Query 003612
Match_columns 807
No_of_seqs 314 out of 1940
Neff 6.4
Searched_HMMs 29240
Date Tue Mar 26 18:36:16 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/003612.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1661-1665//hhsearch_pdb/003612hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4e8d_A Glycosyl hydrolase, fam 1.0 1 1 1153.3 50.9 555 28-687 2-585 (595)
2 3thd_A Beta-galactosidase; TIM 1.0 1 1 1136.6 48.6 574 23-689 4-622 (654)
3 3d3a_A Beta-galactosidase; pro 1.0 1 1 1070.3 52.4 575 27-699 5-600 (612)
4 1tg7_A Beta-galactosidase; TIM 1.0 1 1 971.6 47.5 645 26-686 2-946 (971)
5 3og2_A Beta-galactosidase; TIM 1.0 1 1 908.7 53.5 645 22-685 18-977 (1003)
6 3u7v_A Beta-galactosidase; str 1.0 1 1 302.8 14.0 170 27-211 39-226 (552)
7 1vem_A Beta-amylase; beta-alph 1.0 1 1 213.3 7.6 247 42-309 12-297 (516)
8 1kwg_A Beta-galactosidase; TIM 1.0 1 1 201.7 20.3 273 46-348 1-391 (645)
9 3tty_A Beta-GAL, beta-galactos 1.0 1 1 201.4 22.0 286 43-351 7-390 (675)
10 3pzg_A Mannan endo-1,4-beta-ma 1.0 1 1 186.5 8.6 181 32-219 15-221 (383)
No 1
>4e8d_A Glycosyl hydrolase, family 35; TIM barrel, beta-propeller, glycohydrolase; 1.80A {Streptococcus pneumoniae} PDB: 4e8c_A
Probab=1.00 E-value=1 Score=1153.30 Aligned_cols=555 Identities=25% Similarity=0.441 Sum_probs=460.5
Q ss_pred CEEEEECCEEEECCEEEEEEEEEEECCCCCHHCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEECCCCHHHHHHHHHH
Q ss_conf 33998078199979897999998509999901099999999986998899821187678989701004920299999999
Q 003612 28 NNVTYDGRSLIINGHRKILFSGSIHYPRSTPQMWPRLIAKAKEGGLDVVQTLVFWNLHEPQPGQFDFSGRRDLVRFIKEV 107 (807)
Q Consensus 28 ~~v~~~~~~f~l~G~~~~~~~g~~hy~r~~~~~W~~~l~~~ka~G~N~V~~yv~W~~hEp~~G~~df~g~~dl~~fl~~a 107 (807)
.+|+++ ++|++||||++++||++||+|+|+++|+++|+|||++|+|+|++||||+.|||+||+|||++++||++||++|
T Consensus 2 ~~F~i~-~~f~~dG~p~~i~~G~~Hy~r~p~~~W~d~l~kmKa~G~NtV~~yv~W~~hEP~~G~fdF~g~~dL~~fl~~a 80 (595)
T 4e8d_A 2 TRFEIR-DDFYLDGKSFKILSGAIHYFRVPPEDWYHSLYNLKALGFNTVETYVAWNLHEPCEGEFHFEGDLDLEKFLQIA 80 (595)
T ss_dssp CCEEES-SSEEETTEECCCEEEEECGGGSCGGGHHHHHHHHHHTTCCEEEEECCHHHHCSBTTBCCCSGGGCHHHHHHHH
T ss_pred CEEEEC-CEEEECCEEEEEEEEEECHHHCCHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCEECCCCHHHHHHHHHHH
T ss_conf 707967-7799999898998998572229999999999999973997799853678708988754134636699999999
Q ss_pred HHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCC
Q ss_conf 98696899841774443335788785346689964468980239999999999999998633211369964851634666
Q 003612 108 QAQGLYVCLRIGPFIEGEWGYGGLPFWLHDVPGIVFRSDNEPFKFHMKRYATMIVNMMKAARLYASQGGPIILSQIENEY 187 (807)
Q Consensus 108 ~~~GL~Vilr~GPyi~aE~~~GG~P~Wl~~~p~~~~R~~d~~~~~~~~~~~~~i~~~i~~~~~~~~~gg~II~~QieNEy 187 (807)
+++||+|||||||||||||++||+|.||.++| +++|++||.|++++++|+++|+++|+ ++++++|||||||||||||
T Consensus 81 ~~~Gl~VilrpGPYi~aEw~~GG~P~WL~~~p-~~lRt~~p~y~~~~~~~~~~l~~~l~--~~~~~~GgpVI~~QvENEy 157 (595)
T 4e8d_A 81 QDLGLYAIVRPSPFICAEWEFGGLPAWLLTKN-MRIRSSDPAYIEAVGRYYDQLLPRLV--PRLLDNGGNILMMQVENEY 157 (595)
T ss_dssp HHTTCEEEEECCSCCCTTBGGGGCCGGGGGSS-SCSSSSCHHHHHHHHHHHHHHGGGTG--GGBGGGTSCEEEEESSSSG
T ss_pred HHCCCEEEEECCCCEECCCCCCCCCHHHCCCC-CEECCCCHHHHHHHHHHHHHHHHHHH--HHHCCCCCCEEEEECCCCC
T ss_conf 98699899704774301217782775550687-45315897999999999999999998--8741069988999755434
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCC-------CC--CCCCCCCC-CCCCCCCCCC-----CCCCCC-
Q ss_conf 53213568897689999999988339963418805789-------99--42223678-8766877889-----999999-
Q 003612 188 GMVEHSFLEKGPPYVRWAAKLAVDLQTGVPWVMCKQDD-------AP--DPVINACN-GRQCGETFAG-----PNSPDK- 251 (807)
Q Consensus 188 g~~~~~~~~~~~~y~~~l~~~~~~~g~~vp~~~~~~~~-------~~--~~~~~~~n-g~~~~~~~~~-----~~~~~~- 251 (807)
|++ + ++++||+||+++++++|++|||+||++.+ .. ++++++|| +.+|.+.|.. +.+|++
T Consensus 158 G~~----~-~~~~Y~~~l~~~~~~~Gi~vpl~t~d~~~~~~~~~G~~~~~~~~~t~nfg~~~~~~~~~~~~~~~~~p~~~ 232 (595)
T 4e8d_A 158 GSY----G-EDKAYLRAIRQLMEECGVTCPLFTSDGPWRATLKAGTLIEEDLFVTGNFGSKAPYNFSQMQEFFDEHGKKW 232 (595)
T ss_dssp GGT----C-CCHHHHHHHHHHHHHTTCCSCEEEEECSSHHHHHHHCCGGGTCEEEEEESSCHHHHHHHHHHHHHHTTCCC
T ss_pred CCC----C-CCHHHHHHHHHHHHHCCCCEEEEECCCCCHHCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCC
T ss_conf 665----7-71899999999999759967899825951310458853788837776179856676778887630389999
Q ss_pred CCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCC--------CCCCCCCCCCCC
Q ss_conf 942101355323445897644798899999999999418804668786526796887887--------532245678987
Q 003612 252 PAIWTENWTSFYQVYGDEARIRSAEDIAYHVALFIAKMKGSYVNYYMYHGGTNFGRTASA--------YVLTGYYDQAPL 323 (807)
Q Consensus 252 P~~~~E~~~Gwf~~WG~~~~~~~~~~~~~~~~~~~~~~g~s~~n~YM~hGGTNfG~~~g~--------~~~TSYDy~Api 323 (807)
|+||+|||+||||+||++++++++++++..+++++++ | ++||||||||||||+++|+ .++|||||||||
T Consensus 233 P~~~~Ef~~Gwfd~WG~~~~~~~~~~~~~~~~~~l~~-g--s~N~YM~hGGTNfG~~~Ga~~~~~~~~p~~TSYDYdApi 309 (595)
T 4e8d_A 233 PLMCMEFWDGWFNRWKEPIITRDPKELADAVREVLEQ-G--SINLYMFHGGTNFGFMNGCSARGTLDLPQVTSYDYDALL 309 (595)
T ss_dssp CCEEEEEECSCCCBTTSCCCCCCHHHHHHHHHHHHHH-S--EEEEEEEECCBCCTTCBCEEEETTEEEEBCSBCCTTCSB
T ss_pred CEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-C--CCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 8089863165445569987778999999999999976-9--954985545327242468777777777877766779805
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCEEEEECCCEECCCCC
Q ss_conf 87798888027999999999864126665776311367875300131268420012102577886079865601105986
Q 003612 324 DEYGLLRQPKWGHLKELHSAVKLCLKPMLSGVLVSMNFSKLQEAFIFQGSSECAAFLVNKDKRNNATVYFSNLMYELPPL 403 (807)
Q Consensus 324 ~E~G~~~t~Ky~~lr~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~fl~~~~~~~~~~v~~~~~~~~~~~~ 403 (807)
+|+|++ ||||.++|+++..+. .+...+. |. ..++..|. +|.+.. ..+++
T Consensus 310 ~E~G~~-t~Ky~~lr~~i~~~~--~~~p~~~-P~------~~~~~~~~------------------~v~l~~---~~~L~ 358 (595)
T 4e8d_A 310 DEEGNP-TAKYLAVKKMMATHF--SEYPQLE-PL------YKESMELD------------------AIPLVE---KVSLF 358 (595)
T ss_dssp CTTSCB-CHHHHHHHHHHHHHC--TTSCCCC-CC------CCCBCCEE------------------EEEEEE---EEEHH
T ss_pred CCCCCC-CHHHHHHHHHHHHHC--CCCCCCC-CC------CCCCCCCC------------------EEEECC---CCCHH
T ss_conf 867783-478999999999747--7999999-98------77643565------------------087504---15489
Q ss_pred CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEEEEEEECCCCCCCCEEEECCC
Q ss_conf 30004677621123532342001100023445576554342201432037788887289999970799999631694772
Q 003612 404 SISILPDCKTVAFNTAKLDSVEQWEEYKEAIPTYDETSLRANFLLEQMNTTKDASDYLWYNFRFKHDPSDSESVLKVSSL 483 (807)
Q Consensus 404 ~v~i~~~~~~~~~~t~~v~~~~~w~~~~e~~~~~~~~~~~~p~~~Eql~~t~d~~GyilY~t~v~~~~~~~~~~L~i~~~ 483 (807)
+ ..+.+.+++.+ ..|++||+|+| .+||+||||+++... .+..|++.++
T Consensus 359 ~---------------------~l~~l~~~~~s------~~P~~mE~lgq---~~GyvlY~t~i~~~~--~~~~L~~~~~ 406 (595)
T 4e8d_A 359 E---------------------TLDSLSSPVES------LYPQKMEELGQ---SYGYLLYRTETNWDA--EEERLRIIDG 406 (595)
T ss_dssp H---------------------HHHHHCCCEEE------SSCCBTGGGTC---CSSEEEEEEEEECSS--SSEEEEEEEE
T ss_pred H---------------------HHHHCCCCCCC------CCCCCHHHCCC---CCCEEEEEECCCCCC--CCCEEECCCC
T ss_conf 9---------------------66550776436------99889889299---767599982268888--8734632787
Q ss_pred CEEEEEEECCEEEEEEECCCCCCCEEEEEEEEECCCC-CEEEEEEECCCCCCCCCCC--CCCCCCEEE-EEECCCCCCCC
Q ss_conf 3299999989799999634678512798456412786-4799999417865642343--442241437-99878314311
Q 003612 484 GHVLHAFINGEFVGSAHGKHSDKSFTLEKMVHLINGT-NNVSLLSVMVGLPDSGAYL--ERRVAGLRN-VSIQGAKELKD 559 (807)
Q Consensus 484 ~D~a~Vfvng~~vG~~~~~~~~~~~~~~~~~~l~~g~-~~L~ILven~Gr~N~G~~~--~~~~kGI~g-V~l~g~~~~~~ 559 (807)
||||+|||||+++|+++++....+ + +++...+. ++|+||||||||+|||+.| ++++|||+| |+|++. .
T Consensus 407 ~Dra~Vfvdg~~~g~l~r~~~~~~--i--~~~~~~~~~~~L~ILVEN~GRvNyG~~~~~~~~~KGi~g~V~l~~~----~ 478 (595)
T 4e8d_A 407 RDRAQLYVDGQWVKTQYQTEIGED--I--FYQGKKKGLSRLDILIENMGRVNYGHKFLADTQRKGIRTGVCKDLH----F 478 (595)
T ss_dssp ESEEEEEETTEEEEEEEGGGTTSC--E--EECCCSSSEEEEEEEEECCCCCCSGGGTTCGGGSCEEEEEEEETTE----E
T ss_pred CEEEEEEECCEEEEEEECCCCCCE--E--EEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEECCE----E
T ss_conf 448999989979999974567614--7--8535778877899999858975167556868888787887699999----8
Q ss_pred CCCCCCE-EECCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEECCCCEEEEEECCEEEEEC
Q ss_conf 5778616-940374100000026899754565589889889439999997899999618964788219999968321011
Q 003612 560 FSSFSWG-YQVGLLGEKLQIFTDYGSRIVPWSRYGSSTHQPLTWYKTVFDAPTGSDPVAINLISMGKGEAWVNGQSIGRY 638 (807)
Q Consensus 560 L~~~~W~-~~~~l~~e~~~~~~~~~~~~~~w~~~~~~~~~~~~~yk~~F~~~~~~d~~fLd~~g~gKG~vwVNG~nlGRY 638 (807)
|+ +|+ |+++|+... .+.|..... ..+|+||+++|+++++.| |||||+||+||+|||||+|||||
T Consensus 479 l~--~W~~~~L~l~~~~----------~~~~~~~~~--~~~P~fy~g~f~~~~~~D-TfLd~~gwgKG~v~VNG~nLGRY 543 (595)
T 4e8d_A 479 LL--NWKHYPLPLDNPE----------KIDFSKGWT--QGQPAFYAYDFTVEEPKD-TYLDLSEFGKGVAFVNGQNLGRF 543 (595)
T ss_dssp CC--CEEEEEECCCCGG----------GCCTTSCCC--TTSCEEEEEEEEESSCCB-EEEECTTCCEEEEEETTEEEEEE
T ss_pred CC--CCEEEEECCCHHH----------HCCCCCCCC--CCCCEEEEEEEECCCCCC-EEEECCCCCEEEEEECCEEEECC
T ss_conf 57--8489763331132----------223455667--889758999997599888-79967888648899887213524
Q ss_pred CCCCCCCCCCCCCEEECCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEC
Q ss_conf 2135589999830110357543345442799999338999906997212
Q 003612 639 WVSFLTPQGTPSQSWYHIPRSFLKPTGNLLVLLEEENGYPPGISIDTVS 687 (807)
Q Consensus 639 W~~~~~~~gGPQqtlYhVP~~~Lk~g~N~ivifE~~~~~p~~i~~~~~~ 687 (807)
|+ + ||||||| ||++|||+|+|+|||||+++.....|+|++..
T Consensus 544 W~-~-----GPQ~tLY-vP~~~Lk~G~NeIvvfEl~~~~~~~i~~~~~p 585 (595)
T 4e8d_A 544 WN-V-----GPTLSLY-IPHSYLKEGANRIIIFETEGQYKEEIHLTRKP 585 (595)
T ss_dssp ET-T-----CSBCEEE-ECGGGSCSEEEEEEEEESSSCCCSEEEEESSC
T ss_pred CC-C-----CCEEEEE-ECHHHHCCCCCEEEEEEECCCCCCEEEEECCC
T ss_conf 67-7-----9768899-63899576872699999527888547863466
No 2
>3thd_A Beta-galactosidase; TIM-barrel domain, glycosyl hydrolase, glycosylation, hydrolase; HET: NAG DGJ; 1.79A {Homo sapiens} PDB: 3thc_A*
Probab=1.00 E-value=1 Score=1136.57 Aligned_cols=574 Identities=25% Similarity=0.412 Sum_probs=455.8
Q ss_pred CCCCCCEEEEECCEEEECCEEEEEEEEEEECCCCCHHCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEECCCCHHHHH
Q ss_conf 99997339980781999798979999985099999010999999999869988998211876789897010049202999
Q 003612 23 GGGGGNNVTYDGRSLIINGHRKILFSGSIHYPRSTPQMWPRLIAKAKEGGLDVVQTLVFWNLHEPQPGQFDFSGRRDLVR 102 (807)
Q Consensus 23 ~~~~~~~v~~~~~~f~l~G~~~~~~~g~~hy~r~~~~~W~~~l~~~ka~G~N~V~~yv~W~~hEp~~G~~df~g~~dl~~ 102 (807)
..+++..|++|+++|++||||++++||++||+|+|+++|+++|+|||++|+|+|++||+|+.|||+||+|||+|++||++
T Consensus 4 ~~~r~~~v~~d~~~f~ldGkp~~i~sG~~Hy~r~p~~~W~d~l~kmKa~G~NtV~~yv~W~~hEP~~G~fdF~g~~DL~~ 83 (654)
T 3thd_A 4 ATQRMFEIDYSRDSFLKDGQPFRYISGSIHYSRVPRFYWKDRLLKMKMAGLNAIQTYVPWNFHEPWPGQYQFSEDHDVEY 83 (654)
T ss_dssp --CCCEEEETTTTEEEETTEEECCEEEECCGGGSCGGGHHHHHHHHHHTTCSEEEEECCHHHHCSBTTBCCCSGGGCHHH
T ss_pred CCCCCEEEEECCCEEEECCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEEECHHHCCCCCCCCCCCCHHHHHH
T ss_conf 67871799972897999997878988864645499899999999999719988999963364089898467455377999
Q ss_pred HHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECC
Q ss_conf 99999986968998417744433357887853466899644689802399999999999999986332113699648516
Q 003612 103 FIKEVQAQGLYVCLRIGPFIEGEWGYGGLPFWLHDVPGIVFRSDNEPFKFHMKRYATMIVNMMKAARLYASQGGPIILSQ 182 (807)
Q Consensus 103 fl~~a~~~GL~Vilr~GPyi~aE~~~GG~P~Wl~~~p~~~~R~~d~~~~~~~~~~~~~i~~~i~~~~~~~~~gg~II~~Q 182 (807)
||++|+++||+|||||||||||||++||+|.||.++|++.+|++||.|++++++|+++|+++++ ++++++||||||||
T Consensus 84 fl~~a~~~GL~ViLr~GPyi~aEw~~GG~P~WL~~~p~i~~Rt~~p~y~~~~~~~~~~l~~~l~--~~~~~~ggpVI~~Q 161 (654)
T 3thd_A 84 FLRLAHELGLLVILRPGPYICAEWEMGGLPAWLLEKESILLRSSDPDYLAAVDKWLGVLLPKMK--PLLYQNGGPVITVQ 161 (654)
T ss_dssp HHHHHHHTTCEEEEECCSCCCTTBGGGGCCGGGGGSTTCCSSSCCHHHHHHHHHHHHHHHHHHG--GGBGGGTSSEEEEE
T ss_pred HHHHHHHCCCEEEECCCCCCCCCCCCCCCCHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHH--HHHCCCCCCEEEEE
T ss_conf 9999998699899556774321038886896785599845742998999999999999999852--43124799789998
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCCCCEEEECCCCCCCCCCCCC---CCCCCCCCCCC------------C
Q ss_conf 346665321356889768999999998833-9963418805789994222367---88766877889------------9
Q 003612 183 IENEYGMVEHSFLEKGPPYVRWAAKLAVDL-QTGVPWVMCKQDDAPDPVINAC---NGRQCGETFAG------------P 246 (807)
Q Consensus 183 ieNEyg~~~~~~~~~~~~y~~~l~~~~~~~-g~~vp~~~~~~~~~~~~~~~~~---ng~~~~~~~~~------------~ 246 (807)
||||||+ |+.++++||+||+++++++ |++||+++||+.. +.+..| +|.+|+.+|.. .
T Consensus 162 vENEyG~----y~~~d~~Ym~~l~~~~~~~~Gi~v~l~t~D~~~---~~~~~~g~~~g~~~t~~f~~~~~~~~~~~~~~~ 234 (654)
T 3thd_A 162 VENEYGS----YFACDFDYLRFLQKRFRHHLGDDVVLFTTDGAH---KTFLKCGALQGLYTTVDFGTGSNITDAFLSQRK 234 (654)
T ss_dssp CSSCGGG----SSCCCHHHHHHHHHHHHHHHCSSSEEEEEEESS---HHHHHHHCBTTBEEEEECCTTSCHHHHHHHHHH
T ss_pred ECCCCCC----CCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCC---CCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHH
T ss_conf 3144566----565619999999999987449965569606985---344347875771310246879637899999997
Q ss_pred CCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCC-----CCCCCCCCC
Q ss_conf 999999421013553234458976447988999999999994188046687865267968878875-----322456789
Q 003612 247 NSPDKPAIWTENWTSFYQVYGDEARIRSAEDIAYHVALFIAKMKGSYVNYYMYHGGTNFGRTASAY-----VLTGYYDQA 321 (807)
Q Consensus 247 ~~~~~P~~~~E~~~Gwf~~WG~~~~~~~~~~~~~~~~~~~~~~g~s~~n~YM~hGGTNfG~~~g~~-----~~TSYDy~A 321 (807)
.+|++|+||+|||+||||+||++++.+++++++..++++++. |++ +||||||||||||+|+|+. ++|||||||
T Consensus 235 ~~p~~P~~~~Ef~~Gwfd~WG~~~~~~~~~~~~~~~~~~l~~-g~s-~N~YM~hGGTNfG~~~Ga~~~~~~~~TSYDYdA 312 (654)
T 3thd_A 235 CEPKGPLINSEFYTGWLDHWGQPHSTIKTEAVASSLYDILAR-GAS-VNLYMFIGGTNFAYWNGANSPYAAQPTSYDYDA 312 (654)
T ss_dssp HCSSSCCEEEEEESSCCCCTTSCCCCCCHHHHHHHHHHHHHT-TCE-EEEECSBCCBCCTTCBCEETTTEECCSBCCTTC
T ss_pred HCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCC-EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 489989599610153577579987788989999999999965-984-589863453362324678877887356676787
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCEEEEECCCEECCC
Q ss_conf 87877988880279999999998641266657763113678753001312684200121025778860798656011059
Q 003612 322 PLDEYGLLRQPKWGHLKELHSAVKLCLKPMLSGVLVSMNFSKLQEAFIFQGSSECAAFLVNKDKRNNATVYFSNLMYELP 401 (807)
Q Consensus 322 pi~E~G~~~t~Ky~~lr~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~fl~~~~~~~~~~v~~~~~~~~~~ 401 (807)
||+|+|++ ||||.++|+++. .+.+...+. .|+..++..|.. |.+. ...+
T Consensus 313 pi~E~G~~-t~Ky~~lr~li~---~~~~~~~~~------~P~~~p~~~~~~------------------v~l~---~~~~ 361 (654)
T 3thd_A 313 PLSEAGDL-TEKYFALRNIIQ---KFEKVPEGP------IPPSTPKFAYGK------------------VTLE---KLKT 361 (654)
T ss_dssp SBCTTCCB-CHHHHHHHHHHT---TTSCCCCSC------CCCCCCBCCCEE------------------EECE---EEEE
T ss_pred CCCCCCCC-CHHHHHHHHHHH---HHCCCCCCC------CCCCCCCCCCCC------------------EEEC---CCCC
T ss_conf 24635673-378999999999---714799888------999876456675------------------7522---2234
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCHHHHHHCC--CCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEEEEEEECCCCCCCCEEE
Q ss_conf 863000467762112353234200110002--344557655434220143203778888728999997079999963169
Q 003612 402 PLSISILPDCKTVAFNTAKLDSVEQWEEYK--EAIPTYDETSLRANFLLEQMNTTKDASDYLWYNFRFKHDPSDSESVLK 479 (807)
Q Consensus 402 ~~~v~i~~~~~~~~~~t~~v~~~~~w~~~~--e~~~~~~~~~~~~p~~~Eql~~t~d~~GyilY~t~v~~~~~~~~~~L~ 479 (807)
++++ .+.+. +++.+ ..|++||+|+| .+||+||||+++... ..+..|+
T Consensus 362 L~~~---------------------l~~l~~~~~~~s------~~P~tmE~l~Q---~~GyvlY~t~i~~~~-~~~~~l~ 410 (654)
T 3thd_A 362 VGAA---------------------LDILCPSGPIKS------LYPLTFIQVKQ---HYGFVLYRTTLPQDC-SNPAPLS 410 (654)
T ss_dssp TTTT---------------------HHHHCTTCCEEE------SSCCBTGGGTC---CSSEEEEEEECSSCE-EEEEEEE
T ss_pred HHHH---------------------HHHHCCCCCCCC------CCCCCHHHHCC---CCCEEEEEEECCCCC-CCCCCEE
T ss_conf 8997---------------------776276777536------99889899288---757699983257777-8884034
Q ss_pred --ECCCCEEEEEEECCEEEEEEECCCCCCCEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCEEE-EEECCCCC
Q ss_conf --477232999999897999996346785127984564127864799999417865642343442241437-99878314
Q 003612 480 --VSSLGHVLHAFINGEFVGSAHGKHSDKSFTLEKMVHLINGTNNVSLLSVMVGLPDSGAYLERRVAGLRN-VSIQGAKE 556 (807)
Q Consensus 480 --i~~~~D~a~Vfvng~~vG~~~~~~~~~~~~~~~~~~l~~g~~~L~ILven~Gr~N~G~~~~~~~kGI~g-V~l~g~~~ 556 (807)
+.++||||+|||||+++|++++.. ..++ ++..+.+ ++|+||||||||+|||+.| +++|||+| |+|++.
T Consensus 411 l~~~~v~Dra~Vfvdg~~~G~l~r~~---~~~l--~~~~~~~-~~L~ILVEN~GRvNyG~~i-~d~KGi~g~V~l~~~-- 481 (654)
T 3thd_A 411 SPLNGVHDRAYVAVDGIPQGVLERNN---VITL--NITGKAG-ATLDLLVENMGRVNYGAYI-NDFKGLVSNLTLSSN-- 481 (654)
T ss_dssp CTTCCEESEEEEEETTEEEEEEETTT---BCEE--EEEECTT-CEEEEEEECCCCBCSSGGG-CCCCEECSCCEETTE--
T ss_pred ECCCCCCEEEEEEECCEEEEEEECCC---CEEE--ECCCCCC-CEEEEEEECCCCCCCCCCC-CCCCCCCCCEEECCE--
T ss_conf 30478632799988997999996156---5267--5058889-8899999748865468877-878988776578999--
Q ss_pred CCCCCCCCCE-EECCCCCCHHHCCCC-----CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCC----CCEEEEECCCCEE
Q ss_conf 3115778616-940374100000026-----89975456558988988943999999789999----9618964788219
Q 003612 557 LKDFSSFSWG-YQVGLLGEKLQIFTD-----YGSRIVPWSRYGSSTHQPLTWYKTVFDAPTGS----DPVAINLISMGKG 626 (807)
Q Consensus 557 ~~~L~~~~W~-~~~~l~~e~~~~~~~-----~~~~~~~w~~~~~~~~~~~~~yk~~F~~~~~~----d~~fLd~~g~gKG 626 (807)
.|+ +|+ |+++|+......... .......|..... ...+|+||+++|++++.. .+|||||+||+||
T Consensus 482 --~l~--~W~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~P~fy~g~f~i~~~~~~~p~DTFLd~~gWgKG 556 (654)
T 3thd_A 482 --ILT--DWTIFPLDTEDAVRSHLGGWGHRDSGHHDEAWAHNSS-NYTLPAFYMGNFSIPSGIPDLPQDTFIQFPGWTKG 556 (654)
T ss_dssp --ECC--CEEEEECCHHHHHHTTTTTTCCC---------------CCCCCEEEEEEECCCSSCTTCSCBEEEECTTCCSE
T ss_pred --ECC--CCEEEEECCCHHHHHHHCCCCCCCCCCCCCCCCCCCC-CCCCCEEEEEEEECCCCCCCCCCCEEEECCCCCEE
T ss_conf --827--8489865261255443201223333222334456666-78887799999972677788887779967888707
Q ss_pred EEEECCEEEEECCCCCCCCCCCCCCEEECCCCCCCCCC-CCEEEEEEECCCCC-------CEEEEEEE-CCC
Q ss_conf 99996832101121355899998301103575433454-42799999338999-------90699721-233
Q 003612 627 EAWVNGQSIGRYWVSFLTPQGTPSQSWYHIPRSFLKPT-GNLLVLLEEENGYP-------PGISIDTV-SVT 689 (807)
Q Consensus 627 ~vwVNG~nlGRYW~~~~~~~gGPQqtlYhVP~~~Lk~g-~N~ivifE~~~~~p-------~~i~~~~~-~~~ 689 (807)
+||||||||||||+++ ||||||| ||++|||+| +|+|||||+++... ..|+|.+. +.+
T Consensus 557 vV~VNG~NLGRYW~~~-----GPQ~TLY-vP~p~Lk~G~~NeIiVfEle~~~~~~~~~~~~~i~~~~~P~l~ 622 (654)
T 3thd_A 557 QVWINGFNLGRYWPAR-----GPQLTLF-VPQHILMTSAPNTITVLELEWAPCSSDDPELCAVTFVDRPVIG 622 (654)
T ss_dssp EEEETTEEEEEECTTT-----CSCCCEE-ECGGGCCSSSCEEEEEEESSCCSCSSSCGGGSEEEEESSCCCS
T ss_pred EEEECCCCCCCCCCCC-----CCEEEEE-ECHHHHCCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCCC
T ss_conf 9998980254254777-----9768889-6489958899846999995168765555665259963556569
No 3
>3d3a_A Beta-galactosidase; protein structure initiative II, PSI II, NYSGXRC, 11092F, structural genomics; 2.15A {Bacteroides thetaiotaomicron vpi-5482}
Probab=1.00 E-value=1 Score=1070.31 Aligned_cols=575 Identities=25% Similarity=0.478 Sum_probs=469.5
Q ss_pred CCEEEEECCEEEECCEEEEEEEEEEECCCCCHHCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEECCCCHHHHHHHHH
Q ss_conf 73399807819997989799999850999990109999999998699889982118767898970100492029999999
Q 003612 27 GNNVTYDGRSLIINGHRKILFSGSIHYPRSTPQMWPRLIAKAKEGGLDVVQTLVFWNLHEPQPGQFDFSGRRDLVRFIKE 106 (807)
Q Consensus 27 ~~~v~~~~~~f~l~G~~~~~~~g~~hy~r~~~~~W~~~l~~~ka~G~N~V~~yv~W~~hEp~~G~~df~g~~dl~~fl~~ 106 (807)
..+|++++++|++||||++++||++||+|+++++|+++|++||++|+|+||+||||+.|||+||+|||++..|+++|+++
T Consensus 5 ~r~v~~~~~~f~lnGkp~~i~gg~~Hy~r~~~e~w~~dl~~mK~~G~N~Vrt~v~W~~hEP~~G~ydf~gl~~l~~fl~l 84 (612)
T 3d3a_A 5 EGTFEVGKNTFLLNGEPFVVKAAEIHYPRIPKEYWEHRIKMCKALGMNTICLYVFWNFHEPEEGRYDFAGQKDIAAFCRL 84 (612)
T ss_dssp CCCEEECSSSEEETTEEECCEEEEECGGGSCGGGHHHHHHHHHHHTCCEEEEECCHHHHCSSTTCCCCSGGGCHHHHHHH
T ss_pred CCEEEEECCEEEECCEEEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCHHHHCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 66699839999999989999888826766998999999999997399899972707732898983480689899999999
Q ss_pred HHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCC
Q ss_conf 99869689984177444333578878534668996446898023999999999999999863321136996485163466
Q 003612 107 VQAQGLYVCLRIGPFIEGEWGYGGLPFWLHDVPGIVFRSDNEPFKFHMKRYATMIVNMMKAARLYASQGGPIILSQIENE 186 (807)
Q Consensus 107 a~~~GL~Vilr~GPyi~aE~~~GG~P~Wl~~~p~~~~R~~d~~~~~~~~~~~~~i~~~i~~~~~~~~~gg~II~~QieNE 186 (807)
|+++||+||+|+||||||||++||+|.|+.+.+++.+|++||.|++++++|+++++++++ +++++|||+|||||||||
T Consensus 85 a~e~GL~VIl~~gpyi~~ew~~gG~P~Wl~~~~~~~~r~~dp~y~~~~~~~~~~l~~r~~--~~~~~n~p~II~wqIeNE 162 (612)
T 3d3a_A 85 AQENGMYVIVRPGPYVCAEWEMGGLPWWLLKKKDIKLREQDPYYMERVKLFLNEVGKQLA--DLQISKGGNIIMVQVENE 162 (612)
T ss_dssp HHHTTCEEEEECCSCCCTTBGGGGCCGGGGGSTTCCSSSCCHHHHHHHHHHHHHHHHHHG--GGBGGGTSSEEEEECSSC
T ss_pred HHHCCCEEEEECCCCCCCCCCCCCCCHHHCCCCCCEECCCCHHHHHHHHHHHHHHHHHHH--HHHHCCCCCEEEEEECCC
T ss_conf 997799999956854466011489735422478833437998999999999999999874--110006997778740344
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCC-CCCEEEECCC-----CCCCCCCCCCCCCCCC----CCCCC--CCCCCCCCE
Q ss_conf 6532135688976899999999883399-6341880578-----9994222367887668----77889--999999942
Q 003612 187 YGMVEHSFLEKGPPYVRWAAKLAVDLQT-GVPWVMCKQD-----DAPDPVINACNGRQCG----ETFAG--PNSPDKPAI 254 (807)
Q Consensus 187 yg~~~~~~~~~~~~y~~~l~~~~~~~g~-~vp~~~~~~~-----~~~~~~~~~~ng~~~~----~~~~~--~~~~~~P~~ 254 (807)
||+ |+ .+++|++++++++++.|+ +||+++|+.. ...+++++++| |.+. +.+.. ..+|++|.|
T Consensus 163 yg~----yg-~~~~y~~~l~~~l~~~g~~~vp~~~~~~~~~~~~~~~~~~~~t~n-f~s~~~~~~~~~~~~~~~p~~P~~ 236 (612)
T 3d3a_A 163 YGA----FG-IDKPYISEIRDMVKQAGFTGVPLFQCDWNSNFENNALDDLLWTIN-FGTGANIDEQFKRLKELRPDTPLM 236 (612)
T ss_dssp GGG----TC-CCHHHHHHHHHHHHHHTCCSSCEEEEECTTTGGGTCCTTSEEEEE-EETTCCHHHHHHHHHHHCTTSCCE
T ss_pred CCC----CC-CHHHHHHHHHHHHHHCCCCCHHHEECCCCCCCCCCCCCCCCCCCC-CCCCCCHHHHHHHHHHHCCCCCCE
T ss_conf 565----57-659999999999987189960330004563222577787666455-677721789999998745589962
Q ss_pred EECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCC----C--CCCCCCCCCCCCCCCC
Q ss_conf 101355323445897644798899999999999418804668786526796887887----5--3224567898787798
Q 003612 255 WTENWTSFYQVYGDEARIRSAEDIAYHVALFIAKMKGSYVNYYMYHGGTNFGRTASA----Y--VLTGYYDQAPLDEYGL 328 (807)
Q Consensus 255 ~~E~~~Gwf~~WG~~~~~~~~~~~~~~~~~~~~~~g~s~~n~YM~hGGTNfG~~~g~----~--~~TSYDy~Api~E~G~ 328 (807)
++|||+|||++||++++.+++++++.++++++++ |+| +||||||||||||+++|+ + ++|||||||||+|+|+
T Consensus 237 ~~E~~~Gwf~~wg~~~~~~~~~~~~~~~~~~l~~-g~s-~n~YM~hGGTNfG~~~ga~~~~~~~~~tSYDy~Apl~E~g~ 314 (612)
T 3d3a_A 237 CSEFWSGWFDHWGAKHETRSAEELVKGMKEMLDR-NIS-FSLYMTHGGTSFGHWGGANFPNFSPTCTSYDYDAPINESGK 314 (612)
T ss_dssp EEEEECSCCCBTTSCCCCCCHHHHHHHHHHHHTT-TCE-EEEECSBCCBCCTTCBCEETTTTEEBCSBCCTTCSBCTTSC
T ss_pred EECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCC-EEEEEEECCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCC
T ss_conf 0023467650124777667999999999999986-996-68635301347785666688776641453136872475787
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEEECCCCCCCEEEEECCCEECCCCCCCCCC
Q ss_conf 88802799999999986412666577631136787530013126842001210257788607986560110598630004
Q 003612 329 LRQPKWGHLKELHSAVKLCLKPMLSGVLVSMNFSKLQEAFIFQGSSECAAFLVNKDKRNNATVYFSNLMYELPPLSISIL 408 (807)
Q Consensus 329 ~~t~Ky~~lr~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~fl~~~~~~~~~~v~~~~~~~~~~~~~v~i~ 408 (807)
+ ||||.++|+++.. + ++.+.+.+ +++.......| +.+.+
T Consensus 315 ~-~~ky~~lr~~~~~---~---~~~~~~~~-~~p~~~~~~~~------------------~~~~~--------------- 353 (612)
T 3d3a_A 315 V-TPKYLEVRNLLGN---Y---LPEGETLP-EIPDSIPTIAI------------------PTIKM--------------- 353 (612)
T ss_dssp C-CHHHHHHHHHHTT---S---SCTTCCCC-CCCCCCCBCCE------------------EEEEC---------------
T ss_pred C-CHHHHHHHHHHHH---H---CCCCCCCC-CCCCCCCCCCC------------------CCEEE---------------
T ss_conf 3-2789999999998---5---34677767-78888764545------------------65877---------------
Q ss_pred CCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEEEEEEECCCCCCCCEEEECCCCEEEE
Q ss_conf 67762112353234200110002344557655434220143203778888728999997079999963169477232999
Q 003612 409 PDCKTVAFNTAKLDSVEQWEEYKEAIPTYDETSLRANFLLEQMNTTKDASDYLWYNFRFKHDPSDSESVLKVSSLGHVLH 488 (807)
Q Consensus 409 ~~~~~~~~~t~~v~~~~~w~~~~e~~~~~~~~~~~~p~~~Eql~~t~d~~GyilY~t~v~~~~~~~~~~L~i~~~~D~a~ 488 (807)
.++++ .|+.+.+++.+ ..|++||||+| .+||+||||+++... ....|++.+++|||+
T Consensus 354 -------~~~~~-----l~~~~~~~~~~------~~p~~~E~l~q---~~gy~lY~t~i~~~~--~~~~L~i~~~~D~a~ 410 (612)
T 3d3a_A 354 -------TEMAV-----LFDNLPHPKES------EDIRTMEAFDQ---GWGSILYRTSLSASD--KEQTLLITEAHDWAQ 410 (612)
T ss_dssp -------CEEEE-----GGGGCCCCEEE------SSCCBGGGGTC---CSSEEEEEEEECCBS--SCEEEEEEEEESEEE
T ss_pred -------EEEEE-----HHHHCCCCCCC------CCCCCHHHHCC---CCCEEEEEEEECCCC--CCCEEEECCCCEEEE
T ss_conf -------42615-----88847886347------89889999598---777599998854788--875498547870899
Q ss_pred EEECCEEEEEEECCCCCCCEEEEEEEEECCCCCEEEEEEECCCCCCCCCCCCCCCCCEEE-EEECCCCCCCCCCCCCCE-
Q ss_conf 999897999996346785127984564127864799999417865642343442241437-998783143115778616-
Q 003612 489 AFINGEFVGSAHGKHSDKSFTLEKMVHLINGTNNVSLLSVMVGLPDSGAYLERRVAGLRN-VSIQGAKELKDFSSFSWG- 566 (807)
Q Consensus 489 Vfvng~~vG~~~~~~~~~~~~~~~~~~l~~g~~~L~ILven~Gr~N~G~~~~~~~kGI~g-V~l~g~~~~~~L~~~~W~- 566 (807)
|||||+++|++++......+ .+ .+..|.++|+||||||||+|||+.| .++|||+| |+|++.++..+|+ +|+
T Consensus 411 Vfvng~~~G~~~~~~~~~~~--~~--~~~~~~~~L~iLven~Gr~NyG~~~-~~~kGi~g~V~l~~~~~~~~l~--~W~~ 483 (612)
T 3d3a_A 411 VFLNGKKLATLSRLKGEGVV--KL--PPLKEGDRLDILVEAMGRMNFGKGI-YDWKGITEKVELQSDKGVELVK--DWQV 483 (612)
T ss_dssp EEETTEEEEEEETTTTCCEE--EE--CCBCTTEEEEEEEECCCCCCSGGGG-CCCCEEEEEEEEEETTEEEECC--CEEE
T ss_pred EEECCEEEEEEECCCCCCEE--EE--ECCCCCCEEEEEEEECCCCCCCCCC-CCCCCCCCCEEECCCCCCEECC--CCEE
T ss_conf 99999999999811477269--86--5378985899999956987668545-5798777626985886743436--8669
Q ss_pred EECCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEECCCCEEEEEECCEEEEECCCCCCCCC
Q ss_conf 94037410000002689975456558988988943999999789999961896478821999996832101121355899
Q 003612 567 YQVGLLGEKLQIFTDYGSRIVPWSRYGSSTHQPLTWYKTVFDAPTGSDPVAINLISMGKGEAWVNGQSIGRYWVSFLTPQ 646 (807)
Q Consensus 567 ~~~~l~~e~~~~~~~~~~~~~~w~~~~~~~~~~~~~yk~~F~~~~~~d~~fLd~~g~gKG~vwVNG~nlGRYW~~~~~~~ 646 (807)
|+++|+++.. ..+.|...... ..+|+|||++|+++++.| |||||+|||||+|||||+||||||. +
T Consensus 484 y~l~l~~~~~--------~~~~~~~~~~~-~~~p~~yk~~f~~~~~~D-t~Ld~~g~gKG~vwVNG~nlGRYW~-~---- 548 (612)
T 3d3a_A 484 YTIPVDYSFA--------RDKQYKQQENA-ENQPAYYRSTFNLNELGD-TFLNMMNWSKGMVWVNGHAIGRYWE-I---- 548 (612)
T ss_dssp EEECCCHHHH--------HSSCCBC------CCCEEEEEEEEESSCCB-EEEECTTCCEEEEEETTEEEEEEET-T----
T ss_pred EEECCCCCCC--------CCCCCCCCCCC-CCCCEEEEEEEECCCCCC-EEEECCCCCCEEEEECCEEEEEEEE-C----
T ss_conf 9834676422--------23553456777-889889999998899873-8996577873799998875890895-2----
Q ss_pred CCCCCEEECCCCCCCCCCCCEEEEEEECCCCCCEEEEEE-ECCCCCCCCCCCCC
Q ss_conf 998301103575433454427999993389999069972-12333333333578
Q 003612 647 GTPSQSWYHIPRSFLKPTGNLLVLLEEENGYPPGISIDT-VSVTTLCGHVSDSH 699 (807)
Q Consensus 647 gGPQqtlYhVP~~~Lk~g~N~ivifE~~~~~p~~i~~~~-~~~~~~c~~~~E~~ 699 (807)
||||||| ||++|||+|+|+||||||++..+..|++++ .+.+.+-...++.|
T Consensus 549 -GPqqtlY-vP~~~Lk~g~N~ivvfE~~~~~~~~i~~~~~p~~~~~~~~~~~~~ 600 (612)
T 3d3a_A 549 -GPQQTLY-VPGCWLKKGENEIIILDMAGPSKAETEGLRQPILDVQRGNGAYAH 600 (612)
T ss_dssp -CSCCEEE-ECGGGCCSEEEEEEEEESSCCSSSEEEEESSCCCSCCCSSCSSCG
T ss_pred -CCEEEEE-ECHHHCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCCCCC
T ss_conf -9889988-158991789748999997689885488546655588764566655
No 4
>1tg7_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family GH35, glycopr penicillium, hydrolase; HET: NAG BMA MAN; 1.90A {Penicillium SP} SCOP: b.149.1.1 b.18.1.27 b.18.1.27 b.71.1.5 c.1.8.14 PDB: 1xc6_A*
Probab=1.00 E-value=1 Score=971.61 Aligned_cols=645 Identities=24% Similarity=0.365 Sum_probs=503.2
Q ss_pred CCCEEEEECCEEEECCEEEEEEEEEEECCCCC-HHCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEECCCCHHHHHHH
Q ss_conf 97339980781999798979999985099999-01099999999986998899821187678989701004920299999
Q 003612 26 GGNNVTYDGRSLIINGHRKILFSGSIHYPRST-PQMWPRLIAKAKEGGLDVVQTLVFWNLHEPQPGQFDFSGRRDLVRFI 104 (807)
Q Consensus 26 ~~~~v~~~~~~f~l~G~~~~~~~g~~hy~r~~-~~~W~~~l~~~ka~G~N~V~~yv~W~~hEp~~G~~df~g~~dl~~fl 104 (807)
....|++|+++|++||||++++||++||+|+| |++|+++|+|||++|+|+|++||||+.|||+||+|||+|++||++||
T Consensus 2 ~~~~v~~d~~~~~idG~p~~l~sG~~hy~r~p~~~~W~d~l~kmka~G~NtV~~yvfW~~hEP~~G~fdF~g~~dL~~fl 81 (971)
T 1tg7_A 2 LQKYVTWDEHSIFVNGERLMIFSGEVHPYRLPVASLYIDIFEKVKALGFNCVSFYVDWALLEGNPGHYSAEGIFDLQPFF 81 (971)
T ss_dssp CCSSEEECSSCEEETTEEECEEEEECCGGGSCCGGGHHHHHHHHHTTTCCEEEEECCHHHHCSBTTBCCCCGGGCSHHHH
T ss_pred CCCEEEECCCEEEECCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHCCCCCEECCCCHHHHHHHH
T ss_conf 65369984887999994999999888821089467899999999970999999964677708988832245667899999
Q ss_pred HHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCC
Q ss_conf 99998696899841774443335788785346689964468980239999999999999998633211369964851634
Q 003612 105 KEVQAQGLYVCLRIGPFIEGEWGYGGLPFWLHDVPGIVFRSDNEPFKFHMKRYATMIVNMMKAARLYASQGGPIILSQIE 184 (807)
Q Consensus 105 ~~a~~~GL~Vilr~GPyi~aE~~~GG~P~Wl~~~p~~~~R~~d~~~~~~~~~~~~~i~~~i~~~~~~~~~gg~II~~Qie 184 (807)
++|+++||+|||||||||||||++||+|.||.++|+ .+|++||.|++++++|+++|+++++++ ++++||||||||||
T Consensus 82 ~~a~e~Gl~ViLr~GPyi~aE~~~GG~P~WL~~~p~-~lR~~~p~y~~~~~~~~~~l~~~~~~~--~~~~ggpVI~~Qve 158 (971)
T 1tg7_A 82 DAAKEAGIYLLARPGPYINAEVSGGGFPGWLQRVDG-ILRTSDEAYLKATDNYASNIAATIAKA--QITNGGPIILYQPE 158 (971)
T ss_dssp HHHHHHTCEEEEECCSCCCTTBGGGGCCGGGGGCSS-CTTSSCHHHHHHHHHHHHHHHHHHHHT--BGGGTSSEEEECCS
T ss_pred HHHHHCCCEEEEECCCCCCCEECCCCCCEEECCCCC-EECCCCHHHHHHHHHHHHHHHHHHHHH--HHCCCCCEEEEECC
T ss_conf 999985998997058742114447873156035688-754799899999999999999998643--20179977787326
Q ss_pred CCCCCCC-CCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCC----CCCC---CCCCCC------CCCCCCCC-------C
Q ss_conf 6665321-356889768999999998833996341880578----9994---222367------88766877-------8
Q 003612 185 NEYGMVE-HSFLEKGPPYVRWAAKLAVDLQTGVPWVMCKQD----DAPD---PVINAC------NGRQCGET-------F 243 (807)
Q Consensus 185 NEyg~~~-~~~~~~~~~y~~~l~~~~~~~g~~vp~~~~~~~----~~~~---~~~~~~------ng~~~~~~-------~ 243 (807)
||||+.. ++++..+++||+|+++++|++|++||++||++. ..+. +.++.+ .+++|.+. |
T Consensus 159 NEyg~~~~~~~~~~~~~Y~~~l~~~~r~~g~~vPl~tn~~~~~~~~~~~~~~g~ldv~~~D~Yp~g~~~~~~~~~~~~~~ 238 (971)
T 1tg7_A 159 NEYSGACCGYNGFPDGSYMQYIEDHARDAGIVVPFISNDAWAAGHNAPGTGAGAVDIYGHDSYPLGFDCANPSTWPSGNL 238 (971)
T ss_dssp SCCCCBCTTCCCCSCHHHHHHHHHHHHHTTCCSCBBCCBSSSSCTTCTTSCTTCCSBCEEEECTTCSCCSCTTCCCTTCS
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCC
T ss_conf 65676666653166999999999999970998339995475445546543357324875377766565677554200000
Q ss_pred CC-------CCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHH-----HHHHHHCCCEEEEEEEEECCCCCCCCCCC
Q ss_conf 89-------9999999421013553234458976447988999999-----99999418804668786526796887887
Q 003612 244 AG-------PNSPDKPAIWTENWTSFYQVYGDEARIRSAEDIAYHV-----ALFIAKMKGSYVNYYMYHGGTNFGRTASA 311 (807)
Q Consensus 244 ~~-------~~~~~~P~~~~E~~~Gwf~~WG~~~~~~~~~~~~~~~-----~~~~~~~g~s~~n~YM~hGGTNfG~~~g~ 311 (807)
.. ..+|++|.|++|+|+|||++||+.++++++++.+..+ ..+++. |++++||||||||||||+++|+
T Consensus 239 ~~~~~d~~r~~~p~~P~~~~E~~~Gw~~~Wg~~~~~~~~~~~~~~~~~~~~~~~la~-Ga~~vnyYm~~GGTNfG~~~g~ 317 (971)
T 1tg7_A 239 PTYFHTSHEQQSPSTPYSLVEFQGGAFDPWGGVGFAKCAALLNHEFERVFYKNDFSF-GVAFLNLYMIFGGTNWGNLGHP 317 (971)
T ss_dssp CCCHHHHHHHHCTTSCCEEEEEESSCCCCTTCCCHHHHHHHTSHHHHHHHHHHHHTT-TCSEEEEECSBCCBCCTTCBCT
T ss_pred CHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHC-CCCEEEEEEEECCCCCCCCCCC
T ss_conf 156999864238999979981378575677887656663557689999999999977-9978999971043577656787
Q ss_pred CCCCCCCCCCCCCCCCCCCC-CHHHHHHHHHHHHHHHCCCCCCCCCCCC--------------CCCC--CCEEEEE----
Q ss_conf 53224567898787798888-0279999999998641266657763113--------------6787--5300131----
Q 003612 312 YVLTGYYDQAPLDEYGLLRQ-PKWGHLKELHSAVKLCLKPMLSGVLVSM--------------NFSK--LQEAFIF---- 370 (807)
Q Consensus 312 ~~~TSYDy~Api~E~G~~~t-~Ky~~lr~l~~~~~~~~~~~~~~~~~~~--------------~~~~--~~~~~~y---- 370 (807)
.++|||||+|||+|+|++ + |||.++|+++.+++.+++ ++.++|... .+.+ ..++..|
T Consensus 318 ~~~tSYDy~Apl~E~G~~-t~~ky~elr~l~~~l~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~a~f~~~r~ 395 (971)
T 1tg7_A 318 GGYTSYDYGSAISESRNI-TREKYSELKLLGNFAKVSPG-YLVANPGDLSTSTYTNTADLTVTPLLGSNSSASSFFVIRH 395 (971)
T ss_dssp TSCSBCCTTCSBCTTCCC-CSHHHHHHHHHHHHHHTCHH-HHTSEECCCBSSSSBSCTTEEEEEEECSSTTSCEEEEEEE
T ss_pred CCCEEECCCCEECCCCCC-CHHHHHHHHHHHHHHHHCHH-HHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEEEEEEEC
T ss_conf 730052347560767883-64689999999999986757-6515876676544467874389994347898518999965
Q ss_pred ------------------------------------------------------CC----C-------------------
Q ss_conf ------------------------------------------------------26----8-------------------
Q 003612 371 ------------------------------------------------------QG----S------------------- 373 (807)
Q Consensus 371 ------------------------------------------------------~~----~------------------- 373 (807)
.+ .
T Consensus 396 ~~~~~~~~~~~~l~v~ts~g~~~iP~~~g~i~l~gr~ski~~~d~~~g~~~l~ysTa~~~t~~~~~~~~v~vly~~~g~~ 475 (971)
T 1tg7_A 396 SDYSSQASVEYKLTVPTSAGNLTIPQLGGSLTLSGRDSKIHVTDYDVAGTNILYSTAEVFTWKKFNNEKVLVLYGGPGEH 475 (971)
T ss_dssp SSTTCCCCEEECEEEEETTEEEEECSSSSCEEECTTCCEEEEEEEEETTEEEEEESSEEEEEEEETTEEEEEEEECTTCE
T ss_pred CCCCCCCCEEEEEEEECCCCCEECCCCCCCEEECCCCEEEEECCCCCCCEEEEEEEEEEEEEEEECCCEEEEEECCCCCC
T ss_conf 67877774489999755898776167787367889730899534324876899862004798887890499998489973
Q ss_pred --------------CCC-C---------EEEECCCCCCCEE-EEECCC-----------EECCCC---------------
Q ss_conf --------------420-0---------1210257788607-986560-----------110598---------------
Q 003612 374 --------------SEC-A---------AFLVNKDKRNNAT-VYFSNL-----------MYELPP--------------- 402 (807)
Q Consensus 374 --------------~~~-~---------~fl~~~~~~~~~~-v~~~~~-----------~~~~~~--------------- 402 (807)
..| . .|+.|.......+ |++++. .|-+|.
T Consensus 476 ~e~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~lld~~~A~~~w~p~~~~~~~~~~~~~~~~ 555 (971)
T 1tg7_A 476 HEFAVSGASSSSVVEGSSSGISSKKVGKALVVAWDVSTARRIVQVGSLKVFLLDRNSAYNYWVPQVPTKGTAPGYSNQET 555 (971)
T ss_dssp EEEEEETCCCCEEEESCCTTCEEEEETTEEEEEEECCSSCEEEEETTEEEEEEEHHHHTTEECCCCCSSSSCCCCCSHHH
T ss_pred EEEEEECCCCEEEECCCCCCEEEECCCCEEEEEECCCCCEEEEEECCEEEEEECHHHHHEEECCCCCCCCCCCCCCCCCC
T ss_conf 37999537620350576653058436854999504688548999799899996457641086554467666676566556
Q ss_pred -------------CCCCC-------------------C--C-CCCCCCCCCCCCCC------------------------
Q ss_conf -------------63000-------------------4--6-77621123532342------------------------
Q 003612 403 -------------LSISI-------------------L--P-DCKTVAFNTAKLDS------------------------ 423 (807)
Q Consensus 403 -------------~~v~i-------------------~--~-~~~~~~~~t~~v~~------------------------ 423 (807)
|+++| + | +|+++.||+++|..
T Consensus 556 ~~~~v~v~g~ylvrsasi~~~~l~l~gd~~~~t~~ev~~~p~~~~~v~~Ng~~v~~~~~~~g~~~~~~~~~~~~~~~P~l 635 (971)
T 1tg7_A 556 TASSIIVKAGYLVRSAYLDGNDLHIQADFNATTPIEVVGAPSGAKNLVINGKKTQTKVDKNGIWSASVAYTAPKVQLPSL 635 (971)
T ss_dssp HHTCCEEECSSEEEEEEEETTEEEEEEEBSSCEEEEEESCCTTCCEEEETTEEECCEECTTCCEEEEECCCCCCCCCCCG
T ss_pred CCCEEEEECCCEEEEEEEECCEEEEEEECCCCCEEEEEECCCCCCEEEECCEECEEEECCCCCEEEECCCCCCCCCCCCC
T ss_conf 78518986670789999809889998524888227998568886689999988405774686188754777654246566
Q ss_pred -HHHHHHCCC---CCCCCCCCCCCCCCHHHHCCC----C----CCCCCC------EEEEEEEECCCCCCCCEEEEC---C
Q ss_conf -001100023---445576554342201432037----7----888872------899999707999996316947---7
Q 003612 424 -VEQWEEYKE---AIPTYDETSLRANFLLEQMNT----T----KDASDY------LWYNFRFKHDPSDSESVLKVS---S 482 (807)
Q Consensus 424 -~~~w~~~~e---~~~~~~~~~~~~p~~~Eql~~----t----~d~~Gy------ilY~t~v~~~~~~~~~~L~i~---~ 482 (807)
.+.|+...+ ..+.+.+...+.....|+.+. + .+.++| +|||++|.++. ....|.+. +
T Consensus 636 ~~l~Wk~~~~~pe~~~~~dDs~W~~~~l~~~~n~~~p~t~p~~~~~sdYGf~~G~lwYR~~F~~~~--~~~~L~~~~~gG 713 (971)
T 1tg7_A 636 KSLKWKSVDTLPEAKNTYDDSAWTSADHAYTNNSAHSLQTPTSLFASDYGYHTGALLFRGHFTANG--KEKTFFVQTKGG 713 (971)
T ss_dssp GGSCCEEEESCGGGSTTCCCTTSEECCCSSCCCTTCCCSSSSCCBGGGGTCCSSCEEEEEEEECCS--CCCEEEEEEECS
T ss_pred CCCCEEEECCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCC--CCEEEEEEECCC
T ss_conf 778828957784346888877765898702134347788776677776686674299998998788--603899971576
Q ss_pred CCEEEEEEECCEEEEEEECCCCC--CCEEEEEEEEECC-CCCEEEEEEECCCCCCC---CCCCCCCCCCEEEEEECCC-C
Q ss_conf 23299999989799999634678--5127984564127-86479999941786564---2343442241437998783-1
Q 003612 483 LGHVLHAFINGEFVGSAHGKHSD--KSFTLEKMVHLIN-GTNNVSLLSVMVGLPDS---GAYLERRVAGLRNVSIQGA-K 555 (807)
Q Consensus 483 ~~D~a~Vfvng~~vG~~~~~~~~--~~~~~~~~~~l~~-g~~~L~ILven~Gr~N~---G~~~~~~~kGI~gV~l~g~-~ 555 (807)
+++.++|||||+++|+..+.... .++.+++ ..|+. +.|+|+|||+|+|+.|+ |+.++++++||.+|.|.+. .
T Consensus 714 ~~~~~~VwvNG~~lGs~~g~~~~~~~~~~~~l-~~L~~gg~NvI~Vlvdn~G~~nsWy~G~~~~~~~~GI~~v~L~g~~~ 792 (971)
T 1tg7_A 714 TAYGHSIWINETYVGSWAGTSINDNNNATYTL-PTLQSGKNYVITVVIDNMGLDEDWTIGSEDMKNPRGIIQYSLSGQEA 792 (971)
T ss_dssp TTCCEEEEETTEEEEEECCCTTCSEEEEEEEC-CCCCTTCEEEEEEEECCCCCCCCCSBTCCGGGCCCEEEEEEETTSCG
T ss_pred CCCEEEEEECCEEEEEEECCCCCCCCCEEEEE-EEECCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
T ss_conf 54239999999997655467875567668998-67447995189999936777766566733012687624889964579
Q ss_pred CC--CCCCCCCC--EE---------ECCCCCCHHHCCCCCCCCCCCCCCCCC-C--CCCCCEEEEEEEE--CCCCCC-CE
Q ss_conf 43--11577861--69---------403741000000268997545655898-8--9889439999997--899999-61
Q 003612 556 EL--KDFSSFSW--GY---------QVGLLGEKLQIFTDYGSRIVPWSRYGS-S--THQPLTWYKTVFD--APTGSD-PV 616 (807)
Q Consensus 556 ~~--~~L~~~~W--~~---------~~~l~~e~~~~~~~~~~~~~~w~~~~~-~--~~~~~~~yk~~F~--~~~~~d-~~ 616 (807)
+. .+|+++.| .| +.+|.+|+.+++++. .+...|.+.+. . ...+++|||++|+ +|++.| |+
T Consensus 793 ~~~~w~l~g~~~ge~~~D~~RgplN~~GL~gE~~~w~~p~-~~~~~W~~~sp~~gl~~~Gv~wyr~~f~L~~p~g~d~pl 871 (971)
T 1tg7_A 793 SAISWKLTGNLGGENYRDTVRGPLNEGGLYAERQGFHQPQ-PPTQKWDSSSPFTGLTKPGIRFYSTSFDLDLPSGYDIPL 871 (971)
T ss_dssp GGCEEEEESSTTTTSCSCTTTCSSSCCSSHHHHTTTTSSS-CCCTTSBCCCTTTCBSSSEEEEEEEEEECCCCTTEECCE
T ss_pred CCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCCEE
T ss_conf 8744998505566555543345445444434222532799-983466487876788888508999997456877898308
Q ss_pred EEEECCCC------EEEEEECCEEEEECCCCCCCCCCCCCCEEECCCCCCC-CCCCCEEEE----EEECCCCCCEEEEEE
Q ss_conf 89647882------1999996832101121355899998301103575433-454427999----993389999069972
Q 003612 617 AINLISMG------KGEAWVNGQSIGRYWVSFLTPQGTPSQSWYHIPRSFL-KPTGNLLVL----LEEENGYPPGISIDT 685 (807)
Q Consensus 617 fLd~~g~g------KG~vwVNG~nlGRYW~~~~~~~gGPQqtlYhVP~~~L-k~g~N~ivi----fE~~~~~p~~i~~~~ 685 (807)
.|+|..|+ ||++||||++|||||+.+ +||+++. ||+.|| |+|+|+|+| ||+.|++|..+.|++
T Consensus 872 ~L~lg~~~~~~~~~~~~~~VNG~~iGry~~~~-----~pqr~y~-VP~giLn~~G~N~i~vrv~~~~~~Gg~~~~i~l~~ 945 (971)
T 1tg7_A 872 YFNFGNSTSTPAAYRVQLYVNGYQYGKYVNNI-----GPQTSFP-VPEGILNYHGTNWLALSLWAQEDNGAKLDSFELIN 945 (971)
T ss_dssp EEEECCCCSSCCCEEEEEEETTEEEEEEETTT-----CSCCEEE-ECBTTBCTTSEEEEEEEEEECSTTCBCCSCEEEEE
T ss_pred EEECCCCCCCCCCCEEEEEECCEEEEEECCCC-----CCCEEEE-CCHHHHCCCCCCEEEEEEECCCCCCCCCCCEEEEE
T ss_conf 99857888777563289999999874012788-----7877997-79799386996389999862777789865069997
Q ss_pred E
Q ss_conf 1
Q 003612 686 V 686 (807)
Q Consensus 686 ~ 686 (807)
+
T Consensus 946 ~ 946 (971)
T 1tg7_A 946 T 946 (971)
T ss_dssp C
T ss_pred C
T ss_conf 5
No 5
>3og2_A Beta-galactosidase; TIM barrel domain, glycoside hydrolase, family 35, glycoprot hydrolase; HET: NAG BMA MAN GLC; 1.20A {Trichoderma reesei} PDB: 3ogr_A* 3ogs_A* 3ogv_A*
Probab=1.00 E-value=1 Score=908.69 Aligned_cols=645 Identities=22% Similarity=0.335 Sum_probs=462.5
Q ss_pred CCCCCCCEEEEECCEEEECCEEEEEEEEEEECCCCC-HHCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEECCCCHHH
Q ss_conf 999997339980781999798979999985099999-0109999999998699889982118767898970100492029
Q 003612 22 GGGGGGNNVTYDGRSLIINGHRKILFSGSIHYPRST-PQMWPRLIAKAKEGGLDVVQTLVFWNLHEPQPGQFDFSGRRDL 100 (807)
Q Consensus 22 ~~~~~~~~v~~~~~~f~l~G~~~~~~~g~~hy~r~~-~~~W~~~l~~~ka~G~N~V~~yv~W~~hEp~~G~~df~g~~dl 100 (807)
...+.+..|++|+++|++||||++++||++||+|+| |++|+++|+|||++|+|+|++|||||+|||+||+|||+|++||
T Consensus 18 ~~~~~~~~v~~d~~~~~idG~p~~i~sGeiHy~R~p~pe~W~d~l~kmKa~GlNtV~tYV~Wn~hEP~eG~fdFsg~~dL 97 (1003)
T 3og2_A 18 AKGPLQNIVTWDEHSLFVHGERVVIFSGEVHPFRLPVPSLYLDVFHKIKALGFNTVSFYVDWALLEGKPGRFRADGIFSL 97 (1003)
T ss_dssp CCSCSSSSEEECSSCEEETTEEECEEEEEECGGGCCCGGGHHHHHHHHHTTTCCEEEEECCHHHHCSBTTBCCCCGGGCS
T ss_pred CCCCCCCEEEECCCEEEECCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCEECCCCHHHH
T ss_conf 44677616998188699999798999998887559988999999999997399889985164434897887355555559
Q ss_pred HHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEE
Q ss_conf 99999999869689984177444333578878534668996446898023999999999999999863321136996485
Q 003612 101 VRFIKEVQAQGLYVCLRIGPFIEGEWGYGGLPFWLHDVPGIVFRSDNEPFKFHMKRYATMIVNMMKAARLYASQGGPIIL 180 (807)
Q Consensus 101 ~~fl~~a~~~GL~Vilr~GPyi~aE~~~GG~P~Wl~~~p~~~~R~~d~~~~~~~~~~~~~i~~~i~~~~~~~~~gg~II~ 180 (807)
++||++|+|+||+|||||||||||||++||+|.||.+.|+ .+|++||.|++++++|+++|++++++ +++++||||||
T Consensus 98 ~~fl~la~e~GL~VILRpGPYi~aEw~~GG~P~WL~~~~~-~lRt~~p~yl~~~~~~~~~l~~~~~~--~~~~~GGpII~ 174 (1003)
T 3og2_A 98 EPFFEAATKAGIYLLARPGPYINAEVSGGGFPGWLQRVKG-KLRTDAPDYLHATDNYVAHIASIIAK--AQITNGGPVIL 174 (1003)
T ss_dssp HHHHHHHHHHTCEEEEEEESCCCTTBGGGGCCGGGGGCCS-CTTSCCHHHHHHHHHHHHHHHHHHHH--TBGGGTSSEEE
T ss_pred HHHHHHHHHCCCEEEECCCCCEEEECCCCCCCCHHCCCCC-EECCCCHHHHHHHHHHHHHHHHHHHH--HHCCCCCCEEE
T ss_conf 9999999985998993278633335278876621025997-00579989999999999999999877--64237997899
Q ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCC----CCCCCCCCC---------CCCCCCCCC--CC-
Q ss_conf 16346665321356889768999999998833996341880578----999422236---------788766877--88-
Q 003612 181 SQIENEYGMVEHSFLEKGPPYVRWAAKLAVDLQTGVPWVMCKQD----DAPDPVINA---------CNGRQCGET--FA- 244 (807)
Q Consensus 181 ~QieNEyg~~~~~~~~~~~~y~~~l~~~~~~~g~~vp~~~~~~~----~~~~~~~~~---------~ng~~~~~~--~~- 244 (807)
||||||||++...++.++++||+||+++++++|++|||+||++. ..++.++.+ +++++|... |.
T Consensus 175 ~QVENEYG~~~~~~~~~d~~Ym~~L~~~~~~~Gi~VPl~t~d~~~~~~~~~g~~~g~vdiyg~d~yp~g~~c~~~~~w~~ 254 (1003)
T 3og2_A 175 YQPENEYSGAAEGVLFPNKPYMQYVIDQARNAGIIVPLINNDAFPGGTGAPGTGLGSVDIYGHDGYPLGFDCAHPSAWPD 254 (1003)
T ss_dssp EEESSCCCCBCTTSCSSCHHHHHHHHHHHHHTTCCSCBBCCBSSSCCTTCTTSCTTCCSBCEEEECTTCSCTTSTTCCCT
T ss_pred EECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCC
T ss_conf 97245457533445677789999999999974993679976885224657776555133302456667430368765555
Q ss_pred --C---------CCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHH-----HHHHHHCCCEEEEEEEEECCCCCCCC
Q ss_conf --9---------9999999421013553234458976447988999999-----99999418804668786526796887
Q 003612 245 --G---------PNSPDKPAIWTENWTSFYQVYGDEARIRSAEDIAYHV-----ALFIAKMKGSYVNYYMYHGGTNFGRT 308 (807)
Q Consensus 245 --~---------~~~~~~P~~~~E~~~Gwf~~WG~~~~~~~~~~~~~~~-----~~~~~~~g~s~~n~YM~hGGTNfG~~ 308 (807)
. ..+|++|+||+|||+||||+||++++++++++++..+ +++++. |++++||||||||||||+|
T Consensus 255 ~~~~~~~~~~~~~~~p~~P~~~~Ef~~GWfd~WG~~~~~~~~~~~~~~~~~~~~~~~l~~-G~s~vN~YM~hGGTNFG~~ 333 (1003)
T 3og2_A 255 NGLPTTWRQDHLNISPSTPFSLVEFQGGAFDPFGGWGFEQCSALVNHEFERVFYKNNMAA-GVTIFNIYMTFGGTNWGNL 333 (1003)
T ss_dssp TCSCCCHHHHHHHHCTTSCCEEEEEESSCCCCTTCCCHHHHHHHSSHHHHHHHHHHHHHT-TCSEEEEEEEECCBCCTTC
T ss_pred CCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC-CCCEEEEEEECCCCCCCCC
T ss_conf 541577998765128999828870014333435888777773340599999999998856-8855788872164686535
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCC---CCCCCEEEEECC---CCCCCEEEEC
Q ss_conf 8875322456789878779888802799999999986412666577631136---787530013126---8420012102
Q 003612 309 ASAYVLTGYYDQAPLDEYGLLRQPKWGHLKELHSAVKLCLKPMLSGVLVSMN---FSKLQEAFIFQG---SSECAAFLVN 382 (807)
Q Consensus 309 ~g~~~~TSYDy~Api~E~G~~~t~Ky~~lr~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~y~~---~~~~~~fl~~ 382 (807)
+++.++|||||||||+|+|+++||||.++|.+|.|++.+ ++++.++|...+ ........++.. ....|.|+++
T Consensus 334 ~~~~~~TSYDYdAPL~E~G~~~t~Ky~~lK~l~~fl~~~-~~~l~~~~~~~~~~~~~~~~~i~~t~lr~~~~~~Fyvvrh 412 (1003)
T 3og2_A 334 GHPGGYTSYDYGASIREDRRIDREKYSELKLQGQFLKVS-PGYITATPENATQGVYSDSQNIVITPLLAKESGDFFVVRH 412 (1003)
T ss_dssp BCTTSCSBCCTTCSBCTTCCCCSHHHHHHHHHHHHHHTC-THHHHSEECCCBSSSSSSCSSEEEEEEECSSSCEEEEEEE
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC-HHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEC
T ss_conf 799841334678844646775834789999999987538-3764556465887613489863899986489855999981
Q ss_pred CCCCCCE----EEEEC--CCEECCCC---------CCCCCCC-C----CCCCCCCCCCCCC-------------------
Q ss_conf 5778860----79865--60110598---------6300046-7----7621123532342-------------------
Q 003612 383 KDKRNNA----TVYFS--NLMYELPP---------LSISILP-D----CKTVAFNTAKLDS------------------- 423 (807)
Q Consensus 383 ~~~~~~~----~v~~~--~~~~~~~~---------~~v~i~~-~----~~~~~~~t~~v~~------------------- 423 (807)
.+..+.. ++.++ ...+++|. +...|++ | ..+++|+|+++.+
T Consensus 413 ~~~~s~~~~~~~l~l~ts~G~~tiP~~~g~ltL~grdskI~vtdy~~g~~~L~YSTAevlT~~~~~~~~vlvlyg~~Ge~ 492 (1003)
T 3og2_A 413 ANYSSTDTASYTVKLPTSAGDLTIPQLGGSLTLTGRDSKIHVTDYPVGKFTLLYSTAEIFTWNEFAEKTVLVLYGGAQEL 492 (1003)
T ss_dssp SSTTCCSCEEECEEECCTTCCEEECTTSCCEEECTTCEEEEEEEEEETTEEEEEESSEEEEEEECSSCEEEEEEECTTCE
T ss_pred CCCCCCCCCEEEEEECCCCCCEEECCCCCEEEECCCCCEEEEECCCCCCEEEEEECCCEEEEEEECCEEEEEEECCCCCC
T ss_conf 57887776128999427887678678897278888655598501324884899972411788998998899997889983
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003612 424 -------------------------------------------------------------------------------- 423 (807)
Q Consensus 424 -------------------------------------------------------------------------------- 423 (807)
T Consensus 493 ~E~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~~l~v~l~dr~~A~~~W~~~~~~~~~~~~~ 572 (1003)
T 3og2_A 493 HEFAVKNPFGSSKTAKAKKIEGSNVTIHTTSNLTVVLQWTASSARQVVQLGSLVIYMVDRNSAYNYWVPTLPGSGKQSAY 572 (1003)
T ss_dssp EEEEESCCSTTCSSCCCEEEECSSCEEEECTTCCEEEEEECCSSCEEEEETTEEEEEEEHHHHTTEECCBCCCSSTTGGG
T ss_pred EEEEEECCCCCCCCCCCCEECCCCEEEEECCCCEEEEEEECCCCEEEEEECCEEEEEEEHHHHHHHCCCCCCCCCCCCCC
T ss_conf 48999334444567887364278705874689589998853796499997999999970688764135534688764543
Q ss_pred --------------------------------------------------------------------------------
Q ss_conf --------------------------------------------------------------------------------
Q 003612 424 -------------------------------------------------------------------------------- 423 (807)
Q Consensus 424 -------------------------------------------------------------------------------- 423 (807)
T Consensus 573 ~~~~~~~~~vlV~g~yLvRsA~~~g~~l~l~GD~~~tt~lev~~~p~~v~~v~wNG~~~~~~~~~~g~~~~~~~~~~~~i 652 (1003)
T 3og2_A 573 GSSLMNPDSVIINGGYLIRSVAIKGNALSVQADFNVTTPLEIIGIPKGISKLAVNGKELGYSVSELGDWIAHPAIEIPHV 652 (1003)
T ss_dssp CSCSSSCCBCEEECCSEEEEEEEETTEEEEEEEBSSCCCEEEESCCTTCCEEEETTEEECCEECTTSCEEECCCCCCCCC
T ss_pred CCCCCCCCCEEEECCEEEEEEEECCCEEEEEEECCCCCEEEEEECCCCCCEEEECCEECEEEECCCCCEEEEECCCCCCC
T ss_conf 45678887289978837999897199999984358981379993687754899999985148637875799832778765
Q ss_pred ----H--HHHHH---CCCCCCCCCCC--------CC-------CCC--CHHHHCCCCCCCCCCEEEEEEEECCCCCCCCE
Q ss_conf ----0--01100---02344557655--------43-------422--01432037788887289999970799999631
Q 003612 424 ----V--EQWEE---YKEAIPTYDET--------SL-------RAN--FLLEQMNTTKDASDYLWYNFRFKHDPSDSESV 477 (807)
Q Consensus 424 ----~--~~w~~---~~e~~~~~~~~--------~~-------~~p--~~~Eql~~t~d~~GyilY~t~v~~~~~~~~~~ 477 (807)
+ +.|.. ++|..+.+.++ +. ..| +...+++- ++|.+|||.++..........
T Consensus 653 ~lP~L~~l~Wk~~dslPE~~~~ydDs~W~~A~~~~t~n~~~p~~~p~~Lya~dYGf---h~G~~wYRG~F~a~~~~~~v~ 729 (1003)
T 3og2_A 653 QVPELTKLKWYKVDSLPEIRSNYDDSRWPLANLRTSNNTYAPLKTPVSLYGSDYGF---HAGTLLFRGRFTARTARQQLF 729 (1003)
T ss_dssp CCCCGGGSCCEEEESCGGGSTTCCCTTSCBCCCSCCCCSSSCCCSSSCCBGGGGTC---CSSCEEEEEEEECSSSSEEEE
T ss_pred CCCCCCCCCEEECCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCEEECCCCCC---CCCCEEEEEEEECCCCCEEEE
T ss_conf 48877888714227886568999843260667656568556789984757645676---448789861897788714899
Q ss_pred EEECC-CCEEEEEEECCEEEEEEECCCCC--CCEEEEEEEEECCC-CCEEEEEEECCCCC-CC--CCCCCCCCCCEEEEE
Q ss_conf 69477-23299999989799999634678--51279845641278-64799999417865-64--234344224143799
Q 003612 478 LKVSS-LGHVLHAFINGEFVGSAHGKHSD--KSFTLEKMVHLING-TNNVSLLSVMVGLP-DS--GAYLERRVAGLRNVS 550 (807)
Q Consensus 478 L~i~~-~~D~a~Vfvng~~vG~~~~~~~~--~~~~~~~~~~l~~g-~~~L~ILven~Gr~-N~--G~~~~~~~kGI~gV~ 550 (807)
|.+++ .+-.+.|||||+|+|+..+.... .++++.++. |+.| +|+|+|+|+|||.. ++ |..--+.++||++..
T Consensus 730 L~~~GG~af~~sVWLNG~flGs~~g~g~~~~~~~~~~lP~-L~~g~~NVLtV~vDn~G~d~~w~~G~d~~k~PRGi~~~~ 808 (1003)
T 3og2_A 730 LSTQGGSAFASSVWLNDRFIGSFTGFDAASAANSSYTLDR-LVRGRRYILTVVVDSTGLDENWTTGDDSMKAPRGILDYA 808 (1003)
T ss_dssp EEEECSTTCCEEEEETTEEEEEECCCTTCSEEEEEEEECS-CCTTCEEEEEEEECCCCCCCCCSBTCCGGGCCCEEEEEE
T ss_pred EEECCCCCCCCEEEECCEEECCCCCCCCCCCCCEEEECCC-CCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEE
T ss_conf 9981512434489999978225547886565666997875-567996089999928876556466755444887500005
Q ss_pred ECCCCCC-CCCCCCCCEEEC------------------CCCCCHHHCCCCCCCCCCCCCCC--------CC---CCCCCC
Q ss_conf 8783143-115778616940------------------37410000002689975456558--------98---898894
Q 003612 551 IQGAKEL-KDFSSFSWGYQV------------------GLLGEKLQIFTDYGSRIVPWSRY--------GS---STHQPL 600 (807)
Q Consensus 551 l~g~~~~-~~L~~~~W~~~~------------------~l~~e~~~~~~~~~~~~~~w~~~--------~~---~~~~~~ 600 (807)
|.+.... +++ .|+.+- +|.+|+.+.|+|. .+...|.+. +. ....+.
T Consensus 809 l~g~~~~~~~~---~Wki~Gn~GGe~~~D~vRGplNeGGly~ER~GwHLPg-~~~~~W~~~~~~~~~~~sp~~g~~~~Gv 884 (1003)
T 3og2_A 809 LTSSSGANVSI---SWKLTGNLGGEDYRDVFRGPLNEGGLFFERQGFHLPS-PPLSDFTHGPSSSSSSSSPLDGIAHAGI 884 (1003)
T ss_dssp EEETTSCBCCC---EEEEESSTTTTSCSCTTTCSSSCCSSHHHHHTTTSSS-CCGGGSBCCCTTSTTCCCTTTCBSSSEE
T ss_pred CCCCCCCCCCC---EEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCE
T ss_conf 23788776630---5898413588656786656655886557741323898-8943233244454456784557788845
Q ss_pred EEEEEEEECCCC---CC-CEEEEECC-----CCEEEEEECCEEEEECCCCCCCCCCCCCCEEECCCCCCCC-CCCCEEEE
Q ss_conf 399999978999---99-61896478-----8219999968321011213558999983011035754334-54427999
Q 003612 601 TWYKTVFDAPTG---SD-PVAINLIS-----MGKGEAWVNGQSIGRYWVSFLTPQGTPSQSWYHIPRSFLK-PTGNLLVL 670 (807)
Q Consensus 601 ~~yk~~F~~~~~---~d-~~fLd~~g-----~gKG~vwVNG~nlGRYW~~~~~~~gGPQqtlYhVP~~~Lk-~g~N~ivi 670 (807)
+||+++|+++-+ .| |+.+.+.. --|-++||||+++|||-+++ |||.++. ||..+|+ .|+|+|.|
T Consensus 885 ~fyrt~f~LdlP~~g~Dvpl~~~f~~~~~~~~yRa~lfVNG~q~Gkyv~~i-----GPQt~Fp-vP~GILn~~G~Ntial 958 (1003)
T 3og2_A 885 AFYAAKLPLHLPAQEYDIPLSFVFDNATAAAPYRALLYVNGFQYGKYVSNI-----GPQTEFP-VPEGILDYNGDNWIGV 958 (1003)
T ss_dssp EEEEEEEEEECCTTTEECCEEEEECCCSSCCCEEEEEEETTEEEEEEETTT-----CCCCEEE-ECBTTBCTEEEEEEEE
T ss_pred EEEEEEEECCCCCCCCCEEEEEEECCCCCCCCEEEEEEEECEEEEEECCCC-----CCCCEEC-CCCCCCCCCCCCEEEE
T ss_conf 799878526899656710389997779887635899997020210221787-----8860305-9920112799626999
Q ss_pred E----EECCCCCCEEEEEE
Q ss_conf 9----93389999069972
Q 003612 671 L----EEENGYPPGISIDT 685 (807)
Q Consensus 671 f----E~~~~~p~~i~~~~ 685 (807)
- |+.|+....++|+.
T Consensus 959 alWa~~~~ga~~~~~~L~~ 977 (1003)
T 3og2_A 959 ALWALESRGAKVPGLALKS 977 (1003)
T ss_dssp EEEECSTTCBCCSCEEEEE
T ss_pred EEEECCCCCCCCCCEEEEE
T ss_conf 9984268888777159997
No 6
>3u7v_A Beta-galactosidase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel, glyco_hydro_42; HET: MSE; 1.80A {Caulobacter crescentus}
Probab=1.00 E-value=1 Score=302.84 Aligned_cols=170 Identities=19% Similarity=0.291 Sum_probs=143.8
Q ss_pred CCEEEEE--CCEEEECCEEEEEEEEEEECCCCCHHCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEECCCCHHHHHHH
Q ss_conf 7339980--78199979897999998509999901099999999986998899821187678989701004920299999
Q 003612 27 GNNVTYD--GRSLIINGHRKILFSGSIHYPRSTPQMWPRLIAKAKEGGLDVVQTLVFWNLHEPQPGQFDFSGRRDLVRFI 104 (807)
Q Consensus 27 ~~~v~~~--~~~f~l~G~~~~~~~g~~hy~r~~~~~W~~~l~~~ka~G~N~V~~yv~W~~hEp~~G~~df~g~~dl~~fl 104 (807)
...|++. +.+|++||||++++||++|+++..+..+++++++||++|+|+|++||+|+.|||+||+|||++ |++|+
T Consensus 39 ~p~~~i~~~~~~f~lnGkPf~i~gg~~H~~~~y~r~~~~~W~~mKa~G~NtVr~~V~W~~hEP~~G~yDF~~---LD~~l 115 (552)
T 3u7v_A 39 MPQLVTKDGRHALMVDGAPFLMLAAQVNNSSAWPSQMAKVWPAIEKVGANTVQVPIAWEQIEPVEGQFDFSY---LDLLL 115 (552)
T ss_dssp CCEEEEETTEEEEEETTEEECEEEEECCTTCCSGGGHHHHHHHHHHHTCSEEEEEEEHHHHCSBTTBCCCHH---HHHHH
T ss_pred CCEEEEECCEEEEEECCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHCCCCCCCCCCHHH---HHHHH
T ss_conf 982999789688989998999998870798886331199999999809988999862432489898468064---99999
Q ss_pred HHHHHCCCEEEEEECCCCCCCCCCCC---CCCCCCCCCCC--CCCCCC-----------HHHHHHHHHHHHHHHHHHHHC
Q ss_conf 99998696899841774443335788---78534668996--446898-----------023999999999999999863
Q 003612 105 KEVQAQGLYVCLRIGPFIEGEWGYGG---LPFWLHDVPGI--VFRSDN-----------EPFKFHMKRYATMIVNMMKAA 168 (807)
Q Consensus 105 ~~a~~~GL~Vilr~GPyi~aE~~~GG---~P~Wl~~~p~~--~~R~~d-----------~~~~~~~~~~~~~i~~~i~~~ 168 (807)
++|+++||+|||| +|+||++|| +|.||.++|++ ++|+.| +.|++++++|+++|+++|+++
T Consensus 116 dla~e~GL~VIL~----i~aeW~~ggta~~P~WL~~d~~~~P~vrt~dG~~~~~~sp~~p~yl~a~r~~~~~l~~~La~r 191 (552)
T 3u7v_A 116 EQARERKVRLVLL----WFGTWKNSSPSYAPEWVKLDDKRFPRLIKDDGERSYSMSPLAKSTLDADRKAFVALMTHLKAK 191 (552)
T ss_dssp HHHHHTTCEEEEE----EEEEEETTBCTTSCHHHHTCTTTSCEEECTTSCEEEEECTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCEEEEE----ECCCCCCCCCCCCCCHHHCCCCCCCEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 9999879999998----412014688767880565176657524889996751479886789999999999999999997
Q ss_pred CCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 3211369964851634666532135688976899999999883
Q 003612 169 RLYASQGGPIILSQIENEYGMVEHSFLEKGPPYVRWAAKLAVD 211 (807)
Q Consensus 169 ~~~~~~gg~II~~QieNEyg~~~~~~~~~~~~y~~~l~~~~~~ 211 (807)
+.+||+|||||||||||++. ++..|++.+++.+|.
T Consensus 192 ---~~~~p~VI~wQIeNEyG~~g-----~~~~Y~~~~~~aFR~ 226 (552)
T 3u7v_A 192 ---DAAQKTVIMVQVENETGTYG-----SVRDFGPAAQKVFNG 226 (552)
T ss_dssp ---HTTTCCEEEEEEEESCSBSS-----CSSCCSHHHHHHHHS
T ss_pred ---HCCCCCEEEEEECCCCCCCC-----CCCHHHHHHHHHHHH
T ss_conf ---18999489999615677777-----732151999999998
No 7
>1vem_A Beta-amylase; beta-alpha-barrels, optimum PH, hydrolase; HET: GLC; 1.85A {Bacillus cereus} SCOP: b.3.1.1 c.1.8.1 PDB: 1b90_A* 1j0y_A* 1j0z_A* 1j10_A* 1b9z_A* 1j12_A* 1j18_A* 1j11_A* 5bca_A 1veo_A* 1itc_A* 1ven_A* 1vep_A* 1cqy_A
Probab=1.00 E-value=1 Score=213.32 Aligned_cols=247 Identities=14% Similarity=0.099 Sum_probs=162.7
Q ss_pred EEEEEEEEEEECCCCCHHCHHHHHHHHHHCCCCEEEECCCCCCCCCC-CCEEECCCCHHHHHHHHHHHHCCCEEEEEECC
Q ss_conf 89799999850999990109999999998699889982118767898-97010049202999999999869689984177
Q 003612 42 HRKILFSGSIHYPRSTPQMWPRLIAKAKEGGLDVVQTLVFWNLHEPQ-PGQFDFSGRRDLVRFIKEVQAQGLYVCLRIGP 120 (807)
Q Consensus 42 ~~~~~~~g~~hy~r~~~~~W~~~l~~~ka~G~N~V~~yv~W~~hEp~-~G~~df~g~~dl~~fl~~a~~~GL~Vilr~GP 120 (807)
..+.++.++.+....+++.|+++|++||++|+|+||++|+|+.|||+ ||+|||++ ++++|++|+++||+||+++++
T Consensus 12 ~~~vmlp~~~v~~~~~~~~w~~dl~~mk~~Gln~Vr~~V~W~~iEP~g~G~ydf~~---~d~~id~a~~~GL~viv~L~~ 88 (516)
T 1vem_A 12 KAYLMAPLKKIPEVTNWETFENDLRWAKQNGFYAITVDFWWGDMEKNGDQQFDFSY---AQRFAQSVKNAGMKMIPIIST 88 (516)
T ss_dssp EEEEECCSSCGGGTSCHHHHHHHHHHHHHTTEEEEEEEEEHHHHTCSSTTCCCCHH---HHHHHHHHHHTTCEEEEEEEC
T ss_pred CEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHCCCCCCCCCCHHH---HHHHHHHHHHCCCEEEEEECC
T ss_conf 74998056552899999999999999997399999984234541388999363699---999999999779989999311
Q ss_pred CCCCC----CCCCCCCCCCCCC-C--CCCCCCCC----HHH-----HHHHHHHHHHHHHHHHHCCCCCCCCCCEEE----
Q ss_conf 44433----3578878534668-9--96446898----023-----999999999999999863321136996485----
Q 003612 121 FIEGE----WGYGGLPFWLHDV-P--GIVFRSDN----EPF-----KFHMKRYATMIVNMMKAARLYASQGGPIIL---- 180 (807)
Q Consensus 121 yi~aE----~~~GG~P~Wl~~~-p--~~~~R~~d----~~~-----~~~~~~~~~~i~~~i~~~~~~~~~gg~II~---- 180 (807)
|+|++ |..+++|.||.+. | ++..++.+ +.+ .....+.+.++++.++++ +.++++||+
T Consensus 89 h~c~g~~g~~~~~~lP~WL~~~~p~~di~~~d~~G~~~~~~~~~~~~~~~~~~y~~~~~~la~r---~~~~~~vI~eI~v 165 (516)
T 1vem_A 89 HQCGGNVGDDCNVPIPSWVWNQKSDDSLYFKSETGTVNKETLNPLASDVIRKEYGELYTAFAAA---MKPYKDVIAKIYL 165 (516)
T ss_dssp SCBSSSTTCCCCBCCCGGGGGGCSSSCSSEECTTCCEECSSCCTTCHHHHHHHHHHHHHHHHHH---TGGGGGGBCCEEE
T ss_pred CCCCCCCCCCCCCCCCHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH---HCCCCCEEEEEEC
T ss_conf 0137776778778999778725996432668899989845354234676389999999999999---7438998999622
Q ss_pred ------------CCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf ------------1634666532135-688976899999999883399634188057899942223678876687788999
Q 003612 181 ------------SQIENEYGMVEHS-FLEKGPPYVRWAAKLAVDLQTGVPWVMCKQDDAPDPVINACNGRQCGETFAGPN 247 (807)
Q Consensus 181 ------------~QieNEyg~~~~~-~~~~~~~y~~~l~~~~~~~g~~vp~~~~~~~~~~~~~~~~~ng~~~~~~~~~~~ 247 (807)
||++||||+++.. +-.-++.+++.+++.+++..-+++-.. ... |... .+|..-.
T Consensus 166 glG~~GelryPs~qv~NE~g~~g~~~~~~y~~~~~~~fr~~l~~~ygtl~~ln-----------~aW-g~~~-~~~~~i~ 232 (516)
T 1vem_A 166 SGGPAGELRYPSYTTSDGTGYPSRGKFQAYTEFAKSKFRLWVLNKYGSLNEVN-----------KAW-GTKL-ISELAIL 232 (516)
T ss_dssp CCSGGGBSSCCCCCTTTTCCTTSCCCCCCCSHHHHHHHHHHHHHHHSSHHHHH-----------HHH-TCCC-SSGGGCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHCCCHHHHH-----------HHH-CCCC-CCHHHHC
T ss_conf 45534543565543335767877654200489999999999998628777788-----------976-8797-8898827
Q ss_pred CCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH----CCC-EEEEEEEEECCCCCCCCC
Q ss_conf 99999421013553234458976447988999999999994----188-046687865267968878
Q 003612 248 SPDKPAIWTENWTSFYQVYGDEARIRSAEDIAYHVALFIAK----MKG-SYVNYYMYHGGTNFGRTA 309 (807)
Q Consensus 248 ~~~~P~~~~E~~~Gwf~~WG~~~~~~~~~~~~~~~~~~~~~----~g~-s~~n~YM~hGGTNfG~~~ 309 (807)
.|..+ ..+++.||+++||.....-.++.++..+.++++. .++ .-+.+..--.|.+|-+..
T Consensus 233 ~P~~~--~~~~~~gw~s~~~~df~~f~s~~l~~~~~~~l~~a~~~f~~~~~~~~~~kv~g~hw~y~~ 297 (516)
T 1vem_A 233 PPSDG--EQFLMNGYLSMYGKDYLEWYQGILENHTKLIGELAHNAFDTTFQVPIGAKIAGVHWQYNN 297 (516)
T ss_dssp SCSCH--HHHHHTGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCEEEEECCCCTTTTC
T ss_pred CCCCC--CCCCCCCCHHHHCCHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEECCCC
T ss_conf 86556--543579833665072988563789999999999878754887684289984742016889
No 8
>1kwg_A Beta-galactosidase; TIM barrel, glycoside hydrolase family 42, trimer, hydrolase; 1.60A {Thermus thermophilus} SCOP: b.71.1.1 c.1.8.1 c.23.16.5 PDB: 1kwk_A*
Probab=1.00 E-value=1 Score=201.75 Aligned_cols=273 Identities=15% Similarity=0.159 Sum_probs=183.0
Q ss_pred EEEEEEECCCCCHHCHHHHHHHHHHCCCCEEEECC-CCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCCC
Q ss_conf 99998509999901099999999986998899821-18767898970100492029999999998696899841774443
Q 003612 46 LFSGSIHYPRSTPQMWPRLIAKAKEGGLDVVQTLV-FWNLHEPQPGQFDFSGRRDLVRFIKEVQAQGLYVCLRIGPFIEG 124 (807)
Q Consensus 46 ~~~g~~hy~r~~~~~W~~~l~~~ka~G~N~V~~yv-~W~~hEp~~G~~df~g~~dl~~fl~~a~~~GL~Vilr~GPyi~a 124 (807)
++|+..|+.+.+++.|++++++||++|+|+||+++ .|+.+||+||+|||+. |++++++|+++||+||+++..
T Consensus 1 ~~G~~y~pe~w~~~~~~~dl~~mk~~G~N~vR~~if~W~~~eP~~g~~d~~~---ld~~ld~a~~~Gi~vil~~~~---- 73 (645)
T 1kwg_A 1 MLGVCYYPEHWPKERWKEDARRMREAGLSHVRIGEFAWALLEPEPGRLEWGW---LDEAIATLAAEGLKVVLGTPT---- 73 (645)
T ss_dssp CEEEECCGGGSCHHHHHHHHHHHHHHTCCEEEECTTCHHHHCSBTTBCCCHH---HHHHHHHHHTTTCEEEEECST----
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEECHHHCCCCCCCCCHHH---HHHHHHHHHHCCCEEEEECCC----
T ss_conf 9777679665897899999999998299889992451420488899458699---999999999789989995898----
Q ss_pred CCCCCCCCCCCC-CCCCCCC------------C----CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCC
Q ss_conf 335788785346-6899644------------6----8980239999999999999998633211369964851634666
Q 003612 125 EWGYGGLPFWLH-DVPGIVF------------R----SDNEPFKFHMKRYATMIVNMMKAARLYASQGGPIILSQIENEY 187 (807)
Q Consensus 125 E~~~GG~P~Wl~-~~p~~~~------------R----~~d~~~~~~~~~~~~~i~~~i~~~~~~~~~gg~II~~QieNEy 187 (807)
+++|.|+. ++|.... | .++|.|.+++++++++++++. ++++.|++|||+||+
T Consensus 74 ----~~~P~Wl~~~~P~~~~~~~~G~~~~~g~r~~~~~~~p~~~~~~~~~~~~l~~ry-------~~~p~V~~w~i~NE~ 142 (645)
T 1kwg_A 74 ----ATPPKWLVDRYPEILPVDREGRRRRFGGRRHYCFSSPVYREEARRIVTLLAERY-------GGLEAVAGFQTDNEY 142 (645)
T ss_dssp ----TSCCHHHHHHCGGGSCBCTTSCBCCSSSSCCCCTTCHHHHHHHHHHHHHHHHHH-------TTCTTEEEEECSSST
T ss_pred ----CCCCHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH-------CCCCCEEEEEECCCC
T ss_conf ----889856762598526667998676667645679999999999999999999985-------999818999936867
Q ss_pred CCCC--CCCCC-C--------------------------------------------------------------CHHHH
Q ss_conf 5321--35688-9--------------------------------------------------------------76899
Q 003612 188 GMVE--HSFLE-K--------------------------------------------------------------GPPYV 202 (807)
Q Consensus 188 g~~~--~~~~~-~--------------------------------------------------------------~~~y~ 202 (807)
+... .+|+. + ..+|+
T Consensus 143 ~~~~~~~~y~~~~~~~f~~wL~~~y~~i~~ln~awgt~fws~~~~~w~~i~~P~~~~~~~~~~~~~d~~~F~~~~~~~~~ 222 (645)
T 1kwg_A 143 GCHDTVRCYCPRCQEAFRGWLEARYGTIEALNEAWGTAFWSQRYRSFAEVELPHLTVAEPNPSHLLDYYRFASDQVRAFN 222 (645)
T ss_dssp TTTTTSCCCSHHHHHHHHHHHHHHHSSHHHHHHHHTTTGGGCCCSSGGGCCCSCSCSSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 77878886899999999999998866999999875745234555768554898766777884788889999999999999
Q ss_pred HHHHHHHHHCCCCCCEEEECCCC--CCC-----CCCCCCC-CCCCC---C------C----CC---CC-----------C
Q ss_conf 99999988339963418805789--994-----2223678-87668---7------7----88---99-----------9
Q 003612 203 RWAAKLAVDLQTGVPWVMCKQDD--APD-----PVINACN-GRQCG---E------T----FA---GP-----------N 247 (807)
Q Consensus 203 ~~l~~~~~~~g~~vp~~~~~~~~--~~~-----~~~~~~n-g~~~~---~------~----~~---~~-----------~ 247 (807)
+++.+..|+.+.++|.+++.... ..+ +.++... ..|.. + + |. .+ .
T Consensus 223 ~~~~~~ir~~~p~~pvt~n~~~~~~~~d~~~~a~~lDv~~~d~Y~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~dl~r~ 302 (645)
T 1kwg_A 223 RLQVEILRAHAPGKFVTHNFMGFFTDLDAFALAQDLDFASWDSYPLGFTDLMPLPPEEKLRYARTGHPDVAAFHHDLYRG 302 (645)
T ss_dssp HHHHHHHHHHSTTCEEECEECTTCCSSCHHHHGGGSSSEEEEECHHHHHHHSCCCHHHHHHTTTTCCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 99999999868998579847767777689998744959997778864444333333211123456755677777778876
Q ss_pred CCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 99999421013553234458976447988999999999994188046687865267968878875322456789878779
Q 003612 248 SPDKPAIWTENWTSFYQVYGDEARIRSAEDIAYHVALFIAKMKGSYVNYYMYHGGTNFGRTASAYVLTGYYDQAPLDEYG 327 (807)
Q Consensus 248 ~~~~P~~~~E~~~Gwf~~WG~~~~~~~~~~~~~~~~~~~~~~g~s~~n~YM~hGGTNfG~~~g~~~~TSYDy~Api~E~G 327 (807)
...+|.+.+|+..|..+ |+.......+..+.......++. |+..++|+ .+........+|+++ .|+++|
T Consensus 303 ~~~kP~~i~E~~~~~~~-w~~~~~~~~pg~~r~~~~~~~a~-Ga~~~~~f--------~w~~~~~~~E~~~~g-~l~~~g 371 (645)
T 1kwg_A 303 VGRGRFWVMEQQPGPVN-WAPHNPSPAPGMVRLWTWEALAH-GAEVVSYF--------RWRQAPFAQEQMHAG-LHRPDS 371 (645)
T ss_dssp HTTTCEEEEEECCSCCS-SSSSCCCCCTTHHHHHHHHHHHT-TCSCEEEE--------CSBCCSSSTTTTSCC-SBCTTS
T ss_pred HCCCCEEEECCCCCCCC-CCCCCCCCCCCHHHHHHHHHHHC-CCCEEEEE--------EECCCCCCCCCCCCC-CCCCCC
T ss_conf 05998798568888888-76678889930999999999855-78778886--------312689971014434-338789
Q ss_pred CCCCCHHHHHHHHHHHHHHHC
Q ss_conf 888802799999999986412
Q 003612 328 LLRQPKWGHLKELHSAVKLCL 348 (807)
Q Consensus 328 ~~~t~Ky~~lr~l~~~~~~~~ 348 (807)
.+ +++|.+++++...++..+
T Consensus 372 ~~-~~~~~e~~~~~~~l~~~~ 391 (645)
T 1kwg_A 372 AP-DQGFFEAKRVAEELAALA 391 (645)
T ss_dssp CB-CHHHHHHHHHHHHHHTCC
T ss_pred CC-CHHHHHHHHHHHHHHHHC
T ss_conf 92-889999999999998633
No 9
>3tty_A Beta-GAL, beta-galactosidase; TIM barrel, glycoside hydrolase, hydrolase; HET: GLA; 2.25A {Bacillus circulans subsp} PDB: 3tts_A*
Probab=1.00 E-value=1 Score=201.41 Aligned_cols=286 Identities=16% Similarity=0.192 Sum_probs=179.1
Q ss_pred EEEEEEEEEECCCCCHHCHHHHHHHHHHCCCCEEEECC-CCCCCCCCCCEEECCCCHHHHHHHHHHHHCCCEEEEEECCC
Q ss_conf 97999998509999901099999999986998899821-18767898970100492029999999998696899841774
Q 003612 43 RKILFSGSIHYPRSTPQMWPRLIAKAKEGGLDVVQTLV-FWNLHEPQPGQFDFSGRRDLVRFIKEVQAQGLYVCLRIGPF 121 (807)
Q Consensus 43 ~~~~~~g~~hy~r~~~~~W~~~l~~~ka~G~N~V~~yv-~W~~hEp~~G~~df~g~~dl~~fl~~a~~~GL~Vilr~GPy 121 (807)
+.+++||..|+.+++++.|++++++||++|+|+||+++ .|+.+||+||+|||+. ++++|++|+++||+|||+++++
T Consensus 7 ~~~~~G~~y~pe~w~~~~~~~Dl~~mk~~G~n~vr~~if~W~~~eP~~g~~~f~~---ld~~i~~~~~~Gi~vil~~~~~ 83 (675)
T 3tty_A 7 PKIWYGGDYNPEQWDKATMEEDMRMFNLAGIDVATVNVFSWAKIQRDEVSYDFTW---LDDIIERLTKENIYLCLATSTG 83 (675)
T ss_dssp CSCEEEEECCGGGSCHHHHHHHHHHHHHHTCCEEEECSSCHHHHBSSSSCBCCHH---HHHHHHHHHHTTCEEEEECCTT
T ss_pred CCCEEEEECCHHHCCHHHHHHHHHHHHHCCCCEEEEEEECHHHHCCCCCCCCHHH---HHHHHHHHHHCCCEEEEECCCC
T ss_conf 8765700579164998999999999997399889994112442187698638899---9999999998799999967877
Q ss_pred CCCCCCCCCCCCCCCCCC-CCC--------CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCCCCC
Q ss_conf 443335788785346689-964--------46898023999999999999999863321136996485163466653213
Q 003612 122 IEGEWGYGGLPFWLHDVP-GIV--------FRSDNEPFKFHMKRYATMIVNMMKAARLYASQGGPIILSQIENEYGMVEH 192 (807)
Q Consensus 122 i~aE~~~GG~P~Wl~~~p-~~~--------~R~~d~~~~~~~~~~~~~i~~~i~~~~~~~~~gg~II~~QieNEyg~~~~ 192 (807)
.+..|-....|.|+..++ +.. ...++|.|++++++++++++++ |+++++||+||++||+++.
T Consensus 84 ~~P~Wl~~~~Pe~l~~d~~G~~~~~g~r~~~~~~~p~~~~~~~~~~~~l~~r-------y~~~p~Vi~w~v~NE~g~~-- 154 (675)
T 3tty_A 84 AHPAWMAKKYPDVLRVDYEGRKRKFGGRHNSCPNSPTYRKYAKILAGKLAER-------YKDHPQIVMWHVSNEYGGY-- 154 (675)
T ss_dssp SCCHHHHHHCGGGBCBCTTSCBCCSCSSSCBCTTCHHHHHHHHHHHHHHHHH-------TTTCTTEEEEECSSSCCCC--
T ss_pred CCCHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHH-------HCCCCCEEEEEECCCCCCC--
T ss_conf 7873344338751566689968036875678999999999999999999997-------3889968999975666787--
Q ss_pred CCCC-CCHHHHHHHHHHHHHC-------CC-------------CCCE---------EEECC---CC--------------
Q ss_conf 5688-9768999999998833-------99-------------6341---------88057---89--------------
Q 003612 193 SFLE-KGPPYVRWAAKLAVDL-------QT-------------GVPW---------VMCKQ---DD-------------- 225 (807)
Q Consensus 193 ~~~~-~~~~y~~~l~~~~~~~-------g~-------------~vp~---------~~~~~---~~-------------- 225 (807)
+|+. +.++|.+||++++.+. |. ..|- ...+. .|
T Consensus 155 ~y~~~~~~~Fr~wLk~kY~ti~~LN~aWgt~fWs~~y~~w~ei~~P~~~~~~~~~~~~~~p~~~lD~~rF~~~~~~~~~~ 234 (675)
T 3tty_A 155 CYCDNCEKQFRVWLKERYGTLEALNKAWNTSFWSHTFYDWDEIVAPNALSEEWSGNRTNFQGISLDYRRFQSDSLLECFK 234 (675)
T ss_dssp CCSHHHHHHHHHHHHHHHSSHHHHHHHTTTTGGGCCCSSGGGCCCCSTTTTEETTTEESCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 68989999999999988657999999867552357557798716985656554445667858999999999999999999
Q ss_pred ---------CCC-CC-CCCCCCCCCC--------------CCCCC----------------CCCCCCCCEEECCCCCCCC
Q ss_conf ---------994-22-2367887668--------------77889----------------9999999421013553234
Q 003612 226 ---------APD-PV-INACNGRQCG--------------ETFAG----------------PNSPDKPAIWTENWTSFYQ 264 (807)
Q Consensus 226 ---------~~~-~~-~~~~ng~~~~--------------~~~~~----------------~~~~~~P~~~~E~~~Gwf~ 264 (807)
.|+ ++ .+....+... |.+.. .....+|.+.+|.++| ..
T Consensus 235 ~~~d~iR~~~P~~pvt~N~~~~~~~~D~~~~a~~~Dvvs~D~Yp~~~~~~~~~a~~~dl~R~~~~g~p~~~mE~~~~-~~ 313 (675)
T 3tty_A 235 MERDELKRWTPDIPVTTNLMGFYPELDYFKWAKEMDVVSWDNYPSMDTPFSFTAMAHNLMRGLKSGQPFMLMEQTPG-VQ 313 (675)
T ss_dssp HHHHHHHHHCTTSCEECEECTTCTTSCHHHHHTTCSSCEEECCCCTTSCHHHHHHHHHHHHHTTTTCCEEEEECCSS-CC
T ss_pred HHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCC-CC
T ss_conf 99999997589987797626566776999996159899977888867888899989988876047998699657778-88
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 45897644798899999999999418804668786526796887887532245678987877988880279999999998
Q 003612 265 VYGDEARIRSAEDIAYHVALFIAKMKGSYVNYYMYHGGTNFGRTASAYVLTGYYDQAPLDEYGLLRQPKWGHLKELHSAV 344 (807)
Q Consensus 265 ~WG~~~~~~~~~~~~~~~~~~~~~~g~s~~n~YM~hGGTNfG~~~g~~~~TSYDy~Api~E~G~~~t~Ky~~lr~l~~~~ 344 (807)
.|..-.....+..+.......++. |...+.|+-++...+ ..-.| -.+.|+-+|.+.++.|.+++++...+
T Consensus 314 ~w~~~~~~~~pg~~r~~~~~~~A~-Ga~~v~~f~wr~~~~--------g~E~~-h~g~~~~~g~~~~r~~~ev~~~~~~l 383 (675)
T 3tty_A 314 NWQPYNSAKRPGVMRLWSYQAVAH-GADTVMFFQLRRSVG--------ACEKY-HGAVIEHVGHEHTRVFRECAELGKEL 383 (675)
T ss_dssp TTSSBCCCCCTTHHHHHHHHHHHT-TEEEEEESCSBCCCS--------GGGTT-SCCSBCTTCSSCSHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHC-CCCEEEEEECCCCCC--------CHHHH-HCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 885778889950999999999856-257676341168888--------55665-02645878998846999999999999
Q ss_pred HHHCCCC
Q ss_conf 6412666
Q 003612 345 KLCLKPM 351 (807)
Q Consensus 345 ~~~~~~~ 351 (807)
+..+..+
T Consensus 384 ~~l~~~~ 390 (675)
T 3tty_A 384 QQLGDTI 390 (675)
T ss_dssp HHHTTTT
T ss_pred HHHHHHH
T ss_conf 9756664
No 10
>3pzg_A Mannan endo-1,4-beta-mannosidase. glycosyl hydrol 5; alpha/beta barrel, glycosyl hydrolase, sugar binding, secret hydrolase; 1.40A {Thermotoga petrophila} PDB: 3pz9_A 3pzi_A* 3pzm_A 3pzn_A* 3pzo_A* 3pzq_A*
Probab=1.00 E-value=1 Score=186.50 Aligned_cols=181 Identities=18% Similarity=0.316 Sum_probs=140.2
Q ss_pred EECCEEEECCEEEEEEEEEEECCCC-CHHCHHHHHHHHHHCCCCEEEECCCC----------CCCCCCCCEEE-------
Q ss_conf 8078199979897999998509999-90109999999998699889982118----------76789897010-------
Q 003612 32 YDGRSLIINGHRKILFSGSIHYPRS-TPQMWPRLIAKAKEGGLDVVQTLVFW----------NLHEPQPGQFD------- 93 (807)
Q Consensus 32 ~~~~~f~l~G~~~~~~~g~~hy~r~-~~~~W~~~l~~~ka~G~N~V~~yv~W----------~~hEp~~G~~d------- 93 (807)
.++.+|.+||||+++.|..+||.+. +++.|+++|++||++|+|+||+++|| ..+||.||+||
T Consensus 15 ~~g~~F~ldGkp~~f~G~N~y~~~~~~~~~i~~~l~~~a~~G~N~VRv~~f~d~~~~~~~~~~~lqp~~G~yd~~~~~~~ 94 (383)
T 3pzg_A 15 VPRGSHMLNGKEFRFIGSNNYYMHYKSNRMIDSVLESARDMGIKVLRIWGFLDGESYCRDKNTYMHPEPGVFGVPEGISN 94 (383)
T ss_dssp ------------CCEEEEECSCTTTSCHHHHHHHHHHHHHHTCCEEEEECCCBSHHHHHHHTEESBSBTTBCSSCTTCSS
T ss_pred CCCCEEEECCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 04998989999999988870245669999999999999976998899701156555566665433667985464334442
Q ss_pred -CCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCC-CCCCCCCCCCCCCCC--CCCCCCHHHHHHHHHHHHHHHHHHHHC-
Q ss_conf -049202999999999869689984177444333-578878534668996--446898023999999999999999863-
Q 003612 94 -FSGRRDLVRFIKEVQAQGLYVCLRIGPFIEGEW-GYGGLPFWLHDVPGI--VFRSDNEPFKFHMKRYATMIVNMMKAA- 168 (807)
Q Consensus 94 -f~g~~dl~~fl~~a~~~GL~Vilr~GPyi~aE~-~~GG~P~Wl~~~p~~--~~R~~d~~~~~~~~~~~~~i~~~i~~~- 168 (807)
.++...||++|++|+++||+|||.+. .+| ++||.|.|+....+. .....||.++++++++++.|+++++++
T Consensus 95 ~~~~~~~LD~~i~~A~k~GI~viL~l~----~~w~~~GG~~~y~~~~g~~~~~~f~~dp~~~~~~~~~~~~l~~r~N~~t 170 (383)
T 3pzg_A 95 AQNGFERLDYTIAKAKELGIKLIIVLV----NNWDDFGGMNQYVRWFGGTHHDDFYRDERIKEEYKKYVSFLINHVNVYT 170 (383)
T ss_dssp CEEHHHHHHHHHHHHHHHTCEEEEECC----BSSSTTSHHHHHHHHTTCCSTTHHHHCHHHHHHHHHHHHHHHTCBCTTT
T ss_pred HHHHHHHHHHHHHHHHHCCCEEEEECC----CCCCCCCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 478999999999999988998999736----6654557864113324898635556899999999999999985535456
Q ss_pred CCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHHHH---HHHCCCCCCEE
Q ss_conf 3211369964851634666532135688976899999999---88339963418
Q 003612 169 RLYASQGGPIILSQIENEYGMVEHSFLEKGPPYVRWAAKL---AVDLQTGVPWV 219 (807)
Q Consensus 169 ~~~~~~gg~II~~QieNEyg~~~~~~~~~~~~y~~~l~~~---~~~~g~~vp~~ 219 (807)
.+.++++++|++|||.||+++... .....+..|++++ .|+.+-+.|.+
T Consensus 171 G~~y~~~p~I~~w~l~NEp~~~~~---~~~~~~~~w~~~~~~~IR~~Dp~~lVt 221 (383)
T 3pzg_A 171 GVPYREEPTIMAWELANELRCETD---KSGNTLVEWVKEMSSYIKSLDPNHLVA 221 (383)
T ss_dssp CCBGGGCTTEEEEESCBTCCCTTC---TTSHHHHHHHHHHHHHHHHHCSSSEEE
T ss_pred CCCCCCCCCEEEEEECCCCCCCCC---CCHHHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 731079985789995377776667---647999999999999999658996699
Done!