Query 003613
Match_columns 807
No_of_seqs 355 out of 2419
Neff 6.0
Searched_HMMs 29240
Date Tue Mar 26 19:02:45 2013
Command hhsearch -i /local_scratch/syshi/lefta3m/003613.a3m -d /local_scratch/syshi/pdb70.hhm -v 0 -o /local_scratch/syshi/H1_1661-1665//hhsearch_pdb/003613hhsearch_pdb
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ht6_A AMY1, alpha-amylase iso 1.0 1 1 421.0 28.1 288 509-797 2-301 (405)
2 4aee_A Alpha amylase, catalyti 1.0 1 1 395.6 16.1 279 467-794 223-543 (696)
3 3edf_A FSPCMD, cyclomaltodextr 1.0 1 1 392.8 22.0 294 467-794 104-425 (601)
4 1ea9_C Cyclomaltodextrinase; h 1.0 1 1 386.5 22.3 284 468-793 129-427 (583)
5 2guy_A Alpha-amylase A; (beta- 1.0 1 1 386.3 9.2 282 469-795 8-305 (478)
6 4aef_A Neopullulanase (alpha-a 1.0 1 1 386.0 11.3 278 467-793 204-508 (645)
7 2aaa_A Alpha-amylase; glycosid 1.0 1 1 383.3 13.9 282 469-795 8-305 (484)
8 1cyg_A Cyclodextrin glucanotra 1.0 1 1 382.8 16.1 290 469-793 11-330 (680)
9 3bmv_A Cyclomaltodextrin gluca 1.0 1 1 380.8 16.8 289 469-792 14-334 (683)
10 2wc7_A Alpha amylase, catalyti 1.0 1 1 380.2 17.6 289 466-795 8-331 (488)
No 1
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=1.00 E-value=1 Score=421.04 Aligned_cols=288 Identities=47% Similarity=1.000 Sum_probs=234.3
Q ss_pred EEEEEEEECCCCCC-CCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCC-CCCCCHHHHHHHHHHHHHC
Q ss_conf 34630010347999-983999999699999859999997997888999999854477558-9999999999999999885
Q 003613 509 EILCQGFNWESHKS-GRWYMELKEKATELSSLGFSVIWLPPPTESVSPEGYMPRDLYNLS-SRYGNIDELKDVVNKFHDV 586 (807)
Q Consensus 509 ~i~~~~F~Wd~~~~-Ggdl~gI~ekLdYLk~LGvt~IyL~PIfe~~s~hgYd~~Dy~~ID-p~lGt~edfk~LV~aaH~~ 586 (807)
++++|+|+||++++ ||+|+||+++||||++||||+|||+||++++++|||++.||++|| |+|||.+||++||++||++
T Consensus 2 ~v~~~~F~~d~~~d~~G~~~gi~~~ldyl~~lGv~~i~l~Pi~~~~~~~gY~~~d~~~id~~~~Gt~~d~~~lv~~~h~~ 81 (405)
T 1ht6_A 2 QVLFQGFNWESWKQSGGWYNMMMGKVDDIAAAGVTHVWLPPPSHSVSNEGYMPGRLYDIDASKYGNAAELKSLIGALHGK 81 (405)
T ss_dssp CCEEECCCTTGGGCTTCHHHHHHTTHHHHHHTTCCEEEECCCSCBSSTTSSSBCCTTCGGGCTTCCHHHHHHHHHHHHHT
T ss_pred CCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
T ss_conf 62898577477898786899999989999975998899398866889999785322547975678999999999999987
Q ss_pred CCEEEEEEEECCCCCCCCCCCCCCCCCCC-----CCCCCCCCCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf 96999967304444566767985323699-----67888976557999878-8998777998899987888998899999
Q 003613 587 GMKILGDVVLNHRCAHYQNQNGVWNIFGG-----RLNWDDRAVVADDPHFQ-GRGNKSSGDNFHAAPNIDHSQDFVRKDI 660 (807)
Q Consensus 587 GIkVILD~V~NH~g~d~~~~~g~~~~~~~-----~~~w~~~~~~~~~~~f~-~~g~~~~~~~~~~lPdln~~np~V~~~i 660 (807)
||+||+|+|+||++.++..+++.|..+.+ ..+|.......+.+.|. +.+.+..+.++..+|+||+.||+|+++|
T Consensus 82 Gi~VilD~V~NH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dln~~~p~v~~~i 161 (405)
T 1ht6_A 82 GVQAIADIVINHRCADYKDSRGIYCIFEGGTSDGRLDWGPHMICRDDTKYSDGTANLDTGADFAAAPDIDHLNDRVQREL 161 (405)
T ss_dssp TCEEEEEECCSBCCCSEECTTSCEEECCCSSSSSTTCCCGGGBCTTCTTTCCSCSCCCSSCCCTTSCBBCTTCHHHHHHH
T ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 99899997967526888787887113789886888788776361788776789886668887676770276999999999
Q ss_pred HHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCC-CCCCCCCCHHHHHHHHHHHHHCCC---
Q ss_conf 9999999994292599983446210899999998329948992333697764-344553224668999999862599---
Q 003613 661 KEWLCWLRNEIGYDGWRLDFVRGFWGGYVKDYLEATEPYFAVGEYWDSLSYT-YGEMDHNQDAHRQRIIDWINAASG--- 736 (807)
Q Consensus 661 ~~~l~~Wi~~~GVDGfRLDaA~~f~~~~i~~i~~~~~~~~lvGE~w~~~~~~-~G~~~y~~~~~~~~i~~yl~~~~~--- 736 (807)
++++++|++++||||||||+|++++.+++++++++.+|.+++||+|...++. .+.+.|++.++++.+..|+...++
T Consensus 162 ~~~~~~w~~~~gvDGfR~D~~~~~~~~f~~~~~~~~~p~~~igE~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~g~~~~ 241 (405)
T 1ht6_A 162 KEWLLWLKSDLGFDAWRLDFARGYSPEMAKVYIDGTSPSLAVAEVWDNMATGGDGKPNYDQDAHRQNLVNWVDKVGGAAS 241 (405)
T ss_dssp HHHHHHHHHHHCCCEEEETTGGGSCHHHHHHHHHHHCCSCEEECCCCCCCBCTTSSBCSCCHHHHHHHHHHHHHHTGGGS
T ss_pred HHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCC
T ss_conf 99999997625998999835045889999999984189549998436886567543121110147899998753586433
Q ss_pred CCEECCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCC
Q ss_conf 7100020248999997601730121200299999757687852110534577888888865
Q 003613 737 TAGAFDVTTKGILHSALDRCEYWRLSDEKGKPPGVVGWWPSRAVTFIENHDTGSTQVRSSL 797 (807)
Q Consensus 737 l~svfDfpl~~~L~~al~~~~~~~l~~~~~~~~~l~~~~P~~av~FieNHDt~R~~~~~~~ 797 (807)
..++|||++...+..++. ++.+.+.+..+...+++..+|..+++|++|||+.|+.+.+.+
T Consensus 242 ~~~vfdf~~~~~~~~~~~-~~~~~l~~~~~~~~~~~~~~p~~~~~fl~nHD~~r~~~~~~~ 301 (405)
T 1ht6_A 242 AGMVFDFTTKGILNAAVE-GELWRLIDPQGKAPGVMGWWPAKAVTFVDNHDTGSTQAMWPF 301 (405)
T ss_dssp SEEEECHHHHHHHHHHTT-TCGGGGSCTTSSCSSHHHHCGGGEEEESCCTTTSTTTCSSCC
T ss_pred CCEEECHHHHHHHHHHHH-HHHHHHHHHHCCCCHHHHCCHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 220313166799999986-258888765325610432280555304677677653234467
No 2
>4aee_A Alpha amylase, catalytic region; hydrolase, hyperthermostable, cyclodextrin hydrolase, GH13; 2.28A {Staphylothermus marinus}
Probab=1.00 E-value=1 Score=395.57 Aligned_cols=279 Identities=16% Similarity=0.206 Sum_probs=203.9
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 21132100011135455530000113689999999999764134630010347999983999999699999859999997
Q 003613 467 KLAAEAYSIFRTTAPTFFEEAAVELEESKPPAKISPGTGTGFEILCQGFNWESHKSGRWYMELKEKATELSSLGFSVIWL 546 (807)
Q Consensus 467 ~~pav~YqIFp~~~drF~~~~~~~~~~~~p~~~~~~~~~~~~~i~~~~F~Wd~~~~Ggdl~gI~ekLdYLk~LGvt~IyL 546 (807)
-..+|+||||| +||++++..+.+ ... ..+. ......|. ||||+||+++||||++||||+|||
T Consensus 223 ~~~~viYqI~p---~rF~~~~~~n~~----~~~---~~w~--~~~~~~~~------gGdl~Gi~~kLdyLk~LGvt~IwL 284 (696)
T 4aee_A 223 YMGTVYYQIFI---DSFDNGDPNNDP----PNR---IKKT--VPREYGYY------GGDLAGIMKHIDHLEDLGVETIYL 284 (696)
T ss_dssp TSSCCEEEECG---GGTCCCCGGGCC----SSC---CCCC--SSCCSSCC------CCCHHHHHTTHHHHHHHTCCEEEE
T ss_pred HHCCEEEEEEH---HHHCCCCCCCCC----CCC---CCCC--CCCCCCCC------CCCHHHHHHHHHHHHHCCCCEEEE
T ss_conf 64685999944---785489877775----555---5556--77655667------749999998768999769999998
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCC-----------CCCCCCCCCCC
Q ss_conf 9978889999998544775589999999999999999885969999673044445667-----------67985323699
Q 003613 547 PPPTESVSPEGYMPRDLYNLSSRYGNIDELKDVVNKFHDVGMKILGDVVLNHRCAHYQ-----------NQNGVWNIFGG 615 (807)
Q Consensus 547 ~PIfe~~s~hgYd~~Dy~~IDp~lGt~edfk~LV~aaH~~GIkVILD~V~NH~g~d~~-----------~~~g~~~~~~~ 615 (807)
+|||+++++|||++.||++|||+|||++||++||++||++||+||||+|+||+|.++. ++...|+.
T Consensus 285 ~Pi~~s~~~~GYd~~Dy~~idp~~Gt~~df~~Lv~~aH~~GikVilD~V~NHts~~~~~f~~~~~~~~~s~y~dwy~--- 361 (696)
T 4aee_A 285 TPIFSSTSYHRYDTIDYKSIDKYLGTMEDFEKLVQVLHSRKIKIVLDITMHHTNPCNELFVKALREGENSPYWEMFS--- 361 (696)
T ss_dssp CCCEEESSSSCCSEEEEEEECGGGCCHHHHHHHHHHHHHTTCEEEEEECSSEECTTSHHHHHHHHHCTTSTTGGGBC---
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCCEE---
T ss_conf 97426898899581222443745699999999999999779999994265435766788999875288898888257---
Q ss_pred CCCCCCCCCC----------CCCC----------CC-CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 6788897655----------7999----------87-8899877799889998788899889999999999999942925
Q 003613 616 RLNWDDRAVV----------ADDP----------HF-QGRGNKSSGDNFHAAPNIDHSQDFVRKDIKEWLCWLRNEIGYD 674 (807)
Q Consensus 616 ~~~w~~~~~~----------~~~~----------~f-~~~g~~~~~~~~~~lPdln~~np~V~~~i~~~l~~Wi~~~GVD 674 (807)
|...... ...+ .| ...++|+.+.+...+|+||+.||+|+++|++++++|+ ++|||
T Consensus 362 ---~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~y~~~~~~~~~pdLN~~np~Vr~~i~~~~~~Wl-~~GvD 437 (696)
T 4aee_A 362 ---FLSPPPKEIVELMLKYIDGEECRSRELYKLDYFRNNKPFYEAFFNIWLMAKFNHDNPRTVDYFIDITKFWI-DKGID 437 (696)
T ss_dssp ---BCSCCCHHHHHHHHHHHSSSSCCGGGGGGSHHHHHSCCSBCBGGGCTTCEEBCTTCHHHHHHHHHHHHHHH-TTTCC
T ss_pred ---ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCHHHCCCCHHHHHHHHHHHHHHH-HCCCC
T ss_conf ---36888754222223346898644222333310158988555446878831115799999999999999998-67997
Q ss_pred EEEECCCCCHHHHHHHHHHHHC----CCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEECCHHHHHHHH
Q ss_conf 9998344621089999999832----994899233369776434455322466899999986259971000202489999
Q 003613 675 GWRLDFVRGFWGGYVKDYLEAT----EPYFAVGEYWDSLSYTYGEMDHNQDAHRQRIIDWINAASGTAGAFDVTTKGILH 750 (807)
Q Consensus 675 GfRLDaA~~f~~~~i~~i~~~~----~~~~lvGE~w~~~~~~~G~~~y~~~~~~~~i~~yl~~~~~l~svfDfpl~~~L~ 750 (807)
|||||+|+++..+|++++.+.+ ++++++||+ +..+ |+. +.+++++|||+++..+.
T Consensus 438 GfRlDaa~~i~~~f~~~~~~~v~~~~p~~~~igE~-~~~~-------------------~l~-~~~~d~~~n~~~~~~~~ 496 (696)
T 4aee_A 438 GFRIDVAMGIHYSWMKQYYEYIKNTYPDFLVLGEL-AENP-------------------RIY-MDYFDSAMNYYLRKAIL 496 (696)
T ss_dssp EEEETTGGGSCHHHHHHHHHHHHHHCTTCEEEECC-CSCG-------------------GGT-TTTCSEEBCHHHHHHHH
T ss_pred EEEEECHHHCCHHHHHHHHHHHHHHCCCCEEEECC-CCHH-------------------HHC-CCCCCEEECCHHHHHHH
T ss_conf 89982321089999999999998648981899454-6233-------------------440-78633587707888999
Q ss_pred HHHHCCC--HHHHHHCCCCCCCCCCCCCC----CCEECCCCCCCCCCCCC
Q ss_conf 9760173--01212002999997576878----52110534577888888
Q 003613 751 SALDRCE--YWRLSDEKGKPPGVVGWWPS----RAVTFIENHDTGSTQVR 794 (807)
Q Consensus 751 ~al~~~~--~~~l~~~~~~~~~l~~~~P~----~av~FieNHDt~R~~~~ 794 (807)
.++..+. ...+...+. .....+|. .+++|++|||+.|+...
T Consensus 497 ~~~~~~~~~~~~~~~~l~---~~~~~~~~~~~~~~~nfl~nHD~~R~~s~ 543 (696)
T 4aee_A 497 ELLIYKRIDLNEFISRIN---NVYAYIPHYKALSLYNMLGSHDVPRIKSM 543 (696)
T ss_dssp HHHTSCCSCHHHHHHHHH---HHHTTSCHHHHHHCEECSCCTTSCCHHHH
T ss_pred HHHHCCCCCHHHHHHHHH---HHHHHCCHHHHHHEEEECCCCCCCEEHHH
T ss_conf 997148988999999999---99986531232110673079998732224
No 3
>3edf_A FSPCMD, cyclomaltodextrinase; alpha-cyclodextrin complex, glycosidase, hydrolase; HET: CE6 ACX; 1.65A {Flavobacterium SP} PDB: 3edj_A* 3edk_A* 3ede_A 3edd_A* 1h3g_A
Probab=1.00 E-value=1 Score=392.77 Aligned_cols=294 Identities=19% Similarity=0.277 Sum_probs=204.5
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 21132100011135455530000113689999999999764134630010347999983999999699999859999997
Q 003613 467 KLAAEAYSIFRTTAPTFFEEAAVELEESKPPAKISPGTGTGFEILCQGFNWESHKSGRWYMELKEKATELSSLGFSVIWL 546 (807)
Q Consensus 467 ~~pav~YqIFp~~~drF~~~~~~~~~~~~p~~~~~~~~~~~~~i~~~~F~Wd~~~~Ggdl~gI~ekLdYLk~LGvt~IyL 546 (807)
...+|+||||| |||++++..+.+ .......-+.. -.+.|. ||||+||+++||||++||||+|||
T Consensus 104 ~~~~viY~i~~---drF~~gd~~nd~---~~~~~~~~~~~----~~~~~~------gGdl~gi~~~Ldyl~~LGv~aI~l 167 (601)
T 3edf_A 104 GPGDAIYQIMP---DRFANGDPSNDN---VAGMREQADRR----HGGGRH------GGDIRGTIDHLDYIAGLGFTQLWP 167 (601)
T ss_dssp CTTCCEEEECH---HHHCCSCGGGSS---CTTCSCCCCTT----STTSCC------CCCHHHHHHTHHHHHHTTCCEEEE
T ss_pred CCCCEEEEEEH---HHHCCCCCCCCC---CCCCCCCCCCC----CCCCCC------CCCHHHHHHHHHHHHHCCCCEEEE
T ss_conf 81575999945---875689987576---76755666766----656545------748999999789998769998998
Q ss_pred CCCCCCC----CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCC----CCCCCCCCC-CC-
Q ss_conf 9978889----9999985447755899999999999999998859699996730444456676----798532369-96-
Q 003613 547 PPPTESV----SPEGYMPRDLYNLSSRYGNIDELKDVVNKFHDVGMKILGDVVLNHRCAHYQN----QNGVWNIFG-GR- 616 (807)
Q Consensus 547 ~PIfe~~----s~hgYd~~Dy~~IDp~lGt~edfk~LV~aaH~~GIkVILD~V~NH~g~d~~~----~~g~~~~~~-~~- 616 (807)
+||+++. ++|||++.||++|||+|||.+||++||++||++||+||+|+|+||+|.++.. +...|+... +.
T Consensus 168 ~Pi~~~~~~~~~~~GY~~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~NH~~~~~~~~~~~p~~dw~~~~~~~~ 247 (601)
T 3edf_A 168 TPLVENDAAAYSYHGYAATDHYRIDPRYGSNEDFVRLSTEARKRGMGLIQDVVLSHIGKHHWWMKDLPTPDWINYGGKFV 247 (601)
T ss_dssp SCCEECCCSSSGGGCCSCSEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTSGGGGSCSSTTSBGGGGSCC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHCCCCCCEEECCCCC
T ss_conf 96524789888878858200054454479999999999999976998999977766677524665077667455079888
Q ss_pred -CCCCCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHH
Q ss_conf -78889765579998788--998777998899987888998899999999999999429259998344621089999999
Q 003613 617 -LNWDDRAVVADDPHFQG--RGNKSSGDNFHAAPNIDHSQDFVRKDIKEWLCWLRNEIGYDGWRLDFVRGFWGGYVKDYL 693 (807)
Q Consensus 617 -~~w~~~~~~~~~~~f~~--~g~~~~~~~~~~lPdln~~np~V~~~i~~~l~~Wi~~~GVDGfRLDaA~~f~~~~i~~i~ 693 (807)
..|.. ....+++... ...++.+|+...+||||+.||+|+++|++++++|++++||||||||++++++.++++++.
T Consensus 248 ~~~~~~--~~~~d~~~~~~~~~~~~~~wf~~~lpdLN~~np~V~~~l~~~~~~Wi~~~GVDGfRlD~~~~~~~~f~~~~~ 325 (601)
T 3edf_A 248 PTQHHR--VAVQDPYAAQADSENFTKGWFVEGMPDLNQTNPLVANYLIQNNIWWIEYAGLSGLRIDTYGYSDGAFLTEYT 325 (601)
T ss_dssp BCCCCG--GGGGCTTCCHHHHHHHHHSBSSTTSCBBCTTSHHHHHHHHHHHHHHHHHHTCSEEEESSGGGSCHHHHHHHH
T ss_pred CCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHH
T ss_conf 876655--544589876123654435535466661133997999999999999986259778996064557889999999
Q ss_pred HHC----CCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-------CCCCCEECCHHHHHHHHHHHHCCC----H
Q ss_conf 832----9948992333697764344553224668999999862-------599710002024899999760173----0
Q 003613 694 EAT----EPYFAVGEYWDSLSYTYGEMDHNQDAHRQRIIDWINA-------ASGTAGAFDVTTKGILHSALDRCE----Y 758 (807)
Q Consensus 694 ~~~----~~~~lvGE~w~~~~~~~G~~~y~~~~~~~~i~~yl~~-------~~~l~svfDfpl~~~L~~al~~~~----~ 758 (807)
+++ ++++++||+|.... ..+..|..+ ..+++++|||+++..+..++.+++ .
T Consensus 326 ~~v~~~~p~~~~vgE~~~~~~--------------~~~~~~~~~~~~~~~~~~~l~~v~nf~~~~~l~~~~~~~~~~~~~ 391 (601)
T 3edf_A 326 RRLMAEYPRLNMVGQEWSTRV--------------PVVARWQRGKANFDGYTSHLPSLMDFPLVDAMRNALSKTGEENGL 391 (601)
T ss_dssp HHHHHHCTTCEEEECCCCSCH--------------HHHHTTSTTCCCTTCCCCCCCEEBCHHHHHHHHHHHHCTTSSSTT
T ss_pred HHHHHHCCCEEEEEEECCCCH--------------HHHHHHHCCCCCCCCCCCCCCEEECHHHHHHHHHHHHCCCHHHHH
T ss_conf 999875898279840037866--------------777666246422333245687477708999999998356345679
Q ss_pred HHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCC
Q ss_conf 121200299999757687852110534577888888
Q 003613 759 WRLSDEKGKPPGVVGWWPSRAVTFIENHDTGSTQVR 794 (807)
Q Consensus 759 ~~l~~~~~~~~~l~~~~P~~av~FieNHDt~R~~~~ 794 (807)
.++.+.... ......+..+++|++|||++|+.+.
T Consensus 392 ~~l~~~~~~--~~~~~~~~~~~~fl~NHD~~R~~s~ 425 (601)
T 3edf_A 392 NEVYETLSL--DYLYPEPQNLVLFGGNHDMARMFSA 425 (601)
T ss_dssp HHHHHHHGG--GGGSSCGGGSEEESCCTTSCCHHHH
T ss_pred HHHHHHHHH--HCCCCCCCCEEEEECCCCCCCCHHH
T ss_conf 999998765--2246783304775126788873020
No 4
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=1.00 E-value=1 Score=386.52 Aligned_cols=284 Identities=18% Similarity=0.280 Sum_probs=203.0
Q ss_pred HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEC
Q ss_conf 11321000111354555300001136899999999997641346300103479999839999996999998599999979
Q 003613 468 LAAEAYSIFRTTAPTFFEEAAVELEESKPPAKISPGTGTGFEILCQGFNWESHKSGRWYMELKEKATELSSLGFSVIWLP 547 (807)
Q Consensus 468 ~pav~YqIFp~~~drF~~~~~~~~~~~~p~~~~~~~~~~~~~i~~~~F~Wd~~~~Ggdl~gI~ekLdYLk~LGvt~IyL~ 547 (807)
.-+++||||| +||..++....+ .. .+.+.........|. ||+|+||+++|||||+||||+|||+
T Consensus 129 ~~~viYqi~~---~~F~~~~~~~~~----~~---~~~w~~~~~~~~~~~------~Gd~~gi~~~LdyLk~LGvt~I~L~ 192 (583)
T 1ea9_C 129 KDAIFYQIFP---ERFANGDTRNDP----EG---TLPWGSADPTPSCFF------GGDLQGVIDHLDHLSKLGVNAVYFT 192 (583)
T ss_dssp HHCCCCEECS---TTSCCCCSCSCS----SC---CSCCCSSSCCCSSCC------CCCHHHHHHTHHHHHHHTCSEEEEC
T ss_pred CCCEEEEECH---HHHCCCCCCCCC----CC---CCCCCCCCCCCCCCC------CCCHHHHHHHHHHHHHCCCCEEEEC
T ss_conf 3665999862---775689976676----55---565567788656667------8699999984589987599889979
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCC-----CCCCCCCCCCCCCCCCC
Q ss_conf 9788899999985447755899999999999999998859699996730444456676-----79853236996788897
Q 003613 548 PPTESVSPEGYMPRDLYNLSSRYGNIDELKDVVNKFHDVGMKILGDVVLNHRCAHYQN-----QNGVWNIFGGRLNWDDR 622 (807)
Q Consensus 548 PIfe~~s~hgYd~~Dy~~IDp~lGt~edfk~LV~aaH~~GIkVILD~V~NH~g~d~~~-----~~g~~~~~~~~~~w~~~ 622 (807)
|||+++++|||++.||++|||+|||.+||++||++||++||+||||+|+||++.++.. +++...++.+++.|...
T Consensus 193 Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~~~~~f~~~~~~g~~s~y~~~y~~~~~ 272 (583)
T 1ea9_C 193 PLFKATTNHKYDTEDYFQIDPQFGDKDTLKKLVDLCHERGIRVLLDAVFNHSGRTFPPFVDVLKNGEKSKYKDWFHIRSL 272 (583)
T ss_dssp CCSSCSSSSTTSCSCTTCCCTTTCCHHHHHHHHHHHTTTTCEEEEECCCSBCCTTTHHHHHHHTTTTTCTTTTSSCBCSS
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCEEECCC
T ss_conf 87668888996865524347124999999999999998899999997466677766879998745889976672574688
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHC---C-C
Q ss_conf 65579998788998777998899987888998899999999999999429259998344621089999999832---9-9
Q 003613 623 AVVADDPHFQGRGNKSSGDNFHAAPNIDHSQDFVRKDIKEWLCWLRNEIGYDGWRLDFVRGFWGGYVKDYLEAT---E-P 698 (807)
Q Consensus 623 ~~~~~~~~f~~~g~~~~~~~~~~lPdln~~np~V~~~i~~~l~~Wi~~~GVDGfRLDaA~~f~~~~i~~i~~~~---~-~ 698 (807)
.. ...+ ..+++..+++...+|++|+.||+|+++|++++++|++++||||||||+++++..+|++++.+++ + +
T Consensus 273 ~~-~~~~---~~~~y~~~~~~~~~pdln~~~p~Vr~~l~~~~~~W~~~~gvDGfR~D~~~~~~~~f~~~~~~~v~~~~p~ 348 (583)
T 1ea9_C 273 PL-EVVD---GIPTYDTFAFEPLMPKLNTEHPDVKEYLLKAAEYWIRETGIDGWRLDVANEVSHQFWREFRRVVKQANPD 348 (583)
T ss_dssp SC-CCTT---SCCSBCBSSSCTTSBBCCTTSHHHHHHHHHHHHHHHHHHCCSEEEETTCTTSCHHHHHHHHHHHHHHCTT
T ss_pred CC-CCCC---CCCCCEECCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCC
T ss_conf 88-7888---8877301588788562033999999999999999988639609995651338999999999999866879
Q ss_pred CEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHCCC--HHHHHHCCCCCCCCCCCCC
Q ss_conf 48992333697764344553224668999999862599710002024899999760173--0121200299999757687
Q 003613 699 YFAVGEYWDSLSYTYGEMDHNQDAHRQRIIDWINAASGTAGAFDVTTKGILHSALDRCE--YWRLSDEKGKPPGVVGWWP 776 (807)
Q Consensus 699 ~~lvGE~w~~~~~~~G~~~y~~~~~~~~i~~yl~~~~~l~svfDfpl~~~L~~al~~~~--~~~l~~~~~~~~~l~~~~P 776 (807)
++++||+|.... .|+. +.+++++|||+++..+..++.+.. ...+...+... ...++
T Consensus 349 ~~~igE~~~~~~------------------~~~~-~~~~d~~~n~~~~~~~~~~~~~~~~~~~~~~~~l~~~---~~~~~ 406 (583)
T 1ea9_C 349 AYILGEVWHESS------------------IWLE-GDQFDAVMNYPFTNAVLDFFIHQIADAEKFSFMLGKQ---LAGYP 406 (583)
T ss_dssp CEEEECCCSCCT------------------TTTT-TTSCSEEBCHHHHHHHHHHTTSCCSCHHHHHHHHHHT---TTTSC
T ss_pred EEEEEEECCCHH------------------HHHC-CCCCCEEECHHHHHHHHHHHCCCCCCHHHHHHHHHHH---HHHCC
T ss_conf 599998738738------------------8866-8985888777999999999727998999999999999---98754
Q ss_pred ----CCCEECCCCCCCCCCCC
Q ss_conf ----85211053457788888
Q 003613 777 ----SRAVTFIENHDTGSTQV 793 (807)
Q Consensus 777 ----~~av~FieNHDt~R~~~ 793 (807)
..+++|++|||+.|+..
T Consensus 407 ~~~~~~~~~~~~nHD~~r~~~ 427 (583)
T 1ea9_C 407 RQASEVMFNLLDSHDTARLLT 427 (583)
T ss_dssp HHHHHTCEECSCCTTSCCHHH
T ss_pred HHHHHHHEEECCCCCCHHHHH
T ss_conf 044433215247888415666
No 5
>2guy_A Alpha-amylase A; (beta-alpha) 8 barrel, hydrolase; HET: NAG BMA; 1.59A {Aspergillus oryzae} SCOP: b.71.1.1 c.1.8.1 PDB: 2gvy_A* 3kwx_A* 6taa_A 7taa_A* 2taa_A
Probab=1.00 E-value=1 Score=386.31 Aligned_cols=282 Identities=21% Similarity=0.337 Sum_probs=200.2
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEECC
Q ss_conf 13210001113545553000011368999999999976413463001034799998399999969999985999999799
Q 003613 469 AAEAYSIFRTTAPTFFEEAAVELEESKPPAKISPGTGTGFEILCQGFNWESHKSGRWYMELKEKATELSSLGFSVIWLPP 548 (807)
Q Consensus 469 pav~YqIFp~~~drF~~~~~~~~~~~~p~~~~~~~~~~~~~i~~~~F~Wd~~~~Ggdl~gI~ekLdYLk~LGvt~IyL~P 548 (807)
.+++||||| +||.+++.... ++. + ...+.|. ||+|+||+++|||||+||||+|||+|
T Consensus 8 ~~~iYqi~~---~~F~~~~~~~~----~~~-----~-----~~~~~~~------gG~~~gi~~~LdyL~~lGvt~I~l~P 64 (478)
T 2guy_A 8 SQSIYFLLT---DRFARTDGSTT----ATC-----N-----TADQKYC------GGTWQGIIDKLDYIQGMGFTAIWITP 64 (478)
T ss_dssp TCCEEEECH---HHHCBTTCCSS----CCC-----C-----GGGTCCC------CBCHHHHHHTHHHHHTTTCCEEEECC
T ss_pred CCCEEEEEC---CCCCCCCCCCC----CCC-----C-----CCCCCCC------CCCHHHHHHHHHHHHHCCCCEEEECC
T ss_conf 585799943---32357998878----778-----8-----7656517------98899999988999866998899587
Q ss_pred CCCCC--------CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCC---CCC
Q ss_conf 78889--------9999985447755899999999999999998859699996730444456676798532369---967
Q 003613 549 PTESV--------SPEGYMPRDLYNLSSRYGNIDELKDVVNKFHDVGMKILGDVVLNHRCAHYQNQNGVWNIFG---GRL 617 (807)
Q Consensus 549 Ife~~--------s~hgYd~~Dy~~IDp~lGt~edfk~LV~aaH~~GIkVILD~V~NH~g~d~~~~~g~~~~~~---~~~ 617 (807)
|+++. ++|||++.|||+|||+|||.+||++||++||++||+||+|+|+||++.++......|..+. ...
T Consensus 65 i~~~~~~~~~~~~~~~GY~~~d~~~idp~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~~~~~~~~d~~~~~~~~~~~ 144 (478)
T 2guy_A 65 VTAQLPQTTAYGDAYHGYWQQDIYSLNENYGTADDLKALSSALHERGMYLMVDVVANHMGYDGAGSSVDYSVFKPFSSQD 144 (478)
T ss_dssp CEEECCCCBTTBCCTTSCSEEEEEEECTTSCCHHHHHHHHHHHHHTTCEEEEEECCSBCCEEBCGGGCCGGGSBSCCSGG
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 52577666677877788785663334745799999999999999889989999786667788876655632347788510
Q ss_pred CCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHH
Q ss_conf 88897655799987889---987779988999878889988999999999999994292599983446210899999998
Q 003613 618 NWDDRAVVADDPHFQGR---GNKSSGDNFHAAPNIDHSQDFVRKDIKEWLCWLRNEIGYDGWRLDFVRGFWGGYVKDYLE 694 (807)
Q Consensus 618 ~w~~~~~~~~~~~f~~~---g~~~~~~~~~~lPdln~~np~V~~~i~~~l~~Wi~~~GVDGfRLDaA~~f~~~~i~~i~~ 694 (807)
.+...... ..|... ..++.+.+...+|+||+.||+|+++|++++++|++++||||||||++++++.+|++++.+
T Consensus 145 ~~~~~~~~---~~~~~~~~~~~~w~g~~~~~~~dln~~~~~V~~~l~~~~~~w~~~~gvDGfR~Da~~~~~~~f~~~~~~ 221 (478)
T 2guy_A 145 YFHPFCFI---QNYEDQTQVEDCWLGDNTVSLPDLDTTKDVVKNEWYDWVGSLVSNYSIDGLRIDTVKHVQKDFWPGYNK 221 (478)
T ss_dssp GBCCSCBC---CCTTCHHHHHHSBEECSSEEECBBCTTSHHHHHHHHHHHHHHHHHHTCCEEEETTGGGSCGGGHHHHHH
T ss_pred HCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHH
T ss_conf 04788755---578887643101004777888801769999999999999999985499889996525589899999985
Q ss_pred HCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHC--CCHHHHHHCCCCCCCCC
Q ss_conf 3299489923336977643445532246689999998625997100020248999997601--73012120029999975
Q 003613 695 ATEPYFAVGEYWDSLSYTYGEMDHNQDAHRQRIIDWINAASGTAGAFDVTTKGILHSALDR--CEYWRLSDEKGKPPGVV 772 (807)
Q Consensus 695 ~~~~~~lvGE~w~~~~~~~G~~~y~~~~~~~~i~~yl~~~~~l~svfDfpl~~~L~~al~~--~~~~~l~~~~~~~~~l~ 772 (807)
+ ++++++||+|... ...+..|. ++++++|||+++..+..++.. ++...+.+....... .
T Consensus 222 ~-~~~~~igE~~~~~--------------~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~ 282 (478)
T 2guy_A 222 A-AGVYCIGEVLDGD--------------PAYTCPYQ---NVMDGVLNYPIYYPLLNAFKSTSGSMDDLYNMINTVKS-D 282 (478)
T ss_dssp H-HTSEEEECCCCSC--------------HHHHGGGG---GTSSEEBCHHHHHHHHHHHSSTTCCHHHHHHHHHHHHH-H
T ss_pred C-CCCEEEEEECCCC--------------CHHHHHHH---CCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH-H
T ss_conf 5-7956995564788--------------46677553---44753017177999999997179999999999999986-6
Q ss_pred CCCCCCCEECCCCCCCCCCCCCC
Q ss_conf 76878521105345778888888
Q 003613 773 GWWPSRAVTFIENHDTGSTQVRS 795 (807)
Q Consensus 773 ~~~P~~av~FieNHDt~R~~~~~ 795 (807)
...+..+++|++|||+.|+.+.+
T Consensus 283 ~~~~~~~~~f~~nHD~~r~~~~~ 305 (478)
T 2guy_A 283 CPDSTLLGTFVENHDNPRFASYT 305 (478)
T ss_dssp SSCGGGSEECSCCTTSCCGGGTC
T ss_pred CCCHHHCEEECCCCCCCCCCCCC
T ss_conf 76813300155689972002346
No 6
>4aef_A Neopullulanase (alpha-amylase II); hydrolase, thermostability, high temperature; 2.34A {Pyrococcus furiosus}
Probab=1.00 E-value=1 Score=385.97 Aligned_cols=278 Identities=20% Similarity=0.256 Sum_probs=196.9
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 21132100011135455530000113689999999999764134630010347999983999999699999859999997
Q 003613 467 KLAAEAYSIFRTTAPTFFEEAAVELEESKPPAKISPGTGTGFEILCQGFNWESHKSGRWYMELKEKATELSSLGFSVIWL 546 (807)
Q Consensus 467 ~~pav~YqIFp~~~drF~~~~~~~~~~~~p~~~~~~~~~~~~~i~~~~F~Wd~~~~Ggdl~gI~ekLdYLk~LGvt~IyL 546 (807)
-.-+|+||||| +||++++..+.. ..+ ...|. ||||+||++||||||+||||+|||
T Consensus 204 ~~~aViYqI~p---~~F~~~~~~~g~---~~~-------------~~~~~------gGdl~Gi~~kLdYLk~LGvt~I~L 258 (645)
T 4aef_A 204 VIDRVFYQIMP---DKFARSRKIQGI---AYP-------------KDKYW------GGDLIGIKEKIDHLVNLGINAIYL 258 (645)
T ss_dssp GGGCCEEEECH---HHHCCCSSCC-------------------------C------CCCHHHHHHTHHHHHHHTCCEEEE
T ss_pred HCCCEEEEEEC---CHHCCCCCCCCC---CCC-------------CCCCC------CCCHHHHHHHHHHHHHCCCCEEEE
T ss_conf 70887999952---042489998753---677-------------67678------869999998369998769988997
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCC--------CCCCCCCCCCCCC
Q ss_conf 99788899999985447755899999999999999998859699996730444456676--------7985323699678
Q 003613 547 PPPTESVSPEGYMPRDLYNLSSRYGNIDELKDVVNKFHDVGMKILGDVVLNHRCAHYQN--------QNGVWNIFGGRLN 618 (807)
Q Consensus 547 ~PIfe~~s~hgYd~~Dy~~IDp~lGt~edfk~LV~aaH~~GIkVILD~V~NH~g~d~~~--------~~g~~~~~~~~~~ 618 (807)
+|||+++++|||++.||++|||+|||++||++||++||++||+||||+|+||+|.+|.. ..+.|. .++.
T Consensus 259 ~Pif~s~~~~GYd~~dy~~idp~~Gt~~df~~LV~~aH~~GI~VIlD~V~NHts~~h~wf~~~~~~~~~s~~~---d~y~ 335 (645)
T 4aef_A 259 TPIFSSLTYHGYDIVDYFHVARRLGGDRAFVDLLSELKRFDIKVILDGVFHHTSFFHPYFQDVVRKGENSSFK---NFYR 335 (645)
T ss_dssp CCCEEESSTTCSSEEEEEEECGGGTCHHHHHHHHHHHHHTTCEEEEEECCSBCCTTSHHHHHHHHHSTTCTTG---GGBC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCCCCCCC---CCCE
T ss_conf 9898798999958027775570029999999999986335888999951145666781055576528998755---5317
Q ss_pred CCCCCCCCC--------CCCCCC--------CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCC
Q ss_conf 889765579--------998788--------9987779988999878889988999999999999994292599983446
Q 003613 619 WDDRAVVAD--------DPHFQG--------RGNKSSGDNFHAAPNIDHSQDFVRKDIKEWLCWLRNEIGYDGWRLDFVR 682 (807)
Q Consensus 619 w~~~~~~~~--------~~~f~~--------~g~~~~~~~~~~lPdln~~np~V~~~i~~~l~~Wi~~~GVDGfRLDaA~ 682 (807)
|........ ...+.. ...+..+.+...+|+||+.||+|++++.+++++|+ ++||||||+|+++
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~y~~~~~~~~~pdLn~~np~V~~~~~~~~~~Wl-~~gvDGfR~D~a~ 414 (645)
T 4aef_A 336 IIKFPVVSKEFLQILHSKSSWEEKYKKIKSLGWNYESFFSVWIMPRLNHDNPKVREFIKNVILFWT-NKGVDGFRMDVAH 414 (645)
T ss_dssp BSSSSCSCTTHHHHHHHSCGGGTTHHHHHHHCCSBCEETTEEEEEBBCTTSHHHHHHHHHHHHHHH-HTTCCEEEETTGG
T ss_pred ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH-HCCCCEEEECCCC
T ss_conf 246887654456556888654335565565563201234545676434369899999998877787-5498778763313
Q ss_pred CHHHHHHHHHHHHCCC-CEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHCCCH--H
Q ss_conf 2108999999983299-489923336977643445532246689999998625997100020248999997601730--1
Q 003613 683 GFWGGYVKDYLEATEP-YFAVGEYWDSLSYTYGEMDHNQDAHRQRIIDWINAASGTAGAFDVTTKGILHSALDRCEY--W 759 (807)
Q Consensus 683 ~f~~~~i~~i~~~~~~-~~lvGE~w~~~~~~~G~~~y~~~~~~~~i~~yl~~~~~l~svfDfpl~~~L~~al~~~~~--~ 759 (807)
+++.++++.+.++.++ .+++||+|++... ++ ...+++++|++++..+..++..... .
T Consensus 415 ~i~~~f~~~~~~~~~~~~~~~gE~~~~~~~------------------~~--~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 474 (645)
T 4aef_A 415 GVPPEVWKEVREALPKEKYLIGEVMDDARL------------------WL--FDKFHGVMNYRLYDAILRFFGYEEITAE 474 (645)
T ss_dssp GSCHHHHHHHHHHSCTTCEEEECCCSCCGG------------------GT--TTTCSEEBCHHHHHHHHHHTTSCCSCHH
T ss_pred CCCHHHHHHHHHHHHCCCCCCCCCCCCCHH------------------HH--CCCCCEECCHHHHHHHHHHHHCCCCCHH
T ss_conf 562567898775430134432211353122------------------20--2333300034677778876411543067
Q ss_pred HHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCC
Q ss_conf 2120029999975768785211053457788888
Q 003613 760 RLSDEKGKPPGVVGWWPSRAVTFIENHDTGSTQV 793 (807)
Q Consensus 760 ~l~~~~~~~~~l~~~~P~~av~FieNHDt~R~~~ 793 (807)
.+..............+..+++|++|||+.|+..
T Consensus 475 ~~~~~~~~~~~~~~~~~~~~~~fl~nHD~~R~~s 508 (645)
T 4aef_A 475 EFLNELELLSSYYGPAEYLMYNFLDNHDVERFLD 508 (645)
T ss_dssp HHHHHHHHHHHHHGGGGGGCBCCSCCTTSCCHHH
T ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 7777888776413531000133557788766343
No 7
>2aaa_A Alpha-amylase; glycosidase; 2.10A {Aspergillus niger} SCOP: b.71.1.1 c.1.8.1
Probab=1.00 E-value=1 Score=383.26 Aligned_cols=282 Identities=20% Similarity=0.296 Sum_probs=201.7
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEECC
Q ss_conf 13210001113545553000011368999999999976413463001034799998399999969999985999999799
Q 003613 469 AAEAYSIFRTTAPTFFEEAAVELEESKPPAKISPGTGTGFEILCQGFNWESHKSGRWYMELKEKATELSSLGFSVIWLPP 548 (807)
Q Consensus 469 pav~YqIFp~~~drF~~~~~~~~~~~~p~~~~~~~~~~~~~i~~~~F~Wd~~~~Ggdl~gI~ekLdYLk~LGvt~IyL~P 548 (807)
.+++||||| +||..++.... ++ .+.. .+.|. ||+|+||+++|||||+||||+|||+|
T Consensus 8 ~~viYqi~~---~~F~~~~~~~~----~~-----~~~~-----~~~~~------gG~~~gi~~~LdyL~~LGv~~I~l~P 64 (484)
T 2aaa_A 8 TQSIYFLLT---DRFGRTDNSTT----AT-----CNTG-----NEIYC------GGSWQGIIDHLDYIEGMGFTAIWISP 64 (484)
T ss_dssp TCCEEECCH---HHHCCTTCCSC----CC-----CCGG-----GCSCC------CCCHHHHHHTHHHHHTTTCCEEEECC
T ss_pred CCCEEEEEC---CCCCCCCCCCC----CC-----CCCC-----CCCCC------CCCHHHHHHHHHHHHHCCCCEEEECC
T ss_conf 185799957---50357998888----88-----8865-----46537------97899999987999866998899686
Q ss_pred CCCCC--------CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCC---CC
Q ss_conf 78889--------99999854477558999999999999999988596999967304444566767985323699---67
Q 003613 549 PTESV--------SPEGYMPRDLYNLSSRYGNIDELKDVVNKFHDVGMKILGDVVLNHRCAHYQNQNGVWNIFGG---RL 617 (807)
Q Consensus 549 Ife~~--------s~hgYd~~Dy~~IDp~lGt~edfk~LV~aaH~~GIkVILD~V~NH~g~d~~~~~g~~~~~~~---~~ 617 (807)
|+++. ++|||++.||++|||+|||.+||++||++||++||+||||+|+||++.++..+...|+.+.. ..
T Consensus 65 i~~~~~~~~~~~~~~~GY~~~dy~~id~~~Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~~~~~~~~d~~~~~~~~~~~ 144 (484)
T 2aaa_A 65 ITEQLPQDTADGEAYHGYWQQKIYDVNSNFGTADNLKSLSDALHARGMYLMVDVVPDHMGYAGNGNDVDYSVFDPFDSSS 144 (484)
T ss_dssp CEEECCCCBTTBCSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHTTTCEEEEEECCSBCCBSSCGGGCCGGGSBSCCSGG
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 20376665566777788685353454734599999999999999889989999776776788888766611026677644
Q ss_pred CCCCCCCCCCCCCCCCC---CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHH
Q ss_conf 88897655799987889---987779988999878889988999999999999994292599983446210899999998
Q 003613 618 NWDDRAVVADDPHFQGR---GNKSSGDNFHAAPNIDHSQDFVRKDIKEWLCWLRNEIGYDGWRLDFVRGFWGGYVKDYLE 694 (807)
Q Consensus 618 ~w~~~~~~~~~~~f~~~---g~~~~~~~~~~lPdln~~np~V~~~i~~~l~~Wi~~~GVDGfRLDaA~~f~~~~i~~i~~ 694 (807)
.+...... ..|... ..++.+.+...+|+||+.||+|+++|++++++|++++||||||||++++++.+|++++.+
T Consensus 145 ~~~~~~~~---~~~~~~~~~~~~w~~~~~~~~~dln~~np~v~~~l~~~~~~w~~~~gvDGfR~D~~~~i~~~f~~~~~~ 221 (484)
T 2aaa_A 145 YFHPYCLI---TDWDNLTMVEDCWEGDTIVSLPDLDTTETAVRTIWYDWVADLVSNYSVDGLRIDSVLEVQPDFFPGYNK 221 (484)
T ss_dssp GBCCCCBC---CCTTCHHHHHHSBEECSSSEECBBCTTSHHHHHHHHHHHHHHHHHHTCCEEEESCSTTSCGGGHHHHHH
T ss_pred CCCCCCCC---CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHH
T ss_conf 46887774---668887664332015676666753538989999999999999986699899732503499999999983
Q ss_pred HCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHC--CCHHHHHHCCCCCCCCC
Q ss_conf 3299489923336977643445532246689999998625997100020248999997601--73012120029999975
Q 003613 695 ATEPYFAVGEYWDSLSYTYGEMDHNQDAHRQRIIDWINAASGTAGAFDVTTKGILHSALDR--CEYWRLSDEKGKPPGVV 772 (807)
Q Consensus 695 ~~~~~~lvGE~w~~~~~~~G~~~y~~~~~~~~i~~yl~~~~~l~svfDfpl~~~L~~al~~--~~~~~l~~~~~~~~~l~ 772 (807)
+ ++++++||+|... ...+..|. ++++++|||+++..+..++.. ++...+......... .
T Consensus 222 ~-~~~~~igE~~~~~--------------~~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~-~ 282 (484)
T 2aaa_A 222 A-SGVYCVGEIDNGN--------------PASDCPYQ---KVLDGVLNYPIYWQLLYAFESSSGSISNLYNMIKSVAS-D 282 (484)
T ss_dssp H-HTSEEEECCCCSC--------------HHHHGGGG---GTSSEEBCHHHHHHHHHHHSSTTSCHHHHHHHHHHHHH-H
T ss_pred C-CCCEEEECCCCCC--------------HHHHHHHC---CCCCCEECCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH-H
T ss_conf 6-8968981677887--------------17787642---66875545177999999997389999999999999987-5
Q ss_pred CCCCCCCEECCCCCCCCCCCCCC
Q ss_conf 76878521105345778888888
Q 003613 773 GWWPSRAVTFIENHDTGSTQVRS 795 (807)
Q Consensus 773 ~~~P~~av~FieNHDt~R~~~~~ 795 (807)
...+..+++|++|||+.|+...+
T Consensus 283 ~~~~~~~~~f~~nHD~~r~~~~~ 305 (484)
T 2aaa_A 283 CSDPTLLGNFIENHDNPRFAKYT 305 (484)
T ss_dssp CSCGGGSEECSCCTTSCCGGGTC
T ss_pred CCCHHHHCEECCCCCCCCCCCCC
T ss_conf 77801201024378831113245
No 8
>1cyg_A Cyclodextrin glucanotransferase; glycosyltransferase; 2.50A {Geobacillus stearothermophilus} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1
Probab=1.00 E-value=1 Score=382.83 Aligned_cols=290 Identities=20% Similarity=0.328 Sum_probs=198.1
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHH--HHHHCCCCEEEE
Q ss_conf 132100011135455530000113689999999999764134630010347999983999999699--999859999997
Q 003613 469 AAEAYSIFRTTAPTFFEEAAVELEESKPPAKISPGTGTGFEILCQGFNWESHKSGRWYMELKEKAT--ELSSLGFSVIWL 546 (807)
Q Consensus 469 pav~YqIFp~~~drF~~~~~~~~~~~~p~~~~~~~~~~~~~i~~~~F~Wd~~~~Ggdl~gI~ekLd--YLk~LGvt~IyL 546 (807)
.+++||||| +||.+++..+.+ +...+.+... -.+.|. ||+|+||+++|| ||++||||+|||
T Consensus 11 ~~viYqI~p---~rF~d~~~~n~~----~~~~~~~~~~----~~~~~~------gGdl~gi~~kLd~~yLk~LGv~aIwL 73 (680)
T 1cyg_A 11 SDVVYQIVV---DRFVDGNTSNNP----SGALFSSGCT----NLRKYC------GGDWQGIINKINDGYLTDMGVTAIWI 73 (680)
T ss_dssp TCCEEEECG---GGTCCSCGGGCC----CGGGBCGGGC----STTSBC------CCCHHHHHHHHHTSTTTTTTCCEEEE
T ss_pred CCEEEEEEC---CCCCCCCCCCCC----CCCCCCCCCC----CCCCCC------CCCHHHHHHHCCHHHHHHCCCCEEEE
T ss_conf 450999965---403589977687----8764577766----546456------86899998655788898679888996
Q ss_pred CCCCCC-----------CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCCCC
Q ss_conf 997888-----------999999854477558999999999999999988596999967304444566767985323699
Q 003613 547 PPPTES-----------VSPEGYMPRDLYNLSSRYGNIDELKDVVNKFHDVGMKILGDVVLNHRCAHYQNQNGVWNIFGG 615 (807)
Q Consensus 547 ~PIfe~-----------~s~hgYd~~Dy~~IDp~lGt~edfk~LV~aaH~~GIkVILD~V~NH~g~d~~~~~g~~~~~~~ 615 (807)
+|||++ .++|||++.||++|||+|||++||++||++||++||+||||+|+||++..+... ..|...+.
T Consensus 74 ~Pi~~~~~~~~~~~~g~~~~~GY~~~Dy~~idp~~Gt~~df~~Lv~~aH~~GIkVilD~V~NHts~~~~~~-~~~~~~~~ 152 (680)
T 1cyg_A 74 SQPVENVFSVMNDASGSASYHGYWARDFKKPNPFFGTLSDFQRLVDAAHAKGIKVIIDFAPNHTSPASETN-PSYMENGR 152 (680)
T ss_dssp CCCEEECCCCCSSSSCCCSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECTTEEEECCSSC-TTSTTTTC
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC-CCHHHCCC
T ss_conf 86301765434566788777886702024547121999999999999997899899986787777422357-43221475
Q ss_pred CCCCCCCC----CCCC-CCCCCCCCC--C-----CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCC
Q ss_conf 67888976----5579-998788998--7-----7799889998788899889999999999999942925999834462
Q 003613 616 RLNWDDRA----VVAD-DPHFQGRGN--K-----SSGDNFHAAPNIDHSQDFVRKDIKEWLCWLRNEIGYDGWRLDFVRG 683 (807)
Q Consensus 616 ~~~w~~~~----~~~~-~~~f~~~g~--~-----~~~~~~~~lPdln~~np~V~~~i~~~l~~Wi~~~GVDGfRLDaA~~ 683 (807)
.|.+.. ...+ ..+|+..+. + ..+..+..+||||++||+|+++|++++++|+ ++||||||||+++|
T Consensus 153 --~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~y~~~~~~pDLn~~np~Vr~~i~~~~~~Wl-~~GVDGfRlDa~~~ 229 (680)
T 1cyg_A 153 --LYDNGTLLGGYTNDANMYFHHNGGTTFSSLEDGIYRNLFDLADLNHQNPVIDRYLKDAVKMWI-DMGIDGIRMDAVKH 229 (680)
T ss_dssp --EEETTEEEECSTTCTTCCBCCSCBCCCSSHHHHHSSBSTTEEEBCTTSHHHHHHHHHHHHHHH-TTTCCEEEESCGGG
T ss_pred --CCCCCCCCCCCCCCCHHCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH-HCCCCEEEEECCCC
T ss_conf --145763035667872201623899886777653345768888605499799999999999999-67998999703022
Q ss_pred HHHHHHHHHHHHC---CCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHCC--CH
Q ss_conf 1089999999832---994899233369776434455322466899999986259971000202489999976017--30
Q 003613 684 FWGGYVKDYLEAT---EPYFAVGEYWDSLSYTYGEMDHNQDAHRQRIIDWINAASGTAGAFDVTTKGILHSALDRC--EY 758 (807)
Q Consensus 684 f~~~~i~~i~~~~---~~~~lvGE~w~~~~~~~G~~~y~~~~~~~~i~~yl~~~~~l~svfDfpl~~~L~~al~~~--~~ 758 (807)
++.+|++++.+++ ++.+++||+|.+.. ..+ .....|.+. .+ .++|||++...++.++.+. ..
T Consensus 230 i~~~f~~~~~~~v~~~~~~~~vgE~~~~~~-----~~~------~~~~~~~~~-~~-~~~~df~~~~~~~~~~~~~~~~~ 296 (680)
T 1cyg_A 230 MPFGWQKSLMDEIDNYRPVFTFGEWFLSEN-----EVD------ANNHYFANE-SG-MSLLDFRFGQKLRQVLRNNSDNW 296 (680)
T ss_dssp SCSHHHHHHHHHHHHHCCCEEEECCCCCTT-----CCC------HHHHHHHHH-SS-CEEBCHHHHHHHHHHHTTCSCCH
T ss_pred CCHHHHHHHHHHHHHCCCCEEECCCCCCCC-----CCC------HHHHHHHCC-CC-CCEECCHHHHHHHHHHHCCCCCH
T ss_conf 899999999999863499289865778886-----220------456666225-88-72478058999999985689879
Q ss_pred HHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCC
Q ss_conf 12120029999975768785211053457788888
Q 003613 759 WRLSDEKGKPPGVVGWWPSRAVTFIENHDTGSTQV 793 (807)
Q Consensus 759 ~~l~~~~~~~~~l~~~~P~~av~FieNHDt~R~~~ 793 (807)
..+...+..... ....+..+++|++|||++|+..
T Consensus 297 ~~l~~~l~~~~~-~~~~~~~~~~fl~NHD~~R~~s 330 (680)
T 1cyg_A 297 YGFNQMIQDTAS-AYDEVLDQVTFIDNHDMDRFMI 330 (680)
T ss_dssp HHHHHHHHHHHH-HCTTGGGCEECSCCTTSCCSCC
T ss_pred HHHHHHHHHHHH-HCCCHHHCEEEECCCCCCHHCC
T ss_conf 999999999876-4435544167713799520053
No 9
>3bmv_A Cyclomaltodextrin glucanotransferase; glycosidase, thermostable, family 13 glycosyl hydrolas; 1.60A {Thermoanaerobacterium thermosulfurigenorganism_taxid} SCOP: b.1.18.2 b.3.1.1 b.71.1.1 c.1.8.1 PDB: 3bmw_A* 1ciu_A 1a47_A 1pj9_A* 1cgt_A
Probab=1.00 E-value=1 Score=380.84 Aligned_cols=289 Identities=21% Similarity=0.333 Sum_probs=198.1
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHH--HHHHCCCCEEEE
Q ss_conf 132100011135455530000113689999999999764134630010347999983999999699--999859999997
Q 003613 469 AAEAYSIFRTTAPTFFEEAAVELEESKPPAKISPGTGTGFEILCQGFNWESHKSGRWYMELKEKAT--ELSSLGFSVIWL 546 (807)
Q Consensus 469 pav~YqIFp~~~drF~~~~~~~~~~~~p~~~~~~~~~~~~~i~~~~F~Wd~~~~Ggdl~gI~ekLd--YLk~LGvt~IyL 546 (807)
.+++||||| +||..++..+.+ +...+.+.... .+.|. ||+|+||+++|| ||++||||+|||
T Consensus 14 ~~viYqi~~---~~F~d~~~~n~~----~~~~~dg~~~~----~~~~~------gGdl~gi~~kLd~~yLk~LGvtaIwL 76 (683)
T 3bmv_A 14 TDVIYQIVT---DRFVDGNTSNNP----TGDLYDPTHTS----LKKYF------GGDWQGIINKINDGYLTGMGVTAIWI 76 (683)
T ss_dssp TCCEEECCG---GGTCCCCGGGSC----CGGGBCTTSCS----TTSBC------CCCHHHHHHHHHTSTTGGGTCCEEEE
T ss_pred CCCEEEEEC---CCCCCCCCCCCC----CCCCCCCCCCC----CCCCC------CCCHHHHHHHCCHHHHHHCCCCEEEE
T ss_conf 575999815---534689977788----87656787665----56546------86999998755898998759988996
Q ss_pred CCCCCC-------------CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 997888-------------9999998544775589999999999999999885969999673044445667679853236
Q 003613 547 PPPTES-------------VSPEGYMPRDLYNLSSRYGNIDELKDVVNKFHDVGMKILGDVVLNHRCAHYQNQNGVWNIF 613 (807)
Q Consensus 547 ~PIfe~-------------~s~hgYd~~Dy~~IDp~lGt~edfk~LV~aaH~~GIkVILD~V~NH~g~d~~~~~g~~~~~ 613 (807)
+|||++ .++|||++.||++|||+|||++||++||++||++||+||||+|+||++.++... .|+..
T Consensus 77 ~Pi~~~~~~~~~~~g~~g~~~~~GYd~~dy~~idp~~Gt~~dfk~Lv~~aH~~GikVilD~V~NHts~~~~~~--~~~~~ 154 (683)
T 3bmv_A 77 PQPVENIYAVLPDSTFGGSTSYHGYWARDFKRTNPYFGSFTDFQNLINTAHAHNIKVIIDFAPNHTSPASETD--PTYAE 154 (683)
T ss_dssp CCCEEECCCCEEETTTEEECSTTSCSEEEEEEECTTTCCHHHHHHHHHHHHHTTCEEEEEECTTEEEECCSSC--TTSTT
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCC--CCHHC
T ss_conf 9641476554555445678777786734514257443999999999999998799899997546666432357--43010
Q ss_pred CCCCCCCCCC----CCCC-CCCCCCCCC--CC-----CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCC
Q ss_conf 9967888976----5579-998788998--77-----7998899987888998899999999999999429259998344
Q 003613 614 GGRLNWDDRA----VVAD-DPHFQGRGN--KS-----SGDNFHAAPNIDHSQDFVRKDIKEWLCWLRNEIGYDGWRLDFV 681 (807)
Q Consensus 614 ~~~~~w~~~~----~~~~-~~~f~~~g~--~~-----~~~~~~~lPdln~~np~V~~~i~~~l~~Wi~~~GVDGfRLDaA 681 (807)
.+. .|.+.. ...+ ..+|+..+. +. .+..+..+||||++||+|+++|++++++|+ ++||||||||++
T Consensus 155 ~g~-~~~~~~~~~~~~~~~~~~f~~~~~~~w~~~~~~~y~~~~~~pdLn~~np~Vr~~i~~~l~~Wl-~~GVDGfRlDa~ 232 (683)
T 3bmv_A 155 NGR-LYDNGTLLGGYTNDTNGYFHHYGGTDFSSYEDGIYRNLFDLADLNQQNSTIDSYLKSAIKVWL-DMGIDGIRLDAV 232 (683)
T ss_dssp TTC-EEETTEEEECSTTCTTCCBCCSCBCCCSSHHHHHHSBSTTEEEBCTTSHHHHHHHHHHHHHHH-HTTCCEEEESCG
T ss_pred CCC-CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH-HCCCCEEEEECC
T ss_conf 475-144773036677875451206899886776664525758888725499899999999999998-679978999531
Q ss_pred CCHHHHHHHHHHHHC---CCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHCC--
Q ss_conf 621089999999832---994899233369776434455322466899999986259971000202489999976017--
Q 003613 682 RGFWGGYVKDYLEAT---EPYFAVGEYWDSLSYTYGEMDHNQDAHRQRIIDWINAASGTAGAFDVTTKGILHSALDRC-- 756 (807)
Q Consensus 682 ~~f~~~~i~~i~~~~---~~~~lvGE~w~~~~~~~G~~~y~~~~~~~~i~~yl~~~~~l~svfDfpl~~~L~~al~~~-- 756 (807)
+|++.+|++++.+.+ ++.+++||+|....- .+ .....|.+. .+ .++|||+++..++.++.+.
T Consensus 233 ~~i~~~f~~~~~~~v~~~~~~~~vgE~~~~~~~-----~~------~~~~~~~~~-~~-~~~~df~~~~~l~~~~~~~~~ 299 (683)
T 3bmv_A 233 KHMPFGWQKNFMDSILSYRPVFTFGEWFLGTNE-----ID------VNNTYFANE-SG-MSLLDFRFSQKVRQVFRDNTD 299 (683)
T ss_dssp GGSCHHHHHHHHHHHHHHSCCEEEECCCCCTTC-----CC------HHHHHHHHH-SS-SEEBCHHHHHHHHHHHTSCSS
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEECCCCCCCCC-----CC------HHHHHHHCC-CC-CCEECCHHHHHHHHHHHCCCC
T ss_conf 139989999999999736994497556678862-----20------345554026-88-726780689999999855897
Q ss_pred CHHHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCC
Q ss_conf 301212002999997576878521105345778888
Q 003613 757 EYWRLSDEKGKPPGVVGWWPSRAVTFIENHDTGSTQ 792 (807)
Q Consensus 757 ~~~~l~~~~~~~~~l~~~~P~~av~FieNHDt~R~~ 792 (807)
....+...+..... ....+..+++|++|||++|+.
T Consensus 300 ~~~~l~~~l~~~~~-~~~~~~~~~~fl~NHD~~R~~ 334 (683)
T 3bmv_A 300 TMYGLDSMIQSTAS-DYNFINDMVTFIDNHDMDRFY 334 (683)
T ss_dssp CHHHHHHHHHHHHH-HCTTGGGCEECSCCSSSCCSC
T ss_pred CHHHHHHHHHHHHH-HCCCHHHCEEECCCCCCCCCC
T ss_conf 79999999999987-564623213263589974235
No 10
>2wc7_A Alpha amylase, catalytic region; CD/PUL-hydrolyzing enzymes, hydrolase, glycosidase, neopullu; 2.37A {Nostoc punctiforme} PDB: 2wcs_A 2wkg_A
Probab=1.00 E-value=1 Score=380.23 Aligned_cols=289 Identities=19% Similarity=0.301 Sum_probs=199.4
Q ss_pred HHHHHHHHHCCCCCCCCC-CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEE
Q ss_conf 521132100011135455-5300001136899999999997641346300103479999839999996999998599999
Q 003613 466 EKLAAEAYSIFRTTAPTF-FEEAAVELEESKPPAKISPGTGTGFEILCQGFNWESHKSGRWYMELKEKATELSSLGFSVI 544 (807)
Q Consensus 466 ~~~pav~YqIFp~~~drF-~~~~~~~~~~~~p~~~~~~~~~~~~~i~~~~F~Wd~~~~Ggdl~gI~ekLdYLk~LGvt~I 544 (807)
|-.-+|+||||| +|| +.++..+. +........+... ....+|. ||+|+||+++||||++||||+|
T Consensus 8 W~~~~viYqi~~---~~F~~~gd~~~d----~~~~~~~~~w~~~-~~~~~~~------~Gdl~gi~~~LdyL~~LGv~~I 73 (488)
T 2wc7_A 8 WVKHAVFYQIFP---DRFARSKQPRKR----LLQEARWEDWDSM-PTLQGYK------GGDLWGIMEDLDYIQNLGINAI 73 (488)
T ss_dssp HHHTCCEEEECG---GGTCCCSSCCCC----SCTTCCGGGGGGC-HHHHC-C------CCCHHHHHHTHHHHHHHTCCEE
T ss_pred CCCCCEEEEECC---CCCCCCCCCCCC----CCCCCCCCCCCCC-CCCCCCC------CCCHHHHHHHHHHHHHCCCCEE
T ss_conf 123655999863---410579996677----6655444555678-7657667------8699999984599997599989
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCC-----CCCCCCCCCCCCCC
Q ss_conf 9799788899999985447755899999999999999998859699996730444456676-----79853236996788
Q 003613 545 WLPPPTESVSPEGYMPRDLYNLSSRYGNIDELKDVVNKFHDVGMKILGDVVLNHRCAHYQN-----QNGVWNIFGGRLNW 619 (807)
Q Consensus 545 yL~PIfe~~s~hgYd~~Dy~~IDp~lGt~edfk~LV~aaH~~GIkVILD~V~NH~g~d~~~-----~~g~~~~~~~~~~w 619 (807)
||+|||+++++|||++.||++|||+|||.+||++||++||++||+||||+|+||++.++.. .++...++.+++.|
T Consensus 74 ~L~Pi~~~~~~~GYd~~dy~~idp~~Gt~~df~~Lv~~aH~~Gi~VilD~V~NH~s~~~~~f~~~~~~~~~s~y~~~y~~ 153 (488)
T 2wc7_A 74 YFTPIFQSASNHRYHTHDYYQVDPMLGGNEAFKELLDAAHQRNIKVVLDGVFNHSSRGFFFFHDVLENGPHSPWVNWFKI 153 (488)
T ss_dssp EESCCEEECTTCTTSEEEEEEECGGGTHHHHHHHHHHHHHHTTCEEEEEECCSBCCSSSHHHHHHHHHGGGCTTGGGBCB
T ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCCCCCCEEE
T ss_conf 98987778888997876756557124999999999999998899899996778677767879999854899987774562
Q ss_pred CCCCCCCCCCCCCC--CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHH-HHHHHHHH-
Q ss_conf 89765579998788--998777998899987888998899999999999999429259998344621089-99999983-
Q 003613 620 DDRAVVADDPHFQG--RGNKSSGDNFHAAPNIDHSQDFVRKDIKEWLCWLRNEIGYDGWRLDFVRGFWGG-YVKDYLEA- 695 (807)
Q Consensus 620 ~~~~~~~~~~~f~~--~g~~~~~~~~~~lPdln~~np~V~~~i~~~l~~Wi~~~GVDGfRLDaA~~f~~~-~i~~i~~~- 695 (807)
.... . ..+.+ ..++..+++...+|+||++||+|+++|++++++|+ ++||||||||+++++..+ +++++.+.
T Consensus 154 ~~~~--~--~~~~~~~~~~~~~~~~~~~~pdln~~np~vr~~i~~~~~~Wl-~~gvDGfR~D~~~~i~~~~~~~~~~~~~ 228 (488)
T 2wc7_A 154 EGWP--L--SPYNGEFPANYVGWAGNRALPEFNHDNPEVREYIMEIAEYWL-KFGIDGWRLDVPFEIKTPGFWQEFRDRT 228 (488)
T ss_dssp CSSS--C--CSSCTTSCCCBCBGGGCTTSBBBCTTSHHHHHHHHHHHHHHH-HHTCCEEEESSGGGCCCTTHHHHHHHHH
T ss_pred CCCC--C--CCCCCCCCCCCCCCCCCCCCCEECCCCHHHHHHHHHHHHHHH-HCCCCEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 5888--7--777777788765658988767015599999999999999999-7799999980525468689999999999
Q ss_pred --C-CCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEECCHHHHHHHHHHHHCCCH--------------
Q ss_conf --2-99489923336977643445532246689999998625997100020248999997601730--------------
Q 003613 696 --T-EPYFAVGEYWDSLSYTYGEMDHNQDAHRQRIIDWINAASGTAGAFDVTTKGILHSALDRCEY-------------- 758 (807)
Q Consensus 696 --~-~~~~lvGE~w~~~~~~~G~~~y~~~~~~~~i~~yl~~~~~l~svfDfpl~~~L~~al~~~~~-------------- 758 (807)
. ++.+++||+|.... .|+. ..+++++|+|+++..+..++.++..
T Consensus 229 ~~~~p~~~~vgE~~~~~~------------------~~~~-~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (488)
T 2wc7_A 229 KAINPEAYIVGEVWGDSR------------------QWLD-GTQFDGVMNYLFAGPTIAFAAGDRVVLEQVQSRDYQPYP 289 (488)
T ss_dssp HHHCTTCEEEECCCSCCG------------------GGCS-SSSCSEEEEHHHHHHHHHHHTGGGCCGGGCCTTTCCCCS
T ss_pred HHHCCCEEEEEEECCCCH------------------HHHC-CCCCCCEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 854898189998557717------------------7644-777582407158999999982576432112444444556
Q ss_pred ----HHHHHCCCCCCCCCCCCC----CCCEECCCCCCCCCCCCCC
Q ss_conf ----121200299999757687----8521105345778888888
Q 003613 759 ----WRLSDEKGKPPGVVGWWP----SRAVTFIENHDTGSTQVRS 795 (807)
Q Consensus 759 ----~~l~~~~~~~~~l~~~~P----~~av~FieNHDt~R~~~~~ 795 (807)
..+.... ......+| ..+++|++|||++|+...+
T Consensus 290 ~~~~~~~~~~~---~~~~~~~~~~~~~~~~~f~~nHD~~R~~~~~ 331 (488)
T 2wc7_A 290 PLFAAEYATKI---QEVLQLYPWEIQLTQLNLLASHDTARLMTIA 331 (488)
T ss_dssp CCCHHHHHHHH---HHHHTSSCHHHHTTCEECSCCTTSCCHHHHT
T ss_pred CCCHHHHHHHH---HHHHHHCCCHHHCCEEEECCCCCHHHHHHHC
T ss_conf 78999999999---9999865512101006753554455687763
Done!