...... .
T Consensus 126 sL~~~l~~~--~~~~l~~~~~l~~aldiArGm~YLH~~~~--iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~--~ 199 (362)
T KOG0192|consen 126 SLSVLLHKK--RKRKLPLKVRLRIALDIARGMEYLHSEGP--IIHRDLKSDNILVDLKGKTLKIADFGLSREKVISK--T 199 (362)
T ss_pred cHHHHHhhc--ccCCCCHHHHHHHHHHHHHHHHHHhcCCC--eeecccChhhEEEcCCCCEEEECCCccceeecccc--c
Confidence 999999854 34579999999999999999999998863 99999999999999997 99999999998643221 2
Q ss_pred cccccccccccccchhhh--cCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCC
Q 003605 570 ISTRVMGTFGYVAPEYAM--TGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSL 647 (808)
Q Consensus 570 ~~~~~~Gt~~Y~APE~l~--~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l 647 (808)
..+...||..|||||++. ...|+.|+||||||++||||+||+.||..... ..+.. .++....
T Consensus 200 ~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~---~~~~~-------------~v~~~~~ 263 (362)
T KOG0192|consen 200 SMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAP---VQVAS-------------AVVVGGL 263 (362)
T ss_pred cccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCH---HHHHH-------------HHHhcCC
Confidence 233468999999999999 56999999999999999999999999975432 11111 1122222
Q ss_pred CCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHhhhh
Q 003605 648 GNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLVCNECDE 693 (808)
Q Consensus 648 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~~~~~~ 693 (808)
+...+.++...+..++.+||+.||++||++.|++..|+.+......
T Consensus 264 Rp~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~ 309 (362)
T KOG0192|consen 264 RPPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISS 309 (362)
T ss_pred CCCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcc
Confidence 3334445678899999999999999999999999999988776543
No 3
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.9e-45 Score=425.55 Aligned_cols=263 Identities=29% Similarity=0.496 Sum_probs=225.8
Q ss_pred CCcceeeeeeecCcEEEEEEEee------CCCEEEEEEeecccch-hhHHHHHHHHHHhhcccccceeEEeeeeeccceE
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD------DGTKVAVKVLKRVDQQ-GGREFLAEVEMLSRLHHRNLVKLIGICIEEQARC 481 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~------dg~~VAVK~lk~~~~~-~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~ 481 (808)
.+....+.||+|+||+||+|... +...||||.||+.... ...+|++|+++|+.|+|+|||+|+|+|.+++.+|
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~ 565 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLC 565 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeE
Confidence 44555678999999999999843 3467999999976555 7889999999999999999999999999999999
Q ss_pred EEEeecCCCCcccccccccc------C----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcc
Q 003605 482 LVYELIPNGSVESHLHGVDK------E----SAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTP 551 (808)
Q Consensus 482 LV~Ey~~~GsL~~~L~~~~~------~----~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~v 551 (808)
||+|||..|+|.+||+.... . ..+|+..+.+.||.|||.||+||-++. +|||||..+|+||.++..|
T Consensus 566 MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~---FVHRDLATRNCLVge~l~V 642 (774)
T KOG1026|consen 566 MVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHH---FVHRDLATRNCLVGENLVV 642 (774)
T ss_pred EEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCc---ccccchhhhhceeccceEE
Confidence 99999999999999974321 1 234899999999999999999999998 9999999999999999999
Q ss_pred eecccccccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhh
Q 003605 552 KVSDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWAR 630 (808)
Q Consensus 552 KL~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~ 630 (808)
||+||||+|.....++.+...+-.-..+||+||.++.++||.+||||||||||||+++ |+.|+.....
T Consensus 643 KIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn----------- 711 (774)
T KOG1026|consen 643 KISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSN----------- 711 (774)
T ss_pred EecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccch-----------
Confidence 9999999999888887777666667889999999999999999999999999999999 9999865332
Q ss_pred hhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHhh
Q 003605 631 PLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLVCNEC 691 (808)
Q Consensus 631 ~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~~~~ 691 (808)
++.++-+-+..+ -..++++..++..|+..||+.+|++||+++||-..|+...+..
T Consensus 712 -----~EVIe~i~~g~l-L~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s 766 (774)
T KOG1026|consen 712 -----QEVIECIRAGQL-LSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQAS 766 (774)
T ss_pred -----HHHHHHHHcCCc-ccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcC
Confidence 222332333333 3467888999999999999999999999999999999775543
No 4
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8e-45 Score=403.43 Aligned_cols=254 Identities=32% Similarity=0.490 Sum_probs=218.4
Q ss_pred eeeeeeecCcEEEEEEEeeCCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecCCCCc
Q 003605 413 ASRILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIPNGSV 492 (808)
Q Consensus 413 ~~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~~GsL 492 (808)
..+.||+|-||.||.|.++....||||.++.. ....++|.+|+++|++|+|+|||+|+|+|..++.++||||||++|+|
T Consensus 210 l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~-~m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~~GsL 288 (468)
T KOG0197|consen 210 LIRELGSGQFGEVWLGKWNGSTKVAVKTIKEG-SMSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMPKGSL 288 (468)
T ss_pred HHHHhcCCccceEEEEEEcCCCcccceEEecc-ccChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecccCcH
Confidence 35689999999999999997779999999864 34457899999999999999999999999998899999999999999
Q ss_pred cccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccccccccc
Q 003605 493 ESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRHIST 572 (808)
Q Consensus 493 ~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~~~~ 572 (808)
.+||+. ..+..++..+.+.++.|||+||+||++++ +|||||.++||||+++..+||+||||||...+ +......
T Consensus 289 l~yLr~--~~~~~l~~~~Ll~~a~qIaeGM~YLes~~---~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d-~~Y~~~~ 362 (468)
T KOG0197|consen 289 LDYLRT--REGGLLNLPQLLDFAAQIAEGMAYLESKN---YIHRDLAARNILVDEDLVVKISDFGLARLIGD-DEYTASE 362 (468)
T ss_pred HHHhhh--cCCCccchHHHHHHHHHHHHHHHHHHhCC---ccchhhhhhheeeccCceEEEcccccccccCC-CceeecC
Confidence 999975 34557889999999999999999999998 99999999999999999999999999994433 3333444
Q ss_pred ccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCCCC
Q 003605 573 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGNDV 651 (808)
Q Consensus 573 ~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~~~ 651 (808)
...-...|.|||.+..+.|+.|||||||||+||||+| |+.|+..... ..+-+.++...+-..
T Consensus 363 ~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn-----------------~ev~~~le~GyRlp~ 425 (468)
T KOG0197|consen 363 GGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSN-----------------EEVLELLERGYRLPR 425 (468)
T ss_pred CCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCH-----------------HHHHHHHhccCcCCC
Confidence 4455778999999999999999999999999999999 9999864321 112234455555667
Q ss_pred ChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHh
Q 003605 652 PFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLVCNE 690 (808)
Q Consensus 652 ~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~~~ 690 (808)
|..+...+.+|+..||+.+|++|||++.+...|+++...
T Consensus 426 P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~~ 464 (468)
T KOG0197|consen 426 PEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFTS 464 (468)
T ss_pred CCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhhc
Confidence 788899999999999999999999999999999887553
No 5
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=2e-44 Score=385.17 Aligned_cols=256 Identities=29% Similarity=0.425 Sum_probs=213.9
Q ss_pred cCCHHHHHHHhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeec-ccchhhHHHHHHHHHHhhcccccceeEEeeee
Q 003605 398 TFSASEIEKATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKR-VDQQGGREFLAEVEMLSRLHHRNLVKLIGICI 475 (808)
Q Consensus 398 ~fs~~el~~at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~-~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~ 475 (808)
.+++.||+.. +.||+|..|+|||+.++ +++.+|+|.+.. .+....+++.+|++++++.+|||||.++|.|.
T Consensus 75 ~i~~~dle~~-------~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~ 147 (364)
T KOG0581|consen 75 GISLSDLERL-------GVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFY 147 (364)
T ss_pred ccCHHHhhhh-------hhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEE
Confidence 3566676654 68999999999999987 788999999953 45566789999999999999999999999999
Q ss_pred ecc-ceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCcEEeeeecccCeeecCCCccee
Q 003605 476 EEQ-ARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHE-DSSPRVIHRDFKSSNILLEHDFTPKV 553 (808)
Q Consensus 476 ~~~-~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~-~~~p~IiHrDIKpsNILLd~~~~vKL 553 (808)
..+ ...++||||++|||++++... ..+++...-+|+.++++||.|||+ ++ ||||||||+||||+..|++||
T Consensus 148 ~~~~~isI~mEYMDgGSLd~~~k~~----g~i~E~~L~~ia~~VL~GL~YLh~~~~---IIHRDIKPsNlLvNskGeVKi 220 (364)
T KOG0581|consen 148 SNGEEISICMEYMDGGSLDDILKRV----GRIPEPVLGKIARAVLRGLSYLHEERK---IIHRDIKPSNLLVNSKGEVKI 220 (364)
T ss_pred eCCceEEeehhhcCCCCHHHHHhhc----CCCCHHHHHHHHHHHHHHHHHHhhccC---eeeccCCHHHeeeccCCCEEe
Confidence 998 499999999999999999632 458999999999999999999996 55 999999999999999999999
Q ss_pred cccccccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhc
Q 003605 554 SDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLL 633 (808)
Q Consensus 554 ~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~ 633 (808)
||||.++.+.+. .....+||..|||||.+++..|+.++||||||+.|+|+++|+.|+.... ....+|+
T Consensus 221 cDFGVS~~lvnS----~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~----~~~~~~~---- 288 (364)
T KOG0581|consen 221 CDFGVSGILVNS----IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPN----PPYLDIF---- 288 (364)
T ss_pred ccccccHHhhhh----hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcC----CCCCCHH----
Confidence 999999876443 4456789999999999999999999999999999999999999996541 1112222
Q ss_pred ccccccccccCCCCCCCCCh-hhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 634 TSREGLERIIDPSLGNDVPF-DSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 634 ~~~~~l~~ivD~~l~~~~~~-~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
+.+..|++..- ...+. ....++..++..||++||.+||++.|++++
T Consensus 289 ---~Ll~~Iv~~pp-P~lP~~~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~H 335 (364)
T KOG0581|consen 289 ---ELLCAIVDEPP-PRLPEGEFSPEFRSFVSCCLRKDPSERPSAKQLLQH 335 (364)
T ss_pred ---HHHHHHhcCCC-CCCCcccCCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 22333444211 12233 377899999999999999999999999875
No 6
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=6.3e-43 Score=433.83 Aligned_cols=268 Identities=29% Similarity=0.529 Sum_probs=218.6
Q ss_pred CCHHHHHHHhCCcceeeeeeecCcEEEEEEEe-eCCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeec
Q 003605 399 FSASEIEKATGNFDASRILGEGGFGLVYSGVL-DDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEE 477 (808)
Q Consensus 399 fs~~el~~at~~f~~~~~LG~G~fG~VYkg~l-~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~ 477 (808)
++++++. ..|...++||+|+||.||+|+. .++..||||+++..... ..+|++++++++|||||+++|+|.+.
T Consensus 683 ~~~~~~~---~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~----~~~~~~~l~~l~HpnIv~~~~~~~~~ 755 (968)
T PLN00113 683 ITINDIL---SSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI----PSSEIADMGKLQHPNIVKLIGLCRSE 755 (968)
T ss_pred hhHHHHH---hhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc----cHHHHHHHhhCCCCCcceEEEEEEcC
Confidence 4455544 4567788999999999999997 47899999998754322 23568899999999999999999999
Q ss_pred cceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccc
Q 003605 478 QARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFG 557 (808)
Q Consensus 478 ~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFG 557 (808)
+..++||||+++|+|.++++ .++|.++.+|+.|+|+||+|||..+.++|+||||||+||+++.++..++. ||
T Consensus 756 ~~~~lv~Ey~~~g~L~~~l~-------~l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~ 827 (968)
T PLN00113 756 KGAYLIHEYIEGKNLSEVLR-------NLSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LS 827 (968)
T ss_pred CCCEEEEeCCCCCcHHHHHh-------cCCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-ec
Confidence 99999999999999999995 38999999999999999999997766779999999999999999888875 66
Q ss_pred cccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccccc
Q 003605 558 LARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSRE 637 (808)
Q Consensus 558 La~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~ 637 (808)
....... .....++..|+|||++.+..++.|+|||||||++|||+||+.||+.... ....++.|++..... .
T Consensus 828 ~~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el~tg~~p~~~~~~-~~~~~~~~~~~~~~~-~ 899 (968)
T PLN00113 828 LPGLLCT------DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIELLTGKSPADAEFG-VHGSIVEWARYCYSD-C 899 (968)
T ss_pred ccccccc------CCCccccccccCcccccCCCCCcccchhhHHHHHHHHHhCCCCCCcccC-CCCcHHHHHHHhcCc-c
Confidence 5543211 1223578999999999999999999999999999999999999964332 345677887654432 2
Q ss_pred ccccccCCCCCCC--CChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHH
Q 003605 638 GLERIIDPSLGND--VPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLVCN 689 (808)
Q Consensus 638 ~l~~ivD~~l~~~--~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~~ 689 (808)
....++|+.+... .+.++..++.+++.+||+.+|++||+|+||+++|+.+.+
T Consensus 900 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L~~~~~ 953 (968)
T PLN00113 900 HLDMWIDPSIRGDVSVNQNEIVEVMNLALHCTATDPTARPCANDVLKTLESASR 953 (968)
T ss_pred chhheeCccccCCCCccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHHHHhhc
Confidence 3455667766443 345677789999999999999999999999999997755
No 7
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.7e-42 Score=388.50 Aligned_cols=248 Identities=29% Similarity=0.450 Sum_probs=211.8
Q ss_pred CCcceeeeeeecCcEEEEEEEe-eCCCEEEEEEeec---ccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEE
Q 003605 409 GNFDASRILGEGGFGLVYSGVL-DDGTKVAVKVLKR---VDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVY 484 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l-~dg~~VAVK~lk~---~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~ 484 (808)
.+|...++||+|||+.+|+++. ..|+.||+|++.+ ......+...+||+|.+.|+|||||+|+++|++.++.|||.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5788999999999999999997 7899999999965 23445677899999999999999999999999999999999
Q ss_pred eecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccc
Q 003605 485 ELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMD 564 (808)
Q Consensus 485 Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~ 564 (808)
|+|++|+|.++++ .+..+++.++..+..||+.||.|||+++ |||||||..|+||+++.++||+|||||..+..
T Consensus 98 ELC~~~sL~el~K----rrk~ltEpEary~l~QIv~GlkYLH~~~---IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~ 170 (592)
T KOG0575|consen 98 ELCHRGSLMELLK----RRKPLTEPEARYFLRQIVEGLKYLHSLG---IIHRDLKLGNLFLNENMNVKIGDFGLATQLEY 170 (592)
T ss_pred EecCCccHHHHHH----hcCCCCcHHHHHHHHHHHHHHHHHHhcC---ceecccchhheeecCcCcEEecccceeeeecC
Confidence 9999999999985 4567999999999999999999999998 99999999999999999999999999987754
Q ss_pred ccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccC
Q 003605 565 EESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIID 644 (808)
Q Consensus 565 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD 644 (808)
++.+ ....+||+.|+|||++.....+..+||||+|||||-||+|++||+..... +.+..+..
T Consensus 171 ~~Er--k~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~vk----------------ety~~Ik~ 232 (592)
T KOG0575|consen 171 DGER--KKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTVK----------------ETYNKIKL 232 (592)
T ss_pred cccc--cceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchHH----------------HHHHHHHh
Confidence 4333 34679999999999999989999999999999999999999999753211 11111211
Q ss_pred CCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 645 PSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 645 ~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
... ..|.....+..+||.++|+.||.+||++++|+..
T Consensus 233 ~~Y--~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~h 269 (592)
T KOG0575|consen 233 NEY--SMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLDH 269 (592)
T ss_pred cCc--ccccccCHHHHHHHHHHhcCCcccCCCHHHHhcC
Confidence 111 1233455678899999999999999999999864
No 8
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-43 Score=398.67 Aligned_cols=266 Identities=27% Similarity=0.459 Sum_probs=224.9
Q ss_pred CcceeeeeeecCcEEEEEEEee-C---CCEEEEEEeecc-cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEE
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-D---GTKVAVKVLKRV-DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVY 484 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-d---g~~VAVK~lk~~-~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~ 484 (808)
...++++||.|.||.||+|+++ . ...||||.||.. .+...++|+.|+.||+++.||||++|.|+.......++|.
T Consensus 630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiT 709 (996)
T KOG0196|consen 630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIIT 709 (996)
T ss_pred heEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEh
Confidence 4557899999999999999986 2 356999999974 4555679999999999999999999999999999999999
Q ss_pred eecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccc
Q 003605 485 ELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMD 564 (808)
Q Consensus 485 Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~ 564 (808)
|||+||+|+.||+..+ ..+.|.+..-++.+||.||.||-+.+ +|||||.++|||++.+..+||+||||+|.+.+
T Consensus 710 EyMENGsLDsFLR~~D---GqftviQLVgMLrGIAsGMkYLsdm~---YVHRDLAARNILVNsnLvCKVsDFGLSRvled 783 (996)
T KOG0196|consen 710 EYMENGSLDSFLRQND---GQFTVIQLVGMLRGIASGMKYLSDMN---YVHRDLAARNILVNSNLVCKVSDFGLSRVLED 783 (996)
T ss_pred hhhhCCcHHHHHhhcC---CceEeehHHHHHHHHHHHhHHHhhcC---chhhhhhhhheeeccceEEEeccccceeeccc
Confidence 9999999999998654 34899999999999999999999998 99999999999999999999999999997655
Q ss_pred cccccccccc--ccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhccccccccc
Q 003605 565 EESRHISTRV--MGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLER 641 (808)
Q Consensus 565 ~~~~~~~~~~--~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ 641 (808)
+. ....+.. .-..+|.|||.+..+++|.+|||||||+||||.++ |.+||-... +. .+-.
T Consensus 784 d~-~~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmS----------------NQ-dVIk 845 (996)
T KOG0196|consen 784 DP-EAAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMS----------------NQ-DVIK 845 (996)
T ss_pred CC-CccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccc----------------hH-HHHH
Confidence 43 2222222 22578999999999999999999999999999988 999984321 11 1222
Q ss_pred ccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHhhhhhhhcCC
Q 003605 642 IIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLVCNECDEAKEVGS 699 (808)
Q Consensus 642 ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~~~~~~~~~~~~ 699 (808)
.++..++-..|+++...|.+|++.||++|-.+||++.||+..|.++++..+.-+....
T Consensus 846 aIe~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP~SLk~~~~ 903 (996)
T KOG0196|consen 846 AIEQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNPNSLKTIAP 903 (996)
T ss_pred HHHhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCchhhcccCC
Confidence 3455566677889999999999999999999999999999999999887665544443
No 9
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=2.6e-42 Score=371.73 Aligned_cols=201 Identities=31% Similarity=0.528 Sum_probs=180.7
Q ss_pred hCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc--cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEE
Q 003605 408 TGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV--DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVY 484 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~--~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~ 484 (808)
.++|...+.||+|+||+||+|+++ ++..||||.+... .....+....||++|+.++|+|||+|++++..++..||||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 467888888999999999999976 7899999999754 5566778899999999999999999999999999999999
Q ss_pred eecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCC------Ccceeccccc
Q 003605 485 ELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHD------FTPKVSDFGL 558 (808)
Q Consensus 485 Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~------~~vKL~DFGL 558 (808)
|||.+|+|.+||+. ...+++.+...++.|+|.||++||+++ ||||||||.||||+.. -.+||+|||+
T Consensus 89 EyC~gGDLs~yi~~----~~~l~e~t~r~Fm~QLA~alq~L~~~~---IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGf 161 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRR----RGRLPEATARHFMQQLASALQFLHENN---IIHRDLKPQNILLSTTARNDTSPVLKIADFGF 161 (429)
T ss_pred EeCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCcceEEeccCCCCCCCceEEecccch
Confidence 99999999999973 336999999999999999999999998 9999999999999764 4589999999
Q ss_pred ccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCC
Q 003605 559 ARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQ 618 (808)
Q Consensus 559 a~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~ 618 (808)
||.+.. .......+|++-|||||+++.++|+.|+|+||.|+||||+++|+.||+...
T Consensus 162 AR~L~~---~~~a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~t 218 (429)
T KOG0595|consen 162 ARFLQP---GSMAETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAET 218 (429)
T ss_pred hhhCCc---hhHHHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCccccC
Confidence 998753 334456889999999999999999999999999999999999999997543
No 10
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=1.2e-41 Score=372.37 Aligned_cols=265 Identities=26% Similarity=0.428 Sum_probs=207.9
Q ss_pred HhCCcceeeeeeecCcEEEEEEEe------eCCCEEEEEEeeccc-chhhHHHHHHHHHHhhc-ccccceeEEeeeeecc
Q 003605 407 ATGNFDASRILGEGGFGLVYSGVL------DDGTKVAVKVLKRVD-QQGGREFLAEVEMLSRL-HHRNLVKLIGICIEEQ 478 (808)
Q Consensus 407 at~~f~~~~~LG~G~fG~VYkg~l------~dg~~VAVK~lk~~~-~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~~~~~~ 478 (808)
..++|++.++||+|+||.||+|.. .+++.||||+++... ....+.+.+|++++.++ +|+||++++++|...+
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN 84 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence 356789999999999999999974 235679999997532 33456799999999999 8999999999987654
Q ss_pred -ceEEEEeecCCCCcccccccccc--------------------------------------------------------
Q 003605 479 -ARCLVYELIPNGSVESHLHGVDK-------------------------------------------------------- 501 (808)
Q Consensus 479 -~~~LV~Ey~~~GsL~~~L~~~~~-------------------------------------------------------- 501 (808)
..++||||+++|+|.++++....
T Consensus 85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T cd05102 85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD 164 (338)
T ss_pred CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence 57899999999999999864221
Q ss_pred --CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccccccccccccccc
Q 003605 502 --ESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRHISTRVMGTFG 579 (808)
Q Consensus 502 --~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~~~~~~~Gt~~ 579 (808)
....+++.++++++.|+++||+|||+.+ |+||||||+|||+++++.+||+|||+++...............++..
T Consensus 165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~ 241 (338)
T cd05102 165 DLWKSPLTMEDLICYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLK 241 (338)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHHHCC---EECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCcc
Confidence 0235889999999999999999999988 99999999999999999999999999986533222222223446788
Q ss_pred cccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCCCCChhhHHH
Q 003605 580 YVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGNDVPFDSVAK 658 (808)
Q Consensus 580 Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~~~~~~~~~~ 658 (808)
|+|||++.+..++.++|||||||+||||++ |..||...... ..+.. .+.... ....+......
T Consensus 242 y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~--~~~~~----~~~~~~----------~~~~~~~~~~~ 305 (338)
T cd05102 242 WMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIN--EEFCQ----RLKDGT----------RMRAPENATPE 305 (338)
T ss_pred ccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCcc--HHHHH----HHhcCC----------CCCCCCCCCHH
Confidence 999999999999999999999999999997 99999653321 11111 011000 01112234467
Q ss_pred HHHHHHHccccCCCCCCCHHHHHHHHHHHHHh
Q 003605 659 VAAIASMCVQPEVQHRPFMGEVVQALKLVCNE 690 (808)
Q Consensus 659 l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~~~ 690 (808)
+.+|+.+||+.||++||++.||++.|+.+..+
T Consensus 306 l~~li~~cl~~dp~~RPs~~el~~~l~~~~~~ 337 (338)
T cd05102 306 IYRIMLACWQGDPKERPTFSALVEILGDLLQE 337 (338)
T ss_pred HHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 89999999999999999999999999988654
No 11
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.7e-43 Score=362.89 Aligned_cols=256 Identities=27% Similarity=0.425 Sum_probs=211.5
Q ss_pred CcceeeeeeecCcEEEEEEE-eeCCCEEEEEEeec--ccchhhHHHHHHHHHHhhcccccceeEEee-eeeccc-eEEEE
Q 003605 410 NFDASRILGEGGFGLVYSGV-LDDGTKVAVKVLKR--VDQQGGREFLAEVEMLSRLHHRNLVKLIGI-CIEEQA-RCLVY 484 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~-l~dg~~VAVK~lk~--~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~-~~~~~~-~~LV~ 484 (808)
+|.+++.||+|.||+|||+. +.+|..||.|.++- .+....++...|+.+|++|+|||||+++++ +.++.+ ++|||
T Consensus 20 ~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlnivm 99 (375)
T KOG0591|consen 20 DYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNIVM 99 (375)
T ss_pred HHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHHHH
Confidence 46677899999999999998 55899999999873 456667789999999999999999999994 555555 79999
Q ss_pred eecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCc--EEeeeecccCeeecCCCcceeccccccccc
Q 003605 485 ELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPR--VIHRDFKSSNILLEHDFTPKVSDFGLARSA 562 (808)
Q Consensus 485 Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~--IiHrDIKpsNILLd~~~~vKL~DFGLa~~~ 562 (808)
|||..|+|...++...+.+..+++.++|+++.|+++||..+|..- ++ |+||||||.||+|+.+|.+||+||||++.+
T Consensus 100 E~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~-~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l 178 (375)
T KOG0591|consen 100 ELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKI-PRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFL 178 (375)
T ss_pred HhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccc-cccceeeccCcchheEEcCCCceeeccchhHhHh
Confidence 999999999999888888889999999999999999999999842 33 999999999999999999999999999977
Q ss_pred ccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccc
Q 003605 563 MDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERI 642 (808)
Q Consensus 563 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~i 642 (808)
... .......+||+.||+||.+....|+.||||||+||++|||+.-+.||... ++...-..+.. .
T Consensus 179 ~s~--~tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~------n~~~L~~KI~q-g------ 243 (375)
T KOG0591|consen 179 SSK--TTFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD------NLLSLCKKIEQ-G------ 243 (375)
T ss_pred cch--hHHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc------cHHHHHHHHHc-C------
Confidence 543 23345678999999999999999999999999999999999999999642 33332222111 0
Q ss_pred cCCCCCCCCC-hhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 003605 643 IDPSLGNDVP-FDSVAKVAAIASMCVQPEVQHRPFMGEVVQALK 685 (808)
Q Consensus 643 vD~~l~~~~~-~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le 685 (808)
.+ ...+ .-++..+..|+..|+..|++.||+.-.+++.+.
T Consensus 244 ---d~-~~~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di~ 283 (375)
T KOG0591|consen 244 ---DY-PPLPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDIQ 283 (375)
T ss_pred ---CC-CCCcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHHH
Confidence 00 1122 456788999999999999999998655544443
No 12
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-40 Score=396.11 Aligned_cols=265 Identities=30% Similarity=0.491 Sum_probs=223.0
Q ss_pred hCCcceeeeeeecCcEEEEEEEee--CCC----EEEEEEeecc-cchhhHHHHHHHHHHhhcccccceeEEeeeeeccce
Q 003605 408 TGNFDASRILGEGGFGLVYSGVLD--DGT----KVAVKVLKRV-DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQAR 480 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l~--dg~----~VAVK~lk~~-~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~ 480 (808)
..+....+.||+|.||.||+|.+. +|. .||||.+++. +.+...+|++|..+|++++|||||+++|+|.+....
T Consensus 691 ~~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~ 770 (1025)
T KOG1095|consen 691 RKNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPP 770 (1025)
T ss_pred hhheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCc
Confidence 345667789999999999999975 343 4899999864 566778999999999999999999999999999999
Q ss_pred EEEEeecCCCCcccccccccc---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccc
Q 003605 481 CLVYELIPNGSVESHLHGVDK---ESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFG 557 (808)
Q Consensus 481 ~LV~Ey~~~GsL~~~L~~~~~---~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFG 557 (808)
++++|||++|+|..||+..+. ....|...+.+.|+.|||+|+.||++++ +|||||.++|+||++...+||+|||
T Consensus 771 ~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~---fvHRDLAaRNCLL~~~r~VKIaDFG 847 (1025)
T KOG1095|consen 771 LILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKH---FVHRDLAARNCLLDERRVVKIADFG 847 (1025)
T ss_pred EEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCC---CcCcchhhhheeecccCcEEEcccc
Confidence 999999999999999986532 2456899999999999999999999998 9999999999999999999999999
Q ss_pred cccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhcccc
Q 003605 558 LARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSR 636 (808)
Q Consensus 558 La~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~ 636 (808)
||+...+.++.......+-...|||||.++++.|+.|+|||||||+|||++| |..||...... +-+..|.+ .
T Consensus 848 lArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~--~v~~~~~~-----g 920 (1025)
T KOG1095|consen 848 LARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNF--EVLLDVLE-----G 920 (1025)
T ss_pred hhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchH--HHHHHHHh-----C
Confidence 9997766666555555455689999999999999999999999999999999 99999643221 11111111 1
Q ss_pred cccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHhhh
Q 003605 637 EGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLVCNECD 692 (808)
Q Consensus 637 ~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~~~~~ 692 (808)
. +-+.+..+...+.+++.+||+.+|++||++..|++.+..+.+...
T Consensus 921 g----------RL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~~ 966 (1025)
T KOG1095|consen 921 G----------RLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAAL 966 (1025)
T ss_pred C----------ccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhhc
Confidence 1 223566778899999999999999999999999999998877654
No 13
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=6.7e-41 Score=360.25 Aligned_cols=252 Identities=27% Similarity=0.385 Sum_probs=202.2
Q ss_pred HhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccc-------hhhHHHHHHHHHHhhcccccceeEEeeeeecc
Q 003605 407 ATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQ-------QGGREFLAEVEMLSRLHHRNLVKLIGICIEEQ 478 (808)
Q Consensus 407 at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~-------~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~ 478 (808)
..+.|.+.+.||+|+||.|-+|... +|+.||||++++... .......+|+++|++|+|||||++.+++...+
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 4466788899999999999999854 899999999975211 12234579999999999999999999999999
Q ss_pred ceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCC---Ccceecc
Q 003605 479 ARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHD---FTPKVSD 555 (808)
Q Consensus 479 ~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~---~~vKL~D 555 (808)
..|||+||+++|.|.+++-. ...+.+.....++.|++.|+.|||+.+ |+||||||+||||..+ ..+||+|
T Consensus 250 s~YmVlE~v~GGeLfd~vv~----nk~l~ed~~K~~f~Qll~avkYLH~~G---I~HRDiKPeNILl~~~~e~~llKItD 322 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVA----NKYLREDLGKLLFKQLLTAVKYLHSQG---IIHRDIKPENILLSNDAEDCLLKITD 322 (475)
T ss_pred ceEEEEEEecCccHHHHHHh----ccccccchhHHHHHHHHHHHHHHHHcC---cccccCCcceEEeccCCcceEEEecc
Confidence 99999999999999999853 345777888899999999999999999 9999999999999665 7899999
Q ss_pred cccccccccccccccccccccccccccchhhhcCCC---ccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhh
Q 003605 556 FGLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHL---LVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPL 632 (808)
Q Consensus 556 FGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~---s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~ 632 (808)
||+|+... ........+||+.|.|||++.+..+ ..|.|+||+|||||-+++|..||...... ..+.
T Consensus 323 FGlAK~~g---~~sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~--~sl~------ 391 (475)
T KOG0615|consen 323 FGLAKVSG---EGSFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTD--PSLK------ 391 (475)
T ss_pred cchhhccc---cceehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCC--ccHH------
Confidence 99999764 2334456789999999999987643 34789999999999999999999753321 1111
Q ss_pred cccccccccccCCCCC--CCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 633 LTSREGLERIIDPSLG--NDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 633 ~~~~~~l~~ivD~~l~--~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
+++..-.+. ...-.+...+..+++.+||..||++||++.|+++.
T Consensus 392 -------eQI~~G~y~f~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~h 437 (475)
T KOG0615|consen 392 -------EQILKGRYAFGPLQWDRISEEALDLINWMLVVDPENRPSADEALNH 437 (475)
T ss_pred -------HHHhcCcccccChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhcC
Confidence 111111110 01113456788999999999999999999999875
No 14
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=9.3e-40 Score=350.22 Aligned_cols=260 Identities=19% Similarity=0.364 Sum_probs=206.9
Q ss_pred CcccCCHHHHHHHhCCcceeeeeeecCcEEEEEEEeeCCCEEEEEEeecccchh---hHHHHHHHHHHhhcccccceeEE
Q 003605 395 SAKTFSASEIEKATGNFDASRILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQG---GREFLAEVEMLSRLHHRNLVKLI 471 (808)
Q Consensus 395 s~~~fs~~el~~at~~f~~~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~~---~~~f~~Ei~iL~~L~HpNIV~L~ 471 (808)
+.+.++.++++.. ....||+|++|.||+|.+ +|+.||||+++...... .+.|.+|+++|.+++|+||++++
T Consensus 11 ~~~~i~~~~i~~~-----~~~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~ 84 (283)
T PHA02988 11 DIKCIESDDIDKY-----TSVLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIY 84 (283)
T ss_pred cceecCHHHcCCC-----CCeEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEe
Confidence 3455677776322 236799999999999998 58999999997543322 46788999999999999999999
Q ss_pred eeeee----ccceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCcEEeeeecccCeeec
Q 003605 472 GICIE----EQARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHED-SSPRVIHRDFKSSNILLE 546 (808)
Q Consensus 472 g~~~~----~~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~-~~p~IiHrDIKpsNILLd 546 (808)
|++.+ ....++||||+++|+|.++++. ...++|...++++.+++.||+|||+. + ++||||||+|||++
T Consensus 85 g~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~----~~~~~~~~~~~i~~~i~~~l~~lH~~~~---~~Hrdlkp~nill~ 157 (283)
T PHA02988 85 GFIIDIVDDLPRLSLILEYCTRGYLREVLDK----EKDLSFKTKLDMAIDCCKGLYNLYKYTN---KPYKNLTSVSFLVT 157 (283)
T ss_pred eeEEecccCCCceEEEEEeCCCCcHHHHHhh----CCCCChhHHHHHHHHHHHHHHHHHhcCC---CCCCcCChhhEEEC
Confidence 99877 3467899999999999999963 24689999999999999999999985 5 78999999999999
Q ss_pred CCCcceecccccccccccccccccccccccccccccchhhhc--CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcch
Q 003605 547 HDFTPKVSDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMT--GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQEN 624 (808)
Q Consensus 547 ~~~~vKL~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~--~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~ 624 (808)
+++.+||+|||+++...... ....|+..|+|||++.+ ..++.++|||||||++|||++|+.||..... ..
T Consensus 158 ~~~~~kl~dfg~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~---~~ 229 (283)
T PHA02988 158 ENYKLKIICHGLEKILSSPP-----FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTT---KE 229 (283)
T ss_pred CCCcEEEcccchHhhhcccc-----ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCH---HH
Confidence 99999999999987543221 23457889999999876 6889999999999999999999999974321 11
Q ss_pred hHHhhhhhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHH
Q 003605 625 LVAWARPLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLVC 688 (808)
Q Consensus 625 lv~w~~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~ 688 (808)
+... .... ......+......+.+++.+||+.||++||++.||++.|+.+.
T Consensus 230 ~~~~---i~~~----------~~~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~ 280 (283)
T PHA02988 230 IYDL---IINK----------NNSLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYK 280 (283)
T ss_pred HHHH---HHhc----------CCCCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHH
Confidence 1111 1110 0111122234567999999999999999999999999998764
No 15
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=6.1e-40 Score=363.12 Aligned_cols=265 Identities=25% Similarity=0.439 Sum_probs=220.1
Q ss_pred hCCcceeeeeeecCcEEEEEEEeeCCCEEEEEEeeccc-chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEee
Q 003605 408 TGNFDASRILGEGGFGLVYSGVLDDGTKVAVKVLKRVD-QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~-~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
.....+.++||+|-||.|..+....+..||||+++... ....++|.+||++|.+|+|||||+|+|+|..++.+|+|+||
T Consensus 537 Rs~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EY 616 (807)
T KOG1094|consen 537 RSRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEY 616 (807)
T ss_pred hhheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHH
Confidence 34556678999999999999999888999999998654 44458999999999999999999999999999999999999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEE 566 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~ 566 (808)
|++|+|.+||...... .++-...++|+.|||.||+||.+.+ +|||||.++|||+|.++++||+|||++|.+...+
T Consensus 617 mEnGDLnqFl~aheap--t~~t~~~vsi~tqiasgmaYLes~n---fVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~ 691 (807)
T KOG1094|consen 617 MENGDLNQFLSAHELP--TAETAPGVSICTQIASGMAYLESLN---FVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGD 691 (807)
T ss_pred HhcCcHHHHHHhccCc--ccccchhHHHHHHHHHHHHHHHhhc---hhhccccccceeecCcccEEecCcccccccccCC
Confidence 9999999999754322 2455677889999999999999887 9999999999999999999999999999888888
Q ss_pred ccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh--CCCCCCCCCCCCcchhHHhhhhhcccccccccccC
Q 003605 567 SRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS--GRKPVDMTQPPGQENLVAWARPLLTSREGLERIID 644 (808)
Q Consensus 567 ~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT--G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD 644 (808)
+.++..+.+-..+|||+|.+..++++.+||||+|||.|||+++ ...||..... ++.++-+..++..... ..
T Consensus 692 yy~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~---e~vven~~~~~~~~~~-~~--- 764 (807)
T KOG1094|consen 692 YYRVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTD---EQVVENAGEFFRDQGR-QV--- 764 (807)
T ss_pred ceeeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhH---HHHHHhhhhhcCCCCc-ce---
Confidence 8887777788899999999999999999999999999999866 7788864332 2333332222221111 11
Q ss_pred CCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 003605 645 PSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLV 687 (808)
Q Consensus 645 ~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i 687 (808)
.-..|.-+...+.+++.+||+.|-++||+++++...|++.
T Consensus 765 ---~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 765 ---VLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred ---eccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 1112445667899999999999999999999999999864
No 16
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-40 Score=369.60 Aligned_cols=271 Identities=25% Similarity=0.432 Sum_probs=214.4
Q ss_pred CCHHHHHHHhCCcceeeeeeecCcEEEEEEEeeCCCEEEEEEeecc--cchhhHHHHHHHHHHhhcccccceeEEeeeee
Q 003605 399 FSASEIEKATGNFDASRILGEGGFGLVYSGVLDDGTKVAVKVLKRV--DQQGGREFLAEVEMLSRLHHRNLVKLIGICIE 476 (808)
Q Consensus 399 fs~~el~~at~~f~~~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~--~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~ 476 (808)
.+.++++.-.+.+.+.+.||+|.||+||+|.+.. .||||+|+.. ..+..+.|.+|+..|++-+|.||+-|.|||..
T Consensus 382 ~s~~~WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~ 459 (678)
T KOG0193|consen 382 DSLEEWEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMN 459 (678)
T ss_pred ccccccccCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcC
Confidence 3446666667777788999999999999999862 6999999853 34567899999999999999999999999998
Q ss_pred ccceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccc
Q 003605 477 EQARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDF 556 (808)
Q Consensus 477 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DF 556 (808)
... .+|+.+|++.+|+.|||..+ ..++..+.++||.|||+||.|||.++ |||||||..||||+++++|||+||
T Consensus 460 p~~-AIiTqwCeGsSLY~hlHv~e---tkfdm~~~idIAqQiaqGM~YLHAK~---IIHrDLKSnNIFl~~~~kVkIgDF 532 (678)
T KOG0193|consen 460 PPL-AIITQWCEGSSLYTHLHVQE---TKFDMNTTIDIAQQIAQGMDYLHAKN---IIHRDLKSNNIFLHEDLKVKIGDF 532 (678)
T ss_pred Cce-eeeehhccCchhhhhccchh---hhhhHHHHHHHHHHHHHhhhhhhhhh---hhhhhccccceEEccCCcEEEecc
Confidence 766 99999999999999999543 46889999999999999999999998 999999999999999999999999
Q ss_pred ccccccccccccccccccccccccccchhhhc---CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhc
Q 003605 557 GLARSAMDEESRHISTRVMGTFGYVAPEYAMT---GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLL 633 (808)
Q Consensus 557 GLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~---~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~ 633 (808)
||+..-..-.........-|...|||||+++. ..|+..|||||||+|+|||+||..||.... . +..-|+ +
T Consensus 533 GLatvk~~w~g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~-~---dqIifm---V 605 (678)
T KOG0193|consen 533 GLATVKTRWSGEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQN-R---DQIIFM---V 605 (678)
T ss_pred cceeeeeeeccccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCC-h---hheEEE---e
Confidence 99853222111112223346788999999974 468999999999999999999999997211 1 111111 0
Q ss_pred ccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHhh
Q 003605 634 TSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLVCNEC 691 (808)
Q Consensus 634 ~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~~~~ 691 (808)
..+....+.. ....++..+|.+|+..||..++++||.+.+|+..|+++....
T Consensus 606 GrG~l~pd~s------~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~~ 657 (678)
T KOG0193|consen 606 GRGYLMPDLS------KIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPSL 657 (678)
T ss_pred cccccCccch------hhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhcc
Confidence 1111011111 122356678999999999999999999999999998887654
No 17
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=1.5e-39 Score=350.35 Aligned_cols=264 Identities=26% Similarity=0.455 Sum_probs=205.4
Q ss_pred CCcceeeeeeecCcEEEEEEEeeC-----------------CCEEEEEEeecc-cchhhHHHHHHHHHHhhcccccceeE
Q 003605 409 GNFDASRILGEGGFGLVYSGVLDD-----------------GTKVAVKVLKRV-DQQGGREFLAEVEMLSRLHHRNLVKL 470 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~d-----------------g~~VAVK~lk~~-~~~~~~~f~~Ei~iL~~L~HpNIV~L 470 (808)
++|.+.+.||+|+||.||++.+++ +..||+|.++.. ......+|.+|++++.+++|+||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 578889999999999999998542 336999998753 23345689999999999999999999
Q ss_pred EeeeeeccceEEEEeecCCCCcccccccccc---------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEe
Q 003605 471 IGICIEEQARCLVYELIPNGSVESHLHGVDK---------------ESAPLGWDARLKIALGAARALAYLHEDSSPRVIH 535 (808)
Q Consensus 471 ~g~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~---------------~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiH 535 (808)
++++.+.+..++||||+++|+|.+++..... ....++|.++++|+.|++.||+|||+.+ |+|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---ivH 161 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLN---FVH 161 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCC---ccc
Confidence 9999999999999999999999998854211 1135789999999999999999999988 999
Q ss_pred eeecccCeeecCCCcceecccccccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh--CCCC
Q 003605 536 RDFKSSNILLEHDFTPKVSDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS--GRKP 613 (808)
Q Consensus 536 rDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT--G~~P 613 (808)
|||||+|||++.++.+||+|||+++...............++..|+|||++..+.++.++|||||||++|||++ +..|
T Consensus 162 ~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p 241 (304)
T cd05096 162 RDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQP 241 (304)
T ss_pred cCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCCC
Confidence 99999999999999999999999986544333233334456789999999998999999999999999999987 4566
Q ss_pred CCCCCCCCcchhHHhhhhhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 003605 614 VDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALK 685 (808)
Q Consensus 614 ~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le 685 (808)
|..... .....++......... .. ....+......+.+|+.+||+.+|++||++.||++.|+
T Consensus 242 ~~~~~~---~~~~~~~~~~~~~~~~--~~-----~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 242 YGELTD---EQVIENAGEFFRDQGR--QV-----YLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred CCcCCH---HHHHHHHHHHhhhccc--cc-----cccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 653321 2222222211111000 00 00112234467899999999999999999999998886
No 18
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-40 Score=352.21 Aligned_cols=243 Identities=26% Similarity=0.389 Sum_probs=202.6
Q ss_pred hCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc---cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEE
Q 003605 408 TGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV---DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLV 483 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~---~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV 483 (808)
-++|++.++||+|+||+||.++.. +++.+|+|++++. .....+...+|..+|.+++||.||+++..|++.+.+|||
T Consensus 24 ~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLylV 103 (357)
T KOG0598|consen 24 PDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYLV 103 (357)
T ss_pred hhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEEE
Confidence 467999999999999999999854 6899999999752 334567788999999999999999999999999999999
Q ss_pred EeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccc
Q 003605 484 YELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAM 563 (808)
Q Consensus 484 ~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~ 563 (808)
+||+.||.|..+|. +...+++..+.-++.+|+.||.|||+.+ ||||||||+|||||++|+++|+|||||+...
T Consensus 104 ld~~~GGeLf~hL~----~eg~F~E~~arfYlaEi~lAL~~LH~~g---IiyRDlKPENILLd~~GHi~LtDFgL~k~~~ 176 (357)
T KOG0598|consen 104 LDYLNGGELFYHLQ----REGRFSEDRARFYLAEIVLALGYLHSKG---IIYRDLKPENILLDEQGHIKLTDFGLCKEDL 176 (357)
T ss_pred EeccCCccHHHHHH----hcCCcchhHHHHHHHHHHHHHHHHHhCC---eeeccCCHHHeeecCCCcEEEeccccchhcc
Confidence 99999999999995 3345888888888999999999999999 9999999999999999999999999998544
Q ss_pred cccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccccccccccc
Q 003605 564 DEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERII 643 (808)
Q Consensus 564 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~iv 643 (808)
... ..+...+||+.|||||++.+..|+..+|.||+|+++|||++|..||... +...+...+...+
T Consensus 177 ~~~--~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~------~~~~~~~~I~~~k------- 241 (357)
T KOG0598|consen 177 KDG--DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAE------DVKKMYDKILKGK------- 241 (357)
T ss_pred cCC--CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCc------cHHHHHHHHhcCc-------
Confidence 322 2334478999999999999999999999999999999999999999643 2333333332221
Q ss_pred CCCCCCCCChhhHHHHHHHHHHccccCCCCCCC
Q 003605 644 DPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPF 676 (808)
Q Consensus 644 D~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs 676 (808)
+ ...+.-...+..+++...|..||++|..
T Consensus 242 ---~-~~~p~~ls~~ardll~~LL~rdp~~RLg 270 (357)
T KOG0598|consen 242 ---L-PLPPGYLSEEARDLLKKLLKRDPRQRLG 270 (357)
T ss_pred ---C-CCCCccCCHHHHHHHHHHhccCHHHhcC
Confidence 0 1122223467889999999999999963
No 19
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.9e-40 Score=371.76 Aligned_cols=268 Identities=28% Similarity=0.461 Sum_probs=218.3
Q ss_pred HHHHHHHhCCcceeeeeeecCcEEEEEEEeeC--C--CE-EEEEEeec---ccchhhHHHHHHHHHHhhcccccceeEEe
Q 003605 401 ASEIEKATGNFDASRILGEGGFGLVYSGVLDD--G--TK-VAVKVLKR---VDQQGGREFLAEVEMLSRLHHRNLVKLIG 472 (808)
Q Consensus 401 ~~el~~at~~f~~~~~LG~G~fG~VYkg~l~d--g--~~-VAVK~lk~---~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g 472 (808)
...++-..++....++||+|+||.||+|.+.. + .. ||||..+. .......+|++|+++|+.++|+|||+|+|
T Consensus 149 r~~Wel~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yG 228 (474)
T KOG0194|consen 149 RQKWELSHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYG 228 (474)
T ss_pred ccccEEeccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEE
Confidence 34455556677777999999999999999763 2 23 89999984 45677789999999999999999999999
Q ss_pred eeeeccceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcce
Q 003605 473 ICIEEQARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPK 552 (808)
Q Consensus 473 ~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vK 552 (808)
++..+..+++|||+|.||+|++||+... ..++..++++++.++|+||+|||.++ +|||||.++|+|++.++.+|
T Consensus 229 Va~~~~Pl~ivmEl~~gGsL~~~L~k~~---~~v~~~ek~~~~~~AA~Gl~YLh~k~---~IHRDIAARNcL~~~~~~vK 302 (474)
T KOG0194|consen 229 VAVLEEPLMLVMELCNGGSLDDYLKKNK---KSLPTLEKLRFCYDAARGLEYLHSKN---CIHRDIAARNCLYSKKGVVK 302 (474)
T ss_pred EEcCCCccEEEEEecCCCcHHHHHHhCC---CCCCHHHHHHHHHHHHhHHHHHHHCC---CcchhHhHHHheecCCCeEE
Confidence 9999999999999999999999997432 36999999999999999999999998 99999999999999999999
Q ss_pred ecccccccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhh
Q 003605 553 VSDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARP 631 (808)
Q Consensus 553 L~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~ 631 (808)
|+||||++.... .......-.-...|+|||.+..+.|+.++|||||||++||+++ |..||...... .+.
T Consensus 303 ISDFGLs~~~~~--~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~---~v~----- 372 (474)
T KOG0194|consen 303 ISDFGLSRAGSQ--YVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY---EVK----- 372 (474)
T ss_pred eCccccccCCcc--eeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH---HHH-----
Confidence 999999875421 1111111235679999999999999999999999999999999 88898643221 111
Q ss_pred hcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHhhh
Q 003605 632 LLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLVCNECD 692 (808)
Q Consensus 632 ~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~~~~~ 692 (808)
..++........+......+..++.+|+..+|++||+|.+|.+.|+.+.....
T Consensus 373 --------~kI~~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~ 425 (474)
T KOG0194|consen 373 --------AKIVKNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE 425 (474)
T ss_pred --------HHHHhcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence 11222233334455667788999999999999999999999999998876654
No 20
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.1e-39 Score=364.05 Aligned_cols=261 Identities=25% Similarity=0.409 Sum_probs=205.7
Q ss_pred hCCcceeeeeeecCcEEEEEEEe------eCCCEEEEEEeecc-cchhhHHHHHHHHHHhhc-ccccceeEEeeeeeccc
Q 003605 408 TGNFDASRILGEGGFGLVYSGVL------DDGTKVAVKVLKRV-DQQGGREFLAEVEMLSRL-HHRNLVKLIGICIEEQA 479 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l------~dg~~VAVK~lk~~-~~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~~~~~~~ 479 (808)
.++|++.+.||+|+||.||+|+. +++..||||+++.. .....+.+.+|++++..+ +|+||++++++|.+.+.
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~ 113 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP 113 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence 34688889999999999999973 24568999999743 233456789999999999 89999999999999999
Q ss_pred eEEEEeecCCCCcccccccccc----------------------------------------------------------
Q 003605 480 RCLVYELIPNGSVESHLHGVDK---------------------------------------------------------- 501 (808)
Q Consensus 480 ~~LV~Ey~~~GsL~~~L~~~~~---------------------------------------------------------- 501 (808)
.++||||+++|+|.++++....
T Consensus 114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (375)
T cd05104 114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS 193 (375)
T ss_pred ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence 9999999999999999864221
Q ss_pred -------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccccc
Q 003605 502 -------------ESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESR 568 (808)
Q Consensus 502 -------------~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~ 568 (808)
....++|..+++|+.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++........
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~ 270 (375)
T cd05104 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKN---CIHRDLAARNILLTHGRITKICDFGLARDIRNDSNY 270 (375)
T ss_pred ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCchhhEEEECCCcEEEecCccceeccCcccc
Confidence 1125889999999999999999999988 999999999999999999999999999865433222
Q ss_pred ccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCC
Q 003605 569 HISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSL 647 (808)
Q Consensus 569 ~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l 647 (808)
.......++..|+|||++.+..++.++|||||||++|||++ |..||..... ......+... ..
T Consensus 271 ~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~--~~~~~~~~~~--------------~~ 334 (375)
T cd05104 271 VVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPV--DSKFYKMIKE--------------GY 334 (375)
T ss_pred cccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCc--hHHHHHHHHh--------------Cc
Confidence 22223345678999999999999999999999999999998 8888864321 1122222111 00
Q ss_pred CCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 003605 648 GNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLV 687 (808)
Q Consensus 648 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i 687 (808)
....+.....++.+|+.+||+.||++||++.||++.|++.
T Consensus 335 ~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 335 RMLSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred cCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 0111112245789999999999999999999999999853
No 21
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.8e-39 Score=362.33 Aligned_cols=262 Identities=27% Similarity=0.441 Sum_probs=206.1
Q ss_pred hCCcceeeeeeecCcEEEEEEEee------CCCEEEEEEeeccc-chhhHHHHHHHHHHhhc-ccccceeEEeeeeeccc
Q 003605 408 TGNFDASRILGEGGFGLVYSGVLD------DGTKVAVKVLKRVD-QQGGREFLAEVEMLSRL-HHRNLVKLIGICIEEQA 479 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l~------dg~~VAVK~lk~~~-~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~~~~~~~ 479 (808)
.++|++.+.||+|+||.||+|+.. ++..||||+++... ....+.+.+|+++++.+ +|+||++++++|...+.
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~ 116 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGP 116 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCC
Confidence 357888999999999999998742 34579999997532 33356788999999999 89999999999999999
Q ss_pred eEEEEeecCCCCcccccccccc----------------------------------------------------------
Q 003605 480 RCLVYELIPNGSVESHLHGVDK---------------------------------------------------------- 501 (808)
Q Consensus 480 ~~LV~Ey~~~GsL~~~L~~~~~---------------------------------------------------------- 501 (808)
.++||||+++|+|.++++....
T Consensus 117 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (374)
T cd05106 117 VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSD 196 (374)
T ss_pred eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccc
Confidence 9999999999999998853210
Q ss_pred --------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccccccccc
Q 003605 502 --------ESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRHISTR 573 (808)
Q Consensus 502 --------~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~~~~~ 573 (808)
....++|.++++|+.|+++||+|||+.+ |+||||||+|||+++++.+||+|||+++.............
T Consensus 197 ~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~g---iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~ 273 (374)
T cd05106 197 SKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKN---CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGN 273 (374)
T ss_pred ccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCC---EEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccC
Confidence 1135889999999999999999999988 99999999999999999999999999976543222222223
Q ss_pred cccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCCCCC
Q 003605 574 VMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGNDVP 652 (808)
Q Consensus 574 ~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~~~~ 652 (808)
..++..|+|||++.+..++.++|||||||++|||++ |+.||...... ..+.. .+........+
T Consensus 274 ~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~--~~~~~--------------~~~~~~~~~~~ 337 (374)
T cd05106 274 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVN--SKFYK--------------MVKRGYQMSRP 337 (374)
T ss_pred CCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCcccccc--HHHHH--------------HHHcccCccCC
Confidence 345678999999999999999999999999999997 99998643221 11111 00111111111
Q ss_pred hhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHH
Q 003605 653 FDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLVC 688 (808)
Q Consensus 653 ~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~ 688 (808)
.....++.+++.+||+.+|++||++.+|++.|+++.
T Consensus 338 ~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 338 DFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred CCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 223467899999999999999999999999999864
No 22
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=2.7e-39 Score=341.49 Aligned_cols=251 Identities=34% Similarity=0.586 Sum_probs=196.1
Q ss_pred ceeeeeeecCcEEEEEEEee-----CCCEEEEEEeecc-cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEe
Q 003605 412 DASRILGEGGFGLVYSGVLD-----DGTKVAVKVLKRV-DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYE 485 (808)
Q Consensus 412 ~~~~~LG~G~fG~VYkg~l~-----dg~~VAVK~lk~~-~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~E 485 (808)
++.+.||.|.||.||+|.+. .+..|+||.++.. .....++|.+|++++++++|+||++++|+|...+..++|+|
T Consensus 2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e 81 (259)
T PF07714_consen 2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVME 81 (259)
T ss_dssp EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE
T ss_pred EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeeccccccccccccccccccccccccccccccc
Confidence 35689999999999999987 3567999999753 33457899999999999999999999999998888999999
Q ss_pred ecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccc
Q 003605 486 LIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDE 565 (808)
Q Consensus 486 y~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~ 565 (808)
|+++|+|.++|+.. ....++|.++++|+.|+++||+|||+.+ ++|+||+++|||+++++.+||+|||+++.....
T Consensus 82 ~~~~g~L~~~L~~~--~~~~~~~~~~~~i~~~i~~~l~~Lh~~~---iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~ 156 (259)
T PF07714_consen 82 YCPGGSLDDYLKSK--NKEPLSEQQRLSIAIQIAEALSYLHSNN---IIHGNLSPSNILLDSNGQVKLSDFGLSRPISEK 156 (259)
T ss_dssp --TTEBHHHHHHHT--CTTTSBHHHHHHHHHHHHHHHHHHHHTT---EEEST-SGGGEEEETTTEEEEESTTTGEETTTS
T ss_pred cccccccccccccc--cccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccccc
Confidence 99999999999753 2356999999999999999999999988 999999999999999999999999999865322
Q ss_pred cccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhcccccccccccC
Q 003605 566 ESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLERIID 644 (808)
Q Consensus 566 ~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD 644 (808)
..............|+|||.+....++.++||||||+++|||++ |+.|+.... ..++... + .....
T Consensus 157 ~~~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~---~~~~~~~---~-~~~~~------ 223 (259)
T PF07714_consen 157 SKYKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYD---NEEIIEK---L-KQGQR------ 223 (259)
T ss_dssp SSEEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSC---HHHHHHH---H-HTTEE------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccc---ccccccc---c-ccccc------
Confidence 22222233456789999999999999999999999999999999 778875431 1111111 1 11110
Q ss_pred CCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 003605 645 PSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQAL 684 (808)
Q Consensus 645 ~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~L 684 (808)
...+......+.+++.+||+.+|++||++.+|++.|
T Consensus 224 ----~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 224 ----LPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp ----TTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred ----ceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 112223456789999999999999999999999876
No 23
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=4.1e-39 Score=341.95 Aligned_cols=258 Identities=30% Similarity=0.506 Sum_probs=208.2
Q ss_pred CCcceeeeeeecCcEEEEEEEeeC------CCEEEEEEeeccc-chhhHHHHHHHHHHhhcccccceeEEeeeeeccceE
Q 003605 409 GNFDASRILGEGGFGLVYSGVLDD------GTKVAVKVLKRVD-QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARC 481 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~d------g~~VAVK~lk~~~-~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~ 481 (808)
++|++.+.||+|+||.||+|.... ...||+|.++... .....+|.+|++++.+++|+||+++++++.+.+..+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 357778999999999999998642 2579999987432 334567999999999999999999999999989999
Q ss_pred EEEeecCCCCcccccccccc------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCC
Q 003605 482 LVYELIPNGSVESHLHGVDK------------ESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDF 549 (808)
Q Consensus 482 LV~Ey~~~GsL~~~L~~~~~------------~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~ 549 (808)
++|||+++|+|.+++..... ....+++.+++.++.|++.||+|||+.+ ++||||||+||++++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nil~~~~~ 161 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHH---FVHRDLAARNCLVGEGL 161 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccccceEEEcCCC
Confidence 99999999999999864321 1145889999999999999999999998 99999999999999999
Q ss_pred cceecccccccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHh
Q 003605 550 TPKVSDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAW 628 (808)
Q Consensus 550 ~vKL~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w 628 (808)
.+||+|||+++.....+.........++..|+|||++.+..++.++|||||||++|||++ |..||..... ..+..+
T Consensus 162 ~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~---~~~~~~ 238 (283)
T cd05048 162 TVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSN---QEVIEM 238 (283)
T ss_pred cEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCH---HHHHHH
Confidence 999999999986543333233334456789999999998999999999999999999998 9999864322 122221
Q ss_pred hhhhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 003605 629 ARPLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKL 686 (808)
Q Consensus 629 ~~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~ 686 (808)
.. .......+.....++.+|+.+||+.+|++||++.||++.|+.
T Consensus 239 i~--------------~~~~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 239 IR--------------SRQLLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred HH--------------cCCcCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 11 111112234456789999999999999999999999999974
No 24
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=4.1e-40 Score=362.76 Aligned_cols=239 Identities=28% Similarity=0.505 Sum_probs=201.9
Q ss_pred eeeeeeecCcEEEEEEEeeCCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecCCCCc
Q 003605 413 ASRILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIPNGSV 492 (808)
Q Consensus 413 ~~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~~GsL 492 (808)
.++.||.|+.|.||+|++. ++.||||+++... ..+|+.|++|+|+||+.|.|+|.....+|+|||||..|-|
T Consensus 128 ELeWlGSGaQGAVF~Grl~-netVAVKKV~elk-------ETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfCa~GqL 199 (904)
T KOG4721|consen 128 ELEWLGSGAQGAVFLGRLH-NETVAVKKVRELK-------ETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFCAQGQL 199 (904)
T ss_pred hhhhhccCcccceeeeecc-CceehhHHHhhhh-------hhhHHHHHhccCcceeeEeeeecCCceeEEeeeccccccH
Confidence 3578999999999999997 7899999987432 2578899999999999999999999999999999999999
Q ss_pred cccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccccccccc
Q 003605 493 ESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRHIST 572 (808)
Q Consensus 493 ~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~~~~ 572 (808)
++.|+ .+..+.-.....|..+||.||.|||.+. |||||||.-||||..+..+||+|||-++...+. . ..-
T Consensus 200 ~~VLk----a~~~itp~llv~Wsk~IA~GM~YLH~hK---IIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~-S--TkM 269 (904)
T KOG4721|consen 200 YEVLK----AGRPITPSLLVDWSKGIAGGMNYLHLHK---IIHRDLKSPNILISYDDVVKISDFGTSKELSDK-S--TKM 269 (904)
T ss_pred HHHHh----ccCccCHHHHHHHHHHhhhhhHHHHHhh---HhhhccCCCceEeeccceEEeccccchHhhhhh-h--hhh
Confidence 99995 3456888889999999999999999998 999999999999999999999999999865433 1 122
Q ss_pred ccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCCCCC
Q 003605 573 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGNDVP 652 (808)
Q Consensus 573 ~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~~~~ 652 (808)
...||..|||||++.+...++|.|||||||||||||||..||..-+.. .+-|- +-...|.-..+
T Consensus 270 SFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdss----AIIwG------------VGsNsL~LpvP 333 (904)
T KOG4721|consen 270 SFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSS----AIIWG------------VGSNSLHLPVP 333 (904)
T ss_pred hhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchh----eeEEe------------ccCCcccccCc
Confidence 467999999999999999999999999999999999999999643211 11111 11112233456
Q ss_pred hhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 003605 653 FDSVAKVAAIASMCVQPEVQHRPFMGEVVQALK 685 (808)
Q Consensus 653 ~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le 685 (808)
..+..-|.-|+++||+..|..||++++|+..|+
T Consensus 334 stcP~GfklL~Kqcw~sKpRNRPSFrqil~Hld 366 (904)
T KOG4721|consen 334 STCPDGFKLLLKQCWNSKPRNRPSFRQILLHLD 366 (904)
T ss_pred ccCchHHHHHHHHHHhcCCCCCccHHHHHHHHh
Confidence 677788999999999999999999999999885
No 25
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=9.4e-39 Score=346.67 Aligned_cols=259 Identities=25% Similarity=0.427 Sum_probs=205.3
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCC----EEEEEEeecc-cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEE
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGT----KVAVKVLKRV-DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCL 482 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~----~VAVK~lk~~-~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~L 482 (808)
.+|+..+.||+|+||.||+|++. +++ .||||.++.. .....++|.+|+.+++.++|+||++++|+|... ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 46889999999999999999864 344 3899998753 334567899999999999999999999999864 5689
Q ss_pred EEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccc
Q 003605 483 VYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSA 562 (808)
Q Consensus 483 V~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~ 562 (808)
|+||+++|+|.++++.. ...+++..+++++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++..
T Consensus 86 v~e~~~~g~l~~~l~~~---~~~~~~~~~~~~~~qi~~~L~~LH~~~---iiH~dlkp~Nill~~~~~~kl~DfG~a~~~ 159 (316)
T cd05108 86 ITQLMPFGCLLDYVREH---KDNIGSQYLLNWCVQIAKGMNYLEERR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (316)
T ss_pred eeecCCCCCHHHHHHhc---cccCCHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEecCCCcEEEccccccccc
Confidence 99999999999999642 345889999999999999999999988 999999999999999999999999999865
Q ss_pred ccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhccccccccc
Q 003605 563 MDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLER 641 (808)
Q Consensus 563 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ 641 (808)
.............++..|+|||++.+..++.++|||||||++|||++ |+.||+.... ..+..+. ...
T Consensus 160 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~---~~~~~~~----~~~----- 227 (316)
T cd05108 160 GADEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA---SEISSIL----EKG----- 227 (316)
T ss_pred cCCCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH---HHHHHHH----hCC-----
Confidence 43222221222334678999999999999999999999999999998 9999864321 1111111 100
Q ss_pred ccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHhh
Q 003605 642 IIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLVCNEC 691 (808)
Q Consensus 642 ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~~~~ 691 (808)
.....+..+...+.+++.+||+.+|++||++.+++..|..+..+.
T Consensus 228 -----~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~~ 272 (316)
T cd05108 228 -----ERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARDP 272 (316)
T ss_pred -----CCCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcCC
Confidence 001112233457889999999999999999999999998876543
No 26
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=1.1e-38 Score=337.09 Aligned_cols=255 Identities=25% Similarity=0.383 Sum_probs=204.4
Q ss_pred CCcceeeeeeecCcEEEEEEEee----CCCEEEEEEeeccc-chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEE
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD----DGTKVAVKVLKRVD-QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLV 483 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~----dg~~VAVK~lk~~~-~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV 483 (808)
++|++.++||+|+||.||+|.+. .+..||+|.++... ....+.|.+|+.++.+++|+||++++|++...+..++|
T Consensus 5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 84 (266)
T cd05064 5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMIV 84 (266)
T ss_pred HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEEE
Confidence 56888999999999999999864 35689999998542 33456799999999999999999999999999999999
Q ss_pred EeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccc
Q 003605 484 YELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAM 563 (808)
Q Consensus 484 ~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~ 563 (808)
|||+++|+|.+++... ...++|.+++.++.|++.||+|||+.+ ++||||||+|||++.++.+|++|||.+....
T Consensus 85 ~e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~~i~~al~~lH~~~---iiH~dikp~nili~~~~~~~l~dfg~~~~~~ 158 (266)
T cd05064 85 TEYMSNGALDSFLRKH---EGQLVAGQLMGMLPGLASGMKYLSEMG---YVHKGLAAHKVLVNSDLVCKISGFRRLQEDK 158 (266)
T ss_pred EEeCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeeccccHhhEEEcCCCcEEECCCccccccc
Confidence 9999999999999632 246899999999999999999999988 9999999999999999999999999876432
Q ss_pred cccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhcccccccccc
Q 003605 564 DEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLERI 642 (808)
Q Consensus 564 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~i 642 (808)
.... .......++..|+|||++.+..++.++|||||||++|||++ |+.||..... ..+.....
T Consensus 159 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~---~~~~~~~~------------ 222 (266)
T cd05064 159 SEAI-YTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSG---QDVIKAVE------------ 222 (266)
T ss_pred ccch-hcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCH---HHHHHHHH------------
Confidence 2111 11112335678999999999999999999999999999875 9999964321 11111110
Q ss_pred cCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 003605 643 IDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLV 687 (808)
Q Consensus 643 vD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i 687 (808)
+ ......+......+.+++.+||+.+|++||++.||++.|+.+
T Consensus 223 -~-~~~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 223 -D-GFRLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred -C-CCCCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 0 001112234456789999999999999999999999998764
No 27
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1.8e-38 Score=339.49 Aligned_cols=252 Identities=24% Similarity=0.357 Sum_probs=201.9
Q ss_pred CcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc---chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEe
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD---QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYE 485 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~---~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~E 485 (808)
.|+..+.||+|+||+||++... +|+.||||.+.... ......+.+|++++.+++|+||+++++++.+.+..++|||
T Consensus 1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05631 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEE
Confidence 3778899999999999999864 78999999986432 2334568899999999999999999999999999999999
Q ss_pred ecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccc
Q 003605 486 LIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDE 565 (808)
Q Consensus 486 y~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~ 565 (808)
|+++|+|.+++... ....+++..++.++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||++......
T Consensus 81 ~~~~g~L~~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~ 155 (285)
T cd05631 81 IMNGGDLKFHIYNM--GNPGFDEQRAIFYAAELCCGLEDLQRER---IVYRDLKPENILLDDRGHIRISDLGLAVQIPEG 155 (285)
T ss_pred ecCCCcHHHHHHhh--CCCCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCC
Confidence 99999999887532 2235899999999999999999999988 999999999999999999999999999764322
Q ss_pred cccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCC
Q 003605 566 ESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDP 645 (808)
Q Consensus 566 ~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~ 645 (808)
. ......||..|+|||++.+..++.++|||||||+||||++|+.||.......... ..... +.+
T Consensus 156 ~---~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~--~~~~~----------~~~- 219 (285)
T cd05631 156 E---TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVKRE--EVDRR----------VKE- 219 (285)
T ss_pred C---eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchhHH--HHHHH----------hhc-
Confidence 1 1233468999999999999999999999999999999999999997543211110 00000 000
Q ss_pred CCCCCCChhhHHHHHHHHHHccccCCCCCCC-----HHHHHHH
Q 003605 646 SLGNDVPFDSVAKVAAIASMCVQPEVQHRPF-----MGEVVQA 683 (808)
Q Consensus 646 ~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs-----m~eVl~~ 683 (808)
....++......+.+|+.+||+.||++||+ ++|+++.
T Consensus 220 -~~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~h 261 (285)
T cd05631 220 -DQEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQH 261 (285)
T ss_pred -ccccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhcC
Confidence 011123334567899999999999999997 7887764
No 28
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-39 Score=349.64 Aligned_cols=257 Identities=26% Similarity=0.397 Sum_probs=204.4
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeecc--ceEEEEe
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQ--ARCLVYE 485 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~--~~~LV~E 485 (808)
.++...+.||+|+||+||++... +|+.+|||.+...+....+.+.+|+.+|.+++|+|||+++|...... .+++.||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 34566789999999999999976 48999999987654333677899999999999999999999855544 5899999
Q ss_pred ecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecC-CCcceeccccccccccc
Q 003605 486 LIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEH-DFTPKVSDFGLARSAMD 564 (808)
Q Consensus 486 y~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~-~~~vKL~DFGLa~~~~~ 564 (808)
|+++|+|.+++.... . .|++..+.+++.||++||+|||+++ |||||||++||||+. ++.+||+|||+++....
T Consensus 97 y~~~GsL~~~~~~~g--~-~l~E~~v~~ytr~iL~GL~ylHs~g---~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~ 170 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYG--G-KLPEPLVRRYTRQILEGLAYLHSKG---IVHCDIKPANILLDPSNGDVKLADFGLAKKLES 170 (313)
T ss_pred ccCCCcHHHHHHHcC--C-CCCHHHHHHHHHHHHHHHHHHHhCC---EeccCcccceEEEeCCCCeEEeccCcccccccc
Confidence 999999999997432 2 6999999999999999999999998 999999999999999 79999999999986543
Q ss_pred -ccccccccccccccccccchhhhcCCC-ccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccc
Q 003605 565 -EESRHISTRVMGTFGYVAPEYAMTGHL-LVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERI 642 (808)
Q Consensus 565 -~~~~~~~~~~~Gt~~Y~APE~l~~~~~-s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~i 642 (808)
...........||+.|||||++..+.. ..++|||||||+++||+||+.||... .....+.-.....
T Consensus 171 ~~~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~-----~~~~~~~~~ig~~------- 238 (313)
T KOG0198|consen 171 KGTKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEF-----FEEAEALLLIGRE------- 238 (313)
T ss_pred ccccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhh-----cchHHHHHHHhcc-------
Confidence 111122334779999999999986543 35999999999999999999999643 1111111111111
Q ss_pred cCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 003605 643 IDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKL 686 (808)
Q Consensus 643 vD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~ 686 (808)
.....++.....+..+++.+|+..+|++|||+.++++....
T Consensus 239 ---~~~P~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf~ 279 (313)
T KOG0198|consen 239 ---DSLPEIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPFL 279 (313)
T ss_pred ---CCCCCCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChhh
Confidence 11123444556788999999999999999999999887654
No 29
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=1.6e-38 Score=339.39 Aligned_cols=263 Identities=25% Similarity=0.425 Sum_probs=209.9
Q ss_pred HHhCCcceeeeeeecCcEEEEEEEee------CCCEEEEEEeecc-cchhhHHHHHHHHHHhhc-ccccceeEEeeeeec
Q 003605 406 KATGNFDASRILGEGGFGLVYSGVLD------DGTKVAVKVLKRV-DQQGGREFLAEVEMLSRL-HHRNLVKLIGICIEE 477 (808)
Q Consensus 406 ~at~~f~~~~~LG~G~fG~VYkg~l~------dg~~VAVK~lk~~-~~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~~~~~ 477 (808)
...++|+..+.||+|+||.||++... +...+|+|+++.. ......++.+|++++.++ +|+||+++++++..+
T Consensus 9 ~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~ 88 (293)
T cd05053 9 LPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQE 88 (293)
T ss_pred cCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCC
Confidence 34567889999999999999999864 2357999998753 334456789999999999 799999999999999
Q ss_pred cceEEEEeecCCCCccccccccc------------cCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeee
Q 003605 478 QARCLVYELIPNGSVESHLHGVD------------KESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILL 545 (808)
Q Consensus 478 ~~~~LV~Ey~~~GsL~~~L~~~~------------~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILL 545 (808)
+..+++|||+++|+|.++++... .....++|..+++++.|++.||+|||+.+ |+||||||+|||+
T Consensus 89 ~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivH~dlkp~Nil~ 165 (293)
T cd05053 89 GPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKK---CIHRDLAARNVLV 165 (293)
T ss_pred CCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---ccccccceeeEEE
Confidence 99999999999999999986421 22346899999999999999999999987 9999999999999
Q ss_pred cCCCcceecccccccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcch
Q 003605 546 EHDFTPKVSDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQEN 624 (808)
Q Consensus 546 d~~~~vKL~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~ 624 (808)
++++.+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||..... ..
T Consensus 166 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~---~~ 242 (293)
T cd05053 166 TEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPV---EE 242 (293)
T ss_pred cCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCH---HH
Confidence 9999999999999986543322222223345678999999998899999999999999999998 8888853221 11
Q ss_pred hHHhhhhhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHH
Q 003605 625 LVAWARPLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLVC 688 (808)
Q Consensus 625 lv~w~~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~ 688 (808)
+... +........+......+.+++.+|++.+|++||++.||++.|+.+.
T Consensus 243 ~~~~--------------~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 243 LFKL--------------LKEGYRMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred HHHH--------------HHcCCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 1111 1111111223344568999999999999999999999999999764
No 30
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=9.4e-39 Score=338.23 Aligned_cols=257 Identities=27% Similarity=0.460 Sum_probs=208.0
Q ss_pred CCcceeeeeeecCcEEEEEEEeeC------CCEEEEEEeecccch-hhHHHHHHHHHHhhcccccceeEEeeeeeccceE
Q 003605 409 GNFDASRILGEGGFGLVYSGVLDD------GTKVAVKVLKRVDQQ-GGREFLAEVEMLSRLHHRNLVKLIGICIEEQARC 481 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~d------g~~VAVK~lk~~~~~-~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~ 481 (808)
++|.+.+.||+|+||.||+|...+ ++.||||.++..... ..++|.+|++++++++|+||+++++++...+..+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 457788999999999999998643 478999999865443 4678999999999999999999999999999999
Q ss_pred EEEeecCCCCccccccccc----------cCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcc
Q 003605 482 LVYELIPNGSVESHLHGVD----------KESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTP 551 (808)
Q Consensus 482 LV~Ey~~~GsL~~~L~~~~----------~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~v 551 (808)
+||||+++|+|.++++... .....+++.+++.++.|++.||+|||+.+ ++||||||+||+++.++.+
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~ 161 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQH---FVHRDLATRNCLVGYDLVV 161 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCC---eeccccccceEEEcCCCeE
Confidence 9999999999999997532 12345889999999999999999999988 9999999999999999999
Q ss_pred eecccccccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhh
Q 003605 552 KVSDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWAR 630 (808)
Q Consensus 552 KL~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~ 630 (808)
||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |+.||..... .....+..
T Consensus 162 kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~---~~~~~~~~ 238 (280)
T cd05049 162 KIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSN---EEVIECIT 238 (280)
T ss_pred EECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCH---HHHHHHHH
Confidence 9999999975433222222234456788999999999999999999999999999999 9999864321 22222211
Q ss_pred hhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 003605 631 PLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALK 685 (808)
Q Consensus 631 ~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le 685 (808)
. ......+......+.+++.+||+.+|++||++.||++.|+
T Consensus 239 ~--------------~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 239 Q--------------GRLLQRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred c--------------CCcCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 0 0001112234567899999999999999999999999886
No 31
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=2e-38 Score=339.54 Aligned_cols=262 Identities=27% Similarity=0.448 Sum_probs=211.5
Q ss_pred CCcceeeeeeecCcEEEEEEEee------CCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEE
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD------DGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCL 482 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~------dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~L 482 (808)
++|.+.+.||+|+||.||+|... ++..+++|.++.......+.|.+|++++++++|+||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 45788899999999999999743 345689999886655566789999999999999999999999999999999
Q ss_pred EEeecCCCCcccccccccc------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCc
Q 003605 483 VYELIPNGSVESHLHGVDK------------ESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFT 550 (808)
Q Consensus 483 V~Ey~~~GsL~~~L~~~~~------------~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~ 550 (808)
||||+++++|.++++.... ....++|..+++++.|++.||+|||+++ |+||||||+|||++.++.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil~~~~~~ 161 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQH---FVHRDLATRNCLVGANLL 161 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCc
Confidence 9999999999999964321 1235899999999999999999999998 999999999999999999
Q ss_pred ceecccccccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhh
Q 003605 551 PKVSDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWA 629 (808)
Q Consensus 551 vKL~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~ 629 (808)
++|+|||+++...............++..|+|||++.+..++.++|||||||++|||+| |+.||..... .......
T Consensus 162 ~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~---~~~~~~~ 238 (291)
T cd05094 162 VKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN---TEVIECI 238 (291)
T ss_pred EEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHH
Confidence 99999999976543332223334556788999999999999999999999999999999 9999864322 1111111
Q ss_pred hhhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHh
Q 003605 630 RPLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLVCNE 690 (808)
Q Consensus 630 ~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~~~ 690 (808)
. .... ...+......+.+++.+||+.+|++||++.+|+++|+++...
T Consensus 239 ----~---------~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 239 ----T---------QGRV-LERPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred ----h---------CCCC-CCCCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 0 0000 011122346789999999999999999999999999988654
No 32
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=2e-38 Score=338.94 Aligned_cols=262 Identities=27% Similarity=0.448 Sum_probs=210.6
Q ss_pred CCcceeeeeeecCcEEEEEEEee------CCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEE
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD------DGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCL 482 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~------dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~L 482 (808)
++|.+.+.||+|+||+||++... ++..+|+|.++.......+.+.+|++++.+++|+||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 84 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 56888999999999999999842 345689999987666667789999999999999999999999999999999
Q ss_pred EEeecCCCCccccccccc---------cCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCccee
Q 003605 483 VYELIPNGSVESHLHGVD---------KESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKV 553 (808)
Q Consensus 483 V~Ey~~~GsL~~~L~~~~---------~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL 553 (808)
||||+++++|.++++... .....++|.++++++.|++.||+|||+.+ ++||||||+|||+++++.+||
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~---i~H~dlkp~Nili~~~~~~kl 161 (288)
T cd05093 85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQH---FVHRDLATRNCLVGENLLVKI 161 (288)
T ss_pred EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccCcceEEEccCCcEEe
Confidence 999999999999986432 12235899999999999999999999988 999999999999999999999
Q ss_pred cccccccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhh
Q 003605 554 SDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPL 632 (808)
Q Consensus 554 ~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~ 632 (808)
+|||+++...............++..|+|||++.+..++.++|||||||++|||+| |..||..... .......
T Consensus 162 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~---~~~~~~i--- 235 (288)
T cd05093 162 GDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSN---NEVIECI--- 235 (288)
T ss_pred ccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHH---
Confidence 99999976533222222233445778999999998899999999999999999999 8988864321 1111111
Q ss_pred cccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHh
Q 003605 633 LTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLVCNE 690 (808)
Q Consensus 633 ~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~~~ 690 (808)
.. .. . ...+......+.+|+.+||+.+|.+||++.||++.|+.+...
T Consensus 236 ~~-~~-~---------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 236 TQ-GR-V---------LQRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred Hc-CC-c---------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 00 00 0 001122345789999999999999999999999999988754
No 33
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=2.7e-38 Score=333.05 Aligned_cols=256 Identities=26% Similarity=0.442 Sum_probs=207.0
Q ss_pred CCcceeeeeeecCcEEEEEEEee----CCCEEEEEEeecc-cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEE
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD----DGTKVAVKVLKRV-DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLV 483 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~----dg~~VAVK~lk~~-~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV 483 (808)
++|++.+.||+|+||+||+|.+. +...||||.++.. ......+|.+|+.++++++|+||+++++++.+.+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv 83 (266)
T cd05033 4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMII 83 (266)
T ss_pred HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEEE
Confidence 56888999999999999999874 2457999998753 334456899999999999999999999999999999999
Q ss_pred EeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccc
Q 003605 484 YELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAM 563 (808)
Q Consensus 484 ~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~ 563 (808)
|||+++++|.++++.. ...++|.++++++.|++.||+|||+.+ |+||||||+|||+++++.++|+|||+++...
T Consensus 84 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~ 157 (266)
T cd05033 84 TEYMENGSLDKFLREN---DGKFTVGQLVGMLRGIASGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRRLE 157 (266)
T ss_pred EEcCCCCCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCcceEEEcCCCCEEECccchhhccc
Confidence 9999999999999642 236899999999999999999999988 9999999999999999999999999998764
Q ss_pred cccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhcccccccccc
Q 003605 564 DEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLERI 642 (808)
Q Consensus 564 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~i 642 (808)
............++..|+|||.+.+..++.++||||||+++|||++ |..||.... ...+..+...
T Consensus 158 ~~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~---~~~~~~~~~~----------- 223 (266)
T cd05033 158 DSEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMS---NQDVIKAVED----------- 223 (266)
T ss_pred ccccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCC---HHHHHHHHHc-----------
Confidence 2222222222345678999999998899999999999999999998 999985322 1112121110
Q ss_pred cCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 003605 643 IDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLV 687 (808)
Q Consensus 643 vD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i 687 (808)
......+......+.+++.+|++.+|++||++.||++.|+++
T Consensus 224 ---~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 224 ---GYRLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred ---CCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 001111233456789999999999999999999999999875
No 34
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=1.9e-38 Score=333.34 Aligned_cols=256 Identities=29% Similarity=0.449 Sum_probs=207.3
Q ss_pred HhCCcceeeeeeecCcEEEEEEEeeCCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEee
Q 003605 407 ATGNFDASRILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 407 at~~f~~~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
..++|++.+.||+|+||.||+|...+++.||||.++... ...++|.+|++++++++|+||+++++++...+..++||||
T Consensus 4 ~~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 82 (261)
T cd05068 4 DRTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTEL 82 (261)
T ss_pred chhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeec
Confidence 356789999999999999999998878889999987532 3457899999999999999999999999999999999999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEE 566 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~ 566 (808)
+++++|.+++.... ...++|..+++++.+++.||+|||+.+ |+||||||+||++++++.+||+|||+++......
T Consensus 83 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~ 157 (261)
T cd05068 83 MKYGSLLEYLQGGA--GRALKLPQLIDMAAQVASGMAYLEAQN---YIHRDLAARNVLVGENNICKVADFGLARVIKEDI 157 (261)
T ss_pred ccCCcHHHHHhccC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCCcceEEEcCCCCEEECCcceEEEccCCc
Confidence 99999999996432 346899999999999999999999988 9999999999999999999999999998654221
Q ss_pred ccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhcccccccccccCC
Q 003605 567 SRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDP 645 (808)
Q Consensus 567 ~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~ 645 (808)
. ........+..|+|||++.+..++.++||||||+++|||+| |+.||..... ..+.... +.
T Consensus 158 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~---~~~~~~~--------------~~ 219 (261)
T cd05068 158 Y-EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTN---AEVLQQV--------------DQ 219 (261)
T ss_pred c-cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCH---HHHHHHH--------------Hc
Confidence 1 11111223457999999998899999999999999999999 9999864321 1111110 00
Q ss_pred CCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 003605 646 SLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKL 686 (808)
Q Consensus 646 ~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~ 686 (808)
......+......+.+++.+|++.+|++||++.++++.|++
T Consensus 220 ~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~ 260 (261)
T cd05068 220 GYRMPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLED 260 (261)
T ss_pred CCCCCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhc
Confidence 11111223345679999999999999999999999999985
No 35
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=1.1e-38 Score=338.30 Aligned_cols=259 Identities=27% Similarity=0.498 Sum_probs=205.9
Q ss_pred HhCCcceeeeeeecCcEEEEEEEee------CCCEEEEEEeeccc-chhhHHHHHHHHHHhhcccccceeEEeeeeeccc
Q 003605 407 ATGNFDASRILGEGGFGLVYSGVLD------DGTKVAVKVLKRVD-QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQA 479 (808)
Q Consensus 407 at~~f~~~~~LG~G~fG~VYkg~l~------dg~~VAVK~lk~~~-~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~ 479 (808)
.+++|++.+.||+|+||.||+|... +++.||||+++... .....+|.+|+.++++++|+||+++++++.+...
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 5678999999999999999999753 34679999986432 2345678999999999999999999999999899
Q ss_pred eEEEEeecCCCCccccccccccC------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCccee
Q 003605 480 RCLVYELIPNGSVESHLHGVDKE------SAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKV 553 (808)
Q Consensus 480 ~~LV~Ey~~~GsL~~~L~~~~~~------~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL 553 (808)
.++||||+++|+|.++++..... ...++|..++.++.|++.||+|||+.+ ++||||||+|||+++++.++|
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---~vH~dlkp~Nil~~~~~~~~l 160 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANK---FVHRDLAARNCMVAEDFTVKI 160 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCcchheEEEcCCCCEEE
Confidence 99999999999999998643211 234788999999999999999999987 999999999999999999999
Q ss_pred cccccccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhh
Q 003605 554 SDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPL 632 (808)
Q Consensus 554 ~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~ 632 (808)
+|||+++...............++..|+|||++.++.++.++|||||||++|||++ |..||..... .....+..
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~---~~~~~~~~-- 235 (277)
T cd05062 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN---EQVLRFVM-- 235 (277)
T ss_pred CCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH---HHHHHHHH--
Confidence 99999876543322222223345788999999999899999999999999999999 7888854321 11111110
Q ss_pred cccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 003605 633 LTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALK 685 (808)
Q Consensus 633 ~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le 685 (808)
+... ...+......+.+++.+|++.+|++||++.|+++.|+
T Consensus 236 -----------~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 236 -----------EGGL-LDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred -----------cCCc-CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 0000 1122234467899999999999999999999999886
No 36
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2.2e-38 Score=346.82 Aligned_cols=265 Identities=23% Similarity=0.333 Sum_probs=206.1
Q ss_pred hCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc-cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEe
Q 003605 408 TGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV-DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYE 485 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~-~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~E 485 (808)
.++|++.+.||+|+||.||+++.. ++..||+|.++.. .....+++.+|++++++++|+||+++++++..++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 478999999999999999999976 6888999998753 23445679999999999999999999999999999999999
Q ss_pred ecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccc
Q 003605 486 LIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDE 565 (808)
Q Consensus 486 y~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~ 565 (808)
|+++|+|.++++. ...+++..+..++.|++.||+|||+.+ .|+||||||+|||++.++.+||+|||+++.....
T Consensus 84 ~~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~--~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~ 157 (331)
T cd06649 84 HMDGGSLDQVLKE----AKRIPEEILGKVSIAVLRGLAYLREKH--QIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (331)
T ss_pred cCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHhhcC--CEEcCCCChhhEEEcCCCcEEEccCccccccccc
Confidence 9999999999853 235889999999999999999999753 3999999999999999999999999998755322
Q ss_pred cccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhh-hccccc-------
Q 003605 566 ESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARP-LLTSRE------- 637 (808)
Q Consensus 566 ~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~-~~~~~~------- 637 (808)
......|+..|+|||++.+..++.++|||||||++|||+||+.||...... .+...... .....+
T Consensus 158 ----~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 230 (331)
T cd06649 158 ----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAK---ELEAIFGRPVVDGEEGEPHSIS 230 (331)
T ss_pred ----ccccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHhcccccccccCCccccC
Confidence 123356899999999999999999999999999999999999999643321 11111000 000000
Q ss_pred -------------------------ccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 003605 638 -------------------------GLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALK 685 (808)
Q Consensus 638 -------------------------~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le 685 (808)
....++..............++.+++.+||+.||++||++.|+++..-
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h~~ 303 (331)
T cd06649 231 PRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNHTF 303 (331)
T ss_pred cccccccccccccccccccchhHHHHHHHHHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcChH
Confidence 000000000000001124467899999999999999999999987643
No 37
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=2.5e-38 Score=338.23 Aligned_cols=260 Identities=27% Similarity=0.434 Sum_probs=207.4
Q ss_pred CcceeeeeeecCcEEEEEEEee------CCCEEEEEEeeccc-chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEE
Q 003605 410 NFDASRILGEGGFGLVYSGVLD------DGTKVAVKVLKRVD-QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCL 482 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~------dg~~VAVK~lk~~~-~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~L 482 (808)
+|.+.+.||+|+||.||+|+.. ....+++|.++... ....+++.+|+.+++.++|+||+++++.|..++..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 4778899999999999999853 23578999887533 3345689999999999999999999999999999999
Q ss_pred EEeecCCCCcccccccccc--------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccC
Q 003605 483 VYELIPNGSVESHLHGVDK--------------------ESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSN 542 (808)
Q Consensus 483 V~Ey~~~GsL~~~L~~~~~--------------------~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsN 542 (808)
++||+.+|+|.+++..... ....++|.+++.++.|++.||+|||+.+ ++||||||+|
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---ivH~dikp~n 157 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMK---LVHRDLAARN 157 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCC---eehhhhhhhe
Confidence 9999999999999864221 1235889999999999999999999988 9999999999
Q ss_pred eeecCCCcceecccccccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCC
Q 003605 543 ILLEHDFTPKVSDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPG 621 (808)
Q Consensus 543 ILLd~~~~vKL~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~ 621 (808)
||+++++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||+| |..||.....
T Consensus 158 ill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~-- 235 (290)
T cd05045 158 VLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAP-- 235 (290)
T ss_pred EEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCH--
Confidence 9999999999999999976543322211223345678999999998899999999999999999999 9999864321
Q ss_pred cchhHHhhhhhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHH
Q 003605 622 QENLVAWARPLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLVCN 689 (808)
Q Consensus 622 ~~~lv~w~~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~~ 689 (808)
..+..+.. .......+......+.+++.+|++.+|++||+++|+++.|+++..
T Consensus 236 -~~~~~~~~--------------~~~~~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 236 -ERLFNLLK--------------TGYRMERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred -HHHHHHHh--------------CCCCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 12222211 111112223345678999999999999999999999999998764
No 38
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=8.1e-39 Score=335.28 Aligned_cols=257 Identities=30% Similarity=0.487 Sum_probs=212.3
Q ss_pred HHhCCcceeeeeeecCcEEEEEEEeeCCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEe
Q 003605 406 KATGNFDASRILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYE 485 (808)
Q Consensus 406 ~at~~f~~~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~E 485 (808)
+...+|...++||+|+||.||+|...+++.+|+|.++.......+++.+|+.+++.++|+||+++++++.+.+..++|||
T Consensus 3 ~~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 82 (261)
T cd05148 3 RPREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITE 82 (261)
T ss_pred CcHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEe
Confidence 34567888899999999999999988899999999987666566789999999999999999999999999999999999
Q ss_pred ecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccc
Q 003605 486 LIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDE 565 (808)
Q Consensus 486 y~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~ 565 (808)
|+++|+|.++++.. ....++|.+++.++.+++.||+|||+.+ |+||||||+|||+++++.+||+|||++......
T Consensus 83 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~ 157 (261)
T cd05148 83 LMEKGSLLAFLRSP--EGQVLPVASLIDMACQVAEGMAYLEEQN---SIHRDLAARNILVGEDLVCKVADFGLARLIKED 157 (261)
T ss_pred ecccCCHHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccCcceEEEcCCceEEEccccchhhcCCc
Confidence 99999999999743 2346899999999999999999999988 999999999999999999999999999765332
Q ss_pred cccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhcccccccccccC
Q 003605 566 ESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLERIID 644 (808)
Q Consensus 566 ~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD 644 (808)
. .......++..|++||.+.++.++.++||||||+++|||++ |+.||..... .....+..
T Consensus 158 ~--~~~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~---~~~~~~~~-------------- 218 (261)
T cd05148 158 V--YLSSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNN---HEVYDQIT-------------- 218 (261)
T ss_pred c--ccccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCH---HHHHHHHH--------------
Confidence 1 11123345678999999998899999999999999999998 8999864321 11222111
Q ss_pred CCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 003605 645 PSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKL 686 (808)
Q Consensus 645 ~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~ 686 (808)
.......+......+.+++.+|++.+|++||+++++++.|+.
T Consensus 219 ~~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~ 260 (261)
T cd05148 219 AGYRMPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDN 260 (261)
T ss_pred hCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhc
Confidence 111112233445678999999999999999999999999975
No 39
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=2.5e-38 Score=331.97 Aligned_cols=255 Identities=25% Similarity=0.413 Sum_probs=207.2
Q ss_pred hCCcceeeeeeecCcEEEEEEEeeCCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeec
Q 003605 408 TGNFDASRILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELI 487 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~ 487 (808)
.++|++.+.||+|+||.||+|...+++.||+|.++.. ....+.+.+|+.++++++|+||+++++++.+.+..+++|||+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPG-TMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM 83 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCC-chhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence 3578899999999999999999888889999998753 334578999999999999999999999999999999999999
Q ss_pred CCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccc
Q 003605 488 PNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEES 567 (808)
Q Consensus 488 ~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~ 567 (808)
++|+|.++++.. ....+++.+++.++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++.......
T Consensus 84 ~~~~L~~~l~~~--~~~~~~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~ 158 (261)
T cd05072 84 AKGSLLDFLKSD--EGGKVLLPKLIDFSAQIAEGMAYIERKN---YIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY 158 (261)
T ss_pred CCCcHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEecCCCcEEECCCccceecCCCce
Confidence 999999999642 2346889999999999999999999987 99999999999999999999999999986543221
Q ss_pred cccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhcccccccccccCCC
Q 003605 568 RHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPS 646 (808)
Q Consensus 568 ~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~ 646 (808)
.......++..|+|||++....++.++|||||||++|||+| |+.||..... .....+.... . .
T Consensus 159 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~---~~~~~~~~~~----~------~-- 222 (261)
T cd05072 159 -TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSN---SDVMSALQRG----Y------R-- 222 (261)
T ss_pred -eccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCH---HHHHHHHHcC----C------C--
Confidence 11223345678999999998889999999999999999999 9999864221 1222221100 0 0
Q ss_pred CCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 003605 647 LGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKL 686 (808)
Q Consensus 647 l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~ 686 (808)
..........+.+++.+|+..+|++||+++++.+.|++
T Consensus 223 --~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 260 (261)
T cd05072 223 --MPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDD 260 (261)
T ss_pred --CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 01111234578899999999999999999999999975
No 40
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=2.5e-38 Score=346.14 Aligned_cols=252 Identities=25% Similarity=0.381 Sum_probs=204.4
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc---chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEE
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD---QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVY 484 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~---~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~ 484 (808)
++|++.+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|++++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 47899999999999999999976 68899999997532 234567889999999999999999999999999999999
Q ss_pred eecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccc
Q 003605 485 ELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMD 564 (808)
Q Consensus 485 Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~ 564 (808)
||+++|+|.++++. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 81 e~~~g~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~ 153 (333)
T cd05600 81 EYVPGGDFRTLLNN----LGVLSEDHARFYMAEMFEAVDALHELG---YIHRDLKPENFLIDASGHIKLTDFGLSKGIVT 153 (333)
T ss_pred eCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEEEeCcCCccccc
Confidence 99999999999952 345889999999999999999999998 99999999999999999999999999975432
Q ss_pred ccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCc-chhHHhhhhhccccccccccc
Q 003605 565 EESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQ-ENLVAWARPLLTSREGLERII 643 (808)
Q Consensus 565 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~-~~lv~w~~~~~~~~~~l~~iv 643 (808)
......||..|+|||++.+..++.++|||||||+||||++|+.||........ ..+..|.. .+.
T Consensus 154 -----~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~-------~~~--- 218 (333)
T cd05600 154 -----YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKYWKE-------TLQ--- 218 (333)
T ss_pred -----ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHhccc-------ccc---
Confidence 22345689999999999999999999999999999999999999975332111 11111110 000
Q ss_pred CCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 644 DPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 644 D~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
.+.. .........++.+++.+||..+|++||++.|+++.
T Consensus 219 ~~~~-~~~~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 219 RPVY-DDPRFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred CCCC-CccccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 0100 00012334678899999999999999999999875
No 41
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6e-39 Score=357.54 Aligned_cols=249 Identities=24% Similarity=0.395 Sum_probs=209.9
Q ss_pred CcceeeeeeecCcEEEEEEEe-eCCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecC
Q 003605 410 NFDASRILGEGGFGLVYSGVL-DDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIP 488 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l-~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~ 488 (808)
.|...+.||+|+.|.||.+.. .+++.||||++........+-+++|+.+|+..+|+|||++++.|..+++++.|||||+
T Consensus 274 ~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym~ 353 (550)
T KOG0578|consen 274 KYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYME 353 (550)
T ss_pred hhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeecC
Confidence 455567899999999999984 4788999999987777777889999999999999999999999999999999999999
Q ss_pred CCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccccc
Q 003605 489 NGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESR 568 (808)
Q Consensus 489 ~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~ 568 (808)
+|+|.|.+.. ..+++.++..|+.+++.||+|||.++ |+|||||.+||||+.++++||+|||+|..+.....
T Consensus 354 ggsLTDvVt~-----~~~~E~qIA~Icre~l~aL~fLH~~g---IiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~- 424 (550)
T KOG0578|consen 354 GGSLTDVVTK-----TRMTEGQIAAICREILQGLKFLHARG---IIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS- 424 (550)
T ss_pred CCchhhhhhc-----ccccHHHHHHHHHHHHHHHHHHHhcc---eeeeccccceeEeccCCcEEEeeeeeeeccccccC-
Confidence 9999999853 34999999999999999999999998 99999999999999999999999999987755433
Q ss_pred ccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCC
Q 003605 569 HISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLG 648 (808)
Q Consensus 569 ~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~ 648 (808)
..+..+||+.|||||++....|..|.||||||++++||+-|..||-...+.. .-|. +. .... +.
T Consensus 425 -KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYlnE~Plr----AlyL---Ia-~ng~-----P~-- 488 (550)
T KOG0578|consen 425 -KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLNENPLR----ALYL---IA-TNGT-----PK-- 488 (550)
T ss_pred -ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccCCChHH----HHHH---Hh-hcCC-----CC--
Confidence 3456789999999999999999999999999999999999999996432211 1110 11 0111 11
Q ss_pred CCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 649 NDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 649 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
...+......|.+++.+||+.|+++|++++|+|++
T Consensus 489 lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~H 523 (550)
T KOG0578|consen 489 LKNPEKLSPELKDFLDRCLVVDVEQRASAKELLEH 523 (550)
T ss_pred cCCccccCHHHHHHHHHHhhcchhcCCCHHHHhcC
Confidence 12234456789999999999999999999999875
No 42
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=1.9e-38 Score=357.66 Aligned_cols=264 Identities=26% Similarity=0.389 Sum_probs=207.9
Q ss_pred HhCCcceeeeeeecCcEEEEEEEee------CCCEEEEEEeeccc-chhhHHHHHHHHHHhhcc-cccceeEEeeeeecc
Q 003605 407 ATGNFDASRILGEGGFGLVYSGVLD------DGTKVAVKVLKRVD-QQGGREFLAEVEMLSRLH-HRNLVKLIGICIEEQ 478 (808)
Q Consensus 407 at~~f~~~~~LG~G~fG~VYkg~l~------dg~~VAVK~lk~~~-~~~~~~f~~Ei~iL~~L~-HpNIV~L~g~~~~~~ 478 (808)
..++|.+.++||+|+||.||+|+.. .+..||||+++... ....+.|.+|+++|.++. |+||++++++|.+.+
T Consensus 35 ~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~ 114 (400)
T cd05105 35 PRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSG 114 (400)
T ss_pred cccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCC
Confidence 3567888999999999999999853 23469999997532 334567999999999996 999999999999999
Q ss_pred ceEEEEeecCCCCcccccccccc---------------------------------------------------------
Q 003605 479 ARCLVYELIPNGSVESHLHGVDK--------------------------------------------------------- 501 (808)
Q Consensus 479 ~~~LV~Ey~~~GsL~~~L~~~~~--------------------------------------------------------- 501 (808)
..+||||||++|+|.++|+....
T Consensus 115 ~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (400)
T cd05105 115 PIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEI 194 (400)
T ss_pred ceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhh
Confidence 99999999999999998864311
Q ss_pred -----------------------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeec
Q 003605 502 -----------------------------------ESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLE 546 (808)
Q Consensus 502 -----------------------------------~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd 546 (808)
....++|.++++++.|+++||+|||+.+ |+||||||+|||++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dikp~Nill~ 271 (400)
T cd05105 195 KEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKN---CVHRDLAARNVLLA 271 (400)
T ss_pred hhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHhEEEe
Confidence 0134889999999999999999999988 99999999999999
Q ss_pred CCCcceecccccccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchh
Q 003605 547 HDFTPKVSDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENL 625 (808)
Q Consensus 547 ~~~~vKL~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~l 625 (808)
.++.+||+|||+++...............++..|+|||.+.+..++.++|||||||+||||++ |..||...... ..+
T Consensus 272 ~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~--~~~ 349 (400)
T cd05105 272 QGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVD--STF 349 (400)
T ss_pred CCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchh--HHH
Confidence 999999999999986543222222223456788999999999899999999999999999997 99998643211 111
Q ss_pred HHhhhhhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHH
Q 003605 626 VAWARPLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLVCN 689 (808)
Q Consensus 626 v~w~~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~~ 689 (808)
... .... .....+......+.+++.+||+.+|++||++.+|+++|+.++.
T Consensus 350 ~~~----~~~~----------~~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~~ 399 (400)
T cd05105 350 YNK----IKSG----------YRMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLLP 399 (400)
T ss_pred HHH----HhcC----------CCCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHcC
Confidence 111 0000 0011122344678999999999999999999999999997643
No 43
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=3.3e-38 Score=330.56 Aligned_cols=251 Identities=27% Similarity=0.444 Sum_probs=202.7
Q ss_pred CCcceeeeeeecCcEEEEEEEeeCCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecC
Q 003605 409 GNFDASRILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIP 488 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~ 488 (808)
++|++.+.||+|+||.||++.+.++..+|+|.++.. ....++|.+|++++++++|+||++++++|.+.+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEG-AMSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccC-CccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 357788999999999999999888889999998643 3335689999999999999999999999999999999999999
Q ss_pred CCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccccc
Q 003605 489 NGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESR 568 (808)
Q Consensus 489 ~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~ 568 (808)
+|+|.++++.. ...++|..++.++.+++.||+|||+.+ |+||||||+||++++++.+||+|||+++........
T Consensus 83 ~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~ 156 (256)
T cd05114 83 NGCLLNYLRQR---QGKLSKDMLLSMCQDVCEGMEYLERNS---FIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYT 156 (256)
T ss_pred CCcHHHHHHhC---ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcceEEEcCCCeEEECCCCCccccCCCcee
Confidence 99999998642 235899999999999999999999988 999999999999999999999999998764322211
Q ss_pred ccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCC
Q 003605 569 HISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSL 647 (808)
Q Consensus 569 ~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l 647 (808)
......++..|+|||++....++.++||||||+++|||++ |+.||..... .....+... .. ...
T Consensus 157 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~---~~~~~~i~~----~~---~~~---- 221 (256)
T cd05114 157 -SSSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN---YEVVEMISR----GF---RLY---- 221 (256)
T ss_pred -ccCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH---HHHHHHHHC----CC---CCC----
Confidence 1112235568999999988889999999999999999999 8999864321 122222111 00 000
Q ss_pred CCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 003605 648 GNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQAL 684 (808)
Q Consensus 648 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~L 684 (808)
.+......+.+++.+||+.+|++||++.|+++.|
T Consensus 222 ---~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 222 ---RPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred ---CCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 1122335789999999999999999999999876
No 44
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=2.9e-38 Score=336.52 Aligned_cols=266 Identities=20% Similarity=0.267 Sum_probs=201.5
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc--cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEe
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV--DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYE 485 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~--~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~E 485 (808)
++|++.+.||+|+||+||+++.. +++.||||+++.. .....+.+.+|++++++++|+||+++++++..++..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 47899999999999999999976 6789999999753 23345678899999999999999999999999999999999
Q ss_pred ecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccc
Q 003605 486 LIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDE 565 (808)
Q Consensus 486 y~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~ 565 (808)
|++++.|..+.. ....+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 81 ~~~~~~l~~~~~----~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 153 (287)
T cd07848 81 YVEKNMLELLEE----MPNGVPPEKVRSYIYQLIKAIHWCHKND---IVHRDIKPENLLISHNDVLKLCDFGFARNLSEG 153 (287)
T ss_pred cCCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccCccccccc
Confidence 999877665442 2346899999999999999999999988 999999999999999999999999999865332
Q ss_pred cccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhh-hhh-------ccccc
Q 003605 566 ESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWA-RPL-------LTSRE 637 (808)
Q Consensus 566 ~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~-~~~-------~~~~~ 637 (808)
.. .......|+..|+|||++.+..++.++|||||||++|||++|+.||......+........ .+. .....
T Consensus 154 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd07848 154 SN-ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAEQMKLFYSNP 232 (287)
T ss_pred cc-ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCCCCHHHHHhhhccc
Confidence 21 1223456899999999999989999999999999999999999999653321110000000 000 00000
Q ss_pred ccccccCCCCCC------CCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 638 GLERIIDPSLGN------DVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 638 ~l~~ivD~~l~~------~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
.......+.... .+.......+.+++.+||+.||++||+++|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 233 RFHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred hhcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 000000010000 011123457999999999999999999999875
No 45
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=4.3e-38 Score=334.86 Aligned_cols=257 Identities=27% Similarity=0.471 Sum_probs=205.0
Q ss_pred CCcceeeeeeecCcEEEEEEEe-----eCCCEEEEEEeecc-cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEE
Q 003605 409 GNFDASRILGEGGFGLVYSGVL-----DDGTKVAVKVLKRV-DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCL 482 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l-----~dg~~VAVK~lk~~-~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~L 482 (808)
++|++.+.||+|+||+||+|.+ .++..||+|.++.. ..+...+|.+|++++++++|+||+++++++..++..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 4677889999999999999984 24678999999753 33445689999999999999999999999999999999
Q ss_pred EEeecCCCCcccccccccc-------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCC
Q 003605 483 VYELIPNGSVESHLHGVDK-------------ESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDF 549 (808)
Q Consensus 483 V~Ey~~~GsL~~~L~~~~~-------------~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~ 549 (808)
||||+++++|.++++.... ....+++.+.+.++.|++.||+|||+.+ |+||||||+|||+++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~nili~~~~ 161 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHF---FVHKDLAARNILIGEQL 161 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcC---eehhccccceEEEcCCC
Confidence 9999999999999853211 1235889999999999999999999988 99999999999999999
Q ss_pred cceecccccccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHh
Q 003605 550 TPKVSDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAW 628 (808)
Q Consensus 550 ~vKL~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w 628 (808)
.+||+|||+++...............++..|+|||++.+..++.++|||||||+||||++ |..||..... ..+...
T Consensus 162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~---~~~~~~ 238 (283)
T cd05090 162 HVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN---QEVIEM 238 (283)
T ss_pred cEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH---HHHHHH
Confidence 999999999986543332222233445778999999988889999999999999999999 8888854321 111111
Q ss_pred hhhhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 003605 629 ARPLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALK 685 (808)
Q Consensus 629 ~~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le 685 (808)
... ......+......+.+++.+|++.+|++||++.+|++.|.
T Consensus 239 ~~~--------------~~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 281 (283)
T cd05090 239 VRK--------------RQLLPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLR 281 (283)
T ss_pred HHc--------------CCcCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhh
Confidence 110 0001122234467899999999999999999999999886
No 46
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=1.8e-38 Score=349.29 Aligned_cols=264 Identities=26% Similarity=0.400 Sum_probs=206.5
Q ss_pred hCCcceeeeeeecCcEEEEEEEee------CCCEEEEEEeeccc-chhhHHHHHHHHHHhhc-ccccceeEEeeeeec-c
Q 003605 408 TGNFDASRILGEGGFGLVYSGVLD------DGTKVAVKVLKRVD-QQGGREFLAEVEMLSRL-HHRNLVKLIGICIEE-Q 478 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l~------dg~~VAVK~lk~~~-~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~~~~~-~ 478 (808)
.++|++.++||+|+||.||+|... +++.||+|+++... ....+.+.+|++++.++ +|+||++++++|... .
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~ 85 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG 85 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence 457889999999999999999742 34789999997532 23346788999999999 899999999988654 5
Q ss_pred ceEEEEeecCCCCcccccccccc---------------------------------------------------------
Q 003605 479 ARCLVYELIPNGSVESHLHGVDK--------------------------------------------------------- 501 (808)
Q Consensus 479 ~~~LV~Ey~~~GsL~~~L~~~~~--------------------------------------------------------- 501 (808)
..++++||+++|+|.++++....
T Consensus 86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (337)
T cd05054 86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL 165 (337)
T ss_pred CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence 67899999999999998853211
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccccccccccccccccc
Q 003605 502 ESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRHISTRVMGTFGYV 581 (808)
Q Consensus 502 ~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~ 581 (808)
....++|..+++++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++...............++..|+
T Consensus 166 ~~~~l~~~~~~~~~~qi~~aL~~lH~~~---ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~ 242 (337)
T cd05054 166 YKEPLTLEDLISYSFQVARGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM 242 (337)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcccc
Confidence 0136899999999999999999999988 9999999999999999999999999998654322222222345677899
Q ss_pred cchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCCCCChhhHHHHH
Q 003605 582 APEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGNDVPFDSVAKVA 660 (808)
Q Consensus 582 APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~ 660 (808)
|||++.+..++.++|||||||+||||++ |..||...... ..+.... ... .....+.....++.
T Consensus 243 aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~--~~~~~~~----~~~----------~~~~~~~~~~~~~~ 306 (337)
T cd05054 243 APESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQID--EEFCRRL----KEG----------TRMRAPEYATPEIY 306 (337)
T ss_pred CcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCcc--HHHHHHH----hcc----------CCCCCCccCCHHHH
Confidence 9999999999999999999999999998 99998643221 1111111 000 01111223446789
Q ss_pred HHHHHccccCCCCCCCHHHHHHHHHHHHHh
Q 003605 661 AIASMCVQPEVQHRPFMGEVVQALKLVCNE 690 (808)
Q Consensus 661 ~Li~~Cl~~dP~~RPsm~eVl~~Le~i~~~ 690 (808)
+++.+||+.+|++||++.||+++|+.++++
T Consensus 307 ~l~~~cl~~~p~~RPs~~ell~~l~~~~~~ 336 (337)
T cd05054 307 SIMLDCWHNNPEDRPTFSELVEILGDLLQE 336 (337)
T ss_pred HHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 999999999999999999999999988653
No 47
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=6.2e-39 Score=333.58 Aligned_cols=265 Identities=24% Similarity=0.332 Sum_probs=206.1
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc--cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEe
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV--DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYE 485 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~--~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~E 485 (808)
+.|+...++|+|+||.|||++.+ +|+.||||++... +..-.+-.++||++|++|+|+|+|.|+.+|.....++||+|
T Consensus 2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVFE 81 (396)
T KOG0593|consen 2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVFE 81 (396)
T ss_pred cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEee
Confidence 45777889999999999999976 7999999999753 33445668899999999999999999999999999999999
Q ss_pred ecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccc
Q 003605 486 LIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDE 565 (808)
Q Consensus 486 y~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~ 565 (808)
||+. ++.+-|. .....++.+...+++.|+++|+.|+|+++ +|||||||+||||..++.+||||||+|+.+..
T Consensus 82 ~~dh-TvL~eLe---~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n---~IHRDIKPENILit~~gvvKLCDFGFAR~L~~- 153 (396)
T KOG0593|consen 82 YCDH-TVLHELE---RYPNGVPSELVKKYLYQLLKAIHFCHKNN---CIHRDIKPENILITQNGVVKLCDFGFARTLSA- 153 (396)
T ss_pred ecch-HHHHHHH---hccCCCCHHHHHHHHHHHHHHhhhhhhcC---eecccCChhheEEecCCcEEeccchhhHhhcC-
Confidence 9976 4434343 23345888999999999999999999998 99999999999999999999999999998753
Q ss_pred cccccccccccccccccchhhhc-CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHh--------hhhhcccc
Q 003605 566 ESRHISTRVMGTFGYVAPEYAMT-GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAW--------ARPLLTSR 636 (808)
Q Consensus 566 ~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w--------~~~~~~~~ 636 (808)
.....+..+.|.+|+|||.+.+ -+|....|||+.||++.||++|..-|-...+-++-.++.- .+.++...
T Consensus 154 -pgd~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~prhq~iF~~N 232 (396)
T KOG0593|consen 154 -PGDNYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIPRHQSIFSSN 232 (396)
T ss_pred -CcchhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCHHHHHHhccC
Confidence 3344567789999999999987 6889999999999999999999988865544333222211 11111111
Q ss_pred cccccccCCC------CCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 637 EGLERIIDPS------LGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 637 ~~l~~ivD~~------l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
..+.-+.-|. +...++ ....-+++++..||+.||.+|++-+|++..
T Consensus 233 ~~F~Gv~lP~~~~~epLe~k~p-~~s~~~ld~~k~cL~~dP~~R~sc~qll~H 284 (396)
T KOG0593|consen 233 PFFHGVRLPEPEHPEPLERKYP-KISNVLLDLLKKCLKMDPDDRLSCEQLLHH 284 (396)
T ss_pred CceeeeecCCCCCccchhhhcc-cchHHHHHHHHHHhcCCccccccHHHHhcC
Confidence 1111111111 111122 234578999999999999999999999853
No 48
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=4.1e-38 Score=334.12 Aligned_cols=264 Identities=23% Similarity=0.407 Sum_probs=211.9
Q ss_pred HhCCcceeeeeeecCcEEEEEEEeeC-----CCEEEEEEeecc-cchhhHHHHHHHHHHhhcccccceeEEeeeee-ccc
Q 003605 407 ATGNFDASRILGEGGFGLVYSGVLDD-----GTKVAVKVLKRV-DQQGGREFLAEVEMLSRLHHRNLVKLIGICIE-EQA 479 (808)
Q Consensus 407 at~~f~~~~~LG~G~fG~VYkg~l~d-----g~~VAVK~lk~~-~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~-~~~ 479 (808)
..++|.+.++||+|+||.||+|...+ +..|++|+++.. .....+.+.+|+.++++++|+||+++++++.. ...
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 83 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP 83 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 35688899999999999999999765 688999998754 33445778999999999999999999999876 467
Q ss_pred eEEEEeecCCCCccccccccccC----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecc
Q 003605 480 RCLVYELIPNGSVESHLHGVDKE----SAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSD 555 (808)
Q Consensus 480 ~~LV~Ey~~~GsL~~~L~~~~~~----~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~D 555 (808)
.++++||+++|+|.+++...... ...+++.+++.++.|++.||+|||+.+ ++||||||+||++++++.+||+|
T Consensus 84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kl~d 160 (280)
T cd05043 84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRG---VIHKDIAARNCVIDEELQVKITD 160 (280)
T ss_pred CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccCHhhEEEcCCCcEEECC
Confidence 79999999999999998654322 146899999999999999999999988 99999999999999999999999
Q ss_pred cccccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhcc
Q 003605 556 FGLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLT 634 (808)
Q Consensus 556 FGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~ 634 (808)
||+++...............++..|+|||++.+..++.++|||||||++|||++ |+.||..... ..+..+...
T Consensus 161 ~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~---~~~~~~~~~--- 234 (280)
T cd05043 161 NALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP---FEMAAYLKD--- 234 (280)
T ss_pred CCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH---HHHHHHHHc---
Confidence 999986544333222233456778999999998889999999999999999999 9999964321 222222211
Q ss_pred cccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHh
Q 003605 635 SREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLVCNE 690 (808)
Q Consensus 635 ~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~~~ 690 (808)
... ..........+.+++.+|+..+|++||++.||++.|+.+.++
T Consensus 235 -~~~----------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 235 -GYR----------LAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred -CCC----------CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 000 001112345789999999999999999999999999987653
No 49
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=6.4e-38 Score=330.03 Aligned_cols=255 Identities=27% Similarity=0.421 Sum_probs=206.3
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeec
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELI 487 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~ 487 (808)
.+|.+.+.||+|+||.||+|... +++.||+|+++.. ....+++.+|++++++++|+||++++++|..++..++||||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 84 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC-chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence 45788899999999999999965 5889999998753 344578999999999999999999999999999999999999
Q ss_pred CCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccc
Q 003605 488 PNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEES 567 (808)
Q Consensus 488 ~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~ 567 (808)
++++|.+++... ....++|..++.++.|+++||+|||+.+ ++||||||+|||+++++.+||+|||+++.......
T Consensus 85 ~~~~L~~~~~~~--~~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~ 159 (263)
T cd05052 85 TYGNLLDYLREC--NRQEVNAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTY 159 (263)
T ss_pred CCCcHHHHHHhC--CCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCcEEeCCCcccccccccee
Confidence 999999998642 2345899999999999999999999988 99999999999999999999999999976543221
Q ss_pred cccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhcccccccccccCCC
Q 003605 568 RHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPS 646 (808)
Q Consensus 568 ~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~ 646 (808)
. ......++..|+|||++.+..++.++|||||||++|||++ |..|+..... .. +.... ...
T Consensus 160 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~---~~---~~~~~-----------~~~ 221 (263)
T cd05052 160 T-AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL---SQ---VYELL-----------EKG 221 (263)
T ss_pred e-ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH---HH---HHHHH-----------HCC
Confidence 1 1112234568999999999999999999999999999998 8888864221 11 11111 011
Q ss_pred CCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 003605 647 LGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLV 687 (808)
Q Consensus 647 l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i 687 (808)
.....+......+.+++.+|++.+|++||++.++++.|+.+
T Consensus 222 ~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 222 YRMERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred CCCCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 11122333456799999999999999999999999999865
No 50
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=6.3e-38 Score=343.16 Aligned_cols=245 Identities=24% Similarity=0.342 Sum_probs=200.2
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc---cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEE
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV---DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVY 484 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~---~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~ 484 (808)
++|++.+.||+|+||.||+|+.. +++.||||+++.. .....+.+.+|++++.+++|+||+++++++.+++..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 57889999999999999999975 6889999999753 2234567899999999999999999999999999999999
Q ss_pred eecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccc
Q 003605 485 ELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMD 564 (808)
Q Consensus 485 Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~ 564 (808)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+||||+.++.+||+|||+++....
T Consensus 98 e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~ 170 (329)
T PTZ00263 98 EFVVGGELFTHLRK----AGRFPNDVAKFYHAELVLAFEYLHSKD---IIYRDLKPENLLLDNKGHVKVTDFGFAKKVPD 170 (329)
T ss_pred cCCCCChHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHEEECCCCCEEEeeccCceEcCC
Confidence 99999999999863 235888999999999999999999998 99999999999999999999999999986532
Q ss_pred ccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccC
Q 003605 565 EESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIID 644 (808)
Q Consensus 565 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD 644 (808)
.. ....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ........ .
T Consensus 171 ~~-----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~------~~~~~~i~----------~ 229 (329)
T PTZ00263 171 RT-----FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP------FRIYEKIL----------A 229 (329)
T ss_pred Cc-----ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCH------HHHHHHHh----------c
Confidence 21 234689999999999999999999999999999999999999964221 11111111 1
Q ss_pred CCCCCCCChhhHHHHHHHHHHccccCCCCCCC-----HHHHHHH
Q 003605 645 PSLGNDVPFDSVAKVAAIASMCVQPEVQHRPF-----MGEVVQA 683 (808)
Q Consensus 645 ~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs-----m~eVl~~ 683 (808)
..+ .++......+.+++.+||+.||++|++ +.++++.
T Consensus 230 ~~~--~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 271 (329)
T PTZ00263 230 GRL--KFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKNH 271 (329)
T ss_pred CCc--CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhcC
Confidence 110 112223456889999999999999996 5666543
No 51
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=1.3e-38 Score=349.80 Aligned_cols=262 Identities=25% Similarity=0.343 Sum_probs=204.6
Q ss_pred hCCcceeeeeeecCcEEEEEEE-eeCCCEEEEEEeeccc--chhhHHHHHHHHHHhhcccccceeEEeeeeec--cceEE
Q 003605 408 TGNFDASRILGEGGFGLVYSGV-LDDGTKVAVKVLKRVD--QQGGREFLAEVEMLSRLHHRNLVKLIGICIEE--QARCL 482 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~-l~dg~~VAVK~lk~~~--~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~--~~~~L 482 (808)
.+.|+..++||+|.||.||||+ +.+|+.||+|+++... .....-..+||.||++|+||||++|.+...+. +..||
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 3457777899999999999998 4589999999998543 33445667999999999999999999999877 68899
Q ss_pred EEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccc
Q 003605 483 VYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSA 562 (808)
Q Consensus 483 V~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~ 562 (808)
|+|||+. +|.-++. .....++..++..++.|++.||+|+|..+ |+|||||.+|||||.+|.+||+|||||+.+
T Consensus 196 VFeYMdh-DL~GLl~---~p~vkft~~qIKc~mkQLl~Gl~~cH~~g---vlHRDIK~SNiLidn~G~LKiaDFGLAr~y 268 (560)
T KOG0600|consen 196 VFEYMDH-DLSGLLS---SPGVKFTEPQIKCYMKQLLEGLEYCHSRG---VLHRDIKGSNILIDNNGVLKIADFGLARFY 268 (560)
T ss_pred EEecccc-hhhhhhc---CCCcccChHHHHHHHHHHHHHHHHHhhcC---eeeccccccceEEcCCCCEEeccccceeec
Confidence 9999976 8888775 33456899999999999999999999998 999999999999999999999999999976
Q ss_pred ccccccccccccccccccccchhhhcC-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhH----------Hhhhh
Q 003605 563 MDEESRHISTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLV----------AWARP 631 (808)
Q Consensus 563 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv----------~w~~~ 631 (808)
....... .+..+-|.+|+|||++.+. .|+.+.|+||.||||.||++|+..+....+.++.+.+ .|...
T Consensus 269 ~~~~~~~-~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~~~ 347 (560)
T KOG0600|consen 269 TPSGSAP-YTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWPVS 347 (560)
T ss_pred cCCCCcc-cccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccccc
Confidence 5443333 4556689999999999874 7899999999999999999999998765543332221 12210
Q ss_pred hcccccccccccCC------CCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 632 LLTSREGLERIIDP------SLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 632 ~~~~~~~l~~ivD~------~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
.+. ...++.+ .+.+. -.......++|+..+|..||.+|.|+.++++
T Consensus 348 kLP----~~~~~kp~~~y~r~l~E~-~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 348 KLP----HATIFKPQQPYKRRLRET-FKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred cCC----cccccCCCCcccchHHHH-hccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 010 0011111 11111 1123456788999999999999999999875
No 52
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=7.8e-38 Score=328.93 Aligned_cols=260 Identities=25% Similarity=0.385 Sum_probs=209.5
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeec---ccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEE
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKR---VDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVY 484 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~---~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~ 484 (808)
++|++.+.||+|+||.||+|+.. +++.||||.++. .......+|.+|++++++++|+||+++++++.+.+..++|+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 57889999999999999999965 789999998864 22344567899999999999999999999999999999999
Q ss_pred eecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccc
Q 003605 485 ELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMD 564 (808)
Q Consensus 485 Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~ 564 (808)
||+++|+|.+++.........+++..++.++.|+++||+|||+.+ ++|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~ 158 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCC---eeCCCCCHHHEEEcCCCCEEECccccceeccc
Confidence 999999999988654444456889999999999999999999988 99999999999999999999999999876533
Q ss_pred ccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccC
Q 003605 565 EESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIID 644 (808)
Q Consensus 565 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD 644 (808)
... ......++..|+|||++.+..++.++||||||+++|||++|+.||..... +...+...... ...
T Consensus 159 ~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~----~~~~~~~~~~~-------~~~ 225 (267)
T cd08228 159 KTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM----NLFSLCQKIEQ-------CDY 225 (267)
T ss_pred hhH--HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCccccc----cHHHHHHHHhc-------CCC
Confidence 221 11234578899999999988899999999999999999999999854221 11122111110 000
Q ss_pred CCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 003605 645 PSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLV 687 (808)
Q Consensus 645 ~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i 687 (808)
+ ..........+.+++.+||+.+|++||++.||++.|+.+
T Consensus 226 ~---~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~ 265 (267)
T cd08228 226 P---PLPTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQM 265 (267)
T ss_pred C---CCChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHh
Confidence 1 111223446789999999999999999999999999875
No 53
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=4.1e-38 Score=362.63 Aligned_cols=254 Identities=21% Similarity=0.271 Sum_probs=206.7
Q ss_pred CcceeeeeeecCcEEEEEEEee-C-CCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeec
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-D-GTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELI 487 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-d-g~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~ 487 (808)
.|.+.+.||+|+||.||+|... + ++.||+|.+..........+.+|+++|+.++|+|||+++++|...+..+|||||+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 4889999999999999999854 3 6788999876555555567888999999999999999999999999999999999
Q ss_pred CCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccc
Q 003605 488 PNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEES 567 (808)
Q Consensus 488 ~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~ 567 (808)
++|+|.++|+........+++.++..++.|++.||+|||+.+ |+||||||+||||+.++.+||+|||+++.......
T Consensus 148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~ 224 (478)
T PTZ00267 148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRK---MMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVS 224 (478)
T ss_pred CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCC---EEECCcCHHhEEECCCCcEEEEeCcCceecCCccc
Confidence 999999998754444557899999999999999999999988 99999999999999999999999999986543332
Q ss_pred cccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCC
Q 003605 568 RHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSL 647 (808)
Q Consensus 568 ~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l 647 (808)
........||+.|+|||++.+..++.++|||||||++|||++|+.||..... .. ....... ...
T Consensus 225 ~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~---~~---~~~~~~~----------~~~ 288 (478)
T PTZ00267 225 LDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ---RE---IMQQVLY----------GKY 288 (478)
T ss_pred cccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH---HH---HHHHHHh----------CCC
Confidence 2233456799999999999999999999999999999999999999964221 11 1111110 000
Q ss_pred CCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 648 GNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 648 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
...+......+.+++.+||+.+|++||++.++++.
T Consensus 289 -~~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~~ 323 (478)
T PTZ00267 289 -DPFPCPVSSGMKALLDPLLSKNPALRPTTQQLLHT 323 (478)
T ss_pred -CCCCccCCHHHHHHHHHHhccChhhCcCHHHHHhC
Confidence 01122344678999999999999999999999753
No 54
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=6.4e-38 Score=333.94 Aligned_cols=258 Identities=26% Similarity=0.432 Sum_probs=202.6
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCC----EEEEEEeeccc-chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEE
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGT----KVAVKVLKRVD-QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCL 482 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~----~VAVK~lk~~~-~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~L 482 (808)
++|++.+.||+|+||+||+|++. +++ .+++|.+.... .....++..|+.+++++.|+||+++++++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEE
Confidence 45777889999999999999864 444 47778775432 2334678889999999999999999999864 56789
Q ss_pred EEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccc
Q 003605 483 VYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSA 562 (808)
Q Consensus 483 V~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~ 562 (808)
++||+++|+|.++++. ....++|..++.|+.|++.||+|||+.+ ++||||||+|||+++++.+||+|||+++..
T Consensus 86 i~e~~~~gsL~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~kl~Dfg~~~~~ 159 (279)
T cd05111 86 VTQLSPLGSLLDHVRQ---HRDSLDPQRLLNWCVQIAKGMYYLEEHR---MVHRNLAARNILLKSDSIVQIADFGVADLL 159 (279)
T ss_pred EEEeCCCCcHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEEcCCccceec
Confidence 9999999999999963 2346899999999999999999999988 999999999999999999999999999865
Q ss_pred ccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhccccccccc
Q 003605 563 MDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLER 641 (808)
Q Consensus 563 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ 641 (808)
.............++..|+|||++.++.++.++|||||||++|||++ |+.||..... ..+.++. .... .
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~---~~~~~~~----~~~~---~ 229 (279)
T cd05111 160 YPDDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRP---HEVPDLL----EKGE---R 229 (279)
T ss_pred cCCCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCH---HHHHHHH----HCCC---c
Confidence 43332222334557789999999999999999999999999999998 9999864322 1111111 1111 0
Q ss_pred ccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHh
Q 003605 642 IIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLVCNE 690 (808)
Q Consensus 642 ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~~~ 690 (808)
.. .+......+.+++.+|+..+|++||++.|+++.|+.+.++
T Consensus 230 ~~-------~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~ 271 (279)
T cd05111 230 LA-------QPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARD 271 (279)
T ss_pred CC-------CCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhC
Confidence 01 1112235678899999999999999999999999887653
No 55
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=7.8e-38 Score=329.09 Aligned_cols=257 Identities=26% Similarity=0.430 Sum_probs=203.3
Q ss_pred cceeeeeeecCcEEEEEEEeeC----CCEEEEEEeecc--cchhhHHHHHHHHHHhhcccccceeEEeeeeeccc-----
Q 003605 411 FDASRILGEGGFGLVYSGVLDD----GTKVAVKVLKRV--DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQA----- 479 (808)
Q Consensus 411 f~~~~~LG~G~fG~VYkg~l~d----g~~VAVK~lk~~--~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~----- 479 (808)
|.+.+.||+|+||.||+|.+.. +..||||+++.. .....+++.+|+++++.++|+||+++++++...+.
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 4567899999999999998652 367999998743 23445689999999999999999999999876554
Q ss_pred -eEEEEeecCCCCccccccccc--cCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccc
Q 003605 480 -RCLVYELIPNGSVESHLHGVD--KESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDF 556 (808)
Q Consensus 480 -~~LV~Ey~~~GsL~~~L~~~~--~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DF 556 (808)
.++++||+++|+|.+++.... .....+++..++.++.|++.||+|||+.+ ++||||||+||++++++.+||+||
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~df 157 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRN---FIHRDLAARNCMLREDMTVCVADF 157 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---eeccccchheEEECCCCeEEECCc
Confidence 699999999999999986432 12346899999999999999999999988 999999999999999999999999
Q ss_pred ccccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhccc
Q 003605 557 GLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTS 635 (808)
Q Consensus 557 GLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~ 635 (808)
|+++...............++..|+|||++.+..++.++|||||||++|||++ |..||..... ..+.++..
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~---~~~~~~~~----- 229 (273)
T cd05035 158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVEN---HEIYDYLR----- 229 (273)
T ss_pred cceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHH-----
Confidence 99986543332222222335678999999988889999999999999999999 8888854321 11222211
Q ss_pred ccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 003605 636 REGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLV 687 (808)
Q Consensus 636 ~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i 687 (808)
+.. ....+......+.+++.+|++.||++||++.||++.|+++
T Consensus 230 --------~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 230 --------HGN-RLKQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred --------cCC-CCCCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 000 0112334556899999999999999999999999999875
No 56
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=3.1e-38 Score=344.45 Aligned_cols=242 Identities=25% Similarity=0.341 Sum_probs=196.9
Q ss_pred eeeeecCcEEEEEEEee-CCCEEEEEEeecc---cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecCCC
Q 003605 415 RILGEGGFGLVYSGVLD-DGTKVAVKVLKRV---DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIPNG 490 (808)
Q Consensus 415 ~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~---~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~~G 490 (808)
++||+|+||.||++... +|+.||||+++.. ......++.+|++++++++|+||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999865 7899999999753 2334467889999999999999999999999999999999999999
Q ss_pred CccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccccccc
Q 003605 491 SVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRHI 570 (808)
Q Consensus 491 sL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~~ 570 (808)
+|.+++.. ...+++.++..++.|++.||+|||+.+ |+||||||+||||+.++.+||+|||+++...... ..
T Consensus 81 ~L~~~l~~----~~~~~~~~~~~~~~qi~~~L~~lH~~~---ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~--~~ 151 (323)
T cd05571 81 ELFFHLSR----ERVFSEDRARFYGAEIVSALGYLHSCD---VVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG--AT 151 (323)
T ss_pred cHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC--Cc
Confidence 99999853 346899999999999999999999998 9999999999999999999999999987532211 12
Q ss_pred ccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCCC
Q 003605 571 STRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGND 650 (808)
Q Consensus 571 ~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~~ 650 (808)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..+.... ... + ..
T Consensus 152 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~---~~~~~~~---~~~--------~----~~ 213 (323)
T cd05571 152 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---EKLFELI---LME--------E----IR 213 (323)
T ss_pred ccceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCH---HHHHHHH---HcC--------C----CC
Confidence 2345699999999999999999999999999999999999999964221 1111111 000 0 01
Q ss_pred CChhhHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 003605 651 VPFDSVAKVAAIASMCVQPEVQHRP-----FMGEVVQA 683 (808)
Q Consensus 651 ~~~~~~~~l~~Li~~Cl~~dP~~RP-----sm~eVl~~ 683 (808)
++......+.+++.+||+.||++|| ++.++++.
T Consensus 214 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~h 251 (323)
T cd05571 214 FPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIMEH 251 (323)
T ss_pred CCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHcC
Confidence 2233456788999999999999999 78888653
No 57
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-37 Score=362.25 Aligned_cols=262 Identities=24% Similarity=0.309 Sum_probs=216.3
Q ss_pred HhCCcceeeeeeecCcEEEEEEEeeCC-CEEEEEEeecccchhhHHHHHHHHHHhhcc-cccceeEEee-eee------c
Q 003605 407 ATGNFDASRILGEGGFGLVYSGVLDDG-TKVAVKVLKRVDQQGGREFLAEVEMLSRLH-HRNLVKLIGI-CIE------E 477 (808)
Q Consensus 407 at~~f~~~~~LG~G~fG~VYkg~l~dg-~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~-HpNIV~L~g~-~~~------~ 477 (808)
...++++.++|.+|||+.||.|.+..+ ..||+|++-..++...+...+||++|++|+ |+|||.+++. ... .
T Consensus 35 g~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~ 114 (738)
T KOG1989|consen 35 GSHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGV 114 (738)
T ss_pred CCEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCce
Confidence 446678899999999999999998765 999999998778888999999999999997 9999999993 322 1
Q ss_pred cceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccc
Q 003605 478 QARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFG 557 (808)
Q Consensus 478 ~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFG 557 (808)
-+.+|.||||.+|+|-|++..+... .|++.++++|+.++++|+++||.. .|+|||||||-+||||..+++.||||||
T Consensus 115 ~EvllLmEyC~gg~Lvd~mn~Rlq~--~lte~eVLkIf~dv~~AVa~mH~~-~pPiIHRDLKiENvLls~~g~~KLCDFG 191 (738)
T KOG1989|consen 115 WEVLLLMEYCKGGSLVDFMNTRLQT--RLTEDEVLKIFYDVCEAVAAMHYL-KPPIIHRDLKIENVLLSADGNYKLCDFG 191 (738)
T ss_pred eEEEeehhhccCCcHHHHHHHHHhc--cCChHHHHHHHHHHHHHHHHHhcC-CCccchhhhhhhheEEcCCCCEEeCccc
Confidence 3568999999999999999754433 499999999999999999999988 5889999999999999999999999999
Q ss_pred ccccccccccc-----cccc--ccccccccccchhhh---cCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHH
Q 003605 558 LARSAMDEESR-----HIST--RVMGTFGYVAPEYAM---TGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVA 627 (808)
Q Consensus 558 La~~~~~~~~~-----~~~~--~~~Gt~~Y~APE~l~---~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~ 627 (808)
.|......... .+.. ...-|+.|+|||++. +...++|+|||+|||+||-|+....||+...
T Consensus 192 Satt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg--------- 262 (738)
T KOG1989|consen 192 SATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESG--------- 262 (738)
T ss_pred ccccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCc---------
Confidence 98643221100 0000 123589999999875 5678999999999999999999999997432
Q ss_pred hhhhhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHhh
Q 003605 628 WARPLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLVCNEC 691 (808)
Q Consensus 628 w~~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~~~~ 691 (808)
-..|++..+.-.....+...|.+||+.||+.||++||++.||++.+.++....
T Consensus 263 -----------~laIlng~Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~ 315 (738)
T KOG1989|consen 263 -----------KLAILNGNYSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKP 315 (738)
T ss_pred -----------ceeEEeccccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCC
Confidence 22355555444444578899999999999999999999999999998877654
No 58
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=5.1e-38 Score=327.94 Aligned_cols=248 Identities=29% Similarity=0.440 Sum_probs=197.9
Q ss_pred eeeeecCcEEEEEEEee-CCCEEEEEEeecc-cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecCCCCc
Q 003605 415 RILGEGGFGLVYSGVLD-DGTKVAVKVLKRV-DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIPNGSV 492 (808)
Q Consensus 415 ~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~-~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~~GsL 492 (808)
+.||+|+||.||+|+.. +++.||+|.+... .......|.+|++++++++|+||++++++|...+..++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 36999999999999975 7899999987643 334456899999999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccccccccc
Q 003605 493 ESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRHIST 572 (808)
Q Consensus 493 ~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~~~~ 572 (808)
.++++. ....++|.+++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++.............
T Consensus 81 ~~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~ 154 (252)
T cd05084 81 LTFLRT---EGPRLKVKELIQMVENAAAGMEYLESKH---CIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGG 154 (252)
T ss_pred HHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEEcCCCcEEECccccCcccccccccccCC
Confidence 999863 2345899999999999999999999988 9999999999999999999999999987543211111111
Q ss_pred ccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCCCC
Q 003605 573 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGNDV 651 (808)
Q Consensus 573 ~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~~~ 651 (808)
....+..|+|||.+.++.++.++|||||||++|||++ |..||..... ..... .++.......
T Consensus 155 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~---~~~~~--------------~~~~~~~~~~ 217 (252)
T cd05084 155 MKQIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSN---QQTRE--------------AIEQGVRLPC 217 (252)
T ss_pred CCCCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCH---HHHHH--------------HHHcCCCCCC
Confidence 1223467999999999999999999999999999998 8888854221 11111 1111111122
Q ss_pred ChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 003605 652 PFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALK 685 (808)
Q Consensus 652 ~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le 685 (808)
+......+.+++.+|++.+|++||++.||+++|+
T Consensus 218 ~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 218 PELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 3334568899999999999999999999999886
No 59
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-38 Score=344.08 Aligned_cols=267 Identities=28% Similarity=0.413 Sum_probs=202.7
Q ss_pred cceeeeeeecCcEEEEEEEeeCCCEEEEEEeecccchhhHHHHHHHHHHhh--cccccceeEEeeeeecc----ceEEEE
Q 003605 411 FDASRILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQGGREFLAEVEMLSR--LHHRNLVKLIGICIEEQ----ARCLVY 484 (808)
Q Consensus 411 f~~~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~--L~HpNIV~L~g~~~~~~----~~~LV~ 484 (808)
..+.++||+|+||.||||.+. ++.||||++. .+..+.|.+|-+|++. ++|+||++|+++-.... +++||+
T Consensus 212 l~l~eli~~Grfg~V~KaqL~-~~~VAVKifp---~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywLVt 287 (534)
T KOG3653|consen 212 LQLLELIGRGRFGCVWKAQLD-NRLVAVKIFP---EQEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWLVT 287 (534)
T ss_pred hhhHHHhhcCccceeehhhcc-CceeEEEecC---HHHHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeEEe
Confidence 344578999999999999997 5999999986 4556789999998885 58999999999976555 889999
Q ss_pred eecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcC------CCcEEeeeecccCeeecCCCcceeccccc
Q 003605 485 ELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDS------SPRVIHRDFKSSNILLEHDFTPKVSDFGL 558 (808)
Q Consensus 485 Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~------~p~IiHrDIKpsNILLd~~~~vKL~DFGL 558 (808)
||.++|+|.+||. ...++|....+|+..+++||+|||+.. +|+|+|||||++||||.+|+++.|+||||
T Consensus 288 ~fh~kGsL~dyL~-----~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGL 362 (534)
T KOG3653|consen 288 EFHPKGSLCDYLK-----ANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGL 362 (534)
T ss_pred eeccCCcHHHHHH-----hccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccce
Confidence 9999999999995 246999999999999999999999763 57899999999999999999999999999
Q ss_pred ccccccccccccccccccccccccchhhhcCC-C-----ccccceeeHHHHHHHHHhCCCCCCC-CCCCCcchhH-----
Q 003605 559 ARSAMDEESRHISTRVMGTFGYVAPEYAMTGH-L-----LVKSDVYSYGVVILELLSGRKPVDM-TQPPGQENLV----- 626 (808)
Q Consensus 559 a~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~-~-----s~kSDVwSfGvvLlELlTG~~P~~~-~~~~~~~~lv----- 626 (808)
|..+.........-..+||.+|||||++.+.- + -.+.||||+|.|||||++.-.-++. ..++-+.-..
T Consensus 363 Al~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~ 442 (534)
T KOG3653|consen 363 ALRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGN 442 (534)
T ss_pred eEEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcC
Confidence 98776443333333478999999999987542 2 2368999999999999997655432 1111111000
Q ss_pred ----HhhhhhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHh
Q 003605 627 ----AWARPLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLVCNE 690 (808)
Q Consensus 627 ----~w~~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~~~ 690 (808)
+-++.....+.....+-|... ....+..+.+.+..||+.|++.|-|+.=|.+.+.++...
T Consensus 443 hPt~e~mq~~VV~kK~RP~~p~~W~----~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~ 506 (534)
T KOG3653|consen 443 HPTLEEMQELVVRKKQRPKIPDAWR----KHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMML 506 (534)
T ss_pred CCCHHHHHHHHHhhccCCCChhhhh----cCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhcc
Confidence 111111111111222222111 125678899999999999999999999998888776443
No 60
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6e-38 Score=340.23 Aligned_cols=263 Identities=23% Similarity=0.383 Sum_probs=208.8
Q ss_pred hCCcceeeeeeecCcEEEEEEEe-eCCCEEEEEEeecc-cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEe
Q 003605 408 TGNFDASRILGEGGFGLVYSGVL-DDGTKVAVKVLKRV-DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYE 485 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l-~dg~~VAVK~lk~~-~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~E 485 (808)
.+.|++.++||.|..++||+|+. ..++.||||++.-. .....+.+.+|+..|+.++||||++++..|..+..+|+||.
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp 104 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP 104 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence 46789999999999999999995 46799999999732 23336889999999999999999999999999999999999
Q ss_pred ecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccc
Q 003605 486 LIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDE 565 (808)
Q Consensus 486 y~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~ 565 (808)
||.+||+.+.++..-.. .+++..+..|+.++++||.|||.++ .||||||+.|||||.+|.+||+|||.+..+.+.
T Consensus 105 fMa~GS~ldIik~~~~~--Gl~E~~Ia~iLre~LkaL~YLH~~G---~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~ 179 (516)
T KOG0582|consen 105 FMAGGSLLDIIKTYYPD--GLEEASIATILREVLKALDYLHQNG---HIHRDVKAGNILIDSDGTVKLADFGVSASLFDS 179 (516)
T ss_pred hhcCCcHHHHHHHHccc--cccHHHHHHHHHHHHHHHHHHHhcC---ceecccccccEEEcCCCcEEEcCceeeeeeccc
Confidence 99999999999754433 4899999999999999999999999 999999999999999999999999998766554
Q ss_pred cccccc--cccccccccccchhhhc--CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccccccccc
Q 003605 566 ESRHIS--TRVMGTFGYVAPEYAMT--GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLER 641 (808)
Q Consensus 566 ~~~~~~--~~~~Gt~~Y~APE~l~~--~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ 641 (808)
..+... ...+||+.|||||+++. ..|+.|+||||||+...||.+|..||....+- ..-+... .+....
T Consensus 180 G~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPm-kvLl~tL-------qn~pp~ 251 (516)
T KOG0582|consen 180 GDRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPM-KVLLLTL-------QNDPPT 251 (516)
T ss_pred CceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChH-HHHHHHh-------cCCCCC
Confidence 432221 45689999999999654 46899999999999999999999999754321 1111110 011111
Q ss_pred ccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 642 IIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 642 ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
.....+..+........+.+++..||++||++|||++++++.
T Consensus 252 ~~t~~~~~d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlkh 293 (516)
T KOG0582|consen 252 LLTSGLDKDEDKKFSKSFREMIALCLVKDPSKRPTASKLLKH 293 (516)
T ss_pred cccccCChHHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhcc
Confidence 111111112222344579999999999999999999999863
No 61
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-38 Score=349.67 Aligned_cols=265 Identities=26% Similarity=0.411 Sum_probs=223.0
Q ss_pred HHHHHHhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccce
Q 003605 402 SEIEKATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQAR 480 (808)
Q Consensus 402 ~el~~at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~ 480 (808)
++++--..++...++||-|-||.||.|+++ -.-.||||.|+.. .-..++|+.|..+|+.++|+|+|+|+|+|..+...
T Consensus 260 DkWEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKED-tMeveEFLkEAAvMKeikHpNLVqLLGVCT~EpPF 338 (1157)
T KOG4278|consen 260 DKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPF 338 (1157)
T ss_pred chhhccchheeeeeccCCCcccceeeeeeeccceeeehhhhhhc-chhHHHHHHHHHHHHhhcCccHHHHhhhhccCCCe
Confidence 444444556777899999999999999987 3467999999864 45578999999999999999999999999999999
Q ss_pred EEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccc
Q 003605 481 CLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLAR 560 (808)
Q Consensus 481 ~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~ 560 (808)
|+|+|||.+|+|.+||+.+.+ ..++--..+.+|.||+.||+||..++ +|||||.++|+|+.++..+||+||||++
T Consensus 339 YIiTEfM~yGNLLdYLRecnr--~ev~avvLlyMAtQIsSaMeYLEkkn---FIHRDLAARNCLVgEnhiVKvADFGLsR 413 (1157)
T KOG4278|consen 339 YIITEFMCYGNLLDYLRECNR--SEVPAVVLLYMATQISSAMEYLEKKN---FIHRDLAARNCLVGENHIVKVADFGLSR 413 (1157)
T ss_pred EEEEecccCccHHHHHHHhch--hhcchhHHHHHHHHHHHHHHHHHHhh---hhhhhhhhhhccccccceEEeeccchhh
Confidence 999999999999999986544 34666778999999999999999988 9999999999999999999999999999
Q ss_pred ccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhccccccc
Q 003605 561 SAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGL 639 (808)
Q Consensus 561 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l 639 (808)
.+..+.+.. .....-...|.|||-+....++.|+|||+|||+||||.| |..||-.-+ ...+
T Consensus 414 lMtgDTYTA-HAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGid-----------------lSqV 475 (1157)
T KOG4278|consen 414 LMTGDTYTA-HAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGID-----------------LSQV 475 (1157)
T ss_pred hhcCCceec-ccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCcc-----------------HHHH
Confidence 765433221 112233578999999999999999999999999999999 888885321 1123
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHh
Q 003605 640 ERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLVCNE 690 (808)
Q Consensus 640 ~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~~~ 690 (808)
..++...++.+.++.+..++.+|+++||+++|.+||+++|+.+.++.+..+
T Consensus 476 Y~LLEkgyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~~ 526 (1157)
T KOG4278|consen 476 YGLLEKGYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFSS 526 (1157)
T ss_pred HHHHhccccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhcc
Confidence 345555666677888999999999999999999999999999999877654
No 62
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=5.3e-38 Score=337.19 Aligned_cols=245 Identities=23% Similarity=0.297 Sum_probs=200.4
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc---cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEE
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV---DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVY 484 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~---~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~ 484 (808)
++|++.+.||+|+||.||+|... +++.||||+++.. .....+.+.+|++++++++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 47889999999999999999976 6899999998642 2234567889999999999999999999999999999999
Q ss_pred eecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccc
Q 003605 485 ELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMD 564 (808)
Q Consensus 485 Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~ 564 (808)
||+++|+|.++++. ...+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++....
T Consensus 81 e~~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~ 153 (291)
T cd05612 81 EYVPGGELFSYLRN----SGRFSNSTGLFYASEIVCALEYLHSKE---IVYRDLKPENILLDKEGHIKLTDFGFAKKLRD 153 (291)
T ss_pred eCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEEecCcchhccC
Confidence 99999999999853 346899999999999999999999998 99999999999999999999999999976532
Q ss_pred ccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccC
Q 003605 565 EESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIID 644 (808)
Q Consensus 565 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD 644 (808)
. .....|++.|+|||++.+..++.++|||||||++|||++|+.||..... ..+ ......
T Consensus 154 ~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~---~~~---~~~i~~---------- 212 (291)
T cd05612 154 R-----TWTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNP---FGI---YEKILA---------- 212 (291)
T ss_pred C-----cccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHH---HHHHHh----------
Confidence 1 1234689999999999988899999999999999999999999964321 111 111111
Q ss_pred CCCCCCCChhhHHHHHHHHHHccccCCCCCCC-----HHHHHHH
Q 003605 645 PSLGNDVPFDSVAKVAAIASMCVQPEVQHRPF-----MGEVVQA 683 (808)
Q Consensus 645 ~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs-----m~eVl~~ 683 (808)
.. ..++......+.+++.+||+.||++|++ +.|+++.
T Consensus 213 ~~--~~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 213 GK--LEFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred CC--cCCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 00 0122223457889999999999999995 7777654
No 63
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=8.9e-38 Score=331.81 Aligned_cols=259 Identities=29% Similarity=0.469 Sum_probs=204.9
Q ss_pred HhCCcceeeeeeecCcEEEEEEEeeC------CCEEEEEEeeccc-chhhHHHHHHHHHHhhcccccceeEEeeeeeccc
Q 003605 407 ATGNFDASRILGEGGFGLVYSGVLDD------GTKVAVKVLKRVD-QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQA 479 (808)
Q Consensus 407 at~~f~~~~~LG~G~fG~VYkg~l~d------g~~VAVK~lk~~~-~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~ 479 (808)
.+++|.+.+.||+|+||.||+|.+.+ +..||+|.+.... ......|.+|+.++++++|+||+++++++.+.+.
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP 83 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 35678999999999999999999753 5678999886433 3445679999999999999999999999999899
Q ss_pred eEEEEeecCCCCcccccccccc---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCC---ccee
Q 003605 480 RCLVYELIPNGSVESHLHGVDK---ESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDF---TPKV 553 (808)
Q Consensus 480 ~~LV~Ey~~~GsL~~~L~~~~~---~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~---~vKL 553 (808)
.++||||+++++|.++++.... ....++|.++++++.|++.||+|||+.+ ++||||||+|||++.++ .+||
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~nil~~~~~~~~~~kl 160 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENH---FIHRDIAARNCLLTCKGPGRVAKI 160 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchheEEEeccCCCcceEe
Confidence 9999999999999999965321 1235899999999999999999999988 99999999999998754 5999
Q ss_pred cccccccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhh
Q 003605 554 SDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPL 632 (808)
Q Consensus 554 ~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~ 632 (808)
+|||+++................+..|+|||++.+..++.++|||||||++|||++ |+.||+.... ..+....
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~---~~~~~~~--- 234 (277)
T cd05036 161 ADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTN---QEVMEFV--- 234 (277)
T ss_pred ccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH---HHHHHHH---
Confidence 99999986532222111122234568999999999999999999999999999997 9999864322 1111111
Q ss_pred cccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 003605 633 LTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALK 685 (808)
Q Consensus 633 ~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le 685 (808)
........+......+.+++.+|++.+|++||++.+|++.|+
T Consensus 235 -----------~~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 235 -----------TGGGRLDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred -----------HcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 001111123334567899999999999999999999999886
No 64
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-37 Score=346.84 Aligned_cols=249 Identities=27% Similarity=0.395 Sum_probs=205.2
Q ss_pred HHhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc----cc-hhhHHHHHHHHHHhhcc-cccceeEEeeeeecc
Q 003605 406 KATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV----DQ-QGGREFLAEVEMLSRLH-HRNLVKLIGICIEEQ 478 (808)
Q Consensus 406 ~at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~----~~-~~~~~f~~Ei~iL~~L~-HpNIV~L~g~~~~~~ 478 (808)
...++|.+.+.||+|.||+|+.|... +++.||||++.+. .. ...+.+.+|+.++++++ ||||++++.++....
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 35678999999999999999999854 7899999977542 11 33456778999999998 999999999999999
Q ss_pred ceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCC-Ccceecccc
Q 003605 479 ARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHD-FTPKVSDFG 557 (808)
Q Consensus 479 ~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~-~~vKL~DFG 557 (808)
..++||||+.+|+|.+++.. ..++.+.+..+++.|++.|++|||+++ |+|||||++|||||.+ +++||+|||
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~----~g~l~E~~ar~~F~Qlisav~y~H~~g---i~HRDLK~ENilld~~~~~~Kl~DFG 166 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVN----KGRLKEDEARKYFRQLISAVAYCHSRG---IVHRDLKPENILLDGNEGNLKLSDFG 166 (370)
T ss_pred eEEEEEEecCCccHHHHHHH----cCCCChHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEecCCCCCEEEeccc
Confidence 99999999999999999963 456888999999999999999999998 9999999999999999 999999999
Q ss_pred cccccccccccccccccccccccccchhhhcCC-Cc-cccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccc
Q 003605 558 LARSAMDEESRHISTRVMGTFGYVAPEYAMTGH-LL-VKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTS 635 (808)
Q Consensus 558 La~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~-~s-~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~ 635 (808)
++.... .........+||+.|+|||++.+.. |+ .++||||+||+||.|++|+.||+... .....+.+...
T Consensus 167 ~s~~~~--~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~------~~~l~~ki~~~ 238 (370)
T KOG0583|consen 167 LSAISP--GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSN------VPNLYRKIRKG 238 (370)
T ss_pred cccccC--CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCcc------HHHHHHHHhcC
Confidence 998653 1223345678999999999999877 75 78999999999999999999998522 11111111111
Q ss_pred ccccccccCCCCCCCCChhh-HHHHHHHHHHccccCCCCCCCHHHHH
Q 003605 636 REGLERIIDPSLGNDVPFDS-VAKVAAIASMCVQPEVQHRPFMGEVV 681 (808)
Q Consensus 636 ~~~l~~ivD~~l~~~~~~~~-~~~l~~Li~~Cl~~dP~~RPsm~eVl 681 (808)
.- .++... ..++..++.+|+..||.+|+++.||+
T Consensus 239 ~~------------~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~ 273 (370)
T KOG0583|consen 239 EF------------KIPSYLLSPEARSLIEKMLVPDPSTRITLLEIL 273 (370)
T ss_pred Cc------------cCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHh
Confidence 11 112222 57889999999999999999999998
No 65
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=2.7e-37 Score=323.93 Aligned_cols=259 Identities=25% Similarity=0.419 Sum_probs=211.1
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeec---ccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEE
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKR---VDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVY 484 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~---~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~ 484 (808)
++|++.+.||+|+||.||+|... +|+.||+|.++. ......+++.+|++++++++|+||+++++++.+.+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 67999999999999999999976 889999998863 22334568999999999999999999999999999999999
Q ss_pred eecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccc
Q 003605 485 ELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMD 564 (808)
Q Consensus 485 Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~ 564 (808)
||+++|+|.+++.........+++.+++.++.++++||+|||+.+ |+||||+|+||+++.++.++|+|||+++....
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~ 158 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKR---IMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecCCcChhhEEECCCCcEEEeccceeeeccC
Confidence 999999999998654444556899999999999999999999988 99999999999999999999999999875432
Q ss_pred ccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccC
Q 003605 565 EESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIID 644 (808)
Q Consensus 565 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD 644 (808)
... ......++..|+|||++.+..++.++|||||||++|||++|+.||.... .++.++......
T Consensus 159 ~~~--~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~----~~~~~~~~~~~~---------- 222 (267)
T cd08224 159 KTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK----MNLYSLCKKIEK---------- 222 (267)
T ss_pred CCc--ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC----ccHHHHHhhhhc----------
Confidence 211 1123457889999999998889999999999999999999999985432 122222111110
Q ss_pred CCCCCCCCh-hhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 003605 645 PSLGNDVPF-DSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLV 687 (808)
Q Consensus 645 ~~l~~~~~~-~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i 687 (808)
......+. .....+.+++.+||..+|++||++.+|+++|+.+
T Consensus 223 -~~~~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~ 265 (267)
T cd08224 223 -CDYPPLPADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEM 265 (267)
T ss_pred -CCCCCCChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHh
Confidence 00011111 3446788999999999999999999999999876
No 66
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=6.6e-38 Score=333.09 Aligned_cols=256 Identities=26% Similarity=0.386 Sum_probs=203.7
Q ss_pred CcceeeeeeecCcEEEEEEEee------CCCEEEEEEeecccc-hhhHHHHHHHHHHhhcccccceeEEeeeeeccceEE
Q 003605 410 NFDASRILGEGGFGLVYSGVLD------DGTKVAVKVLKRVDQ-QGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCL 482 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~------dg~~VAVK~lk~~~~-~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~L 482 (808)
+|++.+.||+|+||.||+|... ++..||||+++.... ...++|.+|+.++..++|+||+++++++.+.+..++
T Consensus 6 ~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~~ 85 (283)
T cd05091 6 TVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLSM 85 (283)
T ss_pred HHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceEE
Confidence 3566788999999999999864 246899999975432 234678899999999999999999999999999999
Q ss_pred EEeecCCCCccccccccc------------cCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCc
Q 003605 483 VYELIPNGSVESHLHGVD------------KESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFT 550 (808)
Q Consensus 483 V~Ey~~~GsL~~~L~~~~------------~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~ 550 (808)
++||+.+++|.+++.... .....+++..+++++.|++.||+|||+.+ |+||||||+|||+++++.
T Consensus 86 ~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~ 162 (283)
T cd05091 86 IFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHH---VVHKDLATRNVLVFDKLN 162 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhheEecCCCc
Confidence 999999999999985211 11235889999999999999999999988 999999999999999999
Q ss_pred ceecccccccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhh
Q 003605 551 PKVSDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWA 629 (808)
Q Consensus 551 vKL~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~ 629 (808)
+||+|||+++...............++..|+|||.+.++.++.++|||||||++|||++ |..||..... ..+....
T Consensus 163 ~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~---~~~~~~i 239 (283)
T cd05091 163 VKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN---QDVIEMI 239 (283)
T ss_pred eEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH---HHHHHHH
Confidence 99999999886543332222233456789999999998899999999999999999998 8888754221 1111111
Q ss_pred hhhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 003605 630 RPLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALK 685 (808)
Q Consensus 630 ~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le 685 (808)
.+.. ....+.+....+.+++..|++.+|++||+++||++.|+
T Consensus 240 -------------~~~~-~~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~ 281 (283)
T cd05091 240 -------------RNRQ-VLPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLR 281 (283)
T ss_pred -------------HcCC-cCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhh
Confidence 1111 11223445577899999999999999999999999886
No 67
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=2.1e-37 Score=329.62 Aligned_cols=267 Identities=29% Similarity=0.411 Sum_probs=205.7
Q ss_pred ceeeeeeecCcEEEEEEEe-----eCCCEEEEEEeeccc-chhhHHHHHHHHHHhhcccccceeEEeeeeec--cceEEE
Q 003605 412 DASRILGEGGFGLVYSGVL-----DDGTKVAVKVLKRVD-QQGGREFLAEVEMLSRLHHRNLVKLIGICIEE--QARCLV 483 (808)
Q Consensus 412 ~~~~~LG~G~fG~VYkg~l-----~dg~~VAVK~lk~~~-~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~--~~~~LV 483 (808)
...+.||+|+||+||++.. .++..||+|.++... ....+.|.+|++++++++|+||+++++++... ...++|
T Consensus 7 ~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv 86 (283)
T cd05080 7 KKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGLQLI 86 (283)
T ss_pred eeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceEEEE
Confidence 7789999999999988653 367889999997543 33457889999999999999999999998654 357899
Q ss_pred EeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccc
Q 003605 484 YELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAM 563 (808)
Q Consensus 484 ~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~ 563 (808)
|||+++|+|.+++.. ..++|.+++.++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++...
T Consensus 87 ~e~~~~~~l~~~~~~-----~~l~~~~~~~i~~~l~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~ 158 (283)
T cd05080 87 MEYVPLGSLRDYLPK-----HKLNLAQLLLFAQQICEGMAYLHSQH---YIHRDLAARNVLLDNDRLVKIGDFGLAKAVP 158 (283)
T ss_pred ecCCCCCCHHHHHHH-----cCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccChheEEEcCCCcEEEeecccccccC
Confidence 999999999999852 24899999999999999999999998 9999999999999999999999999997654
Q ss_pred ccccc-ccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccc
Q 003605 564 DEESR-HISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERI 642 (808)
Q Consensus 564 ~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~i 642 (808)
..... .......++..|+|||.+....++.++||||||+++|||+||..|+...... ......+...... ...+.++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~-~~~~~~~~~~~~~-~~~~~~~ 236 (283)
T cd05080 159 EGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKK-FEEMIGPKQGQMT-VVRLIEL 236 (283)
T ss_pred CcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcch-hhhhhcccccccc-hhhhhhh
Confidence 32211 1112234566799999998889999999999999999999999998643221 1111111111000 0111222
Q ss_pred cCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHH
Q 003605 643 IDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLVC 688 (808)
Q Consensus 643 vD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~ 688 (808)
++.......+......+.+++.+|++.+|++||++++|++.|+.+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 237 LERGMRLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hhcCCCCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 2222222234445678999999999999999999999999999764
No 68
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.2e-37 Score=336.22 Aligned_cols=264 Identities=26% Similarity=0.406 Sum_probs=208.5
Q ss_pred hCCcceeeeeeecCcEEEEEEEee--------CCCEEEEEEeecc-cchhhHHHHHHHHHHhhc-ccccceeEEeeeeec
Q 003605 408 TGNFDASRILGEGGFGLVYSGVLD--------DGTKVAVKVLKRV-DQQGGREFLAEVEMLSRL-HHRNLVKLIGICIEE 477 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l~--------dg~~VAVK~lk~~-~~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~~~~~ 477 (808)
.++|.+.+.||+|+||.||++... ++..+|+|.++.. ......++.+|++++.++ +|+||++++++|...
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 357899999999999999999752 2356999999753 234456788999999999 799999999999999
Q ss_pred cceEEEEeecCCCCcccccccccc------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeee
Q 003605 478 QARCLVYELIPNGSVESHLHGVDK------------ESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILL 545 (808)
Q Consensus 478 ~~~~LV~Ey~~~GsL~~~L~~~~~------------~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILL 545 (808)
+..++||||+++|+|.++++.... ....++|.++++++.|++.||+|||+.+ ++||||||+|||+
T Consensus 97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill 173 (307)
T cd05098 97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKK---CIHRDLAARNVLV 173 (307)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHHheEE
Confidence 999999999999999999975321 1235899999999999999999999988 9999999999999
Q ss_pred cCCCcceecccccccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcch
Q 003605 546 EHDFTPKVSDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQEN 624 (808)
Q Consensus 546 d~~~~vKL~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~ 624 (808)
+.++.+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||..... ..
T Consensus 174 ~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~---~~ 250 (307)
T cd05098 174 TEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV---EE 250 (307)
T ss_pred cCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH---HH
Confidence 9999999999999875533221111122234568999999998889999999999999999998 8888853221 11
Q ss_pred hHHhhhhhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHhh
Q 003605 625 LVAWARPLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLVCNEC 691 (808)
Q Consensus 625 lv~w~~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~~~~ 691 (808)
+.... ........+......+.+++.+|+..+|++||++.||++.|+++....
T Consensus 251 ~~~~~--------------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~ 303 (307)
T cd05098 251 LFKLL--------------KEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALT 303 (307)
T ss_pred HHHHH--------------HcCCCCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHh
Confidence 11110 001111122334568889999999999999999999999999987653
No 69
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1e-37 Score=344.45 Aligned_cols=246 Identities=26% Similarity=0.351 Sum_probs=192.9
Q ss_pred cceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc-chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecC
Q 003605 411 FDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD-QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIP 488 (808)
Q Consensus 411 f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~-~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~ 488 (808)
|+..+.||+|+||.||+|+.. +++.||||++.... ....+++.+|++++++++|+||+++++++.+.+..++||||++
T Consensus 76 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 155 (353)
T PLN00034 76 LERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEFMD 155 (353)
T ss_pred HhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEecCC
Confidence 445678999999999999865 78999999996532 3345679999999999999999999999999999999999999
Q ss_pred CCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccccc
Q 003605 489 NGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESR 568 (808)
Q Consensus 489 ~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~ 568 (808)
+|+|.+.. .+.+..+..|+.|++.||+|||+.+ |+|||||++||||++++.+||+|||+++......
T Consensus 156 ~~~L~~~~--------~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~-- 222 (353)
T PLN00034 156 GGSLEGTH--------IADEQFLADVARQILSGIAYLHRRH---IVHRDIKPSNLLINSAKNVKIADFGVSRILAQTM-- 222 (353)
T ss_pred CCcccccc--------cCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEcccccceeccccc--
Confidence 99987643 3566788899999999999999998 9999999999999999999999999997653221
Q ss_pred ccccccccccccccchhhhc-----CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccccccccccc
Q 003605 569 HISTRVMGTFGYVAPEYAMT-----GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERII 643 (808)
Q Consensus 569 ~~~~~~~Gt~~Y~APE~l~~-----~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~iv 643 (808)
.......||..|+|||++.. ...+.++|||||||+||||++|+.||......+...+.... ..
T Consensus 223 ~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~~~~~---~~--------- 290 (353)
T PLN00034 223 DPCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQGDWASLMCAI---CM--------- 290 (353)
T ss_pred ccccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCccHHHHHHHH---hc---------
Confidence 11234568999999998743 23356899999999999999999999733221111111100 00
Q ss_pred CCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 644 DPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 644 D~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
......+.....++.+|+.+||+.||++||++.||++.
T Consensus 291 --~~~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 291 --SQPPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred --cCCCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00011222344678999999999999999999999875
No 70
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-38 Score=351.07 Aligned_cols=253 Identities=25% Similarity=0.379 Sum_probs=210.2
Q ss_pred HhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeec---ccchhhHHHHHHHHHHhhc-ccccceeEEeeeeeccceE
Q 003605 407 ATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKR---VDQQGGREFLAEVEMLSRL-HHRNLVKLIGICIEEQARC 481 (808)
Q Consensus 407 at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~---~~~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~~~~~~~~~ 481 (808)
..++|...+.||+|+|++||+|+.. .++.+|||++.+ ..+...+....|-+.|.+| .||.|++|+-.|.++..+|
T Consensus 71 ~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~sLY 150 (604)
T KOG0592|consen 71 TPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEESLY 150 (604)
T ss_pred ChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccceE
Confidence 4568899999999999999999954 789999999964 2334445677899999999 7999999999999999999
Q ss_pred EEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccc
Q 003605 482 LVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARS 561 (808)
Q Consensus 482 LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~ 561 (808)
+|+||++||+|.++|+.. ..+++.....+|.+|+.||+|||+++ ||||||||+|||||+|+++||+|||-|+.
T Consensus 151 FvLe~A~nGdll~~i~K~----Gsfde~caR~YAAeIldAleylH~~G---IIHRDlKPENILLd~dmhikITDFGsAK~ 223 (604)
T KOG0592|consen 151 FVLEYAPNGDLLDLIKKY----GSFDETCARFYAAEILDALEYLHSNG---IIHRDLKPENILLDKDGHIKITDFGSAKI 223 (604)
T ss_pred EEEEecCCCcHHHHHHHh----CcchHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeEcCCCcEEEeecccccc
Confidence 999999999999999743 35888889999999999999999998 99999999999999999999999999987
Q ss_pred ccccccc---------ccc--cccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhh
Q 003605 562 AMDEESR---------HIS--TRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWAR 630 (808)
Q Consensus 562 ~~~~~~~---------~~~--~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~ 630 (808)
+...... ... ...+||..|.+||++..+..+..+|+|+||||||+|+.|+.||....+ +.
T Consensus 224 l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ne-----yl---- 294 (604)
T KOG0592|consen 224 LSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANE-----YL---- 294 (604)
T ss_pred CChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccH-----HH----
Confidence 6543221 111 347899999999999999999999999999999999999999975432 11
Q ss_pred hhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 003605 631 PLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQAL 684 (808)
Q Consensus 631 ~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~L 684 (808)
.+.+|++ +.-.++........+|+.+.|..||.+|.+..||.++.
T Consensus 295 -------iFqkI~~--l~y~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~Hp 339 (604)
T KOG0592|consen 295 -------IFQKIQA--LDYEFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAHP 339 (604)
T ss_pred -------HHHHHHH--hcccCCCCCCHHHHHHHHHHHccCccccccHHHHhhCc
Confidence 1112221 11234444557889999999999999999999987763
No 71
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=7.5e-38 Score=343.42 Aligned_cols=253 Identities=24% Similarity=0.297 Sum_probs=203.7
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc---cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEE
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV---DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVY 484 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~---~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~ 484 (808)
++|.+.+.||+|+||+||+|... +++.||||+++.. .......+.+|++++..++|+||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 47899999999999999999976 7899999999753 2244567899999999999999999999999999999999
Q ss_pred eecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccc
Q 003605 485 ELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMD 564 (808)
Q Consensus 485 Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~ 564 (808)
||+++|+|.+++... ..+++..++.++.|++.||+|||+.+ |+||||||+||||+.++.+||+|||+++....
T Consensus 81 e~~~~~~L~~~l~~~----~~l~~~~~~~i~~qi~~aL~~LH~~g---iiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~ 153 (350)
T cd05573 81 EYMPGGDLMNLLIRK----DVFPEETARFYIAELVLALDSVHKLG---FIHRDIKPDNILIDADGHIKLADFGLCKKMNK 153 (350)
T ss_pred cCCCCCCHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEeecCCCCccCcc
Confidence 999999999999632 46899999999999999999999988 99999999999999999999999999976543
Q ss_pred cc---------------------------ccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCC
Q 003605 565 EE---------------------------SRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMT 617 (808)
Q Consensus 565 ~~---------------------------~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~ 617 (808)
.. .........||..|+|||++.+..++.++|||||||+||||++|+.||...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~ 233 (350)
T cd05573 154 AKDREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSD 233 (350)
T ss_pred cCcccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCC
Confidence 22 001223456899999999999999999999999999999999999999753
Q ss_pred CCCCcchhHHhhhhhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCC-HHHHHHH
Q 003605 618 QPPGQENLVAWARPLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPF-MGEVVQA 683 (808)
Q Consensus 618 ~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs-m~eVl~~ 683 (808)
... ..........+ .+...........+.+++.+|+. +|++||+ +.|+++.
T Consensus 234 ~~~------~~~~~i~~~~~--------~~~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 234 TLQ------ETYNKIINWKE--------SLRFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred CHH------HHHHHHhccCC--------cccCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 311 11111111000 00000111135678899999997 9999999 9999875
No 72
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=1.2e-37 Score=329.38 Aligned_cols=258 Identities=28% Similarity=0.472 Sum_probs=207.6
Q ss_pred hCCcceeeeeeecCcEEEEEEEeeC------CCEEEEEEeeccc-chhhHHHHHHHHHHhhcccccceeEEeeeeeccce
Q 003605 408 TGNFDASRILGEGGFGLVYSGVLDD------GTKVAVKVLKRVD-QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQAR 480 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l~d------g~~VAVK~lk~~~-~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~ 480 (808)
.++|.+.+.||+|+||.||+|...+ +..||+|.+.... ......|.+|+.++..++|+||+++++++...+..
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT 84 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence 4578899999999999999998642 3689999987542 34456789999999999999999999999999999
Q ss_pred EEEEeecCCCCcccccccccc------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceec
Q 003605 481 CLVYELIPNGSVESHLHGVDK------ESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVS 554 (808)
Q Consensus 481 ~LV~Ey~~~GsL~~~L~~~~~------~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~ 554 (808)
++||||+++|+|.++++.... ....++|..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+
T Consensus 85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~di~p~nill~~~~~~kl~ 161 (277)
T cd05032 85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKK---FVHRDLAARNCMVAEDLTVKIG 161 (277)
T ss_pred EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccChheEEEcCCCCEEEC
Confidence 999999999999999964322 1235889999999999999999999988 9999999999999999999999
Q ss_pred ccccccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhc
Q 003605 555 DFGLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLL 633 (808)
Q Consensus 555 DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~ 633 (808)
|||+++...............++..|+|||.+.++.++.++|||||||++|||+| |+.||..... .....+..
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~---~~~~~~~~--- 235 (277)
T cd05032 162 DFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN---EEVLKFVI--- 235 (277)
T ss_pred CcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCH---HHHHHHHh---
Confidence 9999986544332222233456789999999998899999999999999999998 8888854321 12222111
Q ss_pred ccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 003605 634 TSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALK 685 (808)
Q Consensus 634 ~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le 685 (808)
+. .....+......+.+++.+||+.+|++|||+.|+++.|+
T Consensus 236 ----------~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 236 ----------DG-GHLDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred ----------cC-CCCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 00 011122334578999999999999999999999999886
No 73
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1.6e-37 Score=330.40 Aligned_cols=269 Identities=26% Similarity=0.376 Sum_probs=204.5
Q ss_pred CCcceeeeeeecCcEEEEEEEee-----CCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeec--cceE
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-----DGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEE--QARC 481 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-----dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~--~~~~ 481 (808)
++|++.+.||+|+||.||++..+ ++..||||+++.......++|.+|++++++++|+||+++++++... ...+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 46888899999999999999742 5789999999876666677899999999999999999999987543 4679
Q ss_pred EEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccc
Q 003605 482 LVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARS 561 (808)
Q Consensus 482 LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~ 561 (808)
+|+||+++|+|.+++... ...++|..++.++.|++.||+|||+.+ |+||||||+||++++++.+||+|||+++.
T Consensus 84 lv~e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~~l~~aL~~LH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~ 157 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKH---RERLDHRKLLLYASQICKGMEYLGSKR---YVHRDLATRNILVESENRVKIGDFGLTKV 157 (284)
T ss_pred EEEEecCCCCHHHHHHhc---CcCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCCHhhEEECCCCeEEECCCccccc
Confidence 999999999999999632 235899999999999999999999998 99999999999999999999999999986
Q ss_pred cccccccc-cccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccc---c
Q 003605 562 AMDEESRH-ISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSR---E 637 (808)
Q Consensus 562 ~~~~~~~~-~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~---~ 637 (808)
........ ......++..|+|||++.+..++.++|||||||++|||++|..++...... ............ .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~ 233 (284)
T cd05081 158 LPQDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPAE----FMRMMGNDKQGQMIVY 233 (284)
T ss_pred ccCCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcchh----hhhhcccccccccchH
Confidence 54322211 111222345699999999889999999999999999999987765322110 000000000000 0
Q ss_pred ccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 003605 638 GLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLV 687 (808)
Q Consensus 638 ~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i 687 (808)
.+.++++.......+......+.+++.+||+.+|++|||+.||++.|+.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 234 HLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 00111111111112234456799999999999999999999999999864
No 74
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=1.6e-37 Score=334.61 Aligned_cols=264 Identities=24% Similarity=0.404 Sum_probs=209.2
Q ss_pred HhCCcceeeeeeecCcEEEEEEEee--------CCCEEEEEEeecc-cchhhHHHHHHHHHHhhc-ccccceeEEeeeee
Q 003605 407 ATGNFDASRILGEGGFGLVYSGVLD--------DGTKVAVKVLKRV-DQQGGREFLAEVEMLSRL-HHRNLVKLIGICIE 476 (808)
Q Consensus 407 at~~f~~~~~LG~G~fG~VYkg~l~--------dg~~VAVK~lk~~-~~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~~~~ 476 (808)
..++|.+.+.||+|+||.||+|... ++..||+|.++.. .....+++.+|+.+++.+ +|+||+++++++..
T Consensus 13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 92 (304)
T cd05101 13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 92 (304)
T ss_pred cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence 3567888899999999999999741 2457999998743 234457899999999999 79999999999999
Q ss_pred ccceEEEEeecCCCCcccccccccc------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCee
Q 003605 477 EQARCLVYELIPNGSVESHLHGVDK------------ESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNIL 544 (808)
Q Consensus 477 ~~~~~LV~Ey~~~GsL~~~L~~~~~------------~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNIL 544 (808)
.+..++||||+++|+|.++++.... ....++|.+++.++.|++.||+|||+++ |+||||||+|||
T Consensus 93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Nil 169 (304)
T cd05101 93 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQK---CIHRDLAARNVL 169 (304)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCC---eeecccccceEE
Confidence 9999999999999999999975321 1235889999999999999999999998 999999999999
Q ss_pred ecCCCcceecccccccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcc
Q 003605 545 LEHDFTPKVSDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQE 623 (808)
Q Consensus 545 Ld~~~~vKL~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~ 623 (808)
+++++.+||+|||+++...............++..|+|||++.+..++.++||||||+++|||++ |..||....
T Consensus 170 i~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~----- 244 (304)
T cd05101 170 VTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP----- 244 (304)
T ss_pred EcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC-----
Confidence 99999999999999986543322222223345678999999998889999999999999999998 778875321
Q ss_pred hhHHhhhhhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHh
Q 003605 624 NLVAWARPLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLVCNE 690 (808)
Q Consensus 624 ~lv~w~~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~~~ 690 (808)
...+..... .. .....+......+.+++.+||+.+|++||++.||++.|+++..-
T Consensus 245 -~~~~~~~~~-~~----------~~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~ 299 (304)
T cd05101 245 -VEELFKLLK-EG----------HRMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTL 299 (304)
T ss_pred -HHHHHHHHH-cC----------CcCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHh
Confidence 111111111 00 01112234457789999999999999999999999999987654
No 75
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=1.2e-37 Score=327.46 Aligned_cols=252 Identities=27% Similarity=0.427 Sum_probs=203.1
Q ss_pred CCcceeeeeeecCcEEEEEEEeeCCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecC
Q 003605 409 GNFDASRILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIP 488 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~ 488 (808)
++|.+.+.||+|+||.||+|...++..+|||.++.. ....++|.+|+.++.+++|+||++++++|.+.+..++||||+.
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCC-cccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence 357788999999999999998877778999998743 2335679999999999999999999999998888999999999
Q ss_pred CCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccccc
Q 003605 489 NGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESR 568 (808)
Q Consensus 489 ~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~ 568 (808)
+|+|.++++.. ...++|.++++++.|++.||+|||+.+ ++|+||||+|||++.++.+||+|||+++........
T Consensus 83 ~~~l~~~i~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~ 156 (256)
T cd05113 83 NGCLLNYLREH---GKRFQPSQLLEMCKDVCEGMAYLESKQ---FIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYT 156 (256)
T ss_pred CCcHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCCEEECCCccceecCCCcee
Confidence 99999998632 236899999999999999999999988 999999999999999999999999998765432211
Q ss_pred ccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCC
Q 003605 569 HISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSL 647 (808)
Q Consensus 569 ~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l 647 (808)
......++..|++||++.+..++.++|||||||++|||++ |+.||..... ....... .. ..
T Consensus 157 -~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~---~~~~~~~---~~-~~---------- 218 (256)
T cd05113 157 -SSVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNN---SETVEKV---SQ-GL---------- 218 (256)
T ss_pred -ecCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCH---HHHHHHH---hc-CC----------
Confidence 1112335678999999998889999999999999999999 9999864321 1111111 00 00
Q ss_pred CCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 003605 648 GNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALK 685 (808)
Q Consensus 648 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le 685 (808)
....+......+.+++.+||+.+|++||++.+|++.|+
T Consensus 219 ~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 219 RLYRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred CCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 00111223468899999999999999999999998764
No 76
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=1.5e-37 Score=326.71 Aligned_cols=260 Identities=25% Similarity=0.402 Sum_probs=209.5
Q ss_pred CCcceeeeeeecCcEEEEEEEe-eCCCEEEEEEeecc---cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEE
Q 003605 409 GNFDASRILGEGGFGLVYSGVL-DDGTKVAVKVLKRV---DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVY 484 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l-~dg~~VAVK~lk~~---~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~ 484 (808)
++|++.+.||+|+||.||++.. .+++.+|||.+... ......+|.+|+++++.++|+||+++++++.+.+..+++|
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 4678889999999999999995 47899999988642 2334568899999999999999999999999999999999
Q ss_pred eecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccc
Q 003605 485 ELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMD 564 (808)
Q Consensus 485 Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~ 564 (808)
||+++++|.++++........++|..++.++.++++||+|||+.+ ++|+||||+||+++.++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~ 158 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFSS 158 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCCEEECcchhhhcccc
Confidence 999999999998754444457899999999999999999999988 99999999999999999999999999875533
Q ss_pred ccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccC
Q 003605 565 EESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIID 644 (808)
Q Consensus 565 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD 644 (808)
... ......++..|+|||++.+..++.++||||||+++|||++|..||..... ....+.... .....
T Consensus 159 ~~~--~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~----~~~~~~~~~-------~~~~~ 225 (267)
T cd08229 159 KTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKM----NLYSLCKKI-------EQCDY 225 (267)
T ss_pred CCc--ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccc----hHHHHhhhh-------hcCCC
Confidence 221 11234588899999999988899999999999999999999999854221 111111111 01111
Q ss_pred CCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 003605 645 PSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLV 687 (808)
Q Consensus 645 ~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i 687 (808)
+.+ ........+.+++.+||+.+|++||||.+|++.++++
T Consensus 226 ~~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~ 265 (267)
T cd08229 226 PPL---PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRM 265 (267)
T ss_pred CCC---CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhh
Confidence 111 1123456799999999999999999999999999865
No 77
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=1.9e-37 Score=333.17 Aligned_cols=261 Identities=26% Similarity=0.424 Sum_probs=206.0
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCC--EEEEEEeecc-cchhhHHHHHHHHHHhhc-ccccceeEEeeeeeccceEEE
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGT--KVAVKVLKRV-DQQGGREFLAEVEMLSRL-HHRNLVKLIGICIEEQARCLV 483 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~--~VAVK~lk~~-~~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~~~~~~~~~LV 483 (808)
++|++.++||+|+||.||+|... ++. .+++|.++.. .....++|.+|++++.++ +|+||+++++++.+.+..++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 57888999999999999999875 333 4788988753 334456899999999999 799999999999998999999
Q ss_pred EeecCCCCcccccccccc------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcc
Q 003605 484 YELIPNGSVESHLHGVDK------------ESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTP 551 (808)
Q Consensus 484 ~Ey~~~GsL~~~L~~~~~------------~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~v 551 (808)
+||+++|+|.++++.... ....+++..++.|+.|++.||+|||+.+ |+||||||+|||+++++.+
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~ 158 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQ---FIHRDLAARNVLVGENLAS 158 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCcCCcceEEECCCCeE
Confidence 999999999999964321 1135889999999999999999999988 9999999999999999999
Q ss_pred eecccccccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhh
Q 003605 552 KVSDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWAR 630 (808)
Q Consensus 552 KL~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~ 630 (808)
||+|||++...... ........+..|+|||++....++.++|||||||++|||++ |..||..... .++..
T Consensus 159 kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~---~~~~~--- 229 (297)
T cd05089 159 KIADFGLSRGEEVY---VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTC---AELYE--- 229 (297)
T ss_pred EECCcCCCccccce---eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCH---HHHHH---
Confidence 99999998642211 01111223457999999988889999999999999999998 9999864321 11111
Q ss_pred hhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHhhh
Q 003605 631 PLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLVCNECD 692 (808)
Q Consensus 631 ~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~~~~~ 692 (808)
.. ...+....+......+.+|+.+|++.+|.+||++.+|++.|+.+.+...
T Consensus 230 ~~-----------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~~ 280 (297)
T cd05089 230 KL-----------PQGYRMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEARK 280 (297)
T ss_pred HH-----------hcCCCCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhc
Confidence 11 1111111223344678999999999999999999999999998877653
No 78
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=1.3e-37 Score=337.84 Aligned_cols=237 Identities=23% Similarity=0.271 Sum_probs=192.7
Q ss_pred eeecCcEEEEEEEee-CCCEEEEEEeecc---cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecCCCCc
Q 003605 417 LGEGGFGLVYSGVLD-DGTKVAVKVLKRV---DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIPNGSV 492 (808)
Q Consensus 417 LG~G~fG~VYkg~l~-dg~~VAVK~lk~~---~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~~GsL 492 (808)
||+|+||.||++... +++.||+|+++.. .......+.+|++++.+++|+||+++++++.+.+..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 699999999999975 6789999999742 334456788999999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccccccccc
Q 003605 493 ESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRHIST 572 (808)
Q Consensus 493 ~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~~~~ 572 (808)
.+++.. ...+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++...... ....
T Consensus 81 ~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--~~~~ 151 (312)
T cd05585 81 FHHLQR----EGRFDLSRARFYTAELLCALENLHKFN---VIYRDLKPENILLDYQGHIALCDFGLCKLNMKDD--DKTN 151 (312)
T ss_pred HHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHeEECCCCcEEEEECcccccCccCC--Cccc
Confidence 999853 335899999999999999999999988 9999999999999999999999999987543221 2223
Q ss_pred ccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCCCCC
Q 003605 573 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGNDVP 652 (808)
Q Consensus 573 ~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~~~~ 652 (808)
...||..|+|||++.+..++.++|||||||++|||++|+.||.... ........... . ..++
T Consensus 152 ~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~------~~~~~~~~~~~----------~--~~~~ 213 (312)
T cd05585 152 TFCGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDEN------VNEMYRKILQE----------P--LRFP 213 (312)
T ss_pred cccCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCC------HHHHHHHHHcC----------C--CCCC
Confidence 4568999999999999999999999999999999999999996422 11111111111 0 0122
Q ss_pred hhhHHHHHHHHHHccccCCCCCCCHHHH
Q 003605 653 FDSVAKVAAIASMCVQPEVQHRPFMGEV 680 (808)
Q Consensus 653 ~~~~~~l~~Li~~Cl~~dP~~RPsm~eV 680 (808)
......+.+++.+||+.||++||++..+
T Consensus 214 ~~~~~~~~~li~~~L~~dp~~R~~~~~~ 241 (312)
T cd05585 214 DGFDRDAKDLLIGLLSRDPTRRLGYNGA 241 (312)
T ss_pred CcCCHHHHHHHHHHcCCCHHHcCCCCCH
Confidence 2334678899999999999999864333
No 79
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=2e-37 Score=326.70 Aligned_cols=257 Identities=25% Similarity=0.414 Sum_probs=199.0
Q ss_pred cceeeeeeecCcEEEEEEEeeC-CC--EEEEEEeecc--cchhhHHHHHHHHHHhhcccccceeEEeeeeec------cc
Q 003605 411 FDASRILGEGGFGLVYSGVLDD-GT--KVAVKVLKRV--DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEE------QA 479 (808)
Q Consensus 411 f~~~~~LG~G~fG~VYkg~l~d-g~--~VAVK~lk~~--~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~------~~ 479 (808)
|.+.++||+|+||.||+|.+.+ +. .||+|.++.. .....+.|.+|++++++++|+||++++++|... ..
T Consensus 1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 80 (272)
T cd05075 1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPS 80 (272)
T ss_pred CccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCC
Confidence 3456889999999999999763 33 5899988643 344467899999999999999999999987542 24
Q ss_pred eEEEEeecCCCCccccccccc--cCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccc
Q 003605 480 RCLVYELIPNGSVESHLHGVD--KESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFG 557 (808)
Q Consensus 480 ~~LV~Ey~~~GsL~~~L~~~~--~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFG 557 (808)
.++++||+.+|+|.+++.... .....++|...+.++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||
T Consensus 81 ~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 81 PVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKS---FIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred cEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhheEEcCCCCEEECCCC
Confidence 589999999999998874221 22345899999999999999999999987 9999999999999999999999999
Q ss_pred cccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhcccc
Q 003605 558 LARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSR 636 (808)
Q Consensus 558 La~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~ 636 (808)
+++...............++..|++||++.+..++.++|||||||++|||++ |+.||..... ..+.... ...
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~---~~~~~~~----~~~ 230 (272)
T cd05075 158 LSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVEN---SEIYDYL----RQG 230 (272)
T ss_pred cccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCH---HHHHHHH----HcC
Confidence 9986543222111222345678999999999999999999999999999999 7888854221 1111111 111
Q ss_pred cccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 003605 637 EGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLV 687 (808)
Q Consensus 637 ~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i 687 (808)
+.. ..+......+.+++.+||+.+|++||++.||++.|+.+
T Consensus 231 ~~~----------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 231 NRL----------KQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred CCC----------CCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 100 11223446789999999999999999999999999864
No 80
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=2e-37 Score=326.43 Aligned_cols=257 Identities=25% Similarity=0.457 Sum_probs=205.1
Q ss_pred hCCcceeeeeeecCcEEEEEEEee-CC---CEEEEEEeecc-cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEE
Q 003605 408 TGNFDASRILGEGGFGLVYSGVLD-DG---TKVAVKVLKRV-DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCL 482 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l~-dg---~~VAVK~lk~~-~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~L 482 (808)
.++|+..+.||+|+||.||+|++. ++ ..+|+|.++.. .....+++.+|++++++++|+||+++++++.+.+..++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI 83 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence 356888899999999999999975 33 37999998754 33445689999999999999999999999999999999
Q ss_pred EEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccc
Q 003605 483 VYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSA 562 (808)
Q Consensus 483 V~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~ 562 (808)
||||+++++|.++++. ....++|.+++.++.|++.||+|||+.+ ++||||||+||++++++.+||+|||++...
T Consensus 84 v~e~~~~~~L~~~~~~---~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~ 157 (268)
T cd05063 84 ITEYMENGALDKYLRD---HDGEFSSYQLVGMLRGIAAGMKYLSDMN---YVHRDLAARNILVNSNLECKVSDFGLSRVL 157 (268)
T ss_pred EEEcCCCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccchhhEEEcCCCcEEECCCccceec
Confidence 9999999999999863 2346899999999999999999999988 999999999999999999999999998765
Q ss_pred ccccccccc-cccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhcccccccc
Q 003605 563 MDEESRHIS-TRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLE 640 (808)
Q Consensus 563 ~~~~~~~~~-~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~ 640 (808)
......... .....+..|+|||++....++.++|||||||++|||++ |+.||..... ..+.... ..
T Consensus 158 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~---~~~~~~i---~~------ 225 (268)
T cd05063 158 EDDPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN---HEVMKAI---ND------ 225 (268)
T ss_pred ccccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH---HHHHHHH---hc------
Confidence 432211111 11223457999999998899999999999999999998 9999854321 1111111 10
Q ss_pred cccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 003605 641 RIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLV 687 (808)
Q Consensus 641 ~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i 687 (808)
........+....+.+++.+|++.+|++||++.+|++.|+++
T Consensus 226 -----~~~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 226 -----GFRLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred -----CCCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 011112223456789999999999999999999999999875
No 81
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=8.9e-38 Score=341.11 Aligned_cols=242 Identities=24% Similarity=0.332 Sum_probs=196.2
Q ss_pred eeeeecCcEEEEEEEee-CCCEEEEEEeecc---cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecCCC
Q 003605 415 RILGEGGFGLVYSGVLD-DGTKVAVKVLKRV---DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIPNG 490 (808)
Q Consensus 415 ~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~---~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~~G 490 (808)
++||+|+||.||++... +|+.||+|+++.. .......+.+|++++++++|+||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 46999999999999864 7899999999753 2334567788999999999999999999999999999999999999
Q ss_pred CccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccccccc
Q 003605 491 SVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRHI 570 (808)
Q Consensus 491 sL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~~ 570 (808)
+|.+++.. ...+++..++.++.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++...... ..
T Consensus 81 ~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~--~~ 151 (323)
T cd05595 81 ELFFHLSR----ERVFTEERARFYGAEIVSALEYLHSRD---VVYRDIKLENLMLDKDGHIKITDFGLCKEGISDG--AT 151 (323)
T ss_pred cHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEEcCCCCEEecccHHhccccCCC--Cc
Confidence 99988852 346899999999999999999999998 9999999999999999999999999987532211 11
Q ss_pred ccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCCC
Q 003605 571 STRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGND 650 (808)
Q Consensus 571 ~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~~ 650 (808)
.....||..|+|||++.+..++.++|||||||++|||++|+.||..... ..+... +.... ..
T Consensus 152 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~---~~~~~~-------------~~~~~--~~ 213 (323)
T cd05595 152 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---ERLFEL-------------ILMEE--IR 213 (323)
T ss_pred cccccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCH---HHHHHH-------------HhcCC--CC
Confidence 2235689999999999999999999999999999999999999964321 111110 00000 01
Q ss_pred CChhhHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 003605 651 VPFDSVAKVAAIASMCVQPEVQHRP-----FMGEVVQA 683 (808)
Q Consensus 651 ~~~~~~~~l~~Li~~Cl~~dP~~RP-----sm~eVl~~ 683 (808)
++......+.+++.+||+.||++|+ ++.++++.
T Consensus 214 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~h 251 (323)
T cd05595 214 FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 251 (323)
T ss_pred CCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHcC
Confidence 2233446788999999999999998 78888754
No 82
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=2.1e-37 Score=328.85 Aligned_cols=260 Identities=27% Similarity=0.432 Sum_probs=205.3
Q ss_pred hCCcceeeeeeecCcEEEEEEEee-CCC----EEEEEEeecc-cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceE
Q 003605 408 TGNFDASRILGEGGFGLVYSGVLD-DGT----KVAVKVLKRV-DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARC 481 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l~-dg~----~VAVK~lk~~-~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~ 481 (808)
.++|+..++||+|+||+||+|... +++ .||+|+++.. .....+++.+|+.++..++|+||++++++|.. ...+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~ 84 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLT-STVQ 84 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-CCcE
Confidence 356888899999999999999853 454 4899998753 33446788999999999999999999999976 4568
Q ss_pred EEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccc
Q 003605 482 LVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARS 561 (808)
Q Consensus 482 LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~ 561 (808)
+++||+++|+|.++++.. ...+++.+++.++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++.
T Consensus 85 l~~~~~~~g~l~~~l~~~---~~~~~~~~~~~~~~qi~~~L~~lH~~~---iiH~dlkp~Nil~~~~~~~kL~dfG~~~~ 158 (279)
T cd05109 85 LVTQLMPYGCLLDYVREN---KDRIGSQDLLNWCVQIAKGMSYLEEVR---LVHRDLAARNVLVKSPNHVKITDFGLARL 158 (279)
T ss_pred EEEEcCCCCCHHHHHhhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEEcCCCcEEECCCCceee
Confidence 999999999999999642 346899999999999999999999988 99999999999999999999999999986
Q ss_pred cccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhcccccccc
Q 003605 562 AMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLE 640 (808)
Q Consensus 562 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~ 640 (808)
..............++..|+|||.+.+..++.++|||||||++|||++ |..||+... ...+..+.... .
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~---~~~~~~~~~~~----~--- 228 (279)
T cd05109 159 LDIDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIP---AREIPDLLEKG----E--- 228 (279)
T ss_pred cccccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCC---HHHHHHHHHCC----C---
Confidence 543222111122234678999999999999999999999999999998 899986432 12222222110 0
Q ss_pred cccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHhh
Q 003605 641 RIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLVCNEC 691 (808)
Q Consensus 641 ~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~~~~ 691 (808)
....+......+.+++.+||+.||++||++.|+++.|+.+....
T Consensus 229 -------~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 229 -------RLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred -------cCCCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 00112234467889999999999999999999999998775543
No 83
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-39 Score=350.78 Aligned_cols=267 Identities=23% Similarity=0.293 Sum_probs=206.9
Q ss_pred HhCCcceeeeeeecCcEEEEEEE-eeCCCEEEEEEeecccch-hhHHHHHHHHHHhhcc-cccceeEEeeeeecc-ceEE
Q 003605 407 ATGNFDASRILGEGGFGLVYSGV-LDDGTKVAVKVLKRVDQQ-GGREFLAEVEMLSRLH-HRNLVKLIGICIEEQ-ARCL 482 (808)
Q Consensus 407 at~~f~~~~~LG~G~fG~VYkg~-l~dg~~VAVK~lk~~~~~-~~~~f~~Ei~iL~~L~-HpNIV~L~g~~~~~~-~~~L 482 (808)
..++|...+.||.|.||.||+|+ ..+|+.||||++++.-.. .+.-=++|++.|++|+ |+|||+|.+++.+.+ .+++
T Consensus 8 ~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~f 87 (538)
T KOG0661|consen 8 FMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILYF 87 (538)
T ss_pred HHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEee
Confidence 44678889999999999999998 458899999999853222 2223468999999998 999999999999887 8999
Q ss_pred EEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccc
Q 003605 483 VYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSA 562 (808)
Q Consensus 483 V~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~ 562 (808)
|||||+ .+|.+++++. +..+++.++..|+.||++||+|+|.+| +.|||+||+|||+..+..+||+||||||..
T Consensus 88 VfE~Md-~NLYqLmK~R---~r~fse~~irnim~QilqGL~hiHk~G---fFHRDlKPENiLi~~~~~iKiaDFGLARev 160 (538)
T KOG0661|consen 88 VFEFMD-CNLYQLMKDR---NRLFSESDIRNIMYQILQGLAHIHKHG---FFHRDLKPENILISGNDVIKIADFGLAREV 160 (538)
T ss_pred eHHhhh-hhHHHHHhhc---CCcCCHHHHHHHHHHHHHHHHHHHhcC---cccccCChhheEecccceeEeccccccccc
Confidence 999995 6999999743 568999999999999999999999999 999999999999998999999999999976
Q ss_pred ccccccccccccccccccccchhhh-cCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhh-----hhcccc
Q 003605 563 MDEESRHISTRVMGTFGYVAPEYAM-TGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWAR-----PLLTSR 636 (808)
Q Consensus 563 ~~~~~~~~~~~~~Gt~~Y~APE~l~-~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~-----~~~~~~ 636 (808)
.. ..-.+..+.|.+|+|||++. .+.|+.+.|+|++|||++||.+-+.-|-...+-++..-+--+. ..+.+.
T Consensus 161 ~S---kpPYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~eg 237 (538)
T KOG0661|consen 161 RS---KPPYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWPEG 237 (538)
T ss_pred cc---CCCcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccchhH
Confidence 43 33446678899999999875 5778999999999999999999888886544332211111110 000000
Q ss_pred cccccccCCCC-------CCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 637 EGLERIIDPSL-------GNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 637 ~~l~~ivD~~l-------~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
..+...+.=.+ ....-.....+.++++.+|+.+||++|||+.|.+++
T Consensus 238 ~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 238 YNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred HHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 11111111111 011112367789999999999999999999999876
No 84
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=1.6e-37 Score=338.37 Aligned_cols=262 Identities=24% Similarity=0.383 Sum_probs=196.5
Q ss_pred CcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc--cchhhHHHHHHHHHHhhcccccceeEEeeeeec-----cceE
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV--DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEE-----QARC 481 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~--~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~-----~~~~ 481 (808)
+|++.++||+|+||.||+|+.. +++.||||+++.. ......++.+|++++++++|+||+++++++... ...+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 5888999999999999999965 7899999998742 233445789999999999999999999988643 2479
Q ss_pred EEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccc
Q 003605 482 LVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARS 561 (808)
Q Consensus 482 LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~ 561 (808)
+||||+. ++|.+++.. ...+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 81 lv~e~~~-~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~~~~kL~Dfg~~~~ 152 (338)
T cd07859 81 VVFELME-SDLHQVIKA----NDDLTPEHHQFFLYQLLRALKYIHTAN---VFHRDLKPKNILANADCKLKICDFGLARV 152 (338)
T ss_pred EEEecCC-CCHHHHHHh----cccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEccCccccc
Confidence 9999995 689888852 335899999999999999999999998 99999999999999999999999999975
Q ss_pred cccccc-cccccccccccccccchhhhc--CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcc----
Q 003605 562 AMDEES-RHISTRVMGTFGYVAPEYAMT--GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLT---- 634 (808)
Q Consensus 562 ~~~~~~-~~~~~~~~Gt~~Y~APE~l~~--~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~---- 634 (808)
...... ........||..|+|||++.+ ..++.++|||||||++|||+||+.||........ ..+......
T Consensus 153 ~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~---~~~~~~~~~~~~~ 229 (338)
T cd07859 153 AFNDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQ---LDLITDLLGTPSP 229 (338)
T ss_pred cccccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHH---HHHHHHHhCCCCH
Confidence 432221 112234568999999999875 6789999999999999999999999964332110 010000000
Q ss_pred -------c---ccccccccCC---CCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 635 -------S---REGLERIIDP---SLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 635 -------~---~~~l~~ivD~---~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
. .+.+..+... .+...+ ......+.+++.+||+.+|++||+++|+++.
T Consensus 230 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 230 ETISRVRNEKARRYLSSMRKKQPVPFSQKF-PNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred HHHHHhhhhhHHHHHHhhcccCCCchHHhc-CCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0 0000000000 000000 1123567899999999999999999999865
No 85
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=6.3e-38 Score=321.68 Aligned_cols=264 Identities=25% Similarity=0.332 Sum_probs=204.8
Q ss_pred CCcceeeeeeecCcEEEEEEEe-eCCCEEEEEEeecccc--hhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEe
Q 003605 409 GNFDASRILGEGGFGLVYSGVL-DDGTKVAVKVLKRVDQ--QGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYE 485 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l-~dg~~VAVK~lk~~~~--~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~E 485 (808)
++|...++||+|.||.||+|+. .+|+.||||+++-.+. .......+||+.|+.++|+||+.|+++|.+.+...||+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 4677788999999999999995 4899999999985322 224567899999999999999999999999999999999
Q ss_pred ecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccc
Q 003605 486 LIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDE 565 (808)
Q Consensus 486 y~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~ 565 (808)
||+. +|+..++ .....+.-.++..++.++++||+|||.+. |+||||||.|+|+++++.+||+|||+|+.+...
T Consensus 82 fm~t-dLe~vIk---d~~i~l~pa~iK~y~~m~LkGl~y~H~~~---IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p 154 (318)
T KOG0659|consen 82 FMPT-DLEVVIK---DKNIILSPADIKSYMLMTLKGLAYCHSKW---ILHRDLKPNNLLISSDGQLKIADFGLARFFGSP 154 (318)
T ss_pred eccc-cHHHHhc---ccccccCHHHHHHHHHHHHHHHHHHHhhh---hhcccCCccceEEcCCCcEEeecccchhccCCC
Confidence 9964 9999996 34567889999999999999999999998 999999999999999999999999999987654
Q ss_pred cccccccccccccccccchhhhc-CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcc----cccccc
Q 003605 566 ESRHISTRVMGTFGYVAPEYAMT-GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLT----SREGLE 640 (808)
Q Consensus 566 ~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~----~~~~l~ 640 (808)
+. ..+..+-|.+|+|||.+.+ +.|+...|+||.|||+.||+-|..-|....+-+ ++..-.+.+-+ +...+.
T Consensus 155 ~~--~~~~~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDid--QL~~If~~LGTP~~~~WP~~~ 230 (318)
T KOG0659|consen 155 NR--IQTHQVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDID--QLSKIFRALGTPTPDQWPEMT 230 (318)
T ss_pred Cc--ccccceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHH--HHHHHHHHcCCCCcccCcccc
Confidence 33 2334478999999999886 578999999999999999999877665433222 22211111100 011111
Q ss_pred cccC--------CCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 641 RIID--------PSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 641 ~ivD--------~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
++-| ....+..-..+.....+++..++..||.+|.++.|.+++
T Consensus 231 ~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 231 SLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred ccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 1111 111111223445667999999999999999999998764
No 86
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=1.5e-37 Score=332.81 Aligned_cols=265 Identities=22% Similarity=0.294 Sum_probs=199.6
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc-chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEee
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD-QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~-~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
++|.+.+.||+|+||+||+|... +++.||+|+++... ......+.+|++++++++|+||+++++++.+++..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 56889999999999999999865 68899999987432 23345788999999999999999999999998999999999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEE 566 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~ 566 (808)
+. |+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++......
T Consensus 85 ~~-~~l~~~l~~---~~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~ 157 (288)
T cd07871 85 LD-SDLKQYLDN---CGNLMSMHNVKIFMFQLLRGLSYCHKRK---ILHRDLKPQNLLINEKGELKLADFGLARAKSVPT 157 (288)
T ss_pred CC-cCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEECcCcceeeccCCC
Confidence 97 589988853 2335789999999999999999999988 9999999999999999999999999987543221
Q ss_pred ccccccccccccccccchhhhc-CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhh--------hhhccccc
Q 003605 567 SRHISTRVMGTFGYVAPEYAMT-GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWA--------RPLLTSRE 637 (808)
Q Consensus 567 ~~~~~~~~~Gt~~Y~APE~l~~-~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~--------~~~~~~~~ 637 (808)
.......++..|+|||++.+ ..++.++|||||||++|||+||+.||............... ++.....+
T Consensus 158 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (288)
T cd07871 158 --KTYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWPGITSNE 235 (288)
T ss_pred --ccccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhhccccch
Confidence 11233467899999998865 56899999999999999999999999654321111100000 00000011
Q ss_pred ccccccCCCCCCC----CChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 638 GLERIIDPSLGND----VPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 638 ~l~~ivD~~l~~~----~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
.......+..... .......++.+++.+||+.||++|||++|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 236 EFRSYLFPQYRAQPLINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred hhhccccCccCCCchHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 1111111111000 01122356789999999999999999999975
No 87
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=2.3e-37 Score=330.71 Aligned_cols=265 Identities=26% Similarity=0.446 Sum_probs=207.2
Q ss_pred hCCcceeeeeeecCcEEEEEEEeeC-----------------CCEEEEEEeeccc-chhhHHHHHHHHHHhhccccccee
Q 003605 408 TGNFDASRILGEGGFGLVYSGVLDD-----------------GTKVAVKVLKRVD-QQGGREFLAEVEMLSRLHHRNLVK 469 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l~d-----------------g~~VAVK~lk~~~-~~~~~~f~~Ei~iL~~L~HpNIV~ 469 (808)
.++|++.+.||+|+||.||++...+ +..||+|.+.... ....++|.+|++++++++|+||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 4578889999999999999998642 2458999987532 345678999999999999999999
Q ss_pred EEeeeeeccceEEEEeecCCCCcccccccccc-------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccC
Q 003605 470 LIGICIEEQARCLVYELIPNGSVESHLHGVDK-------ESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSN 542 (808)
Q Consensus 470 L~g~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~-------~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsN 542 (808)
++++|..++..++++||+.+++|.++++.... ....+++..++.++.|++.||+|||+.+ |+||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~---i~H~dlkp~N 160 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLN---FVHRDLATRN 160 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcC---ccccccchhc
Confidence 99999999999999999999999999965331 1236899999999999999999999988 9999999999
Q ss_pred eeecCCCcceecccccccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh--CCCCCCCCCCC
Q 003605 543 ILLEHDFTPKVSDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS--GRKPVDMTQPP 620 (808)
Q Consensus 543 ILLd~~~~vKL~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT--G~~P~~~~~~~ 620 (808)
|+++.++.++|+|||+++...............++..|+|||++....++.++|||||||++|||++ |..||....
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~-- 238 (296)
T cd05051 161 CLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLT-- 238 (296)
T ss_pred eeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcC--
Confidence 9999999999999999976543333333334556789999999998899999999999999999998 667775322
Q ss_pred CcchhHHhhhhhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 003605 621 GQENLVAWARPLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALK 685 (808)
Q Consensus 621 ~~~~lv~w~~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le 685 (808)
......++........ .......+.....++.+++.+|++.+|++||++.||++.|+
T Consensus 239 -~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 239 -DQQVIENAGHFFRDDG-------RQIYLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred -hHHHHHHHHhcccccc-------ccccCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 1222222211111000 00001112233467999999999999999999999999886
No 88
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=1.3e-37 Score=333.86 Aligned_cols=264 Identities=23% Similarity=0.440 Sum_probs=203.1
Q ss_pred CCcceeeeeeecCcEEEEEEEeeC---------------CCEEEEEEeecc-cchhhHHHHHHHHHHhhcccccceeEEe
Q 003605 409 GNFDASRILGEGGFGLVYSGVLDD---------------GTKVAVKVLKRV-DQQGGREFLAEVEMLSRLHHRNLVKLIG 472 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~d---------------g~~VAVK~lk~~-~~~~~~~f~~Ei~iL~~L~HpNIV~L~g 472 (808)
++|++.+.||+|+||.||++...+ ...||||.++.. .....++|.+|++++.+++|+||+++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 578889999999999999987542 135899998753 3344567999999999999999999999
Q ss_pred eeeeccceEEEEeecCCCCcccccccccc--------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCee
Q 003605 473 ICIEEQARCLVYELIPNGSVESHLHGVDK--------ESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNIL 544 (808)
Q Consensus 473 ~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~--------~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNIL 544 (808)
++...+..++||||+.+++|.++++.... ....++|..+++++.|++.||+|||+.+ ++||||||+|||
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~---i~H~dlkp~Nil 161 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLN---FVHRDLATRNCL 161 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcC---eeccccChhhEE
Confidence 99999999999999999999999864221 1124789999999999999999999988 999999999999
Q ss_pred ecCCCcceecccccccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh--CCCCCCCCCCCCc
Q 003605 545 LEHDFTPKVSDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS--GRKPVDMTQPPGQ 622 (808)
Q Consensus 545 Ld~~~~vKL~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT--G~~P~~~~~~~~~ 622 (808)
+++++.+||+|||+++...............++..|+|||++..+.++.++|||||||++|||++ |..||.....
T Consensus 162 l~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~--- 238 (295)
T cd05097 162 VGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSD--- 238 (295)
T ss_pred EcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccCh---
Confidence 99999999999999976543322222233445778999999999999999999999999999998 5566654321
Q ss_pred chhHHhhhhhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 003605 623 ENLVAWARPLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALK 685 (808)
Q Consensus 623 ~~lv~w~~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le 685 (808)
............... .......+......+.+|+.+|++.+|++||+|.+|++.|+
T Consensus 239 ~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 239 EQVIENTGEFFRNQG-------RQIYLSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred HHHHHHHHHhhhhcc-------ccccCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 111111111110000 00001111223468999999999999999999999999886
No 89
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=2.8e-38 Score=348.96 Aligned_cols=247 Identities=26% Similarity=0.396 Sum_probs=211.2
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc--cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEe
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV--DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYE 485 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~--~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~E 485 (808)
++|.+.+.||+|.||.||||+-+ +.+.||+|.+.+. .+...+.+.+|++|+++|+|||||.++++|+...+.++|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 57888899999999999999965 6889999999653 34456679999999999999999999999999999999999
Q ss_pred ecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccc
Q 003605 486 LIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDE 565 (808)
Q Consensus 486 y~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~ 565 (808)
|+.+ +|..+|.+ ...|.++....|+.++..||.|||+++ |+|||+||.||||+.++.+|+||||+|+...
T Consensus 82 ~a~g-~L~~il~~----d~~lpEe~v~~~a~~LVsaL~yLhs~r---ilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~-- 151 (808)
T KOG0597|consen 82 YAVG-DLFTILEQ----DGKLPEEQVRAIAYDLVSALYYLHSNR---ILHRDMKPQNILLEKGGTLKLCDFGLARAMS-- 151 (808)
T ss_pred hhhh-hHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHhcC---cccccCCcceeeecCCCceeechhhhhhhcc--
Confidence 9965 99999953 346999999999999999999999998 9999999999999999999999999999654
Q ss_pred cccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCC
Q 003605 566 ESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDP 645 (808)
Q Consensus 566 ~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~ 645 (808)
....+.+.+.||+.|||||.+.++.|+..+|.||+|||||||++|+.||.. ..+...++.+..+ +
T Consensus 152 ~~t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a------~si~~Lv~~I~~d---------~ 216 (808)
T KOG0597|consen 152 TNTSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYA------RSITQLVKSILKD---------P 216 (808)
T ss_pred cCceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchH------HHHHHHHHHHhcC---------C
Confidence 345666788999999999999999999999999999999999999999953 2222333222221 1
Q ss_pred CCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 646 SLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 646 ~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
. .++......+..++...|.+||.+|.+..+++..
T Consensus 217 v---~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~H 251 (808)
T KOG0597|consen 217 V---KPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLGH 251 (808)
T ss_pred C---CCcccccHHHHHHHHHHhhcChhhcccHHHHhcC
Confidence 1 1344667889999999999999999999999865
No 90
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=3.2e-37 Score=337.70 Aligned_cols=242 Identities=26% Similarity=0.346 Sum_probs=197.1
Q ss_pred eeeeecCcEEEEEEEee-CCCEEEEEEeecc---cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecCCC
Q 003605 415 RILGEGGFGLVYSGVLD-DGTKVAVKVLKRV---DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIPNG 490 (808)
Q Consensus 415 ~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~---~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~~G 490 (808)
++||+|+||.||++... +++.||||+++.. ......++.+|+++++.++|+||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999865 7899999999753 2344567889999999999999999999999999999999999999
Q ss_pred CccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccccccc
Q 003605 491 SVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRHI 570 (808)
Q Consensus 491 sL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~~ 570 (808)
+|.+++.. ...+++.++..++.|++.||+|||+++ |+||||||+||||+.++.+||+|||+++...... ..
T Consensus 81 ~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~--~~ 151 (328)
T cd05593 81 ELFFHLSR----ERVFSEDRTRFYGAEIVSALDYLHSGK---IVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA--AT 151 (328)
T ss_pred CHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecccCHHHeEECCCCcEEEecCcCCccCCCcc--cc
Confidence 99988852 346899999999999999999999998 9999999999999999999999999987532211 11
Q ss_pred ccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCCC
Q 003605 571 STRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGND 650 (808)
Q Consensus 571 ~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~~ 650 (808)
.....||..|+|||++.+..++.++|||||||+||||++|+.||..... .. ........ + ..
T Consensus 152 ~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~---~~---~~~~~~~~--------~----~~ 213 (328)
T cd05593 152 MKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---EK---LFELILME--------D----IK 213 (328)
T ss_pred cccccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCH---HH---HHHHhccC--------C----cc
Confidence 2345689999999999999999999999999999999999999964321 11 11111100 0 01
Q ss_pred CChhhHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 003605 651 VPFDSVAKVAAIASMCVQPEVQHRP-----FMGEVVQA 683 (808)
Q Consensus 651 ~~~~~~~~l~~Li~~Cl~~dP~~RP-----sm~eVl~~ 683 (808)
++......+.+++.+||+.||++|+ ++.|+++.
T Consensus 214 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 214 FPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred CCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 2233446788999999999999997 88888764
No 91
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=1.2e-37 Score=360.27 Aligned_cols=261 Identities=24% Similarity=0.302 Sum_probs=209.4
Q ss_pred HHHHHhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc--cchhhHHHHHHHHHHhhcccccceeEEeeeeecc-
Q 003605 403 EIEKATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV--DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQ- 478 (808)
Q Consensus 403 el~~at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~--~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~- 478 (808)
++....++|.+.++||+|+||+||+|... +|+.||||+++.. .......+.+|+.++..++|+||+++.+.+...+
T Consensus 26 ~~~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~ 105 (496)
T PTZ00283 26 TAKEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDP 105 (496)
T ss_pred cccccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccc
Confidence 34445679999999999999999999854 7899999998642 3445567889999999999999999988765432
Q ss_pred -------ceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcc
Q 003605 479 -------ARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTP 551 (808)
Q Consensus 479 -------~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~v 551 (808)
..++||||+++|+|.++|+........+++..+..|+.|++.||+|||+.+ |+||||||+||||+.++.+
T Consensus 106 ~~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~---IiHrDLKP~NILl~~~~~v 182 (496)
T PTZ00283 106 RNPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKH---MIHRDIKSANILLCSNGLV 182 (496)
T ss_pred cCcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEeCCCCE
Confidence 358999999999999999754444557899999999999999999999988 9999999999999999999
Q ss_pred eecccccccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhh
Q 003605 552 KVSDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARP 631 (808)
Q Consensus 552 KL~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~ 631 (808)
||+|||+++...............||..|+|||++.+..++.++|||||||+||||++|+.||.... .......
T Consensus 183 kL~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~------~~~~~~~ 256 (496)
T PTZ00283 183 KLGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGEN------MEEVMHK 256 (496)
T ss_pred EEEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC------HHHHHHH
Confidence 9999999986543322233345679999999999999999999999999999999999999996422 1111111
Q ss_pred hcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 632 LLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 632 ~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
.... .. ...+......+.+++.+||+.+|++||++.++++.
T Consensus 257 ~~~~------~~-----~~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 257 TLAG------RY-----DPLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred HhcC------CC-----CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 1110 00 11223345679999999999999999999999864
No 92
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=2e-37 Score=334.82 Aligned_cols=259 Identities=26% Similarity=0.419 Sum_probs=205.9
Q ss_pred hCCcceeeeeeecCcEEEEEEEee------CCCEEEEEEeeccc-chhhHHHHHHHHHHhhc-ccccceeEEeeeeeccc
Q 003605 408 TGNFDASRILGEGGFGLVYSGVLD------DGTKVAVKVLKRVD-QQGGREFLAEVEMLSRL-HHRNLVKLIGICIEEQA 479 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l~------dg~~VAVK~lk~~~-~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~~~~~~~ 479 (808)
.++|.+.+.||+|+||.||++... ++..||||+++... ....+.+.+|+++++++ +|+||+++++++...+.
T Consensus 34 ~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~ 113 (302)
T cd05055 34 RNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGGP 113 (302)
T ss_pred HHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCCc
Confidence 356889999999999999999742 34579999987543 33456799999999999 79999999999999999
Q ss_pred eEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccc
Q 003605 480 RCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLA 559 (808)
Q Consensus 480 ~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa 559 (808)
.++||||+.+|+|.++++... ...+++.+++.++.+++.||+|||+.+ |+|+||||+|||++.++.+||+|||++
T Consensus 114 ~~lv~e~~~~~~L~~~i~~~~--~~~l~~~~~~~i~~~i~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~dfg~~ 188 (302)
T cd05055 114 ILVITEYCCYGDLLNFLRRKR--ESFLTLEDLLSFSYQVAKGMAFLASKN---CIHRDLAARNVLLTHGKIVKICDFGLA 188 (302)
T ss_pred eEEEEEcCCCCcHHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eehhhhccceEEEcCCCeEEECCCccc
Confidence 999999999999999996422 234899999999999999999999988 999999999999999999999999999
Q ss_pred cccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhcccccc
Q 003605 560 RSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREG 638 (808)
Q Consensus 560 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~ 638 (808)
+...............++..|+|||++....++.++|||||||++|||++ |..||...... .......
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~--~~~~~~~--------- 257 (302)
T cd05055 189 RDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVD--SKFYKLI--------- 257 (302)
T ss_pred ccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCch--HHHHHHH---------
Confidence 86543222112222345678999999999999999999999999999998 99998643221 1111111
Q ss_pred cccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 003605 639 LERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLV 687 (808)
Q Consensus 639 l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i 687 (808)
+.......+.....++.+++.+|++.+|++||++.||++.|+++
T Consensus 258 -----~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 258 -----KEGYRMAQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred -----HcCCcCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 11111111222346799999999999999999999999999864
No 93
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=2e-37 Score=339.91 Aligned_cols=266 Identities=21% Similarity=0.347 Sum_probs=203.1
Q ss_pred hCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc-cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEe
Q 003605 408 TGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV-DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYE 485 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~-~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~E 485 (808)
.++|++.+.||+|+||.||++... +++.+|+|.++.. .....+++.+|++++++++|+||++++++|.+.+..++|||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 478999999999999999999976 6888999988753 33445679999999999999999999999999999999999
Q ss_pred ecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccc
Q 003605 486 LIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDE 565 (808)
Q Consensus 486 y~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~ 565 (808)
|+++|+|.++++. ...+++.....++.+++.||+|||+.+ .|+||||||+|||+++++.+||+|||++......
T Consensus 84 ~~~~~~L~~~l~~----~~~~~~~~~~~~~~~l~~~l~~lH~~~--~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~ 157 (333)
T cd06650 84 HMDGGSLDQVLKK----AGRIPEQILGKVSIAVIKGLTYLREKH--KIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 157 (333)
T ss_pred cCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhcC--CEEecCCChhhEEEcCCCCEEEeeCCcchhhhhh
Confidence 9999999999953 235889999999999999999999742 3999999999999999999999999998754321
Q ss_pred cccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHH------hhhhhcccc---
Q 003605 566 ESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVA------WARPLLTSR--- 636 (808)
Q Consensus 566 ~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~------w~~~~~~~~--- 636 (808)
......|+..|+|||++.+..++.++|||||||++|||++|+.||............. +........
T Consensus 158 ----~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (333)
T cd06650 158 ----MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPPPDAKELELMFGCPVEGDPAESETSPRPRP 233 (333)
T ss_pred ----ccccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcchhHHHHHhcCcccCCccccccCcccCC
Confidence 1223468899999999998889999999999999999999999997533211100000 000000000
Q ss_pred ---------------cccccccCCCCCC---CC-ChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 637 ---------------EGLERIIDPSLGN---DV-PFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 637 ---------------~~l~~ivD~~l~~---~~-~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
.....+.+..... .. ......++.+|+.+||+.||++||++.|+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~P~~Rpt~~ell~h 299 (333)
T cd06650 234 PGRPLSSYGPDSRPPMAIFELLDYIVNEPPPKLPSGVFGAEFQDFVNKCLIKNPAERADLKQLMVH 299 (333)
T ss_pred ccchhhhhcccccccccHHHHHHHHhcCCCccCCCCCcCHHHHHHHHHhccCCcccCcCHHHHhhC
Confidence 0000000000000 00 01134568899999999999999999999765
No 94
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=1.9e-37 Score=325.10 Aligned_cols=250 Identities=28% Similarity=0.444 Sum_probs=201.2
Q ss_pred CcceeeeeeecCcEEEEEEEeeCCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecCC
Q 003605 410 NFDASRILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIPN 489 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~~ 489 (808)
+|++.+.||+|+||.||+|...++..+|+|.++... ....+|.+|++++++++|+||+++++++...+..++||||+++
T Consensus 5 ~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~ 83 (256)
T cd05059 5 ELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGA-MSEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMAN 83 (256)
T ss_pred HcchhhhhccCCCceEEEeEecCCccEEEEEeccCC-CCHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCCC
Confidence 467788999999999999998777789999986432 2345789999999999999999999999999999999999999
Q ss_pred CCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccccc
Q 003605 490 GSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRH 569 (808)
Q Consensus 490 GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~ 569 (808)
++|.++++.. ...++|..++.|+.|++.||+|||+.+ ++||||||+||++++++.+||+|||+++...+... .
T Consensus 84 ~~L~~~l~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~-~ 156 (256)
T cd05059 84 GCLLNYLRER---KGKLGTEWLLDMCSDVCEAMEYLESNG---FIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQY-T 156 (256)
T ss_pred CCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHHCC---cccccccHhhEEECCCCcEEECCcccceecccccc-c
Confidence 9999999632 236899999999999999999999998 99999999999999999999999999876533211 1
Q ss_pred cccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCC
Q 003605 570 ISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLG 648 (808)
Q Consensus 570 ~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~ 648 (808)
......++..|+|||++.+..++.++||||||+++|||++ |+.||+.... ........ ....
T Consensus 157 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---~~~~~~~~--------------~~~~ 219 (256)
T cd05059 157 SSQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSN---SEVVESVS--------------AGYR 219 (256)
T ss_pred ccCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCH---HHHHHHHH--------------cCCc
Confidence 1111223457999999998999999999999999999999 8888864321 11111110 0011
Q ss_pred CCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 003605 649 NDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQAL 684 (808)
Q Consensus 649 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~L 684 (808)
...+......+.+++.+||..+|++||++.||++.|
T Consensus 220 ~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 220 LYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 112223456899999999999999999999999876
No 95
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=1.6e-37 Score=331.95 Aligned_cols=262 Identities=28% Similarity=0.477 Sum_probs=206.3
Q ss_pred HHhCCcceeeeeeecCcEEEEEEEee------CCCEEEEEEeeccc-chhhHHHHHHHHHHhhcccccceeEEeeeeecc
Q 003605 406 KATGNFDASRILGEGGFGLVYSGVLD------DGTKVAVKVLKRVD-QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQ 478 (808)
Q Consensus 406 ~at~~f~~~~~LG~G~fG~VYkg~l~------dg~~VAVK~lk~~~-~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~ 478 (808)
...++|++.+.||+|+||.||+|... .+..||+|.++... .....++.+|+.++++++|+||+++++++.+.+
T Consensus 3 ~~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~ 82 (288)
T cd05061 3 VSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQ 82 (288)
T ss_pred ccHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCC
Confidence 35678999999999999999999754 24579999886433 233457889999999999999999999999889
Q ss_pred ceEEEEeecCCCCcccccccccc------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcce
Q 003605 479 ARCLVYELIPNGSVESHLHGVDK------ESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPK 552 (808)
Q Consensus 479 ~~~LV~Ey~~~GsL~~~L~~~~~------~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vK 552 (808)
..++||||+++|+|.++++.... ....+++..+++++.|++.||+|||+++ |+||||||+|||+++++.+|
T Consensus 83 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dikp~nili~~~~~~~ 159 (288)
T cd05061 83 PTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKK---FVHRDLAARNCMVAHDFTVK 159 (288)
T ss_pred CcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---CcCCCCChheEEEcCCCcEE
Confidence 99999999999999999964321 1235678889999999999999999988 99999999999999999999
Q ss_pred ecccccccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhh
Q 003605 553 VSDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARP 631 (808)
Q Consensus 553 L~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~ 631 (808)
|+|||+++...............++..|+|||.+.++.++.++|||||||++|||++ |..||..... .......
T Consensus 160 L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~---~~~~~~~-- 234 (288)
T cd05061 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSN---EQVLKFV-- 234 (288)
T ss_pred ECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHH--
Confidence 999999986543222222223345678999999999999999999999999999999 7888854221 1111111
Q ss_pred hcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 003605 632 LLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLV 687 (808)
Q Consensus 632 ~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i 687 (808)
.+... ...+......+.+++.+|++.+|++||++.++++.|+..
T Consensus 235 -----------~~~~~-~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~ 278 (288)
T cd05061 235 -----------MDGGY-LDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDD 278 (288)
T ss_pred -----------HcCCC-CCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhh
Confidence 11100 011223346899999999999999999999999988865
No 96
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=4e-37 Score=332.31 Aligned_cols=261 Identities=27% Similarity=0.436 Sum_probs=205.4
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCC--EEEEEEeecc-cchhhHHHHHHHHHHhhc-ccccceeEEeeeeeccceEEE
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGT--KVAVKVLKRV-DQQGGREFLAEVEMLSRL-HHRNLVKLIGICIEEQARCLV 483 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~--~VAVK~lk~~-~~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~~~~~~~~~LV 483 (808)
++|++.+.||+|+||.||+|... ++. .+|+|.++.. .....++|.+|++++.++ +|+||+++++++.+++..++|
T Consensus 7 ~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~lv 86 (303)
T cd05088 7 NDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLA 86 (303)
T ss_pred hhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceEE
Confidence 57888999999999999999965 454 4588877653 334556889999999999 899999999999999999999
Q ss_pred EeecCCCCcccccccccc------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcc
Q 003605 484 YELIPNGSVESHLHGVDK------------ESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTP 551 (808)
Q Consensus 484 ~Ey~~~GsL~~~L~~~~~------------~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~v 551 (808)
+||+++|+|.++++.... ....+++.+++.++.|++.||+|||+.+ |+||||||+|||+++++.+
T Consensus 87 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dlkp~Nili~~~~~~ 163 (303)
T cd05088 87 IEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVA 163 (303)
T ss_pred EEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCC---ccccccchheEEecCCCcE
Confidence 999999999999964321 1235899999999999999999999988 9999999999999999999
Q ss_pred eecccccccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhh
Q 003605 552 KVSDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWAR 630 (808)
Q Consensus 552 KL~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~ 630 (808)
||+|||+++..... .......++..|+|||++.+..++.++|||||||+||||+| |..||..... ........
T Consensus 164 kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~---~~~~~~~~ 237 (303)
T cd05088 164 KIADFGLSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC---AELYEKLP 237 (303)
T ss_pred EeCccccCcccchh---hhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCCh---HHHHHHHh
Confidence 99999998632110 11111224567999999988889999999999999999998 9999864321 11111110
Q ss_pred hhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHhhh
Q 003605 631 PLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLVCNECD 692 (808)
Q Consensus 631 ~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~~~~~ 692 (808)
.......+......+.+++.+|++.+|++||++.++++.|+.+.++..
T Consensus 238 --------------~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~~~ 285 (303)
T cd05088 238 --------------QGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEERK 285 (303)
T ss_pred --------------cCCcCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhhh
Confidence 000111122234578999999999999999999999999998876654
No 97
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=2.3e-37 Score=342.31 Aligned_cols=253 Identities=23% Similarity=0.309 Sum_probs=199.1
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc---cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEE
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV---DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVY 484 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~---~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~ 484 (808)
++|++.++||+|+||+||++... +++.||||+++.. .......+.+|++++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 47899999999999999999975 6899999999753 2334456889999999999999999999999999999999
Q ss_pred eecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccc
Q 003605 485 ELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMD 564 (808)
Q Consensus 485 Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~ 564 (808)
||+++|+|.++++. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 81 E~~~~g~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~lH~~~---ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~ 153 (364)
T cd05599 81 EYLPGGDMMTLLMK----KDTFTEEETRFYIAETILAIDSIHKLG---YIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKK 153 (364)
T ss_pred CCCCCcHHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEeecccceeccc
Confidence 99999999999863 235899999999999999999999998 99999999999999999999999999875422
Q ss_pred cccc------------------------------------ccccccccccccccchhhhcCCCccccceeeHHHHHHHHH
Q 003605 565 EESR------------------------------------HISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELL 608 (808)
Q Consensus 565 ~~~~------------------------------------~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELl 608 (808)
.... .......||+.|+|||++....++.++|||||||++|||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~ 233 (364)
T cd05599 154 SHRTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEML 233 (364)
T ss_pred cccccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhh
Confidence 1100 0011246899999999999999999999999999999999
Q ss_pred hCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCC---HHHHHHH
Q 003605 609 SGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPF---MGEVVQA 683 (808)
Q Consensus 609 TG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs---m~eVl~~ 683 (808)
+|+.||...... ..... ....... +...........+.+++.+|+. +|.+|++ +.|+++.
T Consensus 234 ~G~~Pf~~~~~~---~~~~~---i~~~~~~--------~~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~h 296 (364)
T cd05599 234 VGYPPFCSDNPQ---ETYRK---IINWKET--------LQFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKSH 296 (364)
T ss_pred cCCCCCCCCCHH---HHHHH---HHcCCCc--------cCCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhcC
Confidence 999999643221 11111 1100000 0000011224567888999996 8999998 8888664
No 98
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=2.2e-37 Score=329.71 Aligned_cols=257 Identities=26% Similarity=0.453 Sum_probs=205.5
Q ss_pred CCcceeeeeeecCcEEEEEEEee------CCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEE
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD------DGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCL 482 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~------dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~L 482 (808)
.+|...+.||+|+||.||++... ++..+|+|.++.......++|.+|++++++++|+||+++++++.+.+..++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 46777899999999999999742 456899999887666667889999999999999999999999999999999
Q ss_pred EEeecCCCCcccccccccc-----------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcc
Q 003605 483 VYELIPNGSVESHLHGVDK-----------ESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTP 551 (808)
Q Consensus 483 V~Ey~~~GsL~~~L~~~~~-----------~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~v 551 (808)
++||+++|+|.++++.... ....++|.+++.++.|++.||+|||+.+ ++||||||+|||+++++.+
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~---i~H~dlkp~nil~~~~~~~ 161 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLH---FVHRDLATRNCLVGQGLVV 161 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCC---eecccccHhhEEEcCCCCE
Confidence 9999999999999864321 1135899999999999999999999988 9999999999999999999
Q ss_pred eecccccccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhh
Q 003605 552 KVSDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWAR 630 (808)
Q Consensus 552 KL~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~ 630 (808)
||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |+.||..... .......
T Consensus 162 kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~---~~~~~~~- 237 (280)
T cd05092 162 KIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSN---TEAIECI- 237 (280)
T ss_pred EECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCH---HHHHHHH-
Confidence 9999999875433222122223345678999999999999999999999999999998 8998854321 1111111
Q ss_pred hhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 003605 631 PLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALK 685 (808)
Q Consensus 631 ~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le 685 (808)
.. .. ....+......+.+++.+||+.+|++||++.||++.|+
T Consensus 238 --~~-~~----------~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 238 --TQ-GR----------ELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred --Hc-Cc----------cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 00 00 00111233467889999999999999999999999886
No 99
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=4e-37 Score=336.74 Aligned_cols=264 Identities=25% Similarity=0.400 Sum_probs=208.0
Q ss_pred hCCcceeeeeeecCcEEEEEEEee--------CCCEEEEEEeecc-cchhhHHHHHHHHHHhhc-ccccceeEEeeeeec
Q 003605 408 TGNFDASRILGEGGFGLVYSGVLD--------DGTKVAVKVLKRV-DQQGGREFLAEVEMLSRL-HHRNLVKLIGICIEE 477 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l~--------dg~~VAVK~lk~~-~~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~~~~~ 477 (808)
..+|.+.+.||+|+||.||++... ++..||+|.++.. .....+++.+|++++.++ +|+||++++++|.+.
T Consensus 11 ~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (334)
T cd05100 11 RTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQD 90 (334)
T ss_pred HhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccC
Confidence 356888999999999999999742 1236899988753 334457899999999999 799999999999999
Q ss_pred cceEEEEeecCCCCcccccccccc------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeee
Q 003605 478 QARCLVYELIPNGSVESHLHGVDK------------ESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILL 545 (808)
Q Consensus 478 ~~~~LV~Ey~~~GsL~~~L~~~~~------------~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILL 545 (808)
+..++++||+++|+|.+++..... ....+.|.+++.++.|++.||+|||+.+ |+||||||+|||+
T Consensus 91 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~g---ivH~dlkp~Nill 167 (334)
T cd05100 91 GPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQK---CIHRDLAARNVLV 167 (334)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCC---eeccccccceEEE
Confidence 999999999999999999864221 2235899999999999999999999988 9999999999999
Q ss_pred cCCCcceecccccccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcch
Q 003605 546 EHDFTPKVSDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQEN 624 (808)
Q Consensus 546 d~~~~vKL~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~ 624 (808)
+.++.+||+|||+++...............++..|+|||++.+..++.++|||||||+||||++ |..||....
T Consensus 168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~------ 241 (334)
T cd05100 168 TEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP------ 241 (334)
T ss_pred cCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCC------
Confidence 9999999999999976543222222222334568999999999999999999999999999998 888885322
Q ss_pred hHHhhhhhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHhh
Q 003605 625 LVAWARPLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLVCNEC 691 (808)
Q Consensus 625 lv~w~~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~~~~ 691 (808)
...+...... ......+......+.+++.+|++.+|++||++.|+++.|+.+....
T Consensus 242 ~~~~~~~~~~-----------~~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~ 297 (334)
T cd05100 242 VEELFKLLKE-----------GHRMDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVT 297 (334)
T ss_pred HHHHHHHHHc-----------CCCCCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhc
Confidence 1122111110 0111122334567899999999999999999999999999886543
No 100
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=3e-37 Score=329.16 Aligned_cols=265 Identities=22% Similarity=0.272 Sum_probs=195.0
Q ss_pred CCcceeeeeeecCcEEEEEEEee--CCCEEEEEEeeccc--chhhHHHHHHHHHHhhc---ccccceeEEeeeee-----
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD--DGTKVAVKVLKRVD--QQGGREFLAEVEMLSRL---HHRNLVKLIGICIE----- 476 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~--dg~~VAVK~lk~~~--~~~~~~f~~Ei~iL~~L---~HpNIV~L~g~~~~----- 476 (808)
++|++.+.||+|+||+||+|... +++.||||+++... ......+.+|+++++++ +|+||++++++|..
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 46889999999999999999863 46889999987432 22234667788887766 69999999999852
Q ss_pred ccceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccc
Q 003605 477 EQARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDF 556 (808)
Q Consensus 477 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DF 556 (808)
....++||||+. ++|.+++.... ...+++.+++.|+.|++.||+|||+.+ |+||||||+|||++.++.+||+||
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~i~~qi~~aL~~lH~~~---iiH~dlkp~Nil~~~~~~~kl~Df 154 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVP--EPGVPTETIKDMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADF 154 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEEcCCCCEEEccc
Confidence 356799999995 69999886422 235899999999999999999999998 999999999999999999999999
Q ss_pred ccccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCc-chhHHhhhhhccc
Q 003605 557 GLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQ-ENLVAWARPLLTS 635 (808)
Q Consensus 557 GLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~-~~lv~w~~~~~~~ 635 (808)
|+++..... .......|+..|+|||.+.+..++.++|||||||++|||++|+.||......+. ..+.+........
T Consensus 155 g~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~ 231 (290)
T cd07862 155 GLARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEE 231 (290)
T ss_pred cceEeccCC---cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChh
Confidence 999754322 222345689999999999988999999999999999999999999975432111 0111110000000
Q ss_pred cc-----ccccccCCCCCC---CCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 636 RE-----GLERIIDPSLGN---DVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 636 ~~-----~l~~ivD~~l~~---~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
.. .....+...-.. ....+....+.+++.+|++.||++||++.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 232 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred hchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 00 000000000000 001123456789999999999999999999975
No 101
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=3.7e-37 Score=330.53 Aligned_cols=265 Identities=23% Similarity=0.438 Sum_probs=204.3
Q ss_pred hCCcceeeeeeecCcEEEEEEEee-----------------CCCEEEEEEeecc-cchhhHHHHHHHHHHhhccccccee
Q 003605 408 TGNFDASRILGEGGFGLVYSGVLD-----------------DGTKVAVKVLKRV-DQQGGREFLAEVEMLSRLHHRNLVK 469 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l~-----------------dg~~VAVK~lk~~-~~~~~~~f~~Ei~iL~~L~HpNIV~ 469 (808)
.++|++.+.||+|+||.||++... ++..||+|+++.. .....++|.+|++++++++|+||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~ 83 (296)
T cd05095 4 RKRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIR 83 (296)
T ss_pred hhhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcce
Confidence 357889999999999999998532 2346899999753 3444578999999999999999999
Q ss_pred EEeeeeeccceEEEEeecCCCCcccccccccc-------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccC
Q 003605 470 LIGICIEEQARCLVYELIPNGSVESHLHGVDK-------ESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSN 542 (808)
Q Consensus 470 L~g~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~-------~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsN 542 (808)
+++++...+..++||||+++|+|.++++.... ....++|.+++.++.|++.||+|||+.+ ++||||||+|
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dlkp~N 160 (296)
T cd05095 84 LLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLN---FVHRDLATRN 160 (296)
T ss_pred EEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCC---eecccCChhe
Confidence 99999999999999999999999999875321 1235888999999999999999999998 9999999999
Q ss_pred eeecCCCcceecccccccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh--CCCCCCCCCCC
Q 003605 543 ILLEHDFTPKVSDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS--GRKPVDMTQPP 620 (808)
Q Consensus 543 ILLd~~~~vKL~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT--G~~P~~~~~~~ 620 (808)
||+++++.++|+|||+++...............++..|++||....+.++.++|||||||++|||++ |..||......
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~ 240 (296)
T cd05095 161 CLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDE 240 (296)
T ss_pred EEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChH
Confidence 9999999999999999976543322222233345678999999988899999999999999999998 66777543221
Q ss_pred CcchhHHhhhhhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 003605 621 GQENLVAWARPLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALK 685 (808)
Q Consensus 621 ~~~~lv~w~~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le 685 (808)
.............. .... ...+..+...+.+++.+||+.||++||++.||++.|+
T Consensus 241 ---~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 241 ---QVIENTGEFFRDQG--RQVY-----LPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred ---HHHHHHHHHHhhcc--cccc-----CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 11111100000000 0000 0112233468899999999999999999999999886
No 102
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1.5e-37 Score=350.55 Aligned_cols=263 Identities=25% Similarity=0.413 Sum_probs=206.9
Q ss_pred HhCCcceeeeeeecCcEEEEEEEee------CCCEEEEEEeeccc-chhhHHHHHHHHHHhhcc-cccceeEEeeeeecc
Q 003605 407 ATGNFDASRILGEGGFGLVYSGVLD------DGTKVAVKVLKRVD-QQGGREFLAEVEMLSRLH-HRNLVKLIGICIEEQ 478 (808)
Q Consensus 407 at~~f~~~~~LG~G~fG~VYkg~l~------dg~~VAVK~lk~~~-~~~~~~f~~Ei~iL~~L~-HpNIV~L~g~~~~~~ 478 (808)
..++|.+.++||+|+||.||+|++. .++.||||+++... ....+.+.+|+++|.++. |+||++++++|...+
T Consensus 35 ~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~ 114 (401)
T cd05107 35 PRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGG 114 (401)
T ss_pred cHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCC
Confidence 4456777899999999999999853 34679999997542 233457899999999997 999999999999999
Q ss_pred ceEEEEeecCCCCcccccccccc---------------------------------------------------------
Q 003605 479 ARCLVYELIPNGSVESHLHGVDK--------------------------------------------------------- 501 (808)
Q Consensus 479 ~~~LV~Ey~~~GsL~~~L~~~~~--------------------------------------------------------- 501 (808)
..++|+||+.+|+|.++|+....
T Consensus 115 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (401)
T cd05107 115 PIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQD 194 (401)
T ss_pred CcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhc
Confidence 99999999999999999975321
Q ss_pred -------------------------------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCee
Q 003605 502 -------------------------------------ESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNIL 544 (808)
Q Consensus 502 -------------------------------------~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNIL 544 (808)
....++|..+++|+.|++.||+|||+.+ |+||||||+|||
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrdlkp~NiL 271 (401)
T cd05107 195 MKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKN---CVHRDLAARNVL 271 (401)
T ss_pred chhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCC---cCcccCCcceEE
Confidence 1124788889999999999999999887 999999999999
Q ss_pred ecCCCcceecccccccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcc
Q 003605 545 LEHDFTPKVSDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQE 623 (808)
Q Consensus 545 Ld~~~~vKL~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~ 623 (808)
+++++.+||+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |+.||...... .
T Consensus 272 l~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~--~ 349 (401)
T cd05107 272 ICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMN--E 349 (401)
T ss_pred EeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCch--H
Confidence 99999999999999986533222112223456788999999998889999999999999999998 88888543211 1
Q ss_pred hhHHhhhhhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHH
Q 003605 624 NLVAWARPLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLVC 688 (808)
Q Consensus 624 ~lv~w~~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~ 688 (808)
.+. ..+........+......+.+|+.+||+.+|++||+++||++.|+.++
T Consensus 350 ~~~--------------~~~~~~~~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 350 QFY--------------NAIKRGYRMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred HHH--------------HHHHcCCCCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 000 011111111122334568999999999999999999999999999764
No 103
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=5.2e-37 Score=342.77 Aligned_cols=252 Identities=23% Similarity=0.310 Sum_probs=196.3
Q ss_pred CcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc---cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEe
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV---DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYE 485 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~---~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~E 485 (808)
.|...+.||+|+||+||+|+.. +++.||||+++.. .....+.+.+|++++++++|+||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 5888999999999999999864 6889999999753 23345678999999999999999999999999999999999
Q ss_pred ecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccc
Q 003605 486 LIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDE 565 (808)
Q Consensus 486 y~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~ 565 (808)
|+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+||||+.++++||+|||+++.....
T Consensus 82 ~~~gg~L~~~l~~----~~~~~e~~~~~~~~qi~~aL~~LH~~g---ivHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~ 154 (381)
T cd05626 82 YIPGGDMMSLLIR----MEVFPEVLARFYIAELTLAIESVHKMG---FIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWT 154 (381)
T ss_pred cCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCcHHHEEECCCCCEEEeeCcCCcccccc
Confidence 9999999999853 235888999999999999999999988 999999999999999999999999997543110
Q ss_pred cc---------------------------------------------cccccccccccccccchhhhcCCCccccceeeH
Q 003605 566 ES---------------------------------------------RHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSY 600 (808)
Q Consensus 566 ~~---------------------------------------------~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSf 600 (808)
.. ........||..|+|||++.+..++.++|||||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl 234 (381)
T cd05626 155 HNSKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSV 234 (381)
T ss_pred cccccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeeh
Confidence 00 001123469999999999998889999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCc-chhHHhhhhhcccccccccccCCCCCCCCChhhHHHHHHHHHH--ccccCCCCCCCH
Q 003605 601 GVVILELLSGRKPVDMTQPPGQ-ENLVAWARPLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASM--CVQPEVQHRPFM 677 (808)
Q Consensus 601 GvvLlELlTG~~P~~~~~~~~~-~~lv~w~~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~--Cl~~dP~~RPsm 677 (808)
||++|||+||+.||........ ..+..|.. .+..........++.+++.+ |+..++..|+++
T Consensus 235 G~il~elltG~~Pf~~~~~~~~~~~i~~~~~---------------~~~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~ 299 (381)
T cd05626 235 GVILFEMLVGQPPFLAPTPTETQLKVINWEN---------------TLHIPPQVKLSPEAVDLITKLCCSAEERLGRNGA 299 (381)
T ss_pred hhHHHHHHhCCCCCcCCCHHHHHHHHHcccc---------------ccCCCCCCCCCHHHHHHHHHHccCcccccCCCCH
Confidence 9999999999999975432110 00111100 00000111223566777776 556666679999
Q ss_pred HHHHHH
Q 003605 678 GEVVQA 683 (808)
Q Consensus 678 ~eVl~~ 683 (808)
.|+++.
T Consensus 300 ~~~l~h 305 (381)
T cd05626 300 DDIKAH 305 (381)
T ss_pred HHHhcC
Confidence 999764
No 104
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=5.8e-37 Score=332.39 Aligned_cols=264 Identities=26% Similarity=0.428 Sum_probs=207.6
Q ss_pred hCCcceeeeeeecCcEEEEEEEee--------CCCEEEEEEeecc-cchhhHHHHHHHHHHhhc-ccccceeEEeeeeec
Q 003605 408 TGNFDASRILGEGGFGLVYSGVLD--------DGTKVAVKVLKRV-DQQGGREFLAEVEMLSRL-HHRNLVKLIGICIEE 477 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l~--------dg~~VAVK~lk~~-~~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~~~~~ 477 (808)
.++|.+.+.||+|+||.||++... +...+|+|+++.. ......++.+|++++.++ +|+||++++++|.+.
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE 90 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence 357888999999999999999742 2457899998753 234456789999999999 699999999999998
Q ss_pred cceEEEEeecCCCCcccccccccc------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeee
Q 003605 478 QARCLVYELIPNGSVESHLHGVDK------------ESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILL 545 (808)
Q Consensus 478 ~~~~LV~Ey~~~GsL~~~L~~~~~------------~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILL 545 (808)
+..++||||+++|+|.+++..... ....++|.++++++.|++.||+|||+++ ++||||||+|||+
T Consensus 91 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~g---i~H~dlkp~Nill 167 (314)
T cd05099 91 GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRR---CIHRDLAARNVLV 167 (314)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCC---eeeccccceeEEE
Confidence 999999999999999999964321 1245899999999999999999999988 9999999999999
Q ss_pred cCCCcceecccccccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcch
Q 003605 546 EHDFTPKVSDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQEN 624 (808)
Q Consensus 546 d~~~~vKL~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~ 624 (808)
++++.+||+|||+++...............++..|+|||++.++.++.++|||||||++|||++ |..||..... ..
T Consensus 168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~---~~ 244 (314)
T cd05099 168 TEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV---EE 244 (314)
T ss_pred cCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH---HH
Confidence 9999999999999986543222211122234567999999999999999999999999999999 8888854221 11
Q ss_pred hHHhhhhhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHhh
Q 003605 625 LVAWARPLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLVCNEC 691 (808)
Q Consensus 625 lv~w~~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~~~~ 691 (808)
+..... .. .....+......+.+++.+|++.+|++||++.|+++.|+.+....
T Consensus 245 ~~~~~~----~~----------~~~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~ 297 (314)
T cd05099 245 LFKLLR----EG----------HRMDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAV 297 (314)
T ss_pred HHHHHH----cC----------CCCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHh
Confidence 111111 00 001122334467889999999999999999999999999876543
No 105
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=2.3e-37 Score=340.60 Aligned_cols=264 Identities=25% Similarity=0.392 Sum_probs=204.4
Q ss_pred hCCcceeeeeeecCcEEEEEEEe------eCCCEEEEEEeeccc-chhhHHHHHHHHHHhhc-ccccceeEEeeeeec-c
Q 003605 408 TGNFDASRILGEGGFGLVYSGVL------DDGTKVAVKVLKRVD-QQGGREFLAEVEMLSRL-HHRNLVKLIGICIEE-Q 478 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l------~dg~~VAVK~lk~~~-~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~~~~~-~ 478 (808)
.++|++.+.||+|+||.||+|.. .+++.||||+++... ....+.+.+|++++.++ +|+||++++++|... .
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 45788999999999999999973 356889999997532 33456788999999999 689999999988654 4
Q ss_pred ceEEEEeecCCCCcccccccccc---------------------------------------------------------
Q 003605 479 ARCLVYELIPNGSVESHLHGVDK--------------------------------------------------------- 501 (808)
Q Consensus 479 ~~~LV~Ey~~~GsL~~~L~~~~~--------------------------------------------------------- 501 (808)
..++||||+++|+|.++++....
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence 57899999999999999864211
Q ss_pred ------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccccccccccc
Q 003605 502 ------ESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRHISTRVM 575 (808)
Q Consensus 502 ------~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~~~~~~~ 575 (808)
....++|..+++++.|+++||+|||+.+ |+||||||+|||+++++++||+|||+++...............
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~ 242 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRK---CIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDAR 242 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCC
Confidence 0124788999999999999999999988 9999999999999999999999999997653322211222234
Q ss_pred cccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCCCCChh
Q 003605 576 GTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGNDVPFD 654 (808)
Q Consensus 576 Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~~~~~~ 654 (808)
++..|+|||++.+..++.++||||||+++|||++ |..||...... ..+..- +.... ....+..
T Consensus 243 ~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~----~~~~~----------~~~~~~~ 306 (343)
T cd05103 243 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--EEFCRR----LKEGT----------RMRAPDY 306 (343)
T ss_pred CCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCcccc--HHHHHH----HhccC----------CCCCCCC
Confidence 5678999999999999999999999999999997 88888643211 111110 00000 0011112
Q ss_pred hHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHh
Q 003605 655 SVAKVAAIASMCVQPEVQHRPFMGEVVQALKLVCNE 690 (808)
Q Consensus 655 ~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~~~ 690 (808)
....+.+++.+||+.+|++||++.||++.|+.+.+.
T Consensus 307 ~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~~ 342 (343)
T cd05103 307 TTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQA 342 (343)
T ss_pred CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhc
Confidence 235689999999999999999999999999988653
No 106
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=2.2e-37 Score=337.88 Aligned_cols=242 Identities=26% Similarity=0.346 Sum_probs=195.6
Q ss_pred eeeeecCcEEEEEEEee-CCCEEEEEEeecc---cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecCCC
Q 003605 415 RILGEGGFGLVYSGVLD-DGTKVAVKVLKRV---DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIPNG 490 (808)
Q Consensus 415 ~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~---~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~~G 490 (808)
++||+|+||.||++... +|+.||+|+++.. ......++.+|++++..++|+||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 46999999999999864 7899999999753 2334567788999999999999999999999999999999999999
Q ss_pred CccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCcEEeeeecccCeeecCCCcceecccccccccccccccc
Q 003605 491 SVESHLHGVDKESAPLGWDARLKIALGAARALAYLHE-DSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRH 569 (808)
Q Consensus 491 sL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~-~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~ 569 (808)
+|.+++.. ...+++..+..++.|++.||+|||+ .+ |+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 ~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~lH~~~~---ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~--~ 151 (325)
T cd05594 81 ELFFHLSR----ERVFSEDRARFYGAEIVSALDYLHSEKN---VVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG--A 151 (325)
T ss_pred cHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhcCC---EEecCCCCCeEEECCCCCEEEecCCCCeecCCCC--c
Confidence 99988852 3468999999999999999999997 56 9999999999999999999999999987533221 1
Q ss_pred cccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCC
Q 003605 570 ISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGN 649 (808)
Q Consensus 570 ~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~ 649 (808)
......||..|+|||++.+..++.++|||||||+||||+||+.||..... ..+... ... .. .
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~---~~~~~~---i~~----------~~--~ 213 (325)
T cd05594 152 TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH---EKLFEL---ILM----------EE--I 213 (325)
T ss_pred ccccccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCH---HHHHHH---Hhc----------CC--C
Confidence 12335689999999999999999999999999999999999999964321 111111 000 00 0
Q ss_pred CCChhhHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 003605 650 DVPFDSVAKVAAIASMCVQPEVQHRP-----FMGEVVQA 683 (808)
Q Consensus 650 ~~~~~~~~~l~~Li~~Cl~~dP~~RP-----sm~eVl~~ 683 (808)
.++......+.+++.+||+.||++|+ ++.++++.
T Consensus 214 ~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 252 (325)
T cd05594 214 RFPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQH 252 (325)
T ss_pred CCCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhcC
Confidence 12223346788999999999999996 89998765
No 107
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=5.4e-37 Score=323.71 Aligned_cols=255 Identities=28% Similarity=0.454 Sum_probs=203.4
Q ss_pred CcceeeeeeecCcEEEEEEEee-CC---CEEEEEEeecc-cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEE
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-DG---TKVAVKVLKRV-DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVY 484 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-dg---~~VAVK~lk~~-~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~ 484 (808)
.|++.+.||+|+||.||+|.+. ++ ..||||.++.. .....++|..|+.++++++|+||+++++++.+++..++||
T Consensus 5 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 84 (269)
T cd05065 5 CVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMIIT 84 (269)
T ss_pred HeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEEE
Confidence 4778899999999999999975 33 36999998753 3445678999999999999999999999999999999999
Q ss_pred eecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccc
Q 003605 485 ELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMD 564 (808)
Q Consensus 485 Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~ 564 (808)
||+++|+|.++++.. ...+++.+++.++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++....
T Consensus 85 e~~~~~~L~~~l~~~---~~~~~~~~~~~i~~~l~~al~~lH~~g---~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~ 158 (269)
T cd05065 85 EFMENGALDSFLRQN---DGQFTVIQLVGMLRGIAAGMKYLSEMN---YVHRDLAARNILVNSNLVCKVSDFGLSRFLED 158 (269)
T ss_pred ecCCCCcHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccChheEEEcCCCcEEECCCcccccccc
Confidence 999999999998632 335899999999999999999999988 99999999999999999999999999875433
Q ss_pred ccccccccc-cc--cccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhcccccccc
Q 003605 565 EESRHISTR-VM--GTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLE 640 (808)
Q Consensus 565 ~~~~~~~~~-~~--Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~ 640 (808)
......... .. .+..|+|||++....++.++|||||||++|||++ |..||..... .....+....
T Consensus 159 ~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~---~~~~~~i~~~-------- 227 (269)
T cd05065 159 DTSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN---QDVINAIEQD-------- 227 (269)
T ss_pred CccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCH---HHHHHHHHcC--------
Confidence 221111111 11 2457999999999999999999999999999887 9999864321 1222222110
Q ss_pred cccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 003605 641 RIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLV 687 (808)
Q Consensus 641 ~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i 687 (808)
.....+.+....+.+++.+|++.+|++||++.+|+..|+.+
T Consensus 228 ------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 228 ------YRLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred ------CcCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 00111223456788999999999999999999999998864
No 108
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=2.7e-37 Score=329.59 Aligned_cols=248 Identities=25% Similarity=0.355 Sum_probs=197.2
Q ss_pred eeecCcEEEEEEEee-CCCEEEEEEeeccc---chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecCCCCc
Q 003605 417 LGEGGFGLVYSGVLD-DGTKVAVKVLKRVD---QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIPNGSV 492 (808)
Q Consensus 417 LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~---~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~~GsL 492 (808)
||+|+||+||++... +++.||||.+.... ....+.+..|++++++++|+||+++.+++..++..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 699999999999865 78899999987432 22345678899999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccccccccc
Q 003605 493 ESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRHIST 572 (808)
Q Consensus 493 ~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~~~~ 572 (808)
.+++.........+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++....... ...
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~--~~~ 155 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRR---IIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQS--KTK 155 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCccceecCCCCc--ccc
Confidence 9888644444457999999999999999999999988 99999999999999999999999999976533221 123
Q ss_pred ccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCCCCC
Q 003605 573 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGNDVP 652 (808)
Q Consensus 573 ~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~~~~ 652 (808)
...||..|+|||++.+..++.++|||||||++|||++|+.||........ ...... .+.... ..++
T Consensus 156 ~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~--~~~~~~----------~~~~~~--~~~~ 221 (280)
T cd05608 156 GYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE--NKELKQ----------RILNDS--VTYP 221 (280)
T ss_pred ccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcchh--HHHHHH----------hhcccC--CCCc
Confidence 35689999999999999999999999999999999999999965332111 000000 111111 1122
Q ss_pred hhhHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 003605 653 FDSVAKVAAIASMCVQPEVQHRP-----FMGEVVQA 683 (808)
Q Consensus 653 ~~~~~~l~~Li~~Cl~~dP~~RP-----sm~eVl~~ 683 (808)
......+.+++.+||+.||++|| +++++++.
T Consensus 222 ~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~h 257 (280)
T cd05608 222 DKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRTH 257 (280)
T ss_pred ccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhcC
Confidence 33456789999999999999999 66666653
No 109
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=5.9e-37 Score=334.85 Aligned_cols=252 Identities=25% Similarity=0.337 Sum_probs=198.5
Q ss_pred CcceeeeeeecCcEEEEEEEe----eCCCEEEEEEeecc----cchhhHHHHHHHHHHhhc-ccccceeEEeeeeeccce
Q 003605 410 NFDASRILGEGGFGLVYSGVL----DDGTKVAVKVLKRV----DQQGGREFLAEVEMLSRL-HHRNLVKLIGICIEEQAR 480 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l----~dg~~VAVK~lk~~----~~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~~~~~~~~ 480 (808)
+|++.+.||+|+||.||++.. .+++.||+|++++. .....+.+.+|++++.++ +|+||+++++++..++..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 588899999999999999875 35789999999742 223345688999999999 599999999999999999
Q ss_pred EEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccc
Q 003605 481 CLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLAR 560 (808)
Q Consensus 481 ~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~ 560 (808)
++||||+++|+|.+++.. ...+++.++..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 81 ~lv~e~~~~g~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nili~~~~~~kl~DfG~~~ 153 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQ----RDNFSEDEVRFYSGEIILALEHLHKLG---IVYRDIKLENILLDSEGHVVLTDFGLSK 153 (332)
T ss_pred EEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHeEECCCCCEEEeeCcCCc
Confidence 999999999999999853 345899999999999999999999988 9999999999999999999999999997
Q ss_pred ccccccccccccccccccccccchhhhcC-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccccccc
Q 003605 561 SAMDEESRHISTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGL 639 (808)
Q Consensus 561 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l 639 (808)
....... .......||..|+|||++.+. .++.++|||||||+||||+||+.||.......... ........
T Consensus 154 ~~~~~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~--~~~~~~~~----- 225 (332)
T cd05614 154 EFLSEEK-ERTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNTQS--EVSRRILK----- 225 (332)
T ss_pred cccccCC-CccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCCHH--HHHHHHhc-----
Confidence 6433222 122345689999999998765 47889999999999999999999996433221111 11111110
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 003605 640 ERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRP-----FMGEVVQA 683 (808)
Q Consensus 640 ~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RP-----sm~eVl~~ 683 (808)
.++ .++......+.+++.+||+.||++|| ++.++++.
T Consensus 226 ---~~~----~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 267 (332)
T cd05614 226 ---CDP----PFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKEH 267 (332)
T ss_pred ---CCC----CCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHcC
Confidence 111 12223346788999999999999999 66677653
No 110
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=5.7e-37 Score=335.63 Aligned_cols=248 Identities=22% Similarity=0.348 Sum_probs=196.9
Q ss_pred eeeeecCcEEEEEEEee-CCCEEEEEEeecc---cchhhHHHHHHHHHHhhc-ccccceeEEeeeeeccceEEEEeecCC
Q 003605 415 RILGEGGFGLVYSGVLD-DGTKVAVKVLKRV---DQQGGREFLAEVEMLSRL-HHRNLVKLIGICIEEQARCLVYELIPN 489 (808)
Q Consensus 415 ~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~---~~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~~~~~~~~~LV~Ey~~~ 489 (808)
++||+|+||.||++... +++.||||+++.. .....+.+.+|+.++.++ +|+||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 46999999999999865 6889999999853 233445688999999998 799999999999999999999999999
Q ss_pred CCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccccc
Q 003605 490 GSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRH 569 (808)
Q Consensus 490 GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~ 569 (808)
|+|.+++.. ...+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 g~L~~~~~~----~~~l~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~--~ 151 (329)
T cd05588 81 GDLMFHMQR----QRKLPEEHARFYSAEISLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPG--D 151 (329)
T ss_pred CCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEECcCccccccccCC--C
Confidence 999988852 346999999999999999999999998 9999999999999999999999999987432211 1
Q ss_pred cccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCC--cchhHHhhhhhcccccccccccCCCC
Q 003605 570 ISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPG--QENLVAWARPLLTSREGLERIIDPSL 647 (808)
Q Consensus 570 ~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~--~~~lv~w~~~~~~~~~~l~~ivD~~l 647 (808)
......||..|+|||++.+..++.++|||||||++|||+||+.||+...... .....+|...... ....
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~---------~~~~ 222 (329)
T cd05588 152 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVIL---------EKQI 222 (329)
T ss_pred ccccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHH---------cCCC
Confidence 2234578999999999999999999999999999999999999997533221 1112222211111 1111
Q ss_pred CCCCChhhHHHHHHHHHHccccCCCCCCC------HHHHHH
Q 003605 648 GNDVPFDSVAKVAAIASMCVQPEVQHRPF------MGEVVQ 682 (808)
Q Consensus 648 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs------m~eVl~ 682 (808)
..+......+.+++.+||+.||++|++ +.++++
T Consensus 223 --~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 223 --RIPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred --CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 122334567899999999999999997 556653
No 111
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=3.5e-37 Score=339.75 Aligned_cols=246 Identities=24% Similarity=0.325 Sum_probs=199.6
Q ss_pred hCCcceeeeeeecCcEEEEEEEeeC--CCEEEEEEeecc---cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEE
Q 003605 408 TGNFDASRILGEGGFGLVYSGVLDD--GTKVAVKVLKRV---DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCL 482 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l~d--g~~VAVK~lk~~---~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~L 482 (808)
.++|.+.+.||+|+||.||+|...+ +..||+|++... .....+.+.+|++++..++|+||+++++++.+++..++
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 3568899999999999999998653 368999998642 23345678899999999999999999999999999999
Q ss_pred EEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccc
Q 003605 483 VYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSA 562 (808)
Q Consensus 483 V~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~ 562 (808)
||||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++++||+|||+++..
T Consensus 109 v~Ey~~~g~L~~~i~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~ikL~DFG~a~~~ 181 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRR----NKRFPNDVGCFYAAQIVLIFEYLQSLN---IVYRDLKPENLLLDKDGFIKMTDFGFAKVV 181 (340)
T ss_pred EEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEecCCCCeec
Confidence 9999999999999853 345899999999999999999999998 999999999999999999999999999764
Q ss_pred ccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccc
Q 003605 563 MDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERI 642 (808)
Q Consensus 563 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~i 642 (808)
... .....||+.|+|||++.+..++.++|||||||++|||++|+.||..... ...+ ....
T Consensus 182 ~~~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~-----~~~~-~~i~--------- 241 (340)
T PTZ00426 182 DTR-----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEP-----LLIY-QKIL--------- 241 (340)
T ss_pred CCC-----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCH-----HHHH-HHHh---------
Confidence 321 1235689999999999998899999999999999999999999964321 1111 0011
Q ss_pred cCCCCCCCCChhhHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 003605 643 IDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRP-----FMGEVVQA 683 (808)
Q Consensus 643 vD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RP-----sm~eVl~~ 683 (808)
+.. ..++......+.+++.+|++.+|++|+ +++|+++.
T Consensus 242 -~~~--~~~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 242 -EGI--IYFPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred -cCC--CCCCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 100 011222345678999999999999995 78777654
No 112
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=3.3e-37 Score=336.40 Aligned_cols=242 Identities=26% Similarity=0.362 Sum_probs=194.9
Q ss_pred eeeeecCcEEEEEEEe----eCCCEEEEEEeecc----cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEee
Q 003605 415 RILGEGGFGLVYSGVL----DDGTKVAVKVLKRV----DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 415 ~~LG~G~fG~VYkg~l----~dg~~VAVK~lk~~----~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
+.||+|+||.||++.. .+++.||||+++.. .......+.+|+++|++++|+||+++++++..++..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 6799999999999985 35789999999752 223345678999999999999999999999999999999999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEE 566 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~ 566 (808)
+++|+|.++++. ...+.+..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 82 ~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 154 (323)
T cd05584 82 LSGGELFMHLER----EGIFMEDTACFYLSEISLALEHLHQQG---IIYRDLKPENILLDAQGHVKLTDFGLCKESIHEG 154 (323)
T ss_pred CCCchHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEeeCcCCeecccCC
Confidence 999999999853 335788889999999999999999998 9999999999999999999999999987543221
Q ss_pred ccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCC
Q 003605 567 SRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPS 646 (808)
Q Consensus 567 ~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~ 646 (808)
.......||..|+|||++.+..++.++|||||||+||||++|+.||..... ........ ...
T Consensus 155 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~------~~~~~~~~----------~~~ 216 (323)
T cd05584 155 --TVTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENR------KKTIDKIL----------KGK 216 (323)
T ss_pred --CcccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCH------HHHHHHHH----------cCC
Confidence 122345689999999999988899999999999999999999999964321 11111111 111
Q ss_pred CCCCCChhhHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 003605 647 LGNDVPFDSVAKVAAIASMCVQPEVQHRP-----FMGEVVQA 683 (808)
Q Consensus 647 l~~~~~~~~~~~l~~Li~~Cl~~dP~~RP-----sm~eVl~~ 683 (808)
...+......+.+++.+||+.+|++|| ++.++++.
T Consensus 217 --~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~h 256 (323)
T cd05584 217 --LNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQSH 256 (323)
T ss_pred --CCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhcC
Confidence 112223346788999999999999999 77777653
No 113
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=4.9e-37 Score=322.38 Aligned_cols=254 Identities=29% Similarity=0.454 Sum_probs=203.8
Q ss_pred hCCcceeeeeeecCcEEEEEEEeeCCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeec
Q 003605 408 TGNFDASRILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELI 487 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~ 487 (808)
.++|++.+.||+|+||.||+|...++..+|+|.++.... ..++|.+|++++++++|+|++++++++. .+..+++|||+
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~lv~e~~ 82 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIYIVTEYM 82 (260)
T ss_pred hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcEEEEEec
Confidence 346788899999999999999988888999999975332 3467999999999999999999999885 45679999999
Q ss_pred CCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccc
Q 003605 488 PNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEES 567 (808)
Q Consensus 488 ~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~ 567 (808)
++++|.++++.. ....+++.+++.++.+++.||+|||+.+ ++||||||+||++++++.++|+|||++........
T Consensus 83 ~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~ 157 (260)
T cd05070 83 SKGSLLDFLKDG--EGRALKLPNLVDMAAQVAAGMAYIERMN---YIHRDLRSANILVGDGLVCKIADFGLARLIEDNEY 157 (260)
T ss_pred CCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCccceEEEeCCceEEeCCceeeeeccCccc
Confidence 999999999742 2335899999999999999999999988 99999999999999999999999999976533221
Q ss_pred cccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhcccccccccccCCC
Q 003605 568 RHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPS 646 (808)
Q Consensus 568 ~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~ 646 (808)
. ......++..|+|||++.+..++.++||||||+++|||++ |+.||..... .....+.. ..
T Consensus 158 ~-~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~---~~~~~~~~--------------~~ 219 (260)
T cd05070 158 T-ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNN---REVLEQVE--------------RG 219 (260)
T ss_pred c-cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCH---HHHHHHHH--------------cC
Confidence 1 1112235668999999988899999999999999999999 8888864321 11111111 01
Q ss_pred CCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 003605 647 LGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKL 686 (808)
Q Consensus 647 l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~ 686 (808)
.....+.+....+.+++.+|++.+|++|||++++++.|++
T Consensus 220 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 220 YRMPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred CCCCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 1112233445679999999999999999999999998874
No 114
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=5.7e-37 Score=319.24 Aligned_cols=247 Identities=32% Similarity=0.463 Sum_probs=198.8
Q ss_pred eeeeecCcEEEEEEEeeCCCEEEEEEeeccc-chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecCCCCcc
Q 003605 415 RILGEGGFGLVYSGVLDDGTKVAVKVLKRVD-QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIPNGSVE 493 (808)
Q Consensus 415 ~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~-~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~~GsL~ 493 (808)
++||+|+||.||+|...+++.+|+|.++... ......|.+|++++++++|+||++++++|...+..++||||+++++|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 3699999999999998888999999987543 333457899999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccccccccc
Q 003605 494 SHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRHISTR 573 (808)
Q Consensus 494 ~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~~~~~ 573 (808)
+++... ...++|..++.++.+++.||.|||+.+ ++||||||+||++++++.+||+|||++....... ......
T Consensus 81 ~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~-~~~~~~ 153 (250)
T cd05085 81 SFLRKK---KDELKTKQLVKFALDAAAGMAYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSRQEDDGI-YSSSGL 153 (250)
T ss_pred HHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecccChheEEEcCCCeEEECCCccceeccccc-cccCCC
Confidence 998632 235899999999999999999999988 9999999999999999999999999987532211 111112
Q ss_pred cccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCCCCC
Q 003605 574 VMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGNDVP 652 (808)
Q Consensus 574 ~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~~~~ 652 (808)
..++..|+|||++.++.++.++||||||+++|||++ |..||..... ....... . .......+
T Consensus 154 ~~~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~---~~~~~~~----~----------~~~~~~~~ 216 (250)
T cd05085 154 KQIPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTN---QQAREQV----E----------KGYRMSCP 216 (250)
T ss_pred CCCcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCH---HHHHHHH----H----------cCCCCCCC
Confidence 234567999999999999999999999999999998 9999864321 1111111 0 01111122
Q ss_pred hhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 003605 653 FDSVAKVAAIASMCVQPEVQHRPFMGEVVQALK 685 (808)
Q Consensus 653 ~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le 685 (808)
......+.+++.+|++.+|++||++.|++++|.
T Consensus 217 ~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 217 QKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 334578999999999999999999999998874
No 115
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=6.5e-37 Score=319.09 Aligned_cols=250 Identities=24% Similarity=0.396 Sum_probs=204.9
Q ss_pred CcceeeeeeecCcEEEEEEEee-CCCEEEEEEeec--ccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEee
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKR--VDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~--~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
+|...+.||+|+||.||+|+.. +++.|++|.+.. ......+++.+|++++++++|+||+++++++.+.+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4778899999999999999975 689999999864 2345567899999999999999999999999999999999999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEE 566 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~ 566 (808)
+++++|.++++.. ....+++..+++++.+++.||+|||+.+ ++|+||||+||+++.++.++|+|||+++......
T Consensus 81 ~~~~~L~~~l~~~--~~~~~~~~~~~~i~~~l~~al~~lH~~~---i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~ 155 (256)
T cd08529 81 AENGDLHKLLKMQ--RGRPLPEDQVWRFFIQILLGLAHLHSKK---ILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNT 155 (256)
T ss_pred CCCCcHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEEeCCCCEEEcccccceeccCcc
Confidence 9999999999743 2346899999999999999999999987 9999999999999999999999999988654322
Q ss_pred ccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCC
Q 003605 567 SRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPS 646 (808)
Q Consensus 567 ~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~ 646 (808)
. ......|+..|+|||++.+..++.++|||||||++|||++|+.||.... ........ .. .
T Consensus 156 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---~~~~~~~~---~~--~--------- 216 (256)
T cd08529 156 N--FANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANN---QGALILKI---IR--G--------- 216 (256)
T ss_pred c--hhhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCC---HHHHHHHH---Hc--C---------
Confidence 1 1233457889999999999999999999999999999999999996432 11111111 00 0
Q ss_pred CCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 647 LGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 647 l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
.....+......+.+++.+|++.+|++||++.++++.
T Consensus 217 ~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 217 VFPPVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred CCCCCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 0011122344678999999999999999999999764
No 116
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=2.1e-37 Score=338.18 Aligned_cols=253 Identities=23% Similarity=0.257 Sum_probs=201.0
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc---cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEE
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV---DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVY 484 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~---~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~ 484 (808)
++|.+.+.||+|+||+||++... +++.||||+++.. .....+.+.+|+++++.++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 47899999999999999999865 7899999999853 2334567889999999999999999999999999999999
Q ss_pred eecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccc
Q 003605 485 ELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMD 564 (808)
Q Consensus 485 Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~ 564 (808)
||+++|+|.++++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 81 e~~~~~~L~~~l~~~---~~~l~~~~~~~~~~qi~~aL~~lH~~~---i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~ 154 (330)
T cd05601 81 EYQPGGDLLSLLNRY---EDQFDEDMAQFYLAELVLAIHSVHQMG---YVHRDIKPENVLIDRTGHIKLADFGSAARLTA 154 (330)
T ss_pred CCCCCCCHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEcccCchHheEECCCCCEEeccCCCCeECCC
Confidence 999999999999632 246899999999999999999999998 99999999999999999999999999976543
Q ss_pred ccccccccccccccccccchhhh------cCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccc
Q 003605 565 EESRHISTRVMGTFGYVAPEYAM------TGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREG 638 (808)
Q Consensus 565 ~~~~~~~~~~~Gt~~Y~APE~l~------~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~ 638 (808)
... .......||..|+|||++. ...++.++|||||||++|||++|+.||..... ......++....
T Consensus 155 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~------~~~~~~i~~~~~- 226 (330)
T cd05601 155 NKM-VNSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTS------AKTYNNIMNFQR- 226 (330)
T ss_pred CCc-eeeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCH------HHHHHHHHcCCC-
Confidence 221 1223346899999999986 45678999999999999999999999964321 111111111000
Q ss_pred cccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 639 LERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 639 l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
. +.-.........+.+++..|++ +|++||++.++++.
T Consensus 227 ---~----~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~h 263 (330)
T cd05601 227 ---F----LKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCCH 263 (330)
T ss_pred ---c----cCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhCC
Confidence 0 0000111234678889999998 99999999998653
No 117
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=3.3e-37 Score=328.95 Aligned_cols=258 Identities=27% Similarity=0.472 Sum_probs=204.9
Q ss_pred hCCcceeeeeeecCcEEEEEEEee------CCCEEEEEEeecc-cchhhHHHHHHHHHHhhcccccceeEEeeeeeccce
Q 003605 408 TGNFDASRILGEGGFGLVYSGVLD------DGTKVAVKVLKRV-DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQAR 480 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l~------dg~~VAVK~lk~~-~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~ 480 (808)
.++|+..+.||+|+||.||++... ++..||+|+++.. .....++|.+|+.++++++|+||++++++|.+++..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 467889999999999999999863 4678999998753 234457799999999999999999999999999999
Q ss_pred EEEEeecCCCCccccccccc------------------cCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccC
Q 003605 481 CLVYELIPNGSVESHLHGVD------------------KESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSN 542 (808)
Q Consensus 481 ~LV~Ey~~~GsL~~~L~~~~------------------~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsN 542 (808)
++||||+++|+|.++++... .....+++.+++.++.|++.||+|||+.+ ++||||||+|
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~---i~H~dl~p~n 160 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERK---FVHRDLATRN 160 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCC---eecccccHhh
Confidence 99999999999999996421 11235789999999999999999999988 9999999999
Q ss_pred eeecCCCcceecccccccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCC
Q 003605 543 ILLEHDFTPKVSDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPG 621 (808)
Q Consensus 543 ILLd~~~~vKL~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~ 621 (808)
||+++++.+||+|||+++................+..|+|||.+.+..++.++|||||||++|||++ |..||.....
T Consensus 161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~-- 238 (288)
T cd05050 161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAH-- 238 (288)
T ss_pred eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCH--
Confidence 9999999999999999875433222122222334667999999998999999999999999999998 8888753221
Q ss_pred cchhHHhhhhhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 003605 622 QENLVAWARPLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALK 685 (808)
Q Consensus 622 ~~~lv~w~~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le 685 (808)
.....+. . +... ...+.....++.+++.+|++.+|++||++.||++.|+
T Consensus 239 -~~~~~~~---~----------~~~~-~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~ 287 (288)
T cd05050 239 -EEVIYYV---R----------DGNV-LSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQ 287 (288)
T ss_pred -HHHHHHH---h----------cCCC-CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhh
Confidence 1111111 0 0100 0112234567999999999999999999999999986
No 118
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=3.6e-37 Score=343.15 Aligned_cols=253 Identities=23% Similarity=0.311 Sum_probs=196.7
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc---cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEE
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV---DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVY 484 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~---~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~ 484 (808)
++|.+.+.||+|+||+||++... +++.||||++... .....+++.+|++++.+++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 47889999999999999999864 7899999998642 2334567889999999999999999999999999999999
Q ss_pred eecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccc
Q 003605 485 ELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMD 564 (808)
Q Consensus 485 Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~ 564 (808)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 81 E~~~gg~L~~~l~~----~~~~~~~~~~~~~~ql~~aL~~LH~~g---ivHrDlkp~NIll~~~~~~kl~DfGla~~~~~ 153 (377)
T cd05629 81 EFLPGGDLMTMLIK----YDTFSEDVTRFYMAECVLAIEAVHKLG---FIHRDIKPDNILIDRGGHIKLSDFGLSTGFHK 153 (377)
T ss_pred eCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEEeeccccccccc
Confidence 99999999999853 245888999999999999999999998 99999999999999999999999999863321
Q ss_pred cccc---------------------------------------------ccccccccccccccchhhhcCCCccccceee
Q 003605 565 EESR---------------------------------------------HISTRVMGTFGYVAPEYAMTGHLLVKSDVYS 599 (808)
Q Consensus 565 ~~~~---------------------------------------------~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwS 599 (808)
.... .......||+.|+|||++.+..++.++||||
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwS 233 (377)
T cd05629 154 QHDSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWS 233 (377)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEe
Confidence 1000 0001246899999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCC---CC
Q 003605 600 YGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHR---PF 676 (808)
Q Consensus 600 fGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~R---Ps 676 (808)
|||+||||+||+.||...... ... .........+. + + . .......+.+++.+|+. +|.+| ++
T Consensus 234 lGvil~elltG~~Pf~~~~~~---~~~---~~i~~~~~~~~-~--p---~--~~~~s~~~~dli~~lL~-~~~~r~~r~~ 298 (377)
T cd05629 234 LGAIMFECLIGWPPFCSENSH---ETY---RKIINWRETLY-F--P---D--DIHLSVEAEDLIRRLIT-NAENRLGRGG 298 (377)
T ss_pred cchhhhhhhcCCCCCCCCCHH---HHH---HHHHccCCccC-C--C---C--CCCCCHHHHHHHHHHhc-CHhhcCCCCC
Confidence 999999999999999643321 110 00110000000 0 0 0 01234568889999997 66665 59
Q ss_pred HHHHHHH
Q 003605 677 MGEVVQA 683 (808)
Q Consensus 677 m~eVl~~ 683 (808)
+.|+++.
T Consensus 299 ~~~~l~h 305 (377)
T cd05629 299 AHEIKSH 305 (377)
T ss_pred HHHHhcC
Confidence 9888765
No 119
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=5.8e-37 Score=318.64 Aligned_cols=251 Identities=31% Similarity=0.523 Sum_probs=204.7
Q ss_pred eeeeecCcEEEEEEEeeC----CCEEEEEEeecccch-hhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecCC
Q 003605 415 RILGEGGFGLVYSGVLDD----GTKVAVKVLKRVDQQ-GGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIPN 489 (808)
Q Consensus 415 ~~LG~G~fG~VYkg~l~d----g~~VAVK~lk~~~~~-~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~~ 489 (808)
+.||+|+||.||+|...+ +..|++|.++..... ..+++.+|++++.+++|+||+++++++.+.+..++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 469999999999999764 788999999864333 367899999999999999999999999999999999999999
Q ss_pred CCccccccccccC-----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccc
Q 003605 490 GSVESHLHGVDKE-----SAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMD 564 (808)
Q Consensus 490 GsL~~~L~~~~~~-----~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~ 564 (808)
++|.+++...... ...+++.++++++.|++.||+|||+.+ ++||||||+||++++++.+||+|||+++....
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 157 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKK---FVHRDLAARNCLVGEDLVVKISDFGLSRDVYD 157 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCC---cccCccCcceEEECCCCcEEEccccccccccc
Confidence 9999999754221 357999999999999999999999988 99999999999999999999999999987654
Q ss_pred ccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhccccccccccc
Q 003605 565 EESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLERII 643 (808)
Q Consensus 565 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~iv 643 (808)
...........++..|+|||.+....++.++|||||||++|||++ |+.||..... ..+.....
T Consensus 158 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---~~~~~~~~------------- 221 (262)
T cd00192 158 DDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN---EEVLEYLR------------- 221 (262)
T ss_pred ccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH---HHHHHHHH-------------
Confidence 332222334557889999999988889999999999999999999 6999875421 11111111
Q ss_pred CCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 003605 644 DPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALK 685 (808)
Q Consensus 644 D~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le 685 (808)
+ ......+......+.+++.+|++.+|++||++.|+++.|+
T Consensus 222 ~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 222 K-GYRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred c-CCCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 0 0011122334578999999999999999999999998874
No 120
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=6.1e-37 Score=323.15 Aligned_cols=255 Identities=28% Similarity=0.433 Sum_probs=203.6
Q ss_pred hCCcceeeeeeecCcEEEEEEEeeCCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeec
Q 003605 408 TGNFDASRILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELI 487 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~ 487 (808)
.++|.+.+.||+|+||.||+|...+...||+|+++... ...++|.+|++++++++|+||+++++++.+ +..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~-~~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~ 82 (262)
T cd05071 5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYM 82 (262)
T ss_pred hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCc-cCHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEcC
Confidence 35688999999999999999998777789999997532 234679999999999999999999998754 5679999999
Q ss_pred CCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccc
Q 003605 488 PNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEES 567 (808)
Q Consensus 488 ~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~ 567 (808)
++|+|.++++.. ....++|..++.++.|+++||+|||+.+ ++||||||+||++++++.+||+|||+++.......
T Consensus 83 ~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~ 157 (262)
T cd05071 83 SKGSLLDFLKGE--MGKYLRLPQLVDMAAQIASGMAYVERMN---YVHRDLRAANILVGENLVCKVADFGLARLIEDNEY 157 (262)
T ss_pred CCCcHHHHHhhc--cccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccCcccEEEcCCCcEEeccCCceeecccccc
Confidence 999999999642 2235899999999999999999999988 99999999999999999999999999976533221
Q ss_pred cccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhcccccccccccCCC
Q 003605 568 RHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPS 646 (808)
Q Consensus 568 ~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~ 646 (808)
.......++..|+|||+..+..++.++|||||||++|||+| |+.||...... .+.. .... .
T Consensus 158 -~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~---~~~~---~~~~-----------~ 219 (262)
T cd05071 158 -TARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR---EVLD---QVER-----------G 219 (262)
T ss_pred -ccccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChH---HHHH---HHhc-----------C
Confidence 11122346678999999988899999999999999999999 88888543211 1100 0000 0
Q ss_pred CCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 003605 647 LGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLV 687 (808)
Q Consensus 647 l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i 687 (808)
.......+....+.+++.+|++.+|++||+++++++.|++.
T Consensus 220 ~~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 220 YRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred CCCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 00111233456789999999999999999999999999864
No 121
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=5.4e-37 Score=320.95 Aligned_cols=250 Identities=30% Similarity=0.486 Sum_probs=205.2
Q ss_pred hCCcceeeeeeecCcEEEEEEEeeCCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeec
Q 003605 408 TGNFDASRILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELI 487 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~ 487 (808)
.++|++.+.||+|+||.||+|... |+.||||.++.... ..+++.+|+.++++++|+||+++++++.+.+..++||||+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 82 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM 82 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence 356788899999999999999875 78999999986543 5678999999999999999999999999989999999999
Q ss_pred CCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccc
Q 003605 488 PNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEES 567 (808)
Q Consensus 488 ~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~ 567 (808)
++++|.++++... ...++|..++.++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++......
T Consensus 83 ~~~~L~~~~~~~~--~~~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~- 156 (256)
T cd05039 83 AKGSLVDYLRSRG--RAVITLAQQLGFALDVCEGMEYLEEKN---FVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQ- 156 (256)
T ss_pred CCCcHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccchhcccceEEEeCCCCEEEccccccccccccc-
Confidence 9999999996422 236899999999999999999999998 9999999999999999999999999998652211
Q ss_pred cccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhcccccccccccCCC
Q 003605 568 RHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPS 646 (808)
Q Consensus 568 ~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~ 646 (808)
.....+..|+|||++.++.++.++||||||+++|||++ |+.||..... ..+..... ..
T Consensus 157 ----~~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~---~~~~~~~~--------------~~ 215 (256)
T cd05039 157 ----DSGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL---KDVVPHVE--------------KG 215 (256)
T ss_pred ----ccCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCH---HHHHHHHh--------------cC
Confidence 12234668999999998899999999999999999997 9999864321 11111111 00
Q ss_pred CCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 003605 647 LGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKL 686 (808)
Q Consensus 647 l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~ 686 (808)
.....+......+.+++.+|++.+|++||++.|++++|+.
T Consensus 216 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 255 (256)
T cd05039 216 YRMEAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLAL 255 (256)
T ss_pred CCCCCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhc
Confidence 1111222345788999999999999999999999999874
No 122
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=5.1e-37 Score=334.78 Aligned_cols=240 Identities=25% Similarity=0.369 Sum_probs=191.6
Q ss_pred cceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc---chhhHHHHHHHHHH---hhcccccceeEEeeeeeccceEEE
Q 003605 411 FDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD---QQGGREFLAEVEML---SRLHHRNLVKLIGICIEEQARCLV 483 (808)
Q Consensus 411 f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~---~~~~~~f~~Ei~iL---~~L~HpNIV~L~g~~~~~~~~~LV 483 (808)
|++.+.||+|+||.||+|... +++.||||+++... ....+.+.+|++++ ++++|+||+++++++.+.+..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 677899999999999999865 68999999997532 23345667776665 466799999999999999999999
Q ss_pred EeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccc
Q 003605 484 YELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAM 563 (808)
Q Consensus 484 ~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~ 563 (808)
|||+++|+|..+++. ..+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...
T Consensus 81 ~E~~~~~~L~~~~~~-----~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~ 152 (324)
T cd05589 81 MEYAAGGDLMMHIHT-----DVFSEPRAVFYAACVVLGLQYLHENK---IVYRDLKLDNLLLDTEGFVKIADFGLCKEGM 152 (324)
T ss_pred EcCCCCCcHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCcEEeCcccCCccCC
Confidence 999999999988852 35899999999999999999999988 9999999999999999999999999987532
Q ss_pred cccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccccccccccc
Q 003605 564 DEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERII 643 (808)
Q Consensus 564 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~iv 643 (808)
... .......|+..|+|||++.+..++.++|||||||++|||++|+.||..... .. ......
T Consensus 153 ~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~---~~---~~~~i~---------- 214 (324)
T cd05589 153 GFG--DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDE---EE---VFDSIV---------- 214 (324)
T ss_pred CCC--CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCH---HH---HHHHHH----------
Confidence 211 122345689999999999999999999999999999999999999964321 11 111111
Q ss_pred CCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHH
Q 003605 644 DPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMG 678 (808)
Q Consensus 644 D~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~ 678 (808)
... ..++......+.+++.+||+.||++||++.
T Consensus 215 ~~~--~~~p~~~~~~~~~li~~~L~~dP~~R~~~~ 247 (324)
T cd05589 215 NDE--VRYPRFLSREAISIMRRLLRRNPERRLGSG 247 (324)
T ss_pred hCC--CCCCCCCCHHHHHHHHHHhhcCHhHcCCCC
Confidence 100 012223346788999999999999999543
No 123
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=5.2e-37 Score=330.75 Aligned_cols=264 Identities=22% Similarity=0.320 Sum_probs=198.2
Q ss_pred hCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc-chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEe
Q 003605 408 TGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD-QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYE 485 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~-~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~E 485 (808)
.++|++.+.||+|+||.||+|... +++.||||+++... ......+.+|++++++++|+||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 478999999999999999999976 78999999987532 2233567889999999999999999999999999999999
Q ss_pred ecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccc
Q 003605 486 LIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDE 565 (808)
Q Consensus 486 y~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~ 565 (808)
|+. ++|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++.....
T Consensus 84 ~~~-~~l~~~~~~---~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~ 156 (303)
T cd07869 84 YVH-TDLCQYMDK---HPGGLHPENVKLFLFQLLRGLSYIHQRY---ILHRDLKPQNLLISDTGELKLADFGLARAKSVP 156 (303)
T ss_pred CCC-cCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECCCCcceeccCC
Confidence 995 688888753 2345889999999999999999999998 999999999999999999999999998754221
Q ss_pred cccccccccccccccccchhhhc-CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccc--cc-----
Q 003605 566 ESRHISTRVMGTFGYVAPEYAMT-GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTS--RE----- 637 (808)
Q Consensus 566 ~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~--~~----- 637 (808)
. .......++..|+|||++.+ ..++.++|||||||++|||++|+.||...... ............. ..
T Consensus 157 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 232 (303)
T cd07869 157 S--HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDI--QDQLERIFLVLGTPNEDTWPGV 232 (303)
T ss_pred C--ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccH--HHHHHHHHHHhCCCChhhccch
Confidence 1 12233467899999998865 45788999999999999999999999753221 1111111000000 00
Q ss_pred -ccccccCCCCCCCCC---------hhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 638 -GLERIIDPSLGNDVP---------FDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 638 -~l~~ivD~~l~~~~~---------~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
.........+....+ ......+.+++.+||+.||++|||+.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 233 HSLPHFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred hhccccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 000000000000000 012346789999999999999999999976
No 124
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=7.8e-37 Score=326.86 Aligned_cols=252 Identities=24% Similarity=0.343 Sum_probs=201.1
Q ss_pred CcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc---chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEe
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD---QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYE 485 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~---~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~E 485 (808)
+|+..++||+|+||+||++... +++.||||++.... ......+.+|++++++++|+||+++++++.+++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 4788899999999999999865 68999999997422 2234567889999999999999999999999899999999
Q ss_pred ecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccc
Q 003605 486 LIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDE 565 (808)
Q Consensus 486 y~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~ 565 (808)
|+++|+|.+++... ....+++..+..++.|++.||+|||+.+ |+||||||+||++++++.++|+|||+++.....
T Consensus 81 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~ 155 (285)
T cd05605 81 LMNGGDLKFHIYNM--GNPGFDEERAVFYAAEITCGLEDLHRER---IVYRDLKPENILLDDYGHIRISDLGLAVEIPEG 155 (285)
T ss_pred ccCCCcHHHHHHhc--CcCCCCHHHHHHHHHHHHHHHHHHHHCC---cEecCCCHHHEEECCCCCEEEeeCCCceecCCC
Confidence 99999999888632 2345899999999999999999999998 999999999999999999999999998764322
Q ss_pred cccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCC
Q 003605 566 ESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDP 645 (808)
Q Consensus 566 ~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~ 645 (808)
. ......|+..|+|||++.+..++.++|||||||++|||++|+.||........ . ..... .+..
T Consensus 156 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~--~-~~~~~----------~~~~ 219 (285)
T cd05605 156 E---TIRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVK--R-EEVER----------RVKE 219 (285)
T ss_pred C---ccccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchhhH--H-HHHHH----------Hhhh
Confidence 1 11234688999999999988999999999999999999999999975322110 0 00000 0000
Q ss_pred CCCCCCChhhHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 003605 646 SLGNDVPFDSVAKVAAIASMCVQPEVQHRP-----FMGEVVQA 683 (808)
Q Consensus 646 ~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RP-----sm~eVl~~ 683 (808)
....++......+.+++.+|++.||++|| +++++++.
T Consensus 220 -~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 220 -DQEEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred -cccccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 01112233456789999999999999999 77787654
No 125
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=7.5e-37 Score=323.51 Aligned_cols=251 Identities=27% Similarity=0.447 Sum_probs=197.2
Q ss_pred eeeeecCcEEEEEEEee-CCC--EEEEEEeecc-cchhhHHHHHHHHHHhhc-ccccceeEEeeeeeccceEEEEeecCC
Q 003605 415 RILGEGGFGLVYSGVLD-DGT--KVAVKVLKRV-DQQGGREFLAEVEMLSRL-HHRNLVKLIGICIEEQARCLVYELIPN 489 (808)
Q Consensus 415 ~~LG~G~fG~VYkg~l~-dg~--~VAVK~lk~~-~~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~~~~~~~~~LV~Ey~~~ 489 (808)
++||+|+||.||+|.+. ++. .+++|.++.. .....+.+.+|++++.++ +|+||++++++|...+..++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 36899999999999975 343 4688988753 344556899999999999 799999999999999999999999999
Q ss_pred CCcccccccccc------------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccc
Q 003605 490 GSVESHLHGVDK------------ESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFG 557 (808)
Q Consensus 490 GsL~~~L~~~~~------------~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFG 557 (808)
|+|.++++.... ....+.+.++++++.|++.||+|||+.+ ++||||||+|||+++++.+||+|||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nili~~~~~~kl~dfg 157 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQ---FIHRDLAARNILVGENYVAKIADFG 157 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccccceEEEcCCCeEEECCCC
Confidence 999999864321 1235889999999999999999999987 9999999999999999999999999
Q ss_pred cccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhcccc
Q 003605 558 LARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSR 636 (808)
Q Consensus 558 La~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~ 636 (808)
+++..... ........+..|+|||++....++.++|||||||++|||++ |..||..... .......
T Consensus 158 l~~~~~~~---~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~---~~~~~~~------- 224 (270)
T cd05047 158 LSRGQEVY---VKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTC---AELYEKL------- 224 (270)
T ss_pred Cccccchh---hhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCH---HHHHHHH-------
Confidence 98632111 11111223567999999988889999999999999999997 9999854221 1111111
Q ss_pred cccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHH
Q 003605 637 EGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLVC 688 (808)
Q Consensus 637 ~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~ 688 (808)
........+......+.+++.+|++.+|.+||++.|+++.|+.+.
T Consensus 225 -------~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 225 -------PQGYRLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred -------hCCCCCCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 000111112233457889999999999999999999999998775
No 126
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=5.9e-37 Score=321.63 Aligned_cols=246 Identities=27% Similarity=0.409 Sum_probs=196.2
Q ss_pred eeeecCcEEEEEEEee---CCCEEEEEEeeccc--chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecCCC
Q 003605 416 ILGEGGFGLVYSGVLD---DGTKVAVKVLKRVD--QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIPNG 490 (808)
Q Consensus 416 ~LG~G~fG~VYkg~l~---dg~~VAVK~lk~~~--~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~~G 490 (808)
.||+|+||.||+|.+. ++..+|+|+++... ....++|.+|+.++++++|+||+++++++. .+..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecCCCC
Confidence 5899999999999753 57889999986432 334578999999999999999999999985 45679999999999
Q ss_pred CccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccccccc
Q 003605 491 SVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRHI 570 (808)
Q Consensus 491 sL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~~ 570 (808)
+|.+++.. ...+++..+++++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++..........
T Consensus 81 ~L~~~l~~----~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~ 153 (257)
T cd05116 81 PLNKFLQK----NKHVTEKNITELVHQVSMGMKYLEETN---FVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYK 153 (257)
T ss_pred cHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---EeecccchhhEEEcCCCeEEECCCccccccCCCCCeee
Confidence 99999852 235899999999999999999999988 99999999999999999999999999976543222111
Q ss_pred -ccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCC
Q 003605 571 -STRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLG 648 (808)
Q Consensus 571 -~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~ 648 (808)
.....++..|+|||.+....++.++|||||||++|||++ |+.||..... ..+..... ....
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~---~~~~~~i~--------------~~~~ 216 (257)
T cd05116 154 AKTHGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG---NEVTQMIE--------------SGER 216 (257)
T ss_pred ecCCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHH--------------CCCC
Confidence 122234578999999988889999999999999999998 9999964322 11211111 1111
Q ss_pred CCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 003605 649 NDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKL 686 (808)
Q Consensus 649 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~ 686 (808)
...+......+.+++.+|++.+|++||++.+|++.|+.
T Consensus 217 ~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~ 254 (257)
T cd05116 217 MECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRN 254 (257)
T ss_pred CCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhc
Confidence 11233345678999999999999999999999999874
No 127
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=8.2e-37 Score=334.58 Aligned_cols=243 Identities=23% Similarity=0.355 Sum_probs=193.2
Q ss_pred eeeeecCcEEEEEEEee-CCCEEEEEEeecc---cchhhHHHHHHHHHHhhc-ccccceeEEeeeeeccceEEEEeecCC
Q 003605 415 RILGEGGFGLVYSGVLD-DGTKVAVKVLKRV---DQQGGREFLAEVEMLSRL-HHRNLVKLIGICIEEQARCLVYELIPN 489 (808)
Q Consensus 415 ~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~---~~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~~~~~~~~~LV~Ey~~~ 489 (808)
++||+|+||.||++... +++.||+|+++.. .....+.+.+|+.++.++ +|+||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 47999999999999965 6789999999753 233445678899998877 799999999999999999999999999
Q ss_pred CCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccccc
Q 003605 490 GSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRH 569 (808)
Q Consensus 490 GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~ 569 (808)
|+|.+++.. ...+++..+..|+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 ~~L~~~~~~----~~~l~~~~~~~i~~qi~~~l~~lH~~~---ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~--~ 151 (329)
T cd05618 81 GDLMFHMQR----QRKLPEEHARFYSAEISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG--D 151 (329)
T ss_pred CCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCCEEEeeCCccccccCCC--C
Confidence 999988852 346899999999999999999999998 9999999999999999999999999987532211 1
Q ss_pred cccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCC--cchhHHhhhhhcccccccccccCCCC
Q 003605 570 ISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPG--QENLVAWARPLLTSREGLERIIDPSL 647 (808)
Q Consensus 570 ~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~--~~~lv~w~~~~~~~~~~l~~ivD~~l 647 (808)
......||..|+|||++.+..++.++|||||||++|||++|+.||+...... ......|..... ....
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i---------~~~~- 221 (329)
T cd05618 152 TTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVI---------LEKQ- 221 (329)
T ss_pred ccccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHH---------hcCC-
Confidence 2234568999999999999999999999999999999999999996432211 111112221111 1111
Q ss_pred CCCCChhhHHHHHHHHHHccccCCCCCCCH
Q 003605 648 GNDVPFDSVAKVAAIASMCVQPEVQHRPFM 677 (808)
Q Consensus 648 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm 677 (808)
..++......+.+++.+||+.||++||+.
T Consensus 222 -~~~p~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 222 -IRIPRSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred -CCCCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 11333445678899999999999999983
No 128
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-37 Score=349.03 Aligned_cols=241 Identities=24% Similarity=0.366 Sum_probs=204.8
Q ss_pred HhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc---cchhhHHHHHHHHHHhhc-ccccceeEEeeeeeccceE
Q 003605 407 ATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV---DQQGGREFLAEVEMLSRL-HHRNLVKLIGICIEEQARC 481 (808)
Q Consensus 407 at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~---~~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~~~~~~~~~ 481 (808)
..++|...++||+|.||+|+++.++ +++.+|||.+++. .....+..+.|-+|+... +||.|++|+..|..++++|
T Consensus 366 ~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l~ 445 (694)
T KOG0694|consen 366 TLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHLF 445 (694)
T ss_pred cccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeEE
Confidence 4478999999999999999999976 6789999999874 344567788899998887 5999999999999999999
Q ss_pred EEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccc
Q 003605 482 LVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARS 561 (808)
Q Consensus 482 LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~ 561 (808)
+||||+.||++..+.+ ...+++..+.-+|..|+.||+|||+++ |||||||.+|||||.+|.+||+||||++.
T Consensus 446 fvmey~~Ggdm~~~~~-----~~~F~e~rarfyaAev~l~L~fLH~~~---IIYRDlKLdNiLLD~eGh~kiADFGlcKe 517 (694)
T KOG0694|consen 446 FVMEYVAGGDLMHHIH-----TDVFSEPRARFYAAEVVLGLQFLHENG---IIYRDLKLDNLLLDTEGHVKIADFGLCKE 517 (694)
T ss_pred EEEEecCCCcEEEEEe-----cccccHHHHHHHHHHHHHHHHHHHhcC---ceeeecchhheEEcccCcEEecccccccc
Confidence 9999999999655553 346888999999999999999999999 99999999999999999999999999986
Q ss_pred cccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccccccccc
Q 003605 562 AMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLER 641 (808)
Q Consensus 562 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ 641 (808)
... ....+...+||+.|||||++.+..|+.+.|.|+|||+|||||.|..||...+. ++
T Consensus 518 ~m~--~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gddE--------------------ee 575 (694)
T KOG0694|consen 518 GMG--QGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGDDE--------------------EE 575 (694)
T ss_pred cCC--CCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCCCH--------------------HH
Confidence 542 22345678999999999999999999999999999999999999999974321 12
Q ss_pred ccCCCCCC--CCChhhHHHHHHHHHHccccCCCCCCCH
Q 003605 642 IIDPSLGN--DVPFDSVAKVAAIASMCVQPEVQHRPFM 677 (808)
Q Consensus 642 ivD~~l~~--~~~~~~~~~l~~Li~~Cl~~dP~~RPsm 677 (808)
++|..+.. .+|.....+.+.|+.+.+.++|++|--+
T Consensus 576 ~FdsI~~d~~~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 576 VFDSIVNDEVRYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred HHHHHhcCCCCCCCcccHHHHHHHHHHhccCcccccCC
Confidence 22222222 2556667889999999999999999877
No 129
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=6.9e-37 Score=321.26 Aligned_cols=254 Identities=27% Similarity=0.442 Sum_probs=204.9
Q ss_pred hCCcceeeeeeecCcEEEEEEEeeCCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeec
Q 003605 408 TGNFDASRILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELI 487 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~ 487 (808)
.++|++.++||+|+||.||+|...+++.||+|.+.... ...++|.+|++++++++|+||+++++++. .+..+++|||+
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 82 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGS-MSPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYM 82 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCC-CcHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcC
Confidence 46788999999999999999998889999999987533 34568999999999999999999999874 46789999999
Q ss_pred CCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccc
Q 003605 488 PNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEES 567 (808)
Q Consensus 488 ~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~ 567 (808)
.+++|.++++.. ....+++.+++.++.|++.||+|||+.+ ++||||||+||++++++.++|+|||++........
T Consensus 83 ~~~~L~~~~~~~--~~~~~~~~~~~~i~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~ 157 (260)
T cd05067 83 ENGSLVDFLKTP--EGIKLTINKLIDMAAQIAEGMAFIERKN---YIHRDLRAANILVSETLCCKIADFGLARLIEDNEY 157 (260)
T ss_pred CCCCHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHhcCC---eecccccHHhEEEcCCCCEEEccCcceeecCCCCc
Confidence 999999998642 2346899999999999999999999988 99999999999999999999999999876532211
Q ss_pred cccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhcccccccccccCCC
Q 003605 568 RHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPS 646 (808)
Q Consensus 568 ~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~ 646 (808)
.......++..|+|||++....++.++||||||+++|||++ |+.||..... ..+..... ..
T Consensus 158 -~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~---~~~~~~~~--------------~~ 219 (260)
T cd05067 158 -TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTN---PEVIQNLE--------------RG 219 (260)
T ss_pred -ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCCh---HHHHHHHH--------------cC
Confidence 11122345678999999998889999999999999999999 9999964321 11111110 00
Q ss_pred CCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 003605 647 LGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKL 686 (808)
Q Consensus 647 l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~ 686 (808)
.....+......+.+++.+|++.+|++||++.++++.|+.
T Consensus 220 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 220 YRMPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred CCCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 0111122334679999999999999999999999999874
No 130
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.4e-37 Score=334.36 Aligned_cols=249 Identities=25% Similarity=0.372 Sum_probs=207.3
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeec-ccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEee
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKR-VDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~-~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
..|...++||+|.||.||||... .++.||+|++.- ......+++.+|+.+|..++++||.+++|.+..+..++++|||
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey 92 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY 92 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence 34666689999999999999965 788999999973 3455568899999999999999999999999999999999999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEE 566 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~ 566 (808)
|.+|++.+.|. ....+++..+.-|+.++..||.|||.++ .+|||||+.||||..+|.+||+|||.+.......
T Consensus 93 ~~gGsv~~lL~----~~~~~~E~~i~~ilre~l~~l~ylH~~~---kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~ 165 (467)
T KOG0201|consen 93 CGGGSVLDLLK----SGNILDEFEIAVILREVLKGLDYLHSEK---KIHRDIKAANILLSESGDVKLADFGVAGQLTNTV 165 (467)
T ss_pred hcCcchhhhhc----cCCCCccceeeeehHHHHHHhhhhhhcc---eecccccccceeEeccCcEEEEecceeeeeechh
Confidence 99999999995 3344578888889999999999999998 9999999999999999999999999997665433
Q ss_pred ccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCC
Q 003605 567 SRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPS 646 (808)
Q Consensus 567 ~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~ 646 (808)
.. ....+||+.|||||++....|+.|+||||||++.+||++|..|+....+... + -.+.+-.-|.
T Consensus 166 ~r--r~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrv---------l----flIpk~~PP~ 230 (467)
T KOG0201|consen 166 KR--RKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRV---------L----FLIPKSAPPR 230 (467)
T ss_pred hc--cccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceE---------E----EeccCCCCCc
Confidence 32 2567899999999999988999999999999999999999999975443100 0 0011112233
Q ss_pred CCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 647 LGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 647 l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
+.+ .....+.+++..||++||+.||++.++++.
T Consensus 231 L~~----~~S~~~kEFV~~CL~k~P~~RpsA~~LLKh 263 (467)
T KOG0201|consen 231 LDG----DFSPPFKEFVEACLDKNPEFRPSAKELLKH 263 (467)
T ss_pred ccc----ccCHHHHHHHHHHhhcCcccCcCHHHHhhh
Confidence 333 455679999999999999999999999863
No 131
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=6.6e-37 Score=339.54 Aligned_cols=202 Identities=26% Similarity=0.383 Sum_probs=174.6
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc---chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEE
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD---QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVY 484 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~---~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~ 484 (808)
++|+..+.||+|+||+||++... +++.||||+++... ......+.+|++++.+++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 47899999999999999999865 68899999997532 233457888999999999999999999999999999999
Q ss_pred eecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccc
Q 003605 485 ELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMD 564 (808)
Q Consensus 485 Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~ 564 (808)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+||||+.++.+||+|||+++....
T Consensus 81 E~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~aL~~lH~~g---ivHrDlKp~NILi~~~~~vkL~DFGla~~~~~ 153 (363)
T cd05628 81 EFLPGGDMMTLLMK----KDTLTEEETQFYIAETVLAIDSIHQLG---FIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKK 153 (363)
T ss_pred cCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEecCCCHHHeEECCCCCEEEeeccCcccccc
Confidence 99999999999963 346899999999999999999999988 99999999999999999999999999875432
Q ss_pred cccc---------------------------------ccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCC
Q 003605 565 EESR---------------------------------HISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGR 611 (808)
Q Consensus 565 ~~~~---------------------------------~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~ 611 (808)
.... .......||..|+|||++.+..++.++|||||||+||||++|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~ 233 (363)
T cd05628 154 AHRTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGY 233 (363)
T ss_pred cccccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCC
Confidence 1100 0112346999999999999999999999999999999999999
Q ss_pred CCCCCC
Q 003605 612 KPVDMT 617 (808)
Q Consensus 612 ~P~~~~ 617 (808)
.||...
T Consensus 234 ~Pf~~~ 239 (363)
T cd05628 234 PPFCSE 239 (363)
T ss_pred CCCCCC
Confidence 999643
No 132
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=5.5e-37 Score=324.52 Aligned_cols=269 Identities=26% Similarity=0.389 Sum_probs=205.7
Q ss_pred CCcceeeeeeecCcEEEEEEEee-----CCCEEEEEEeecccch-hhHHHHHHHHHHhhcccccceeEEeeeee--ccce
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-----DGTKVAVKVLKRVDQQ-GGREFLAEVEMLSRLHHRNLVKLIGICIE--EQAR 480 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-----dg~~VAVK~lk~~~~~-~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~--~~~~ 480 (808)
+.|...+.||+|+||.||++.+. ++..+|||.++..... ..++|.+|++++++++|+||+++++++.. ....
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 35667789999999999999864 3678999999854332 56789999999999999999999999877 5578
Q ss_pred EEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccc
Q 003605 481 CLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLAR 560 (808)
Q Consensus 481 ~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~ 560 (808)
++||||+++++|.++++.. ...++|..++.++.|++.||+|||+.+ ++||||||+||+++.++.++|+|||++.
T Consensus 84 ~lv~e~~~~~~l~~~l~~~---~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~ 157 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRH---RDQINLKRLLLFSSQICKGMDYLGSQR---YIHRDLAARNILVESEDLVKISDFGLAK 157 (284)
T ss_pred EEEEecCCCCCHHHHHHhC---ccccCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEccccccc
Confidence 9999999999999999642 235999999999999999999999988 9999999999999999999999999998
Q ss_pred cccccccc-ccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhc--cccc
Q 003605 561 SAMDEESR-HISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLL--TSRE 637 (808)
Q Consensus 561 ~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~--~~~~ 637 (808)
........ .......++..|++||++.+..++.++||||||+++|||+||+.|+....... ..++.... ....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~----~~~~~~~~~~~~~~ 233 (284)
T cd05038 158 VLPEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEF----LRMIGIAQGQMIVT 233 (284)
T ss_pred ccccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchh----ccccccccccccHH
Confidence 66422211 11112345567999999998899999999999999999999999875432211 00000000 0000
Q ss_pred ccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 003605 638 GLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLV 687 (808)
Q Consensus 638 ~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i 687 (808)
.+.+.+........+.....++.+++.+|++.+|++||++.||+++|+.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 234 RLLELLKEGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHHHHHHcCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 01111111111112223446799999999999999999999999999865
No 133
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=6.1e-37 Score=325.80 Aligned_cols=267 Identities=26% Similarity=0.377 Sum_probs=207.6
Q ss_pred ccCCHHHHHHHhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccchhhHHHHHHHHHHhhc-ccccceeEEeee
Q 003605 397 KTFSASEIEKATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQQGGREFLAEVEMLSRL-HHRNLVKLIGIC 474 (808)
Q Consensus 397 ~~fs~~el~~at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~~ 474 (808)
..+.++.+..+.++|++.+.||+|+||.||++... +++.+|+|.++... ....++.+|+.+++++ +|+||++++++|
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~ 84 (286)
T cd06638 6 KTIIFDSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMY 84 (286)
T ss_pred ceEEeecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeee
Confidence 34556677788999999999999999999999865 67899999886432 2346788999999999 699999999998
Q ss_pred e-----eccceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCC
Q 003605 475 I-----EEQARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDF 549 (808)
Q Consensus 475 ~-----~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~ 549 (808)
. .++..++||||+++++|.++++........+++..+..++.|+++||.|||+.+ ++||||||+||++++++
T Consensus 85 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~ 161 (286)
T cd06638 85 YKKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNK---TIHRDVKGNNILLTTEG 161 (286)
T ss_pred eecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCC---ccccCCCHHhEEECCCC
Confidence 4 335679999999999999988644334456899999999999999999999987 99999999999999999
Q ss_pred cceecccccccccccccccccccccccccccccchhhhc-----CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcch
Q 003605 550 TPKVSDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMT-----GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQEN 624 (808)
Q Consensus 550 ~vKL~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-----~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~ 624 (808)
.+||+|||+++...... .......|+..|+|||++.. ..++.++|||||||++|||++|+.|+...... ..
T Consensus 162 ~~kl~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~--~~ 237 (286)
T cd06638 162 GVKLVDFGVSAQLTSTR--LRRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPM--RA 237 (286)
T ss_pred CEEEccCCceeecccCC--CccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchh--HH
Confidence 99999999987653221 11233468999999998753 45788999999999999999999998643221 11
Q ss_pred hHHhhhhhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 003605 625 LVAWARPLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQAL 684 (808)
Q Consensus 625 lv~w~~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~L 684 (808)
+..+. ......+.+ +......+.+++.+|++.+|++||++.||++.+
T Consensus 238 ~~~~~------~~~~~~~~~-------~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~~ 284 (286)
T cd06638 238 LFKIP------RNPPPTLHQ-------PELWSNEFNDFIRKCLTKDYEKRPTVSDLLQHV 284 (286)
T ss_pred Hhhcc------ccCCCcccC-------CCCcCHHHHHHHHHHccCCcccCCCHHHHhhcc
Confidence 11100 000000111 111235688999999999999999999998753
No 134
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=1.2e-36 Score=320.34 Aligned_cols=248 Identities=26% Similarity=0.456 Sum_probs=196.6
Q ss_pred eeeecCcEEEEEEEee---CCCEEEEEEeeccc-chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecCCCC
Q 003605 416 ILGEGGFGLVYSGVLD---DGTKVAVKVLKRVD-QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIPNGS 491 (808)
Q Consensus 416 ~LG~G~fG~VYkg~l~---dg~~VAVK~lk~~~-~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~~Gs 491 (808)
.||+|+||.||+|++. ++..||+|+++... ....++|.+|++++++++|+||++++++|.. +..++||||+++|+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCCC
Confidence 3899999999999864 35579999987543 3334679999999999999999999998854 57899999999999
Q ss_pred ccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccccccc-
Q 003605 492 VESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRHI- 570 (808)
Q Consensus 492 L~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~~- 570 (808)
|.+++.. ....+++.++++++.|++.||+|||+++ ++||||||+|||++.++.+||+|||+++..........
T Consensus 81 L~~~l~~---~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~ 154 (257)
T cd05115 81 LNKFLSG---KKDEITVSNVVELMHQVSMGMKYLEGKN---FVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKA 154 (257)
T ss_pred HHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhcC---eeecccchheEEEcCCCcEEeccCCccccccCCccceec
Confidence 9999863 2346899999999999999999999988 99999999999999999999999999975433222111
Q ss_pred ccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCC
Q 003605 571 STRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGN 649 (808)
Q Consensus 571 ~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~ 649 (808)
.....++..|+|||.+....++.++|||||||++|||++ |+.||..... ..+.... ......
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~---~~~~~~~--------------~~~~~~ 217 (257)
T cd05115 155 RSAGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKG---PEVMSFI--------------EQGKRL 217 (257)
T ss_pred cCCCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCH---HHHHHHH--------------HCCCCC
Confidence 112234578999999988889999999999999999996 9999864321 1111111 111111
Q ss_pred CCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 003605 650 DVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLV 687 (808)
Q Consensus 650 ~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i 687 (808)
..+.....++.+++.+||..+|++||++.+|.+.|+.+
T Consensus 218 ~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 218 DCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 22334457888999999999999999999999999864
No 135
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=9.4e-37 Score=319.58 Aligned_cols=252 Identities=23% Similarity=0.344 Sum_probs=202.0
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc-----chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEE
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD-----QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCL 482 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~-----~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~L 482 (808)
++|.+.+.||+|++|.||++... +++.||+|.++... ....+.+.+|++++++++|+||+++++++.+++..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 57889999999999999999864 68999999986422 1234578899999999999999999999999999999
Q ss_pred EEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccc
Q 003605 483 VYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSA 562 (808)
Q Consensus 483 V~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~ 562 (808)
|+||+++++|.+++.. ...+++..+.+++.+++.||+|||+.+ |+||||+|+||+++++++++|+|||+++..
T Consensus 82 v~e~~~~~~l~~~~~~----~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nilv~~~~~~~l~dfg~~~~~ 154 (263)
T cd06625 82 FMEYMPGGSVKDQLKA----YGALTETVTRKYTRQILEGVEYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASKRL 154 (263)
T ss_pred EEEECCCCcHHHHHHH----hCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeecccceec
Confidence 9999999999999853 235889999999999999999999998 999999999999999999999999998754
Q ss_pred cccccccc-ccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccccccccc
Q 003605 563 MDEESRHI-STRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLER 641 (808)
Q Consensus 563 ~~~~~~~~-~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ 641 (808)
........ .....++..|+|||++.+..++.++||||||+++|||++|+.||..... .....+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~---~~~~~~~------------ 219 (263)
T cd06625 155 QTICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEA---MAAIFKI------------ 219 (263)
T ss_pred cccccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccch---HHHHHHH------------
Confidence 32211111 1234577899999999998899999999999999999999999864321 1111110
Q ss_pred ccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 642 IIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 642 ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
.........+......+.+++.+||..+|++||++.|+++.
T Consensus 220 -~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 220 -ATQPTNPQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred -hccCCCCCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 00111112233345678999999999999999999999864
No 136
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=1.5e-36 Score=322.35 Aligned_cols=259 Identities=26% Similarity=0.451 Sum_probs=206.3
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCC----EEEEEEeeccc-chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEE
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGT----KVAVKVLKRVD-QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCL 482 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~----~VAVK~lk~~~-~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~L 482 (808)
++|++.+.||+|+||.||+|... +|+ .+|+|.++... .....++.+|++++++++|+||++++++|.. ...++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 56778899999999999999865 343 58999887543 3445789999999999999999999999987 78899
Q ss_pred EEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccc
Q 003605 483 VYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSA 562 (808)
Q Consensus 483 V~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~ 562 (808)
|+||+++|+|.++++. ....+++..++.++.|++.||+|||+.+ ++||||||+|||+++++.+||+|||+++..
T Consensus 86 v~e~~~~g~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~LH~~~---i~H~di~p~nil~~~~~~~kL~dfg~~~~~ 159 (279)
T cd05057 86 ITQLMPLGCLLDYVRN---HKDNIGSQYLLNWCVQIAKGMSYLEEKR---LVHRDLAARNVLVKTPQHVKITDFGLAKLL 159 (279)
T ss_pred EEecCCCCcHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHhCC---EEecccCcceEEEcCCCeEEECCCcccccc
Confidence 9999999999999963 2335899999999999999999999987 999999999999999999999999999865
Q ss_pred ccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhccccccccc
Q 003605 563 MDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLER 641 (808)
Q Consensus 563 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ 641 (808)
.............++..|+|||.+....++.++|||||||++|||++ |+.||+.... .++..... . ..
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~---~~~~~~~~---~-~~---- 228 (279)
T cd05057 160 DVDEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA---VEIPDLLE---K-GE---- 228 (279)
T ss_pred cCcccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH---HHHHHHHh---C-CC----
Confidence 43222111122234568999999988899999999999999999999 9999865322 12222111 0 00
Q ss_pred ccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHhh
Q 003605 642 IIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLVCNEC 691 (808)
Q Consensus 642 ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~~~~ 691 (808)
....+..+...+.+++.+||..+|++||++.++++.|+.+.++.
T Consensus 229 ------~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05057 229 ------RLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARDP 272 (279)
T ss_pred ------CCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhCC
Confidence 01112223457889999999999999999999999999886643
No 137
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=1.2e-36 Score=320.93 Aligned_cols=258 Identities=24% Similarity=0.397 Sum_probs=204.7
Q ss_pred HHHHHhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceE
Q 003605 403 EIEKATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARC 481 (808)
Q Consensus 403 el~~at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~ 481 (808)
|++.+++++....+||+|+||.||+|... ++..||+|.+........+.+.+|++++++++|+||+++++++..++..+
T Consensus 2 ~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~ 81 (268)
T cd06624 2 EYEYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFK 81 (268)
T ss_pred CcccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEE
Confidence 34567788888899999999999999865 67889999988766666778999999999999999999999999999999
Q ss_pred EEEeecCCCCccccccccccCCCCC--CHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecC-CCcceeccccc
Q 003605 482 LVYELIPNGSVESHLHGVDKESAPL--GWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEH-DFTPKVSDFGL 558 (808)
Q Consensus 482 LV~Ey~~~GsL~~~L~~~~~~~~~L--~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~-~~~vKL~DFGL 558 (808)
+|+||+++++|.++++.. ...+ ++..+..++.|++.||+|||+.+ |+||||||+||+++. ++.++|+|||+
T Consensus 82 lv~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~h~dl~p~nil~~~~~~~~~l~dfg~ 155 (268)
T cd06624 82 IFMEQVPGGSLSALLRSK---WGPLKDNEQTIIFYTKQILEGLKYLHDNQ---IVHRDIKGDNVLVNTYSGVVKISDFGT 155 (268)
T ss_pred EEEecCCCCCHHHHHHHh---cccCCCcHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCeEEEecchh
Confidence 999999999999999632 1234 78889999999999999999988 999999999999986 67999999999
Q ss_pred ccccccccccccccccccccccccchhhhcCC--CccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccc
Q 003605 559 ARSAMDEESRHISTRVMGTFGYVAPEYAMTGH--LLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSR 636 (808)
Q Consensus 559 a~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~--~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~ 636 (808)
+....... .......++..|+|||++.... ++.++||||||+++|||++|+.||..... .....|......
T Consensus 156 ~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~---~~~~~~~~~~~~-- 228 (268)
T cd06624 156 SKRLAGIN--PCTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGE---PQAAMFKVGMFK-- 228 (268)
T ss_pred heecccCC--CccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccC---hhhhHhhhhhhc--
Confidence 87543221 1122345788999999986643 78899999999999999999999864321 111111110000
Q ss_pred cccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 637 EGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 637 ~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
.....+.....++.+++.+||+.+|++||++.||++.
T Consensus 229 ----------~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 265 (268)
T cd06624 229 ----------IHPEIPESLSAEAKNFILRCFEPDPDKRASAHDLLQD 265 (268)
T ss_pred ----------cCCCCCcccCHHHHHHHHHHcCCCchhCCCHHHHHhC
Confidence 0111233344678899999999999999999999763
No 138
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=9.7e-37 Score=319.53 Aligned_cols=256 Identities=29% Similarity=0.456 Sum_probs=206.9
Q ss_pred HhCCcceeeeeeecCcEEEEEEEeeCCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEee
Q 003605 407 ATGNFDASRILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 407 at~~f~~~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
..++|.+.+.||+|+||.||+|..+++..||||.++.. ....+++.+|++++++++|+||+++++++......++||||
T Consensus 4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 82 (261)
T cd05034 4 PRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPG-TMSPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEY 82 (261)
T ss_pred chhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCC-ccCHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEec
Confidence 45789999999999999999999888889999998753 23457899999999999999999999999988899999999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEE 566 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~ 566 (808)
+++++|.++++... ...+++.+++.++.+++.||+|||+.+ ++|+||||+||++++++.+||+|||+++......
T Consensus 83 ~~~~~L~~~i~~~~--~~~~~~~~~~~~~~~i~~al~~lh~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~ 157 (261)
T cd05034 83 MSKGSLLDFLKSGE--GKKLRLPQLVDMAAQIAEGMAYLESRN---YIHRDLAARNILVGENLVCKIADFGLARLIEDDE 157 (261)
T ss_pred cCCCCHHHHHhccc--cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcchheEEEcCCCCEEECccccceeccchh
Confidence 99999999997432 246899999999999999999999998 9999999999999999999999999987654311
Q ss_pred ccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhcccccccccccCC
Q 003605 567 SRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDP 645 (808)
Q Consensus 567 ~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~ 645 (808)
........++..|+|||.+.+..++.++|||||||++|||+| |+.||..... .........
T Consensus 158 -~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~---~~~~~~~~~-------------- 219 (261)
T cd05034 158 -YTAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTN---REVLEQVER-------------- 219 (261)
T ss_pred -hhhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHHc--------------
Confidence 111112234568999999998889999999999999999999 9999853221 111111100
Q ss_pred CCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 003605 646 SLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKL 686 (808)
Q Consensus 646 ~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~ 686 (808)
.+....+.+....+.+++.+|++.+|++||+++++++.|+.
T Consensus 220 ~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 220 GYRMPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred CCCCCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 00111122234678999999999999999999999998874
No 139
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=1.1e-36 Score=332.19 Aligned_cols=241 Identities=22% Similarity=0.299 Sum_probs=194.9
Q ss_pred CcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc---chhhHHHHHHHHHHhhc-ccccceeEEeeeeeccceEEEE
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD---QQGGREFLAEVEMLSRL-HHRNLVKLIGICIEEQARCLVY 484 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~---~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~~~~~~~~~LV~ 484 (808)
+|++.+.||+|+||.||+|... +++.||||+++... ....+.+..|.+++..+ +|++|+++++++.+.+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 5788999999999999999866 67899999997532 23345677788888877 5899999999999999999999
Q ss_pred eecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccc
Q 003605 485 ELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMD 564 (808)
Q Consensus 485 Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~ 564 (808)
||+++|+|.+++.. ...+++.+++.++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++....
T Consensus 81 E~~~~g~L~~~~~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~ 153 (323)
T cd05616 81 EYVNGGDLMYQIQQ----VGRFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENMW 153 (323)
T ss_pred cCCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEecCCCHHHeEECCCCcEEEccCCCceecCC
Confidence 99999999998853 235889999999999999999999988 99999999999999999999999999875432
Q ss_pred ccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccC
Q 003605 565 EESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIID 644 (808)
Q Consensus 565 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD 644 (808)
.. .......||+.|+|||++.+..++.++|||||||++|||+||+.||..... ..+... +.+
T Consensus 154 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~---~~~~~~-------------i~~ 215 (323)
T cd05616 154 DG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE---DELFQS-------------IME 215 (323)
T ss_pred CC--CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCH---HHHHHH-------------HHh
Confidence 11 122345689999999999999999999999999999999999999964321 111111 111
Q ss_pred CCCCCCCChhhHHHHHHHHHHccccCCCCCCCH
Q 003605 645 PSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFM 677 (808)
Q Consensus 645 ~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm 677 (808)
.. ..++.....++.+++.+|++.+|++|++.
T Consensus 216 ~~--~~~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 216 HN--VAYPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred CC--CCCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 11 11233345678999999999999999985
No 140
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=6.3e-37 Score=341.28 Aligned_cols=254 Identities=20% Similarity=0.262 Sum_probs=200.8
Q ss_pred HhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc---cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEE
Q 003605 407 ATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV---DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCL 482 (808)
Q Consensus 407 at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~---~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~L 482 (808)
..++|++.++||+|+||.||++... +++.||+|+++.. .....+.+.+|+++++.++|+||+++++++.+++..++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 4568999999999999999999875 6889999999742 22334567899999999999999999999999999999
Q ss_pred EEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccc
Q 003605 483 VYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSA 562 (808)
Q Consensus 483 V~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~ 562 (808)
||||+++|+|.++++. ..+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++..
T Consensus 121 v~Ey~~gg~L~~~l~~-----~~l~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NILl~~~~~~kL~DfG~~~~~ 192 (370)
T cd05596 121 VMEYMPGGDLVNLMSN-----YDIPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADFGTCMKM 192 (370)
T ss_pred EEcCCCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEcCCCCEEEEeccceeec
Confidence 9999999999999853 24778888899999999999999988 999999999999999999999999999764
Q ss_pred ccccccccccccccccccccchhhhcC----CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccc
Q 003605 563 MDEESRHISTRVMGTFGYVAPEYAMTG----HLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREG 638 (808)
Q Consensus 563 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~----~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~ 638 (808)
.... ........||+.|+|||++.+. .++.++|||||||+||||++|+.||..... .............
T Consensus 193 ~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~------~~~~~~i~~~~~~ 265 (370)
T cd05596 193 DANG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL------VGTYSKIMDHKNS 265 (370)
T ss_pred cCCC-cccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCH------HHHHHHHHcCCCc
Confidence 3221 1112345699999999998653 478999999999999999999999964321 1111111110000
Q ss_pred cccccCCCCCCCCChhhHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 003605 639 LERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQH--RPFMGEVVQA 683 (808)
Q Consensus 639 l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~--RPsm~eVl~~ 683 (808)
+.-.........+.+++.+||+.+|++ |+++.|+++.
T Consensus 266 --------~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 266 --------LTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred --------CCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 000011123567889999999999988 9999999765
No 141
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=6e-37 Score=332.29 Aligned_cols=277 Identities=25% Similarity=0.353 Sum_probs=212.0
Q ss_pred CCcccCCHHHHHHHhCCcceeeeeeecCcEEEEEEEeeCCCEEEEEEeecccchhhHHHHHHHHHHhh--cccccceeEE
Q 003605 394 GSAKTFSASEIEKATGNFDASRILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQGGREFLAEVEMLSR--LHHRNLVKLI 471 (808)
Q Consensus 394 ~s~~~fs~~el~~at~~f~~~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~--L~HpNIV~L~ 471 (808)
|++....+--......+..+.+.||+|.||.||+|.++ |+.||||++... +++.+.+|.+|++. |+|+||+.|+
T Consensus 196 GSGSGlplLVQRTiarqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~sr---dE~SWfrEtEIYqTvmLRHENILgFI 271 (513)
T KOG2052|consen 196 GSGSGLPLLVQRTIARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSR---DERSWFRETEIYQTVMLRHENILGFI 271 (513)
T ss_pred CCCCCchhHhHHhhhheeEEEEEecCccccceeecccc-CCceEEEEeccc---chhhhhhHHHHHHHHHhccchhhhhh
Confidence 33444455555667788999999999999999999998 899999999743 34678899999986 5999999999
Q ss_pred eeeeec----cceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh-----cCCCcEEeeeecccC
Q 003605 472 GICIEE----QARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHE-----DSSPRVIHRDFKSSN 542 (808)
Q Consensus 472 g~~~~~----~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~-----~~~p~IiHrDIKpsN 542 (808)
+.-..+ .+++||.+|.++|||.|||. +..++-+..++++..+|.||++||. +++|.|.|||||+.|
T Consensus 272 aaD~~~~gs~TQLwLvTdYHe~GSL~DyL~-----r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKN 346 (513)
T KOG2052|consen 272 AADNKDNGSWTQLWLVTDYHEHGSLYDYLN-----RNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKN 346 (513)
T ss_pred hccccCCCceEEEEEeeecccCCcHHHHHh-----hccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhcccccccc
Confidence 986544 36799999999999999995 2469999999999999999999995 468999999999999
Q ss_pred eeecCCCcceeccccccccccccc-cc-ccccccccccccccchhhhcC----CC--ccccceeeHHHHHHHHHhC----
Q 003605 543 ILLEHDFTPKVSDFGLARSAMDEE-SR-HISTRVMGTFGYVAPEYAMTG----HL--LVKSDVYSYGVVILELLSG---- 610 (808)
Q Consensus 543 ILLd~~~~vKL~DFGLa~~~~~~~-~~-~~~~~~~Gt~~Y~APE~l~~~----~~--s~kSDVwSfGvvLlELlTG---- 610 (808)
||+..++.+.|+|+|||-...... .- ......+||.+|||||++... .+ -..+||||||+|+||++..
T Consensus 347 ILVKkn~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~g 426 (513)
T KOG2052|consen 347 ILVKKNGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESG 426 (513)
T ss_pred EEEccCCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcC
Confidence 999999999999999997544321 11 112346799999999998643 22 2358999999999999763
Q ss_pred ------CCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCCC-----CChhhHHHHHHHHHHccccCCCCCCCHHH
Q 003605 611 ------RKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGND-----VPFDSVAKVAAIASMCVQPEVQHRPFMGE 679 (808)
Q Consensus 611 ------~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~~-----~~~~~~~~l~~Li~~Cl~~dP~~RPsm~e 679 (808)
+.||....+.+ -..++..+-+-..+++.. ...+.+..+.+|++.||..+|.-|-|+--
T Consensus 427 gi~eey~~Pyyd~Vp~D-----------Ps~eeMrkVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALr 495 (513)
T KOG2052|consen 427 GIVEEYQLPYYDVVPSD-----------PSFEEMRKVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALR 495 (513)
T ss_pred CEehhhcCCcccCCCCC-----------CCHHHHhcceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHH
Confidence 23443222211 111111111222223222 23578899999999999999999999999
Q ss_pred HHHHHHHHHHh
Q 003605 680 VVQALKLVCNE 690 (808)
Q Consensus 680 Vl~~Le~i~~~ 690 (808)
|.+.|.++.+.
T Consensus 496 iKKtl~~l~~~ 506 (513)
T KOG2052|consen 496 IKKTLAKLSNS 506 (513)
T ss_pred HHHHHHHHhcC
Confidence 99999888653
No 142
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=1.3e-36 Score=316.67 Aligned_cols=248 Identities=30% Similarity=0.471 Sum_probs=199.4
Q ss_pred eeeeecCcEEEEEEEeeCCCEEEEEEeecccc-hhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecCCCCcc
Q 003605 415 RILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQ-QGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIPNGSVE 493 (808)
Q Consensus 415 ~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~-~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~~GsL~ 493 (808)
++||+|+||.||++.+.+++.||+|.++.... ...++|.+|++++++++|+||+++++++.+.+..++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 46999999999999987799999999875433 35678999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccccccccc
Q 003605 494 SHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRHISTR 573 (808)
Q Consensus 494 ~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~~~~~ 573 (808)
++++.. ...+++..++.++.+++.||+|||+++ ++||||||+|||++.++.+||+|||+++.............
T Consensus 81 ~~l~~~---~~~~~~~~~~~~~~~~~~~l~~lH~~~---i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~ 154 (251)
T cd05041 81 TFLRKK---KNRLTVKKLLQMSLDAAAGMEYLESKN---CIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGL 154 (251)
T ss_pred HHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---EehhhcCcceEEEcCCCcEEEeeccccccccCCcceecccc
Confidence 998632 235889999999999999999999988 99999999999999999999999999875432111111112
Q ss_pred cccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCCCCC
Q 003605 574 VMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGNDVP 652 (808)
Q Consensus 574 ~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~~~~ 652 (808)
...+..|+|||++.++.++.++|||||||++|||+| |..||...... ...... ........+
T Consensus 155 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~---~~~~~~--------------~~~~~~~~~ 217 (251)
T cd05041 155 KQIPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ---QTRERI--------------ESGYRMPAP 217 (251)
T ss_pred CcceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH---HHHHHH--------------hcCCCCCCC
Confidence 234567999999998899999999999999999999 88888543221 111111 001111122
Q ss_pred hhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 003605 653 FDSVAKVAAIASMCVQPEVQHRPFMGEVVQALK 685 (808)
Q Consensus 653 ~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le 685 (808)
......+.+++.+|++.+|++||++.||++.|+
T Consensus 218 ~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 218 QLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred ccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 334568999999999999999999999999885
No 143
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=1.7e-36 Score=318.77 Aligned_cols=253 Identities=28% Similarity=0.433 Sum_probs=202.8
Q ss_pred CCcceeeeeeecCcEEEEEEEeeCCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecC
Q 003605 409 GNFDASRILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIP 488 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~ 488 (808)
++|.+.+.||+|+||.||+|...++..+|+|++.... ...+.|.+|++++++++|+|++++++++. .+..++||||+.
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 83 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMG 83 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCC
Confidence 5688899999999999999998877789999886532 33467899999999999999999999875 456799999999
Q ss_pred CCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccccc
Q 003605 489 NGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESR 568 (808)
Q Consensus 489 ~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~ 568 (808)
+|+|.++++.. ....++|..++.++.+++.||+|||+.+ ++||||||+||++++++.++|+|||+++........
T Consensus 84 ~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~al~~lH~~~---i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~ 158 (260)
T cd05069 84 KGSLLDFLKEG--DGKYLKLPQLVDMAAQIADGMAYIERMN---YIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYT 158 (260)
T ss_pred CCCHHHHHhhC--CCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccCcceEEEcCCCeEEECCCccceEccCCccc
Confidence 99999999743 2345899999999999999999999988 999999999999999999999999999765332211
Q ss_pred ccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCC
Q 003605 569 HISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSL 647 (808)
Q Consensus 569 ~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l 647 (808)
......++..|+|||++.+..++.++|||||||++|||+| |+.||..... .....+... . .
T Consensus 159 -~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~---~~~~~~~~~----~----------~ 220 (260)
T cd05069 159 -ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVN---REVLEQVER----G----------Y 220 (260)
T ss_pred -ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHHc----C----------C
Confidence 1122345678999999998899999999999999999999 8989864321 111111110 0 0
Q ss_pred CCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 003605 648 GNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKL 686 (808)
Q Consensus 648 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~ 686 (808)
....+......+.+++.+|++.+|++||++++|++.|++
T Consensus 221 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 221 RMPCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred CCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 011222345679999999999999999999999999874
No 144
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=1.3e-36 Score=320.77 Aligned_cols=256 Identities=27% Similarity=0.441 Sum_probs=204.1
Q ss_pred CCcceeeeeeecCcEEEEEEEee-C---CCEEEEEEeeccc-chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEE
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-D---GTKVAVKVLKRVD-QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLV 483 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-d---g~~VAVK~lk~~~-~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV 483 (808)
++|++.+.||+|+||.||+|... + +..+|+|.++... ....+.|.+|+.++.+++|+||+++++++.+++..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 46888899999999999999864 2 3379999987532 33456899999999999999999999999999999999
Q ss_pred EeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccc
Q 003605 484 YELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAM 563 (808)
Q Consensus 484 ~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~ 563 (808)
|||+++++|.++++.. ...+++.+++.|+.|++.||+|||+.+ ++||||||+|||++.++.++|+|||+++...
T Consensus 84 ~e~~~~~~L~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lH~~~---i~h~dlkp~nili~~~~~~~l~dfg~~~~~~ 157 (267)
T cd05066 84 TEYMENGSLDAFLRKH---DGQFTVIQLVGMLRGIASGMKYLSDMG---YVHRDLAARNILVNSNLVCKVSDFGLSRVLE 157 (267)
T ss_pred EEcCCCCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---EeehhhchhcEEECCCCeEEeCCCCcccccc
Confidence 9999999999999632 245899999999999999999999988 9999999999999999999999999998654
Q ss_pred ccccccc-ccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhccccccccc
Q 003605 564 DEESRHI-STRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLER 641 (808)
Q Consensus 564 ~~~~~~~-~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ 641 (808)
....... .....++..|+|||++.+..++.++|||||||++||+++ |..||..... .....+... .
T Consensus 158 ~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~---~~~~~~~~~----~----- 225 (267)
T cd05066 158 DDPEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSN---QDVIKAIEE----G----- 225 (267)
T ss_pred cccceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCH---HHHHHHHhC----C-----
Confidence 3221111 111223568999999998899999999999999999887 9999864322 122222111 0
Q ss_pred ccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 003605 642 IIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLV 687 (808)
Q Consensus 642 ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i 687 (808)
.....+......+.+++.+|++.+|++||+|.++++.|+.+
T Consensus 226 -----~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 226 -----YRLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred -----CcCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 00111223346788999999999999999999999999864
No 145
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=1.1e-36 Score=331.59 Aligned_cols=237 Identities=25% Similarity=0.324 Sum_probs=188.5
Q ss_pred eeeeecCcEEEEEEEee-CCCEEEEEEeeccc---chhhHHHHHHHH-HHhhcccccceeEEeeeeeccceEEEEeecCC
Q 003605 415 RILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD---QQGGREFLAEVE-MLSRLHHRNLVKLIGICIEEQARCLVYELIPN 489 (808)
Q Consensus 415 ~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~---~~~~~~f~~Ei~-iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~~ 489 (808)
++||+|+||.||+|+.. +++.||+|++.... ....+++.+|+. +++.++|+||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 47999999999999975 68899999997422 223345666655 57889999999999999999999999999999
Q ss_pred CCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccccc
Q 003605 490 GSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRH 569 (808)
Q Consensus 490 GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~ 569 (808)
|+|.+++.. ...+.+..+..++.|++.||+|||+.+ |+||||||+||||+.++.+||+|||+++...... .
T Consensus 81 ~~L~~~l~~----~~~~~~~~~~~~~~qi~~~L~~lH~~~---ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~--~ 151 (321)
T cd05603 81 GELFFHLQR----ERCFLEPRARFYAAEVASAIGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE--E 151 (321)
T ss_pred CCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEccCCCCccCCCCC--C
Confidence 999888852 345788889999999999999999988 9999999999999999999999999987532211 2
Q ss_pred cccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCC
Q 003605 570 ISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGN 649 (808)
Q Consensus 570 ~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~ 649 (808)
......||..|+|||++.+..++.++|||||||++|||++|+.||..... ...... +.... .
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------~~~~~~----------i~~~~--~ 213 (321)
T cd05603 152 TTSTFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV------SQMYDN----------ILHKP--L 213 (321)
T ss_pred ccccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH------HHHHHH----------HhcCC--C
Confidence 22345689999999999988999999999999999999999999964321 111111 11111 1
Q ss_pred CCChhhHHHHHHHHHHccccCCCCCCCHH
Q 003605 650 DVPFDSVAKVAAIASMCVQPEVQHRPFMG 678 (808)
Q Consensus 650 ~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~ 678 (808)
..+......+.+++.+||+.+|++|++..
T Consensus 214 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 214 QLPGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred CCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 12334456789999999999999999764
No 146
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=1.1e-36 Score=320.59 Aligned_cols=255 Identities=23% Similarity=0.340 Sum_probs=201.8
Q ss_pred hCCcceeeeeeecCcEEEEEEEe-eCCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEee
Q 003605 408 TGNFDASRILGEGGFGLVYSGVL-DDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l-~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
.++|++.+.||+|+||.||+|+. .+++.||+|+++.........+.+|+.++.+++|+||+++++++..++..++|+||
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 35688899999999999999996 47889999999755445556788999999999999999999999999999999999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEE 566 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~ 566 (808)
+++++|.++++. ...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 88 ~~~~~L~~~~~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~ 160 (267)
T cd06646 88 CGGGSLQDIYHV----TGPLSELQIAYVCRETLQGLAYLHSKG---KMHRDIKGANILLTDNGDVKLADFGVAAKITATI 160 (267)
T ss_pred CCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCCEEECcCccceeecccc
Confidence 999999999863 235899999999999999999999988 9999999999999999999999999997653221
Q ss_pred ccccccccccccccccchhhh---cCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccccccccccc
Q 003605 567 SRHISTRVMGTFGYVAPEYAM---TGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERII 643 (808)
Q Consensus 567 ~~~~~~~~~Gt~~Y~APE~l~---~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~iv 643 (808)
. ......|+..|+|||.+. ...++.++|||||||++|||++|+.|+....... ....+.. . .+.
T Consensus 161 ~--~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~--~~~~~~~------~---~~~ 227 (267)
T cd06646 161 A--KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR--ALFLMSK------S---NFQ 227 (267)
T ss_pred c--ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhh--hheeeec------C---CCC
Confidence 1 112345788999999874 3457889999999999999999999985332111 0000000 0 000
Q ss_pred CCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 003605 644 DPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQAL 684 (808)
Q Consensus 644 D~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~L 684 (808)
.+.+.. .......+.+++.+||+.+|++||++++|++.|
T Consensus 228 ~~~~~~--~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~l 266 (267)
T cd06646 228 PPKLKD--KTKWSSTFHNFVKISLTKNPKKRPTAERLLTHL 266 (267)
T ss_pred CCCCcc--ccccCHHHHHHHHHHhhCChhhCcCHHHHhcCC
Confidence 111110 112346789999999999999999999998754
No 147
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=1.3e-36 Score=331.22 Aligned_cols=242 Identities=24% Similarity=0.319 Sum_probs=194.3
Q ss_pred eeeeecCcEEEEEEEee-CCCEEEEEEeecc---cchhhHHHHHHHHHHhhc-ccccceeEEeeeeeccceEEEEeecCC
Q 003605 415 RILGEGGFGLVYSGVLD-DGTKVAVKVLKRV---DQQGGREFLAEVEMLSRL-HHRNLVKLIGICIEEQARCLVYELIPN 489 (808)
Q Consensus 415 ~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~---~~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~~~~~~~~~LV~Ey~~~ 489 (808)
++||+|+||.||+|+.. +++.||||+++.. .....+.+..|++++..+ +|+||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 46999999999999875 5789999999753 233445678899999876 799999999999999999999999999
Q ss_pred CCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccccc
Q 003605 490 GSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRH 569 (808)
Q Consensus 490 GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~ 569 (808)
|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 ~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~--~ 151 (321)
T cd05591 81 GDLMFQIQR----SRKFDEPRSRFYAAEVTLALMFLHRHG---VIYRDLKLDNILLDAEGHCKLADFGMCKEGILNG--V 151 (321)
T ss_pred CcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeecccceecccCC--c
Confidence 999988853 235889999999999999999999998 9999999999999999999999999987543222 1
Q ss_pred cccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCC
Q 003605 570 ISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGN 649 (808)
Q Consensus 570 ~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~ 649 (808)
......||..|+|||++.+..++.++|||||||++|||++|+.||..... ..+... .... ..
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~---~~~~~~---i~~~----------~~-- 213 (321)
T cd05591 152 TTTTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNE---DDLFES---ILHD----------DV-- 213 (321)
T ss_pred cccccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCH---HHHHHH---HHcC----------CC--
Confidence 22345689999999999998999999999999999999999999974321 111111 1110 00
Q ss_pred CCChhhHHHHHHHHHHccccCCCCCC-------CHHHHHHH
Q 003605 650 DVPFDSVAKVAAIASMCVQPEVQHRP-------FMGEVVQA 683 (808)
Q Consensus 650 ~~~~~~~~~l~~Li~~Cl~~dP~~RP-------sm~eVl~~ 683 (808)
..+......+.+++.+||+.||++|+ ++.++++.
T Consensus 214 ~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~h 254 (321)
T cd05591 214 LYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQH 254 (321)
T ss_pred CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhcC
Confidence 01122345788999999999999999 67777644
No 148
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=1.2e-36 Score=339.60 Aligned_cols=250 Identities=24% Similarity=0.298 Sum_probs=193.1
Q ss_pred CcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc---chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEe
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD---QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYE 485 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~---~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~E 485 (808)
+|+..++||+|+||+||+|+.. +++.||||++.... ....+.+.+|++++++++|+||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 5889999999999999999864 68899999997532 2345678899999999999999999999999999999999
Q ss_pred ecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccc
Q 003605 486 LIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDE 565 (808)
Q Consensus 486 y~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~ 565 (808)
|+++|+|.+++.. ...+++.....++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.+...
T Consensus 82 ~~~gg~L~~~l~~----~~~~~e~~~~~~~~qi~~al~~lH~~~---ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~ 154 (382)
T cd05625 82 YIPGGDMMSLLIR----MGIFPEDLARFYIAELTCAVESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 154 (382)
T ss_pred CCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEEeECCCCcccccc
Confidence 9999999999853 235788889999999999999999998 999999999999999999999999997532100
Q ss_pred c---------------------------------------------ccccccccccccccccchhhhcCCCccccceeeH
Q 003605 566 E---------------------------------------------SRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSY 600 (808)
Q Consensus 566 ~---------------------------------------------~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSf 600 (808)
. .........||+.|+|||++.+..++.++|||||
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSl 234 (382)
T cd05625 155 HDSKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSV 234 (382)
T ss_pred ccccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEec
Confidence 0 0001123468999999999999999999999999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCc-chhHHhhhhhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCC---
Q 003605 601 GVVILELLSGRKPVDMTQPPGQ-ENLVAWARPLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPF--- 676 (808)
Q Consensus 601 GvvLlELlTG~~P~~~~~~~~~-~~lv~w~~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs--- 676 (808)
||+||||++|+.||........ ..+..|. ..+...........+.+++.+|+ .+|++|++
T Consensus 235 Gvil~elltG~~Pf~~~~~~~~~~~i~~~~---------------~~~~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~ 298 (382)
T cd05625 235 GVILYEMLVGQPPFLAQTPLETQMKVINWQ---------------TSLHIPPQAKLSPEASDLIIKLC-RGPEDRLGKNG 298 (382)
T ss_pred hHHHHHHHhCCCCCCCCCHHHHHHHHHccC---------------CCcCCCCcccCCHHHHHHHHHHc-cCHhHcCCCCC
Confidence 9999999999999965322100 0011110 00000011122345666666665 49999997
Q ss_pred HHHHHH
Q 003605 677 MGEVVQ 682 (808)
Q Consensus 677 m~eVl~ 682 (808)
+.|+++
T Consensus 299 ~~ei~~ 304 (382)
T cd05625 299 ADEIKA 304 (382)
T ss_pred HHHHhc
Confidence 777654
No 149
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=1.4e-36 Score=318.33 Aligned_cols=248 Identities=30% Similarity=0.482 Sum_probs=200.2
Q ss_pred CCcceeeeeeecCcEEEEEEEeeCCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeee-ccceEEEEeec
Q 003605 409 GNFDASRILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIE-EQARCLVYELI 487 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~-~~~~~LV~Ey~ 487 (808)
++|.+.+.||+|+||.||++... |+.||+|.++.. ...+.|.+|+.++++++|+|++++++++.. .+..++|+||+
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~--~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~~ 82 (256)
T cd05082 6 KELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKND--ATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYM 82 (256)
T ss_pred HhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCC--chHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEECC
Confidence 46888899999999999999775 788999998743 234679999999999999999999998654 45689999999
Q ss_pred CCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccc
Q 003605 488 PNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEES 567 (808)
Q Consensus 488 ~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~ 567 (808)
++++|.++++.. ....++|..+++++.+++.||+|||+++ ++||||||+||++++++.+||+|||+++......
T Consensus 83 ~~~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~- 156 (256)
T cd05082 83 AKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEANN---FVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ- 156 (256)
T ss_pred CCCcHHHHHHhc--CCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeccccchheEEEcCCCcEEecCCccceeccccC-
Confidence 999999998642 2235899999999999999999999988 9999999999999999999999999987543211
Q ss_pred cccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhcccccccccccCCC
Q 003605 568 RHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPS 646 (808)
Q Consensus 568 ~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~ 646 (808)
....++..|+|||++.+..++.++|||||||++|||++ |+.||.... ...+..+... .
T Consensus 157 ----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~---~~~~~~~~~~--------------~ 215 (256)
T cd05082 157 ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP---LKDVVPRVEK--------------G 215 (256)
T ss_pred ----CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCC---HHHHHHHHhc--------------C
Confidence 22334568999999998899999999999999999998 999885321 1122221110 0
Q ss_pred CCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 003605 647 LGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKL 686 (808)
Q Consensus 647 l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~ 686 (808)
.....+......+.+++.+|++.+|++||++.++++.|+.
T Consensus 216 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 255 (256)
T cd05082 216 YKMDAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEH 255 (256)
T ss_pred CCCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhc
Confidence 1111223345678999999999999999999999999875
No 150
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=6.7e-37 Score=340.60 Aligned_cols=252 Identities=23% Similarity=0.297 Sum_probs=196.0
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc---chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEE
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD---QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVY 484 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~---~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~ 484 (808)
.+|++.+.||+|+||.||+++.. +++.||||++.... ......+.+|+++|++++|+||+++++.+.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 36899999999999999999865 68999999986432 233467889999999999999999999999999999999
Q ss_pred eecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccc
Q 003605 485 ELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMD 564 (808)
Q Consensus 485 Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~ 564 (808)
||+++|+|.+++.. ...+++.....++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+|..+..
T Consensus 81 E~~~~g~L~~~i~~----~~~~~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~ 153 (376)
T cd05598 81 DYIPGGDMMSLLIR----LGIFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW 153 (376)
T ss_pred eCCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHEEECCCCCEEEEeCCCCccccc
Confidence 99999999999963 235888889999999999999999998 99999999999999999999999999753210
Q ss_pred cc-----------------------------------------ccccccccccccccccchhhhcCCCccccceeeHHHH
Q 003605 565 EE-----------------------------------------SRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVV 603 (808)
Q Consensus 565 ~~-----------------------------------------~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvv 603 (808)
.. .........||+.|+|||++.+..++.++|||||||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvi 233 (376)
T cd05598 154 THDSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 233 (376)
T ss_pred cccccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccce
Confidence 00 0001123469999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCCCCCc-chhHHhhhhhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCC---CHHH
Q 003605 604 ILELLSGRKPVDMTQPPGQ-ENLVAWARPLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRP---FMGE 679 (808)
Q Consensus 604 LlELlTG~~P~~~~~~~~~-~~lv~w~~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RP---sm~e 679 (808)
||||++|+.||........ ..+..|. .. +...........+.+++.+|+ .+|++|+ ++.|
T Consensus 234 lyell~G~~Pf~~~~~~~~~~~i~~~~-------~~--------~~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~e 297 (376)
T cd05598 234 LYEMLVGQPPFLADTPAETQLKVINWE-------TT--------LHIPSQAKLSREASDLILRLC-CGAEDRLGKNGADE 297 (376)
T ss_pred eeehhhCCCCCCCCCHHHHHHHHhccC-------cc--------ccCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHH
Confidence 9999999999975432110 0011110 00 000011123345677777766 5999999 8888
Q ss_pred HHHH
Q 003605 680 VVQA 683 (808)
Q Consensus 680 Vl~~ 683 (808)
+++.
T Consensus 298 ll~h 301 (376)
T cd05598 298 IKAH 301 (376)
T ss_pred HhCC
Confidence 8755
No 151
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=1.4e-36 Score=320.93 Aligned_cols=255 Identities=27% Similarity=0.397 Sum_probs=194.4
Q ss_pred eeeeecCcEEEEEEEeeC---CCEEEEEEeeccc-chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecCCC
Q 003605 415 RILGEGGFGLVYSGVLDD---GTKVAVKVLKRVD-QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIPNG 490 (808)
Q Consensus 415 ~~LG~G~fG~VYkg~l~d---g~~VAVK~lk~~~-~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~~G 490 (808)
+.||+|+||.||+|...+ +..+|+|.++... ......|.+|+.++++++|+||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 368999999999998653 3578999987543 334467899999999999999999999999988999999999999
Q ss_pred Ccccccccccc-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccccc
Q 003605 491 SVESHLHGVDK-ESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRH 569 (808)
Q Consensus 491 sL~~~L~~~~~-~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~ 569 (808)
+|.++++.... ....+++..+++++.|+++||+|||+.+ ++||||||+||+++.++++||+|||+++.........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~ 157 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNN---FIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYV 157 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---EeccccCcceEEEcCCCcEEECCccccccccCcceee
Confidence 99999975332 2235678888999999999999999988 9999999999999999999999999987543322222
Q ss_pred cccccccccccccchhhhcC-------CCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhccccccccc
Q 003605 570 ISTRVMGTFGYVAPEYAMTG-------HLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLER 641 (808)
Q Consensus 570 ~~~~~~Gt~~Y~APE~l~~~-------~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ 641 (808)
......++..|+|||++... .++.++|||||||++|||++ |+.||...... ....+.. .+....
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~---~~~~~~~-----~~~~~~ 229 (269)
T cd05087 158 TPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDE---QVLTYTV-----REQQLK 229 (269)
T ss_pred cCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChH---HHHHHHh-----hcccCC
Confidence 22334577889999988642 35789999999999999996 99999653321 1111110 011111
Q ss_pred ccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 003605 642 IIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALK 685 (808)
Q Consensus 642 ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le 685 (808)
+.++.+.. .....+.+++.+|+ .+|++||+++||++.|+
T Consensus 230 ~~~~~~~~----~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 230 LPKPRLKL----PLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCCCccCC----CCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 22222211 23346788999998 58999999999998874
No 152
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=8.4e-37 Score=321.96 Aligned_cols=254 Identities=27% Similarity=0.405 Sum_probs=200.1
Q ss_pred HHHhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccchhhHHHHHHHHHHhhc-ccccceeEEeeeeec-----
Q 003605 405 EKATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQQGGREFLAEVEMLSRL-HHRNLVKLIGICIEE----- 477 (808)
Q Consensus 405 ~~at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~~~~~----- 477 (808)
+.+++.|+..+.||+|+||.||+|... +++.||+|++... .....++.+|+.++.++ +|+||+++++++...
T Consensus 2 ~~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~-~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~ 80 (272)
T cd06637 2 RDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-GDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGM 80 (272)
T ss_pred CChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcC-CccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCC
Confidence 346778889999999999999999865 6789999998753 33456788999999998 699999999998753
Q ss_pred -cceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccc
Q 003605 478 -QARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDF 556 (808)
Q Consensus 478 -~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DF 556 (808)
...++||||+.+|+|.+++... ....+.|..+..++.|++.||+|||+.+ |+|||||++||++++++.+||+||
T Consensus 81 ~~~~~iv~e~~~~~~L~~~l~~~--~~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivh~dl~~~nili~~~~~~~l~Df 155 (272)
T cd06637 81 DDQLWLVMEFCGAGSVTDLIKNT--KGNTLKEEWIAYICREILRGLSHLHQHK---VIHRDIKGQNVLLTENAEVKLVDF 155 (272)
T ss_pred CcEEEEEEEcCCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---CccCCCCHHHEEECCCCCEEEccC
Confidence 3578999999999999998642 2346899999999999999999999988 999999999999999999999999
Q ss_pred ccccccccccccccccccccccccccchhhh-----cCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhh
Q 003605 557 GLARSAMDEESRHISTRVMGTFGYVAPEYAM-----TGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARP 631 (808)
Q Consensus 557 GLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~-----~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~ 631 (808)
|+++...... .......|+..|+|||++. ...++.++|||||||++|||++|+.||...... ..+...
T Consensus 156 g~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~-----~~~~~~ 228 (272)
T cd06637 156 GVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPM-----RALFLI 228 (272)
T ss_pred CCceeccccc--ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHH-----HHHHHH
Confidence 9987543211 1223456889999999986 345788999999999999999999999643211 111100
Q ss_pred hcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 632 LLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 632 ~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
. ... ...+ ........+.+++.+||..+|++||++.||++
T Consensus 229 -~--~~~-----~~~~---~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 229 -P--RNP-----APRL---KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred -h--cCC-----CCCC---CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 0 000 0000 11123457889999999999999999999975
No 153
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=1.2e-36 Score=331.97 Aligned_cols=241 Identities=22% Similarity=0.301 Sum_probs=194.3
Q ss_pred CcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc---cchhhHHHHHHHHHHhhccc-ccceeEEeeeeeccceEEEE
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV---DQQGGREFLAEVEMLSRLHH-RNLVKLIGICIEEQARCLVY 484 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~---~~~~~~~f~~Ei~iL~~L~H-pNIV~L~g~~~~~~~~~LV~ 484 (808)
+|++.+.||+|+||.||+|... +++.||||+++.. .....+.+..|++++..++| ++|+++++++.+.+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 5788999999999999999865 5788999999753 23445678899999999965 56888999999889999999
Q ss_pred eecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccc
Q 003605 485 ELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMD 564 (808)
Q Consensus 485 Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~ 564 (808)
||+++|+|.+++.. ...+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 81 E~~~~g~L~~~~~~----~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~ 153 (324)
T cd05587 81 EYVNGGDLMYHIQQ----VGKFKEPHAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDAEGHIKIADFGMCKENIF 153 (324)
T ss_pred cCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEEcCCCCEEEeecCcceecCC
Confidence 99999999998853 235889999999999999999999988 99999999999999999999999999874322
Q ss_pred ccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccC
Q 003605 565 EESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIID 644 (808)
Q Consensus 565 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD 644 (808)
.. .......||..|+|||++.+..++.++|||||||++|||+||+.||..... ..+.... .+
T Consensus 154 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~---~~~~~~i-------------~~ 215 (324)
T cd05587 154 GG--KTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE---DELFQSI-------------ME 215 (324)
T ss_pred CC--CceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH---HHHHHHH-------------Hc
Confidence 11 112345689999999999999999999999999999999999999964321 1111111 11
Q ss_pred CCCCCCCChhhHHHHHHHHHHccccCCCCCCCH
Q 003605 645 PSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFM 677 (808)
Q Consensus 645 ~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm 677 (808)
. ...++......+.+++.+||+.+|++|++.
T Consensus 216 ~--~~~~~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 216 H--NVSYPKSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred C--CCCCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 0 011222344678899999999999999986
No 154
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8e-37 Score=333.09 Aligned_cols=257 Identities=26% Similarity=0.346 Sum_probs=204.6
Q ss_pred HHhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc--------------chhhHHHHHHHHHHhhcccccceeE
Q 003605 406 KATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD--------------QQGGREFLAEVEMLSRLHHRNLVKL 470 (808)
Q Consensus 406 ~at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~--------------~~~~~~f~~Ei~iL~~L~HpNIV~L 470 (808)
...++|++.+.||+|.||.|-+|... +++.||||++.+.. ....+...+||.+|++++|+|||+|
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 34578999999999999999999865 78999999995311 1123578999999999999999999
Q ss_pred Eeeeee--ccceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCC
Q 003605 471 IGICIE--EQARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHD 548 (808)
Q Consensus 471 ~g~~~~--~~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~ 548 (808)
+.+..+ .+..|||+|||..|.+...= .....|...++++++.++..||+|||.++ ||||||||+|+||+++
T Consensus 174 iEvLDDP~s~~~YlVley~s~G~v~w~p----~d~~els~~~Ar~ylrDvv~GLEYLH~Qg---iiHRDIKPsNLLl~~~ 246 (576)
T KOG0585|consen 174 IEVLDDPESDKLYLVLEYCSKGEVKWCP----PDKPELSEQQARKYLRDVVLGLEYLHYQG---IIHRDIKPSNLLLSSD 246 (576)
T ss_pred EEeecCcccCceEEEEEeccCCccccCC----CCcccccHHHHHHHHHHHHHHHHHHHhcC---eeccccchhheEEcCC
Confidence 999765 46789999999988876543 22223999999999999999999999999 9999999999999999
Q ss_pred Ccceecccccccccccc---cccccccccccccccccchhhhcCC----CccccceeeHHHHHHHHHhCCCCCCCCCCCC
Q 003605 549 FTPKVSDFGLARSAMDE---ESRHISTRVMGTFGYVAPEYAMTGH----LLVKSDVYSYGVVILELLSGRKPVDMTQPPG 621 (808)
Q Consensus 549 ~~vKL~DFGLa~~~~~~---~~~~~~~~~~Gt~~Y~APE~l~~~~----~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~ 621 (808)
+++||+|||.+..+... +....-.+.+||+.|+|||...++. .+.+.||||+||.||.|+.|+.||.....
T Consensus 247 g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~~-- 324 (576)
T KOG0585|consen 247 GTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDFE-- 324 (576)
T ss_pred CcEEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccchH--
Confidence 99999999998755221 1112223468999999999887743 25678999999999999999999953211
Q ss_pred cchhHHhhhhhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 003605 622 QENLVAWARPLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALK 685 (808)
Q Consensus 622 ~~~lv~w~~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le 685 (808)
-+..++|+...+.-....+....+.+|++++|++||++|.+..+|..+..
T Consensus 325 --------------~~l~~KIvn~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~Hpw 374 (576)
T KOG0585|consen 325 --------------LELFDKIVNDPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLHPW 374 (576)
T ss_pred --------------HHHHHHHhcCcccCCCcccccHHHHHHHHHHhhcChhheeehhhheecce
Confidence 12234455554433333456778999999999999999999999987764
No 155
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=1.9e-36 Score=329.68 Aligned_cols=240 Identities=24% Similarity=0.353 Sum_probs=191.1
Q ss_pred eeeeecCcEEEEEEEee-CCCEEEEEEeecc---cchhhHHHHHHHHHHhhc-ccccceeEEeeeeeccceEEEEeecCC
Q 003605 415 RILGEGGFGLVYSGVLD-DGTKVAVKVLKRV---DQQGGREFLAEVEMLSRL-HHRNLVKLIGICIEEQARCLVYELIPN 489 (808)
Q Consensus 415 ~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~---~~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~~~~~~~~~LV~Ey~~~ 489 (808)
++||+|+||.||+|... +++.||||+++.. .....+.+..|.+++..+ +|+||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999975 6788999999753 223345566777777754 899999999999999999999999999
Q ss_pred CCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccccc
Q 003605 490 GSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRH 569 (808)
Q Consensus 490 GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~ 569 (808)
|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 g~L~~~~~~----~~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~--~ 151 (316)
T cd05592 81 GDLMFHIQS----SGRFDEARARFYAAEIICGLQFLHKKG---IIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE--G 151 (316)
T ss_pred CcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC--C
Confidence 999998853 235889999999999999999999988 9999999999999999999999999997543222 2
Q ss_pred cccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCC
Q 003605 570 ISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGN 649 (808)
Q Consensus 570 ~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~ 649 (808)
......||..|+|||++.+..++.++|||||||++|||++|+.||..... ..+. ...... ..
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~---~~~~---~~i~~~------------~~ 213 (316)
T cd05592 152 KASTFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDE---DELF---DSILND------------RP 213 (316)
T ss_pred ccccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCH---HHHH---HHHHcC------------CC
Confidence 22345689999999999998999999999999999999999999964321 1111 111100 01
Q ss_pred CCChhhHHHHHHHHHHccccCCCCCCCHH-HHH
Q 003605 650 DVPFDSVAKVAAIASMCVQPEVQHRPFMG-EVV 681 (808)
Q Consensus 650 ~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~-eVl 681 (808)
.++......+.+++.+||+.+|++||++. +++
T Consensus 214 ~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 214 HFPRWISKEAKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred CCCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 12223345688999999999999999875 443
No 156
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.1e-36 Score=318.52 Aligned_cols=249 Identities=28% Similarity=0.421 Sum_probs=199.7
Q ss_pred eeeeecCcEEEEEEEeeC--CC--EEEEEEeecccc-hhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecCC
Q 003605 415 RILGEGGFGLVYSGVLDD--GT--KVAVKVLKRVDQ-QGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIPN 489 (808)
Q Consensus 415 ~~LG~G~fG~VYkg~l~d--g~--~VAVK~lk~~~~-~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~~ 489 (808)
++||+|++|.||+|.+.+ ++ .||||.++.... ...++|.+|++++++++|+||+++++++.+ ...++|+||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 468999999999998643 33 689999986544 566789999999999999999999999988 888999999999
Q ss_pred CCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccccc
Q 003605 490 GSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRH 569 (808)
Q Consensus 490 GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~ 569 (808)
|+|.+++..... ..++|...+.++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++.........
T Consensus 80 ~~L~~~l~~~~~--~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~ 154 (257)
T cd05040 80 GSLLDRLRKDAL--GHFLISTLCDYAVQIANGMRYLESKR---FIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHY 154 (257)
T ss_pred CcHHHHHHhccc--ccCcHHHHHHHHHHHHHHHHHHHhCC---ccccccCcccEEEecCCEEEeccccccccccccccce
Confidence 999999975322 46899999999999999999999988 9999999999999999999999999998664322211
Q ss_pred -cccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCC
Q 003605 570 -ISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSL 647 (808)
Q Consensus 570 -~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l 647 (808)
......++..|+|||++.+..++.++|||||||++|||++ |+.||+.... .++..... ....
T Consensus 155 ~~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~---~~~~~~~~---~~~~---------- 218 (257)
T cd05040 155 VMEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSG---SQILKKID---KEGE---------- 218 (257)
T ss_pred ecccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCH---HHHHHHHH---hcCC----------
Confidence 1123457789999999998899999999999999999999 9999864321 11111111 0000
Q ss_pred CCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 003605 648 GNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALK 685 (808)
Q Consensus 648 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le 685 (808)
....+......+.+++.+|++.+|++||++.||++.|.
T Consensus 219 ~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 219 RLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred cCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 00112233467899999999999999999999998875
No 157
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1.5e-36 Score=323.60 Aligned_cols=261 Identities=26% Similarity=0.435 Sum_probs=202.8
Q ss_pred CcceeeeeeecCcEEEEEEEe-----eCCCEEEEEEeecc-cchhhHHHHHHHHHHhhcccccceeEEeeeeec--cceE
Q 003605 410 NFDASRILGEGGFGLVYSGVL-----DDGTKVAVKVLKRV-DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEE--QARC 481 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l-----~dg~~VAVK~lk~~-~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~--~~~~ 481 (808)
.|.+.+.||+|+||.||++.+ .++..||+|.++.. .....+++.+|++++++++|+||+++++++.+. ...+
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 84 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence 467788999999999999974 35788999998743 234456899999999999999999999998775 5679
Q ss_pred EEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccc
Q 003605 482 LVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARS 561 (808)
Q Consensus 482 LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~ 561 (808)
+||||+++++|.+++.. ....++|.+++.++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++.
T Consensus 85 lv~e~~~g~~L~~~l~~---~~~~~~~~~~~~i~~~i~~aL~~lH~~g---i~H~dlkp~Nil~~~~~~~~l~dfg~~~~ 158 (284)
T cd05079 85 LIMEFLPSGSLKEYLPR---NKNKINLKQQLKYAVQICKGMDYLGSRQ---YVHRDLAARNVLVESEHQVKIGDFGLTKA 158 (284)
T ss_pred EEEEccCCCCHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecccchheEEEcCCCCEEECCCccccc
Confidence 99999999999999853 2235899999999999999999999988 99999999999999999999999999986
Q ss_pred ccccccc-ccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCC---------CcchhHHhhhh
Q 003605 562 AMDEESR-HISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPP---------GQENLVAWARP 631 (808)
Q Consensus 562 ~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~---------~~~~lv~w~~~ 631 (808)
....... .......++..|+|||++.+..++.++|||||||++|||+|++.|....... .......+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 237 (284)
T cd05079 159 IETDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTLFLKMIGPTHGQMTVTRLVR- 237 (284)
T ss_pred cccCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccchhhhhcccccccccHHHHHH-
Confidence 5432211 1122345677899999999888999999999999999999987664321100 0000001100
Q ss_pred hcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 003605 632 LLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLV 687 (808)
Q Consensus 632 ~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i 687 (808)
.+........+......+.+|+.+|++.+|++||++.+|++.|+.+
T Consensus 238 ----------~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 238 ----------VLEEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred ----------HHHcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 0000111112234557899999999999999999999999999876
No 158
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=1.4e-36 Score=338.74 Aligned_cols=255 Identities=20% Similarity=0.285 Sum_probs=199.8
Q ss_pred HHHHhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc---cchhhHHHHHHHHHHhhcccccceeEEeeeeeccc
Q 003605 404 IEKATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV---DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQA 479 (808)
Q Consensus 404 l~~at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~---~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~ 479 (808)
+....++|++.+.||+|+||.||++... +++.+|+|.+++. .....+.+.+|+++++.++|+||+++++++.+++.
T Consensus 38 ~~~~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~ 117 (370)
T cd05621 38 LQMKAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKY 117 (370)
T ss_pred cCCCHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCE
Confidence 3344578999999999999999999975 6789999998642 22334568899999999999999999999999999
Q ss_pred eEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccc
Q 003605 480 RCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLA 559 (808)
Q Consensus 480 ~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa 559 (808)
.++||||+++|+|.+++.. ..+++..+..++.|++.||+|||+.+ |+||||||+||||++++.+||+|||++
T Consensus 118 ~~lv~Ey~~gg~L~~~l~~-----~~~~~~~~~~~~~qil~aL~~LH~~~---IvHrDLKp~NILl~~~~~~kL~DFG~a 189 (370)
T cd05621 118 LYMVMEYMPGGDLVNLMSN-----YDVPEKWAKFYTAEVVLALDAIHSMG---LIHRDVKPDNMLLDKHGHLKLADFGTC 189 (370)
T ss_pred EEEEEcCCCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEEecccc
Confidence 9999999999999999852 24788899999999999999999988 999999999999999999999999999
Q ss_pred cccccccccccccccccccccccchhhhcC----CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccc
Q 003605 560 RSAMDEESRHISTRVMGTFGYVAPEYAMTG----HLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTS 635 (808)
Q Consensus 560 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~----~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~ 635 (808)
+...... ........||+.|+|||++.+. .++.++|||||||+||||++|+.||..... .....
T Consensus 190 ~~~~~~~-~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~------~~~~~----- 257 (370)
T cd05621 190 MKMDETG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSL------VGTYS----- 257 (370)
T ss_pred eecccCC-ceecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCH------HHHHH-----
Confidence 8653221 1112345699999999998754 378899999999999999999999964321 11111
Q ss_pred ccccccccCCCCCCCCC--hhhHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 003605 636 REGLERIIDPSLGNDVP--FDSVAKVAAIASMCVQPEVQH--RPFMGEVVQA 683 (808)
Q Consensus 636 ~~~l~~ivD~~l~~~~~--~~~~~~l~~Li~~Cl~~dP~~--RPsm~eVl~~ 683 (808)
.+.+......++ ......+.+++..|+..++.+ |+++.|+++.
T Consensus 258 -----~i~~~~~~~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 258 -----KIMDHKNSLNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred -----HHHhCCcccCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 111111001111 123456788899999865544 8899998775
No 159
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=8.4e-37 Score=321.45 Aligned_cols=251 Identities=29% Similarity=0.508 Sum_probs=198.8
Q ss_pred eeeeecCcEEEEEEEeeC-------CCEEEEEEeeccc-chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEee
Q 003605 415 RILGEGGFGLVYSGVLDD-------GTKVAVKVLKRVD-QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 415 ~~LG~G~fG~VYkg~l~d-------g~~VAVK~lk~~~-~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
+.||+|+||.||+|+..+ +..+|||.+.... .....+|.+|++++++++|+||++++++|...+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 368999999999998642 2579999886532 24456899999999999999999999999998999999999
Q ss_pred cCCCCcccccccccc---CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCC-----cceeccccc
Q 003605 487 IPNGSVESHLHGVDK---ESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDF-----TPKVSDFGL 558 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~---~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~-----~vKL~DFGL 558 (808)
+++++|.++++.... ....++|.+++.++.|++.||+|||+.+ ++|+||||+||+++.+. .++|+|||+
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~ 157 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMH---FIHRDLAARNCLVSEKGYDADRVVKIGDFGL 157 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCC---cccCCCChheEEEecCCCCCCcceEECCccc
Confidence 999999999974322 2245889999999999999999999887 99999999999999877 899999999
Q ss_pred ccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhccccc
Q 003605 559 ARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSRE 637 (808)
Q Consensus 559 a~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~ 637 (808)
++...............++..|+|||++.++.++.++|||||||++|||+| |+.||..... .....+.. ..
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~---~~~~~~~~----~~- 229 (269)
T cd05044 158 ARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNN---QEVLQHVT----AG- 229 (269)
T ss_pred ccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCH---HHHHHHHh----cC-
Confidence 976543322222223345678999999999999999999999999999998 9999863221 11111110 00
Q ss_pred ccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 003605 638 GLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALK 685 (808)
Q Consensus 638 ~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le 685 (808)
.....+......+.+++.+||+.+|++||++.+|++.|+
T Consensus 230 ---------~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 230 ---------GRLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred ---------CccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 001122234567899999999999999999999999886
No 160
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=1.6e-36 Score=330.82 Aligned_cols=238 Identities=26% Similarity=0.345 Sum_probs=192.0
Q ss_pred eeeeecCcEEEEEEEee-CCCEEEEEEeecc---cchhhHHHHHHHHHHhhc-ccccceeEEeeeeeccceEEEEeecCC
Q 003605 415 RILGEGGFGLVYSGVLD-DGTKVAVKVLKRV---DQQGGREFLAEVEMLSRL-HHRNLVKLIGICIEEQARCLVYELIPN 489 (808)
Q Consensus 415 ~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~---~~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~~~~~~~~~LV~Ey~~~ 489 (808)
++||+|+||.||+|... +++.||||+++.. .....+.+..|++++..+ +|+||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999975 6889999999752 233456778899999877 699999999999999999999999999
Q ss_pred CCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccccc
Q 003605 490 GSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRH 569 (808)
Q Consensus 490 GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~ 569 (808)
|+|.++++. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 g~L~~~i~~----~~~l~~~~~~~~~~ql~~~L~~lH~~~---ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~--~ 151 (320)
T cd05590 81 GDLMFHIQK----SRRFDEARARFYAAEITSALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNG--K 151 (320)
T ss_pred chHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCC--C
Confidence 999998853 245899999999999999999999988 9999999999999999999999999987532211 1
Q ss_pred cccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCC
Q 003605 570 ISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGN 649 (808)
Q Consensus 570 ~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~ 649 (808)
......||+.|+|||++.+..++.++|||||||++|||++|+.||..... ..+.. ..... . .
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~---~~~~~---~i~~~----------~--~ 213 (320)
T cd05590 152 TTSTFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENE---DDLFE---AILND----------E--V 213 (320)
T ss_pred cccccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCH---HHHHH---HHhcC----------C--C
Confidence 22345689999999999998999999999999999999999999964321 11111 11110 0 0
Q ss_pred CCChhhHHHHHHHHHHccccCCCCCCCHHH
Q 003605 650 DVPFDSVAKVAAIASMCVQPEVQHRPFMGE 679 (808)
Q Consensus 650 ~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~e 679 (808)
..+......+.+++.+||+.||++|+++.+
T Consensus 214 ~~~~~~~~~~~~li~~~L~~dP~~R~~~~~ 243 (320)
T cd05590 214 VYPTWLSQDAVDILKAFMTKNPTMRLGSLT 243 (320)
T ss_pred CCCCCCCHHHHHHHHHHcccCHHHCCCCCC
Confidence 112223457889999999999999999844
No 161
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=2.2e-36 Score=315.99 Aligned_cols=251 Identities=28% Similarity=0.502 Sum_probs=201.8
Q ss_pred CCcceeeeeeecCcEEEEEEEeeCCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecC
Q 003605 409 GNFDASRILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIP 488 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~ 488 (808)
.+|++.+.||+|+||.||++...+++.+|+|.++.. .....+|.+|++++++++|+|++++++++......++||||++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREG-AMSEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME 82 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCC-CCCHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence 467788999999999999999877889999998743 2334679999999999999999999999999999999999999
Q ss_pred CCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccccc
Q 003605 489 NGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESR 568 (808)
Q Consensus 489 ~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~ 568 (808)
+++|.++++.. ...+.|..++.++.+++.||+|||+.+ ++||||||+||+++.++.+||+|||+++.......
T Consensus 83 ~~~L~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~- 155 (256)
T cd05112 83 HGCLSDYLRAQ---RGKFSQETLLGMCLDVCEGMAYLESSN---VIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY- 155 (256)
T ss_pred CCcHHHHHHhC---ccCCCHHHHHHHHHHHHHHHHHHHHCC---ccccccccceEEEcCCCeEEECCCcceeecccCcc-
Confidence 99999998632 235889999999999999999999988 99999999999999999999999999875533211
Q ss_pred ccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCC
Q 003605 569 HISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSL 647 (808)
Q Consensus 569 ~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l 647 (808)
.......++.+|+|||++.++.++.++||||||+++|||++ |+.||..... ..+.... .. . .....
T Consensus 156 ~~~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~---~~~~~~~---~~---~-~~~~~--- 222 (256)
T cd05112 156 TSSTGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSN---SEVVETI---NA---G-FRLYK--- 222 (256)
T ss_pred cccCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCH---HHHHHHH---hC---C-CCCCC---
Confidence 11112234678999999998899999999999999999998 9999864221 1111111 00 0 00111
Q ss_pred CCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 003605 648 GNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQAL 684 (808)
Q Consensus 648 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~L 684 (808)
+......+.+|+.+||+.+|++||++.||++.|
T Consensus 223 ----~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 223 ----PRLASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred ----CCCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 112346799999999999999999999999887
No 162
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=2.6e-36 Score=321.30 Aligned_cols=250 Identities=24% Similarity=0.333 Sum_probs=199.0
Q ss_pred CCcceeeeeeecCcEEEEEEEe-eCCCEEEEEEeecc-cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEee
Q 003605 409 GNFDASRILGEGGFGLVYSGVL-DDGTKVAVKVLKRV-DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l-~dg~~VAVK~lk~~-~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
++|+..++||+|+||.||+|.. .+++.||+|++... .....++|.+|++++.+++|+||+++++++...+..++||||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF 80 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence 3677889999999999999986 47889999998643 334456799999999999999999999999999999999999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEE 566 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~ 566 (808)
+++++|..+. .+++..+..++.|++.||+|||+.+ |+|+||||+|||++.++.++|+|||++......
T Consensus 81 ~~~~~l~~~~--------~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~- 148 (279)
T cd06619 81 MDGGSLDVYR--------KIPEHVLGRIAVAVVKGLTYLWSLK---ILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNS- 148 (279)
T ss_pred CCCCChHHhh--------cCCHHHHHHHHHHHHHHHHHHHHCC---EeeCCCCHHHEEECCCCCEEEeeCCcceecccc-
Confidence 9999987653 3678889999999999999999988 999999999999999999999999998754322
Q ss_pred ccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcc-hhHHhhhhhcccccccccccCC
Q 003605 567 SRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQE-NLVAWARPLLTSREGLERIIDP 645 (808)
Q Consensus 567 ~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~-~lv~w~~~~~~~~~~l~~ivD~ 645 (808)
......|+..|+|||++.+..++.++|||||||++|||++|+.||......... ....+... +.+.
T Consensus 149 ---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~----------~~~~ 215 (279)
T cd06619 149 ---IAKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQC----------IVDE 215 (279)
T ss_pred ---cccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHH----------Hhcc
Confidence 123346889999999999989999999999999999999999999653321110 00011100 0111
Q ss_pred CCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 646 SLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 646 ~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
............++.+++.+|++.+|++||++.|+++.
T Consensus 216 ~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 216 DPPVLPVGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred CCCCCCCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 00000111234578899999999999999999999875
No 163
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=1.3e-36 Score=323.79 Aligned_cols=247 Identities=24% Similarity=0.326 Sum_probs=194.4
Q ss_pred eeecCcEEEEEEEee-CCCEEEEEEeeccc---chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecCCCCc
Q 003605 417 LGEGGFGLVYSGVLD-DGTKVAVKVLKRVD---QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIPNGSV 492 (808)
Q Consensus 417 LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~---~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~~GsL 492 (808)
||+|+||.||++... +|+.||+|++.... ....+.+..|++++++++|+||+++++++.++...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 699999999999865 68999999986421 22334566799999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccccccccc
Q 003605 493 ESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRHIST 572 (808)
Q Consensus 493 ~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~~~~ 572 (808)
.++++.. ....+++..++.++.|++.||+|||+.+ |+||||||+|||+++++.++|+|||++....... ...
T Consensus 81 ~~~~~~~--~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~---~~~ 152 (277)
T cd05607 81 KYHIYNV--GERGLEMERVIHYSAQITCGILHLHSMD---IVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK---TIT 152 (277)
T ss_pred HHHHHhc--cccCCCHHHHHHHHHHHHHHHHHHHHCC---EEEccCChHhEEEcCCCCEEEeeceeeeecCCCc---eee
Confidence 9888632 2345899999999999999999999988 9999999999999999999999999987653221 123
Q ss_pred ccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCCCCC
Q 003605 573 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGNDVP 652 (808)
Q Consensus 573 ~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~~~~ 652 (808)
...|+..|+|||++.+..++.++|||||||++|||++|+.||....... ......+... ...+.. ..
T Consensus 153 ~~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~--~~~~~~~~~~----------~~~~~~-~~ 219 (277)
T cd05607 153 QRAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKV--AKEELKRRTL----------EDEVKF-EH 219 (277)
T ss_pred ccCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchh--hHHHHHHHhh----------cccccc-cc
Confidence 3468899999999999899999999999999999999999996432211 1111111111 111100 01
Q ss_pred hhhHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 003605 653 FDSVAKVAAIASMCVQPEVQHRPFMGEVVQAL 684 (808)
Q Consensus 653 ~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~L 684 (808)
.....++.+++.+||+.||++||+++|+++.+
T Consensus 220 ~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~ 251 (277)
T cd05607 220 QNFTEESKDICRLFLAKKPEDRLGSREKNDDP 251 (277)
T ss_pred ccCCHHHHHHHHHHhccCHhhCCCCccchhhh
Confidence 12345789999999999999999998876443
No 164
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=4.3e-37 Score=312.88 Aligned_cols=266 Identities=23% Similarity=0.322 Sum_probs=216.0
Q ss_pred HhCCcceeeeeeecCcEEEEEEE-eeCCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeecc-----ce
Q 003605 407 ATGNFDASRILGEGGFGLVYSGV-LDDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQ-----AR 480 (808)
Q Consensus 407 at~~f~~~~~LG~G~fG~VYkg~-l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~-----~~ 480 (808)
..++|.+.+.||+|||..||.+. +.++..+|+|++.....++.+..++|++..++++|+||+++++++..+. ..
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~ 98 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA 98 (302)
T ss_pred cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence 45789999999999999999998 5688999999998777778889999999999999999999999986543 47
Q ss_pred EEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccc
Q 003605 481 CLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLAR 560 (808)
Q Consensus 481 ~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~ 560 (808)
||+++|+..|+|.+++.....++..+++.+.++|+.++++||++||+.. +++.||||||.|||+.+.+.++|.|||.+.
T Consensus 99 yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~-~~yAH~DiKP~NILls~~~~~vl~D~GS~~ 177 (302)
T KOG2345|consen 99 YLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKE-PPYAHRDIKPANILLSDSGLPVLMDLGSAT 177 (302)
T ss_pred EEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccC-CcccccCCCcceeEecCCCceEEEeccCcc
Confidence 9999999999999999877667778999999999999999999999985 679999999999999999999999999987
Q ss_pred ccccccccc-------cccccccccccccchhhh---cCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhh
Q 003605 561 SAMDEESRH-------ISTRVMGTFGYVAPEYAM---TGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWAR 630 (808)
Q Consensus 561 ~~~~~~~~~-------~~~~~~Gt~~Y~APE~l~---~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~ 630 (808)
...-.-... -......|.-|+|||.+. +...++++|||||||+||+|+.|..||+.....+
T Consensus 178 ~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~G--------- 248 (302)
T KOG2345|consen 178 QAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQG--------- 248 (302)
T ss_pred ccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcC---------
Confidence 542111000 001234688999999875 4567899999999999999999999997543311
Q ss_pred hhcccccccc-cccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHH
Q 003605 631 PLLTSREGLE-RIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLVC 688 (808)
Q Consensus 631 ~~~~~~~~l~-~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~ 688 (808)
..+. .+....+...-.....+.+.+++++|++.||.+||++.+++..++.+.
T Consensus 249 ------gSlaLAv~n~q~s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~Li 301 (302)
T KOG2345|consen 249 ------GSLALAVQNAQISIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDLI 301 (302)
T ss_pred ------CeEEEeeeccccccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhhc
Confidence 1111 112222222222236688999999999999999999999999988653
No 165
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=3.1e-36 Score=318.12 Aligned_cols=258 Identities=28% Similarity=0.415 Sum_probs=205.0
Q ss_pred hCCcceeeeeeecCcEEEEEEEeeC----CCEEEEEEeeccc-chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEE
Q 003605 408 TGNFDASRILGEGGFGLVYSGVLDD----GTKVAVKVLKRVD-QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCL 482 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l~d----g~~VAVK~lk~~~-~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~L 482 (808)
.++|.+.+.||+|+||.||+|...+ ...||||...... ....+.|.+|+.++++++|+||+++++++.+ +..++
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~l 83 (270)
T cd05056 5 REDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWI 83 (270)
T ss_pred hhhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEE
Confidence 3567888999999999999998653 2468999887543 4456789999999999999999999999875 56789
Q ss_pred EEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccc
Q 003605 483 VYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSA 562 (808)
Q Consensus 483 V~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~ 562 (808)
||||+++|+|.+++... ...++|.+++.++.+++.||+|||+.+ ++||||||+|||++.++.+||+|||+++..
T Consensus 84 v~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~l~~~l~~lH~~~---~~H~dl~p~nili~~~~~~~l~d~g~~~~~ 157 (270)
T cd05056 84 VMELAPLGELRSYLQVN---KYSLDLASLILYSYQLSTALAYLESKR---FVHRDIAARNVLVSSPDCVKLGDFGLSRYL 157 (270)
T ss_pred EEEcCCCCcHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccChheEEEecCCCeEEccCceeeec
Confidence 99999999999999632 335899999999999999999999988 999999999999999999999999998765
Q ss_pred ccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhccccccccc
Q 003605 563 MDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLER 641 (808)
Q Consensus 563 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ 641 (808)
.... ....+...++..|+|||.+....++.++|||||||++|||++ |+.||..... .....+.. ....
T Consensus 158 ~~~~-~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~---~~~~~~~~----~~~~--- 226 (270)
T cd05056 158 EDES-YYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKN---NDVIGRIE----NGER--- 226 (270)
T ss_pred cccc-ceecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCH---HHHHHHHH----cCCc---
Confidence 4322 111222334568999999988889999999999999999986 9999964432 11111111 0000
Q ss_pred ccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHh
Q 003605 642 IIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLVCNE 690 (808)
Q Consensus 642 ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~~~ 690 (808)
...+......+.+++.+|+..+|++||++.++++.|+.+.++
T Consensus 227 -------~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 227 -------LPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred -------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 011223346789999999999999999999999999987654
No 166
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=5.7e-37 Score=333.29 Aligned_cols=238 Identities=26% Similarity=0.359 Sum_probs=192.8
Q ss_pred eeeeecCcEEEEEEEe----eCCCEEEEEEeeccc--chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecC
Q 003605 415 RILGEGGFGLVYSGVL----DDGTKVAVKVLKRVD--QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIP 488 (808)
Q Consensus 415 ~~LG~G~fG~VYkg~l----~dg~~VAVK~lk~~~--~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~ 488 (808)
+.||+|+||.||++.. .+|+.||+|+++... ......+.+|++++++++|+||+++++++.+.+..++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999874 367899999997532 2234567889999999999999999999999999999999999
Q ss_pred CCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccccc
Q 003605 489 NGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESR 568 (808)
Q Consensus 489 ~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~ 568 (808)
+|+|.++++. ...+++..++.++.|+++||+|||+.+ |+||||||+|||+++++.+||+|||+++......
T Consensus 82 ~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~-- 152 (318)
T cd05582 82 GGDLFTRLSK----EVMFTEEDVKFYLAELALALDHLHSLG---IIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE-- 152 (318)
T ss_pred CCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHeEECCCCcEEEeeccCCcccCCCC--
Confidence 9999999852 346899999999999999999999998 9999999999999999999999999987543221
Q ss_pred ccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCC
Q 003605 569 HISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLG 648 (808)
Q Consensus 569 ~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~ 648 (808)
.......|+..|+|||++.+..++.++|||||||++|||++|+.||..... ...... ... ..
T Consensus 153 ~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~---~~~~~~---i~~----------~~-- 214 (318)
T cd05582 153 KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDR---KETMTM---ILK----------AK-- 214 (318)
T ss_pred CceecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCH---HHHHHH---HHc----------CC--
Confidence 122345689999999999988899999999999999999999999964321 111111 111 00
Q ss_pred CCCChhhHHHHHHHHHHccccCCCCCCCHHH
Q 003605 649 NDVPFDSVAKVAAIASMCVQPEVQHRPFMGE 679 (808)
Q Consensus 649 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~e 679 (808)
...+......+.+++.+||+.||++||++.+
T Consensus 215 ~~~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 215 LGMPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred CCCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 1122233467889999999999999999655
No 167
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=2.6e-36 Score=316.39 Aligned_cols=248 Identities=31% Similarity=0.450 Sum_probs=198.0
Q ss_pred eeeeecCcEEEEEEEee--C--CCEEEEEEeecccc-hhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecCC
Q 003605 415 RILGEGGFGLVYSGVLD--D--GTKVAVKVLKRVDQ-QGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIPN 489 (808)
Q Consensus 415 ~~LG~G~fG~VYkg~l~--d--g~~VAVK~lk~~~~-~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~~ 489 (808)
++||+|+||.||+|++. + +..+|+|.++.... ...+++.+|+++++++.|+||+++++++. .+..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 46999999999999853 2 26899999875433 35578999999999999999999999876 4568999999999
Q ss_pred CCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccccc
Q 003605 490 GSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRH 569 (808)
Q Consensus 490 GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~ 569 (808)
|+|.++++.. ..++|..++.++.|++.||+|||+.+ ++||||||+|||++.++.+||+|||+++.........
T Consensus 80 ~~L~~~l~~~----~~~~~~~~~~~~~qi~~~l~~lh~~~---i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~ 152 (257)
T cd05060 80 GPLLKYLKKR----REIPVSDLKELAHQVAMGMAYLESKH---FVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYY 152 (257)
T ss_pred CcHHHHHHhC----CCCCHHHHHHHHHHHHHHHHHHhhcC---eeccCcccceEEEcCCCcEEeccccccceeecCCccc
Confidence 9999999632 26899999999999999999999988 9999999999999999999999999998654322211
Q ss_pred c-ccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCC
Q 003605 570 I-STRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSL 647 (808)
Q Consensus 570 ~-~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l 647 (808)
. .....++..|+|||.+.+..++.++|||||||++|||++ |+.||+.... ..+..+.... .
T Consensus 153 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~---~~~~~~~~~~----~---------- 215 (257)
T cd05060 153 RATTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG---AEVIAMLESG----E---------- 215 (257)
T ss_pred ccccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH---HHHHHHHHcC----C----------
Confidence 1 111223567999999998899999999999999999998 9999864321 2232322111 0
Q ss_pred CCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 003605 648 GNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLV 687 (808)
Q Consensus 648 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i 687 (808)
....+......+.+++.+|+..+|++||++.+|++.|+.+
T Consensus 216 ~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 216 RLPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred cCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 0112233446789999999999999999999999999865
No 168
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=2.8e-36 Score=329.83 Aligned_cols=244 Identities=23% Similarity=0.316 Sum_probs=194.0
Q ss_pred eeeeecCcEEEEEEEee-CCCEEEEEEeecc---cchhhHHHHHHHHHHhhc-ccccceeEEeeeeeccceEEEEeecCC
Q 003605 415 RILGEGGFGLVYSGVLD-DGTKVAVKVLKRV---DQQGGREFLAEVEMLSRL-HHRNLVKLIGICIEEQARCLVYELIPN 489 (808)
Q Consensus 415 ~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~---~~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~~~~~~~~~LV~Ey~~~ 489 (808)
++||+|+||+||++... +++.||||+++.. .....+.+.+|+.++.++ +|+||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 47999999999999865 6789999999853 233456688999999988 699999999999999999999999999
Q ss_pred CCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccccc
Q 003605 490 GSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRH 569 (808)
Q Consensus 490 GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~ 569 (808)
|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 ~~L~~~~~~----~~~l~~~~~~~~~~qi~~al~~lH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~--~ 151 (327)
T cd05617 81 GDLMFHMQR----QRKLPEEHARFYAAEICIALNFLHERG---IIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPG--D 151 (327)
T ss_pred CcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEEeCCCCEEEeccccceeccCCC--C
Confidence 999988852 246999999999999999999999998 9999999999999999999999999987532211 1
Q ss_pred cccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCC
Q 003605 570 ISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGN 649 (808)
Q Consensus 570 ~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~ 649 (808)
......||..|+|||++.+..++.++|||||||+||||++|+.||+........+...+...... ... .
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~---------~~~--~ 220 (327)
T cd05617 152 TTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVIL---------EKP--I 220 (327)
T ss_pred ceecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHH---------hCC--C
Confidence 22345689999999999999999999999999999999999999975433222222222211111 110 1
Q ss_pred CCChhhHHHHHHHHHHccccCCCCCCCHH
Q 003605 650 DVPFDSVAKVAAIASMCVQPEVQHRPFMG 678 (808)
Q Consensus 650 ~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~ 678 (808)
..+......+.+++.+||+.||++|+++.
T Consensus 221 ~~p~~~~~~~~~li~~~L~~dP~~R~~~~ 249 (327)
T cd05617 221 RIPRFLSVKASHVLKGFLNKDPKERLGCQ 249 (327)
T ss_pred CCCCCCCHHHHHHHHHHhccCHHHcCCCC
Confidence 12223346788999999999999999853
No 169
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=7.3e-37 Score=338.66 Aligned_cols=247 Identities=24% Similarity=0.341 Sum_probs=203.1
Q ss_pred HhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc---chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEE
Q 003605 407 ATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD---QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCL 482 (808)
Q Consensus 407 at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~---~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~L 482 (808)
..++|+.+++||+|+||.||.++-+ +|..+|+|+|++.. ....+..+.|-.+|....+++||+|+..|.+.+.+||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 4578999999999999999999865 79999999998743 3445678889999999999999999999999999999
Q ss_pred EEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccc
Q 003605 483 VYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSA 562 (808)
Q Consensus 483 V~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~ 562 (808)
||||++||++..+|. ....|+++.....+.+++.|++-||+.+ +|||||||+|+|||..|++||+||||+.-+
T Consensus 219 iMEylPGGD~mTLL~----~~~~L~e~~arfYiaE~vlAI~~iH~~g---yIHRDIKPdNlLiD~~GHiKLSDFGLs~gl 291 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLM----RKDTLTEDWARFYIAETVLAIESIHQLG---YIHRDIKPDNLLIDAKGHIKLSDFGLSTGL 291 (550)
T ss_pred EEEecCCccHHHHHH----hcCcCchHHHHHHHHHHHHHHHHHHHcC---cccccCChhheeecCCCCEeeccccccchh
Confidence 999999999999995 3457999999999999999999999999 999999999999999999999999998422
Q ss_pred cc----------------------ccccc----cc-------------------cccccccccccchhhhcCCCccccce
Q 003605 563 MD----------------------EESRH----IS-------------------TRVMGTFGYVAPEYAMTGHLLVKSDV 597 (808)
Q Consensus 563 ~~----------------------~~~~~----~~-------------------~~~~Gt~~Y~APE~l~~~~~s~kSDV 597 (808)
.. .+... .. ...+||+.|||||++.+..|+..+|.
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDw 371 (550)
T KOG0605|consen 292 DKKHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDW 371 (550)
T ss_pred hhhhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccH
Confidence 11 00000 00 02569999999999999999999999
Q ss_pred eeHHHHHHHHHhCCCCCCCCCCCC-cchhHHhhhhhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCC
Q 003605 598 YSYGVVILELLSGRKPVDMTQPPG-QENLVAWARPLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPF 676 (808)
Q Consensus 598 wSfGvvLlELlTG~~P~~~~~~~~-~~~lv~w~~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs 676 (808)
||||||+||||.|..||....+.. -..++.|-..+.... ......+..+||.+|+. ||++|--
T Consensus 372 WSLG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~l~fP~---------------~~~~s~eA~DLI~rll~-d~~~RLG 435 (550)
T KOG0605|consen 372 WSLGCIMYEMLVGYPPFCSETPQETYRKIVNWRETLKFPE---------------EVDLSDEAKDLITRLLC-DPENRLG 435 (550)
T ss_pred HHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhhccCCC---------------cCcccHHHHHHHHHHhc-CHHHhcC
Confidence 999999999999999998765532 345566643332211 11223678899999999 9999975
No 170
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=2.2e-36 Score=317.04 Aligned_cols=252 Identities=27% Similarity=0.455 Sum_probs=194.6
Q ss_pred eeeeecCcEEEEEEEee----CCCEEEEEEeecc-cchhhHHHHHHHHHHhhcccccceeEEeeeee-ccceEEEEeecC
Q 003605 415 RILGEGGFGLVYSGVLD----DGTKVAVKVLKRV-DQQGGREFLAEVEMLSRLHHRNLVKLIGICIE-EQARCLVYELIP 488 (808)
Q Consensus 415 ~~LG~G~fG~VYkg~l~----dg~~VAVK~lk~~-~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~-~~~~~LV~Ey~~ 488 (808)
++||+|+||.||+|.+. +...||+|++... .....+.+.+|+.+++.++|+||++++++|.. ++..++|+||+.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 46899999999999864 2357999998643 33446788999999999999999999998764 456799999999
Q ss_pred CCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccccc
Q 003605 489 NGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESR 568 (808)
Q Consensus 489 ~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~ 568 (808)
+|+|.++++.. ...+.+..++.++.|++.||+|||+.+ ++||||||+|||+++++.+||+|||+++........
T Consensus 81 ~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~ 154 (262)
T cd05058 81 HGDLRNFIRSE---THNPTVKDLIGFGLQVAKGMEYLASKK---FVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYY 154 (262)
T ss_pred CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCccccccccCCcce
Confidence 99999999632 234788889999999999999999987 999999999999999999999999999754332111
Q ss_pred c--cccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCC-CCCCCCCCCCcchhHHhhhhhcccccccccccCC
Q 003605 569 H--ISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGR-KPVDMTQPPGQENLVAWARPLLTSREGLERIIDP 645 (808)
Q Consensus 569 ~--~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~-~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~ 645 (808)
. ......++..|+|||++.+..++.++|||||||++|||++|. .||.... ...+..+.. . ...
T Consensus 155 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~---~~~~~~~~~---~-~~~------- 220 (262)
T cd05058 155 SVHNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVD---SFDITVYLL---Q-GRR------- 220 (262)
T ss_pred eecccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCC---HHHHHHHHh---c-CCC-------
Confidence 1 112334577899999998889999999999999999999954 4554221 112222111 0 000
Q ss_pred CCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHH
Q 003605 646 SLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLVCN 689 (808)
Q Consensus 646 ~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~~ 689 (808)
...+......+.+++.+||+.+|++||++.||++.|+.+..
T Consensus 221 ---~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~~ 261 (262)
T cd05058 221 ---LLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIFS 261 (262)
T ss_pred ---CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHhc
Confidence 00111223578899999999999999999999999998753
No 171
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=3.3e-36 Score=316.50 Aligned_cols=255 Identities=26% Similarity=0.414 Sum_probs=205.3
Q ss_pred HhCCcceeeeeeecCcEEEEEEEeeCCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEee
Q 003605 407 ATGNFDASRILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 407 at~~f~~~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
..++|++.+.||+|+||.||++.+.++..+|+|.++.. ....+.|.+|++++++++|+||+++.+++.+ ...+++|||
T Consensus 4 ~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~ 81 (260)
T cd05073 4 PRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEF 81 (260)
T ss_pred cccceeEEeEecCccceEEEEEEecCCccEEEEecCCC-hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEe
Confidence 34678999999999999999999877888999988753 3345689999999999999999999999887 778999999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEE 566 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~ 566 (808)
+++|+|.+++... ....++|.+++.++.+++.||+|||+.+ ++||||||+||+++.++.+||+|||++.......
T Consensus 82 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~aL~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 156 (260)
T cd05073 82 MAKGSLLDFLKSD--EGSKQPLPKLIDFSAQIAEGMAFIEQRN---YIHRDLRAANILVSASLVCKIADFGLARVIEDNE 156 (260)
T ss_pred CCCCcHHHHHHhC--CccccCHHHHHHHHHHHHHHHHHHHhCC---ccccccCcceEEEcCCCcEEECCCcceeeccCCC
Confidence 9999999999642 2346889999999999999999999987 9999999999999999999999999987553322
Q ss_pred ccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhcccccccccccCC
Q 003605 567 SRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDP 645 (808)
Q Consensus 567 ~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~ 645 (808)
. .......++..|+|||++..+.++.++|||||||++|||+| |+.||..... ..+..+.. ..
T Consensus 157 ~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~---~~~~~~~~----~~--------- 219 (260)
T cd05073 157 Y-TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN---PEVIRALE----RG--------- 219 (260)
T ss_pred c-ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCH---HHHHHHHh----CC---------
Confidence 1 11122345678999999998889999999999999999999 8999864321 12222211 00
Q ss_pred CCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 003605 646 SLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKL 686 (808)
Q Consensus 646 ~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~ 686 (808)
............+.+++.+|++.+|++||++.++.+.|+.
T Consensus 220 -~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 220 -YRMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred -CCCCCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 0011122334678899999999999999999999999874
No 172
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=3.6e-36 Score=325.56 Aligned_cols=263 Identities=23% Similarity=0.363 Sum_probs=203.0
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc-cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEee
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV-DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~-~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
++|++.+.||+|+||.||++... ++..+|+|.++.. .....+++.+|++++.+++|+||++++++|.+++..++||||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 47899999999999999999865 6788999998743 233456788999999999999999999999999999999999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCcEEeeeecccCeeecCCCcceecccccccccccc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHED-SSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDE 565 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~-~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~ 565 (808)
+++++|.++++. ...+++..+..++.|+++||+|||+. + ++||||||+|||++.++.+||+|||++......
T Consensus 81 ~~~~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 153 (308)
T cd06615 81 MDGGSLDQVLKK----AGRIPENILGKISIAVLRGLTYLREKHK---IMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDS 153 (308)
T ss_pred cCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhhCC---EEECCCChHHEEEecCCcEEEccCCCccccccc
Confidence 999999999963 24588999999999999999999974 5 999999999999999999999999998754322
Q ss_pred cccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccccc---c----
Q 003605 566 ESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSRE---G---- 638 (808)
Q Consensus 566 ~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~---~---- 638 (808)
......++..|+|||.+.+..++.++|||||||++|||++|+.||...... .+..+......... .
T Consensus 154 ----~~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 226 (308)
T cd06615 154 ----MANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPDAK---ELEAMFGRPVSEGEAKESHRPV 226 (308)
T ss_pred ----ccccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcchh---hHHHhhcCccccccccCCcccc
Confidence 122346889999999998888999999999999999999999998643321 11111110000000 0
Q ss_pred ------------cccccCCCCC---CCCC-hhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 003605 639 ------------LERIIDPSLG---NDVP-FDSVAKVAAIASMCVQPEVQHRPFMGEVVQALK 685 (808)
Q Consensus 639 ------------l~~ivD~~l~---~~~~-~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le 685 (808)
..++.+.... ...+ ......+.+++.+||..+|++||++.||++..-
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~ 289 (308)
T cd06615 227 SGHPPDSPRPMAIFELLDYIVNEPPPKLPSGAFSDEFQDFVDKCLKKNPKERADLKELTKHPF 289 (308)
T ss_pred cCCCCCccchhhHHHHHHHHhcCCCccCcCcccCHHHHHHHHHHccCChhhCcCHHHHhcChh
Confidence 0000000000 0001 113456899999999999999999999988743
No 173
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.3e-36 Score=324.03 Aligned_cols=250 Identities=25% Similarity=0.380 Sum_probs=203.8
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeec
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELI 487 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~ 487 (808)
.+|+..+.||+|+||.||+|+.. +++.||+|.+........+.+.+|+++++.++|+||+++++++......++||||+
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~ 99 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence 57888999999999999999854 78899999998655555678999999999999999999999999999999999999
Q ss_pred CCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccc
Q 003605 488 PNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEES 567 (808)
Q Consensus 488 ~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~ 567 (808)
++++|.++++. ..+++.+++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++........
T Consensus 100 ~~~~L~~~~~~-----~~~~~~~~~~i~~ql~~aL~~LH~~g---i~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~ 171 (296)
T cd06654 100 AGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 171 (296)
T ss_pred CCCCHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEcCCCCEEECccccchhcccccc
Confidence 99999999852 34889999999999999999999988 99999999999999999999999999875432211
Q ss_pred cccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCC
Q 003605 568 RHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSL 647 (808)
Q Consensus 568 ~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l 647 (808)
......++..|+|||++.+..++.++|||||||++|||++|+.||...... ..+..+. ... . +.+
T Consensus 172 --~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~--~~~~~~~----~~~--~-----~~~ 236 (296)
T cd06654 172 --KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL--RALYLIA----TNG--T-----PEL 236 (296)
T ss_pred --ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHH--HhHHHHh----cCC--C-----CCC
Confidence 122346888999999999888999999999999999999999999643321 1111111 000 0 000
Q ss_pred CCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 648 GNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 648 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
..+......+.+++.+|+..+|++||++.||++.
T Consensus 237 --~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 237 --QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred --CCccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 1122334578899999999999999999999874
No 174
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=1.2e-36 Score=331.75 Aligned_cols=238 Identities=25% Similarity=0.335 Sum_probs=189.4
Q ss_pred eeeeecCcEEEEEEEee-CCCEEEEEEeecc---cchhhHHHHHHHH-HHhhcccccceeEEeeeeeccceEEEEeecCC
Q 003605 415 RILGEGGFGLVYSGVLD-DGTKVAVKVLKRV---DQQGGREFLAEVE-MLSRLHHRNLVKLIGICIEEQARCLVYELIPN 489 (808)
Q Consensus 415 ~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~---~~~~~~~f~~Ei~-iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~~ 489 (808)
++||+|+||+||+|... +|+.||||++... .....+++.+|.. +++.++|+||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 46999999999999975 7899999999742 1223345556655 45778999999999999999999999999999
Q ss_pred CCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccccc
Q 003605 490 GSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRH 569 (808)
Q Consensus 490 GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~ 569 (808)
|+|.+++.. ...+.+..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 g~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~g---ivH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~--~ 151 (323)
T cd05575 81 GELFFHLQR----ERSFPEPRARFYAAEIASALGYLHSLN---IIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHS--K 151 (323)
T ss_pred CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeCCCCHHHeEECCCCcEEEeccCCCcccccCC--C
Confidence 999998852 346889999999999999999999998 9999999999999999999999999987532211 2
Q ss_pred cccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCC
Q 003605 570 ISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGN 649 (808)
Q Consensus 570 ~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~ 649 (808)
......||..|+|||++.+..++.++|||||||++|||++|+.||..... ........ ...+
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~------~~~~~~i~----------~~~~-- 213 (323)
T cd05575 152 TTSTFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT------AEMYDNIL----------NKPL-- 213 (323)
T ss_pred ccccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH------HHHHHHHH----------cCCC--
Confidence 22345689999999999999999999999999999999999999964321 11111111 1111
Q ss_pred CCChhhHHHHHHHHHHccccCCCCCCCHHH
Q 003605 650 DVPFDSVAKVAAIASMCVQPEVQHRPFMGE 679 (808)
Q Consensus 650 ~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~e 679 (808)
..+......+.+++.+||+.+|++||++.+
T Consensus 214 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~~ 243 (323)
T cd05575 214 RLKPNISVSARHLLEGLLQKDRTKRLGAKD 243 (323)
T ss_pred CCCCCCCHHHHHHHHHHhhcCHHhCCCCCC
Confidence 111223467889999999999999999863
No 175
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=1.1e-35 Score=325.63 Aligned_cols=255 Identities=22% Similarity=0.288 Sum_probs=196.8
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc---cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEE
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV---DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVY 484 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~---~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~ 484 (808)
++|++.++||+|+||.||+++.. +++.+|+|++.+. .....+.|.+|+.++..++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 47889999999999999999976 5788999998642 2233456888999999999999999999999999999999
Q ss_pred eecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccc
Q 003605 485 ELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMD 564 (808)
Q Consensus 485 Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~ 564 (808)
||+++|+|.++++. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 81 ey~~~g~L~~~l~~---~~~~l~~~~~~~~~~qi~~al~~lH~~~---iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~ 154 (332)
T cd05623 81 DYYVGGDLLTLLSK---FEDRLPEDMARFYLAEMVIAIDSVHQLH---YVHRDIKPDNILMDMNGHIRLADFGSCLKLME 154 (332)
T ss_pred eccCCCcHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHEEECCCCCEEEeecchheeccc
Confidence 99999999999963 2345899999999999999999999988 99999999999999999999999999875433
Q ss_pred ccccccccccccccccccchhhh-----cCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccccccc
Q 003605 565 EESRHISTRVMGTFGYVAPEYAM-----TGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGL 639 (808)
Q Consensus 565 ~~~~~~~~~~~Gt~~Y~APE~l~-----~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l 639 (808)
.. ........||+.|+|||++. ...++.++|||||||+||||++|+.||.... ...............
T Consensus 155 ~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~------~~~~~~~i~~~~~~~ 227 (332)
T cd05623 155 DG-TVQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAES------LVETYGKIMNHKERF 227 (332)
T ss_pred CC-cceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCC------HHHHHHHHhCCCccc
Confidence 22 12223356999999999986 3467899999999999999999999996432 111111111111000
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 003605 640 ERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQH--RPFMGEVVQA 683 (808)
Q Consensus 640 ~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~--RPsm~eVl~~ 683 (808)
. + + .........+.+++.+|+..++++ |+++.|+++.
T Consensus 228 ~--~-p----~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 228 Q--F-P----AQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred c--C-C----CccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 0 0 0 001123456788888888655444 6889888765
No 176
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=2.6e-36 Score=314.50 Aligned_cols=249 Identities=27% Similarity=0.403 Sum_probs=203.1
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeec
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELI 487 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~ 487 (808)
++|+..+.||+|+||.||+|... +++.+++|.++.... .+++.+|++++++++|+||+++++++.+....++++||+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 80 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC 80 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence 57888899999999999999976 478999999875432 678999999999999999999999999999999999999
Q ss_pred CCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccc
Q 003605 488 PNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEES 567 (808)
Q Consensus 488 ~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~ 567 (808)
++++|.+++.. ....++|..++.++.|+++||+|||+.+ ++||||+|+||+++.++.+||+|||++........
T Consensus 81 ~~~~L~~~l~~---~~~~l~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~ 154 (256)
T cd06612 81 GAGSVSDIMKI---TNKTLTEEEIAAILYQTLKGLEYLHSNK---KIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA 154 (256)
T ss_pred CCCcHHHHHHh---CccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcceEEECCCCcEEEcccccchhcccCcc
Confidence 99999999853 2356899999999999999999999988 99999999999999999999999999876543221
Q ss_pred cccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCC
Q 003605 568 RHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSL 647 (808)
Q Consensus 568 ~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l 647 (808)
......++..|+|||++.+..++.++|||||||++|||++|+.||........ .... .. ...+.+
T Consensus 155 --~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~--~~~~----~~-------~~~~~~ 219 (256)
T cd06612 155 --KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRA--IFMI----PN-------KPPPTL 219 (256)
T ss_pred --ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhh--hhhh----cc-------CCCCCC
Confidence 22334578899999999998999999999999999999999999974322110 0000 00 000000
Q ss_pred CCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 648 GNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 648 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
..+......+.+++.+|++.+|++||++.||++
T Consensus 220 --~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 220 --SDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred --CchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 111223457899999999999999999999975
No 177
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=2.5e-36 Score=325.76 Aligned_cols=259 Identities=27% Similarity=0.475 Sum_probs=203.1
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCC----EEEEEEeeccc-chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEE
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGT----KVAVKVLKRVD-QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCL 482 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~----~VAVK~lk~~~-~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~L 482 (808)
++|+..+.||+|+||.||+|... +|. .||+|.++... .....++.+|+.++++++|+||++++|+|... ..++
T Consensus 7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~~ 85 (303)
T cd05110 7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQL 85 (303)
T ss_pred hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Ccee
Confidence 46777889999999999999864 444 47889887533 23345789999999999999999999999754 5679
Q ss_pred EEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccc
Q 003605 483 VYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSA 562 (808)
Q Consensus 483 V~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~ 562 (808)
++||+++|+|.+++.. ....+++..++.++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++..
T Consensus 86 v~e~~~~g~l~~~~~~---~~~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dikp~Nill~~~~~~kL~Dfg~~~~~ 159 (303)
T cd05110 86 VTQLMPHGCLLDYVHE---HKDNIGSQLLLNWCVQIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLL 159 (303)
T ss_pred eehhcCCCCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHhhcC---eeccccccceeeecCCCceEEccccccccc
Confidence 9999999999999863 2335889999999999999999999988 999999999999999999999999999865
Q ss_pred ccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhccccccccc
Q 003605 563 MDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLER 641 (808)
Q Consensus 563 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ 641 (808)
.............++..|+|||++.+..++.++|||||||++|||++ |+.||.... ...+..+.. .....
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~---~~~~~~~~~----~~~~~-- 230 (303)
T cd05110 160 EGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP---TREIPDLLE----KGERL-- 230 (303)
T ss_pred cCcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCC---HHHHHHHHH----CCCCC--
Confidence 43222212223345678999999998899999999999999999998 889985422 122222221 11100
Q ss_pred ccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHhh
Q 003605 642 IIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLVCNEC 691 (808)
Q Consensus 642 ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~~~~ 691 (808)
..+......+.+++..|+..+|++||+++++++.|+.+.++.
T Consensus 231 --------~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~~ 272 (303)
T cd05110 231 --------PQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARDP 272 (303)
T ss_pred --------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhch
Confidence 011223457889999999999999999999999999875543
No 178
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.6e-37 Score=345.58 Aligned_cols=248 Identities=23% Similarity=0.368 Sum_probs=206.0
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc---cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEE
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV---DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVY 484 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~---~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~ 484 (808)
+-|++.+.||+|+-|.|-.|++. +|+.+|||++.+. .......+.+||-||+-|.|||+++|++++++..++|||.
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 34677889999999999999964 8999999999653 2233456789999999999999999999999999999999
Q ss_pred eecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccc
Q 003605 485 ELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMD 564 (808)
Q Consensus 485 Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~ 564 (808)
||+++|-|.++|- .+.+|.+.+..+++.||+.|+.|+|..+ |+||||||+|+|||.++++||+|||+|..-.
T Consensus 92 Eyv~gGELFdylv----~kG~l~e~eaa~ff~QIi~gv~yCH~~~---icHRDLKpENlLLd~~~nIKIADFGMAsLe~- 163 (786)
T KOG0588|consen 92 EYVPGGELFDYLV----RKGPLPEREAAHFFRQILDGVSYCHAFN---ICHRDLKPENLLLDVKNNIKIADFGMASLEV- 163 (786)
T ss_pred EecCCchhHHHHH----hhCCCCCHHHHHHHHHHHHHHHHHhhhc---ceeccCCchhhhhhcccCEeeeccceeeccc-
Confidence 9999999999995 3456899999999999999999999998 9999999999999999999999999997532
Q ss_pred ccccccccccccccccccchhhhcCCC-ccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccccccccccc
Q 003605 565 EESRHISTRVMGTFGYVAPEYAMTGHL-LVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERII 643 (808)
Q Consensus 565 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~-s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~iv 643 (808)
....-..-+|.+.|.|||++++..| ..++||||.|||||.||||+.||+. .++-...... ..+..
T Consensus 164 --~gklLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdD------dNir~LLlKV---~~G~f--- 229 (786)
T KOG0588|consen 164 --PGKLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDD------DNIRVLLLKV---QRGVF--- 229 (786)
T ss_pred --CCccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCC------ccHHHHHHHH---HcCcc---
Confidence 2233355689999999999999988 5799999999999999999999973 2221111111 11111
Q ss_pred CCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 003605 644 DPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQAL 684 (808)
Q Consensus 644 D~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~L 684 (808)
++|.....+..+|+.+|+..||++|.|++||+++-
T Consensus 230 ------~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kHP 264 (786)
T KOG0588|consen 230 ------EMPSNISSEAQDLLRRMLDVDPSTRITTEEILKHP 264 (786)
T ss_pred ------cCCCcCCHHHHHHHHHHhccCccccccHHHHhhCc
Confidence 13445567888999999999999999999998863
No 179
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.4e-36 Score=339.57 Aligned_cols=261 Identities=20% Similarity=0.279 Sum_probs=196.9
Q ss_pred hCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEee
Q 003605 408 TGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
.++|.+.+.||+|+||.||++... +++.||+|.... ..+.+|++++++|+|+||+++++++......++|+|+
T Consensus 91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~~------~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~ 164 (391)
T PHA03212 91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQR------GGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPR 164 (391)
T ss_pred cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechhh------hhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEec
Confidence 367999999999999999999864 788999997542 3578999999999999999999999999999999999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEE 566 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~ 566 (808)
+. ++|.+++.. ...+++.+++.|+.|++.||+|||+++ |+||||||+|||++.++.+||+|||+++......
T Consensus 165 ~~-~~L~~~l~~----~~~l~~~~~~~i~~qi~~aL~ylH~~~---IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~ 236 (391)
T PHA03212 165 YK-TDLYCYLAA----KRNIAICDILAIERSVLRAIQYLHENR---IIHRDIKAENIFINHPGDVCLGDFGAACFPVDIN 236 (391)
T ss_pred CC-CCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHhEEEcCCCCEEEEeCCccccccccc
Confidence 94 788888752 245899999999999999999999988 9999999999999999999999999997533221
Q ss_pred ccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCc----chhHHhhhhhc---------
Q 003605 567 SRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQ----ENLVAWARPLL--------- 633 (808)
Q Consensus 567 ~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~----~~lv~w~~~~~--------- 633 (808)
........||+.|+|||++.+..++.++|||||||+||||+||+.|+........ ...........
T Consensus 237 -~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~ 315 (391)
T PHA03212 237 -ANKYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPI 315 (391)
T ss_pred -ccccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCc
Confidence 1122345799999999999999999999999999999999999988643221110 00000000000
Q ss_pred cccccccccc---------CCCCCCCC--ChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 634 TSREGLERII---------DPSLGNDV--PFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 634 ~~~~~l~~iv---------D~~l~~~~--~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
.....+..+. .+...... ..+....+.+|+.+||+.||++|||+.|+++.
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~h 376 (391)
T PHA03212 316 DAQANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLDF 376 (391)
T ss_pred chhHHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhcC
Confidence 0000000000 00000000 01234578899999999999999999999753
No 180
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=2e-36 Score=329.62 Aligned_cols=241 Identities=24% Similarity=0.326 Sum_probs=194.2
Q ss_pred eeeeecCcEEEEEEEee-CCCEEEEEEeecc---cchhhHHHHHHHHHHhhc-ccccceeEEeeeeeccceEEEEeecCC
Q 003605 415 RILGEGGFGLVYSGVLD-DGTKVAVKVLKRV---DQQGGREFLAEVEMLSRL-HHRNLVKLIGICIEEQARCLVYELIPN 489 (808)
Q Consensus 415 ~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~---~~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~~~~~~~~~LV~Ey~~~ 489 (808)
++||+|+||+||++... +++.||||+++.. .....+.+..|++++..+ +|+||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999876 5789999999853 233456678899999888 699999999999999999999999999
Q ss_pred CCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccccc
Q 003605 490 GSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRH 569 (808)
Q Consensus 490 GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~ 569 (808)
|+|.+++.. ...+++.++..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++...... .
T Consensus 81 ~~L~~~~~~----~~~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~--~ 151 (318)
T cd05570 81 GDLMFHIQR----SGRFDEPRARFYAAEIVLGLQFLHERG---IIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGG--V 151 (318)
T ss_pred CCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEccCCCHHHeEECCCCcEEecccCCCeecCcCC--C
Confidence 999988853 236899999999999999999999988 9999999999999999999999999987432211 1
Q ss_pred cccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCC
Q 003605 570 ISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGN 649 (808)
Q Consensus 570 ~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~ 649 (808)
......|+..|+|||++.+..++.++|||||||++|||++|+.||..... ..+.. .... .. .
T Consensus 152 ~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~---~~~~~---~i~~----------~~--~ 213 (318)
T cd05570 152 TTSTFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDE---DELFQ---SILE----------DE--V 213 (318)
T ss_pred cccceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCH---HHHHH---HHHc----------CC--C
Confidence 12334689999999999999999999999999999999999999964321 11111 1110 00 0
Q ss_pred CCChhhHHHHHHHHHHccccCCCCCCCH-----HHHHH
Q 003605 650 DVPFDSVAKVAAIASMCVQPEVQHRPFM-----GEVVQ 682 (808)
Q Consensus 650 ~~~~~~~~~l~~Li~~Cl~~dP~~RPsm-----~eVl~ 682 (808)
.++......+.+++.+||+.||++||++ .++++
T Consensus 214 ~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 214 RYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred CCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 1122334678999999999999999999 66654
No 181
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=2.2e-36 Score=315.35 Aligned_cols=252 Identities=29% Similarity=0.511 Sum_probs=199.0
Q ss_pred cceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccchhh--HHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeec
Q 003605 411 FDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQQGG--REFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELI 487 (808)
Q Consensus 411 f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~~~~--~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~ 487 (808)
|++.+.||+|+||+||++... +++.||+|++........ ....+|+.++++++|+||+++++++.+....++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 677899999999999999976 567899999986543332 23456999999999999999999999999999999999
Q ss_pred CCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccc
Q 003605 488 PNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEES 567 (808)
Q Consensus 488 ~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~ 567 (808)
.+++|.+++. ....+++.+++.++.|+++||+|||+.+ |+|+||||+||+++++++++|+|||++.... ..
T Consensus 81 ~~~~L~~~l~----~~~~~~~~~~~~~~~qi~~~L~~Lh~~~---i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~--~~ 151 (260)
T PF00069_consen 81 PGGSLQDYLQ----KNKPLSEEEILKIAYQILEALAYLHSKG---IVHRDIKPENILLDENGEVKLIDFGSSVKLS--EN 151 (260)
T ss_dssp TTEBHHHHHH----HHSSBBHHHHHHHHHHHHHHHHHHHHTT---EEESSBSGGGEEESTTSEEEESSGTTTEEST--ST
T ss_pred cccccccccc----cccccccccccccccccccccccccccc---ccccccccccccccccccccccccccccccc--cc
Confidence 9999999996 2346899999999999999999999998 9999999999999999999999999987531 11
Q ss_pred cccccccccccccccchhhh-cCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCC
Q 003605 568 RHISTRVMGTFGYVAPEYAM-TGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPS 646 (808)
Q Consensus 568 ~~~~~~~~Gt~~Y~APE~l~-~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~ 646 (808)
........++..|+|||++. +...+.++||||+|+++|+|++|..||..... .+........... .... .
T Consensus 152 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~---~~~~~~~~~~~~~-----~~~~-~ 222 (260)
T PF00069_consen 152 NENFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNS---DDQLEIIEKILKR-----PLPS-S 222 (260)
T ss_dssp TSEBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSH---HHHHHHHHHHHHT-----HHHH-H
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccc---hhhhhhhhhcccc-----cccc-c
Confidence 22234456889999999998 78899999999999999999999999975411 1111111100000 0000 0
Q ss_pred CCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 647 LGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 647 l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
. .........+.+++.+||+.||++||++.++++
T Consensus 223 ~--~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 223 S--QQSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp T--TSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred c--cccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 0 000111378999999999999999999999975
No 182
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=1.1e-35 Score=325.70 Aligned_cols=255 Identities=21% Similarity=0.283 Sum_probs=195.7
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc---cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEE
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV---DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVY 484 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~---~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~ 484 (808)
++|++.+.||+|+||.||++... +++.||||+++.. .....+.|.+|+.++..++|+||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 47899999999999999999965 6899999999742 2233456889999999999999999999999999999999
Q ss_pred eecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccc
Q 003605 485 ELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMD 564 (808)
Q Consensus 485 Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~ 564 (808)
||+++|+|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++.....
T Consensus 81 e~~~g~~L~~~l~~---~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~ 154 (331)
T cd05597 81 DYYVGGDLLTLLSK---FEDRLPEDMARFYLAEMVLAIDSVHQLG---YVHRDIKPDNVLLDKNGHIRLADFGSCLRLLA 154 (331)
T ss_pred ecCCCCcHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhCC---eEECCCCHHHEEECCCCCEEEEECCceeecCC
Confidence 99999999999953 2345889999999999999999999998 99999999999999999999999999875433
Q ss_pred ccccccccccccccccccchhhhc-----CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccccccc
Q 003605 565 EESRHISTRVMGTFGYVAPEYAMT-----GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGL 639 (808)
Q Consensus 565 ~~~~~~~~~~~Gt~~Y~APE~l~~-----~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l 639 (808)
... .......||..|+|||++.. +.++.++|||||||++|||++|+.||..... ..............
T Consensus 155 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~------~~~~~~i~~~~~~~ 227 (331)
T cd05597 155 DGT-VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL------VETYGKIMNHKEHF 227 (331)
T ss_pred CCC-ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCH------HHHHHHHHcCCCcc
Confidence 221 11223468999999999873 4578899999999999999999999964321 11111111111100
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHccccCC--CCCCCHHHHHHH
Q 003605 640 ERIIDPSLGNDVPFDSVAKVAAIASMCVQPEV--QHRPFMGEVVQA 683 (808)
Q Consensus 640 ~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP--~~RPsm~eVl~~ 683 (808)
.+ .+ ........+.+++.+|+..++ ..|+++.++++.
T Consensus 228 -~~-~~-----~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 228 -QF-PP-----DVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred -cC-CC-----ccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 00 00 011234567778888775433 347899888766
No 183
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.4e-37 Score=340.59 Aligned_cols=251 Identities=25% Similarity=0.385 Sum_probs=213.0
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeec--ccchhhHHHHHHHHHHhhcccccceeEEeeeeeccc-eEEEE
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKR--VDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQA-RCLVY 484 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~--~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~-~~LV~ 484 (808)
++|...+++|+|+||.++..+.+ +++.+++|.+.- ......+...+|+.++++++|||||.+.+.|.+++. .++||
T Consensus 4 ~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Ivm 83 (426)
T KOG0589|consen 4 DNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIVM 83 (426)
T ss_pred chhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEEE
Confidence 57888899999999999988865 678999999863 344445578899999999999999999999999988 89999
Q ss_pred eecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccc
Q 003605 485 ELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMD 564 (808)
Q Consensus 485 Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~ 564 (808)
+||+||+|.+.|...+ +..+.++.+++++.|++.|+.|||++. |+|||||+.|||++.+..+||+|||+|+....
T Consensus 84 ~Y~eGg~l~~~i~~~k--~~~f~E~~i~~~~~Q~~~av~ylH~~~---iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~ 158 (426)
T KOG0589|consen 84 EYCEGGDLAQLIKEQK--GVLFPEERILKWFVQILLAVNYLHENR---VLHRDLKCANIFLTKDKKVKLGDFGLAKILNP 158 (426)
T ss_pred eecCCCCHHHHHHHHh--hccccHHHHHHHHHHHHHHHHHHHhhh---hhcccchhhhhhccccCceeecchhhhhhcCC
Confidence 9999999999997432 456888999999999999999999887 99999999999999999999999999998754
Q ss_pred ccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccC
Q 003605 565 EESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIID 644 (808)
Q Consensus 565 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD 644 (808)
.. .....+.||+.||+||.+.+..|..|+|||||||++|||++-+++|+..+.. .+ +. ++..
T Consensus 159 ~~--~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~m~---~L---i~----------ki~~ 220 (426)
T KOG0589|consen 159 ED--SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASNMS---EL---IL----------KINR 220 (426)
T ss_pred ch--hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccchH---HH---HH----------HHhh
Confidence 43 2345678999999999999999999999999999999999999999754321 11 11 1111
Q ss_pred CCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 645 PSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 645 ~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
......+..+..++..++..|++.+|+.||++.+++.+
T Consensus 221 -~~~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 221 -GLYSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred -ccCCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 11233566778899999999999999999999999987
No 184
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=3.1e-36 Score=317.95 Aligned_cols=253 Identities=26% Similarity=0.372 Sum_probs=190.5
Q ss_pred eeeecCcEEEEEEEeeC---CCEEEEEEeecc-cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecCCCC
Q 003605 416 ILGEGGFGLVYSGVLDD---GTKVAVKVLKRV-DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIPNGS 491 (808)
Q Consensus 416 ~LG~G~fG~VYkg~l~d---g~~VAVK~lk~~-~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~~Gs 491 (808)
.||+|+||.||+|...+ ...+|+|.++.. ......+|.+|+++++.++|+||++++++|.+.+..++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 58999999999998653 346888887643 23345678999999999999999999999999999999999999999
Q ss_pred ccccccccccC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccccccc
Q 003605 492 VESHLHGVDKE-SAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRHI 570 (808)
Q Consensus 492 L~~~L~~~~~~-~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~~ 570 (808)
|.++++..... ....++...+.++.|++.||+|||+.+ |+||||||+|||+++++++||+|||+++..........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~ 158 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQAD---FIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT 158 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcC---EecccccHhheEecCCCcEEEeccccccccccchheec
Confidence 99999754321 234578889999999999999999988 99999999999999999999999999875433222122
Q ss_pred ccccccccccccchhhhc-------CCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhcccccccccc
Q 003605 571 STRVMGTFGYVAPEYAMT-------GHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLERI 642 (808)
Q Consensus 571 ~~~~~Gt~~Y~APE~l~~-------~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~i 642 (808)
.....++..|+|||++.. ..++.++|||||||++|||++ |..||..... ....... .. +....+
T Consensus 159 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~---~~~~~~~---~~--~~~~~~ 230 (269)
T cd05042 159 KDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSD---EQVLKQV---VR--EQDIKL 230 (269)
T ss_pred cCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCH---HHHHHHH---hh--ccCccC
Confidence 223345678999998753 356789999999999999999 7788754321 1111110 00 111111
Q ss_pred cCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 003605 643 IDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQAL 684 (808)
Q Consensus 643 vD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~L 684 (808)
.++.+ +......+.+++..|+ .||++||+++||++.|
T Consensus 231 ~~~~~----~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 231 PKPQL----DLKYSDRWYEVMQFCW-LDPETRPTAEEVHELL 267 (269)
T ss_pred CCCcc----cccCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence 22222 2234456777888898 5999999999999887
No 185
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=3.5e-36 Score=327.53 Aligned_cols=240 Identities=23% Similarity=0.322 Sum_probs=191.7
Q ss_pred eeeeecCcEEEEEEEee-CCCEEEEEEeeccc---chhhHHHHHHHHHHhhc-ccccceeEEeeeeeccceEEEEeecCC
Q 003605 415 RILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD---QQGGREFLAEVEMLSRL-HHRNLVKLIGICIEEQARCLVYELIPN 489 (808)
Q Consensus 415 ~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~---~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~~~~~~~~~LV~Ey~~~ 489 (808)
++||+|+||.||+|... +|+.||||.++... ....+.+..|++++..+ +|+||+++++++.+.+..++||||+.+
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 47999999999999976 68899999997531 23445677788888765 899999999999999999999999999
Q ss_pred CCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccccc
Q 003605 490 GSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRH 569 (808)
Q Consensus 490 GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~ 569 (808)
|+|.+++.. ...+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 g~L~~~i~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~ 151 (316)
T cd05620 81 GDLMFHIQD----KGRFDLYRATFYAAEIVCGLQFLHSKG---IIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD--N 151 (316)
T ss_pred CcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEeCccCCCeecccCC--C
Confidence 999998853 345889999999999999999999998 9999999999999999999999999987432111 1
Q ss_pred cccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCC
Q 003605 570 ISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGN 649 (808)
Q Consensus 570 ~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~ 649 (808)
......||..|+|||++.+..++.++|||||||++|||++|+.||..... ..+.... .. ..+
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~---~~~~~~~---~~--------~~~---- 213 (316)
T cd05620 152 RASTFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE---DELFESI---RV--------DTP---- 213 (316)
T ss_pred ceeccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH---HHHHHHH---Hh--------CCC----
Confidence 22345689999999999999999999999999999999999999964321 1111110 00 001
Q ss_pred CCChhhHHHHHHHHHHccccCCCCCCCHH-HHH
Q 003605 650 DVPFDSVAKVAAIASMCVQPEVQHRPFMG-EVV 681 (808)
Q Consensus 650 ~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~-eVl 681 (808)
.++.....++.+++.+||+.||++|+++. +++
T Consensus 214 ~~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 214 HYPRWITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred CCCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 11222345788999999999999999985 554
No 186
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=4.1e-36 Score=320.98 Aligned_cols=265 Identities=27% Similarity=0.385 Sum_probs=208.5
Q ss_pred cCCHHHHHHHhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccchhhHHHHHHHHHHhhc-ccccceeEEeeee
Q 003605 398 TFSASEIEKATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQQGGREFLAEVEMLSRL-HHRNLVKLIGICI 475 (808)
Q Consensus 398 ~fs~~el~~at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~~~ 475 (808)
.+..+++..++++|.+.+.||+|+||.||++... +++.+|+|++.... ....++.+|+.+++++ +|+|++++++++.
T Consensus 11 ~~~~~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~ 89 (291)
T cd06639 11 MLGLESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFY 89 (291)
T ss_pred hhhcccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEE
Confidence 4666778888999999999999999999999874 78899999986532 2346778899999999 7999999999987
Q ss_pred ec-----cceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCc
Q 003605 476 EE-----QARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFT 550 (808)
Q Consensus 476 ~~-----~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~ 550 (808)
.. +..++|+||+++|+|.++++........+.|..++.++.|++.||+|||+.+ ++||||||+||++++++.
T Consensus 90 ~~~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dlkp~nili~~~~~ 166 (291)
T cd06639 90 KADKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNR---IIHRDVKGNNILLTTEGG 166 (291)
T ss_pred eccccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCC
Confidence 54 3579999999999999998754334456899999999999999999999987 999999999999999999
Q ss_pred ceecccccccccccccccccccccccccccccchhhhcC-----CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchh
Q 003605 551 PKVSDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMTG-----HLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENL 625 (808)
Q Consensus 551 vKL~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-----~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~l 625 (808)
+||+|||+++....... ......|+..|+|||++... .++.++|||||||++|||++|+.||..... ...+
T Consensus 167 ~kl~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~--~~~~ 242 (291)
T cd06639 167 VKLVDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHP--VKTL 242 (291)
T ss_pred EEEeecccchhcccccc--cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcH--HHHH
Confidence 99999999876533221 11234578899999987643 368899999999999999999999864321 1111
Q ss_pred HHhhhhhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 626 VAWARPLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 626 v~w~~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
..+.+. ....+. .+......+.+++.+|++.+|++||++.|+++.
T Consensus 243 ~~~~~~------~~~~~~-------~~~~~~~~l~~li~~~l~~~p~~Rps~~~il~~ 287 (291)
T cd06639 243 FKIPRN------PPPTLL-------HPEKWCRSFNHFISQCLIKDFEARPSVTHLLEH 287 (291)
T ss_pred HHHhcC------CCCCCC-------cccccCHHHHHHHHHHhhcChhhCcCHHHHhcC
Confidence 111110 000111 112234578999999999999999999999763
No 187
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=2.9e-36 Score=314.68 Aligned_cols=238 Identities=26% Similarity=0.483 Sum_probs=189.7
Q ss_pred eeeeecCcEEEEEEEeeCCC-----------EEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEE
Q 003605 415 RILGEGGFGLVYSGVLDDGT-----------KVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLV 483 (808)
Q Consensus 415 ~~LG~G~fG~VYkg~l~dg~-----------~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV 483 (808)
+.||+|+||.||+|.+.+.. .+++|.++..... ...|.+|+.++++++|+||+++++++.. +..++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 46999999999999986433 5788887654333 6789999999999999999999999988 778999
Q ss_pred EeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCC-------cceeccc
Q 003605 484 YELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDF-------TPKVSDF 556 (808)
Q Consensus 484 ~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~-------~vKL~DF 556 (808)
|||+++|+|.++++.. ...+++..++.++.|++.||+|||+.+ |+||||||+|||++.++ .+||+||
T Consensus 79 ~e~~~~~~L~~~l~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dlkp~Nill~~~~~~~~~~~~~kl~Df 152 (259)
T cd05037 79 EEYVKFGPLDVFLHRE---KNNVSLHWKLDVAKQLASALHYLEDKK---LVHGNVCGKNILVARYGLNEGYVPFIKLSDP 152 (259)
T ss_pred EEcCCCCcHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHhhCC---eecccCccceEEEecCccccCCceeEEeCCC
Confidence 9999999999999632 226899999999999999999999988 99999999999999887 7999999
Q ss_pred ccccccccccccccccccccccccccchhhhcC--CCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhc
Q 003605 557 GLARSAMDEESRHISTRVMGTFGYVAPEYAMTG--HLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLL 633 (808)
Q Consensus 557 GLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~--~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~ 633 (808)
|++..... .....++..|+|||++... .++.++|||||||++|||++ |..|+...... ....+..
T Consensus 153 g~a~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~~---~~~~~~~--- 220 (259)
T cd05037 153 GIPITVLS------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSSS---EKERFYQ--- 220 (259)
T ss_pred Cccccccc------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCch---hHHHHHh---
Confidence 99876432 1223466789999998876 78999999999999999999 56777543211 1111110
Q ss_pred ccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 003605 634 TSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALK 685 (808)
Q Consensus 634 ~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le 685 (808)
+. ...+......+.+++.+|+..+|++||++.||++.|+
T Consensus 221 ----------~~---~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 221 ----------DQ---HRLPMPDCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred ----------cC---CCCCCCCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 00 0011111267899999999999999999999998773
No 188
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=4.2e-36 Score=319.46 Aligned_cols=250 Identities=26% Similarity=0.412 Sum_probs=199.3
Q ss_pred cceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecCC
Q 003605 411 FDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIPN 489 (808)
Q Consensus 411 f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~~ 489 (808)
|++.+.||+|+||.||+|... ++..+++|.+........+.+.+|+++++.++|+||+++++++..++..++|+||+++
T Consensus 7 ~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~~ 86 (282)
T cd06643 7 WEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCAG 86 (282)
T ss_pred HHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecCC
Confidence 556688999999999999976 5778899998765556677899999999999999999999999999999999999999
Q ss_pred CCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccccc
Q 003605 490 GSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRH 569 (808)
Q Consensus 490 GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~ 569 (808)
++|.++++. ....++|..++.++.|++.||+|||+.+ ++||||||+|||++.++++||+|||+++...... .
T Consensus 87 ~~l~~~~~~---~~~~l~~~~~~~~~~qi~~~L~~LH~~~---i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~--~ 158 (282)
T cd06643 87 GAVDAVMLE---LERPLTEPQIRVVCKQTLEALNYLHENK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTI--Q 158 (282)
T ss_pred CcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCcccEEEccCCCEEEccccccccccccc--c
Confidence 999998863 2346999999999999999999999988 9999999999999999999999999987543221 1
Q ss_pred cccccccccccccchhhh-----cCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccC
Q 003605 570 ISTRVMGTFGYVAPEYAM-----TGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIID 644 (808)
Q Consensus 570 ~~~~~~Gt~~Y~APE~l~-----~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD 644 (808)
......++..|+|||++. +..++.++|||||||++|||++|+.||...... ......... ..
T Consensus 159 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~--~~~~~~~~~-----------~~ 225 (282)
T cd06643 159 RRDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPM--RVLLKIAKS-----------EP 225 (282)
T ss_pred ccccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHH--HHHHHHhhc-----------CC
Confidence 123346889999999884 345778999999999999999999998643211 111111100 00
Q ss_pred CCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 645 PSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 645 ~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
+.+ ..+......+.+++.+||+.+|++||++.++++.
T Consensus 226 ~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 262 (282)
T cd06643 226 PTL--AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQH 262 (282)
T ss_pred CCC--CCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 0112234678999999999999999999998764
No 189
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.1e-36 Score=344.73 Aligned_cols=255 Identities=27% Similarity=0.453 Sum_probs=212.5
Q ss_pred eeeeeecCcEEEEEEEe-eCCC----EEEEEEeecc-cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeec
Q 003605 414 SRILGEGGFGLVYSGVL-DDGT----KVAVKVLKRV-DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELI 487 (808)
Q Consensus 414 ~~~LG~G~fG~VYkg~l-~dg~----~VAVK~lk~~-~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~ 487 (808)
.++||+|+||+||||.+ .+|+ +||||++... ..+...++++|+-+|.+|.|+||++|+|+|.... ..||++||
T Consensus 701 ~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvtq~m 779 (1177)
T KOG1025|consen 701 DKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVTQLM 779 (1177)
T ss_pred hceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHHHhc
Confidence 57999999999999985 3454 5899998753 4455689999999999999999999999998765 78999999
Q ss_pred CCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccc
Q 003605 488 PNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEES 567 (808)
Q Consensus 488 ~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~ 567 (808)
+.|+|.||++. ++..+.-...+.|..|||+||.|||++. ++||||.++|||+.+-..+||.|||+++....+..
T Consensus 780 P~G~LlDyvr~---hr~~igsq~lLnw~~QIAkgM~YLe~qr---lVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ 853 (1177)
T KOG1025|consen 780 PLGCLLDYVRE---HRDNIGSQDLLNWCYQIAKGMKYLEEQR---LVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEK 853 (1177)
T ss_pred ccchHHHHHHH---hhccccHHHHHHHHHHHHHHHHHHHhcc---hhhhhhhhhheeecCCCeEEEEecchhhccCcccc
Confidence 99999999974 4456888999999999999999999887 99999999999999999999999999998766555
Q ss_pred cccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhcccccccccccCCC
Q 003605 568 RHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPS 646 (808)
Q Consensus 568 ~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~ 646 (808)
........-.+.|||-|.+....|+.++|||||||.+|||+| |..|++.....+ +..++...
T Consensus 854 ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~e-----------------I~dlle~g 916 (1177)
T KOG1025|consen 854 EYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEE-----------------IPDLLEKG 916 (1177)
T ss_pred cccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHH-----------------hhHHHhcc
Confidence 444444455678999999999999999999999999999999 999997543211 12222222
Q ss_pred CCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHhhh
Q 003605 647 LGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLVCNECD 692 (808)
Q Consensus 647 l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~~~~~ 692 (808)
.+-..+.-+...+..++.+||..|++.||+++++...+.+..++..
T Consensus 917 eRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ardpq 962 (1177)
T KOG1025|consen 917 ERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMARDPQ 962 (1177)
T ss_pred ccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhcCcc
Confidence 2223455677889999999999999999999999999887776543
No 190
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=2.7e-36 Score=318.01 Aligned_cols=254 Identities=23% Similarity=0.396 Sum_probs=202.3
Q ss_pred CcceeeeeeecCcEEEEEEEeeC--CCEEEEEEeecc----------cchhhHHHHHHHHHHhh-cccccceeEEeeeee
Q 003605 410 NFDASRILGEGGFGLVYSGVLDD--GTKVAVKVLKRV----------DQQGGREFLAEVEMLSR-LHHRNLVKLIGICIE 476 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~d--g~~VAVK~lk~~----------~~~~~~~f~~Ei~iL~~-L~HpNIV~L~g~~~~ 476 (808)
+|++.+.||+|+||.||+|.... ++.+|+|.++.. ......++.+|+.++.+ ++|+||+++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47778899999999999999764 688999988531 22334567889998875 799999999999999
Q ss_pred ccceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCcEEeeeecccCeeecCCCcceecc
Q 003605 477 EQARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHE-DSSPRVIHRDFKSSNILLEHDFTPKVSD 555 (808)
Q Consensus 477 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~-~~~p~IiHrDIKpsNILLd~~~~vKL~D 555 (808)
.+..++||||+++++|.+++.........+++..+++++.|++.||.|||+ .+ ++|+||+++|||++.++.+||+|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~---i~H~dl~~~nil~~~~~~~~l~d 157 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKR---IVHRDLTPNNIMLGEDDKVTITD 157 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCc---eeecCCCHHHEEECCCCcEEEec
Confidence 999999999999999999886544445569999999999999999999996 45 99999999999999999999999
Q ss_pred cccccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccc
Q 003605 556 FGLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTS 635 (808)
Q Consensus 556 FGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~ 635 (808)
||++....... ......|+..|++||++.++.++.++||||||+++|||++|+.||..... ........
T Consensus 158 fg~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~------~~~~~~~~-- 226 (269)
T cd08528 158 FGLAKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNM------LSLATKIV-- 226 (269)
T ss_pred ccceeeccccc---ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCH------HHHHHHHh--
Confidence 99997654322 22345688899999999988899999999999999999999999864321 11111111
Q ss_pred ccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 003605 636 REGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALK 685 (808)
Q Consensus 636 ~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le 685 (808)
+..............+.+++.+|++.||++||++.||..+|+
T Consensus 227 --------~~~~~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 227 --------EAVYEPLPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred --------hccCCcCCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 111000011123467899999999999999999999999875
No 191
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=3.8e-36 Score=328.26 Aligned_cols=242 Identities=23% Similarity=0.327 Sum_probs=194.5
Q ss_pred CcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc---cchhhHHHHHHHHHHhhcc-cccceeEEeeeeeccceEEEE
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV---DQQGGREFLAEVEMLSRLH-HRNLVKLIGICIEEQARCLVY 484 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~---~~~~~~~f~~Ei~iL~~L~-HpNIV~L~g~~~~~~~~~LV~ 484 (808)
+|+..++||+|+||.||++... +|+.||||+++.. .....+.+..|++++..+. |++|+++++++.+.+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 4778899999999999999865 7899999999753 2334456888999998885 678888999999889999999
Q ss_pred eecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccc
Q 003605 485 ELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMD 564 (808)
Q Consensus 485 Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~ 564 (808)
||+++|+|.+++.. ...+++.+++.|+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 81 Ey~~~g~L~~~i~~----~~~l~~~~~~~i~~qi~~al~~lH~~~---ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~ 153 (323)
T cd05615 81 EYVNGGDLMYHIQQ----VGKFKEPQAVFYAAEISVGLFFLHRRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMV 153 (323)
T ss_pred cCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEeccccccccCC
Confidence 99999999998852 245899999999999999999999988 99999999999999999999999999875322
Q ss_pred ccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccC
Q 003605 565 EESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIID 644 (808)
Q Consensus 565 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD 644 (808)
.. .......||..|+|||++.+..++.++|||||||++|||++|+.||..... ..+... +..
T Consensus 154 ~~--~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~---~~~~~~-------------i~~ 215 (323)
T cd05615 154 DG--VTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE---DELFQS-------------IME 215 (323)
T ss_pred CC--ccccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCH---HHHHHH-------------HHh
Confidence 21 112335689999999999998999999999999999999999999964321 111111 111
Q ss_pred CCCCCCCChhhHHHHHHHHHHccccCCCCCCCHH
Q 003605 645 PSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMG 678 (808)
Q Consensus 645 ~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~ 678 (808)
.. ..++......+.+++.+|++.+|++|++..
T Consensus 216 ~~--~~~p~~~~~~~~~li~~~l~~~p~~R~~~~ 247 (323)
T cd05615 216 HN--VSYPKSLSKEAVSICKGLMTKHPSKRLGCG 247 (323)
T ss_pred CC--CCCCccCCHHHHHHHHHHcccCHhhCCCCC
Confidence 10 112233446788999999999999999853
No 192
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=6.7e-36 Score=319.67 Aligned_cols=252 Identities=25% Similarity=0.370 Sum_probs=199.2
Q ss_pred CcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc---chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEe
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD---QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYE 485 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~---~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~E 485 (808)
.|+..++||+|+||+||+|... +++.||+|.++... ....+.+.+|++++++++|+||+.+.+++..++..++|||
T Consensus 1 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05632 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEE
Confidence 3677899999999999999865 78899999986432 2234567889999999999999999999999999999999
Q ss_pred ecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccc
Q 003605 486 LIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDE 565 (808)
Q Consensus 486 y~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~ 565 (808)
|+.+++|.+++... ....+++..+..++.|++.||.|||+.+ |+||||||+||++++++.+||+|||++......
T Consensus 81 ~~~~~~L~~~~~~~--~~~~~~~~~~~~~~~ql~~~l~~lH~~~---iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~ 155 (285)
T cd05632 81 IMNGGDLKFHIYNM--GNPGFEEERALFYAAEILCGLEDLHREN---TVYRDLKPENILLDDYGHIRISDLGLAVKIPEG 155 (285)
T ss_pred eccCccHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEECCCCCEEEecCCcceecCCC
Confidence 99999999988632 2336999999999999999999999988 999999999999999999999999998754321
Q ss_pred cccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCC
Q 003605 566 ESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDP 645 (808)
Q Consensus 566 ~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~ 645 (808)
. ......|+..|+|||++.+..++.++|||||||++|||++|+.||....... ....+.......
T Consensus 156 ~---~~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~--~~~~~~~~~~~~---------- 220 (285)
T cd05632 156 E---SIRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKV--KREEVDRRVLET---------- 220 (285)
T ss_pred C---cccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHH--HHHHHHHhhhcc----------
Confidence 1 1123468999999999998999999999999999999999999996432211 111111111000
Q ss_pred CCCCCCChhhHHHHHHHHHHccccCCCCCCC-----HHHHHHH
Q 003605 646 SLGNDVPFDSVAKVAAIASMCVQPEVQHRPF-----MGEVVQA 683 (808)
Q Consensus 646 ~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs-----m~eVl~~ 683 (808)
...+.......+.+|+..|++.+|++||+ +.++++.
T Consensus 221 --~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05632 221 --EEVYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKRH 261 (285)
T ss_pred --ccccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHcC
Confidence 00122233457889999999999999999 5566553
No 193
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=3.7e-36 Score=327.65 Aligned_cols=241 Identities=25% Similarity=0.349 Sum_probs=192.2
Q ss_pred eeeeecCcEEEEEEEee-CCCEEEEEEeeccc---chhhHHHHHHHHHHhhc-ccccceeEEeeeeeccceEEEEeecCC
Q 003605 415 RILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD---QQGGREFLAEVEMLSRL-HHRNLVKLIGICIEEQARCLVYELIPN 489 (808)
Q Consensus 415 ~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~---~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~~~~~~~~~LV~Ey~~~ 489 (808)
+.||+|+||+||+|... +++.||||+++... ....+.+..|..++..+ +|+||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46999999999999975 57899999997531 23345677788888764 899999999999999999999999999
Q ss_pred CCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccccc
Q 003605 490 GSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRH 569 (808)
Q Consensus 490 GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~ 569 (808)
|+|.+++.. ...+++.++..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 g~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~LH~~~---ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~ 151 (316)
T cd05619 81 GDLMFHIQS----CHKFDLPRATFYAAEIICGLQFLHSKG---IVYRDLKLDNILLDTDGHIKIADFGMCKENMLGD--A 151 (316)
T ss_pred CcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eEeCCCCHHHEEECCCCCEEEccCCcceECCCCC--C
Confidence 999999853 245889999999999999999999988 9999999999999999999999999987532211 1
Q ss_pred cccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCC
Q 003605 570 ISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGN 649 (808)
Q Consensus 570 ~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~ 649 (808)
......||..|+|||++.+..++.++|||||||++|||++|+.||..... ..+..... . ..+.
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~---~~~~~~i~---~--------~~~~--- 214 (316)
T cd05619 152 KTCTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDE---EELFQSIR---M--------DNPC--- 214 (316)
T ss_pred ceeeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCH---HHHHHHHH---h--------CCCC---
Confidence 22345689999999999999999999999999999999999999964321 11111110 0 0011
Q ss_pred CCChhhHHHHHHHHHHccccCCCCCCCHH-HHHH
Q 003605 650 DVPFDSVAKVAAIASMCVQPEVQHRPFMG-EVVQ 682 (808)
Q Consensus 650 ~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~-eVl~ 682 (808)
++......+.+++.+||+.+|++||++. ++.+
T Consensus 215 -~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~~ 247 (316)
T cd05619 215 -YPRWLTREAKDILVKLFVREPERRLGVKGDIRQ 247 (316)
T ss_pred -CCccCCHHHHHHHHHHhccCHhhcCCChHHHHc
Confidence 1122335688999999999999999997 5543
No 194
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=5.9e-36 Score=312.93 Aligned_cols=250 Identities=21% Similarity=0.279 Sum_probs=202.0
Q ss_pred CcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc-cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeec
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV-DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELI 487 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~-~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~ 487 (808)
+|++.+.||+|+||.||++... +++.+|+|.++.. .....+++.+|+.++++++|+||+++++++.+++..++||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 5788999999999999999865 7889999998642 2344567889999999999999999999999999999999999
Q ss_pred CCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccc
Q 003605 488 PNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEES 567 (808)
Q Consensus 488 ~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~ 567 (808)
++|+|.+++... ....+++...+.++.|++.||+|||+.+ |+|+||||+||++++++.++|+|||+++......
T Consensus 81 ~~~~l~~~~~~~--~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~- 154 (255)
T cd08219 81 DGGDLMQKIKLQ--RGKLFPEDTILQWFVQMCLGVQHIHEKR---VLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPG- 154 (255)
T ss_pred CCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEECCCCcEEEcccCcceeecccc-
Confidence 999999988532 2345789999999999999999999988 9999999999999999999999999987553321
Q ss_pred cccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCC
Q 003605 568 RHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSL 647 (808)
Q Consensus 568 ~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l 647 (808)
.......|+..|+|||++.+..++.++||||||+++|+|++|+.||+.... ......... ...
T Consensus 155 -~~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~------~~~~~~~~~--~~~-------- 217 (255)
T cd08219 155 -AYACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSW------KNLILKVCQ--GSY-------- 217 (255)
T ss_pred -cccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCH------HHHHHHHhc--CCC--------
Confidence 122335688899999999988899999999999999999999999964221 111111110 000
Q ss_pred CCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 648 GNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 648 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
...+......+.+++.+||+.+|++||++.||+..
T Consensus 218 -~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 218 -KPLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred -CCCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 01122234568899999999999999999999764
No 195
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=1.4e-35 Score=324.98 Aligned_cols=255 Identities=20% Similarity=0.254 Sum_probs=196.7
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc---cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEE
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV---DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVY 484 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~---~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~ 484 (808)
++|.+.+.||+|+||+||+++.. +++.||+|+++.. .....+.+.+|+.++..++|+||+++++++.+++..++||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 57899999999999999999965 6788999999742 2233456888999999999999999999999999999999
Q ss_pred eecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccc
Q 003605 485 ELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMD 564 (808)
Q Consensus 485 Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~ 564 (808)
||+++|+|.++++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 81 Ey~~gg~L~~~l~~~---~~~l~~~~~~~~~~qi~~~L~~lH~~~---iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~ 154 (331)
T cd05624 81 DYYVGGDLLTLLSKF---EDRLPEDMARFYIAEMVLAIHSIHQLH---YVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQ 154 (331)
T ss_pred eCCCCCcHHHHHHHh---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCchHHEEEcCCCCEEEEeccceeeccC
Confidence 999999999999632 246889999999999999999999988 99999999999999999999999999976533
Q ss_pred ccccccccccccccccccchhhhc-----CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccccccc
Q 003605 565 EESRHISTRVMGTFGYVAPEYAMT-----GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGL 639 (808)
Q Consensus 565 ~~~~~~~~~~~Gt~~Y~APE~l~~-----~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l 639 (808)
... .......||..|+|||++.+ +.++.++|||||||+||||++|+.||..... ..............
T Consensus 155 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~------~~~~~~i~~~~~~~ 227 (331)
T cd05624 155 DGT-VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESL------VETYGKIMNHEERF 227 (331)
T ss_pred CCc-eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCH------HHHHHHHHcCCCcc
Confidence 221 11223568999999999875 5678899999999999999999999964321 11111111110000
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHccccCCCC--CCCHHHHHHH
Q 003605 640 ERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQH--RPFMGEVVQA 683 (808)
Q Consensus 640 ~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~--RPsm~eVl~~ 683 (808)
. +.. ...+....+.+++.+|+..++++ |+++.++++.
T Consensus 228 ~--~p~-----~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 228 Q--FPS-----HITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred c--CCC-----ccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 0 000 01123467888999988866544 4678777654
No 196
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=7.7e-36 Score=315.79 Aligned_cols=254 Identities=23% Similarity=0.328 Sum_probs=191.5
Q ss_pred eeeecCcEEEEEEEeeCCC---EEEEEEeeccc-chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecCCCC
Q 003605 416 ILGEGGFGLVYSGVLDDGT---KVAVKVLKRVD-QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIPNGS 491 (808)
Q Consensus 416 ~LG~G~fG~VYkg~l~dg~---~VAVK~lk~~~-~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~~Gs 491 (808)
.||+|+||+||+|...++. .+++|.++... ....++|.+|+++++.++|+||++++++|.+....++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 5999999999999865443 45667665432 3456789999999999999999999999999999999999999999
Q ss_pred ccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccccccc
Q 003605 492 VESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRHIS 571 (808)
Q Consensus 492 L~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~~~ 571 (808)
|.++++........+.+..++.++.|+++||+|||+.+ ++||||||+|||++.++.+||+|||++............
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~---i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~ 158 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHN---FLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETE 158 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCC---eeccCCccceEEEcCCccEEecccccccccCcchhhhcc
Confidence 99999754333345677888999999999999999987 999999999999999999999999998643222211222
Q ss_pred cccccccccccchhhhc-------CCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhccccccccccc
Q 003605 572 TRVMGTFGYVAPEYAMT-------GHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLERII 643 (808)
Q Consensus 572 ~~~~Gt~~Y~APE~l~~-------~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~iv 643 (808)
....++..|+|||++.. ..++.++|||||||++|||++ |..||..... .. .....+. +....+.
T Consensus 159 ~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~---~~---~~~~~~~--~~~~~~~ 230 (268)
T cd05086 159 DDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSD---RE---VLNHVIK--DQQVKLF 230 (268)
T ss_pred cCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCH---HH---HHHHHHh--hcccccC
Confidence 34567889999998753 245789999999999999997 5667753221 11 1111111 1112233
Q ss_pred CCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 003605 644 DPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALK 685 (808)
Q Consensus 644 D~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le 685 (808)
++.+... ....+.+++..|+ .+|++||+++||++.|.
T Consensus 231 ~~~~~~~----~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 231 KPQLELP----YSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred CCccCCC----CcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 3333322 3456788999999 67999999999998874
No 197
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=2.1e-36 Score=347.18 Aligned_cols=269 Identities=22% Similarity=0.337 Sum_probs=196.6
Q ss_pred HHHHHHHhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccchhhHHHHHHHHHHhhcccc------cceeEEee
Q 003605 401 ASEIEKATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHR------NLVKLIGI 473 (808)
Q Consensus 401 ~~el~~at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~Hp------NIV~L~g~ 473 (808)
.+++...+++|++.++||+|+||+||+|... +++.||||+++... ...+++..|++++.+++|. ++++++++
T Consensus 121 ~~~~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~ 199 (467)
T PTZ00284 121 GEDIDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRY 199 (467)
T ss_pred CCccccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEE
Confidence 3455567789999999999999999999865 67889999997532 2334566788888777654 58899998
Q ss_pred eeec-cceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCcEEeeeecccCeeecCCC--
Q 003605 474 CIEE-QARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHED-SSPRVIHRDFKSSNILLEHDF-- 549 (808)
Q Consensus 474 ~~~~-~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~-~~p~IiHrDIKpsNILLd~~~-- 549 (808)
+..+ +..|+|||++ +++|.+++.. ...+++..+..|+.|++.||+|||.+ + ||||||||+||||+.++
T Consensus 200 ~~~~~~~~~iv~~~~-g~~l~~~l~~----~~~l~~~~~~~i~~qi~~aL~yLH~~~g---IiHrDlKP~NILl~~~~~~ 271 (467)
T PTZ00284 200 FQNETGHMCIVMPKY-GPCLLDWIMK----HGPFSHRHLAQIIFQTGVALDYFHTELH---LMHTDLKPENILMETSDTV 271 (467)
T ss_pred EEcCCceEEEEEecc-CCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhcCC---eecCCCCHHHEEEecCCcc
Confidence 8764 5679999988 7788888853 24699999999999999999999974 6 99999999999998765
Q ss_pred --------------cceecccccccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCC
Q 003605 550 --------------TPKVSDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVD 615 (808)
Q Consensus 550 --------------~vKL~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~ 615 (808)
.+||+|||++.... ...+...||..|+|||++.+..++.++|||||||+||||++|+.||+
T Consensus 272 ~~~~~~~~~~~~~~~vkl~DfG~~~~~~-----~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~ 346 (467)
T PTZ00284 272 VDPVTNRALPPDPCRVRICDLGGCCDER-----HSRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYD 346 (467)
T ss_pred cccccccccCCCCceEEECCCCccccCc-----cccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCC
Confidence 49999999876321 22234679999999999999999999999999999999999999997
Q ss_pred CCCCCCcchhHH---------hhhh--------hcccccccccccCCC----CCCCC---ChhhHHHHHHHHHHccccCC
Q 003605 616 MTQPPGQENLVA---------WARP--------LLTSREGLERIIDPS----LGNDV---PFDSVAKVAAIASMCVQPEV 671 (808)
Q Consensus 616 ~~~~~~~~~lv~---------w~~~--------~~~~~~~l~~ivD~~----l~~~~---~~~~~~~l~~Li~~Cl~~dP 671 (808)
.....+...++. |... +......+....++. +.... .......+.+|+.+||+.||
T Consensus 347 ~~~~~~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP 426 (467)
T PTZ00284 347 THDNLEHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDR 426 (467)
T ss_pred CCChHHHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcCh
Confidence 543221111111 1100 000000000000000 00000 01123567899999999999
Q ss_pred CCCCCHHHHHHH
Q 003605 672 QHRPFMGEVVQA 683 (808)
Q Consensus 672 ~~RPsm~eVl~~ 683 (808)
++|||++|++++
T Consensus 427 ~~R~ta~e~L~H 438 (467)
T PTZ00284 427 QKRLNARQMTTH 438 (467)
T ss_pred hhCCCHHHHhcC
Confidence 999999999874
No 198
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.7e-36 Score=330.90 Aligned_cols=242 Identities=25% Similarity=0.330 Sum_probs=191.2
Q ss_pred eeeeecCcEEEEEEEee-CCCEEEEEEeecc---cchhhHHHHHHHH-HHhhcccccceeEEeeeeeccceEEEEeecCC
Q 003605 415 RILGEGGFGLVYSGVLD-DGTKVAVKVLKRV---DQQGGREFLAEVE-MLSRLHHRNLVKLIGICIEEQARCLVYELIPN 489 (808)
Q Consensus 415 ~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~---~~~~~~~f~~Ei~-iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~~ 489 (808)
++||+|+||+||++... +|+.||||+++.. .....+++..|.. +++.++|+||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 46999999999999865 7899999999743 2233455666665 46778999999999999999999999999999
Q ss_pred CCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccccc
Q 003605 490 GSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRH 569 (808)
Q Consensus 490 GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~ 569 (808)
|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||+++...... .
T Consensus 81 ~~L~~~l~~----~~~~~~~~~~~~~~qi~~al~~lH~~g---ivH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~--~ 151 (325)
T cd05604 81 GELFFHLQR----ERSFPEPRARFYAAEIASALGYLHSIN---IVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQS--D 151 (325)
T ss_pred CCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEEeecCCcccCCCCC--C
Confidence 999988852 346899999999999999999999988 9999999999999999999999999987532211 1
Q ss_pred cccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCC
Q 003605 570 ISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGN 649 (808)
Q Consensus 570 ~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~ 649 (808)
......||..|+|||++.+..++.++|||||||++|||++|+.||..... ..+ ...... ..+
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~---~~~---~~~~~~----------~~~-- 213 (325)
T cd05604 152 TTTTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDV---AEM---YDNILH----------KPL-- 213 (325)
T ss_pred CcccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCH---HHH---HHHHHc----------CCc--
Confidence 22345689999999999999999999999999999999999999964321 111 111111 010
Q ss_pred CCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 650 DVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 650 ~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
.........+.+++.+|++.+|++||++++.++.
T Consensus 214 ~~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~ 247 (325)
T cd05604 214 VLRPGASLTAWSILEELLEKDRQRRLGAKEDFLE 247 (325)
T ss_pred cCCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHH
Confidence 0112234678899999999999999998754433
No 199
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=3e-36 Score=320.81 Aligned_cols=238 Identities=24% Similarity=0.409 Sum_probs=188.1
Q ss_pred eeeecCcEEEEEEEeeC-------------------------CCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeE
Q 003605 416 ILGEGGFGLVYSGVLDD-------------------------GTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKL 470 (808)
Q Consensus 416 ~LG~G~fG~VYkg~l~d-------------------------g~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L 470 (808)
.||+|+||.||+|.+.. ...||+|++.........+|.+|++++++++|+||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 69999999999998521 13589999876555556789999999999999999999
Q ss_pred EeeeeeccceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCC-
Q 003605 471 IGICIEEQARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDF- 549 (808)
Q Consensus 471 ~g~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~- 549 (808)
+++|.+....++||||+++|+|.++++. ....+++..+++++.|+++||+|||+.+ |+||||||+|||++.++
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiH~dlkp~Nill~~~~~ 155 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRK---EKGRVPVAWKITVAQQLASALSYLEDKN---LVHGNVCAKNILLARLGL 155 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHcCC---ccCCCCCcccEEEeccCc
Confidence 9999999999999999999999999863 2346889999999999999999999887 99999999999997643
Q ss_pred ------cceecccccccccccccccccccccccccccccchhhhc-CCCccccceeeHHHHHHHHH-hCCCCCCCCCCCC
Q 003605 550 ------TPKVSDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMT-GHLLVKSDVYSYGVVILELL-SGRKPVDMTQPPG 621 (808)
Q Consensus 550 ------~vKL~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~kSDVwSfGvvLlELl-TG~~P~~~~~~~~ 621 (808)
.+|++|||++...... ....++..|+|||.+.+ ..++.++|||||||++|||+ +|+.||.......
T Consensus 156 ~~~~~~~~kl~d~g~~~~~~~~------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~ 229 (274)
T cd05076 156 AEGTSPFIKLSDPGVSFTALSR------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE 229 (274)
T ss_pred ccCccceeeecCCccccccccc------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH
Confidence 3799999998643221 12346788999998865 56899999999999999995 6999886433211
Q ss_pred cchhHHhhhhhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 003605 622 QENLVAWARPLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQAL 684 (808)
Q Consensus 622 ~~~lv~w~~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~L 684 (808)
...+.. ... ..+......+.+++.+||+.+|++||++.+|++.|
T Consensus 230 ---~~~~~~--------------~~~--~~~~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 230 ---KERFYE--------------KKH--RLPEPSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred ---HHHHHH--------------hcc--CCCCCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 111110 000 01111234688999999999999999999999877
No 200
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=3e-36 Score=333.68 Aligned_cols=202 Identities=27% Similarity=0.401 Sum_probs=174.4
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc---cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEE
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV---DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVY 484 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~---~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~ 484 (808)
++|+..+.||+|+||+||++... +++.||||+++.. .....+.+.+|++++.+++|+||+++++++.+.+..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47889999999999999999875 6899999999743 2334567888999999999999999999999999999999
Q ss_pred eecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccc
Q 003605 485 ELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMD 564 (808)
Q Consensus 485 Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~ 564 (808)
||+++|+|.+++.. ...+++..+..++.|++.||+|||+.+ |+||||||+||||+.++.+||+|||+++....
T Consensus 81 E~~~gg~L~~~l~~----~~~l~~~~~~~~~~qi~~~L~~lH~~g---ivHrDLkp~NIli~~~~~vkL~DfG~~~~~~~ 153 (360)
T cd05627 81 EFLPGGDMMTLLMK----KDTLSEEATQFYIAETVLAIDAIHQLG---FIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKK 153 (360)
T ss_pred eCCCCccHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEccCCCHHHEEECCCCCEEEeeccCCccccc
Confidence 99999999999853 345889999999999999999999988 99999999999999999999999999875422
Q ss_pred ccc---------------------------------cccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCC
Q 003605 565 EES---------------------------------RHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGR 611 (808)
Q Consensus 565 ~~~---------------------------------~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~ 611 (808)
... ........||..|+|||++.+..++.++|||||||+||||+||+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~ 233 (360)
T cd05627 154 AHRTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGY 233 (360)
T ss_pred ccccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCC
Confidence 110 00112346999999999999999999999999999999999999
Q ss_pred CCCCCC
Q 003605 612 KPVDMT 617 (808)
Q Consensus 612 ~P~~~~ 617 (808)
.||...
T Consensus 234 ~Pf~~~ 239 (360)
T cd05627 234 PPFCSE 239 (360)
T ss_pred CCCCCC
Confidence 999653
No 201
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=6.4e-36 Score=315.39 Aligned_cols=257 Identities=26% Similarity=0.440 Sum_probs=200.4
Q ss_pred cceeeeeeecCcEEEEEEEee----CCCEEEEEEeecc--cchhhHHHHHHHHHHhhcccccceeEEeeeeecc------
Q 003605 411 FDASRILGEGGFGLVYSGVLD----DGTKVAVKVLKRV--DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQ------ 478 (808)
Q Consensus 411 f~~~~~LG~G~fG~VYkg~l~----dg~~VAVK~lk~~--~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~------ 478 (808)
|.+.++||+|+||.||+|.+. ++..||||+++.. .....+++.+|++++++++|+||+++++++...+
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 556789999999999999864 3678999998742 3445678999999999999999999999986532
Q ss_pred ceEEEEeecCCCCccccccccc--cCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccc
Q 003605 479 ARCLVYELIPNGSVESHLHGVD--KESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDF 556 (808)
Q Consensus 479 ~~~LV~Ey~~~GsL~~~L~~~~--~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DF 556 (808)
..++++||+.+|+|.+++.... .....+++...++++.|++.||+|||+.+ |+||||||+||+++.++.+||+||
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dikp~nili~~~~~~kl~df 157 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKN---FIHRDLAARNCMLNENMTVCVADF 157 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCC---EeecccchhhEEEcCCCCEEECcc
Confidence 2378899999999998875322 12235889999999999999999999988 999999999999999999999999
Q ss_pred ccccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhccc
Q 003605 557 GLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTS 635 (808)
Q Consensus 557 GLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~ 635 (808)
|+++...............++..|++||.+....++.++|||||||++|||++ |+.||..... ..+..+...
T Consensus 158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~---~~~~~~~~~---- 230 (273)
T cd05074 158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN---SEIYNYLIK---- 230 (273)
T ss_pred cccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH---HHHHHHHHc----
Confidence 99986543222222223345678999999998889999999999999999999 8888854321 222222211
Q ss_pred ccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 003605 636 REGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLV 687 (808)
Q Consensus 636 ~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i 687 (808)
.... ..+......+.+++.+|++.+|++||++.||++.|+.+
T Consensus 231 ~~~~----------~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 231 GNRL----------KQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred CCcC----------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0000 01123346899999999999999999999999999865
No 202
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=6.1e-36 Score=314.60 Aligned_cols=251 Identities=26% Similarity=0.445 Sum_probs=200.1
Q ss_pred CcceeeeeeecCcEEEEEEEeeCCCEEEEEEeeccc------chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEE
Q 003605 410 NFDASRILGEGGFGLVYSGVLDDGTKVAVKVLKRVD------QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLV 483 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~------~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV 483 (808)
+|...+.||+|+||.||+|...+++.+|||.++... ....+.+.+|++++++++|+||++++++|.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 467788999999999999998889999999986321 22335688999999999999999999999999999999
Q ss_pred EeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccc
Q 003605 484 YELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAM 563 (808)
Q Consensus 484 ~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~ 563 (808)
+||+++++|.+++.. ...+++..+..++.|++.||+|||+.+ |+|+||+|+||++++++.++|+|||++....
T Consensus 81 ~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~ 153 (265)
T cd06631 81 MEFVPGGSISSILNR----FGPLPEPVFCKYTKQILDGVAYLHNNC---VVHRDIKGNNVMLMPNGIIKLIDFGCARRLA 153 (265)
T ss_pred EecCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHhEEECCCCeEEeccchhhHhhh
Confidence 999999999999952 235889999999999999999999988 9999999999999999999999999987542
Q ss_pred ccc----ccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccccccc
Q 003605 564 DEE----SRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGL 639 (808)
Q Consensus 564 ~~~----~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l 639 (808)
... .........|+..|+|||++.+..++.++|||||||++|||++|+.||...... ....... . ..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~--~~~~~~~----~-~~-- 224 (265)
T cd06631 154 WVGLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRL--AAMFYIG----A-HR-- 224 (265)
T ss_pred hccccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChH--HHHHHhh----h-cc--
Confidence 111 111122345889999999999888999999999999999999999999643211 1100000 0 00
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 640 ERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 640 ~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
......+......+.+++.+||+.+|++||++.|+++
T Consensus 225 ------~~~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 225 ------GLMPRLPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred ------CCCCCCCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0011122334567899999999999999999999875
No 203
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=7.8e-36 Score=312.02 Aligned_cols=254 Identities=25% Similarity=0.348 Sum_probs=205.1
Q ss_pred hCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEee
Q 003605 408 TGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
.++|+..+.||+|+||.||+|... +++.+++|.+........+.+.+|++++++++|+||+++++++.+.+..+++|||
T Consensus 2 ~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~ 81 (262)
T cd06613 2 QEDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEY 81 (262)
T ss_pred ccceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeC
Confidence 367899999999999999999865 6788999999866555678899999999999999999999999999999999999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEE 566 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~ 566 (808)
+++++|.+++.. ....+++.+++.++.|++.||+|||+.+ ++|+||||+||++++++.+||+|||++.......
T Consensus 82 ~~~~~l~~~~~~---~~~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 155 (262)
T cd06613 82 CGGGSLQDIYQV---TRGPLSELQIAYVCRETLKGLAYLHETG---KIHRDIKGANILLTEDGDVKLADFGVSAQLTATI 155 (262)
T ss_pred CCCCcHHHHHHh---hccCCCHHHHHHHHHHHHHHHHHHHhCC---ceecCCChhhEEECCCCCEEECccccchhhhhhh
Confidence 999999998863 2246899999999999999999999988 9999999999999999999999999987643221
Q ss_pred ccccccccccccccccchhhhcC---CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccccccccccc
Q 003605 567 SRHISTRVMGTFGYVAPEYAMTG---HLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERII 643 (808)
Q Consensus 567 ~~~~~~~~~Gt~~Y~APE~l~~~---~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~iv 643 (808)
.......++..|+|||.+.+. .++.++|||||||++|||+||+.||...... ........ . .+.
T Consensus 156 --~~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~--~~~~~~~~------~---~~~ 222 (262)
T cd06613 156 --AKRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPM--RALFLISK------S---NFP 222 (262)
T ss_pred --hccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHh------c---cCC
Confidence 112334678899999998776 8899999999999999999999999643321 11111100 0 000
Q ss_pred CCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 644 DPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 644 D~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
...+ .........+.+++.+|+..+|++||++.+|++
T Consensus 223 ~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 223 PPKL--KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred Cccc--cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0111 112234567899999999999999999999975
No 204
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=4.4e-36 Score=324.48 Aligned_cols=266 Identities=21% Similarity=0.298 Sum_probs=198.9
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc-chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEee
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD-QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~-~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
++|.+.+.||+|+||.||+|+.. +++.||+|+++... ......+.+|++++++++|+||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 56889999999999999999865 67889999997432 23345678999999999999999999999999999999999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEE 566 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~ 566 (808)
+++ +|.+++.. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 86 ~~~-~l~~~~~~---~~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 158 (309)
T cd07872 86 LDK-DLKQYMDD---CGNIMSMHNVKIFLYQILRGLAYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSVPT 158 (309)
T ss_pred CCC-CHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECccccceecCCCc
Confidence 974 88888753 2345889999999999999999999988 9999999999999999999999999987543221
Q ss_pred ccccccccccccccccchhhhc-CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhh--------hhhccccc
Q 003605 567 SRHISTRVMGTFGYVAPEYAMT-GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWA--------RPLLTSRE 637 (808)
Q Consensus 567 ~~~~~~~~~Gt~~Y~APE~l~~-~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~--------~~~~~~~~ 637 (808)
.......++..|+|||++.+ ..++.++|||||||++|||+||+.||......+........ ++.+....
T Consensus 159 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
T cd07872 159 --KTYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWPGISSND 236 (309)
T ss_pred --cccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhhcchh
Confidence 11223457899999998865 46789999999999999999999999654332111111100 00000000
Q ss_pred ccccccCCCCCC----CCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 638 GLERIIDPSLGN----DVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 638 ~l~~ivD~~l~~----~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
.....-.+.... .........+.+++.+|++.||++|||+.|+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 286 (309)
T cd07872 237 EFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMKH 286 (309)
T ss_pred hhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhcC
Confidence 000000000000 0001234567899999999999999999999864
No 205
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=5.5e-36 Score=343.08 Aligned_cols=263 Identities=21% Similarity=0.261 Sum_probs=197.1
Q ss_pred hCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEee
Q 003605 408 TGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
..+|.+.+.||+|+||.||++... +++.||||.... ..+.+|+++|++|+|+|||++++++..++..++|||+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK 241 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 457999999999999999999976 578899996432 3467899999999999999999999999999999999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEE 566 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~ 566 (808)
+ .++|.+++.. ....++|.+++.|+.|+++||+|||+.+ |+||||||+||||+.++.+||+|||+++......
T Consensus 242 ~-~~~L~~~l~~---~~~~l~~~~~~~i~~qi~~aL~yLH~~g---IvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~ 314 (461)
T PHA03211 242 Y-RSDLYTYLGA---RLRPLGLAQVTAVARQLLSAIDYIHGEG---IIHRDIKTENVLVNGPEDICLGDFGAACFARGSW 314 (461)
T ss_pred c-CCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCC---EEECcCCHHHEEECCCCCEEEcccCCceeccccc
Confidence 9 5788888853 2236999999999999999999999998 9999999999999999999999999998654322
Q ss_pred ccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCC-C----cchhHHhhhhhccccccccc
Q 003605 567 SRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPP-G----QENLVAWARPLLTSREGLER 641 (808)
Q Consensus 567 ~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~-~----~~~lv~w~~~~~~~~~~l~~ 641 (808)
.........||..|+|||++.+..++.++|||||||+||||++|..++...... . ...+...++...........
T Consensus 315 ~~~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~ 394 (461)
T PHA03211 315 STPFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQ 394 (461)
T ss_pred ccccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCC
Confidence 222233457999999999999999999999999999999999988765322111 1 11111111110000000000
Q ss_pred ---------c-------cCCCCC-CCCC--hhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 642 ---------I-------IDPSLG-NDVP--FDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 642 ---------i-------vD~~l~-~~~~--~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
. ..+... ..+. ......+.+|+.+||+.||++|||+.|+++.
T Consensus 395 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 395 HAGSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred CcchHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 0 000000 0000 0112367889999999999999999999874
No 206
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=5.5e-36 Score=312.28 Aligned_cols=255 Identities=24% Similarity=0.356 Sum_probs=203.7
Q ss_pred CcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc--cchhhHHHHHHHHHHhhcccccceeEEeeeee--ccceEEEE
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV--DQQGGREFLAEVEMLSRLHHRNLVKLIGICIE--EQARCLVY 484 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~--~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~--~~~~~LV~ 484 (808)
+|++.+.||.|+||.||++... +++.+|+|+++.. .....+++.+|++++++++|+||+++++++.. +...+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 4788899999999999999864 7889999998742 34445678899999999999999999998764 34578999
Q ss_pred eecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcC--CCcEEeeeecccCeeecCCCcceeccccccccc
Q 003605 485 ELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDS--SPRVIHRDFKSSNILLEHDFTPKVSDFGLARSA 562 (808)
Q Consensus 485 Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~--~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~ 562 (808)
||+++++|.+++.........+++..++.++.+++.||+|||..+ ...++|+||||+||++++++.+||+|||++...
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 999999999999754444567999999999999999999999332 233999999999999999999999999999865
Q ss_pred ccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccc
Q 003605 563 MDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERI 642 (808)
Q Consensus 563 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~i 642 (808)
.... .......++..|+|||++.+..++.++||||||+++|+|++|+.||.... ...+.....
T Consensus 161 ~~~~--~~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~---~~~~~~~~~------------ 223 (265)
T cd08217 161 GHDS--SFAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN---QLQLASKIK------------ 223 (265)
T ss_pred cCCc--ccccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC---HHHHHHHHh------------
Confidence 4322 11233468899999999998889999999999999999999999997532 111111111
Q ss_pred cCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 643 IDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 643 vD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
.......+......+.+++.+|++.+|++||++.+|++.
T Consensus 224 --~~~~~~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 224 --EGKFRRIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred --cCCCCCCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 001112233445789999999999999999999999864
No 207
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=2.7e-36 Score=344.15 Aligned_cols=264 Identities=23% Similarity=0.309 Sum_probs=195.8
Q ss_pred HhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeec--------
Q 003605 407 ATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEE-------- 477 (808)
Q Consensus 407 at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~-------- 477 (808)
..++|.+.++||+|+||.||+|+.. +++.||||++.... ....+|+.+|++++|+||+++++++...
T Consensus 64 ~~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~ 139 (440)
T PTZ00036 64 PNKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKN 139 (440)
T ss_pred cCCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCc
Confidence 4568999999999999999999974 68899999886432 2345799999999999999999986432
Q ss_pred cceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCC-cceeccc
Q 003605 478 QARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDF-TPKVSDF 556 (808)
Q Consensus 478 ~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~-~vKL~DF 556 (808)
...++||||++ ++|.+++.........+++..++.++.|++.||+|||+.+ |+||||||+||||+.++ .+||+||
T Consensus 140 ~~l~lvmE~~~-~~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~---IiHrDLKp~NILl~~~~~~vkL~DF 215 (440)
T PTZ00036 140 IFLNVVMEFIP-QTVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKF---ICHRDLKPQNLLIDPNTHTLKLCDF 215 (440)
T ss_pred eEEEEEEecCC-ccHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCcCHHHEEEcCCCCceeeecc
Confidence 13578999997 5787777544444567999999999999999999999998 99999999999998664 7999999
Q ss_pred ccccccccccccccccccccccccccchhhhcC-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccc
Q 003605 557 GLARSAMDEESRHISTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTS 635 (808)
Q Consensus 557 GLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~ 635 (808)
|+|+...... ......||..|+|||++.+. .++.++|||||||+||||++|+.||...... ..+......+-..
T Consensus 216 Gla~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~--~~~~~i~~~~~~p 290 (440)
T PTZ00036 216 GSAKNLLAGQ---RSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSV--DQLVRIIQVLGTP 290 (440)
T ss_pred ccchhccCCC---CcccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHHhCCC
Confidence 9998653221 12234679999999988764 6899999999999999999999999653321 1111111100000
Q ss_pred c-cc-------cc-----cccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 636 R-EG-------LE-----RIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 636 ~-~~-------l~-----~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
. +. .. .+....+...++.....++.+|+.+||+.||++|||+.|+++.
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~h 351 (440)
T PTZ00036 291 TEDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALAD 351 (440)
T ss_pred CHHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhCC
Confidence 0 00 00 0000111111222344678999999999999999999999865
No 208
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=6e-36 Score=330.91 Aligned_cols=264 Identities=24% Similarity=0.323 Sum_probs=197.7
Q ss_pred HhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc--cchhhHHHHHHHHHHhhcccccceeEEeeeeecc-----
Q 003605 407 ATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV--DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQ----- 478 (808)
Q Consensus 407 at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~--~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~----- 478 (808)
..++|.+.+.||+|+||.||++... +|+.||||+++.. ......++.+|+.+++.++|+||+++++++...+
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 4578999999999999999999865 6899999999642 3344567889999999999999999999986543
Q ss_pred -ceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccc
Q 003605 479 -ARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFG 557 (808)
Q Consensus 479 -~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFG 557 (808)
..++||||+.+ +|.+.++ ..+++..+..++.|++.||+|||+++ |+||||||+|||++.++.+||+|||
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~------~~~~~~~~~~~~~qi~~~L~~LH~~~---ivHrDlkp~NIl~~~~~~~kl~Dfg 168 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIH------MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 168 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHh------ccCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEecCC
Confidence 46999999964 6666663 24788999999999999999999998 9999999999999999999999999
Q ss_pred cccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcc------------hh
Q 003605 558 LARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQE------------NL 625 (808)
Q Consensus 558 La~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~------------~l 625 (808)
+++..... .......||..|+|||.+.+..++.++|||||||++|||++|+.||......... ..
T Consensus 169 ~a~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 245 (359)
T cd07876 169 LARTACTN---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPSAEF 245 (359)
T ss_pred CccccccC---ccCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCcHHH
Confidence 99754221 1223456899999999999999999999999999999999999999754321000 00
Q ss_pred HH----hhhhhccccc-----ccccccCCCCC---CCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 626 VA----WARPLLTSRE-----GLERIIDPSLG---NDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 626 v~----w~~~~~~~~~-----~l~~ivD~~l~---~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
.. .......... .+.++...... ..........+.+++.+||+.||++|||+.|+++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 246 MNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred HHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 00 0000000000 00000000000 00111224568899999999999999999999875
No 209
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=3.1e-36 Score=335.00 Aligned_cols=265 Identities=26% Similarity=0.371 Sum_probs=198.0
Q ss_pred CcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc--cchhhHHHHHHHHHHhhcccccceeEEeeeeecc-----ceE
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV--DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQ-----ARC 481 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~--~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~-----~~~ 481 (808)
+|+..+.||+|+||.||++... +++.||||++... .....+++.+|+++++.++|+||+++++++...+ ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 4778899999999999999964 7899999998643 2334567899999999999999999999998766 789
Q ss_pred EEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccc
Q 003605 482 LVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARS 561 (808)
Q Consensus 482 LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~ 561 (808)
+|+||+. ++|.+++. ....+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.
T Consensus 81 lv~e~~~-~~l~~~~~----~~~~l~~~~~~~~~~qi~~aL~~LH~~~---ivH~dlkp~Nili~~~~~~kL~Dfg~a~~ 152 (372)
T cd07853 81 VVTELMQ-SDLHKIIV----SPQPLSSDHVKVFLYQILRGLKYLHSAG---ILHRDIKPGNLLVNSNCVLKICDFGLARV 152 (372)
T ss_pred EEeeccc-cCHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCChHHEEECCCCCEEeccccceee
Confidence 9999996 57877774 2346899999999999999999999998 99999999999999999999999999975
Q ss_pred cccccccccccccccccccccchhhhcC-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcc------
Q 003605 562 AMDEESRHISTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLT------ 634 (808)
Q Consensus 562 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~------ 634 (808)
...... .......++..|+|||++.+. .++.++|||||||++|||++|+.||...........+........
T Consensus 153 ~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~~~~~~ 231 (372)
T cd07853 153 EEPDES-KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSLEAMRS 231 (372)
T ss_pred cccCcc-ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCHHHHHH
Confidence 432221 122334578899999998764 578999999999999999999999975432211111000000000
Q ss_pred ccccccccc-C----C-CC--CCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 635 SREGLERII-D----P-SL--GNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 635 ~~~~l~~iv-D----~-~l--~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
..+.....+ . + .. ..........++.+++.+||+.||++|||+.|+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 232 ACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred hhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 000000000 0 0 00 001112234678899999999999999999999765
No 210
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=8.6e-36 Score=316.06 Aligned_cols=253 Identities=28% Similarity=0.411 Sum_probs=196.4
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc-cchhhHHHHHHHHH-HhhcccccceeEEeeeeeccceEEEEe
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV-DQQGGREFLAEVEM-LSRLHHRNLVKLIGICIEEQARCLVYE 485 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~-~~~~~~~f~~Ei~i-L~~L~HpNIV~L~g~~~~~~~~~LV~E 485 (808)
++|++.+.||+|+||.||+++.. +|+.||+|+++.. ......++..|+++ ++.++|+||+++++++..++..++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 47889999999999999999975 6899999999753 23344566677776 555689999999999999999999999
Q ss_pred ecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCcEEeeeecccCeeecCCCcceeccccccccccc
Q 003605 486 LIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHED-SSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMD 564 (808)
Q Consensus 486 y~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~-~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~ 564 (808)
|++ |+|.++++........+++..++.++.|++.||+|||++ + ++||||||+|||++.++.+||+|||+++....
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~---i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~ 156 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLS---VIHRDVKPSNVLINRNGQVKLCDFGISGYLVD 156 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCC---eecCCCCHHHEEECCCCCEEEeeccccccccc
Confidence 995 788888865433445799999999999999999999986 5 99999999999999999999999999876532
Q ss_pred ccccccccccccccccccchhhhc----CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccc
Q 003605 565 EESRHISTRVMGTFGYVAPEYAMT----GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLE 640 (808)
Q Consensus 565 ~~~~~~~~~~~Gt~~Y~APE~l~~----~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~ 640 (808)
. ...+...++..|+|||.+.+ ..++.++|||||||++|||++|+.||...... ...+.... . .
T Consensus 157 ~---~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~-~~~~~~~~----~--~--- 223 (283)
T cd06617 157 S---VAKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTP-FQQLKQVV----E--E--- 223 (283)
T ss_pred c---cccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccC-HHHHHHHH----h--c---
Confidence 2 11233457889999998764 45688999999999999999999998632211 01111100 0 0
Q ss_pred cccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 641 RIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 641 ~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
..+.+ ........+.+++.+||..+|++||++.+|++.
T Consensus 224 --~~~~~---~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 261 (283)
T cd06617 224 --PSPQL---PAEKFSPEFQDFVNKCLKKNYKERPNYPELLQH 261 (283)
T ss_pred --CCCCC---CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00111 011234578999999999999999999999863
No 211
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=1e-35 Score=318.58 Aligned_cols=252 Identities=25% Similarity=0.386 Sum_probs=200.2
Q ss_pred CcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc---chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEe
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD---QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYE 485 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~---~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~E 485 (808)
.|+..++||+|+||.||++... +++.||||.+.... ....+.+.+|+.++++++|+|++.+++.+.+.+..++|||
T Consensus 1 ~f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e 80 (285)
T cd05630 1 TFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEE
Confidence 3677899999999999999865 78899999986432 2234567889999999999999999999999999999999
Q ss_pred ecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccc
Q 003605 486 LIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDE 565 (808)
Q Consensus 486 y~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~ 565 (808)
|+++++|.++++.. ....+++.+++.++.|++.||+|||+.+ |+||||||+||++++++.++|+|||++......
T Consensus 81 ~~~g~~L~~~l~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~---iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~ 155 (285)
T cd05630 81 LMNGGDLKFHIYHM--GEAGFEEGRAVFYAAEICCGLEDLHQER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEG 155 (285)
T ss_pred ecCCCcHHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCCCHHHEEECCCCCEEEeeccceeecCCC
Confidence 99999999998642 2235899999999999999999999987 999999999999999999999999998754322
Q ss_pred cccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCC
Q 003605 566 ESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDP 645 (808)
Q Consensus 566 ~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~ 645 (808)
. ......|+..|+|||++.+..++.++|||||||++|||++|+.||.......... .+ ..+.+.
T Consensus 156 ~---~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~~~--~~-----------~~~~~~ 219 (285)
T cd05630 156 Q---TIKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKRE--EV-----------ERLVKE 219 (285)
T ss_pred c---cccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccchHH--HH-----------Hhhhhh
Confidence 1 1123468999999999999999999999999999999999999997532211100 00 000000
Q ss_pred CCCCCCChhhHHHHHHHHHHccccCCCCCCC-----HHHHHHH
Q 003605 646 SLGNDVPFDSVAKVAAIASMCVQPEVQHRPF-----MGEVVQA 683 (808)
Q Consensus 646 ~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs-----m~eVl~~ 683 (808)
....++......+.+++.+||+.||++||+ +.|+++.
T Consensus 220 -~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~h 261 (285)
T cd05630 220 -VQEEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKEH 261 (285)
T ss_pred -hhhhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHcC
Confidence 001122233456889999999999999999 7888764
No 212
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=6.4e-36 Score=333.50 Aligned_cols=261 Identities=20% Similarity=0.259 Sum_probs=202.5
Q ss_pred HHHHHHHhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc---cchhhHHHHHHHHHHhhcccccceeEEeeeee
Q 003605 401 ASEIEKATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV---DQQGGREFLAEVEMLSRLHHRNLVKLIGICIE 476 (808)
Q Consensus 401 ~~el~~at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~---~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~ 476 (808)
..++....++|++.+.||+|+||.||++... +++.+|+|++... .....+.+.+|+++++.++|+||+++++++.+
T Consensus 35 ~~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~ 114 (371)
T cd05622 35 IRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQD 114 (371)
T ss_pred HhhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEc
Confidence 4455556789999999999999999999976 6789999998642 22334568899999999999999999999999
Q ss_pred ccceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccc
Q 003605 477 EQARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDF 556 (808)
Q Consensus 477 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DF 556 (808)
.+..++||||+++|+|.++++. ..++...+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+||
T Consensus 115 ~~~~~lv~Ey~~gg~L~~~~~~-----~~~~~~~~~~~~~qi~~aL~~LH~~~---ivHrDLkp~NIll~~~~~ikL~Df 186 (371)
T cd05622 115 DRYLYMVMEYMPGGDLVNLMSN-----YDVPEKWARFYTAEVVLALDAIHSMG---FIHRDVKPDNMLLDKSGHLKLADF 186 (371)
T ss_pred CCEEEEEEcCCCCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHCC---EEeCCCCHHHEEECCCCCEEEEeC
Confidence 9999999999999999999852 24788888999999999999999998 999999999999999999999999
Q ss_pred ccccccccccccccccccccccccccchhhhcC----CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhh
Q 003605 557 GLARSAMDEESRHISTRVMGTFGYVAPEYAMTG----HLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPL 632 (808)
Q Consensus 557 GLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~----~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~ 632 (808)
|+++...... ........||+.|+|||++... .++.++|||||||+||||++|+.||..... ......+
T Consensus 187 G~a~~~~~~~-~~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~------~~~~~~i 259 (371)
T cd05622 187 GTCMKMNKEG-MVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL------VGTYSKI 259 (371)
T ss_pred CceeEcCcCC-cccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCH------HHHHHHH
Confidence 9998653322 1122345699999999998754 378999999999999999999999964321 1111111
Q ss_pred cccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCC--CCCHHHHHHHH
Q 003605 633 LTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQH--RPFMGEVVQAL 684 (808)
Q Consensus 633 ~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~--RPsm~eVl~~L 684 (808)
+..... +.-.........+.+++.+|+..++.+ |+++.|+++..
T Consensus 260 ~~~~~~--------~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h~ 305 (371)
T cd05622 260 MNHKNS--------LTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRHL 305 (371)
T ss_pred HcCCCc--------ccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcCc
Confidence 111100 000011234567888999999854443 77888887754
No 213
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=5.4e-36 Score=316.52 Aligned_cols=239 Identities=23% Similarity=0.441 Sum_probs=188.6
Q ss_pred eeeeecCcEEEEEEEeeC-------------CCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceE
Q 003605 415 RILGEGGFGLVYSGVLDD-------------GTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARC 481 (808)
Q Consensus 415 ~~LG~G~fG~VYkg~l~d-------------g~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~ 481 (808)
+.||+|+||.||+|++.+ ...|++|.+..........|.+|+.+++.++|+||+++++++..+...+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 368999999999998542 2258899887655555668899999999999999999999999989999
Q ss_pred EEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCc-------ceec
Q 003605 482 LVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFT-------PKVS 554 (808)
Q Consensus 482 LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~-------vKL~ 554 (808)
+||||+++|+|+.+++. ....+++..+++|+.|+++||+|||+.+ |+||||||+|||++.++. ++++
T Consensus 81 lv~e~~~~~~l~~~~~~---~~~~~~~~~~~~i~~qi~~~l~~lH~~~---ivH~dlkp~Nill~~~~~~~~~~~~~~l~ 154 (262)
T cd05077 81 MVEEFVEFGPLDLFMHR---KSDVLTTPWKFKVAKQLASALSYLEDKD---LVHGNVCTKNILLAREGIDGECGPFIKLS 154 (262)
T ss_pred EEEecccCCCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHhhhCC---eECCCCCcccEEEecCCccCCCCceeEeC
Confidence 99999999999998853 2346899999999999999999999988 999999999999987654 8999
Q ss_pred ccccccccccccccccccccccccccccchhhh-cCCCccccceeeHHHHHHHHH-hCCCCCCCCCCCCcchhHHhhhhh
Q 003605 555 DFGLARSAMDEESRHISTRVMGTFGYVAPEYAM-TGHLLVKSDVYSYGVVILELL-SGRKPVDMTQPPGQENLVAWARPL 632 (808)
Q Consensus 555 DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~-~~~~s~kSDVwSfGvvLlELl-TG~~P~~~~~~~~~~~lv~w~~~~ 632 (808)
|||++...... ....++..|+|||++. +..++.++|||||||++|||+ +|+.|+........ ..
T Consensus 155 d~g~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~----~~---- 220 (262)
T cd05077 155 DPGIPITVLSR------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAEK----ER---- 220 (262)
T ss_pred CCCCCccccCc------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhHH----HH----
Confidence 99998654321 1234778899999886 466899999999999999998 58888753221100 00
Q ss_pred cccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 003605 633 LTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQAL 684 (808)
Q Consensus 633 ~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~L 684 (808)
+...... ........+.+|+.+||+.||++||++.+|++.|
T Consensus 221 ---------~~~~~~~--~~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 221 ---------FYEGQCM--LVTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred ---------HHhcCcc--CCCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 0000000 0112235788999999999999999999998876
No 214
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=8.6e-36 Score=313.40 Aligned_cols=249 Identities=23% Similarity=0.419 Sum_probs=199.0
Q ss_pred CcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccc---------hhhHHHHHHHHHHhhcccccceeEEeeeeeccc
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQ---------QGGREFLAEVEMLSRLHHRNLVKLIGICIEEQA 479 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~---------~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~ 479 (808)
+|.+.+.||+|+||.||+|... +++.+|+|.+..... ...+.+.+|++++++++|+||+++++++.+.+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 3667789999999999999864 678999998864221 123568899999999999999999999999999
Q ss_pred eEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccc
Q 003605 480 RCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLA 559 (808)
Q Consensus 480 ~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa 559 (808)
.++|+||+++++|.+++.. ...+++..+..++.|++.||+|||+.+ ++||||+|+||++++++.+||+|||++
T Consensus 81 ~~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~~l~~~l~~lH~~~---ivH~di~p~nil~~~~~~~~l~dfg~~ 153 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNN----YGAFEETLVRNFVRQILKGLNYLHNRG---IIHRDIKGANILVDNKGGIKISDFGIS 153 (267)
T ss_pred cEEEEEecCCCCHHHHHHh----ccCccHHHHHHHHHHHHHHHHHHHhcC---cccccCCHHHEEEcCCCCEEecccCCC
Confidence 9999999999999999953 245889999999999999999999988 999999999999999999999999999
Q ss_pred ccccccccc----ccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccc
Q 003605 560 RSAMDEESR----HISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTS 635 (808)
Q Consensus 560 ~~~~~~~~~----~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~ 635 (808)
+........ .......|+..|+|||.+.+..++.++|||||||++|||++|+.||...... ..+ .
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~~-~-------- 222 (267)
T cd06628 154 KKLEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQL--QAI-F-------- 222 (267)
T ss_pred cccccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHH--HHH-H--------
Confidence 865421111 0111245788999999999888999999999999999999999999643210 000 0
Q ss_pred ccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 636 REGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 636 ~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
.+.. ......+......+.+++.+||+.+|++||++.||++
T Consensus 223 -----~~~~-~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 223 -----KIGE-NASPEIPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred -----HHhc-cCCCcCCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 0000 0111122334567889999999999999999999976
No 215
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=7.4e-36 Score=315.64 Aligned_cols=257 Identities=25% Similarity=0.425 Sum_probs=203.6
Q ss_pred CCcceeeeeeecCcEEEEEEEee------CCCEEEEEEeecccch-hhHHHHHHHHHHhhcccccceeEEeeeeeccceE
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD------DGTKVAVKVLKRVDQQ-GGREFLAEVEMLSRLHHRNLVKLIGICIEEQARC 481 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~------dg~~VAVK~lk~~~~~-~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~ 481 (808)
++|+..+.||+|+||.||+|+.. +.+.|++|.+...... ..++|.+|++++++++|+||+++++++.+.+..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 56888899999999999999864 3467999988654333 4578999999999999999999999999989999
Q ss_pred EEEeecCCCCccccccccccC-----CCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccc
Q 003605 482 LVYELIPNGSVESHLHGVDKE-----SAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDF 556 (808)
Q Consensus 482 LV~Ey~~~GsL~~~L~~~~~~-----~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DF 556 (808)
+||||+++|+|.++++..... ...++|..++.++.|++.||+|||+.+ |+||||||+|||++.++.++|+||
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dlkp~Nili~~~~~~~l~~~ 161 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNAR---FVHRDLAARNCLVSSQREVKVSLL 161 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcC---cccCcCccceEEEeCCCcEEEccc
Confidence 999999999999999743321 125899999999999999999999988 999999999999999999999999
Q ss_pred ccccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhccc
Q 003605 557 GLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTS 635 (808)
Q Consensus 557 GLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~ 635 (808)
|+++....... .......++..|+|||.+.+...+.++||||||+++|||++ |..||..... ..++....
T Consensus 162 ~~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~---~~~~~~~~----- 232 (275)
T cd05046 162 SLSKDVYNSEY-YKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD---EEVLNRLQ----- 232 (275)
T ss_pred ccccccCcccc-cccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccch---HHHHHHHH-----
Confidence 99875432211 11223346778999999988888999999999999999999 7888853221 11111111
Q ss_pred ccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 003605 636 REGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALK 685 (808)
Q Consensus 636 ~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le 685 (808)
...+....+......+.+++.+||+.+|++||++.|+++.|.
T Consensus 233 --------~~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 233 --------AGKLELPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred --------cCCcCCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 000001112234467999999999999999999999998875
No 216
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=4.3e-36 Score=331.35 Aligned_cols=264 Identities=22% Similarity=0.296 Sum_probs=197.9
Q ss_pred HhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc--cchhhHHHHHHHHHHhhcccccceeEEeeeeec------
Q 003605 407 ATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV--DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEE------ 477 (808)
Q Consensus 407 at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~--~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~------ 477 (808)
..++|...+.||+|+||.||++... .++.||||+++.. .....+++.+|+.+++.++|+||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 5578999999999999999999864 6889999999743 333456788999999999999999999988643
Q ss_pred cceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccc
Q 003605 478 QARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFG 557 (808)
Q Consensus 478 ~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFG 557 (808)
...++||||++ ++|.+++. ..+++..+..++.|+++||+|||+.+ |+||||||+||||+.++.+||+|||
T Consensus 95 ~~~~lv~e~~~-~~l~~~~~------~~l~~~~~~~~~~qi~~aL~~LH~~g---ivHrDikp~Nill~~~~~~kl~Dfg 164 (355)
T cd07874 95 QDVYLVMELMD-ANLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 164 (355)
T ss_pred ceeEEEhhhhc-ccHHHHHh------hcCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEECCCCCEEEeeCc
Confidence 34699999996 46766663 24889999999999999999999988 9999999999999999999999999
Q ss_pred cccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcch-hH----------
Q 003605 558 LARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQEN-LV---------- 626 (808)
Q Consensus 558 La~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~-lv---------- 626 (808)
+++..... .......||..|+|||++.+..++.++|||||||++|||++|+.||.......... ..
T Consensus 165 ~~~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 241 (355)
T cd07874 165 LARTAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEF 241 (355)
T ss_pred ccccCCCc---cccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHH
Confidence 99754321 12233568999999999999899999999999999999999999996533111000 00
Q ss_pred -----HhhhhhcccccccccccCCC------C--CCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 627 -----AWARPLLTSREGLERIIDPS------L--GNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 627 -----~w~~~~~~~~~~l~~ivD~~------l--~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
...............+..+. . ...........+.+++.+||+.||++|||+.|+++.
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 242 MKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HHhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 00000000000000000000 0 001111234578899999999999999999999875
No 217
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.6e-36 Score=332.50 Aligned_cols=192 Identities=24% Similarity=0.355 Sum_probs=164.9
Q ss_pred HhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEe
Q 003605 407 ATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYE 485 (808)
Q Consensus 407 at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~E 485 (808)
...+|.+.+.||+|+||.||+|... +++.||+|..... ....|+.++++++|+||+++++++.+.+..++|+|
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 137 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP 137 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence 4467999999999999999999975 5678999975432 34569999999999999999999999999999999
Q ss_pred ecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccc
Q 003605 486 LIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDE 565 (808)
Q Consensus 486 y~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~ 565 (808)
|+ .++|.+++.. ....++|..++.|+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++.....
T Consensus 138 ~~-~~~l~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~ 210 (357)
T PHA03209 138 HY-SSDLYTYLTK---RSRPLPIDQALIIEKQILEGLRYLHAQR---IIHRDVKTENIFINDVDQVCIGDLGAAQFPVVA 210 (357)
T ss_pred cc-CCcHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEecCccccccccC
Confidence 99 5688888853 3346899999999999999999999998 999999999999999999999999998743221
Q ss_pred cccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCC
Q 003605 566 ESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPV 614 (808)
Q Consensus 566 ~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~ 614 (808)
.......||..|+|||++.+..++.++|||||||++|||+++..++
T Consensus 211 ---~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~ 256 (357)
T PHA03209 211 ---PAFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTI 256 (357)
T ss_pred ---cccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCcc
Confidence 1122356899999999999999999999999999999999966554
No 218
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=3.5e-36 Score=328.34 Aligned_cols=241 Identities=23% Similarity=0.301 Sum_probs=189.4
Q ss_pred eeeeecCcEEEEEEEee-CCCEEEEEEeeccc---chhhHHHHHHHH-HHhhcccccceeEEeeeeeccceEEEEeecCC
Q 003605 415 RILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD---QQGGREFLAEVE-MLSRLHHRNLVKLIGICIEEQARCLVYELIPN 489 (808)
Q Consensus 415 ~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~---~~~~~~f~~Ei~-iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~~ 489 (808)
+.||+|+||+||+++.. +++.||+|++.... .....++..|.. +++.++|+||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 46999999999999975 67889999997422 222344555544 56778999999999999999999999999999
Q ss_pred CCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccccc
Q 003605 490 GSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRH 569 (808)
Q Consensus 490 GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~ 569 (808)
|+|.+++.. ...+.+.....++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 ~~L~~~~~~----~~~~~~~~~~~~~~qi~~~L~~lH~~g---iiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~--~ 151 (325)
T cd05602 81 GELFYHLQR----ERCFLEPRARFYAAEIASALGYLHSLN---IVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN--G 151 (325)
T ss_pred CcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEecCCCHHHeEECCCCCEEEccCCCCcccccCC--C
Confidence 999999853 235778888899999999999999998 9999999999999999999999999987543221 1
Q ss_pred cccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCC
Q 003605 570 ISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGN 649 (808)
Q Consensus 570 ~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~ 649 (808)
......||..|+|||++.+..++.++|||||||++|||++|+.||..... ...... ... ..+
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~---~~~~~~---i~~----------~~~-- 213 (325)
T cd05602 152 TTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNT---AEMYDN---ILN----------KPL-- 213 (325)
T ss_pred CcccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCH---HHHHHH---HHh----------CCc--
Confidence 22345699999999999999999999999999999999999999964321 111111 111 000
Q ss_pred CCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 650 DVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 650 ~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
.........+.+++.+|++.+|++|+++.+.+.
T Consensus 214 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~ 246 (325)
T cd05602 214 QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFM 246 (325)
T ss_pred CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHH
Confidence 111233467889999999999999999876543
No 219
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=8.8e-36 Score=318.90 Aligned_cols=252 Identities=25% Similarity=0.391 Sum_probs=201.5
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeec
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELI 487 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~ 487 (808)
++|++.+.||+|+||.||+|... +++.|++|.+........+++.+|++++++++|+||+++++++..++..++||||+
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 91 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC 91 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence 56888899999999999999975 58899999998766666788999999999999999999999999999999999999
Q ss_pred CCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccc
Q 003605 488 PNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEES 567 (808)
Q Consensus 488 ~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~ 567 (808)
++++|..++.. ....+++..++.++.|++.||+|||+.+ ++||||||+||+++.++++||+|||++......
T Consensus 92 ~~~~l~~~~~~---~~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~-- 163 (292)
T cd06644 92 PGGAVDAIMLE---LDRGLTEPQIQVICRQMLEALQYLHSMK---IIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKT-- 163 (292)
T ss_pred CCCcHHHHHHh---hcCCCCHHHHHHHHHHHHHHHHHHhcCC---eeecCCCcceEEEcCCCCEEEccCccceecccc--
Confidence 99999888753 2345899999999999999999999987 999999999999999999999999998753221
Q ss_pred cccccccccccccccchhhh-----cCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccc
Q 003605 568 RHISTRVMGTFGYVAPEYAM-----TGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERI 642 (808)
Q Consensus 568 ~~~~~~~~Gt~~Y~APE~l~-----~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~i 642 (808)
........++..|+|||++. ...++.++|||||||++|||++|+.||...... .....+. ..
T Consensus 164 ~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~--~~~~~~~----~~------- 230 (292)
T cd06644 164 LQRRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPM--RVLLKIA----KS------- 230 (292)
T ss_pred ccccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHH--HHHHHHh----cC-------
Confidence 11123345788999999884 345678999999999999999999998643211 1111110 00
Q ss_pred cCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 643 IDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 643 vD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
..+.+ ..+......+.+++.+||..+|++||++.||++.
T Consensus 231 ~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 269 (292)
T cd06644 231 EPPTL--SQPSKWSMEFRDFLKTALDKHPETRPSAAQLLEH 269 (292)
T ss_pred CCccC--CCCcccCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 00000 1122334578899999999999999999999763
No 220
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=1.2e-35 Score=310.07 Aligned_cols=250 Identities=22% Similarity=0.343 Sum_probs=200.9
Q ss_pred CcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc--cchhhHHHHHHHHHHhhcccccceeEEeeeeec-cceEEEEe
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV--DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEE-QARCLVYE 485 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~--~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~-~~~~LV~E 485 (808)
+|++.+.||+|++|.||++... +++.||+|++... .....+.+.+|++++++++|+|++++++.+... ...+++||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4888999999999999999965 5788999998643 234456789999999999999999999987644 45789999
Q ss_pred ecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccc
Q 003605 486 LIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDE 565 (808)
Q Consensus 486 y~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~ 565 (808)
|+++++|.++++.. ....+++.+++.++.+++.||+|||+.+ ++||||||+||+++.++.++|+|||++......
T Consensus 81 ~~~~~~l~~~l~~~--~~~~l~~~~~~~~~~~l~~~l~~lH~~~---i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~ 155 (257)
T cd08223 81 FCEGGDLYHKLKEQ--KGKLLPENQVVEWFVQIAMALQYLHEKH---ILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQ 155 (257)
T ss_pred ccCCCcHHHHHHHh--cCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCchhEEEecCCcEEEecccceEEeccc
Confidence 99999999999642 2346899999999999999999999998 999999999999999999999999998765322
Q ss_pred cccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCC
Q 003605 566 ESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDP 645 (808)
Q Consensus 566 ~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~ 645 (808)
. .......++..|+|||++.+..++.++||||||++++||++|+.||+... ...+.......
T Consensus 156 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~------~~~~~~~~~~~---------- 217 (257)
T cd08223 156 C--DMASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKD------MNSLVYRIIEG---------- 217 (257)
T ss_pred C--CccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCC------HHHHHHHHHhc----------
Confidence 1 12234567889999999999999999999999999999999999986422 11111111110
Q ss_pred CCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 646 SLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 646 ~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
. ....+......+.+++.+|++.+|++||++.++++.
T Consensus 218 ~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 254 (257)
T cd08223 218 K-LPPMPKDYSPELGELIATMLSKRPEKRPSVKSILRQ 254 (257)
T ss_pred C-CCCCccccCHHHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0 011223344679999999999999999999999763
No 221
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=1e-35 Score=310.02 Aligned_cols=247 Identities=26% Similarity=0.440 Sum_probs=200.5
Q ss_pred CcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc-----chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEE
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD-----QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLV 483 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~-----~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV 483 (808)
+|+..+.||+|+||.||+|... +++.|++|.+.... .+..+.+.+|++++++++|+||+++++++.+.+..+++
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4667789999999999999976 78999999986432 23456899999999999999999999999999999999
Q ss_pred EeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccc
Q 003605 484 YELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAM 563 (808)
Q Consensus 484 ~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~ 563 (808)
+||+++++|.++++. ...+++..++.++.|++.||+|||+.+ ++|+||+|+||+++.++.+||+|||++....
T Consensus 81 ~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~ 153 (258)
T cd06632 81 LELVPGGSLAKLLKK----YGSFPEPVIRLYTRQILLGLEYLHDRN---TVHRDIKGANILVDTNGVVKLADFGMAKQVV 153 (258)
T ss_pred EEecCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccceecc
Confidence 999999999999853 235889999999999999999999988 9999999999999999999999999987643
Q ss_pred cccccccccccccccccccchhhhcCC-CccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccc
Q 003605 564 DEESRHISTRVMGTFGYVAPEYAMTGH-LLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERI 642 (808)
Q Consensus 564 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~-~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~i 642 (808)
... ......++..|++||.+.... ++.++|||||||++|||++|+.||..... ......+. . ....
T Consensus 154 ~~~---~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~--~~~~~~~~----~-~~~~--- 220 (258)
T cd06632 154 EFS---FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEG--VAAVFKIG----R-SKEL--- 220 (258)
T ss_pred ccc---cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcH--HHHHHHHH----h-cccC---
Confidence 322 123456888999999988776 89999999999999999999999964331 11111110 0 0000
Q ss_pred cCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 643 IDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 643 vD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
...+......+.+++.+||+.+|++||++.++++
T Consensus 221 ------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 221 ------PPIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred ------CCcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 1122233467889999999999999999999975
No 222
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.2e-35 Score=319.74 Aligned_cols=251 Identities=25% Similarity=0.380 Sum_probs=204.2
Q ss_pred hCCcceeeeeeecCcEEEEEEEe-eCCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEee
Q 003605 408 TGNFDASRILGEGGFGLVYSGVL-DDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l-~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
..+|...+.||+|+||.||++.. .+++.||+|.+........+.+.+|+.+++.++|+||+++++++...+..++||||
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 97 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 97 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecc
Confidence 36788999999999999999996 47899999999865555567889999999999999999999999999999999999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEE 566 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~ 566 (808)
+++++|.+++.. ..+++.+++.++.+++.||+|||+.+ ++||||||+|||++.++.++|+|||++.......
T Consensus 98 ~~~~~L~~~~~~-----~~~~~~~~~~~~~~l~~~L~~LH~~~---i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~ 169 (297)
T cd06656 98 LAGGSLTDVVTE-----TCMDEGQIAAVCRECLQALDFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQ 169 (297)
T ss_pred cCCCCHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEECcCccceEccCCc
Confidence 999999999852 35889999999999999999999988 9999999999999999999999999987543221
Q ss_pred ccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCC
Q 003605 567 SRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPS 646 (808)
Q Consensus 567 ~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~ 646 (808)
.......++..|+|||++.+..++.++|||||||++|+|++|+.||........ +.. ... ... +.
T Consensus 170 --~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~--~~~----~~~--~~~-----~~ 234 (297)
T cd06656 170 --SKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA--LYL----IAT--NGT-----PE 234 (297)
T ss_pred --cCcCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchh--eee----ecc--CCC-----CC
Confidence 112334688899999999988899999999999999999999999964332110 000 000 000 00
Q ss_pred CCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 647 LGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 647 l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
...+......+.+++.+||+.+|++||++++|++.
T Consensus 235 --~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (297)
T cd06656 235 --LQNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQH 269 (297)
T ss_pred --CCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 01122334567899999999999999999999873
No 223
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=1.2e-35 Score=316.15 Aligned_cols=264 Identities=23% Similarity=0.283 Sum_probs=193.8
Q ss_pred CcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc--chhhHHHHHHHHHHhhc---ccccceeEEeeeeec-----c
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD--QQGGREFLAEVEMLSRL---HHRNLVKLIGICIEE-----Q 478 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~--~~~~~~f~~Ei~iL~~L---~HpNIV~L~g~~~~~-----~ 478 (808)
+|++.+.||+|+||+||+|... +++.||+|.++... ......+.+|++++.++ +|+||+++++++... .
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 5788999999999999999865 68899999987432 22234566788877766 699999999998642 4
Q ss_pred ceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccc
Q 003605 479 ARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGL 558 (808)
Q Consensus 479 ~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGL 558 (808)
..++||||+. ++|.++++... ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~~---ivH~dikp~Nili~~~~~~kl~dfg~ 154 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVP--PPGLPAETIKDLMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGQVKLADFGL 154 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccCc
Confidence 5799999997 58888886422 235899999999999999999999998 99999999999999999999999999
Q ss_pred ccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCc-chhHHhhhhhcccc-
Q 003605 559 ARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQ-ENLVAWARPLLTSR- 636 (808)
Q Consensus 559 a~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~-~~lv~w~~~~~~~~- 636 (808)
++...... ......|+..|+|||++.+..++.++|||||||++|||++|+.||......+. ..+..+........
T Consensus 155 ~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 231 (288)
T cd07863 155 ARIYSCQM---ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDW 231 (288)
T ss_pred cccccCcc---cCCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhC
Confidence 97653221 12335678999999999988999999999999999999999999864322110 01111110000000
Q ss_pred ----cccccccCCCCC---CCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 637 ----EGLERIIDPSLG---NDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 637 ----~~l~~ivD~~l~---~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
........+... .....+....+.+++.+||+.||++||++.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 232 PRDVTLPRGAFSPRGPRPVQSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred cccccccccccCCCCCCchHHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 000000000000 0011133456889999999999999999999875
No 224
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=9.4e-36 Score=315.09 Aligned_cols=249 Identities=25% Similarity=0.362 Sum_probs=202.4
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc-chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEee
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD-QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~-~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
++|+..+.||.|+||.||+|... +++.||+|.+.... ......+.+|+++++.++|+||+++++++.++...++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 46788899999999999999965 68899999987532 34456789999999999999999999999999999999999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEE 566 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~ 566 (808)
+++++|.++++. ..+++..++.++.|++.||+|||+.+ ++||||+|+||++++++.++|+|||+++......
T Consensus 81 ~~~~~L~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~ 152 (274)
T cd06609 81 CGGGSCLDLLKP-----GKLDETYIAFILREVLLGLEYLHEEG---KIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM 152 (274)
T ss_pred eCCCcHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEcccccceeecccc
Confidence 999999999863 26899999999999999999999988 9999999999999999999999999997654321
Q ss_pred ccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCC
Q 003605 567 SRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPS 646 (808)
Q Consensus 567 ~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~ 646 (808)
.......++..|+|||++.+..++.++|||||||++|||+||+.||...... . ....... . ..+.
T Consensus 153 --~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~---~---~~~~~~~--~-----~~~~ 217 (274)
T cd06609 153 --SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPM---R---VLFLIPK--N-----NPPS 217 (274)
T ss_pred --cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchH---H---HHHHhhh--c-----CCCC
Confidence 1123346788999999999988999999999999999999999999643311 1 0000000 0 0111
Q ss_pred CCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 647 LGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 647 l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
+... .....+.+++.+||..+|++||+++++++.
T Consensus 218 ~~~~---~~~~~~~~~l~~~l~~~p~~Rpt~~~il~~ 251 (274)
T cd06609 218 LEGN---KFSKPFKDFVSLCLNKDPKERPSAKELLKH 251 (274)
T ss_pred Cccc---ccCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 1111 134568899999999999999999999764
No 225
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=1.6e-35 Score=309.45 Aligned_cols=251 Identities=24% Similarity=0.353 Sum_probs=203.9
Q ss_pred CcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc--cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEee
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV--DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~--~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
+|+..++||+|+||.||.+... +++.+++|.+... .....+++.+|++++++++|+||+++++++.+.+..+++|||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 5888999999999999988854 6889999998642 345567899999999999999999999999999999999999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEE 566 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~ 566 (808)
+++++|.+++.... ...+++.+++.++.|+++||+|||+.+ ++|+||+|+||++++++.+||+|||+++......
T Consensus 81 ~~~~~L~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~ 155 (256)
T cd08221 81 ANGGTLYDKIVRQK--GQLFEEEMVLWYLFQIVSAVSYIHKAG---ILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEY 155 (256)
T ss_pred cCCCcHHHHHHhcc--ccCCCHHHHHHHHHHHHHHHHHHHhCC---ccccCCChHhEEEeCCCCEEECcCcceEEccccc
Confidence 99999999996422 346899999999999999999999988 9999999999999999999999999997653322
Q ss_pred ccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCC
Q 003605 567 SRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPS 646 (808)
Q Consensus 567 ~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~ 646 (808)
. ......++..|+|||++.+..++.++||||||+++|||++|+.||+..... ........ ..
T Consensus 156 ~--~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~~------~~~~~~~~----------~~ 217 (256)
T cd08221 156 S--MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNPL------NLVVKIVQ----------GN 217 (256)
T ss_pred c--cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCHH------HHHHHHHc----------CC
Confidence 1 223456889999999998888899999999999999999999998643211 11111110 00
Q ss_pred CCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 003605 647 LGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQAL 684 (808)
Q Consensus 647 l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~L 684 (808)
+ ..........+.+++.+|++.+|++||++.|+++.+
T Consensus 218 ~-~~~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~~ 254 (256)
T cd08221 218 Y-TPVVSVYSSELISLVHSLLQQDPEKRPTADEVLDQP 254 (256)
T ss_pred C-CCCccccCHHHHHHHHHHcccCcccCCCHHHHhhCc
Confidence 0 011123346788999999999999999999998753
No 226
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1e-35 Score=320.46 Aligned_cols=250 Identities=24% Similarity=0.375 Sum_probs=204.0
Q ss_pred CCcceeeeeeecCcEEEEEEEe-eCCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeec
Q 003605 409 GNFDASRILGEGGFGLVYSGVL-DDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELI 487 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l-~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~ 487 (808)
.+|+..+.||.|+||.||+|+. .+++.||+|.+........+.+.+|+++++.++|+||+++++++...+..++|+||+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 4689999999999999999985 478999999997655555678899999999999999999999999999999999999
Q ss_pred CCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccc
Q 003605 488 PNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEES 567 (808)
Q Consensus 488 ~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~ 567 (808)
++++|.+++.. ..++|.+++.++.+++.||+|||+.+ ++||||||+||+++.++.+||+|||++........
T Consensus 99 ~~~~L~~~~~~-----~~l~~~~~~~i~~~l~~al~~LH~~~---i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~ 170 (296)
T cd06655 99 AGGSLTDVVTE-----TCMDEAQIAAVCRECLQALEFLHANQ---VIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS 170 (296)
T ss_pred CCCcHHHHHHh-----cCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEccCccchhcccccc
Confidence 99999998852 35899999999999999999999998 99999999999999999999999999875433221
Q ss_pred cccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCC
Q 003605 568 RHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSL 647 (808)
Q Consensus 568 ~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l 647 (808)
......++..|+|||.+.+..++.++|||||||++|||++|+.||...... ..+... .... .. .+
T Consensus 171 --~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~--~~~~~~----~~~~--~~-----~~ 235 (296)
T cd06655 171 --KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPL--RALYLI----ATNG--TP-----EL 235 (296)
T ss_pred --cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHH----HhcC--Cc-----cc
Confidence 122346888999999999888999999999999999999999999653321 111100 0000 00 00
Q ss_pred CCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 648 GNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 648 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
..+......+.+++.+||..+|++||++.+|++.
T Consensus 236 --~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~~ 269 (296)
T cd06655 236 --QNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQH 269 (296)
T ss_pred --CCcccCCHHHHHHHHHHhhcChhhCCCHHHHhhC
Confidence 1122334578899999999999999999999754
No 227
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=1.8e-35 Score=313.60 Aligned_cols=263 Identities=24% Similarity=0.311 Sum_probs=200.4
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc--chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEe
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD--QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYE 485 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~--~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~E 485 (808)
++|+..+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++|+||+++++++......++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 47888999999999999999976 68999999986432 2334578899999999999999999999999999999999
Q ss_pred ecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccc
Q 003605 486 LIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDE 565 (808)
Q Consensus 486 y~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~ 565 (808)
|+++++|..++. ....++|..++.++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++......
T Consensus 81 ~~~~~~l~~~~~----~~~~~~~~~~~~~~~ql~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07847 81 YCDHTVLNELEK----NPRGVPEHLIKKIIWQTLQAVNFCHKHN---CIHRDVKPENILITKQGQIKLCDFGFARILTGP 153 (286)
T ss_pred ccCccHHHHHHh----CCCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCChhhEEEcCCCcEEECccccceecCCC
Confidence 999988888764 2235899999999999999999999988 999999999999999999999999999865432
Q ss_pred cccccccccccccccccchhhhc-CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhh---hhcc-------
Q 003605 566 ESRHISTRVMGTFGYVAPEYAMT-GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWAR---PLLT------- 634 (808)
Q Consensus 566 ~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~---~~~~------- 634 (808)
.. ......++..|+|||++.+ ..++.++|||||||++|||++|+.||......+ .+..... ....
T Consensus 154 ~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 229 (286)
T cd07847 154 GD--DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVD--QLYLIRKTLGDLIPRHQQIFS 229 (286)
T ss_pred cc--cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHH--HHHHHHHHhCCCChHHhhhcc
Confidence 21 1223457789999999876 557899999999999999999999996543211 1111110 0000
Q ss_pred cccccccccCCCCCCCCC-----hhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 635 SREGLERIIDPSLGNDVP-----FDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 635 ~~~~l~~ivD~~l~~~~~-----~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
.......+..+......+ ......+.+++.+|++.+|++||++.|+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 230 TNQFFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred cccccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 000000000111100000 122467889999999999999999999875
No 228
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=9.8e-36 Score=334.06 Aligned_cols=263 Identities=21% Similarity=0.259 Sum_probs=199.7
Q ss_pred hCCcceeeeeeecCcEEEEEEEee---CCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEE
Q 003605 408 TGNFDASRILGEGGFGLVYSGVLD---DGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVY 484 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l~---dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~ 484 (808)
..+|.+.+.||+|+||.||++... .+..||||.+... +.+.+|+++|++++|+||+++++++...+..++||
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 165 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM 165 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence 467999999999999999999753 3578999988643 34568999999999999999999999999999999
Q ss_pred eecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccc
Q 003605 485 ELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMD 564 (808)
Q Consensus 485 Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~ 564 (808)
|++. ++|.+++. ....++|.+++.|+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....
T Consensus 166 e~~~-~~l~~~l~----~~~~l~~~~~~~i~~ql~~aL~~LH~~g---ivHrDlkp~Nill~~~~~~~l~DfG~a~~~~~ 237 (392)
T PHA03207 166 PKYK-CDLFTYVD----RSGPLPLEQAITIQRRLLEALAYLHGRG---IIHRDVKTENIFLDEPENAVLGDFGAACKLDA 237 (392)
T ss_pred hhcC-CCHHHHHH----hcCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEccCccccccCc
Confidence 9995 68888883 2346999999999999999999999998 99999999999999999999999999976544
Q ss_pred ccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccc------cc-
Q 003605 565 EESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTS------RE- 637 (808)
Q Consensus 565 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~------~~- 637 (808)
...........||..|+|||++....++.++|||||||+||||++|+.||.............-+...+.. ..
T Consensus 238 ~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~ 317 (392)
T PHA03207 238 HPDTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNG 317 (392)
T ss_pred ccccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCcc
Confidence 33322333467999999999999999999999999999999999999999654432211111000000000 00
Q ss_pred --cccc---ccCCCCCCCCC-------hhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 638 --GLER---IIDPSLGNDVP-------FDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 638 --~l~~---ivD~~l~~~~~-------~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
.+.+ .........+. ......+.+++.+||..||++||++.|++..
T Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 318 STNLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred chhHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0000 00000000000 1123467889999999999999999999876
No 229
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.2e-36 Score=336.15 Aligned_cols=260 Identities=30% Similarity=0.453 Sum_probs=218.1
Q ss_pred HhCCcceeeeeeecCcEEEEEEEeeC---C--CEEEEEEeec-ccchhhHHHHHHHHHHhhcccccceeEEeeeeeccce
Q 003605 407 ATGNFDASRILGEGGFGLVYSGVLDD---G--TKVAVKVLKR-VDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQAR 480 (808)
Q Consensus 407 at~~f~~~~~LG~G~fG~VYkg~l~d---g--~~VAVK~lk~-~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~ 480 (808)
..+.....++||+|-||.||+|++.+ | -.||||.-|. ......+.|+.|..+|+.++|||||+|+|+|.+ ...
T Consensus 387 ~Re~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~ 465 (974)
T KOG4257|consen 387 RRELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPM 465 (974)
T ss_pred ehhhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cce
Confidence 34455566899999999999999642 3 3589999886 455667899999999999999999999999986 577
Q ss_pred EEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccc
Q 003605 481 CLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLAR 560 (808)
Q Consensus 481 ~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~ 560 (808)
++|||.++-|-|..||+. +...|+..+...++.||+.||+|||+.. +|||||..+|||+....-+||+||||+|
T Consensus 466 WivmEL~~~GELr~yLq~---nk~sL~l~tL~ly~~Qi~talaYLeSkr---fVHRDIAaRNiLVsSp~CVKLaDFGLSR 539 (974)
T KOG4257|consen 466 WIVMELAPLGELREYLQQ---NKDSLPLRTLTLYCYQICTALAYLESKR---FVHRDIAARNILVSSPQCVKLADFGLSR 539 (974)
T ss_pred eEEEecccchhHHHHHHh---ccccchHHHHHHHHHHHHHHHHHHHhhc---hhhhhhhhhheeecCcceeeecccchhh
Confidence 999999999999999973 4456888999999999999999999887 9999999999999999999999999999
Q ss_pred ccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhccccccc
Q 003605 561 SAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGL 639 (808)
Q Consensus 561 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l 639 (808)
...+....+. ++..-...|||||.+.-++++.+||||-|||.+||++. |..||..-...+ .+
T Consensus 540 ~~ed~~yYka-S~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsD----------------VI 602 (974)
T KOG4257|consen 540 YLEDDAYYKA-SRGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSD----------------VI 602 (974)
T ss_pred hccccchhhc-cccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccc----------------eE
Confidence 8876655444 35556789999999999999999999999999999988 999996433211 11
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHhh
Q 003605 640 ERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLVCNEC 691 (808)
Q Consensus 640 ~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~~~~ 691 (808)
- .+...-+-..|..+...+..|+.+||+.+|.+||++.|+...|.+++++.
T Consensus 603 ~-~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~qee 653 (974)
T KOG4257|consen 603 G-HIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQEE 653 (974)
T ss_pred E-EecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHHHh
Confidence 1 11222233467788899999999999999999999999999999988753
No 230
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1.2e-35 Score=315.15 Aligned_cols=264 Identities=20% Similarity=0.290 Sum_probs=198.3
Q ss_pred CcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc--cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEee
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV--DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~--~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
+|++.+.||+|++|.||+|+.. +++.||||+++.. .....+.+.+|+.++++++|+||+++++++.+++..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4788899999999999999975 6899999998642 223346788999999999999999999999999999999999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEE 566 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~ 566 (808)
++ ++|.++++.... ...+++.+++.++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||++......
T Consensus 81 ~~-~~l~~~~~~~~~-~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~- 154 (285)
T cd07861 81 LS-MDLKKYLDSLPK-GQYMDAELVKSYLYQILQGILFCHSRR---VLHRDLKPQNLLIDNKGVIKLADFGLARAFGIP- 154 (285)
T ss_pred CC-CCHHHHHhcCCC-CCcCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCCHHHEEEcCCCcEEECcccceeecCCC-
Confidence 96 689888864332 346899999999999999999999988 999999999999999999999999998754322
Q ss_pred ccccccccccccccccchhhhcC-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhh----------ccc
Q 003605 567 SRHISTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPL----------LTS 635 (808)
Q Consensus 567 ~~~~~~~~~Gt~~Y~APE~l~~~-~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~----------~~~ 635 (808)
........++..|+|||++.+. .++.++|||||||++|||+||+.||...... ..+....... ...
T Consensus 155 -~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 231 (285)
T cd07861 155 -VRVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEI--DQLFRIFRILGTPTEDVWPGVTS 231 (285)
T ss_pred -cccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHH--HHHHHHHHHhCCCChhhhhcchh
Confidence 1122234578899999988654 4688999999999999999999999643221 1111100000 000
Q ss_pred ccccccccCCCCC---CCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 636 REGLERIIDPSLG---NDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 636 ~~~l~~ivD~~l~---~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
.......++.... .........++.+++.+||+.||++|||+.+|++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 232 LPDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred hHHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0000000000000 0011123467789999999999999999999975
No 231
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=5.7e-36 Score=317.61 Aligned_cols=247 Identities=23% Similarity=0.366 Sum_probs=200.3
Q ss_pred CcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc-cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeec
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV-DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELI 487 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~-~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~ 487 (808)
.|+..+.||+|+||.||+|... +++.||+|.++.. .....+.+.+|++++++++|+||+++++++...+..++||||+
T Consensus 5 ~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06642 5 LFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred HHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEcc
Confidence 3556678999999999999865 6788999998743 2344567999999999999999999999999999999999999
Q ss_pred CCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccc
Q 003605 488 PNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEES 567 (808)
Q Consensus 488 ~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~ 567 (808)
++++|.+++.. ..+.+..+..++.|+++||+|||+.+ ++|+||+|+||++++++.++|+|||++.......
T Consensus 85 ~~~~L~~~~~~-----~~~~~~~~~~~~~~i~~~l~~lH~~~---ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~- 155 (277)
T cd06642 85 GGGSALDLLKP-----GPLEETYIATILREILKGLDYLHSER---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ- 155 (277)
T ss_pred CCCcHHHHhhc-----CCCCHHHHHHHHHHHHHHHHHHhcCC---eeccCCChheEEEeCCCCEEEccccccccccCcc-
Confidence 99999998852 35889999999999999999999987 9999999999999999999999999987654321
Q ss_pred cccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCC
Q 003605 568 RHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSL 647 (808)
Q Consensus 568 ~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l 647 (808)
.......++..|+|||++.+..++.++|||||||++|||++|+.|+...... ....+. ....
T Consensus 156 -~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~---~~~~~~--------------~~~~ 217 (277)
T cd06642 156 -IKRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPM---RVLFLI--------------PKNS 217 (277)
T ss_pred -hhhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchh---hHHhhh--------------hcCC
Confidence 1112345788999999999989999999999999999999999998643221 111100 0000
Q ss_pred CCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 648 GNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 648 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
...........+.+++.+|++.+|++||++.+|++.
T Consensus 218 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06642 218 PPTLEGQYSKPFKEFVEACLNKDPRFRPTAKELLKH 253 (277)
T ss_pred CCCCCcccCHHHHHHHHHHccCCcccCcCHHHHHHh
Confidence 111222345678999999999999999999999985
No 232
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-36 Score=313.88 Aligned_cols=236 Identities=28% Similarity=0.374 Sum_probs=198.0
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc---cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEE
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV---DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVY 484 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~---~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~ 484 (808)
++|+..+.||.|+||+|..++.+ +|..+|+|++++. .....+...+|..+|+.+.||+++++++.|.+.+.++|||
T Consensus 44 ~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymvm 123 (355)
T KOG0616|consen 44 QDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMVM 123 (355)
T ss_pred hhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEEE
Confidence 45677889999999999999976 7889999999753 3344567788999999999999999999999999999999
Q ss_pred eecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccc
Q 003605 485 ELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMD 564 (808)
Q Consensus 485 Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~ 564 (808)
||+++|-|.++|+. ..++++....-+|.+|+.||+|||..+ |++|||||+|||||.+|.+||+|||+|+....
T Consensus 124 eyv~GGElFS~Lrk----~~rF~e~~arFYAAeivlAleylH~~~---iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~ 196 (355)
T KOG0616|consen 124 EYVPGGELFSYLRK----SGRFSEPHARFYAAEIVLALEYLHSLD---IIYRDLKPENLLLDQNGHIKITDFGFAKRVSG 196 (355)
T ss_pred eccCCccHHHHHHh----cCCCCchhHHHHHHHHHHHHHHHHhcC---eeeccCChHHeeeccCCcEEEEeccceEEecC
Confidence 99999999999963 346888999999999999999999998 99999999999999999999999999997643
Q ss_pred ccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccC
Q 003605 565 EESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIID 644 (808)
Q Consensus 565 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD 644 (808)
. +-..+||+.|+|||+++...+..++|.|+|||++|||+.|..||....+. ...++|+.
T Consensus 197 r-----T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~~----------------~iY~KI~~ 255 (355)
T KOG0616|consen 197 R-----TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNPI----------------QIYEKILE 255 (355)
T ss_pred c-----EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCChH----------------HHHHHHHh
Confidence 2 34678999999999999999999999999999999999999999754331 11122222
Q ss_pred CCCCCCCChhhHHHHHHHHHHccccCCCCC
Q 003605 645 PSLGNDVPFDSVAKVAAIASMCVQPEVQHR 674 (808)
Q Consensus 645 ~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~R 674 (808)
..+ .+|.-....+.+|+...++.|-.+|
T Consensus 256 ~~v--~fP~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 256 GKV--KFPSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred Ccc--cCCcccCHHHHHHHHHHHhhhhHhh
Confidence 221 1333445667888888888888777
No 233
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=8.2e-36 Score=313.96 Aligned_cols=252 Identities=23% Similarity=0.352 Sum_probs=199.8
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeec
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELI 487 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~ 487 (808)
++|...+.||+|+||.||+|... +++.||+|.++.........+.+|+.+++.++|+||+++++++...+..++|+||+
T Consensus 9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~~ 88 (267)
T cd06645 9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEFC 88 (267)
T ss_pred HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEecc
Confidence 46777889999999999999864 68899999997655555567889999999999999999999999999999999999
Q ss_pred CCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccc
Q 003605 488 PNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEES 567 (808)
Q Consensus 488 ~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~ 567 (808)
++++|.++++. ...+++.+.+.++.|++.||+|||+.+ ++|+||||+||+++.++.+||+|||++.......
T Consensus 89 ~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~- 160 (267)
T cd06645 89 GGGSLQDIYHV----TGPLSESQIAYVSRETLQGLYYLHSKG---KMHRDIKGANILLTDNGHVKLADFGVSAQITATI- 160 (267)
T ss_pred CCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEECcceeeeEccCcc-
Confidence 99999999853 236899999999999999999999998 9999999999999999999999999987543211
Q ss_pred cccccccccccccccchhhh---cCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccC
Q 003605 568 RHISTRVMGTFGYVAPEYAM---TGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIID 644 (808)
Q Consensus 568 ~~~~~~~~Gt~~Y~APE~l~---~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD 644 (808)
.......|+..|+|||++. .+.++.++|||||||++|||++|+.||....... .+..... . ....
T Consensus 161 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~--~~~~~~~------~---~~~~ 228 (267)
T cd06645 161 -AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMR--ALFLMTK------S---NFQP 228 (267)
T ss_pred -cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchh--hHHhhhc------c---CCCC
Confidence 1123446899999999874 4568899999999999999999999985432211 1100000 0 0000
Q ss_pred CCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 645 PSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 645 ~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
+.+.. .......+.+++.+|++.+|++||++++|++
T Consensus 229 ~~~~~--~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 229 PKLKD--KMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred Ccccc--cCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 11111 0112346889999999999999999999875
No 234
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=6.7e-36 Score=317.20 Aligned_cols=253 Identities=26% Similarity=0.384 Sum_probs=203.5
Q ss_pred hCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEee
Q 003605 408 TGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
.++|++.+.||+|+||.||++... ++..+|+|.++.......++|.+|++++++++|+||+++++++...+..++||||
T Consensus 4 ~~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (280)
T cd06611 4 NDIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEF 83 (280)
T ss_pred hhHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeec
Confidence 356888899999999999999975 6889999999866666677899999999999999999999999999999999999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEE 566 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~ 566 (808)
+++++|.+++.. ....+++.+++.++.|++.||+|||+.+ |+|+||||+||+++.++.++|+|||++.......
T Consensus 84 ~~~~~L~~~~~~---~~~~l~~~~~~~~~~ql~~~l~~lh~~~---i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~ 157 (280)
T cd06611 84 CDGGALDSIMLE---LERGLTEPQIRYVCRQMLEALNFLHSHK---VIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTL 157 (280)
T ss_pred cCCCcHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEECCCCCEEEccCccchhhcccc
Confidence 999999999863 2346899999999999999999999998 9999999999999999999999999987543221
Q ss_pred ccccccccccccccccchhhh-----cCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccccccccc
Q 003605 567 SRHISTRVMGTFGYVAPEYAM-----TGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLER 641 (808)
Q Consensus 567 ~~~~~~~~~Gt~~Y~APE~l~-----~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ 641 (808)
.......++..|++||++. ...++.++|||||||++|||++|+.||...... ..+..+. ..
T Consensus 158 --~~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~--~~~~~~~----~~------ 223 (280)
T cd06611 158 --QKRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM--RVLLKIL----KS------ 223 (280)
T ss_pred --cccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH--HHHHHHh----cC------
Confidence 1123346889999999875 344678999999999999999999998643211 1111111 00
Q ss_pred ccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 642 IIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 642 ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
..+.+ ..+......+.+++.+||+.+|++||++.+|++.
T Consensus 224 -~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 224 -EPPTL--DQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred -CCCCc--CCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 00011 1122334578899999999999999999999775
No 235
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=2.2e-36 Score=317.86 Aligned_cols=240 Identities=24% Similarity=0.447 Sum_probs=190.2
Q ss_pred eeeeecCcEEEEEEEeeC--------CCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEee
Q 003605 415 RILGEGGFGLVYSGVLDD--------GTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 415 ~~LG~G~fG~VYkg~l~d--------g~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
+.||+|+||.||+|.... ...+|+|.+........++|.+|+.+++.++|+||+++++++...+..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 369999999999998642 234888888765555567899999999999999999999999998999999999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCc--------ceeccccc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFT--------PKVSDFGL 558 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~--------vKL~DFGL 558 (808)
+++|+|.++++.. ...++|..+++++.|++.||+|||+.+ |+||||||+|||++.++. ++++|||+
T Consensus 81 ~~~g~L~~~l~~~---~~~~~~~~~~~~~~qi~~~l~~lH~~~---iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~ 154 (258)
T cd05078 81 VKFGSLDTYLKKN---KNLINISWKLEVAKQLAWALHFLEDKG---LTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGI 154 (258)
T ss_pred CCCCcHHHHHhcC---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCccceEEEecccccccCCCceEEeccccc
Confidence 9999999999642 236899999999999999999999988 999999999999987765 58999998
Q ss_pred ccccccccccccccccccccccccchhhhc-CCCccccceeeHHHHHHHHHhCC-CCCCCCCCCCcchhHHhhhhhcccc
Q 003605 559 ARSAMDEESRHISTRVMGTFGYVAPEYAMT-GHLLVKSDVYSYGVVILELLSGR-KPVDMTQPPGQENLVAWARPLLTSR 636 (808)
Q Consensus 559 a~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~kSDVwSfGvvLlELlTG~-~P~~~~~~~~~~~lv~w~~~~~~~~ 636 (808)
+...... ....++..|+|||++.+ ..++.++|||||||++|||++|. .|+...... ..... ...
T Consensus 155 ~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~---~~~~~----~~~- 220 (258)
T cd05078 155 SITVLPK------EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQ---KKLQF----YED- 220 (258)
T ss_pred ccccCCc------hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHH---HHHHH----HHc-
Confidence 8644321 22457889999999886 45789999999999999999985 555322111 00000 000
Q ss_pred cccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 003605 637 EGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALK 685 (808)
Q Consensus 637 ~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le 685 (808)
....+.....++.+++.+||+.+|++||+++++++.|+
T Consensus 221 -----------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 221 -----------RHQLPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred -----------cccCCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 01122233467899999999999999999999998873
No 236
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=9.8e-36 Score=311.48 Aligned_cols=246 Identities=31% Similarity=0.495 Sum_probs=198.0
Q ss_pred CCcceeeeeeecCcEEEEEEEeeCCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecC
Q 003605 409 GNFDASRILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIP 488 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~ 488 (808)
++|.+.+.||+|+||.||++.. +++.||+|.++.. ...+.+.+|+.++++++|+|++++++++.. +..++||||+.
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~--~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-~~~~~v~e~~~ 81 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCD--VTAQAFLEETAVMTKLHHKNLVRLLGVILH-NGLYIVMELMS 81 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCc--chHHHHHHHHHHHHhCCCCCcCeEEEEEcC-CCcEEEEECCC
Confidence 4578889999999999999975 5788999998643 234678999999999999999999999876 45799999999
Q ss_pred CCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccccc
Q 003605 489 NGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESR 568 (808)
Q Consensus 489 ~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~ 568 (808)
+++|.+++.... ...+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||+++.....
T Consensus 82 ~~~L~~~l~~~~--~~~~~~~~~~~~~~qi~~al~~lH~~~---~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~--- 153 (254)
T cd05083 82 KGNLVNFLRTRG--RALVSVIQLLQFSLDVAEGMEYLESKK---LVHRDLAARNILVSEDGVAKVSDFGLARVGSMG--- 153 (254)
T ss_pred CCCHHHHHHhcC--cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccccCcceEEEcCCCcEEECCCccceecccc---
Confidence 999999996432 235889999999999999999999988 999999999999999999999999998754221
Q ss_pred ccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCC
Q 003605 569 HISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSL 647 (808)
Q Consensus 569 ~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l 647 (808)
......+..|+|||++.++.++.++|||||||++|||++ |+.||...... .+.... ....
T Consensus 154 --~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~---~~~~~~--------------~~~~ 214 (254)
T cd05083 154 --VDNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK---EVKECV--------------EKGY 214 (254)
T ss_pred --CCCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH---HHHHHH--------------hCCC
Confidence 112234568999999998899999999999999999998 99998643211 111111 0011
Q ss_pred CCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 003605 648 GNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALK 685 (808)
Q Consensus 648 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le 685 (808)
....+......+.+++.+|++.+|++||++++|++.|+
T Consensus 215 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 252 (254)
T cd05083 215 RMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLE 252 (254)
T ss_pred CCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHc
Confidence 11122234567889999999999999999999999886
No 237
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=2e-35 Score=311.53 Aligned_cols=250 Identities=24% Similarity=0.365 Sum_probs=193.7
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc-----chhhHHHHHHHHHHhhcccccceeEEeeeeec--cce
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD-----QQGGREFLAEVEMLSRLHHRNLVKLIGICIEE--QAR 480 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~-----~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~--~~~ 480 (808)
.+|...+.||+|+||.||+|... ++..||+|+++... ....+.+.+|+.++++++|+||+++++++.+. +..
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 46888999999999999999864 68899999986321 22345788999999999999999999988653 567
Q ss_pred EEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccc
Q 003605 481 CLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLAR 560 (808)
Q Consensus 481 ~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~ 560 (808)
++++||+++++|.+++.. ...+++...+.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++
T Consensus 82 ~l~~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~LH~~~---i~H~~l~p~nil~~~~~~~~l~dfg~~~ 154 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKA----YGALTESVTRKYTRQILEGMSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASK 154 (266)
T ss_pred EEEEeCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCCCcc
Confidence 899999999999999853 235889999999999999999999887 9999999999999999999999999987
Q ss_pred ccccccc-cccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccccccc
Q 003605 561 SAMDEES-RHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGL 639 (808)
Q Consensus 561 ~~~~~~~-~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l 639 (808)
....... ........++..|+|||++.+..++.++|||||||++|||++|+.||...... .. ......
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~-----~~-~~~~~~----- 223 (266)
T cd06651 155 RLQTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAM-----AA-IFKIAT----- 223 (266)
T ss_pred ccccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchH-----HH-HHHHhc-----
Confidence 5432111 11112345788999999999888999999999999999999999999643210 00 000000
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 640 ERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 640 ~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
.... ...+......+..++ +|+..+|++||+++||++
T Consensus 224 -~~~~----~~~~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 224 -QPTN----PQLPSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred -CCCC----CCCchhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 0001 112222234555666 688899999999999975
No 238
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=9.7e-36 Score=317.32 Aligned_cols=256 Identities=25% Similarity=0.396 Sum_probs=204.7
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc-cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEee
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV-DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~-~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
++|++.+.||+|+||+||++... +++.||+|++... .....+++.+|+++++.++|+||+++++++...+..++||||
T Consensus 5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (284)
T cd06620 5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCMEF 84 (284)
T ss_pred HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEec
Confidence 46777889999999999999865 6889999988653 234467899999999999999999999999999999999999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCcEEeeeecccCeeecCCCcceecccccccccccc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHE-DSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDE 565 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~-~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~ 565 (808)
+++++|.++++. ...+++..+..++.+++.||.|||+ .+ ++||||||+||++++++.++|+|||++......
T Consensus 85 ~~~~~L~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~~~---i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~ 157 (284)
T cd06620 85 MDCGSLDRIYKK----GGPIPVEILGKIAVAVVEGLTYLYNVHR---IMHRDIKPSNILVNSRGQIKLCDFGVSGELINS 157 (284)
T ss_pred CCCCCHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHHHhcC---eeccCCCHHHEEECCCCcEEEccCCcccchhhh
Confidence 999999998853 2358999999999999999999997 45 999999999999999999999999998654221
Q ss_pred cccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCC-----cchhHHhhhhhcccccccc
Q 003605 566 ESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPG-----QENLVAWARPLLTSREGLE 640 (808)
Q Consensus 566 ~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~-----~~~lv~w~~~~~~~~~~l~ 640 (808)
......|+..|+|||++.+..++.++|||||||++|||+||+.||+...... ...+..+........
T Consensus 158 ----~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 229 (284)
T cd06620 158 ----IADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQEP---- 229 (284)
T ss_pred ----ccCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhcc----
Confidence 1123568999999999988899999999999999999999999997544321 111222222211100
Q ss_pred cccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 003605 641 RIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALK 685 (808)
Q Consensus 641 ~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le 685 (808)
.+.+ ...+....+.+++.+|++.||++||++.||+++..
T Consensus 230 ---~~~~---~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~~ 268 (284)
T cd06620 230 ---PPRL---PSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMPP 268 (284)
T ss_pred ---CCCC---CchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCcc
Confidence 0111 11123467899999999999999999999998753
No 239
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=1.6e-35 Score=308.16 Aligned_cols=251 Identities=31% Similarity=0.526 Sum_probs=200.5
Q ss_pred cceeeeeeecCcEEEEEEEeeC-----CCEEEEEEeecccch-hhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEE
Q 003605 411 FDASRILGEGGFGLVYSGVLDD-----GTKVAVKVLKRVDQQ-GGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVY 484 (808)
Q Consensus 411 f~~~~~LG~G~fG~VYkg~l~d-----g~~VAVK~lk~~~~~-~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~ 484 (808)
|.+.+.||+|+||.||++...+ +..||+|+++..... ..+.+.+|++++.+++|+||+++++++.+.+..+++|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 3456889999999999999763 378999999754433 5678999999999999999999999999999999999
Q ss_pred eecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccc
Q 003605 485 ELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMD 564 (808)
Q Consensus 485 Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~ 564 (808)
||+++++|.++++.... ..+++.+++.++.|++.||+|||+.+ ++||||||+||++++++.++|+|||+++....
T Consensus 81 e~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~ql~~~l~~lh~~~---~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 155 (258)
T smart00219 81 EYMEGGDLLDYLRKNRP--KELSLSDLLSFALQIARGMEYLESKN---FIHRDLAARNCLVGENLVVKISDFGLSRDLYD 155 (258)
T ss_pred eccCCCCHHHHHHhhhh--ccCCHHHHHHHHHHHHHHHHHHhcCC---eeecccccceEEEccCCeEEEcccCCceeccc
Confidence 99999999999964221 12899999999999999999999998 99999999999999999999999999976543
Q ss_pred ccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhccccccccccc
Q 003605 565 EESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLERII 643 (808)
Q Consensus 565 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~iv 643 (808)
..... .....++..|+|||.+.+..++.++||||||++++||++ |+.||.... ...+...... ..
T Consensus 156 ~~~~~-~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~---~~~~~~~~~~----~~------ 221 (258)
T smart00219 156 DDYYK-KKGGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMS---NEEVLEYLKK----GY------ 221 (258)
T ss_pred ccccc-cccCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC---HHHHHHHHhc----CC------
Confidence 32211 112336789999999988889999999999999999999 788876421 1122221110 00
Q ss_pred CCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 003605 644 DPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQAL 684 (808)
Q Consensus 644 D~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~L 684 (808)
....+......+.+++.+|+..+|++||++.|+++.|
T Consensus 222 ----~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 222 ----RLPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred ----CCCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 0111122456789999999999999999999998764
No 240
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=1.1e-35 Score=312.10 Aligned_cols=256 Identities=31% Similarity=0.494 Sum_probs=202.1
Q ss_pred HHhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccchhhHHHHHHHHHHhhc-ccccceeEEeeeeecc-----
Q 003605 406 KATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQQGGREFLAEVEMLSRL-HHRNLVKLIGICIEEQ----- 478 (808)
Q Consensus 406 ~at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~~~~~~----- 478 (808)
..+++|++.+.||+|+||.||+|... +++.+++|++.... ...++|.+|+++++++ +|+||+++++++....
T Consensus 3 ~~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (275)
T cd06608 3 DPTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIE-DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGND 81 (275)
T ss_pred CchhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCc-hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcc
Confidence 35789999999999999999999975 67899999987543 3456899999999999 6999999999997644
Q ss_pred -ceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccc
Q 003605 479 -ARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFG 557 (808)
Q Consensus 479 -~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFG 557 (808)
..++||||+++++|.++++........+++..++.++.|++.||+|||+.+ ++|+||+|+||++++++.+||+|||
T Consensus 82 ~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~~l~p~ni~~~~~~~~~l~d~~ 158 (275)
T cd06608 82 DQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENK---VIHRDIKGQNILLTKNAEVKLVDFG 158 (275)
T ss_pred eEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCC---cccCCCCHHHEEEccCCeEEECCCc
Confidence 479999999999999998754433457899999999999999999999988 9999999999999999999999999
Q ss_pred cccccccccccccccccccccccccchhhhc-----CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhh
Q 003605 558 LARSAMDEESRHISTRVMGTFGYVAPEYAMT-----GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPL 632 (808)
Q Consensus 558 La~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-----~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~ 632 (808)
++....... .......|+..|+|||++.. ..++.++|||||||+||||++|+.||..... ...+.....
T Consensus 159 ~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~-- 232 (275)
T cd06608 159 VSAQLDSTL--GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHP--MRALFKIPR-- 232 (275)
T ss_pred cceecccch--hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccch--HHHHHHhhc--
Confidence 987543221 11223458889999998753 3467899999999999999999999963221 111111100
Q ss_pred cccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 633 LTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 633 ~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
. ..+.+ ..+......+.+++.+||..||++||++.||++
T Consensus 233 ----~-----~~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 233 ----N-----PPPTL--KSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred ----c-----CCCCC--CchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 0 00011 112234567899999999999999999999976
No 241
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=1.6e-35 Score=314.56 Aligned_cols=260 Identities=27% Similarity=0.403 Sum_probs=204.1
Q ss_pred CCHHHHHHHhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccchhhHHHHHHHHHHhhc-ccccceeEEeeeee
Q 003605 399 FSASEIEKATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQQGGREFLAEVEMLSRL-HHRNLVKLIGICIE 476 (808)
Q Consensus 399 fs~~el~~at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~~~~ 476 (808)
.++.++....+.|++.+.||+|+||.||+|... +++.+|+|.+... .....++..|+.++.++ +|+||+++++++..
T Consensus 6 ~~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~-~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 84 (282)
T cd06636 6 IDLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVT-EDEEEEIKLEINMLKKYSHHRNIATYYGAFIK 84 (282)
T ss_pred hhhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecC-hHHHHHHHHHHHHHHHhcCCCcEEEEeeehhc
Confidence 467777778899999999999999999999974 6889999998653 23446788999999998 69999999999853
Q ss_pred ------ccceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCc
Q 003605 477 ------EQARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFT 550 (808)
Q Consensus 477 ------~~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~ 550 (808)
.+..+++|||+++|+|.+++.... ...+++..++.++.|++.||+|||+.+ |+|+||||+||++++++.
T Consensus 85 ~~~~~~~~~~~iv~e~~~~~~L~~~~~~~~--~~~~~~~~~~~~~~qi~~al~~LH~~~---ivH~dl~~~nili~~~~~ 159 (282)
T cd06636 85 KSPPGHDDQLWLVMEFCGAGSVTDLVKNTK--GNALKEDWIAYICREILRGLAHLHAHK---VIHRDIKGQNVLLTENAE 159 (282)
T ss_pred ccccCCCCEEEEEEEeCCCCcHHHHHHHcc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCC
Confidence 356799999999999999986422 235888899999999999999999988 999999999999999999
Q ss_pred ceecccccccccccccccccccccccccccccchhhh-----cCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchh
Q 003605 551 PKVSDFGLARSAMDEESRHISTRVMGTFGYVAPEYAM-----TGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENL 625 (808)
Q Consensus 551 vKL~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~-----~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~l 625 (808)
++|+|||+++...... .......|+..|+|||.+. ...++.++|||||||++|||++|+.||...........
T Consensus 160 ~~l~dfg~~~~~~~~~--~~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~~ 237 (282)
T cd06636 160 VKLVDFGVSAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALFL 237 (282)
T ss_pred EEEeeCcchhhhhccc--cCCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhhh
Confidence 9999999987543211 1122356889999999875 34678899999999999999999999964321110000
Q ss_pred HHhhhhhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 626 VAWARPLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 626 v~w~~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
......+.+ ........+.+++.+||+.||++||++.|+++
T Consensus 238 -------------~~~~~~~~~---~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 238 -------------IPRNPPPKL---KSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred -------------HhhCCCCCC---cccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 000000111 11123467999999999999999999999875
No 242
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=1.3e-35 Score=315.13 Aligned_cols=266 Identities=26% Similarity=0.347 Sum_probs=201.8
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc--cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEe
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV--DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYE 485 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~--~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~E 485 (808)
++|+..+.||+|+||.||+|... +++.||||+++.. .....+.+.+|++++++++|+||+++++++...+..++|||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 47889999999999999999976 6789999998743 23345789999999999999999999999999999999999
Q ss_pred ecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccc
Q 003605 486 LIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDE 565 (808)
Q Consensus 486 y~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~ 565 (808)
|++++.|..++. ....+++.+++.++.+++.||+|||+.+ ++|+||+++||++++++.+||+|||++......
T Consensus 81 ~~~~~~l~~~~~----~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~ 153 (288)
T cd07833 81 YVERTLLELLEA----SPGGLPPDAVRSYIWQLLQAIAYCHSHN---IIHRDIKPENILVSESGVLKLCDFGFARALRAR 153 (288)
T ss_pred cCCCCHHHHHHh----cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEEeeecccccCCC
Confidence 999877766553 2345899999999999999999999988 999999999999999999999999998765433
Q ss_pred cccccccccccccccccchhhhcC-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcch-hHHhhhhh-------cccc
Q 003605 566 ESRHISTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQEN-LVAWARPL-------LTSR 636 (808)
Q Consensus 566 ~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~-lv~w~~~~-------~~~~ 636 (808)
.. .......++..|+|||++.+. .++.++||||||+++|||++|+.||......+... +..+.... ....
T Consensus 154 ~~-~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (288)
T cd07833 154 PA-SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYLIQKCLGPLPPSHQELFSSN 232 (288)
T ss_pred cc-ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHhhhcccC
Confidence 22 122345678899999999888 88999999999999999999999986432211000 00000000 0000
Q ss_pred ccc-----ccccCCC-CCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 637 EGL-----ERIIDPS-LGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 637 ~~l-----~~ivD~~-l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
... ....+.. +...++.....++.+++.+||..+|++||++++|++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 233 PRFAGVAFPEPSQPESLERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred ccccccccCCCCCcHHHHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 000 0000000 000112223578999999999999999999999875
No 243
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=1.8e-35 Score=355.50 Aligned_cols=264 Identities=24% Similarity=0.311 Sum_probs=206.6
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc---cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEE
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV---DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVY 484 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~---~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~ 484 (808)
++|++.++||+|+||.||+|... +|+.||||+++.. .....++|.+|++++++++|+||+++++++.+.+..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 57999999999999999999865 6899999999742 2234567999999999999999999999999999999999
Q ss_pred eecCCCCcccccccccc-------CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccc
Q 003605 485 ELIPNGSVESHLHGVDK-------ESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFG 557 (808)
Q Consensus 485 Ey~~~GsL~~~L~~~~~-------~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFG 557 (808)
||+++|+|.++++.... ....+++.++++|+.|+++||+|||+.+ |+||||||+|||++.++++||+|||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~G---IIHRDLKPeNILLd~dg~vKLiDFG 158 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKG---VLHRDLKPDNILLGLFGEVVILDWG 158 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchheEEEcCCCCEEEEecC
Confidence 99999999999864211 1234678889999999999999999988 9999999999999999999999999
Q ss_pred cccccccccc----------------cccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCC
Q 003605 558 LARSAMDEES----------------RHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPG 621 (808)
Q Consensus 558 La~~~~~~~~----------------~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~ 621 (808)
+++....... ........||+.|+|||++.+..++.++|||||||++|||+||+.||......
T Consensus 159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~- 237 (932)
T PRK13184 159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGR- 237 (932)
T ss_pred cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchh-
Confidence 9976521110 01112356999999999999999999999999999999999999999642211
Q ss_pred cchhHHhhhhhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCC-CHHHHHHHHHHHHHh
Q 003605 622 QENLVAWARPLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRP-FMGEVVQALKLVCNE 690 (808)
Q Consensus 622 ~~~lv~w~~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RP-sm~eVl~~Le~i~~~ 690 (808)
... +.. .+.++.-.. ...+....+.+++.+|++.||++|+ ++.++++.|+...+.
T Consensus 238 --ki~-~~~----------~i~~P~~~~-p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~ 293 (932)
T PRK13184 238 --KIS-YRD----------VILSPIEVA-PYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQG 293 (932)
T ss_pred --hhh-hhh----------hccChhhcc-ccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 000 000 001110000 0112335688999999999999995 677788888876653
No 244
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=2.3e-35 Score=311.46 Aligned_cols=255 Identities=26% Similarity=0.416 Sum_probs=198.7
Q ss_pred CcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc----------chhhHHHHHHHHHHhhcccccceeEEeeeeecc
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD----------QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQ 478 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~----------~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~ 478 (808)
+|...+.||+|+||.||+|... +|+.||+|.++... ....+.+.+|++++++++|+|++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 4677889999999999999864 68999999885311 112346888999999999999999999999999
Q ss_pred ceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccc
Q 003605 479 ARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGL 558 (808)
Q Consensus 479 ~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGL 558 (808)
..++||||+++++|.++++.. ..+++..+..++.|++.||.|||+.+ ++||||+++||+++.++.++|+|||+
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~----~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~~~nil~~~~~~~~l~d~~~ 154 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTY----GRFEEQLVRFFTEQVLEGLAYLHSKG---ILHRDLKADNLLVDADGICKISDFGI 154 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhc----cCCCHHHHHHHHHHHHHHHHHHhhCC---eeecCCChhhEEEcCCCeEEEeeccc
Confidence 999999999999999999642 46899999999999999999999987 99999999999999999999999999
Q ss_pred ccccccccccccccccccccccccchhhhcCC--CccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccc
Q 003605 559 ARSAMDEESRHISTRVMGTFGYVAPEYAMTGH--LLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSR 636 (808)
Q Consensus 559 a~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~--~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~ 636 (808)
++...............++..|+|||.+.... ++.++||||||+++|||++|..||..... ...+.. ...
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~-----~~~~~~-~~~-- 226 (272)
T cd06629 155 SKKSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEA-----IAAMFK-LGN-- 226 (272)
T ss_pred cccccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcch-----HHHHHH-hhc--
Confidence 97643221111223356888999999987654 78999999999999999999999853221 111110 000
Q ss_pred cccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 637 EGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 637 ~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
......++.. ...+....+.+++.+|+..+|++||++.+|++.
T Consensus 227 ~~~~~~~~~~----~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 269 (272)
T cd06629 227 KRSAPPIPPD----VSMNLSPVALDFLNACFTINPDNRPTARELLQH 269 (272)
T ss_pred cccCCcCCcc----ccccCCHHHHHHHHHHhcCChhhCCCHHHHhhC
Confidence 0001111111 112234678999999999999999999999763
No 245
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=3.1e-35 Score=307.26 Aligned_cols=250 Identities=22% Similarity=0.317 Sum_probs=202.7
Q ss_pred CcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc--cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEee
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV--DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~--~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
+|+..+.||+|+||.+|++... +|+.||+|++... .....+++.+|++++++++|+||+++++++.+.+..++|+||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 5788999999999999999865 7899999998742 334456899999999999999999999999999999999999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEE 566 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~ 566 (808)
+.+++|.++++.. ....+++.++++++.|++.||+|||+.+ ++|+||+|+|||++.++.++|+|||++.......
T Consensus 81 ~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~ 155 (256)
T cd08218 81 CEGGDLYKKINAQ--RGVLFPEDQILDWFVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTV 155 (256)
T ss_pred CCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEEeeccceeecCcch
Confidence 9999999988632 2235789999999999999999999988 9999999999999999999999999997653321
Q ss_pred ccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCC
Q 003605 567 SRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPS 646 (808)
Q Consensus 567 ~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~ 646 (808)
. ......|+..|+|||++.++.++.++|||||||+++||++|+.||..... .......... .
T Consensus 156 ~--~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~------~~~~~~~~~~----------~ 217 (256)
T cd08218 156 E--LARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNM------KNLVLKIIRG----------S 217 (256)
T ss_pred h--hhhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCH------HHHHHHHhcC----------C
Confidence 1 11234578899999999998999999999999999999999999864221 1111111110 0
Q ss_pred CCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 647 LGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 647 l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
....+......+.+++.+|++.+|++||++.||++.
T Consensus 218 -~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~~ 253 (256)
T cd08218 218 -YPPVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILEK 253 (256)
T ss_pred -CCCCcccCCHHHHHHHHHHhhCChhhCcCHHHHhhC
Confidence 011222345678999999999999999999999863
No 246
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=4.7e-35 Score=306.58 Aligned_cols=257 Identities=26% Similarity=0.392 Sum_probs=205.4
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc-chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEee
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD-QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~-~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
++|++.+.||.|+||+||+|... ++..+|+|++.... ....+.+.+|+++++.++|+||+++++.+..++..++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 47889999999999999999964 67899999986432 33567899999999999999999999999999999999999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEE 566 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~ 566 (808)
+++++|.++++.... ...+++.....++.|++.||+|||+.+ ++||||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~ql~~al~~lh~~~---i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~ 156 (267)
T cd06610 81 LSGGSLLDIMKSSYP-RGGLDEAIIATVLKEVLKGLEYLHSNG---QIHRDIKAGNILLGEDGSVKIADFGVSASLADGG 156 (267)
T ss_pred cCCCcHHHHHHHhcc-cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHhEEEcCCCCEEEcccchHHHhccCc
Confidence 999999999964322 235899999999999999999999988 9999999999999999999999999987655432
Q ss_pred cc--ccccccccccccccchhhhcC-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccccccccccc
Q 003605 567 SR--HISTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERII 643 (808)
Q Consensus 567 ~~--~~~~~~~Gt~~Y~APE~l~~~-~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~iv 643 (808)
.. .......|+..|+|||++... .++.++|||||||++|||++|+.||...... ..+..+... .
T Consensus 157 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~--~~~~~~~~~-----------~ 223 (267)
T cd06610 157 DRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPM--KVLMLTLQN-----------D 223 (267)
T ss_pred cccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChh--hhHHHHhcC-----------C
Confidence 22 122344688999999998877 7899999999999999999999999643321 111111110 0
Q ss_pred CCCCCCCC-ChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 644 DPSLGNDV-PFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 644 D~~l~~~~-~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
.+.+.... .......+.+++.+|++.||++||++.||++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 224 PPSLETGADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred CCCcCCccccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 01111111 1133467899999999999999999999976
No 247
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=6.1e-35 Score=311.98 Aligned_cols=260 Identities=26% Similarity=0.354 Sum_probs=205.3
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc-chhhHHHHHHHHHHhhcccccceeEEeeeeec--cceEEEE
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD-QQGGREFLAEVEMLSRLHHRNLVKLIGICIEE--QARCLVY 484 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~-~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~--~~~~LV~ 484 (808)
++|+..+.||.|++|.||++... +++.+|+|.+.... .....++.+|++++++++|+||++++++|.+. +..++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 47889999999999999999975 68899999987532 34567899999999999999999999998654 4679999
Q ss_pred eecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccc
Q 003605 485 ELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMD 564 (808)
Q Consensus 485 Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~ 564 (808)
||+++++|.+++.........+++.....|+.|++.||+|||+.+ ++|+||+++||++++++.++|+|||++.....
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~ 157 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRK---IIHRDIKPSNILLTRKGQVKLCDFGVSGELVN 157 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEEecCCeEEEeeccccccccc
Confidence 999999999987644344456899999999999999999999988 99999999999999999999999999865432
Q ss_pred ccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCC--CcchhHHhhhhhcccccccccc
Q 003605 565 EESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPP--GQENLVAWARPLLTSREGLERI 642 (808)
Q Consensus 565 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~--~~~~lv~w~~~~~~~~~~l~~i 642 (808)
.. .....++..|+|||.+.+..++.++|||||||++|||++|+.||+..... ....+..|..... ...+
T Consensus 158 ~~----~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 228 (287)
T cd06621 158 SL----AGTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMP-----NPEL 228 (287)
T ss_pred cc----cccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCC-----chhh
Confidence 11 12345788999999999999999999999999999999999999755321 1122223321100 0001
Q ss_pred cCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 643 IDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 643 vD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
.+. . .........+.+++.+||+.+|++||++.||++.
T Consensus 229 ~~~-~--~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~~ 266 (287)
T cd06621 229 KDE-P--GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLEH 266 (287)
T ss_pred ccC-C--CCCCchHHHHHHHHHHHcCCCcccCCCHHHHHhC
Confidence 000 0 0012245678999999999999999999999874
No 248
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=3.8e-35 Score=308.89 Aligned_cols=251 Identities=23% Similarity=0.343 Sum_probs=196.3
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc-----chhhHHHHHHHHHHhhcccccceeEEeeeeec--cce
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD-----QQGGREFLAEVEMLSRLHHRNLVKLIGICIEE--QAR 480 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~-----~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~--~~~ 480 (808)
++|++.++||+|+||.||+|... +++.||||.++... ....+.+.+|+.++++++|+||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 57889999999999999999865 68999999886321 22346788999999999999999999988764 457
Q ss_pred EEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccc
Q 003605 481 CLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLAR 560 (808)
Q Consensus 481 ~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~ 560 (808)
+++|||+++++|.+++.. ...+++...++++.|++.||+|||+.+ ++|+||||+||+++.++.++|+|||+++
T Consensus 82 ~~v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~l~Dfg~~~ 154 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKS----YGALTENVTRKYTRQILEGVSYLHSNM---IVHRDIKGANILRDSVGNVKLGDFGASK 154 (265)
T ss_pred EEEEEecCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEecCCCCEEECcCcccc
Confidence 899999999999999852 235788999999999999999999988 9999999999999999999999999987
Q ss_pred cccccccc-ccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccccccc
Q 003605 561 SAMDEESR-HISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGL 639 (808)
Q Consensus 561 ~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l 639 (808)
........ .......++..|+|||.+.+..++.++|||||||++|||++|+.||..... .....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-----~~~~~---------- 219 (265)
T cd06652 155 RLQTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEA-----MAAIF---------- 219 (265)
T ss_pred ccccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccch-----HHHHH----------
Confidence 54321111 111234588899999999888899999999999999999999999863211 11100
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 640 ERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 640 ~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
+..........+......+.+++.+|+. +|++||+++||++.
T Consensus 220 -~~~~~~~~~~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~~ 261 (265)
T cd06652 220 -KIATQPTNPVLPPHVSDHCRDFLKRIFV-EAKLRPSADELLRH 261 (265)
T ss_pred -HHhcCCCCCCCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhcC
Confidence 0000001112233445678889999985 89999999999753
No 249
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=7.7e-36 Score=316.92 Aligned_cols=265 Identities=22% Similarity=0.341 Sum_probs=200.0
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc--chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEe
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD--QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYE 485 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~--~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~E 485 (808)
++|+..+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++|+||+++++++..++..++|+|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 46888999999999999999976 58999999986432 2235678899999999999999999999999999999999
Q ss_pred ecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccc
Q 003605 486 LIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDE 565 (808)
Q Consensus 486 y~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~ 565 (808)
|+++++|.++.+. ...++|.+++.++.|++.||+|||+.+ ++|+||+|+||++++++.++|+|||++......
T Consensus 81 ~~~~~~l~~~~~~----~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~ 153 (286)
T cd07846 81 FVDHTVLDDLEKY----PNGLDESRVRKYLFQILRGIEFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAP 153 (286)
T ss_pred cCCccHHHHHHhc----cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEECCCCcEEEEeeeeeeeccCC
Confidence 9999998887642 234899999999999999999999988 999999999999999999999999998765332
Q ss_pred cccccccccccccccccchhhhc-CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCc-chhHHhhhhhcccc-------
Q 003605 566 ESRHISTRVMGTFGYVAPEYAMT-GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQ-ENLVAWARPLLTSR------- 636 (808)
Q Consensus 566 ~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~-~~lv~w~~~~~~~~------- 636 (808)
. .......++..|+|||++.+ ..++.++|||||||++|||++|+.||........ ..+..+........
T Consensus 154 ~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (286)
T cd07846 154 G--EVYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIKCLGNLIPRHQEIFQKN 231 (286)
T ss_pred c--cccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHHHhCCCchhhHHHhccc
Confidence 2 22233457889999999875 4578899999999999999999988864321110 01111111110000
Q ss_pred cccccccCCCCCC-----CCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 637 EGLERIIDPSLGN-----DVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 637 ~~l~~ivD~~l~~-----~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
........+.... .........+.+++.+||+.+|++||++.+|++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 232 PLFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred hHhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 0000000000000 001123467999999999999999999999875
No 250
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=2.4e-35 Score=317.16 Aligned_cols=263 Identities=23% Similarity=0.303 Sum_probs=199.0
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc-chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEee
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD-QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~-~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
++|.+.+.||+|+||.||+|... +++.||+|.++... ......+.+|++++++++|+||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 57889999999999999999875 67899999987432 23345678999999999999999999999999999999999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEE 566 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~ 566 (808)
+. ++|.+++.. ....+++..++.++.|+++||+|||+.+ |+||||||+|||+++++.+||+|||+++......
T Consensus 86 ~~-~~l~~~l~~---~~~~~~~~~~~~~~~qi~~aL~~lH~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~ 158 (301)
T cd07873 86 LD-KDLKQYLDD---CGNSINMHNVKLFLFQLLRGLNYCHRRK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPT 158 (301)
T ss_pred cc-cCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCHHHEEECCCCcEEECcCcchhccCCCC
Confidence 96 689888863 2345889999999999999999999988 9999999999999999999999999987543221
Q ss_pred ccccccccccccccccchhhhcC-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhc-----------c
Q 003605 567 SRHISTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLL-----------T 634 (808)
Q Consensus 567 ~~~~~~~~~Gt~~Y~APE~l~~~-~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~-----------~ 634 (808)
.......++..|+|||.+.+. .++.++|||||||++|||+||+.||...... .........+ .
T Consensus 159 --~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 233 (301)
T cd07873 159 --KTYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVE---EQLHFIFRILGTPTEETWPGIL 233 (301)
T ss_pred --CcccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHHHHHcCCCChhhchhhh
Confidence 111234568899999988654 5788999999999999999999999754321 1111111000 0
Q ss_pred cccccccccCCCCCCC----CChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 635 SREGLERIIDPSLGND----VPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 635 ~~~~l~~ivD~~l~~~----~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
..+.....-.+....+ ........+.+++.+|++.||++|||+.|+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~h 286 (301)
T cd07873 234 SNEEFKSYNYPKYRADCLHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMKH 286 (301)
T ss_pred ccccccccccCccccccHHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhcC
Confidence 0000000000111000 111234568899999999999999999999863
No 251
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=1.9e-35 Score=327.51 Aligned_cols=262 Identities=23% Similarity=0.305 Sum_probs=197.6
Q ss_pred HhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc--cchhhHHHHHHHHHHhhcccccceeEEeeeeec------
Q 003605 407 ATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV--DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEE------ 477 (808)
Q Consensus 407 at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~--~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~------ 477 (808)
..++|.+.+.||+|+||.||++... .++.||||+++.. .....+++.+|+.+++.++|+||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 4578999999999999999999865 6889999999742 334456788999999999999999999987543
Q ss_pred cceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccc
Q 003605 478 QARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFG 557 (808)
Q Consensus 478 ~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFG 557 (808)
...++||||+. ++|.+++. ..+++..+..++.|+++||+|||+++ |+||||||+|||++.++.+||+|||
T Consensus 102 ~~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~~~~qi~~aL~~LH~~~---ivH~Dlkp~NIll~~~~~~kL~DfG 171 (364)
T cd07875 102 QDVYIVMELMD-ANLCQVIQ------MELDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 171 (364)
T ss_pred CeEEEEEeCCC-CCHHHHHH------hcCCHHHHHHHHHHHHHHHHHHhhCC---eecCCCCHHHEEECCCCcEEEEeCC
Confidence 34699999996 47777663 24788999999999999999999988 9999999999999999999999999
Q ss_pred cccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhh-------
Q 003605 558 LARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWAR------- 630 (808)
Q Consensus 558 La~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~------- 630 (808)
+++..... .......||..|+|||++.+..++.++|||||||+||||++|+.||........ +.....
T Consensus 172 ~a~~~~~~---~~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~--~~~~~~~~~~~~~ 246 (364)
T cd07875 172 LARTAGTS---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ--WNKVIEQLGTPCP 246 (364)
T ss_pred CccccCCC---CcccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHHHH--HHHHHHhcCCCCH
Confidence 99754321 122334689999999999999999999999999999999999999965432110 000000
Q ss_pred -----------hhcccccc-----cccccCCCC---CCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 631 -----------PLLTSREG-----LERIIDPSL---GNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 631 -----------~~~~~~~~-----l~~ivD~~l---~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
........ ...+....+ ...........+.+++.+|++.||++|||+.|+++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 247 EFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred HHHHhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 00000000 000000000 001111234578899999999999999999999774
No 252
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2e-36 Score=323.26 Aligned_cols=248 Identities=22% Similarity=0.354 Sum_probs=208.3
Q ss_pred hCCcceeeeeeecCcEEEEEEEe-eCCCEEEEEEeecc---cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEE
Q 003605 408 TGNFDASRILGEGGFGLVYSGVL-DDGTKVAVKVLKRV---DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLV 483 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l-~dg~~VAVK~lk~~---~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV 483 (808)
..+|++.+.||+|.||+|-+|.. ..|+.||||.+++. +++..-.+.+||+||+.|+||||+.++.+|.+.+...+|
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 45788889999999999999985 58999999999753 455666789999999999999999999999999999999
Q ss_pred EeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccc
Q 003605 484 YELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAM 563 (808)
Q Consensus 484 ~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~ 563 (808)
|||..+|.|+||+. ....|++.+...++.||..|+.|+|.++ ++|||||.+|||||.|+++||+||||+-.+.
T Consensus 132 MEYaS~GeLYDYiS----er~~LsErEaRhfFRQIvSAVhYCHknr---VvHRDLKLENILLD~N~NiKIADFGLSNly~ 204 (668)
T KOG0611|consen 132 MEYASGGELYDYIS----ERGSLSEREARHFFRQIVSAVHYCHKNR---VVHRDLKLENILLDQNNNIKIADFGLSNLYA 204 (668)
T ss_pred EEecCCccHHHHHH----HhccccHHHHHHHHHHHHHHHHHHhhcc---ceecccchhheeecCCCCeeeeccchhhhhc
Confidence 99999999999995 4457999999999999999999999998 9999999999999999999999999998764
Q ss_pred cccccccccccccccccccchhhhcCCC-ccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccc
Q 003605 564 DEESRHISTRVMGTFGYVAPEYAMTGHL-LVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERI 642 (808)
Q Consensus 564 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~-s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~i 642 (808)
+. ..-+..+|++-|.+||++.+..| ....|-|||||+||-|+.|..||+..+ ...++...
T Consensus 205 ~~---kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~D---hk~lvrQI------------- 265 (668)
T KOG0611|consen 205 DK---KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRD---HKRLVRQI------------- 265 (668)
T ss_pred cc---cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCch---HHHHHHHh-------------
Confidence 32 33456789999999999998888 478999999999999999999998643 22333221
Q ss_pred cCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 003605 643 IDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQAL 684 (808)
Q Consensus 643 vD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~L 684 (808)
-.-.+. ..+......-||+|||..||++|.|+.+|....
T Consensus 266 s~GaYr---EP~~PSdA~gLIRwmLmVNP~RRATieDiAsHW 304 (668)
T KOG0611|consen 266 SRGAYR---EPETPSDASGLIRWMLMVNPERRATIEDIASHW 304 (668)
T ss_pred hccccc---CCCCCchHHHHHHHHHhcCcccchhHHHHhhhh
Confidence 111111 112234566799999999999999999998765
No 253
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=3.3e-35 Score=320.67 Aligned_cols=264 Identities=19% Similarity=0.230 Sum_probs=194.6
Q ss_pred eeeeeeec--CcEEEEEEEee-CCCEEEEEEeecc--cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeec
Q 003605 413 ASRILGEG--GFGLVYSGVLD-DGTKVAVKVLKRV--DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELI 487 (808)
Q Consensus 413 ~~~~LG~G--~fG~VYkg~l~-dg~~VAVK~lk~~--~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~ 487 (808)
+.++||+| +||+||++... +|+.||||+++.. .....+.+.+|+++++.++|+||++++++|..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 35789999 78999999865 7899999999743 2333456778999999999999999999999999999999999
Q ss_pred CCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccc
Q 003605 488 PNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEES 567 (808)
Q Consensus 488 ~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~ 567 (808)
++|+|.+++.... ...+++..+++++.|++.||+|||+.+ |+||||||+|||++.++.++++||+.+........
T Consensus 82 ~~~~l~~~~~~~~--~~~l~~~~~~~i~~qi~~~L~~LH~~~---iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~ 156 (327)
T cd08227 82 AYGSAKDLICTHF--MDGMSELAIAYILQGVLKALDYIHHMG---YVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQ 156 (327)
T ss_pred CCCcHHHHHHhhc--cCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCChhhEEEecCCcEEEcccchhhccccccc
Confidence 9999999985322 235899999999999999999999988 99999999999999999999999987643322111
Q ss_pred c-----ccccccccccccccchhhhc--CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccc-----
Q 003605 568 R-----HISTRVMGTFGYVAPEYAMT--GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTS----- 635 (808)
Q Consensus 568 ~-----~~~~~~~Gt~~Y~APE~l~~--~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~----- 635 (808)
. .......++..|+|||++.+ ..++.++|||||||++|||++|+.||...... .............
T Consensus 157 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~ 234 (327)
T cd08227 157 RLRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPAT--QMLLEKLNGTVPCLLDTT 234 (327)
T ss_pred cccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchh--HHHHHHhcCCcccccccc
Confidence 0 01112346778999999876 45889999999999999999999999643211 1111100000000
Q ss_pred ---cccc-----ccccCC-----------------CCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 636 ---REGL-----ERIIDP-----------------SLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 636 ---~~~l-----~~ivD~-----------------~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
.+.+ ....+. .............+.+++.+||+.||++|||+.||++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~~ 307 (327)
T cd08227 235 TIPAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLNH 307 (327)
T ss_pred chhhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhcC
Confidence 0000 000000 00001112334578899999999999999999999874
No 254
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=4.1e-35 Score=311.41 Aligned_cols=247 Identities=23% Similarity=0.370 Sum_probs=202.3
Q ss_pred CcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc-chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeec
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD-QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELI 487 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~-~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~ 487 (808)
.|+..+.||+|+||.||+|... +++.||||.++... ......+.+|+++++++.|+||+++++++.+.+..++||||+
T Consensus 5 ~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (277)
T cd06640 5 LFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEYL 84 (277)
T ss_pred hhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEecC
Confidence 4666788999999999999975 68899999987432 345678999999999999999999999999999999999999
Q ss_pred CCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccc
Q 003605 488 PNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEES 567 (808)
Q Consensus 488 ~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~ 567 (808)
++|+|.++++. ..+++.+...++.|++.||+|||+.+ ++|+||+|+||+++.++.++|+|||++.......
T Consensus 85 ~~~~L~~~i~~-----~~l~~~~~~~~~~~l~~~l~~lh~~~---ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~- 155 (277)
T cd06640 85 GGGSALDLLRA-----GPFDEFQIATMLKEILKGLDYLHSEK---KIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQ- 155 (277)
T ss_pred CCCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---ccCcCCChhhEEEcCCCCEEEcccccceeccCCc-
Confidence 99999999852 35889999999999999999999987 9999999999999999999999999997653322
Q ss_pred cccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCC
Q 003605 568 RHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSL 647 (808)
Q Consensus 568 ~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l 647 (808)
.......++..|+|||++.+..++.++|||||||++|||+||+.||....... ... .+....
T Consensus 156 -~~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~---~~~--------------~~~~~~ 217 (277)
T cd06640 156 -IKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMR---VLF--------------LIPKNN 217 (277)
T ss_pred -cccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHh---Hhh--------------hhhcCC
Confidence 11223457889999999988889999999999999999999999986432210 000 000011
Q ss_pred CCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 648 GNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 648 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
...........+.+++.+||+.+|++||++.++++.
T Consensus 218 ~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 218 PPTLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred CCCCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 112233456788999999999999999999999876
No 255
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=4.9e-35 Score=316.80 Aligned_cols=199 Identities=24% Similarity=0.333 Sum_probs=160.6
Q ss_pred eeeeeecCcEEEEEEEee---CCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeee--ccceEEEEeecC
Q 003605 414 SRILGEGGFGLVYSGVLD---DGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIE--EQARCLVYELIP 488 (808)
Q Consensus 414 ~~~LG~G~fG~VYkg~l~---dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~--~~~~~LV~Ey~~ 488 (808)
.++||+|+||+||+|+.. +++.||+|.++... ....+.+|++++++++|+||+++++++.. +...++||||+.
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 368999999999999864 46789999987432 23567899999999999999999999854 356789999995
Q ss_pred CCCccccccccc-----cCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeee----cCCCcceecccccc
Q 003605 489 NGSVESHLHGVD-----KESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILL----EHDFTPKVSDFGLA 559 (808)
Q Consensus 489 ~GsL~~~L~~~~-----~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILL----d~~~~vKL~DFGLa 559 (808)
++|.+++.... .....+++..+..|+.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|||++
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~---ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07868 84 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEecCCCCcCcEEEeecCce
Confidence 58877764321 12235889999999999999999999998 9999999999999 45678999999999
Q ss_pred cccccccc-cccccccccccccccchhhhc-CCCccccceeeHHHHHHHHHhCCCCCCCCC
Q 003605 560 RSAMDEES-RHISTRVMGTFGYVAPEYAMT-GHLLVKSDVYSYGVVILELLSGRKPVDMTQ 618 (808)
Q Consensus 560 ~~~~~~~~-~~~~~~~~Gt~~Y~APE~l~~-~~~s~kSDVwSfGvvLlELlTG~~P~~~~~ 618 (808)
+....... ........||..|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~ 220 (317)
T cd07868 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQ 220 (317)
T ss_pred eccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCc
Confidence 86533211 111234568999999999876 458999999999999999999999996543
No 256
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.3e-36 Score=338.37 Aligned_cols=250 Identities=29% Similarity=0.442 Sum_probs=207.7
Q ss_pred eeeeeeecCcEEEEEEEee--CCC--EEEEEEeecccch-hhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeec
Q 003605 413 ASRILGEGGFGLVYSGVLD--DGT--KVAVKVLKRVDQQ-GGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELI 487 (808)
Q Consensus 413 ~~~~LG~G~fG~VYkg~l~--dg~--~VAVK~lk~~~~~-~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~ 487 (808)
+.++||+|.||.|++|.+. +|+ .||||.++..... ...+|++|+.+|.+|+|+|+++|||+..+ ....||+|++
T Consensus 114 l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ELa 192 (1039)
T KOG0199|consen 114 LYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVFELA 192 (1039)
T ss_pred HHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHhhhc
Confidence 4578999999999999976 454 4799999865443 67899999999999999999999999987 6779999999
Q ss_pred CCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccc
Q 003605 488 PNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEES 567 (808)
Q Consensus 488 ~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~ 567 (808)
+.|+|.+.|++ ..+..|-......++.|||.||.||..++ +|||||..+|+||-....+||+||||.+.+...+.
T Consensus 193 plGSLldrLrk--a~~~~llv~~Lcdya~QiA~aM~YLeskr---lvHRDLAARNlllasprtVKI~DFGLmRaLg~ned 267 (1039)
T KOG0199|consen 193 PLGSLLDRLRK--AKKAILLVSRLCDYAMQIAKAMQYLESKR---LVHRDLAARNLLLASPRTVKICDFGLMRALGENED 267 (1039)
T ss_pred ccchHHHHHhh--ccccceeHHHHHHHHHHHHHHHHHHhhhh---hhhhhhhhhhheecccceeeeecccceeccCCCCc
Confidence 99999999986 33456777888999999999999999888 99999999999999999999999999998765444
Q ss_pred ccc-ccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhcccccccccccCC
Q 003605 568 RHI-STRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDP 645 (808)
Q Consensus 568 ~~~-~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~ 645 (808)
.+. .....-.+.|+|||.+..+.|+.+||||+|||.||||+| |..||-.... -.+-+.+|.
T Consensus 268 ~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g-----------------~qIL~~iD~ 330 (1039)
T KOG0199|consen 268 MYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRG-----------------IQILKNIDA 330 (1039)
T ss_pred ceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCH-----------------HHHHHhccc
Confidence 332 223345678999999999999999999999999999999 8888854221 111223343
Q ss_pred CCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 003605 646 SLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALK 685 (808)
Q Consensus 646 ~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le 685 (808)
.-+-.-+..+.++++++++.||..+|++||++..|.+.+-
T Consensus 331 ~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~ 370 (1039)
T KOG0199|consen 331 GERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLV 370 (1039)
T ss_pred cccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHH
Confidence 3333456788999999999999999999999999986553
No 257
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=7.3e-35 Score=304.59 Aligned_cols=252 Identities=25% Similarity=0.379 Sum_probs=207.4
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccc-hhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEee
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQ-QGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~-~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
++|++.+.||+|++|.||+++.. +++.|+||++..... ...+++.+|++++.+++|+||+++++++...+..++|+||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 46888999999999999999976 589999999876443 4567899999999999999999999999999999999999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCcEEeeeecccCeeecCCCcceecccccccccccc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHE-DSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDE 565 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~-~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~ 565 (808)
+++++|.+++... ..+++..+++++.|+++||+|||+ .+ ++||||+|+||+++.++.++|+|||++......
T Consensus 81 ~~~~~L~~~l~~~----~~l~~~~~~~~~~~l~~~l~~lh~~~~---~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~ 153 (264)
T cd06623 81 MDGGSLADLLKKV----GKIPEPVLAYIARQILKGLDYLHTKRH---IIHRDIKPSNLLINSKGEVKIADFGISKVLENT 153 (264)
T ss_pred cCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHhccCC---CccCCCCHHHEEECCCCCEEEccCccceecccC
Confidence 9999999999632 468999999999999999999999 87 999999999999999999999999998765332
Q ss_pred cccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCC
Q 003605 566 ESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDP 645 (808)
Q Consensus 566 ~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~ 645 (808)
.. ......++..|+|||.+.+..++.++||||||+++|||+||+.||..........+..+.. ..
T Consensus 154 ~~--~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~-------------~~ 218 (264)
T cd06623 154 LD--QCNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAIC-------------DG 218 (264)
T ss_pred CC--cccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHh-------------cC
Confidence 21 1124467889999999999999999999999999999999999997554312222222211 00
Q ss_pred CCCCCCChh-hHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 646 SLGNDVPFD-SVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 646 ~l~~~~~~~-~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
. ....+.. ....+.+++.+|+..+|++||++.|+++.
T Consensus 219 ~-~~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 219 P-PPSLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred C-CCCCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 0 0111222 45789999999999999999999999874
No 258
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=5.1e-35 Score=304.83 Aligned_cols=249 Identities=22% Similarity=0.350 Sum_probs=201.1
Q ss_pred CcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc--cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEee
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV--DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~--~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
+|+..+.||+|+||.||++... +++.+|||++... .....+++.+|++++++++|+||+++++.+..++..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 5888999999999999999864 6889999998643 344567899999999999999999999999988999999999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCC-Ccceecccccccccccc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHD-FTPKVSDFGLARSAMDE 565 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~-~~vKL~DFGLa~~~~~~ 565 (808)
+++++|.++++.. ....+++..+++++.++++||+|||+++ ++|+||||+||+++++ +.+||+|||++......
T Consensus 81 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (256)
T cd08220 81 APGGTLAEYIQKR--CNSLLDEDTILHFFVQILLALHHVHTKL---ILHRDLKTQNILLDKHKMVVKIGDFGISKILSSK 155 (256)
T ss_pred CCCCCHHHHHHHh--cccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEccCCCceecCCC
Confidence 9999999999642 2345899999999999999999999988 9999999999999865 46899999999765332
Q ss_pred cccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCC
Q 003605 566 ESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDP 645 (808)
Q Consensus 566 ~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~ 645 (808)
. ......++..|+|||.+.+..++.++||||||+++|+|++|+.||+.... .....+. .. ..
T Consensus 156 ~---~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~---~~~~~~~---~~--~~------- 217 (256)
T cd08220 156 S---KAYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANL---PALVLKI---MS--GT------- 217 (256)
T ss_pred c---cccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCch---HHHHHHH---Hh--cC-------
Confidence 1 12234678899999999988899999999999999999999999864322 1111111 10 00
Q ss_pred CCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 646 SLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 646 ~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
....+......+.+++.+||+.+|++||++.|+++.
T Consensus 218 --~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~~ 253 (256)
T cd08220 218 --FAPISDRYSPDLRQLILSMLNLDPSKRPQLSQIMAQ 253 (256)
T ss_pred --CCCCCCCcCHHHHHHHHHHccCChhhCCCHHHHhhC
Confidence 011122344678999999999999999999999763
No 259
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.1e-36 Score=320.08 Aligned_cols=261 Identities=25% Similarity=0.325 Sum_probs=198.3
Q ss_pred CcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeecc-----ceEEE
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQ-----ARCLV 483 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~-----~~~LV 483 (808)
.|...+++|.|+||.||+|++. +++.||||+.....+ .-.+|+++|+++.|||||+|+-+|.... ...||
T Consensus 25 ~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~lnlV 100 (364)
T KOG0658|consen 25 SYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLNLV 100 (364)
T ss_pred EEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHHHH
Confidence 4667899999999999999975 678999999864332 2236899999999999999999986432 34689
Q ss_pred EeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCC-Ccceeccccccccc
Q 003605 484 YELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHD-FTPKVSDFGLARSA 562 (808)
Q Consensus 484 ~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~-~~vKL~DFGLa~~~ 562 (808)
||||+. +|.++++.+...+..++.-.+.-+..|+.+||+|||+.+ |+||||||.|+|+|.+ +.+||||||.|+..
T Consensus 101 leymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~---IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L 176 (364)
T KOG0658|consen 101 LEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHG---ICHRDIKPQNLLVDPDTGVLKICDFGSAKVL 176 (364)
T ss_pred HHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcC---cccCCCChheEEEcCCCCeEEeccCCcceee
Confidence 999986 999999866555667887888889999999999999988 9999999999999976 99999999999987
Q ss_pred ccccccccccccccccccccchhhhcC-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccc-cc---
Q 003605 563 MDEESRHISTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTS-RE--- 637 (808)
Q Consensus 563 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~-~~--- 637 (808)
...... .....|..|+|||.+.+. .|+.+.||||.|||+.||+-|+.-|...... .+++..+.-+-.. ++
T Consensus 177 ~~~epn---iSYicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~--dQL~eIik~lG~Pt~e~I~ 251 (364)
T KOG0658|consen 177 VKGEPN---ISYICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSV--DQLVEIIKVLGTPTREDIK 251 (364)
T ss_pred ccCCCc---eeEEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHH--HHHHHHHHHhCCCCHHHHh
Confidence 654332 223457889999998864 7899999999999999999999988654332 2222222111100 00
Q ss_pred ---------ccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 638 ---------GLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 638 ---------~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
...++....+..-+......+.++++.++++.+|.+|.+..|++..
T Consensus 252 ~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~h 306 (364)
T KOG0658|consen 252 SMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALAH 306 (364)
T ss_pred hcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhcc
Confidence 0111111111111233455788999999999999999999999764
No 260
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=3.1e-35 Score=312.35 Aligned_cols=262 Identities=21% Similarity=0.290 Sum_probs=195.7
Q ss_pred CcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc--cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEee
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV--DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~--~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
+|+..+.||+|+||.||+|+.. +|+.||+|+++.. .......+.+|++++++++|+||+++++++.+.+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 4788899999999999999975 7899999998642 222345678899999999999999999999999999999999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEE 566 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~ 566 (808)
+. ++|.++++. ....+++..++.++.|+++||+|||+.+ |+||||||+||+++.++++||+|||+++......
T Consensus 81 ~~-~~l~~~~~~---~~~~~~~~~~~~~~~qi~~al~~LH~~~---i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~ 153 (284)
T cd07839 81 CD-QDLKKYFDS---CNGDIDPEIVKSFMFQLLKGLAFCHSHN---VLHRDLKPQNLLINKNGELKLADFGLARAFGIPV 153 (284)
T ss_pred CC-CCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEEcCCCcEEECccchhhccCCCC
Confidence 96 588887753 2345899999999999999999999988 9999999999999999999999999987543211
Q ss_pred ccccccccccccccccchhhhcCC-CccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccc--cc---ccc
Q 003605 567 SRHISTRVMGTFGYVAPEYAMTGH-LLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTS--RE---GLE 640 (808)
Q Consensus 567 ~~~~~~~~~Gt~~Y~APE~l~~~~-~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~--~~---~l~ 640 (808)
.......++..|+|||++.+.. ++.++|||||||++|||+||+.|+...... ............. .. ...
T Consensus 154 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 229 (284)
T cd07839 154 --RCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV--DDQLKRIFRLLGTPTEESWPGVS 229 (284)
T ss_pred --CCcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCH--HHHHHHHHHHhCCCChHHhHHhh
Confidence 1112345788999999987654 689999999999999999999986432211 1111100000000 00 000
Q ss_pred cccCCC----CC-----CCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 641 RIIDPS----LG-----NDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 641 ~ivD~~----l~-----~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
.+.+.. .. ..........+.+++.+||+.||++|||++|+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 230 KLPDYKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred hcccccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 000000 00 0011123467889999999999999999999975
No 261
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=7e-35 Score=305.15 Aligned_cols=252 Identities=27% Similarity=0.429 Sum_probs=201.0
Q ss_pred CcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccc--hhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEee
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQ--QGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~--~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
+|...+.||+|+||.||+|... +++.|++|.++.... ...+++.+|++++++++|+||+++++++...+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 5788899999999999999865 788999999975443 3667899999999999999999999999999999999999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEE 566 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~ 566 (808)
+++++|.++++. ...+++..++.|+.+++.||+|||+.+ |+|+||+++||++++++.+||+|||++.......
T Consensus 81 ~~~~~L~~~~~~----~~~~~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~ 153 (264)
T cd06626 81 CSGGTLEELLEH----GRILDEHVIRVYTLQLLEGLAYLHSHG---IVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNT 153 (264)
T ss_pred CCCCcHHHHHhh----cCCCChHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEcccccccccCCCC
Confidence 999999999863 235889999999999999999999988 9999999999999999999999999987654332
Q ss_pred cccc--ccccccccccccchhhhcCC---CccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccccccccc
Q 003605 567 SRHI--STRVMGTFGYVAPEYAMTGH---LLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLER 641 (808)
Q Consensus 567 ~~~~--~~~~~Gt~~Y~APE~l~~~~---~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ 641 (808)
.... .....++..|++||++.... ++.++||||||+++|||++|+.||...... ... .+. ... .
T Consensus 154 ~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~--~~~-~~~--~~~--~---- 222 (264)
T cd06626 154 TTMGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE--FQI-MFH--VGA--G---- 222 (264)
T ss_pred CcccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch--HHH-HHH--Hhc--C----
Confidence 2111 11345788999999998766 889999999999999999999999643211 111 110 000 0
Q ss_pred ccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 642 IIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 642 ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
..+.+.. .......+.+++.+||+.+|++||++.|++.
T Consensus 223 -~~~~~~~--~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 223 -HKPPIPD--SLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred -CCCCCCc--ccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0001100 1122466789999999999999999999864
No 262
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=9e-35 Score=300.84 Aligned_cols=251 Identities=27% Similarity=0.390 Sum_probs=205.2
Q ss_pred CcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc--chhhHHHHHHHHHHhhcccccceeEEeeeeec--cceEEEE
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD--QQGGREFLAEVEMLSRLHHRNLVKLIGICIEE--QARCLVY 484 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~--~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~--~~~~LV~ 484 (808)
+|...+.||+|++|.||+|... +++.|++|+++... ....+.+.+|++++++++|+||+++++.+.+. +..++++
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4778899999999999999976 78999999987543 24567899999999999999999999999988 8899999
Q ss_pred eecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccc
Q 003605 485 ELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMD 564 (808)
Q Consensus 485 Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~ 564 (808)
||+++++|.+++... ..++|.+++.++.++++||+|||+.+ ++|+||+|+||+++.++.++|+|||.+.....
T Consensus 81 e~~~~~~L~~~~~~~----~~~~~~~~~~~~~~l~~~l~~lh~~~---~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 153 (260)
T cd06606 81 EYVSGGSLSSLLKKF----GKLPEPVIRKYTRQILEGLAYLHSNG---IVHRDIKGANILVDSDGVVKLADFGCAKRLGD 153 (260)
T ss_pred EecCCCcHHHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCCHHHEEEcCCCCEEEcccccEEeccc
Confidence 999999999998632 27999999999999999999999987 99999999999999999999999999886544
Q ss_pred ccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccC
Q 003605 565 EESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIID 644 (808)
Q Consensus 565 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD 644 (808)
...........++..|++||.+.....+.++||||||+++++|++|+.||..... ....... +..
T Consensus 154 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~-----~~~~~~~----------~~~ 218 (260)
T cd06606 154 IETGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN-----PMAALYK----------IGS 218 (260)
T ss_pred ccccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc-----hHHHHHh----------ccc
Confidence 3221112345688899999999888899999999999999999999999975431 1111100 111
Q ss_pred CCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 645 PSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 645 ~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
.......+......+.+++.+|++.+|++||++.|+++
T Consensus 219 ~~~~~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 219 SGEPPEIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred cCCCcCCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 11111233334578999999999999999999999976
No 263
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=5.7e-35 Score=312.82 Aligned_cols=263 Identities=24% Similarity=0.285 Sum_probs=198.4
Q ss_pred CcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccc-----hhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEE
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQ-----QGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLV 483 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~-----~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV 483 (808)
+|+..+.||+|+||.||+|... +++.||||+++.... .....+..|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4778899999999999999965 689999999975332 2345677899999999999999999999998999999
Q ss_pred EeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccc
Q 003605 484 YELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAM 563 (808)
Q Consensus 484 ~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~ 563 (808)
|||+ +|+|.++++.. ...+++..+++++.|+++||+|||+++ |+|+||||+|||++.++.++|+|||+++...
T Consensus 81 ~e~~-~~~L~~~i~~~---~~~~~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nill~~~~~~~l~dfg~~~~~~ 153 (298)
T cd07841 81 FEFM-ETDLEKVIKDK---SIVLTPADIKSYMLMTLRGLEYLHSNW---ILHRDLKPNNLLIASDGVLKLADFGLARSFG 153 (298)
T ss_pred Eccc-CCCHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeecCCChhhEEEcCCCCEEEccceeeeecc
Confidence 9999 89999999632 236999999999999999999999998 9999999999999999999999999997654
Q ss_pred cccccccccccccccccccchhhhc-CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhc-------cc
Q 003605 564 DEESRHISTRVMGTFGYVAPEYAMT-GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLL-------TS 635 (808)
Q Consensus 564 ~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~-------~~ 635 (808)
.... ......++..|+|||.+.+ ..++.++|||||||++|||++|..+|...... ..+........ ..
T Consensus 154 ~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 229 (298)
T cd07841 154 SPNR--KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDI--DQLGKIFEALGTPTEENWPG 229 (298)
T ss_pred CCCc--cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccH--HHHHHHHHHcCCCchhhhhh
Confidence 3221 1123356788999998865 45789999999999999999997777543221 11100000000 00
Q ss_pred ccccccccCCCCCCC-----CChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 636 REGLERIIDPSLGND-----VPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 636 ~~~l~~ivD~~l~~~-----~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
...+........... ........+.+++.+||+.+|++||+++||++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~~ 282 (298)
T cd07841 230 VTSLPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALEH 282 (298)
T ss_pred cccccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 000000000000001 112335678999999999999999999999874
No 264
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=5.5e-35 Score=307.08 Aligned_cols=253 Identities=24% Similarity=0.402 Sum_probs=200.7
Q ss_pred CcceeeeeeecCcEEEEEEEe-eCCCEEEEEEeeccc------chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEE
Q 003605 410 NFDASRILGEGGFGLVYSGVL-DDGTKVAVKVLKRVD------QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCL 482 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l-~dg~~VAVK~lk~~~------~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~L 482 (808)
+|+..++||+|+||.||+|.. .+++.||+|.++... ....+++.+|++++++++|+||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 477789999999999999985 478999999986422 1234688999999999999999999999999999999
Q ss_pred EEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCC-cceecccccccc
Q 003605 483 VYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDF-TPKVSDFGLARS 561 (808)
Q Consensus 483 V~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~-~vKL~DFGLa~~ 561 (808)
|+||+++++|.+++.. ...+++..++.++.|++.||+|||+.+ ++|+||+|+||+++.++ .+||+|||++..
T Consensus 81 v~e~~~~~~L~~~l~~----~~~~~~~~~~~~~~ql~~al~~LH~~~---i~H~~i~~~nil~~~~~~~~~l~dfg~~~~ 153 (268)
T cd06630 81 FVEWMAGGSVSHLLSK----YGAFKEAVIINYTEQLLRGLSYLHENQ---IIHRDVKGANLLIDSTGQRLRIADFGAAAR 153 (268)
T ss_pred EEeccCCCcHHHHHHH----hCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEEcccccccc
Confidence 9999999999999853 236889999999999999999999998 99999999999998775 699999999876
Q ss_pred ccccccc--ccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccccccc
Q 003605 562 AMDEESR--HISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGL 639 (808)
Q Consensus 562 ~~~~~~~--~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l 639 (808)
....... .......++..|+|||++.+..++.++||||+|+++|||++|+.||......... .....
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~---~~~~~-------- 222 (268)
T cd06630 154 LAAKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSNHL---ALIFK-------- 222 (268)
T ss_pred cccccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcchH---HHHHH--------
Confidence 5432111 1112345788999999998888999999999999999999999998643221111 11100
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 640 ERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 640 ~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
+.........+......+.+++.+|++.+|++||++.|+++
T Consensus 223 --~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 223 --IASATTAPSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred --HhccCCCCCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 00001112233344567889999999999999999999975
No 265
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=4.3e-35 Score=316.53 Aligned_cols=198 Identities=23% Similarity=0.331 Sum_probs=160.0
Q ss_pred eeeeeecCcEEEEEEEee---CCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeee--ccceEEEEeecC
Q 003605 414 SRILGEGGFGLVYSGVLD---DGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIE--EQARCLVYELIP 488 (808)
Q Consensus 414 ~~~LG~G~fG~VYkg~l~---dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~--~~~~~LV~Ey~~ 488 (808)
..+||+|+||+||+|+.. ++..||+|.++... ....+.+|++++++++|+||+++++++.. +...++|+||+.
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 368999999999999965 35789999987532 23567899999999999999999999854 456799999996
Q ss_pred CCCccccccccc-----cCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeee----cCCCcceecccccc
Q 003605 489 NGSVESHLHGVD-----KESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILL----EHDFTPKVSDFGLA 559 (808)
Q Consensus 489 ~GsL~~~L~~~~-----~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILL----d~~~~vKL~DFGLa 559 (808)
++|.+++.... .....+++..++.++.|++.||+|||+.+ |+||||||+|||+ +.++.+||+|||++
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~---ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a 159 (317)
T cd07867 84 -HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFA 159 (317)
T ss_pred -CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCC---EEcCCCCHHHEEEccCCCCCCcEEEeeccce
Confidence 57777764221 12235889999999999999999999988 9999999999999 56679999999999
Q ss_pred ccccccccc-ccccccccccccccchhhhc-CCCccccceeeHHHHHHHHHhCCCCCCCC
Q 003605 560 RSAMDEESR-HISTRVMGTFGYVAPEYAMT-GHLLVKSDVYSYGVVILELLSGRKPVDMT 617 (808)
Q Consensus 560 ~~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~-~~~s~kSDVwSfGvvLlELlTG~~P~~~~ 617 (808)
+........ .......||..|+|||++.+ ..++.++|||||||++|||+||+.||...
T Consensus 160 ~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~ 219 (317)
T cd07867 160 RLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred eccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccc
Confidence 865432211 11233568999999999876 45789999999999999999999999643
No 266
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=6.2e-35 Score=315.87 Aligned_cols=251 Identities=25% Similarity=0.306 Sum_probs=199.2
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccc---hhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEE
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQ---QGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVY 484 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~---~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~ 484 (808)
++|+..+.||+|+||.||++... +++.||+|.+..... ...+.+.+|++++.+++|+||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 47889999999999999999976 589999999975322 24567899999999999999999999999999999999
Q ss_pred eecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccc
Q 003605 485 ELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMD 564 (808)
Q Consensus 485 Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~ 564 (808)
||+.+++|.++++.. ....+++..++.++.|++.||+|||+.+ ++|+||||+||+++.++.++|+|||++.....
T Consensus 81 e~~~~~~L~~~~~~~--~~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~ 155 (316)
T cd05574 81 DYCPGGELFRLLQRQ--PGKCLSEEVARFYAAEVLLALEYLHLLG---IVYRDLKPENILLHESGHIMLSDFDLSKQSDV 155 (316)
T ss_pred EecCCCCHHHHHHhC--CCCccCHHHHHHHHHHHHHHHHHHHHCC---eeccCCChHHeEEcCCCCEEEeecchhhcccc
Confidence 999999999998632 2346899999999999999999999988 99999999999999999999999999865422
Q ss_pred cccc---------------------------ccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCC
Q 003605 565 EESR---------------------------HISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMT 617 (808)
Q Consensus 565 ~~~~---------------------------~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~ 617 (808)
.... .......|+..|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~ 235 (316)
T cd05574 156 EPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGS 235 (316)
T ss_pred cccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCC
Confidence 1110 0111245788999999999888999999999999999999999999643
Q ss_pred CCCCcchhHHhhhhhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHH
Q 003605 618 QPPGQENLVAWARPLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEV 680 (808)
Q Consensus 618 ~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eV 680 (808)
... .. + ..+.+....-.........+.+++.+|++.+|++||+++..
T Consensus 236 ~~~--~~---~-----------~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~ 282 (316)
T cd05574 236 NRD--ET---F-----------SNILKKEVTFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRG 282 (316)
T ss_pred chH--HH---H-----------HHHhcCCccCCCccccCHHHHHHHHHHccCCHhHCCCchhh
Confidence 221 11 1 11111111111111245789999999999999999994443
No 267
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=2.7e-35 Score=308.85 Aligned_cols=253 Identities=25% Similarity=0.409 Sum_probs=203.5
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc-chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEee
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD-QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~-~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
++|+..+.||+|+||.||++... +++.+|+|++.... ....+++.+|++++++++|+||+++++++..++..++++||
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY 80 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence 35777889999999999999976 68899999987542 34557899999999999999999999999999999999999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCcEEeeeecccCeeecCCCcceecccccccccccc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHE-DSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDE 565 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~-~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~ 565 (808)
+++++|.+++.... ..+++..+.+++.|++.||+|||+ .+ ++|+||||+||++++++.++|+|||++......
T Consensus 81 ~~~~~L~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lH~~~~---i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~ 154 (265)
T cd06605 81 MDGGSLDKILKEVQ---GRIPERILGKIAVAVLKGLTYLHEKHK---IIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNS 154 (265)
T ss_pred cCCCcHHHHHHHcc---CCCCHHHHHHHHHHHHHHHHHHcCCCC---eecCCCCHHHEEECCCCCEEEeecccchhhHHH
Confidence 99999999986422 568899999999999999999998 76 999999999999999999999999998754322
Q ss_pred cccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCC
Q 003605 566 ESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDP 645 (808)
Q Consensus 566 ~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~ 645 (808)
.. ....++..|+|||++.+..++.++||||||+++|+|++|+.||...... ............. .
T Consensus 155 ~~----~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~----------~ 219 (265)
T cd06605 155 LA----KTFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDP-PDGIFELLQYIVN----------E 219 (265)
T ss_pred Hh----hcccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccc-cccHHHHHHHHhc----------C
Confidence 11 1256788999999999999999999999999999999999999654221 1112222211111 0
Q ss_pred CCCCCCCh-hhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 646 SLGNDVPF-DSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 646 ~l~~~~~~-~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
.. ...+. .....+.+++.+|+..+|++||++.|+++.
T Consensus 220 ~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 257 (265)
T cd06605 220 PP-PRLPSGKFSPDFQDFVNLCLIKDPRERPSYKELLEH 257 (265)
T ss_pred CC-CCCChhhcCHHHHHHHHHHcCCCchhCcCHHHHhhC
Confidence 00 00111 144678999999999999999999999754
No 268
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=3.4e-35 Score=322.39 Aligned_cols=261 Identities=25% Similarity=0.335 Sum_probs=196.4
Q ss_pred HHHhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc--cchhhHHHHHHHHHHhhcccccceeEEeeeeec----
Q 003605 405 EKATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV--DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEE---- 477 (808)
Q Consensus 405 ~~at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~--~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~---- 477 (808)
....++|...+.||+|+||.||+|... +++.||||+++.. .....+++.+|++++++++|+||+++++++...
T Consensus 11 ~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 90 (343)
T cd07878 11 WEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSIE 90 (343)
T ss_pred hhhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccccc
Confidence 345688999999999999999999864 7789999998743 223446788999999999999999999987543
Q ss_pred --cceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecc
Q 003605 478 --QARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSD 555 (808)
Q Consensus 478 --~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~D 555 (808)
...++++|++ +++|.+++. ...+++..+..++.|++.||+|||+.+ |+||||||+|||+++++.+||+|
T Consensus 91 ~~~~~~~~~~~~-~~~l~~~~~-----~~~l~~~~~~~i~~qi~~aL~~LH~~~---ivHrdikp~Nil~~~~~~~kl~D 161 (343)
T cd07878 91 NFNEVYLVTNLM-GADLNNIVK-----CQKLSDEHVQFLIYQLLRGLKYIHSAG---IIHRDLKPSNVAVNEDCELRILD 161 (343)
T ss_pred ccCcEEEEeecC-CCCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecccCChhhEEECCCCCEEEcC
Confidence 3468999988 789988774 235899999999999999999999998 99999999999999999999999
Q ss_pred cccccccccccccccccccccccccccchhhhc-CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcc
Q 003605 556 FGLARSAMDEESRHISTRVMGTFGYVAPEYAMT-GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLT 634 (808)
Q Consensus 556 FGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~ 634 (808)
||+++..... .....||..|+|||++.+ ..++.++|||||||++|||++|+.||...... ..+..+....-.
T Consensus 162 fg~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~~~~~~~~~~~ 234 (343)
T cd07878 162 FGLARQADDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYI--DQLKRIMEVVGT 234 (343)
T ss_pred CccceecCCC-----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHH--HHHHHHHHHhCC
Confidence 9999864321 123468999999999876 56889999999999999999999999643211 111111100000
Q ss_pred c-cc--------ccccccCCCCCCCCC--------hhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 635 S-RE--------GLERIIDPSLGNDVP--------FDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 635 ~-~~--------~l~~ivD~~l~~~~~--------~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
. .+ .....+. .+. ..+ ......+.+++.+|++.||++|||+.|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 235 PSPEVLKKISSEHARKYIQ-SLP-HMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred CCHHHHHhcchhhHHHHhh-ccc-cccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 0 00 0000000 000 000 0122457899999999999999999999864
No 269
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=5.5e-35 Score=311.10 Aligned_cols=253 Identities=25% Similarity=0.420 Sum_probs=200.6
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc-cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEee
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV-DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~-~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
++|++.+.||+|+||.||++... +++.||+|.++.. .....+++.+|++++.+++|+||+++++++...+..++||||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 36778899999999999999976 7899999998743 334456899999999999999999999999999999999999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCcEEeeeecccCeeecCCCcceecccccccccccc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHED-SSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDE 565 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~-~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~ 565 (808)
+++++|.++++... ....+++..+.+++.+++.||.|||+. + |+||||||+||+++.++.+||+|||++......
T Consensus 81 ~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~i~~~l~~LH~~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 156 (286)
T cd06622 81 MDAGSLDKLYAGGV-ATEGIPEDVLRRITYAVVKGLKFLKEEHN---IIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS 156 (286)
T ss_pred cCCCCHHHHHHhcc-ccCCCCHHHHHHHHHHHHHHHHHHHhcCC---EeeCCCCHHHEEECCCCCEEEeecCCcccccCC
Confidence 99999999886421 123689999999999999999999974 5 999999999999999999999999998754322
Q ss_pred cccccccccccccccccchhhhcC------CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccccccc
Q 003605 566 ESRHISTRVMGTFGYVAPEYAMTG------HLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGL 639 (808)
Q Consensus 566 ~~~~~~~~~~Gt~~Y~APE~l~~~------~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l 639 (808)
......++..|+|||.+.+. .++.++|||||||++|||++|+.||...... ....-.
T Consensus 157 ----~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~---~~~~~~---------- 219 (286)
T cd06622 157 ----LAKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYA---NIFAQL---------- 219 (286)
T ss_pred ----ccccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchh---hHHHHH----------
Confidence 12234578899999988544 3588999999999999999999999643211 111100
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 640 ERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 640 ~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
..+.+.. ....+.+....+.+++.+|++.+|++||++.++++.
T Consensus 220 ~~~~~~~-~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~ 262 (286)
T cd06622 220 SAIVDGD-PPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLEH 262 (286)
T ss_pred HHHhhcC-CCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhcC
Confidence 1111110 011223355678899999999999999999999874
No 270
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=5.4e-35 Score=315.40 Aligned_cols=256 Identities=21% Similarity=0.313 Sum_probs=200.9
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc---chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEE
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD---QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVY 484 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~---~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~ 484 (808)
++|+..+.||+|+||.||++... +++.||+|.++... ....+.+.+|+++++.++|+||+++++.+..++..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 47889999999999999999975 67899999987532 233467889999999999999999999999989999999
Q ss_pred eecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccc
Q 003605 485 ELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMD 564 (808)
Q Consensus 485 Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~ 564 (808)
||+++++|.+++.. ...+++..+..++.+++.||+|||+.+ ++||||||+||+++.++.+||+|||+++....
T Consensus 81 e~~~g~~L~~~l~~----~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~ 153 (305)
T cd05609 81 EYVEGGDCATLLKN----IGALPVDMARMYFAETVLALEYLHNYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKIGLM 153 (305)
T ss_pred ecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---ccccCCchHHEEECCCCCEEEeeCCCccccCc
Confidence 99999999999953 235899999999999999999999988 99999999999999999999999999863211
Q ss_pred ccc-------------cccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhh
Q 003605 565 EES-------------RHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARP 631 (808)
Q Consensus 565 ~~~-------------~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~ 631 (808)
... ........++..|+|||++.+..++.++|||||||++|||++|+.||..... ..+...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~------~~~~~~ 227 (305)
T cd05609 154 SLTTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTP------EELFGQ 227 (305)
T ss_pred CccccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH------HHHHHH
Confidence 000 0111224578899999999888899999999999999999999999863221 111111
Q ss_pred hcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 003605 632 LLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKL 686 (808)
Q Consensus 632 ~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~ 686 (808)
.... .+..+.. .......+.+++.+|++.+|++||++.++.+.|+.
T Consensus 228 ~~~~-----~~~~~~~----~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 228 VISD-----DIEWPEG----DEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred HHhc-----ccCCCCc----cccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 1100 0001111 11234568999999999999999998776666653
No 271
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=1.7e-35 Score=323.44 Aligned_cols=236 Identities=22% Similarity=0.278 Sum_probs=183.5
Q ss_pred eeecCcEEEEEEEee-CCCEEEEEEeeccc---chhhHHHHHHHHHHhhc---ccccceeEEeeeeeccceEEEEeecCC
Q 003605 417 LGEGGFGLVYSGVLD-DGTKVAVKVLKRVD---QQGGREFLAEVEMLSRL---HHRNLVKLIGICIEEQARCLVYELIPN 489 (808)
Q Consensus 417 LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~---~~~~~~f~~Ei~iL~~L---~HpNIV~L~g~~~~~~~~~LV~Ey~~~ 489 (808)
||+|+||+||+|+.. +++.||||++.... ......+..|..++.++ +|+||+++++++.+.+..++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 699999999999865 68999999996422 22334556677777765 699999999999999999999999999
Q ss_pred CCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccccc
Q 003605 490 GSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRH 569 (808)
Q Consensus 490 GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~ 569 (808)
|+|.+++.. ...+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+++...... .
T Consensus 81 g~L~~~l~~----~~~~~~~~~~~~~~qil~al~~LH~~~---ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~--~ 151 (330)
T cd05586 81 GELFWHLQK----EGRFSEDRAKFYIAELVLALEHLHKYD---IVYRDLKPENILLDATGHIALCDFGLSKANLTDN--K 151 (330)
T ss_pred ChHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eEeccCCHHHeEECCCCCEEEecCCcCcCCCCCC--C
Confidence 999998852 345899999999999999999999998 9999999999999999999999999987533221 1
Q ss_pred cccccccccccccchhhhcC-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCC
Q 003605 570 ISTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLG 648 (808)
Q Consensus 570 ~~~~~~Gt~~Y~APE~l~~~-~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~ 648 (808)
......||..|+|||++.+. .++.++|||||||+||||+||+.||..... ........... ..+.
T Consensus 152 ~~~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~------~~~~~~i~~~~--------~~~~ 217 (330)
T cd05586 152 TTNTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDT------QQMYRNIAFGK--------VRFP 217 (330)
T ss_pred CccCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCH------HHHHHHHHcCC--------CCCC
Confidence 22345689999999998765 478999999999999999999999964321 11111111000 0010
Q ss_pred CCCChhhHHHHHHHHHHccccCCCCCCCHH
Q 003605 649 NDVPFDSVAKVAAIASMCVQPEVQHRPFMG 678 (808)
Q Consensus 649 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~ 678 (808)
.......+.+++.+||+.+|++||++.
T Consensus 218 ---~~~~~~~~~~li~~~L~~~P~~R~~~~ 244 (330)
T cd05586 218 ---KNVLSDEGRQFVKGLLNRNPQHRLGAH 244 (330)
T ss_pred ---CccCCHHHHHHHHHHcCCCHHHCCCCC
Confidence 011235678999999999999999543
No 272
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=8.8e-35 Score=310.33 Aligned_cols=263 Identities=23% Similarity=0.327 Sum_probs=196.2
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccc-hhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEee
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQ-QGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~-~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
++|+..+.||+|++|.||+|... +++.||||.++.... .....+.+|++++++++|+||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 67889999999999999999976 689999999874322 2234677899999999999999999999999999999999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEE 566 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~ 566 (808)
+. ++|.+++... ...+++.....++.|++.||.|||+.+ |+||||||+|||++.++.+||+|||+++......
T Consensus 85 ~~-~~L~~~~~~~---~~~~~~~~~~~~~~ql~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~ 157 (291)
T cd07844 85 LD-TDLKQYMDDC---GGGLSMHNVRLFLFQLLRGLAYCHQRR---VLHRDLKPQNLLISERGELKLADFGLARAKSVPS 157 (291)
T ss_pred CC-CCHHHHHHhC---CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCHHHEEEcCCCCEEECccccccccCCCC
Confidence 97 5999988632 236889999999999999999999988 9999999999999999999999999987532211
Q ss_pred ccccccccccccccccchhhhc-CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccc--ccccc---
Q 003605 567 SRHISTRVMGTFGYVAPEYAMT-GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTS--REGLE--- 640 (808)
Q Consensus 567 ~~~~~~~~~Gt~~Y~APE~l~~-~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~--~~~l~--- 640 (808)
.......++..|+|||++.+ ..++.++|||||||++|||++|+.||...... .....-....+.. .+...
T Consensus 158 --~~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 233 (291)
T cd07844 158 --KTYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDV--EDQLHKIFRVLGTPTEETWPGVS 233 (291)
T ss_pred --ccccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccH--HHHHHHHHHhcCCCChhhhhhhh
Confidence 11122346788999998875 45789999999999999999999999643311 0000000000000 00000
Q ss_pred ---c-------cc-CCCCCCCC-ChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 641 ---R-------II-DPSLGNDV-PFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 641 ---~-------iv-D~~l~~~~-~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
. .. ...+.... .......+.+++.+||+.+|++||++.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 234 SNPEFKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred hccccccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 0 00 00000000 1112257789999999999999999999875
No 273
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.6e-36 Score=305.00 Aligned_cols=250 Identities=28% Similarity=0.349 Sum_probs=207.2
Q ss_pred hCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc---cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEE
Q 003605 408 TGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV---DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLV 483 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~---~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV 483 (808)
-++|++.+.||+|.||.||.|+.+ ++-.||+|++.+. ..+...++.+|++|-+.|+||||+++++|+.+....||+
T Consensus 21 l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyLi 100 (281)
T KOG0580|consen 21 LDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYLI 100 (281)
T ss_pred hhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEEE
Confidence 357889999999999999999966 6788999998642 233456899999999999999999999999999999999
Q ss_pred EeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccc
Q 003605 484 YELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAM 563 (808)
Q Consensus 484 ~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~ 563 (808)
+||..+|.|...|.+. ....+++.....+..|+|.||.|+|..+ ||||||||+|+|++.++..||+|||.+....
T Consensus 101 lEya~~gel~k~L~~~--~~~~f~e~~~a~Yi~q~A~Al~y~h~k~---VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p 175 (281)
T KOG0580|consen 101 LEYAPRGELYKDLQEG--RMKRFDEQRAATYIKQLANALLYCHLKR---VIHRDIKPENLLLGSAGELKIADFGWSVHAP 175 (281)
T ss_pred EEecCCchHHHHHHhc--ccccccccchhHHHHHHHHHHHHhccCC---cccCCCCHHHhccCCCCCeeccCCCceeecC
Confidence 9999999999999742 3345788888999999999999999887 9999999999999999999999999986432
Q ss_pred cccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccccccccccc
Q 003605 564 DEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERII 643 (808)
Q Consensus 564 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~iv 643 (808)
.......+||..|.+||...+..++.+.|+|++|++.||++.|..||+.... . +...+|.
T Consensus 176 ----~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~~---~-------------etYkrI~ 235 (281)
T KOG0580|consen 176 ----SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQSH---S-------------ETYKRIR 235 (281)
T ss_pred ----CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhhh---H-------------HHHHHHH
Confidence 2334567899999999999999999999999999999999999999975331 1 1111111
Q ss_pred CCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 003605 644 DPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQAL 684 (808)
Q Consensus 644 D~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~L 684 (808)
.-. -.++........+++.+|+..+|.+|....||++.-
T Consensus 236 k~~--~~~p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~hp 274 (281)
T KOG0580|consen 236 KVD--LKFPSTISGGAADLISRLLVKNPIERLALTEVMDHP 274 (281)
T ss_pred Hcc--ccCCcccChhHHHHHHHHhccCccccccHHHHhhhH
Confidence 111 112233446788999999999999999999998753
No 274
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=5e-35 Score=310.26 Aligned_cols=263 Identities=23% Similarity=0.288 Sum_probs=201.1
Q ss_pred CcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc--chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEee
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD--QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~--~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
+|++.+.||+|+||.||+|... +|+.||||++.... ....+.+.+|++++++++|+||+++++++...+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4788899999999999999965 78999999987543 33456899999999999999999999999999999999999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEE 566 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~ 566 (808)
+ +++|.++++.. ...+++.+++.++.|+++||+|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~-~~~L~~~~~~~---~~~~~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~ 153 (286)
T cd07832 81 M-PSDLSEVLRDE---ERPLPEAQVKSYMRMLLKGVAYMHANG---IMHRDLKPANLLISADGVLKIADFGLARLFSEEE 153 (286)
T ss_pred c-CCCHHHHHHhc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCcCHHHEEEcCCCcEEEeeeeecccccCCC
Confidence 9 99999998632 246999999999999999999999988 9999999999999999999999999987654322
Q ss_pred ccccccccccccccccchhhhcC-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcc-----------
Q 003605 567 SRHISTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLT----------- 634 (808)
Q Consensus 567 ~~~~~~~~~Gt~~Y~APE~l~~~-~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~----------- 634 (808)
. .......++..|+|||++.+. .++.++|||||||+++||+||+.+|..... .....+......
T Consensus 154 ~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 229 (286)
T cd07832 154 P-RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGEND---IEQLAIVFRTLGTPNEETWPGLT 229 (286)
T ss_pred C-CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCH---HHHHHHHHHHcCCCChHHHhhcc
Confidence 1 112334688999999988654 468999999999999999999777754321 111111111000
Q ss_pred cccccccccCCCC----CCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 635 SREGLERIIDPSL----GNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 635 ~~~~l~~ivD~~l----~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
.......+..+.- ......+....+.+++.+|++.+|++||+++++++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~h 282 (286)
T cd07832 230 SLPDYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALRH 282 (286)
T ss_pred CcchhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0000000000000 000111334788999999999999999999999764
No 275
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=1.5e-34 Score=298.03 Aligned_cols=249 Identities=28% Similarity=0.458 Sum_probs=203.4
Q ss_pred CcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecC
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIP 488 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~ 488 (808)
+|+..+.||+|++|.||++... +++.+++|+++.......+++.+|++++++++|+|++++++++...+..++++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 4778899999999999999976 788999999986555566789999999999999999999999999999999999999
Q ss_pred CCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccccc
Q 003605 489 NGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESR 568 (808)
Q Consensus 489 ~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~ 568 (808)
+++|.+++... ...+++..+..++.+++.||+|||+.+ ++||||+|+||++++++.++|+|||.+........
T Consensus 81 ~~~L~~~~~~~---~~~~~~~~~~~i~~~i~~~l~~lh~~~---i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~- 153 (253)
T cd05122 81 GGSLKDLLKST---NQTLTESQIAYVCKELLKGLEYLHSNG---IIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA- 153 (253)
T ss_pred CCcHHHHHhhc---CCCCCHHHHHHHHHHHHHHHHHhhcCC---EecCCCCHHHEEEccCCeEEEeecccccccccccc-
Confidence 99999998642 246899999999999999999999987 99999999999999999999999999876543221
Q ss_pred ccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCC
Q 003605 569 HISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLG 648 (808)
Q Consensus 569 ~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~ 648 (808)
.....++..|++||++....++.++||||||+++++|++|+.||...... ..+.... ......+.
T Consensus 154 --~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~--~~~~~~~------~~~~~~~~----- 218 (253)
T cd05122 154 --RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPM--KALFKIA------TNGPPGLR----- 218 (253)
T ss_pred --ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchH--HHHHHHH------hcCCCCcC-----
Confidence 23456888999999999888999999999999999999999998643211 0000000 00000010
Q ss_pred CCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 649 NDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 649 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
........+.+++.+|++.+|++||++.|+++
T Consensus 219 --~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 219 --NPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred --cccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 01112467899999999999999999999975
No 276
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=1.1e-34 Score=311.80 Aligned_cols=250 Identities=25% Similarity=0.363 Sum_probs=203.2
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeec
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELI 487 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~ 487 (808)
++|...+.||+|+||.||++... ++..||+|.+........+.+.+|+.++++++|+||++++++|...+..++|+||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 67888999999999999999854 67899999987555555678999999999999999999999999999999999999
Q ss_pred CCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccc
Q 003605 488 PNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEES 567 (808)
Q Consensus 488 ~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~ 567 (808)
++++|.+++.. ..+++.+++.++.+++.||+|||+.+ ++||||||+||+++.++.+||+|||++........
T Consensus 99 ~~~~L~~~~~~-----~~l~~~~~~~i~~~l~~al~~LH~~g---i~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~ 170 (293)
T cd06647 99 AGGSLTDVVTE-----TCMDEGQIAAVCRECLQALEFLHSNQ---VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS 170 (293)
T ss_pred CCCcHHHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhCC---EeeccCCHHHEEEcCCCCEEEccCcceeccccccc
Confidence 99999999852 24789999999999999999999998 99999999999999999999999999875433221
Q ss_pred cccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCC
Q 003605 568 RHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSL 647 (808)
Q Consensus 568 ~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l 647 (808)
......++..|++||++....++.++|||||||++|||++|+.||........ +..+ .. ....
T Consensus 171 --~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~--~~~~----~~---------~~~~ 233 (293)
T cd06647 171 --KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA--LYLI----AT---------NGTP 233 (293)
T ss_pred --ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhh--eeeh----hc---------CCCC
Confidence 12234688899999999888899999999999999999999999965332110 0000 00 0000
Q ss_pred CCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 648 GNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 648 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
....+......+.+++.+||+.+|++||++.+++.+
T Consensus 234 ~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 234 ELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 001122234568899999999999999999999876
No 277
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1.2e-34 Score=306.77 Aligned_cols=248 Identities=25% Similarity=0.388 Sum_probs=199.2
Q ss_pred CcceeeeeeecCcEEEEEEEe-eCCCEEEEEEeecc-cchhhHHHHHHHHHHhhcc---cccceeEEeeeeeccceEEEE
Q 003605 410 NFDASRILGEGGFGLVYSGVL-DDGTKVAVKVLKRV-DQQGGREFLAEVEMLSRLH---HRNLVKLIGICIEEQARCLVY 484 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l-~dg~~VAVK~lk~~-~~~~~~~f~~Ei~iL~~L~---HpNIV~L~g~~~~~~~~~LV~ 484 (808)
.|+..+.||+|+||.||+|.. .+++.||+|.++.. .....+++.+|++++++++ |+|++++++++.++...++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 467778999999999999996 47899999998643 3344567889999999997 999999999999989999999
Q ss_pred eecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccc
Q 003605 485 ELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMD 564 (808)
Q Consensus 485 Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~ 564 (808)
||+++++|.++++. ..+++...+.++.+++.||+|||+.+ |+|+||+|+||++++++.++|+|||++.....
T Consensus 82 e~~~~~~L~~~~~~-----~~l~~~~~~~i~~~i~~~l~~lh~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~ 153 (277)
T cd06917 82 EYAEGGSVRTLMKA-----GPIAEKYISVIIREVLVALKYIHKVG---VIHRDIKAANILVTNTGNVKLCDFGVAALLNQ 153 (277)
T ss_pred ecCCCCcHHHHHHc-----cCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCcCHHHEEEcCCCCEEEccCCceeecCC
Confidence 99999999998852 26899999999999999999999998 99999999999999999999999999876543
Q ss_pred ccccccccccccccccccchhhhcC-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccccccccccc
Q 003605 565 EESRHISTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERII 643 (808)
Q Consensus 565 ~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~iv 643 (808)
... ......|+..|+|||++.++ .++.++|||||||++|||++|+.||...... .+.... ....
T Consensus 154 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~------~~~~~~-------~~~~ 218 (277)
T cd06917 154 NSS--KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF------RAMMLI-------PKSK 218 (277)
T ss_pred Ccc--ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh------hhhhcc-------ccCC
Confidence 321 12334688899999988754 4688999999999999999999999643221 111000 0000
Q ss_pred CCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 644 DPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 644 D~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
.+.+.. ......+.+++.+|++.+|++||++.|+++.
T Consensus 219 ~~~~~~---~~~~~~~~~~i~~~l~~~p~~R~~~~~il~~ 255 (277)
T cd06917 219 PPRLED---NGYSKLLREFVAACLDEEPKERLSAEELLKS 255 (277)
T ss_pred CCCCCc---ccCCHHHHHHHHHHcCCCcccCcCHHHHhhC
Confidence 111111 1144678999999999999999999999764
No 278
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=3.4e-35 Score=315.82 Aligned_cols=246 Identities=25% Similarity=0.382 Sum_probs=198.3
Q ss_pred eeeeeeecCcEEEEEEEee-CCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecCCCC
Q 003605 413 ASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIPNGS 491 (808)
Q Consensus 413 ~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~~Gs 491 (808)
....||+|+||.||++... ++..||||.+........+.+.+|+.++++++|+||+++++.+...+..++||||+++++
T Consensus 26 ~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~~~~ 105 (292)
T cd06658 26 SFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLEGGA 105 (292)
T ss_pred hhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCCCCc
Confidence 3467999999999999865 688999999876555666789999999999999999999999999999999999999999
Q ss_pred ccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccccccc
Q 003605 492 VESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRHIS 571 (808)
Q Consensus 492 L~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~~~ 571 (808)
|.+++.. ..+++.+++.++.|++.||+|||+.+ |+||||||+||++++++.++|+|||++....... ...
T Consensus 106 L~~~~~~-----~~l~~~~~~~~~~qi~~~l~~LH~~~---ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~--~~~ 175 (292)
T cd06658 106 LTDIVTH-----TRMNEEQIATVCLSVLRALSYLHNQG---VIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEV--PKR 175 (292)
T ss_pred HHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEcCCCCEEEccCcchhhccccc--ccC
Confidence 9998842 24889999999999999999999988 9999999999999999999999999987543221 112
Q ss_pred cccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCCCC
Q 003605 572 TRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGNDV 651 (808)
Q Consensus 572 ~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~~~ 651 (808)
....|+..|+|||++.+..++.++|||||||++|||++|+.||...... ....-. ...+.+.+..
T Consensus 176 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~---~~~~~~----------~~~~~~~~~~-- 240 (292)
T cd06658 176 KSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPL---QAMRRI----------RDNLPPRVKD-- 240 (292)
T ss_pred ceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH---HHHHHH----------HhcCCCcccc--
Confidence 2346889999999998888999999999999999999999998643211 100000 0011111111
Q ss_pred ChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 652 PFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 652 ~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
.......+.+++.+|+..+|++||+++|+++.
T Consensus 241 ~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 241 SHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred ccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 11233568899999999999999999999864
No 279
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=2.4e-34 Score=347.15 Aligned_cols=259 Identities=23% Similarity=0.352 Sum_probs=201.1
Q ss_pred HHHhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc--cchhhHHHHHHHHHHhhcccccceeEEeeeeec--cc
Q 003605 405 EKATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV--DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEE--QA 479 (808)
Q Consensus 405 ~~at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~--~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~--~~ 479 (808)
+...++|.+.+.||+|+||+||++... ++..||+|.+... .......|..|+.+|.+|+|+|||+++++|.+. ..
T Consensus 9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ 88 (1021)
T PTZ00266 9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQK 88 (1021)
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE
Confidence 345678999999999999999999965 5778999988642 334456899999999999999999999988654 46
Q ss_pred eEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCC----CcEEeeeecccCeeecCC-------
Q 003605 480 RCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSS----PRVIHRDFKSSNILLEHD------- 548 (808)
Q Consensus 480 ~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~----p~IiHrDIKpsNILLd~~------- 548 (808)
.+|||||+++|+|.++|.........+++..++.|+.||+.||+|||+.+. ..||||||||+||||+.+
T Consensus 89 lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i 168 (1021)
T PTZ00266 89 LYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKI 168 (1021)
T ss_pred EEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccc
Confidence 799999999999999997543334569999999999999999999998542 349999999999999642
Q ss_pred ----------Ccceecccccccccccccccccccccccccccccchhhhc--CCCccccceeeHHHHHHHHHhCCCCCCC
Q 003605 549 ----------FTPKVSDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMT--GHLLVKSDVYSYGVVILELLSGRKPVDM 616 (808)
Q Consensus 549 ----------~~vKL~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~--~~~s~kSDVwSfGvvLlELlTG~~P~~~ 616 (808)
..+||+|||+++..... .......||+.|+|||++.. ..++.++||||||||||||+||+.||..
T Consensus 169 ~~~~~n~ng~~iVKLsDFGlAr~l~~~---s~~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~ 245 (1021)
T PTZ00266 169 TAQANNLNGRPIAKIGDFGLSKNIGIE---SMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHK 245 (1021)
T ss_pred cccccccCCCCceEEccCCcccccccc---ccccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCc
Confidence 34899999999765322 12234568999999999864 4588999999999999999999999964
Q ss_pred CCCCCcchhHHhhhhhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 617 TQPPGQENLVAWARPLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 617 ~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
... ...+... +... +.+. .......+.+|+..||+.+|++||++.|++..
T Consensus 246 ~~~-----~~qli~~-lk~~--------p~lp---i~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~h 295 (1021)
T PTZ00266 246 ANN-----FSQLISE-LKRG--------PDLP---IKGKSKELNILIKNLLNLSAKERPSALQCLGY 295 (1021)
T ss_pred CCc-----HHHHHHH-HhcC--------CCCC---cCCCCHHHHHHHHHHhcCChhHCcCHHHHhcc
Confidence 221 1111111 1000 0000 01234678999999999999999999999853
No 280
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=1.2e-34 Score=312.26 Aligned_cols=269 Identities=20% Similarity=0.258 Sum_probs=198.4
Q ss_pred CcceeeeeeecCcEEEEEEEee---CCCEEEEEEeeccc---chhhHHHHHHHHHHhhcccccceeEEeeeeec--cceE
Q 003605 410 NFDASRILGEGGFGLVYSGVLD---DGTKVAVKVLKRVD---QQGGREFLAEVEMLSRLHHRNLVKLIGICIEE--QARC 481 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~---dg~~VAVK~lk~~~---~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~--~~~~ 481 (808)
+|++.+.||+|+||.||+|... +++.||+|.++... ....+.+.+|++++.+++|+||+++++++.+. +..+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4788899999999999999965 47899999997632 33446788999999999999999999999988 7889
Q ss_pred EEEeecCCCCccccccccccC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecC----CCcceeccc
Q 003605 482 LVYELIPNGSVESHLHGVDKE-SAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEH----DFTPKVSDF 556 (808)
Q Consensus 482 LV~Ey~~~GsL~~~L~~~~~~-~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~----~~~vKL~DF 556 (808)
+||||+++ +|.+++...... ...+++..++.|+.|++.||+|||+.+ |+||||||+|||++. ++.+||+||
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~---i~h~dlkp~Nil~~~~~~~~~~~kl~Df 156 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNW---VLHRDLKPANILVMGEGPERGVVKIGDL 156 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCC---EeeCCCCHHHEEEcCCCCccceEEECCC
Confidence 99999964 677766433222 236889999999999999999999988 999999999999999 899999999
Q ss_pred ccccccccccc-cccccccccccccccchhhhcC-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCc-------chhHH
Q 003605 557 GLARSAMDEES-RHISTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQ-------ENLVA 627 (808)
Q Consensus 557 GLa~~~~~~~~-~~~~~~~~Gt~~Y~APE~l~~~-~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~-------~~lv~ 627 (808)
|+++....... ........++..|+|||++.+. .++.++|||||||+|+||++|+.||........ ..+..
T Consensus 157 g~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (316)
T cd07842 157 GLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLER 236 (316)
T ss_pred ccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHH
Confidence 99986543222 1112234678899999988764 578999999999999999999999975443220 01111
Q ss_pred hhhhhc----------ccccccccccCCCCCCCCC-----------hhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 628 WARPLL----------TSREGLERIIDPSLGNDVP-----------FDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 628 w~~~~~----------~~~~~l~~ivD~~l~~~~~-----------~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
....+- ..........+......++ .....++.+++.+||+.||++||++.|+++
T Consensus 237 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 237 IFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 100000 0000000000000000111 033457899999999999999999999975
No 281
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=1.2e-34 Score=310.14 Aligned_cols=244 Identities=26% Similarity=0.375 Sum_probs=199.7
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc---cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEE
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV---DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVY 484 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~---~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~ 484 (808)
++|.+.+.||+|+||.||++... +++.||+|.++.. .....+.+.+|++++++++|+||+++++++.+++..++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 47889999999999999999865 6899999998753 2234567889999999999999999999999999999999
Q ss_pred eecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccc
Q 003605 485 ELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMD 564 (808)
Q Consensus 485 Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~ 564 (808)
||+++++|.++++. ...+++..+..++.|++.||+|||+.+ ++||||+|+|||++.++.+||+|||+++....
T Consensus 81 e~~~~~~L~~~~~~----~~~l~~~~~~~~~~qil~~l~~lH~~~---i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~ 153 (290)
T cd05580 81 EYVPGGELFSHLRK----SGRFPEPVARFYAAQVVLALEYLHSLD---IVYRDLKPENLLLDSDGYIKITDFGFAKRVKG 153 (290)
T ss_pred ecCCCCCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---EecCCCCHHHEEECCCCCEEEeeCCCccccCC
Confidence 99999999999853 246899999999999999999999988 99999999999999999999999999886543
Q ss_pred ccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccC
Q 003605 565 EESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIID 644 (808)
Q Consensus 565 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD 644 (808)
. .....++..|+|||.+.+...+.++||||||+++|||++|+.||..... ...... +..
T Consensus 154 ~-----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~---~~~~~~-------------~~~ 212 (290)
T cd05580 154 R-----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP---IQIYEK-------------ILE 212 (290)
T ss_pred C-----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH---HHHHHH-------------Hhc
Confidence 2 2334688999999999888889999999999999999999999864321 111010 111
Q ss_pred CCCCCCCChhhHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 003605 645 PSLGNDVPFDSVAKVAAIASMCVQPEVQHRP-----FMGEVVQ 682 (808)
Q Consensus 645 ~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RP-----sm~eVl~ 682 (808)
.. ...+......+.+++.+||..+|++|+ +++|+++
T Consensus 213 ~~--~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~~ 253 (290)
T cd05580 213 GK--VRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIKN 253 (290)
T ss_pred CC--ccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHHc
Confidence 00 112222346788999999999999998 6666654
No 282
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1.6e-34 Score=306.78 Aligned_cols=246 Identities=24% Similarity=0.374 Sum_probs=199.6
Q ss_pred cceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc-chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecC
Q 003605 411 FDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD-QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIP 488 (808)
Q Consensus 411 f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~-~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~ 488 (808)
|+..+.||+|+||.||+|... +++.||||.+.... ....+.|.+|++++.+++|+||+++++++.+++..++||||++
T Consensus 6 ~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~ 85 (277)
T cd06641 6 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLG 85 (277)
T ss_pred hhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEeCC
Confidence 566789999999999999864 68899999986432 3345678999999999999999999999999999999999999
Q ss_pred CCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccccc
Q 003605 489 NGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESR 568 (808)
Q Consensus 489 ~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~ 568 (808)
+++|.+++.. ..+++..+..++.+++.||+|||+.+ ++|+||||+||+++.++.++|+|||++.......
T Consensus 86 ~~~l~~~i~~-----~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~-- 155 (277)
T cd06641 86 GGSALDLLEP-----GPLDETQIATILREILKGLDYLHSEK---KIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQ-- 155 (277)
T ss_pred CCcHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHccCC---eecCCCCHHhEEECCCCCEEEeecccceecccch--
Confidence 9999999852 35899999999999999999999988 9999999999999999999999999987653322
Q ss_pred ccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCC
Q 003605 569 HISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLG 648 (808)
Q Consensus 569 ~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~ 648 (808)
.......++..|+|||++.+..++.++|||||||++|||++|..|+..... .. +...... . ..
T Consensus 156 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~---~~---~~~~~~~--~---------~~ 218 (277)
T cd06641 156 IKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHP---MK---VLFLIPK--N---------NP 218 (277)
T ss_pred hhhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccch---HH---HHHHHhc--C---------CC
Confidence 112234578899999999888899999999999999999999999864221 11 1110000 0 00
Q ss_pred CCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 649 NDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 649 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
..........+.+++.+|++.+|++||++.++++.
T Consensus 219 ~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 219 PTLEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred CCCCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 11122334678899999999999999999999985
No 283
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=7e-35 Score=303.35 Aligned_cols=250 Identities=23% Similarity=0.347 Sum_probs=204.9
Q ss_pred CcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc--cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEee
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV--DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~--~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
+|++.+.||+|+||.||++... +++.+|+|.++.. ......++.+|++++++++|+||+++++++.+....++||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 5788999999999999999854 7889999998753 234456788999999999999999999999999999999999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEE 566 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~ 566 (808)
+++++|.+++.........+++..++.++.+++.||+|||+.+ ++|+||+|+||++++++.+||+|||+++.....
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~---i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~- 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQK---ILHRDLKSANILLVANDLVKIGDLGISKVLKKN- 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCcceEEEecCCcEEEeeccchhhhccC-
Confidence 9999999998654333457899999999999999999999988 999999999999999999999999999765432
Q ss_pred ccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCC
Q 003605 567 SRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPS 646 (808)
Q Consensus 567 ~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~ 646 (808)
......++..|++||++.+..++.++|+||||+++|||++|+.||..... ..+.... ...
T Consensus 157 ---~~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~---~~~~~~~--------------~~~ 216 (256)
T cd08530 157 ---MAKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSM---QDLRYKV--------------QRG 216 (256)
T ss_pred ---CcccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHH--------------hcC
Confidence 22234578899999999998999999999999999999999999964321 1111110 001
Q ss_pred CCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 647 LGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 647 l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
.....+......+.+++.+|+..+|++||++.|+++.
T Consensus 217 ~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~~ 253 (256)
T cd08530 217 KYPPIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILAS 253 (256)
T ss_pred CCCCCchhhCHHHHHHHHHHcCCCcccCCCHHHHhcC
Confidence 1111223445679999999999999999999999763
No 284
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=1.2e-34 Score=309.79 Aligned_cols=267 Identities=21% Similarity=0.268 Sum_probs=196.9
Q ss_pred HhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc-chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEE
Q 003605 407 ATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD-QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVY 484 (808)
Q Consensus 407 at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~-~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~ 484 (808)
++++|.+.+.||+|+||.||+|... +++.||+|+++... ......+.+|++++++++|+||+++.+++..++..++|+
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 4578999999999999999999864 68899999987533 223346789999999999999999999999989999999
Q ss_pred eecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccc
Q 003605 485 ELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMD 564 (808)
Q Consensus 485 Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~ 564 (808)
||+. ++|.+++.. ....+.+..+..++.|++.||+|||+.+ |+|+||||+|||++.++++||+|||+++....
T Consensus 83 e~~~-~~l~~~~~~---~~~~~~~~~~~~~~~qi~~~L~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~ 155 (291)
T cd07870 83 EYMH-TDLAQYMIQ---HPGGLHPYNVRLFMFQLLRGLAYIHGQH---ILHRDLKPQNLLISYLGELKLADFGLARAKSI 155 (291)
T ss_pred eccc-CCHHHHHHh---CCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCChHHEEEcCCCcEEEeccccccccCC
Confidence 9995 677777642 2235788899999999999999999988 99999999999999999999999999875432
Q ss_pred ccccccccccccccccccchhhhcC-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccc--------
Q 003605 565 EESRHISTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTS-------- 635 (808)
Q Consensus 565 ~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~-------- 635 (808)
... ......++..|+|||++.+. .++.++|||||||++|||++|+.||+........-...|...-...
T Consensus 156 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (291)
T cd07870 156 PSQ--TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVS 233 (291)
T ss_pred CCC--CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhh
Confidence 211 11233468899999988754 5788999999999999999999999754321110000110000000
Q ss_pred --ccccccccC---C-CCCCC-CChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 636 --REGLERIID---P-SLGND-VPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 636 --~~~l~~ivD---~-~l~~~-~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
......... + .+... ........+.+++.+|++.||++|||+.|++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 234 KLPNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred hcccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 000000000 0 00000 00112457889999999999999999999864
No 285
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-35 Score=315.96 Aligned_cols=267 Identities=25% Similarity=0.331 Sum_probs=206.0
Q ss_pred HhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeec--ccchhhHHHHHHHHHHhhcccccceeEEeeeee-----cc
Q 003605 407 ATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKR--VDQQGGREFLAEVEMLSRLHHRNLVKLIGICIE-----EQ 478 (808)
Q Consensus 407 at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~--~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~-----~~ 478 (808)
....|...+.||+|+||.|+++... +|+.||||++.+ .+....++-.+|+++|++++|+||+.+++.+.. -+
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 4556666789999999999999965 789999999973 455667888999999999999999999999865 25
Q ss_pred ceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccc
Q 003605 479 ARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGL 558 (808)
Q Consensus 479 ~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGL 558 (808)
..|+|+|+| .-+|...++ .+..|+.+....+..|+++||.|+|+.+ |+||||||+|+|++.+...||+||||
T Consensus 100 DvYiV~elM-etDL~~iik----~~~~L~d~H~q~f~YQiLrgLKyiHSAn---ViHRDLKPsNll~n~~c~lKI~DFGL 171 (359)
T KOG0660|consen 100 DVYLVFELM-ETDLHQIIK----SQQDLTDDHAQYFLYQILRGLKYIHSAN---VIHRDLKPSNLLLNADCDLKICDFGL 171 (359)
T ss_pred eeEEehhHH-hhHHHHHHH----cCccccHHHHHHHHHHHHHhcchhhccc---ccccccchhheeeccCCCEEeccccc
Confidence 679999999 558888885 3445899999999999999999999998 99999999999999999999999999
Q ss_pred ccccccccccccccccccccccccchhhhc-CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccccc
Q 003605 559 ARSAMDEESRHISTRVMGTFGYVAPEYAMT-GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSRE 637 (808)
Q Consensus 559 a~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~ 637 (808)
|+...........+..+.|.+|.|||++.+ ..|+.+.||||.||||.||++|+.-|...+...+..+........ ..+
T Consensus 172 AR~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP-~~e 250 (359)
T KOG0660|consen 172 ARYLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKDYVHQLQLILELLGTP-SEE 250 (359)
T ss_pred eeeccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCC-CHH
Confidence 997654322233356678999999998764 578999999999999999999999887655433322222111111 011
Q ss_pred cccccc--------C--CC-----CCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 638 GLERII--------D--PS-----LGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 638 ~l~~iv--------D--~~-----l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
.+..+- . +. +..-+ .......++|+.+||..||.+|+|++|.++.
T Consensus 251 ~l~~i~s~~ar~yi~slp~~p~~~f~~~f-p~a~p~AidLlekmL~fdP~kRita~eAL~h 310 (359)
T KOG0660|consen 251 DLQKIRSEKARPYIKSLPQIPKQPFSSIF-PNANPLAIDLLEKMLVFDPKKRITAEEALAH 310 (359)
T ss_pred HHHHhccHHHHHHHHhCCCCCCCCHHHHc-CCCCHHHHHHHHHHhccCccccCCHHHHhcC
Confidence 111111 0 00 00011 1345678899999999999999999999775
No 286
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=2.5e-35 Score=310.22 Aligned_cols=264 Identities=22% Similarity=0.273 Sum_probs=198.9
Q ss_pred CcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccch-h-hHHHHHHHHHHhhcccccceeEEeeeeec--cceEEEE
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQQ-G-GREFLAEVEMLSRLHHRNLVKLIGICIEE--QARCLVY 484 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~~-~-~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~--~~~~LV~ 484 (808)
.|+..+.|++|.||.||+|+.+ +++.||+|+++-..+. + --..++||.+|.+++|+|||.+..+.... +..||||
T Consensus 77 efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy~VM 156 (419)
T KOG0663|consen 77 EFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIYIVM 156 (419)
T ss_pred HHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceeeeeH
Confidence 4556789999999999999965 7899999999843211 1 12467999999999999999999887543 5689999
Q ss_pred eecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccc
Q 003605 485 ELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMD 564 (808)
Q Consensus 485 Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~ 564 (808)
|||+. +|...++.. ..++...+..-+..|+++|++|||.+. |+|||||++|+|+.+.|.+||+||||||.+..
T Consensus 157 e~~Eh-DLksl~d~m---~q~F~~~evK~L~~QlL~glk~lH~~w---ilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygs 229 (419)
T KOG0663|consen 157 EYVEH-DLKSLMETM---KQPFLPGEVKTLMLQLLRGLKHLHDNW---ILHRDLKTSNLLLSHKGILKIADFGLAREYGS 229 (419)
T ss_pred HHHHh-hHHHHHHhc---cCCCchHHHHHHHHHHHHHHHHHhhce---eEecccchhheeeccCCcEEecccchhhhhcC
Confidence 99976 898888643 356888899999999999999999998 99999999999999999999999999997754
Q ss_pred ccccccccccccccccccchhhhc-CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhc--cccccccc
Q 003605 565 EESRHISTRVMGTFGYVAPEYAMT-GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLL--TSREGLER 641 (808)
Q Consensus 565 ~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~--~~~~~l~~ 641 (808)
. ....+..+-|.+|+|||.+.+ ..|+...|+||+|||+.||++++.-|......++.+.+--....- .....+.+
T Consensus 230 p--~k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwpg~~~ 307 (419)
T KOG0663|consen 230 P--LKPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWPGYSE 307 (419)
T ss_pred C--cccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCCCccc
Confidence 3 334567788999999999886 468999999999999999999998886654433322111000000 00001111
Q ss_pred c-----------cCCCCCCCCChh-hHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 642 I-----------IDPSLGNDVPFD-SVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 642 i-----------vD~~l~~~~~~~-~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
+ .-..++..+... ....-.+|+...|..||++|-|+.|-++
T Consensus 308 lp~~k~~~f~~~pyn~lr~kF~~~~lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 308 LPAVKKMTFSEHPYNNLRKKFGALSLSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred cchhhccccCCCCchhhhhhccccccchhHHHHHHHHhccCccccccHHHhhc
Confidence 0 001112222211 2356778999999999999999999765
No 287
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=6.5e-35 Score=314.41 Aligned_cols=245 Identities=24% Similarity=0.355 Sum_probs=197.9
Q ss_pred eeeeeecCcEEEEEEEee-CCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecCCCCc
Q 003605 414 SRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIPNGSV 492 (808)
Q Consensus 414 ~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~~GsL 492 (808)
...||+|+||.||++... +++.||+|.++.......+.+.+|+.++..++|+||+++++++..++..++|+||+++++|
T Consensus 26 ~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~~~L 105 (297)
T cd06659 26 YIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQGGAL 105 (297)
T ss_pred hhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCCCCH
Confidence 457999999999999865 6899999999765555567889999999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccccccccc
Q 003605 493 ESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRHIST 572 (808)
Q Consensus 493 ~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~~~~ 572 (808)
.+++.. ..+++..++.++.|++.||+|||+.+ ++||||||+||+++.++.+||+|||++....... ....
T Consensus 106 ~~~~~~-----~~~~~~~~~~~~~qi~~~L~~LH~~~---ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~--~~~~ 175 (297)
T cd06659 106 TDIVSQ-----TRLNEEQIATVCESVLQALCYLHSQG---VIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDV--PKRK 175 (297)
T ss_pred HHHHhh-----cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHeEEccCCcEEEeechhHhhccccc--cccc
Confidence 987742 35899999999999999999999988 9999999999999999999999999987543221 1122
Q ss_pred ccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCCCCC
Q 003605 573 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGNDVP 652 (808)
Q Consensus 573 ~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~~~~ 652 (808)
...|+..|+|||++.+..++.++|||||||++|||++|+.||..... .......... ...... ..
T Consensus 176 ~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~---~~~~~~~~~~----------~~~~~~--~~ 240 (297)
T cd06659 176 SLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSP---VQAMKRLRDS----------PPPKLK--NA 240 (297)
T ss_pred ceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHhcc----------CCCCcc--cc
Confidence 35688999999999988899999999999999999999999964321 1111111000 000000 01
Q ss_pred hhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 653 FDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 653 ~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
......+.+++.+|++.+|++||++.||++.
T Consensus 241 ~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 241 HKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred CCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 1223568899999999999999999999885
No 288
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1.7e-34 Score=307.70 Aligned_cols=254 Identities=25% Similarity=0.373 Sum_probs=205.0
Q ss_pred HHhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEE
Q 003605 406 KATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVY 484 (808)
Q Consensus 406 ~at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~ 484 (808)
..+++|+..+.||+|+||.||+|..+ ++..|++|+++.... ..+.+.+|++++++++|+|++++++++...+..++|+
T Consensus 16 ~~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 94 (286)
T cd06614 16 DPRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVM 94 (286)
T ss_pred CccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEE
Confidence 35677888899999999999999987 688999999976444 5678899999999999999999999999999999999
Q ss_pred eecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccc
Q 003605 485 ELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMD 564 (808)
Q Consensus 485 Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~ 564 (808)
||+++++|.+++.... ..+++..++.++.+++.||+|||+.+ ++|+||+|+||+++.++.++|+|||++.....
T Consensus 95 e~~~~~~L~~~l~~~~---~~l~~~~~~~i~~~i~~~L~~lH~~g---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~ 168 (286)
T cd06614 95 EYMDGGSLTDIITQNF---VRMNEPQIAYVCREVLQGLEYLHSQN---VIHRDIKSDNILLSKDGSVKLADFGFAAQLTK 168 (286)
T ss_pred eccCCCcHHHHHHHhc---cCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCChhhEEEcCCCCEEECccchhhhhcc
Confidence 9999999999996422 36999999999999999999999987 99999999999999999999999999865432
Q ss_pred ccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccC
Q 003605 565 EESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIID 644 (808)
Q Consensus 565 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD 644 (808)
.. .......++..|++||++.+..++.++|||||||++|||++|+.||...... .....+. . .....+
T Consensus 169 ~~--~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~--~~~~~~~----~--~~~~~~-- 236 (286)
T cd06614 169 EK--SKRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL--RALFLIT----T--KGIPPL-- 236 (286)
T ss_pred ch--hhhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHH----h--cCCCCC--
Confidence 21 1122345788999999998888999999999999999999999998642211 1111110 0 000000
Q ss_pred CCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 645 PSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 645 ~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
.........+.+++.+|++.+|.+||++.+|++.
T Consensus 237 -----~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~ 270 (286)
T cd06614 237 -----KNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQH 270 (286)
T ss_pred -----cchhhCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 0111134678899999999999999999999864
No 289
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-35 Score=311.73 Aligned_cols=270 Identities=23% Similarity=0.358 Sum_probs=226.8
Q ss_pred CHHHHHHHhCCcceeeeeeecCcEEEEEEEee------CCCEEEEEEeecc-cchhhHHHHHHHHHHhhcccccceeEEe
Q 003605 400 SASEIEKATGNFDASRILGEGGFGLVYSGVLD------DGTKVAVKVLKRV-DQQGGREFLAEVEMLSRLHHRNLVKLIG 472 (808)
Q Consensus 400 s~~el~~at~~f~~~~~LG~G~fG~VYkg~l~------dg~~VAVK~lk~~-~~~~~~~f~~Ei~iL~~L~HpNIV~L~g 472 (808)
...+|.....+++...++.+|.||.||.|.+. +.+.|.||.++.. ++-....++.|--++..+.|+|+..+.+
T Consensus 275 r~~~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~ 354 (563)
T KOG1024|consen 275 RLQELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLG 354 (563)
T ss_pred hHHhhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeE
Confidence 34567777788999999999999999999654 3456788988754 4455678999999999999999999999
Q ss_pred eeeec-cceEEEEeecCCCCcccccccccc----CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecC
Q 003605 473 ICIEE-QARCLVYELIPNGSVESHLHGVDK----ESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEH 547 (808)
Q Consensus 473 ~~~~~-~~~~LV~Ey~~~GsL~~~L~~~~~----~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~ 547 (808)
++.++ ...+.+|.++.-|+|..||..++. ..+.+...+...+|.|++.||+|||+++ |||.||.++|++||+
T Consensus 355 V~ie~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~---ViHkDiAaRNCvIdd 431 (563)
T KOG1024|consen 355 VSIEDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHG---VIHKDIAARNCVIDD 431 (563)
T ss_pred EEeeccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcC---cccchhhhhcceehh
Confidence 99876 456889999999999999984432 2345778889999999999999999998 999999999999999
Q ss_pred CCcceecccccccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhH
Q 003605 548 DFTPKVSDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLV 626 (808)
Q Consensus 548 ~~~vKL~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv 626 (808)
..++||+|-.|+|.+...++............||++|.+.+..|+.++|||||||+||||+| |+.|+..-++.+
T Consensus 432 ~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfE----- 506 (563)
T KOG1024|consen 432 QLQVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFE----- 506 (563)
T ss_pred heeEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHH-----
Confidence 99999999999999999888888887788899999999999999999999999999999999 999986443321
Q ss_pred HhhhhhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHH
Q 003605 627 AWARPLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLVCN 689 (808)
Q Consensus 627 ~w~~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~~ 689 (808)
++..+....+-.-|.++..++..++.-||+..|++||+++|++.-|.+...
T Consensus 507 ------------m~~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~ 557 (563)
T KOG1024|consen 507 ------------MEHYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHT 557 (563)
T ss_pred ------------HHHHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHH
Confidence 111222233334466788999999999999999999999999988876543
No 290
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=1.3e-34 Score=301.91 Aligned_cols=250 Identities=22% Similarity=0.351 Sum_probs=200.9
Q ss_pred CcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc--cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEee
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV--DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~--~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
+|...+.||+|+||.||+|... +|..+|+|.+... .....+.+.+|++++++++|+||+++++.+.+.+..++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 5788999999999999999976 6889999998643 223456788999999999999999999999999999999999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCC-cceecccccccccccc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDF-TPKVSDFGLARSAMDE 565 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~-~vKL~DFGLa~~~~~~ 565 (808)
+++++|.+++... ....++|..++.++.|++.||+|||+.+ ++|+||||+||++++++ .+||+|||.+......
T Consensus 81 ~~~~~L~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~lh~~~---i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~ 155 (257)
T cd08225 81 CDGGDLMKRINRQ--RGVLFSEDQILSWFVQISLGLKHIHDRK---ILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDS 155 (257)
T ss_pred CCCCcHHHHHHhc--cCCCCCHHHHHHHHHHHHHHHHHHHHCC---cccccCCHHHEEEcCCCCeEEecccccchhccCC
Confidence 9999999998642 2335899999999999999999999988 99999999999998885 4699999998765332
Q ss_pred cccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCC
Q 003605 566 ESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDP 645 (808)
Q Consensus 566 ~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~ 645 (808)
. .......|+..|+|||++.+..++.++|||||||++|||++|+.||.... ...+....... . +.
T Consensus 156 ~--~~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~------~~~~~~~~~~~--~----~~- 220 (257)
T cd08225 156 M--ELAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN------LHQLVLKICQG--Y----FA- 220 (257)
T ss_pred c--ccccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc------HHHHHHHHhcc--c----CC-
Confidence 1 11223458889999999988889999999999999999999999986422 12222211110 0 11
Q ss_pred CCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 646 SLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 646 ~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
.........+.+++.+|++.+|++||++.||++.
T Consensus 221 ----~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~ 254 (257)
T cd08225 221 ----PISPNFSRDLRSLISQLFKVSPRDRPSITSILKR 254 (257)
T ss_pred ----CCCCCCCHHHHHHHHHHhccChhhCcCHHHHhhC
Confidence 1112234578999999999999999999999763
No 291
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=2.8e-34 Score=297.83 Aligned_cols=251 Identities=26% Similarity=0.434 Sum_probs=205.9
Q ss_pred CcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc--chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEee
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD--QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~--~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
+|+..+.||+|+||.||++... ++..+|+|++.... ....+++.+|++++++++|+|++++++.+...+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 5788899999999999999975 68899999997542 35567899999999999999999999999998999999999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEE 566 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~ 566 (808)
+++++|.++++........+++.+++.++.+++.||+|||+.+ ++|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~---~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~ 157 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRK---ILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV 157 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCC---EecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence 9999999999754333467999999999999999999999998 9999999999999999999999999987653322
Q ss_pred ccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCC
Q 003605 567 SRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPS 646 (808)
Q Consensus 567 ~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~ 646 (808)
.......|+..|+|||.+....++.++||||||+++++|++|+.||+.... ......... ..
T Consensus 158 --~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~------~~~~~~~~~----------~~ 219 (258)
T cd08215 158 --DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENL------LELALKILK----------GQ 219 (258)
T ss_pred --ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcH------HHHHHHHhc----------CC
Confidence 122334688899999999888899999999999999999999999864321 111111110 00
Q ss_pred CCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 647 LGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 647 l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
....+......+.+++.+||..+|++||++.|+++
T Consensus 220 -~~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 220 -YPPIPSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred -CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 11122234567899999999999999999999976
No 292
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=2e-34 Score=311.25 Aligned_cols=246 Identities=30% Similarity=0.400 Sum_probs=195.8
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc---chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEE
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD---QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVY 484 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~---~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~ 484 (808)
+.|+..+.||+|+||.||+|... +++.||+|.+.... ....+++.+|+++++.++|+||++++++|.+.+..++|+
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 55888899999999999999865 68999999986432 234467899999999999999999999999999999999
Q ss_pred eecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccc
Q 003605 485 ELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMD 564 (808)
Q Consensus 485 Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~ 564 (808)
||+. |+|.+++.. ....+++..+..++.|++.||.|||+.+ |+||||+|+||++++++.+||+|||++.....
T Consensus 95 e~~~-g~l~~~~~~---~~~~l~~~~~~~~~~ql~~~L~~LH~~~---i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~ 167 (307)
T cd06607 95 EYCL-GSASDILEV---HKKPLQEVEIAAICHGALQGLAYLHSHE---RIHRDIKAGNILLTEPGTVKLADFGSASLVSP 167 (307)
T ss_pred HhhC-CCHHHHHHH---cccCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcccEEECCCCCEEEeecCcceecCC
Confidence 9996 677777642 2346899999999999999999999988 99999999999999999999999999875422
Q ss_pred ccccccccccccccccccchhhh---cCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccccccccc
Q 003605 565 EESRHISTRVMGTFGYVAPEYAM---TGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLER 641 (808)
Q Consensus 565 ~~~~~~~~~~~Gt~~Y~APE~l~---~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ 641 (808)
. ....++..|+|||++. .+.++.++||||||+++|||+||+.||...... ..... ... .+
T Consensus 168 ~------~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~---~~~~~---~~~-~~---- 230 (307)
T cd06607 168 A------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM---SALYH---IAQ-ND---- 230 (307)
T ss_pred C------CCccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHH---HHHHH---Hhc-CC----
Confidence 1 2345788999999874 456889999999999999999999998543211 10000 000 00
Q ss_pred ccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 642 IIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 642 ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
.+.+ ........+.+++.+||+.+|++||++.+|++.
T Consensus 231 --~~~~---~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 231 --SPTL---SSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred --CCCC---CchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0000 112344678999999999999999999999875
No 293
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.1e-34 Score=308.24 Aligned_cols=262 Identities=23% Similarity=0.310 Sum_probs=196.7
Q ss_pred CcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc--chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEee
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD--QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~--~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
+|+..+.||+|+||.||+|+.. +++.||||+++... ....+.+.+|++++++++|+||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 5888999999999999999865 78999999986432 22345788999999999999999999999999999999999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEE 566 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~ 566 (808)
+. ++|.++++... ...+++..++.++.|++.||+|||+.+ ++||||+|+||+++.++.+||+|||+++......
T Consensus 81 ~~-~~l~~~~~~~~--~~~l~~~~~~~~~~~i~~~l~~lh~~~---i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~ 154 (284)
T cd07860 81 LH-QDLKKFMDASP--LSGIPLPLIKSYLFQLLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV 154 (284)
T ss_pred cc-cCHHHHHHhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEeeccchhhcccCc
Confidence 95 68988886422 346899999999999999999999988 9999999999999999999999999987543221
Q ss_pred ccccccccccccccccchhhhcCC-CccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccc---------
Q 003605 567 SRHISTRVMGTFGYVAPEYAMTGH-LLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSR--------- 636 (808)
Q Consensus 567 ~~~~~~~~~Gt~~Y~APE~l~~~~-~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~--------- 636 (808)
.......++..|+|||++.+.. ++.++|||||||++|||+||+.||..... ...+.......-...
T Consensus 155 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 230 (284)
T cd07860 155 --RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE--IDQLFRIFRTLGTPDEVVWPGVTS 230 (284)
T ss_pred --cccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH--HHHHHHHHHHhCCCChhhhhhhhH
Confidence 1122335688999999876644 58899999999999999999999864321 111111110000000
Q ss_pred -----cccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 637 -----EGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 637 -----~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
..........+. .........+.+++.+|++.||++||+++|+++
T Consensus 231 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 231 LPDYKPSFPKWARQDFS-KVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred HHHHHhhcccccccCHH-HHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 000000000000 000112356789999999999999999999975
No 294
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=1.8e-34 Score=308.51 Aligned_cols=265 Identities=22% Similarity=0.308 Sum_probs=198.5
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc--chhhHHHHHHHHHHhhcccccceeEEeeeeec--cceEEE
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD--QQGGREFLAEVEMLSRLHHRNLVKLIGICIEE--QARCLV 483 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~--~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~--~~~~LV 483 (808)
++|+..+.||+|+||.||+|... +++.+|+|.++... ......+.+|++++++++|+||+++++++... +..++|
T Consensus 5 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~lv 84 (293)
T cd07843 5 DEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYMV 84 (293)
T ss_pred hhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEEE
Confidence 46888899999999999999976 68899999997432 22234678899999999999999999999877 889999
Q ss_pred EeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccc
Q 003605 484 YELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAM 563 (808)
Q Consensus 484 ~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~ 563 (808)
|||+. ++|.+++... ...+++.+++.++.|++.||+|||+.+ ++|+||||+|||+++++.+||+|||+++...
T Consensus 85 ~e~~~-~~L~~~~~~~---~~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~~l~d~g~~~~~~ 157 (293)
T cd07843 85 MEYVE-HDLKSLMETM---KQPFLQSEVKCLMLQLLSGVAHLHDNW---ILHRDLKTSNLLLNNRGILKICDFGLAREYG 157 (293)
T ss_pred ehhcC-cCHHHHHHhc---cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCCHHHEEECCCCcEEEeecCceeecc
Confidence 99996 5998888632 236899999999999999999999988 9999999999999999999999999988654
Q ss_pred cccccccccccccccccccchhhhcC-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCc-chhHH---------hhh--
Q 003605 564 DEESRHISTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQ-ENLVA---------WAR-- 630 (808)
Q Consensus 564 ~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~-~~lv~---------w~~-- 630 (808)
.... ......++..|+|||++.+. .++.++||||||+++|||++|+.||........ ..+.. |..
T Consensus 158 ~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (293)
T cd07843 158 SPLK--PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWPGFS 235 (293)
T ss_pred CCcc--ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHHHhh
Confidence 3221 11234578899999988754 468999999999999999999999975332110 00000 100
Q ss_pred hhcccc-cccccccCCCCCCCCChh-hHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 631 PLLTSR-EGLERIIDPSLGNDVPFD-SVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 631 ~~~~~~-~~l~~ivD~~l~~~~~~~-~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
.+.... ..........+...++.. ....+.+++.+|++.+|++||++.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 236 ELPGAKKKTFTKYPYNQLRKKFPALSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred ccchhcccccccccchhhhccccccCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 000000 000011111111222222 3567889999999999999999999975
No 295
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1.9e-34 Score=307.93 Aligned_cols=266 Identities=20% Similarity=0.256 Sum_probs=195.7
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc--chhhHHHHHHHHHHhhcc-cccceeEEeeeeeccc-----
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD--QQGGREFLAEVEMLSRLH-HRNLVKLIGICIEEQA----- 479 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~--~~~~~~f~~Ei~iL~~L~-HpNIV~L~g~~~~~~~----- 479 (808)
++|+..+.||+|+||.||+|... +++.||||.++... ......+.+|++++++++ |+||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 47889999999999999999965 68999999886432 223467889999999995 6999999999887665
Q ss_pred eEEEEeecCCCCccccccccccC-CCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecC-CCcceecccc
Q 003605 480 RCLVYELIPNGSVESHLHGVDKE-SAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEH-DFTPKVSDFG 557 (808)
Q Consensus 480 ~~LV~Ey~~~GsL~~~L~~~~~~-~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~-~~~vKL~DFG 557 (808)
.++||||+++ +|.+++...... ...+++..++.++.|+++||+|||+.+ |+||||||+||+++. ++.+||+|||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~~~nil~~~~~~~~kl~dfg 156 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHG---VMHRDLKPQNLLVDKQKGLLKIADLG 156 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEecCCCeEEEeecc
Confidence 7999999975 898888643322 346899999999999999999999988 999999999999998 8899999999
Q ss_pred cccccccccccccccccccccccccchhhhc-CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccc-
Q 003605 558 LARSAMDEESRHISTRVMGTFGYVAPEYAMT-GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTS- 635 (808)
Q Consensus 558 La~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~- 635 (808)
+++...... .......+++.|+|||++.+ ..++.++||||||+++|||++|..||...... ..+..........
T Consensus 157 ~~~~~~~~~--~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~--~~~~~~~~~~~~~~ 232 (295)
T cd07837 157 LGRAFSIPV--KSYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSEL--QQLLHIFKLLGTPT 232 (295)
T ss_pred cceecCCCc--cccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHH--HHHHHHHHHhCCCC
Confidence 987543221 11122346788999998865 45789999999999999999999998643211 1111100000000
Q ss_pred ccccccc---cC----CCCC----CCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 636 REGLERI---ID----PSLG----NDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 636 ~~~l~~i---vD----~~l~----~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
....... .+ +... ..........+.+++.+||+.+|++||++.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 233 EQVWPGVSKLRDWHEFPQWKPQDLSRAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred hhhCcchhhccchhhcCcccchhHHHhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 0000000 00 0000 0001123467889999999999999999999875
No 296
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=1.5e-34 Score=308.87 Aligned_cols=267 Identities=23% Similarity=0.297 Sum_probs=200.1
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccch--hhHHHHHHHHHHhhccccc-ceeEEeeeeecc------
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQQ--GGREFLAEVEMLSRLHHRN-LVKLIGICIEEQ------ 478 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~~--~~~~f~~Ei~iL~~L~HpN-IV~L~g~~~~~~------ 478 (808)
..|...++||+|+||+||+|+.. +|+.||+|+++-...+ .-....+|+.+|.+|+|+| ||+|++++...+
T Consensus 11 ~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~~ 90 (323)
T KOG0594|consen 11 FDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGIG 90 (323)
T ss_pred HHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeecccccccc
Confidence 34555678999999999999955 7899999999754331 2345689999999999999 999999998877
Q ss_pred ceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccc
Q 003605 479 ARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGL 558 (808)
Q Consensus 479 ~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGL 558 (808)
..+||+||+. -+|..++.........++...+..++.|+++||+|||+++ |+||||||.||||++++.+||+|||+
T Consensus 91 ~l~lvfe~~d-~DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~---IlHRDLKPQNlLi~~~G~lKlaDFGl 166 (323)
T KOG0594|consen 91 KLYLVFEFLD-RDLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHG---ILHRDLKPQNLLISSSGVLKLADFGL 166 (323)
T ss_pred eEEEEEEeec-ccHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCC---eecccCCcceEEECCCCcEeeeccch
Confidence 7789999995 5999999765433245777889999999999999999998 99999999999999999999999999
Q ss_pred ccccccccccccccccccccccccchhhhcC-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhc----
Q 003605 559 ARSAMDEESRHISTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLL---- 633 (808)
Q Consensus 559 a~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~---- 633 (808)
|+...-. ....+..++|.+|+|||++.+. .|+...||||+|||+.||++++.-|......+ .+..-.+-+-
T Consensus 167 Ara~~ip--~~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~--ql~~If~~lGtP~e 242 (323)
T KOG0594|consen 167 ARAFSIP--MRTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEID--QLFRIFRLLGTPNE 242 (323)
T ss_pred HHHhcCC--cccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHH--HHHHHHHHcCCCCc
Confidence 9865422 2224566789999999999876 78999999999999999999988886544311 1111000000
Q ss_pred ccccccccccCC--CCCCCC-C----h---hhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 634 TSREGLERIIDP--SLGNDV-P----F---DSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 634 ~~~~~l~~ivD~--~l~~~~-~----~---~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
........+.+- .+.... + . .......+++.+|++.+|.+|.+++..+++
T Consensus 243 ~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 243 KDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred cCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 000111111110 010000 0 0 111468899999999999999999999875
No 297
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=2e-34 Score=301.96 Aligned_cols=247 Identities=26% Similarity=0.324 Sum_probs=201.8
Q ss_pred CcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc---chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEe
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD---QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYE 485 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~---~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~E 485 (808)
+|++.+.||+|+||.||++... +++.||+|.+.... ....+++.+|++++++++|+||+++++++.+.+..++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 5888999999999999999976 68999999997432 2446789999999999999999999999999999999999
Q ss_pred ecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccc
Q 003605 486 LIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDE 565 (808)
Q Consensus 486 y~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~ 565 (808)
|+.+++|.+++.. ...+++.++..|+.|+++||+|||+.+ ++|+||+|+||++++++.++|+|||++......
T Consensus 81 ~~~~~~L~~~l~~----~~~l~~~~~~~~~~~i~~~l~~lh~~~---i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~ 153 (258)
T cd05578 81 LLLGGDLRYHLSQ----KVKFSEEQVKFWICEIVLALEYLHSKG---IIHRDIKPDNILLDEQGHVHITDFNIATKVTPD 153 (258)
T ss_pred CCCCCCHHHHHHh----cCCcCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEEcCCCCEEEeecccccccCCC
Confidence 9999999999853 246899999999999999999999988 999999999999999999999999998765432
Q ss_pred cccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCC
Q 003605 566 ESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDP 645 (808)
Q Consensus 566 ~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~ 645 (808)
. ......|+..|+|||++.+..++.++||||||+++|+|++|+.||....... ..+.......
T Consensus 154 ~---~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~----~~~~~~~~~~---------- 216 (258)
T cd05578 154 T---LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRTI----RDQIRAKQET---------- 216 (258)
T ss_pred c---cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCccH----HHHHHHHhcc----------
Confidence 2 1223457889999999998889999999999999999999999997543221 1111111100
Q ss_pred CCCCCCChhhHHHHHHHHHHccccCCCCCCCH--HHHH
Q 003605 646 SLGNDVPFDSVAKVAAIASMCVQPEVQHRPFM--GEVV 681 (808)
Q Consensus 646 ~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm--~eVl 681 (808)
.....+......+.+++.+|++.+|.+||++ +|++
T Consensus 217 -~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 217 -ADVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred -ccccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 0111223344788999999999999999999 5553
No 298
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=3.3e-34 Score=306.59 Aligned_cols=247 Identities=24% Similarity=0.382 Sum_probs=199.7
Q ss_pred cceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecCC
Q 003605 411 FDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIPN 489 (808)
Q Consensus 411 f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~~ 489 (808)
|...+.||+|++|.||++... +++.+++|+++.......+.+.+|+.++++++|+||+++++++...+..++|+||+.+
T Consensus 21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~~ 100 (285)
T cd06648 21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLEG 100 (285)
T ss_pred hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccCC
Confidence 444579999999999999864 7889999998765555567789999999999999999999999999999999999999
Q ss_pred CCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccccc
Q 003605 490 GSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRH 569 (808)
Q Consensus 490 GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~ 569 (808)
++|.+++.. ..+++.+++.++.|++.||+|||+.+ ++||||+|+||+++.++.++|+|||++....... .
T Consensus 101 ~~L~~~~~~-----~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~--~ 170 (285)
T cd06648 101 GALTDIVTH-----TRMNEEQIATVCLAVLKALSFLHAQG---VIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEV--P 170 (285)
T ss_pred CCHHHHHHh-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCChhhEEEcCCCcEEEcccccchhhccCC--c
Confidence 999999853 35899999999999999999999998 9999999999999999999999999887543221 1
Q ss_pred cccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCC
Q 003605 570 ISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGN 649 (808)
Q Consensus 570 ~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~ 649 (808)
......|+..|+|||.+.+..++.++|||||||++|||++|+.||..... ..+....... ..+.+..
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~------~~~~~~~~~~-------~~~~~~~ 237 (285)
T cd06648 171 RRKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPP------LQAMKRIRDN-------LPPKLKN 237 (285)
T ss_pred ccccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCH------HHHHHHHHhc-------CCCCCcc
Confidence 11234588999999999888899999999999999999999999864221 1111111100 0011111
Q ss_pred CCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 650 DVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 650 ~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
.......+.+++.+||+.+|++||++.++++
T Consensus 238 --~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 238 --LHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred --cccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 1123467999999999999999999999975
No 299
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=3.9e-34 Score=310.97 Aligned_cols=247 Identities=29% Similarity=0.386 Sum_probs=196.2
Q ss_pred cceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc---chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEee
Q 003605 411 FDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD---QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 411 f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~---~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
|...+.||+|+||.||+|+.. ++..||+|++.... ....+++.+|++++++++|+|++++++++.+++..++||||
T Consensus 27 f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 106 (317)
T cd06635 27 FTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVMEY 106 (317)
T ss_pred hhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEeC
Confidence 667789999999999999964 68899999986432 23345788999999999999999999999999999999999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEE 566 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~ 566 (808)
+. |+|.+++.. ....++|.++..++.+++.||.|||+.+ |+||||+|+||+++.++.+||+|||++......
T Consensus 107 ~~-g~l~~~~~~---~~~~l~~~~~~~i~~~i~~~l~~lH~~~---i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~- 178 (317)
T cd06635 107 CL-GSASDLLEV---HKKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASIASPA- 178 (317)
T ss_pred CC-CCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCcccEEECCCCCEEEecCCCccccCCc-
Confidence 96 588777742 2346899999999999999999999988 999999999999999999999999998654221
Q ss_pred ccccccccccccccccchhhh---cCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccccccccccc
Q 003605 567 SRHISTRVMGTFGYVAPEYAM---TGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERII 643 (808)
Q Consensus 567 ~~~~~~~~~Gt~~Y~APE~l~---~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~iv 643 (808)
....|+..|+|||++. .+.++.++|||||||++|||++|+.||..... ...+..+..
T Consensus 179 -----~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~--~~~~~~~~~------------- 238 (317)
T cd06635 179 -----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNA--MSALYHIAQ------------- 238 (317)
T ss_pred -----ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccH--HHHHHHHHh-------------
Confidence 2345788999999874 45788999999999999999999999854211 111111110
Q ss_pred CCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 003605 644 DPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKL 686 (808)
Q Consensus 644 D~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~ 686 (808)
..............+.+++.+|++.+|++||++.+|++.+..
T Consensus 239 -~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~~~ 280 (317)
T cd06635 239 -NESPTLQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHMFV 280 (317)
T ss_pred -ccCCCCCCccccHHHHHHHHHHccCCcccCcCHHHHHhChhh
Confidence 000011112344578999999999999999999999986543
No 300
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=1.9e-34 Score=326.96 Aligned_cols=262 Identities=23% Similarity=0.289 Sum_probs=200.2
Q ss_pred CcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccchhhHHHHHHHHHHhhcc-c-----ccceeEEeeeeeccceEE
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQQGGREFLAEVEMLSRLH-H-----RNLVKLIGICIEEQARCL 482 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~-H-----pNIV~L~g~~~~~~~~~L 482 (808)
+|++.++||+|.||.|.|+... +++.||||+++.. ..-.++-..|+.+|..|+ | -|+|++++|+...++.||
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~-k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK-KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC-hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 8999999999999999999854 7999999999863 344566778999999997 4 489999999999999999
Q ss_pred EEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCC--Ccceeccccccc
Q 003605 483 VYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHD--FTPKVSDFGLAR 560 (808)
Q Consensus 483 V~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~--~~vKL~DFGLa~ 560 (808)
|+|.+ .-+|.++|+... -..++...+..|+.||+.||.+||+.+ |||+||||+||||.+- .++||+|||.+.
T Consensus 266 VfELL-~~NLYellK~n~--f~Glsl~~ir~~~~Qil~~L~~L~~l~---IIHcDLKPENILL~~~~r~~vKVIDFGSSc 339 (586)
T KOG0667|consen 266 VFELL-STNLYELLKNNK--FRGLSLPLVRKFAQQILTALLFLHELG---IIHCDLKPENILLKDPKRSRIKVIDFGSSC 339 (586)
T ss_pred eehhh-hhhHHHHHHhcC--CCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeccCChhheeeccCCcCceeEEeccccc
Confidence 99999 459999998543 345889999999999999999999998 9999999999999653 589999999998
Q ss_pred ccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHH--------hh---
Q 003605 561 SAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVA--------WA--- 629 (808)
Q Consensus 561 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~--------w~--- 629 (808)
.....-. ...-+..|+|||++.+..|+.+.||||||||+.||++|..-|-.....++...+. |.
T Consensus 340 ~~~q~vy-----tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~mL~~ 414 (586)
T KOG0667|consen 340 FESQRVY-----TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPKMLDT 414 (586)
T ss_pred ccCCcce-----eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHHHHHh
Confidence 6433222 3445778999999999999999999999999999999977775443322211110 00
Q ss_pred ----hhhccc----------ccc------------cccccCCCC--------CCCCChhhHHHHHHHHHHccccCCCCCC
Q 003605 630 ----RPLLTS----------REG------------LERIIDPSL--------GNDVPFDSVAKVAAIASMCVQPEVQHRP 675 (808)
Q Consensus 630 ----~~~~~~----------~~~------------l~~ivD~~l--------~~~~~~~~~~~l~~Li~~Cl~~dP~~RP 675 (808)
....+. .+. .....+... ........-..+++++++||..||.+|+
T Consensus 415 ~~~~~kff~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~P~~~~~l~~~~~~~~~~~F~dflk~~L~~dP~~R~ 494 (586)
T KOG0667|consen 415 AKKAHKFFTSLKGFPRLCVETSAPRGTKSPEVRKYYRKARLERRGPPGSRSLESGLPKADDKLFIDFLKRCLEWDPAERI 494 (586)
T ss_pred ccccceehhccCCceeeeeeecccccccchhhhhhhhhhcccccCCCCCcccchhcccccHHHHHHHHHHHhccCchhcC
Confidence 000000 000 000000000 0011124456789999999999999999
Q ss_pred CHHHHHHH
Q 003605 676 FMGEVVQA 683 (808)
Q Consensus 676 sm~eVl~~ 683 (808)
|..|.++.
T Consensus 495 tp~qal~H 502 (586)
T KOG0667|consen 495 TPAQALNH 502 (586)
T ss_pred CHHHHhcC
Confidence 99999875
No 301
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=4.1e-34 Score=306.76 Aligned_cols=265 Identities=22% Similarity=0.306 Sum_probs=194.4
Q ss_pred hCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc--chhhHHHHHHHHHHhhcccccceeEEeeeeecc------
Q 003605 408 TGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD--QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQ------ 478 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~--~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~------ 478 (808)
-++|+..+.||+|+||.||+|... +++.||||++.... ......+.+|++++++++|+||++++++|...+
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 357899999999999999999965 68999999986432 222345678999999999999999999987654
Q ss_pred --ceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccc
Q 003605 479 --ARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDF 556 (808)
Q Consensus 479 --~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DF 556 (808)
..++||||+. ++|.+++.. ....+++.+++.++.|++.||+|||+++ ++|+||||+||+++.++.+||+||
T Consensus 91 ~~~~~lv~e~~~-~~l~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~df 163 (310)
T cd07865 91 KGSFYLVFEFCE-HDLAGLLSN---KNVKFTLSEIKKVMKMLLNGLYYIHRNK---ILHRDMKAANILITKDGILKLADF 163 (310)
T ss_pred CceEEEEEcCCC-cCHHHHHHh---cccCCCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHEEECCCCcEEECcC
Confidence 3499999996 588887753 2336899999999999999999999998 999999999999999999999999
Q ss_pred cccccccccccc--ccccccccccccccchhhhcC-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhc
Q 003605 557 GLARSAMDEESR--HISTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLL 633 (808)
Q Consensus 557 GLa~~~~~~~~~--~~~~~~~Gt~~Y~APE~l~~~-~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~ 633 (808)
|++......... .......++..|+|||++.+. .++.++||||||+++|||+||+.||...................
T Consensus 164 g~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~ 243 (310)
T cd07865 164 GLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSI 243 (310)
T ss_pred CCcccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCC
Confidence 999765332211 111234578899999988664 46889999999999999999999986543211111111110000
Q ss_pred c-----cccccc---c---------ccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 634 T-----SREGLE---R---------IIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 634 ~-----~~~~l~---~---------ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
. ...... . .+...+. .......+.+++.+||..||++||+++|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 244 TPEVWPGVDKLELFKKMELPQGQKRKVKERLK---PYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred ChhhcccccchhhhhhccCCCccchhhHHhcc---cccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 0 000000 0 0000000 0012346779999999999999999999975
No 302
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=3.8e-34 Score=302.95 Aligned_cols=258 Identities=24% Similarity=0.315 Sum_probs=193.8
Q ss_pred cceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc-cchhhHHHHHHHHHHhhcc-cccceeEEeeeeec--cceEEEEe
Q 003605 411 FDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV-DQQGGREFLAEVEMLSRLH-HRNLVKLIGICIEE--QARCLVYE 485 (808)
Q Consensus 411 f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~-~~~~~~~f~~Ei~iL~~L~-HpNIV~L~g~~~~~--~~~~LV~E 485 (808)
|++.+.||+|+||.||+|... +++.||+|+++.. .........+|+.++.++. |+|++++++++.+. +..++|+|
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 567889999999999999865 6899999998753 2223345567999999985 99999999999887 88999999
Q ss_pred ecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccc
Q 003605 486 LIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDE 565 (808)
Q Consensus 486 y~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~ 565 (808)
|+. |+|.+++.. ....++|.+++.++.|++.||+|||+.+ ++||||||+||+++. +.+||+|||+++.....
T Consensus 81 ~~~-~~l~~~l~~---~~~~~~~~~~~~~~~qi~~~L~~LH~~~---i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~ 152 (282)
T cd07831 81 LMD-MNLYELIKG---RKRPLPEKRVKSYMYQLLKSLDHMHRNG---IFHRDIKPENILIKD-DILKLADFGSCRGIYSK 152 (282)
T ss_pred cCC-ccHHHHHHh---ccCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecccCHHHEEEcC-CCeEEEecccccccccC
Confidence 996 688888753 2246899999999999999999999988 999999999999999 99999999999765332
Q ss_pred cccccccccccccccccchhhhc-CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccc-ccccc---
Q 003605 566 ESRHISTRVMGTFGYVAPEYAMT-GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTS-REGLE--- 640 (808)
Q Consensus 566 ~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~-~~~l~--- 640 (808)
.. .....++..|+|||++.. +.++.++|||||||++|||++|..||..... .+.+.+....... .+.+.
T Consensus 153 ~~---~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 226 (282)
T cd07831 153 PP---YTEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNE---LDQIAKIHDVLGTPDAEVLKKF 226 (282)
T ss_pred CC---cCCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCH---HHHHHHHHHHcCCCCHHHHHhh
Confidence 11 123457889999997654 5578899999999999999999999965332 1222222111100 00000
Q ss_pred ------cccCCC-CCC---CCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 641 ------RIIDPS-LGN---DVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 641 ------~ivD~~-l~~---~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
....+. ... .........+.+++.+||+.+|++||++.++++
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 227 RKSRHMNYNFPSKKGTGLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred cccccccccCcccccccHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 000000 000 001134578999999999999999999999976
No 303
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=4.6e-34 Score=302.98 Aligned_cols=264 Identities=22% Similarity=0.295 Sum_probs=198.2
Q ss_pred CcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccc-hhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeec
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQ-QGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELI 487 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~-~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~ 487 (808)
+|+..+.||+|++|.||+|+.. +|+.||||+++.... ...+.+.+|++++++++|+||+++++++.+.+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 5888999999999999999975 688999999875432 23467788999999999999999999999999999999999
Q ss_pred CCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccc
Q 003605 488 PNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEES 567 (808)
Q Consensus 488 ~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~ 567 (808)
+ ++|.+++..... ...+++..+++++.|++.||+|||+.+ ++||||||+||++++++.++|+|||+++......
T Consensus 81 ~-~~l~~~~~~~~~-~~~~~~~~~~~~~~qi~~~l~~lH~~~---i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~- 154 (284)
T cd07836 81 D-KDLKKYMDTHGV-RGALDPNTVKSFTYQLLKGIAFCHENR---VLHRDLKPQNLLINKRGELKLADFGLARAFGIPV- 154 (284)
T ss_pred C-ccHHHHHHhcCC-CCCcCHHHHHHHHHHHHHHHHHHHHCC---eeeCCCCHHHEEECCCCcEEEeecchhhhhcCCc-
Confidence 7 488888864322 246899999999999999999999988 9999999999999999999999999987543211
Q ss_pred cccccccccccccccchhhhcC-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCc-chhHHhhhhhcccccccccccC-
Q 003605 568 RHISTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQ-ENLVAWARPLLTSREGLERIID- 644 (808)
Q Consensus 568 ~~~~~~~~Gt~~Y~APE~l~~~-~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~-~~lv~w~~~~~~~~~~l~~ivD- 644 (808)
.......++..|++||++.+. .++.++|||||||++|||++|+.||......+. ..+........ ......+.+
T Consensus 155 -~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 231 (284)
T cd07836 155 -NTFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPT--ESTWPGISQL 231 (284)
T ss_pred -cccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCC--hhhHHHHhcC
Confidence 111234568899999988654 568899999999999999999999875432111 00000000000 000000000
Q ss_pred CCCCCC-----------CChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 645 PSLGND-----------VPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 645 ~~l~~~-----------~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
+.+... ........+.+++.+|++.+|++||++.||++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 232 PEYKPTFPRYPPQDLQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred chhcccccCCChHHHHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 000000 11123456889999999999999999999975
No 304
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=2.8e-34 Score=303.88 Aligned_cols=264 Identities=22% Similarity=0.302 Sum_probs=197.4
Q ss_pred cceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc--chhhHHHHHHHHHHhhcccccceeEEeeeeec--cceEEEEe
Q 003605 411 FDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD--QQGGREFLAEVEMLSRLHHRNLVKLIGICIEE--QARCLVYE 485 (808)
Q Consensus 411 f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~--~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~--~~~~LV~E 485 (808)
|++.+.||+|+||.||+|+.. +++.+|+|+++... ....+.+.+|++++++++|+|++++++++... +..++|+|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 567889999999999999976 58899999998642 33446788999999999999999999999887 78999999
Q ss_pred ecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccc
Q 003605 486 LIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDE 565 (808)
Q Consensus 486 y~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~ 565 (808)
|++ ++|.+++... ...+++.+++.++.|+++||+|||+.+ ++|+||||+||++++++.+||+|||++......
T Consensus 81 ~~~-~~l~~~~~~~---~~~~~~~~~~~i~~~i~~al~~LH~~~---~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~ 153 (287)
T cd07840 81 YMD-HDLTGLLDSP---EVKFTESQIKCYMKQLLEGLQYLHSNG---ILHRDIKGSNILINNDGVLKLADFGLARPYTKR 153 (287)
T ss_pred ccc-ccHHHHHhcc---CCCCCHHHHHHHHHHHHHHHHHHHHCC---ceeccCcHHHeEEcCCCCEEEccccceeeccCC
Confidence 997 4888888532 246899999999999999999999988 999999999999999999999999999765433
Q ss_pred cccccccccccccccccchhhhc-CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcc-hhHHhhhhhccc-ccccccc
Q 003605 566 ESRHISTRVMGTFGYVAPEYAMT-GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQE-NLVAWARPLLTS-REGLERI 642 (808)
Q Consensus 566 ~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~-~lv~w~~~~~~~-~~~l~~i 642 (808)
.. ...+...++..|+|||.+.+ ..++.++||||||+++|||+||+.||+........ .+.......... ......+
T Consensus 154 ~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd07840 154 NS-ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWPGVSKL 232 (287)
T ss_pred Cc-ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhccccccc
Confidence 21 11223456788999997764 45789999999999999999999999754321110 000100000000 0000000
Q ss_pred -----------cCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 643 -----------IDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 643 -----------vD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
....+...+...+...+.+++.+|++.+|++||+++++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 233 PWFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred hhhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 0000000111112567899999999999999999999976
No 305
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=2e-34 Score=307.08 Aligned_cols=255 Identities=26% Similarity=0.394 Sum_probs=195.1
Q ss_pred CcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc-cchhhHHHHHHHHHHhhcc-cccceeEEeeeeeccceEEEEee
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV-DQQGGREFLAEVEMLSRLH-HRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~-~~~~~~~f~~Ei~iL~~L~-HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
+|...+.||+|+||.||++... +++.||+|.+... .......+.+|+.++.++. |+||+++++++..++..+++|||
T Consensus 5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e~ 84 (288)
T cd06616 5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICMEL 84 (288)
T ss_pred HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEec
Confidence 3445678999999999999865 6899999998743 2344567899999999996 99999999999998999999999
Q ss_pred cCCCCcccccccc-ccCCCCCCHHHHHHHHHHHHHHHHHHHhc-CCCcEEeeeecccCeeecCCCcceeccccccccccc
Q 003605 487 IPNGSVESHLHGV-DKESAPLGWDARLKIALGAARALAYLHED-SSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMD 564 (808)
Q Consensus 487 ~~~GsL~~~L~~~-~~~~~~L~~~~~l~Ia~qia~gL~yLH~~-~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~ 564 (808)
+. ++|.++.... ......+++..+.+++.+++.||+|||+. + ++||||||+|||++.++.+||+|||+++....
T Consensus 85 ~~-~~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~---i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~ 160 (288)
T cd06616 85 MD-ISLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELK---IIHRDVKPSNILLDRNGNIKLCDFGISGQLVD 160 (288)
T ss_pred cc-CCHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCC---eeccCCCHHHEEEccCCcEEEeecchhHHhcc
Confidence 85 4655543211 12234689999999999999999999975 5 99999999999999999999999999875432
Q ss_pred ccccccccccccccccccchhhhcC---CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccccccccc
Q 003605 565 EESRHISTRVMGTFGYVAPEYAMTG---HLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLER 641 (808)
Q Consensus 565 ~~~~~~~~~~~Gt~~Y~APE~l~~~---~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ 641 (808)
.. ......|+..|+|||++.+. .++.++|||||||++|||++|+.||.... ...........
T Consensus 161 ~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~-----~~~~~~~~~~~------- 225 (288)
T cd06616 161 SI---AKTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN-----SVFDQLTQVVK------- 225 (288)
T ss_pred CC---ccccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc-----hHHHHHhhhcC-------
Confidence 21 11233578899999998776 68999999999999999999999986432 11111111100
Q ss_pred ccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 642 IIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 642 ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
...+.+...........+.+++.+|++.+|++||++.||++.
T Consensus 226 ~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 226 GDPPILSNSEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred CCCCcCCCcCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 001112222223355689999999999999999999999875
No 306
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=2.8e-34 Score=304.81 Aligned_cols=261 Identities=23% Similarity=0.314 Sum_probs=196.5
Q ss_pred cceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc--chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeec
Q 003605 411 FDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD--QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELI 487 (808)
Q Consensus 411 f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~--~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~ 487 (808)
|+..+.||+|++|.||+|... +|+.||+|++.... ....+.+.+|++++++++|+|++++++++.+.+..+++|||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 566789999999999999865 79999999987432 223467889999999999999999999999999999999999
Q ss_pred CCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccc
Q 003605 488 PNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEES 567 (808)
Q Consensus 488 ~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~ 567 (808)
+++|.+++.... ...+++..+++++.|+++||+|||+.+ ++||||+|+||+++.++.++|+|||+++......
T Consensus 81 -~~~l~~~~~~~~--~~~~~~~~~~~~~~~i~~~L~~lH~~~---~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~- 153 (283)
T cd07835 81 -DLDLKKYMDSSP--LTGLDPPLIKSYLYQLLQGIAYCHSHR---VLHRDLKPQNLLIDREGALKLADFGLARAFGVPV- 153 (283)
T ss_pred -CcCHHHHHhhCC--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeCCCCCHHHEEEcCCCcEEEeecccccccCCCc-
Confidence 479999886422 136899999999999999999999987 9999999999999999999999999987543211
Q ss_pred cccccccccccccccchhhhcC-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccccc---------
Q 003605 568 RHISTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSRE--------- 637 (808)
Q Consensus 568 ~~~~~~~~Gt~~Y~APE~l~~~-~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~--------- 637 (808)
.......++..|+|||++.+. .++.++|||||||++|||++|+.||..... ...+....+......+
T Consensus 154 -~~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (283)
T cd07835 154 -RTYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSE--IDQLFRIFRTLGTPDEDVWPGVTSL 230 (283)
T ss_pred -cccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHhCCCChHHhhhhhhc
Confidence 111223468899999987654 568899999999999999999999864322 1111111110000000
Q ss_pred -c----cccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 638 -G----LERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 638 -~----l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
. ......... ..........+.+++.+|++.+|++||+++|+++
T Consensus 231 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 231 PDYKPTFPKWARQDL-SKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred hhhhhhcccccccch-hhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0 000000000 1111233467889999999999999999999975
No 307
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=5.8e-34 Score=299.08 Aligned_cols=242 Identities=23% Similarity=0.298 Sum_probs=195.2
Q ss_pred eeecCcEEEEEEEee-CCCEEEEEEeeccc---chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecCCCCc
Q 003605 417 LGEGGFGLVYSGVLD-DGTKVAVKVLKRVD---QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIPNGSV 492 (808)
Q Consensus 417 LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~---~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~~GsL 492 (808)
||+|+||.||+++.. +++.||+|++.... ....+.+.+|++++++++|+||+++++++.+++..++|+||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 689999999999976 58899999986432 23456899999999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccccccccc
Q 003605 493 ESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRHIST 572 (808)
Q Consensus 493 ~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~~~~ 572 (808)
.++++. ...+++..+..++.|++.||+|||+.+ ++|+||+|+||+++.++.++|+|||+++...... ...
T Consensus 81 ~~~l~~----~~~l~~~~~~~~~~~i~~~l~~lH~~~---~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~---~~~ 150 (262)
T cd05572 81 WTILRD----RGLFDEYTARFYIACVVLAFEYLHNRG---IIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ---KTW 150 (262)
T ss_pred HHHHhh----cCCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEEcCCCCEEEeeCCcccccCccc---ccc
Confidence 999963 235889999999999999999999988 9999999999999999999999999998654322 122
Q ss_pred ccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCCCCC
Q 003605 573 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGNDVP 652 (808)
Q Consensus 573 ~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~~~~ 652 (808)
...++..|++||.+.+..++.++||||||+++|||++|..||...... ....... +.+......++
T Consensus 151 ~~~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~----~~~~~~~----------~~~~~~~~~~~ 216 (262)
T cd05572 151 TFCGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDED----PMEIYND----------ILKGNGKLEFP 216 (262)
T ss_pred cccCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCC----HHHHHHH----------HhccCCCCCCC
Confidence 345788999999998888999999999999999999999999654321 1111111 11111112223
Q ss_pred hhhHHHHHHHHHHccccCCCCCCC-----HHHHHH
Q 003605 653 FDSVAKVAAIASMCVQPEVQHRPF-----MGEVVQ 682 (808)
Q Consensus 653 ~~~~~~l~~Li~~Cl~~dP~~RPs-----m~eVl~ 682 (808)
......+.+++.+||+.+|++||+ ++|+++
T Consensus 217 ~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 217 NYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred cccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 333568999999999999999999 566544
No 308
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7.2e-35 Score=322.32 Aligned_cols=254 Identities=21% Similarity=0.332 Sum_probs=208.7
Q ss_pred HhCCcceeeeeeecCcEEEEEEEeeCCCEEEEEEee--cccchhhHHHHHHHHHHhhcc-cccceeEEeeeeeccceEEE
Q 003605 407 ATGNFDASRILGEGGFGLVYSGVLDDGTKVAVKVLK--RVDQQGGREFLAEVEMLSRLH-HRNLVKLIGICIEEQARCLV 483 (808)
Q Consensus 407 at~~f~~~~~LG~G~fG~VYkg~l~dg~~VAVK~lk--~~~~~~~~~f~~Ei~iL~~L~-HpNIV~L~g~~~~~~~~~LV 483 (808)
....|++.+.||+||.++||++...+.+.+|+|++. ..+.+...-|..||++|.+|+ |.+||+|++|-..++.+|||
T Consensus 359 kg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmv 438 (677)
T KOG0596|consen 359 KGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMV 438 (677)
T ss_pred CcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEE
Confidence 345688889999999999999998888999999875 356777888999999999996 99999999999999999999
Q ss_pred EeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccc
Q 003605 484 YELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAM 563 (808)
Q Consensus 484 ~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~ 563 (808)
|||= +.+|..+|++. .....+| .+..+..|++.|+.++|.++ |||.||||.|+|+- .|.+||+|||+|....
T Consensus 439 mE~G-d~DL~kiL~k~--~~~~~~~-~lk~ywkqML~aV~~IH~~g---IVHSDLKPANFLlV-kG~LKLIDFGIA~aI~ 510 (677)
T KOG0596|consen 439 MECG-DIDLNKILKKK--KSIDPDW-FLKFYWKQMLLAVKTIHQHG---IVHSDLKPANFLLV-KGRLKLIDFGIANAIQ 510 (677)
T ss_pred eecc-cccHHHHHHhc--cCCCchH-HHHHHHHHHHHHHHHHHHhc---eeecCCCcccEEEE-eeeEEeeeechhcccC
Confidence 9976 56999999743 2334556 77888999999999999999 99999999999995 4599999999999877
Q ss_pred cccccccccccccccccccchhhhcC-----------CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhh
Q 003605 564 DEESRHISTRVMGTFGYVAPEYAMTG-----------HLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPL 632 (808)
Q Consensus 564 ~~~~~~~~~~~~Gt~~Y~APE~l~~~-----------~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~ 632 (808)
.+...-.....+||+.||+||.+... +.+.+|||||+|||||+|+.|+.||.... -.|
T Consensus 511 ~DTTsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~-------n~~---- 579 (677)
T KOG0596|consen 511 PDTTSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQII-------NQI---- 579 (677)
T ss_pred ccccceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHH-------HHH----
Confidence 66555566678999999999988643 25679999999999999999999995211 122
Q ss_pred cccccccccccCCCCCCCCCh-hhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 633 LTSREGLERIIDPSLGNDVPF-DSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 633 ~~~~~~l~~ivD~~l~~~~~~-~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
..+..|.|+.-..+++. ....+++++++.||+.||++||++.|+++.
T Consensus 580 ----aKl~aI~~P~~~Iefp~~~~~~~li~~mK~CL~rdPkkR~si~eLLqh 627 (677)
T KOG0596|consen 580 ----AKLHAITDPNHEIEFPDIPENDELIDVMKCCLARDPKKRWSIPELLQH 627 (677)
T ss_pred ----HHHHhhcCCCccccccCCCCchHHHHHHHHHHhcCcccCCCcHHHhcC
Confidence 23556777755444443 222339999999999999999999999864
No 309
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=2.2e-34 Score=300.22 Aligned_cols=244 Identities=27% Similarity=0.419 Sum_probs=195.7
Q ss_pred eeecCcEEEEEEEee-CCCEEEEEEeecccc---hhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecCCCCc
Q 003605 417 LGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQ---QGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIPNGSV 492 (808)
Q Consensus 417 LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~---~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~~GsL 492 (808)
||+|+||.||+++.. +|+.+++|.+..... ...+.+.+|++++.+++|+||+++++.+..++..+++|||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999976 589999999875332 4556889999999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccc-----
Q 003605 493 ESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEES----- 567 (808)
Q Consensus 493 ~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~----- 567 (808)
.++++.. ..+++..+++++.|+++||+|||+.+ ++|+||+|+||++++++.++|+|||++........
T Consensus 81 ~~~l~~~----~~~~~~~~~~i~~qi~~~L~~lH~~~---i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~ 153 (265)
T cd05579 81 ASLLENV----GSLDEDVARIYIAEIVLALEYLHSNG---IIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLND 153 (265)
T ss_pred HHHHHHc----CCCCHHHHHHHHHHHHHHHHHHHHcC---eecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccc
Confidence 9999632 26899999999999999999999988 99999999999999999999999999875432211
Q ss_pred -cccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCC
Q 003605 568 -RHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPS 646 (808)
Q Consensus 568 -~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~ 646 (808)
........++..|++||.+.....+.++||||||+++|||++|+.||..... ...... .... .
T Consensus 154 ~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~---~~~~~~---~~~~----------~ 217 (265)
T cd05579 154 DEKEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETP---EEIFQN---ILNG----------K 217 (265)
T ss_pred ccccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCH---HHHHHH---HhcC----------C
Confidence 1122334578899999999888899999999999999999999999964321 111111 1110 0
Q ss_pred CCCCCChh--hHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 003605 647 LGNDVPFD--SVAKVAAIASMCVQPEVQHRPFMGEVVQALK 685 (808)
Q Consensus 647 l~~~~~~~--~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le 685 (808)
+ ..+.. ....+.+++.+|++.+|++||++.+|.+.|+
T Consensus 218 ~--~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l~ 256 (265)
T cd05579 218 I--EWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIKN 256 (265)
T ss_pred c--CCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHhc
Confidence 0 01111 2467899999999999999999976666554
No 310
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=1.2e-33 Score=297.61 Aligned_cols=250 Identities=22% Similarity=0.324 Sum_probs=197.5
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc-----cchhhHHHHHHHHHHhhcccccceeEEeeeeec--cce
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV-----DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEE--QAR 480 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~-----~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~--~~~ 480 (808)
.+|++.+.||+|+||.||+|... +++.||+|.+... ..+..+.+.+|++++++++|+||+++++++.+. +..
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 47889999999999999999865 6899999987521 233456889999999999999999999998664 457
Q ss_pred EEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccc
Q 003605 481 CLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLAR 560 (808)
Q Consensus 481 ~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~ 560 (808)
++++||+++++|.+++.. ...+++...++++.|++.||+|||+.+ ++|+||||+||+++.++.++|+|||+++
T Consensus 82 ~~v~e~~~~~~L~~~~~~----~~~l~~~~~~~~~~~i~~al~~LH~~~---i~H~dl~p~ni~i~~~~~~~l~dfg~~~ 154 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKA----YGALTENVTRRYTRQILQGVSYLHSNM---IVHRDIKGANILRDSAGNVKLGDFGASK 154 (264)
T ss_pred EEEEEeCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECcccccc
Confidence 899999999999999852 235889999999999999999999988 9999999999999999999999999997
Q ss_pred ccccccc-cccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccccccc
Q 003605 561 SAMDEES-RHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGL 639 (808)
Q Consensus 561 ~~~~~~~-~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l 639 (808)
....... ....+...++..|+|||++.+..++.++|||||||++|||++|+.||..... .....
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~------------- 219 (264)
T cd06653 155 RIQTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEA--MAAIF------------- 219 (264)
T ss_pred ccccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCH--HHHHH-------------
Confidence 5432111 1111234588999999999988899999999999999999999999864211 11111
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 640 ERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 640 ~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
++.........+......+.+++.+|++ ++.+||+..++++
T Consensus 220 -~~~~~~~~~~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 220 -KIATQPTKPMLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred -HHHcCCCCCCCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 1111111122344455779999999999 4699999998865
No 311
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=9.4e-34 Score=312.72 Aligned_cols=264 Identities=23% Similarity=0.324 Sum_probs=198.8
Q ss_pred HhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc--cchhhHHHHHHHHHHhhcccccceeEEeeeeec------
Q 003605 407 ATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV--DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEE------ 477 (808)
Q Consensus 407 at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~--~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~------ 477 (808)
..++|+..+.||+|+||.||+|... +++.||||++... .....+++.+|++++.+++|+||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 4578999999999999999999865 7899999998642 334456788899999999999999999988643
Q ss_pred cceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccc
Q 003605 478 QARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFG 557 (808)
Q Consensus 478 ~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFG 557 (808)
...++||||+. ++|.+++.. .+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~------~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nil~~~~~~~kL~Dfg 163 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQM------DLDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFG 163 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhh------cCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEECCCCCEEEccCc
Confidence 34699999995 588887742 2888999999999999999999988 9999999999999999999999999
Q ss_pred cccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCc-chhH--------Hh
Q 003605 558 LARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQ-ENLV--------AW 628 (808)
Q Consensus 558 La~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~-~~lv--------~w 628 (808)
+++...... ......++..|+|||.+.+..++.++|||||||++|+|++|+.||...+.... ..+. .|
T Consensus 164 ~~~~~~~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 240 (353)
T cd07850 164 LARTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDEF 240 (353)
T ss_pred cceeCCCCC---CCCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCCHHH
Confidence 998653221 12234578899999999999999999999999999999999999964331100 0000 00
Q ss_pred h-------hhhcccc-----cccccccCCCC----CCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 629 A-------RPLLTSR-----EGLERIIDPSL----GNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 629 ~-------~~~~~~~-----~~l~~ivD~~l----~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
. ....... ..+.+++...+ ...........+.+++.+||+.||++||++.|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 241 MSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred HHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 0 0000000 00111111111 011112345678899999999999999999999865
No 312
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.7e-34 Score=336.78 Aligned_cols=268 Identities=25% Similarity=0.426 Sum_probs=214.4
Q ss_pred HHHHhCCcceeeeeeecCcEEEEEEEee----C----CCEEEEEEeecc-cchhhHHHHHHHHHHhhc-ccccceeEEee
Q 003605 404 IEKATGNFDASRILGEGGFGLVYSGVLD----D----GTKVAVKVLKRV-DQQGGREFLAEVEMLSRL-HHRNLVKLIGI 473 (808)
Q Consensus 404 l~~at~~f~~~~~LG~G~fG~VYkg~l~----d----g~~VAVK~lk~~-~~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~ 473 (808)
++...++..+.+.||+|.||.|++|.+. . ...||||.++.. .....+.+..|+++|..+ +|+||+.++|+
T Consensus 291 ~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~ 370 (609)
T KOG0200|consen 291 WEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGA 370 (609)
T ss_pred eeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheee
Confidence 3344445556679999999999999853 1 346999999853 345678899999999998 69999999999
Q ss_pred eeeccceEEEEeecCCCCccccccccc---c---C----C--CCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeeccc
Q 003605 474 CIEEQARCLVYELIPNGSVESHLHGVD---K---E----S--APLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSS 541 (808)
Q Consensus 474 ~~~~~~~~LV~Ey~~~GsL~~~L~~~~---~---~----~--~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKps 541 (808)
|..++..++|.||+..|+|.++|+..+ . . . ..|...+.+.++.|||+||+||++.. +|||||.++
T Consensus 371 ~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~---~vHRDLAaR 447 (609)
T KOG0200|consen 371 CTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVP---CVHRDLAAR 447 (609)
T ss_pred eccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCC---ccchhhhhh
Confidence 999999999999999999999998655 0 0 0 23889999999999999999999887 999999999
Q ss_pred CeeecCCCcceecccccccccccccccccc-cccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCC
Q 003605 542 NILLEHDFTPKVSDFGLARSAMDEESRHIS-TRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQP 619 (808)
Q Consensus 542 NILLd~~~~vKL~DFGLa~~~~~~~~~~~~-~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~ 619 (808)
||||.++..+||+|||+|+...+.+..... +...-...|||||.+....|+.|||||||||+||||+| |..||....
T Consensus 448 NVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~- 526 (609)
T KOG0200|consen 448 NVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIP- 526 (609)
T ss_pred hEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCC-
Confidence 999999999999999999965544433211 11113567999999999999999999999999999999 888885311
Q ss_pred CCcchhHHhhhhhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHh
Q 003605 620 PGQENLVAWARPLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLVCNE 690 (808)
Q Consensus 620 ~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~~~ 690 (808)
...++..+ +.+..+...|..+..++.+|++.||+.+|++||++.|+++.|+..+.+
T Consensus 527 -~~~~l~~~--------------l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l~~ 582 (609)
T KOG0200|consen 527 -PTEELLEF--------------LKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHLQD 582 (609)
T ss_pred -cHHHHHHH--------------HhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHHHH
Confidence 11222222 222233345666778999999999999999999999999999986554
No 313
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=1.2e-33 Score=293.17 Aligned_cols=247 Identities=28% Similarity=0.448 Sum_probs=201.9
Q ss_pred CcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccc--hhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEee
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQ--QGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~--~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
+|++.+.||+|++|.||+++.. +++.|++|.+..... ...+++.+|++++++++|+|++++++++.+.+..++++||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4778899999999999999865 678999999976443 4567899999999999999999999999998999999999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEE 566 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~ 566 (808)
+++++|.+++.. ...++|..++.++.|++.||.|||+.+ |+||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~L~~~~~~----~~~l~~~~~~~~~~~i~~~l~~lH~~~---i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 153 (254)
T cd06627 81 AENGSLRQIIKK----FGPFPESLVAVYVYQVLQGLAYLHEQG---VIHRDIKAANILTTKDGVVKLADFGVATKLNDVS 153 (254)
T ss_pred CCCCcHHHHHHh----ccCCCHHHHHHHHHHHHHHHHHHhhCC---cccCCCCHHHEEECCCCCEEEeccccceecCCCc
Confidence 999999999853 246899999999999999999999988 9999999999999999999999999998654322
Q ss_pred ccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCC
Q 003605 567 SRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPS 646 (808)
Q Consensus 567 ~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~ 646 (808)
.. .....++..|+|||.+.+..++.++|||+||+++|||++|+.|+..... ....|.. .. ..
T Consensus 154 ~~--~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~----~~~~~~~--~~--~~-------- 215 (254)
T cd06627 154 KD--DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP----MAALFRI--VQ--DD-------- 215 (254)
T ss_pred cc--ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH----HHHHHHH--hc--cC--------
Confidence 21 2234678899999999888889999999999999999999999864321 1111110 00 00
Q ss_pred CCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 647 LGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 647 l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
....+......+.+++.+||..+|++||++.|++.
T Consensus 216 -~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 216 -HPPLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred -CCCCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 01122233467889999999999999999999874
No 314
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=7.5e-34 Score=303.21 Aligned_cols=242 Identities=26% Similarity=0.353 Sum_probs=187.6
Q ss_pred eeeecCcEEEEEEEee-CCCEEEEEEeeccc---chhhHHHHHHHHHHhh---cccccceeEEeeeeeccceEEEEeecC
Q 003605 416 ILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD---QQGGREFLAEVEMLSR---LHHRNLVKLIGICIEEQARCLVYELIP 488 (808)
Q Consensus 416 ~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~---~~~~~~f~~Ei~iL~~---L~HpNIV~L~g~~~~~~~~~LV~Ey~~ 488 (808)
+||+|+||.||++... +++.+|+|.+.... ......+.+|..+++. .+|+||+.+++++..++..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999865 68999999986421 2223345555554444 369999999999999899999999999
Q ss_pred CCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccccc
Q 003605 489 NGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESR 568 (808)
Q Consensus 489 ~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~ 568 (808)
+|+|.+++.. ...++|..+..|+.|++.||+|||+.+ |+||||||+|||+++++.++|+|||++.......
T Consensus 81 ~~~L~~~i~~----~~~l~~~~~~~i~~qi~~al~~lH~~~---ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~-- 151 (279)
T cd05633 81 GGDLHYHLSQ----HGVFSEKEMRFYATEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-- 151 (279)
T ss_pred CCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---cCCCCCCHHHEEECCCCCEEEccCCcceeccccC--
Confidence 9999998852 245999999999999999999999998 9999999999999999999999999987543211
Q ss_pred ccccccccccccccchhhhc-CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCC
Q 003605 569 HISTRVMGTFGYVAPEYAMT-GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSL 647 (808)
Q Consensus 569 ~~~~~~~Gt~~Y~APE~l~~-~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l 647 (808)
.....|+..|+|||.+.+ ..++.++|||||||++|||++|+.||..........+.... . ..
T Consensus 152 --~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~---~------------~~ 214 (279)
T cd05633 152 --PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT---L------------TV 214 (279)
T ss_pred --ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHHHHHHh---h------------cC
Confidence 123458999999998874 45789999999999999999999999754322111111100 0 00
Q ss_pred CCCCChhhHHHHHHHHHHccccCCCCCC-----CHHHHHHH
Q 003605 648 GNDVPFDSVAKVAAIASMCVQPEVQHRP-----FMGEVVQA 683 (808)
Q Consensus 648 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RP-----sm~eVl~~ 683 (808)
....+......+.+++.+||+.||++|| +++|+++.
T Consensus 215 ~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 215 NVELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred CcCCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 1112333456788999999999999999 58888765
No 315
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=4.3e-34 Score=313.04 Aligned_cols=265 Identities=26% Similarity=0.360 Sum_probs=197.4
Q ss_pred HhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc-cchhhHHHHHHHHHHhhcccccceeEEeeeeec-----cc
Q 003605 407 ATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV-DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEE-----QA 479 (808)
Q Consensus 407 at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~-~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~-----~~ 479 (808)
.+++|.+.++||+|+||.||+|+.. +|+.||||+++.. ......++.+|+.++++++|+||+++++++... ..
T Consensus 3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 82 (336)
T cd07849 3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFND 82 (336)
T ss_pred cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccce
Confidence 3578999999999999999999864 7899999998743 233456788999999999999999999987654 34
Q ss_pred eEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccc
Q 003605 480 RCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLA 559 (808)
Q Consensus 480 ~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa 559 (808)
.++|+||+. ++|.+++. ...+++..++.++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 83 ~~lv~e~~~-~~l~~~~~-----~~~l~~~~~~~i~~ql~~aL~~LH~~~---ivH~dlkp~Nill~~~~~~kl~dfg~~ 153 (336)
T cd07849 83 VYIVQELME-TDLYKLIK-----TQHLSNDHIQYFLYQILRGLKYIHSAN---VLHRDLKPSNLLLNTNCDLKICDFGLA 153 (336)
T ss_pred EEEEehhcc-cCHHHHHh-----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEECCCCCEEECcccce
Confidence 799999996 47877764 235899999999999999999999998 999999999999999999999999998
Q ss_pred ccccccccc-ccccccccccccccchhhhc-CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccc--
Q 003605 560 RSAMDEESR-HISTRVMGTFGYVAPEYAMT-GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTS-- 635 (808)
Q Consensus 560 ~~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~-~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~-- 635 (808)
+........ .......|+..|+|||.+.+ ..++.++|||||||++|||++|+.||..... .....+....+..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~---~~~~~~~~~~~~~~~ 230 (336)
T cd07849 154 RIADPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDY---LHQLNLILGVLGTPS 230 (336)
T ss_pred eeccccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHHHcCCCC
Confidence 764332111 11123468899999998765 4688999999999999999999999964321 1111111111100
Q ss_pred ccccccccCCCC---------CCCCC-----hhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 636 REGLERIIDPSL---------GNDVP-----FDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 636 ~~~l~~ivD~~l---------~~~~~-----~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
.+.+..+.+... ....+ .....++.+++.+||+.+|++||++.|+++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 231 QEDLNCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred HHHHHHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 001111111000 00000 1224568899999999999999999999876
No 316
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=1.3e-33 Score=302.47 Aligned_cols=266 Identities=25% Similarity=0.306 Sum_probs=197.6
Q ss_pred HHhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc--chhhHHHHHHHHHHhhcccccceeEEeeeeecc----
Q 003605 406 KATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD--QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQ---- 478 (808)
Q Consensus 406 ~at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~--~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~---- 478 (808)
.+.++|++.+.||+|+||.||+|... +|+.||||+++... ......+.+|++++++++|+||+++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 45678999999999999999999976 68899999997532 223456788999999999999999999987654
Q ss_pred ------ceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcce
Q 003605 479 ------ARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPK 552 (808)
Q Consensus 479 ------~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vK 552 (808)
..++|+||+++ +|.+++.. ....+++..++.|+.|++.||+|||+.+ |+||||||+||++++++.+|
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~---~~~~~~~~~~~~i~~qi~~aL~~LH~~~---i~H~dl~p~nili~~~~~~k 156 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLES---GLVHFSEDHIKSFMKQLLEGLNYCHKKN---FLHRDIKCSNILLNNKGQIK 156 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhc---CCCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCcEE
Confidence 78999999975 77776642 2346899999999999999999999988 99999999999999999999
Q ss_pred ecccccccccccccccccccccccccccccchhhhc-CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhh
Q 003605 553 VSDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMT-GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARP 631 (808)
Q Consensus 553 L~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~ 631 (808)
|+|||++........ .......++..|+|||.+.+ ..++.++|||||||++|||++|+.||...... ..+......
T Consensus 157 l~dfg~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~~--~~~~~~~~~ 233 (302)
T cd07864 157 LADFGLARLYNSEES-RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQEL--AQLELISRL 233 (302)
T ss_pred eCcccccccccCCcc-cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH--HHHHHHHHH
Confidence 999999976543221 11222346778999998765 35688999999999999999999999743221 111111000
Q ss_pred hccc-ccccccc--------cC------CCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 632 LLTS-REGLERI--------ID------PSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 632 ~~~~-~~~l~~i--------vD------~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
.... ......+ .+ ..+.... ......+.+++.+||+.+|++||++.+|++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 234 CGSPCPAVWPDVIKLPYFNTMKPKKQYRRRLREEF-SFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred hCCCChhhcccccccccccccccccccccchhhhc-CCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0000 0000000 00 0000000 112467899999999999999999999875
No 317
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=2.8e-33 Score=296.69 Aligned_cols=261 Identities=24% Similarity=0.296 Sum_probs=194.6
Q ss_pred cceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc--cchhhHHHHHHHHHHhhc---ccccceeEEeeeeeccc-----
Q 003605 411 FDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV--DQQGGREFLAEVEMLSRL---HHRNLVKLIGICIEEQA----- 479 (808)
Q Consensus 411 f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~--~~~~~~~f~~Ei~iL~~L---~HpNIV~L~g~~~~~~~----- 479 (808)
|++.+.||+|+||.||+|+.. +++.||+|+++.. .......+.+|++++.++ +|+||+++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 567899999999999999986 5899999999742 222234677788887776 59999999999988776
Q ss_pred eEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccc
Q 003605 480 RCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLA 559 (808)
Q Consensus 480 ~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa 559 (808)
.+++|||+. ++|.+++.... ...++|..++.++.|+++||+|||+.+ ++|+||+++||+++.++.+||+|||++
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~--~~~l~~~~~~~~~~~i~~al~~LH~~~---i~h~~l~~~nili~~~~~~~l~dfg~~ 154 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCP--KPGLPPETIKDLMRQLLRGVDFLHSHR---IVHRDLKPQNILVTSDGQVKIADFGLA 154 (287)
T ss_pred eEEEehhcc-cCHHHHHHHcc--CCCCCHHHHHHHHHHHHHHHHHHHHCC---eeeccCChhhEEEccCCCEEEeccCcc
Confidence 899999996 58988886422 235899999999999999999999988 999999999999999999999999998
Q ss_pred cccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccc-c-
Q 003605 560 RSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSR-E- 637 (808)
Q Consensus 560 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~-~- 637 (808)
....... ......++..|+|||++.+..++.++|||||||++|||++|+.||...... +.+..+........ .
T Consensus 155 ~~~~~~~---~~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 229 (287)
T cd07838 155 RIYSFEM---ALTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSEA--DQLDKIFDVIGLPSEEE 229 (287)
T ss_pred eeccCCc---ccccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCChH--HHHHHHHHHcCCCChHh
Confidence 7653221 112334788999999999989999999999999999999999988643321 11111111000000 0
Q ss_pred -ccc-----cccCCCCC---CCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 638 -GLE-----RIIDPSLG---NDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 638 -~l~-----~ivD~~l~---~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
... ........ .....+....+.+++.+||+.||++||++.|+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 230 WPRNVSLPRSSFPSYTPRSFKSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred cCCCcccchhhcccccccchhhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 000 00000000 0011123467789999999999999999999975
No 318
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=7.7e-34 Score=304.79 Aligned_cols=252 Identities=27% Similarity=0.437 Sum_probs=194.4
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc-chhhHHHHHHHHHHhhcc-cccceeEEeeeeeccceEEEEe
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD-QQGGREFLAEVEMLSRLH-HRNLVKLIGICIEEQARCLVYE 485 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~-~~~~~~f~~Ei~iL~~L~-HpNIV~L~g~~~~~~~~~LV~E 485 (808)
++|++.+.||+|+||.||+|... +++.||||+++... .....++..|++++.+++ |+||++++++|.++...++|||
T Consensus 15 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e 94 (296)
T cd06618 15 NDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICME 94 (296)
T ss_pred chheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEee
Confidence 56788899999999999999987 48999999997532 334456778888887775 9999999999999999999999
Q ss_pred ecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCcEEeeeecccCeeecCCCcceeccccccccccc
Q 003605 486 LIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHE-DSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMD 564 (808)
Q Consensus 486 y~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~-~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~ 564 (808)
|+. ++|.+++.. ....+++..+.+++.++++||+|||+ .+ |+||||+|+||++++++.+||+|||++.....
T Consensus 95 ~~~-~~l~~l~~~---~~~~l~~~~~~~i~~~i~~~l~~lH~~~~---i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~ 167 (296)
T cd06618 95 LMS-TCLDKLLKR---IQGPIPEDILGKMTVAIVKALHYLKEKHG---VIHRDVKPSNILLDASGNVKLCDFGISGRLVD 167 (296)
T ss_pred ccC-cCHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHhhCC---EecCCCcHHHEEEcCCCCEEECccccchhccC
Confidence 985 577766642 12368999999999999999999997 45 99999999999999999999999999876533
Q ss_pred ccccccccccccccccccchhhhcCC----CccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccc
Q 003605 565 EESRHISTRVMGTFGYVAPEYAMTGH----LLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLE 640 (808)
Q Consensus 565 ~~~~~~~~~~~Gt~~Y~APE~l~~~~----~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~ 640 (808)
... .....++..|+|||++.+.. ++.++||||||+++|||++|+.||...... ...+.. ..... ..
T Consensus 168 ~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-~~~~~~----~~~~~--~~ 237 (296)
T cd06618 168 SKA---KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTE-FEVLTK----ILQEE--PP 237 (296)
T ss_pred CCc---ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhH-HHHHHH----HhcCC--CC
Confidence 221 12335778999999987554 788999999999999999999998642111 011111 11100 00
Q ss_pred cccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 003605 641 RIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQAL 684 (808)
Q Consensus 641 ~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~L 684 (808)
.+ ........++.+++.+||+.+|++||++.++++.-
T Consensus 238 -----~~--~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~~ 274 (296)
T cd06618 238 -----SL--PPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQHP 274 (296)
T ss_pred -----CC--CCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcCh
Confidence 00 00112346789999999999999999999998763
No 319
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=1.1e-33 Score=302.81 Aligned_cols=267 Identities=20% Similarity=0.275 Sum_probs=195.8
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc--chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEe
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD--QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYE 485 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~--~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~E 485 (808)
++|+..+.||+|++|.||+|... +++.||+|.++... ....+.+.+|++++++++|+||+++++++.+.+..++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 57899999999999999999975 78899999986432 2334678899999999999999999999999999999999
Q ss_pred ecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecC-CCcceeccccccccccc
Q 003605 486 LIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEH-DFTPKVSDFGLARSAMD 564 (808)
Q Consensus 486 y~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~-~~~vKL~DFGLa~~~~~ 564 (808)
|++ ++|.+++... ....+++..+..++.|++.||+|||+.+ ++||||+|+||+++. ++.+||+|||+++....
T Consensus 82 ~~~-~~l~~~~~~~--~~~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~ 155 (294)
T PLN00009 82 YLD-LDLKKHMDSS--PDFAKNPRLIKTYLYQILRGIAYCHSHR---VLHRDLKPQNLLIDRRTNALKLADFGLARAFGI 155 (294)
T ss_pred ccc-ccHHHHHHhC--CCCCcCHHHHHHHHHHHHHHHHHHHhCC---eeCCCCCcceEEEECCCCEEEEcccccccccCC
Confidence 995 5888877432 2234678888999999999999999987 999999999999985 56799999999975432
Q ss_pred ccccccccccccccccccchhhhcC-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcc-hhHHhhhhhccc-cc---c
Q 003605 565 EESRHISTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQE-NLVAWARPLLTS-RE---G 638 (808)
Q Consensus 565 ~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~-~lv~w~~~~~~~-~~---~ 638 (808)
. ....+...++..|+|||++.+. .++.++|||||||++|||+||+.||......+.. ....+....... .. .
T Consensus 156 ~--~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (294)
T PLN00009 156 P--VRTFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWPGVTS 233 (294)
T ss_pred C--ccccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcccccc
Confidence 1 1112334578899999988764 5789999999999999999999999653221100 000000000000 00 0
Q ss_pred cccccC--CCCCC----CCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 639 LERIID--PSLGN----DVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 639 l~~ivD--~~l~~----~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
+..... +.... ........++.+++.+|++.+|++||++.++++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~~ 284 (294)
T PLN00009 234 LPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALEH 284 (294)
T ss_pred chhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000 00000 0112234568899999999999999999999864
No 320
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=6.9e-34 Score=311.34 Aligned_cols=268 Identities=24% Similarity=0.313 Sum_probs=198.7
Q ss_pred HhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeec--ccchhhHHHHHHHHHHhhc-ccccceeEEeeeeec--cce
Q 003605 407 ATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKR--VDQQGGREFLAEVEMLSRL-HHRNLVKLIGICIEE--QAR 480 (808)
Q Consensus 407 at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~--~~~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~~~~~--~~~ 480 (808)
..++|++.+.||+|+||.||+|... +++.+|||++.. ........+.+|+.++.++ +|+||++++++|... ...
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 4578888999999999999999975 688999998854 2233446788899999999 999999999998654 357
Q ss_pred EEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccc
Q 003605 481 CLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLAR 560 (808)
Q Consensus 481 ~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~ 560 (808)
++||||+. ++|.+++.. . .++|..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++
T Consensus 85 ~lv~e~~~-~~L~~~~~~----~-~~~~~~~~~i~~qi~~~L~~LH~~~---i~H~dl~p~nill~~~~~~kl~d~g~~~ 155 (337)
T cd07852 85 YLVFEYME-TDLHAVIRA----N-ILEDVHKRYIMYQLLKALKYIHSGN---VIHRDLKPSNILLNSDCRVKLADFGLAR 155 (337)
T ss_pred EEEecccc-cCHHHHHhc----C-CCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEEeeccchh
Confidence 99999996 599888852 2 6889999999999999999999988 9999999999999999999999999998
Q ss_pred cccccccc---ccccccccccccccchhhhc-CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccc-
Q 003605 561 SAMDEESR---HISTRVMGTFGYVAPEYAMT-GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTS- 635 (808)
Q Consensus 561 ~~~~~~~~---~~~~~~~Gt~~Y~APE~l~~-~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~- 635 (808)
........ .......|+..|+|||++.+ ..++.++||||||+++|||+||+.||.............+.......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~ 235 (337)
T cd07852 156 SLSELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAE 235 (337)
T ss_pred ccccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHH
Confidence 65433221 12234568899999998765 45788999999999999999999999643321110000000000000
Q ss_pred ------ccccccccC----CCC--CCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 636 ------REGLERIID----PSL--GNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 636 ------~~~l~~ivD----~~l--~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
......+++ ... ...........+.+++.+|++.+|++||++.++++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~ 295 (337)
T cd07852 236 DIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEH 295 (337)
T ss_pred HHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhC
Confidence 000000111 000 000111235678999999999999999999999875
No 321
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-34 Score=314.58 Aligned_cols=243 Identities=30% Similarity=0.413 Sum_probs=199.8
Q ss_pred cceeeeeeecCcEEEEEEEee-CCCEEEEEEeec---ccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEee
Q 003605 411 FDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKR---VDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 411 f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~---~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
|...+.||.|+||.||-|+.. +.+.||||++.- ...+...+++.|+..|++|+|||+|.+.|+|..+...+|||||
T Consensus 28 f~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVMEY 107 (948)
T KOG0577|consen 28 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVMEY 107 (948)
T ss_pred HHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHHH
Confidence 556678999999999999854 788999999964 3445567899999999999999999999999999999999999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEE 566 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~ 566 (808)
| -|+-.|.|. -...+|.+.++..|..|.+.||+|||+++ .||||||+.||||.+.+.|||+|||.|......
T Consensus 108 C-lGSAsDlle---VhkKplqEvEIAAi~~gaL~gLaYLHS~~---~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA- 179 (948)
T KOG0577|consen 108 C-LGSASDLLE---VHKKPLQEVEIAAITHGALQGLAYLHSHN---RIHRDIKAGNILLSEPGLVKLADFGSASIMAPA- 179 (948)
T ss_pred H-hccHHHHHH---HHhccchHHHHHHHHHHHHHHHHHHHHhh---HHhhhccccceEecCCCeeeeccccchhhcCch-
Confidence 9 567777774 34467999999999999999999999998 999999999999999999999999998765432
Q ss_pred ccccccccccccccccchhhh---cCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccccccccccc
Q 003605 567 SRHISTRVMGTFGYVAPEYAM---TGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERII 643 (808)
Q Consensus 567 ~~~~~~~~~Gt~~Y~APE~l~---~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~iv 643 (808)
...+||+.|||||++. .+.|+-|.||||||+...||.-.+.|+.... ....+..-++ . -
T Consensus 180 -----nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMN--AMSALYHIAQ----N-------e 241 (948)
T KOG0577|consen 180 -----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMN--AMSALYHIAQ----N-------E 241 (948)
T ss_pred -----hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCch--HHHHHHHHHh----c-------C
Confidence 3457999999999885 5789999999999999999999999874321 1111111111 0 1
Q ss_pred CCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 644 DPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 644 D~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
.|.|. ..+....+.+++..||++-|.+|||..++++
T Consensus 242 sPtLq---s~eWS~~F~~Fvd~CLqKipqeRptse~ll~ 277 (948)
T KOG0577|consen 242 SPTLQ---SNEWSDYFRNFVDSCLQKIPQERPTSEELLK 277 (948)
T ss_pred CCCCC---CchhHHHHHHHHHHHHhhCcccCCcHHHHhh
Confidence 12221 3466788999999999999999999999875
No 322
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=1.6e-33 Score=304.22 Aligned_cols=267 Identities=24% Similarity=0.305 Sum_probs=196.0
Q ss_pred hCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc--chhhHHHHHHHHHHhhcccccceeEEeeeeec--cceEE
Q 003605 408 TGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD--QQGGREFLAEVEMLSRLHHRNLVKLIGICIEE--QARCL 482 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~--~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~--~~~~L 482 (808)
.++|+..+.||+|+||.||+|... +|+.||+|.++... ......+.+|++++++++|+||+++++++.+. +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 467999999999999999999975 68999999987432 22234567899999999999999999998765 46799
Q ss_pred EEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccc
Q 003605 483 VYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSA 562 (808)
Q Consensus 483 V~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~ 562 (808)
||||+. ++|.+++... ...++|.+++.++.|+++||+|||+.+ ++||||||+||++++++.+||+|||+++..
T Consensus 86 v~e~~~-~~l~~~l~~~---~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~kL~dfg~~~~~ 158 (309)
T cd07845 86 VMEYCE-QDLASLLDNM---PTPFSESQVKCLMLQLLRGLQYLHENF---IIHRDLKVSNLLLTDKGCLKIADFGLARTY 158 (309)
T ss_pred EEecCC-CCHHHHHHhc---ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECccceeeec
Confidence 999996 5888887532 246899999999999999999999998 999999999999999999999999999865
Q ss_pred ccccccccccccccccccccchhhhc-CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCc-chhHHhhh-------hhc
Q 003605 563 MDEESRHISTRVMGTFGYVAPEYAMT-GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQ-ENLVAWAR-------PLL 633 (808)
Q Consensus 563 ~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~-~~lv~w~~-------~~~ 633 (808)
.... ...+...++..|+|||.+.+ ..++.++|||||||++|||++|+.||........ ..+..+.. +..
T Consensus 159 ~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (309)
T cd07845 159 GLPA--KPMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWPGF 236 (309)
T ss_pred CCcc--CCCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhchhh
Confidence 4322 11122345788999998875 4578999999999999999999999964332111 00111100 000
Q ss_pred cccccccccc-CCCCCCCC---ChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 634 TSREGLERII-DPSLGNDV---PFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 634 ~~~~~l~~iv-D~~l~~~~---~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
.......... ........ .......+.+++.+|++.||++||++.|+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~h 290 (309)
T cd07845 237 SDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALES 290 (309)
T ss_pred hcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0000000000 00000000 01124567899999999999999999999864
No 323
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-35 Score=306.70 Aligned_cols=264 Identities=25% Similarity=0.390 Sum_probs=215.8
Q ss_pred cceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecCC
Q 003605 411 FDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIPN 489 (808)
Q Consensus 411 f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~~ 489 (808)
|++.++||+|+||.|||+.++ .|..+|||.+.. ....+++..||.|+++.+.+++|++||.|.....+++|||||..
T Consensus 35 FDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV--~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCGA 112 (502)
T KOG0574|consen 35 FDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV--DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCGA 112 (502)
T ss_pred HHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc--cchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcCC
Confidence 566789999999999999976 799999999864 34457899999999999999999999999999999999999999
Q ss_pred CCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccccc
Q 003605 490 GSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRH 569 (808)
Q Consensus 490 GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~ 569 (808)
|++.+.++. ++.+|.++++..|+...++||+|||... -||||||+.||||+.+|.+||+|||.|..+.+. -.
T Consensus 113 GSiSDI~R~---R~K~L~E~EIs~iL~~TLKGL~YLH~~~---KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDT--MA 184 (502)
T KOG0574|consen 113 GSISDIMRA---RRKPLSEQEISAVLRDTLKGLQYLHDLK---KIHRDIKAGNILLNTDGIAKLADFGVAGQLTDT--MA 184 (502)
T ss_pred CcHHHHHHH---hcCCccHHHHHHHHHHHHhHHHHHHHHH---HHHhhcccccEEEcccchhhhhhccccchhhhh--HH
Confidence 999999973 4568999999999999999999999886 799999999999999999999999999766432 22
Q ss_pred cccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCC
Q 003605 570 ISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGN 649 (808)
Q Consensus 570 ~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~ 649 (808)
....+.||+.|||||++..-.|..++||||||+...||..|+.||..-.+- +.++.. . .+|.-.-
T Consensus 185 KRNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPM---------RAIFMI----P--T~PPPTF 249 (502)
T KOG0574|consen 185 KRNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPM---------RAIFMI----P--TKPPPTF 249 (502)
T ss_pred hhCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCccccccc---------ceeEec----c--CCCCCCC
Confidence 334578999999999999999999999999999999999999999643221 111100 0 0111111
Q ss_pred CCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH-----------HHHHHHhhhhhhhcCC
Q 003605 650 DVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA-----------LKLVCNECDEAKEVGS 699 (808)
Q Consensus 650 ~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~-----------Le~i~~~~~~~~~~~~ 699 (808)
..++....++-++++.||.++|++|-|+.++++. |+.+.++..+.+..+.
T Consensus 250 ~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H~FiknA~g~~I~~~~I~~A~e~~~~~q 310 (502)
T KOG0574|consen 250 KKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEHTFIKNAPGCDIMQLMIQDAQEKAILGQ 310 (502)
T ss_pred CChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhhhhhcCCCcccHHHHHHHHHHHHHHhcc
Confidence 2356778899999999999999999999999764 4555555544444333
No 324
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-33 Score=314.87 Aligned_cols=250 Identities=26% Similarity=0.308 Sum_probs=208.1
Q ss_pred HhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccc---hhhHHHHHHHHHHhhcc-cccceeEEeeeeeccceE
Q 003605 407 ATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQ---QGGREFLAEVEMLSRLH-HRNLVKLIGICIEEQARC 481 (808)
Q Consensus 407 at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~---~~~~~f~~Ei~iL~~L~-HpNIV~L~g~~~~~~~~~ 481 (808)
..+.|++.+.||+|.||.||+++.. +|+.+|+|.+.+... ...+.+.+|+.+|+++. |+|||.+.+++.+....+
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 4567888899999999999999976 599999999976433 23468999999999998 999999999999999999
Q ss_pred EEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCC----Ccceecccc
Q 003605 482 LVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHD----FTPKVSDFG 557 (808)
Q Consensus 482 LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~----~~vKL~DFG 557 (808)
+|||++.+|.|.+.+... .+++.+...++.|++.++.|||+.+ |+||||||+|+|+... +.+|++|||
T Consensus 113 lvmEL~~GGeLfd~i~~~-----~~sE~da~~~~~~il~av~~lH~~g---vvHrDlKpEN~L~~~~~~~~~~ik~~DFG 184 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK-----HYSERDAAGIIRQILEAVKYLHSLG---VVHRDLKPENLLLASKDEGSGRIKLIDFG 184 (382)
T ss_pred EEEEecCCchHHHHHHHc-----cCCHHHHHHHHHHHHHHHHHHHhCC---ceeccCCHHHeeeccccCCCCcEEEeeCC
Confidence 999999999999999643 2899999999999999999999988 9999999999999543 479999999
Q ss_pred cccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccccc
Q 003605 558 LARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSRE 637 (808)
Q Consensus 558 La~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~ 637 (808)
++..... .......+||+.|+|||++....|+..+||||+||++|.|++|..||..........
T Consensus 185 la~~~~~---~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~------------- 248 (382)
T KOG0032|consen 185 LAKFIKP---GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIFL------------- 248 (382)
T ss_pred CceEccC---CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHHH-------------
Confidence 9987644 334456789999999999999999999999999999999999999997543221100
Q ss_pred ccccccCC--CCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 638 GLERIIDP--SLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 638 ~l~~ivD~--~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
.+... .+....-........+++..|+..||.+|+++.++++.
T Consensus 249 ---~i~~~~~~f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~H 293 (382)
T KOG0032|consen 249 ---AILRGDFDFTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQH 293 (382)
T ss_pred ---HHHcCCCCCCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhcC
Confidence 11111 11112223446788999999999999999999999883
No 325
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=2.1e-33 Score=298.27 Aligned_cols=241 Identities=24% Similarity=0.352 Sum_probs=190.1
Q ss_pred eeecCcEEEEEEEee-CCCEEEEEEeeccc---chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecCCCCc
Q 003605 417 LGEGGFGLVYSGVLD-DGTKVAVKVLKRVD---QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIPNGSV 492 (808)
Q Consensus 417 LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~---~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~~GsL 492 (808)
||+|+||+||++... +|+.||+|.+.... ....+.+.+|++++++++|+||+++++++...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 689999999999855 78999999986421 23345678899999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccccccccc
Q 003605 493 ESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRHIST 572 (808)
Q Consensus 493 ~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~~~~ 572 (808)
.+++.... ...+++.+++.++.|++.||.|||+.+ ++||||+|+||++++++.+||+|||++...... ....
T Consensus 81 ~~~l~~~~--~~~~~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~---~~~~ 152 (277)
T cd05577 81 KYHIYNVG--EPGFPEARAIFYAAQIICGLEHLHQRR---IVYRDLKPENVLLDDHGNVRISDLGLAVELKGG---KKIK 152 (277)
T ss_pred HHHHHHcC--cCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEECCCCCEEEccCcchhhhccC---Cccc
Confidence 99986432 236899999999999999999999988 999999999999999999999999998754321 1112
Q ss_pred ccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCCCCC
Q 003605 573 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGNDVP 652 (808)
Q Consensus 573 ~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~~~~ 652 (808)
...++..|++||++.++.++.++|||||||++|||++|+.||.......... ..... ... .....+
T Consensus 153 ~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~--~~~~~----------~~~--~~~~~~ 218 (277)
T cd05577 153 GRAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEKVEKE--ELKRR----------TLE--MAVEYP 218 (277)
T ss_pred cccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCcccccHH--HHHhc----------ccc--ccccCC
Confidence 3457789999999988889999999999999999999999996543211100 00000 000 011122
Q ss_pred hhhHHHHHHHHHHccccCCCCCCCHHH
Q 003605 653 FDSVAKVAAIASMCVQPEVQHRPFMGE 679 (808)
Q Consensus 653 ~~~~~~l~~Li~~Cl~~dP~~RPsm~e 679 (808)
......+.+++.+||+.+|++||+.+|
T Consensus 219 ~~~~~~~~~li~~~l~~~p~~R~~~~~ 245 (277)
T cd05577 219 DKFSPEAKDLCEALLQKDPEKRLGCRG 245 (277)
T ss_pred ccCCHHHHHHHHHHccCChhHccCCCc
Confidence 234567899999999999999994444
No 326
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=6.6e-34 Score=306.88 Aligned_cols=254 Identities=25% Similarity=0.307 Sum_probs=204.6
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc---cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEE
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV---DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVY 484 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~---~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~ 484 (808)
+.|++.+.||+|.-|+||++.+. .+..+|+|++.+. ......+...|-+||+.+.||.++.||+.+..++..||||
T Consensus 77 ~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~m 156 (459)
T KOG0610|consen 77 RHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLVM 156 (459)
T ss_pred HHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEEE
Confidence 34666789999999999999987 3588999999753 2444567788999999999999999999999999999999
Q ss_pred eecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccc
Q 003605 485 ELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMD 564 (808)
Q Consensus 485 Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~ 564 (808)
|||+||+|...++. +....++...+.-+|.+++.||+|||..| ||.|||||+||||.++|++-|+||.|+.....
T Consensus 157 eyCpGGdL~~Lrqk--Qp~~~fse~~aRFYaAEvl~ALEYLHmlG---ivYRDLKPENILvredGHIMLsDFDLS~~~~~ 231 (459)
T KOG0610|consen 157 EYCPGGDLHSLRQK--QPGKRFSESAARFYAAEVLLALEYLHMLG---IVYRDLKPENILVREDGHIMLSDFDLSLRCPV 231 (459)
T ss_pred ecCCCccHHHHHhh--CCCCccchhhHHHHHHHHHHHHHHHHhhc---eeeccCCcceeEEecCCcEEeeeccccccCCC
Confidence 99999999999874 34457899999999999999999999999 99999999999999999999999999742210
Q ss_pred ---------------------------------cccc---------------------ccccccccccccccchhhhcCC
Q 003605 565 ---------------------------------EESR---------------------HISTRVMGTFGYVAPEYAMTGH 590 (808)
Q Consensus 565 ---------------------------------~~~~---------------------~~~~~~~Gt~~Y~APE~l~~~~ 590 (808)
.... ..+...+||-.|+|||++.+.-
T Consensus 232 ~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~G 311 (459)
T KOG0610|consen 232 SPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEG 311 (459)
T ss_pred CCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCC
Confidence 0000 0011256899999999999999
Q ss_pred CccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccC
Q 003605 591 LLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPE 670 (808)
Q Consensus 591 ~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~d 670 (808)
.+.+.|.|+|||+||||+.|..||..... ++.+..++-..+.-....+.+..+.+||++.|.+|
T Consensus 312 HgsAVDWWtfGIflYEmLyG~TPFKG~~~----------------~~Tl~NIv~~~l~Fp~~~~vs~~akDLIr~LLvKd 375 (459)
T KOG0610|consen 312 HGSAVDWWTFGIFLYEMLYGTTPFKGSNN----------------KETLRNIVGQPLKFPEEPEVSSAAKDLIRKLLVKD 375 (459)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCcCCCCc----------------hhhHHHHhcCCCcCCCCCcchhHHHHHHHHHhccC
Confidence 99999999999999999999999975432 22333333333222222255678999999999999
Q ss_pred CCCCCC----HHHHHHH
Q 003605 671 VQHRPF----MGEVVQA 683 (808)
Q Consensus 671 P~~RPs----m~eVl~~ 683 (808)
|++|-. +.||.+.
T Consensus 376 P~kRlg~~rGA~eIK~H 392 (459)
T KOG0610|consen 376 PSKRLGSKRGAAEIKRH 392 (459)
T ss_pred hhhhhccccchHHhhcC
Confidence 999988 7777553
No 327
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=1.4e-33 Score=299.21 Aligned_cols=263 Identities=23% Similarity=0.300 Sum_probs=195.5
Q ss_pred cceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccc-hhhHHHHHHHHHHhhcc-cccceeEEeeeeeccceEEEEeec
Q 003605 411 FDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQ-QGGREFLAEVEMLSRLH-HRNLVKLIGICIEEQARCLVYELI 487 (808)
Q Consensus 411 f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~-~~~~~f~~Ei~iL~~L~-HpNIV~L~g~~~~~~~~~LV~Ey~ 487 (808)
|.+.+.||+|+||+||+|+.. +++.|+||+++.... .......+|+..+.+++ |+||+++++++.+++..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 567789999999999999976 578899999875322 22334567999999999 999999999999999999999999
Q ss_pred CCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccc
Q 003605 488 PNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEES 567 (808)
Q Consensus 488 ~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~ 567 (808)
+|+|.++++... ...++|.+++.++.|++.+|.|||+++ ++|+||+++||++++++.++|+|||+++......
T Consensus 81 -~~~l~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~Lh~~~---i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~- 153 (283)
T cd07830 81 -EGNLYQLMKDRK--GKPFSESVIRSIIYQILQGLAHIHKHG---FFHRDLKPENLLVSGPEVVKIADFGLAREIRSRP- 153 (283)
T ss_pred -CCCHHHHHHhcc--cccCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChhhEEEcCCCCEEEeecccceeccCCC-
Confidence 889999886422 246899999999999999999999988 9999999999999999999999999987553221
Q ss_pred cccccccccccccccchhhhc-CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcc-hhHHhhhhhc----cccccccc
Q 003605 568 RHISTRVMGTFGYVAPEYAMT-GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQE-NLVAWARPLL----TSREGLER 641 (808)
Q Consensus 568 ~~~~~~~~Gt~~Y~APE~l~~-~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~-~lv~w~~~~~----~~~~~l~~ 641 (808)
......++..|+|||++.. ..++.++||||||+++|||++|+.||......+.. ....+..... .....+..
T Consensus 154 --~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (283)
T cd07830 154 --PYTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWPEGYKLAS 231 (283)
T ss_pred --CcCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHHHHHHHHHhcCCCChhhhhhHhhhhc
Confidence 1223457889999998754 45789999999999999999999998644321110 0000000000 00000000
Q ss_pred ccCCCCC-------CCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 642 IIDPSLG-------NDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 642 ivD~~l~-------~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
.++..+. ..........+.+++.+|++.+|++||+++|++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 232 KLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred cccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 0000000 0011122467999999999999999999999875
No 328
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=1.7e-33 Score=302.14 Aligned_cols=268 Identities=23% Similarity=0.279 Sum_probs=194.3
Q ss_pred hCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc--chhhHHHHHHHHHHhhcccccceeEEeeeeecc------
Q 003605 408 TGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD--QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQ------ 478 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~--~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~------ 478 (808)
.++|++.+.||+|+||.||+|+.. +++.+|||++.... ......+.+|++++++++|+||+++++++.+..
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 578999999999999999999965 68999999986432 222346788999999999999999999875443
Q ss_pred --ceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccc
Q 003605 479 --ARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDF 556 (808)
Q Consensus 479 --~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DF 556 (808)
..++|+||+. ++|.+.++. ....+++.++..++.|+++||+|||+.+ |+||||||+|||+++++.+||+||
T Consensus 87 ~~~~~lv~~~~~-~~l~~~~~~---~~~~~~~~~~~~i~~~l~~al~~lH~~~---i~H~dl~p~nil~~~~~~~~l~df 159 (311)
T cd07866 87 RGSVYMVTPYMD-HDLSGLLEN---PSVKLTESQIKCYMLQLLEGINYLHENH---ILHRDIKAANILIDNQGILKIADF 159 (311)
T ss_pred CceEEEEEecCC-cCHHHHHhc---cccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEECCCCCEEECcC
Confidence 4599999996 467776653 2346999999999999999999999998 999999999999999999999999
Q ss_pred cccccccccccc---------ccccccccccccccchhhhcC-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchh-
Q 003605 557 GLARSAMDEESR---------HISTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENL- 625 (808)
Q Consensus 557 GLa~~~~~~~~~---------~~~~~~~Gt~~Y~APE~l~~~-~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~l- 625 (808)
|+++........ ...+...++..|+|||++.+. .++.++|||||||++|||++|+.||...........
T Consensus 160 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~~~~~~~ 239 (311)
T cd07866 160 GLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLI 239 (311)
T ss_pred ccchhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence 999754322111 111234578889999987654 578999999999999999999999864332111100
Q ss_pred HHhhhhh----cccccccccccCCCCCCCCC-------hhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 626 VAWARPL----LTSREGLERIIDPSLGNDVP-------FDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 626 v~w~~~~----~~~~~~l~~ivD~~l~~~~~-------~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
....... +.....+....+.......+ ......+.+++.+||+.+|++||++.|++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 240 FKLCGTPTEETWPGWRSLPGCEGVHSFTNYPRTLEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred HHHhCCCChhhchhhhhcccccccccCCCCCccHHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 0000000 00000000000000000000 112357889999999999999999999875
No 329
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=1.5e-33 Score=298.16 Aligned_cols=261 Identities=23% Similarity=0.269 Sum_probs=198.3
Q ss_pred cceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccc--hhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeec
Q 003605 411 FDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQ--QGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELI 487 (808)
Q Consensus 411 f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~--~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~ 487 (808)
|+..+.||+|++|.||++... +++.+++|+++.... .....+.+|++++++++|+||+++++++...+..++|+||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 456789999999999999865 788999999875322 34568889999999999999999999999999999999999
Q ss_pred CCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccc
Q 003605 488 PNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEES 567 (808)
Q Consensus 488 ~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~ 567 (808)
++ +|.+++.. ....+++.+++.++.+++.||+|||+.+ |+|+||||+||+++.++.+||+|||.+.......
T Consensus 81 ~~-~l~~~l~~---~~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~- 152 (283)
T cd05118 81 DT-DLYKLIKD---RQRGLPESLIKSYLYQLLQGLAFCHSHG---ILHRDLKPENLLINTEGVLKLADFGLARSFGSPV- 152 (283)
T ss_pred CC-CHHHHHHh---hcccCCHHHHHHHHHHHHHHHHHHHHCC---eeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc-
Confidence 64 88888853 2246899999999999999999999988 9999999999999999999999999987654332
Q ss_pred cccccccccccccccchhhhcC-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcch-hHHhhhhhcccccccccccC-
Q 003605 568 RHISTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQEN-LVAWARPLLTSREGLERIID- 644 (808)
Q Consensus 568 ~~~~~~~~Gt~~Y~APE~l~~~-~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~-lv~w~~~~~~~~~~l~~ivD- 644 (808)
.......++..|+|||.+.+. .++.++||||||+++|+|+||+.||......+... ......... .+....+.+
T Consensus 153 -~~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 229 (283)
T cd05118 153 -RPYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPD--PEVWPKFTSL 229 (283)
T ss_pred -ccccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCc--hHhcccchhh
Confidence 112234578899999998876 78999999999999999999999986433211000 000000000 000000000
Q ss_pred -----CCC-------CCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 645 -----PSL-------GNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 645 -----~~l-------~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
..+ ......+...++.+++.+||+.+|.+||++.+++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 230 ARNYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hhhhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 000 00111234568999999999999999999999975
No 330
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.7e-34 Score=324.71 Aligned_cols=244 Identities=23% Similarity=0.394 Sum_probs=192.9
Q ss_pred eeeeeecCcEEEEEEEee-CCCEEEEEEee--c--ccchhhHHHHHHHHHHhhcccccceeEEeeeeeccc--eEEEEee
Q 003605 414 SRILGEGGFGLVYSGVLD-DGTKVAVKVLK--R--VDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQA--RCLVYEL 486 (808)
Q Consensus 414 ~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk--~--~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~--~~LV~Ey 486 (808)
..+||+|+|-+||||.+. +|..||.-.++ + ......++|..|+++|+.|+|+|||+++.+|.+... ..+|+|.
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence 468999999999999875 67788755443 2 234455899999999999999999999999988765 6789999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCC-Ccceecccccccccccc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHD-FTPKVSDFGLARSAMDE 565 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~-~~vKL~DFGLa~~~~~~ 565 (808)
|..|+|..|++.. ..++...+..|+.||++||.|||++ .|+|||||||.+||||+.+ |.|||+|.|||......
T Consensus 125 ~TSGtLr~Y~kk~----~~vn~kaik~W~RQILkGL~yLHs~-~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s 199 (632)
T KOG0584|consen 125 FTSGTLREYRKKH----RRVNIKAIKSWCRQILKGLVYLHSQ-DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKS 199 (632)
T ss_pred ccCCcHHHHHHHh----ccCCHHHHHHHHHHHHHHhhhhhcC-CCCccccccccceEEEcCCcCceeecchhHHHHhhcc
Confidence 9999999999643 4578889999999999999999998 5889999999999999765 89999999999865332
Q ss_pred cccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCC
Q 003605 566 ESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDP 645 (808)
Q Consensus 566 ~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~ 645 (808)
. ...+.||+.|||||+.. ..|.+..||||||++++||+|+..||..=... ..+..-+..-+. ...+.++-
T Consensus 200 ~----aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~--AQIYKKV~SGiK-P~sl~kV~-- 269 (632)
T KOG0584|consen 200 H----AKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNP--AQIYKKVTSGIK-PAALSKVK-- 269 (632)
T ss_pred c----cceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCH--HHHHHHHHcCCC-HHHhhccC--
Confidence 2 23478999999999776 78999999999999999999999999632111 111111111000 11122222
Q ss_pred CCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 646 SLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 646 ~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
..++.+||.+|+.. .++|+++.|+++.
T Consensus 270 ----------dPevr~fIekCl~~-~~~R~sa~eLL~d 296 (632)
T KOG0584|consen 270 ----------DPEVREFIEKCLAT-KSERLSAKELLKD 296 (632)
T ss_pred ----------CHHHHHHHHHHhcC-chhccCHHHHhhC
Confidence 24688999999999 9999999999864
No 331
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=1e-33 Score=296.81 Aligned_cols=250 Identities=22% Similarity=0.359 Sum_probs=197.2
Q ss_pred CcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc-----cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEE
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV-----DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLV 483 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~-----~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV 483 (808)
+|.+.+.||+|+||.||++... .+..+++|.++.. ......++..|+.++++++|+||+++++++.+....++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 4778899999999999999865 3455666666532 223345677899999999999999999999999999999
Q ss_pred EeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccc
Q 003605 484 YELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAM 563 (808)
Q Consensus 484 ~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~ 563 (808)
|||+++++|.++++........++|.+++.++.|++.||+|||+.+ ++|+||||+||++++ +.+||+|||+++...
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~---i~h~~l~~~nili~~-~~~~l~d~g~~~~~~ 156 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRR---ILHRDLKAKNIFLKN-NLLKIGDFGVSRLLM 156 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcC---ccccCCChhheEeec-CCEeecccCceeecC
Confidence 9999999999998754444567999999999999999999999988 999999999999976 469999999987654
Q ss_pred cccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccccccccccc
Q 003605 564 DEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERII 643 (808)
Q Consensus 564 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~iv 643 (808)
... .......|+..|+|||++.+..++.++||||||+++|+|++|+.||.... ..........
T Consensus 157 ~~~--~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~------~~~~~~~~~~--------- 219 (260)
T cd08222 157 GSC--DLATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQN------FLSVVLRIVE--------- 219 (260)
T ss_pred CCc--ccccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCcc------HHHHHHHHHc---------
Confidence 322 12223457889999999988888999999999999999999999985321 1111111110
Q ss_pred CCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 644 DPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 644 D~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
......+......+.+++.+|++.+|++||++.|+++
T Consensus 220 --~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 220 --GPTPSLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred --CCCCCCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 0001122344567899999999999999999999976
No 332
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=1e-33 Score=298.41 Aligned_cols=249 Identities=27% Similarity=0.373 Sum_probs=201.9
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc---cchhhHHHHHHHHHHhhcc-cccceeEEeeeeeccceEEE
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV---DQQGGREFLAEVEMLSRLH-HRNLVKLIGICIEEQARCLV 483 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~---~~~~~~~f~~Ei~iL~~L~-HpNIV~L~g~~~~~~~~~LV 483 (808)
++|...+.||+|+||.||++... +++.||+|++... .....+.+.+|++++.+++ |+||+++++++.+.+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 47889999999999999999975 7899999998642 2344567889999999998 99999999999999999999
Q ss_pred EeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccc
Q 003605 484 YELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAM 563 (808)
Q Consensus 484 ~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~ 563 (808)
|||+++++|.+++.. ...+++.+++.|+.|++.||+|||+.+ ++|+||+|+||+++.++.++|+|||++....
T Consensus 81 ~e~~~~~~L~~~l~~----~~~l~~~~~~~i~~ql~~~l~~Lh~~~---~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~ 153 (280)
T cd05581 81 LEYAPNGELLQYIRK----YGSLDEKCTRFYAAEILLALEYLHSKG---IIHRDLKPENILLDKDMHIKITDFGTAKVLD 153 (280)
T ss_pred EcCCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCCHHHeEECCCCCEEecCCccccccC
Confidence 999999999999963 236999999999999999999999988 9999999999999999999999999987654
Q ss_pred ccccc------------------ccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchh
Q 003605 564 DEESR------------------HISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENL 625 (808)
Q Consensus 564 ~~~~~------------------~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~l 625 (808)
..... .......++..|++||.+....++.++||||||++++||++|+.||..... ...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~---~~~ 230 (280)
T cd05581 154 PNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNE---YLT 230 (280)
T ss_pred CccccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccH---HHH
Confidence 32211 111234578899999999888899999999999999999999999974431 010
Q ss_pred HHhhhhhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCH----HHHHH
Q 003605 626 VAWARPLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFM----GEVVQ 682 (808)
Q Consensus 626 v~w~~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm----~eVl~ 682 (808)
... +.+ .....+......+.+++.+||+.+|++||++ .++++
T Consensus 231 ~~~-------------~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 231 FQK-------------ILK--LEYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred HHH-------------HHh--cCCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 010 000 0111222334678999999999999999999 66654
No 333
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=1.4e-33 Score=308.75 Aligned_cols=267 Identities=22% Similarity=0.335 Sum_probs=199.8
Q ss_pred HhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc--cchhhHHHHHHHHHHhhcccccceeEEeeeee----ccc
Q 003605 407 ATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV--DQQGGREFLAEVEMLSRLHHRNLVKLIGICIE----EQA 479 (808)
Q Consensus 407 at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~--~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~----~~~ 479 (808)
..++|++.+.||+|+||.||+|... +|+.||+|++... .....+.+.+|+.++++++|+||+++++++.. ...
T Consensus 3 ~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 82 (334)
T cd07855 3 VGSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKD 82 (334)
T ss_pred hhhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCce
Confidence 3478999999999999999999865 6899999998753 22345678889999999999999999998753 346
Q ss_pred eEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccc
Q 003605 480 RCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLA 559 (808)
Q Consensus 480 ~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa 559 (808)
.++|+||+. |+|.++++. ...+++..++.++.|++.||+|||+.+ |+||||||+|||+++++.+||+|||++
T Consensus 83 ~~lv~e~~~-~~l~~~~~~----~~~~~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~Nil~~~~~~~kl~dfg~~ 154 (334)
T cd07855 83 VYVVMDLME-SDLHHIIHS----DQPLTEEHIRYFLYQLLRGLKYIHSAN---VIHRDLKPSNLLVNEDCELRIGDFGMA 154 (334)
T ss_pred EEEEEehhh-hhHHHHhcc----CCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEEcCCCcEEecccccc
Confidence 799999995 689888852 235899999999999999999999988 999999999999999999999999999
Q ss_pred ccccccccc--ccccccccccccccchhhhc-CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcc--
Q 003605 560 RSAMDEESR--HISTRVMGTFGYVAPEYAMT-GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLT-- 634 (808)
Q Consensus 560 ~~~~~~~~~--~~~~~~~Gt~~Y~APE~l~~-~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~-- 634 (808)
+........ .......++..|+|||++.+ ..++.++|||||||++|||++|+.||........ .........
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~~~---~~~~~~~~g~~ 231 (334)
T cd07855 155 RGLSSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQ---LKLILSVLGSP 231 (334)
T ss_pred eeecccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChHHH---HHHHHHHhCCC
Confidence 765332211 11123468899999998865 4678999999999999999999999965332111 111000000
Q ss_pred --------cccccccccCCC-CCCCC-----ChhhHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 003605 635 --------SREGLERIIDPS-LGNDV-----PFDSVAKVAAIASMCVQPEVQHRPFMGEVVQAL 684 (808)
Q Consensus 635 --------~~~~l~~ivD~~-l~~~~-----~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~L 684 (808)
..+.+.+.++.. ..... .......+.+++.+||+.+|++||++.++++.-
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~~~ 295 (334)
T cd07855 232 SEEVLNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQHP 295 (334)
T ss_pred hhHhhhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHhCh
Confidence 000011111100 00011 112356799999999999999999999988753
No 334
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3e-34 Score=321.56 Aligned_cols=245 Identities=27% Similarity=0.451 Sum_probs=202.6
Q ss_pred eeeecCcEEEEEEEee-CCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecCCCCccc
Q 003605 416 ILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIPNGSVES 494 (808)
Q Consensus 416 ~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~~GsL~~ 494 (808)
+||+|.||+||-|+.. +...+|||-+...+.+..+-+++||.+.++|+|+|||+++|.|.+.+..-+.||.++||+|.+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs 661 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS 661 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence 7999999999999965 556789999987777777789999999999999999999999999999999999999999999
Q ss_pred cccccccCCCCC--CHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecC-CCcceecccccccccccccccccc
Q 003605 495 HLHGVDKESAPL--GWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEH-DFTPKVSDFGLARSAMDEESRHIS 571 (808)
Q Consensus 495 ~L~~~~~~~~~L--~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~-~~~vKL~DFGLa~~~~~~~~~~~~ 571 (808)
+|+. .=.+| ++.+.-.+..||++||.|||++. |||||||-+|||++. .|.+||+|||-++.+. .....+
T Consensus 662 LLrs---kWGPlKDNEstm~fYtkQILeGLkYLHen~---IVHRDIKGDNVLvNTySGvlKISDFGTsKRLA--ginP~T 733 (1226)
T KOG4279|consen 662 LLRS---KWGPLKDNESTMNFYTKQILEGLKYLHENK---IVHRDIKGDNVLVNTYSGVLKISDFGTSKRLA--GINPCT 733 (1226)
T ss_pred HHHh---ccCCCccchhHHHHHHHHHHHHhhhhhhcc---eeeccccCCcEEEeeccceEEecccccchhhc--cCCccc
Confidence 9963 22345 67788888999999999999998 999999999999964 6899999999998664 233445
Q ss_pred cccccccccccchhhhcC--CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCC
Q 003605 572 TRVMGTFGYVAPEYAMTG--HLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGN 649 (808)
Q Consensus 572 ~~~~Gt~~Y~APE~l~~~--~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~ 649 (808)
....||..|||||++..+ .|..++|||||||.+.||.||+.||-...... .... +-++.+ ...
T Consensus 734 ETFTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~Elgspq----AAMF------kVGmyK-----vHP 798 (1226)
T KOG4279|consen 734 ETFTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQ----AAMF------KVGMYK-----VHP 798 (1226)
T ss_pred cccccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChh----Hhhh------hhccee-----cCC
Confidence 567899999999999865 57889999999999999999999996433210 0000 011111 123
Q ss_pred CCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 650 DVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 650 ~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
.+|.+...+...++.+|+..+|.+||+++++++.
T Consensus 799 ~iPeelsaeak~FilrcFepd~~~R~sA~~LL~D 832 (1226)
T KOG4279|consen 799 PIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQD 832 (1226)
T ss_pred CCcHHHHHHHHHHHHHHcCCCcccCccHHHhccC
Confidence 4677888899999999999999999999999753
No 335
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=3.4e-33 Score=298.04 Aligned_cols=255 Identities=25% Similarity=0.318 Sum_probs=199.9
Q ss_pred CcceeeeeeecCcEEEEEEEe----eCCCEEEEEEeeccc----chhhHHHHHHHHHHhhc-ccccceeEEeeeeeccce
Q 003605 410 NFDASRILGEGGFGLVYSGVL----DDGTKVAVKVLKRVD----QQGGREFLAEVEMLSRL-HHRNLVKLIGICIEEQAR 480 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l----~dg~~VAVK~lk~~~----~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~~~~~~~~ 480 (808)
+|++.+.||+|+||.||++.. .+++.||||.++... ....+.+.+|++++.++ +|+||+++++.+...+..
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 477889999999999999884 257889999997432 23345788999999999 599999999999988899
Q ss_pred EEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccc
Q 003605 481 CLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLAR 560 (808)
Q Consensus 481 ~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~ 560 (808)
++||||+++|+|.+++.. ...+.+..+..++.|+++||+|||+.+ ++||||||+||+++.++.++|+|||+++
T Consensus 81 ~lv~e~~~~~~L~~~~~~----~~~~~~~~~~~~~~ql~~~l~~lH~~~---~~H~dl~p~nil~~~~~~~~l~dfg~~~ 153 (288)
T cd05583 81 HLILDYVNGGELFTHLYQ----REHFTESEVRVYIAEIVLALDHLHQLG---IIYRDIKLENILLDSEGHVVLTDFGLSK 153 (288)
T ss_pred EEEEecCCCCcHHHHHhh----cCCcCHHHHHHHHHHHHHHHHHHHHCC---eeccCCCHHHeEECCCCCEEEEECcccc
Confidence 999999999999999852 235889999999999999999999987 9999999999999999999999999987
Q ss_pred ccccccccccccccccccccccchhhhcCC--CccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccc
Q 003605 561 SAMDEESRHISTRVMGTFGYVAPEYAMTGH--LLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREG 638 (808)
Q Consensus 561 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~--~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~ 638 (808)
....... .......|+..|+|||.+.+.. .+.++||||||+++|||++|..||...... .............
T Consensus 154 ~~~~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~--~~~~~~~~~~~~~--- 227 (288)
T cd05583 154 EFLAEEE-ERAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGEQ--NSQSEISRRILKS--- 227 (288)
T ss_pred ccccccc-cccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCccc--chHHHHHHHHHcc---
Confidence 6543221 1122345788999999987665 788999999999999999999998642211 1111111111110
Q ss_pred cccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 003605 639 LERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKL 686 (808)
Q Consensus 639 l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~ 686 (808)
+ ...+......+.+++.+||+.+|++|||++++.+.|+.
T Consensus 228 -----~----~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 228 -----K----PPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred -----C----CCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 0 11222234568899999999999999999988887764
No 336
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=1.4e-33 Score=309.31 Aligned_cols=265 Identities=23% Similarity=0.336 Sum_probs=198.1
Q ss_pred HhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc--cchhhHHHHHHHHHHhhcccccceeEEeeeeec-----c
Q 003605 407 ATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV--DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEE-----Q 478 (808)
Q Consensus 407 at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~--~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~-----~ 478 (808)
+.++|.+.+.||+|+||+||+|+.. +++.||||.++.. ......++.+|+.+++.++|+||+++++++... .
T Consensus 3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~ 82 (337)
T cd07858 3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFN 82 (337)
T ss_pred cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccC
Confidence 3467999999999999999999864 7899999998742 233455778899999999999999999988654 3
Q ss_pred ceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccc
Q 003605 479 ARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGL 558 (808)
Q Consensus 479 ~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGL 558 (808)
..++||||+. ++|.+++.. ...+++..+..++.|++.||.|||+.+ ++||||||+||+++.++.+||+|||+
T Consensus 83 ~~~lv~e~~~-~~L~~~~~~----~~~l~~~~~~~i~~qi~~aL~~LH~~~---i~H~dlkp~Nil~~~~~~~kL~Dfg~ 154 (337)
T cd07858 83 DVYIVYELMD-TDLHQIIRS----SQTLSDDHCQYFLYQLLRGLKYIHSAN---VLHRDLKPSNLLLNANCDLKICDFGL 154 (337)
T ss_pred cEEEEEeCCC-CCHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCC---EecCCCCHHHEEEcCCCCEEECcCcc
Confidence 4799999995 688888752 346899999999999999999999988 99999999999999999999999999
Q ss_pred ccccccccccccccccccccccccchhhhc-CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcc-hhHHhhhh-----
Q 003605 559 ARSAMDEESRHISTRVMGTFGYVAPEYAMT-GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQE-NLVAWARP----- 631 (808)
Q Consensus 559 a~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~-~lv~w~~~----- 631 (808)
++...... .......++..|+|||.+.. ..++.++|||||||++|||++|+.||......... .+......
T Consensus 155 ~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 232 (337)
T cd07858 155 ARTTSEKG--DFMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEED 232 (337)
T ss_pred ccccCCCc--ccccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHH
Confidence 98653321 11223457889999998865 46889999999999999999999999643211000 00000000
Q ss_pred --hccccccccccc-------CCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 632 --LLTSREGLERII-------DPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 632 --~~~~~~~l~~iv-------D~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
..... .....+ +..+. .........+.+++.+||+.+|++||+++|+++.
T Consensus 233 ~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h 291 (337)
T cd07858 233 LGFIRNE-KARRYIRSLPYTPRQSFA-RLFPHANPLAIDLLEKMLVFDPSKRITVEEALAH 291 (337)
T ss_pred hhhcCch-hhhHHHHhcCcccccCHH-HHcccCCHHHHHHHHHHhcCChhhccCHHHHHcC
Confidence 00000 000000 00000 0112345678999999999999999999999877
No 337
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=3.2e-33 Score=302.51 Aligned_cols=248 Identities=29% Similarity=0.373 Sum_probs=195.3
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc---cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEE
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV---DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVY 484 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~---~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~ 484 (808)
+.|...+.||+|+||.||+|+.. +++.+|+|.+... .....+++.+|+++++.++|+|++++++++...+..++||
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 34666788999999999999965 6788999998632 2334467889999999999999999999999999999999
Q ss_pred eecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccc
Q 003605 485 ELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMD 564 (808)
Q Consensus 485 Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~ 564 (808)
||+. |+|.+++.. ....+++.+++.++.+++.||.|||+.+ ++||||||+|||++.++.+||+|||++.....
T Consensus 95 e~~~-~~l~~~~~~---~~~~l~~~~~~~~~~~l~~~l~~LH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~ 167 (308)
T cd06634 95 EYCL-GSASDLLEV---HKKPLQEVEIAAVTHGALQGLAYLHSHN---MIHRDVKAGNILLSEPGLVKLGDFGSASIMAP 167 (308)
T ss_pred EccC-CCHHHHHHH---cCCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHhEEECCCCcEEECCcccceeecC
Confidence 9996 688877742 2345899999999999999999999988 99999999999999999999999999875432
Q ss_pred ccccccccccccccccccchhhh---cCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccccccccc
Q 003605 565 EESRHISTRVMGTFGYVAPEYAM---TGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLER 641 (808)
Q Consensus 565 ~~~~~~~~~~~Gt~~Y~APE~l~---~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ 641 (808)
. ....++..|+|||++. ...++.++|||||||++|||++|+.|+...... ..+..+... ..
T Consensus 168 ~------~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~--~~~~~~~~~------~~-- 231 (308)
T cd06634 168 A------NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--SALYHIAQN------ES-- 231 (308)
T ss_pred c------ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHH--HHHHHHhhc------CC--
Confidence 1 2345788999999975 356788999999999999999999998532210 111111100 00
Q ss_pred ccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 003605 642 IIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALK 685 (808)
Q Consensus 642 ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le 685 (808)
+.. ........+.+++.+||+.+|++||++.+|++...
T Consensus 232 ---~~~---~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~~ 269 (308)
T cd06634 232 ---PAL---QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRF 269 (308)
T ss_pred ---CCc---CcccccHHHHHHHHHHhhCCcccCCCHHHHhhCcc
Confidence 000 11234467889999999999999999999987643
No 338
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=2e-33 Score=294.65 Aligned_cols=244 Identities=25% Similarity=0.327 Sum_probs=188.8
Q ss_pred eeeeecCcEEEEEEEee-CCCEEEEEEeeccc---chhhHHHHHHHHHHh-hcccccceeEEeeeeeccceEEEEeecCC
Q 003605 415 RILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD---QQGGREFLAEVEMLS-RLHHRNLVKLIGICIEEQARCLVYELIPN 489 (808)
Q Consensus 415 ~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~---~~~~~~f~~Ei~iL~-~L~HpNIV~L~g~~~~~~~~~LV~Ey~~~ 489 (808)
+.||+|+||.||+|... +++.||||+++... ......+..|..++. ..+|+|++++++++...+..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 56999999999999864 68999999986532 222334555655544 45899999999999999999999999999
Q ss_pred CCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccccc
Q 003605 490 GSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRH 569 (808)
Q Consensus 490 GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~ 569 (808)
++|.++++. ...+++..+.+++.|++.||.|||+.+ ++||||+|+||++++++.+||+|||+++....
T Consensus 82 ~~L~~~l~~----~~~~~~~~~~~i~~qi~~aL~~lH~~~---i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~----- 149 (260)
T cd05611 82 GDCASLIKT----LGGLPEDWAKQYIAEVVLGVEDLHQRG---IIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE----- 149 (260)
T ss_pred CCHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCcEEEeecccceeccc-----
Confidence 999999853 235889999999999999999999988 99999999999999999999999999875432
Q ss_pred cccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCC
Q 003605 570 ISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGN 649 (808)
Q Consensus 570 ~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~ 649 (808)
.....++..|+|||.+.+..++.++||||||+++|||++|..||..... ... + ....... . ....
T Consensus 150 -~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~--~-~~~~~~~------~--~~~~ 214 (260)
T cd05611 150 -NKKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETP---DAV--F-DNILSRR------I--NWPE 214 (260)
T ss_pred -cccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCH---HHH--H-HHHHhcc------c--CCCC
Confidence 2234578899999999888889999999999999999999999964321 111 1 1000000 0 0001
Q ss_pred CCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHH
Q 003605 650 DVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALK 685 (808)
Q Consensus 650 ~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le 685 (808)
.........+.+++.+||+.+|++||++.++.+.|.
T Consensus 215 ~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l~ 250 (260)
T cd05611 215 EVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIKS 250 (260)
T ss_pred cccccCCHHHHHHHHHHccCCHHHccCCCcHHHHHc
Confidence 111133467899999999999999998776655443
No 339
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=2.3e-33 Score=301.94 Aligned_cols=244 Identities=25% Similarity=0.377 Sum_probs=196.6
Q ss_pred eeeeecCcEEEEEEEee-CCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecCCCCcc
Q 003605 415 RILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIPNGSVE 493 (808)
Q Consensus 415 ~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~~GsL~ 493 (808)
.+||+|+||.||++... +++.||||++........+.+.+|+.++++++|+||+++++++...+..++||||+++++|.
T Consensus 26 ~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L~ 105 (292)
T cd06657 26 IKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALT 105 (292)
T ss_pred HHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcHH
Confidence 57999999999999875 78999999987555556678999999999999999999999999999999999999999999
Q ss_pred ccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccccccccc
Q 003605 494 SHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRHISTR 573 (808)
Q Consensus 494 ~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~~~~~ 573 (808)
+++.. ..+++...+.++.|++.||+|||+.+ ++||||+|+||++++++.++|+|||++........ ....
T Consensus 106 ~~~~~-----~~~~~~~~~~~~~ql~~~l~~lH~~g---ivH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~--~~~~ 175 (292)
T cd06657 106 DIVTH-----TRMNEEQIAAVCLAVLKALSVLHAQG---VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--RRKS 175 (292)
T ss_pred HHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHEEECCCCCEEEcccccceecccccc--cccc
Confidence 98742 25899999999999999999999988 99999999999999999999999999875433211 1223
Q ss_pred cccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCCCCCh
Q 003605 574 VMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGNDVPF 653 (808)
Q Consensus 574 ~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~~~~~ 653 (808)
..++..|++||++.+..++.++|||||||++|||++|..||..... ......... .....+.. ..
T Consensus 176 ~~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~---~~~~~~~~~----------~~~~~~~~--~~ 240 (292)
T cd06657 176 LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP---LKAMKMIRD----------NLPPKLKN--LH 240 (292)
T ss_pred cccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH---HHHHHHHHh----------hCCcccCC--cc
Confidence 4578999999999888889999999999999999999999864221 111111110 01111100 11
Q ss_pred hhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 654 DSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 654 ~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
.....+.+++.+||+.+|.+||++.+|++.
T Consensus 241 ~~~~~l~~li~~~l~~~P~~R~~~~~ll~~ 270 (292)
T cd06657 241 KVSPSLKGFLDRLLVRDPAQRATAAELLKH 270 (292)
T ss_pred cCCHHHHHHHHHHHhCCcccCcCHHHHhcC
Confidence 223567889999999999999999999773
No 340
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=3.9e-33 Score=300.19 Aligned_cols=259 Identities=16% Similarity=0.216 Sum_probs=183.3
Q ss_pred hCCcceeeeeeecCcEEEEEEEeeC----CCEEEEEEeecccchh-----------hHHHHHHHHHHhhcccccceeEEe
Q 003605 408 TGNFDASRILGEGGFGLVYSGVLDD----GTKVAVKVLKRVDQQG-----------GREFLAEVEMLSRLHHRNLVKLIG 472 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l~d----g~~VAVK~lk~~~~~~-----------~~~f~~Ei~iL~~L~HpNIV~L~g 472 (808)
.++|.+.++||+|+||+||+|...+ +..+|+|......... ......++..+..+.|+|++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 4689999999999999999999754 3456666543221111 011223334455678999999999
Q ss_pred eeeecc----ceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCC
Q 003605 473 ICIEEQ----ARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHD 548 (808)
Q Consensus 473 ~~~~~~----~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~ 548 (808)
++.... ..++++|++. .++.+.+.. ....++..+..|+.|+++||+|||+.+ |+||||||+|||++.+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~----~~~~~~~~~~~i~~qi~~~l~~lH~~~---iiHrDiKp~Nill~~~ 162 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKLV-ENTKEIFKR----IKCKNKKLIKNIMKDMLTTLEYIHEHG---ISHGDIKPENIMVDGN 162 (294)
T ss_pred eeeEecCCceEEEEEEehhc-cCHHHHHHh----hccCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCC
Confidence 876543 2367777763 355555532 223578889999999999999999988 9999999999999999
Q ss_pred Ccceeccccccccccccccc-----ccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcc
Q 003605 549 FTPKVSDFGLARSAMDEESR-----HISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQE 623 (808)
Q Consensus 549 ~~vKL~DFGLa~~~~~~~~~-----~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~ 623 (808)
+.++|+|||+|+........ .......||..|+|||++.+..++.++|||||||+||||++|+.||.......
T Consensus 163 ~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~-- 240 (294)
T PHA02882 163 NRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNG-- 240 (294)
T ss_pred CcEEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccch--
Confidence 99999999999865432111 11123469999999999999999999999999999999999999997543211
Q ss_pred hhHHhhhhhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 003605 624 NLVAWARPLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQAL 684 (808)
Q Consensus 624 ~lv~w~~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~L 684 (808)
.+..-... +.+..+....+ ........+.+++..|+..+|++||++.++++.|
T Consensus 241 ~~~~~~~~-----~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 241 NLIHAAKC-----DFIKRLHEGKI---KIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred HHHHHhHH-----HHHHHhhhhhh---ccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 11111100 00111111111 0112346789999999999999999999998876
No 341
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=5.5e-33 Score=296.09 Aligned_cols=241 Identities=26% Similarity=0.348 Sum_probs=186.8
Q ss_pred eeeecCcEEEEEEEee-CCCEEEEEEeeccc---chhhHHHHHHHHHHh---hcccccceeEEeeeeeccceEEEEeecC
Q 003605 416 ILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD---QQGGREFLAEVEMLS---RLHHRNLVKLIGICIEEQARCLVYELIP 488 (808)
Q Consensus 416 ~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~---~~~~~~f~~Ei~iL~---~L~HpNIV~L~g~~~~~~~~~LV~Ey~~ 488 (808)
+||+|+||.||++... +++.||+|.+.... ......+..|..++. ...|+||+.+++++.+.+..++||||+.
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999865 68899999986421 222233455544443 4579999999999999999999999999
Q ss_pred CCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccccc
Q 003605 489 NGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESR 568 (808)
Q Consensus 489 ~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~ 568 (808)
+|+|.+++.. ...++|.++..|+.|+++||+|||+.+ |+||||||+||+++.++.+||+|||+++......
T Consensus 81 g~~L~~~l~~----~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~-- 151 (278)
T cd05606 81 GGDLHYHLSQ----HGVFSEAEMRFYAAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKK-- 151 (278)
T ss_pred CCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---EEcCCCCHHHEEECCCCCEEEccCcCccccCccC--
Confidence 9999998852 346999999999999999999999988 9999999999999999999999999987543221
Q ss_pred ccccccccccccccchhhhcC-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCC
Q 003605 569 HISTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSL 647 (808)
Q Consensus 569 ~~~~~~~Gt~~Y~APE~l~~~-~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l 647 (808)
.....|+..|+|||++.++ .++.++|||||||++|||++|+.||........... ... .. ..+
T Consensus 152 --~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~-~~~--~~--------~~~--- 215 (278)
T cd05606 152 --PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI-DRM--TL--------TMA--- 215 (278)
T ss_pred --CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHH-HHH--hh--------ccC---
Confidence 1234688999999998755 589999999999999999999999975432111110 000 00 001
Q ss_pred CCCCChhhHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 003605 648 GNDVPFDSVAKVAAIASMCVQPEVQHRP-----FMGEVVQ 682 (808)
Q Consensus 648 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RP-----sm~eVl~ 682 (808)
...+......+.+++.+|+..+|++|| ++.++++
T Consensus 216 -~~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 216 -VELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred -CCCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 112223356899999999999999999 8999875
No 342
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1.7e-33 Score=326.31 Aligned_cols=271 Identities=21% Similarity=0.226 Sum_probs=189.8
Q ss_pred HhCCcceeeeeeecCcEEEEEEEeeC--CCEEEEE------------------EeecccchhhHHHHHHHHHHhhccccc
Q 003605 407 ATGNFDASRILGEGGFGLVYSGVLDD--GTKVAVK------------------VLKRVDQQGGREFLAEVEMLSRLHHRN 466 (808)
Q Consensus 407 at~~f~~~~~LG~G~fG~VYkg~l~d--g~~VAVK------------------~lk~~~~~~~~~f~~Ei~iL~~L~HpN 466 (808)
..++|++.+.||+|+||+||++.++. +...++| .++ .......++.+|+++|++++|+|
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~-~~~~~~~~~~~Ei~il~~l~Hpn 224 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVK-AGSRAAIQLENEILALGRLNHEN 224 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhh-cchHHHHHHHHHHHHHHhCCCCC
Confidence 45789999999999999999987642 2222222 111 12233457889999999999999
Q ss_pred ceeEEeeeeeccceEEEEeecCCCCcccccccccc-CCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeee
Q 003605 467 LVKLIGICIEEQARCLVYELIPNGSVESHLHGVDK-ESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILL 545 (808)
Q Consensus 467 IV~L~g~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~-~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILL 545 (808)
|+++++++...+..++|+|++. ++|.+++..... ........+...|+.|++.||+|||+++ |+||||||+||||
T Consensus 225 Iv~l~~~~~~~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~g---IiHrDLKP~NILl 300 (501)
T PHA03210 225 ILKIEEILRSEANTYMITQKYD-FDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKK---LIHRDIKLENIFL 300 (501)
T ss_pred cCcEeEEEEECCeeEEEEeccc-cCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEE
Confidence 9999999999999999999984 577777643211 1122345667789999999999999988 9999999999999
Q ss_pred cCCCcceecccccccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCC-CCCCCCCCcch
Q 003605 546 EHDFTPKVSDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKP-VDMTQPPGQEN 624 (808)
Q Consensus 546 d~~~~vKL~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P-~~~~~~~~~~~ 624 (808)
+.++.+||+|||+++...... ........||..|+|||++.+..++.++|||||||+||||++|..+ +..........
T Consensus 301 ~~~~~vkL~DFGla~~~~~~~-~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~ 379 (501)
T PHA03210 301 NCDGKIVLGDFGTAMPFEKER-EAFDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQ 379 (501)
T ss_pred CCCCCEEEEeCCCceecCccc-ccccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHH
Confidence 999999999999998654322 1222345799999999999999999999999999999999998754 43322211122
Q ss_pred hHHhhhhhccccc-------ccccccCCC-CC---CCC-----ChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 625 LVAWARPLLTSRE-------GLERIIDPS-LG---NDV-----PFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 625 lv~w~~~~~~~~~-------~l~~ivD~~-l~---~~~-----~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
+......+....+ .+...++.. +. ... .......+.+++.+||+.||++||++.|+++.
T Consensus 380 ~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~h 454 (501)
T PHA03210 380 LLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLAL 454 (501)
T ss_pred HHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhhC
Confidence 2211111000000 000001000 00 000 00122457788999999999999999999864
No 343
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=3.5e-33 Score=307.07 Aligned_cols=264 Identities=24% Similarity=0.350 Sum_probs=194.3
Q ss_pred hCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc--cchhhHHHHHHHHHHhhcccccceeEEeeeeec------c
Q 003605 408 TGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV--DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEE------Q 478 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~--~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~------~ 478 (808)
.++|...+.||+|+||.||+|+.. +|+.||||+++.. .......+.+|++++++++|+||+++++++... .
T Consensus 14 ~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~~ 93 (342)
T cd07879 14 PERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEFQ 93 (342)
T ss_pred ccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCCc
Confidence 488999999999999999999964 7899999998742 223345688999999999999999999998654 2
Q ss_pred ceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccc
Q 003605 479 ARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGL 558 (808)
Q Consensus 479 ~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGL 558 (808)
..++|+||+. .+|.+++. ..+++..+..++.|+++||+|||+.+ |+||||||+|||++.++.+||+|||+
T Consensus 94 ~~~lv~e~~~-~~l~~~~~------~~~~~~~~~~~~~qi~~aL~~LH~~~---i~H~dlkp~NIll~~~~~~kL~dfg~ 163 (342)
T cd07879 94 DFYLVMPYMQ-TDLQKIMG------HPLSEDKVQYLVYQMLCGLKYIHSAG---IIHRDLKPGNLAVNEDCELKILDFGL 163 (342)
T ss_pred eEEEEecccc-cCHHHHHc------CCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCCHHHEEECCCCCEEEeeCCC
Confidence 4699999996 46665542 35889999999999999999999988 99999999999999999999999999
Q ss_pred ccccccccccccccccccccccccchhhhc-CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhh------
Q 003605 559 ARSAMDEESRHISTRVMGTFGYVAPEYAMT-GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARP------ 631 (808)
Q Consensus 559 a~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~------ 631 (808)
++..... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||.............+...
T Consensus 164 ~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~ 238 (342)
T cd07879 164 ARHADAE-----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGPEF 238 (342)
T ss_pred CcCCCCC-----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHHH
Confidence 8754221 123457889999999876 4688999999999999999999999975321110000000000
Q ss_pred --hcccccccccccC--CCC-CCCC---ChhhHHHHHHHHHHccccCCCCCCCHHHHHHH--HHHH
Q 003605 632 --LLTSREGLERIID--PSL-GNDV---PFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA--LKLV 687 (808)
Q Consensus 632 --~~~~~~~l~~ivD--~~l-~~~~---~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~--Le~i 687 (808)
.... ......++ +.. .... .......+.+++.+||+.||++||++.|+++. ++..
T Consensus 239 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~ 303 (342)
T cd07879 239 VQKLED-KAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSF 303 (342)
T ss_pred HHHhcc-cchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhc
Confidence 0000 00000000 000 0000 01233568899999999999999999999864 5544
No 344
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=4e-33 Score=304.42 Aligned_cols=262 Identities=21% Similarity=0.278 Sum_probs=193.4
Q ss_pred eeeeec--CcEEEEEEEee-CCCEEEEEEeecc--cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecCC
Q 003605 415 RILGEG--GFGLVYSGVLD-DGTKVAVKVLKRV--DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIPN 489 (808)
Q Consensus 415 ~~LG~G--~fG~VYkg~l~-dg~~VAVK~lk~~--~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~~ 489 (808)
..||+| +||+||++... +|+.||||+++.. .....+.+.+|+.+++.++|+||++++++|..++..++|+||+.+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 356666 89999999864 7899999998742 233456788999999999999999999999999999999999999
Q ss_pred CCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccccc
Q 003605 490 GSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRH 569 (808)
Q Consensus 490 GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~ 569 (808)
|+|.+++.... ...+++..+..++.|++.||+|||+.+ |+||||||+|||++.++.++++||+.+..........
T Consensus 84 ~~l~~~l~~~~--~~~~~~~~~~~~~~qi~~aL~~lH~~~---ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~ 158 (328)
T cd08226 84 GSANSLLKTYF--PEGMSEALIGNILFGALRGLNYLHQNG---YIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKA 158 (328)
T ss_pred CCHHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccc
Confidence 99999986432 235889999999999999999999988 9999999999999999999999998654322211100
Q ss_pred -----cccccccccccccchhhhcC--CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhh---------hc
Q 003605 570 -----ISTRVMGTFGYVAPEYAMTG--HLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARP---------LL 633 (808)
Q Consensus 570 -----~~~~~~Gt~~Y~APE~l~~~--~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~---------~~ 633 (808)
......++..|+|||++.+. .++.++|||||||++|||++|+.||...... ..+...... ..
T Consensus 159 ~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 236 (328)
T cd08226 159 KVVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRT--QMLLQKLKGPPYSPLDITTF 236 (328)
T ss_pred cccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChH--HHHHHHhcCCCCCCcccccc
Confidence 00112345679999998764 4789999999999999999999999653211 111110000 00
Q ss_pred cc----------------------ccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 634 TS----------------------REGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 634 ~~----------------------~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
.. ......+.+..+...........+.+++.+||+.||++|||+.|+++.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~~ 308 (328)
T cd08226 237 PCEESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLSH 308 (328)
T ss_pred chhhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 00 000001111112222233456789999999999999999999999865
No 345
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=7.1e-33 Score=295.82 Aligned_cols=251 Identities=25% Similarity=0.338 Sum_probs=196.2
Q ss_pred CcceeeeeeecCcEEEEEEEe----eCCCEEEEEEeeccc----chhhHHHHHHHHHHhhc-ccccceeEEeeeeeccce
Q 003605 410 NFDASRILGEGGFGLVYSGVL----DDGTKVAVKVLKRVD----QQGGREFLAEVEMLSRL-HHRNLVKLIGICIEEQAR 480 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l----~dg~~VAVK~lk~~~----~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~~~~~~~~ 480 (808)
+|++.+.||+|+||.||++.. .+|+.||+|+++... ....+++.+|++++.++ +|+||+++++++..+...
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 477889999999999999985 368899999997532 22346788999999999 599999999999988889
Q ss_pred EEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccc
Q 003605 481 CLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLAR 560 (808)
Q Consensus 481 ~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~ 560 (808)
++||||+++++|.+++.. ...+.+..+..++.|+++||+|||+.+ ++||||+|+|||+++++.+||+|||+++
T Consensus 81 ~lv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~al~~lH~~~---i~H~dl~p~nil~~~~~~~kl~dfg~~~ 153 (290)
T cd05613 81 HLILDYINGGELFTHLSQ----RERFKEQEVQIYSGEIVLALEHLHKLG---IIYRDIKLENILLDSNGHVVLTDFGLSK 153 (290)
T ss_pred EEEEecCCCCcHHHHHHH----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeEECCCCCEEEeeCccce
Confidence 999999999999999853 245889999999999999999999988 9999999999999999999999999997
Q ss_pred ccccccccccccccccccccccchhhhcC--CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccc
Q 003605 561 SAMDEESRHISTRVMGTFGYVAPEYAMTG--HLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREG 638 (808)
Q Consensus 561 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~--~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~ 638 (808)
........ ......|+..|+|||++... .++.++||||||+++|||++|+.||...... .....+.......
T Consensus 154 ~~~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~--~~~~~~~~~~~~~--- 227 (290)
T cd05613 154 EFHEDEVE-RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGEK--NSQAEISRRILKS--- 227 (290)
T ss_pred eccccccc-ccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCcc--ccHHHHHHHhhcc---
Confidence 65332211 11234588899999998753 4678999999999999999999998643221 1111121111110
Q ss_pred cccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCC-----CHHHHHH
Q 003605 639 LERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRP-----FMGEVVQ 682 (808)
Q Consensus 639 l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RP-----sm~eVl~ 682 (808)
...++......+.+++.+|++.+|++|| +..++++
T Consensus 228 ---------~~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 228 ---------EPPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred ---------CCCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 0112233446788999999999999997 5666644
No 346
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=5.5e-33 Score=300.07 Aligned_cols=262 Identities=21% Similarity=0.249 Sum_probs=193.3
Q ss_pred eeeeeecCcEEEEEEEeeCCCEEEEEEeecc--cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecCCCC
Q 003605 414 SRILGEGGFGLVYSGVLDDGTKVAVKVLKRV--DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIPNGS 491 (808)
Q Consensus 414 ~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~--~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~~Gs 491 (808)
.+.+|.|+++.||++.. +++.||||+++.. .....+.+.+|++++++++|+||+++++++.+.+..+++|||+++|+
T Consensus 7 ~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~~ 85 (314)
T cd08216 7 GKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYGS 85 (314)
T ss_pred hHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCCC
Confidence 34455566666666655 6899999998753 44556789999999999999999999999999999999999999999
Q ss_pred ccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccc----
Q 003605 492 VESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEES---- 567 (808)
Q Consensus 492 L~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~---- 567 (808)
|.++++... ...+++.....++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||.+........
T Consensus 86 l~~~l~~~~--~~~~~~~~~~~~~~~l~~~L~~LH~~~---ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~ 160 (314)
T cd08216 86 CEDLLKTHF--PEGLPELAIAFILKDVLNALDYIHSKG---FIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRV 160 (314)
T ss_pred HHHHHHHhc--ccCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCcceEEEecCCceEEecCccceeeccccccccc
Confidence 999997432 235888999999999999999999998 99999999999999999999999999865432211
Q ss_pred -cccccccccccccccchhhhc--CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhh----hccc-----
Q 003605 568 -RHISTRVMGTFGYVAPEYAMT--GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARP----LLTS----- 635 (808)
Q Consensus 568 -~~~~~~~~Gt~~Y~APE~l~~--~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~----~~~~----- 635 (808)
........++..|+|||++.. ..++.++|||||||++|||++|+.||...... ..+...... .+..
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 238 (314)
T cd08216 161 VHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPAT--QMLLEKVRGTVPCLLDKSTYPL 238 (314)
T ss_pred cccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhccCccccccCchhh
Confidence 111123456788999999876 35788999999999999999999999753221 111111000 0000
Q ss_pred -cccccc----ccCCCC----CCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 636 -REGLER----IIDPSL----GNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 636 -~~~l~~----ivD~~l----~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
...... ..++.. ...........+.+++.+||+.||++||++.|+++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 239 YEDSMSQSRSSNEHPNNRDSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred hcCCcCcccccccccchhhhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 000000 001110 011122344678899999999999999999999875
No 347
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=8.5e-33 Score=300.17 Aligned_cols=244 Identities=29% Similarity=0.415 Sum_probs=192.3
Q ss_pred cceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc---cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEee
Q 003605 411 FDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV---DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 411 f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~---~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
|...+.||+|+||+||+|+.. +++.|++|++... .....+++.+|++++++++|+|++++++++.+.+..++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 555678999999999999864 6889999998642 223345788999999999999999999999999999999999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEE 566 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~ 566 (808)
+. |+|.+++.. ....++|.+++.++.|++.||+|||+.+ ++||||+|+||+++.++.+||+|||++.....
T Consensus 103 ~~-~~l~~~l~~---~~~~l~~~~~~~~~~qi~~al~~LH~~g---i~H~dl~p~nili~~~~~~kL~dfg~~~~~~~-- 173 (313)
T cd06633 103 CL-GSASDLLEV---HKKPLQEVEIAAITHGALQGLAYLHSHN---MIHRDIKAGNILLTEPGQVKLADFGSASKSSP-- 173 (313)
T ss_pred CC-CCHHHHHHh---cCCCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCChhhEEECCCCCEEEeecCCCcccCC--
Confidence 95 678777742 2346899999999999999999999988 99999999999999999999999999864321
Q ss_pred ccccccccccccccccchhhh---cCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccccccccccc
Q 003605 567 SRHISTRVMGTFGYVAPEYAM---TGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERII 643 (808)
Q Consensus 567 ~~~~~~~~~Gt~~Y~APE~l~---~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~iv 643 (808)
.....|+..|+|||++. ...++.++|||||||++|||++|..|+...... ....+. .. ...
T Consensus 174 ----~~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~---~~~~~~---~~--~~~---- 237 (313)
T cd06633 174 ----ANSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM---SALYHI---AQ--NDS---- 237 (313)
T ss_pred ----CCCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChH---HHHHHH---Hh--cCC----
Confidence 12346788999999974 456888999999999999999999998643211 111110 00 000
Q ss_pred CCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 644 DPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 644 D~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
+.. ........+.+++.+||+.+|++||++.++++.
T Consensus 238 -~~~---~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 238 -PTL---QSNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred -CCC---CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000 111223468899999999999999999999864
No 348
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=1.3e-32 Score=291.89 Aligned_cols=249 Identities=20% Similarity=0.253 Sum_probs=192.0
Q ss_pred HHHHHHhCCcceeeee--eecCcEEEEEEEee-CCCEEEEEEeecccchhhHHHHHHHHHHhhc-ccccceeEEeeeeec
Q 003605 402 SEIEKATGNFDASRIL--GEGGFGLVYSGVLD-DGTKVAVKVLKRVDQQGGREFLAEVEMLSRL-HHRNLVKLIGICIEE 477 (808)
Q Consensus 402 ~el~~at~~f~~~~~L--G~G~fG~VYkg~l~-dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~~~~~ 477 (808)
.++....++|++.+.+ |+|+||.||++... ++..+|+|.++..... + .|+.....+ +|+||+++++++...
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~---~--~e~~~~~~~~~h~~iv~~~~~~~~~ 81 (267)
T PHA03390 7 SELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFN---A--IEPMVHQLMKDNPNFIKLYYSVTTL 81 (267)
T ss_pred HHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcc---h--hhHHHHHHhhcCCCEEEEEEEEecC
Confidence 3444455677777766 99999999999864 6888999998643211 1 122222222 699999999999999
Q ss_pred cceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCC-cceeccc
Q 003605 478 QARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDF-TPKVSDF 556 (808)
Q Consensus 478 ~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~-~vKL~DF 556 (808)
+..++||||+++++|.++++. ...++|.+++.++.|+++||+|||+.+ ++||||||+||+++.++ .++|+||
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lH~~~---i~H~dl~p~nil~~~~~~~~~l~df 154 (267)
T PHA03390 82 KGHVLIMDYIKDGDLFDLLKK----EGKLSEAEVKKIIRQLVEALNDLHKHN---IIHNDIKLENVLYDRAKDRIYLCDY 154 (267)
T ss_pred CeeEEEEEcCCCCcHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eeeCCCCHHHEEEeCCCCeEEEecC
Confidence 999999999999999999963 237999999999999999999999988 99999999999999988 9999999
Q ss_pred ccccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccc
Q 003605 557 GLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSR 636 (808)
Q Consensus 557 GLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~ 636 (808)
|+++..... ....++..|+|||++.+..++.++|||||||++|||++|+.||...... ..+...|.... .
T Consensus 155 g~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~-~-- 224 (267)
T PHA03390 155 GLCKIIGTP------SCYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDE-ELDLESLLKRQ-Q-- 224 (267)
T ss_pred ccceecCCC------ccCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcc-hhhHHHHHHhh-c--
Confidence 998754321 1235788999999999889999999999999999999999999743221 11222222211 0
Q ss_pred cccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCC-HHHHHH
Q 003605 637 EGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPF-MGEVVQ 682 (808)
Q Consensus 637 ~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs-m~eVl~ 682 (808)
.. ..........+.+++.+||+.+|++||+ ++|+++
T Consensus 225 --------~~--~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 225 --------KK--LPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred --------cc--CCcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 00 0111134467899999999999999995 688864
No 349
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-34 Score=320.47 Aligned_cols=249 Identities=25% Similarity=0.398 Sum_probs=201.5
Q ss_pred cceeeeeeecCcEEEEEEEeeC-CCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecCC
Q 003605 411 FDASRILGEGGFGLVYSGVLDD-GTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIPN 489 (808)
Q Consensus 411 f~~~~~LG~G~fG~VYkg~l~d-g~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~~ 489 (808)
|++...||.|+||+||||+.++ +-..|-|.+........++|+-||+||..+.||+||+|++.|+.++.++++.|||.|
T Consensus 34 WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC~G 113 (1187)
T KOG0579|consen 34 WEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFCGG 113 (1187)
T ss_pred HHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeecCC
Confidence 4455679999999999999774 344577888777788889999999999999999999999999999999999999999
Q ss_pred CCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccccc
Q 003605 490 GSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRH 569 (808)
Q Consensus 490 GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~ 569 (808)
|-++..+-. -+..|.+.++.-++.+++.||.|||+++ |||||||+.|||++-+|.++|+|||.+.... ....
T Consensus 114 GAVDaimlE---L~r~LtE~QIqvvc~q~ldALn~LHs~~---iIHRDLKAGNiL~TldGdirLADFGVSAKn~--~t~q 185 (1187)
T KOG0579|consen 114 GAVDAIMLE---LGRVLTEDQIQVVCYQVLDALNWLHSQN---IIHRDLKAGNILLTLDGDIRLADFGVSAKNK--STRQ 185 (1187)
T ss_pred chHhHHHHH---hccccchHHHHHHHHHHHHHHHHHhhcc---hhhhhccccceEEEecCcEeeecccccccch--hHHh
Confidence 999888753 3457999999999999999999999998 9999999999999999999999999975432 2223
Q ss_pred cccccccccccccchhhh-----cCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccC
Q 003605 570 ISTRVMGTFGYVAPEYAM-----TGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIID 644 (808)
Q Consensus 570 ~~~~~~Gt~~Y~APE~l~-----~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD 644 (808)
......||+.|||||+++ ...|+.++||||||+.|.||..+..|-....+ ......+... --
T Consensus 186 kRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnp------MRVllKiaKS-------eP 252 (1187)
T KOG0579|consen 186 KRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNP------MRVLLKIAKS-------EP 252 (1187)
T ss_pred hhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccch------HHHHHHHhhc-------CC
Confidence 334578999999999876 46789999999999999999999998753322 1111111100 01
Q ss_pred CCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 645 PSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 645 ~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
|.|. -+......+.+++.+||.+||+.||+++++++
T Consensus 253 PTLl--qPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 253 PTLL--QPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred Cccc--CcchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 1111 13355678999999999999999999999985
No 350
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=7.4e-33 Score=305.10 Aligned_cols=271 Identities=24% Similarity=0.332 Sum_probs=201.8
Q ss_pred cCCHHHHHHHhCCcceeeeeeecCcEEEEEEEe-eCCCEEEEEEeecc--cchhhHHHHHHHHHHhhcccccceeEEeee
Q 003605 398 TFSASEIEKATGNFDASRILGEGGFGLVYSGVL-DDGTKVAVKVLKRV--DQQGGREFLAEVEMLSRLHHRNLVKLIGIC 474 (808)
Q Consensus 398 ~fs~~el~~at~~f~~~~~LG~G~fG~VYkg~l-~dg~~VAVK~lk~~--~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~ 474 (808)
.....++..++++|.+.+.||+|+||.||+|.. .+++.||+|+++.. .....+.+.+|++++.+++|+||+++++++
T Consensus 6 ~~~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~ 85 (345)
T cd07877 6 QELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVF 85 (345)
T ss_pred hhHHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeee
Confidence 345667778899999999999999999999985 47899999999753 223356788999999999999999999988
Q ss_pred eec------cceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCC
Q 003605 475 IEE------QARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHD 548 (808)
Q Consensus 475 ~~~------~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~ 548 (808)
... ...+++++++ +++|.+++.. ..+++..++.++.|+++||+|||+.+ |+||||||+||+++++
T Consensus 86 ~~~~~~~~~~~~~lv~~~~-~~~L~~~~~~-----~~l~~~~~~~i~~qi~~aL~~LH~~~---ivH~dlkp~NIll~~~ 156 (345)
T cd07877 86 TPARSLEEFNDVYLVTHLM-GADLNNIVKC-----QKLTDDHVQFLIYQILRGLKYIHSAD---IIHRDLKPSNLAVNED 156 (345)
T ss_pred eecccccccccEEEEehhc-ccCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eeecCCChHHEEEcCC
Confidence 643 3467888887 7899887742 25899999999999999999999998 9999999999999999
Q ss_pred Ccceecccccccccccccccccccccccccccccchhhhc-CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCc-chhH
Q 003605 549 FTPKVSDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMT-GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQ-ENLV 626 (808)
Q Consensus 549 ~~vKL~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~-~~lv 626 (808)
+.+||+|||+++..... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||........ ..+.
T Consensus 157 ~~~kl~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~~~~~~~ 231 (345)
T cd07877 157 CELKILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLIL 231 (345)
T ss_pred CCEEEeccccccccccc-----ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence 99999999998754221 123457889999998876 5678899999999999999999999864322110 0000
Q ss_pred Hhhh-------hhcccc--cc----cccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 627 AWAR-------PLLTSR--EG----LERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 627 ~w~~-------~~~~~~--~~----l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
.+.. ..+... .. +..+....+. +........+.+++.+|++.+|++||++.++++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 232 RLVGTPGAELLKKISSESARNYIQSLTQMPKMNFA-NVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred HHhCCCCHHHHhhcccHhHHHHHHHhcccCCcchh-hhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 0000 000000 00 0000000000 0001234568899999999999999999999765
No 351
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=7.8e-33 Score=292.51 Aligned_cols=262 Identities=26% Similarity=0.338 Sum_probs=197.2
Q ss_pred cceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc--chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeec
Q 003605 411 FDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD--QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELI 487 (808)
Q Consensus 411 f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~--~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~ 487 (808)
|+..+.||+|+||.||+|+.. +++.+|+|.++... ....+.+..|++++++++|+||+++++++.+.+..++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 556788999999999999976 58999999997542 333467889999999999999999999999999999999999
Q ss_pred CCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccc
Q 003605 488 PNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEES 567 (808)
Q Consensus 488 ~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~ 567 (808)
. ++|.+++... ...+++..+++++.++++||+|||+.+ |+||||+++||++++++.+||+|||+++.......
T Consensus 81 ~-~~l~~~i~~~---~~~~~~~~~~~~~~~i~~~l~~LH~~~---i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~ 153 (282)
T cd07829 81 D-MDLKKYLDKR---PGPLSPNLIKSIMYQLLRGLAYCHSHR---ILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR 153 (282)
T ss_pred C-cCHHHHHHhh---ccCCCHHHHHHHHHHHHHHHHHHHHCC---cccCCCChheEEEcCCCCEEEecCCcccccCCCcc
Confidence 7 5999999632 146899999999999999999999998 99999999999999999999999999876533221
Q ss_pred cccccccccccccccchhhhcC-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCc-chhHHhh-------hhhccc---
Q 003605 568 RHISTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQ-ENLVAWA-------RPLLTS--- 635 (808)
Q Consensus 568 ~~~~~~~~Gt~~Y~APE~l~~~-~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~-~~lv~w~-------~~~~~~--- 635 (808)
......++..|+|||++.+. .++.++|||||||++|||++|+.||........ ..+.... +.....
T Consensus 154 --~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (282)
T cd07829 154 --TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWPGVTKLPD 231 (282)
T ss_pred --ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHHhhccccc
Confidence 11233457789999998776 789999999999999999999999864321100 0000000 000000
Q ss_pred -ccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 636 -REGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 636 -~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
................ ......+.+++.+||+.+|++||++.+|+.
T Consensus 232 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 232 YKPTFPKFPPKDLEKVL-PRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred ccccccccCccchHHhc-ccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 0000000000000000 112457999999999999999999999975
No 352
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=4.1e-33 Score=303.44 Aligned_cols=266 Identities=25% Similarity=0.334 Sum_probs=200.6
Q ss_pred CcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc--chhhHHHHHHHHHHhhcccccceeEEeeeeecc-----ceE
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD--QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQ-----ARC 481 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~--~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~-----~~~ 481 (808)
+|.+.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+++++.++|+||+++++++...+ ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 5788999999999999999975 58999999987543 444578999999999999999999999998765 789
Q ss_pred EEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccc
Q 003605 482 LVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARS 561 (808)
Q Consensus 482 LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~ 561 (808)
+||||+. ++|.++++. ...+++..++.++.++++||+|||+.+ |+||||||+|||++.++.++|+|||++..
T Consensus 81 lv~e~~~-~~l~~~l~~----~~~l~~~~~~~i~~~l~~~l~~LH~~g---i~H~dlkp~nili~~~~~~~L~dfg~~~~ 152 (330)
T cd07834 81 IVTELME-TDLHKVIKS----PQPLTDDHIQYFLYQILRGLKYLHSAN---VIHRDLKPSNILVNSNCDLKICDFGLARG 152 (330)
T ss_pred EEecchh-hhHHHHHhC----CCCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEcccCceEe
Confidence 9999997 588888853 237999999999999999999999998 99999999999999999999999999986
Q ss_pred ccccccc-ccccccccccccccchhhhcC-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcc-hhHHhhhhhc-----
Q 003605 562 AMDEESR-HISTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQE-NLVAWARPLL----- 633 (808)
Q Consensus 562 ~~~~~~~-~~~~~~~Gt~~Y~APE~l~~~-~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~-~lv~w~~~~~----- 633 (808)
....... .......++..|+|||++.+. .++.++||||||+++|+|++|+.||......... .+..+.....
T Consensus 153 ~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~ 232 (330)
T cd07834 153 VDPDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDLK 232 (330)
T ss_pred ecccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHhh
Confidence 5432210 112334578899999999887 7899999999999999999999999654321100 0000000000
Q ss_pred -ccccccccccC---CCCC---CCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 634 -TSREGLERIID---PSLG---NDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 634 -~~~~~l~~ivD---~~l~---~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
.........+. .... ..........+.+++.+||+.+|++||++.++++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 289 (330)
T cd07834 233 FITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAH 289 (330)
T ss_pred hccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 00000000000 0000 00111234678999999999999999999999875
No 353
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=8.5e-33 Score=302.18 Aligned_cols=263 Identities=22% Similarity=0.274 Sum_probs=194.0
Q ss_pred CCcc-eeeeeeecCcEEEEEEEee-CCCEEEEEEeecccchh--------------hHHHHHHHHHHhhcccccceeEEe
Q 003605 409 GNFD-ASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQQG--------------GREFLAEVEMLSRLHHRNLVKLIG 472 (808)
Q Consensus 409 ~~f~-~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~~~--------------~~~f~~Ei~iL~~L~HpNIV~L~g 472 (808)
++|. +.+.||+|+||+||+|... +++.||||.++...... ...+.+|++++++++|+||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 4554 3477999999999999965 78999999986432211 125789999999999999999999
Q ss_pred eeeeccceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcce
Q 003605 473 ICIEEQARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPK 552 (808)
Q Consensus 473 ~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vK 552 (808)
++..++..++||||+. |+|.+++.. ...+++.....++.|++.||+|||+.+ ++||||+++||+++.++.+|
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~----~~~~~~~~~~~~~~ql~~aL~~LH~~~---i~H~dl~~~nill~~~~~~k 159 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDR----KIRLTESQVKCILLQILNGLNVLHKWY---FMHRDLSPANIFINSKGICK 159 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---eecccccHHHeEECCCCCEE
Confidence 9999999999999996 689888842 345889999999999999999999988 99999999999999999999
Q ss_pred eccccccccccccc------------ccccccccccccccccchhhhcC-CCccccceeeHHHHHHHHHhCCCCCCCCCC
Q 003605 553 VSDFGLARSAMDEE------------SRHISTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVILELLSGRKPVDMTQP 619 (808)
Q Consensus 553 L~DFGLa~~~~~~~------------~~~~~~~~~Gt~~Y~APE~l~~~-~~s~kSDVwSfGvvLlELlTG~~P~~~~~~ 619 (808)
|+|||+++...... .........++..|+|||++.+. .++.++|||||||++|||++|+.||.....
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~ 239 (335)
T PTZ00024 160 IADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENE 239 (335)
T ss_pred ECCccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH
Confidence 99999987543110 00111123467889999998764 468999999999999999999999965432
Q ss_pred CCcchhHHhhhhhccc--cccccc------------ccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 620 PGQENLVAWARPLLTS--REGLER------------IIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 620 ~~~~~lv~w~~~~~~~--~~~l~~------------ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
. ............ ...... .....+. .........+.+++.+|++.+|++||++.|++..
T Consensus 240 ~---~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~~ 313 (335)
T PTZ00024 240 I---DQLGRIFELLGTPNEDNWPQAKKLPLYTEFTPRKPKDLK-TIFPNASDDAIDLLQSLLKLNPLERISAKEALKH 313 (335)
T ss_pred H---HHHHHHHHHhCCCchhhCcchhhcccccccCcCCcccHH-HhCcCCChHHHHHHHHHcCCCchhccCHHHHhcC
Confidence 1 111111000000 000000 0000000 0011234678899999999999999999999763
No 354
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=1.4e-32 Score=300.66 Aligned_cols=266 Identities=21% Similarity=0.297 Sum_probs=192.5
Q ss_pred CcceeeeeeecCcEEEEEEEee-C--CCEEEEEEeecc--cchhhHHHHHHHHHHhhc-ccccceeEEeeeeec----cc
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-D--GTKVAVKVLKRV--DQQGGREFLAEVEMLSRL-HHRNLVKLIGICIEE----QA 479 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-d--g~~VAVK~lk~~--~~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~~~~~----~~ 479 (808)
+|++.+.||+|+||.||+++.. + +..||||++... .....+.+.+|++++.++ +|+||+++++++... ..
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 5788899999999999999965 3 778999998742 223356788999999999 599999999976432 45
Q ss_pred eEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccc
Q 003605 480 RCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLA 559 (808)
Q Consensus 480 ~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa 559 (808)
.++++||+. ++|.+++.. ...+++..++.++.|++.||+|||+.+ |+||||||+|||++.++.+||+|||++
T Consensus 81 ~~~~~e~~~-~~L~~~l~~----~~~~~~~~~~~~~~qi~~aL~~LH~~g---ivH~dlkp~Nili~~~~~~kl~Dfg~a 152 (332)
T cd07857 81 LYLYEELME-ADLHQIIRS----GQPLTDAHFQSFIYQILCGLKYIHSAN---VLHRDLKPGNLLVNADCELKICDFGLA 152 (332)
T ss_pred EEEEEeccc-CCHHHHHhc----CCCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHeEEcCCCCEEeCcCCCc
Confidence 688889885 689888852 346899999999999999999999998 999999999999999999999999999
Q ss_pred ccccccccc--ccccccccccccccchhhhc-CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCc-chhH--------H
Q 003605 560 RSAMDEESR--HISTRVMGTFGYVAPEYAMT-GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQ-ENLV--------A 627 (808)
Q Consensus 560 ~~~~~~~~~--~~~~~~~Gt~~Y~APE~l~~-~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~-~~lv--------~ 627 (808)
+........ .......|+..|+|||++.+ ..++.++|||||||++|+|++|+.||........ .... .
T Consensus 153 ~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~ 232 (332)
T cd07857 153 RGFSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEE 232 (332)
T ss_pred eecccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCHH
Confidence 765432211 11123468899999998766 4678999999999999999999999865332100 0000 0
Q ss_pred hhhhhccccc-ccccccCCCCC---CCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 628 WARPLLTSRE-GLERIIDPSLG---NDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 628 w~~~~~~~~~-~l~~ivD~~l~---~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
+...+..... ......+..-. ..........+.+++.+|++.+|++||++.|+++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~~ 292 (332)
T cd07857 233 TLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALEH 292 (332)
T ss_pred HHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000000000 00000000000 00011224678999999999999999999998754
No 355
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-34 Score=343.55 Aligned_cols=254 Identities=27% Similarity=0.387 Sum_probs=202.1
Q ss_pred HhCCcceeeeeeecCcEEEEEEE-eeCCCEEEEEEeec--ccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEE
Q 003605 407 ATGNFDASRILGEGGFGLVYSGV-LDDGTKVAVKVLKR--VDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLV 483 (808)
Q Consensus 407 at~~f~~~~~LG~G~fG~VYkg~-l~dg~~VAVK~lk~--~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV 483 (808)
.+-++....+||.|.||.||-|+ +++|+..|||-++. ........+.+|+.+|..|+|||+|+++|+-.+.+..+|.
T Consensus 1233 V~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~IF 1312 (1509)
T KOG4645|consen 1233 VTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVYIF 1312 (1509)
T ss_pred ceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHHHH
Confidence 34456677899999999999998 56899999998863 3344567788999999999999999999999999999999
Q ss_pred EeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccc
Q 003605 484 YELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAM 563 (808)
Q Consensus 484 ~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~ 563 (808)
||||++|+|.+.+. .+...++.....+..|++.|++|||+++ ||||||||.|||||.+|-+|++|||.|....
T Consensus 1313 MEyC~~GsLa~ll~----~gri~dE~vt~vyt~qll~gla~LH~~g---IVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~ 1385 (1509)
T KOG4645|consen 1313 MEYCEGGSLASLLE----HGRIEDEMVTRVYTKQLLEGLAYLHEHG---IVHRDIKPANILLDFNGLIKYGDFGSAVKIK 1385 (1509)
T ss_pred HHHhccCcHHHHHH----hcchhhhhHHHHHHHHHHHHHHHHHhcC---ceecCCCccceeeecCCcEEeecccceeEec
Confidence 99999999999995 3334556666677889999999999999 9999999999999999999999999998765
Q ss_pred cccc--cccccccccccccccchhhhcCC---CccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccc
Q 003605 564 DEES--RHISTRVMGTFGYVAPEYAMTGH---LLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREG 638 (808)
Q Consensus 564 ~~~~--~~~~~~~~Gt~~Y~APE~l~~~~---~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~ 638 (808)
.... .......+||+-|||||++.+.. ...+.||||+|||++||+||++||...+. .|+.-..
T Consensus 1386 ~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dn-------e~aIMy~----- 1453 (1509)
T KOG4645|consen 1386 NNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDN-------EWAIMYH----- 1453 (1509)
T ss_pred CchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccc-------hhHHHhH-----
Confidence 4321 11123568999999999987533 45689999999999999999999964432 2321111
Q ss_pred cccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 639 LERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 639 l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
+-..-...+|.....+-.+++.+||+.||++|+++.|+++.
T Consensus 1454 ----V~~gh~Pq~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle~ 1494 (1509)
T KOG4645|consen 1454 ----VAAGHKPQIPERLSSEGRDFLEHCLEQDPKMRWTASQLLEH 1494 (1509)
T ss_pred ----HhccCCCCCchhhhHhHHHHHHHHHhcCchhhhHHHHHHHh
Confidence 11111233455566778899999999999999988877553
No 356
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8.1e-34 Score=291.50 Aligned_cols=253 Identities=25% Similarity=0.377 Sum_probs=201.6
Q ss_pred HhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc--------chhhHHHHHHHHHHhhc-ccccceeEEeeeee
Q 003605 407 ATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD--------QQGGREFLAEVEMLSRL-HHRNLVKLIGICIE 476 (808)
Q Consensus 407 at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~--------~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~~~~ 476 (808)
..++|...++||.|..++|-+...+ +|..+|+|++.... ..-.++-.+|++||+++ -||||+.+.++|..
T Consensus 15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes 94 (411)
T KOG0599|consen 15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES 94 (411)
T ss_pred HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC
Confidence 4466778889999999999888765 78899999985321 11234566799999998 59999999999999
Q ss_pred ccceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccc
Q 003605 477 EQARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDF 556 (808)
Q Consensus 477 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DF 556 (808)
....++|+|.|+.|-|.|+|. ....+++....+|+.|+.+|++|||..+ ||||||||+|||+|++.++||+||
T Consensus 95 ~sF~FlVFdl~prGELFDyLt----s~VtlSEK~tR~iMrqlfegVeylHa~~---IVHRDLKpENILlddn~~i~isDF 167 (411)
T KOG0599|consen 95 DAFVFLVFDLMPRGELFDYLT----SKVTLSEKETRRIMRQLFEGVEYLHARN---IVHRDLKPENILLDDNMNIKISDF 167 (411)
T ss_pred cchhhhhhhhcccchHHHHhh----hheeecHHHHHHHHHHHHHHHHHHHHhh---hhhcccChhheeeccccceEEecc
Confidence 999999999999999999995 4567999999999999999999999998 999999999999999999999999
Q ss_pred ccccccccccccccccccccccccccchhhhc------CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhh
Q 003605 557 GLARSAMDEESRHISTRVMGTFGYVAPEYAMT------GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWAR 630 (808)
Q Consensus 557 GLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~------~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~ 630 (808)
|++..+.... .-...+||++|+|||.+.. ..|+...|+|+.|||||-|+.|..||-.... + -..+
T Consensus 168 GFa~~l~~Ge---kLrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwHRkQ-----m-lMLR 238 (411)
T KOG0599|consen 168 GFACQLEPGE---KLRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWHRKQ-----M-LMLR 238 (411)
T ss_pred ceeeccCCch---hHHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhHHHH-----H-HHHH
Confidence 9998765432 3356889999999998864 2467889999999999999999999942110 0 0011
Q ss_pred hhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 631 PLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 631 ~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
.++ ++-.++-.+.+ .+......+|+.+||+.||.+|.|.+|+++.
T Consensus 239 ~Im---eGkyqF~speW-----adis~~~KdLIsrlLqVdp~~Ritake~LaH 283 (411)
T KOG0599|consen 239 MIM---EGKYQFRSPEW-----ADISATVKDLISRLLQVDPTKRITAKEALAH 283 (411)
T ss_pred HHH---hcccccCCcch-----hhccccHHHHHHHHHeeCchhcccHHHHhcC
Confidence 111 11111111111 2445678999999999999999999999875
No 357
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=1.1e-32 Score=303.45 Aligned_cols=264 Identities=22% Similarity=0.348 Sum_probs=197.2
Q ss_pred HHHHhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc--cchhhHHHHHHHHHHhhcccccceeEEeeeeecc--
Q 003605 404 IEKATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV--DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQ-- 478 (808)
Q Consensus 404 l~~at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~--~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~-- 478 (808)
+....++|.+.+.||+|+||.||++... +++.||||+++.. .....+.+.+|++++++++|+||+++++++....
T Consensus 10 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 89 (343)
T cd07880 10 IWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSL 89 (343)
T ss_pred hhccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccc
Confidence 3446788999999999999999999854 7899999998642 2333457889999999999999999999987543
Q ss_pred ----ceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceec
Q 003605 479 ----ARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVS 554 (808)
Q Consensus 479 ----~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~ 554 (808)
..++||||+ +++|.+++.. ..+++..++.++.|+++||+|||+.+ |+||||||+||+++.++.+||+
T Consensus 90 ~~~~~~~lv~e~~-~~~l~~~~~~-----~~l~~~~~~~i~~qi~~al~~LH~~g---i~H~dlkp~Nill~~~~~~kl~ 160 (343)
T cd07880 90 DRFHDFYLVMPFM-GTDLGKLMKH-----EKLSEDRIQFLVYQMLKGLKYIHAAG---IIHRDLKPGNLAVNEDCELKIL 160 (343)
T ss_pred cccceEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEe
Confidence 358999999 7789888742 35899999999999999999999988 9999999999999999999999
Q ss_pred ccccccccccccccccccccccccccccchhhhc-CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCc-chhH------
Q 003605 555 DFGLARSAMDEESRHISTRVMGTFGYVAPEYAMT-GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQ-ENLV------ 626 (808)
Q Consensus 555 DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~-~~lv------ 626 (808)
|||+++..... .....++..|+|||.+.+ ..++.++|||||||++|+|++|+.||........ ..+.
T Consensus 161 dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~~~~~~~ 235 (343)
T cd07880 161 DFGLARQTDSE-----MTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHLDQLMEIMKVTGTP 235 (343)
T ss_pred ecccccccccC-----ccccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCC
Confidence 99998754321 123457889999999876 4578999999999999999999999964321100 0000
Q ss_pred --HhhhhhcccccccccccC--CCCC----CCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 627 --AWARPLLTSREGLERIID--PSLG----NDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 627 --~w~~~~~~~~~~l~~ivD--~~l~----~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
.|...+... ....... +... ..........+.+++.+|++.||++||++.++++.
T Consensus 236 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~~ 298 (343)
T cd07880 236 SKEFVQKLQSE--DAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALAH 298 (343)
T ss_pred CHHHHHhhcch--hHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 000000000 0000000 0000 00112234568899999999999999999999853
No 358
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=7.9e-33 Score=314.57 Aligned_cols=272 Identities=25% Similarity=0.358 Sum_probs=207.8
Q ss_pred cceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc-cchhhHHHHHHHHHHhhcccccceeEEeeeeecc------ceEE
Q 003605 411 FDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV-DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQ------ARCL 482 (808)
Q Consensus 411 f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~-~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~------~~~L 482 (808)
+...+.||+|+||.||+|+.+ .|+.||||.++.. .....+...+|+++|++|+|+|||++++.-.+.. ...+
T Consensus 15 W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~vl 94 (732)
T KOG4250|consen 15 WEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPVL 94 (732)
T ss_pred eeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccceE
Confidence 334578999999999999954 8999999999863 3445678899999999999999999999865543 5589
Q ss_pred EEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeec--CCC--cceeccccc
Q 003605 483 VYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLE--HDF--TPKVSDFGL 558 (808)
Q Consensus 483 V~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd--~~~--~vKL~DFGL 558 (808)
|||||.+|||+..|..-.+ ...|.+.+.+.+..+++.||.|||+++ |+||||||.||++- +++ --||+|||.
T Consensus 95 vmEyC~gGsL~~~L~~PEN-~~GLpE~e~l~lL~d~~~al~~LrEn~---IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~ 170 (732)
T KOG4250|consen 95 VMEYCSGGSLRKVLNSPEN-AYGLPESEFLDLLSDLVSALRHLRENG---IVHRDLKPGNIVLQIGEDGQSIYKLTDFGA 170 (732)
T ss_pred EEeecCCCcHHHHhcCccc-ccCCCHHHHHHHHHHHHHHHHHHHHcC---ceeccCCCCcEEEeecCCCceEEeeecccc
Confidence 9999999999999976443 457999999999999999999999998 99999999999993 333 469999999
Q ss_pred ccccccccccccccccccccccccchhhhc-CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccccc
Q 003605 559 ARSAMDEESRHISTRVMGTFGYVAPEYAMT-GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSRE 637 (808)
Q Consensus 559 a~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~ 637 (808)
||...++. ..+.++||..|++||.... +.|+...|.|||||++||.+||..||..........-+.|..... ...
T Consensus 171 Arel~d~s---~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tk-kp~ 246 (732)
T KOG4250|consen 171 ARELDDNS---LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITK-KPS 246 (732)
T ss_pred cccCCCCC---eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhcc-CCC
Confidence 99775433 4567889999999999984 889999999999999999999999998765443222233321111 111
Q ss_pred ccccccCCCCC------------CCCChhhHHHHHHHHHHccccCCCCCC--CHHHHHHHHHHHHHh
Q 003605 638 GLERIIDPSLG------------NDVPFDSVAKVAAIASMCVQPEVQHRP--FMGEVVQALKLVCNE 690 (808)
Q Consensus 638 ~l~~ivD~~l~------------~~~~~~~~~~l~~Li~~Cl~~dP~~RP--sm~eVl~~Le~i~~~ 690 (808)
......++... ..........+......++..++++|. ...+....+..|++.
T Consensus 247 ~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~~ 313 (732)
T KOG4250|consen 247 GVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILNL 313 (732)
T ss_pred ceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHhh
Confidence 11111111111 111234456777888888899999999 777777777666654
No 359
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=1.1e-32 Score=303.16 Aligned_cols=267 Identities=23% Similarity=0.314 Sum_probs=194.9
Q ss_pred hCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeec---------
Q 003605 408 TGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEE--------- 477 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~--------- 477 (808)
..+|...+.||+|+||.||+|... +|+.||+|.+........+.+.+|++++++++|+||+++++++...
T Consensus 4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~ 83 (342)
T cd07854 4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVG 83 (342)
T ss_pred CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccc
Confidence 478999999999999999999865 6889999999765556667899999999999999999999876543
Q ss_pred -----cceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecC-CCcc
Q 003605 478 -----QARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEH-DFTP 551 (808)
Q Consensus 478 -----~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~-~~~v 551 (808)
...++|+||+. ++|.+++.. ..+.+...+.++.|++.||+|||+.+ |+||||||+||+++. ++.+
T Consensus 84 ~~~~~~~~~lv~e~~~-~~L~~~~~~-----~~l~~~~~~~~~~qi~~aL~~LH~~g---ivH~dikp~Nili~~~~~~~ 154 (342)
T cd07854 84 SLTELNSVYIVQEYME-TDLANVLEQ-----GPLSEEHARLFMYQLLRGLKYIHSAN---VLHRDLKPANVFINTEDLVL 154 (342)
T ss_pred cccccceEEEEeeccc-ccHHHHHHc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEcCCCceE
Confidence 35689999996 588887742 35889999999999999999999998 999999999999974 5678
Q ss_pred eeccccccccccccccc-ccccccccccccccchhhhc-CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhh
Q 003605 552 KVSDFGLARSAMDEESR-HISTRVMGTFGYVAPEYAMT-GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWA 629 (808)
Q Consensus 552 KL~DFGLa~~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~-~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~ 629 (808)
||+|||+++........ .......++..|+|||.+.. ..++.++|||||||++|||++|+.||...............
T Consensus 155 kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~ 234 (342)
T cd07854 155 KIGDFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILES 234 (342)
T ss_pred EECCcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHh
Confidence 99999998754321111 11123357889999998754 56788999999999999999999999654321111000000
Q ss_pred hhhccc--cccc----cc-ccCCCCCCC-----CChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 630 RPLLTS--REGL----ER-IIDPSLGND-----VPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 630 ~~~~~~--~~~l----~~-ivD~~l~~~-----~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
.+.... .... .. +.+...... .......++.+++.+|++.||++||++.|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~h 300 (342)
T cd07854 235 VPVVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALMH 300 (342)
T ss_pred cCCCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhCC
Confidence 000000 0000 00 000000000 011233568899999999999999999999754
No 360
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3e-33 Score=331.24 Aligned_cols=254 Identities=26% Similarity=0.377 Sum_probs=190.7
Q ss_pred HHHhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc-cchhhHHHHHHHHHHhhcccccceeEEeeeeec-----
Q 003605 405 EKATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV-DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEE----- 477 (808)
Q Consensus 405 ~~at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~-~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~----- 477 (808)
-+...+|++.++||+||||.|||++.+ ||+.||||++.-. .......+.+|++.|++|+|||||+++..+.+.
T Consensus 475 SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~ 554 (1351)
T KOG1035|consen 475 SRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELT 554 (1351)
T ss_pred hhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccc
Confidence 346678999999999999999999987 8999999998642 445556789999999999999999997544310
Q ss_pred --------------------------------------------------------------------------------
Q 003605 478 -------------------------------------------------------------------------------- 477 (808)
Q Consensus 478 -------------------------------------------------------------------------------- 477 (808)
T Consensus 555 ~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS 634 (1351)
T KOG1035|consen 555 VLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTS 634 (1351)
T ss_pred cccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCccccccccccccccccc
Confidence
Q ss_pred ----------------------------------cceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHH
Q 003605 478 ----------------------------------QARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALA 523 (808)
Q Consensus 478 ----------------------------------~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~ 523 (808)
..+|+-||||+..+|.++++...-. -.-...|+++.+|++||+
T Consensus 635 ~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~---~~~d~~wrLFreIlEGLa 711 (1351)
T KOG1035|consen 635 DSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFN---SQRDEAWRLFREILEGLA 711 (1351)
T ss_pred ccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccc---hhhHHHHHHHHHHHHHHH
Confidence 1146778888887777777532111 135678999999999999
Q ss_pred HHHhcCCCcEEeeeecccCeeecCCCcceecccccccccc------cc----------cccccccccccccccccchhhh
Q 003605 524 YLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAM------DE----------ESRHISTRVMGTFGYVAPEYAM 587 (808)
Q Consensus 524 yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~------~~----------~~~~~~~~~~Gt~~Y~APE~l~ 587 (808)
|+|+.+ ||||||||.|||||++..|||+|||+|.... +. ......+..+||.-|+|||++.
T Consensus 712 YIH~~g---iIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~ 788 (1351)
T KOG1035|consen 712 YIHDQG---IIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLS 788 (1351)
T ss_pred HHHhCc---eeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhc
Confidence 999998 9999999999999999999999999997621 00 0111224567999999999987
Q ss_pred cC---CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCC--CCCChhhHHHHHHH
Q 003605 588 TG---HLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLG--NDVPFDSVAKVAAI 662 (808)
Q Consensus 588 ~~---~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~--~~~~~~~~~~l~~L 662 (808)
+. .|+.|+|+||+||||+||+. ||... +.-+ ..+..+-+..+. .++..+.+..=..+
T Consensus 789 ~~~~~~Yn~KiDmYSLGIVlFEM~y---PF~Ts-----MERa----------~iL~~LR~g~iP~~~~f~~~~~~~e~sl 850 (1351)
T KOG1035|consen 789 DTSSNKYNSKIDMYSLGIVLFEMLY---PFGTS-----MERA----------SILTNLRKGSIPEPADFFDPEHPEEASL 850 (1351)
T ss_pred ccccccccchhhhHHHHHHHHHHhc---cCCch-----HHHH----------HHHHhcccCCCCCCcccccccchHHHHH
Confidence 65 49999999999999999986 34321 1111 111111122221 22344556667889
Q ss_pred HHHccccCCCCCCCHHHHHH
Q 003605 663 ASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 663 i~~Cl~~dP~~RPsm~eVl~ 682 (808)
+.+++++||.+|||+.|+++
T Consensus 851 I~~Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 851 IRWLLSHDPSKRPTATELLN 870 (1351)
T ss_pred HHHHhcCCCccCCCHHHHhh
Confidence 99999999999999999975
No 361
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=2.5e-32 Score=299.06 Aligned_cols=265 Identities=25% Similarity=0.337 Sum_probs=198.3
Q ss_pred HHHHhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc--cchhhHHHHHHHHHHhhcccccceeEEeeeee-ccc
Q 003605 404 IEKATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV--DQQGGREFLAEVEMLSRLHHRNLVKLIGICIE-EQA 479 (808)
Q Consensus 404 l~~at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~--~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~-~~~ 479 (808)
+..++++|+..+.||+|+||.||++... +++.||||++... .....+.+.+|++++.+++|+||+++++++.. ...
T Consensus 5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 84 (328)
T cd07856 5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLED 84 (328)
T ss_pred eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCc
Confidence 4457899999999999999999999855 7899999988642 23345678899999999999999999999865 457
Q ss_pred eEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccc
Q 003605 480 RCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLA 559 (808)
Q Consensus 480 ~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa 559 (808)
.++|+||+ +++|.++++. ..+.+.....++.|+++||+|||+.+ |+||||+|+|||+++++.+||+|||++
T Consensus 85 ~~lv~e~~-~~~L~~~~~~-----~~~~~~~~~~~~~ql~~aL~~LH~~~---iiH~dl~p~Nili~~~~~~~l~dfg~~ 155 (328)
T cd07856 85 IYFVTELL-GTDLHRLLTS-----RPLEKQFIQYFLYQILRGLKYVHSAG---VVHRDLKPSNILINENCDLKICDFGLA 155 (328)
T ss_pred EEEEeehh-ccCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEeECCCCCEEeCccccc
Confidence 89999999 5688888752 34788888999999999999999988 999999999999999999999999998
Q ss_pred cccccccccccccccccccccccchhhhc-CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCc-chhHH--------hh
Q 003605 560 RSAMDEESRHISTRVMGTFGYVAPEYAMT-GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQ-ENLVA--------WA 629 (808)
Q Consensus 560 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~-~~lv~--------w~ 629 (808)
+..... .....++..|+|||++.+ ..++.++|||||||++|||+||+.||........ ..+.+ |.
T Consensus 156 ~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 230 (328)
T cd07856 156 RIQDPQ-----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDDVI 230 (328)
T ss_pred cccCCC-----cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHHHH
Confidence 753221 122356788999998766 5689999999999999999999999864321100 00111 11
Q ss_pred hhhcccccccccccCCCCCCCCC-----hhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 630 RPLLTSREGLERIIDPSLGNDVP-----FDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 630 ~~~~~~~~~l~~ivD~~l~~~~~-----~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
..... ......+.+-......+ ......+.+++.+|++.+|++||++.+++..
T Consensus 231 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 231 NTICS-ENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred Hhccc-hhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 11000 00000000000001111 1234678999999999999999999998665
No 362
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=1.2e-32 Score=303.09 Aligned_cols=261 Identities=25% Similarity=0.342 Sum_probs=197.7
Q ss_pred HHhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc--cchhhHHHHHHHHHHhhcccccceeEEeeeeeccc---
Q 003605 406 KATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV--DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQA--- 479 (808)
Q Consensus 406 ~at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~--~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~--- 479 (808)
...++|...+.||+|+||.||+|... +++.||||++... .....+++.+|+.++++++|+||+++++++...+.
T Consensus 12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED 91 (343)
T ss_pred cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence 35688999999999999999999975 6789999998642 23344678889999999999999999998876554
Q ss_pred ---eEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccc
Q 003605 480 ---RCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDF 556 (808)
Q Consensus 480 ---~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DF 556 (808)
.++|+||+ +++|.+++.. ..+++..++.++.|+++||+|||+.+ |+||||||+||++++++.+||+||
T Consensus 92 ~~~~~lv~e~~-~~~L~~~~~~-----~~l~~~~~~~~~~ql~~aL~~LH~~g---i~H~dlkp~Nill~~~~~~kL~df 162 (343)
T cd07851 92 FQDVYLVTHLM-GADLNNIVKC-----QKLSDDHIQFLVYQILRGLKYIHSAG---IIHRDLKPSNIAVNEDCELKILDF 162 (343)
T ss_pred cccEEEEEecC-CCCHHHHHhc-----CCCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCCHHHeEECCCCCEEEccc
Confidence 79999999 6799988852 35899999999999999999999988 999999999999999999999999
Q ss_pred ccccccccccccccccccccccccccchhhhc-CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcc-
Q 003605 557 GLARSAMDEESRHISTRVMGTFGYVAPEYAMT-GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLT- 634 (808)
Q Consensus 557 GLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~- 634 (808)
|++...... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||...... ..+........
T Consensus 163 g~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~---~~~~~i~~~~~~ 234 (343)
T cd07851 163 GLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHI---DQLKRIMNLVGT 234 (343)
T ss_pred ccccccccc-----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH---HHHHHHHHhcCC
Confidence 998764322 123457889999998865 36789999999999999999999999643221 11110000000
Q ss_pred c---------ccccccccCCCC---CCCC---ChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 635 S---------REGLERIIDPSL---GNDV---PFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 635 ~---------~~~l~~ivD~~l---~~~~---~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
. .+....++.... ...+ .......+.+++.+||+.+|++|||+.||++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~h 298 (343)
T cd07851 235 PDEELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALAH 298 (343)
T ss_pred CCHHHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhcC
Confidence 0 000000000000 0000 01235679999999999999999999999764
No 363
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.6e-33 Score=302.85 Aligned_cols=248 Identities=24% Similarity=0.344 Sum_probs=202.9
Q ss_pred hCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeec---ccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEE
Q 003605 408 TGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKR---VDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLV 483 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~---~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV 483 (808)
.+.|..-++||+|+||.||-.+.. +|+.+|.|++.+ ...+++.-.++|-.||.+++.+.||.+-..|...+.+|||
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClV 263 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLV 263 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEE
Confidence 366888999999999999998865 799999998853 2344556678999999999999999999999999999999
Q ss_pred EeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccc
Q 003605 484 YELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAM 563 (808)
Q Consensus 484 ~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~ 563 (808)
+..|+||+|.-||..... ..+++...+-+|.+|+.||++||+.. ||.|||||+|||||+.|+++|+|.|||..+.
T Consensus 264 LtlMNGGDLkfHiyn~g~--~gF~e~ra~FYAAEi~cGLehlH~~~---iVYRDLKPeNILLDd~GhvRISDLGLAvei~ 338 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNHGN--PGFDEQRARFYAAEIICGLEHLHRRR---IVYRDLKPENILLDDHGHVRISDLGLAVEIP 338 (591)
T ss_pred EEeecCCceeEEeeccCC--CCCchHHHHHHHHHHHhhHHHHHhcc---eeeccCChhheeeccCCCeEeeccceEEecC
Confidence 999999999999975432 46899999999999999999999998 9999999999999999999999999998765
Q ss_pred cccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccccccccccc
Q 003605 564 DEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERII 643 (808)
Q Consensus 564 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~iv 643 (808)
.... + +..+||.+|||||+++++.|+...|.|||||+||||+.|+.||...... +.| +.+++.+
T Consensus 339 ~g~~--~-~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeK-----vk~--------eEvdrr~ 402 (591)
T KOG0986|consen 339 EGKP--I-RGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEK-----VKR--------EEVDRRT 402 (591)
T ss_pred CCCc--c-ccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhh-----hhH--------HHHHHHH
Confidence 4322 2 2337999999999999999999999999999999999999999643321 111 1111110
Q ss_pred CCCCCCCCChhhHHHHHHHHHHccccCCCCCCCH
Q 003605 644 DPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFM 677 (808)
Q Consensus 644 D~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm 677 (808)
-. -...+++....+...|....|.+||++|-.-
T Consensus 403 ~~-~~~ey~~kFS~eakslc~~LL~Kdp~~RLGc 435 (591)
T KOG0986|consen 403 LE-DPEEYSDKFSEEAKSLCEGLLTKDPEKRLGC 435 (591)
T ss_pred hc-chhhcccccCHHHHHHHHHHHccCHHHhccC
Confidence 00 0123455666788889999999999999644
No 364
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.98 E-value=1.5e-34 Score=293.24 Aligned_cols=253 Identities=23% Similarity=0.329 Sum_probs=200.2
Q ss_pred HhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEee--cccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEE
Q 003605 407 ATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLK--RVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLV 483 (808)
Q Consensus 407 at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk--~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV 483 (808)
.+++|++.++||+|.|+.||+.... +|+.+|+|++. +....+.+++.+|++|-+.|+|||||+|.+.+.+++..+||
T Consensus 9 f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylv 88 (355)
T KOG0033|consen 9 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLV 88 (355)
T ss_pred cchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEE
Confidence 3567788889999999999998754 78999999875 33445678899999999999999999999999999999999
Q ss_pred EeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecC---CCcceeccccccc
Q 003605 484 YELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEH---DFTPKVSDFGLAR 560 (808)
Q Consensus 484 ~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~---~~~vKL~DFGLa~ 560 (808)
+|+|.+++|..-+-. +...++...-..+.||+++|.|+|.++ |||||+||.|+||-. .--+||+|||+|.
T Consensus 89 Fe~m~G~dl~~eIV~----R~~ySEa~aSH~~rQiLeal~yCH~n~---IvHRDvkP~nllLASK~~~A~vKL~~FGvAi 161 (355)
T KOG0033|consen 89 FDLVTGGELFEDIVA----REFYSEADASHCIQQILEALAYCHSNG---IVHRDLKPENLLLASKAKGAAVKLADFGLAI 161 (355)
T ss_pred EecccchHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHhcC---ceeccCChhheeeeeccCCCceeecccceEE
Confidence 999999999876632 234566677788999999999999998 999999999999943 3468999999998
Q ss_pred ccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccc
Q 003605 561 SAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLE 640 (808)
Q Consensus 561 ~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~ 640 (808)
...+. ......+||++|||||++....|+..+|||+.|||||-|+.|+.||...+ +..+... +....-
T Consensus 162 ~l~~g---~~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~---~~rlye~---I~~g~y--- 229 (355)
T KOG0033|consen 162 EVNDG---EAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDED---QHRLYEQ---IKAGAY--- 229 (355)
T ss_pred EeCCc---cccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCcc---HHHHHHH---Hhcccc---
Confidence 77522 23344679999999999999999999999999999999999999996422 1222111 111100
Q ss_pred cccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 641 RIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 641 ~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
-+++... .....+..+|+++||..||.+|.|+.|.++.
T Consensus 230 -d~~~~~w----~~is~~Ak~LvrrML~~dP~kRIta~EAL~H 267 (355)
T KOG0033|consen 230 -DYPSPEW----DTVTPEAKSLIRRMLTVNPKKRITADEALKH 267 (355)
T ss_pred -CCCCccc----CcCCHHHHHHHHHHhccChhhhccHHHHhCC
Confidence 0111111 1234567889999999999999999998754
No 365
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=99.98 E-value=2.7e-32 Score=283.32 Aligned_cols=236 Identities=31% Similarity=0.364 Sum_probs=192.3
Q ss_pred eeecCcEEEEEEEee-CCCEEEEEEeeccc---chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecCCCCc
Q 003605 417 LGEGGFGLVYSGVLD-DGTKVAVKVLKRVD---QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIPNGSV 492 (808)
Q Consensus 417 LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~---~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~~GsL 492 (808)
||+|+||.||++... +++.+|+|.++... ....+.+..|++++++++|+||+++++.+..++..++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 689999999999976 58999999987532 22456889999999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccccccccc
Q 003605 493 ESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRHIST 572 (808)
Q Consensus 493 ~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~~~~ 572 (808)
.+++.. ...+++..+..++.|++.||.|||+.+ ++|+||+|+||+++.++.++|+|||++....... ....
T Consensus 81 ~~~l~~----~~~l~~~~~~~~~~qi~~~l~~lh~~~---~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~--~~~~ 151 (250)
T cd05123 81 FSHLSK----EGRFSEERARFYAAEIVLALEYLHSLG---IIYRDLKPENILLDADGHIKLTDFGLAKELSSEG--SRTN 151 (250)
T ss_pred HHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHHCC---ceecCCCcceEEEcCCCcEEEeecCcceecccCC--Cccc
Confidence 999853 235899999999999999999999987 9999999999999999999999999987653321 1223
Q ss_pred ccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCCCCC
Q 003605 573 RVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGNDVP 652 (808)
Q Consensus 573 ~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~~~~ 652 (808)
...++..|++||.+.+...+.++|+||||+++|||++|+.||..... ....... . .. ....+
T Consensus 152 ~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~---~~~~~~~---~----------~~--~~~~~ 213 (250)
T cd05123 152 TFCGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR---KEIYEKI---L----------KD--PLRFP 213 (250)
T ss_pred CCcCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH---HHHHHHH---h----------cC--CCCCC
Confidence 45678899999999888889999999999999999999999964321 1111111 1 00 01122
Q ss_pred hhhHHHHHHHHHHccccCCCCCCCHHH
Q 003605 653 FDSVAKVAAIASMCVQPEVQHRPFMGE 679 (808)
Q Consensus 653 ~~~~~~l~~Li~~Cl~~dP~~RPsm~e 679 (808)
......+.+++.+|+..||++||++++
T Consensus 214 ~~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 214 EFLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred CCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 223467899999999999999999955
No 366
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.98 E-value=1.4e-32 Score=300.47 Aligned_cols=248 Identities=26% Similarity=0.385 Sum_probs=208.6
Q ss_pred hCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeec--ccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEE
Q 003605 408 TGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKR--VDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVY 484 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~--~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~ 484 (808)
.+-|++++.||+|.|..|-.|++- +|+.||||++.+ .+......+++|++.|+.++|||||+||.+......+|||+
T Consensus 17 AGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiL 96 (864)
T KOG4717|consen 17 AGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLIL 96 (864)
T ss_pred eeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEE
Confidence 455777789999999999888743 799999999975 34455567889999999999999999999999999999999
Q ss_pred eecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeee-cCCCcceecccccccccc
Q 003605 485 ELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILL-EHDFTPKVSDFGLARSAM 563 (808)
Q Consensus 485 Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILL-d~~~~vKL~DFGLa~~~~ 563 (808)
|+=.+|+|.|||-. ....+.++-..+++.||..|+.|+|+.+ +|||||||+||.+ ..-|-+||.|||++-.+.
T Consensus 97 ELGD~GDl~DyImK---He~Gl~E~La~kYF~QI~~AI~YCHqLH---VVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~ 170 (864)
T KOG4717|consen 97 ELGDGGDLFDYIMK---HEEGLNEDLAKKYFAQIVHAISYCHQLH---VVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQ 170 (864)
T ss_pred EecCCchHHHHHHh---hhccccHHHHHHHHHHHHHHHHHHhhhh---hhcccCCcceeEEeeecCceEeeeccccccCC
Confidence 99999999999963 4456999999999999999999999998 9999999999977 455889999999997765
Q ss_pred cccccccccccccccccccchhhhcCCCc-cccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccc
Q 003605 564 DEESRHISTRVMGTFGYVAPEYAMTGHLL-VKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERI 642 (808)
Q Consensus 564 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s-~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~i 642 (808)
... .-+..+|...|.|||++.+..|+ .+.||||||||||-|++|+.||+..... +.+-.|
T Consensus 171 PG~---kL~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDS----------------ETLTmI 231 (864)
T KOG4717|consen 171 PGK---KLTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDS----------------ETLTMI 231 (864)
T ss_pred Ccc---hhhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccch----------------hhhhhh
Confidence 433 23456899999999999999886 5789999999999999999999765432 333344
Q ss_pred cCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 643 IDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 643 vD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
+|=. -..+.-...++.+||..||..||++|.+.+||+.
T Consensus 232 mDCK--YtvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 232 MDCK--YTVPSHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred hccc--ccCchhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 4432 2345566788999999999999999999999874
No 367
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.98 E-value=2.9e-32 Score=306.55 Aligned_cols=248 Identities=23% Similarity=0.348 Sum_probs=206.3
Q ss_pred HHhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc--cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEE
Q 003605 406 KATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV--DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCL 482 (808)
Q Consensus 406 ~at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~--~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~L 482 (808)
.....|.+...||+|.|+.|..|+.. ++..||||.+.+. +....+.+.+|+++|..|+|||||+++.+...+..+|+
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lyl 132 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYL 132 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEE
Confidence 34578999999999999999999965 7999999999763 33334568899999999999999999999999999999
Q ss_pred EEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccc
Q 003605 483 VYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSA 562 (808)
Q Consensus 483 V~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~ 562 (808)
||||+.+|.+.+||... ..+...+...++.|+.+|++|||+++ |+|||||++|||||.+.++||+|||++..+
T Consensus 133 V~eya~~ge~~~yl~~~----gr~~e~~ar~~F~q~vsaveYcH~k~---ivHrdLk~eNilL~~~mnikIaDfgfS~~~ 205 (596)
T KOG0586|consen 133 VMEYASGGELFDYLVKH----GRMKEKEARAKFRQIVSAVEYCHSKN---IVHRDLKAENILLDENMNIKIADFGFSTFF 205 (596)
T ss_pred EEEeccCchhHHHHHhc----ccchhhhhhhhhHHHHHHHHHHhhcc---eeccccchhhcccccccceeeeccccceee
Confidence 99999999999999643 24555788889999999999999998 999999999999999999999999999866
Q ss_pred ccccccccccccccccccccchhhhcCCC-ccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccccccccc
Q 003605 563 MDEESRHISTRVMGTFGYVAPEYAMTGHL-LVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLER 641 (808)
Q Consensus 563 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~-s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ 641 (808)
. ........+|++.|.|||++++..| ....|+||+|++||-|+.|..||+.... .+
T Consensus 206 ~---~~~~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~l--------------------k~ 262 (596)
T KOG0586|consen 206 D---YGLMLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNL--------------------KE 262 (596)
T ss_pred c---ccccccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccc--------------------cc
Confidence 3 3444556789999999999998876 6799999999999999999999974321 11
Q ss_pred ccCCCCCCC--CChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 642 IIDPSLGND--VPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 642 ivD~~l~~~--~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
+-++.+.+. ++.-...++.+++++++..+|.+|+++.++-+.
T Consensus 263 Lr~rvl~gk~rIp~~ms~dce~lLrk~lvl~Pskr~~~dqim~~ 306 (596)
T KOG0586|consen 263 LRPRVLRGKYRIPFYMSCDCEDLLRKFLVLNPSKRGPCDQIMKD 306 (596)
T ss_pred ccchheeeeecccceeechhHHHHHHhhccCccccCCHHHhhhh
Confidence 112222221 233345578899999999999999999998653
No 368
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.97 E-value=8.7e-33 Score=284.18 Aligned_cols=253 Identities=26% Similarity=0.435 Sum_probs=199.2
Q ss_pred cCCHHHHHHHhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc-cchhhHHHHHHHHHHhhcc-cccceeEEeee
Q 003605 398 TFSASEIEKATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV-DQQGGREFLAEVEMLSRLH-HRNLVKLIGIC 474 (808)
Q Consensus 398 ~fs~~el~~at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~-~~~~~~~f~~Ei~iL~~L~-HpNIV~L~g~~ 474 (808)
.-+..||+.. ..||.|..|.|+++++. .|..+|||.+.+. +.+..++++..+.++..-+ +|.||+.+|||
T Consensus 88 ~~dindl~~l-------~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyF 160 (391)
T KOG0983|consen 88 QADINDLENL-------GDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYF 160 (391)
T ss_pred ccChHHhhhH-------HhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEE
Confidence 3455565544 46999999999999976 6899999999763 4556678888888887775 89999999999
Q ss_pred eeccceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceec
Q 003605 475 IEEQARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVS 554 (808)
Q Consensus 475 ~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~ 554 (808)
......++.||.|. -.++.+|+ .-..++.+..+-++...+.+||.||.+++ .|||||+||+|||+|+.|++|+|
T Consensus 161 i~n~dV~IcMelMs-~C~ekLlk---rik~piPE~ilGk~tva~v~AL~YLKeKH--~viHRDvKPSNILlDe~GniKlC 234 (391)
T KOG0983|consen 161 ITNTDVFICMELMS-TCAEKLLK---RIKGPIPERILGKMTVAIVKALYYLKEKH--GVIHRDVKPSNILLDERGNIKLC 234 (391)
T ss_pred eeCchHHHHHHHHH-HHHHHHHH---HhcCCchHHhhhhhHHHHHHHHHHHHHhc--ceeecccCccceEEccCCCEEee
Confidence 99999999999994 35555554 22346888888899999999999999876 69999999999999999999999
Q ss_pred ccccccccccccccccccccccccccccchhhhc---CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhh
Q 003605 555 DFGLARSAMDEESRHISTRVMGTFGYVAPEYAMT---GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARP 631 (808)
Q Consensus 555 DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~---~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~ 631 (808)
|||++-.+.+. ...++..|-+.|||||.+.- ..|+-++||||||+.|+||.||+.||..-...
T Consensus 235 DFGIsGrlvdS---kAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~td----------- 300 (391)
T KOG0983|consen 235 DFGISGRLVDS---KAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTD----------- 300 (391)
T ss_pred cccccceeecc---cccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCcc-----------
Confidence 99999766442 22356679999999998863 46888999999999999999999999753221
Q ss_pred hcccccccccccC---CCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 632 LLTSREGLERIID---PSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 632 ~~~~~~~l~~ivD---~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
-+.+..+++ |.|.. .......+.+++..||.+|+.+||.+.++++.
T Consensus 301 ----Fe~ltkvln~ePP~L~~--~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~h 349 (391)
T KOG0983|consen 301 ----FEVLTKVLNEEPPLLPG--HMGFSPDFQSFVKDCLTKDHRKRPKYNKLLEH 349 (391)
T ss_pred ----HHHHHHHHhcCCCCCCc--ccCcCHHHHHHHHHHhhcCcccCcchHHHhcC
Confidence 111112222 22211 12256789999999999999999999999865
No 369
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.97 E-value=1.4e-31 Score=320.18 Aligned_cols=146 Identities=31% Similarity=0.410 Sum_probs=131.2
Q ss_pred hCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc---chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEE
Q 003605 408 TGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD---QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLV 483 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~---~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV 483 (808)
.++|.+.+.||+|+||+||+|... +++.||||+++... ......+.+|++++..++|+||+++++++...+..+||
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 367999999999999999999976 78999999997532 33346788999999999999999999999999999999
Q ss_pred EeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccc
Q 003605 484 YELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLAR 560 (808)
Q Consensus 484 ~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~ 560 (808)
|||+.+++|.++++. ...+++..+++|+.||+.||+|||..+ |+||||||+||||+.++.+||+|||+++
T Consensus 83 mEy~~g~~L~~li~~----~~~l~~~~~~~i~~qil~aL~yLH~~g---IiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 83 MEYLIGGDVKSLLHI----YGYFDEEMAVKYISEVALALDYLHRHG---IIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EeCCCCCCHHHHHHh----cCCCCHHHHHHHHHHHHHHHHHHHhCC---EEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 999999999999863 235888999999999999999999987 9999999999999999999999999986
No 370
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.97 E-value=1e-33 Score=290.24 Aligned_cols=260 Identities=24% Similarity=0.357 Sum_probs=200.7
Q ss_pred cCCHHHHHHHhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc-chhhHHHHHHHHHHhhc-ccccceeEEeee
Q 003605 398 TFSASEIEKATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD-QQGGREFLAEVEMLSRL-HHRNLVKLIGIC 474 (808)
Q Consensus 398 ~fs~~el~~at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~-~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~~ 474 (808)
.|+.++|+.. ..||.|+||+|+|-.++ .|+.+|||+++... ....++++.|.+...+- +++|||+++|.+
T Consensus 60 ~F~~~~Lqdl-------g~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~ 132 (361)
T KOG1006|consen 60 TFTSDNLQDL-------GEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGAL 132 (361)
T ss_pred ccccchHHHH-------HHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhh
Confidence 4665666544 46999999999999876 79999999998543 45667899999987665 699999999999
Q ss_pred eeccceEEEEeecCCCCccccccc-cccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCccee
Q 003605 475 IEEQARCLVYELIPNGSVESHLHG-VDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKV 553 (808)
Q Consensus 475 ~~~~~~~LV~Ey~~~GsL~~~L~~-~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL 553 (808)
..++..++.||.|. -||+.+... +......+++...-.|+.-..+||.||.+.. +||||||||+|||||..|.+||
T Consensus 133 F~EGdcWiCMELMd-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~l--kiIHRDvKPSNILldr~G~vKL 209 (361)
T KOG1006|consen 133 FSEGDCWICMELMD-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEEL--KIIHRDVKPSNILLDRHGDVKL 209 (361)
T ss_pred hcCCceeeeHHHHh-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHh--hhhhccCChhheEEecCCCEee
Confidence 99999999999994 577665431 1223456888888899999999999999765 6999999999999999999999
Q ss_pred cccccccccccccccccccccccccccccchhhhc--CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhh
Q 003605 554 SDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMT--GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARP 631 (808)
Q Consensus 554 ~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~--~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~ 631 (808)
||||++-.+.+. ...+.-.|-.-|||||.+.. ..|+-+|||||||+.|+|+.||+.|+..+. ++.+....
T Consensus 210 CDFGIcGqLv~S---iAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~-----svfeql~~ 281 (361)
T KOG1006|consen 210 CDFGICGQLVDS---IAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWD-----SVFEQLCQ 281 (361)
T ss_pred ecccchHhHHHH---HHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHH-----HHHHHHHH
Confidence 999999765432 22345568889999998863 348889999999999999999999997432 12222211
Q ss_pred hcccccccccccCC-CCCCC-CChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 632 LLTSREGLERIIDP-SLGND-VPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 632 ~~~~~~~l~~ivD~-~l~~~-~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
... -|+ .+..+ -..+....+..++..|+.+|-..||.+.++.++
T Consensus 282 Vv~--------gdpp~l~~~~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 282 VVI--------GDPPILLFDKECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred HHc--------CCCCeecCcccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 111 111 11111 123466789999999999999999999998765
No 371
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=2.7e-32 Score=285.55 Aligned_cols=240 Identities=26% Similarity=0.351 Sum_probs=195.9
Q ss_pred hCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc---cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEE
Q 003605 408 TGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV---DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLV 483 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~---~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV 483 (808)
.++|+..++||+|.||+|..++-+ .|+.+|||++++. .......-+.|-++|+..+||.+..|...+...+.+|+|
T Consensus 167 m~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCFV 246 (516)
T KOG0690|consen 167 MEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCFV 246 (516)
T ss_pred cchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEEE
Confidence 367888999999999999999855 7899999999863 334445567899999999999999999999999999999
Q ss_pred EeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccc
Q 003605 484 YELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAM 563 (808)
Q Consensus 484 ~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~ 563 (808)
|||..+|.|.-+|. +...++++...-.-..|..||.|||+++ ||.||||.+|.|||.+|++||+||||++.-.
T Consensus 247 MeyanGGeLf~HLs----rer~FsE~RtRFYGaEIvsAL~YLHs~~---ivYRDlKLENLlLDkDGHIKitDFGLCKE~I 319 (516)
T KOG0690|consen 247 MEYANGGELFFHLS----RERVFSEDRTRFYGAEIVSALGYLHSRN---IVYRDLKLENLLLDKDGHIKITDFGLCKEEI 319 (516)
T ss_pred EEEccCceEeeehh----hhhcccchhhhhhhHHHHHHhhhhhhCC---eeeeechhhhheeccCCceEeeecccchhcc
Confidence 99999999999995 2345777777778889999999999988 9999999999999999999999999998543
Q ss_pred cccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccccccccccc
Q 003605 564 DEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERII 643 (808)
Q Consensus 564 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~iv 643 (808)
. ........+||+.|+|||++....|..+.|.|.+|||+|||++|+.||...+. + .+.+++
T Consensus 320 ~--~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh---~--------------kLFeLI 380 (516)
T KOG0690|consen 320 K--YGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDH---E--------------KLFELI 380 (516)
T ss_pred c--ccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccch---h--------------HHHHHH
Confidence 2 22334567899999999999999999999999999999999999999964221 1 111111
Q ss_pred C-CCCCCCCChhhHHHHHHHHHHccccCCCCCC
Q 003605 644 D-PSLGNDVPFDSVAKVAAIASMCVQPEVQHRP 675 (808)
Q Consensus 644 D-~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RP 675 (808)
- .. -.++.....+...|+...|.+||.+|.
T Consensus 381 l~ed--~kFPr~ls~eAktLLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 381 LMED--LKFPRTLSPEAKTLLSGLLKKDPKKRL 411 (516)
T ss_pred Hhhh--ccCCccCCHHHHHHHHHHhhcChHhhc
Confidence 1 11 113334445677788889999999995
No 372
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=3.5e-31 Score=270.43 Aligned_cols=237 Identities=30% Similarity=0.398 Sum_probs=192.4
Q ss_pred CcEEEEEEEee-CCCEEEEEEeecccchh-hHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecCCCCccccccc
Q 003605 421 GFGLVYSGVLD-DGTKVAVKVLKRVDQQG-GREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIPNGSVESHLHG 498 (808)
Q Consensus 421 ~fG~VYkg~l~-dg~~VAVK~lk~~~~~~-~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~~GsL~~~L~~ 498 (808)
+||.||+|+.. +++.+|+|++....... .+.+.+|++.+++++|+|++++++++......++++||+.+++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999986 58999999997654433 68999999999999999999999999998999999999999999999863
Q ss_pred cccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccccccccccccccc
Q 003605 499 VDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRHISTRVMGTF 578 (808)
Q Consensus 499 ~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~~~~~~~Gt~ 578 (808)
. ..+++..++.++.+++++|+|||+.+ ++|+||+++||++++++.++|+|||++....... ......++.
T Consensus 81 ~----~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~ 150 (244)
T smart00220 81 R----GRLSEDEARFYARQILSALEYLHSNG---IIHRDLKPENILLDEDGHVKLADFGLARQLDPGG---LLTTFVGTP 150 (244)
T ss_pred c----cCCCHHHHHHHHHHHHHHHHHHHHcC---eecCCcCHHHeEECCCCcEEEccccceeeecccc---ccccccCCc
Confidence 2 23889999999999999999999987 9999999999999999999999999998654322 223455788
Q ss_pred ccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCCCCCh-hhHH
Q 003605 579 GYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGNDVPF-DSVA 657 (808)
Q Consensus 579 ~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~~~~~-~~~~ 657 (808)
.|++||.+....++.++|||+||++++||++|..||+... ....+..+... ......... ....
T Consensus 151 ~~~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~--~~~~~~~~~~~-------------~~~~~~~~~~~~~~ 215 (244)
T smart00220 151 EYMAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDD--QLLELFKKIGK-------------PKPPFPPPEWKISP 215 (244)
T ss_pred CCCCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCC--cHHHHHHHHhc-------------cCCCCccccccCCH
Confidence 9999999988889999999999999999999999986421 11222222110 000000000 0346
Q ss_pred HHHHHHHHccccCCCCCCCHHHHHH
Q 003605 658 KVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 658 ~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
.+.+++.+|+..+|++||++.++++
T Consensus 216 ~~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 216 EAKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHHHHHHccCCchhccCHHHHhh
Confidence 7999999999999999999999986
No 373
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=2.5e-31 Score=276.81 Aligned_cols=222 Identities=20% Similarity=0.190 Sum_probs=176.5
Q ss_pred cCcEEEEEEEee-CCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecCCCCccccccc
Q 003605 420 GGFGLVYSGVLD-DGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIPNGSVESHLHG 498 (808)
Q Consensus 420 G~fG~VYkg~l~-dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~~GsL~~~L~~ 498 (808)
|.||.||++... +++.||+|+++... .+.+|...+....|+||+++++++.+.+..++||||+++|+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 889999999865 78999999997542 233455555566799999999999999999999999999999999853
Q ss_pred cccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccccccccccccccc
Q 003605 499 VDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRHISTRVMGTF 578 (808)
Q Consensus 499 ~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~~~~~~~Gt~ 578 (808)
...+++..+..++.|++.||+|||+.+ |+||||||+||+++.++.++++|||++...... .....++.
T Consensus 79 ----~~~l~~~~~~~~~~ql~~~l~~lH~~~---i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~-----~~~~~~~~ 146 (237)
T cd05576 79 ----FLNIPEECVKRWAAEMVVALDALHREG---IVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS-----CDGEAVEN 146 (237)
T ss_pred ----hcCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHEEEcCCCCEEEecccchhccccc-----cccCCcCc
Confidence 235899999999999999999999988 999999999999999999999999987654321 12234567
Q ss_pred ccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCCCCChhhHHH
Q 003605 579 GYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGNDVPFDSVAK 658 (808)
Q Consensus 579 ~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~~~~~~~~~~ 658 (808)
.|+|||++....++.++||||+||++|||++|+.+++..... .. ... ....+......
T Consensus 147 ~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~------------~~------~~~----~~~~~~~~~~~ 204 (237)
T cd05576 147 MYCAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSG------------IN------THT----TLNIPEWVSEE 204 (237)
T ss_pred cccCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchh------------cc------ccc----ccCCcccCCHH
Confidence 899999998888899999999999999999999876432110 00 000 00122223467
Q ss_pred HHHHHHHccccCCCCCCCHHHH
Q 003605 659 VAAIASMCVQPEVQHRPFMGEV 680 (808)
Q Consensus 659 l~~Li~~Cl~~dP~~RPsm~eV 680 (808)
+.+++.+|++.||++|+++.+.
T Consensus 205 ~~~li~~~l~~dp~~R~~~~~~ 226 (237)
T cd05576 205 ARSLLQQLLQFNPTERLGAGVA 226 (237)
T ss_pred HHHHHHHHccCCHHHhcCCCcc
Confidence 8899999999999999997443
No 374
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=3.9e-31 Score=305.46 Aligned_cols=261 Identities=27% Similarity=0.405 Sum_probs=212.9
Q ss_pred CCHHHHHHHhCCcceeeeeeecCcEEEEEEEe-eCCCEEEEEEeecccchhhHHHHHHHHHHhhc-ccccceeEEeeeee
Q 003605 399 FSASEIEKATGNFDASRILGEGGFGLVYSGVL-DDGTKVAVKVLKRVDQQGGREFLAEVEMLSRL-HHRNLVKLIGICIE 476 (808)
Q Consensus 399 fs~~el~~at~~f~~~~~LG~G~fG~VYkg~l-~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~~~~ 476 (808)
..++.+..-++-|++.++||+|.+|.||+++. ++++.+|||++.- +....++...|.+||+.+ +|+|++.++|++..
T Consensus 9 ~~~~~lpdp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~-~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k 87 (953)
T KOG0587|consen 9 IDLSSLPDPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDP-TEDEEEEIELEYNMLKKYSHHPNVATFYGAFIK 87 (953)
T ss_pred cchhhCCCCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecC-CccccHHHHHHHHHHHhccCCCCcceEEEEEEE
Confidence 44555566778899999999999999999994 5889999998864 344557888999999988 69999999999864
Q ss_pred -----ccceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcc
Q 003605 477 -----EQARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTP 551 (808)
Q Consensus 477 -----~~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~v 551 (808)
+++++||||||.+||..|++++.. +..+.|..+..|+..+++||++||.+. ++|||||-.||||+.++.+
T Consensus 88 ~~~~~~DqLWLVMEfC~gGSVTDLVKn~~--g~rl~E~~IaYI~re~lrgl~HLH~nk---viHRDikG~NiLLT~e~~V 162 (953)
T KOG0587|consen 88 KDPGNGDQLWLVMEFCGGGSVTDLVKNTK--GNRLKEEWIAYILREILRGLAHLHNNK---VIHRDIKGQNVLLTENAEV 162 (953)
T ss_pred ecCCCCCeEEEEeeccCCccHHHHHhhhc--ccchhhHHHHHHHHHHHHHHHHHhhcc---eeeecccCceEEEeccCcE
Confidence 478899999999999999998765 567999999999999999999999987 9999999999999999999
Q ss_pred eecccccccccccccccccccccccccccccchhhhc-----CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhH
Q 003605 552 KVSDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMT-----GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLV 626 (808)
Q Consensus 552 KL~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-----~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv 626 (808)
||+|||.+..+.. .........||+.|||||++.. ..|+.++|+||||++..||.-|..|+-...+.
T Consensus 163 KLvDFGvSaQlds--T~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPm------ 234 (953)
T KOG0587|consen 163 KLVDFGVSAQLDS--TVGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPM------ 234 (953)
T ss_pred EEeeeeeeeeeec--ccccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchh------
Confidence 9999999876533 2333344679999999999864 35678999999999999999999998543221
Q ss_pred Hhhhhhcccccccccc-cCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 627 AWARPLLTSREGLERI-IDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 627 ~w~~~~~~~~~~l~~i-vD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
+. +..+ -+|...-.-+.....++.++|..||.+|-++||++.+++++
T Consensus 235 ---ra-------LF~IpRNPPPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~h 282 (953)
T KOG0587|consen 235 ---RA-------LFLIPRNPPPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLKH 282 (953)
T ss_pred ---hh-------hccCCCCCCccccchhhHHHHHHHHHHHHHhhccccCcchhhhccC
Confidence 11 1111 11222222356778899999999999999999999998753
No 375
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=1.9e-30 Score=298.85 Aligned_cols=262 Identities=18% Similarity=0.260 Sum_probs=183.8
Q ss_pred HhCCcceeeeeeecCcEEEEEEEe-----------------eCCCEEEEEEeecccchhhHHH--------------HHH
Q 003605 407 ATGNFDASRILGEGGFGLVYSGVL-----------------DDGTKVAVKVLKRVDQQGGREF--------------LAE 455 (808)
Q Consensus 407 at~~f~~~~~LG~G~fG~VYkg~l-----------------~dg~~VAVK~lk~~~~~~~~~f--------------~~E 455 (808)
..++|++.++||+|+||+||+|.+ .+++.||||+++.......++| ..|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 467899999999999999999964 2456899999975433333333 447
Q ss_pred HHHHhhcccccc-----eeEEeeeee--------ccceEEEEeecCCCCcccccccccc--------------------C
Q 003605 456 VEMLSRLHHRNL-----VKLIGICIE--------EQARCLVYELIPNGSVESHLHGVDK--------------------E 502 (808)
Q Consensus 456 i~iL~~L~HpNI-----V~L~g~~~~--------~~~~~LV~Ey~~~GsL~~~L~~~~~--------------------~ 502 (808)
+.++.+++|.|+ ++++++|.. ++..+|||||+++|+|.++|+.... .
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777888876654 678888753 3567999999999999999974211 1
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccccccccccccccccccc
Q 003605 503 SAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRHISTRVMGTFGYVA 582 (808)
Q Consensus 503 ~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~A 582 (808)
...++|..+..|+.|++.||+|||+.+ |+||||||+|||++.++.+||+|||+++....... .......+++.|+|
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH~~~---ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~-~~~~~g~~tp~Y~a 378 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLHRIG---IVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGIN-FNPLYGMLDPRYSP 378 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHCC---eecCCCchHhEEECCCCcEEEEeCcCccccccCCc-cCccccCCCcceeC
Confidence 124678899999999999999999988 99999999999999999999999999975432211 11112335789999
Q ss_pred chhhhcCCC----------------------ccccceeeHHHHHHHHHhCCC-CCCCCCCCC------cchhHHhhhhhc
Q 003605 583 PEYAMTGHL----------------------LVKSDVYSYGVVILELLSGRK-PVDMTQPPG------QENLVAWARPLL 633 (808)
Q Consensus 583 PE~l~~~~~----------------------s~kSDVwSfGvvLlELlTG~~-P~~~~~~~~------~~~lv~w~~~~~ 633 (808)
||.+..... ..+.||||+||||+||++|.. |+....... ..++..|.. .
T Consensus 379 PE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~--~ 456 (507)
T PLN03224 379 PEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRM--Y 456 (507)
T ss_pred hhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHh--h
Confidence 998754321 234799999999999999875 664221100 111122211 0
Q ss_pred ccccccccccCCCCCCCCChhhHHHHHHHHHHccccCC---CCCCCHHHHHHH
Q 003605 634 TSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEV---QHRPFMGEVVQA 683 (808)
Q Consensus 634 ~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP---~~RPsm~eVl~~ 683 (808)
.. ....-...........+++.+++..++ .+|+|++|++++
T Consensus 457 ~~---------~~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~H 500 (507)
T PLN03224 457 KG---------QKYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALSH 500 (507)
T ss_pred cc---------cCCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhCC
Confidence 00 000000112234567889999998765 689999999764
No 376
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.97 E-value=1.7e-31 Score=278.67 Aligned_cols=204 Identities=25% Similarity=0.338 Sum_probs=168.4
Q ss_pred CCcceeeeeeecCcEEEEEEEee---C--CCEEEEEEeecccc--hhhHHHHHHHHHHhhcccccceeEEeeeee-ccce
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD---D--GTKVAVKVLKRVDQ--QGGREFLAEVEMLSRLHHRNLVKLIGICIE-EQAR 480 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~---d--g~~VAVK~lk~~~~--~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~-~~~~ 480 (808)
..|+....||+|.||.||||+-. + ...+|||+++.... .......+||.+++.|+|+||+.|..++.. +...
T Consensus 24 ~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~v 103 (438)
T KOG0666|consen 24 FEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKKV 103 (438)
T ss_pred HHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCceE
Confidence 46788899999999999999643 2 23689999975322 123467899999999999999999999887 7788
Q ss_pred EEEEeecCCCCccccccccc-cCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCC----Ccceecc
Q 003605 481 CLVYELIPNGSVESHLHGVD-KESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHD----FTPKVSD 555 (808)
Q Consensus 481 ~LV~Ey~~~GsL~~~L~~~~-~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~----~~vKL~D 555 (808)
+|++||.+. +|...++-.+ .....++-.....|++||+.|+.|||++. |+||||||.|||+..+ |.+||+|
T Consensus 104 ~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NW---vlHRDLKPaNIlvmgdgperG~VKIaD 179 (438)
T KOG0666|consen 104 WLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNW---VLHRDLKPANILVMGDGPERGRVKIAD 179 (438)
T ss_pred EEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhh---eeeccCCcceEEEeccCCccCeeEeec
Confidence 999999975 8888886433 23356888899999999999999999998 9999999999999766 9999999
Q ss_pred ccccccccccccc-ccccccccccccccchhhhc-CCCccccceeeHHHHHHHHHhCCCCCCC
Q 003605 556 FGLARSAMDEESR-HISTRVMGTFGYVAPEYAMT-GHLLVKSDVYSYGVVILELLSGRKPVDM 616 (808)
Q Consensus 556 FGLa~~~~~~~~~-~~~~~~~Gt~~Y~APE~l~~-~~~s~kSDVwSfGvvLlELlTG~~P~~~ 616 (808)
||++|.+.+.-.. .....++-|++|+|||.+.+ ..||.+.|||+.|||+.||+|-..-|..
T Consensus 180 lGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g 242 (438)
T KOG0666|consen 180 LGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKG 242 (438)
T ss_pred ccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccc
Confidence 9999987543322 23356788999999999987 4689999999999999999998877754
No 377
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=3.1e-30 Score=302.44 Aligned_cols=262 Identities=20% Similarity=0.217 Sum_probs=171.2
Q ss_pred HhCCcceeeeeeecCcEEEEEEEee-C----CCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEee------ee
Q 003605 407 ATGNFDASRILGEGGFGLVYSGVLD-D----GTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGI------CI 475 (808)
Q Consensus 407 at~~f~~~~~LG~G~fG~VYkg~l~-d----g~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~------~~ 475 (808)
..++|++.+.||+|+||.||+|++. + +..||||+++..... +.+..| .+.+..+.+++.++.. +.
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~--e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV--EIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh--HHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 5678999999999999999999975 4 689999998643221 111111 1222222333322222 24
Q ss_pred eccceEEEEeecCCCCccccccccccC----------------CCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeec
Q 003605 476 EEQARCLVYELIPNGSVESHLHGVDKE----------------SAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFK 539 (808)
Q Consensus 476 ~~~~~~LV~Ey~~~GsL~~~L~~~~~~----------------~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIK 539 (808)
.++..++||||+.+++|.++++..... .....+..+..|+.|++.||+|||+.+ |+|||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~g---IiHRDLK 282 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTG---IVHRDVK 282 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCC---EEeCcCC
Confidence 557889999999999999988642110 011123445679999999999999988 9999999
Q ss_pred ccCeeecC-CCcceecccccccccccccccccccccccccccccchhhhcC----------------------CCccccc
Q 003605 540 SSNILLEH-DFTPKVSDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMTG----------------------HLLVKSD 596 (808)
Q Consensus 540 psNILLd~-~~~vKL~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~----------------------~~s~kSD 596 (808)
|+||||++ ++.+||+|||+|+..... .........+++.|+|||.+... .+..++|
T Consensus 283 P~NILl~~~~~~~KL~DFGlA~~l~~~-~~~~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~D 361 (566)
T PLN03225 283 PQNIIFSEGSGSFKIIDLGAAADLRVG-INYIPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFD 361 (566)
T ss_pred HHHEEEeCCCCcEEEEeCCCccccccc-cccCCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCcc
Confidence 99999986 579999999999754322 22233456789999999965322 2345679
Q ss_pred eeeHHHHHHHHHhCCCCCCCCCC-------CCcchhHHhhhhhcccccccccccCCCCCCC--CChhhHHHHHHHHHHcc
Q 003605 597 VYSYGVVILELLSGRKPVDMTQP-------PGQENLVAWARPLLTSREGLERIIDPSLGND--VPFDSVAKVAAIASMCV 667 (808)
Q Consensus 597 VwSfGvvLlELlTG~~P~~~~~~-------~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~~--~~~~~~~~l~~Li~~Cl 667 (808)
||||||+||||+++..+.+.... ....++..|....... ..+.+... ..........+|+.+||
T Consensus 362 VwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~d~~~~~~~dLi~~mL 434 (566)
T PLN03225 362 IYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKLVEPR-------ASPDLRRGFEVLDLDGGAGWELLKSMM 434 (566)
T ss_pred cHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHhhccc-------cchhhhhhhhhccccchHHHHHHHHHc
Confidence 99999999999998766542100 0011122222111100 00000000 00111234568999999
Q ss_pred ccCCCCCCCHHHHHHH
Q 003605 668 QPEVQHRPFMGEVVQA 683 (808)
Q Consensus 668 ~~dP~~RPsm~eVl~~ 683 (808)
+.||++|||+.|++++
T Consensus 435 ~~dP~kR~ta~e~L~H 450 (566)
T PLN03225 435 RFKGRQRISAKAALAH 450 (566)
T ss_pred cCCcccCCCHHHHhCC
Confidence 9999999999999874
No 378
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.96 E-value=1.2e-30 Score=272.93 Aligned_cols=267 Identities=23% Similarity=0.363 Sum_probs=203.6
Q ss_pred CHHHHHHHhCCcceeeeeeecCcEEEEEEE-eeCCCEEEEEEeecccchhhHHHHHHHHHHhhcc-cccceeEEeeeeec
Q 003605 400 SASEIEKATGNFDASRILGEGGFGLVYSGV-LDDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLH-HRNLVKLIGICIEE 477 (808)
Q Consensus 400 s~~el~~at~~f~~~~~LG~G~fG~VYkg~-l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~-HpNIV~L~g~~~~~ 477 (808)
.++|+-+.|+ ++||+|+|+.|--++ +.+|.++|||++.+.......+..+|++++.+.+ |+||++|+++|+++
T Consensus 74 ~F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd 148 (463)
T KOG0607|consen 74 KFEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDD 148 (463)
T ss_pred hHHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhccc
Confidence 3566666663 789999999999887 6689999999998877777889999999999996 99999999999999
Q ss_pred cceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCC---cceec
Q 003605 478 QARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDF---TPKVS 554 (808)
Q Consensus 478 ~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~---~vKL~ 554 (808)
...|||||-|.+|.|..+|++ +..+++.++.++..+||.||.|||.++ |.||||||+|||..... -+|||
T Consensus 149 ~~FYLVfEKm~GGplLshI~~----~~~F~E~EAs~vvkdia~aLdFlH~kg---IAHRDlKPENiLC~~pn~vsPvKiC 221 (463)
T KOG0607|consen 149 TRFYLVFEKMRGGPLLSHIQK----RKHFNEREASRVVKDIASALDFLHTKG---IAHRDLKPENILCESPNKVSPVKIC 221 (463)
T ss_pred ceEEEEEecccCchHHHHHHH----hhhccHHHHHHHHHHHHHHHHHHhhcC---cccccCCccceeecCCCCcCceeee
Confidence 999999999999999999963 346899999999999999999999998 99999999999996653 48999
Q ss_pred ccccccccccc-ccccc----ccccccccccccchhhh-----cCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcch
Q 003605 555 DFGLARSAMDE-ESRHI----STRVMGTFGYVAPEYAM-----TGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQEN 624 (808)
Q Consensus 555 DFGLa~~~~~~-~~~~~----~~~~~Gt~~Y~APE~l~-----~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~ 624 (808)
||.|..-.... +-... -...+|+..|||||+.. ...|+.++|.||||||||-|++|..||...-..+
T Consensus 222 DfDLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~d--- 298 (463)
T KOG0607|consen 222 DFDLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGAD--- 298 (463)
T ss_pred ccccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCc---
Confidence 99987432111 11111 12356888999999764 2467889999999999999999999997654322
Q ss_pred hHHhhhhhccc--ccccccccCCCCCCCCChh----hHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 625 LVAWARPLLTS--REGLERIIDPSLGNDVPFD----SVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 625 lv~w~~~~~~~--~~~l~~ivD~~l~~~~~~~----~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
..|-+..... .+.+.+-+.... -++|+. ...+..+++...+..++.+|-++.++++.
T Consensus 299 -CGWdrGe~Cr~CQ~~LFesIQEGk-YeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vlnh 361 (463)
T KOG0607|consen 299 -CGWDRGEVCRVCQNKLFESIQEGK-YEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLNH 361 (463)
T ss_pred -CCccCCCccHHHHHHHHHHHhccC-CcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccCC
Confidence 2233221111 111111111111 122322 24566778888888999999999998773
No 379
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1e-30 Score=307.79 Aligned_cols=258 Identities=23% Similarity=0.311 Sum_probs=205.2
Q ss_pred HHHHHHHhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeec---ccchhhHHHHHHHHHHhhcccccceeEEeeeee
Q 003605 401 ASEIEKATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKR---VDQQGGREFLAEVEMLSRLHHRNLVKLIGICIE 476 (808)
Q Consensus 401 ~~el~~at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~---~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~ 476 (808)
..++....++|++.++||+|+||.|..++.+ +++.||+|++++ .......-|..|-.+|..-+.+-|++|...|.+
T Consensus 67 v~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD 146 (1317)
T KOG0612|consen 67 VKELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQD 146 (1317)
T ss_pred HHHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcC
Confidence 3455556689999999999999999999976 688999999986 233445678889999998899999999999999
Q ss_pred ccceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccc
Q 003605 477 EQARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDF 556 (808)
Q Consensus 477 ~~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DF 556 (808)
+.++|||||||+||+|-.+|..+. .++++.+..++..+..||.-||+.| +|||||||+|||||..|++||+||
T Consensus 147 ~~~LYlVMdY~pGGDlltLlSk~~----~~pE~~ArFY~aEiVlAldslH~mg---yVHRDiKPDNvLld~~GHikLADF 219 (1317)
T KOG0612|consen 147 ERYLYLVMDYMPGGDLLTLLSKFD----RLPEDWARFYTAEIVLALDSLHSMG---YVHRDIKPDNVLLDKSGHIKLADF 219 (1317)
T ss_pred ccceEEEEecccCchHHHHHhhcC----CChHHHHHHHHHHHHHHHHHHHhcc---ceeccCCcceeEecccCcEeeccc
Confidence 999999999999999999996432 5888888888999999999999998 999999999999999999999999
Q ss_pred ccccccccccccccccccccccccccchhhhc-----CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhh
Q 003605 557 GLARSAMDEESRHISTRVMGTFGYVAPEYAMT-----GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARP 631 (808)
Q Consensus 557 GLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~-----~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~ 631 (808)
|.|-.+.. +....+...+||+.|++||++.. +.|+..+|.||+||++|||+.|..||.. ..++.--..
T Consensus 220 GsClkm~~-dG~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYa------dslveTY~K 292 (1317)
T KOG0612|consen 220 GSCLKMDA-DGTVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYA------DSLVETYGK 292 (1317)
T ss_pred hhHHhcCC-CCcEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchH------HHHHHHHHH
Confidence 99876543 33344455789999999999863 6789999999999999999999999963 233332222
Q ss_pred hcccccccccccCCCCCCCCC--hhhHHHHHHHHHHccccCCCCCCC---HHHHHHH
Q 003605 632 LLTSREGLERIIDPSLGNDVP--FDSVAKVAAIASMCVQPEVQHRPF---MGEVVQA 683 (808)
Q Consensus 632 ~~~~~~~l~~ivD~~l~~~~~--~~~~~~l~~Li~~Cl~~dP~~RPs---m~eVl~~ 683 (808)
++.-.+. -.+| .+.+....+||++.+. +++.|-. +.++-.+
T Consensus 293 Im~hk~~----------l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~H 338 (1317)
T KOG0612|consen 293 IMNHKES----------LSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKNH 338 (1317)
T ss_pred Hhchhhh----------cCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHhC
Confidence 2222111 1122 2345667778877654 6777776 7777654
No 380
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1.2e-30 Score=281.24 Aligned_cols=255 Identities=26% Similarity=0.386 Sum_probs=194.7
Q ss_pred CCcceeeeeeecCcEEEEEEE-eeCCCEEEEEEee--cccch-----hhHHHHHHHHHHhhcccccceeEEeeee-eccc
Q 003605 409 GNFDASRILGEGGFGLVYSGV-LDDGTKVAVKVLK--RVDQQ-----GGREFLAEVEMLSRLHHRNLVKLIGICI-EEQA 479 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~-l~dg~~VAVK~lk--~~~~~-----~~~~f~~Ei~iL~~L~HpNIV~L~g~~~-~~~~ 479 (808)
++|-+.++||+|||+.||||. +...+.||||+-. +.... -.+...+|.+|...|.|+.||++|+|+. +.+.
T Consensus 463 ~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfslDtds 542 (775)
T KOG1151|consen 463 DRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSLDTDS 542 (775)
T ss_pred HHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeeecccc
Confidence 457778899999999999998 4567889999743 22111 1234678999999999999999999985 4577
Q ss_pred eEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecC---CCcceeccc
Q 003605 480 RCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEH---DFTPKVSDF 556 (808)
Q Consensus 480 ~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~---~~~vKL~DF 556 (808)
.|-|+|||++.+|+-||+. ...+++.++..|+.||+.||.||.+. +++|||-||||.||||.+ -|.+||+||
T Consensus 543 FCTVLEYceGNDLDFYLKQ----hklmSEKEARSIiMQiVnAL~YLNEi-kpPIIHYDLKPgNILLv~GtacGeIKITDF 617 (775)
T KOG1151|consen 543 FCTVLEYCEGNDLDFYLKQ----HKLMSEKEARSIIMQIVNALKYLNEI-KPPIIHYDLKPGNILLVNGTACGEIKITDF 617 (775)
T ss_pred ceeeeeecCCCchhHHHHh----hhhhhHHHHHHHHHHHHHHHHHHhcc-CCCeeeeccCCccEEEecCcccceeEeeec
Confidence 8999999999999999963 45689999999999999999999988 588999999999999954 478999999
Q ss_pred ccccccccccccc-----cccccccccccccchhhhcC----CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHH
Q 003605 557 GLARSAMDEESRH-----ISTRVMGTFGYVAPEYAMTG----HLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVA 627 (808)
Q Consensus 557 GLa~~~~~~~~~~-----~~~~~~Gt~~Y~APE~l~~~----~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~ 627 (808)
||++.+.++...+ .+....||.+|++||.+.-+ +.+.|.||||.|||+|..+.|+.||..... +.++..
T Consensus 618 GLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqs--QQdILq 695 (775)
T KOG1151|consen 618 GLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQS--QQDILQ 695 (775)
T ss_pred chhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchh--HHHHHh
Confidence 9999765544332 33456799999999987643 578999999999999999999999975332 222222
Q ss_pred hhhhhcccccccccccCCCCCCCCC-hhhHHHHHHHHHHccccCCCCCCCHHHHH
Q 003605 628 WARPLLTSREGLERIIDPSLGNDVP-FDSVAKVAAIASMCVQPEVQHRPFMGEVV 681 (808)
Q Consensus 628 w~~~~~~~~~~l~~ivD~~l~~~~~-~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl 681 (808)
... |+...-....+ .....+...+|++||+..-++|....++.
T Consensus 696 eNT-----------IlkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 696 ENT-----------ILKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred hhc-----------hhcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence 211 11111000011 12345677899999999999997666553
No 381
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=2.3e-30 Score=277.55 Aligned_cols=241 Identities=23% Similarity=0.320 Sum_probs=194.1
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc---chhhHHHHHHHHHHhhc-ccccceeEEeeeeeccceEEE
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD---QQGGREFLAEVEMLSRL-HHRNLVKLIGICIEEQARCLV 483 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~---~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~~~~~~~~~LV 483 (808)
.+|+...+||+|+||+|.+|.-+ +.+.+|||+|++.- ....+--+.|-++|... +-|.+++|..++..-+.+|+|
T Consensus 349 tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyFV 428 (683)
T KOG0696|consen 349 TDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYFV 428 (683)
T ss_pred cccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheeeE
Confidence 46999999999999999999865 56789999998531 22223345566777665 578899999999999999999
Q ss_pred EeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccc
Q 003605 484 YELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAM 563 (808)
Q Consensus 484 ~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~ 563 (808)
|||+.+|+|-.++++.. .+.+..+.-+|..||-||-+||+++ ||.||||.+|||||.+|.+||+|||+++.-.
T Consensus 429 MEyvnGGDLMyhiQQ~G----kFKEp~AvFYAaEiaigLFFLh~kg---IiYRDLKLDNvmLd~eGHiKi~DFGmcKEni 501 (683)
T KOG0696|consen 429 MEYVNGGDLMYHIQQVG----KFKEPVAVFYAAEIAIGLFFLHSKG---IIYRDLKLDNVMLDSEGHIKIADFGMCKENI 501 (683)
T ss_pred EEEecCchhhhHHHHhc----ccCCchhhhhhHHHHHHhhhhhcCC---eeeeeccccceEeccCCceEeeecccccccc
Confidence 99999999999997543 3556678889999999999999998 9999999999999999999999999998543
Q ss_pred cccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccccccccccc
Q 003605 564 DEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERII 643 (808)
Q Consensus 564 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~iv 643 (808)
-.+ ..+....||+.|+|||++..+.|+...|.|||||+||||+.|+.||+..+. . +....|.
T Consensus 502 ~~~--~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGeDE---~-------------elF~aI~ 563 (683)
T KOG0696|consen 502 FDG--VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDE---D-------------ELFQAIM 563 (683)
T ss_pred cCC--cceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCCCH---H-------------HHHHHHH
Confidence 222 233457899999999999999999999999999999999999999986432 1 1122222
Q ss_pred CCCCCCCCChhhHHHHHHHHHHccccCCCCCCC
Q 003605 644 DPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPF 676 (808)
Q Consensus 644 D~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs 676 (808)
+.. -.++...+.+.+.|....+.+.|.+|..
T Consensus 564 ehn--vsyPKslSkEAv~ickg~ltK~P~kRLG 594 (683)
T KOG0696|consen 564 EHN--VSYPKSLSKEAVAICKGLLTKHPGKRLG 594 (683)
T ss_pred Hcc--CcCcccccHHHHHHHHHHhhcCCccccC
Confidence 222 2355566678888999999999999953
No 382
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.96 E-value=8.9e-30 Score=287.85 Aligned_cols=241 Identities=24% Similarity=0.277 Sum_probs=192.9
Q ss_pred HhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccchhhHHHHHHHHHHhhc-ccccceeEEeeeeeccceEEEE
Q 003605 407 ATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQQGGREFLAEVEMLSRL-HHRNLVKLIGICIEEQARCLVY 484 (808)
Q Consensus 407 at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~~~~~~~~~LV~ 484 (808)
.++.|.....+|.|+|+.|-++... +++..+||++.+. ..+-.+|+.++... +|+||+++.+.|.+..+.++||
T Consensus 320 ~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~----~~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~ 395 (612)
T KOG0603|consen 320 FTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKR----ADDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVM 395 (612)
T ss_pred cchhhccccccCCCCccceeeeeccccccchhheecccc----ccccccccchhhhhcCCCcceeecceecCCceeeeee
Confidence 4677888888999999999888854 7788999999754 23345678777776 6999999999999999999999
Q ss_pred eecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeee-cCCCcceecccccccccc
Q 003605 485 ELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILL-EHDFTPKVSDFGLARSAM 563 (808)
Q Consensus 485 Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILL-d~~~~vKL~DFGLa~~~~ 563 (808)
|++.++-|.+.+... +....++..|+.+++.|+.|||+++ ||||||||+|||+ ++.++++|+|||.++...
T Consensus 396 e~l~g~ell~ri~~~-----~~~~~e~~~w~~~lv~Av~~LH~~g---vvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~ 467 (612)
T KOG0603|consen 396 ELLDGGELLRRIRSK-----PEFCSEASQWAAELVSAVDYLHEQG---VVHRDLKPGNILLDGSAGHLRLTYFGFWSELE 467 (612)
T ss_pred hhccccHHHHHHHhc-----chhHHHHHHHHHHHHHHHHHHHhcC---eeecCCChhheeecCCCCcEEEEEechhhhCc
Confidence 999998777776421 2222677789999999999999998 9999999999999 588999999999998654
Q ss_pred cccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccccccccccc
Q 003605 564 DEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERII 643 (808)
Q Consensus 564 ~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~iv 643 (808)
.. ....+-|..|.|||++....|++++|+||||++||+|++|+.||...... .++ +..+-
T Consensus 468 ~~-----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~--~ei-------------~~~i~ 527 (612)
T KOG0603|consen 468 RS-----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAG--IEI-------------HTRIQ 527 (612)
T ss_pred hh-----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCch--HHH-------------HHhhc
Confidence 32 22335678999999999999999999999999999999999999753321 111 11111
Q ss_pred CCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 644 DPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 644 D~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
.+.+....+....+|+.+||+.||.+|++|.++...
T Consensus 528 ----~~~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~h 563 (612)
T KOG0603|consen 528 ----MPKFSECVSDEAKDLLQQLLQVDPALRLGADEIGAH 563 (612)
T ss_pred ----CCccccccCHHHHHHHHHhccCChhhCcChhhhccC
Confidence 122224455678899999999999999999998654
No 383
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.96 E-value=2.1e-29 Score=245.78 Aligned_cols=264 Identities=22% Similarity=0.267 Sum_probs=191.8
Q ss_pred CcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc--cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEee
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV--DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~--~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
+|+..++||+|.||+||||+.. +++.||+|+++-. ++.--...++||-+|+.++|+|||++++....+..+-||+||
T Consensus 3 ~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe~ 82 (292)
T KOG0662|consen 3 KYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEF 82 (292)
T ss_pred chHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHHH
Confidence 4556678999999999999965 6889999998742 222235678999999999999999999999999999999999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEE 566 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~ 566 (808)
|. .+|..+.. .-+..++.+....++.|+++||.|.|+++ +.||||||.|.||+.+|+.|++|||+++.+.-.-
T Consensus 83 cd-qdlkkyfd---slng~~d~~~~rsfmlqllrgl~fchshn---vlhrdlkpqnllin~ngelkladfglarafgipv 155 (292)
T KOG0662|consen 83 CD-QDLKKYFD---SLNGDLDPEIVRSFMLQLLRGLGFCHSHN---VLHRDLKPQNLLINRNGELKLADFGLARAFGIPV 155 (292)
T ss_pred hh-HHHHHHHH---hcCCcCCHHHHHHHHHHHHhhhhhhhhhh---hhhccCCcceEEeccCCcEEecccchhhhcCCce
Confidence 95 47777664 33446888999999999999999999998 9999999999999999999999999998764221
Q ss_pred ccccccccccccccccchhhhcCC-CccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhccc--ccccccc
Q 003605 567 SRHISTRVMGTFGYVAPEYAMTGH-LLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLLTS--REGLERI 642 (808)
Q Consensus 567 ~~~~~~~~~Gt~~Y~APE~l~~~~-~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~~~--~~~l~~i 642 (808)
. -....+-|.+|.+|.++.+.+ |+...|+||-|||+.||.. |+.-|...+..++..-+-|......+ ...+.++
T Consensus 156 -r-cysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wps~t~l 233 (292)
T KOG0662|consen 156 -R-CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWPSMTKL 233 (292)
T ss_pred -E-eeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCCccccC
Confidence 1 123345689999999998765 6788899999999999998 55545433322221112222211111 1122233
Q ss_pred cCCCCCCCCCh---------hhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 643 IDPSLGNDVPF---------DSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 643 vD~~l~~~~~~---------~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
-|-....-++. .....=.++....+.-+|.+|.++++.++
T Consensus 234 pdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 234 PDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred CCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 33222111211 11223356777777789999998887654
No 384
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.96 E-value=1.1e-29 Score=272.19 Aligned_cols=262 Identities=24% Similarity=0.325 Sum_probs=199.2
Q ss_pred HhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccchhhHHHHHHHHHHhhcc-c-cc----ceeEEeeeeeccc
Q 003605 407 ATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQQGGREFLAEVEMLSRLH-H-RN----LVKLIGICIEEQA 479 (808)
Q Consensus 407 at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~-H-pN----IV~L~g~~~~~~~ 479 (808)
.+++|.+..++|+|.||.|-+.... .+..||||+++..... .+..+-|+++|++|. + |+ +|++.+|+.-.++
T Consensus 87 l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~kY-reAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrgh 165 (415)
T KOG0671|consen 87 LTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDKY-REAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGH 165 (415)
T ss_pred cccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHHH-hhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCc
Confidence 3789999999999999999998865 5789999999875433 345677999999994 2 22 7888899999999
Q ss_pred eEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecC------------
Q 003605 480 RCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEH------------ 547 (808)
Q Consensus 480 ~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~------------ 547 (808)
.|+|+|.+ +-|+.++|..+ .-.++.-..+..|+.|++++++|||+.+ ++|-||||+|||+.+
T Consensus 166 iCivfell-G~S~~dFlk~N--~y~~fpi~~ir~m~~QL~~sv~fLh~~k---l~HTDLKPENILfvss~~~~~~~~k~~ 239 (415)
T KOG0671|consen 166 ICIVFELL-GLSTFDFLKEN--NYIPFPIDHIRHMGYQLLESVAFLHDLK---LTHTDLKPENILFVSSEYFKTYNPKKK 239 (415)
T ss_pred eEEEEecc-ChhHHHHhccC--CccccchHHHHHHHHHHHHHHHHHHhcc---eeecCCChheEEEeccceEEEeccCCc
Confidence 99999999 56999999743 3346777899999999999999999998 999999999999832
Q ss_pred --------CCcceecccccccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCC
Q 003605 548 --------DFTPKVSDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQP 619 (808)
Q Consensus 548 --------~~~vKL~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~ 619 (808)
+..+||+|||.|....... ..++.|..|+|||++.+-.++..+||||+||||.||.||..-|.....
T Consensus 240 ~~~~r~~ks~~I~vIDFGsAtf~~e~h-----s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen 314 (415)
T KOG0671|consen 240 VCFIRPLKSTAIKVIDFGSATFDHEHH-----STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHEN 314 (415)
T ss_pred cceeccCCCcceEEEecCCcceeccCc-----ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCc
Confidence 3458999999997532221 456789999999999999999999999999999999999998875542
Q ss_pred CCcchhHHhhhhhcc-------ccc---------cc-----------ccccCCC--C--CCCCChhhHHHHHHHHHHccc
Q 003605 620 PGQENLVAWARPLLT-------SRE---------GL-----------ERIIDPS--L--GNDVPFDSVAKVAAIASMCVQ 668 (808)
Q Consensus 620 ~~~~~lv~w~~~~~~-------~~~---------~l-----------~~ivD~~--l--~~~~~~~~~~~l~~Li~~Cl~ 668 (808)
. +.|. ..+.++. .+. .+ ....++. + .......+..+|.+|+..||.
T Consensus 315 ~--EHLa-MMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~ckpl~~~~~~~d~e~~~LfDLl~~mL~ 391 (415)
T KOG0671|consen 315 L--EHLA-MMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEPCKPLKKYMLQDDLEHVQLFDLLRRMLE 391 (415)
T ss_pred H--HHHH-HHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcCCccHHHHhccCcHHHhHHHHHHHHHHc
Confidence 2 2221 1100000 000 00 0000000 0 011234567789999999999
Q ss_pred cCCCCCCCHHHHHHH
Q 003605 669 PEVQHRPFMGEVVQA 683 (808)
Q Consensus 669 ~dP~~RPsm~eVl~~ 683 (808)
.||.+|+|++|+++.
T Consensus 392 fDP~~RiTl~EAL~H 406 (415)
T KOG0671|consen 392 FDPARRITLREALSH 406 (415)
T ss_pred cCccccccHHHHhcC
Confidence 999999999998764
No 385
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.96 E-value=1.5e-29 Score=277.43 Aligned_cols=245 Identities=26% Similarity=0.366 Sum_probs=194.1
Q ss_pred eeeeeecCcEEEEEEEee-CCCEEEEEEeecc--cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecCCC
Q 003605 414 SRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV--DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIPNG 490 (808)
Q Consensus 414 ~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~--~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~~G 490 (808)
.++||.|-||+||-|+.+ +|+.||||++.+. ....+.++.+|+.||+.++||.||.|...|+..+..+.|||-+. |
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~-G 647 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLH-G 647 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhc-c
Confidence 479999999999999975 8999999999753 34455789999999999999999999999999999999999995 5
Q ss_pred CccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCC---Ccceecccccccccccccc
Q 003605 491 SVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHD---FTPKVSDFGLARSAMDEES 567 (808)
Q Consensus 491 sL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~---~~vKL~DFGLa~~~~~~~~ 567 (808)
+..+.+-. .+...|++..-..+..||+.||.|||.++ |+|+||||+||||.+. -.+||||||+||.+...
T Consensus 648 DMLEMILS--sEkgRL~er~TkFlvtQIL~ALr~LH~kn---IvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEk-- 720 (888)
T KOG4236|consen 648 DMLEMILS--SEKGRLPERITKFLVTQILVALRYLHFKN---IVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEK-- 720 (888)
T ss_pred hHHHHHHH--hhcccchHHHHHHHHHHHHHHHHHhhhcc---eeeccCCchheeeccCCCCCceeeccccceeecchh--
Confidence 55555432 33456888888888999999999999998 9999999999999653 47999999999987543
Q ss_pred cccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCC
Q 003605 568 RHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSL 647 (808)
Q Consensus 568 ~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l 647 (808)
.....++||+.|+|||++.++.|...-|+||.|||+|--++|..||... +++-+..+. ..-+.-+.-
T Consensus 721 -sFRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd-----EdIndQIQN-------AaFMyPp~P 787 (888)
T KOG4236|consen 721 -SFRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED-----EDINDQIQN-------AAFMYPPNP 787 (888)
T ss_pred -hhhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc-----cchhHHhhc-------cccccCCCc
Confidence 3345688999999999999999999999999999999999999999642 222211110 000011110
Q ss_pred CCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 648 GNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 648 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
. .+.....+++|...|+..-++|-+..+-+..
T Consensus 788 W----~eis~~AidlIn~LLqVkm~kRysvdk~lsh 819 (888)
T KOG4236|consen 788 W----SEISPEAIDLINNLLQVKMRKRYSVDKSLSH 819 (888)
T ss_pred h----hhcCHHHHHHHHHHHHHHHHHhcchHhhccc
Confidence 0 1334567889999999999999998877643
No 386
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.96 E-value=2.5e-29 Score=261.69 Aligned_cols=250 Identities=24% Similarity=0.279 Sum_probs=193.4
Q ss_pred HhCCccee-eeeeecCcEEEEEEEee-CCCEEEEEEeecccchhhHHHHHHHHHHhhc-ccccceeEEeeeee----ccc
Q 003605 407 ATGNFDAS-RILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQQGGREFLAEVEMLSRL-HHRNLVKLIGICIE----EQA 479 (808)
Q Consensus 407 at~~f~~~-~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~~~~----~~~ 479 (808)
.+++|.+. ++||-|-.|.|-.+..+ +|+.+|+|+|.+. ....+|+++.-+. .|+|||.++++|.+ ...
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds-----~KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc 133 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDS-----PKARREVELHWMASGHPHIVSIIDVYENSYQGRKC 133 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcC-----HHHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence 45556544 58999999999998865 7899999999753 3456788877666 59999999999864 357
Q ss_pred eEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecC---CCcceeccc
Q 003605 480 RCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEH---DFTPKVSDF 556 (808)
Q Consensus 480 ~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~---~~~vKL~DF 556 (808)
+++|||+|+||.|.+.+.+ +....+++.++-.|..||+.|+.|||+.+ |.||||||+|+|... |-.+||+||
T Consensus 134 LLiVmE~meGGeLfsriq~--~g~~afTErea~eI~~qI~~Av~~lH~~n---IAHRDlKpENLLyt~t~~na~lKLtDf 208 (400)
T KOG0604|consen 134 LLIVMECMEGGELFSRIQD--RGDQAFTEREASEIMKQIGLAVRYLHSMN---IAHRDLKPENLLYTTTSPNAPLKLTDF 208 (400)
T ss_pred eEeeeecccchHHHHHHHH--cccccchHHHHHHHHHHHHHHHHHHHhcc---hhhccCChhheeeecCCCCcceEeccc
Confidence 7899999999999999974 33457999999999999999999999998 999999999999954 457899999
Q ss_pred ccccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccc
Q 003605 557 GLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSR 636 (808)
Q Consensus 557 GLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~ 636 (808)
|+|+.... ...-...+-|+.|.|||++-..+|+..+|+||+||++|-|++|..||........ . .
T Consensus 209 GFAK~t~~---~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~ai-----------s-p 273 (400)
T KOG0604|consen 209 GFAKETQE---PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAI-----------S-P 273 (400)
T ss_pred ccccccCC---CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCccC-----------C-h
Confidence 99986432 1222345679999999999999999999999999999999999999964332100 0 0
Q ss_pred cccccccCCCCCCCCCh----hhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 637 EGLERIIDPSLGNDVPF----DSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 637 ~~l~~ivD~~l~~~~~~----~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
....+|.... -.++. +.++...++++..|..+|.+|.|+.|+...
T Consensus 274 gMk~rI~~gq--y~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~h 322 (400)
T KOG0604|consen 274 GMKRRIRTGQ--YEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMDH 322 (400)
T ss_pred hHHhHhhccC--ccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhcC
Confidence 0011111110 11222 335667889999999999999999999754
No 387
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.96 E-value=1.1e-29 Score=252.92 Aligned_cols=203 Identities=31% Similarity=0.406 Sum_probs=170.8
Q ss_pred CcceeeeeeecCcEEEEEEEee-CCCEEEEEEeec-ccchhhHHHHHHHHHHhhc-ccccceeEEeeeeeccceEEEEee
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKR-VDQQGGREFLAEVEMLSRL-HHRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~-~~~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
.......||+|++|.|-+-++. +|+.+|+|+++. .+.+..++.++|+.+..+. .+|.+|.|+|.+.+++..++.||.
T Consensus 47 ~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcME~ 126 (282)
T KOG0984|consen 47 DLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICMEL 126 (282)
T ss_pred hhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeHHH
Confidence 3334567999999999888754 899999999974 4566677888999987765 699999999999999999999999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEE 566 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~ 566 (808)
|. -||+.+-++.-..+..+.+..+-+||..+.+||.|||++- .+||||+||+|||||.+|++|+||||++-.+.+.-
T Consensus 127 M~-tSldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL--~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSi 203 (282)
T KOG0984|consen 127 MD-TSLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKL--SVIHRDVKPSNILINYDGQVKICDFGISGYLVDSI 203 (282)
T ss_pred hh-hhHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHh--hhhhccCCcceEEEccCCcEEEcccccceeehhhh
Confidence 94 5888887665556677999999999999999999999875 59999999999999999999999999997664322
Q ss_pred ccccccccccccccccchhhhc----CCCccccceeeHHHHHHHHHhCCCCCCCCC
Q 003605 567 SRHISTRVMGTFGYVAPEYAMT----GHLLVKSDVYSYGVVILELLSGRKPVDMTQ 618 (808)
Q Consensus 567 ~~~~~~~~~Gt~~Y~APE~l~~----~~~s~kSDVwSfGvvLlELlTG~~P~~~~~ 618 (808)
. .+...|-..|||||.+.. ..|+-||||||||+.+.||.+++.||+...
T Consensus 204 A---kt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~ 256 (282)
T KOG0984|consen 204 A---KTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWG 256 (282)
T ss_pred H---HHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccC
Confidence 1 122457788999998753 378899999999999999999999997544
No 388
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.96 E-value=5e-28 Score=239.94 Aligned_cols=210 Identities=37% Similarity=0.592 Sum_probs=182.3
Q ss_pred eeecCcEEEEEEEeeC-CCEEEEEEeecccch-hhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecCCCCccc
Q 003605 417 LGEGGFGLVYSGVLDD-GTKVAVKVLKRVDQQ-GGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIPNGSVES 494 (808)
Q Consensus 417 LG~G~fG~VYkg~l~d-g~~VAVK~lk~~~~~-~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~~GsL~~ 494 (808)
||+|.+|.||++...+ ++.+++|++...... ..+.+.+|++.+++++|++++++++++......++++||+.+++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 6899999999999764 899999999754332 35789999999999999999999999999889999999999999999
Q ss_pred cccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecC-CCcceecccccccccccccccccccc
Q 003605 495 HLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEH-DFTPKVSDFGLARSAMDEESRHISTR 573 (808)
Q Consensus 495 ~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~-~~~vKL~DFGLa~~~~~~~~~~~~~~ 573 (808)
++.... ..+++..++.++.+++++|+|||+.+ ++|+||++.||+++. ++.++|+|||.+........ ....
T Consensus 81 ~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~~~---~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--~~~~ 152 (215)
T cd00180 81 LLKENE---GKLSEDEILRILLQILEGLEYLHSNG---IIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--LLKT 152 (215)
T ss_pred HHHhcc---CCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc--hhhc
Confidence 986321 36899999999999999999999998 999999999999999 89999999999876533221 1223
Q ss_pred cccccccccchhhhcC-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCCCCC
Q 003605 574 VMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGNDVP 652 (808)
Q Consensus 574 ~~Gt~~Y~APE~l~~~-~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~~~~ 652 (808)
..+...|++||.+... ..+.+.|+|++|+++++|
T Consensus 153 ~~~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l--------------------------------------------- 187 (215)
T cd00180 153 IVGTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL--------------------------------------------- 187 (215)
T ss_pred ccCCCCccChhHhcccCCCCchhhhHHHHHHHHHH---------------------------------------------
Confidence 4577899999998877 788999999999999999
Q ss_pred hhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 653 FDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 653 ~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
..+.+++..|++.+|++||++.++++.
T Consensus 188 ----~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 ----PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred ----HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 467889999999999999999999865
No 389
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96 E-value=6.9e-29 Score=276.85 Aligned_cols=205 Identities=27% Similarity=0.371 Sum_probs=170.4
Q ss_pred CcceeeeeeecCcEEEEEEE-eeCCCEEEEEEeeccc---chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEe
Q 003605 410 NFDASRILGEGGFGLVYSGV-LDDGTKVAVKVLKRVD---QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYE 485 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~-l~dg~~VAVK~lk~~~---~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~E 485 (808)
-|..++.||-|+||+|.++. .++...+|+|.|++.+ ........+|-.||..-..+-||+|+..|.+++++|+|||
T Consensus 630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVMd 709 (1034)
T KOG0608|consen 630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 709 (1034)
T ss_pred ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEEe
Confidence 47788999999999999987 4456678999997643 3344567789999999999999999999999999999999
Q ss_pred ecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccc--
Q 003605 486 LIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAM-- 563 (808)
Q Consensus 486 y~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~-- 563 (808)
|+++|++-.+|.. ...+.++.+..++.+++.|+++.|..+ +|||||||+|||||.+|.+||+|||||.-+.
T Consensus 710 YIPGGDmMSLLIr----mgIFeE~LARFYIAEltcAiesVHkmG---FIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWT 782 (1034)
T KOG0608|consen 710 YIPGGDMMSLLIR----MGIFEEDLARFYIAELTCAIESVHKMG---FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 782 (1034)
T ss_pred ccCCccHHHHHHH----hccCHHHHHHHHHHHHHHHHHHHHhcc---ceecccCccceEEccCCceeeeeccccccceec
Confidence 9999999999853 234666666677778999999999998 9999999999999999999999999984221
Q ss_pred -------cccc-------------------------------cccccccccccccccchhhhcCCCccccceeeHHHHHH
Q 003605 564 -------DEES-------------------------------RHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVIL 605 (808)
Q Consensus 564 -------~~~~-------------------------------~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLl 605 (808)
..+. +...-..+||..|+|||++....++..+|.||.|||||
T Consensus 783 HdskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~ 862 (1034)
T KOG0608|consen 783 HDSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILY 862 (1034)
T ss_pred cccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHH
Confidence 1000 00001257999999999999999999999999999999
Q ss_pred HHHhCCCCCCCCCCCC
Q 003605 606 ELLSGRKPVDMTQPPG 621 (808)
Q Consensus 606 ELlTG~~P~~~~~~~~ 621 (808)
||+.|+.||....+.+
T Consensus 863 em~~g~~pf~~~tp~~ 878 (1034)
T KOG0608|consen 863 EMLVGQPPFLADTPGE 878 (1034)
T ss_pred HHhhCCCCccCCCCCc
Confidence 9999999998766543
No 390
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=2e-28 Score=257.07 Aligned_cols=248 Identities=22% Similarity=0.347 Sum_probs=199.1
Q ss_pred hCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeec---ccchhhHHHHHHHHHHhhc-ccccceeEEeeeeeccceEE
Q 003605 408 TGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKR---VDQQGGREFLAEVEMLSRL-HHRNLVKLIGICIEEQARCL 482 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~---~~~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~~~~~~~~~L 482 (808)
.++|++.++||+|+|.+|..+++. +.+.+|+|++++ ++.+..+=.+.|-.+..+- +||.+|-|..++..+..+++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 468999999999999999999875 678899999985 2333344455677777765 79999999999999999999
Q ss_pred EEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccc
Q 003605 483 VYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSA 562 (808)
Q Consensus 483 V~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~ 562 (808)
|.||+++|+|--+++ ....|.++.+..+...|.-||.|||+.+ ||.||||.+|+|||..+.+||+|||+++..
T Consensus 329 vieyv~ggdlmfhmq----rqrklpeeharfys~ei~lal~flh~rg---iiyrdlkldnvlldaeghikltdygmcke~ 401 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQ----RQRKLPEEHARFYSAEICLALNFLHERG---IIYRDLKLDNVLLDAEGHIKLTDYGMCKEG 401 (593)
T ss_pred EEEEecCcceeeehh----hhhcCcHHHhhhhhHHHHHHHHHHhhcC---eeeeeccccceEEccCCceeecccchhhcC
Confidence 999999999988885 3346888988889999999999999999 999999999999999999999999999864
Q ss_pred ccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCC-CcchhHHhhhhhccccccccc
Q 003605 563 MDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPP-GQENLVAWARPLLTSREGLER 641 (808)
Q Consensus 563 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~-~~~~lv~w~~~~~~~~~~l~~ 641 (808)
... ...+...+||+.|+|||++.+..|....|.|++||+++||+.|+.||+..... ..++-.++.-..+
T Consensus 402 l~~--gd~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvi-------- 471 (593)
T KOG0695|consen 402 LGP--GDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVI-------- 471 (593)
T ss_pred CCC--CcccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHH--------
Confidence 432 23345678999999999999999999999999999999999999999864432 2233333332222
Q ss_pred ccCCCCCCCCChhhHHHHHHHHHHccccCCCCCC
Q 003605 642 IIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRP 675 (808)
Q Consensus 642 ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RP 675 (808)
+...+ .++.....+...+++.-|++||.+|.
T Consensus 472 -lekqi--riprslsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 472 -LEKQI--RIPRSLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred -hhhcc--cccceeehhhHHHHHHhhcCCcHHhc
Confidence 22222 12333445677888999999999985
No 391
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.95 E-value=1e-28 Score=284.46 Aligned_cols=247 Identities=27% Similarity=0.354 Sum_probs=187.1
Q ss_pred cceeeeeeecCcEE-EEEEEeeCCCEEEEEEeecccchhhHHHHHHHHHHhhc-ccccceeEEeeeeeccceEEEEeecC
Q 003605 411 FDASRILGEGGFGL-VYSGVLDDGTKVAVKVLKRVDQQGGREFLAEVEMLSRL-HHRNLVKLIGICIEEQARCLVYELIP 488 (808)
Q Consensus 411 f~~~~~LG~G~fG~-VYkg~l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~~~~~~~~~LV~Ey~~ 488 (808)
|...+++|.|+-|+ ||+|.++ |+.||||++-. .-..-..+||..|+.- +|+|||++++.-.++...|++.|.|
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~---e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC- 585 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVYE-GREVAVKRLLE---EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELC- 585 (903)
T ss_pred eccHHHcccCCCCcEEEEEeeC-CceehHHHHhh---HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHh-
Confidence 44557899999885 7999997 89999999853 2234567899999988 5999999999988889999999999
Q ss_pred CCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecC-----CCcceecccccccccc
Q 003605 489 NGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEH-----DFTPKVSDFGLARSAM 563 (808)
Q Consensus 489 ~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~-----~~~vKL~DFGLa~~~~ 563 (808)
..+|++++...........-...+.+..|++.||++||+.+ ||||||||.||||+. ..+++|+|||+++...
T Consensus 586 ~~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~---iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~ 662 (903)
T KOG1027|consen 586 ACSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLK---IVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLA 662 (903)
T ss_pred hhhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcc---cccccCCCceEEEEccCCCcceeEEecccccccccC
Confidence 56999999753111111111345778889999999999987 999999999999965 3579999999999775
Q ss_pred ccccc-ccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhC-CCCCCCCCCCCcchhHHhhhhhccccccccc
Q 003605 564 DEESR-HISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSG-RKPVDMTQPPGQENLVAWARPLLTSREGLER 641 (808)
Q Consensus 564 ~~~~~-~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG-~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ 641 (808)
..... .......||-||+|||.+....-+.+.||||+|||+|..++| .+||...... +.+ ++.....+..
T Consensus 663 ~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R-~~N-------Il~~~~~L~~ 734 (903)
T KOG1027|consen 663 GGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLER-QAN-------ILTGNYTLVH 734 (903)
T ss_pred CCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHh-hhh-------hhcCccceee
Confidence 43322 123456799999999999998888899999999999999995 8999643211 111 1222222221
Q ss_pred ccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 642 IIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 642 ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
+.. ..++ +..+||.+|++.+|..||++.+|+.
T Consensus 735 L~~-------~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 735 LEP-------LPDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred ecc-------CchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 110 1112 6789999999999999999999974
No 392
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.95 E-value=1e-29 Score=258.99 Aligned_cols=266 Identities=21% Similarity=0.324 Sum_probs=192.2
Q ss_pred cceeeeeeecCcEEEEEEEee-CCCEEEEEEeec-cc-chhhHHHHHHHHHHhhcccccceeEEeeeeec--------cc
Q 003605 411 FDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKR-VD-QQGGREFLAEVEMLSRLHHRNLVKLIGICIEE--------QA 479 (808)
Q Consensus 411 f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~-~~-~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~--------~~ 479 (808)
|+...+||+|.||.||+|+.+ .|+.||+|++-- .. ..--...++|+++|..|+|+|++.++..|... ..
T Consensus 19 yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t 98 (376)
T KOG0669|consen 19 YEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRAT 98 (376)
T ss_pred HHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccce
Confidence 444568999999999999965 577889887532 11 11224567999999999999999999998542 34
Q ss_pred eEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccc
Q 003605 480 RCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLA 559 (808)
Q Consensus 480 ~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa 559 (808)
.+|||++|+. +|.-.|. .....++..++.+++.++..||.|+|... |+|||+|+.|+||+.++.+||+|||++
T Consensus 99 ~ylVf~~ceh-DLaGlLs---n~~vr~sls~Ikk~Mk~Lm~GL~~iHr~k---ilHRDmKaaNvLIt~dgilklADFGla 171 (376)
T KOG0669|consen 99 FYLVFDFCEH-DLAGLLS---NRKVRFSLSEIKKVMKGLMNGLYYIHRNK---ILHRDMKAANVLITKDGILKLADFGLA 171 (376)
T ss_pred eeeeHHHhhh-hHHHHhc---CccccccHHHHHHHHHHHHHHHHHHHHhh---HHhhcccHhhEEEcCCceEEeeccccc
Confidence 7999999975 7777774 23356888999999999999999999887 999999999999999999999999999
Q ss_pred cccccccc--cccccccccccccccchhhhc-CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHh--------
Q 003605 560 RSAMDEES--RHISTRVMGTFGYVAPEYAMT-GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAW-------- 628 (808)
Q Consensus 560 ~~~~~~~~--~~~~~~~~Gt~~Y~APE~l~~-~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w-------- 628 (808)
+.+..... ....+..+-|..|+.||.+.+ +.|+.+.|||.-|||+.||+||.+-+.......+..++..
T Consensus 172 r~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tke 251 (376)
T KOG0669|consen 172 RAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKE 251 (376)
T ss_pred cceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcc
Confidence 86643222 222345567999999999886 4689999999999999999999887765433222222211
Q ss_pred hhhhccccccccccc-CCCCCCCCC--hh------hHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 629 ARPLLTSREGLERII-DPSLGNDVP--FD------SVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 629 ~~~~~~~~~~l~~iv-D~~l~~~~~--~~------~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
+|+.+..-+....+- .|.-.+.+. .+ ...+.++|+..++..||.+|+...+++..
T Consensus 252 vWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~alnh 315 (376)
T KOG0669|consen 252 VWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALNH 315 (376)
T ss_pred cCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhch
Confidence 111111111111110 111111110 11 12367789999999999999999998754
No 393
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=4.8e-29 Score=256.16 Aligned_cols=264 Identities=24% Similarity=0.346 Sum_probs=194.9
Q ss_pred ceeeeeeecCcEEEEEEEee-CCCEEEEEEeecc--cchhhHHHHHHHHHHhhcccccceeEEeeeeec-----cceEEE
Q 003605 412 DASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRV--DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEE-----QARCLV 483 (808)
Q Consensus 412 ~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~--~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~-----~~~~LV 483 (808)
+..+-||-|+||.||..+.. +|+.||.|++... +-...+++.+|+++|.-++|.|++..++..... .+.|.+
T Consensus 56 ~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV~ 135 (449)
T KOG0664|consen 56 QPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYVL 135 (449)
T ss_pred CCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHHH
Confidence 34578999999999998865 8999999998642 334567899999999999999999988876433 356888
Q ss_pred EeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccc
Q 003605 484 YELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAM 563 (808)
Q Consensus 484 ~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~ 563 (808)
+|.| ..+|...+ -....|+-+...-+..||++||.|||+.+ |.||||||.|.|++.|...|||||||++...
T Consensus 136 TELm-QSDLHKII----VSPQ~Ls~DHvKVFlYQILRGLKYLHsA~---ILHRDIKPGNLLVNSNCvLKICDFGLARvee 207 (449)
T KOG0664|consen 136 TELM-QSDLHKII----VSPQALTPDHVKVFVYQILRGLKYLHTAN---ILHRDIKPGNLLVNSNCILKICDFGLARTWD 207 (449)
T ss_pred HHHH-Hhhhhhee----ccCCCCCcchhhhhHHHHHhhhHHHhhcc---hhhccCCCccEEeccCceEEecccccccccc
Confidence 9988 44666665 33456888888889999999999999998 9999999999999999999999999999755
Q ss_pred cccccccccccccccccccchhhhc-CCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccc-------
Q 003605 564 DEESRHISTRVMGTFGYVAPEYAMT-GHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTS------- 635 (808)
Q Consensus 564 ~~~~~~~~~~~~Gt~~Y~APE~l~~-~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~------- 635 (808)
..+..+. +..+-|..|+|||++++ ++|+.+.||||.|||+.||+..+.-|....+..+.+++.-....-..
T Consensus 208 ~d~~~hM-TqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~EaMr~AC 286 (449)
T KOG0664|consen 208 QRDRLNM-THEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQEAMKYAC 286 (449)
T ss_pred hhhhhhh-HHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcHHHHHHHh
Confidence 4444443 44567899999999987 57899999999999999999998888766554333222111000000
Q ss_pred ccccccccC-----CCCC----CCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHH
Q 003605 636 REGLERIID-----PSLG----NDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQAL 684 (808)
Q Consensus 636 ~~~l~~ivD-----~~l~----~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~L 684 (808)
+.....++. +.+. -.-+.....+-+.+...++..||++|.+..+.+..+
T Consensus 287 EGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 287 EGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred hhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 000000111 1110 011123345667788899999999999988887665
No 394
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.95 E-value=3.2e-29 Score=274.61 Aligned_cols=241 Identities=24% Similarity=0.334 Sum_probs=196.2
Q ss_pred CcceeeeeeecCcEEEEEEEeeCCC-EEEEEEeec---ccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEe
Q 003605 410 NFDASRILGEGGFGLVYSGVLDDGT-KVAVKVLKR---VDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYE 485 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~dg~-~VAVK~lk~---~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~E 485 (808)
+++....||-|+||.|=.+..+... .+|+|++++ .+....+....|-.||...+.+.||+||-.|.+....||+||
T Consensus 421 dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLmE 500 (732)
T KOG0614|consen 421 DLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLME 500 (732)
T ss_pred hhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhHH
Confidence 4455567999999999988876433 488998875 445556778899999999999999999999999999999999
Q ss_pred ecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccc
Q 003605 486 LIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDE 565 (808)
Q Consensus 486 y~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~ 565 (808)
-|-+|.|+..|++ +..++..+...++..+.+|++|||+++ ||.|||||+|.+||.+|-+||.|||+|+.+...
T Consensus 501 aClGGElWTiLrd----Rg~Fdd~tarF~~acv~EAfeYLH~k~---iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g 573 (732)
T KOG0614|consen 501 ACLGGELWTILRD----RGSFDDYTARFYVACVLEAFEYLHRKG---IIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSG 573 (732)
T ss_pred hhcCchhhhhhhh----cCCcccchhhhhHHHHHHHHHHHHhcC---ceeccCChhheeeccCCceEEeehhhHHHhccC
Confidence 9999999999963 345788888888999999999999998 999999999999999999999999999987543
Q ss_pred cccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCC
Q 003605 566 ESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDP 645 (808)
Q Consensus 566 ~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~ 645 (808)
. .+-..+||+.|.|||++.+...+.+.|.||||+++|||++|..||...++-..-++ ++. .++.
T Consensus 574 ~---KTwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~------ILk---Gid~---- 637 (732)
T KOG0614|consen 574 R---KTWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNL------ILK---GIDK---- 637 (732)
T ss_pred C---ceeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHH------HHh---hhhh----
Confidence 2 33457899999999999999999999999999999999999999986554211111 111 1111
Q ss_pred CCCCCCChhhHHHHHHHHHHccccCCCCCCC
Q 003605 646 SLGNDVPFDSVAKVAAIASMCVQPEVQHRPF 676 (808)
Q Consensus 646 ~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPs 676 (808)
..+|........+++++.+..+|.+|-.
T Consensus 638 ---i~~Pr~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 638 ---IEFPRRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred ---hhcccccchhHHHHHHHHHhcCcHhhhc
Confidence 1233344456778999999999999975
No 395
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.95 E-value=5.3e-27 Score=238.25 Aligned_cols=199 Identities=36% Similarity=0.487 Sum_probs=171.7
Q ss_pred cceeeeeeecCcEEEEEEEeeC-CCEEEEEEeecccch-hhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecC
Q 003605 411 FDASRILGEGGFGLVYSGVLDD-GTKVAVKVLKRVDQQ-GGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIP 488 (808)
Q Consensus 411 f~~~~~LG~G~fG~VYkg~l~d-g~~VAVK~lk~~~~~-~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~ 488 (808)
|.+.+.||+|++|.||++...+ ++.+|+|.+...... ..+.+.+|++.+.+++|+|++++++++......++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 5667899999999999999874 889999999865444 57789999999999999999999999999899999999999
Q ss_pred CCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccccc
Q 003605 489 NGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESR 568 (808)
Q Consensus 489 ~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~ 568 (808)
+++|.+++.... ..+++...+.++.+++++|.|||+.+ ++|+||+++||+++.++.++|+|||++.........
T Consensus 81 ~~~L~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~lh~~~---i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~ 154 (225)
T smart00221 81 GGDLFDYLRKKG---GKLSEEEARFYLRQILEALEYLHSLG---IVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAA 154 (225)
T ss_pred CCCHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHhCC---eecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccc
Confidence 999999986322 11889999999999999999999987 999999999999999999999999998865433211
Q ss_pred ccccccccccccccchhh-hcCCCccccceeeHHHHHHHHHhCCCCCCC
Q 003605 569 HISTRVMGTFGYVAPEYA-MTGHLLVKSDVYSYGVVILELLSGRKPVDM 616 (808)
Q Consensus 569 ~~~~~~~Gt~~Y~APE~l-~~~~~s~kSDVwSfGvvLlELlTG~~P~~~ 616 (808)
......++..|++||.+ ....++.++|||+||++++||++|+.||+.
T Consensus 155 -~~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 155 -LLKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred -cccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 22334577889999998 666778899999999999999999999954
No 396
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93 E-value=1.2e-25 Score=246.59 Aligned_cols=133 Identities=26% Similarity=0.409 Sum_probs=112.9
Q ss_pred hCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccchhhHHHHHHHHHHhhcc-----c---ccceeEEeeeee--
Q 003605 408 TGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQQGGREFLAEVEMLSRLH-----H---RNLVKLIGICIE-- 476 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~-----H---pNIV~L~g~~~~-- 476 (808)
.++|.+.++||.|.|++||++... +.+.||+|+.+.. +.-.+..+.||++|++++ | .+||+|+++|..
T Consensus 77 ~gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsG 155 (590)
T KOG1290|consen 77 GGRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSG 155 (590)
T ss_pred CceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecC
Confidence 478999999999999999999854 6788999999853 344567789999999984 2 469999999975
Q ss_pred --ccceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeec
Q 003605 477 --EQARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLE 546 (808)
Q Consensus 477 --~~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd 546 (808)
+.+.|||+|++ +.+|..+|..... +.+......+|+.||+.||.|||+.+ .|||-||||+||||.
T Consensus 156 pNG~HVCMVfEvL-GdnLLklI~~s~Y--rGlpl~~VK~I~~qvL~GLdYLH~ec--gIIHTDlKPENvLl~ 222 (590)
T KOG1290|consen 156 PNGQHVCMVFEVL-GDNLLKLIKYSNY--RGLPLSCVKEICRQVLTGLDYLHREC--GIIHTDLKPENVLLC 222 (590)
T ss_pred CCCcEEEEEehhh-hhHHHHHHHHhCC--CCCcHHHHHHHHHHHHHHHHHHHHhc--CccccCCCcceeeee
Confidence 45789999999 7799999875443 35778899999999999999999998 799999999999983
No 397
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.93 E-value=5.4e-26 Score=234.12 Aligned_cols=261 Identities=22% Similarity=0.347 Sum_probs=194.7
Q ss_pred HhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccchhhHHHHHHHHHHhhc-ccccceeEEee-eeeccceEEE
Q 003605 407 ATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQQGGREFLAEVEMLSRL-HHRNLVKLIGI-CIEEQARCLV 483 (808)
Q Consensus 407 at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~-~~~~~~~~LV 483 (808)
..+.|++.+.||+|.||.+-++.++ ..+.+++|.+.+. ....++|.+|...--.| .|.||+.-++. |...+.++++
T Consensus 22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p-~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~ 100 (378)
T KOG1345|consen 22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRP-QTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFV 100 (378)
T ss_pred hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcc-hhhHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEe
Confidence 4467888999999999999999977 5688999988652 34568999998876666 59999998876 5666788999
Q ss_pred EeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeee-cC-CCcceecccccccc
Q 003605 484 YELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILL-EH-DFTPKVSDFGLARS 561 (808)
Q Consensus 484 ~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILL-d~-~~~vKL~DFGLa~~ 561 (808)
+||++.|+|.+.+.. ..+.+....+++.|++.||.|+|+++ +||||||.+|||| +. ..++||||||+.+.
T Consensus 101 qE~aP~gdL~snv~~-----~GigE~~~K~v~~ql~SAi~fMHskn---lVHRdlK~eNiLif~~df~rvKlcDFG~t~k 172 (378)
T KOG1345|consen 101 QEFAPRGDLRSNVEA-----AGIGEANTKKVFAQLLSAIEFMHSKN---LVHRDLKAENILIFDADFYRVKLCDFGLTRK 172 (378)
T ss_pred eccCccchhhhhcCc-----ccccHHHHHHHHHHHHHHHHHhhccc---hhhcccccceEEEecCCccEEEeeecccccc
Confidence 999999999998842 45778888999999999999999998 9999999999999 33 35899999999875
Q ss_pred cccccccccccccccccccccchhhhc---CC--CccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccc
Q 003605 562 AMDEESRHISTRVMGTFGYVAPEYAMT---GH--LLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSR 636 (808)
Q Consensus 562 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~---~~--~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~ 636 (808)
... ......-+..|.+||.... +. ....+|||.||+|++.++||+.||+... ......+.|..-.-...
T Consensus 173 ~g~-----tV~~~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~-~~d~~Y~~~~~w~~rk~ 246 (378)
T KOG1345|consen 173 VGT-----TVKYLEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKAS-IMDKPYWEWEQWLKRKN 246 (378)
T ss_pred cCc-----eehhhhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhh-ccCchHHHHHHHhcccC
Confidence 421 1122334567999997653 22 3567899999999999999999998433 23344444432111100
Q ss_pred cccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHhh
Q 003605 637 EGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLVCNEC 691 (808)
Q Consensus 637 ~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~~~~ 691 (808)
-.+ |..-+ ....++.++.++-+..++++|-...++.++......+.
T Consensus 247 ~~~-----P~~F~----~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~~w~E~ 292 (378)
T KOG1345|consen 247 PAL-----PKKFN----PFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKCLWKEK 292 (378)
T ss_pred ccC-----chhhc----ccCHHHHHHHHHhcCCcccccchhHHHHHHHHHHHHHh
Confidence 011 11111 12356778889999999999988888877776655544
No 398
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.93 E-value=2.1e-26 Score=253.18 Aligned_cols=275 Identities=21% Similarity=0.247 Sum_probs=206.3
Q ss_pred CCHHHHHHHhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccchhhHHHHHHHHHHhhcc------cccceeEE
Q 003605 399 FSASEIEKATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQQGGREFLAEVEMLSRLH------HRNLVKLI 471 (808)
Q Consensus 399 fs~~el~~at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~------HpNIV~L~ 471 (808)
|.+.--+....+|.+....|+|-|++|.+|... -|..||||+++.. +.-.+.=+.|++||.+|+ --|+++|+
T Consensus 422 Yrv~igE~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnN-E~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~ 500 (752)
T KOG0670|consen 422 YRVRIGELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNN-EVMHKTGLKELEILKKLNDADPEDKFHCLRLF 500 (752)
T ss_pred EEEehhhhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecc-hHHhhhhhHHHHHHHHhhccCchhhhHHHHHH
Confidence 444444556788999999999999999999865 5789999999853 444566678999999996 24899999
Q ss_pred eeeeeccceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCC-Cc
Q 003605 472 GICIEEQARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHD-FT 550 (808)
Q Consensus 472 g~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~-~~ 550 (808)
-.|...+++|||||-+ .-+|.+.|..+.. ...|.......++.|+.-||..|...+ |+|.||||.|||+++. ..
T Consensus 501 r~F~hknHLClVFE~L-slNLRevLKKyG~-nvGL~ikaVRsYaqQLflALklLK~c~---vlHaDIKPDNiLVNE~k~i 575 (752)
T KOG0670|consen 501 RHFKHKNHLCLVFEPL-SLNLREVLKKYGR-NVGLHIKAVRSYAQQLFLALKLLKKCG---VLHADIKPDNILVNESKNI 575 (752)
T ss_pred HHhhhcceeEEEehhh-hchHHHHHHHhCc-ccceeehHHHHHHHHHHHHHHHHHhcC---eeecccCccceEeccCcce
Confidence 9999999999999988 4699999987654 346888899999999999999999988 9999999999999876 56
Q ss_pred ceecccccccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhh-
Q 003605 551 PKVSDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWA- 629 (808)
Q Consensus 551 vKL~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~- 629 (808)
+||||||.|-.+.+... +....+..|.|||++.+-.|+...|+||.||.||||.||+.-|.....+....+..-+
T Consensus 576 LKLCDfGSA~~~~enei----tPYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~K 651 (752)
T KOG0670|consen 576 LKLCDFGSASFASENEI----TPYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELK 651 (752)
T ss_pred eeeccCccccccccccc----cHHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhc
Confidence 89999999976544322 2233456799999999999999999999999999999999988654432211111000
Q ss_pred ----hhhccccccccc--------------------------ccCC------CCCC--CCCh---hhHHHHHHHHHHccc
Q 003605 630 ----RPLLTSREGLER--------------------------IIDP------SLGN--DVPF---DSVAKVAAIASMCVQ 668 (808)
Q Consensus 630 ----~~~~~~~~~l~~--------------------------ivD~------~l~~--~~~~---~~~~~l~~Li~~Cl~ 668 (808)
..++....-.++ .+.| .|.. .++. .....|.+|+..|+.
T Consensus 652 Gk~p~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~ 731 (752)
T KOG0670|consen 652 GKFPNKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLI 731 (752)
T ss_pred CCCcHHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhc
Confidence 000000000000 1111 1111 1332 345678899999999
Q ss_pred cCCCCCCCHHHHHHH
Q 003605 669 PEVQHRPFMGEVVQA 683 (808)
Q Consensus 669 ~dP~~RPsm~eVl~~ 683 (808)
.||++|-+..|.++.
T Consensus 732 LdP~KRit~nqAL~H 746 (752)
T KOG0670|consen 732 LDPEKRITVNQALKH 746 (752)
T ss_pred cChhhcCCHHHHhcC
Confidence 999999999988753
No 399
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.92 E-value=2.8e-26 Score=258.63 Aligned_cols=254 Identities=24% Similarity=0.327 Sum_probs=202.6
Q ss_pred HhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEe
Q 003605 407 ATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYE 485 (808)
Q Consensus 407 at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~E 485 (808)
-.++|+....+|.|.||.|||++.. .++..|||.++-.......-..+|+-+++..+|+|||.++|.+...+..+++||
T Consensus 13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicME 92 (829)
T KOG0576|consen 13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICME 92 (829)
T ss_pred CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEE
Confidence 3567889999999999999999965 789999999986555556677889999999999999999999999999999999
Q ss_pred ecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccc
Q 003605 486 LIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDE 565 (808)
Q Consensus 486 y~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~ 565 (808)
||.+|+|++.-|. ..+|++.++..+.....+||+|||+.+ -+|||||-.|||+.+.+++|++|||.+..+..
T Consensus 93 ycgggslQdiy~~----TgplselqiayvcRetl~gl~ylhs~g---k~hRdiKGanilltd~gDvklaDfgvsaqita- 164 (829)
T KOG0576|consen 93 YCGGGSLQDIYHV----TGPLSELQIAYVCRETLQGLKYLHSQG---KIHRDIKGANILLTDEGDVKLADFGVSAQITA- 164 (829)
T ss_pred ecCCCcccceeee----cccchhHHHHHHHhhhhccchhhhcCC---cccccccccceeecccCceeecccCchhhhhh-
Confidence 9999999998863 347889999999999999999999998 79999999999999999999999999865432
Q ss_pred cccccccccccccccccchhhh---cCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccc
Q 003605 566 ESRHISTRVMGTFGYVAPEYAM---TGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERI 642 (808)
Q Consensus 566 ~~~~~~~~~~Gt~~Y~APE~l~---~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~i 642 (808)
.-.......||+.|||||+.. .+.|..++|||+.|+...||---+.|.....+. .. ..+++ + ..
T Consensus 165 -ti~KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpm--r~-----l~LmT-k----S~ 231 (829)
T KOG0576|consen 165 -TIAKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPM--RA-----LFLMT-K----SG 231 (829)
T ss_pred -hhhhhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchH--HH-----HHHhh-c----cC
Confidence 222334567999999999763 567899999999999999998777664321110 00 01111 1 11
Q ss_pred cCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 643 IDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 643 vD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
+++.-.++ .......+.++++.|+-++|++||+.+.+++
T Consensus 232 ~qpp~lkD-k~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 232 FQPPTLKD-KTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred CCCCcccC-CccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 22221111 1244567999999999999999999988764
No 400
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.92 E-value=7.6e-26 Score=251.58 Aligned_cols=196 Identities=20% Similarity=0.342 Sum_probs=165.0
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc--------chhhHHHHHHHHHHhhcc---cccceeEEeeeee
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD--------QQGGREFLAEVEMLSRLH---HRNLVKLIGICIE 476 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~--------~~~~~~f~~Ei~iL~~L~---HpNIV~L~g~~~~ 476 (808)
.+|...+.||+|+||.|+.++++ +...|+||.+.+.. ....-..-.||.||..|+ |+||++++++|++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 45888999999999999999987 55678999886421 111223556999999997 9999999999999
Q ss_pred ccceEEEEeecC-CCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecc
Q 003605 477 EQARCLVYELIP-NGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSD 555 (808)
Q Consensus 477 ~~~~~LV~Ey~~-~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~D 555 (808)
.+.+||++|-.. +-+|.+++. ....+++.+...|+.|++.|+++||+.+ |||||||-+||.+|.+|-+||+|
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE----~kp~m~E~eAk~IFkQV~agi~hlh~~~---ivhrdikdenvivd~~g~~klid 713 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIE----FKPRMDEPEAKLIFKQVVAGIKHLHDQG---IVHRDIKDENVIVDSNGFVKLID 713 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhh----ccCccchHHHHHHHHHHHhccccccccC---ceecccccccEEEecCCeEEEee
Confidence 999999999764 447888884 4557999999999999999999999999 99999999999999999999999
Q ss_pred cccccccccccccccccccccccccccchhhhcCCCc-cccceeeHHHHHHHHHhCCCCCC
Q 003605 556 FGLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLL-VKSDVYSYGVVILELLSGRKPVD 615 (808)
Q Consensus 556 FGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s-~kSDVwSfGvvLlELlTG~~P~~ 615 (808)
||.|....... ....+||.+|.|||++.+..|- ..-|||++|++||-++....||.
T Consensus 714 fgsaa~~ksgp----fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 714 FGSAAYTKSGP----FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred ccchhhhcCCC----cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 99987543322 2346799999999999988874 55799999999999998888873
No 401
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.92 E-value=1.3e-25 Score=236.33 Aligned_cols=256 Identities=22% Similarity=0.322 Sum_probs=192.7
Q ss_pred CCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeec--ccchhhHHHHHHHHHHhhcccccceeEEeeeeec------cc
Q 003605 409 GNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKR--VDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEE------QA 479 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~--~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~------~~ 479 (808)
.+|...+.+|.|.- .|..+... .++.||+|++.. .+....++..+|..++..++|+||++++.++.-. .+
T Consensus 17 ~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~e 95 (369)
T KOG0665|consen 17 KRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQE 95 (369)
T ss_pred eeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHHh
Confidence 45666778888887 55555433 578999998753 3345567788999999999999999999998643 35
Q ss_pred eEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccc
Q 003605 480 RCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLA 559 (808)
Q Consensus 480 ~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa 559 (808)
.|+||||| ..+|...++ ..++-.+...|..|++.|+.|||+.+ |+||||||+||++..+..+||.|||+|
T Consensus 96 ~y~v~e~m-~~nl~~vi~------~elDH~tis~i~yq~~~~ik~lhs~~---IihRdLkPsnivv~~~~~lKi~dfg~a 165 (369)
T KOG0665|consen 96 VYLVMELM-DANLCQVIL------MELDHETISYILYQMLCGIKHLHSAG---IIHRDLKPSNIVVNSDCTLKILDFGLA 165 (369)
T ss_pred HHHHHHhh-hhHHHHHHH------HhcchHHHHHHHHHHHHHHHHHHhcc---eeecccCcccceecchhheeeccchhh
Confidence 69999999 569998886 24677888999999999999999998 999999999999999999999999999
Q ss_pred cccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhh---------
Q 003605 560 RSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWAR--------- 630 (808)
Q Consensus 560 ~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~--------- 630 (808)
+.... ....+..+.|..|.|||++.+..+.+..||||.||++.||++|+.-|...+ .+-+|.+
T Consensus 166 r~e~~---~~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~g~d-----~idQ~~ki~~~lgtpd 237 (369)
T KOG0665|consen 166 RTEDT---DFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFPGKD-----HIDQWNKIIEQLGTPD 237 (369)
T ss_pred cccCc---ccccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEecCch-----HHHHHHHHHHHhcCCC
Confidence 86432 234466778999999999998889999999999999999999998876322 2222221
Q ss_pred ------------hhccccc-----cccccc-CCCCCCC--CChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 631 ------------PLLTSRE-----GLERII-DPSLGND--VPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 631 ------------~~~~~~~-----~l~~iv-D~~l~~~--~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
......+ ...+++ |..+... .+.-......+++.+||..+|++|-++.++++.
T Consensus 238 ~~F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~H 310 (369)
T KOG0665|consen 238 PSFMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALRH 310 (369)
T ss_pred HHHHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhcC
Confidence 0000000 011111 1111111 111234567889999999999999999999875
No 402
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.92 E-value=1.7e-25 Score=225.74 Aligned_cols=259 Identities=20% Similarity=0.324 Sum_probs=192.9
Q ss_pred hCCcceeeeeeecCcEEEEEEE-eeCCCEEEEEEeecccchhhHHHHHHHHHHhhcc-cccceeEEeeeeec--cceEEE
Q 003605 408 TGNFDASRILGEGGFGLVYSGV-LDDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLH-HRNLVKLIGICIEE--QARCLV 483 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~-l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~-HpNIV~L~g~~~~~--~~~~LV 483 (808)
.++|++.+.+|+|.++.||.|. ..+.+.++||+|+.. ..+.+.+|++||..|. |+||+.|++...+. ....||
T Consensus 37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPV---kkkKIkREikIL~nL~gg~NIi~L~DiV~Dp~SktpaLi 113 (338)
T KOG0668|consen 37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPV---KKKKIKREIKILQNLRGGPNIIKLLDIVKDPESKTPSLI 113 (338)
T ss_pred cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechH---HHHHHHHHHHHHHhccCCCCeeehhhhhcCccccCchhH
Confidence 4678888999999999999998 457889999999853 4568899999999997 99999999998765 455899
Q ss_pred EeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCC-Ccceeccccccccc
Q 003605 484 YELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHD-FTPKVSDFGLARSA 562 (808)
Q Consensus 484 ~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~-~~vKL~DFGLa~~~ 562 (808)
+||++|-+..... ..|+..++...+.++++||.|+|+.| |+|||+||.|++||.. ...+|+|+|||...
T Consensus 114 FE~v~n~Dfk~ly-------~tl~d~dIryY~~elLkALdyCHS~G---ImHRDVKPhNvmIdh~~rkLrlIDWGLAEFY 183 (338)
T KOG0668|consen 114 FEYVNNTDFKQLY-------PTLTDYDIRYYIYELLKALDYCHSMG---IMHRDVKPHNVMIDHELRKLRLIDWGLAEFY 183 (338)
T ss_pred hhhhccccHHHHh-------hhhchhhHHHHHHHHHHHHhHHHhcC---cccccCCcceeeechhhceeeeeecchHhhc
Confidence 9999887765544 24677788889999999999999998 9999999999999865 57999999999866
Q ss_pred ccccccccccccccccccccchhhhcC-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccc------
Q 003605 563 MDEESRHISTRVMGTFGYVAPEYAMTG-HLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTS------ 635 (808)
Q Consensus 563 ~~~~~~~~~~~~~Gt~~Y~APE~l~~~-~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~------ 635 (808)
.......+ .+.+..|.-||.+..- .|+..-|+|||||+|.+|+..+.||-....+ ..+++.-+.-+-++
T Consensus 184 Hp~~eYnV---RVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN-~DQLVkIakVLGt~el~~Yl 259 (338)
T KOG0668|consen 184 HPGKEYNV---RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDN-YDQLVKIAKVLGTDELYAYL 259 (338)
T ss_pred CCCceeee---eeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCC-HHHHHHHHHHhChHHHHHHH
Confidence 44332221 2356678899988764 5677889999999999999999998654332 23344333221111
Q ss_pred -------ccccccccCCCCCCC----C---C-hhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 636 -------REGLERIIDPSLGND----V---P-FDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 636 -------~~~l~~ivD~~l~~~----~---~-~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
......++....+.. . + .-...+.++++...|..|-.+|+|++|....
T Consensus 260 ~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~H 322 (338)
T KOG0668|consen 260 NKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMAH 322 (338)
T ss_pred HHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhcC
Confidence 011111111111110 0 0 1123678899999999999999999998654
No 403
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.92 E-value=1.2e-25 Score=274.23 Aligned_cols=196 Identities=19% Similarity=0.258 Sum_probs=141.0
Q ss_pred hccc-ccceeEEeee-------eeccceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCc
Q 003605 461 RLHH-RNLVKLIGIC-------IEEQARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPR 532 (808)
Q Consensus 461 ~L~H-pNIV~L~g~~-------~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~ 532 (808)
.++| .||++++++| .+.+..++++||+ +++|.++|+. ....+++.+++.|+.||++||+|||+++
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~---~~~~~~~~~~~~i~~qi~~al~~lH~~g--- 100 (793)
T PLN00181 28 SLSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDN---PDRSVDAFECFHVFRQIVEIVNAAHSQG--- 100 (793)
T ss_pred hhhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhc---ccccccHHHHHHHHHHHHHHHHHHHhCC---
Confidence 4555 6888888887 3334567888988 6699999963 2345999999999999999999999988
Q ss_pred EEeeeecccCeeecC-------------------CCcceecccccccccccccc--------------cccccccccccc
Q 003605 533 VIHRDFKSSNILLEH-------------------DFTPKVSDFGLARSAMDEES--------------RHISTRVMGTFG 579 (808)
Q Consensus 533 IiHrDIKpsNILLd~-------------------~~~vKL~DFGLa~~~~~~~~--------------~~~~~~~~Gt~~ 579 (808)
|+||||||+||||+. ++.+||+|||+++....... ........||+.
T Consensus 101 IvHrDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~ 180 (793)
T PLN00181 101 IVVHNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSW 180 (793)
T ss_pred eeeccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcc
Confidence 999999999999954 45677777777764211000 000112457889
Q ss_pred cccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCCCCChhhHHHH
Q 003605 580 YVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGNDVPFDSVAKV 659 (808)
Q Consensus 580 Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l 659 (808)
|||||++.+..++.++|||||||+||||++|..|+.... .....+.. ....+.. .......
T Consensus 181 Y~APE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~----~~~~~~~~----------~~~~~~~-----~~~~~~~ 241 (793)
T PLN00181 181 YTSPEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKS----RTMSSLRH----------RVLPPQI-----LLNWPKE 241 (793)
T ss_pred eEChhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHH----HHHHHHHH----------hhcChhh-----hhcCHHH
Confidence 999999999999999999999999999999988764211 00101100 0111111 1122345
Q ss_pred HHHHHHccccCCCCCCCHHHHHH
Q 003605 660 AAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 660 ~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
..++.+||+.+|.+||+|.||++
T Consensus 242 ~~~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 242 ASFCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred HHHHHHhCCCChhhCcChHHHhh
Confidence 68889999999999999999975
No 404
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.91 E-value=1.6e-24 Score=214.72 Aligned_cols=170 Identities=23% Similarity=0.216 Sum_probs=127.1
Q ss_pred CCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccccc
Q 003605 490 GSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRH 569 (808)
Q Consensus 490 GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~ 569 (808)
|+|.++++. .+..++|.+++.|+.|+++||+|||+++ ||+|||++.++.+|+ ||+++.....
T Consensus 1 GsL~~~l~~---~~~~l~~~~~~~i~~qi~~~L~~lH~~~---------kp~Nil~~~~~~~~~--fG~~~~~~~~---- 62 (176)
T smart00750 1 VSLADILEV---RGRPLNEEEIWAVCLQCLRALRELHRQA---------KSGNILLTWDGLLKL--DGSVAFKTPE---- 62 (176)
T ss_pred CcHHHHHHH---hCCCCCHHHHHHHHHHHHHHHHHHHhcC---------CcccEeEcCccceee--ccceEeeccc----
Confidence 688999863 2346999999999999999999999875 999999999999999 9998764321
Q ss_pred cccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCC
Q 003605 570 ISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGN 649 (808)
Q Consensus 570 ~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~ 649 (808)
...||..|||||++.+..++.++|||||||++|||+||+.||...... ...+..+...... . ++. ..
T Consensus 63 ---~~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~-~~~~~~~~~~~~~-------~-~~~-~~ 129 (176)
T smart00750 63 ---QSRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEEREL-SAILEILLNGMPA-------D-DPR-DR 129 (176)
T ss_pred ---cCCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchh-cHHHHHHHHHhcc-------C-Ccc-cc
Confidence 125789999999999999999999999999999999999998643211 1111111111000 0 000 00
Q ss_pred CCChhhH--HHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHh
Q 003605 650 DVPFDSV--AKVAAIASMCVQPEVQHRPFMGEVVQALKLVCNE 690 (808)
Q Consensus 650 ~~~~~~~--~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~~~ 690 (808)
....... ..+.+++.+||+.+|++||++.|+++.+..+..+
T Consensus 130 ~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~ 172 (176)
T smart00750 130 SNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFAE 172 (176)
T ss_pred ccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHHH
Confidence 0111222 2699999999999999999999999998876543
No 405
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.90 E-value=2.5e-24 Score=233.78 Aligned_cols=267 Identities=24% Similarity=0.304 Sum_probs=196.7
Q ss_pred HHHhCCcceeeeeeecCcEEEEEEEee----CCCEEEEEEeecccchhhHHHHHHHHHHhhcc-cccceeEEeeeeeccc
Q 003605 405 EKATGNFDASRILGEGGFGLVYSGVLD----DGTKVAVKVLKRVDQQGGREFLAEVEMLSRLH-HRNLVKLIGICIEEQA 479 (808)
Q Consensus 405 ~~at~~f~~~~~LG~G~fG~VYkg~l~----dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~-HpNIV~L~g~~~~~~~ 479 (808)
....+.|...++||+|.|++||++++. ..+.||+|.+..... -.++.+|+++|..+. +.||+.+.+++...+.
T Consensus 32 p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~--p~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~ 109 (418)
T KOG1167|consen 32 PFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS--PSRILNELEMLYRLGGSDNIIKLNGCFRNNDQ 109 (418)
T ss_pred hhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC--chHHHHHHHHHHHhccchhhhcchhhhccCCe
Confidence 345577889999999999999999854 357899999975433 357899999999995 9999999999999999
Q ss_pred eEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCC-Ccceeccccc
Q 003605 480 RCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHD-FTPKVSDFGL 558 (808)
Q Consensus 480 ~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~-~~vKL~DFGL 558 (808)
.++|+||++.....+++. .++..++...++.+..||+++|.++ ||||||||+|+|.+.. +.-.|.||||
T Consensus 110 v~ivlp~~~H~~f~~l~~-------~l~~~~i~~Yl~~ll~Al~~~h~~G---IvHRDiKpsNFL~n~~t~rg~LvDFgL 179 (418)
T KOG1167|consen 110 VAIVLPYFEHDRFRDLYR-------SLSLAEIRWYLRNLLKALAHLHKNG---IVHRDIKPSNFLYNRRTQRGVLVDFGL 179 (418)
T ss_pred eEEEecccCccCHHHHHh-------cCCHHHHHHHHHHHHHHhhhhhccC---ccccCCCccccccccccCCceEEechh
Confidence 999999999988888874 3677889999999999999999999 9999999999999754 7789999999
Q ss_pred cccccc-------cc--------------------------c---------cccccccccccccccchhhhc-CCCcccc
Q 003605 559 ARSAMD-------EE--------------------------S---------RHISTRVMGTFGYVAPEYAMT-GHLLVKS 595 (808)
Q Consensus 559 a~~~~~-------~~--------------------------~---------~~~~~~~~Gt~~Y~APE~l~~-~~~s~kS 595 (808)
|..... .. . ........||+||.|||++.. ..-+.+.
T Consensus 180 A~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~Qttai 259 (418)
T KOG1167|consen 180 AQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAI 259 (418)
T ss_pred HHHHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCcc
Confidence 851100 00 0 000012569999999999875 4568899
Q ss_pred ceeeHHHHHHHHHhCCCCCCCCCCCCc--chhH---Hhh--------hhh--cccccc----------cccc-cCCCC--
Q 003605 596 DVYSYGVVILELLSGRKPVDMTQPPGQ--ENLV---AWA--------RPL--LTSREG----------LERI-IDPSL-- 647 (808)
Q Consensus 596 DVwSfGvvLlELlTG~~P~~~~~~~~~--~~lv---~w~--------~~~--~~~~~~----------l~~i-vD~~l-- 647 (808)
||||-|||++-+++++.||-....... ..++ .|. ... +.++.. .+.+ +....
T Consensus 260 Diws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~ 339 (418)
T KOG1167|consen 260 DIWSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKS 339 (418)
T ss_pred ceeeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccc
Confidence 999999999999999999865443211 1111 110 000 000000 1111 00000
Q ss_pred ------CCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 648 ------GNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 648 ------~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
.....+.....+++++.+|+..||.+|.+++|.++.
T Consensus 340 ~q~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALkH 381 (418)
T KOG1167|consen 340 RQPNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALKH 381 (418)
T ss_pred cccceeeccccccccHHHHHHHHHHccCChhhcccHHHHhcC
Confidence 011122334578999999999999999999999865
No 406
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.89 E-value=4.8e-22 Score=218.06 Aligned_cols=263 Identities=22% Similarity=0.261 Sum_probs=198.1
Q ss_pred CcceeeeeeecCcEEEEEEEeeCC--CEEEEEEeecccchhhHHHHHHHHHHhhccc----ccceeEEeee-eeccceEE
Q 003605 410 NFDASRILGEGGFGLVYSGVLDDG--TKVAVKVLKRVDQQGGREFLAEVEMLSRLHH----RNLVKLIGIC-IEEQARCL 482 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~dg--~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~H----pNIV~L~g~~-~~~~~~~L 482 (808)
+|.+.+.||+|+||.||++...+. ..+|+|............+..|+.++..+.. .++..+++.. ..+...++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 799999999999999999997643 4788888775433333378889999998873 6889999888 46778899
Q ss_pred EEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCC-----Ccceecccc
Q 003605 483 VYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHD-----FTPKVSDFG 557 (808)
Q Consensus 483 V~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~-----~~vKL~DFG 557 (808)
||+.+ +-+|.++..... ...++..+.++|+.|++.+|++||+.+ ++||||||.|+++... ..+.|.|||
T Consensus 99 VM~l~-G~sL~dl~~~~~--~~~fs~~T~l~ia~q~l~~l~~lH~~G---~iHRDiKp~N~~~g~~~~~~~~~~~llDfG 172 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNP--PGRFSRKTVLRIAIQNLNALEDLHSKG---FIHRDIKPENFVVGQSSRSEVRTLYLLDFG 172 (322)
T ss_pred EEecc-CccHHHHHHhCC--CCCcCHhHHHHHHHHHHHHHHHHHhcC---cccCCcCHHHeeecCCCCcccceEEEEecC
Confidence 99988 789999775433 356899999999999999999999999 9999999999999754 469999999
Q ss_pred ccc--cccccccc---cc---ccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhh
Q 003605 558 LAR--SAMDEESR---HI---STRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWA 629 (808)
Q Consensus 558 La~--~~~~~~~~---~~---~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~ 629 (808)
+++ ........ .. .....||..|.++..+.+...+.+.|+||++.++.||+.|..||...........+.-
T Consensus 173 lar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~~~~~~~- 251 (322)
T KOG1164|consen 173 LARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDLKSKFEK- 251 (322)
T ss_pred CCccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccchHHHHHH-
Confidence 998 43322211 11 1234599999999999999999999999999999999999999965433211110000
Q ss_pred hhhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHhh
Q 003605 630 RPLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLVCNEC 691 (808)
Q Consensus 630 ~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~~~~ 691 (808)
......... ........+.++...+-..+...+|....+...|+....+.
T Consensus 252 -------~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~~ 301 (322)
T KOG1164|consen 252 -------DPRKLLTDR-----FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDSE 301 (322)
T ss_pred -------Hhhhhcccc-----ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHhc
Confidence 000001110 11122345666666666689999999999999998877664
No 407
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.88 E-value=1.5e-22 Score=224.79 Aligned_cols=166 Identities=20% Similarity=0.171 Sum_probs=130.0
Q ss_pred HHhCCcceeeeeeecCcEEEEEEEee--CCCEEEEEEeecc-----cchhhHHHHHHHHHHhhccccccee-EEeeeeec
Q 003605 406 KATGNFDASRILGEGGFGLVYSGVLD--DGTKVAVKVLKRV-----DQQGGREFLAEVEMLSRLHHRNLVK-LIGICIEE 477 (808)
Q Consensus 406 ~at~~f~~~~~LG~G~fG~VYkg~l~--dg~~VAVK~lk~~-----~~~~~~~f~~Ei~iL~~L~HpNIV~-L~g~~~~~ 477 (808)
...++|.+.+.||+|+||+||+|.+. +++.||||++... .....+.|.+|+++|.+++|+|++. ++++
T Consensus 15 ~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~---- 90 (365)
T PRK09188 15 ALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT---- 90 (365)
T ss_pred cccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc----
Confidence 45678999999999999999999865 5778899987532 1223567999999999999999985 4432
Q ss_pred cceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeee-cccCeeecCCCcceeccc
Q 003605 478 QARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDF-KSSNILLEHDFTPKVSDF 556 (808)
Q Consensus 478 ~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDI-KpsNILLd~~~~vKL~DF 556 (808)
+..+|||||+++++|... . ... ...++.++++||+|||+.+ |+|||| ||+|||++.++++||+||
T Consensus 91 ~~~~LVmE~~~G~~L~~~-~---~~~-------~~~~~~~i~~aL~~lH~~g---IiHrDL~KP~NILv~~~~~ikLiDF 156 (365)
T PRK09188 91 GKDGLVRGWTEGVPLHLA-R---PHG-------DPAWFRSAHRALRDLHRAG---ITHNDLAKPQNWLMGPDGEAAVIDF 156 (365)
T ss_pred CCcEEEEEccCCCCHHHh-C---ccc-------hHHHHHHHHHHHHHHHHCC---CeeCCCCCcceEEEcCCCCEEEEEC
Confidence 467999999999999632 1 110 1467889999999999988 999999 999999999999999999
Q ss_pred cccccccccccccc------ccccccccccccchhhhcC
Q 003605 557 GLARSAMDEESRHI------STRVMGTFGYVAPEYAMTG 589 (808)
Q Consensus 557 GLa~~~~~~~~~~~------~~~~~Gt~~Y~APE~l~~~ 589 (808)
|+|+.......... .+...+++.|+|||++...
T Consensus 157 GlA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 157 QLASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred ccceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 99986644321111 1356788999999988643
No 408
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.88 E-value=1.5e-21 Score=203.26 Aligned_cols=261 Identities=31% Similarity=0.433 Sum_probs=197.2
Q ss_pred cceeeeeeecCcEEEEEEEeeCCCEEEEEEeecccch---hhHHHHHHHHHHhhcccc-cceeEEeeeeeccceEEEEee
Q 003605 411 FDASRILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQ---GGREFLAEVEMLSRLHHR-NLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 411 f~~~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~---~~~~f~~Ei~iL~~L~Hp-NIV~L~g~~~~~~~~~LV~Ey 486 (808)
|...+.||.|+||.||++... ..+++|.+...... ..+.|.+|+.+++.+.|+ |++++.+++......+++++|
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 667889999999999999876 78999998753322 467899999999999988 799999999777778999999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCC-cceecccccccccccc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDF-TPKVSDFGLARSAMDE 565 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~-~vKL~DFGLa~~~~~~ 565 (808)
+.+++|.+++...... ..+.......++.+++.++.|+|+.+ ++||||||+||+++... .++++|||+++.....
T Consensus 80 ~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~H~~~---~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~ 155 (384)
T COG0515 80 VDGGSLEDLLKKIGRK-GPLSESEALFILAQILSALEYLHSKG---IIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDP 155 (384)
T ss_pred CCCCcHHHHHHhcccc-cCCCHHHHHHHHHHHHHHHHHHHhCC---eeccCCCHHHeeecCCCCeEEEeccCcceecCCC
Confidence 9999999766422111 26888999999999999999999998 99999999999999988 7999999999855433
Q ss_pred cccc----cccccccccccccchhhhc---CCCccccceeeHHHHHHHHHhCCCCCCCCCCC-CcchhHHhhhhhccccc
Q 003605 566 ESRH----ISTRVMGTFGYVAPEYAMT---GHLLVKSDVYSYGVVILELLSGRKPVDMTQPP-GQENLVAWARPLLTSRE 637 (808)
Q Consensus 566 ~~~~----~~~~~~Gt~~Y~APE~l~~---~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~-~~~~lv~w~~~~~~~~~ 637 (808)
.... ......|+..|++||.+.. ..+....|+|++|++++++++|..|+...... ...............
T Consensus 156 ~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~-- 233 (384)
T COG0515 156 GSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTP-- 233 (384)
T ss_pred CccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCc--
Confidence 2221 2355679999999999987 57889999999999999999999996543321 011111111111100
Q ss_pred ccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 638 GLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 638 ~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
.................+.+++..|+..+|..|.++.+....
T Consensus 234 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 234 ----SLASPLSPSNPELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred ----ccccccCccccchhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 000000000002223578899999999999999999987765
No 409
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.87 E-value=2.1e-23 Score=214.77 Aligned_cols=244 Identities=21% Similarity=0.370 Sum_probs=193.3
Q ss_pred eeeeecCcEEEEEEEeeCCCEEEEEEee--cccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecCCCCc
Q 003605 415 RILGEGGFGLVYSGVLDDGTKVAVKVLK--RVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIPNGSV 492 (808)
Q Consensus 415 ~~LG~G~fG~VYkg~l~dg~~VAVK~lk--~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~~GsL 492 (808)
.+|.+...|..|+|+++ |..+++|+++ .......++|..|.-.|+.+.||||+.++|.|....++.++..||+.|+|
T Consensus 196 tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp~gsl 274 (448)
T KOG0195|consen 196 TKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMPFGSL 274 (448)
T ss_pred hhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeeccchHH
Confidence 46888999999999997 6677778875 33455567899999999999999999999999999999999999999999
Q ss_pred cccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceec--cccccccccccccccc
Q 003605 493 ESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVS--DFGLARSAMDEESRHI 570 (808)
Q Consensus 493 ~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~--DFGLa~~~~~~~~~~~ 570 (808)
...||+ .....++-.+..++|.++|+|++|||+.. |-|.---|.+..++||++.+++|+ |--++. ..
T Consensus 275 ynvlhe--~t~vvvd~sqav~faldiargmaflhsle-p~ipr~~lns~hvmidedltarismad~kfsf--qe------ 343 (448)
T KOG0195|consen 275 YNVLHE--QTSVVVDHSQAVRFALDIARGMAFLHSLE-PMIPRFYLNSKHVMIDEDLTARISMADTKFSF--QE------ 343 (448)
T ss_pred HHHHhc--CccEEEecchHHHHHHHHHhhHHHHhhcc-hhhhhhhcccceEEecchhhhheecccceeee--ec------
Confidence 999995 34456788899999999999999999985 435555799999999999998884 221111 10
Q ss_pred ccccccccccccchhhhcCCC---ccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCC
Q 003605 571 STRVMGTFGYVAPEYAMTGHL---LVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSL 647 (808)
Q Consensus 571 ~~~~~Gt~~Y~APE~l~~~~~---s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l 647 (808)
....-.+.||+||.++...- -+++|+|||.++||||.|...||....+-+.. -++.-+.+
T Consensus 344 -~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecg----------------mkialegl 406 (448)
T KOG0195|consen 344 -VGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECG----------------MKIALEGL 406 (448)
T ss_pred -cccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhh----------------hhhhhccc
Confidence 11234678999999987643 35789999999999999999999754432111 11222334
Q ss_pred CCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHH
Q 003605 648 GNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLV 687 (808)
Q Consensus 648 ~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i 687 (808)
+-.++......+.+++.-|...||.+||.+..|+-.||+.
T Consensus 407 rv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm 446 (448)
T KOG0195|consen 407 RVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKM 446 (448)
T ss_pred cccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHh
Confidence 4556667778899999999999999999999999999865
No 410
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.83 E-value=9.1e-21 Score=193.04 Aligned_cols=272 Identities=22% Similarity=0.304 Sum_probs=210.3
Q ss_pred CHHHHHHHhCCcceeeeeeecCcEEEEEEE-eeCCCEEEEEEeecccchhhHHHHHHHHHHhhccc-ccceeEEeeeeec
Q 003605 400 SASEIEKATGNFDASRILGEGGFGLVYSGV-LDDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHH-RNLVKLIGICIEE 477 (808)
Q Consensus 400 s~~el~~at~~f~~~~~LG~G~fG~VYkg~-l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~H-pNIV~L~g~~~~~ 477 (808)
+.+++. ..++|.+.+.||.|+||.+|.|. ..+|+.||||.-+... ..-++..|.++++.|+| ..|..+..|..++
T Consensus 7 s~~~~i-v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a--~hpqL~yEskvY~iL~~g~GiP~i~~y~~e~ 83 (341)
T KOG1163|consen 7 SLEELI-VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKA--KHPQLLYESKVYRILQGGVGIPHIRHYGTEK 83 (341)
T ss_pred chhhhe-eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccC--CCcchhHHHHHHHHhccCCCCchhhhhcccc
Confidence 344444 34689999999999999999998 5689999999876432 23467789999999975 6777788888888
Q ss_pred cceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCC---Ccceec
Q 003605 478 QARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHD---FTPKVS 554 (808)
Q Consensus 478 ~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~---~~vKL~ 554 (808)
+...||||.+ +-+|+++..-+. ..++..+.+.+|-|++.-++|+|.++ +|||||||+|+|..-+ ..+.++
T Consensus 84 ~ynvlVMdLL-GPsLEdLfnfC~---R~ftmkTvLMLaDQml~RiEyvH~r~---fiHRDIKPdNFLMGlgrh~~kl~LI 156 (341)
T KOG1163|consen 84 DYNVLVMDLL-GPSLEDLFNFCS---RRFTMKTVLMLADQMLSRIEYVHLRN---FIHRDIKPDNFLMGLGRHCNKLYLI 156 (341)
T ss_pred ccceeeeecc-CccHHHHHHHHh---hhhhHHhHHHHHHHHHHHHHHHHhhc---cccccCCccceeeccccccceEEEE
Confidence 8889999999 779999886433 35788899999999999999999999 9999999999999643 578999
Q ss_pred cccccccccccccc-cc----ccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhh
Q 003605 555 DFGLARSAMDEESR-HI----STRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWA 629 (808)
Q Consensus 555 DFGLa~~~~~~~~~-~~----~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~ 629 (808)
|||||+.+.+.... ++ .....||..|.+-..+.+..-+.+.|+-|+|.+|..+.-|..||+........+-
T Consensus 157 DFGLaKky~d~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QK---- 232 (341)
T KOG1163|consen 157 DFGLAKKYRDIRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQK---- 232 (341)
T ss_pred eccchhhhccccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhHHHH----
Confidence 99999877654332 22 2357799999998888888889999999999999999999999986554332211
Q ss_pred hhhcccccccccccCCCCCC---CCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHhhhhh
Q 003605 630 RPLLTSREGLERIIDPSLGN---DVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLVCNECDEA 694 (808)
Q Consensus 630 ~~~~~~~~~l~~ivD~~l~~---~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~~~~~~~ 694 (808)
.+.|....+.. ..-.....++.-.+.-|-..--++-|...-+.+.+..+...++..
T Consensus 233 ---------yEkI~EkK~s~~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr~ln~~ 291 (341)
T KOG1163|consen 233 ---------YEKISEKKMSTPIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFRTLNHQ 291 (341)
T ss_pred ---------HHHHHHhhcCCCHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHhhcccc
Confidence 11222211111 111234567888889999999999999999988888887776654
No 411
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.82 E-value=8.4e-20 Score=193.13 Aligned_cols=272 Identities=19% Similarity=0.259 Sum_probs=205.2
Q ss_pred hCCcceeeeeeecCcEEEEEEE-eeCCCEEEEEEeecccchhhHHHHHHHHHHhhcc-cccceeEEeeeeeccceEEEEe
Q 003605 408 TGNFDASRILGEGGFGLVYSGV-LDDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLH-HRNLVKLIGICIEEQARCLVYE 485 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~-l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~-HpNIV~L~g~~~~~~~~~LV~E 485 (808)
.-.|.+.++||+|.||.++.|+ +-+++.||||.-... ...-++..|.+.++.|. .++|...+.|-.++..-.||+|
T Consensus 27 G~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrk--S~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVid 104 (449)
T KOG1165|consen 27 GPHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRK--SEAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVID 104 (449)
T ss_pred cccceeccccccCcceeeecccccccCceEEEEecccc--CCcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhh
Confidence 3468899999999999999998 447999999976432 22346778888888884 7899988888777778899999
Q ss_pred ecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecC-----CCcceeccccccc
Q 003605 486 LIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEH-----DFTPKVSDFGLAR 560 (808)
Q Consensus 486 y~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~-----~~~vKL~DFGLa~ 560 (808)
++ +-||+|+..-+. ..++..+.+.||.|++.-++|+|++. +|.|||||+|+||.. ...+.|+|||+|+
T Consensus 105 LL-GPSLEDLFD~Cg---R~FSvKTV~miA~Qmi~rie~vH~k~---LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK 177 (449)
T KOG1165|consen 105 LL-GPSLEDLFDLCG---RRFSVKTVAMIAKQMITRIEYVHEKD---LIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAK 177 (449)
T ss_pred hh-CcCHHHHHHHhc---CcccHHhHHHHHHHHHHHHHHHHhcc---eeecccCccceeecCCCCCCCceEEEEeccchh
Confidence 99 779999875433 45888999999999999999999998 999999999999954 3468999999999
Q ss_pred cccccccc-ccc----cccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccc
Q 003605 561 SAMDEESR-HIS----TRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTS 635 (808)
Q Consensus 561 ~~~~~~~~-~~~----~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~ 635 (808)
...+.... ++. ...-||.+||+-..+.+++-+.+.|.-|+|-|++..|-|..||........
T Consensus 178 ~YrDp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tn------------- 244 (449)
T KOG1165|consen 178 EYRDPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKADTN------------- 244 (449)
T ss_pred hhcCccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCcch-------------
Confidence 87765432 222 346799999999999999999999999999999999999999986543321
Q ss_pred ccccccccCCCCCCC---CChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHHhhhhhhhcCCCC
Q 003605 636 REGLERIIDPSLGND---VPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLVCNECDEAKEVGSAS 701 (808)
Q Consensus 636 ~~~l~~ivD~~l~~~---~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~~~~~~~~~~~~~~ 701 (808)
++..++|-|..-... .-.....++..-+.-.-..+-++-|...-+...+..++.......+-..+|
T Consensus 245 K~kYeKIGe~Kr~T~i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr~g~t~Dg~yDW 313 (449)
T KOG1165|consen 245 KEKYEKIGETKRSTPIEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDRLGETDDGEYDW 313 (449)
T ss_pred HHHHHHhccccccCCHHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHhcCCcccccccc
Confidence 122222222211111 011123344444444445678888999999988888888877665544444
No 412
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.81 E-value=5.9e-21 Score=224.61 Aligned_cols=254 Identities=20% Similarity=0.201 Sum_probs=186.9
Q ss_pred eeeeeeecCcEEEEEEEee-CCCEEEEEEee----c-ccch-hhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEe
Q 003605 413 ASRILGEGGFGLVYSGVLD-DGTKVAVKVLK----R-VDQQ-GGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYE 485 (808)
Q Consensus 413 ~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk----~-~~~~-~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~E 485 (808)
..+++|.|++|.|+..... ..+..+.|..+ . .... ....+..|+.+-..++|+|++..+..+.+.....-.||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 4578999999977776633 33434444332 1 1111 11225667778888999999998888887777666699
Q ss_pred ecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccc
Q 003605 486 LIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDE 565 (808)
Q Consensus 486 y~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~ 565 (808)
||+. +|..++.. ...+...++..++.|+.+|++|||..+ |.|||||++|+++..++.+||+|||.+..+...
T Consensus 402 ~~~~-Dlf~~~~~----~~~~~~~e~~c~fKqL~~Gv~y~h~~G---iahrdlK~enll~~~~g~lki~Dfg~~~vf~~~ 473 (601)
T KOG0590|consen 402 YCPY-DLFSLVMS----NGKLTPLEADCFFKQLLRGVKYLHSMG---LAHRDLKLENLLVTENGILKIIDFGAASVFRYP 473 (601)
T ss_pred cccH-HHHHHHhc----ccccchhhhhHHHHHHHHHHHHHHhcC---ceeccCccccEEEecCCceEEeecCcceeeccC
Confidence 9999 99998842 235778889999999999999999999 999999999999999999999999999766544
Q ss_pred ccc--ccccccccccccccchhhhcCCCcc-ccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccc
Q 003605 566 ESR--HISTRVMGTFGYVAPEYAMTGHLLV-KSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERI 642 (808)
Q Consensus 566 ~~~--~~~~~~~Gt~~Y~APE~l~~~~~s~-kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~i 642 (808)
... .......|.-.|+|||.+....|.. ..||||.|+++..|++|+.||......+.... . .......
T Consensus 474 ~e~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~~--~-------~~~~~~~ 544 (601)
T KOG0590|consen 474 WEKNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSFK--T-------NNYSDQR 544 (601)
T ss_pred cchhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccchh--h-------hcccccc
Confidence 443 5556778999999999999988865 57999999999999999999987655433210 0 0000000
Q ss_pred cCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 643 IDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 643 vD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
-+..-..........+...++.++|+.+|.+|-|+++|++.
T Consensus 545 ~~~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~d 585 (601)
T KOG0590|consen 545 NIFEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILND 585 (601)
T ss_pred ccccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhhC
Confidence 00000011112345677889999999999999999999763
No 413
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.81 E-value=6.8e-20 Score=191.06 Aligned_cols=172 Identities=13% Similarity=0.146 Sum_probs=134.0
Q ss_pred HHhCCcceeeeeeecCcEEEEEEEeeCCCEEEEEEeecccchhhH---H------HHHHHHHHhhcccccceeEEeeeee
Q 003605 406 KATGNFDASRILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQGGR---E------FLAEVEMLSRLHHRNLVKLIGICIE 476 (808)
Q Consensus 406 ~at~~f~~~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~~~~---~------f~~Ei~iL~~L~HpNIV~L~g~~~~ 476 (808)
-..++|+..++||+|+||.||.... ++..+|||.++.......+ . |.+|+..+.+++|++|..+.+++..
T Consensus 28 ~l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~ 106 (232)
T PRK10359 28 FLSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLL 106 (232)
T ss_pred HhhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeee
Confidence 3578999999999999999999655 5778999999743222222 2 6899999999999999999988654
Q ss_pred c--------cceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCC
Q 003605 477 E--------QARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHD 548 (808)
Q Consensus 477 ~--------~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~ 548 (808)
. +..+|||||++|.+|.++.. ++. ....+++.+|..||+.+ ++||||||+||+++.+
T Consensus 107 ~~~~~~~~~~~~~lvmEyi~G~tL~~~~~--------~~~----~~~~~i~~~l~~lH~~g---i~H~Dikp~Nili~~~ 171 (232)
T PRK10359 107 AERKTLRYAHTYIMLIEYIEGVELNDMPE--------ISE----DVKAKIKASIESLHQHG---MVSGDPHKGNFIVSKN 171 (232)
T ss_pred cccccccccCCeEEEEEEECCccHHHhhh--------ccH----HHHHHHHHHHHHHHHcC---CccCCCChHHEEEeCC
Confidence 3 35789999999999987741 222 24558999999999998 9999999999999988
Q ss_pred CcceecccccccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHH
Q 003605 549 FTPKVSDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELL 608 (808)
Q Consensus 549 ~~vKL~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELl 608 (808)
+ ++|+|||........... -.++....+..++|+|+||+.+.-+.
T Consensus 172 g-i~liDfg~~~~~~e~~a~--------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 172 G-LRIIDLSGKRCTAQRKAK--------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred C-EEEEECCCcccccchhhH--------------HHHHHHhHhcccccccceeEeehHHH
Confidence 8 999999988654211110 01455556778999999999987654
No 414
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.81 E-value=8.9e-20 Score=185.72 Aligned_cols=139 Identities=20% Similarity=0.232 Sum_probs=107.9
Q ss_pred eeeeeecCcEEEEEEEeeCCCEEEEEEeecccch--h-------hHHH-----------------HHHHHHHhhcccccc
Q 003605 414 SRILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQ--G-------GREF-----------------LAEVEMLSRLHHRNL 467 (808)
Q Consensus 414 ~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~--~-------~~~f-----------------~~Ei~iL~~L~HpNI 467 (808)
...||+|+||.||+|...+|+.||||+++..... . ..+| ..|++++.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 3679999999999999888999999999753211 1 1122 349999999988876
Q ss_pred eeEEeeeeeccceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHH-HhcCCCcEEeeeecccCeeec
Q 003605 468 VKLIGICIEEQARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYL-HEDSSPRVIHRDFKSSNILLE 546 (808)
Q Consensus 468 V~L~g~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yL-H~~~~p~IiHrDIKpsNILLd 546 (808)
.....+.. ...+|||||+++++|...+. ....+++.+..+++.|++.+|.|| |+.+ |+||||||+|||++
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~----~~~~~~~~~~~~i~~qi~~~L~~l~H~~g---iiHrDlkP~NIli~ 152 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRL----KDAPLSESKARELYLQVIQIMRILYQDCR---LVHADLSEYNLLYH 152 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhh----hcCCCCHHHHHHHHHHHHHHHHHHHHhCC---cccCCCCHHHEEEE
Confidence 44333222 23489999998877665432 123688999999999999999999 6877 99999999999998
Q ss_pred CCCcceeccccccccc
Q 003605 547 HDFTPKVSDFGLARSA 562 (808)
Q Consensus 547 ~~~~vKL~DFGLa~~~ 562 (808)
++.++|+|||+|...
T Consensus 153 -~~~v~LiDFG~a~~~ 167 (190)
T cd05147 153 -DGKLYIIDVSQSVEH 167 (190)
T ss_pred -CCcEEEEEccccccC
Confidence 478999999998743
No 415
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.80 E-value=1.3e-20 Score=222.25 Aligned_cols=247 Identities=23% Similarity=0.251 Sum_probs=184.1
Q ss_pred CcceeeeeeecCcEEEEEEEeeCCCEEEEEEeecc-cchhhHHHHHHHHHHh--hcccccceeEEeeeeeccceEEEEee
Q 003605 410 NFDASRILGEGGFGLVYSGVLDDGTKVAVKVLKRV-DQQGGREFLAEVEMLS--RLHHRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~-~~~~~~~f~~Ei~iL~--~L~HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
+|...+.||.+.|=+|.+|+.++|. |+||++-+. .....+.|.++++-++ .++|||.+.+.-+-......|||-+|
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik~~l~~~pn~lPfqk~~~t~kAAylvRqy 102 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIKFALMKAPNCLPFQKVLVTDKAAYLVRQY 102 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHHHHhhcCCcccchHHHHHhhHHHHHHHHH
Confidence 6777889999999999999998887 889987543 3444555655554444 45899999999887777777999999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccc-cc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAM-DE 565 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~-~~ 565 (808)
+.+ +|.|.|. .+.-|..-+...|+.|++.||..+|+.+ |+|||||.+||||+.-+-+.|+||..-+... .+
T Consensus 103 vkh-nLyDRlS----TRPFL~~iEKkWiaFQLL~al~qcH~~g---VcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPe 174 (1431)
T KOG1240|consen 103 VKH-NLYDRLS----TRPFLVLIEKKWIAFQLLKALSQCHKLG---VCHGDIKSENILITSWNWLYLTDFASFKPTYLPE 174 (1431)
T ss_pred Hhh-hhhhhhc----cchHHHHHHHHHHHHHHHHHHHHHHHcC---ccccccccceEEEeeechhhhhcccccCCccCCC
Confidence 955 8999883 5556778889999999999999999998 9999999999999999999999997654221 11
Q ss_pred cc----cccccccccccccccchhhhcC-----------CCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhh
Q 003605 566 ES----RHISTRVMGTFGYVAPEYAMTG-----------HLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWA 629 (808)
Q Consensus 566 ~~----~~~~~~~~Gt~~Y~APE~l~~~-----------~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~ 629 (808)
+. ......-..-.+|+|||.+... .++.+-||||+||++.||++ |+.+|+. .+|..|-
T Consensus 175 DNPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L------SQL~aYr 248 (1431)
T KOG1240|consen 175 DNPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL------SQLLAYR 248 (1431)
T ss_pred CCcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH------HHHHhHh
Confidence 11 1111112233589999987542 26788999999999999999 7888864 2333332
Q ss_pred hhh-cccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 630 RPL-LTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 630 ~~~-~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
+.- ...+..++++-| ..+.+++..|++.||++|-++++.++.
T Consensus 249 ~~~~~~~e~~Le~Ied------------~~~Rnlil~Mi~rdPs~RlSAedyL~~ 291 (1431)
T KOG1240|consen 249 SGNADDPEQLLEKIED------------VSLRNLILSMIQRDPSKRLSAEDYLQK 291 (1431)
T ss_pred ccCccCHHHHHHhCcC------------ccHHHHHHHHHccCchhccCHHHHHHh
Confidence 221 111122333322 246789999999999999999999886
No 416
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.79 E-value=2.9e-19 Score=202.62 Aligned_cols=218 Identities=23% Similarity=0.378 Sum_probs=162.9
Q ss_pred HhhcccccceeEEeeeeeccceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeee
Q 003605 459 LSRLHHRNLVKLIGICIEEQARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDF 538 (808)
Q Consensus 459 L~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDI 538 (808)
|+.+.|.|+.+++|.+.++...+.|.+||..|+|.|.+.. ....++|.....+..++++||+|||.-. -..|+.+
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~---~~~~~d~~F~~s~~rdi~~Gl~ylh~s~--i~~hg~l 75 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSN---EDIKLDYFFILSFIRDISKGLAYLHNSP--IGYHGAL 75 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhc---cccCccHHHHHHHHHHHHHHHHHHhcCc--ceeeeee
Confidence 4578899999999999999999999999999999999963 4567999999999999999999999653 3499999
Q ss_pred cccCeeecCCCcceecccccccccccccccccccccccccccccchhhhcC-------CCccccceeeHHHHHHHHHhCC
Q 003605 539 KSSNILLEHDFTPKVSDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMTG-------HLLVKSDVYSYGVVILELLSGR 611 (808)
Q Consensus 539 KpsNILLd~~~~vKL~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~-------~~s~kSDVwSfGvvLlELlTG~ 611 (808)
+.+|+++|..+.+||+|||+.................-..-|.|||.+... ..+.+.||||||++++|+++.+
T Consensus 76 ~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~ 155 (484)
T KOG1023|consen 76 KSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRS 155 (484)
T ss_pred ccccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhcc
Confidence 999999999999999999998655321111111112234579999988753 2477899999999999999999
Q ss_pred CCCCCCCCCCc-chhHHhhhhhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHHHHH
Q 003605 612 KPVDMTQPPGQ-ENLVAWARPLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKLVCN 689 (808)
Q Consensus 612 ~P~~~~~~~~~-~~lv~w~~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~i~~ 689 (808)
.||+....... ..++.++.. .....+-|.+... .+....+..++.+||..+|++||++++|-..++.+..
T Consensus 156 ~~~~~~~~~~~~~eii~~~~~------~~~~~~rP~i~~~--~e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 156 GPFDLRNLVEDPDEIILRVKK------GGSNPFRPSIELL--NELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred CccccccccCChHHHHHHHHh------cCCCCcCcchhhh--hhcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence 99986443222 233343322 0111112222111 1333479999999999999999999999877765443
No 417
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.79 E-value=7.7e-19 Score=178.35 Aligned_cols=139 Identities=22% Similarity=0.221 Sum_probs=110.1
Q ss_pred eeeeeecCcEEEEEEEeeCCCEEEEEEeecccch--------------------------hhHHHHHHHHHHhhcccccc
Q 003605 414 SRILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQ--------------------------GGREFLAEVEMLSRLHHRNL 467 (808)
Q Consensus 414 ~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~--------------------------~~~~f~~Ei~iL~~L~HpNI 467 (808)
...||+|+||.||+|...+|+.||||+++..... ....+..|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4689999999999999878999999998753210 01224578999999999987
Q ss_pred eeEEeeeeeccceEEEEeecCCCCcccc-ccccccCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCcEEeeeecccCeee
Q 003605 468 VKLIGICIEEQARCLVYELIPNGSVESH-LHGVDKESAPLGWDARLKIALGAARALAYLHE-DSSPRVIHRDFKSSNILL 545 (808)
Q Consensus 468 V~L~g~~~~~~~~~LV~Ey~~~GsL~~~-L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~-~~~p~IiHrDIKpsNILL 545 (808)
.....+... ..+|||||++++++... +. ...++..+..+++.+++.+|.+||. .+ |+||||||+|||+
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~-----~~~~~~~~~~~i~~~l~~~l~~lH~~~g---ivHrDlkP~NIll 151 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLK-----DVPLEEEEAEELYEQVVEQMRRLYQEAG---LVHGDLSEYNILY 151 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhh-----hccCCHHHHHHHHHHHHHHHHHHHHhCC---EecCCCChhhEEE
Confidence 544444332 34899999988755433 32 2347788899999999999999999 87 9999999999999
Q ss_pred cCCCcceecccccccccc
Q 003605 546 EHDFTPKVSDFGLARSAM 563 (808)
Q Consensus 546 d~~~~vKL~DFGLa~~~~ 563 (808)
+ +++++|+|||++....
T Consensus 152 ~-~~~~~liDFG~a~~~~ 168 (190)
T cd05145 152 H-DGKPYIIDVSQAVELD 168 (190)
T ss_pred E-CCCEEEEEcccceecC
Confidence 9 7899999999997653
No 418
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.74 E-value=7.5e-18 Score=180.75 Aligned_cols=234 Identities=21% Similarity=0.338 Sum_probs=150.7
Q ss_pred CcceeeeeeecCcEEEEEEEee-CCCEEEEEEeec---ccchhhHHHHHHHHHHhhcc----------cccceeEEeeee
Q 003605 410 NFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKR---VDQQGGREFLAEVEMLSRLH----------HRNLVKLIGICI 475 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~---~~~~~~~~f~~Ei~iL~~L~----------HpNIV~L~g~~~ 475 (808)
.+...+.||.|+++.||.+++. +++.+|||.... ......+++.+|.-.+..+. |-.++--++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 3456789999999999999976 689999999853 23344567777766555532 212221111111
Q ss_pred ---------ec---c-----ceEEEEeecCCCCccccccccc---cCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEe
Q 003605 476 ---------EE---Q-----ARCLVYELIPNGSVESHLHGVD---KESAPLGWDARLKIALGAARALAYLHEDSSPRVIH 535 (808)
Q Consensus 476 ---------~~---~-----~~~LV~Ey~~~GsL~~~L~~~~---~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiH 535 (808)
.. . +.+++|+-+ .++|.+++.... .....+....++.+..|+++.+++||..+ ++|
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~G---lVH 168 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYG---LVH 168 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTT---EEE
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcc---eEe
Confidence 11 1 346788877 578888764321 11223555677888899999999999999 999
Q ss_pred eeecccCeeecCCCcceecccccccccccccccccccccccccccccchhhhcC--------CCccccceeeHHHHHHHH
Q 003605 536 RDFKSSNILLEHDFTPKVSDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMTG--------HLLVKSDVYSYGVVILEL 607 (808)
Q Consensus 536 rDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~--------~~s~kSDVwSfGvvLlEL 607 (808)
+|||++|+|++.+|.++|+||+......... . . ...+..|.+||..... .++.+.|.|++|++||.|
T Consensus 169 gdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~---~-~-~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~l 243 (288)
T PF14531_consen 169 GDIKPENFLLDQDGGVFLGDFSSLVRAGTRY---R-C-SEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYSL 243 (288)
T ss_dssp ST-SGGGEEE-TTS-EEE--GGGEEETTEEE---E-G-GGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHHH
T ss_pred cccceeeEEEcCCCCEEEcChHHHeecCcee---e-c-cCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHHH
Confidence 9999999999999999999998876543211 1 1 2345789999976442 468899999999999999
Q ss_pred HhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCC
Q 003605 608 LSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHR 674 (808)
Q Consensus 608 lTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~R 674 (808)
++|+.||+......... | . ...+. +..+.+..|+..+|+.+|++|
T Consensus 244 WC~~lPf~~~~~~~~~~---~-----------------~-f~~C~-~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 244 WCGRLPFGLSSPEADPE---W-----------------D-FSRCR-DMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHSS-STCCCGGGSTSG---G-----------------G-GTTSS----HHHHHHHHHHT-SSGGGS
T ss_pred HHccCCCCCCCcccccc---c-----------------c-chhcC-CcCHHHHHHHHHHccCCcccC
Confidence 99999997543221111 0 1 12233 556789999999999999988
No 419
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.74 E-value=6.4e-18 Score=173.46 Aligned_cols=185 Identities=19% Similarity=0.155 Sum_probs=137.6
Q ss_pred ceeeeeeecCcEEEEEEEeeCCCEEEEEEeecccc----hhhHHHHHHHHHHhhcc-cccceeEEeeeeeccceEEEEee
Q 003605 412 DASRILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQ----QGGREFLAEVEMLSRLH-HRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 412 ~~~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~----~~~~~f~~Ei~iL~~L~-HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
.+...|++|+||+||.+.- ++.+++.+.+..... .....|.+|+++|++|+ |+++.+++++ +..+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 4567899999999997655 678888888765322 11235889999999995 5889999886 456999999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeee-cccCeeecCCCcceecccccccccccc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDF-KSSNILLEHDFTPKVSDFGLARSAMDE 565 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDI-KpsNILLd~~~~vKL~DFGLa~~~~~~ 565 (808)
+.+.+|.+.+. . ....++.+++++|+++|+++ |+|||| ||+|||++.++.++|+|||+|......
T Consensus 80 I~G~~L~~~~~----~-------~~~~~~~qi~~~L~~lH~~G---IvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~ 145 (218)
T PRK12274 80 LAGAAMYQRPP----R-------GDLAYFRAARRLLQQLHRCG---VAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPR 145 (218)
T ss_pred ecCccHHhhhh----h-------hhHHHHHHHHHHHHHHHHCc---CccCCCCCcceEEEcCCCCEEEEECCCceecCCc
Confidence 99988865431 0 11356789999999999998 999999 799999999999999999999754322
Q ss_pred cc----------ccc-ccccccccccccchhhhcC-CCc-cccceeeHHHHHHHHHhCCCCCC
Q 003605 566 ES----------RHI-STRVMGTFGYVAPEYAMTG-HLL-VKSDVYSYGVVILELLSGRKPVD 615 (808)
Q Consensus 566 ~~----------~~~-~~~~~Gt~~Y~APE~l~~~-~~s-~kSDVwSfGvvLlELlTG~~P~~ 615 (808)
.. .++ ......++.|++|+-..-- ..+ .+.+.++-|+.+|.++|++.+.-
T Consensus 146 ~~~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~ 208 (218)
T PRK12274 146 ARWMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHW 208 (218)
T ss_pred chHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCcc
Confidence 11 000 1123367788888744321 222 45688999999999999988753
No 420
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.72 E-value=7.9e-19 Score=199.47 Aligned_cols=225 Identities=27% Similarity=0.358 Sum_probs=175.7
Q ss_pred eeeecCcEEEEEEE----eeCCCEEEEEEeecccch--hhHHHHHHHHHHhhcc-cccceeEEeeeeeccceEEEEeecC
Q 003605 416 ILGEGGFGLVYSGV----LDDGTKVAVKVLKRVDQQ--GGREFLAEVEMLSRLH-HRNLVKLIGICIEEQARCLVYELIP 488 (808)
Q Consensus 416 ~LG~G~fG~VYkg~----l~dg~~VAVK~lk~~~~~--~~~~f~~Ei~iL~~L~-HpNIV~L~g~~~~~~~~~LV~Ey~~ 488 (808)
++|+|.||.|+... .+.|..+|+|.+++.... .......|..++..++ |+.+|++...+..+...+++.+|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 37999999998665 335778899988753211 1125566888899887 9999999999999999999999999
Q ss_pred CCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccccccc
Q 003605 489 NGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESR 568 (808)
Q Consensus 489 ~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~ 568 (808)
+|.|..++.. ....++.........++-++++||+.+ |+|||+|++||+++.+|.+++.|||+++...+....
T Consensus 81 gg~lft~l~~----~~~f~~~~~~~~~aelaLald~lh~l~---iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~ 153 (612)
T KOG0603|consen 81 GGDLFTRLSK----EVMFDELDVAFYLAELALALDHLHKLG---IAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA 153 (612)
T ss_pred cchhhhcccc----CCchHHHHHHHHHHHHHHHHhhcchhH---HHHhcccccceeecccCccccCCchhhhHhHhhhhc
Confidence 9999988853 233555555666678899999999998 999999999999999999999999999876543322
Q ss_pred ccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCC
Q 003605 569 HISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLG 648 (808)
Q Consensus 569 ~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~ 648 (808)
+||..|||||++. ......|.||||++++||+||..||.. +.+..|... .
T Consensus 154 ------cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~--------------------~~~~~Il~~--~ 203 (612)
T KOG0603|consen 154 ------CGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG--------------------DTMKRILKA--E 203 (612)
T ss_pred ------ccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch--------------------HHHHHHhhh--c
Confidence 7899999999987 456789999999999999999999953 111111111 1
Q ss_pred CCCChhhHHHHHHHHHHccccCCCCCCCH
Q 003605 649 NDVPFDSVAKVAAIASMCVQPEVQHRPFM 677 (808)
Q Consensus 649 ~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm 677 (808)
-..+.+.......++.+++..+|..|--.
T Consensus 204 ~~~p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 204 LEMPRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred cCCchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 12455566677888889999999999755
No 421
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.72 E-value=1.2e-17 Score=201.28 Aligned_cols=199 Identities=22% Similarity=0.259 Sum_probs=155.9
Q ss_pred HHHHhCCcceeeeeeecCcEEEEEEEeeCCCEEEEEEeecccchhhHHHHHHHHHHhhcc---cccceeEEeeeeeccce
Q 003605 404 IEKATGNFDASRILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLH---HRNLVKLIGICIEEQAR 480 (808)
Q Consensus 404 l~~at~~f~~~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~---HpNIV~L~g~~~~~~~~ 480 (808)
.+.-.+.|.+.+.||+|+||+||+|...+|+.||+|+-+.... -+|.-=.+++.||+ -+-|..+..++.-.+.-
T Consensus 693 ~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~---WEfYI~~q~~~RLk~~~~~~~~~~~~a~~~~~~S 769 (974)
T KOG1166|consen 693 FEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNP---WEFYICLQVMERLKPQMLPSIMHISSAHVFQNAS 769 (974)
T ss_pred eeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCc---eeeeehHHHHHhhchhhhcchHHHHHHHccCCcc
Confidence 3444567889999999999999999988899999999764221 12222233444444 23344455555556777
Q ss_pred EEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecC-------CCccee
Q 003605 481 CLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEH-------DFTPKV 553 (808)
Q Consensus 481 ~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~-------~~~vKL 553 (808)
+||+||.+.|+|.+++. ....++|.-.+.++.|+++.++.||..+ |||+||||+|.||.. +.-++|
T Consensus 770 ~lv~ey~~~Gtlld~~N----~~~~m~e~lv~~~~~qml~ive~lH~~~---IIHgDiKPDNfll~~~~~~~~~~~~l~l 842 (974)
T KOG1166|consen 770 VLVSEYSPYGTLLDLIN----TNKVMDEYLVMFFSCQMLRIVEHLHAMG---IIHGDIKPDNFLLRREICADSDSKGLYL 842 (974)
T ss_pred eeeeeccccccHHHhhc----cCCCCCchhhhHHHHHHHHHHHHHHhcc---eecccCCcceeEeecccCCCCcccceEE
Confidence 99999999999999995 4567999999999999999999999998 999999999999932 346899
Q ss_pred cccccccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCC
Q 003605 554 SDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRK 612 (808)
Q Consensus 554 ~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~ 612 (808)
+|||.+-.+.--..........+|-.+-.+|+..++.++...|-|.|..+++-||.|+.
T Consensus 843 IDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 843 IDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred EecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 99999865432222223345668889999999999999999999999999999999975
No 422
>PRK10345 hypothetical protein; Provisional
Probab=99.72 E-value=3e-17 Score=169.73 Aligned_cols=136 Identities=17% Similarity=0.267 Sum_probs=105.5
Q ss_pred eeeeeeecCcEEEEEEEeeCCCEEEEEEeecccchhhHHHHHHHHHHhhc-----ccccceeEEeeeeecc---c-eEEE
Q 003605 413 ASRILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQGGREFLAEVEMLSRL-----HHRNLVKLIGICIEEQ---A-RCLV 483 (808)
Q Consensus 413 ~~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L-----~HpNIV~L~g~~~~~~---~-~~LV 483 (808)
..++||+|+||.||. ...++.. +||++........+++.+|+++++.+ .|+||++++|++.++. . ..+|
T Consensus 6 ~~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~I 83 (210)
T PRK10345 6 EQSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDVI 83 (210)
T ss_pred CcceecCCCceEEEE-CCCCcCe-EEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEEE
Confidence 457899999999996 3234444 69988754444567899999999999 5799999999998763 3 2378
Q ss_pred Eee--cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHH-HHHHhcCCCcEEeeeecccCeeecC----CCcceeccc
Q 003605 484 YEL--IPNGSVESHLHGVDKESAPLGWDARLKIALGAARAL-AYLHEDSSPRVIHRDFKSSNILLEH----DFTPKVSDF 556 (808)
Q Consensus 484 ~Ey--~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL-~yLH~~~~p~IiHrDIKpsNILLd~----~~~vKL~DF 556 (808)
+|| +.+|+|.+++.. . .+++. ..++.+++.++ +|||+++ |+||||||+|||++. +.+++|+||
T Consensus 84 ~e~~G~~~~tL~~~l~~----~-~~~e~--~~~~~~~L~~l~~yLh~~~---IvhrDlKp~NILl~~~~~~~~~~~LiDg 153 (210)
T PRK10345 84 ADFDGKPSITLTEFAEQ----C-RYEED--VAQLRQLLKKLKRYLLDNR---IVTMELKPQNILCQRISESEVIPVVCDN 153 (210)
T ss_pred ecCCCCcchhHHHHHHc----c-cccHh--HHHHHHHHHHHHHHHHHCC---EeecCCCHHHEEEeccCCCCCcEEEEEC
Confidence 999 557999999953 1 25444 35577788777 9999998 999999999999974 348999995
Q ss_pred cccc
Q 003605 557 GLAR 560 (808)
Q Consensus 557 GLa~ 560 (808)
+.++
T Consensus 154 ~G~~ 157 (210)
T PRK10345 154 IGES 157 (210)
T ss_pred CCCc
Confidence 5443
No 423
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.70 E-value=7e-17 Score=165.23 Aligned_cols=134 Identities=21% Similarity=0.285 Sum_probs=113.4
Q ss_pred eeeeecCcEEEEEEEeeCCCEEEEEEeecccc--------hhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEee
Q 003605 415 RILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQ--------QGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 415 ~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~--------~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
+.||+|++|.||+|.. +|..|+||+...... ....++.+|++++..++|+|+.....++...+..++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5799999999999987 578899998653211 1234688899999999999998888787777888999999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARS 561 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~ 561 (808)
+++++|.+++.. ..+ ++..++.+++.+|++||+.+ ++|||++|.|||++ ++.++|+|||+++.
T Consensus 81 ~~G~~L~~~~~~-------~~~-~~~~i~~~i~~~l~~lH~~~---i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINS-------NGM-EELELSREIGRLVGKLHSAG---IIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHh-------ccH-HHHHHHHHHHHHHHHHHhCC---cccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 999999998852 122 88899999999999999998 99999999999999 78999999999864
No 424
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.69 E-value=1.3e-16 Score=162.78 Aligned_cols=145 Identities=19% Similarity=0.118 Sum_probs=113.5
Q ss_pred HHHHHHhCCcceeeeeeecCcEEEEEEEeeCCCEEEEEEeecccc----------------------hhhHHHHHHHHHH
Q 003605 402 SEIEKATGNFDASRILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQ----------------------QGGREFLAEVEML 459 (808)
Q Consensus 402 ~el~~at~~f~~~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~----------------------~~~~~f~~Ei~iL 459 (808)
.++......|.+.+.||+|+||.||++...+|+.||||+++.... .....+..|+.++
T Consensus 8 ~~~~~~~~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l 87 (198)
T cd05144 8 HTLVKRGVVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAAL 87 (198)
T ss_pred HHHHHcCchhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHH
Confidence 344444445788899999999999999988899999998753210 0112367789999
Q ss_pred hhccccc--ceeEEeeeeeccceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeee
Q 003605 460 SRLHHRN--LVKLIGICIEEQARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRD 537 (808)
Q Consensus 460 ~~L~HpN--IV~L~g~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrD 537 (808)
..+.|.+ +...++. ...++||||+++++|.+.... .....++.+++.++.++|+.+ |+|||
T Consensus 88 ~~l~~~~i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~----------~~~~~~~~~i~~~l~~lh~~g---i~H~D 150 (198)
T cd05144 88 KALYEEGFPVPKPIDW----NRHAVVMEYIDGVELYRVRVL----------EDPEEVLDEILEEIVKAYKHG---IIHGD 150 (198)
T ss_pred HHHHHcCCCCCceeec----CCceEEEEEeCCcchhhcccc----------ccHHHHHHHHHHHHHHHHHCC---CCcCC
Confidence 9998874 4445442 455899999999998775420 234678899999999999987 99999
Q ss_pred ecccCeeecCCCcceecccccccccc
Q 003605 538 FKSSNILLEHDFTPKVSDFGLARSAM 563 (808)
Q Consensus 538 IKpsNILLd~~~~vKL~DFGLa~~~~ 563 (808)
|||+||+++++++++|+|||++....
T Consensus 151 l~p~Nill~~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 151 LSEFNILVDDDEKIYIIDWPQMVSTD 176 (198)
T ss_pred CCcccEEEcCCCcEEEEECCccccCC
Confidence 99999999999999999999996543
No 425
>smart00090 RIO RIO-like kinase.
Probab=99.69 E-value=1.7e-16 Score=167.16 Aligned_cols=143 Identities=17% Similarity=0.139 Sum_probs=111.2
Q ss_pred CCcceeeeeeecCcEEEEEEE--eeCCCEEEEEEeecccch------------------------hhHHHHHHHHHHhhc
Q 003605 409 GNFDASRILGEGGFGLVYSGV--LDDGTKVAVKVLKRVDQQ------------------------GGREFLAEVEMLSRL 462 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~--l~dg~~VAVK~lk~~~~~------------------------~~~~f~~Ei~iL~~L 462 (808)
..|.+.+.||+|+||.||+|+ ..+|+.||||+++..... ....+..|++++.++
T Consensus 28 ~~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L 107 (237)
T smart00090 28 ILSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRL 107 (237)
T ss_pred chHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 357888999999999999998 568999999998743210 112356899999999
Q ss_pred cccc--ceeEEeeeeeccceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecc
Q 003605 463 HHRN--LVKLIGICIEEQARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKS 540 (808)
Q Consensus 463 ~HpN--IV~L~g~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKp 540 (808)
.+.+ +.+++++ ...++||||+++++|..++.. ...+...+...++.|++.+|++||..+ .|+||||||
T Consensus 108 ~~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~----~~~~~~~~~~~i~~qi~~~l~~LH~~g--~iiH~Dikp 177 (237)
T smart00090 108 YEAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLK----DVEPEEEEEFELYDDILEEMRKLYKEG--ELVHGDLSE 177 (237)
T ss_pred HhcCCCCCeeeEe----cCceEEEEEecCCcccccccc----cCCcchHHHHHHHHHHHHHHHHHHhcC--CEEeCCCCh
Confidence 7633 3444443 235899999999888776521 223555667899999999999999875 499999999
Q ss_pred cCeeecCCCcceeccccccccc
Q 003605 541 SNILLEHDFTPKVSDFGLARSA 562 (808)
Q Consensus 541 sNILLd~~~~vKL~DFGLa~~~ 562 (808)
+||+++ +++++|+|||++...
T Consensus 178 ~NIli~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 178 YNILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred hhEEEE-CCCEEEEEChhhhcc
Confidence 999999 889999999998743
No 426
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.67 E-value=1.1e-16 Score=187.40 Aligned_cols=137 Identities=18% Similarity=0.267 Sum_probs=112.5
Q ss_pred hCCcceeeeeeecCcEEEEEEEeeCCCEEEEEE-eecc-------cchhhHHHHHHHHHHhhcccccceeEEeeeeeccc
Q 003605 408 TGNFDASRILGEGGFGLVYSGVLDDGTKVAVKV-LKRV-------DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQA 479 (808)
Q Consensus 408 t~~f~~~~~LG~G~fG~VYkg~l~dg~~VAVK~-lk~~-------~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~ 479 (808)
...|...++||+|+||+||+|.+.+. .+++|+ +.+. .....+++.+|++++.+++|+|++....++.+...
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~-~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~ 410 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLGR-DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE 410 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecCc-cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC
Confidence 34456678999999999999987644 344443 2211 11223578899999999999999998888887778
Q ss_pred eEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccc
Q 003605 480 RCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLA 559 (808)
Q Consensus 480 ~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa 559 (808)
.++||||+++++|.+++. ....++.+++++|+|||+.+ ++||||||+|||+ +++.++|+|||++
T Consensus 411 ~~lv~E~~~g~~L~~~l~------------~~~~~~~~i~~~L~~lH~~g---iiHrDlkp~NILl-~~~~~~liDFGla 474 (535)
T PRK09605 411 KTIVMEYIGGKDLKDVLE------------GNPELVRKVGEIVAKLHKAG---IVHGDLTTSNFIV-RDDRLYLIDFGLG 474 (535)
T ss_pred CEEEEEecCCCcHHHHHH------------HHHHHHHHHHHHHHHHHhCC---CccCCCChHHEEE-ECCcEEEEeCccc
Confidence 899999999999998874 45778999999999999998 9999999999999 5779999999998
Q ss_pred cc
Q 003605 560 RS 561 (808)
Q Consensus 560 ~~ 561 (808)
+.
T Consensus 475 ~~ 476 (535)
T PRK09605 475 KY 476 (535)
T ss_pred cc
Confidence 75
No 427
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.67 E-value=1.9e-16 Score=160.69 Aligned_cols=130 Identities=20% Similarity=0.314 Sum_probs=106.7
Q ss_pred eeeecCcEEEEEEEeeCCCEEEEEEeeccc--------chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeec
Q 003605 416 ILGEGGFGLVYSGVLDDGTKVAVKVLKRVD--------QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELI 487 (808)
Q Consensus 416 ~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~--------~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~ 487 (808)
+||+|+||.||+|.+ +|..|++|+..... ....+++.+|++++..++|.++.....++...+..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 489999999999985 57889999865321 112356788999999999887666555666667779999999
Q ss_pred CCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccc
Q 003605 488 PNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARS 561 (808)
Q Consensus 488 ~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~ 561 (808)
++++|.+++... . ..++.+++.+|++||+.+ ++|||++|+||+++ ++++++.|||+++.
T Consensus 80 ~g~~l~~~~~~~----~-------~~~~~~i~~~l~~lH~~g---i~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 80 EGKPLKDVIEEG----N-------DELLREIGRLVGKLHKAG---IVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CCccHHHHHhhc----H-------HHHHHHHHHHHHHHHHCC---eecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 999999887421 1 078999999999999998 99999999999999 88999999999864
No 428
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.66 E-value=6.7e-17 Score=174.36 Aligned_cols=198 Identities=20% Similarity=0.210 Sum_probs=135.8
Q ss_pred ccccceeEEeeeee---------------------------ccceEEEEeecCCCCccccccccccCCCCCCHHHHHHHH
Q 003605 463 HHRNLVKLIGICIE---------------------------EQARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIA 515 (808)
Q Consensus 463 ~HpNIV~L~g~~~~---------------------------~~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia 515 (808)
+|||||++.++|.+ ...+|+||.-++ .+|.++|-. ...+...+.-|+
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~-~tLr~yl~~-----~~~s~r~~~~~l 347 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYR-QTLREYLWT-----RHRSYRTGRVIL 347 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcch-hhHHHHHhc-----CCCchHHHHHHH
Confidence 59999999988764 224578887774 488888742 235566777788
Q ss_pred HHHHHHHHHHHhcCCCcEEeeeecccCeeec--CC--Ccceeccccccccccccc----ccccccccccccccccchhhh
Q 003605 516 LGAARALAYLHEDSSPRVIHRDFKSSNILLE--HD--FTPKVSDFGLARSAMDEE----SRHISTRVMGTFGYVAPEYAM 587 (808)
Q Consensus 516 ~qia~gL~yLH~~~~p~IiHrDIKpsNILLd--~~--~~vKL~DFGLa~~~~~~~----~~~~~~~~~Gt~~Y~APE~l~ 587 (808)
.|+++|+.|||.++ |.|||+|++||||. +| -...|+|||++-.-.... ...-.-...|.-.-||||+..
T Consensus 348 aQlLEav~hL~~hg---vAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~t 424 (598)
T KOG4158|consen 348 AQLLEAVTHLHKHG---VAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIAT 424 (598)
T ss_pred HHHHHHHHHHHHcc---chhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhh
Confidence 89999999999999 99999999999993 33 346889999974221100 000011234677899999875
Q ss_pred cC--C----CccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCCCCChhhHHHHHH
Q 003605 588 TG--H----LLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGNDVPFDSVAKVAA 661 (808)
Q Consensus 588 ~~--~----~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~ 661 (808)
.. . -..|+|.|+.|.+.||+++...||..... ..-+...|. +--- ...+......+.+
T Consensus 425 a~PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~rGe-m~L~~r~Yq-----------e~qL----Palp~~vpp~~rq 488 (598)
T KOG4158|consen 425 AVPGPNAVVNYEKADTWAAGALAYEIFGRSNPFYKRGE-MLLDTRTYQ-----------ESQL----PALPSRVPPVARQ 488 (598)
T ss_pred cCCCCceeeccchhhhhhhhhhHHHHhccCCcccccch-heechhhhh-----------hhhC----CCCcccCChHHHH
Confidence 42 1 13689999999999999999999965221 111111111 1001 1233344567888
Q ss_pred HHHHccccCCCCCCCHHHHHHHHH
Q 003605 662 IASMCVQPEVQHRPFMGEVVQALK 685 (808)
Q Consensus 662 Li~~Cl~~dP~~RPsm~eVl~~Le 685 (808)
++...|+.||.+|++..-....|+
T Consensus 489 lV~~lL~r~pskRvsp~iAANvl~ 512 (598)
T KOG4158|consen 489 LVFDLLKRDPSKRVSPNIAANVLN 512 (598)
T ss_pred HHHHHhcCCccccCCccHHHhHHH
Confidence 999999999999998876666654
No 429
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.64 E-value=4.6e-17 Score=182.15 Aligned_cols=174 Identities=27% Similarity=0.366 Sum_probs=130.5
Q ss_pred ceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccc
Q 003605 479 ARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGL 558 (808)
Q Consensus 479 ~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGL 558 (808)
..++.|++|...+|.+||.+.+ .....+|...+.++.|++.|+.| ++ .+|||+||.||+...+..+||.|||+
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~-~~e~~s~s~~~~~~~q~~~~~~y---k~---~ihrdlkp~nif~~~d~q~kIgDFgl 402 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRR-TGEERSLSLMLDIFKQIAPAVEY---KG---LIHRDLKPSNIFFSDDDQLKIGDFGL 402 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCC-cccccchhHHHHHHHhhccchhh---cc---chhhhccccccccccchhhhhhhhhh
Confidence 4689999999999999997543 33467889999999999999999 55 89999999999999999999999999
Q ss_pred cccccccc----ccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh-CCCCCCCCCCCCcchhHHhhhhhc
Q 003605 559 ARSAMDEE----SRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS-GRKPVDMTQPPGQENLVAWARPLL 633 (808)
Q Consensus 559 a~~~~~~~----~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT-G~~P~~~~~~~~~~~lv~w~~~~~ 633 (808)
........ .....+...||..||+||.+.+..|+.|+||||||+||+||++ =...++- .-
T Consensus 403 ~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er---------------~~ 467 (516)
T KOG1033|consen 403 VTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFER---------------IA 467 (516)
T ss_pred eeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHH---------------HH
Confidence 86544322 1223356789999999999999999999999999999999997 1111110 00
Q ss_pred ccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHH
Q 003605 634 TSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGE 679 (808)
Q Consensus 634 ~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~e 679 (808)
...+..+.++++....+++ .=..++.+++...|.+||++.+
T Consensus 468 t~~d~r~g~ip~~~~~d~p-----~e~~ll~~lls~~p~~RP~~~~ 508 (516)
T KOG1033|consen 468 TLTDIRDGIIPPEFLQDYP-----EEYTLLQQLLSPSPEERPSAIE 508 (516)
T ss_pred hhhhhhcCCCChHHhhcCc-----HHHHHHHHhcCCCcccCchHHH
Confidence 1111222233333333343 2346889999999999994433
No 430
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.62 E-value=3.5e-15 Score=141.37 Aligned_cols=135 Identities=21% Similarity=0.213 Sum_probs=115.4
Q ss_pred eeeeeeecCcEEEEEEEeeCCCEEEEEEeecccchhhHHHHHHHHHHhhccc--ccceeEEeeeeeccceEEEEeecCCC
Q 003605 413 ASRILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHH--RNLVKLIGICIEEQARCLVYELIPNG 490 (808)
Q Consensus 413 ~~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~H--pNIV~L~g~~~~~~~~~LV~Ey~~~G 490 (808)
+.+.||+|.++.||++...+ ..++||..+.... ..++.+|+.++..++| .++.+++++....+..++++||+.++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~ 78 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE 78 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence 35789999999999999864 7899999865433 5679999999999986 58999999988888899999999887
Q ss_pred CccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccc
Q 003605 491 SVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARS 561 (808)
Q Consensus 491 sL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~ 561 (808)
.+..+ ++.....++.+++++|++||......++|+||+++||+++.++.+++.|||+++.
T Consensus 79 ~~~~~-----------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 79 TLDEV-----------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred ecccC-----------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 76543 5567788899999999999987555699999999999999989999999999864
No 431
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.58 E-value=7.1e-15 Score=147.54 Aligned_cols=135 Identities=24% Similarity=0.276 Sum_probs=98.5
Q ss_pred eeeeeecCcEEEEEEEeeCCCEEEEEEeecccch--hhHHH----------------------HHHHHHHhhccccc--c
Q 003605 414 SRILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQ--GGREF----------------------LAEVEMLSRLHHRN--L 467 (808)
Q Consensus 414 ~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~--~~~~f----------------------~~Ei~iL~~L~HpN--I 467 (808)
.+.||+|+||+||+|...+++.||||+++..... ....+ ..|.+.+.++.+.+ +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 4679999999999999888999999998742211 11111 35666666665443 4
Q ss_pred eeEEeeeeeccceEEEEeecCCCCcccc-ccccccCCCCCCHHHHHHHHHHHHHHHHHHHh-cCCCcEEeeeecccCeee
Q 003605 468 VKLIGICIEEQARCLVYELIPNGSVESH-LHGVDKESAPLGWDARLKIALGAARALAYLHE-DSSPRVIHRDFKSSNILL 545 (808)
Q Consensus 468 V~L~g~~~~~~~~~LV~Ey~~~GsL~~~-L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~-~~~p~IiHrDIKpsNILL 545 (808)
.+.+++ ...++||||++++.+... +... ... .+..+++.+++.++.++|. .+ |+||||||+||++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~-----~~~-~~~~~~~~~~~~~l~~lh~~~~---ivH~Dl~p~Nili 148 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDV-----RLL-EDPEELYDQILELMRKLYREAG---LVHGDLSEYNILV 148 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhh-----hhc-ccHHHHHHHHHHHHHHHhhccC---cCcCCCChhhEEE
Confidence 444443 245899999998654322 2110 011 5678899999999999998 76 9999999999999
Q ss_pred cCCCcceeccccccccc
Q 003605 546 EHDFTPKVSDFGLARSA 562 (808)
Q Consensus 546 d~~~~vKL~DFGLa~~~ 562 (808)
+ ++.++|+|||++...
T Consensus 149 ~-~~~~~liDfg~a~~~ 164 (187)
T cd05119 149 D-DGKVYIIDVPQAVEI 164 (187)
T ss_pred E-CCcEEEEECcccccc
Confidence 9 889999999999754
No 432
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.55 E-value=3.1e-15 Score=177.55 Aligned_cols=210 Identities=22% Similarity=0.324 Sum_probs=141.0
Q ss_pred HhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEe
Q 003605 407 ATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYE 485 (808)
Q Consensus 407 at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~E 485 (808)
...+|+.+++|..|+||.||..+++ ..+.+|+|+-++. .+++- ++.....+.+|
T Consensus 81 ~e~df~~IklisngAygavylvrh~~trqrfa~kiNkq~------lilRn--ilt~a~npfvv----------------- 135 (1205)
T KOG0606|consen 81 SESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQN------LILRN--ILTFAGNPFVV----------------- 135 (1205)
T ss_pred CccccceeEeeccCCCCceeeeeccccccchhhcccccc------hhhhc--cccccCCccee-----------------
Confidence 3468899999999999999999876 4567888543321 11110 22222223222
Q ss_pred ecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccc
Q 003605 486 LIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDE 565 (808)
Q Consensus 486 y~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~ 565 (808)
|+-...+.. -..+.- +.+.+++|||+.+ |+|||+|++|.+|..-|.+|+.|||+.+.....
T Consensus 136 ----gDc~tllk~----~g~lPv--------dmvla~Eylh~yg---ivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms 196 (1205)
T KOG0606|consen 136 ----GDCATLLKN----IGPLPV--------DMVLAVEYLHSYG---IVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMS 196 (1205)
T ss_pred ----chhhhhccc----CCCCcc--------hhhHHhHhhccCC---eecCCCCCCcceeeecccccccchhhhhhhhhh
Confidence 333333421 112221 2277899999888 999999999999999999999999998743221
Q ss_pred cc-------------cccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhh
Q 003605 566 ES-------------RHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPL 632 (808)
Q Consensus 566 ~~-------------~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~ 632 (808)
.. ......++||+.|+|||++..+.|....|.|++|+|+||.+-|..||+...++ .|+..+...
T Consensus 197 ~atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdtpe---elfg~visd 273 (1205)
T KOG0606|consen 197 LATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE---ELFGQVISD 273 (1205)
T ss_pred ccchhhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCCHH---HHHhhhhhh
Confidence 11 11123468999999999999999999999999999999999999999865432 222111000
Q ss_pred cccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCC
Q 003605 633 LTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRP 675 (808)
Q Consensus 633 ~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RP 675 (808)
. .+. .+-......+..+++.+.|+.+|..|-
T Consensus 274 ~--i~w----------pE~dea~p~Ea~dli~~LL~qnp~~Rl 304 (1205)
T KOG0606|consen 274 D--IEW----------PEEDEALPPEAQDLIEQLLRQNPLCRL 304 (1205)
T ss_pred h--ccc----------cccCcCCCHHHHHHHHHHHHhChHhhc
Confidence 0 000 011223345778899999999999995
No 433
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.51 E-value=7.1e-14 Score=147.50 Aligned_cols=135 Identities=22% Similarity=0.282 Sum_probs=105.7
Q ss_pred eeee-ecCcEEEEEEEeeCCCEEEEEEeeccc-------------chhhHHHHHHHHHHhhcccccc--eeEEeeeeecc
Q 003605 415 RILG-EGGFGLVYSGVLDDGTKVAVKVLKRVD-------------QQGGREFLAEVEMLSRLHHRNL--VKLIGICIEEQ 478 (808)
Q Consensus 415 ~~LG-~G~fG~VYkg~l~dg~~VAVK~lk~~~-------------~~~~~~f~~Ei~iL~~L~HpNI--V~L~g~~~~~~ 478 (808)
.+|| .|+.|+||++... +..++||+++... ......+.+|++++.+|+|.+| ++.++++..+.
T Consensus 37 ~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~ 115 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH 115 (239)
T ss_pred ceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence 5788 8999999998875 7789999885311 1233568889999999998875 77777754432
Q ss_pred c----eEEEEeecCC-CCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCccee
Q 003605 479 A----RCLVYELIPN-GSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKV 553 (808)
Q Consensus 479 ~----~~LV~Ey~~~-GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL 553 (808)
. .++|+||+++ .+|.+++.. ..++.. .+.+++.+|.+||+.+ |+||||||.|||++.++.++|
T Consensus 116 ~~~~~~~lV~e~l~G~~~L~~~l~~-----~~l~~~----~~~~i~~~l~~lH~~G---I~HrDlkp~NILv~~~~~v~L 183 (239)
T PRK01723 116 GLFYRADILIERIEGARDLVALLQE-----APLSEE----QWQAIGQLIARFHDAG---VYHADLNAHNILLDPDGKFWL 183 (239)
T ss_pred CcceeeeEEEEecCCCCCHHHHHhc-----CCCCHH----HHHHHHHHHHHHHHCC---CCCCCCCchhEEEcCCCCEEE
Confidence 2 2599999997 689888742 234433 3567899999999998 999999999999999889999
Q ss_pred ccccccccc
Q 003605 554 SDFGLARSA 562 (808)
Q Consensus 554 ~DFGLa~~~ 562 (808)
+|||.+...
T Consensus 184 IDfg~~~~~ 192 (239)
T PRK01723 184 IDFDRGELR 192 (239)
T ss_pred EECCCcccC
Confidence 999998753
No 434
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.47 E-value=7.6e-15 Score=173.18 Aligned_cols=255 Identities=22% Similarity=0.265 Sum_probs=186.9
Q ss_pred CcceeeeeeecCcEEEEEEEeeC--CCEEEEEEeeccc--chhhHHHHHHHHHHhhcc-cccceeEEeeeeeccceEEEE
Q 003605 410 NFDASRILGEGGFGLVYSGVLDD--GTKVAVKVLKRVD--QQGGREFLAEVEMLSRLH-HRNLVKLIGICIEEQARCLVY 484 (808)
Q Consensus 410 ~f~~~~~LG~G~fG~VYkg~l~d--g~~VAVK~lk~~~--~~~~~~f~~Ei~iL~~L~-HpNIV~L~g~~~~~~~~~LV~ 484 (808)
.|.+.+.||+|.|+.|-...... ...+|+|.+.... ....+....|..+-..+. |.|++.+++...+.+..+++.
T Consensus 21 ~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~~~ 100 (601)
T KOG0590|consen 21 QYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLLSL 100 (601)
T ss_pred cccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccccc
Confidence 45556679999999998776532 3456677665432 222334445777777776 999999999999999999999
Q ss_pred eecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHH-hcCCCcEEeeeecccCeeecCCC-cceeccccccccc
Q 003605 485 ELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLH-EDSSPRVIHRDFKSSNILLEHDF-TPKVSDFGLARSA 562 (808)
Q Consensus 485 Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH-~~~~p~IiHrDIKpsNILLd~~~-~vKL~DFGLa~~~ 562 (808)
||..++++.+.+.. ......+....-....|+..++.|+| ..+ +.||||||+|.+++..+ ..+++|||+|..+
T Consensus 101 ~~s~g~~~f~~i~~--~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~---~~h~~ikP~n~~l~~s~~~l~~~df~~At~~ 175 (601)
T KOG0590|consen 101 SYSDGGSLFSKISH--PDSTGTSSSSASRYLPQLNSGLSYLHPENG---VTHRDIKPSNSLLDESGSALKIADFGLATAY 175 (601)
T ss_pred Cccccccccccccc--CCccCCCCcchhhhhhhhccCccccCcccc---cccCCCCCccchhccCCCcccCCCchhhccc
Confidence 99999999988831 12223455666778899999999999 777 99999999999999999 9999999999877
Q ss_pred cc-cccccccccccc-ccccccchhhhcC-CCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccccccc
Q 003605 563 MD-EESRHISTRVMG-TFGYVAPEYAMTG-HLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGL 639 (808)
Q Consensus 563 ~~-~~~~~~~~~~~G-t~~Y~APE~l~~~-~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l 639 (808)
.. ...........| ++.|+|||...+. ......|+||.|+++.-+++|..|++...... .....|.... ..
T Consensus 176 ~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~-~~~~~~~~~~----~~- 249 (601)
T KOG0590|consen 176 RNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKD-GRYSSWKSNK----GR- 249 (601)
T ss_pred cccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCcccccccc-ccceeecccc----cc-
Confidence 66 444444455677 9999999988874 44677899999999999999999998655432 2222332111 00
Q ss_pred ccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 640 ERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 640 ~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
.. ...-........++..+++..++..|.+.+++..
T Consensus 250 ---~~----~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~~ 285 (601)
T KOG0590|consen 250 ---FT----QLPWNSISDQAHDLLHKILKENPSNRLSIEELKL 285 (601)
T ss_pred ---cc----cCccccCChhhhhcccccccCCchhccccccccc
Confidence 00 0011122345677888899899999999888743
No 435
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.41 E-value=6.6e-13 Score=151.87 Aligned_cols=145 Identities=25% Similarity=0.253 Sum_probs=103.8
Q ss_pred CCcceeeeeeecCcEEEEEEEeeCCCEEEEEEeecccchh----------------------------------------
Q 003605 409 GNFDASRILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQG---------------------------------------- 448 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~~---------------------------------------- 448 (808)
..|+ .+.||.|++|.||+|++.+|+.||||+.+......
T Consensus 118 ~~fd-~~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~ 196 (437)
T TIGR01982 118 AEFE-EKPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRR 196 (437)
T ss_pred hhCC-CcceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHH
Confidence 3444 36899999999999999999999999985321100
Q ss_pred hHHHHHHHHHHhhcc----cccceeEEeeeee-ccceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHH-HH
Q 003605 449 GREFLAEVEMLSRLH----HRNLVKLIGICIE-EQARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAAR-AL 522 (808)
Q Consensus 449 ~~~f~~Ei~iL~~L~----HpNIV~L~g~~~~-~~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~-gL 522 (808)
+-+|.+|.+.+.+++ |.+-+.+-..+.+ ....+|||||+++++|.+++.... ... .+.+++..+++ .+
T Consensus 197 Eldf~~Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~---~~~---~~~~ia~~~~~~~l 270 (437)
T TIGR01982 197 ELDLRREAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDE---AGL---DRKALAENLARSFL 270 (437)
T ss_pred HHCHHHHHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHh---cCC---CHHHHHHHHHHHHH
Confidence 113556666666653 3333443333322 345799999999999998764211 112 24566776666 47
Q ss_pred HHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccc
Q 003605 523 AYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAM 563 (808)
Q Consensus 523 ~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~ 563 (808)
..+|..+ ++|+|++|.||+++.+++++++|||++..+.
T Consensus 271 ~ql~~~g---~~H~D~hPgNilv~~~g~i~liDfG~~~~l~ 308 (437)
T TIGR01982 271 NQVLRDG---FFHADLHPGNIFVLKDGKIIALDFGIVGRLS 308 (437)
T ss_pred HHHHhCC---ceeCCCCcccEEECCCCcEEEEeCCCeeECC
Confidence 8899888 9999999999999999999999999997654
No 436
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.37 E-value=2.3e-13 Score=144.67 Aligned_cols=205 Identities=22% Similarity=0.303 Sum_probs=142.5
Q ss_pred HHHhhcccccceeEEeeeeecc-----ceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC
Q 003605 457 EMLSRLHHRNLVKLIGICIEEQ-----ARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSP 531 (808)
Q Consensus 457 ~iL~~L~HpNIV~L~g~~~~~~-----~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p 531 (808)
..|-.+-|-|||++..|+.+.. ...++.|||..|+|..+|+...+....+......+|+-||..||.|||+. .|
T Consensus 119 dnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~-~P 197 (458)
T KOG1266|consen 119 DNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC-DP 197 (458)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc-CC
Confidence 3455567999999999987543 45899999999999999987776677788888899999999999999987 68
Q ss_pred cEEeeeecccCeeecCCCcceeccccc--ccccccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHh
Q 003605 532 RVIHRDFKSSNILLEHDFTPKVSDFGL--ARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLS 609 (808)
Q Consensus 532 ~IiHrDIKpsNILLd~~~~vKL~DFGL--a~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlT 609 (808)
+|+|+++..+-|++..++-+|+.---- ...........-.....+-++|.+||+=.....+.++|||+||...+||.-
T Consensus 198 piihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlemai 277 (458)
T KOG1266|consen 198 PIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMAI 277 (458)
T ss_pred ccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHHH
Confidence 899999999999999998888742110 000000000111122346789999998777777889999999999999988
Q ss_pred CCCC-CCCCCCCCcchhHHhhhhhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHH
Q 003605 610 GRKP-VDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQA 683 (808)
Q Consensus 610 G~~P-~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~ 683 (808)
|..- -+.... ... ++.....+- .+.+. .-..++..|++.+|..||+|++++..
T Consensus 278 lEiq~tnseS~--~~~-----------ee~ia~~i~-~len~-------lqr~~i~kcl~~eP~~rp~ar~llfH 331 (458)
T KOG1266|consen 278 LEIQSTNSESK--VEV-----------EENIANVII-GLENG-------LQRGSITKCLEGEPNGRPDARLLLFH 331 (458)
T ss_pred heeccCCCcce--eeh-----------hhhhhhhee-eccCc-------cccCcCcccccCCCCCCcchhhhhcC
Confidence 7642 111100 000 000000000 00010 11246789999999999999998754
No 437
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.27 E-value=3.7e-12 Score=145.39 Aligned_cols=248 Identities=23% Similarity=0.250 Sum_probs=177.5
Q ss_pred Ccceeeeeee--cCcEEEEEEEe--e-CCCEEEEEEeec--ccchhhHHHHHHHHHHhhcc-cccceeEEeeeeeccceE
Q 003605 410 NFDASRILGE--GGFGLVYSGVL--D-DGTKVAVKVLKR--VDQQGGREFLAEVEMLSRLH-HRNLVKLIGICIEEQARC 481 (808)
Q Consensus 410 ~f~~~~~LG~--G~fG~VYkg~l--~-dg~~VAVK~lk~--~~~~~~~~f~~Ei~iL~~L~-HpNIV~L~g~~~~~~~~~ 481 (808)
.|...+.+|. |.+|.||++.. . ++..+|+|+-+. ........=.+|+....+++ |+|.++....+...+..+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF 194 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence 4556788999 99999999987 3 678899998543 22233333456777777774 999999999999999999
Q ss_pred EEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHH----HHHHHHhcCCCcEEeeeecccCeeecCC-Ccceeccc
Q 003605 482 LVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAAR----ALAYLHEDSSPRVIHRDFKSSNILLEHD-FTPKVSDF 556 (808)
Q Consensus 482 LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~----gL~yLH~~~~p~IiHrDIKpsNILLd~~-~~vKL~DF 556 (808)
+-+|++ +.+|.++.+.... .+.....+.+..+... ||.++|... ++|-|+|+.||++..+ ...+++||
T Consensus 195 iqtE~~-~~sl~~~~~~~~~---~~p~~~l~~~~~~~~~~~~~al~~~hs~~---~~~~~~kp~~i~~~~~~~s~~~~df 267 (524)
T KOG0601|consen 195 IQTELC-GESLQSYCHTPCN---FLPDNLLWNSLRDWLSRDVTALSHLHSNN---IVHDDLKPANIFTTSDWTSCKLTDF 267 (524)
T ss_pred eeeccc-cchhHHhhhcccc---cCCchhhhhHHhhhhhcccccccccCCCc---ccccccchhheecccccceeecCCc
Confidence 999999 4788888874322 2444555666666666 999999887 9999999999999999 88999999
Q ss_pred ccccccccccccc---cccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhc
Q 003605 557 GLARSAMDEESRH---ISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLL 633 (808)
Q Consensus 557 GLa~~~~~~~~~~---~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~ 633 (808)
|+...+.+..... ...+..|...|++||.+ ++.++.++|||++|.+.+|-.+|........ ...|.+
T Consensus 268 ~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~-~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~------~~~W~~--- 337 (524)
T KOG0601|consen 268 GLVSKISDGNFSSVFKVSKRPEGDCIYAAKELL-NGLATFASDIFSLGEVILEAILGSHLPSVGK------NSSWSQ--- 337 (524)
T ss_pred ceeEEccCCccccceeeeecCCCCceEeChhhh-ccccchHhhhcchhhhhHhhHhhcccccCCC------CCCccc---
Confidence 9998776554222 22334678899999965 5577899999999999999999876543211 112221
Q ss_pred ccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHH
Q 003605 634 TSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQ 682 (808)
Q Consensus 634 ~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~ 682 (808)
++... +..++...-..++...+.++++.++..|++.+.+..
T Consensus 338 -----~r~~~---ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 338 -----LRQGY---IPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred -----ccccc---CchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 11111 111121222344555889999999999998877654
No 438
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.25 E-value=1.9e-11 Score=120.28 Aligned_cols=131 Identities=18% Similarity=0.067 Sum_probs=98.1
Q ss_pred eeeeeecCcEEEEEEEeeCCCEEEEEEeecccchhhHHHHHHHHHHhhcccccce-eEEeeeeeccceEEEEeecCCCCc
Q 003605 414 SRILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLV-KLIGICIEEQARCLVYELIPNGSV 492 (808)
Q Consensus 414 ~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV-~L~g~~~~~~~~~LV~Ey~~~GsL 492 (808)
.+.|+.|.++.||++... +..+++|....... ....+.+|++++..+.+.+++ +++++. ....++||||+++.++
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~--~~~~~lv~e~i~G~~l 78 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFD--PETGVLITEFIEGSEL 78 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEe--CCCCeEEEEecCCCcc
Confidence 367899999999999875 77899998764321 233567899999999766654 444433 2345899999999887
Q ss_pred cccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcC--CCcEEeeeecccCeeecCCCcceecccccccc
Q 003605 493 ESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDS--SPRVIHRDFKSSNILLEHDFTPKVSDFGLARS 561 (808)
Q Consensus 493 ~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~--~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~ 561 (808)
.+.. .....++.+++++|+.||..+ ...++|+|+++.||+++ ++.++++|||.+..
T Consensus 79 ~~~~------------~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~ 136 (170)
T cd05151 79 LTED------------FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM 136 (170)
T ss_pred cccc------------ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence 6431 011245678999999999886 23469999999999999 66899999999763
No 439
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.22 E-value=7.2e-12 Score=145.73 Aligned_cols=148 Identities=20% Similarity=0.195 Sum_probs=96.3
Q ss_pred HhCCcceeeeeeecCcEEEEEEEeeC-CCEEEEEEeecccc----------------------------------hhh--
Q 003605 407 ATGNFDASRILGEGGFGLVYSGVLDD-GTKVAVKVLKRVDQ----------------------------------QGG-- 449 (808)
Q Consensus 407 at~~f~~~~~LG~G~fG~VYkg~l~d-g~~VAVK~lk~~~~----------------------------------~~~-- 449 (808)
....|+. +.||.|++|.||+|++.+ |+.||||+++..-. +-.
T Consensus 118 ~F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~ 196 (537)
T PRK04750 118 WFDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKT 196 (537)
T ss_pred HHHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHH
Confidence 3456776 789999999999999987 99999999963210 001
Q ss_pred ----HHHHHHHHHHhhcc----cccceeEEeeeee-ccceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHH-
Q 003605 450 ----REFLAEVEMLSRLH----HRNLVKLIGICIE-EQARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAA- 519 (808)
Q Consensus 450 ----~~f~~Ei~iL~~L~----HpNIV~L~g~~~~-~~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia- 519 (808)
-+|.+|+..+.+++ +.+.+.+-.++.+ ....+|||||++|+.|.++-.- .. ...+. ..++...+
T Consensus 197 l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l-~~--~g~d~---~~la~~~v~ 270 (537)
T PRK04750 197 LHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAAL-RA--AGTDM---KLLAERGVE 270 (537)
T ss_pred HHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHH-Hh--cCCCH---HHHHHHHHH
Confidence 12445555555553 3334444444433 3567899999999999874211 11 11221 12222222
Q ss_pred HHHHHHHhcCCCcEEeeeecccCeeecCCC----cceeccccccccccc
Q 003605 520 RALAYLHEDSSPRVIHRDFKSSNILLEHDF----TPKVSDFGLARSAMD 564 (808)
Q Consensus 520 ~gL~yLH~~~~p~IiHrDIKpsNILLd~~~----~vKL~DFGLa~~~~~ 564 (808)
.-+..++..+ ++|+|+||.||+++.++ ++++.|||++..+..
T Consensus 271 ~~~~Qif~~G---ffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 271 VFFTQVFRDG---FFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred HHHHHHHhCC---eeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 2233445566 99999999999999887 999999999976644
No 440
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.14 E-value=3.3e-10 Score=115.91 Aligned_cols=142 Identities=22% Similarity=0.296 Sum_probs=112.1
Q ss_pred eeeeecCcEEEEEEEeeCCCEEEEEEeecccc-hhhHHHHHHHHHHhhccc--ccceeEEeeeeecc---ceEEEEeecC
Q 003605 415 RILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQ-QGGREFLAEVEMLSRLHH--RNLVKLIGICIEEQ---ARCLVYELIP 488 (808)
Q Consensus 415 ~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~-~~~~~f~~Ei~iL~~L~H--pNIV~L~g~~~~~~---~~~LV~Ey~~ 488 (808)
+.|+.|.++.||++...+|+.+++|....... ....++..|++++..+++ .++.+++.++.... ..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 57899999999999987778999999764322 235678999999999975 34577888776542 5689999999
Q ss_pred CCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcC---------------------------------------
Q 003605 489 NGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDS--------------------------------------- 529 (808)
Q Consensus 489 ~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~--------------------------------------- 529 (808)
+.++.+.+.. ..++..++..++.+++++|++||+..
T Consensus 84 G~~l~~~~~~-----~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (223)
T cd05154 84 GRVLRDRLLR-----PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAME 158 (223)
T ss_pred CEecCCCCCC-----CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHH
Confidence 9988886631 24777888888889999999998531
Q ss_pred --------------CCcEEeeeecccCeeecC--CCcceecccccccc
Q 003605 530 --------------SPRVIHRDFKSSNILLEH--DFTPKVSDFGLARS 561 (808)
Q Consensus 530 --------------~p~IiHrDIKpsNILLd~--~~~vKL~DFGLa~~ 561 (808)
...++|+|+++.||+++. ++.+.|+||+.+..
T Consensus 159 ~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 159 RLLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 245899999999999998 56689999998764
No 441
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.09 E-value=4.9e-10 Score=129.45 Aligned_cols=166 Identities=22% Similarity=0.264 Sum_probs=126.8
Q ss_pred eeCCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEeecCCCCccccccccccCCCCCCHH
Q 003605 430 LDDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYELIPNGSVESHLHGVDKESAPLGWD 509 (808)
Q Consensus 430 l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~ 509 (808)
..++..|.|+..+...........+-++.|+.|+||||++++..+..++..|||+|-+ --|..++.. +...
T Consensus 34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV--~Pl~~~lk~-------l~~~ 104 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERV--RPLETVLKE-------LGKE 104 (690)
T ss_pred eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeecc--ccHHHHHHH-------hHHH
Confidence 3478889999888665544455677788999999999999999999999999999988 366777742 2345
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccccccccccccccccccchhhhcC
Q 003605 510 ARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRHISTRVMGTFGYVAPEYAMTG 589 (808)
Q Consensus 510 ~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~ 589 (808)
.....+.||+.||.|||+.+ .++|++|.-+.|++++.|+-||++|.++........ ......--..|..|+.+...
T Consensus 105 ~v~~Gl~qIl~AL~FL~~d~--~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~--~~~~~~~~~s~~~P~~~~~s 180 (690)
T KOG1243|consen 105 EVCLGLFQILAALSFLNDDC--NLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA--PAKSLYLIESFDDPEEIDPS 180 (690)
T ss_pred HHHHHHHHHHHHHHHHhccC--CeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc--ccccchhhhcccChhhcCcc
Confidence 56667889999999999776 599999999999999999999999998865432221 01111122356777754332
Q ss_pred CCccccceeeHHHHHHHHHhC
Q 003605 590 HLLVKSDVYSYGVVILELLSG 610 (808)
Q Consensus 590 ~~s~kSDVwSfGvvLlELlTG 610 (808)
. -..|.|-|||+++|++.|
T Consensus 181 ~--~s~D~~~Lg~li~el~ng 199 (690)
T KOG1243|consen 181 E--WSIDSWGLGCLIEELFNG 199 (690)
T ss_pred c--cchhhhhHHHHHHHHhCc
Confidence 2 346999999999999999
No 442
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.03 E-value=2.2e-09 Score=109.99 Aligned_cols=135 Identities=19% Similarity=0.202 Sum_probs=98.0
Q ss_pred eeeeecCcEEEEEEEeeC-------CCEEEEEEeecc-------------c---------chhhHHHH----HHHHHHhh
Q 003605 415 RILGEGGFGLVYSGVLDD-------GTKVAVKVLKRV-------------D---------QQGGREFL----AEVEMLSR 461 (808)
Q Consensus 415 ~~LG~G~fG~VYkg~l~d-------g~~VAVK~lk~~-------------~---------~~~~~~f~----~Ei~iL~~ 461 (808)
..||.|--+.||.|...+ +..+|||+.+.. + ....+.+. +|++.|.+
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 468999999999998553 479999987420 0 01122333 79999999
Q ss_pred ccc--ccceeEEeeeeeccceEEEEeecCCCCccc-cccccccCCCCCCHHHHHHHHHHHHHHHHHH-HhcCCCcEEeee
Q 003605 462 LHH--RNLVKLIGICIEEQARCLVYELIPNGSVES-HLHGVDKESAPLGWDARLKIALGAARALAYL-HEDSSPRVIHRD 537 (808)
Q Consensus 462 L~H--pNIV~L~g~~~~~~~~~LV~Ey~~~GsL~~-~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yL-H~~~~p~IiHrD 537 (808)
+.. -++...+++ ...+|||||+.++.+.. .|+ ...++..+...+..+++.+|.+| |+.+ |||+|
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lk-----d~~~~~~~~~~i~~~i~~~l~~l~H~~g---lVHGD 150 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLK-----DAKLNDEEMKNAYYQVLSMMKQLYKECN---LVHAD 150 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhh-----ccccCHHHHHHHHHHHHHHHHHHHHhCC---eecCC
Confidence 964 456667754 45689999997653322 221 11344456677889999999999 7887 99999
Q ss_pred ecccCeeecCCCcceeccccccccc
Q 003605 538 FKSSNILLEHDFTPKVSDFGLARSA 562 (808)
Q Consensus 538 IKpsNILLd~~~~vKL~DFGLa~~~ 562 (808)
|++.|||+++ +.++|+|||.+...
T Consensus 151 Ls~~NIL~~~-~~v~iIDF~qav~~ 174 (197)
T cd05146 151 LSEYNMLWHD-GKVWFIDVSQSVEP 174 (197)
T ss_pred CCHHHEEEEC-CcEEEEECCCceeC
Confidence 9999999974 68999999988644
No 443
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.03 E-value=2e-10 Score=131.41 Aligned_cols=250 Identities=21% Similarity=0.191 Sum_probs=177.4
Q ss_pred HHHhCCcceeeeeeecCcEEEEEEEee--CCCEEEEEEeecccchhhH--HHHHHHHHHhhc-ccccceeEEeeeeeccc
Q 003605 405 EKATGNFDASRILGEGGFGLVYSGVLD--DGTKVAVKVLKRVDQQGGR--EFLAEVEMLSRL-HHRNLVKLIGICIEEQA 479 (808)
Q Consensus 405 ~~at~~f~~~~~LG~G~fG~VYkg~l~--dg~~VAVK~lk~~~~~~~~--~f~~Ei~iL~~L-~HpNIV~L~g~~~~~~~ 479 (808)
...+.+|.+...||.|.|+.|++...+ ++..+++|.+.+....... .-+.|+-+...+ .|.|+++.+..+..-++
T Consensus 261 s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~ 340 (524)
T KOG0601|consen 261 SCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQ 340 (524)
T ss_pred eeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccc
Confidence 345678999999999999999988754 6788999988754333222 234566666666 48899998888877788
Q ss_pred eEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCC-Ccceeccccc
Q 003605 480 RCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHD-FTPKVSDFGL 558 (808)
Q Consensus 480 ~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~-~~vKL~DFGL 558 (808)
.++=-|||+++++...+ .....++...++++..+++.++.++|+.. ++|+|+||+||++..+ +..++.|||+
T Consensus 341 ~~ip~e~~~~~s~~l~~----~~~~~~d~~~~~~~~~q~~~~l~~i~s~~---~~~~d~~psni~i~~~~~~~~~~~~~~ 413 (524)
T KOG0601|consen 341 GYIPLEFCEGGSSSLRS----VTSQMLDEDPRLRLTAQILTALNVIHSKL---FVHLDVKPSNILISNDGFFSKLGDFGC 413 (524)
T ss_pred ccCchhhhcCcchhhhh----HHHHhcCcchhhhhHHHHHhccccccchh---hhcccccccceeeccchhhhhcccccc
Confidence 88999999999887766 22345778889999999999999999776 9999999999999876 8899999999
Q ss_pred cccccccccccccccccccccc-ccchhhhcCCCccccceeeHHHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhccccc
Q 003605 559 ARSAMDEESRHISTRVMGTFGY-VAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSRE 637 (808)
Q Consensus 559 a~~~~~~~~~~~~~~~~Gt~~Y-~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~ 637 (808)
+..+.-... ...-.+..| .+++......+..+.|+||||.-+.|.++|..--. +.+.|..
T Consensus 414 ~t~~~~~~~----~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~--------~~~~~~~------- 474 (524)
T KOG0601|consen 414 WTRLAFSSG----VFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSE--------SGVQSLT------- 474 (524)
T ss_pred ccccceecc----cccccccccccchhhccccccccccccccccccccccccCcccCc--------cccccee-------
Confidence 863211110 111122233 35555556678899999999999999999865321 1122211
Q ss_pred ccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHHHHHHHH
Q 003605 638 GLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEVVQALKL 686 (808)
Q Consensus 638 ~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eVl~~Le~ 686 (808)
+....+ ...+.. ...+..++..+...++..||.+.++..+.+.
T Consensus 475 ----i~~~~~-p~~~~~-~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~ 517 (524)
T KOG0601|consen 475 ----IRSGDT-PNLPGL-KLQLQVLLKVMINPDRKRRPSAVELSLHSEF 517 (524)
T ss_pred ----eecccc-cCCCch-HHhhhhhhhhhcCCccccchhhhhhcccchh
Confidence 000000 011111 2567778888999999999999888766553
No 444
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.90 E-value=1.1e-08 Score=115.15 Aligned_cols=169 Identities=17% Similarity=0.245 Sum_probs=127.6
Q ss_pred cEEEEEEEee-CCCEEEEEEeecccchhhHHHHHHHHHHhhcccccceeEEeeeee----ccceEEEEeecCC-CCcccc
Q 003605 422 FGLVYSGVLD-DGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVKLIGICIE----EQARCLVYELIPN-GSVESH 495 (808)
Q Consensus 422 fG~VYkg~l~-dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~----~~~~~LV~Ey~~~-GsL~~~ 495 (808)
-.+.||+... ||..|++||++....+.......-+++++++.|.|+|+|..++.. +..++|||+|+++ ++|.++
T Consensus 289 ~~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~ 368 (655)
T KOG3741|consen 289 SITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDL 368 (655)
T ss_pred cceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHH
Confidence 4678999855 899999999954333333333455789999999999999998763 4567999999985 467665
Q ss_pred ccccc-----------cCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccc
Q 003605 496 LHGVD-----------KESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMD 564 (808)
Q Consensus 496 L~~~~-----------~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~ 564 (808)
-.... ..+..+.+..+|.++.|++.||.++|+.| +.-+-|.+++||++.+.+++|+..|.......
T Consensus 369 ~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssG---LAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 369 YFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSG---LACKTLDLKKILVTGKMRIRISGCGIMDVLQE 445 (655)
T ss_pred HccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcC---ceeecccHhHeEeeCcceEEEecccceeeecC
Confidence 43221 12345778899999999999999999998 88899999999999999999998888665433
Q ss_pred ccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCC
Q 003605 565 EESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRK 612 (808)
Q Consensus 565 ~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~ 612 (808)
+.. |-+.. -.+-|.=.||.+++.|.||..
T Consensus 446 d~~----------------~~le~---~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 446 DPT----------------EPLES---QQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred CCC----------------cchhH---HhhhhHHHHHHHHHHHhhccc
Confidence 221 11111 135688899999999999964
No 445
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=98.80 E-value=1.8e-08 Score=101.24 Aligned_cols=131 Identities=20% Similarity=0.293 Sum_probs=98.8
Q ss_pred eeeeecCcEEEEEEEeeCCCEEEEEE-eecc-------cchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEEee
Q 003605 415 RILGEGGFGLVYSGVLDDGTKVAVKV-LKRV-------DQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 415 ~~LG~G~fG~VYkg~l~dg~~VAVK~-lk~~-------~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~Ey 486 (808)
..+.+|+-..+|.+.+- |..+++|. +.+. ..-..++-.+|.++|.+++--.|..-+=|..+.+...++|||
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 35789999999999765 44466663 3221 112234567899999999766665555556667788899999
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccc
Q 003605 487 IPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARS 561 (808)
Q Consensus 487 ~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~ 561 (808)
+++-.|.+.|... +..++..+-+-+.-||..+ |+|+||.++||++..+. +.++||||+..
T Consensus 81 I~G~~lkd~l~~~-----------~~~~~r~vG~~vg~lH~~g---ivHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 81 IEGELLKDALEEA-----------RPDLLREVGRLVGKLHKAG---IVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred eCChhHHHHHHhc-----------chHHHHHHHHHHHHHHhcC---eecCCCccceEEEeCCc-EEEEECCcccc
Confidence 9998888888421 3556777778888899998 99999999999997764 99999999863
No 446
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.80 E-value=1.3e-09 Score=130.69 Aligned_cols=249 Identities=19% Similarity=0.230 Sum_probs=164.2
Q ss_pred HhCCcceeeeeeecCcEEEEEEEee-CCCEEEEEEeeccc---chhhHHHHHHHHHHhhcccccceeEEeeeeeccceEE
Q 003605 407 ATGNFDASRILGEGGFGLVYSGVLD-DGTKVAVKVLKRVD---QQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCL 482 (808)
Q Consensus 407 at~~f~~~~~LG~G~fG~VYkg~l~-dg~~VAVK~lk~~~---~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~L 482 (808)
..+.|.+.+-+..|.++.++.+.-. .|...++|..+... ....+....+-.++-..+||-+++...-+......+|
T Consensus 802 S~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~~L 881 (1205)
T KOG0606|consen 802 SPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPLPL 881 (1205)
T ss_pred CCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCcch
Confidence 3466777778889999999877633 33333444433211 1122222233333333345666665555555678899
Q ss_pred EEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccc
Q 003605 483 VYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSA 562 (808)
Q Consensus 483 V~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~ 562 (808)
+++|+.+++|...||... .++.+........+..+++|||... ++|+|++|.|+|+..++..+++|||.....
T Consensus 882 ~~~~~~~~~~~Skl~~~~----~~saepaRs~i~~~vqs~e~L~s~~---r~h~~~~p~~~l~~~~gh~~l~~~~t~~~v 954 (1205)
T KOG0606|consen 882 VGHYLNGGDLPSKLHNSG----CLSAEPARSPILERVQSLESLHSSL---RKHRDLKPDSLLIAYDGHRPLTDFGTLSKV 954 (1205)
T ss_pred hhHHhccCCchhhhhcCC----CcccccccchhHHHHhhhhccccch---hhcccccccchhhcccCCcccCcccccccc
Confidence 999999999999998533 3443444444556778899999876 899999999999999999999999843211
Q ss_pred ccc-----------------------------cccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCC
Q 003605 563 MDE-----------------------------ESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKP 613 (808)
Q Consensus 563 ~~~-----------------------------~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P 613 (808)
... +.........||..|.+||...+......+|.|++|++++|.++|..|
T Consensus 955 g~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp 1034 (1205)
T KOG0606|consen 955 GLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPP 1034 (1205)
T ss_pred ccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCC
Confidence 100 000111235689999999999999999999999999999999999999
Q ss_pred CCCCCCCCcchhHHhhhhhcccccccccccCCCC-CCCCChhhHHHHHHHHHHccccCCCCCCCHH
Q 003605 614 VDMTQPPGQENLVAWARPLLTSREGLERIIDPSL-GNDVPFDSVAKVAAIASMCVQPEVQHRPFMG 678 (808)
Q Consensus 614 ~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l-~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~ 678 (808)
|+...+... ++.+....+ ....+.+...+..+++...+..++.+|-.+.
T Consensus 1035 ~na~tpq~~----------------f~ni~~~~~~~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1035 FNAETPQQI----------------FENILNRDIPWPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred CCCcchhhh----------------hhccccCCCCCCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 976543211 111111111 0112234445667788888888999997665
No 447
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=98.79 E-value=2.5e-08 Score=99.82 Aligned_cols=142 Identities=21% Similarity=0.310 Sum_probs=104.1
Q ss_pred eeeeeeecCcEEEEEEEeeCCCEEEEEE-eec-------ccchhhHHHHHHHHHHhhcccccceeEEeeeeeccceEEEE
Q 003605 413 ASRILGEGGFGLVYSGVLDDGTKVAVKV-LKR-------VDQQGGREFLAEVEMLSRLHHRNLVKLIGICIEEQARCLVY 484 (808)
Q Consensus 413 ~~~~LG~G~fG~VYkg~l~dg~~VAVK~-lk~-------~~~~~~~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~~LV~ 484 (808)
...+|-+|+-+.|+++.+. |+...||. +.+ ...-...+-.+|+++|.+++--.|.--.=++.+...-.|+|
T Consensus 11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 4578999999999999886 77777774 322 11233467788999999987656655555566666678999
Q ss_pred eecCC-CCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCC---cceeccccccc
Q 003605 485 ELIPN-GSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDF---TPKVSDFGLAR 560 (808)
Q Consensus 485 Ey~~~-GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~---~vKL~DFGLa~ 560 (808)
||+++ -++.+++...... .........++..|-+.+.-||.++ |||+||..+||+|..++ .+.++|||++.
T Consensus 90 E~~~g~~~vk~~i~~~~~~--~~~d~~~~~~~~~iG~~igklH~nd---iiHGDLTTSNill~~~~~~~~~~lIdfgls~ 164 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMED--ESEDEGLAELARRIGELIGKLHDND---IIHGDLTTSNILLRSDGNQITPILIDFGLSS 164 (229)
T ss_pred EeccchhHHHHHHHHHccC--cccchhHHHHHHHHHHHHHHhhhCC---eecccccccceEEecCCCcCceEEEeecchh
Confidence 99965 3788887643221 1222223678888889999999998 99999999999996543 45899999975
No 448
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.70 E-value=1.1e-07 Score=102.37 Aligned_cols=140 Identities=16% Similarity=0.092 Sum_probs=101.1
Q ss_pred eeeeecCcEEEEEEEeeCCCEEEEEEeecccc-----------hhhHHHHHHHHHHhhccccc--ceeEEeeeee-----
Q 003605 415 RILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQ-----------QGGREFLAEVEMLSRLHHRN--LVKLIGICIE----- 476 (808)
Q Consensus 415 ~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~-----------~~~~~f~~Ei~iL~~L~HpN--IV~L~g~~~~----- 476 (808)
+++-+-....|++..+ +|+.+.||+...... .....+.+|.+.+.+|...+ ....+++...
T Consensus 28 e~v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~ 106 (268)
T PRK15123 28 EVFRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPA 106 (268)
T ss_pred cEEecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCc
Confidence 4455444455777666 478899997743221 11124789999999996444 4455666543
Q ss_pred ccceEEEEeecCCC-CccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecC-------C
Q 003605 477 EQARCLVYELIPNG-SVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEH-------D 548 (808)
Q Consensus 477 ~~~~~LV~Ey~~~G-sL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~-------~ 548 (808)
...-+||+|++++- +|.+++.... ....+...+..++.+++..++-||..+ |+|+|++++|||++. +
T Consensus 107 ~~~s~LVte~l~~~~sL~~~~~~~~--~~~~~~~~~~~ll~~la~~i~~LH~~G---i~HgDL~~~NiLl~~~~~~~~~~ 181 (268)
T PRK15123 107 TRTSFIITEDLAPTISLEDYCADWA--TNPPDPRLKRMLIKRVATMVRDMHAAG---INHRDCYICHFLLHLPFPGREED 181 (268)
T ss_pred cceeEEEEeeCCCCccHHHHHHhhc--ccCCCHHHHHHHHHHHHHHHHHHHHCc---CccCCCChhhEEEeccccCCCCC
Confidence 23468999999875 7888874221 123455677889999999999999999 999999999999975 4
Q ss_pred Ccceeccccccc
Q 003605 549 FTPKVSDFGLAR 560 (808)
Q Consensus 549 ~~vKL~DFGLa~ 560 (808)
..+.|+||+.++
T Consensus 182 ~~~~LIDl~r~~ 193 (268)
T PRK15123 182 LKLSVIDLHRAQ 193 (268)
T ss_pred ceEEEEECCccc
Confidence 689999999875
No 449
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.64 E-value=1.2e-07 Score=96.72 Aligned_cols=125 Identities=24% Similarity=0.273 Sum_probs=81.5
Q ss_pred EEEEEEeeCCCEEEEEEeecc---------------c-----------chhhHHHHHHHHHHhhcccc--cceeEEeeee
Q 003605 424 LVYSGVLDDGTKVAVKVLKRV---------------D-----------QQGGREFLAEVEMLSRLHHR--NLVKLIGICI 475 (808)
Q Consensus 424 ~VYkg~l~dg~~VAVK~lk~~---------------~-----------~~~~~~f~~Ei~iL~~L~Hp--NIV~L~g~~~ 475 (808)
.||.|...+|..+|||+.+.. . ........+|.+.|.++..- ++.+++++
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~-- 78 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDY-- 78 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEE--
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEE--
Confidence 489999888999999987420 0 00123467799999999755 45666644
Q ss_pred eccceEEEEeecC--CCCccccccccccCCCCCCHHHHHHHHHHHHHHHHH-HHhcCCCcEEeeeecccCeeecCCCcce
Q 003605 476 EEQARCLVYELIP--NGSVESHLHGVDKESAPLGWDARLKIALGAARALAY-LHEDSSPRVIHRDFKSSNILLEHDFTPK 552 (808)
Q Consensus 476 ~~~~~~LV~Ey~~--~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~y-LH~~~~p~IiHrDIKpsNILLd~~~~vK 552 (808)
...+|||||++ +..+.. |... .++......++.+++..+.. +|..+ |+|+||...|||++++ .+.
T Consensus 79 --~~~~ivME~I~~~G~~~~~-l~~~-----~~~~~~~~~~~~~il~~~~~~~~~~g---ivHGDLs~~NIlv~~~-~~~ 146 (188)
T PF01163_consen 79 --NRNVIVMEYIGEDGVPLPR-LKDV-----DLSPEEPKELLEEILEEIIKMLHKAG---IVHGDLSEYNILVDDG-KVY 146 (188)
T ss_dssp --ETTEEEEE--EETTEEGGC-HHHC-----GGGGSTHHHHHHHHHHHHHHHHHCTT---EEESS-STTSEEEETT-CEE
T ss_pred --eCCEEEEEecCCCccchhh-HHhc-----cccchhHHHHHHHHHHHHHHHHHhcC---ceecCCChhhEEeecc-eEE
Confidence 24479999998 434433 3211 11134456677777775555 56777 9999999999999988 999
Q ss_pred eccccccccc
Q 003605 553 VSDFGLARSA 562 (808)
Q Consensus 553 L~DFGLa~~~ 562 (808)
|+|||.+...
T Consensus 147 iIDf~qav~~ 156 (188)
T PF01163_consen 147 IIDFGQAVDS 156 (188)
T ss_dssp E--GTTEEET
T ss_pred EEecCcceec
Confidence 9999998654
No 450
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.45 E-value=5.3e-06 Score=91.96 Aligned_cols=265 Identities=17% Similarity=0.167 Sum_probs=155.2
Q ss_pred eeeeeeecCcEEEEEEEeeCCCEEEEEEeecccchhhHHHHHHHHHHhhc-ccccceeEEeee------eeccc-eEEEE
Q 003605 413 ASRILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQGGREFLAEVEMLSRL-HHRNLVKLIGIC------IEEQA-RCLVY 484 (808)
Q Consensus 413 ~~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L-~HpNIV~L~g~~------~~~~~-~~LV~ 484 (808)
..+-||+|+-+.+|-. ..-...+-|+...-...... +.++.|... .|+-+-.-+.+= -+++. .-++|
T Consensus 15 ~gr~LgqGgea~ly~l--~e~~d~VAKIYh~Pppa~~a---qk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflm 89 (637)
T COG4248 15 PGRPLGQGGEADLYTL--GEVRDQVAKIYHAPPPAAQA---QKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLM 89 (637)
T ss_pred CCccccCCccceeeec--chhhchhheeecCCCchHHH---HHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEec
Confidence 3467999999999943 22223345776543222222 223344444 455433212110 11222 45667
Q ss_pred eecCCC-Cccccccc--cccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccc
Q 003605 485 ELIPNG-SVESHLHG--VDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARS 561 (808)
Q Consensus 485 Ey~~~G-sL~~~L~~--~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~ 561 (808)
..+.+. -+..++.- .++.-...+|+..++++..+|.+.+-||+.+ .+-+|++++|+|+.++..+.|.|-..-..
T Consensus 90 P~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~G---h~vGDVn~~~~lVsd~~~V~LVdsDsfqi 166 (637)
T COG4248 90 PKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHG---HVVGDVNQNSFLVSDDSKVVLVDSDSFQI 166 (637)
T ss_pred ccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcC---CcccccCccceeeecCceEEEEcccceee
Confidence 766543 12222211 1122345899999999999999999999999 88999999999999999999987543221
Q ss_pred cccccccccccccccccccccchhhh-----cCCCccccceeeHHHHHHHHHhC-CCCCCCCCCCC------cchhHHhh
Q 003605 562 AMDEESRHISTRVMGTFGYVAPEYAM-----TGHLLVKSDVYSYGVVILELLSG-RKPVDMTQPPG------QENLVAWA 629 (808)
Q Consensus 562 ~~~~~~~~~~~~~~Gt~~Y~APE~l~-----~~~~s~kSDVwSfGvvLlELlTG-~~P~~~~~~~~------~~~lv~w~ 629 (808)
...+ ......+|...|.+||.-. +-.-+..+|.|.|||++++|+.| ++||..-.... +.++....
T Consensus 167 -~~ng--~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~g~ 243 (637)
T COG4248 167 -NANG--TLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAHGR 243 (637)
T ss_pred -ccCC--ceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhcce
Confidence 1111 1222346888999999543 22346779999999999999986 99996532211 11111100
Q ss_pred hhhcccccccccccCCCCCCCCChh-hHHHHHHHHHHccccC--CCCCCCHHHHHHHHHHHHHhhh
Q 003605 630 RPLLTSREGLERIIDPSLGNDVPFD-SVAKVAAIASMCVQPE--VQHRPFMGEVVQALKLVCNECD 692 (808)
Q Consensus 630 ~~~~~~~~~l~~ivD~~l~~~~~~~-~~~~l~~Li~~Cl~~d--P~~RPsm~eVl~~Le~i~~~~~ 692 (808)
-. ...+......-. -..++.. ....+..+..+|+... +.-||+.+-.+..|..+.+++.
T Consensus 244 f~-ya~~~~~g~~p~---P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L~ 305 (637)
T COG4248 244 FA-YASDQRRGLKPP---PRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQLK 305 (637)
T ss_pred ee-echhccCCCCCC---CCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhhh
Confidence 00 000000000000 1112222 2345667778888654 5689999999999988777654
No 451
>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.42 E-value=8.4e-07 Score=91.63 Aligned_cols=107 Identities=22% Similarity=0.246 Sum_probs=84.9
Q ss_pred hhHHHHHHHHHHhhccc--ccceeEEeeeeecc----ceEEEEeecCCC-CccccccccccCCCCCCHHHHHHHHHHHHH
Q 003605 448 GGREFLAEVEMLSRLHH--RNLVKLIGICIEEQ----ARCLVYELIPNG-SVESHLHGVDKESAPLGWDARLKIALGAAR 520 (808)
Q Consensus 448 ~~~~f~~Ei~iL~~L~H--pNIV~L~g~~~~~~----~~~LV~Ey~~~G-sL~~~L~~~~~~~~~L~~~~~l~Ia~qia~ 520 (808)
....+.+|...+.+|.. -...+.+++..... ..+||+|++++. +|.+++.... .++......++.++++
T Consensus 54 ~~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~----~~~~~~~~~ll~~l~~ 129 (206)
T PF06293_consen 54 RRSRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWE----QLDPSQRRELLRALAR 129 (206)
T ss_pred cchHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhc----ccchhhHHHHHHHHHH
Confidence 34578889999998864 34566777765532 348999999874 7888885321 1555677889999999
Q ss_pred HHHHHHhcCCCcEEeeeecccCeeecCCC---cceecccccccc
Q 003605 521 ALAYLHEDSSPRVIHRDFKSSNILLEHDF---TPKVSDFGLARS 561 (808)
Q Consensus 521 gL~yLH~~~~p~IiHrDIKpsNILLd~~~---~vKL~DFGLa~~ 561 (808)
.++-||+.+ |+|+|+++.|||++.+. ++.++||+-++.
T Consensus 130 ~i~~lH~~g---i~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~ 170 (206)
T PF06293_consen 130 LIAKLHDAG---IYHGDLNPSNILVDPDDGQYRFYLIDLDRMRF 170 (206)
T ss_pred HHHHHHHCc---CCCCCCCcccEEEeCCCCceeEEEEcchhcee
Confidence 999999999 99999999999998886 899999998764
No 452
>PRK09902 hypothetical protein; Provisional
Probab=98.38 E-value=2.7e-06 Score=88.05 Aligned_cols=139 Identities=18% Similarity=0.128 Sum_probs=103.2
Q ss_pred eeecCcEEEEEEEeeCCCEEEEEEeec-----c-cchhhHHHHHHHHHHhhccc--ccceeEEeeeeec----cceEEEE
Q 003605 417 LGEGGFGLVYSGVLDDGTKVAVKVLKR-----V-DQQGGREFLAEVEMLSRLHH--RNLVKLIGICIEE----QARCLVY 484 (808)
Q Consensus 417 LG~G~fG~VYkg~l~dg~~VAVK~lk~-----~-~~~~~~~f~~Ei~iL~~L~H--pNIV~L~g~~~~~----~~~~LV~ 484 (808)
-|+||.+.|++-.++ |..+-+|+-.. . ...+...|.+|+..|.+|.. -++.+.+.+.... -.-+||+
T Consensus 26 ~~rgG~SgV~r~~~~-g~~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT 104 (216)
T PRK09902 26 YRRNGMSGVQCVERN-GKKLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT 104 (216)
T ss_pred cCCCCcceEEEEEeC-CcEEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence 467899999987776 55788998752 1 14466789999999999964 3345555222221 2348999
Q ss_pred eecCC-CCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCc--ceecccccccc
Q 003605 485 ELIPN-GSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFT--PKVSDFGLARS 561 (808)
Q Consensus 485 Ey~~~-GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~--vKL~DFGLa~~ 561 (808)
|-+.+ -+|.+++... ...+.+...+..+..++++.++-||+.+ +.|+|+.+.|||++.++. ++++||.-++.
T Consensus 105 e~L~g~~~L~~~l~~~--~~~~~~~~~k~~il~~va~~ia~LH~~G---v~Hgdly~khIll~~~g~~~v~lIDlEk~r~ 179 (216)
T PRK09902 105 EDMAGFISIADWYAQH--AVSPYSDEVRQAMLKAVALAFKKMHSVN---RQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR 179 (216)
T ss_pred EeCCCCccHHHHHhcC--CcCCcchHHHHHHHHHHHHHHHHHHHCC---CcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence 98853 4888887432 1224567778899999999999999999 999999999999986666 99999987653
No 453
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.34 E-value=1.9e-07 Score=108.70 Aligned_cols=151 Identities=18% Similarity=0.292 Sum_probs=101.7
Q ss_pred HHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccccccccccccc-------cccccccccccchhhhc
Q 003605 516 LGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRHIS-------TRVMGTFGYVAPEYAMT 588 (808)
Q Consensus 516 ~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~~~-------~~~~Gt~~Y~APE~l~~ 588 (808)
.+++.||.|||... ++||++|.|++|.++.++..||+.|+.+............ --..-...|.|||++..
T Consensus 106 ~~v~dgl~flh~sA--k~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~ 183 (700)
T KOG2137|consen 106 GNVADGLAFLHRSA--KVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG 183 (700)
T ss_pred hcccchhhhhccCc--ceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence 34569999999754 7999999999999999999999999988654331111111 01123457999999999
Q ss_pred CCCccccceeeHHHHHHHHHhCCCC-CCCCCCCCcchhHHhhhhhcccccccccccCCCCCCCCChhhHHHHHHHHHHcc
Q 003605 589 GHLLVKSDVYSYGVVILELLSGRKP-VDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCV 667 (808)
Q Consensus 589 ~~~s~kSDVwSfGvvLlELlTG~~P-~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl 667 (808)
...+.++|+||+||++|-+..|..+ +...... ..+..... ..+.. .-.+..+...++.+-+.+.+
T Consensus 184 ~~~~~~sd~fSlG~li~~i~~~gk~i~~a~~~~-----~~~~~~~~--------~~~~~-~~~~s~~~p~el~~~l~k~l 249 (700)
T KOG2137|consen 184 TTNTPASDVFSLGVLIYTIYNGGKSIIAANGGL-----LSYSFSRN--------LLNAG-AFGYSNNLPSELRESLKKLL 249 (700)
T ss_pred ccccccccceeeeeEEEEEecCCcchhhccCCc-----chhhhhhc--------ccccc-cccccccCcHHHHHHHHHHh
Confidence 8889999999999999999954443 3322111 11110000 00100 01122344567888899999
Q ss_pred ccCCCCCCCHHHHHH
Q 003605 668 QPEVQHRPFMGEVVQ 682 (808)
Q Consensus 668 ~~dP~~RPsm~eVl~ 682 (808)
..+...||++.++..
T Consensus 250 ~~~~~~rp~~~~l~~ 264 (700)
T KOG2137|consen 250 NGDSAVRPTLDLLLS 264 (700)
T ss_pred cCCcccCcchhhhhc
Confidence 999999998877743
No 454
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.30 E-value=3.3e-06 Score=89.66 Aligned_cols=135 Identities=23% Similarity=0.164 Sum_probs=94.6
Q ss_pred cceeeeeeecCcEEEEEEEeeCCCEEEEEEeec----------cc------------chhhHHHHHHHHHHhhcccc--c
Q 003605 411 FDASRILGEGGFGLVYSGVLDDGTKVAVKVLKR----------VD------------QQGGREFLAEVEMLSRLHHR--N 466 (808)
Q Consensus 411 f~~~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~----------~~------------~~~~~~f~~Ei~iL~~L~Hp--N 466 (808)
..+.+.||.|--+.||.|...+|..+|||.=+. .. ........+|.++|.+|.-. .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 345689999999999999999999999996321 00 01223467799999999654 6
Q ss_pred ceeEEeeeeeccceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeec
Q 003605 467 LVKLIGICIEEQARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLE 546 (808)
Q Consensus 467 IV~L~g~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd 546 (808)
+.+.+++ +...+||||+++--|...- ++-...-.|+..|++-+.-+-..+ |||+|+..-|||++
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r---------~~~en~~~il~~il~~~~~~~~~G---iVHGDlSefNIlV~ 236 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLR---------LDVENPDEILDKILEEVRKAYRRG---IVHGDLSEFNILVT 236 (304)
T ss_pred CCCcccc----ccceeeeehcccceeeccc---------CcccCHHHHHHHHHHHHHHHHHcC---ccccCCchheEEEe
Confidence 6666654 4557999999875444321 122223334444444444444666 99999999999999
Q ss_pred CCCcceecccccccc
Q 003605 547 HDFTPKVSDFGLARS 561 (808)
Q Consensus 547 ~~~~vKL~DFGLa~~ 561 (808)
+++.+.++||--+..
T Consensus 237 ~dg~~~vIDwPQ~v~ 251 (304)
T COG0478 237 EDGDIVVIDWPQAVP 251 (304)
T ss_pred cCCCEEEEeCccccc
Confidence 999999999976543
No 455
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.23 E-value=3.2e-06 Score=98.45 Aligned_cols=146 Identities=25% Similarity=0.253 Sum_probs=97.1
Q ss_pred CCcceeeeeeecCcEEEEEEEeeCCCEEEEEEeecccch----------------------------------------h
Q 003605 409 GNFDASRILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQ----------------------------------------G 448 (808)
Q Consensus 409 ~~f~~~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~----------------------------------------~ 448 (808)
..|+. +-|+.++-|.||+|++.+|+.||||+.+..-.. .
T Consensus 126 ~eF~~-~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ 204 (517)
T COG0661 126 SEFEP-EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLRE 204 (517)
T ss_pred HHcCC-CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHH
Confidence 44543 678999999999999999999999997421000 1
Q ss_pred hHHHHHHHHHHhhcc----cccceeEEeeeee-ccceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHH-H
Q 003605 449 GREFLAEVEMLSRLH----HRNLVKLIGICIE-EQARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARA-L 522 (808)
Q Consensus 449 ~~~f~~Ei~iL~~L~----HpNIV~L~g~~~~-~~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~g-L 522 (808)
+-+|.+|...+.+++ +..-+++=..|++ .....|+|||++|-.+.+...-. ...++ +..|+..++++ +
T Consensus 205 ElDy~~EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~---~~g~d---~k~ia~~~~~~f~ 278 (517)
T COG0661 205 ELDYRREAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALK---SAGID---RKELAELLVRAFL 278 (517)
T ss_pred HhCHHHHHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHH---hcCCC---HHHHHHHHHHHHH
Confidence 113455655555553 2223344444443 46779999999998888874311 12344 33344333333 3
Q ss_pred HHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccccc
Q 003605 523 AYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMD 564 (808)
Q Consensus 523 ~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~ 564 (808)
..+-.++ ++|.|..|.||+++.++++.+.|||+......
T Consensus 279 ~q~~~dg---ffHaDpHpGNi~v~~~g~i~~lDfGi~g~l~~ 317 (517)
T COG0661 279 RQLLRDG---FFHADPHPGNILVRSDGRIVLLDFGIVGRLDP 317 (517)
T ss_pred HHHHhcC---ccccCCCccceEEecCCcEEEEcCcceecCCH
Confidence 3444456 99999999999999999999999999875543
No 456
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.19 E-value=1.5e-05 Score=83.79 Aligned_cols=141 Identities=18% Similarity=0.225 Sum_probs=86.4
Q ss_pred eeeeecCcEEEEEEEeeCCCEEEEEEeecccchhhHHHHHHHHHHhhccccc--ceeEEeeeeeccceEEEEeecCCCC-
Q 003605 415 RILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRN--LVKLIGICIEEQARCLVYELIPNGS- 491 (808)
Q Consensus 415 ~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpN--IV~L~g~~~~~~~~~LV~Ey~~~Gs- 491 (808)
..||+|..+.||+. .+..+++|...... ......+|.++++.+..-+ +.+.++++...+...+|||+++|.+
T Consensus 7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~--~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i~G~~~ 81 (226)
T TIGR02172 7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF--DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELIVGKRS 81 (226)
T ss_pred eeecCCCCcceeEe---cCCCEEEEeCCCCC--CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeecCCccc
Confidence 47899999999984 24567788876432 2345688999999997544 4677777777777889999998863
Q ss_pred cccc---------------------ccccccCCCCCCH-HHHH-HHH-------HHHH-HHHHHHHhc-CCCcEEeeeec
Q 003605 492 VESH---------------------LHGVDKESAPLGW-DARL-KIA-------LGAA-RALAYLHED-SSPRVIHRDFK 539 (808)
Q Consensus 492 L~~~---------------------L~~~~~~~~~L~~-~~~l-~Ia-------~qia-~gL~yLH~~-~~p~IiHrDIK 539 (808)
+... ||........+.. ..++ ..+ ..+. ....+|... ..+.++|+|+.
T Consensus 82 ~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~HgD~~ 161 (226)
T TIGR02172 82 FSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCLHGDFQ 161 (226)
T ss_pred hhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceEecCCC
Confidence 2211 1211111111110 0000 000 0001 112223221 13457999999
Q ss_pred ccCeeecCCCcceecccccccc
Q 003605 540 SSNILLEHDFTPKVSDFGLARS 561 (808)
Q Consensus 540 psNILLd~~~~vKL~DFGLa~~ 561 (808)
+.||++++++ +.|+||+.+..
T Consensus 162 ~~Nii~~~~~-~~iIDwe~a~~ 182 (226)
T TIGR02172 162 IGNLITSGKG-TYWIDLGDFGY 182 (226)
T ss_pred CCcEEEcCCC-cEEEechhcCc
Confidence 9999999887 99999998753
No 457
>PF01636 APH: Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.; InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.17 E-value=2.2e-05 Score=80.40 Aligned_cols=145 Identities=22% Similarity=0.243 Sum_probs=87.6
Q ss_pred eeeeeecCcEEEEEEEeeCCCEEEEEEeecccchhhHHHHHHHHHHhhccccc--ceeEEeeeeec---cceEEEEeecC
Q 003605 414 SRILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRN--LVKLIGICIEE---QARCLVYELIP 488 (808)
Q Consensus 414 ~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpN--IV~L~g~~~~~---~~~~LV~Ey~~ 488 (808)
.+.|+.|..+.||+....+ ..+++|..... .....+.+|..+++.+.... +.+++.++... ...+++|++++
T Consensus 2 i~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~--~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~~~~i~ 78 (239)
T PF01636_consen 2 IRPLSGGFSNRVYRVTTDD-GRYVLKFYRPP--DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLLMEYIP 78 (239)
T ss_dssp EEEEEESSSSEEEEEEETT-SEEEEEEESSH--HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEEEEEES
T ss_pred CccCCCCCeeeEEEEEECC-cEEEEEEeCCC--CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEEEEEec
Confidence 4689999999999999876 68999987643 45577889999999986443 55677654332 34589999999
Q ss_pred CCCccc----------------c---ccccccCCCCCCHHH---------HHHH------------HHHHHH-HHHHHHh
Q 003605 489 NGSVES----------------H---LHGVDKESAPLGWDA---------RLKI------------ALGAAR-ALAYLHE 527 (808)
Q Consensus 489 ~GsL~~----------------~---L~~~~~~~~~L~~~~---------~l~I------------a~qia~-gL~yLH~ 527 (808)
+..+.. . ||..........+.. .... ...+.+ .++.+++
T Consensus 79 g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (239)
T PF01636_consen 79 GRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLLQELEA 158 (239)
T ss_dssp SEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHHHHHHh
Confidence 888777 1 111111111112111 0000 111222 3344443
Q ss_pred c----CCCcEEeeeecccCeeec-CCCcceecccccccc
Q 003605 528 D----SSPRVIHRDFKSSNILLE-HDFTPKVSDFGLARS 561 (808)
Q Consensus 528 ~----~~p~IiHrDIKpsNILLd-~~~~vKL~DFGLa~~ 561 (808)
. ....++|+|+.+.|||++ +++.+.|.||+.+..
T Consensus 159 ~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~ 197 (239)
T PF01636_consen 159 LLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW 197 (239)
T ss_dssp HHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred hhccCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence 2 345699999999999999 666678999988753
No 458
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=98.06 E-value=6.5e-07 Score=103.35 Aligned_cols=193 Identities=18% Similarity=0.134 Sum_probs=138.3
Q ss_pred HHHHhCCcceeeeeeecCcEEEEEEEeeCCCEEEEEEeecccchhhHHHHHHHHHHhhccccc-ceeEEeeeeeccceEE
Q 003605 404 IEKATGNFDASRILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRN-LVKLIGICIEEQARCL 482 (808)
Q Consensus 404 l~~at~~f~~~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpN-IV~L~g~~~~~~~~~L 482 (808)
++..+.-+...+-+++|+++++||.+-.-.+....+.+... ....-++++|.+++||| .+..++-+..++..++
T Consensus 237 lkDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~-----l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~~~~i 311 (829)
T KOG0576|consen 237 LKDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT-----LSRRLAIELLDKVNNPNPVVRYLEDYDGEDYLWI 311 (829)
T ss_pred ccCCccchHHHHHHHHHHhcCCCccCCChhhheeceeeccc-----hhhHHHHHHHHHccCCCCcccccccCCcccccch
Confidence 34444445555678999999999987543334445554322 34556899999999999 7777777877888899
Q ss_pred EEeecCCC-CccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceecccccccc
Q 003605 483 VYELIPNG-SVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARS 561 (808)
Q Consensus 483 V~Ey~~~G-sL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~ 561 (808)
+++++..+ +-..-.. .....+...+...+...-+++++|||+.. =+|+| ||+..+ ...|..||+....
T Consensus 312 ~~~i~s~~rs~~~~~~---~se~~~~~~~~~~~~r~et~~l~~l~~~~---~~~~d----~~l~s~-~~~~~~~~~v~~~ 380 (829)
T KOG0576|consen 312 PMRICSTGRSSALEMT---VSEIALEQYQFAYPLRKETRPLAELHSSY---KVHRD----NILGSE-EEVKLLDFAVPPQ 380 (829)
T ss_pred hhhhhcCCccccccCC---hhhHhhhhhhhhhhhhhhccccccccccc---ccCcc----cccccc-cccccccccCCcc
Confidence 99999877 2222111 11123444455566677788999999764 48999 877765 5899999999876
Q ss_pred cccccccccccccccccccccchhhhcCCCccccceeeHHHHHHHHHhCCCCCC
Q 003605 562 AMDEESRHISTRVMGTFGYVAPEYAMTGHLLVKSDVYSYGVVILELLSGRKPVD 615 (808)
Q Consensus 562 ~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s~kSDVwSfGvvLlELlTG~~P~~ 615 (808)
+.... ......++..|+|||+...+.+..+.|+|++|+-..++.-|-.|-.
T Consensus 381 L~~~~---~~~t~~~~~~~~~pev~~~~~~~~~p~~~~~~~~~~~~ap~~pPr~ 431 (829)
T KOG0576|consen 381 LTRTM---KPRTAIGTPEPLAPEVIQENTIDGCPDSGSLAVSAIQMAPGLPPRS 431 (829)
T ss_pred cCccc---ccccCCCCCCCCCchhhcccccccCCCccCCCcchhhcCCCCCCCC
Confidence 54322 2344568999999999999999999999999998778877776643
No 459
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.05 E-value=2.5e-05 Score=82.18 Aligned_cols=140 Identities=21% Similarity=0.189 Sum_probs=86.9
Q ss_pred eeecCc-EEEEEEEeeCCCEEEEEEeecccchhhHHHHHHHHHHhhcc-cccceeEEeeeeeccceEEEEeecCCCCccc
Q 003605 417 LGEGGF-GLVYSGVLDDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLH-HRNLVKLIGICIEEQARCLVYELIPNGSVES 494 (808)
Q Consensus 417 LG~G~f-G~VYkg~l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~-HpNIV~L~g~~~~~~~~~LV~Ey~~~GsL~~ 494 (808)
|-.|.. ..||+...+ +..++||+..... ..++.+|++++..+. +--+.+++++....+..++|||+++|.+|..
T Consensus 6 ~~~g~~~~~v~~~~~~-~~~~~vk~~~~~~---~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~~ 81 (244)
T cd05150 6 VTEGQSGATVYRLDGK-NPGLYLKIAPSGP---TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPGVPAAA 81 (244)
T ss_pred cCCCCCcCeEEEEcCC-CCcEEEEecCCCc---ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCCccHhH
Confidence 444555 789998765 4788888876432 346778999999884 4445677877766667799999999887764
Q ss_pred cc-------------------cccccCCCCCC--HHHHHHHHH--------------------HHHHHHHHHHhc----C
Q 003605 495 HL-------------------HGVDKESAPLG--WDARLKIAL--------------------GAARALAYLHED----S 529 (808)
Q Consensus 495 ~L-------------------~~~~~~~~~L~--~~~~l~Ia~--------------------qia~gL~yLH~~----~ 529 (808)
.. |.......... +..++.... .+...+..|-.. .
T Consensus 82 ~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 161 (244)
T cd05150 82 LWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEATRPAEE 161 (244)
T ss_pred hhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhhCCCcC
Confidence 42 21111111111 001110000 011122222211 2
Q ss_pred CCcEEeeeecccCeeecCCCcceeccccccc
Q 003605 530 SPRVIHRDFKSSNILLEHDFTPKVSDFGLAR 560 (808)
Q Consensus 530 ~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~ 560 (808)
.+.++|+|+.+.|||++++..+.|+||+.+.
T Consensus 162 ~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~ 192 (244)
T cd05150 162 DLVVTHGDACLPNIIVDPGKFSGFIDLGRLG 192 (244)
T ss_pred ceEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence 3569999999999999998778899999875
No 460
>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.02 E-value=4.5e-05 Score=79.43 Aligned_cols=138 Identities=15% Similarity=0.173 Sum_probs=93.8
Q ss_pred HhCCcceeeeeeecCcEEEEEEEeeCCCEEEEEEeecccchhhHHH---------HHHHHHHhhccc---ccceeEEeee
Q 003605 407 ATGNFDASRILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQGGREF---------LAEVEMLSRLHH---RNLVKLIGIC 474 (808)
Q Consensus 407 at~~f~~~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~~~~~f---------~~Ei~iL~~L~H---pNIV~L~g~~ 474 (808)
..++|...+++-......|.+-.. +|..+++|..+......++.| .+++..+.+++. .....++.++
T Consensus 29 ~~~~~~~~kv~k~~~r~~ValIei-~~~kyIlK~pr~~~~r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~ 107 (229)
T PF06176_consen 29 LDNNYKIIKVFKNTKRNYVALIEI-DGKKYILKEPREENRRPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAA 107 (229)
T ss_pred HhCCceEEEeecCCCccEEEEEEE-CCcEEEEeccchhhhhHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeee
Confidence 557888888888877777766555 478999998875333333332 344555555543 2333333333
Q ss_pred ee-----ccceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCC
Q 003605 475 IE-----EQARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDF 549 (808)
Q Consensus 475 ~~-----~~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~ 549 (808)
.. ....+|+|||++|-.|.++.. ++. .++..++++|.-||+.| +.|+|..|.|++++++
T Consensus 108 ekk~~~~~~~~~ll~EYIeG~~l~d~~~--------i~e----~~~~ki~~~ikqlH~~G---~~HGD~hpgNFlv~~~- 171 (229)
T PF06176_consen 108 EKKIFRYTSSYVLLMEYIEGVELNDIED--------IDE----DLAEKIVEAIKQLHKHG---FYHGDPHPGNFLVSNN- 171 (229)
T ss_pred eeeeccceeEEEEEEEEecCeecccchh--------cCH----HHHHHHHHHHHHHHHcC---CccCCCCcCcEEEECC-
Confidence 22 234478999999988877642 222 24556778899999999 9999999999999865
Q ss_pred cceecccccccc
Q 003605 550 TPKVSDFGLARS 561 (808)
Q Consensus 550 ~vKL~DFGLa~~ 561 (808)
.+++.||+..+.
T Consensus 172 ~i~iID~~~k~~ 183 (229)
T PF06176_consen 172 GIRIIDTQGKRM 183 (229)
T ss_pred cEEEEECccccc
Confidence 599999987653
No 461
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.02 E-value=1.6e-05 Score=92.51 Aligned_cols=141 Identities=18% Similarity=0.168 Sum_probs=91.6
Q ss_pred eeeeecCcEEEEEEEeeCCCEEEEEEeecccch-------------------------------------hhHHHHHHHH
Q 003605 415 RILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQ-------------------------------------GGREFLAEVE 457 (808)
Q Consensus 415 ~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~-------------------------------------~~~~f~~Ei~ 457 (808)
+-||.-+.|.||+|++++|+.||||+-+..-+. .+-+|.+|.+
T Consensus 167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~ 246 (538)
T KOG1235|consen 167 EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAK 246 (538)
T ss_pred chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHH
Confidence 679999999999999999999999996421100 1123666666
Q ss_pred HHhhc----cccc---ceeEEeeeee-ccceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcC
Q 003605 458 MLSRL----HHRN---LVKLIGICIE-EQARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDS 529 (808)
Q Consensus 458 iL~~L----~HpN---IV~L~g~~~~-~~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~ 529 (808)
-..+. +|-+ -|.+-.++++ .....|+||||+|..+.|.-.- ....++-..+..-+.++..-+ |=..|
T Consensus 247 Nae~~~~~f~~~~~~~~V~VP~Vy~~~st~RVLtME~~~G~~i~Dl~~i---~~~gi~~~~i~~~l~~~~~~q--If~~G 321 (538)
T KOG1235|consen 247 NAERFRENFKDFSLLTYVLVPKVYWDLSTKRVLTMEYVDGIKINDLDAI---DKRGISPHDILNKLVEAYLEQ--IFKTG 321 (538)
T ss_pred hHHHHHHHHHhcccccceeCCeehhhcCcceEEEEEecCCccCCCHHHH---HHcCCCHHHHHHHHHHHHHHH--HHhcC
Confidence 55554 3555 1223333333 2577999999999988776421 122355444433333322111 22234
Q ss_pred CCcEEeeeecccCeeecC----CCcceecccccccccc
Q 003605 530 SPRVIHRDFKSSNILLEH----DFTPKVSDFGLARSAM 563 (808)
Q Consensus 530 ~p~IiHrDIKpsNILLd~----~~~vKL~DFGLa~~~~ 563 (808)
++|.|=.|.||+++. ++++.+-|||+.....
T Consensus 322 ---ffHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is 356 (538)
T KOG1235|consen 322 ---FFHADPHPGNILVRPNPEGDEEIVLLDHGLYAVIS 356 (538)
T ss_pred ---CccCCCCCCcEEEecCCCCCccEEEEccccccccc
Confidence 899999999999983 6789999999987654
No 462
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=97.98 E-value=9.9e-05 Score=77.85 Aligned_cols=152 Identities=20% Similarity=0.221 Sum_probs=99.4
Q ss_pred cCCHHHHHHHhCCcceeeeeee---cCcEEEEEEEeeCCCEEEEEEeecccchh---------hHH--------------
Q 003605 398 TFSASEIEKATGNFDASRILGE---GGFGLVYSGVLDDGTKVAVKVLKRVDQQG---------GRE-------------- 451 (808)
Q Consensus 398 ~fs~~el~~at~~f~~~~~LG~---G~fG~VYkg~l~dg~~VAVK~lk~~~~~~---------~~~-------------- 451 (808)
..+++.|....++..+..+.|. |.-..||+|.-.++..+|||+.+...... ..+
T Consensus 34 ~~t~~~l~~L~~rg~i~~~~g~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~ 113 (268)
T COG1718 34 KRTLETLRRLLSRGVITELVGCISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFA 113 (268)
T ss_pred hHHHHHHHHHhcCCceeeeEeeecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHH
Confidence 3566777777777777777664 55567999998889999999986321110 011
Q ss_pred -HHHHHHHHhhcc--cccceeEEeeeeeccceEEEEeecCCC-CccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 003605 452 -FLAEVEMLSRLH--HRNLVKLIGICIEEQARCLVYELIPNG-SVESHLHGVDKESAPLGWDARLKIALGAARALAYLHE 527 (808)
Q Consensus 452 -f~~Ei~iL~~L~--HpNIV~L~g~~~~~~~~~LV~Ey~~~G-sL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~ 527 (808)
..+|+..|.++. +-.+.+-+++. .-.|||||+... .-.-.|. ...+...+...+..++++.+.-|-.
T Consensus 114 W~~kEf~NL~R~~eAGVrvP~Pi~~~----~nVLvMEfIg~~g~pAP~Lk-----Dv~~e~~e~~~~~~~~v~~~~~l~~ 184 (268)
T COG1718 114 WARKEFRNLKRAYEAGVRVPEPIAFR----NNVLVMEFIGDDGLPAPRLK-----DVPLELEEAEGLYEDVVEYMRRLYK 184 (268)
T ss_pred HHHHHHHHHHHHHHcCCCCCCceeec----CCeEEEEeccCCCCCCCCcc-----cCCcCchhHHHHHHHHHHHHHHHHH
Confidence 234555666653 33334444433 337999999643 1111121 1123333566667778888888776
Q ss_pred -cCCCcEEeeeecccCeeecCCCcceeccccccccc
Q 003605 528 -DSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSA 562 (808)
Q Consensus 528 -~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~ 562 (808)
.+ +||+||..-|||+. ++.+.|+|||-|...
T Consensus 185 ~a~---LVHgDLSEyNiL~~-~~~p~iID~~QaV~~ 216 (268)
T COG1718 185 EAG---LVHGDLSEYNILVH-DGEPYIIDVSQAVTI 216 (268)
T ss_pred hcC---cccccchhhheEEE-CCeEEEEECcccccc
Confidence 44 99999999999999 789999999988643
No 463
>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.93 E-value=3.3e-05 Score=78.88 Aligned_cols=103 Identities=24% Similarity=0.214 Sum_probs=81.3
Q ss_pred HHHHHHHhhccc-ccceeEEeeeeeccceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCC
Q 003605 453 LAEVEMLSRLHH-RNLVKLIGICIEEQARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSP 531 (808)
Q Consensus 453 ~~Ei~iL~~L~H-pNIV~L~g~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p 531 (808)
..|.-+++.+++ +++.+++|+|- .++|.||...+++...-.. -..-..-+|..|.+||.++++.+.+|++....
T Consensus 7 ~~E~lll~~l~~~~~~pk~lG~CG----~~~v~E~~~~~~~~~~~~~-l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~ 81 (188)
T PF12260_consen 7 NNEPLLLQLLQGSEPFPKLLGSCG----RFYVVEYVGAGSLYGIYRP-LSQFLQSPWEQRAKIALQLLELLEELDHGPLG 81 (188)
T ss_pred ccHHHHHHHcCCCCCCCCeeeECC----CEEEEEeecCccccccccc-cccccccCHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 357888888876 69999999993 3678999987766432100 00112478999999999999999999986544
Q ss_pred cEEeeeecccCeeecCCCcceeccccccc
Q 003605 532 RVIHRDFKSSNILLEHDFTPKVSDFGLAR 560 (808)
Q Consensus 532 ~IiHrDIKpsNILLd~~~~vKL~DFGLa~ 560 (808)
.+.-.|++++|+-+++++++|+.|...+.
T Consensus 82 ~~~lcDv~~~nfgv~~~~~lk~iDld~v~ 110 (188)
T PF12260_consen 82 FFYLCDVSPDNFGVNDDGRLKLIDLDDVF 110 (188)
T ss_pred cEEEeecchHHeEEeCCCcEEEEechhcc
Confidence 58899999999999999999999998764
No 464
>PRK10593 hypothetical protein; Provisional
Probab=97.85 E-value=0.00029 Score=77.01 Aligned_cols=79 Identities=15% Similarity=0.137 Sum_probs=59.0
Q ss_pred cceeeeeeecCcEEEEEEEeeCCCEEEEEEeecccchhhHHHHHHHHHHhhccc---ccceeEEeeeeec---cceEEEE
Q 003605 411 FDASRILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHH---RNLVKLIGICIEE---QARCLVY 484 (808)
Q Consensus 411 f~~~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~H---pNIV~L~g~~~~~---~~~~LV~ 484 (808)
....+-||.|..+.||+....++ .+++|..+.. .....|.+|.+.|+.|.- -.+.+++++|..+ +..+|||
T Consensus 16 ~~~~~~i~~G~~~~vy~~~~~~~-~~~~k~~~~~--~~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~LVm 92 (297)
T PRK10593 16 LSRVECISEQPYAALWALYDSQG-NPMPLMARSF--STPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVLLL 92 (297)
T ss_pred hheeeecCCccceeEEEEEcCCC-CEEEEEeccc--ccchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEEEE
Confidence 34456899999999999876655 4666775431 123588999999999953 3678889887543 5689999
Q ss_pred eecCCCCc
Q 003605 485 ELIPNGSV 492 (808)
Q Consensus 485 Ey~~~GsL 492 (808)
|+++++++
T Consensus 93 E~i~G~~~ 100 (297)
T PRK10593 93 ERLRGVSV 100 (297)
T ss_pred eccCCEec
Confidence 99998766
No 465
>PLN02876 acyl-CoA dehydrogenase
Probab=97.84 E-value=0.00015 Score=89.94 Aligned_cols=148 Identities=15% Similarity=0.239 Sum_probs=93.2
Q ss_pred eeeeeecCcEEEEEEEeeCC---CEEEEEEeeccc-chhhHHHHHHHHHHhhcc-cccc--eeEEeeeeec---cceEEE
Q 003605 414 SRILGEGGFGLVYSGVLDDG---TKVAVKVLKRVD-QQGGREFLAEVEMLSRLH-HRNL--VKLIGICIEE---QARCLV 483 (808)
Q Consensus 414 ~~~LG~G~fG~VYkg~l~dg---~~VAVK~lk~~~-~~~~~~f~~Ei~iL~~L~-HpNI--V~L~g~~~~~---~~~~LV 483 (808)
.+.|+.|.+..+|+....++ ..+++|+..... ......+.+|+++|+.+. |.++ .+++++|.+. +..++|
T Consensus 43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~~flV 122 (822)
T PLN02876 43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLLQSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGTAFYI 122 (822)
T ss_pred EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccCccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCCceEE
Confidence 56789999999999877654 367777754322 123457889999999995 6665 7888888764 467899
Q ss_pred EeecCCCCcccc-----------------------ccccccC-------CCCCCHHH--HHHH---------------HH
Q 003605 484 YELIPNGSVESH-----------------------LHGVDKE-------SAPLGWDA--RLKI---------------AL 516 (808)
Q Consensus 484 ~Ey~~~GsL~~~-----------------------L~~~~~~-------~~~L~~~~--~l~I---------------a~ 516 (808)
|||+++..+.+. ||..... +.+..+.. ...+ .-
T Consensus 123 ME~v~G~~~~~~~~~~~~~~~r~~l~~~l~~~La~LH~vd~~~~gl~~~g~~~~~~~~~l~~w~~~~~~~~~~~~~~~~~ 202 (822)
T PLN02876 123 MEYLEGRIFVDPKLPGVAPERRRAIYRATAKVLAALHSADVDAIGLGKYGRRDNYCKRQVERWAKQYLASTGEGKPPRNP 202 (822)
T ss_pred EEecCCcccCCccCCCCCHHHHHHHHHHHHHHHHHHhCCCchhcChhhcCCCCchHHHHHHHHHHHHHHhhcccCCCCCh
Confidence 999987654321 2221111 01111111 1111 01
Q ss_pred HHHHHHHHHHhcCC--------CcEEeeeecccCeeecCC-Cc-ceecccccccc
Q 003605 517 GAARALAYLHEDSS--------PRVIHRDFKSSNILLEHD-FT-PKVSDFGLARS 561 (808)
Q Consensus 517 qia~gL~yLH~~~~--------p~IiHrDIKpsNILLd~~-~~-vKL~DFGLa~~ 561 (808)
.+.+.+++|..+-. +.+||+|+++.|||++.+ .+ +-|.||+++..
T Consensus 203 ~~~~l~~wL~~~~P~~~~~~~~~~LvHGD~~~~Nvl~~~~~~~v~aVLDWE~a~~ 257 (822)
T PLN02876 203 KMLELIDWLRENIPAEDSTGAGTGIVHGDFRIDNLVFHPTEDRVIGILDWELSTL 257 (822)
T ss_pred hHHHHHHHHHhcCCCccccCCCcceEecCcccccEEEcCCCCeEEEEEeeecccc
Confidence 23345677754321 349999999999999853 33 57899998753
No 466
>PF10707 YrbL-PhoP_reg: PhoP regulatory network protein YrbL; InterPro: IPR019647 This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner [].
Probab=97.73 E-value=0.00023 Score=73.36 Aligned_cols=128 Identities=21% Similarity=0.301 Sum_probs=91.1
Q ss_pred eeeeeecCcEEEEEEEeeCCCEEEEEEeeccc----------------chhhHHHHHHHHHHhhcc------cccceeEE
Q 003605 414 SRILGEGGFGLVYSGVLDDGTKVAVKVLKRVD----------------QQGGREFLAEVEMLSRLH------HRNLVKLI 471 (808)
Q Consensus 414 ~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~----------------~~~~~~f~~Ei~iL~~L~------HpNIV~L~ 471 (808)
...||+|+.=.||. +.+.....||+.+... ....+++.+|+.....+. +.+|.+++
T Consensus 6 ~~~i~~G~~R~cy~--HP~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~ 83 (199)
T PF10707_consen 6 SDLIAQGGERDCYQ--HPDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFY 83 (199)
T ss_pred CcccccCCCceEEE--CCCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEe
Confidence 46899999999994 5556678889886543 223567788888777776 78899999
Q ss_pred eeeeeccceEEEEeecCC--C----CccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeee
Q 003605 472 GICIEEQARCLVYELIPN--G----SVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILL 545 (808)
Q Consensus 472 g~~~~~~~~~LV~Ey~~~--G----sL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILL 545 (808)
|+..+....-+|+|.+.+ | +|.+++. ...++. +..+. +-+-..||-+++ |+.+|++|.||++
T Consensus 84 G~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~-----~~~~~~-~~~~~---L~~f~~~l~~~~---Iv~~dl~~~NIv~ 151 (199)
T PF10707_consen 84 GFVETNLGLGLVVELIRDADGNISPTLEDYLK-----EGGLTE-ELRQA---LDEFKRYLLDHH---IVIRDLNPHNIVV 151 (199)
T ss_pred EEEecCCceEEEEEEEECCCCCcCccHHHHHH-----cCCccH-HHHHH---HHHHHHHHHHcC---CeecCCCcccEEE
Confidence 999999899999998753 3 4566663 123444 33333 334456777776 9999999999999
Q ss_pred cCC---C-cceecc
Q 003605 546 EHD---F-TPKVSD 555 (808)
Q Consensus 546 d~~---~-~vKL~D 555 (808)
..+ . .+.|+|
T Consensus 152 ~~~~~~~~~lvlID 165 (199)
T PF10707_consen 152 QRRDSGEFRLVLID 165 (199)
T ss_pred EecCCCceEEEEEe
Confidence 543 2 455655
No 467
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.68 E-value=0.00022 Score=74.78 Aligned_cols=141 Identities=23% Similarity=0.284 Sum_probs=79.1
Q ss_pred eeeeecCcE-EEEEEEeeCCCEEEEEEeecccchhhHHHHHHHHHHhhcccc---cceeEEeeeeec---cceEEEEeec
Q 003605 415 RILGEGGFG-LVYSGVLDDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHR---NLVKLIGICIEE---QARCLVYELI 487 (808)
Q Consensus 415 ~~LG~G~fG-~VYkg~l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~Hp---NIV~L~g~~~~~---~~~~LV~Ey~ 487 (808)
+.|+.|+.. .||+. +..+++|..+.. ....++.+|.++|..+... .+.+.++..... +..+++|+++
T Consensus 3 ~~~~~gG~~n~vy~~----~~~~VlR~~~~~--~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~l~~~i 76 (235)
T cd05155 3 EPVDSGGTDNATFRL----GDDMSVRLPSAA--GYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWSVYRWL 76 (235)
T ss_pred eeccCCCcccceEEc----CCceEEEcCCcc--chHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceEEEEee
Confidence 457777766 58875 235677765532 2345788999999988532 344455444332 2348899999
Q ss_pred CCCCcccc------------------ccccccCCCC------------C-CHHHHH--HHH-------HHHHHH-HHH-H
Q 003605 488 PNGSVESH------------------LHGVDKESAP------------L-GWDARL--KIA-------LGAARA-LAY-L 525 (808)
Q Consensus 488 ~~GsL~~~------------------L~~~~~~~~~------------L-~~~~~l--~Ia-------~qia~g-L~y-L 525 (808)
+|.++.+. ||........ + .|.... .+. .+.+.. ++. +
T Consensus 77 ~G~~l~~~~~~~~~~l~~~la~~l~~LH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 156 (235)
T cd05155 77 EGETATAAALSDPSEFAEDLADFLAALRQIDPSGGPPAGRHNFLRGGDLAVRDAETREAIEALEGVIDVDAARALWEAAL 156 (235)
T ss_pred cCCCCCccccCCHHHHHHHHHHHHHHHhCCCcccCCccCCccccCCCChhHhhHHHHHHHHHcccccChHHHHHHHHHHh
Confidence 98777543 2221111100 0 122111 010 011111 111 1
Q ss_pred Hh--cCCCcEEeeeecccCeeecCCCcceecccccccc
Q 003605 526 HE--DSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARS 561 (808)
Q Consensus 526 H~--~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~ 561 (808)
+. ...+.++|+|+.+.|||++++...-|.||+.+..
T Consensus 157 ~~~~~~~~~l~HGD~~~~Nvlv~~~~i~giIDw~~a~~ 194 (235)
T cd05155 157 RAPWWGPPVWFHGDLAPGNLLVQDGRLSAVIDFGCLGV 194 (235)
T ss_pred cccccCCceEEeCCCCCCcEEEECCCEEEEEeCcccCc
Confidence 11 1234599999999999998775567999998753
No 468
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.55 E-value=0.0005 Score=71.72 Aligned_cols=142 Identities=20% Similarity=0.218 Sum_probs=82.8
Q ss_pred eeeeeecCcEEEEEEEeeC--CCEEEEEEeecccchhhHHHHHHHHHHhhcccccc-eeEEeeeeeccceEEEEeecCCC
Q 003605 414 SRILGEGGFGLVYSGVLDD--GTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNL-VKLIGICIEEQARCLVYELIPNG 490 (808)
Q Consensus 414 ~~~LG~G~fG~VYkg~l~d--g~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNI-V~L~g~~~~~~~~~LV~Ey~~~G 490 (808)
.+.|..|-...+|+....+ +..|++|+....... .-+..+|+.++..+...++ .++++.+. ..+||||+++.
T Consensus 3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~-~~d~~~E~~~~~~l~~~gl~P~v~~~~~----~~~l~e~i~G~ 77 (235)
T cd05157 3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTEL-IIDRERELRIHKLLSKHGLAPKLYATFQ----NGLIYEFIPGR 77 (235)
T ss_pred EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccc-eecHHHHHHHHHHHHhCCCCCeEEEEeC----CcEEEEeeCCC
Confidence 3567788889999988764 678889976543221 1233478889998864444 44444332 24899999987
Q ss_pred Ccccc-----------------ccccccCC-------CCC-CHHHHHHHHH----------------------HHHHHHH
Q 003605 491 SVESH-----------------LHGVDKES-------APL-GWDARLKIAL----------------------GAARALA 523 (808)
Q Consensus 491 sL~~~-----------------L~~~~~~~-------~~L-~~~~~l~Ia~----------------------qia~gL~ 523 (808)
++... +|...... ... -|..+..+.. .+.+.+.
T Consensus 78 ~l~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 157 (235)
T cd05157 78 TLEPEDLRNPKIYRLIARELAKLHSIKPPEAISSPGTPKPILWPTIRKWINLVPTEFKKPEKFQKKTKAISFEQLRDEIS 157 (235)
T ss_pred cCCHHHccChHHHHHHHHHHHHHhcccccccccccCCCCCcHHHHHHHHHHHhHHhhccccchhhhhccccHHHHHHHHH
Confidence 76422 12111110 011 1222111111 1111112
Q ss_pred HH----Hhc-CCCcEEeeeecccCeeecC-CCcceeccccccc
Q 003605 524 YL----HED-SSPRVIHRDFKSSNILLEH-DFTPKVSDFGLAR 560 (808)
Q Consensus 524 yL----H~~-~~p~IiHrDIKpsNILLd~-~~~vKL~DFGLa~ 560 (808)
.| ... ....++|+|+.+.|||++. +..+.|.||..|.
T Consensus 158 ~l~~~l~~~~~~~~l~H~Dl~~~Nil~~~~~~~~~lIDwe~a~ 200 (235)
T cd05157 158 WLKELLSALNSPIVFCHNDLLSGNIIYNEEKNSVKFIDYEYAG 200 (235)
T ss_pred HHHHHhcccCCCEEEEcCCCCcCcEEEeCCCCCEEEEEcccCC
Confidence 22 211 2345999999999999998 5789999998775
No 469
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.50 E-value=0.00064 Score=72.21 Aligned_cols=139 Identities=19% Similarity=0.144 Sum_probs=81.4
Q ss_pred eeecCcEEEEEEEeeCCCEEEEEEeecccchhhHHHHHHHHHHhhcccccc-eeEEeeeeeccceEEEEeecCCCCcccc
Q 003605 417 LGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNL-VKLIGICIEEQARCLVYELIPNGSVESH 495 (808)
Q Consensus 417 LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNI-V~L~g~~~~~~~~~LV~Ey~~~GsL~~~ 495 (808)
+..|-.+.+|+... ++..+++|+.........-+..+|.++++.+....+ .++++.+. ..+||||+++..+...
T Consensus 4 ~~~G~tn~~y~~~~-~~~~~vlR~~~~~~~~~~~~r~~E~~~l~~l~~~g~~P~~i~~~~----~~~v~e~i~G~~~~~~ 78 (256)
T TIGR02721 4 LSGGLTNRSWRIEH-PGISFVWRPQSPVCKALGVDRQREYQILQALSALGLAPKPILVNE----HWLLVEWLEGEVITLD 78 (256)
T ss_pred CCCcCcCCeEEEEe-CCccEEEeeCCcccccccCcHHHHHHHHHHHHhcCCCCceEEEeC----CEEEEEeccCcccccc
Confidence 45677788998874 467888887654322211245789999999865444 34444432 3689999998776532
Q ss_pred -----------------ccccccCCCCCCHHHHH-HHH---------HHHHHHHHHHHhc-----CCCcEEeeeecccCe
Q 003605 496 -----------------LHGVDKESAPLGWDARL-KIA---------LGAARALAYLHED-----SSPRVIHRDFKSSNI 543 (808)
Q Consensus 496 -----------------L~~~~~~~~~L~~~~~l-~Ia---------~qia~gL~yLH~~-----~~p~IiHrDIKpsNI 543 (808)
||........++...++ ... ..+.+.+..+-.. ..+.++|+|+.+.||
T Consensus 79 ~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl~~~Ni 158 (256)
T TIGR02721 79 QFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDVHAYNL 158 (256)
T ss_pred cccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCCCcCcE
Confidence 23222112223322211 111 0111222222221 123589999999999
Q ss_pred eecCCCcceecccccccc
Q 003605 544 LLEHDFTPKVSDFGLARS 561 (808)
Q Consensus 544 LLd~~~~vKL~DFGLa~~ 561 (808)
++++++ +.|.||+.+..
T Consensus 159 l~~~~~-~~lIDwE~a~~ 175 (256)
T TIGR02721 159 VVTPQG-LKLIDWEYASD 175 (256)
T ss_pred EEeCCC-CEEEeccccCc
Confidence 999876 78999998753
No 470
>PF13095 FTA2: Kinetochore Sim4 complex subunit FTA2
Probab=97.47 E-value=0.0011 Score=68.39 Aligned_cols=125 Identities=26% Similarity=0.421 Sum_probs=89.2
Q ss_pred CCcceeeeeeecCc-EEEEEEEeeCCCEEEEEEeecc------------cc---------hhhHHHHHHHHHHhhcc---
Q 003605 409 GNFDASRILGEGGF-GLVYSGVLDDGTKVAVKVLKRV------------DQ---------QGGREFLAEVEMLSRLH--- 463 (808)
Q Consensus 409 ~~f~~~~~LG~G~f-G~VYkg~l~dg~~VAVK~lk~~------------~~---------~~~~~f~~Ei~iL~~L~--- 463 (808)
.+|+..+.||.|.- |.|||+.+. |+.+|+|.++.. .. ....-|..|.+..++|+
T Consensus 37 ~~I~flefLg~g~~~~~V~kv~I~-g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~~ 115 (207)
T PF13095_consen 37 DDIEFLEFLGHGSHDGYVFKVEID-GRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEAG 115 (207)
T ss_pred CcEeeeeecCCCCceeEEEEEEEC-CeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhcc
Confidence 78889999999999 999999986 789999994320 00 11235888999999985
Q ss_pred cccc--eeEEeeeeec-c-----------------ceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHH
Q 003605 464 HRNL--VKLIGICIEE-Q-----------------ARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALA 523 (808)
Q Consensus 464 HpNI--V~L~g~~~~~-~-----------------~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~ 523 (808)
+.++ |+.+||..-. + ...+|.||++... .+. .+-+.++.+-|.
T Consensus 116 ~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~-------------~~~----~~~~~~~~~dl~ 178 (207)
T PF13095_consen 116 REGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP-------------PLQ----IRDIPQMLRDLK 178 (207)
T ss_pred ccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc-------------ccc----hhHHHHHHHHHH
Confidence 4466 8999997322 1 1245666654322 122 223445667788
Q ss_pred HHHhcCCCcEEeeeecccCeeecCCCcceecccccc
Q 003605 524 YLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLA 559 (808)
Q Consensus 524 yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa 559 (808)
.+|..+ |+-+|+++.|.. .-||+|||.+
T Consensus 179 ~~~k~g---I~~~Dv~~~ny~-----~G~lvDfs~~ 206 (207)
T PF13095_consen 179 ILHKLG---IVPRDVKPRNYR-----GGKLVDFSSS 206 (207)
T ss_pred HHHHCC---eeeccCcccccc-----CCEEEecccC
Confidence 899998 999999999975 5689999864
No 471
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.43 E-value=0.00057 Score=73.94 Aligned_cols=143 Identities=20% Similarity=0.166 Sum_probs=88.1
Q ss_pred eeeeeecCcEEEEEEEeeCCCEEEEEEeecccchhhHHHHHHHHHHhhccccc--ceeEEeee------eeccceEEEEe
Q 003605 414 SRILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRN--LVKLIGIC------IEEQARCLVYE 485 (808)
Q Consensus 414 ~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpN--IV~L~g~~------~~~~~~~LV~E 485 (808)
.+.|..|....+|+...++ ..+++|+... ....+...|++++..|++.+ +.+++... ...+..++|++
T Consensus 19 i~~i~~G~~n~~y~v~~~~-~~~vLr~~~~---~~~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~~~l~~ 94 (296)
T cd05153 19 FEGISAGIENTNYFVTTDS-GRYVLTLFEK---VSAEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKPAALVE 94 (296)
T ss_pred eecccCccccceEEEEeCC-CcEEEEEcCC---CChHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCceEEEEE
Confidence 4567778778999987654 4688888764 23356777888888886443 44544321 22345689999
Q ss_pred ecCCCCcccc--------------cccccc-------CCCCCCHHHHHH----------HHHHHHHHHHHHHhc----CC
Q 003605 486 LIPNGSVESH--------------LHGVDK-------ESAPLGWDARLK----------IALGAARALAYLHED----SS 530 (808)
Q Consensus 486 y~~~GsL~~~--------------L~~~~~-------~~~~L~~~~~l~----------Ia~qia~gL~yLH~~----~~ 530 (808)
|++|..+... ||.... ......|..... ....+..++.++.+. ..
T Consensus 95 ~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~ 174 (296)
T cd05153 95 FLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFDPSDLP 174 (296)
T ss_pred eCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhhhhcCC
Confidence 9988776431 111100 011223432211 112234455555541 12
Q ss_pred CcEEeeeecccCeeecCCCcceeccccccc
Q 003605 531 PRVIHRDFKSSNILLEHDFTPKVSDFGLAR 560 (808)
Q Consensus 531 p~IiHrDIKpsNILLd~~~~vKL~DFGLa~ 560 (808)
..++|+|+.+.|||++++..+.|.||+.+.
T Consensus 175 ~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~ 204 (296)
T cd05153 175 RGVIHADLFRDNVLFDGDELSGVIDFYFAC 204 (296)
T ss_pred CcCCccCcCcccEEEeCCceEEEeehhhhc
Confidence 359999999999999998777899999875
No 472
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=97.39 E-value=0.00053 Score=69.05 Aligned_cols=127 Identities=20% Similarity=0.203 Sum_probs=86.1
Q ss_pred eeeeeeecCcEEEEEEEeeCCCEEEEEEeecccchhhHHHHHHHHHHhhccccccee-EEeeeeeccceEEEEeecCCCC
Q 003605 413 ASRILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLVK-LIGICIEEQARCLVYELIPNGS 491 (808)
Q Consensus 413 ~~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV~-L~g~~~~~~~~~LV~Ey~~~Gs 491 (808)
..+.|++|.+|.||+|.+. |..+|+|+-+.. .....+..|+++|..++--++-. ++.|- ...+.|||+.+-.
T Consensus 26 v~~~L~KG~~s~Vyl~~~~-~~~~a~Kvrr~d--s~r~~l~kEakiLeil~g~~~~p~vy~yg----~~~i~me~i~G~~ 98 (201)
T COG2112 26 VEKELAKGTTSVVYLGEWR-GGEVALKVRRRD--SPRRNLEKEAKILEILAGEGVTPEVYFYG----EDFIRMEYIDGRP 98 (201)
T ss_pred hhhhhhcccccEEEEeecc-CceEEEEEecCC--cchhhHHHHHHHHHHhhhcCCCceEEEec----hhhhhhhhhcCcc
Confidence 4568999999999999987 568898886643 34578899999999998766644 44432 3345699998878
Q ss_pred ccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeec-ccCeeecCCCcceeccccccc
Q 003605 492 VESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFK-SSNILLEHDFTPKVSDFGLAR 560 (808)
Q Consensus 492 L~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIK-psNILLd~~~~vKL~DFGLa~ 560 (808)
|.++-.+ .+-.+.+. +++.---|-..+ |-|+.|. +..++|-.+.++.|+||.-|.
T Consensus 99 L~~~~~~-------~~rk~l~~----vlE~a~~LD~~G---I~H~El~~~~k~vlv~~~~~~iIDFd~At 154 (201)
T COG2112 99 LGKLEIG-------GDRKHLLR----VLEKAYKLDRLG---IEHGELSRPWKNVLVNDRDVYIIDFDSAT 154 (201)
T ss_pred hhhhhhc-------ccHHHHHH----HHHHHHHHHHhc---cchhhhcCCceeEEecCCcEEEEEccchh
Confidence 7766532 12223333 333323344445 8888886 444444444599999999886
No 473
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.24 E-value=0.0021 Score=73.13 Aligned_cols=76 Identities=21% Similarity=0.200 Sum_probs=54.8
Q ss_pred eeeeeecCcEEEEEEEeeCC-CEEEEEEeecc-----c--chhhHHHHHHHHHHhhcc-c--ccceeEEeeeeeccceEE
Q 003605 414 SRILGEGGFGLVYSGVLDDG-TKVAVKVLKRV-----D--QQGGREFLAEVEMLSRLH-H--RNLVKLIGICIEEQARCL 482 (808)
Q Consensus 414 ~~~LG~G~fG~VYkg~l~dg-~~VAVK~lk~~-----~--~~~~~~f~~Ei~iL~~L~-H--pNIV~L~g~~~~~~~~~L 482 (808)
.+.||.|.+..||++...+| +.|+||.-... . ....+++..|.+.|..+. + .++.+++.+ +.+..++
T Consensus 31 ~~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~--D~~~~~l 108 (401)
T PRK09550 31 AREIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHY--DEELAVT 108 (401)
T ss_pred eeEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEE--CCCCCEE
Confidence 35789999999999998877 48999984311 1 224567788888888873 2 456677766 3356789
Q ss_pred EEeecCCCC
Q 003605 483 VYELIPNGS 491 (808)
Q Consensus 483 V~Ey~~~Gs 491 (808)
||||+++..
T Consensus 109 VME~L~~~~ 117 (401)
T PRK09550 109 VMEDLSDHK 117 (401)
T ss_pred EEecCCCcc
Confidence 999998643
No 474
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.23 E-value=0.003 Score=69.09 Aligned_cols=159 Identities=20% Similarity=0.232 Sum_probs=91.4
Q ss_pred CCHHHHHHHhCCcce-----eeeeeecCcEEEEEEEeeCCCEEEEEEeecccchhhHHHHHHHHHHhhccccc--ceeEE
Q 003605 399 FSASEIEKATGNFDA-----SRILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRN--LVKLI 471 (808)
Q Consensus 399 fs~~el~~at~~f~~-----~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpN--IV~L~ 471 (808)
.+.++|...-+.|.+ .+.++.|....+|+...++| .+++|+.+... ..++...|++++..|...+ +.+++
T Consensus 7 ~~~~~l~~~l~~y~~~~~~~i~~~~~G~~n~~y~v~t~~~-~~vLK~~~~~~--~~~~i~~e~~~l~~L~~~g~pvp~~i 83 (307)
T TIGR00938 7 VSDEEMSSFLDGYDLGELLSLKGIAEGVENSNYLLTTDVG-RYILTLYEKRV--KAEELPFFLALTTHLAARGLPVPKPV 83 (307)
T ss_pred CCHHHHHHHHHhcCCCCceeccccCCccccceEEEEeCCC-cEEEEEecCCC--CHHHHHHHHHHHHHHHHCCCCCCccc
Confidence 344555555445544 34566676789998876555 57788765421 2345566778888875333 34444
Q ss_pred eee------eeccceEEEEeecCCCCcccc--------------cccccc----CC----CCCCHHHHHH----------
Q 003605 472 GIC------IEEQARCLVYELIPNGSVESH--------------LHGVDK----ES----APLGWDARLK---------- 513 (808)
Q Consensus 472 g~~------~~~~~~~LV~Ey~~~GsL~~~--------------L~~~~~----~~----~~L~~~~~l~---------- 513 (808)
... ...+..++++||++|..+... +|.... .. ..-.|.....
T Consensus 84 ~t~~g~~~~~~~g~~~~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~ 163 (307)
T TIGR00938 84 KSRDGRQLSTLAGKPACLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLE 163 (307)
T ss_pred cCCCCCeehhcCCeEEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccC
Confidence 422 123456899999988654321 121100 00 0112321110
Q ss_pred --HHHHHHHHHHHHHh----cCCCcEEeeeecccCeeecCCCcceeccccccc
Q 003605 514 --IALGAARALAYLHE----DSSPRVIHRDFKSSNILLEHDFTPKVSDFGLAR 560 (808)
Q Consensus 514 --Ia~qia~gL~yLH~----~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~ 560 (808)
....+.+.+++|.. .....++|+|+++.||+++.+....|.||+.+.
T Consensus 164 ~~~~~~l~~~~~~l~~~~~~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~ 216 (307)
T TIGR00938 164 AHMGAELDKELDYLDKFWPRDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFAC 216 (307)
T ss_pred HHHHHHHHHHHHHHHhhhhhcCCCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence 11123345555543 123469999999999999988767899999874
No 475
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=97.05 E-value=0.0015 Score=80.86 Aligned_cols=196 Identities=19% Similarity=0.190 Sum_probs=132.9
Q ss_pred HHHHHHHHhhcccccceeEEeeeeeccce----EEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHh
Q 003605 452 FLAEVEMLSRLHHRNLVKLIGICIEEQAR----CLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHE 527 (808)
Q Consensus 452 f~~Ei~iL~~L~HpNIV~L~g~~~~~~~~----~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~ 527 (808)
..-|++.+.++.|.|++.++.|-.++... .+..|++..-++.+.+. ....++..+.+.+..++.+||+|+|+
T Consensus 229 ~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v~~~~~s~~~~~~~~q----~v~~i~~~~~r~~~~~~~~GL~~~h~ 304 (1351)
T KOG1035|consen 229 TEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDVLQEICSKVELRSLLQ----SVGSIPLETLRILHQKLLEGLAYLHS 304 (1351)
T ss_pred HHHHHHHHHhhccccccceeEEeehhhcchHHHHHHHhhcCccchHHHHh----hccccCHHHHHHHHHHHhhhHHHHHH
Confidence 34466677788999999999997665433 23447777777777764 33467788888899999999999999
Q ss_pred cCCCcEEeeeeccc---CeeecCCCcceec--ccccccccccccccccccccccccccccchhhhcCCCc--cccceeeH
Q 003605 528 DSSPRVIHRDFKSS---NILLEHDFTPKVS--DFGLARSAMDEESRHISTRVMGTFGYVAPEYAMTGHLL--VKSDVYSY 600 (808)
Q Consensus 528 ~~~p~IiHrDIKps---NILLd~~~~vKL~--DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~~~~~s--~kSDVwSf 600 (808)
.. +.|.-+..+ +--.+.++...++ ||+..+...+..... ...-+..|.++|......+. .+.|+|.+
T Consensus 305 ~~---l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~---~~~~~~~~~~~e~~~~~~~~~~r~~dL~~l 378 (1351)
T KOG1035|consen 305 LS---LEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSF---SDLLAEIRNADEDLKENTAKKSRLTDLWCL 378 (1351)
T ss_pred hc---cceeEEecccccccccCccceeecchhhhcccccCCCcccch---hhcCccccccccccccccchhhhhhHHHHH
Confidence 86 777777666 5555666777776 998887654332211 12234567788877655544 34799999
Q ss_pred HHHHHHHHhCCCCCCCCCCCCcchhHHhhhhhcccccccccccCCCCCCCCChhhHHHHHHHHHHccccCCCCCCCHHHH
Q 003605 601 GVVILELLSGRKPVDMTQPPGQENLVAWARPLLTSREGLERIIDPSLGNDVPFDSVAKVAAIASMCVQPEVQHRPFMGEV 680 (808)
Q Consensus 601 GvvLlELlTG~~P~~~~~~~~~~~lv~w~~~~~~~~~~l~~ivD~~l~~~~~~~~~~~l~~Li~~Cl~~dP~~RPsm~eV 680 (808)
|..+..+..|...-.... ....+.+.. ....+.+....|+..+.++|++..++
T Consensus 379 gll~~~~~~~~~i~~~~~-------------------~~~~~l~~~--------~~~~~~d~~~~~~~~~~~~Rl~~~~l 431 (1351)
T KOG1035|consen 379 GLLLLQLSQGEDISEKSA-------------------VPVSLLDVL--------STSELLDALPKCLDEDSEERLSALEL 431 (1351)
T ss_pred HHHHhhhhhcCccccccc-------------------chhhhhccc--------cchhhhhhhhhhcchhhhhccchhhh
Confidence 999999998765432111 011111110 11146677888999999999999998
Q ss_pred HHHH
Q 003605 681 VQAL 684 (808)
Q Consensus 681 l~~L 684 (808)
+...
T Consensus 432 l~~~ 435 (1351)
T KOG1035|consen 432 LTHP 435 (1351)
T ss_pred hhch
Confidence 7754
No 476
>PRK05231 homoserine kinase; Provisional
Probab=97.04 E-value=0.0048 Score=67.63 Aligned_cols=158 Identities=17% Similarity=0.194 Sum_probs=86.6
Q ss_pred CCHHHHHHHhCCcce-----eeeeeecCcEEEEEEEeeCCCEEEEEEeecccchhhHHHHHHHHHHhhccccc--ceeEE
Q 003605 399 FSASEIEKATGNFDA-----SRILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRN--LVKLI 471 (808)
Q Consensus 399 fs~~el~~at~~f~~-----~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpN--IV~L~ 471 (808)
.+.+++...-..|.+ .+.|+.|....+|+...++| .+++|+.... ..++...|++++..|...+ +.+.+
T Consensus 7 ls~~~l~~~l~~y~~~~~~~~~~l~~G~~n~~y~v~t~~g-~~vLK~~~~~---~~~~l~~~~~~l~~L~~~glpvP~~i 82 (319)
T PRK05231 7 VSDDELAAFLAPYDLGELLSLKGIAEGIENSNFFLTTTQG-EYVLTLFERL---TAEDLPFFLGLMQHLAARGVPVPAPV 82 (319)
T ss_pred CCHHHHHHHHHhcCCchhhccchhccccccceEEEEeCCC-cEEEEEeccC---ChHHhHHHHHHHHHHHHCCCCCCcce
Confidence 455556555455544 34566777788999877655 6888887521 2234445666776664322 33333
Q ss_pred ee------eeeccceEEEEeecCCCCcccc--------------cccccc-------CCCCCCH-HHHHHH---------
Q 003605 472 GI------CIEEQARCLVYELIPNGSVESH--------------LHGVDK-------ESAPLGW-DARLKI--------- 514 (808)
Q Consensus 472 g~------~~~~~~~~LV~Ey~~~GsL~~~--------------L~~~~~-------~~~~L~~-~~~l~I--------- 514 (808)
.. ....+..++++||++|..+... +|.... ....+.| .....-
T Consensus 83 ~~~~G~~~~~~~g~~~~l~~~l~G~~~~~~~~~~~~~~G~~LA~lH~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (319)
T PRK05231 83 ARRDGAALGELAGKPAAIVTFLEGKWPRAPTAAHCAEVGEMLARMHLAGRDFPLERPNLRGLAWWRELAPRLLPFLADEQ 162 (319)
T ss_pred eCCCCCEeeeeCCEEEEEEEecCCCCCCCCCHHHHHHHHHHHHHHHhhhhcCCccCCCCCChHHHHHHHHHHhhccChhH
Confidence 21 1224557899999988754321 121110 0011222 221111
Q ss_pred ---H-HHHHHHHHHHHhc----CCCcEEeeeecccCeeecCCCcceeccccccc
Q 003605 515 ---A-LGAARALAYLHED----SSPRVIHRDFKSSNILLEHDFTPKVSDFGLAR 560 (808)
Q Consensus 515 ---a-~qia~gL~yLH~~----~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~ 560 (808)
. ..+...++.+... -...+||+|+.+.|||++.+...-|.||+.+.
T Consensus 163 ~~~l~~~~~~~~~~~~~~~~~~lp~~liHgD~~~~Nil~~~~~~~~iIDf~~~~ 216 (319)
T PRK05231 163 AALLEAELAAQLAFLASAAWPALPRGVIHADLFRDNVLFEGDRLSGFIDFYFAC 216 (319)
T ss_pred HHHHHHHHHHHHHhhhccccccCCcccCCCCCCCCcEEEECCceEEEEeccccc
Confidence 1 1111222333211 12359999999999999976556899999875
No 477
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.03 E-value=0.0045 Score=67.33 Aligned_cols=141 Identities=28% Similarity=0.322 Sum_probs=85.2
Q ss_pred eeeeecCcEEEEEEEeeC-------CCEEEEEEeecccchhhHHHHHHHHHHhhcccccc-eeEEeeeeeccceEEEEee
Q 003605 415 RILGEGGFGLVYSGVLDD-------GTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNL-VKLIGICIEEQARCLVYEL 486 (808)
Q Consensus 415 ~~LG~G~fG~VYkg~l~d-------g~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNI-V~L~g~~~~~~~~~LV~Ey 486 (808)
+.|..|-...+|+....+ ++.+++|+..... ....+..+|.+++..+...++ .++++++.. .+|+||
T Consensus 4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~-~~~~~r~~E~~~~~~l~~~g~~P~~~~~~~~----~~v~e~ 78 (302)
T cd05156 4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSV-ELLIDRERELVVFARLSERNLGPKLYGIFPN----GRIEEF 78 (302)
T ss_pred EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCC-cceechHHHHHHHHHHHhCCCCCceEEEeCC----Cchhhe
Confidence 456667777999988765 4788899876432 223456788889988864444 355555432 368999
Q ss_pred cCCCCcccc-----------------ccccccCC-------CCCCHHHHHH--------------------------HHH
Q 003605 487 IPNGSVESH-----------------LHGVDKES-------APLGWDARLK--------------------------IAL 516 (808)
Q Consensus 487 ~~~GsL~~~-----------------L~~~~~~~-------~~L~~~~~l~--------------------------Ia~ 516 (808)
++|..+... ||...... ...-|..+.+ +..
T Consensus 79 i~G~~l~~~~~~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (302)
T cd05156 79 IPSRTLTTEELRDPDISAEIARRMAKLHSIVVPLSPEERDLTPAIWKLLKQWLDLAETVIEIVDSDSEKLLEVELSLFLE 158 (302)
T ss_pred eCCCcCCHhHcCCcHHHHHHHHHHHHhhCCCCCCCCCcCcccchHHHHHHHHHHHhhhhhhhcccchhhhhhhhHHHHHH
Confidence 988776531 12211110 0111211111 111
Q ss_pred HHHHHHHHHHh------cCCCcEEeeeecccCeeecCC----Ccceeccccccc
Q 003605 517 GAARALAYLHE------DSSPRVIHRDFKSSNILLEHD----FTPKVSDFGLAR 560 (808)
Q Consensus 517 qia~gL~yLH~------~~~p~IiHrDIKpsNILLd~~----~~vKL~DFGLa~ 560 (808)
.+.+.+.+|.. .....++|+|+.+.|||++++ +.++|+||..|.
T Consensus 159 ~~~~~~~~l~~~~~~~~~~~~~lcH~Dl~~~Nil~~~~~~~~~~i~lIDwEya~ 212 (302)
T cd05156 159 DEAKYLRFLLESTSEESGSPVVFCHNDLQEGNILLLNPSSETKKLVLIDFEYAS 212 (302)
T ss_pred HHHHHHHHHHhhccCCCCCCceEEecCCCcCeEEecCCCCCCCcEEEEeeCCCC
Confidence 22233444432 134568999999999999885 789999999875
No 478
>PF03881 Fructosamin_kin: Fructosamine kinase; InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=96.78 E-value=0.0099 Score=64.88 Aligned_cols=144 Identities=25% Similarity=0.297 Sum_probs=75.3
Q ss_pred cceeeeeeecCcEEEEEEEeeCCCEEEEEEeecccchhhHHHHHHHHHHhhcc---cccceeEEeeeeeccceEEEEeec
Q 003605 411 FDASRILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLH---HRNLVKLIGICIEEQARCLVYELI 487 (808)
Q Consensus 411 f~~~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~---HpNIV~L~g~~~~~~~~~LV~Ey~ 487 (808)
....+.++.|....+|+.. .+++.+.||.-. ......|..|.+-|+.|. --.+.+.+++....+..+||+||+
T Consensus 19 i~~~~~v~GG~i~~a~~~~-~~~~~~FvK~~~---~~~~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLlle~l 94 (288)
T PF03881_consen 19 ITSIEPVSGGDINEAYRLD-TDGGSYFVKVNS---ESGRDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLLEFL 94 (288)
T ss_dssp --EEEEE--SSSSEEEEEE-TTS-EEEEEEEE---GGGCCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEEE--
T ss_pred eeeeEecCCCChhheEEEE-CCCccEEEEecC---hhhHHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEEEee
Confidence 3445678889999999877 567889999876 334467889999999884 345778888877777779999999
Q ss_pred CCC--Cccc---------cccc-ccc-----------------CCCCCCHHH-----HHHHHHHHHH-----------HH
Q 003605 488 PNG--SVES---------HLHG-VDK-----------------ESAPLGWDA-----RLKIALGAAR-----------AL 522 (808)
Q Consensus 488 ~~G--sL~~---------~L~~-~~~-----------------~~~~L~~~~-----~l~Ia~qia~-----------gL 522 (808)
+.+ +..+ .||. ... ....-+|.+ |+.-..+.+. .+
T Consensus 95 ~~~~~~~~~~~~lg~~LA~LH~~~~~~~FGf~~~~~~G~~~q~N~w~~~W~~Ff~~~RL~~~l~~~~~~~~~~~~~~~l~ 174 (288)
T PF03881_consen 95 EMGSPSPPDWEELGRQLAALHQWSPAGKFGFPVDTYIGSLPQPNTWTDSWEEFFAEQRLRPQLELAREKGGLDAELERLV 174 (288)
T ss_dssp ------CCHHHHHHHHHHHHHH-T--SSBB-SS-EEETTEEE----BS-HHHHHHHHCCHHHHHHHHHCTSS-CHHHHHH
T ss_pred cCCCCCchhHHHHHHHHHHHhhhcCCCCcCCCcCCcccCcCCCCCCCCCHHHHHHHHHHHHHHHHHHhhCCchhHHHHHH
Confidence 876 1111 1232 110 001123432 1111111111 11
Q ss_pred HH----HHhc-CCCcEEeeeecccCeeecCCCcceeccccc
Q 003605 523 AY----LHED-SSPRVIHRDFKSSNILLEHDFTPKVSDFGL 558 (808)
Q Consensus 523 ~y----LH~~-~~p~IiHrDIKpsNILLd~~~~vKL~DFGL 558 (808)
+- |+.. -.|.++|+||.+.|++.+.++++.|.|=..
T Consensus 175 ~~~~~~l~~~~~~PsLlHGDLW~GN~~~~~~g~p~l~DPa~ 215 (288)
T PF03881_consen 175 ERLPSLLPGREPKPSLLHGDLWSGNVGFDADGEPVLFDPAC 215 (288)
T ss_dssp HHHHHCCTTS----EEE-SS-SGGGEEEETTE-EEE-S---
T ss_pred HHHHHHhcCCCCCceeeEcCccccceeecCCCCceeecccc
Confidence 22 2222 157899999999999999999899988653
No 479
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported
Probab=96.74 E-value=0.012 Score=63.88 Aligned_cols=31 Identities=23% Similarity=0.441 Sum_probs=25.9
Q ss_pred CcEEeeeecccCeeecCCCc-ceecccccccc
Q 003605 531 PRVIHRDFKSSNILLEHDFT-PKVSDFGLARS 561 (808)
Q Consensus 531 p~IiHrDIKpsNILLd~~~~-vKL~DFGLa~~ 561 (808)
+.++|+|+++.|||++++++ .-|.||+.+..
T Consensus 185 ~~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i 216 (276)
T cd05152 185 TVLVHGDLHPGHILIDEDARVTGLIDWTEAKV 216 (276)
T ss_pred CeeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence 45899999999999997555 46999998864
No 480
>PLN02236 choline kinase
Probab=96.45 E-value=0.024 Score=63.31 Aligned_cols=141 Identities=18% Similarity=0.176 Sum_probs=82.9
Q ss_pred eeeeecCcEEEEEEEeeC-----CCEEEEEEeecccchhhHHHHHHHHHHhhcccccce-eEEeeeeeccceEEEEeecC
Q 003605 415 RILGEGGFGLVYSGVLDD-----GTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLV-KLIGICIEEQARCLVYELIP 488 (808)
Q Consensus 415 ~~LG~G~fG~VYkg~l~d-----g~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV-~L~g~~~~~~~~~LV~Ey~~ 488 (808)
+.|-.|-.-.+|+....+ ++.|++|+.......... -.+|..++..+...++. ++++.+.. + .|+||++
T Consensus 42 ~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~~~id-R~~E~~~~~~l~~~gl~P~~~~~~~~-g---~v~efi~ 116 (344)
T PLN02236 42 IPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVELFFD-RDDEIRTFECMSRHGQGPRLLGRFPN-G---RVEEFIH 116 (344)
T ss_pred EEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCCeeec-hHHHHHHHHHHHHcCCCCceEEEECC-c---eEEEeeC
Confidence 345457777899887532 367888887654332222 36799999998655554 55565532 2 5899998
Q ss_pred CCCcccc-----------------ccccccCC--CCCCHHHHHHHHHH-----------------HHHHHHHHH----h-
Q 003605 489 NGSVESH-----------------LHGVDKES--APLGWDARLKIALG-----------------AARALAYLH----E- 527 (808)
Q Consensus 489 ~GsL~~~-----------------L~~~~~~~--~~L~~~~~l~Ia~q-----------------ia~gL~yLH----~- 527 (808)
+.+|... +|...... ...-|.+..++..+ +...+..|. .
T Consensus 117 g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~~~~~~~ 196 (344)
T PLN02236 117 ARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLEKELSGD 196 (344)
T ss_pred CCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHHHHhccc
Confidence 7676421 23221111 11223333333211 112222222 2
Q ss_pred cCCCcEEeeeecccCeeecC-CCcceeccccccc
Q 003605 528 DSSPRVIHRDFKSSNILLEH-DFTPKVSDFGLAR 560 (808)
Q Consensus 528 ~~~p~IiHrDIKpsNILLd~-~~~vKL~DFGLa~ 560 (808)
.....++|+|+++.|||+++ +..+.|+||..+.
T Consensus 197 ~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~ 230 (344)
T PLN02236 197 DQEIGFCHNDLQYGNIMIDEETRAITIIDYEYAS 230 (344)
T ss_pred CCCceEEeCCCCcCcEEEeCCCCcEEEEeehhcc
Confidence 12345899999999999986 4689999998875
No 481
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=96.21 E-value=0.0012 Score=83.17 Aligned_cols=176 Identities=11% Similarity=-0.016 Sum_probs=120.4
Q ss_pred EEEEeecccchhh-----HHHHHHHHHHhhcccccceeEEeeeee--ccceEEEEeecCCCCccccccccccCCCCCCHH
Q 003605 437 AVKVLKRVDQQGG-----REFLAEVEMLSRLHHRNLVKLIGICIE--EQARCLVYELIPNGSVESHLHGVDKESAPLGWD 509 (808)
Q Consensus 437 AVK~lk~~~~~~~-----~~f~~Ei~iL~~L~HpNIV~L~g~~~~--~~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~ 509 (808)
-+|+.+..+-+.. +-...|...++...|.++.....-... ..+.+.+++|+..|.+.+.|-...++...++..
T Consensus 1256 k~~I~ke~d~e~LsePlkemll~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~ 1335 (2724)
T KOG1826|consen 1256 KFSIYKEYDFENLSEPLKEMLLSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRS 1335 (2724)
T ss_pred EEEeehhhhHHHHhhHHHHhhhhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhc
Confidence 4555554333322 223344445556688887766654433 345588999999999999886554455555554
Q ss_pred HHHHHHHHHHHHHHHHHhcC--CCcEEeeeecccCeeecCCCcceecccccccccccccccccccccccccccccchhhh
Q 003605 510 ARLKIALGAARALAYLHEDS--SPRVIHRDFKSSNILLEHDFTPKVSDFGLARSAMDEESRHISTRVMGTFGYVAPEYAM 587 (808)
Q Consensus 510 ~~l~Ia~qia~gL~yLH~~~--~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~~~~~~~~~~~~~~Gt~~Y~APE~l~ 587 (808)
-....-.+......-.|... ....+|+++|+-|.+|+.+.++|++++|+.+... ..........+++.|+.++...
T Consensus 1336 ~v~~~~kvsvl~~~~~ls~tnlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIkn--p~~sf~Gl~l~sp~~v~qli~N 1413 (2724)
T KOG1826|consen 1336 PVHLRHKVSVLNRNVILSLTNLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKN--PVLSFFGLELCSPIYVLQLIKN 1413 (2724)
T ss_pred hHHHHHHHHHhccchhhhcccCCccchhhhhhhhccceecCCcccccccccccccC--chHhhhhhhhCCHHHHHHHHHH
Confidence 44443333344444444332 3457999999999999999999999999988211 2222233456788899999988
Q ss_pred cCCCccccceeeHHHHHHHHHhCCCCC
Q 003605 588 TGHLLVKSDVYSYGVVILELLSGRKPV 614 (808)
Q Consensus 588 ~~~~s~kSDVwSfGvvLlELlTG~~P~ 614 (808)
.-.++.++|+|..|+.+|++.-|..++
T Consensus 1414 ~ik~t~rsdilr~s~~ly~rs~~n~~f 1440 (2724)
T KOG1826|consen 1414 EIKFTKRSDILRRSLSLYLRSDGNAYF 1440 (2724)
T ss_pred HHhhhhHHHHHHHHHHHHHHhcccHHH
Confidence 889999999999999999998887665
No 482
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=96.15 E-value=0.048 Score=60.28 Aligned_cols=138 Identities=20% Similarity=0.277 Sum_probs=79.3
Q ss_pred EEEEEEeeCCCEEEEEEee-cccchhhHHHHHHHHHHhhcc--cccceeEEeeeeecc--ceEEEEeecCCCCccccccc
Q 003605 424 LVYSGVLDDGTKVAVKVLK-RVDQQGGREFLAEVEMLSRLH--HRNLVKLIGICIEEQ--ARCLVYELIPNGSVESHLHG 498 (808)
Q Consensus 424 ~VYkg~l~dg~~VAVK~lk-~~~~~~~~~f~~Ei~iL~~L~--HpNIV~L~g~~~~~~--~~~LV~Ey~~~GsL~~~L~~ 498 (808)
.+|..... ++.+++.+-. ...........+|.++|+.+. ---+...+++|.++. ..+.||+|+++..+.+.+..
T Consensus 40 ~t~~~~~~-~~~~vlR~P~~~~~~~~~~~~~re~~~i~~l~~~~vP~p~~~~~~~~~~~g~pf~v~~~veGe~~~~~~~~ 118 (321)
T COG3173 40 DTFRLGDT-GQKYVLRKPPRGDPVESAHDEKREYRVIAALLDVDVPVPRAFGLCGEGYLGTPFYVMEWVEGEVVWSALPP 118 (321)
T ss_pred ceEEEecC-CceEEEecCCccccchhhhHHHhHHHHHHHhcCCCCCCcccccccccCCCCCceEEEEEecceeccCcCCc
Confidence 34443333 6777777221 122233345567788888774 234456677787765 56999999987544433321
Q ss_pred ---------------------ccc-------------CCCCCCHHHHHHHH--------HHHHHHHHHHHhcC-----CC
Q 003605 499 ---------------------VDK-------------ESAPLGWDARLKIA--------LGAARALAYLHEDS-----SP 531 (808)
Q Consensus 499 ---------------------~~~-------------~~~~L~~~~~l~Ia--------~qia~gL~yLH~~~-----~p 531 (808)
.+. .++.-.|...++.+ -...+-..||+.+. .+
T Consensus 119 ~~~~~~~~~~~l~~~La~LH~ida~~~~~~g~~~~~~~rql~~~~~~~~~~~~~~~~~~p~~~~~~~Wl~~~~p~~~~~~ 198 (321)
T COG3173 119 ESLGRQFALDALADFLAELHSIDAAGLPDPGKPNAYRGRQLARWDDEYRRAKKELGGRIPLADRLIKWLEANRPPWAGPP 198 (321)
T ss_pred ccchHHHHHHHHHHHHHHHhCCCCcCCCCCCccCccccchhhHHHHHHHHHHHhccCCCchHHHHHHHHHhcCCCcCCCc
Confidence 100 00111122222111 11223345555443 35
Q ss_pred cEEeeeecccCeeecCCCcceeccccccccc
Q 003605 532 RVIHRDFKSSNILLEHDFTPKVSDFGLARSA 562 (808)
Q Consensus 532 ~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~ 562 (808)
.++|+|+.+.||+++.+..+-|.||+++...
T Consensus 199 ~lvHGD~~~gNlii~~~~~~gVlDwe~~~lG 229 (321)
T COG3173 199 VLVHGDYRPGNLIIDPGRPTGVLDWELATLG 229 (321)
T ss_pred eeeeCCcccCCEEEeCCCeeEEEeccccccC
Confidence 6999999999999999888999999998753
No 483
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=96.14 E-value=0.0052 Score=67.21 Aligned_cols=146 Identities=18% Similarity=0.217 Sum_probs=96.7
Q ss_pred cCCHHHHHHHhCC---cceeeeeeecCcEEEEEEEeeCCCEEEEEEee--c--------c-------cc-h----hhHHH
Q 003605 398 TFSASEIEKATGN---FDASRILGEGGFGLVYSGVLDDGTKVAVKVLK--R--------V-------DQ-Q----GGREF 452 (808)
Q Consensus 398 ~fs~~el~~at~~---f~~~~~LG~G~fG~VYkg~l~dg~~VAVK~lk--~--------~-------~~-~----~~~~f 452 (808)
.+++-.|....++ +.+.+.||-|.-+-+|.+...+|+..++|.=+ + . .. . ..-..
T Consensus 78 GyDyLAlktL~~R~~v~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa 157 (465)
T KOG2268|consen 78 GYDYLALKTLSNRGSVESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAA 157 (465)
T ss_pred cchHHHHHHHHhcchhhhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHH
Confidence 3455555544433 56778999999999999999999999888521 0 0 00 0 01124
Q ss_pred HHHHHHHhhccc-c-cceeEEeeeeeccceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCC
Q 003605 453 LAEVEMLSRLHH-R-NLVKLIGICIEEQARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSS 530 (808)
Q Consensus 453 ~~Ei~iL~~L~H-p-NIV~L~g~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~ 530 (808)
.+|...|..|.. - -+.+.+++ +..|+|||++.+..|...-+ ..+-.++.. .+..-+--|-.++
T Consensus 158 ~kEfafmkaL~e~gfpVPkpiD~----~RH~Vvmelv~g~Pl~~v~~-------v~d~~~ly~---~lm~~Iv~la~~G- 222 (465)
T KOG2268|consen 158 TKEFAFMKALYERGFPVPKPIDH----NRHCVVMELVDGYPLRQVRH-------VEDPPTLYD---DLMGLIVRLANHG- 222 (465)
T ss_pred HHHHHHHHHHHHcCCCCCCcccc----cceeeHHHhhcccceeeeee-------cCChHHHHH---HHHHHHHHHHHcC-
Confidence 567778888753 2 23444443 45689999998888876543 122233333 2333344566677
Q ss_pred CcEEeeeecccCeeecCCCcceeccccccc
Q 003605 531 PRVIHRDFKSSNILLEHDFTPKVSDFGLAR 560 (808)
Q Consensus 531 p~IiHrDIKpsNILLd~~~~vKL~DFGLa~ 560 (808)
+||+|..-=||+++++..++++||--+.
T Consensus 223 --lIHgDFNEFNimv~dd~~i~vIDFPQmv 250 (465)
T KOG2268|consen 223 --LIHGDFNEFNIMVKDDDKIVVIDFPQMV 250 (465)
T ss_pred --ceecccchheeEEecCCCEEEeechHhh
Confidence 9999999999999999999999996543
No 484
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=96.02 E-value=0.036 Score=61.83 Aligned_cols=137 Identities=21% Similarity=0.269 Sum_probs=89.6
Q ss_pred eeeeecCcEEEEEEEeeCCCEEEEEEeecc-------cc--hhhHH-----------------HHHHHHHHhhcccccce
Q 003605 415 RILGEGGFGLVYSGVLDDGTKVAVKVLKRV-------DQ--QGGRE-----------------FLAEVEMLSRLHHRNLV 468 (808)
Q Consensus 415 ~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~-------~~--~~~~~-----------------f~~Ei~iL~~L~HpNIV 468 (808)
..|..|--..||.++-.+|..+|||+.+.. +. .+.-+ ...|++-|.+|+...|.
T Consensus 150 GCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~aGIP 229 (520)
T KOG2270|consen 150 GCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAGIP 229 (520)
T ss_pred cccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 456778888999999999999999997520 00 00011 23466666666544322
Q ss_pred eEEeeeeeccceEEEEeecCCCCccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCC
Q 003605 469 KLIGICIEEQARCLVYELIPNGSVESHLHGVDKESAPLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHD 548 (808)
Q Consensus 469 ~L~g~~~~~~~~~LV~Ey~~~GsL~~~L~~~~~~~~~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~ 548 (808)
----... ....|||+|+.. + .|-.- .-....|+...+..+-.++++-|.-|...| ++||.||.--|+|+. +
T Consensus 230 ~PePIlL--k~hVLVM~FlGr-d--gw~aP-kLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c--~LVHADLSEfN~Lyh-d 300 (520)
T KOG2270|consen 230 CPEPILL--KNHVLVMEFLGR-D--GWAAP-KLKDASLSTSKARELYQQCVRIMRRLYQKC--RLVHADLSEFNLLYH-D 300 (520)
T ss_pred CCCceee--ecceEeeeeccC-C--CCcCc-ccccccCChHHHHHHHHHHHHHHHHHHHHh--ceeccchhhhhheEE-C
Confidence 1110011 244799999952 2 22210 112235677778888888999999998887 699999999999985 4
Q ss_pred Ccceeccccccc
Q 003605 549 FTPKVSDFGLAR 560 (808)
Q Consensus 549 ~~vKL~DFGLa~ 560 (808)
|.+.|+|-+-+.
T Consensus 301 G~lyiIDVSQSV 312 (520)
T KOG2270|consen 301 GKLYIIDVSQSV 312 (520)
T ss_pred CEEEEEEccccc
Confidence 589999988664
No 485
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=95.73 E-value=0.045 Score=59.44 Aligned_cols=65 Identities=17% Similarity=0.187 Sum_probs=40.1
Q ss_pred EEEEEEeeCCCEEEEEEeecccchhhHHHHHHHHHHhhcccc--cceeEEee------eeeccceEEEEeecCCCCcc
Q 003605 424 LVYSGVLDDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHR--NLVKLIGI------CIEEQARCLVYELIPNGSVE 493 (808)
Q Consensus 424 ~VYkg~l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~Hp--NIV~L~g~------~~~~~~~~LV~Ey~~~GsL~ 493 (808)
.||+...++| .+++|+.... .++...|+..+..|... .+.+++.. ...++..+.++||++|..+.
T Consensus 11 ~v~~v~t~~g-~~~LK~~~~~----~~~~~~~~~~~~~L~~~g~~vp~~i~t~~g~~~~~~~~~~~~l~~~i~G~~~~ 83 (313)
T TIGR02906 11 NVYKVETDSG-NKCLKKINYP----PERLLFILGAQEHLRKNGFNIPKILKTKDGELYVKYNGDLYVLTEWIEGRECD 83 (313)
T ss_pred cEEEEEeCCC-CeEEEEcCCC----HHHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEehhccCcCCC
Confidence 4888776555 5788887521 23455677777777533 33444432 12245678999999886554
No 486
>COG2334 Putative homoserine kinase type II (protein kinase fold) [General function prediction only]
Probab=95.71 E-value=0.085 Score=58.73 Aligned_cols=137 Identities=23% Similarity=0.322 Sum_probs=83.2
Q ss_pred CcEEEEEEEeeCCCEEEEEEeecccchhhHHHHHHHHHHhhcccccc------eeEEeeee--ecc--ceEEEEeecCCC
Q 003605 421 GFGLVYSGVLDDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNL------VKLIGICI--EEQ--ARCLVYELIPNG 490 (808)
Q Consensus 421 ~fG~VYkg~l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNI------V~L~g~~~--~~~--~~~LV~Ey~~~G 490 (808)
.-..+|+....+|+. ++|+.+.. ....+...|+..|..|.-.+| ..+-|-.. -.+ ..+-+++|++|.
T Consensus 37 ~eN~~f~~~~~~g~~-iLki~~~~--~~~~~i~~el~~l~~La~~~i~v~~Pl~~~dG~~l~~~~~~~r~a~lf~~l~G~ 113 (331)
T COG2334 37 EENSNFRVQTEDGRY-ILKIYRPG--WTRAEIPFELALLQHLAERGIPVPAPLPSLDGELLEALSGGPRPAALFEYLPGR 113 (331)
T ss_pred ccCceEEEEecCCCe-EEEEecCC--CCHHHHHHHHHHHHHHHHcCCCCCCCccCCCcchhhhccCCceeEEEEEecCCc
Confidence 456789888887776 77777653 445677788888888853222 22222211 123 667899999988
Q ss_pred Cccc-c--------------cc----ccc----cCCCCCCHHH-------------HHHHHHHHHHHHHHHHhcC----C
Q 003605 491 SVES-H--------------LH----GVD----KESAPLGWDA-------------RLKIALGAARALAYLHEDS----S 530 (808)
Q Consensus 491 sL~~-~--------------L~----~~~----~~~~~L~~~~-------------~l~Ia~qia~gL~yLH~~~----~ 530 (808)
.+.. . || +.. .......|.. ......++...+..+.+.- .
T Consensus 114 ~~~~~~~~~~~~~lG~~LgrlH~a~~~f~~~~p~~~~~~~w~~~~~~~~~~~~~~~~~~l~a~~~~~~~~~~~~~~~~lp 193 (331)
T COG2334 114 PLERDDNAEQLEELGRMLGRLHLALRGFPFERPNALRRLEWDILEPRALLRLDLVEPEDLRAALLAALDRLLARLPAHLP 193 (331)
T ss_pred CcCCCCcHHHHHHHHHHHHHHHHHhCcCCccCCCcccccchhhhcchhhhhhcccCchhhHHHHHHHHHHHHhhchhhCC
Confidence 8873 1 11 111 1112345541 1112333444455544331 1
Q ss_pred ---CcEEeeeecccCeeecCCCc-ceeccccccc
Q 003605 531 ---PRVIHRDFKSSNILLEHDFT-PKVSDFGLAR 560 (808)
Q Consensus 531 ---p~IiHrDIKpsNILLd~~~~-vKL~DFGLa~ 560 (808)
..+||+|+.+.|||+|.+.. +.+.||+-+.
T Consensus 194 ~~~~~iIH~D~~~~NVl~d~~~~~~g~iDFdDa~ 227 (331)
T COG2334 194 ALGDQIIHGDLHPDNVLFDDDTDVSGFIDFDDAG 227 (331)
T ss_pred cccceeeecCCCccceeEcCCCCeeeEEEccccc
Confidence 12899999999999999875 8899999875
No 487
>PF01633 Choline_kinase: Choline/ethanolamine kinase; InterPro: IPR002573 Choline kinase, (ATP:choline phosphotransferase, 2.7.1.32 from EC) belongs to the choline/ethanolamine kinase family. Ethanolamine and choline are major membrane phospholipids, in the form of glycerophosphoethanolamine and glycerophosphocholine. Ethanolamine is also a component of the glycosylphosphatidylinositol (GPI) anchor, which is necessary for cell-surface protein attachment []. The de novo synthesis of these phospholipids begins with the creation of phosphoethanolamine and phosphocholine by ethanolamine and choline kinases in the first step of the CDP-ethanolamine pathway [, ]. There are two putative choline/ethanolamine kinases (C/EKs) in the Trypanosoma brucei genome. Ethanolamine kinase has no choline kinase activity [] and its activity is inhibited by ADP []. Inositol supplementation represses ethanolamine kinase, decreasing the incorporation of ethanolamine into the CDP-ethanolamine pathway and into phosphatidylethanolamine and phosphatidylcholine []. ; GO: 0016773 phosphotransferase activity, alcohol group as acceptor; PDB: 3C5I_A 2IG7_A 3LQ3_A 3FEG_A 2QG7_E 3FI8_A 1NW1_A 3MES_A 3G15_A 2CKP_B ....
Probab=95.31 E-value=0.047 Score=56.25 Aligned_cols=124 Identities=25% Similarity=0.232 Sum_probs=61.7
Q ss_pred CCEEEEEEeecccchhhHHHHHHHHHHhhcccccc-eeEEeeeeeccceEEEEeecCCCCcccc----------------
Q 003605 433 GTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNL-VKLIGICIEEQARCLVYELIPNGSVESH---------------- 495 (808)
Q Consensus 433 g~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNI-V~L~g~~~~~~~~~LV~Ey~~~GsL~~~---------------- 495 (808)
.+.|+||+...... ..-+-..|.++++.+..-++ .++++++.+ .+|+||+++..|..-
T Consensus 2 ~~~~~~Ri~g~~t~-~~idr~~E~~~~~~l~~~g~~p~~~~~~~~----g~v~e~i~g~~l~~~~~~~~~~~~~iA~~l~ 76 (211)
T PF01633_consen 2 PEKYLVRIPGEGTE-NFIDRENENEALKLLSEAGLGPKIIYFFEN----GRVEEFIEGRTLSPEDFRNPEILKRIAKLLA 76 (211)
T ss_dssp TSEEEEEEEESCGC-SHHHHHHHHHHHHHHHHTTSSS-EEEEETT----EEEEE--SSEE--CGGGGSHHHHHHHHHHHH
T ss_pred CCEEEEEeCCCCcc-cccCHHHHHHHHHHHHHcCCCCeEEEEcCC----CcEEEEecccccChhhccChHHHHHHHHHHH
Confidence 46788888876533 23455688999999875555 456655433 267799966554331
Q ss_pred -cccccc---CCCCCCHHHHHHH----------------------HHHHHHHHHHHH----hcCC-CcEEeeeecccCee
Q 003605 496 -LHGVDK---ESAPLGWDARLKI----------------------ALGAARALAYLH----EDSS-PRVIHRDFKSSNIL 544 (808)
Q Consensus 496 -L~~~~~---~~~~L~~~~~l~I----------------------a~qia~gL~yLH----~~~~-p~IiHrDIKpsNIL 544 (808)
+|.... ....--|....++ ...+..-+..+. .... ..++|+|+.+.|||
T Consensus 77 ~lH~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~v~cHnDl~~~Nil 156 (211)
T PF01633_consen 77 KLHSIPISPNSKKPDLWDRIDKYMNKKSEFLFKRKKKKKSIDKEDLEDLQEELEELEKLLEKSNSPLVFCHNDLNPGNIL 156 (211)
T ss_dssp HHHTHHHTTSSSS-HHHHHHHHHHHHHHTCCCCHHTTTCHHHHHHHHHHHHHHHHHHHHHHTSCGGEEEE-S--SGGGEE
T ss_pred HHhhcccccccCcchHHHHhhhhccchhhhhhhhhhhccccccCCHHHHHHHHhhhhhhhhccCCCceEeeccCccccEE
Confidence 111111 0111112222222 011112222222 1112 24799999999999
Q ss_pred e-cCCCcceecccccccc
Q 003605 545 L-EHDFTPKVSDFGLARS 561 (808)
Q Consensus 545 L-d~~~~vKL~DFGLa~~ 561 (808)
+ +.++.++++||..|..
T Consensus 157 ~~~~~~~~~lIDfEya~~ 174 (211)
T PF01633_consen 157 INNKDGEVKLIDFEYAGY 174 (211)
T ss_dssp ETSSSSCEEE--GTT-EE
T ss_pred eccCCCeEEEecHHHHhh
Confidence 9 8889999999998753
No 488
>PLN03150 hypothetical protein; Provisional
Probab=94.99 E-value=0.025 Score=68.28 Aligned_cols=69 Identities=9% Similarity=0.011 Sum_probs=43.9
Q ss_pred cccCCchhhHhhhcccccceeeecccCCCCceEEeeeCC---CCCCCCCCCCCCCCccCCCCCCCCCCCCCCCC
Q 003605 232 GEKFDNTTAFLTYQRFWHKQVVIKSSYFGDYEVLYVRYP---GLPPSPPSASSSIGIIDDGPYSGNNGRATKPE 302 (808)
Q Consensus 232 ~~~~~~~~~~~l~~~~~~g~vp~~~~~~~~~~~~~~~~~---g~~P~~p~~~~~~~~~~~~~~~Gn~~~~~~p~ 302 (808)
-..+.+|+.|+|++|.++|.+|...+.+.+.+.+++... |.+|..-.... .......+.||..+|+.|.
T Consensus 462 ~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls~N~l~g~iP~~l~~~~--~~~~~l~~~~N~~lc~~p~ 533 (623)
T PLN03150 462 LGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLNGNSLSGRVPAALGGRL--LHRASFNFTDNAGLCGIPG 533 (623)
T ss_pred HhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECcCCcccccCChHHhhcc--ccCceEEecCCccccCCCC
Confidence 456788999999999999999987888888777766543 44443211100 0011123567888887654
No 489
>PRK11768 serine/threonine protein kinase; Provisional
Probab=94.98 E-value=0.52 Score=52.25 Aligned_cols=94 Identities=17% Similarity=0.152 Sum_probs=54.8
Q ss_pred cCCHHHHHHHhCCccee---e-eeeecCcEEEEEEEeeCCCEEEEEEeecccchhhHHHHHHHHHHhhcccc--cceeEE
Q 003605 398 TFSASEIEKATGNFDAS---R-ILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHR--NLVKLI 471 (808)
Q Consensus 398 ~fs~~el~~at~~f~~~---~-~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~Hp--NIV~L~ 471 (808)
.++.+.+..+...+.+. + ..=.+.-..||+...++++.+++|..+.. .....+...|++.+..|... .++..+
T Consensus 10 ~l~p~~~~~a~~~~g~~~~~~~~~l~s~eN~vy~v~~~~~~~~vlKv~r~~-~~~~~~i~~E~~~l~~L~~~gipv~~p~ 88 (325)
T PRK11768 10 TLTPDLILDALESLGLRVDGRLLALNSYENRVYQFGDEDGRRVVAKFYRPE-RWSDAQILEEHAFALELAEAEIPVVAPL 88 (325)
T ss_pred CCChHHHHHHHHHcCCCCccceEeeccccceEEEEecCCCCEEEEEEcCcc-cCCHHHHHHHHHHHHHHHHCCCCCCCCc
Confidence 34555555554444221 1 22234567899998888888999987532 22445677888888877422 222211
Q ss_pred ---e--eeeeccceEEEEeecCCCCc
Q 003605 472 ---G--ICIEEQARCLVYELIPNGSV 492 (808)
Q Consensus 472 ---g--~~~~~~~~~LV~Ey~~~GsL 492 (808)
| ....++..+.++++++|...
T Consensus 89 ~~~G~~~~~~~g~~~~l~~~~~G~~~ 114 (325)
T PRK11768 89 AFNGQTLHEHQGFRFALFPRRGGRAP 114 (325)
T ss_pred cCCCCEEEEECCEEEEEEeeeCCCCC
Confidence 1 11223556789999987654
No 490
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=94.91 E-value=0.15 Score=56.00 Aligned_cols=31 Identities=16% Similarity=0.174 Sum_probs=27.8
Q ss_pred CcEEeeeecccCeeecCCCcceecccccccc
Q 003605 531 PRVIHRDFKSSNILLEHDFTPKVSDFGLARS 561 (808)
Q Consensus 531 p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~ 561 (808)
..++|+|+.+.|||++.++.+.|+||..+..
T Consensus 196 ~~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~ 226 (309)
T TIGR02904 196 TVLVHGKLSLSHFLYDETRGGYFINFEKASF 226 (309)
T ss_pred eeeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence 3599999999999999999999999998764
No 491
>PLN02756 S-methyl-5-thioribose kinase
Probab=94.70 E-value=0.41 Score=54.79 Aligned_cols=73 Identities=11% Similarity=0.116 Sum_probs=50.1
Q ss_pred eeeeeecCcEEEEEEEeeCCCEEEEEEeec----ccc---hhhHHHHHHHHHHhhcc---cccceeEEeeeeeccceEEE
Q 003605 414 SRILGEGGFGLVYSGVLDDGTKVAVKVLKR----VDQ---QGGREFLAEVEMLSRLH---HRNLVKLIGICIEEQARCLV 483 (808)
Q Consensus 414 ~~~LG~G~fG~VYkg~l~dg~~VAVK~lk~----~~~---~~~~~f~~Ei~iL~~L~---HpNIV~L~g~~~~~~~~~LV 483 (808)
.+.||.|....||+.... +..++||+-.. ... ....+-..|.+.|..+. ..++.+++.+|. +..+++
T Consensus 37 ~~eiggGn~N~VyrV~~~-~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~de--d~~vlv 113 (418)
T PLN02756 37 IKEVGDGNLNFVYIVVSS-SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDR--TMALIG 113 (418)
T ss_pred EEEcCCCceeeEEEEEcC-CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECC--CCCEEE
Confidence 467899999999998764 55688997541 111 12334445577776653 247888898887 456789
Q ss_pred EeecCC
Q 003605 484 YELIPN 489 (808)
Q Consensus 484 ~Ey~~~ 489 (808)
|||+++
T Consensus 114 ME~L~~ 119 (418)
T PLN02756 114 MRYLEP 119 (418)
T ss_pred EeecCC
Confidence 999976
No 492
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.53 E-value=0.45 Score=50.34 Aligned_cols=136 Identities=24% Similarity=0.321 Sum_probs=82.9
Q ss_pred eeeecCcEEEEEEEeeCCCEEEEEEeecccchhhHHHHHHHHHHhhcc---cccceeEEeeeeeccceEEEEeecCCCCc
Q 003605 416 ILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLH---HRNLVKLIGICIEEQARCLVYELIPNGSV 492 (808)
Q Consensus 416 ~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~---HpNIV~L~g~~~~~~~~~LV~Ey~~~GsL 492 (808)
.+.-|.--..|.... +...+.||+-. ......|.+|+.-|..|. .-++.+.+.+-.+.+..++|+||++-|.+
T Consensus 23 ~v~gG~inea~~v~d-g~~~~FvK~n~---~~~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L~~~~~ 98 (286)
T COG3001 23 EVSGGDINEAWRLRD-GTDPFFVKCNQ---REQLSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYLPTGPL 98 (286)
T ss_pred ccCCccccceeEeec-CCcceEEEecc---hhhHHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeeccCCCC
Confidence 344444444554433 34678888643 344567889998888774 35577888888888999999999998877
Q ss_pred ccc-----------cccccc--------------CCCC----CCHH-----HHHHHHHHHH--------------HHHHH
Q 003605 493 ESH-----------LHGVDK--------------ESAP----LGWD-----ARLKIALGAA--------------RALAY 524 (808)
Q Consensus 493 ~~~-----------L~~~~~--------------~~~~----L~~~-----~~l~Ia~qia--------------~gL~y 524 (808)
+.. ||.-.. ...+ -+|. +|+-+..++| ..+..
T Consensus 99 d~~~~~~~GqqLA~LH~~~~~~~fG~d~dn~iG~t~QpN~W~~~Wa~FfaeqRig~qlqlar~rg~~f~did~~~~~v~e 178 (286)
T COG3001 99 DAHSAFILGQQLARLHQWGGQAQFGLDFDNYIGTTPQPNTWQRRWATFFAEQRIGWQLQLARERGLTFGDIDAIVEKIQE 178 (286)
T ss_pred CchhHHHHHHHHHHHHhhcCccccCcccccccCCCCCCCCCcchHHHHHHHhhhhHHHHHHHHhCCCccCHHHHHHHHHH
Confidence 621 221100 0011 2232 2332223322 23333
Q ss_pred HHhcC--CCcEEeeeecccCeeecCCCcceeccc
Q 003605 525 LHEDS--SPRVIHRDFKSSNILLEHDFTPKVSDF 556 (808)
Q Consensus 525 LH~~~--~p~IiHrDIKpsNILLd~~~~vKL~DF 556 (808)
|=... .|.++|+||...|+.+..++ +.+.|=
T Consensus 179 lL~~hqpqPsLlHGDLW~gN~a~~~~G-Pv~fDP 211 (286)
T COG3001 179 LLADHQPQPSLLHGDLWSGNCAFGKDG-PVIFDP 211 (286)
T ss_pred HHhcCCCCcceeecccccccccccCCC-Ceeecc
Confidence 33333 37899999999999999888 766553
No 493
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=94.49 E-value=0.18 Score=56.73 Aligned_cols=73 Identities=16% Similarity=0.142 Sum_probs=48.1
Q ss_pred eeeecCcEEEEEEEeeCC-CEEEEEEeec-------ccchhhHHHHHHHHHHhhcc--ccc-ceeEEeeeeeccceEEEE
Q 003605 416 ILGEGGFGLVYSGVLDDG-TKVAVKVLKR-------VDQQGGREFLAEVEMLSRLH--HRN-LVKLIGICIEEQARCLVY 484 (808)
Q Consensus 416 ~LG~G~fG~VYkg~l~dg-~~VAVK~lk~-------~~~~~~~~f~~Ei~iL~~L~--HpN-IV~L~g~~~~~~~~~LV~ 484 (808)
.||.|-...||++...+| +.|+||.-.. ......++..-|.+.|.... .|. +.+++. .+.+...+||
T Consensus 2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~--~D~e~~~~vM 79 (370)
T TIGR01767 2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFH--FDTEMAVTVM 79 (370)
T ss_pred cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEE--EccccceehH
Confidence 478899999999998755 5899997431 11334456667788887663 343 344443 3445667999
Q ss_pred eecCCC
Q 003605 485 ELIPNG 490 (808)
Q Consensus 485 Ey~~~G 490 (808)
|+++..
T Consensus 80 EdL~~~ 85 (370)
T TIGR01767 80 EDLSHH 85 (370)
T ss_pred hhCccc
Confidence 998653
No 494
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=94.21 E-value=0.45 Score=52.86 Aligned_cols=141 Identities=18% Similarity=0.237 Sum_probs=81.0
Q ss_pred eeeeecCcEEEEEEEeeC----CCEEEEEEeecccchhhHHHHHHHHHHhhcccccce-eEEeeeeeccceEEEEeecCC
Q 003605 415 RILGEGGFGLVYSGVLDD----GTKVAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLV-KLIGICIEEQARCLVYELIPN 489 (808)
Q Consensus 415 ~~LG~G~fG~VYkg~l~d----g~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV-~L~g~~~~~~~~~LV~Ey~~~ 489 (808)
+.|..|-...+|+....+ +..|++|+....... .-+-.+|..++..+..-++- ++++++. +. +|.+|+++
T Consensus 20 ~~l~gGlTN~~~~v~~~~~~~~~~~~v~Ri~g~~t~~-~IdR~~E~~il~~l~~~gl~P~~l~~~~--~G--~i~~fi~g 94 (330)
T PLN02421 20 ERISGGITNLLLKVSVKEENGNEVSVTVRLFGPNTDY-VIDRERELQAIKYLSAAGFGAKLLGVFG--NG--MIQSFINA 94 (330)
T ss_pred EEeCCcccceEEEEEecCCCCCCceEEEEEecCCcCe-EechHHHHHHHHHHHhcCCCCceeEEeC--Cc--EeehhhcC
Confidence 445457777889887543 237888887654332 22346789999999765553 5666553 22 58999977
Q ss_pred CCcccc-----------------ccccccC--CCCCCHHHHHHHHHHH----------------------HHHHHHHH--
Q 003605 490 GSVESH-----------------LHGVDKE--SAPLGWDARLKIALGA----------------------ARALAYLH-- 526 (808)
Q Consensus 490 GsL~~~-----------------L~~~~~~--~~~L~~~~~l~Ia~qi----------------------a~gL~yLH-- 526 (808)
..|... ||...-. ...--|....++..++ .+-+..+.
T Consensus 95 ~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~ 174 (330)
T PLN02421 95 RTLTPSDMRKPKVAAEIAKELRRLHQVEIPGSKEPQLWNDIFKFYEKASTVKFEDPEKQKKYETISFEELRDEIVELKEI 174 (330)
T ss_pred CCCChHHCCCHHHHHHHHHHHHHHhCCCCCCCCCCcHHHHHHHHHHHhhhcccCcHHHhhhhcccCHHHHHHHHHHHHHH
Confidence 665321 2221111 1111233332222111 11122221
Q ss_pred --hcC-CCcEEeeeecccCeeecC-CCcceeccccccc
Q 003605 527 --EDS-SPRVIHRDFKSSNILLEH-DFTPKVSDFGLAR 560 (808)
Q Consensus 527 --~~~-~p~IiHrDIKpsNILLd~-~~~vKL~DFGLa~ 560 (808)
..+ ...++|+|+.+.|||+++ ++.++++||..|.
T Consensus 175 ~~~~~~~~v~CHnDl~~~NiL~~~~~~~l~lID~EYag 212 (330)
T PLN02421 175 TDSLKAPVVFAHNDLLSGNLMLNEDEGKLYFIDFEYGS 212 (330)
T ss_pred hccCCCCeEEEECCCCcccEEEeCCCCcEEEEcccccC
Confidence 112 234799999999999975 5789999999875
No 495
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=94.17 E-value=0.041 Score=52.24 Aligned_cols=38 Identities=8% Similarity=0.026 Sum_probs=27.1
Q ss_pred ccCCCCceeehhhhhHHHHHHHHHHHHHHHHhhccccc
Q 003605 312 KYGLSGGMIAIVVLSAFVAVVLCSAAAWVLLFKYKSHA 349 (808)
Q Consensus 312 ~~gls~~~I~iIvv~~vv~lvl~~~v~~~~~~rrk~~~ 349 (808)
.++++.+.|++|++|+++++++++++++++++|+|||.
T Consensus 58 ~h~fs~~~i~~Ii~gv~aGvIg~Illi~y~irR~~Kk~ 95 (122)
T PF01102_consen 58 VHRFSEPAIIGIIFGVMAGVIGIILLISYCIRRLRKKS 95 (122)
T ss_dssp SSSSS-TCHHHHHHHHHHHHHHHHHHHHHHHHHHS---
T ss_pred ccCccccceeehhHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 34688889999999998888887777777777766553
No 496
>PTZ00384 choline kinase; Provisional
Probab=94.10 E-value=0.37 Score=54.84 Aligned_cols=74 Identities=19% Similarity=0.213 Sum_probs=44.9
Q ss_pred eeeeecCcEEEEEEEeeCC--CE-----EEEEEeecccchhhHHHHHHHHHHhhcccccce-eEEeeeeeccceEEEEee
Q 003605 415 RILGEGGFGLVYSGVLDDG--TK-----VAVKVLKRVDQQGGREFLAEVEMLSRLHHRNLV-KLIGICIEEQARCLVYEL 486 (808)
Q Consensus 415 ~~LG~G~fG~VYkg~l~dg--~~-----VAVK~lk~~~~~~~~~f~~Ei~iL~~L~HpNIV-~L~g~~~~~~~~~LV~Ey 486 (808)
+.|..|-...+|++...++ .. |.++..... ....-+-.+|++++..+...++- ++++.+.. .+|+||
T Consensus 56 ~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~-~~l~IdR~~E~~i~~~Ls~~glgP~l~~~f~~----g~l~ef 130 (383)
T PTZ00384 56 KKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTY-NSLVIDNDLQYNIAKLLGDNNFGPKIIGRFGD----FTIQEW 130 (383)
T ss_pred EEeCCcccceEEEEEecCCCCCccccceEEEEeccCC-CceEeccHHHHHHHHHHHhCCCCCeEEEecCC----EEEEEE
Confidence 4555577889999876533 22 333332111 11112335789999999766654 45555532 599999
Q ss_pred cCCCCcc
Q 003605 487 IPNGSVE 493 (808)
Q Consensus 487 ~~~GsL~ 493 (808)
+++.+|.
T Consensus 131 IeGr~l~ 137 (383)
T PTZ00384 131 VEGNTMG 137 (383)
T ss_pred eccccCC
Confidence 9987765
No 497
>PF02958 EcKinase: Ecdysteroid kinase; InterPro: IPR004119 This family includes proteins of unknown function. All known members of this group are proteins from drosophila and Caenorhabditis elegans.
Probab=93.76 E-value=0.52 Score=50.94 Aligned_cols=30 Identities=40% Similarity=0.479 Sum_probs=25.2
Q ss_pred cEEeeeecccCeeecCC--C---cceecccccccc
Q 003605 532 RVIHRDFKSSNILLEHD--F---TPKVSDFGLARS 561 (808)
Q Consensus 532 ~IiHrDIKpsNILLd~~--~---~vKL~DFGLa~~ 561 (808)
.++|||++.+|||+..+ + ++++.||-+++.
T Consensus 216 vl~HGD~w~nNilf~~~~~g~~~~~~liDfQ~~~~ 250 (294)
T PF02958_consen 216 VLCHGDFWTNNILFKYDDDGKPIDVVLIDFQLARY 250 (294)
T ss_pred EEEcCccCHHhEeEccccccccccceeeccccccC
Confidence 48999999999999654 3 689999988764
No 498
>KOG1093 consensus Predicted protein kinase (contains TBC and RHOD domains) [General function prediction only]
Probab=93.74 E-value=0.034 Score=64.25 Aligned_cols=47 Identities=23% Similarity=0.313 Sum_probs=36.5
Q ss_pred HHHHHHHHHHhhcccccceeEEeeeeecc-ceEEEEeecCCCCcccccc
Q 003605 450 REFLAEVEMLSRLHHRNLVKLIGICIEEQ-ARCLVYELIPNGSVESHLH 497 (808)
Q Consensus 450 ~~f~~Ei~iL~~L~HpNIV~L~g~~~~~~-~~~LV~Ey~~~GsL~~~L~ 497 (808)
.+++-...+++.+.|+|+...+++-.... ...+|+|++ +-||++.+.
T Consensus 27 ~~ilgr~~~lktl~~~~l~~yl~~~r~~~~r~IVV~e~~-~~Sled~~~ 74 (725)
T KOG1093|consen 27 IQILGRFQYLKSLQHDNLCQYLDFSRGKHERVIVVMEHY-TMSLEDILK 74 (725)
T ss_pred HHHhhhhHHHHhhcCccceeeEeeecCccceEEEEehhh-ccchHHHHH
Confidence 34556677888999999999998876543 357889999 669998885
No 499
>PRK06148 hypothetical protein; Provisional
Probab=93.61 E-value=0.48 Score=60.45 Aligned_cols=142 Identities=22% Similarity=0.274 Sum_probs=78.5
Q ss_pred eeeeecCcEEEEEEEeeCCCEEEEEEeecccchhhHHHHHHHHHHhhcc-------cccceeEE-ee----eee-cc--c
Q 003605 415 RILGEGGFGLVYSGVLDDGTKVAVKVLKRVDQQGGREFLAEVEMLSRLH-------HRNLVKLI-GI----CIE-EQ--A 479 (808)
Q Consensus 415 ~~LG~G~fG~VYkg~l~dg~~VAVK~lk~~~~~~~~~f~~Ei~iL~~L~-------HpNIV~L~-g~----~~~-~~--~ 479 (808)
+.|+ |..-.+|+....+|..+++|+.+... .......|.+.|..|. -|.+++-. |- ... ++ .
T Consensus 31 ~~L~-s~~d~nf~v~~~~g~~yVLKi~~~~~--~~~~~~~q~~~L~hL~~~~~glpvP~~i~t~~G~~~~~v~~~~G~~~ 107 (1013)
T PRK06148 31 TPLD-GERDLNFRLTTDDGADYILKIVNPSE--PRVESDFQTAALDHLAAVAPDLPVPRLIPSLSGASLASAQDPDGEPR 107 (1013)
T ss_pred eecC-CcCCceEEEEeCCCCeEEEEEcCCcc--chhHHHHHHHHHHHHHhhCCCCCcCeeeecCCCCeEEEeecCCCceE
Confidence 4553 45678899888888899999987532 2234445556666553 22222211 11 111 22 3
Q ss_pred eEEEEeecCCCCccccc-----------------c----cc--ccCCCCCCHHHH-----------------HHHHHHHH
Q 003605 480 RCLVYELIPNGSVESHL-----------------H----GV--DKESAPLGWDAR-----------------LKIALGAA 519 (808)
Q Consensus 480 ~~LV~Ey~~~GsL~~~L-----------------~----~~--~~~~~~L~~~~~-----------------l~Ia~qia 519 (808)
.+-+++|+++..|.+.. | +. ......+.|... ..++.++.
T Consensus 108 ~vrLl~~l~G~~l~~~~~~t~~~~~~lG~~larlh~al~~F~~p~~~r~~~Wdl~~~~~l~~~l~~i~d~~~r~~l~~~~ 187 (1013)
T PRK06148 108 LLRLLSWLPGTPLAEAAPRTEALLDNLGRALGRLDRALQGFMHPGALRDLDWDLRHAGRARDRLHFIDDPEDRALVERFL 187 (1013)
T ss_pred EEEEEeccCCCcHHhccCCCHHHHHHHHHHHHHHHHHHhcCCCCCcccccccccccchhhhhhhhhcCCHHHHHHHHHHH
Confidence 56789999987776511 1 01 011123445321 12222222
Q ss_pred HHHH-----HHHhcCCCcEEeeeecccCeeecCCC--cce-eccccccc
Q 003605 520 RALA-----YLHEDSSPRVIHRDFKSSNILLEHDF--TPK-VSDFGLAR 560 (808)
Q Consensus 520 ~gL~-----yLH~~~~p~IiHrDIKpsNILLd~~~--~vK-L~DFGLa~ 560 (808)
+... .|.+ -...+||+|+.+.|||++.+. ++. |+|||-+.
T Consensus 188 ~~~~~~v~p~l~~-Lp~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~ 235 (1013)
T PRK06148 188 ARFERNVAPRLAA-LPAQVIHNDANDYNILVDADDGERISGLIDFGDAV 235 (1013)
T ss_pred HHHHHHHHHHHhc-CCcceECCCCCcccEEEcCCCCcceEEEEECcccc
Confidence 2221 1211 123599999999999998875 555 99999875
No 500
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=93.53 E-value=0.091 Score=58.66 Aligned_cols=55 Identities=22% Similarity=0.277 Sum_probs=48.0
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhcCCCcEEeeeecccCeeecCCCcceeccccccccc
Q 003605 505 PLGWDARLKIALGAARALAYLHEDSSPRVIHRDFKSSNILLEHDFTPKVSDFGLARSA 562 (808)
Q Consensus 505 ~L~~~~~l~Ia~qia~gL~yLH~~~~p~IiHrDIKpsNILLd~~~~vKL~DFGLa~~~ 562 (808)
.-.|.+.+.|+++.+..++-|..+- +.=|||+.-.||||| +|++-|+||-++|.-
T Consensus 317 ~~~~~e~lsff~s~~sil~~lekkf--~fehrnlt~~niLId-~GnvtLIDfklsRl~ 371 (488)
T COG5072 317 ADRSEEELSFFWSCISILDILEKKF--PFEHRNLTLDNILID-EGNVTLIDFKLSRLS 371 (488)
T ss_pred cccHHHHHHHHHHHHHHHhhhhhcC--Ccccccccccceeee-cCceEEEEeeeeecc
Confidence 3678999999999988887777654 689999999999999 999999999999843
Done!