BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>003615
MHVTGDLGFSILVLVVSFVFPAIALIIRRKWRRAVARKEEIKRLLILASEEAARAEFEAS
YGYSTTVYVPQHPQCAVCFSPTTTRCARCKAVRYCSGKCQIVHWRQGHKDECQPPSISHE
INDVGNFTSQKAAEPDQSEAYGDRFKFESKLPAKPIQMSSEESESSDRSSSSEVPQRKDD
EVEVEFHADGEGASCTYESSDASFSGFSASHTSSESSDDVSVCESIISNESEKLDGPLSA
DITLDMLDNALNVKKLEERKPLSPKFAKLVDSVDNFTKLNRFCETKPGCSGDLQCTPANS
LGLGASHMNVNAERSTVSSSFWGRTLEPKMDSCSDAALPDSNGASKSKLSDSRSSLLSSI
NESPSPSLPEKSPKANVFSPKIVHPAVLGNTRDTEGVVLMESTNMDAPEVKNSSSLNCKS
SSHAVNGTKSGSHVVKSGEVKSSVSLSSYGPPLSCVGRDSVCSNGLNISGGTSLRFEKSN
IVTNDIGSSSNFVGMPSVPSVRSERFDNVQRSSAMSAQIENSPSNVGNGLKTSLWKAVDQ
FRGSKSSKQCLSVGCETAGRYSDKGLFSYELFVKLYNWNKVELQPCGLINCGNSCYANVV
LQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGKSPLSPIGILSRLQSI
GSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLIGLTFGGYLRSKIKC
TKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKK
LTIVEAPNILTIALKRFQVFSPLPISF

High Scoring Gene Products

Symbol, full name Information P value
UBP16
AT4G24560
protein from Arabidopsis thaliana 7.2e-133
UBP17
AT5G65450
protein from Arabidopsis thaliana 5.5e-113
UBP18
AT4G31670
protein from Arabidopsis thaliana 4.0e-83
UBP19
AT2G24640
protein from Arabidopsis thaliana 4.0e-83
DDB_G0274827
putative ubiquitin carboxyl-terminal hydrolase (UCH)
gene from Dictyostelium discoideum 8.0e-42
Usp42
ubiquitin specific peptidase 42
protein from Mus musculus 9.0e-40
Usp42
ubiquitin specific peptidase 42
gene from Rattus norvegicus 9.0e-40
USP42
Ubiquitin carboxyl-terminal hydrolase 42
protein from Homo sapiens 1.2e-39
USP42
Ubiquitin carboxyl-terminal hydrolase
protein from Canis lupus familiaris 1.2e-39
USP42
Ubiquitin carboxyl-terminal hydrolase 42
protein from Bos taurus 1.2e-39
usp42
ubiquitin specific peptidase 42
gene_product from Danio rerio 8.1e-39
usp36
ubiquitin specific peptidase 36
gene_product from Danio rerio 4.5e-38
USP36
Ubiquitin carboxyl-terminal hydrolase 36
protein from Homo sapiens 7.8e-38
Usp36
ubiquitin specific peptidase 36
protein from Mus musculus 1.3e-37
USP36
Ubiquitin carboxyl-terminal hydrolase
protein from Bos taurus 1.3e-37
USP36
Ubiquitin carboxyl-terminal hydrolase
protein from Canis lupus familiaris 2.2e-37
USP36
Ubiquitin carboxyl-terminal hydrolase
protein from Sus scrofa 2.2e-37
USP42
Ubiquitin carboxyl-terminal hydrolase
protein from Gallus gallus 2.7e-37
UBP25
AT3G14400
protein from Arabidopsis thaliana 9.0e-34
USP17L6
Ubiquitin carboxyl-terminal hydrolase 17-like protein 6
protein from Homo sapiens 3.0e-33
Usp36
ubiquitin specific peptidase 36
gene from Rattus norvegicus 3.3e-33
USP17L13
Ubiquitin carboxyl-terminal hydrolase 17-like protein 13
protein from Homo sapiens 2.6e-32
USP17L12
Ubiquitin carboxyl-terminal hydrolase 17-like protein 12
protein from Homo sapiens 2.6e-32
USP17L21
Ubiquitin carboxyl-terminal hydrolase 17-like protein 21
protein from Homo sapiens 2.6e-32
USP17L13
Ubiquitin carboxyl-terminal hydrolase
protein from Homo sapiens 2.6e-32
LOC609437
Ubiquitin carboxyl-terminal hydrolase
protein from Canis lupus familiaris 3.1e-32
USP17L5
Ubiquitin carboxyl-terminal hydrolase 17-like protein 5
protein from Homo sapiens 8.7e-32
USP17L15
Ubiquitin carboxyl-terminal hydrolase 17-like protein 15
protein from Homo sapiens 8.7e-32
USP17L11
Ubiquitin carboxyl-terminal hydrolase 17-like protein 11
protein from Homo sapiens 8.7e-32
USP17L18
Ubiquitin carboxyl-terminal hydrolase 17-like protein 18
protein from Homo sapiens 8.7e-32
USP17L22
Ubiquitin carboxyl-terminal hydrolase 17-like protein 22
protein from Homo sapiens 8.7e-32
USP17L17
Ubiquitin carboxyl-terminal hydrolase 17-like protein 17
protein from Homo sapiens 8.7e-32
USP17L19
Ubiquitin carboxyl-terminal hydrolase 17-like protein 19
protein from Homo sapiens 8.7e-32
USP17L20
Ubiquitin carboxyl-terminal hydrolase 17-like protein 20
protein from Homo sapiens 8.7e-32
USP17L24
Ubiquitin carboxyl-terminal hydrolase 17-like protein 24
protein from Homo sapiens 8.7e-32
UBP23
AT5G57990
protein from Arabidopsis thaliana 1.4e-31
LOC609268
Ubiquitin carboxyl-terminal hydrolase
protein from Canis lupus familiaris 1.3e-30
USP17L10
Ubiquitin carboxyl-terminal hydrolase 17-like protein 10
protein from Homo sapiens 2.1e-30
LOC609310
Ubiquitin carboxyl-terminal hydrolase
protein from Canis lupus familiaris 2.2e-30
Usp17la
ubiquitin specific peptidase 17-like A
protein from Mus musculus 3.4e-30
LOC100686685
Uncharacterized protein
protein from Canis lupus familiaris 3.7e-30
USP17L2
Ubiquitin carboxyl-terminal hydrolase 17
protein from Homo sapiens 4.9e-30
USP17L8
Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 8
protein from Homo sapiens 2.0e-29
J9JHA0
Uncharacterized protein
protein from Canis lupus familiaris 6.9e-29
E2R279
Ubiquitin carboxyl-terminal hydrolase
protein from Canis lupus familiaris 3.7e-28
USP17L3
Ubiquitin carboxyl-terminal hydrolase 17-like protein 3
protein from Homo sapiens 3.9e-28
USP17L4
Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 4
protein from Homo sapiens 8.8e-28
USP17L1P
Putative ubiquitin carboxyl-terminal hydrolase 17-like protein 1
protein from Homo sapiens 2.6e-27
USP42
Ubiquitin carboxyl-terminal hydrolase 42
protein from Homo sapiens 6.3e-27
Usp17l5
ubiquitin specific peptidase 17-like 5
gene from Rattus norvegicus 1.7e-25
RGD1565607
similar to mouse deubiquitinating enzyme 6
gene from Rattus norvegicus 1.7e-25
USP12P1
Ubiquitin carboxyl-terminal hydrolase
protein from Gallus gallus 2.0e-25
LOC689730
similar to ubiquitin specific peptidase 17 (homolog)
gene from Rattus norvegicus 1.1e-24
USP42
Ubiquitin carboxyl-terminal hydrolase 42
protein from Homo sapiens 1.1e-24
Usp36
Ubiquitin carboxyl-terminal hydrolase 36
protein from Drosophila yakuba 1.9e-24
Usp36
Ubiquitin carboxyl-terminal hydrolase 36
protein from Drosophila simulans 2.1e-24
scny
scrawny
protein from Drosophila melanogaster 2.5e-24
Usp36
Ubiquitin carboxyl-terminal hydrolase 36
protein from Drosophila erecta 2.5e-24
USP17L7
Inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 7
protein from Homo sapiens 4.1e-24
USP46
Ubiquitin carboxyl-terminal hydrolase
protein from Bos taurus 5.1e-24
USP46
Ubiquitin carboxyl-terminal hydrolase 46
protein from Homo sapiens 5.1e-24
USP46
Uncharacterized protein
protein from Sus scrofa 5.1e-24
USP46
Ubiquitin carboxyl-terminal hydrolase 46
protein from Pongo abelii 5.1e-24
Usp46
ubiquitin specific peptidase 46
protein from Mus musculus 5.1e-24
Usp46
ubiquitin specific peptidase 46
gene from Rattus norvegicus 5.1e-24
usp12a
ubiquitin specific peptidase 12a
gene_product from Danio rerio 8.4e-24
USP46
Ubiquitin carboxyl-terminal hydrolase
protein from Gallus gallus 1.1e-23
USP12
Ubiquitin carboxyl-terminal hydrolase 12
protein from Bos taurus 1.1e-23
USP12
Ubiquitin carboxyl-terminal hydrolase
protein from Gallus gallus 1.4e-23
USP12
Ubiquitin carboxyl-terminal hydrolase 12
protein from Homo sapiens 1.4e-23
Usp36
Ubiquitin carboxyl-terminal hydrolase 36
protein from Drosophila pseudoobscura pseudoobscura 1.8e-23
usp12-a
Ubiquitin carboxyl-terminal hydrolase 12-A
protein from Xenopus laevis 1.8e-23
usp12-b
Ubiquitin carboxyl-terminal hydrolase 12-B
protein from Xenopus laevis 1.8e-23
USP12
Ubiquitin carboxyl-terminal hydrolase
protein from Canis lupus familiaris 2.3e-23
USP12
Ubiquitin carboxyl-terminal hydrolase
protein from Sus scrofa 2.3e-23
Usp36
Ubiquitin carboxyl-terminal hydrolase 36
protein from Drosophila ananassae 2.6e-23
Usp12
ubiquitin specific peptidase 12
protein from Mus musculus 2.9e-23
Usp12
ubiquitin specific peptidase 12
gene from Rattus norvegicus 2.9e-23
usp12
Ubiquitin carboxyl-terminal hydrolase 12
protein from Salmo salar 4.8e-23
Usp36
Ubiquitin carboxyl-terminal hydrolase 36
protein from Drosophila grimshawi 7.9e-23
USP46
Ubiquitin carboxyl-terminal hydrolase
protein from Canis lupus familiaris 1.0e-22
Usp36
Ubiquitin carboxyl-terminal hydrolase 36
protein from Drosophila virilis 1.3e-22
Usp36
Ubiquitin carboxyl-terminal hydrolase 36
protein from Drosophila mojavensis 3.3e-22
USP46
Ubiquitin carboxyl-terminal hydrolase 46
protein from Homo sapiens 3.5e-22
usp22
ubiquitin specific peptidase 22
gene_product from Danio rerio 1.6e-21
USP22
Ubiquitin carboxyl-terminal hydrolase
protein from Canis lupus familiaris 3.2e-21
usp-46 gene from Caenorhabditis elegans 3.4e-21
USP22
Ubiquitin carboxyl-terminal hydrolase
protein from Gallus gallus 3.6e-21
USP22
Ubiquitin carboxyl-terminal hydrolase 22
protein from Bos taurus 5.0e-21
USP22
Ubiquitin carboxyl-terminal hydrolase 22
protein from Homo sapiens 5.5e-21
Usp22
ubiquitin specific peptidase 22
protein from Mus musculus 5.5e-21
Usp22
ubiquitin specific peptidase 22
gene from Rattus norvegicus 5.5e-21
Usp36
Ubiquitin carboxyl-terminal hydrolase 36
protein from Drosophila willistoni 3.5e-20
Usp36
Ubiquitin carboxyl-terminal hydrolase 36
protein from Drosophila sechellia 4.2e-20
Usp51
ubiquitin specific peptidase 51
gene from Rattus norvegicus 5.0e-20
USP36
Ubiquitin carboxyl-terminal hydrolase 36
protein from Homo sapiens 1.7e-19
USP36
Ubiquitin carboxyl-terminal hydrolase 36
protein from Homo sapiens 1.7e-19

The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  003615
        (807 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2121959 - symbol:UBP16 "ubiquitin-specific pro...   921  7.2e-133  3
TAIR|locus:2168282 - symbol:UBP17 "AT5G65450" species:370...   890  5.5e-113  2
TAIR|locus:2124809 - symbol:UBP18 "AT4G31670" species:370...   726  4.0e-83   2
TAIR|locus:2046678 - symbol:UBP19 "AT2G24640" species:370...   713  4.0e-83   2
DICTYBASE|DDB_G0274827 - symbol:DDB_G0274827 "putative ub...   467  8.0e-42   1
POMBASE|SPCC1682.12c - symbol:ubp16 "ubiquitin C-terminal...   430  5.4e-40   1
MGI|MGI:1924050 - symbol:Usp42 "ubiquitin specific peptid...   453  9.0e-40   1
RGD|1305231 - symbol:Usp42 "ubiquitin specific peptidase ...   453  9.0e-40   1
UNIPROTKB|Q9H9J4 - symbol:USP42 "Ubiquitin carboxyl-termi...   452  1.2e-39   1
UNIPROTKB|E2RHU7 - symbol:USP42 "Ubiquitin carboxyl-termi...   452  1.2e-39   1
UNIPROTKB|E1B9W9 - symbol:USP42 "Ubiquitin carboxyl-termi...   452  1.2e-39   1
ZFIN|ZDB-GENE-030131-5739 - symbol:usp42 "ubiquitin speci...   443  8.1e-39   1
ZFIN|ZDB-GENE-030131-5450 - symbol:usp36 "ubiquitin speci...   437  4.5e-38   1
UNIPROTKB|Q9P275 - symbol:USP36 "Ubiquitin carboxyl-termi...   435  7.8e-38   1
MGI|MGI:1919594 - symbol:Usp36 "ubiquitin specific peptid...   433  1.3e-37   1
UNIPROTKB|E1BGW4 - symbol:USP36 "Ubiquitin carboxyl-termi...   433  1.3e-37   1
UNIPROTKB|E2RKV1 - symbol:USP36 "Ubiquitin carboxyl-termi...   431  2.2e-37   1
UNIPROTKB|F1RZ74 - symbol:USP36 "Ubiquitin carboxyl-termi...   431  2.2e-37   1
UNIPROTKB|E1C4I0 - symbol:USP42 "Ubiquitin carboxyl-termi...   431  2.7e-37   1
TAIR|locus:2090985 - symbol:UBP25 "ubiquitin-specific pro...   393  9.0e-34   1
UNIPROTKB|Q6QN14 - symbol:USP17L6 "Ubiquitin carboxyl-ter...   369  3.0e-33   1
RGD|1309937 - symbol:Usp36 "ubiquitin specific peptidase ...   393  3.3e-33   1
UNIPROTKB|C9JLJ4 - symbol:USP17L13 "Ubiquitin carboxyl-te...   373  2.6e-32   1
UNIPROTKB|C9JPN9 - symbol:USP17L12 "Ubiquitin carboxyl-te...   373  2.6e-32   1
UNIPROTKB|D6R901 - symbol:USP17L21 "Ubiquitin carboxyl-te...   373  2.6e-32   1
UNIPROTKB|I3L0E4 - symbol:USP17L13 "Ubiquitin carboxyl-te...   373  2.6e-32   1
UNIPROTKB|E2R2N1 - symbol:LOC609437 "Ubiquitin carboxyl-t...   373  3.1e-32   1
UNIPROTKB|A8MUK1 - symbol:USP17L5 "Ubiquitin carboxyl-ter...   369  8.7e-32   1
UNIPROTKB|C9J2P7 - symbol:USP17L15 "Ubiquitin carboxyl-te...   369  8.7e-32   1
UNIPROTKB|C9JVI0 - symbol:USP17L11 "Ubiquitin carboxyl-te...   369  8.7e-32   1
UNIPROTKB|D6R9N7 - symbol:USP17L18 "Ubiquitin carboxyl-te...   369  8.7e-32   1
UNIPROTKB|D6RA61 - symbol:USP17L22 "Ubiquitin carboxyl-te...   369  8.7e-32   1
UNIPROTKB|D6RBQ6 - symbol:USP17L17 "Ubiquitin carboxyl-te...   369  8.7e-32   1
UNIPROTKB|D6RCP7 - symbol:USP17L19 "Ubiquitin carboxyl-te...   369  8.7e-32   1
UNIPROTKB|D6RJB6 - symbol:USP17L20 "Ubiquitin carboxyl-te...   369  8.7e-32   1
UNIPROTKB|Q0WX57 - symbol:USP17L24 "Ubiquitin carboxyl-te...   369  8.7e-32   1
TAIR|locus:2174403 - symbol:UBP23 "ubiquitin-specific pro...   377  1.4e-31   1
UNIPROTKB|J9PAN5 - symbol:LOC609268 "Ubiquitin carboxyl-t...   360  1.3e-30   1
UNIPROTKB|C9JJH3 - symbol:USP17L10 "Ubiquitin carboxyl-te...   358  2.1e-30   1
UNIPROTKB|J9NSR8 - symbol:LOC609310 "Ubiquitin carboxyl-t...   358  2.2e-30   1
MGI|MGI:107699 - symbol:Usp17la "ubiquitin specific pepti...   356  3.4e-30   1
UNIPROTKB|F1PQJ0 - symbol:LOC100686685 "Uncharacterized p...   356  3.7e-30   1
UNIPROTKB|Q6R6M4 - symbol:USP17L2 "Ubiquitin carboxyl-ter...   355  4.9e-30   1
UNIPROTKB|P0C7I0 - symbol:USP17L8 "Inactive ubiquitin car...   350  2.0e-29   1
UNIPROTKB|J9JHA0 - symbol:J9JHA0 "Uncharacterized protein...   329  6.9e-29   1
UNIPROTKB|E2R279 - symbol:E2R279 "Ubiquitin carboxyl-term...   339  3.7e-28   1
UNIPROTKB|A6NCW0 - symbol:USP17L3 "Ubiquitin carboxyl-ter...   339  3.9e-28   1
UNIPROTKB|A6NCW7 - symbol:USP17L4 "Inactive ubiquitin car...   336  8.8e-28   1
UNIPROTKB|Q7RTZ2 - symbol:USP17L1P "Putative ubiquitin ca...   332  2.6e-27   1
UNIPROTKB|E7EWZ4 - symbol:USP42 "Ubiquitin carboxyl-termi...   325  6.3e-27   1
RGD|1562061 - symbol:Usp17l5 "ubiquitin specific peptidas...   315  1.7e-25   1
RGD|1565607 - symbol:RGD1565607 "similar to mouse deubiqu...   315  1.7e-25   1
UNIPROTKB|F1NVC5 - symbol:USP12P1 "Ubiquitin carboxyl-ter...   297  2.0e-25   1
RGD|1588758 - symbol:LOC689730 "similar to ubiquitin spec...   309  1.1e-24   1
UNIPROTKB|C9JPC9 - symbol:USP42 "Ubiquitin carboxyl-termi...   316  1.1e-24   1
UNIPROTKB|B4PIW8 - symbol:Usp36 "Ubiquitin carboxyl-termi...   314  1.9e-24   1
UNIPROTKB|B4QIS3 - symbol:Usp36 "Ubiquitin carboxyl-termi...   313  2.1e-24   1
FB|FBgn0260936 - symbol:scny "scrawny" species:7227 "Dros...   313  2.5e-24   1
UNIPROTKB|B3NC86 - symbol:Usp36 "Ubiquitin carboxyl-termi...   313  2.5e-24   1
UNIPROTKB|P0C7H9 - symbol:USP17L7 "Inactive ubiquitin car...   304  4.1e-24   1
UNIPROTKB|F1MZM8 - symbol:USP46 "Ubiquitin carboxyl-termi...   284  5.1e-24   1
UNIPROTKB|P62068 - symbol:USP46 "Ubiquitin carboxyl-termi...   284  5.1e-24   1
UNIPROTKB|I3LLE9 - symbol:USP46 "Uncharacterized protein"...   284  5.1e-24   1
UNIPROTKB|Q5RBQ4 - symbol:USP46 "Ubiquitin carboxyl-termi...   284  5.1e-24   1
MGI|MGI:1916977 - symbol:Usp46 "ubiquitin specific peptid...   284  5.1e-24   1
RGD|1564808 - symbol:Usp46 "ubiquitin specific peptidase ...   284  5.1e-24   1
UNIPROTKB|F1M625 - symbol:Usp46 "Ubiquitin carboxyl-termi...   284  5.1e-24   1
ZFIN|ZDB-GENE-060228-3 - symbol:usp12a "ubiquitin specifi...   282  8.4e-24   1
UNIPROTKB|E1C8J6 - symbol:USP46 "Ubiquitin carboxyl-termi...   281  1.1e-23   1
UNIPROTKB|A5D9H7 - symbol:USP12 "Ubiquitin carboxyl-termi...   281  1.1e-23   1
UNIPROTKB|F1P2L3 - symbol:USP12 "Ubiquitin carboxyl-termi...   280  1.4e-23   1
UNIPROTKB|O75317 - symbol:USP12 "Ubiquitin carboxyl-termi...   280  1.4e-23   1
UNIPROTKB|Q2LZB1 - symbol:Usp36 "Ubiquitin carboxyl-termi...   305  1.8e-23   1
UNIPROTKB|Q52KZ6 - symbol:usp12-a "Ubiquitin carboxyl-ter...   279  1.8e-23   1
UNIPROTKB|Q5M981 - symbol:usp12-b "Ubiquitin carboxyl-ter...   279  1.8e-23   1
UNIPROTKB|E2RG22 - symbol:USP12 "Ubiquitin carboxyl-termi...   278  2.3e-23   1
UNIPROTKB|F1RTK0 - symbol:USP12 "Ubiquitin carboxyl-termi...   278  2.3e-23   1
UNIPROTKB|B3M3M6 - symbol:Usp36 "Ubiquitin carboxyl-termi...   310  2.6e-23   2
MGI|MGI:1270128 - symbol:Usp12 "ubiquitin specific peptid...   277  2.9e-23   1
RGD|1308045 - symbol:Usp12 "ubiquitin specific peptidase ...   277  2.9e-23   1
UNIPROTKB|C0HB46 - symbol:usp12 "Ubiquitin carboxyl-termi...   275  4.8e-23   1
UNIPROTKB|B4IXE0 - symbol:Usp36 "Ubiquitin carboxyl-termi...   300  7.9e-23   1
UNIPROTKB|E2R587 - symbol:USP46 "Ubiquitin carboxyl-termi...   272  1.0e-22   1
UNIPROTKB|B4LG38 - symbol:Usp36 "Ubiquitin carboxyl-termi...   298  1.3e-22   1
UNIPROTKB|F1LSW9 - symbol:RGD1561481 "Ubiquitin carboxyl-...   270  1.7e-22   1
UNIPROTKB|B4KXJ5 - symbol:Usp36 "Ubiquitin carboxyl-termi...   294  3.3e-22   1
UNIPROTKB|H7BZK6 - symbol:USP46 "Ubiquitin carboxyl-termi...   267  3.5e-22   1
ZFIN|ZDB-GENE-060512-211 - symbol:usp22 "ubiquitin specif...   226  1.6e-21   2
UNIPROTKB|F1PLI6 - symbol:USP22 "Ubiquitin carboxyl-termi...   221  3.2e-21   2
WB|WBGene00011216 - symbol:usp-46 species:6239 "Caenorhab...   183  3.4e-21   2
UNIPROTKB|F1NG36 - symbol:USP22 "Ubiquitin carboxyl-termi...   221  3.6e-21   2
UNIPROTKB|P0C8Z3 - symbol:USP22 "Ubiquitin carboxyl-termi...   221  5.0e-21   2
UNIPROTKB|Q9UPT9 - symbol:USP22 "Ubiquitin carboxyl-termi...   221  5.5e-21   2
MGI|MGI:2144157 - symbol:Usp22 "ubiquitin specific peptid...   221  5.5e-21   2
RGD|1310354 - symbol:Usp22 "ubiquitin specific peptidase ...   221  5.5e-21   2
UNIPROTKB|B4MLR8 - symbol:Usp36 "Ubiquitin carboxyl-termi...   276  3.5e-20   1
UNIPROTKB|B4HUI5 - symbol:Usp36 "Ubiquitin carboxyl-termi...   274  4.2e-20   1
RGD|1562211 - symbol:Usp51 "ubiquitin specific peptidase ...   275  5.0e-20   2
UNIPROTKB|K7ELR5 - symbol:USP36 "Ubiquitin carboxyl-termi...   242  1.7e-19   1
UNIPROTKB|Q8IXW9 - symbol:USP36 "Ubiquitin carboxyl-termi...   242  1.7e-19   1

WARNING:  Descriptions of 393 database sequences were not reported due to the
          limiting value of parameter V = 100.


>TAIR|locus:2121959 [details] [associations]
            symbol:UBP16 "ubiquitin-specific protease 16"
            species:3702 "Arabidopsis thaliana" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISS] [GO:0005576
            "extracellular region" evidence=ISM] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008283 "cell
            proliferation" evidence=IGI] [GO:0009908 "flower development"
            evidence=IGI] [GO:0048364 "root development" evidence=IGI]
            [GO:0048366 "leaf development" evidence=IGI] [GO:0048367 "shoot
            system development" evidence=IGI] [GO:0000956 "nuclear-transcribed
            mRNA catabolic process" evidence=RCA] [GO:0006486 "protein
            glycosylation" evidence=RCA] [GO:0006487 "protein N-linked
            glycosylation" evidence=RCA] InterPro:IPR001394 InterPro:IPR002893
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF01753 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS01360 PROSITE:PS50235 PROSITE:PS50865
            GO:GO:0016021 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
            GO:GO:0008283 GO:GO:0008270 GO:GO:0008234 GO:GO:0048364
            GO:GO:0006511 EMBL:AL035356 GO:GO:0009908 EMBL:AL161561
            GO:GO:0048366 GO:GO:0004221 eggNOG:COG5533 EMBL:AF302666
            IPI:IPI00518628 PIR:T05578 RefSeq:NP_567705.1 UniGene:At.2551
            HSSP:P43593 ProteinModelPortal:Q9SB51 SMR:Q9SB51 MEROPS:C19.A07
            PaxDb:Q9SB51 PRIDE:Q9SB51 EnsemblPlants:AT4G24560.1 GeneID:828558
            KEGG:ath:AT4G24560 TAIR:At4g24560 HOGENOM:HOG000242869
            InParanoid:Q9SB51 KO:K11855 OMA:RCKSYEK PhylomeDB:Q9SB51
            ProtClustDB:CLSN2917604 Genevestigator:Q9SB51 Uniprot:Q9SB51
        Length = 1008

 Score = 921 (329.3 bits), Expect = 7.2e-133, Sum P(3) = 7.2e-133
 Identities = 187/299 (62%), Positives = 222/299 (74%)

Query:   502 RSERFDNVQRSSAMSAQIENSPSNVGNGLKTSLWKAVDQFRGSKSSKQCLSVGCETAGRY 561
             +S R  + Q+ +    Q  NS     +GLK S+ K VDQ+   KS         E AGR+
Sbjct:   467 KSVRVLDHQKQNGAVVQHINSLHG-RSGLKASVLKVVDQWTRPKSEN-------EMAGRH 518

Query:   562 SDKGLFSYELFVKLYNWNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSK 621
               KGLF YE+F KLY + K+E QPCGLIN GNSC+ANVV QCL FTPPLT YFLQ  HS+
Sbjct:   519 GHKGLFPYEVFAKLYTY-KIEFQPCGLINVGNSCFANVVFQCLMFTPPLTTYFLQQFHSR 577

Query:   622 ECAKKDWCFTCELENLILRAKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAID 681
              C KK+ CFTC  E L+++AK+ KSPLSP G+LS+LQ+IG  LGNG+EEDAHEFLR+ +D
Sbjct:   578 ACTKKEQCFTCGFEKLVVKAKEEKSPLSPNGLLSQLQNIGIFLGNGKEEDAHEFLRFVVD 637

Query:   682 TMQSVCIE--EAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVE 739
             TMQSVCI+  E  +  S  LED TTLIGLTFGGYLRSKIKC KC  KSE +E+MMDLTVE
Sbjct:   638 TMQSVCIKASEYDMTKSSKLED-TTLIGLTFGGYLRSKIKCMKCQVKSELREKMMDLTVE 696

Query:   740 IEGDIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
             I+GDI  L++ALRR+T TEILDGENKY+C  CKSYE+AKKKL I E PN+LTIALKRFQ
Sbjct:   697 IDGDISTLDDALRRFTRTEILDGENKYRCGSCKSYERAKKKLKITEPPNVLTIALKRFQ 755

 Score = 292 (107.8 bits), Expect = 7.2e-133, Sum P(3) = 7.2e-133
 Identities = 57/118 (48%), Positives = 67/118 (56%)

Query:     6 DLGXXXXXXXXXXXXPAIALIIRRKWRRAVARKEEIKRLLILXXXXXXXXXXXXXYGYST 65
             DLG            P I L +R KWR A  R+EEI+RLLI                +S+
Sbjct:     6 DLGISSLVLVVSLVLPLIGLFVRHKWRVAAQRREEIRRLLIHASEEAARAELEASVEFSS 65

Query:    66 TVYVPQHPQCAVCFSPTTTRCARCKAVRYCSGKCQIVHWRQGHKDECQPPSISHEIND 123
              V V     C VC+   TTRC+RCKAVRYCSGKCQI+HWRQGHKDEC P SI ++  D
Sbjct:    66 -VAVSNVFHCPVCYCLATTRCSRCKAVRYCSGKCQIIHWRQGHKDECHPASIVYDSED 122

 Score = 125 (49.1 bits), Expect = 7.2e-133, Sum P(3) = 7.2e-133
 Identities = 37/109 (33%), Positives = 52/109 (47%)

Query:   229 NESEKLDGPLSADITLDMLDNALNVKKLEERKPLSPKFAKLVDSVDNFTKLNRFCETKPG 288
             +ESE+ +  L A ++++  D   +  +    K LSPKF  LV+SVDN   L +    KP 
Sbjct:   221 SESERSESLLDAHVSVEPEDTCFSTIEDAPSKLLSPKFVHLVESVDNLANLPKLSVHKPE 280

Query:   289 CSGDLQCTPANSL-GLGASHMNVNAERSTVSSSFWGRTL---EPKMDSC 333
                    + + SL  L      V+A+ S  SS FWG  L   E   DSC
Sbjct:   281 DDAGQNQSQSRSLHSLVTDRHPVSADPSLKSSDFWGTALGSAERVSDSC 329

 Score = 41 (19.5 bits), Expect = 3.2e-21, Sum P(2) = 3.2e-21
 Identities = 9/14 (64%), Positives = 10/14 (71%)

Query:   251 LNVKKLEERKPLSP 264
             L VK  EE+ PLSP
Sbjct:   593 LVVKAKEEKSPLSP 606

 Score = 41 (19.5 bits), Expect = 3.2e-21, Sum P(2) = 3.2e-21
 Identities = 28/105 (26%), Positives = 48/105 (45%)

Query:   644 GKSPLS-PIG--ILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLE 700
             G  P++ PIG  +LS  ++   + GNG   D  + L   ID  ++V + E     SG   
Sbjct:   146 GPEPVTIPIGESLLSN-RARSPEDGNGDIADNKDDL---IDKEEAVSVAET----SG--- 194

Query:   701 DETTLIGLTFGGYLRSKIKCTKCHG----KSERQERMMDLTVEIE 741
               ++  G +      S  + ++C      +SER E ++D  V +E
Sbjct:   195 --SSFSGFSSSPRNDSGDEISRCESFSSSESERSESLLDAHVSVE 237

 Score = 37 (18.1 bits), Expect = 1.3e-123, Sum P(3) = 1.3e-123
 Identities = 13/47 (27%), Positives = 20/47 (42%)

Query:   229 NESEKLDGPLSADITLDMLDNALNVKKLEERKPLSPKFAKLVDSVDN 275
             +E+  +  PL       +   A N KK  +    SP  AK V  +D+
Sbjct:   428 SENGSMLAPLKVGEVQLLASKASNTKKCADLMKHSPLGAKSVRVLDH 474


>TAIR|locus:2168282 [details] [associations]
            symbol:UBP17 "AT5G65450" species:3702 "Arabidopsis
            thaliana" [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA;ISS] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA;ISS] [GO:0008270 "zinc ion binding"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR002893
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF01753 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS01360 PROSITE:PS50235 PROSITE:PS50865
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270
            GO:GO:0008234 GO:GO:0006511 EMBL:AB011479 GO:GO:0004221
            eggNOG:COG5533 HSSP:P54578 HOGENOM:HOG000242869 KO:K11855
            EMBL:AF302667 IPI:IPI00540431 IPI:IPI00882576 RefSeq:NP_201348.1
            UniGene:At.16943 ProteinModelPortal:Q9FKP5 SMR:Q9FKP5
            MEROPS:C19.A06 PRIDE:Q9FKP5 EnsemblPlants:AT5G65450.1 GeneID:836670
            KEGG:ath:AT5G65450 TAIR:At5g65450 InParanoid:Q9FKP5 OMA:LEGAYML
            PhylomeDB:Q9FKP5 ProtClustDB:CLSN2686475 Genevestigator:Q9FKP5
            Uniprot:Q9FKP5
        Length = 731

 Score = 890 (318.4 bits), Expect = 5.5e-113, Sum P(2) = 5.5e-113
 Identities = 182/284 (64%), Positives = 214/284 (75%)

Query:   528 NGLKTSLWKAVDQFRGSKSSKQCLSVGCETAGRYSDKGLFSYELFVKLYNWNKVELQPCG 587
             +GLKTS+ K V  FR  +SSK+             D+  FSYELFVKLY  ++VELQP G
Sbjct:   278 SGLKTSVQKVVQHFRPPQSSKK------SQPSSSIDEMSFSYELFVKLY-CDRVELQPFG 330

Query:   588 LINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGKSP 647
             L+N GNSCYAN VLQCLAFT PL +Y ++GLHSK C KK WCF CE E+LIL+A+ G+SP
Sbjct:   331 LVNLGNSCYANAVLQCLAFTRPLISYLIRGLHSKTCRKKSWCFVCEFEHLILKARGGESP 390

Query:   648 LSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLIG 707
             LSPI ILS+LQ IG  LG G+EEDAHEFLR A+DTMQSV ++EA   A+GP  +ETTL+G
Sbjct:   391 LSPIKILSKLQKIGKHLGPGKEEDAHEFLRCAVDTMQSVFLKEAP--AAGPFAEETTLVG 448

Query:   708 LTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGENKYK 767
             LTFGGYL SKIKC  C  KSER E MMDLTVEI+GDIG+LEEAL ++T  E+LDGEN+Y 
Sbjct:   449 LTFGGYLHSKIKCMACLHKSERPELMMDLTVEIDGDIGSLEEALAQFTAYEVLDGENRYF 508

Query:   768 CDRCKSYEKAKKKLTIVEAPNILTIALKRFQV--FSPL--PISF 807
             C RCKSY+KAKKKL I+E PNILT+ LKRFQ   F  L  PI F
Sbjct:   509 CGRCKSYQKAKKKLMILEGPNILTVVLKRFQSDNFGKLSKPIHF 552

 Score = 245 (91.3 bits), Expect = 5.5e-113, Sum P(2) = 5.5e-113
 Identities = 47/102 (46%), Positives = 62/102 (60%)

Query:    23 IALIIRRKWRRAVARKEEIKRLLILXXXXXXXXX----XXXXYGYSTTVYVPQHPQCAVC 78
             + L+IRR+WR A  R+EE+ RL+ L                 YG  +   V    +CAVC
Sbjct:     4 VFLLIRRQWRSASVRREEVIRLIALATEESYLAEEVRPATVDYGGDS---VSDVYRCAVC 60

Query:    79 FSPTTTRCARCKAVRYCSGKCQIVHWRQGHKDECQPPSISHE 120
               PTTTRC++CK+VRYCS KCQI+HWR+GHK+EC+ P    E
Sbjct:    61 LYPTTTRCSQCKSVRYCSSKCQILHWRRGHKEECRSPDYDEE 102


>TAIR|locus:2124809 [details] [associations]
            symbol:UBP18 "AT4G31670" species:3702 "Arabidopsis
            thaliana" [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA;ISS] [GO:0005576 "extracellular region" evidence=ISM]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA;ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR002893 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF01753 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS01360 PROSITE:PS50235 PROSITE:PS50865 GO:GO:0016021
            EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872 GO:GO:0008270
            GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 EMBL:AL161579
            eggNOG:COG5533 EMBL:AL031004 KO:K11855 EMBL:AY142532 EMBL:AK175467
            EMBL:AK176703 IPI:IPI00536587 PIR:T05103 RefSeq:NP_194895.1
            UniGene:At.31726 HSSP:O75398 ProteinModelPortal:Q67XW5 SMR:Q67XW5
            MEROPS:C19.A08 PRIDE:Q67XW5 EnsemblPlants:AT4G31670.1 GeneID:829295
            KEGG:ath:AT4G31670 TAIR:At4g31670 HOGENOM:HOG000097839
            InParanoid:Q67XW5 OMA:ECCSEVE PhylomeDB:Q67XW5
            ProtClustDB:CLSN2685876 Genevestigator:Q67XW5 Uniprot:Q67XW5
        Length = 631

 Score = 726 (260.6 bits), Expect = 4.0e-83, Sum P(2) = 4.0e-83
 Identities = 134/234 (57%), Positives = 169/234 (72%)

Query:   566 LFSYELFVKLYNWNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAK 625
             LF YE FV+ +NW+  EL PCGL+NCGNSC+ANV+LQCL++T PL AY L+  H +EC +
Sbjct:   148 LFPYEEFVEYFNWDNPELAPCGLMNCGNSCFANVILQCLSWTRPLVAYLLEKGHKRECMR 207

Query:   626 KDWCFTCELENLILRAKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQS 685
              DWCF CE +  + RA   + P SP+ I+SRL +IG  LG GR+EDAHEF+RYAID MQS
Sbjct:   208 NDWCFLCEFQTHVERASQSRFPFSPMNIISRLTNIGGTLGYGRQEDAHEFMRYAIDMMQS 267

Query:   686 VCIEE-AGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDI 744
             VC++E  G     P   ETTLI   FGG L+S+++CT C+  S++ E MMDL VE+ GD 
Sbjct:   268 VCLDEFGGEKIVPPRSQETTLIQYIFGGLLQSQVQCTVCNHVSDQYENMMDLIVEMHGDA 327

Query:   745 GNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
             G+LEE L ++T  E L G+N YKCDRC  Y KA K+LTI  APNILTIALKR+Q
Sbjct:   328 GSLEECLDQFTAEEWLHGDNMYKCDRCSDYVKACKRLTIRRAPNILTIALKRYQ 381

 Score = 126 (49.4 bits), Expect = 4.0e-83, Sum P(2) = 4.0e-83
 Identities = 20/44 (45%), Positives = 30/44 (68%)

Query:    75 CAVCFSPTTTRCARCKAVRYCSGKCQIVHWRQGHKDECQPPSIS 118
             C+VC + +T +C+RCK+VRYCS +CQ   W  GH+  C+   I+
Sbjct:    61 CSVCGNFSTKKCSRCKSVRYCSAECQRSDWSSGHQRNCRDYGIT 104


>TAIR|locus:2046678 [details] [associations]
            symbol:UBP19 "AT2G24640" species:3702 "Arabidopsis
            thaliana" [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA;ISS]
            [GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001394
            InterPro:IPR002893 InterPro:IPR018200 Pfam:PF00443 Pfam:PF01753
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS01360 PROSITE:PS50235
            PROSITE:PS50865 GO:GO:0016021 EMBL:CP002685
            GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0008234
            GO:GO:0006511 EMBL:AC006954 GO:GO:0004221 eggNOG:COG5533
            HSSP:P54578 KO:K11855 HOGENOM:HOG000097839 ProtClustDB:CLSN2685876
            EMBL:AF360315 EMBL:AY056366 IPI:IPI00518677 PIR:B84639
            RefSeq:NP_565576.1 UniGene:At.14198 ProteinModelPortal:Q9SJA1
            SMR:Q9SJA1 MEROPS:C19.A09 EnsemblPlants:AT2G24640.1 GeneID:817000
            KEGG:ath:AT2G24640 TAIR:At2g24640 InParanoid:Q9SJA1 OMA:PLEKEHS
            PhylomeDB:Q9SJA1 Genevestigator:Q9SJA1 Uniprot:Q9SJA1
        Length = 672

 Score = 713 (256.0 bits), Expect = 4.0e-83, Sum P(2) = 4.0e-83
 Identities = 135/234 (57%), Positives = 167/234 (71%)

Query:   566 LFSYELFVKLYNWNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAK 625
             LF YE FV+ YNW++  + PCGL NCGNSC+ANVVLQCL++T PL AY L+  H +EC +
Sbjct:   154 LFPYESFVRYYNWDRPIMAPCGLTNCGNSCFANVVLQCLSWTRPLVAYLLERGHKRECRR 213

Query:   626 KDWCFTCELENLILRAKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQS 685
              DWCF CE EN + RA   + P SP+ I+SRL +IG  LG GR+EDAHE +R+AID MQS
Sbjct:   214 NDWCFLCEFENHLDRANYSRFPFSPMNIISRLPNIGGNLGYGRQEDAHELMRFAIDMMQS 273

Query:   686 VCIEE-AGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDI 744
             VC++E  G     P   ETTLI   FGG L+S+++CT C   S++ E MMDLTVEI GD 
Sbjct:   274 VCLDEFGGEKVVPPRAQETTLIQYIFGGLLQSQVQCTACSNVSDQYENMMDLTVEIHGDA 333

Query:   745 GNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
              +LEE L ++T  E L G+N YKCDRC  Y KA K+L+I  APNILTIALKRFQ
Sbjct:   334 VSLEECLDQFTAKEWLQGDNLYKCDRCDDYVKACKRLSIRCAPNILTIALKRFQ 387

 Score = 139 (54.0 bits), Expect = 4.0e-83, Sum P(2) = 4.0e-83
 Identities = 21/40 (52%), Positives = 29/40 (72%)

Query:    74 QCAVCFSPTTTRCARCKAVRYCSGKCQIVHWRQGHKDECQ 113
             +C+VC   TT +C+RCK+VRYCS  CQ   W+ GHK +C+
Sbjct:    63 ECSVCGKATTKKCSRCKSVRYCSAACQTSDWKSGHKLKCK 102

 Score = 39 (18.8 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
 Identities = 15/59 (25%), Positives = 30/59 (50%)

Query:   653 ILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLIGLTFG 711
             + SR+Q   S L   R E++ +  +   DT+ +   ++  V +SG   ++T++  L  G
Sbjct:   476 LYSRVQPRPSNL---RSEESQDEKK--TDTLNTESNQDGSVESSGVGTNDTSVSSLCNG 529

 Score = 38 (18.4 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
 Identities = 17/62 (27%), Positives = 27/62 (43%)

Query:   458 RDSVCSNGLNISGGTSLRFEKSNIVTNDIGSSSNFVGMPSVPSVRSERFDNVQRSSAMSA 517
             +D   ++ LN         E S + TND   SS   G+ S     SE     ++ S++SA
Sbjct:   493 QDEKKTDTLNTESNQDGSVESSGVGTNDTSVSSLCNGIIS----HSED-PEYEKESSLSA 547

Query:   518 QI 519
              +
Sbjct:   548 SV 549


>DICTYBASE|DDB_G0274827 [details] [associations]
            symbol:DDB_G0274827 "putative ubiquitin
            carboxyl-terminal hydrolase (UCH)" species:44689 "Dictyostelium
            discoideum" [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            dictyBase:DDB_G0274827 GO:GO:0008234 EMBL:AAFI02000012
            GO:GO:0006511 GO:GO:0004221 eggNOG:COG5077 KO:K11855
            RefSeq:XP_643982.1 ProteinModelPortal:Q86J16
            EnsemblProtists:DDB0237738 GeneID:8619408 KEGG:ddi:DDB_G0274827
            OMA:SHEFIRF ProtClustDB:CLSZ2846888 Uniprot:Q86J16
        Length = 919

 Score = 467 (169.5 bits), Expect = 8.0e-42, P = 8.0e-42
 Identities = 113/329 (34%), Positives = 172/329 (52%)

Query:   477 EKSNIVTNDIGSSSNFVGMPSVPSVRSERFDNVQRSSAMSAQIENSPSNVGNGLKTSLWK 536
             EK NI    + S+ +    P     R  +F   +     + Q++N    + N L  S  K
Sbjct:   121 EKLNIKKKQVNSAISNEAKPLFH--RMIKFKEAEIQDDSNDQLKNKYKPI-NKLNDSASK 177

Query:   537 AVDQFRGSKS-SKQCLSVGCETAGRYSD------KGLFSYELFVKLYNWNKVELQPCGLI 589
              +     +KS +K+    G E      +      K LFS +   KL  W  V+    GL 
Sbjct:   178 KLADLAKAKSEAKKKEKEGGEEEEDDDNILAKPKKVLFSVDQLSKLMEWKSVQRIGSGLN 237

Query:   590 NCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRA-KDGKSPL 648
             N GN+C+ N VLQCL +T PL  + +   HS++C    +C  C LE  +L++ K G   +
Sbjct:   238 NVGNTCFMNSVLQCLTYTVPLANFMMSREHSRQCQASGFCIFCSLETQVLQSHKCGGKSI 297

Query:   649 SPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLIGL 708
             +P  I S ++ I      GR+ED+HEF+R+ I+++Q V + +    +    +  TT+IG 
Sbjct:   298 TPKEIASNIRKIAPTFRIGRQEDSHEFIRFMIESLQKVSLSKYPKGSINHRDAMTTVIGS 357

Query:   709 TFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGENKYKC 768
              FGGYLRS++KC++C  +S   +  MDL V+I     +L + L  +  +E+LDG NKYKC
Sbjct:   358 IFGGYLRSQVKCSQCQYESNTYDPFMDLCVDIN-QADSLTKGLTNFVKSELLDGSNKYKC 416

Query:   769 DRCKSYEKAKKKLTIVEAPNILTIALKRF 797
              +CK   KA+K+L I  AP ILT  +KRF
Sbjct:   417 SKCKKLVKAQKRLQIHIAPPILTCQIKRF 445


>POMBASE|SPCC1682.12c [details] [associations]
            symbol:ubp16 "ubiquitin C-terminal hydrolase Ubp16"
            species:4896 "Schizosaccharomyces pombe" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IDA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0016579 "protein deubiquitination" evidence=IDA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PomBase:SPCC1682.12c GO:GO:0005730
            EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0006511 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 eggNOG:COG5077 HSSP:P54578
            OrthoDB:EOG4JHGQN KO:K11855 PIR:T41069 RefSeq:NP_587805.1
            ProteinModelPortal:O74442 MEROPS:C19.A66
            EnsemblFungi:SPCC1682.12c.1 GeneID:2538947 KEGG:spo:SPCC1682.12c
            OMA:YSHETEN NextBio:20800122 Uniprot:O74442
        Length = 457

 Score = 430 (156.4 bits), Expect = 5.4e-40, P = 5.4e-40
 Identities = 113/334 (33%), Positives = 168/334 (50%)

Query:   473 SLRFEKSNIVTNDIGSSSNFVGMPSVPSVRSERFDNVQRS--SAMSAQIENSPS-NVGNG 529
             +++    +++ N +      V  PSVP       +N ++S  S  S     SP+ N  +G
Sbjct:    14 AVKHSLDDLLKNPVRFRPAVVSSPSVPEGTYTVLNNPKQSTVSRKSFSAPTSPTRNKRSG 73

Query:   530 LKTSLWKAVDQFRGSKSSKQCLSVGCETAGRYSDKGLFSYELFVKL-YNWNKVELQPCGL 588
               +  +K     RG  ++     V  + A     + LF  E   KL   W+ +     GL
Sbjct:    74 SSSQEYKKSSGTRGDGAND---FVDEDPAFIPPARILFPEE---KLSMEWDNIMPNAPGL 127

Query:   589 INCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGK--- 645
             +N GN+C+ N VLQ +  TPPL  Y L G HS  C + + C  C +E  + RA   K   
Sbjct:   128 VNLGNTCFMNSVLQLMTQTPPLVQYLLSGQHSLSC-RMNACVLCRMEQHVARAYPNKGTK 186

Query:   646 --SPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDET 703
               S   P GI S L+ I S     R+EDAHEF+RY +D  Q  C++    N   P   ET
Sbjct:   187 RASAFKPSGIQSMLKVISSHFRPYRQEDAHEFMRYLVDAWQKSCLQNHK-NLDHPSR-ET 244

Query:   704 TLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGE 763
             +++   FGGYLR +I C+ C   S   + ++DL+V+ +G   +L ++L+ +   E L  +
Sbjct:   245 SVVHRIFGGYLRQQILCSVCKKPSNTYQALLDLSVDAKGS--SLADSLKHFVHAEKLTKQ 302

Query:   764 NKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             NKY+C+ CK    A K++TI  APNILTI  KRF
Sbjct:   303 NKYRCENCKQLVDASKQMTIYRAPNILTIHFKRF 336


>MGI|MGI:1924050 [details] [associations]
            symbol:Usp42 "ubiquitin specific peptidase 42" species:10090
            "Mus musculus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=IDA] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0007283 "spermatogenesis" evidence=TAS] [GO:0008233 "peptidase
            activity" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0016579 "protein deubiquitination"
            evidence=IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0030154 "cell differentiation" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 MGI:MGI:1924050 GO:GO:0030154 EMBL:CH466529
            GO:GO:0008234 GO:GO:0007283 GO:GO:0006511 GO:GO:0016579
            GO:GO:0004221 eggNOG:COG5533 KO:K11855 GeneTree:ENSGT00670000097591
            OMA:ALHSENP CTD:84132 HOGENOM:HOG000236355 HOVERGEN:HBG080724
            OrthoDB:EOG4RV2RB EMBL:BC137852 IPI:IPI00352204 RefSeq:NP_084025.2
            UniGene:Mm.259620 ProteinModelPortal:B2RQC2 SMR:B2RQC2
            PhosphoSite:B2RQC2 PRIDE:B2RQC2 Ensembl:ENSMUST00000053287
            GeneID:76800 KEGG:mmu:76800 UCSC:uc009akp.1 InParanoid:B2RQC2
            NextBio:345843 Bgee:B2RQC2 Genevestigator:B2RQC2 Uniprot:B2RQC2
        Length = 1324

 Score = 453 (164.5 bits), Expect = 9.0e-40, P = 9.0e-40
 Identities = 89/225 (39%), Positives = 129/225 (57%)

Query:   578 WNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENL 637
             W +      GL N GN+C+AN  LQCL +TPPL  Y L   HSK C  + +C  C ++  
Sbjct:   102 WQQSHRVGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQTH 161

Query:   638 ILRAKDGKSP-LSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNAS 696
             I +A       + P+ +++ ++ I      G +EDAHEFL+Y +D MQ  C+   G N  
Sbjct:   162 ITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLN--GSNKL 219

Query:   697 GPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTG 756
                   TTL+   FGGYLRS++KC  C G S+  +  +D+T+EI+    ++ +AL ++  
Sbjct:   220 DRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA-AQSVTKALEQFVK 278

Query:   757 TEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFS 801
              E LDGEN YKC +CK    A K+ TI  + N+LTI+LKRF  F+
Sbjct:   279 PEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTISLKRFANFT 323


>RGD|1305231 [details] [associations]
            symbol:Usp42 "ubiquitin specific peptidase 42" species:10116
            "Rattus norvegicus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISO] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=ISO;ISS]
            [GO:0030154 "cell differentiation" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 RGD:1305231 GO:GO:0030154 GO:GO:0008234
            GO:GO:0007283 GO:GO:0006511 EMBL:CH474012 GO:GO:0016579
            GO:GO:0004221 KO:K11855 GeneTree:ENSGT00670000097591 CTD:84132
            OrthoDB:EOG4RV2RB IPI:IPI00769124 RefSeq:NP_001099379.1
            UniGene:Rn.25011 Ensembl:ENSRNOT00000001404 GeneID:288482
            KEGG:rno:288482 NextBio:628152 Uniprot:D3ZU96
        Length = 1325

 Score = 453 (164.5 bits), Expect = 9.0e-40, P = 9.0e-40
 Identities = 89/225 (39%), Positives = 129/225 (57%)

Query:   578 WNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENL 637
             W +      GL N GN+C+AN  LQCL +TPPL  Y L   HSK C  + +C  C ++  
Sbjct:   102 WQQSHRVGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQTH 161

Query:   638 ILRAKDGKSP-LSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNAS 696
             I +A       + P+ +++ ++ I      G +EDAHEFL+Y +D MQ  C+   G N  
Sbjct:   162 ITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLN--GSNKL 219

Query:   697 GPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTG 756
                   TTL+   FGGYLRS++KC  C G S+  +  +D+T+EI+    ++ +AL ++  
Sbjct:   220 DRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA-AQSVTKALEQFVK 278

Query:   757 TEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFS 801
              E LDGEN YKC +CK    A K+ TI  + N+LTI+LKRF  F+
Sbjct:   279 PEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTISLKRFANFT 323


>UNIPROTKB|Q9H9J4 [details] [associations]
            symbol:USP42 "Ubiquitin carboxyl-terminal hydrolase 42"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0007283 "spermatogenesis"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=ISS]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0030154 GO:GO:0008234
            GO:GO:0007283 GO:GO:0006511 GO:GO:0016579 GO:GO:0004221
            eggNOG:COG5533 KO:K11855 OMA:ALHSENP EMBL:AJ601395 EMBL:AY618868
            EMBL:AC004895 EMBL:BC060846 EMBL:BC132862 EMBL:AK022759
            IPI:IPI00784612 IPI:IPI01009873 RefSeq:NP_115548.1 UniGene:Hs.31856
            ProteinModelPortal:Q9H9J4 SMR:Q9H9J4 IntAct:Q9H9J4 STRING:Q9H9J4
            MEROPS:C19.048 PhosphoSite:Q9H9J4 DMDM:85681903 PaxDb:Q9H9J4
            PRIDE:Q9H9J4 Ensembl:ENST00000306177 GeneID:84132 KEGG:hsa:84132
            UCSC:uc011jwo.1 UCSC:uc011jwp.2 CTD:84132 GeneCards:GC07P006144
            H-InvDB:HIX0006462 HGNC:HGNC:20068 HPA:HPA006752 neXtProt:NX_Q9H9J4
            PharmGKB:PA134902515 HOGENOM:HOG000236355 HOVERGEN:HBG080724
            InParanoid:Q9H9J4 OrthoDB:EOG4RV2RB GenomeRNAi:84132 NextBio:73425
            PMAP-CutDB:Q9H9J4 ArrayExpress:Q9H9J4 Bgee:Q9H9J4 CleanEx:HS_USP42
            Genevestigator:Q9H9J4 GermOnline:ENSG00000106346 Uniprot:Q9H9J4
        Length = 1324

 Score = 452 (164.2 bits), Expect = 1.2e-39, P = 1.2e-39
 Identities = 88/225 (39%), Positives = 129/225 (57%)

Query:   578 WNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENL 637
             W +      GL N GN+C+AN  LQCL +TPPL  Y L   HSK C  + +C  C ++  
Sbjct:   103 WQQTHRVGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAH 162

Query:   638 ILRAKDGKSP-LSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNAS 696
             I +A       + P+ +++ ++ I      G +EDAHEFL+Y +D MQ  C+   G N  
Sbjct:   163 ITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLN--GSNKL 220

Query:   697 GPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTG 756
                   TTL+   FGGYLRS++KC  C G S+  +  +D+T+EI+    ++ +AL ++  
Sbjct:   221 DRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA-AQSVNKALEQFVK 279

Query:   757 TEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFS 801
              E LDGEN YKC +CK    A K+ TI  + N+LT++LKRF  F+
Sbjct:   280 PEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFT 324


>UNIPROTKB|E2RHU7 [details] [associations]
            symbol:USP42 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 KO:K11855
            GeneTree:ENSGT00670000097591 OMA:ALHSENP CTD:84132
            EMBL:AAEX03004287 RefSeq:XP_536882.2 Ensembl:ENSCAFT00000024838
            GeneID:479754 KEGG:cfa:479754 Uniprot:E2RHU7
        Length = 1331

 Score = 452 (164.2 bits), Expect = 1.2e-39, P = 1.2e-39
 Identities = 88/225 (39%), Positives = 129/225 (57%)

Query:   578 WNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENL 637
             W +      GL N GN+C+AN  LQCL +TPPL  Y L   HSK C  + +C  C ++  
Sbjct:   103 WQQTHRVGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAH 162

Query:   638 ILRAKDGKSP-LSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNAS 696
             I +A       + P+ +++ ++ I      G +EDAHEFL+Y +D MQ  C+   G N  
Sbjct:   163 ITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLN--GSNKL 220

Query:   697 GPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTG 756
                   TTL+   FGGYLRS++KC  C G S+  +  +D+T+EI+    ++ +AL ++  
Sbjct:   221 DRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA-AQSVNKALEQFVK 279

Query:   757 TEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFS 801
              E LDGEN YKC +CK    A K+ TI  + N+LT++LKRF  F+
Sbjct:   280 PEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFT 324


>UNIPROTKB|E1B9W9 [details] [associations]
            symbol:USP42 "Ubiquitin carboxyl-terminal hydrolase 42"
            species:9913 "Bos taurus" [GO:0016579 "protein deubiquitination"
            evidence=ISS] [GO:0030154 "cell differentiation" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0030154 GO:GO:0008234
            GO:GO:0007283 GO:GO:0006511 GO:GO:0016579 GO:GO:0004221
            GeneTree:ENSGT00670000097591 EMBL:AAFC03050082 IPI:IPI00711714
            UniGene:Bt.42050 Ensembl:ENSBTAT00000000967 OMA:ALHSENP
            Uniprot:E1B9W9
        Length = 1333

 Score = 452 (164.2 bits), Expect = 1.2e-39, P = 1.2e-39
 Identities = 88/225 (39%), Positives = 129/225 (57%)

Query:   578 WNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENL 637
             W +      GL N GN+C+AN  LQCL +TPPL  Y L   HSK C  + +C  C ++  
Sbjct:   103 WQQTHRVGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAH 162

Query:   638 ILRAKDGKSP-LSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNAS 696
             I +A       + P+ +++ ++ I      G +EDAHEFL+Y +D MQ  C+   G N  
Sbjct:   163 ITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLN--GSNKL 220

Query:   697 GPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTG 756
                   TTL+   FGGYLRS++KC  C G S+  +  +D+T+EI+    ++ +AL ++  
Sbjct:   221 DRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA-AQSVNKALEQFVK 279

Query:   757 TEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFS 801
              E LDGEN YKC +CK    A K+ TI  + N+LT++LKRF  F+
Sbjct:   280 PEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFT 324


>ZFIN|ZDB-GENE-030131-5739 [details] [associations]
            symbol:usp42 "ubiquitin specific peptidase 42"
            species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008233 "peptidase activity"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0006508 "proteolysis" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 ZFIN:ZDB-GENE-030131-5739 GO:GO:0008234
            GO:GO:0006511 GO:GO:0004221 GeneTree:ENSGT00670000097591
            EMBL:CR932017 IPI:IPI00506707 Ensembl:ENSDART00000003375
            ArrayExpress:F1QSB4 Bgee:F1QSB4 Uniprot:F1QSB4
        Length = 1047

 Score = 443 (161.0 bits), Expect = 8.1e-39, P = 8.1e-39
 Identities = 97/241 (40%), Positives = 137/241 (56%)

Query:   564 KGLFSYE-LFVKLYNWNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKE 622
             K LFS E L +K   WN+      GL N GN+C+ N  LQCL +T PL  Y L   HSK 
Sbjct:    94 KVLFSPERLCLK---WNQGHRIGAGLHNLGNTCFLNSTLQCLTYTAPLANYMLTREHSKT 150

Query:   623 CAKKDWCFTCELENLILR--AKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAI 680
             C +  +C  C ++N I++  A  G + + PI +L+ L+ IG     G +EDAHEFLRY +
Sbjct:   151 CHEPGFCMMCTMQNHIIQVFANSG-NVIKPISVLNELKRIGKHFRFGSQEDAHEFLRYTV 209

Query:   681 DTMQSVCIEEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEI 740
             D MQ  C+   G N        TT +   FGGYLRS++KC  C   S+  +  +D+++EI
Sbjct:   210 DAMQKSCLP--G-NKLDRQTQATTFVHQIFGGYLRSRVKCLNCKAVSDTFDPYLDISLEI 266

Query:   741 EGDIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVF 800
             +     L +A  ++   E LDG+N YKC +CK    A K+ T+  + N+LTI+LKRF  F
Sbjct:   267 K-TAQTLSKAFEQFVKPEQLDGDNAYKCSKCKKMVTASKRFTVHRSSNVLTISLKRFTNF 325

Query:   801 S 801
             +
Sbjct:   326 N 326


>ZFIN|ZDB-GENE-030131-5450 [details] [associations]
            symbol:usp36 "ubiquitin specific peptidase 36"
            species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
            "peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 ZFIN:ZDB-GENE-030131-5450 GO:GO:0008234
            GO:GO:0006511 GO:GO:0004221 KO:K11855 CTD:57602
            GeneTree:ENSGT00670000097591 EMBL:CT573423 IPI:IPI00617189
            RefSeq:XP_688241.3 UniGene:Dr.10523 Ensembl:ENSDART00000124540
            Ensembl:ENSDART00000129598 GeneID:327239 KEGG:dre:327239
            NextBio:20809941 Uniprot:E7F4C0
        Length = 1104

 Score = 437 (158.9 bits), Expect = 4.5e-38, P = 4.5e-38
 Identities = 104/312 (33%), Positives = 155/312 (49%)

Query:   497 SVPSVRSERFDNVQRSSAMSAQIENSPS-----NVGNGLKTSLWKAVDQFRGSKSSKQCL 551
             S   V  ++ +    S   S Q+E   +     N  N   TS  +  +  +  +   + L
Sbjct:    31 SAKKVLLQKIEFEPASKGFSYQLETLKTKYVILNPKNDAATSQ-RPTEPAQIKRQISESL 89

Query:   552 SVGCETAGRYSDKGLF-SYELFVKLYNWNKVELQPCGLINCGNSCYANVVLQCLAFTPPL 610
             SVG         K LF   +L +K   W +V     GL N GN+C+ N  +QCL +TPPL
Sbjct:    90 SVGQSDGIPAPQKMLFPGNKLSMK---WERVYRVGAGLHNLGNTCFLNSTVQCLTYTPPL 146

Query:   611 TAYFLQGLHSKECAKKDWCFTCELENLILRA-KDGKSPLSPIGILSRLQSIGSQLGNGRE 669
               Y L   HS+ C +  +C  C ++N I++A  +  + + P+  +  L+ I      G +
Sbjct:   147 ANYLLSKEHSRSCHQSGFCMICVMQNHIIQAFANTANAIKPVSFIRDLKKIARHFRFGSQ 206

Query:   670 EDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSER 729
             EDAHEFLRY ID MQ  C+   G          TTL+   FGGYLRS++KC+ C   S+ 
Sbjct:   207 EDAHEFLRYTIDAMQKACLN--GYPKLDRQTQATTLVHQIFGGYLRSRVKCSICKSVSDT 264

Query:   730 QERMMDLTVEIEGDIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNI 789
              +  +D+ +EI     N+  AL  +   ++L GEN Y C +CK    A K+ T+    N+
Sbjct:   265 YDPYLDIALEIR-QAANIVRALELFVKPDVLSGENAYMCAKCKKKVPATKRFTVHRTSNV 323

Query:   790 LTIALKRFQVFS 801
             LT++LKRF  FS
Sbjct:   324 LTLSLKRFANFS 335


>UNIPROTKB|Q9P275 [details] [associations]
            symbol:USP36 "Ubiquitin carboxyl-terminal hydrolase 36"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IDA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005730
            GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 eggNOG:COG5533 KO:K11855
            EMBL:AB040886 EMBL:BC016487 EMBL:BC027992 EMBL:BC071582
            EMBL:AK001671 EMBL:AL833835 IPI:IPI00001786 IPI:IPI00843790
            RefSeq:NP_079366.3 UniGene:Hs.464243 ProteinModelPortal:Q9P275
            SMR:Q9P275 IntAct:Q9P275 STRING:Q9P275 MEROPS:C19.042
            PhosphoSite:Q9P275 DMDM:124056592 SWISS-2DPAGE:Q9P275 PaxDb:Q9P275
            PeptideAtlas:Q9P275 PRIDE:Q9P275 Ensembl:ENST00000312010
            Ensembl:ENST00000542802 GeneID:57602 KEGG:hsa:57602 UCSC:uc002jvz.1
            UCSC:uc002jwc.1 CTD:57602 GeneCards:GC17M076792 H-InvDB:HIX0014226
            HGNC:HGNC:20062 HPA:HPA012082 MIM:612543 neXtProt:NX_Q9P275
            PharmGKB:PA134949090 HOGENOM:HOG000154759 HOVERGEN:HBG061810
            InParanoid:Q9P275 OMA:VTHPAKA OrthoDB:EOG4V9TQ1 GenomeRNAi:57602
            NextBio:64221 PMAP-CutDB:Q9P275 ArrayExpress:Q9P275 Bgee:Q9P275
            CleanEx:HS_USP36 Genevestigator:Q9P275 GermOnline:ENSG00000055483
            Uniprot:Q9P275
        Length = 1121

 Score = 435 (158.2 bits), Expect = 7.8e-38, P = 7.8e-38
 Identities = 85/225 (37%), Positives = 124/225 (55%)

Query:   578 WNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENL 637
             W +V     GL N GN+C+ N  +QCL +TPPL  Y L   H++ C +  +C  C ++N 
Sbjct:   114 WERVFRVGAGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNH 173

Query:   638 ILRA-KDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNAS 696
             I++A  +  + + P+  +  L+ I      G +EDAHEFLRY ID MQ  C+   G    
Sbjct:   174 IVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLN--GCAKL 231

Query:   697 GPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTG 756
                   TTL+   FGGYLRS++KC+ C   S+  +  +D+ +EI     N+  AL  +  
Sbjct:   232 DRQTQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIR-QAANIVRALELFVK 290

Query:   757 TEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFS 801
              ++L GEN Y C +CK    A K+ TI    N+LT++LKRF  FS
Sbjct:   291 ADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFS 335


>MGI|MGI:1919594 [details] [associations]
            symbol:Usp36 "ubiquitin specific peptidase 36" species:10090
            "Mus musculus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0008233 "peptidase
            activity" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 MGI:MGI:1919594
            GO:GO:0005730 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            EMBL:AL591404 eggNOG:COG5533 KO:K11855 CTD:57602
            HOGENOM:HOG000154759 OMA:VTHPAKA OrthoDB:EOG4V9TQ1 EMBL:AK129363
            IPI:IPI00929784 RefSeq:NP_001028700.1 UniGene:Mm.232293
            ProteinModelPortal:B1AQJ2 SMR:B1AQJ2 PRIDE:B1AQJ2
            Ensembl:ENSMUST00000092382 Ensembl:ENSMUST00000106296 GeneID:72344
            KEGG:mmu:72344 UCSC:uc007mot.2 GeneTree:ENSGT00670000097591
            InParanoid:B1AQJ2 ChiTaRS:USP36 NextBio:336077 Bgee:B1AQJ2
            Genevestigator:B1AQJ2 Uniprot:B1AQJ2
        Length = 1098

 Score = 433 (157.5 bits), Expect = 1.3e-37, P = 1.3e-37
 Identities = 101/310 (32%), Positives = 154/310 (49%)

Query:   497 SVPSVRSERFDNVQRSSAMSAQIENSPSNV----GNGLKTSLWKAVDQFRGSKSSKQCLS 552
             S   V  +R +    S + S Q+E+  S            S  ++ D+ +  K   + +S
Sbjct:    31 SAKKVLLQRIEFEPASKSFSYQLESLKSKYVLLSARAEGASRHRSGDELQARKPGTERVS 90

Query:   553 VGCETAGRYSDKGLFSYELFVKLYNWNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTA 612
                        K LF  E  + L  W +V     GL N GN+C+ N  +QCL +TPPL  
Sbjct:    91 GSGGDGVPAPQKVLFPVER-LSL-RWERVFRVGAGLHNLGNTCFLNSTIQCLTYTPPLAN 148

Query:   613 YFLQGLHSKECAKKDWCFTCELENLILRA-KDGKSPLSPIGILSRLQSIGSQLGNGREED 671
             Y L   H++ C +  +C  C ++N +++A  +  + + P+  +  L+ I      G +ED
Sbjct:   149 YLLSKEHARSCHQGGFCMLCLMQNHMVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQED 208

Query:   672 AHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQE 731
             AHEFLRY ID MQ  C+   G          TTL+   FGGYLRS++KC+ C   S+  +
Sbjct:   209 AHEFLRYTIDAMQKACLN--GYAKLDRQTQATTLVHQIFGGYLRSRVKCSVCKSVSDTYD 266

Query:   732 RMMDLTVEIEGDIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILT 791
               +D+ +EI     N+  AL  +  +++L GEN Y C +CK    A K+ TI    N+LT
Sbjct:   267 PYLDIALEIR-QAANIVRALELFVKSDVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLT 325

Query:   792 IALKRFQVFS 801
             ++LKRF  FS
Sbjct:   326 LSLKRFANFS 335


>UNIPROTKB|E1BGW4 [details] [associations]
            symbol:USP36 "Ubiquitin carboxyl-terminal hydrolase"
            species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005730
            GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 KO:K11855 CTD:57602
            OMA:VTHPAKA GeneTree:ENSGT00670000097591 EMBL:DAAA02049470
            EMBL:DAAA02049471 IPI:IPI01000591 RefSeq:XP_002696201.1
            UniGene:Bt.42165 Ensembl:ENSBTAT00000028663 GeneID:504581
            KEGG:bta:504581 NextBio:20866734 Uniprot:E1BGW4
        Length = 1101

 Score = 433 (157.5 bits), Expect = 1.3e-37, P = 1.3e-37
 Identities = 85/225 (37%), Positives = 125/225 (55%)

Query:   578 WNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENL 637
             W +V     GL N GN+C+ N  +QCL +TPPL  Y L   H++ C +  +C  C ++N 
Sbjct:   114 WGRVYRVGAGLHNLGNTCFLNSTVQCLTYTPPLANYLLSKEHTRGCHQGSFCMLCVMQNH 173

Query:   638 ILRA-KDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNAS 696
             I++A  +  + + P+  +  L+ I      G +EDAHEFLRY ID MQ  C+  +G    
Sbjct:   174 IIQAFANSGNAIKPVSFIRDLRKIARHFRFGNQEDAHEFLRYTIDAMQKACL--SGCAKL 231

Query:   697 GPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTG 756
                   TTL+   FGGYLRS++KC+ C   S+  +  +D+ +EI     N+  AL  +  
Sbjct:   232 DRQTQATTLVHQIFGGYLRSRVKCSMCKSVSDTYDPYLDVALEIR-QAANIVRALELFVK 290

Query:   757 TEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFS 801
              ++L GEN Y C +CK    A K+ TI    N+LT++LKRF  FS
Sbjct:   291 PDVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFS 335


>UNIPROTKB|E2RKV1 [details] [associations]
            symbol:USP36 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0005730 "nucleolus"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            GO:GO:0005730 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 OMA:VTHPAKA
            GeneTree:ENSGT00670000097591 EMBL:AAEX03006230 EMBL:AAEX03006231
            ProteinModelPortal:E2RKV1 Ensembl:ENSCAFT00000008904 Uniprot:E2RKV1
        Length = 1117

 Score = 431 (156.8 bits), Expect = 2.2e-37, P = 2.2e-37
 Identities = 103/318 (32%), Positives = 159/318 (50%)

Query:   486 IGSSSNFVGMPSVPSVRSERFDNVQRSSAMSAQIENSPSNVGNGLKTSLWKAVDQFRGSK 545
             + SS+  V +  +    + +  + Q  S  S  +  +P   G G   S  +   + +GS+
Sbjct:    28 LASSAKKVLLQKIEFEPASKSFSYQLESLKSKYVLLNPKTEGAGRHRSGDEPQARRQGSE 87

Query:   546 SSKQCLSVGCETAGRYSDKGLFSYE-LFVKLYNWNKVELQPCGLINCGNSCYANVVLQCL 604
              + +    G         K LF  E L +K   W +V     GL N GN+C+ N  +QCL
Sbjct:    88 HAYESGGDGVPAP----QKVLFPTERLSLK---WERVYRVGAGLHNLGNTCFLNSTIQCL 140

Query:   605 AFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRA-KDGKSPLSPIGILSRLQSIGSQ 663
              +TPPL  Y L   H++ C +  +C  C ++N +++A  +  + + P+  +  L+ I   
Sbjct:   141 TYTPPLANYLLSKEHTRNCHQGSFCMLCVMQNHMVQAFANSGNAIKPVSFIRDLKKIARH 200

Query:   664 LGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKC 723
                G +EDAHEFLRY ID MQ  C+   G          TTL+   FGGYLRS++KC+ C
Sbjct:   201 FRFGNQEDAHEFLRYTIDAMQKACLN--GCAKLDRQTQATTLVHQIFGGYLRSRVKCSVC 258

Query:   724 HGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTI 783
                S+  +  +D+ +EI     N+  AL  +   ++L GEN Y C +CK    A K+ TI
Sbjct:   259 KSVSDTYDPYLDVALEIR-QAANIVRALELFVKPDVLSGENAYMCAKCKKKVPASKRFTI 317

Query:   784 VEAPNILTIALKRFQVFS 801
                 N+LT++LKRF  FS
Sbjct:   318 HRTSNVLTLSLKRFANFS 335


>UNIPROTKB|F1RZ74 [details] [associations]
            symbol:USP36 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0005730 "nucleolus" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005730
            GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 OMA:VTHPAKA
            GeneTree:ENSGT00670000097591 EMBL:CU942393
            Ensembl:ENSSSCT00000018689 Uniprot:F1RZ74
        Length = 1121

 Score = 431 (156.8 bits), Expect = 2.2e-37, P = 2.2e-37
 Identities = 85/225 (37%), Positives = 125/225 (55%)

Query:   578 WNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENL 637
             W +V     GL N GN+C+ N  +QCL +TPPL  Y L   H++ C +  +C  C ++N 
Sbjct:   120 WGRVYRVGAGLHNLGNTCFLNSTVQCLTYTPPLANYLLSREHTRGCHQGSFCMLCVMQNH 179

Query:   638 ILRA-KDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNAS 696
             I++A  +  + + P+  +  L+ I      G +EDAHEFLRY ID MQ  C+  +G    
Sbjct:   180 IVQAFANSGNAIKPVSFIRDLRKIARHFRFGNQEDAHEFLRYTIDAMQKACL--SGCAKL 237

Query:   697 GPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTG 756
                   TTL+   FGGYLRS++KC+ C   S+  +  +D+ +EI     N+  AL  +  
Sbjct:   238 DRQTQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIR-QAANIVRALELFVK 296

Query:   757 TEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFS 801
              ++L GEN Y C +CK    A K+ TI    N+LT++LKRF  FS
Sbjct:   297 PDVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFS 341


>UNIPROTKB|E1C4I0 [details] [associations]
            symbol:USP42 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00670000097591 OMA:ALHSENP EMBL:AADN02023911
            IPI:IPI00603557 Ensembl:ENSGALT00000005338 Uniprot:E1C4I0
        Length = 1234

 Score = 431 (156.8 bits), Expect = 2.7e-37, P = 2.7e-37
 Identities = 85/226 (37%), Positives = 126/226 (55%)

Query:   577 NWNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELEN 636
             +W + +    GL N GN+C+ N  LQCL +TPPL  Y L   H++ C  + +C  C +E 
Sbjct:    97 DWQQTQNVGVGLFNLGNTCFINSALQCLTYTPPLANYMLSLEHTQSCNYQGFCMMCTMET 156

Query:   637 LILRAKD-GKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNA 695
              I R        + P  ++  L+ IG     G +EDAHEFLR+ +D MQ  C+   G   
Sbjct:   157 HINRVLCCAHDAIKPAFVVHELKRIGKHFRFGAQEDAHEFLRFTVDAMQQACLH--GCTI 214

Query:   696 SGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYT 755
                    TT+I   FGG+LRS++KC  C   S+  E  +D+ ++I+  + ++ +AL ++ 
Sbjct:   215 LDRSSQATTIIHQIFGGFLRSRVKCLNCKAVSDTYEAFLDIPLDIK-TVSSVTKALEQFV 273

Query:   756 GTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFS 801
               E LDGEN YKC +CK    A K+ TI  + N+LTI+LKRF  F+
Sbjct:   274 KPEQLDGENCYKCSKCKKMVPASKRFTIHRSSNVLTISLKRFANFT 319


>TAIR|locus:2090985 [details] [associations]
            symbol:UBP25 "ubiquitin-specific protease 25"
            species:3702 "Arabidopsis thaliana" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 EMBL:CP002686 GenomeReviews:BA000014_GR
            GO:GO:0008234 GO:GO:0006511 EMBL:AB022220 GO:GO:0004221
            eggNOG:COG5077 HSSP:P54578 KO:K11855 EMBL:AF302673 EMBL:AY064992
            EMBL:BT021128 IPI:IPI00539796 RefSeq:NP_566486.1 UniGene:At.6074
            ProteinModelPortal:Q9FPS2 SMR:Q9FPS2 IntAct:Q9FPS2 MEROPS:C19.A13
            PRIDE:Q9FPS2 EnsemblPlants:AT3G14400.1 GeneID:820662
            KEGG:ath:AT3G14400 TAIR:At3g14400 HOGENOM:HOG000084095
            InParanoid:Q9FPS2 OMA:SEKAYIL PhylomeDB:Q9FPS2
            ProtClustDB:CLSN2688374 Genevestigator:Q9FPS2 Uniprot:Q9FPS2
        Length = 661

 Score = 393 (143.4 bits), Expect = 9.0e-34, P = 9.0e-34
 Identities = 88/223 (39%), Positives = 132/223 (59%)

Query:   585 PCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKEC-------AKKDWCFTCELENL 637
             P GL N GN+CY N VLQCL FTPPL  + L   HS  C        K+D C  C +E  
Sbjct:    23 PLGLRNLGNTCYLNSVLQCLTFTPPLANFCLTHKHSSHCDTYVDGERKRD-CPFCIVEKR 81

Query:   638 ILRAKD-GKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQ--SVCIEEAGVN 694
             I R+     +  +P  I S L+        GR+EDAHEFLRY ID     S+ +++   N
Sbjct:    82 IARSLSVDLTTDAPNKISSCLKIFAEHFKLGRQEDAHEFLRYVIDACHNTSLRLKKLRYN 141

Query:   695 ASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRY 754
              + P    + +  + FGG L+S++KC  C  +S + + +MD+++EI     +++E+L+++
Sbjct:   142 GNEPFNGNSVVKEI-FGGALQSQVKCLSCGAESNKADEIMDISLEILQS-SSVKESLQKF 199

Query:   755 TGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
               +EILDG NKY+C+ C+    A+K+++I++APNIL I LKRF
Sbjct:   200 FQSEILDGNNKYRCESCEKLVTARKQMSILQAPNILVIQLKRF 242


>UNIPROTKB|Q6QN14 [details] [associations]
            symbol:USP17L6 "Ubiquitin carboxyl-terminal hydrolase
            17-like protein 6" species:9606 "Homo sapiens" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005634
            GO:GO:0005737 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            eggNOG:COG5533 EMBL:AC116655 HSSP:P54578 HOGENOM:HOG000144638
            HOVERGEN:HBG007129 OrthoDB:EOG42V8G0 EMBL:AY533200 IPI:IPI00740629
            UniGene:Hs.722658 ProteinModelPortal:Q6QN14 SMR:Q6QN14
            STRING:Q6QN14 DMDM:187663985 UCSC:uc011bws.2 H-InvDB:HIX0031631
            H-InvDB:HIX0163956 H-InvDB:HIX0163957 H-InvDB:HIX0163958
            H-InvDB:HIX0163959 H-InvDB:HIX0163960 H-InvDB:HIX0163961
            H-InvDB:HIX0163962 H-InvDB:HIX0163963 H-InvDB:HIX0164023
            neXtProt:NX_Q6QN14 InParanoid:Q6QN14 Genevestigator:Q6QN14
            Uniprot:Q6QN14
        Length = 398

 Score = 369 (135.0 bits), Expect = 3.0e-33, P = 3.0e-33
 Identities = 78/211 (36%), Positives = 115/211 (54%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGKS 646
             GL N GN+CY N  LQCL +TPPL  Y L   HS+ C +   C  C ++  I RA     
Sbjct:    81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALH--- 137

Query:   647 PLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLI 706
               +P  ++   Q++ +    G++EDAHEFL + +D M+  C+   G         +TTLI
Sbjct:   138 --NPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLP--GHKQVDHHSKDTTLI 193

Query:   707 GLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGENKY 766
                FGGY RS+IKC  CHG S+  +  +D+ ++I+    ++++AL +    E L+GEN Y
Sbjct:   194 HQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQA-AQSVQQALEQLVKPEELNGENAY 252

Query:   767 KCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
              C  C     A K LT+  +  +L + LKRF
Sbjct:   253 HCGVCLQRAPASKTLTLHTSAKVLILVLKRF 283


>RGD|1309937 [details] [associations]
            symbol:Usp36 "ubiquitin specific peptidase 36" species:10116
            "Rattus norvegicus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 RGD:1309937 GO:GO:0008234
            GO:GO:0006511 GO:GO:0004221 OrthoDB:EOG4V9TQ1
            GeneTree:ENSGT00670000097591 IPI:IPI00947986
            Ensembl:ENSRNOT00000064450 UCSC:RGD:1309937 ArrayExpress:D3ZNQ4
            Uniprot:D3ZNQ4
        Length = 1005

 Score = 393 (143.4 bits), Expect = 3.3e-33, P = 3.3e-33
 Identities = 79/225 (35%), Positives = 121/225 (53%)

Query:   578 WNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENL 637
             W +V     GL N GN+C+ N  +QCL  +PP++   L   H     +  +C  C ++N 
Sbjct:   114 WERVFRVGAGLHNLGNTCFLNSTIQCLTVSPPVSQALLATEHHPSRHQGSFCMLCVMQNH 173

Query:   638 ILRA-KDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNAS 696
             +++A  +  + + P+  +  L+ I      G +EDAHEFLRY ID MQ  C+   G    
Sbjct:   174 MVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLN--GYAKL 231

Query:   697 GPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTG 756
                   TTL+   FGGYLRS++KC+ C   S+  +  +D+ +EI     N+  AL  +  
Sbjct:   232 DRQTQATTLVHQIFGGYLRSRVKCSVCRSVSDTYDPYLDIALEIR-QAANIVRALELFVK 290

Query:   757 TEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFS 801
             +++L GEN Y C +CK    A K+ +I    N+LT++LKRF  FS
Sbjct:   291 SDVLSGENAYMCAKCKKKVPASKRFSIHRTSNVLTLSLKRFANFS 335


>UNIPROTKB|C9JLJ4 [details] [associations]
            symbol:USP17L13 "Ubiquitin carboxyl-terminal hydrolase
            17-like protein 13" species:9606 "Homo sapiens" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005783 "endoplasmic
            reticulum" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            Pfam:PF04774 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            InterPro:IPR006861 HOGENOM:HOG000144638 OrthoDB:EOG42V8G0
            EMBL:AC108519 IPI:IPI00937832 RefSeq:NP_001243784.1
            UniGene:Hs.741127 ProteinModelPortal:C9JLJ4 SMR:C9JLJ4
            STRING:C9JLJ4 Ensembl:ENST00000429667 GeneID:100287238
            KEGG:hsa:100287238 CTD:100287238 HGNC:HGNC:44441
            GenomeRNAi:100287238 NextBio:20776989 ArrayExpress:C9JLJ4
            Uniprot:C9JLJ4
        Length = 530

 Score = 373 (136.4 bits), Expect = 2.6e-32, P = 2.6e-32
 Identities = 79/211 (37%), Positives = 116/211 (54%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGKS 646
             GL N GN+CY N  LQCL +TPPL  Y L   HS+ C +   C  C ++  I RA     
Sbjct:    81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALH--- 137

Query:   647 PLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLI 706
               +P  ++   Q++ +    G++EDAHEFL + +D M+  C+         P +D TTLI
Sbjct:   138 --NPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLP-GHKQVDHPSKD-TTLI 193

Query:   707 GLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGENKY 766
                FGGY RS+IKC  CHG S+  +  +D+ ++I+    ++++AL +    E L+GEN Y
Sbjct:   194 HQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQA-AQSVQQALEQLVKPEELNGENAY 252

Query:   767 KCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
              C  C     A K LT+  +  +L + LKRF
Sbjct:   253 HCGVCLQRAPASKTLTLHTSAKVLILVLKRF 283


>UNIPROTKB|C9JPN9 [details] [associations]
            symbol:USP17L12 "Ubiquitin carboxyl-terminal hydrolase
            17-like protein 12" species:9606 "Homo sapiens" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005783 "endoplasmic
            reticulum" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            Pfam:PF04774 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            InterPro:IPR006861 HOGENOM:HOG000144638 OrthoDB:EOG42V8G0
            EMBL:AC108519 IPI:IPI00935524 RefSeq:NP_001243782.1
            UniGene:Hs.741128 ProteinModelPortal:C9JPN9 SMR:C9JPN9
            STRING:C9JPN9 Ensembl:ENST00000415041 GeneID:100287205
            KEGG:hsa:100287205 CTD:100287205 GeneCards:GC04P009225
            HGNC:HGNC:44440 GenomeRNAi:100287205 NextBio:20776956
            Uniprot:C9JPN9
        Length = 530

 Score = 373 (136.4 bits), Expect = 2.6e-32, P = 2.6e-32
 Identities = 78/211 (36%), Positives = 116/211 (54%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGKS 646
             GL N GN+CY N  LQCL +TPPL  Y L   HS+ C +   C  C ++  I RA     
Sbjct:    81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALH--- 137

Query:   647 PLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLI 706
               +P  ++   Q++ +    G++EDAHEFL + +D M+  C+   G         +TTLI
Sbjct:   138 --NPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLP--GHKQVDHHSKDTTLI 193

Query:   707 GLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGENKY 766
                FGGY RS+IKC  CHG S+  +  +D+ ++I+    ++++AL +    E L+GEN Y
Sbjct:   194 HQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQA-AQSVQQALEQLVKPEELNGENAY 252

Query:   767 KCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
              C  C     A K LT++ +  +L + LKRF
Sbjct:   253 HCGVCLQRAPASKMLTLLTSAKVLILVLKRF 283


>UNIPROTKB|D6R901 [details] [associations]
            symbol:USP17L21 "Ubiquitin carboxyl-terminal hydrolase
            17-like protein 21" species:9606 "Homo sapiens" [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005783 "endoplasmic
            reticulum" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            Pfam:PF04774 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            InterPro:IPR006861 HOGENOM:HOG000144638 OrthoDB:EOG42V8G0
            EMBL:AC108519 IPI:IPI00936851 RefSeq:NP_001243791.1
            UniGene:Hs.741136 ProteinModelPortal:D6R901 SMR:D6R901
            Ensembl:ENST00000506414 GeneID:100287478 KEGG:hsa:100287478
            CTD:100287478 GeneCards:GC04P009264 HGNC:HGNC:44449 OMA:VICALRQ
            GenomeRNAi:100287478 NextBio:20777229 Uniprot:D6R901
        Length = 530

 Score = 373 (136.4 bits), Expect = 2.6e-32, P = 2.6e-32
 Identities = 78/211 (36%), Positives = 116/211 (54%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGKS 646
             GL N GN+CY N  LQCL +TPPL  Y L   HS+ C +   C  C ++  I RA     
Sbjct:    81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALH--- 137

Query:   647 PLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLI 706
               +P  ++   Q++ +    G++EDAHEFL + +D M+  C+   G         +TTLI
Sbjct:   138 --NPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLP--GHKQVDHHSKDTTLI 193

Query:   707 GLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGENKY 766
                FGGY RS+IKC  CHG S+  +  +D+ ++I+    ++++AL +    E L+GEN Y
Sbjct:   194 HQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQA-AQSVQQALEQLVKPEELNGENAY 252

Query:   767 KCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
              C  C     A K LT++ +  +L + LKRF
Sbjct:   253 HCGVCLQRAPASKMLTLLTSAKVLILVLKRF 283


>UNIPROTKB|I3L0E4 [details] [associations]
            symbol:USP17L13 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 Pfam:PF04774 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 InterPro:IPR006861 EMBL:AC108519
            ProteinModelPortal:I3L0E4 SMR:I3L0E4 Ensembl:ENST00000421288
            OMA:PELEECG Uniprot:I3L0E4
        Length = 530

 Score = 373 (136.4 bits), Expect = 2.6e-32, P = 2.6e-32
 Identities = 79/211 (37%), Positives = 116/211 (54%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGKS 646
             GL N GN+CY N  LQCL +TPPL  Y L   HS+ C +   C  C ++  I RA     
Sbjct:    81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALH--- 137

Query:   647 PLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLI 706
               +P  ++   Q++ +    G++EDAHEFL + +D M+  C+         P +D TTLI
Sbjct:   138 --NPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLP-GHKQVDHPSKD-TTLI 193

Query:   707 GLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGENKY 766
                FGGY RS+IKC  CHG S+  +  +D+ ++I+    ++++AL +    E L+GEN Y
Sbjct:   194 HQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQA-AQSVQQALEQLVKPEELNGENAY 252

Query:   767 KCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
              C  C     A K LT+  +  +L + LKRF
Sbjct:   253 HCGVCLQRAPASKTLTLHTSAKVLILVLKRF 283


>UNIPROTKB|E2R2N1 [details] [associations]
            symbol:LOC609437 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 Pfam:PF04774 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 InterPro:IPR006861 GeneTree:ENSGT00670000097591
            EMBL:AAEX03010567 Ensembl:ENSCAFT00000013563
            Ensembl:ENSCAFT00000024077 OMA:CQGVSDT Uniprot:E2R2N1
        Length = 534

 Score = 373 (136.4 bits), Expect = 3.1e-32, P = 3.1e-32
 Identities = 78/222 (35%), Positives = 119/222 (53%)

Query:   577 NWNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELEN 636
             +W  +     GL N GN+CY N  LQCL +T PL +Y L   H   C ++  C  C L+ 
Sbjct:    71 SWKSLSQVGAGLQNMGNTCYVNATLQCLTYTEPLASYMLSQQHGTTCRRQTSCMLCTLQT 130

Query:   637 LILRAKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNAS 696
              ++R         P  +L  L  + +     ++EDAHE+L + +D MQ  C+ E  +  S
Sbjct:   131 HLMRVL-----CHPGRVLRPLPLLLAAFHRHKQEDAHEYLMFILDAMQQACLPEDKL--S 183

Query:   697 GP-LEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYT 755
              P    ++TLI   FGGY RS+I+C  C G S   E  +D++++I GD  ++ +AL +  
Sbjct:   184 DPECPQDSTLIQQLFGGYWRSQIQCLHCQGISSTLEPYLDISLDI-GDAHSVSQALEQLV 242

Query:   756 GTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
               E+L+GEN Y C +C     A K LT+  +P +L + L+RF
Sbjct:   243 KPELLEGENAYHCSKCLEKVPASKVLTLHTSPKVLILVLRRF 284


>UNIPROTKB|A8MUK1 [details] [associations]
            symbol:USP17L5 "Ubiquitin carboxyl-terminal hydrolase
            17-like protein 5" species:9606 "Homo sapiens" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0006915 "apoptotic process" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 Pfam:PF04774
            GO:GO:0005634 GO:GO:0006915 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 EMBL:AC116655 InterPro:IPR006861 HPA:HPA045642
            HOGENOM:HOG000144638 HOVERGEN:HBG007129 KO:K11845 IPI:IPI00880103
            RefSeq:NP_001229258.1 UniGene:Hs.740243 ProteinModelPortal:A8MUK1
            SMR:A8MUK1 STRING:A8MUK1 PRIDE:A8MUK1 Ensembl:ENST00000507227
            GeneID:728386 KEGG:hsa:728386 CTD:728386 GeneCards:GC04P009214
            GeneCards:GC04P009342 HGNC:HGNC:37177 neXtProt:NX_A8MUK1
            PharmGKB:PA165664776 InParanoid:A8MUK1 OMA:CASADER
            GenomeRNAi:728386 NextBio:127023 ArrayExpress:A8MUK1
            Genevestigator:A8MUK1 Uniprot:A8MUK1
        Length = 530

 Score = 369 (135.0 bits), Expect = 8.7e-32, P = 8.7e-32
 Identities = 78/211 (36%), Positives = 115/211 (54%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGKS 646
             GL N GN+CY N  LQCL +TPPL  Y L   HS+ C +   C  C ++  I RA     
Sbjct:    81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALH--- 137

Query:   647 PLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLI 706
               +P  ++   Q++ +    G++EDAHEFL + +D M+  C+   G         +TTLI
Sbjct:   138 --NPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLP--GHKQVDHHSKDTTLI 193

Query:   707 GLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGENKY 766
                FGGY RS+IKC  CHG S+  +  +D+ ++I+    ++++AL +    E L+GEN Y
Sbjct:   194 HQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQA-AQSVQQALEQLAKPEELNGENAY 252

Query:   767 KCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
              C  C     A K LT+  +  +L + LKRF
Sbjct:   253 HCGVCLQRAPASKTLTLHTSAKVLILVLKRF 283


>UNIPROTKB|C9J2P7 [details] [associations]
            symbol:USP17L15 "Ubiquitin carboxyl-terminal hydrolase
            17-like protein 15" species:9606 "Homo sapiens" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005783 "endoplasmic
            reticulum" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            Pfam:PF04774 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            InterPro:IPR006861 HOGENOM:HOG000144638 OrthoDB:EOG42V8G0
            EMBL:AC108519 IPI:IPI00937986 ProteinModelPortal:C9J2P7 SMR:C9J2P7
            STRING:C9J2P7 Ensembl:ENST00000456464 GeneCards:GC04P009236
            HGNC:HGNC:44443 OMA:KISACVV Uniprot:C9J2P7
        Length = 530

 Score = 369 (135.0 bits), Expect = 8.7e-32, P = 8.7e-32
 Identities = 78/211 (36%), Positives = 115/211 (54%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGKS 646
             GL N GN+CY N  LQCL +TPPL  Y L   HS+ C +   C  C ++  I RA     
Sbjct:    81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALH--- 137

Query:   647 PLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLI 706
               +P  ++   Q++ +    G++EDAHEFL + +D M+  C+   G         +TTLI
Sbjct:   138 --NPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLP--GHKQVDHHSKDTTLI 193

Query:   707 GLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGENKY 766
                FGGY RS+IKC  CHG S+  +  +D+ ++I+    ++++AL +    E L+GEN Y
Sbjct:   194 HQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQA-AQSVQQALEQLVKPEELNGENAY 252

Query:   767 KCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
              C  C     A K LT+  +  +L + LKRF
Sbjct:   253 HCGVCLQRAPASKTLTLHTSAKVLILVLKRF 283


>UNIPROTKB|C9JVI0 [details] [associations]
            symbol:USP17L11 "Ubiquitin carboxyl-terminal hydrolase
            17-like protein 11" species:9606 "Homo sapiens" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005783 "endoplasmic
            reticulum" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            Pfam:PF04774 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            InterPro:IPR006861 HOGENOM:HOG000144638 OrthoDB:EOG42V8G0
            EMBL:AC108519 IPI:IPI00938219 RefSeq:NP_001243783.1
            UniGene:Hs.722783 ProteinModelPortal:C9JVI0 SMR:C9JVI0
            STRING:C9JVI0 Ensembl:ENST00000457736 GeneID:100287178
            KEGG:hsa:100287178 UCSC:uc021xlk.1 CTD:100287178
            GeneCards:GC04P009217 HGNC:HGNC:44439 OMA:VERDTQE
            GenomeRNAi:100287178 NextBio:20776929 Uniprot:C9JVI0
        Length = 530

 Score = 369 (135.0 bits), Expect = 8.7e-32, P = 8.7e-32
 Identities = 78/211 (36%), Positives = 115/211 (54%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGKS 646
             GL N GN+CY N  LQCL +TPPL  Y L   HS+ C +   C  C ++  I RA     
Sbjct:    81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALH--- 137

Query:   647 PLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLI 706
               +P  ++   Q++ +    G++EDAHEFL + +D M+  C+   G         +TTLI
Sbjct:   138 --NPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLP--GHKQVDHHSKDTTLI 193

Query:   707 GLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGENKY 766
                FGGY RS+IKC  CHG S+  +  +D+ ++I+    ++++AL +    E L+GEN Y
Sbjct:   194 HQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQA-AQSVQQALEQLVKPEELNGENAY 252

Query:   767 KCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
              C  C     A K LT+  +  +L + LKRF
Sbjct:   253 HCGVCLQRAPASKTLTLHTSAKVLILVLKRF 283


>UNIPROTKB|D6R9N7 [details] [associations]
            symbol:USP17L18 "Ubiquitin carboxyl-terminal hydrolase
            17-like protein 18" species:9606 "Homo sapiens" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005783 "endoplasmic
            reticulum" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            Pfam:PF04774 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            InterPro:IPR006861 HOGENOM:HOG000144638 OrthoDB:EOG42V8G0
            EMBL:AC108519 IPI:IPI00937459 RefSeq:NP_001243788.1
            UniGene:Hs.741138 ProteinModelPortal:D6R9N7 SMR:D6R9N7
            Ensembl:ENST00000504209 GeneID:100287364 KEGG:hsa:100287364
            UCSC:uc011bwp.2 CTD:100287364 GeneCards:GC04P009250 HGNC:HGNC:44446
            OMA:CEFIAIN GenomeRNAi:100287364 NextBio:20777115 Uniprot:D6R9N7
        Length = 530

 Score = 369 (135.0 bits), Expect = 8.7e-32, P = 8.7e-32
 Identities = 78/211 (36%), Positives = 115/211 (54%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGKS 646
             GL N GN+CY N  LQCL +TPPL  Y L   HS+ C +   C  C ++  I RA     
Sbjct:    81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALH--- 137

Query:   647 PLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLI 706
               +P  ++   Q++ +    G++EDAHEFL + +D M+  C+   G         +TTLI
Sbjct:   138 --NPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLP--GHKQVDHHSKDTTLI 193

Query:   707 GLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGENKY 766
                FGGY RS+IKC  CHG S+  +  +D+ ++I+    ++++AL +    E L+GEN Y
Sbjct:   194 HQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQA-AQSVQQALEQLVKPEELNGENAY 252

Query:   767 KCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
              C  C     A K LT+  +  +L + LKRF
Sbjct:   253 HCGVCLQRAPASKTLTLHTSAKVLILVLKRF 283


>UNIPROTKB|D6RA61 [details] [associations]
            symbol:USP17L22 "Ubiquitin carboxyl-terminal hydrolase
            17-like protein 22" species:9606 "Homo sapiens" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005783 "endoplasmic
            reticulum" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            Pfam:PF04774 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            InterPro:IPR006861 HOGENOM:HOG000144638 OrthoDB:EOG42V8G0 KO:K11845
            EMBL:AC108519 IPI:IPI00936680 RefSeq:NP_001243792.1
            UniGene:Hs.723053 ProteinModelPortal:D6RA61 SMR:D6RA61
            Ensembl:ENST00000511280 GeneID:100287513 KEGG:hsa:100287513
            CTD:100287513 GeneCards:GC04P009271 HGNC:HGNC:44450 OMA:DEENAYH
            GenomeRNAi:100287513 NextBio:20777264 Uniprot:D6RA61
        Length = 530

 Score = 369 (135.0 bits), Expect = 8.7e-32, P = 8.7e-32
 Identities = 78/211 (36%), Positives = 115/211 (54%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGKS 646
             GL N GN+CY N  LQCL +TPPL  Y L   HS+ C +   C  C ++  I RA     
Sbjct:    81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALH--- 137

Query:   647 PLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLI 706
               +P  ++   Q++ +    G++EDAHEFL + +D M+  C+   G         +TTLI
Sbjct:   138 --NPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLP--GHKQVDHHSKDTTLI 193

Query:   707 GLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGENKY 766
                FGGY RS+IKC  CHG S+  +  +D+ ++I+    ++++AL +    E L+GEN Y
Sbjct:   194 HQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQA-AQSVQQALEQLVKPEELNGENAY 252

Query:   767 KCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
              C  C     A K LT+  +  +L + LKRF
Sbjct:   253 HCGVCLQRAPASKTLTLHTSAKVLILVLKRF 283


>UNIPROTKB|D6RBQ6 [details] [associations]
            symbol:USP17L17 "Ubiquitin carboxyl-terminal hydrolase
            17-like protein 17" species:9606 "Homo sapiens" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005783 "endoplasmic
            reticulum" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            Pfam:PF04774 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            InterPro:IPR006861 HOGENOM:HOG000144638 OrthoDB:EOG42V8G0
            EMBL:AC108519 IPI:IPI00937633 RefSeq:NP_001243786.1
            UniGene:Hs.741129 ProteinModelPortal:D6RBQ6 SMR:D6RBQ6
            Ensembl:ENST00000511568 GeneID:100287327 KEGG:hsa:100287327
            CTD:100287327 GeneCards:GC04P009248 HGNC:HGNC:44445 OMA:QNLKTTK
            GenomeRNAi:100287327 NextBio:20777078 Uniprot:D6RBQ6
        Length = 530

 Score = 369 (135.0 bits), Expect = 8.7e-32, P = 8.7e-32
 Identities = 78/211 (36%), Positives = 115/211 (54%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGKS 646
             GL N GN+CY N  LQCL +TPPL  Y L   HS+ C +   C  C ++  I RA     
Sbjct:    81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALH--- 137

Query:   647 PLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLI 706
               +P  ++   Q++ +    G++EDAHEFL + +D M+  C+   G         +TTLI
Sbjct:   138 --NPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLP--GHKQVDHHSKDTTLI 193

Query:   707 GLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGENKY 766
                FGGY RS+IKC  CHG S+  +  +D+ ++I+    ++++AL +    E L+GEN Y
Sbjct:   194 HQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQA-AQSVQQALEQLVKPEELNGENAY 252

Query:   767 KCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
              C  C     A K LT+  +  +L + LKRF
Sbjct:   253 HCGVCLQRAPASKTLTLHTSAKVLILVLKRF 283


>UNIPROTKB|D6RCP7 [details] [associations]
            symbol:USP17L19 "Ubiquitin carboxyl-terminal hydrolase
            17-like protein 19" species:9606 "Homo sapiens" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005783 "endoplasmic
            reticulum" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            Pfam:PF04774 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            InterPro:IPR006861 HOGENOM:HOG000144638 OrthoDB:EOG42V8G0
            EMBL:AC108519 IPI:IPI00937246 RefSeq:NP_001243789.1
            UniGene:Hs.741137 ProteinModelPortal:D6RCP7 SMR:D6RCP7
            Ensembl:ENST00000515566 GeneID:100287404 KEGG:hsa:100287404
            CTD:100287404 GeneCards:GC04P009255 HGNC:HGNC:44447 OMA:EQLMKPE
            GenomeRNAi:100287404 NextBio:20777155 Uniprot:D6RCP7
        Length = 530

 Score = 369 (135.0 bits), Expect = 8.7e-32, P = 8.7e-32
 Identities = 78/211 (36%), Positives = 115/211 (54%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGKS 646
             GL N GN+CY N  LQCL +TPPL  Y L   HS+ C +   C  C ++  I RA     
Sbjct:    81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALH--- 137

Query:   647 PLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLI 706
               +P  ++   Q++ +    G++EDAHEFL + +D M+  C+   G         +TTLI
Sbjct:   138 --NPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLP--GHKQVDHHSKDTTLI 193

Query:   707 GLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGENKY 766
                FGGY RS+IKC  CHG S+  +  +D+ ++I+    ++++AL +    E L+GEN Y
Sbjct:   194 HQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQA-AQSVQQALEQLVKPEELNGENAY 252

Query:   767 KCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
              C  C     A K LT+  +  +L + LKRF
Sbjct:   253 HCGVCLQRAPASKTLTLHTSAKVLILVLKRF 283


>UNIPROTKB|D6RJB6 [details] [associations]
            symbol:USP17L20 "Ubiquitin carboxyl-terminal hydrolase
            17-like protein 20" species:9606 "Homo sapiens" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005783 "endoplasmic
            reticulum" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            Pfam:PF04774 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            InterPro:IPR006861 HOGENOM:HOG000144638 OrthoDB:EOG42V8G0
            EMBL:AC108519 UniGene:Hs.722783 IPI:IPI00967528
            RefSeq:NP_001243790.1 UniGene:Hs.741133 ProteinModelPortal:D6RJB6
            SMR:D6RJB6 Ensembl:ENST00000506151 GeneID:100287441
            KEGG:hsa:100287441 CTD:100287441 GeneCards:GC04P009259
            HGNC:HGNC:44448 OMA:NGENAYQ GenomeRNAi:100287441 NextBio:20777192
            Uniprot:D6RJB6
        Length = 530

 Score = 369 (135.0 bits), Expect = 8.7e-32, P = 8.7e-32
 Identities = 78/211 (36%), Positives = 115/211 (54%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGKS 646
             GL N GN+CY N  LQCL +TPPL  Y L   HS+ C +   C  C ++  I RA     
Sbjct:    81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALH--- 137

Query:   647 PLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLI 706
               +P  ++   Q++ +    G++EDAHEFL + +D M+  C+   G         +TTLI
Sbjct:   138 --NPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLP--GHKQVDHHSKDTTLI 193

Query:   707 GLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGENKY 766
                FGGY RS+IKC  CHG S+  +  +D+ ++I+    ++++AL +    E L+GEN Y
Sbjct:   194 HQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQA-AQSVQQALEQLVKPEELNGENAY 252

Query:   767 KCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
              C  C     A K LT+  +  +L + LKRF
Sbjct:   253 HCGVCLQRAPASKTLTLHTSAKVLILVLKRF 283


>UNIPROTKB|Q0WX57 [details] [associations]
            symbol:USP17L24 "Ubiquitin carboxyl-terminal hydrolase
            17-like protein 24" species:9606 "Homo sapiens" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0006915 "apoptotic process" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 Pfam:PF04774
            GO:GO:0006915 GO:GO:0005730 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 eggNOG:COG5533 EMBL:AC116655 InterPro:IPR006861
            HPA:HPA045642 HOVERGEN:HBG007129 OrthoDB:EOG42V8G0 KO:K11845
            GeneCards:GC04P009214 UniGene:Hs.722783 UniGene:Hs.741133
            UniGene:Hs.723053 EMBL:AF544011 EMBL:AF544012 EMBL:AY188990
            IPI:IPI00736155 RefSeq:NP_001229255.1 RefSeq:NP_001229256.1
            RefSeq:NP_001229257.1 RefSeq:NP_001229259.1 RefSeq:NP_001229260.1
            RefSeq:NP_001229261.1 RefSeq:NP_001243796.1 UniGene:Hs.553810
            UniGene:Hs.631527 ProteinModelPortal:Q0WX57 SMR:Q0WX57
            IntAct:Q0WX57 STRING:Q0WX57 MEROPS:C19.023 PRIDE:Q0WX57
            GeneID:728369 GeneID:728373 GeneID:728379 GeneID:728393
            GeneID:728400 GeneID:728405 GeneID:728419 KEGG:hsa:728369
            KEGG:hsa:728373 KEGG:hsa:728379 KEGG:hsa:728393 KEGG:hsa:728400
            KEGG:hsa:728405 KEGG:hsa:728419 UCSC:uc021xll.1 CTD:728369
            CTD:728373 CTD:728379 CTD:728393 CTD:728400 CTD:728405 CTD:728419
            GeneCards:GC04P009360 GeneCards:GC04U901534 H-InvDB:HIX0163954
            H-InvDB:HIX0163955 HGNC:HGNC:44453 HGNC:HGNC:44452 HGNC:HGNC:44454
            HGNC:HGNC:44455 HGNC:HGNC:44456 HGNC:HGNC:44457 HGNC:HGNC:44458
            MIM:607011 neXtProt:NX_Q0WX57 InParanoid:Q0WX57 OMA:DGENAYH
            NextBio:126977 ArrayExpress:Q0WX57 Genevestigator:Q0WX57
            Uniprot:Q0WX57
        Length = 530

 Score = 369 (135.0 bits), Expect = 8.7e-32, P = 8.7e-32
 Identities = 78/211 (36%), Positives = 115/211 (54%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGKS 646
             GL N GN+CY N  LQCL +TPPL  Y L   HS+ C +   C  C ++  I RA     
Sbjct:    81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALH--- 137

Query:   647 PLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLI 706
               +P  ++   Q++ +    G++EDAHEFL + +D M+  C+   G         +TTLI
Sbjct:   138 --NPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLP--GHKQVDHHSKDTTLI 193

Query:   707 GLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGENKY 766
                FGGY RS+IKC  CHG S+  +  +D+ ++I+    ++++AL +    E L+GEN Y
Sbjct:   194 HQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQA-AQSVQQALEQLVKPEELNGENAY 252

Query:   767 KCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
              C  C     A K LT+  +  +L + LKRF
Sbjct:   253 HCGVCLQRAPASKTLTLHTSAKVLILVLKRF 283


>TAIR|locus:2174403 [details] [associations]
            symbol:UBP23 "ubiquitin-specific protease 23"
            species:3702 "Arabidopsis thaliana" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0009165 "nucleotide
            biosynthetic process" evidence=RCA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 EMBL:CP002688 GenomeReviews:BA000015_GR
            GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 EMBL:AB013396
            eggNOG:COG5077 HSSP:P54578 KO:K11855 EMBL:AF302671 IPI:IPI00532960
            RefSeq:NP_568873.1 UniGene:At.22531 ProteinModelPortal:Q9FPS4
            SMR:Q9FPS4 STRING:Q9FPS4 MEROPS:C19.A12 PaxDb:Q9FPS4 PRIDE:Q9FPS4
            EnsemblPlants:AT5G57990.1 GeneID:835910 KEGG:ath:AT5G57990
            GeneFarm:1994 TAIR:At5g57990 HOGENOM:HOG000078724 InParanoid:Q9FPS4
            OMA:AHEYMIN PhylomeDB:Q9FPS4 ProtClustDB:CLSN2716507
            Genevestigator:Q9FPS4 Uniprot:Q9FPS4
        Length = 859

 Score = 377 (137.8 bits), Expect = 1.4e-31, P = 1.4e-31
 Identities = 80/214 (37%), Positives = 122/214 (57%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGKS 646
             GL N GN+C+ N VLQCL +T PL A      H K C    +C  C ++  +  A+    
Sbjct:   108 GLQNLGNTCFLNSVLQCLTYTEPLAATLQTAAHQKYCHVAGFCALCAIQKHVRTARQANG 167

Query:   647 P-LSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTL 705
               L+P  ++S L+ I     N R+EDAHE++   ++ M   C   +GV +        +L
Sbjct:   168 RILAPKDLVSNLRCISRNFRNCRQEDAHEYMINLLECMHK-CSLPSGVPSESSDAYRRSL 226

Query:   706 IGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILD-GEN 764
             +   FGG LRS++KC +C   S + +  +DL+++I     +L+ AL R+T  E+LD G  
Sbjct:   227 VHKIFGGSLRSQVKCEQCSHCSNKFDPFLDLSLDIS-KADSLQRALSRFTAVELLDNGAK 285

Query:   765 KYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
              Y+C+RCK   KAKK+LT+ +AP +LT+ LKRF+
Sbjct:   286 VYQCERCKQKVKAKKQLTVSKAPYVLTVHLKRFE 319


>UNIPROTKB|J9PAN5 [details] [associations]
            symbol:LOC609268 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 Pfam:PF04774 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 InterPro:IPR006861 OMA:EQLMKPE
            GeneTree:ENSGT00670000097591 EMBL:AAEX03010544
            Ensembl:ENSCAFT00000039099 Uniprot:J9PAN5
        Length = 531

 Score = 360 (131.8 bits), Expect = 1.3e-30, P = 1.3e-30
 Identities = 77/222 (34%), Positives = 117/222 (52%)

Query:   577 NWNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELEN 636
             +W  +     GL N GN+CY N  LQCL +T PL +Y L   H   C ++  C  C L+ 
Sbjct:    71 SWRSLSQVGAGLQNMGNTCYVNATLQCLTYTEPLASYMLSQQHGTTCRRQTSCMLCTLQA 130

Query:   637 LILRAKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNAS 696
              + R         P  +L  L  + +     ++EDAHE+L + +D MQ  C+ E  +  S
Sbjct:   131 HLTRVL-----CHPGRVLRPLPLLLAAFHRHKQEDAHEYLMFILDAMQQACLPEDKL--S 183

Query:   697 GP-LEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYT 755
              P    ++TLI   FGGY RS+I+C  C G S   E  +D++++I G   ++ +AL +  
Sbjct:   184 DPECPQDSTLIQQLFGGYWRSQIQCLHCQGISSTLEPYLDISLDI-GAAHSISQALEQLM 242

Query:   756 GTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
               E+L+GEN Y C +C     A K LT+  +P +L + L+RF
Sbjct:   243 KPELLEGENAYHCSKCLEKVPASKVLTLHTSPKVLILVLRRF 284


>UNIPROTKB|C9JJH3 [details] [associations]
            symbol:USP17L10 "Ubiquitin carboxyl-terminal hydrolase
            17-like protein 10" species:9606 "Homo sapiens" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005783 "endoplasmic
            reticulum" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            Pfam:PF04774 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            InterPro:IPR006861 HOGENOM:HOG000144638 OrthoDB:EOG42V8G0
            EMBL:AC108519 IPI:IPI00935891 RefSeq:NP_001243781.1
            UniGene:Hs.741130 ProteinModelPortal:C9JJH3 SMR:C9JJH3
            STRING:C9JJH3 PhosphoSite:C9JJH3 Ensembl:ENST00000417945
            GeneID:100287144 KEGG:hsa:100287144 CTD:100287144
            GeneCards:GC04P009213 HGNC:HGNC:44438 GenomeRNAi:100287144
            NextBio:20776895 Uniprot:C9JJH3
        Length = 530

 Score = 358 (131.1 bits), Expect = 2.1e-30, P = 2.1e-30
 Identities = 77/211 (36%), Positives = 113/211 (53%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGKS 646
             GL N GN+CY N  LQCL + PPL  Y L   HS+ C +   C  C ++  I RA     
Sbjct:    81 GLQNMGNTCYVNASLQCLTYKPPLANYMLFREHSQTCHRHKGCMLCTMQAHITRALH--- 137

Query:   647 PLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLI 706
                P  ++   Q++ +    G++EDAHEFL + +D M+  C+   G         +TTLI
Sbjct:   138 --IPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMRKACLP--GHKQVDRHSKDTTLI 193

Query:   707 GLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGENKY 766
                FGGY RS+IKC  CHG S+  +  +D+ ++I+    ++++AL +    E L+GEN Y
Sbjct:   194 HQIFGGYWRSQIKCLHCHGISDTFDPYLDIALDIQA-AQSVQQALEQLVKPEELNGENAY 252

Query:   767 KCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
              C  C     A K LT+  +  +L + LKRF
Sbjct:   253 HCGVCLQRAPASKTLTLHNSAKVLILVLKRF 283


>UNIPROTKB|J9NSR8 [details] [associations]
            symbol:LOC609310 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 Pfam:PF04774 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 InterPro:IPR006861 GeneTree:ENSGT00670000097591
            OMA:PELEECG EMBL:AAEX03010573 Ensembl:ENSCAFT00000038090
            Uniprot:J9NSR8
        Length = 531

 Score = 358 (131.1 bits), Expect = 2.2e-30, P = 2.2e-30
 Identities = 76/221 (34%), Positives = 117/221 (52%)

Query:   577 NWNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELEN 636
             +W  +     GL N GN+CY N  LQCL +T PL +Y L   H   C ++  C  C L+ 
Sbjct:    71 SWKSLSQVGAGLQNMGNTCYVNATLQCLTYTEPLASYMLSQQHGTTCRRQTSCMLCTLQA 130

Query:   637 LILRAKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNAS 696
              + R         P  +L  L  + +     ++EDAHE+L + +D MQ  C+ E  ++  
Sbjct:   131 HLTRVL-----CHPGRVLRPLPLLLAAFHRHKQEDAHEYLMFILDAMQQACLPEDKLSDP 185

Query:   697 GPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTG 756
                +D +TLI   F GY RS+I+C  C G S   E  +D++++I GD  ++ +AL +   
Sbjct:   186 ERPQD-STLIQQLFEGYWRSQIQCLHCQGISSTLEPYLDISLDI-GDAHSVSQALEQLVK 243

Query:   757 TEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
              E+L+GEN Y C +C     A K LT+  +P +L + L+RF
Sbjct:   244 PELLEGENAYHCRKCLEKVPASKVLTLHTSPKVLILVLRRF 284


>MGI|MGI:107699 [details] [associations]
            symbol:Usp17la "ubiquitin specific peptidase 17-like A"
            species:10090 "Mus musculus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=IDA] [GO:0016787
            "hydrolase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 MGI:MGI:107699 GO:GO:0006511 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 eggNOG:COG5533 HOGENOM:HOG000144638
            HOVERGEN:HBG007129 KO:K11845 GeneTree:ENSGT00670000097591
            EMBL:U41636 IPI:IPI00117061 PIR:JC6133 RefSeq:NP_031913.1
            UniGene:Mm.389929 ProteinModelPortal:Q61068 SMR:Q61068
            STRING:Q61068 MEROPS:C19.031 PRIDE:Q61068
            Ensembl:ENSMUST00000067695 GeneID:13531 KEGG:mmu:13531
            UCSC:uc009iwz.2 CTD:13531 InParanoid:Q61068 NextBio:284126
            Bgee:Q61068 CleanEx:MM_DUB1 Genevestigator:Q61068
            GermOnline:ENSMUSG00000054568 Uniprot:Q61068
        Length = 526

 Score = 356 (130.4 bits), Expect = 3.4e-30, P = 3.4e-30
 Identities = 80/229 (34%), Positives = 120/229 (52%)

Query:   577 NWNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELEN 636
             +W   +   CGL N GNSCY N  LQCL  TPPL  Y L   HS+ C   + C  C +E 
Sbjct:    42 SWESPQGPGCGLQNTGNSCYLNAALQCLTHTPPLADYMLSQEHSQTCCSPEGCKLCAMEA 101

Query:   637 LI----LRAKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAG 692
             L+    L +  G   + P  IL+      S     ++EDAHEFL + ++TM   C++   
Sbjct:   102 LVTQSLLHSHSG-DVMKPSHILT------SAFHKHQQEDAHEFLMFTLETMHESCLQVH- 153

Query:   693 VNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALR 752
                S P  ++++ I   FGG+ RS+IKC  C G S+  +R +D+ ++I     ++++AL 
Sbjct:   154 -RQSKPTSEDSSPIHDIFGGWWRSQIKCLLCQGTSDTYDRFLDIPLDISS-AQSVKQALW 211

Query:   753 RYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFS 801
                 +E L G+N Y C +C+    A K L +  AP +L + L RF  F+
Sbjct:   212 DTEKSEELCGDNAYYCGKCRQKMPASKTLHVHIAPKVLMVVLNRFSAFT 260


>UNIPROTKB|F1PQJ0 [details] [associations]
            symbol:LOC100686685 "Uncharacterized protein" species:9615
            "Canis lupus familiaris" [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS50235
            GO:GO:0006511 GO:GO:0004221 OMA:KISACVV
            GeneTree:ENSGT00670000097591 Ensembl:ENSCAFT00000039055
            Uniprot:F1PQJ0
        Length = 530

 Score = 356 (130.4 bits), Expect = 3.7e-30, P = 3.7e-30
 Identities = 79/225 (35%), Positives = 116/225 (51%)

Query:   577 NWNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELEN 636
             +W  +     GL N GN+CY N  LQCL +T PL +Y L   H   C K+  C  C L+ 
Sbjct:    71 SWEDLSQVGAGLQNMGNTCYVNATLQCLTYTEPLASYVLSQKHGTACRKQTSCMLCTLQA 130

Query:   637 LILRAKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNAS 696
              + R         P  +L  L  + +     ++EDAHE+L + +D MQ  C+ E   + S
Sbjct:   131 HMTRVL-----CHPGRVLRPLPLLLAAFHTHKQEDAHEYLMFILDAMQQACLPEDKPSDS 185

Query:   697 GPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTG 756
                +D +TLI   FGGY RS+I+C  C G S   E  +D++++I G   ++ +AL +   
Sbjct:   186 QHAQD-STLIQHIFGGYWRSQIQCLHCQGISSTLEPYLDISLDI-GAAQSVSQALEQLVK 243

Query:   757 TEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFS 801
              E+L+GEN Y C +C     A K LT      +L + LKRF  F+
Sbjct:   244 PEMLEGENAYHCSKCLEKVPASKVLTWHSCAKVLILVLKRFSDFT 288


>UNIPROTKB|Q6R6M4 [details] [associations]
            symbol:USP17L2 "Ubiquitin carboxyl-terminal hydrolase 17"
            species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0006915 "apoptotic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IMP] [GO:0016579 "protein deubiquitination"
            evidence=IDA] [GO:0000075 "cell cycle checkpoint" evidence=IMP]
            [GO:0004843 "ubiquitin-specific protease activity"
            evidence=IMP;IDA] [GO:0007093 "mitotic cell cycle checkpoint"
            evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0070536 "protein K63-linked
            deubiquitination" evidence=IMP;IDA] [GO:0042981 "regulation of
            apoptotic process" evidence=IMP] [GO:0031064 "negative regulation
            of histone deacetylation" evidence=IMP] [GO:0050691 "regulation of
            defense response to virus by host" evidence=IMP] [GO:1900245
            "positive regulation of MDA-5 signaling pathway" evidence=IMP]
            [GO:1900246 "positive regulation of RIG-I signaling pathway"
            evidence=IMP] [GO:0071108 "protein K48-linked deubiquitination"
            evidence=IMP] [GO:0030334 "regulation of cell migration"
            evidence=IMP] [GO:0032321 "positive regulation of Rho GTPase
            activity" evidence=IMP] [GO:1900027 "regulation of ruffle assembly"
            evidence=IMP] [GO:0034261 "negative regulation of Ras GTPase
            activity" evidence=IDA] [GO:0090315 "negative regulation of protein
            targeting to membrane" evidence=IMP] [GO:0010955 "negative
            regulation of protein processing" evidence=IMP] [GO:0071586
            "CAAX-box protein processing" evidence=IMP] [GO:0005789
            "endoplasmic reticulum membrane" evidence=IDA] [GO:0042127
            "regulation of cell proliferation" evidence=IMP] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 Pfam:PF04774 GO:GO:0005634 GO:GO:0006915
            GO:GO:0042981 GO:GO:0005789 GO:GO:0042127 GO:GO:0030334
            GO:GO:0006511 GO:GO:0032321 GO:GO:0071108 GO:GO:0070536
            GO:GO:0004843 GO:GO:0004221 GO:GO:0031575 GO:GO:0010955
            eggNOG:COG5533 GO:GO:0034261 EMBL:AC130366 GO:GO:0031576
            GO:GO:1900245 GO:GO:1900246 GO:GO:0031064 GO:GO:0071586
            InterPro:IPR006861 GO:GO:0050691 GO:GO:0090315 HSSP:P54578
            GO:GO:1900027 HPA:HPA045642 HOGENOM:HOG000144638 HOVERGEN:HBG007129
            OrthoDB:EOG42V8G0 EMBL:AY509884 IPI:IPI00883911 RefSeq:NP_958804.2
            UniGene:Hs.531448 ProteinModelPortal:Q6R6M4 SMR:Q6R6M4
            IntAct:Q6R6M4 STRING:Q6R6M4 DMDM:187663988 PRIDE:Q6R6M4
            DNASU:377630 Ensembl:ENST00000333796 GeneID:377630 KEGG:hsa:377630
            UCSC:uc003wvc.1 CTD:377630 GeneCards:GC08M011994 H-InvDB:HIX0034323
            HGNC:HGNC:34434 MIM:610186 neXtProt:NX_Q6R6M4 PharmGKB:PA165586023
            InParanoid:Q6R6M4 KO:K11845 PhylomeDB:Q6R6M4 GenomeRNAi:377630
            NextBio:100679 Genevestigator:Q6R6M4 Uniprot:Q6R6M4
        Length = 530

 Score = 355 (130.0 bits), Expect = 4.9e-30, P = 4.9e-30
 Identities = 77/211 (36%), Positives = 113/211 (53%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGKS 646
             GL N GN+CY N  LQCL +TPPL  Y L   HS+ C +   C  C ++  I  A     
Sbjct:    81 GLQNMGNTCYENASLQCLTYTPPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALH--- 137

Query:   647 PLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLI 706
               SP  ++   Q++ +    G++EDAHEFL + +D M+  C+   G         +TTLI
Sbjct:   138 --SPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLP--GHKQVDHHSKDTTLI 193

Query:   707 GLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGENKY 766
                FGG  RS+IKC  CHG S+  +  +D+ ++I+    ++++AL +    E L+GEN Y
Sbjct:   194 HQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQA-AQSVKQALEQLVKPEELNGENAY 252

Query:   767 KCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
              C  C     A K LT+  +  +L + LKRF
Sbjct:   253 HCGLCLQRAPASKTLTLHTSAKVLILVLKRF 283


>UNIPROTKB|P0C7I0 [details] [associations]
            symbol:USP17L8 "Inactive ubiquitin carboxyl-terminal
            hydrolase 17-like protein 8" species:9606 "Homo sapiens"
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005783
            "endoplasmic reticulum" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0005634 GO:GO:0006511 GO:GO:0004221
            eggNOG:COG5533 EMBL:AC130365 HPA:HPA045642 HOGENOM:HOG000144638
            HOVERGEN:HBG007129 OrthoDB:EOG42V8G0 IPI:IPI00398228
            RefSeq:NP_001243801.1 UniGene:Hs.741135 ProteinModelPortal:P0C7I0
            SMR:P0C7I0 STRING:P0C7I0 PhosphoSite:P0C7I0 DMDM:187653909
            PRIDE:P0C7I0 GeneID:392188 KEGG:hsa:392188 CTD:392188
            GeneCards:GC08M007831 HGNC:HGNC:37181 neXtProt:NX_P0C7I0
            InParanoid:P0C7I0 GenomeRNAi:392188 NextBio:104978
            Genevestigator:P0C7I0 Uniprot:P0C7I0
        Length = 530

 Score = 350 (128.3 bits), Expect = 2.0e-29, P = 2.0e-29
 Identities = 76/211 (36%), Positives = 112/211 (53%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGKS 646
             GL N GN+CY N  LQCL +TPPL  Y L   HS+ C +   C  C ++  I  A     
Sbjct:    81 GLQNMGNTCYLNASLQCLTYTPPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALH--- 137

Query:   647 PLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLI 706
               SP  ++   Q++ +    G++EDAHEFL + +D M+  C+   G         +TTLI
Sbjct:   138 --SPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLP--GHKQVDHHSKDTTLI 193

Query:   707 GLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGENKY 766
                FGG  RS+IKC  CHG S+  +  +D+ ++I+    ++++AL +    E L+GEN Y
Sbjct:   194 HQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQA-AQSVKQALEQLVKPEELNGENAY 252

Query:   767 KCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
              C  C     A   LT+  +  +L + LKRF
Sbjct:   253 PCGLCLQRAPASNTLTLHTSAKVLILVLKRF 283


>UNIPROTKB|J9JHA0 [details] [associations]
            symbol:J9JHA0 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS50235
            GO:GO:0006511 GO:GO:0004221 OMA:QNLKTTK
            GeneTree:ENSGT00670000097591 EMBL:AAEX03012849
            Ensembl:ENSCAFT00000046526 Uniprot:J9JHA0
        Length = 376

 Score = 329 (120.9 bits), Expect = 6.9e-29, P = 6.9e-29
 Identities = 78/225 (34%), Positives = 115/225 (51%)

Query:   577 NWNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELEN 636
             +W  +     GL N GN+CY N  LQCL +T PL +Y LQ  H   C K+  C  C L+ 
Sbjct:     5 SWEGLSQVGAGLQNMGNTCYVNATLQCLTYTEPLASYMLQK-HGTACRKQTSCMLCTLQA 63

Query:   637 LILRAKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNAS 696
              + R         P  +L  L  + +     ++EDAHE+L + +D MQ  C+ E   + S
Sbjct:    64 HMTRVL-----CHPGRVLLPLPLLLAAFHTHKQEDAHEYLMFILDAMQQACLPEDKPSDS 118

Query:   697 GPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTG 756
                +D +TLI   FGGY RS+I+C  C   S   E  +D+++    DIG   +++R+   
Sbjct:   119 QHAQD-STLIQHIFGGYWRSQIQCLHCQSISSTLEPYLDISL----DIG-AAQSVRQLVK 172

Query:   757 TEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFS 801
              E+L+GEN Y C +      A K LT+     +L + LKRF  F+
Sbjct:   173 PEMLEGENAYHCSKGLEKVPASKVLTLDSCAKVLILVLKRFSDFT 217


>UNIPROTKB|E2R279 [details] [associations]
            symbol:E2R279 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 Pfam:PF04774 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 InterPro:IPR006861 OMA:VICALRQ
            GeneTree:ENSGT00670000097591 EMBL:AAEX03010545
            Ensembl:ENSCAFT00000023252 Uniprot:E2R279
        Length = 526

 Score = 339 (124.4 bits), Expect = 3.7e-28, P = 3.7e-28
 Identities = 75/221 (33%), Positives = 114/221 (51%)

Query:   577 NWNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELEN 636
             +W  +     GL N GN+CY N  LQCL +T PL +Y L   H   C K+  C  C L+ 
Sbjct:    71 SWKSLSQVGAGLQNMGNTCYVNATLQCLTYTEPLASYMLSQQHGTTCRKQTSCMLCTLQA 130

Query:   637 LILRAKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNAS 696
              + R         P  +L  L  + +     ++EDAHE+L + +D MQ  C+ E  ++  
Sbjct:   131 HLTRVL-----CHPGRVLRPLPLLLAAFHRHKQEDAHEYLMFILDAMQQACLPEDKLSDP 185

Query:   697 GPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTG 756
                +D +TLI   FGGY RS+I+C  C G S   E  +D++++I     ++ +AL +   
Sbjct:   186 ESPQD-STLIQQLFGGYWRSQIQCLHCQGISSTLESYLDISLDIAA-AHSVSQALEQLVK 243

Query:   757 TEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
              E+L+GEN Y C +C   EK     T   +P +L + L+RF
Sbjct:   244 PELLEGENAYHCSKC--LEKVPASKT---SPKVLILVLRRF 279


>UNIPROTKB|A6NCW0 [details] [associations]
            symbol:USP17L3 "Ubiquitin carboxyl-terminal hydrolase
            17-like protein 3" species:9606 "Homo sapiens" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0006915 "apoptotic process" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 Pfam:PF04774
            GO:GO:0005634 GO:GO:0006915 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 InterPro:IPR006861 EMBL:AC130365 HPA:HPA045642
            HOGENOM:HOG000144638 HOVERGEN:HBG007129 OrthoDB:EOG42V8G0
            IPI:IPI00736169 RefSeq:NP_001243800.1 UniGene:Hs.741131
            ProteinModelPortal:A6NCW0 SMR:A6NCW0 STRING:A6NCW0 PRIDE:A6NCW0
            GeneID:645836 KEGG:hsa:645836 CTD:645836 GeneCards:GC08M007833
            HGNC:HGNC:37175 neXtProt:NX_A6NCW0 InParanoid:A6NCW0
            PhylomeDB:A6NCW0 GenomeRNAi:645836 NextBio:118020
            Genevestigator:A6NCW0 Uniprot:A6NCW0
        Length = 530

 Score = 339 (124.4 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 75/211 (35%), Positives = 110/211 (52%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGKS 646
             GL N GN+CY N  LQCL +T PL  Y L   HS+ C +   C  C ++  I  A     
Sbjct:    81 GLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALH--- 137

Query:   647 PLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLI 706
               SP  ++   Q++ S    G++ED HEFL + +D M+  C+   G         +TTLI
Sbjct:   138 --SPGHVIQPSQALASGFHRGKQEDVHEFLMFTVDAMKKACLP--GHKQVDHHSKDTTLI 193

Query:   707 GLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGENKY 766
                FGG  RS+IKC  CHG S+  +  +D+ ++I+    ++++AL +    E L+GEN Y
Sbjct:   194 HQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQA-AQSVKQALEQLVKPEELNGENAY 252

Query:   767 KCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
              C  C     A   LT+  +  +L + LKRF
Sbjct:   253 HCGLCLQRAPASNTLTLHTSAKVLILVLKRF 283


>UNIPROTKB|A6NCW7 [details] [associations]
            symbol:USP17L4 "Inactive ubiquitin carboxyl-terminal
            hydrolase 17-like protein 4" species:9606 "Homo sapiens"
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005783
            "endoplasmic reticulum" evidence=IEA] InterPro:IPR001394
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            GO:GO:0005634 GO:GO:0006511 GO:GO:0004221 EMBL:AC130360
            HPA:HPA045642 HOGENOM:HOG000144638 HOVERGEN:HBG007129
            OrthoDB:EOG42V8G0 IPI:IPI00739049 RefSeq:NP_001243803.1
            UniGene:Hs.741134 ProteinModelPortal:A6NCW7 SMR:A6NCW7
            STRING:A6NCW7 PhosphoSite:A6NCW7 PRIDE:A6NCW7 GeneID:645402
            KEGG:hsa:645402 CTD:645402 GeneCards:GC08P007194 HGNC:HGNC:37176
            neXtProt:NX_A6NCW7 InParanoid:A6NCW7 GenomeRNAi:645402
            NextBio:117471 Genevestigator:A6NCW7 Uniprot:A6NCW7
        Length = 530

 Score = 336 (123.3 bits), Expect = 8.8e-28, P = 8.8e-28
 Identities = 74/211 (35%), Positives = 110/211 (52%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGKS 646
             GL N GN+CY N  LQCL +T PL  Y L   HS+ C +   C  C ++  I  A     
Sbjct:    81 GLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALH--- 137

Query:   647 PLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLI 706
               SP  ++   Q++ +    G++ED HEFL + +D M+  C+   G         +TTLI
Sbjct:   138 --SPGHVIQPSQALAAGFHRGKQEDVHEFLMFTVDAMKKACLP--GHKQVDHHSKDTTLI 193

Query:   707 GLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGENKY 766
                FGG  RS+IKC  CHG S+  +  +D+ ++I+    ++++AL +    E L+GEN Y
Sbjct:   194 HQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQA-AQSVKQALEQLVKPEELNGENAY 252

Query:   767 KCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
              C  C     A   LT+  +  +L + LKRF
Sbjct:   253 HCGLCLQRAPASNTLTLHTSAKVLILVLKRF 283


>UNIPROTKB|Q7RTZ2 [details] [associations]
            symbol:USP17L1P "Putative ubiquitin carboxyl-terminal
            hydrolase 17-like protein 1" species:9606 "Homo sapiens"
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0006915 "apoptotic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005783 "endoplasmic
            reticulum" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            Pfam:PF04774 GO:GO:0006915 GO:GO:0005730 GO:GO:0008234
            GO:GO:0006511 GO:GO:0004221 eggNOG:COG5533 EMBL:AF228730
            InterPro:IPR006861 HSSP:P54578 EMBL:BN000116 IPI:IPI00394951
            RefSeq:NP_001243802.1 UniGene:Hs.653091 ProteinModelPortal:Q7RTZ2
            SMR:Q7RTZ2 STRING:Q7RTZ2 MEROPS:C19.078 DMDM:74723224 PaxDb:Q7RTZ2
            PRIDE:Q7RTZ2 GeneID:401447 KEGG:hsa:401447 CTD:401447
            GeneCards:GC08P007190 HGNC:HGNC:37182 HPA:HPA045642
            neXtProt:NX_Q7RTZ2 HOGENOM:HOG000144638 HOVERGEN:HBG007129
            InParanoid:Q7RTZ2 OrthoDB:EOG42V8G0 GenomeRNAi:401447
            Genevestigator:Q7RTZ2 Uniprot:Q7RTZ2
        Length = 530

 Score = 332 (121.9 bits), Expect = 2.6e-27, P = 2.6e-27
 Identities = 74/211 (35%), Positives = 110/211 (52%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGKS 646
             GL N GN+CY N  LQCL +T PL  Y L   HS+ C +   C  C ++  I  A     
Sbjct:    81 GLQNMGNTCYENASLQCLTYTLPLANYMLSREHSQTCQRPKCCMLCTMQAHITWALH--- 137

Query:   647 PLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLI 706
               SP  ++   Q++ +    G++ED HEFL + +D M+  C+           +D TTLI
Sbjct:   138 --SPGHVIQPSQALAAGFHRGKQEDVHEFLMFTVDAMKKACLP-GHKQVDHHCKD-TTLI 193

Query:   707 GLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGENKY 766
                FGG  RS+IKC  CHG S+  +  +D+ ++I+    ++++AL +    E L+GEN Y
Sbjct:   194 HQIFGGCWRSQIKCLHCHGISDTFDPYLDIALDIQA-AQSVKQALEQLVKPEELNGENAY 252

Query:   767 KCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
              C  C     A   LT+  +  +L + LKRF
Sbjct:   253 HCGLCLQRAPASNTLTLHTSAKVLILVLKRF 283


>UNIPROTKB|E7EWZ4 [details] [associations]
            symbol:USP42 "Ubiquitin carboxyl-terminal hydrolase 42"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00973 PROSITE:PS50235
            GO:GO:0006511 GO:GO:0004221 EMBL:AC004895 HGNC:HGNC:20068
            IPI:IPI01011330 ProteinModelPortal:E7EWZ4 SMR:E7EWZ4
            Ensembl:ENST00000465073 ArrayExpress:E7EWZ4 Bgee:E7EWZ4
            Uniprot:E7EWZ4
        Length = 475

 Score = 325 (119.5 bits), Expect = 6.3e-27, P = 6.3e-27
 Identities = 65/175 (37%), Positives = 101/175 (57%)

Query:   628 WCFTCELENLILRAKDGKSP-LSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSV 686
             +C  C ++  I +A       + P+ +++ ++ I      G +EDAHEFL+Y +D MQ  
Sbjct:    86 FCMMCTMQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKA 145

Query:   687 CIEEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGN 746
             C+   G N        TTL+   FGGYLRS++KC  C G S+  +  +D+T+EI+    +
Sbjct:   146 CLN--GSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA-AQS 202

Query:   747 LEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFS 801
             + +AL ++   E LDGEN YKC +CK    A K+ TI  + N+LT++LKRF  F+
Sbjct:   203 VNKALEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFT 257


>RGD|1562061 [details] [associations]
            symbol:Usp17l5 "ubiquitin specific peptidase 17-like 5"
            species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 RGD:1562061 RGD:1565607
            GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00670000097591 EMBL:AC130613 IPI:IPI00359152
            Ensembl:ENSRNOT00000023213 Uniprot:F1M413
        Length = 504

 Score = 315 (115.9 bits), Expect = 1.7e-25, P = 1.7e-25
 Identities = 73/214 (34%), Positives = 107/214 (50%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELE----NLILRAK 642
             GL N GNSCY N VLQCL  TPPL  Y L   HS+ C   + C  C +E      +L + 
Sbjct:    52 GLQNIGNSCYLNAVLQCLTHTPPLADYMLSQEHSQRCCYPEGCNMCAMEAHVTQSLLHSH 111

Query:   643 DGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDE 702
              G       G++   + + S     R+EDAHEFL + ++TM   C+   G   S     +
Sbjct:   112 SG-------GVMKPSEILTSTFHKHRQEDAHEFLMFTLNTMHESCLR--GCKQSETTSKD 162

Query:   703 TTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDG 762
             ++LI   FGG +RS+IKC  C G  +  +  ++L ++I     ++++AL      E L G
Sbjct:   163 SSLIYDIFGGQMRSQIKCHHCQGTLDSYDPFLNLFLDI-CSAQSVKQALEDLVKVEELQG 221

Query:   763 ENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKR 796
             +N Y C RC+    A K   +  A  +L + L R
Sbjct:   222 DNAYYCGRCREKMPASKTTKVQTASKVLLLVLNR 255


>RGD|1565607 [details] [associations]
            symbol:RGD1565607 "similar to mouse deubiquitinating enzyme 6"
            species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 RGD:1562061 RGD:1565607
            GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00670000097591 EMBL:AC130613 IPI:IPI00359152
            Ensembl:ENSRNOT00000023213 Uniprot:F1M413
        Length = 504

 Score = 315 (115.9 bits), Expect = 1.7e-25, P = 1.7e-25
 Identities = 73/214 (34%), Positives = 107/214 (50%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELE----NLILRAK 642
             GL N GNSCY N VLQCL  TPPL  Y L   HS+ C   + C  C +E      +L + 
Sbjct:    52 GLQNIGNSCYLNAVLQCLTHTPPLADYMLSQEHSQRCCYPEGCNMCAMEAHVTQSLLHSH 111

Query:   643 DGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDE 702
              G       G++   + + S     R+EDAHEFL + ++TM   C+   G   S     +
Sbjct:   112 SG-------GVMKPSEILTSTFHKHRQEDAHEFLMFTLNTMHESCLR--GCKQSETTSKD 162

Query:   703 TTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDG 762
             ++LI   FGG +RS+IKC  C G  +  +  ++L ++I     ++++AL      E L G
Sbjct:   163 SSLIYDIFGGQMRSQIKCHHCQGTLDSYDPFLNLFLDI-CSAQSVKQALEDLVKVEELQG 221

Query:   763 ENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKR 796
             +N Y C RC+    A K   +  A  +L + L R
Sbjct:   222 DNAYYCGRCREKMPASKTTKVQTASKVLLLVLNR 255


>UNIPROTKB|F1NVC5 [details] [associations]
            symbol:USP12P1 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00650000093027 EMBL:AADN02013537 IPI:IPI00590579
            Ensembl:ENSGALT00000022631 OMA:NCEAVSS ArrayExpress:F1NVC5
            Uniprot:F1NVC5
        Length = 375

 Score = 297 (109.6 bits), Expect = 2.0e-25, P = 2.0e-25
 Identities = 76/231 (32%), Positives = 120/231 (51%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTC--ELENLILRAKDG 644
             GL+N GN+CY N VLQ L F  P     L   +  +  KK+   TC  +L N I   K  
Sbjct:    46 GLVNFGNTCYCNSVLQALYFCRPFREKVLA--YKVQPRKKESLLTCLSDLFNSIATQKKK 103

Query:   645 KSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEA------GVNASGP 698
                + P   +SRL+       N  ++DAHEFL Y ++T+  +  EE       G   +G 
Sbjct:   104 VGVIPPKKFISRLRKENELFDNYMQQDAHEFLNYLLNTIADLLQEEKKQEKQNGKLQNGS 163

Query:   699 LE----DETTLIGL--TFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALR 752
             +E    D+T L  +   F G L ++ +C  C   S + E  +DL+V++E +  ++   LR
Sbjct:   164 IESEEGDKTDLTWVHEIFQGTLTNETRCLNCEAVSSKDEDFLDLSVDVEQNT-SITHCLR 222

Query:   753 RYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFSPL 803
              ++ TE L  E KY C++C+S ++A+K++ + + P IL + LKRF+    L
Sbjct:   223 GFSNTETLCSEYKYYCEQCRSKQEAQKRMRVKKLPMILALHLKRFKYMDQL 273


>RGD|1588758 [details] [associations]
            symbol:LOC689730 "similar to ubiquitin specific peptidase 17
            (homolog)" species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 RGD:1588758 GO:GO:0008234
            GO:GO:0006511 GO:GO:0004221 GeneTree:ENSGT00670000097591
            IPI:IPI00557791 Ensembl:ENSRNOT00000042131 Uniprot:F1LVL3
        Length = 523

 Score = 309 (113.8 bits), Expect = 1.1e-24, P = 1.1e-24
 Identities = 72/221 (32%), Positives = 109/221 (49%)

Query:   580 KVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELE---- 635
             +++    GL N GNSCY N VLQCL  TPPL  Y L   HS+ C   + C  C +E    
Sbjct:    45 RIQSPGSGLQNIGNSCYLNAVLQCLTHTPPLADYMLSQEHSQRCCYPEGCKMCAMEAHVT 104

Query:   636 NLILRAKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNA 695
               +L +  G       G++   + + S     R+EDAHEFL + ++ M   C+   G   
Sbjct:   105 QSLLHSHSG-------GVMKPSEILTSTFHKHRQEDAHEFLMFTLNAMHESCLR--GCKQ 155

Query:   696 SGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYT 755
             S     +++LI   FGG +RS+IKC  C G  +  +  ++L ++I     ++++AL    
Sbjct:   156 SETSSKDSSLIYDIFGGQMRSQIKCHHCQGTLDSYDPFLNLFLDI-CSAQSVKQALEDLV 214

Query:   756 GTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKR 796
               E L G+N Y C RC+    A K   +  A  +L + L R
Sbjct:   215 KLEELQGDNAYYCGRCREKMPASKTTKVQTASKVLLLVLNR 255


>UNIPROTKB|C9JPC9 [details] [associations]
            symbol:USP42 "Ubiquitin carboxyl-terminal hydrolase 42"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0016579 "protein
            deubiquitination" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00973 PROSITE:PS50235
            GO:GO:0006511 GO:GO:0016579 GO:GO:0004221 EMBL:AC004895
            HGNC:HGNC:20068 IPI:IPI00976770 ProteinModelPortal:C9JPC9
            SMR:C9JPC9 STRING:C9JPC9 Ensembl:ENST00000426246
            HOGENOM:HOG000203246 ArrayExpress:C9JPC9 Bgee:C9JPC9 Uniprot:C9JPC9
        Length = 1044

 Score = 316 (116.3 bits), Expect = 1.1e-24, P = 1.1e-24
 Identities = 64/171 (37%), Positives = 99/171 (57%)

Query:   632 CELENLILRAKDGKSP-LSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEE 690
             C ++  I +A       + P+ +++ ++ I      G +EDAHEFL+Y +D MQ  C+  
Sbjct:     3 CTMQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACLN- 61

Query:   691 AGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEA 750
              G N        TTL+   FGGYLRS++KC  C G S+  +  +D+T+EI+    ++ +A
Sbjct:    62 -GSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKA-AQSVNKA 119

Query:   751 LRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFS 801
             L ++   E LDGEN YKC +CK    A K+ TI  + N+LT++LKRF  F+
Sbjct:   120 LEQFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFT 170


>UNIPROTKB|B4PIW8 [details] [associations]
            symbol:Usp36 "Ubiquitin carboxyl-terminal hydrolase 36"
            species:7245 "Drosophila yakuba" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0005730 "nucleolus"
            evidence=ISS] [GO:0016579 "protein deubiquitination" evidence=ISS]
            [GO:0030718 "germ-line stem cell maintenance" evidence=ISS]
            [GO:0035019 "somatic stem cell maintenance" evidence=ISS]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005730 GO:GO:0008234
            GO:GO:0006511 GO:GO:0035019 GO:GO:0030718 GO:GO:0016579
            GO:GO:0004221 eggNOG:COG5533 EMBL:CM000159 KO:K11855
            OrthoDB:EOG4WM38P RefSeq:XP_002093826.1 EnsemblMetazoa:FBtr0268026
            GeneID:6533100 KEGG:dya:Dyak_GE21508 FlyBase:FBgn0238765
            Uniprot:B4PIW8
        Length = 1082

 Score = 314 (115.6 bits), Expect = 1.9e-24, P = 1.9e-24
 Identities = 73/218 (33%), Positives = 112/218 (51%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFL-QGLHSKECAKKD---WCFTCELENLILRAK 642
             G+IN GN+CY N  LQ L   P L  + + +  H + C   +    C  C +   +L  +
Sbjct:   174 GMINVGNTCYLNSTLQALLHIPALANWLVSEQAHLENCNVAESGGGCIVCAMAKTLLATQ 233

Query:   643 DGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEE-AGVNASGPLED 701
               +S + P  I S+L+ I   +  GR+EDAHEFLR+ ++ M+   +           L  
Sbjct:   234 SNQSAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFRNYKELDQLVK 293

Query:   702 ETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILD 761
             ETT +G  FGGYLRS+++C  C+  S   +   DL ++I     +LE+A   +   E L+
Sbjct:   294 ETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIR-KADSLEDAFEGHFSRERLE 352

Query:   762 GENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQV 799
              +  YKC+ CK    A K+ ++  AP  L I LKRF +
Sbjct:   353 -DMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSM 389


>UNIPROTKB|B4QIS3 [details] [associations]
            symbol:Usp36 "Ubiquitin carboxyl-terminal hydrolase 36"
            species:7240 "Drosophila simulans" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0005730 "nucleolus"
            evidence=ISS] [GO:0016579 "protein deubiquitination" evidence=ISS]
            [GO:0030718 "germ-line stem cell maintenance" evidence=ISS]
            [GO:0035019 "somatic stem cell maintenance" evidence=ISS]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005730 GO:GO:0008234
            GO:GO:0006511 GO:GO:0035019 GO:GO:0030718 GO:GO:0016579
            GO:GO:0004221 EMBL:CM000363 KO:K11855 OrthoDB:EOG4WM38P
            RefSeq:XP_002083763.1 EnsemblMetazoa:FBtr0213809 GeneID:6736916
            KEGG:dsi:Dsim_GD13899 FlyBase:FBgn0185595 Uniprot:B4QIS3
        Length = 988

 Score = 313 (115.2 bits), Expect = 2.1e-24, P = 2.1e-24
 Identities = 73/218 (33%), Positives = 112/218 (51%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFL-QGLHSKECAKKD---WCFTCELENLILRAK 642
             G+IN GN+CY N  LQ L   P L  + + +  H  +C   +    C  C +   +L  +
Sbjct:    79 GMINVGNTCYLNSTLQALLHIPALANWLVSEQAHLADCNVAEPGSGCIICAMAKTLLATQ 138

Query:   643 DGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEE-AGVNASGPLED 701
               +S + P  I S+L+ I   +  GR+EDAHEFLR+ ++ M+   +           L  
Sbjct:   139 SNQSAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFRNYKELDQLVK 198

Query:   702 ETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILD 761
             ETT +G  FGGYLRS+++C  C+  S   +   DL ++I     +LE+A   +   E L+
Sbjct:   199 ETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIR-KADSLEDAFEGHFSRERLE 257

Query:   762 GENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQV 799
              +  YKC+ CK    A K+ ++  AP  L I LKRF +
Sbjct:   258 -DMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSM 294


>FB|FBgn0260936 [details] [associations]
            symbol:scny "scrawny" species:7227 "Drosophila melanogaster"
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0016579 "protein deubiquitination" evidence=NAS]
            [GO:0040007 "growth" evidence=IMP] [GO:0007591 "molting cycle,
            chitin-based cuticle" evidence=IMP] [GO:0016578 "histone
            deubiquitination" evidence=IMP;IDA] [GO:0042981 "regulation of
            apoptotic process" evidence=IMP] [GO:0045824 "negative regulation
            of innate immune response" evidence=IMP] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 EMBL:AE014296 GO:GO:0005730 GO:GO:0042981
            GO:GO:0008234 GO:GO:0006511 GO:GO:0035019 GO:GO:0030718
            GO:GO:0016578 GO:GO:0004221 GO:GO:0045824 eggNOG:COG5533
            HSSP:P40818 KO:K11855 OrthoDB:EOG4WM38P OMA:PYESASE EMBL:AY051916
            EMBL:BT004507 EMBL:BT010120 EMBL:BT046169 RefSeq:NP_647986.2
            RefSeq:NP_729091.1 RefSeq:NP_729092.1 RefSeq:NP_729093.1
            RefSeq:NP_729094.1 RefSeq:NP_729095.1 UniGene:Dm.6825
            ProteinModelPortal:Q9VRP5 SMR:Q9VRP5 STRING:Q9VRP5 MEROPS:C19.097
            PaxDb:Q9VRP5 GeneID:38648 KEGG:dme:Dmel_CG5505 CTD:38648
            FlyBase:FBgn0260936 InParanoid:Q86NM9 PhylomeDB:Q9VRP5
            GenomeRNAi:38648 NextBio:809699 Bgee:Q9VRP5 Uniprot:Q9VRP5
        Length = 1085

 Score = 313 (115.2 bits), Expect = 2.5e-24, P = 2.5e-24
 Identities = 73/218 (33%), Positives = 112/218 (51%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFL-QGLHSKECAKKD---WCFTCELENLILRAK 642
             G+IN GN+CY N  LQ L   P L  + + +  H  +C   +    C  C +   +L  +
Sbjct:   173 GMINVGNTCYLNSTLQALLHIPALANWLVSEQAHLADCNVAEPGSGCIICAMTKTLLATQ 232

Query:   643 DGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEE-AGVNASGPLED 701
               +S + P  I S+L+ I   +  GR+EDAHEFLR+ ++ M+   +           L  
Sbjct:   233 SNQSAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFRNYKELDQLVK 292

Query:   702 ETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILD 761
             ETT +G  FGGYLRS+++C  C+  S   +   DL ++I     +LE+A   +   E L+
Sbjct:   293 ETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIR-KADSLEDAFEGHFSRERLE 351

Query:   762 GENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQV 799
              +  YKC+ CK    A K+ ++  AP  L I LKRF +
Sbjct:   352 -DMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSM 388


>UNIPROTKB|B3NC86 [details] [associations]
            symbol:Usp36 "Ubiquitin carboxyl-terminal hydrolase 36"
            species:7220 "Drosophila erecta" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0005730 "nucleolus"
            evidence=ISS] [GO:0016579 "protein deubiquitination" evidence=ISS]
            [GO:0030718 "germ-line stem cell maintenance" evidence=ISS]
            [GO:0035019 "somatic stem cell maintenance" evidence=ISS]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005730 GO:GO:0008234
            GO:GO:0006511 GO:GO:0035019 GO:GO:0030718 GO:GO:0016579
            GO:GO:0004221 EMBL:CH954178 KO:K11855 OrthoDB:EOG4WM38P
            RefSeq:XP_001972018.1 EnsemblMetazoa:FBtr0135339 GeneID:6544695
            KEGG:der:Dere_GG15285 FlyBase:FBgn0107537 Uniprot:B3NC86
        Length = 1085

 Score = 313 (115.2 bits), Expect = 2.5e-24, P = 2.5e-24
 Identities = 73/218 (33%), Positives = 111/218 (50%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFL-QGLHSKECAKKD---WCFTCELENLILRAK 642
             G+IN GN+CY N  LQ L   P L  + + +  H + C   +    C  C +   +L  +
Sbjct:   174 GMINVGNTCYLNSTLQALLHIPALANWLVSEQAHLENCNVAESGGGCIVCAMAKTLLATQ 233

Query:   643 DGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEE-AGVNASGPLED 701
               +S + P  I S+L+ I   +  GR+EDAHEFLR+ ++ M+   +           L  
Sbjct:   234 SNQSAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFRNYKELDQLVK 293

Query:   702 ETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILD 761
             ETT +G  FGGYLRS+++C  C+  S   +   DL ++I      LE+A   +   E L+
Sbjct:   294 ETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIR-KADTLEDAFEGHFSRERLE 352

Query:   762 GENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQV 799
              +  YKC+ CK    A K+ ++  AP  L I LKRF +
Sbjct:   353 -DMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSM 389


>UNIPROTKB|P0C7H9 [details] [associations]
            symbol:USP17L7 "Inactive ubiquitin carboxyl-terminal
            hydrolase 17-like protein 7" species:9606 "Homo sapiens"
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005783
            "endoplasmic reticulum" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 Pfam:PF04774 GO:GO:0005634 GO:GO:0006511
            GO:GO:0004221 eggNOG:COG5533 EMBL:AC130366 InterPro:IPR006861
            HPA:HPA045642 HOGENOM:HOG000144638 HOVERGEN:HBG007129
            OrthoDB:EOG42V8G0 IPI:IPI00398229 RefSeq:NP_001243798.1
            UniGene:Hs.741132 ProteinModelPortal:P0C7H9 SMR:P0C7H9
            IntAct:P0C7H9 STRING:P0C7H9 DMDM:187653908 PRIDE:P0C7H9
            GeneID:392197 KEGG:hsa:392197 CTD:392197 GeneCards:GC08M011990
            HGNC:HGNC:37180 neXtProt:NX_P0C7H9 InParanoid:P0C7H9
            GenomeRNAi:392197 NextBio:104989 Genevestigator:P0C7H9
            Uniprot:P0C7H9
        Length = 530

 Score = 304 (112.1 bits), Expect = 4.1e-24, P = 4.1e-24
 Identities = 72/211 (34%), Positives = 107/211 (50%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGKS 646
             GL   GN+ Y NV LQCL +T PL+ Y L    S+ C     C  C ++  I  A     
Sbjct:    81 GLQKIGNTFYVNVSLQCLTYTLPLSNYMLSREDSQTCHLHKCCMFCTMQAHITWALH--- 137

Query:   647 PLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLI 706
               SP  ++   Q + +    G +EDAHEFL + +D M+  C+   G         +TTLI
Sbjct:   138 --SPGHVIQPSQVLAAGFHRGEQEDAHEFLMFTVDAMKKACLP--GHKQLDHHSKDTTLI 193

Query:   707 GLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGENKY 766
                FG Y RS+IK   CHG S+  +  +D+ ++I+    ++++AL +    + L+GEN Y
Sbjct:   194 HQIFGAYWRSQIKYLHCHGVSDTFDPYLDIALDIQA-AQSVKQALEQLVKPKELNGENAY 252

Query:   767 KCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
              C  C     A K LT+  +  +L + LKRF
Sbjct:   253 HCGLCLQKAPASKTLTLPTSAKVLILVLKRF 283


>UNIPROTKB|F1MZM8 [details] [associations]
            symbol:USP46 "Ubiquitin carboxyl-terminal hydrolase"
            species:9913 "Bos taurus" [GO:0032228 "regulation of synaptic
            transmission, GABAergic" evidence=IEA] [GO:0016579 "protein
            deubiquitination" evidence=IEA] [GO:0007610 "behavior"
            evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            GO:GO:0007610 GO:GO:0032228 GO:GO:0006511 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 GeneTree:ENSGT00650000093027
            OMA:TEPTWVH EMBL:DAAA02017666 EMBL:DAAA02017667 IPI:IPI00731835
            UniGene:Bt.25057 Ensembl:ENSBTAT00000004472 NextBio:20872216
            Uniprot:F1MZM8
        Length = 382

 Score = 284 (105.0 bits), Expect = 5.1e-24, P = 5.1e-24
 Identities = 75/232 (32%), Positives = 117/232 (50%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTC--ELENLILRAKDG 644
             GL+N GN+CY N VLQ L F  P     L   +  +  KK+   TC  +L + I   K  
Sbjct:    52 GLVNFGNTCYCNSVLQALYFCRPFRENVLA--YKAQQKKKENLLTCLADLFHSIATQKKK 109

Query:   645 KSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEA------GV----N 694
                + P   +SRL+       N  ++DAHEFL Y ++T+  +  EE       G     N
Sbjct:   110 VGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLKNGN 169

Query:   695 ASGPLED---ETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEAL 751
              + P E+   E T +   F G L ++ +C  C   S + E  +DL+V++E +  ++   L
Sbjct:   170 MNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNT-SITHCL 228

Query:   752 RRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFSPL 803
             R ++ TE L  E KY C+ C S ++A+K++ + + P IL + LKRF+    L
Sbjct:   229 RDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQL 280


>UNIPROTKB|P62068 [details] [associations]
            symbol:USP46 "Ubiquitin carboxyl-terminal hydrolase 46"
            species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0016579 "protein
            deubiquitination" evidence=IDA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IDA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IDA] [GO:0032228
            "regulation of synaptic transmission, GABAergic" evidence=ISS]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0007610 "behavior"
            evidence=ISS] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0007610
            GO:GO:0032228 EMBL:CH471057 GO:GO:0006511 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 eggNOG:COG5077 KO:K11842
            OrthoDB:EOG42Z4Q8 HPA:HPA007288 HOVERGEN:HBG054038 OMA:TEPTWVH
            EMBL:GU455414 EMBL:AK022614 EMBL:AK024318 EMBL:AK296493
            EMBL:AK299883 EMBL:AK302438 EMBL:BC037574 IPI:IPI00303458
            IPI:IPI00909695 IPI:IPI00935919 IPI:IPI00936274
            RefSeq:NP_001127695.1 RefSeq:NP_073743.2 UniGene:Hs.7966
            ProteinModelPortal:P62068 SMR:P62068 IntAct:P62068 STRING:P62068
            MEROPS:C19.052 DMDM:49065850 PRIDE:P62068 DNASU:64854
            Ensembl:ENST00000441222 Ensembl:ENST00000508499 GeneID:64854
            KEGG:hsa:64854 UCSC:uc003gzm.4 UCSC:uc003gzn.3 UCSC:uc011bzr.2
            UCSC:uc011bzs.2 CTD:64854 GeneCards:GC04M053376 HGNC:HGNC:20075
            MIM:612849 neXtProt:NX_P62068 PharmGKB:PA134922048
            InParanoid:P62068 GenomeRNAi:64854 NextBio:66987
            ArrayExpress:P62068 Bgee:P62068 CleanEx:HS_USP46
            Genevestigator:P62068 GermOnline:ENSG00000109189 Uniprot:P62068
        Length = 366

 Score = 284 (105.0 bits), Expect = 5.1e-24, P = 5.1e-24
 Identities = 75/232 (32%), Positives = 117/232 (50%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTC--ELENLILRAKDG 644
             GL+N GN+CY N VLQ L F  P     L   +  +  KK+   TC  +L + I   K  
Sbjct:    36 GLVNFGNTCYCNSVLQALYFCRPFRENVLA--YKAQQKKKENLLTCLADLFHSIATQKKK 93

Query:   645 KSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEA------GV----N 694
                + P   +SRL+       N  ++DAHEFL Y ++T+  +  EE       G     N
Sbjct:    94 VGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLKNGN 153

Query:   695 ASGPLED---ETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEAL 751
              + P E+   E T +   F G L ++ +C  C   S + E  +DL+V++E +  ++   L
Sbjct:   154 MNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNT-SITHCL 212

Query:   752 RRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFSPL 803
             R ++ TE L  E KY C+ C S ++A+K++ + + P IL + LKRF+    L
Sbjct:   213 RDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQL 264


>UNIPROTKB|I3LLE9 [details] [associations]
            symbol:USP46 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0032228 "regulation of synaptic transmission,
            GABAergic" evidence=IEA] [GO:0016579 "protein deubiquitination"
            evidence=IEA] [GO:0007610 "behavior" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0007610 GO:GO:0032228
            GO:GO:0006511 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            GeneTree:ENSGT00650000093027 OMA:TEPTWVH EMBL:CU469206
            EMBL:FP325228 ProteinModelPortal:I3LLE9 Ensembl:ENSSSCT00000030149
            Uniprot:I3LLE9
        Length = 354

 Score = 284 (105.0 bits), Expect = 5.1e-24, P = 5.1e-24
 Identities = 75/232 (32%), Positives = 117/232 (50%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTC--ELENLILRAKDG 644
             GL+N GN+CY N VLQ L F  P     L   +  +  KK+   TC  +L + I   K  
Sbjct:    24 GLVNFGNTCYCNSVLQALYFCRPFRENVLA--YKAQQKKKENLLTCLADLFHSIATQKKK 81

Query:   645 KSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEA------GV----N 694
                + P   +SRL+       N  ++DAHEFL Y ++T+  +  EE       G     N
Sbjct:    82 VGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLKNGN 141

Query:   695 ASGPLED---ETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEAL 751
              + P E+   E T +   F G L ++ +C  C   S + E  +DL+V++E +  ++   L
Sbjct:   142 MNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNT-SITHCL 200

Query:   752 RRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFSPL 803
             R ++ TE L  E KY C+ C S ++A+K++ + + P IL + LKRF+    L
Sbjct:   201 RDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQL 252


>UNIPROTKB|Q5RBQ4 [details] [associations]
            symbol:USP46 "Ubiquitin carboxyl-terminal hydrolase 46"
            species:9601 "Pongo abelii" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=ISS] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=ISS] [GO:0007610 "behavior" evidence=ISS]
            [GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0032228
            "regulation of synaptic transmission, GABAergic" evidence=ISS]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0007610 GO:GO:0032228
            GO:GO:0006511 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 HSSP:Q93009
            KO:K11842 HOGENOM:HOG000231498 HOVERGEN:HBG054038 CTD:64854
            EMBL:CR858584 EMBL:CR858606 RefSeq:NP_001127337.1
            RefSeq:NP_001128936.1 UniGene:Pab.19202 UniGene:Pab.19798
            ProteinModelPortal:Q5RBQ4 SMR:Q5RBQ4 PRIDE:Q5RBQ4 GeneID:100174399
            GeneID:100189895 KEGG:pon:100174399 KEGG:pon:100189895
            InParanoid:Q5RBN2 Uniprot:Q5RBQ4
        Length = 366

 Score = 284 (105.0 bits), Expect = 5.1e-24, P = 5.1e-24
 Identities = 75/232 (32%), Positives = 117/232 (50%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTC--ELENLILRAKDG 644
             GL+N GN+CY N VLQ L F  P     L   +  +  KK+   TC  +L + I   K  
Sbjct:    36 GLVNFGNTCYCNSVLQALYFCRPFRENVLA--YKAQQKKKENLLTCLADLFHSIATQKKK 93

Query:   645 KSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEA------GV----N 694
                + P   +SRL+       N  ++DAHEFL Y ++T+  +  EE       G     N
Sbjct:    94 VGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLKNGN 153

Query:   695 ASGPLED---ETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEAL 751
              + P E+   E T +   F G L ++ +C  C   S + E  +DL+V++E +  ++   L
Sbjct:   154 MNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNT-SITHCL 212

Query:   752 RRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFSPL 803
             R ++ TE L  E KY C+ C S ++A+K++ + + P IL + LKRF+    L
Sbjct:   213 RDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQL 264


>MGI|MGI:1916977 [details] [associations]
            symbol:Usp46 "ubiquitin specific peptidase 46" species:10090
            "Mus musculus" [GO:0001662 "behavioral fear response" evidence=IMP]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=ISO]
            [GO:0004843 "ubiquitin-specific protease activity" evidence=ISO]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0006508
            "proteolysis" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0007610 "behavior"
            evidence=IMP] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=ISO] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0032228 "regulation of
            synaptic transmission, GABAergic" evidence=IMP] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 MGI:MGI:1916977 GO:GO:0032228 GO:GO:0006511
            GO:GO:0001662 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            eggNOG:COG5077 KO:K11842 GeneTree:ENSGT00650000093027
            HOGENOM:HOG000231498 OrthoDB:EOG42Z4Q8 HOVERGEN:HBG054038
            OMA:TEPTWVH MEROPS:C19.052 CTD:64854 EMBL:AK145298 EMBL:BC039916
            IPI:IPI00228384 RefSeq:NP_808229.1 UniGene:Mm.48795
            ProteinModelPortal:P62069 SMR:P62069 STRING:P62069 PaxDb:P62069
            PRIDE:P62069 Ensembl:ENSMUST00000068058 GeneID:69727 KEGG:mmu:69727
            InParanoid:Q3ULU5 NextBio:330198 Bgee:P62069 CleanEx:MM_USP46
            Genevestigator:P62069 GermOnline:ENSMUSG00000054814 Uniprot:P62069
        Length = 366

 Score = 284 (105.0 bits), Expect = 5.1e-24, P = 5.1e-24
 Identities = 75/232 (32%), Positives = 117/232 (50%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTC--ELENLILRAKDG 644
             GL+N GN+CY N VLQ L F  P     L   +  +  KK+   TC  +L + I   K  
Sbjct:    36 GLVNFGNTCYCNSVLQALYFCRPFRENVLA--YKAQQKKKENLLTCLADLFHSIATQKKK 93

Query:   645 KSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEA------GV----N 694
                + P   +SRL+       N  ++DAHEFL Y ++T+  +  EE       G     N
Sbjct:    94 VGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLKNGN 153

Query:   695 ASGPLED---ETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEAL 751
              + P E+   E T +   F G L ++ +C  C   S + E  +DL+V++E +  ++   L
Sbjct:   154 MNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNT-SITHCL 212

Query:   752 RRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFSPL 803
             R ++ TE L  E KY C+ C S ++A+K++ + + P IL + LKRF+    L
Sbjct:   213 RDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQL 264


>RGD|1564808 [details] [associations]
            symbol:Usp46 "ubiquitin specific peptidase 46" species:10116
            "Rattus norvegicus" [GO:0001662 "behavioral fear response"
            evidence=ISO] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=ISO] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISO] [GO:0007610 "behavior" evidence=ISO] [GO:0016579
            "protein deubiquitination" evidence=ISO] [GO:0032228 "regulation of
            synaptic transmission, GABAergic" evidence=ISO] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 RGD:1564808 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 KO:K11842 CTD:64854 EMBL:GU455413
            RefSeq:NP_001178525.1 UniGene:Rn.12107 GeneID:289584
            KEGG:rno:289584 Uniprot:G8ACC6
        Length = 366

 Score = 284 (105.0 bits), Expect = 5.1e-24, P = 5.1e-24
 Identities = 75/232 (32%), Positives = 117/232 (50%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTC--ELENLILRAKDG 644
             GL+N GN+CY N VLQ L F  P     L   +  +  KK+   TC  +L + I   K  
Sbjct:    36 GLVNFGNTCYCNSVLQALYFCRPFRENVLA--YKAQQKKKENLLTCLADLFHSIATQKKK 93

Query:   645 KSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEA------GV----N 694
                + P   +SRL+       N  ++DAHEFL Y ++T+  +  EE       G     N
Sbjct:    94 VGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLKNGN 153

Query:   695 ASGPLED---ETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEAL 751
              + P E+   E T +   F G L ++ +C  C   S + E  +DL+V++E +  ++   L
Sbjct:   154 MNEPAENSKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNT-SITHCL 212

Query:   752 RRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFSPL 803
             R ++ TE L  E KY C+ C S ++A+K++ + + P IL + LKRF+    L
Sbjct:   213 RDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQL 264


>UNIPROTKB|F1M625 [details] [associations]
            symbol:Usp46 "Ubiquitin carboxyl-terminal hydrolase"
            species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 RGD:1564808 GO:GO:0007610
            GO:GO:0032228 GO:GO:0006511 GO:GO:0004843 GO:GO:0016579
            GO:GO:0004221 GeneTree:ENSGT00650000093027 IPI:IPI00361813
            Ensembl:ENSRNOT00000002879 Uniprot:F1M625
        Length = 365

 Score = 284 (105.0 bits), Expect = 5.1e-24, P = 5.1e-24
 Identities = 75/232 (32%), Positives = 117/232 (50%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTC--ELENLILRAKDG 644
             GL+N GN+CY N VLQ L F  P     L   +  +  KK+   TC  +L + I   K  
Sbjct:    35 GLVNFGNTCYCNSVLQALYFCRPFRENVLA--YKAQQKKKENLLTCLADLFHSIATQKKK 92

Query:   645 KSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEA------GV----N 694
                + P   +SRL+       N  ++DAHEFL Y ++T+  +  EE       G     N
Sbjct:    93 VGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLKNGN 152

Query:   695 ASGPLED---ETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEAL 751
              + P E+   E T +   F G L ++ +C  C   S + E  +DL+V++E +  ++   L
Sbjct:   153 MNEPAENSKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNT-SITHCL 211

Query:   752 RRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFSPL 803
             R ++ TE L  E KY C+ C S ++A+K++ + + P IL + LKRF+    L
Sbjct:   212 RDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQL 263


>ZFIN|ZDB-GENE-060228-3 [details] [associations]
            symbol:usp12a "ubiquitin specific peptidase 12a"
            species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA;ISS] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISS] [GO:0004197
            "cysteine-type endopeptidase activity" evidence=ISS] [GO:0016579
            "protein deubiquitination" evidence=ISS] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 ZFIN:ZDB-GENE-060228-3 GO:GO:0006511 GO:GO:0004197
            GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 eggNOG:COG5077 KO:K11842
            GeneTree:ENSGT00650000093027 HOGENOM:HOG000231498 OMA:SKFASFC
            OrthoDB:EOG42Z4Q8 EMBL:BC115286 IPI:IPI00508425
            RefSeq:NP_001077025.1 UniGene:Dr.5972 Ensembl:ENSDART00000112670
            GeneID:565736 KEGG:dre:565736 CTD:565736 NextBio:20886545
            Bgee:A4FUN7 Uniprot:A4FUN7
        Length = 371

 Score = 282 (104.3 bits), Expect = 8.4e-24, P = 8.4e-24
 Identities = 73/233 (31%), Positives = 118/233 (50%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTC--ELENLILRAKDG 644
             GL+N GN+CY N VLQ L F  P     L   +  +  +K+   TC  +L + I   K  
Sbjct:    40 GLVNFGNTCYCNSVLQALYFCRPFREKILA--YRSQPRRKENLLTCLADLFHSIANQKRK 97

Query:   645 KSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEA------GVNASGP 698
                + P   ++RL+       N  ++DAHEFL Y ++T+  +  EE       G  A+G 
Sbjct:    98 VGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADLLQEERKQDKQNGKLANGT 157

Query:   699 LEDE--------TTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEA 750
             L+ +        TT +   F G L ++ +C  C   S + E  +DL+V++E +  ++   
Sbjct:   158 LDSQNNNSTPPSTTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNT-SITHC 216

Query:   751 LRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFSPL 803
             LR ++ TE L  E KY C+ C+S ++A K++ + + P IL + LKRF+    L
Sbjct:   217 LRGFSNTETLCSEYKYYCEECRSKQEAHKRMRVKKLPMILALHLKRFKYMEQL 269


>UNIPROTKB|E1C8J6 [details] [associations]
            symbol:USP46 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA] [GO:0007610
            "behavior" evidence=IEA] [GO:0016579 "protein deubiquitination"
            evidence=IEA] [GO:0032228 "regulation of synaptic transmission,
            GABAergic" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            GO:GO:0007610 GO:GO:0032228 GO:GO:0006511 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 EMBL:AADN02031293 KO:K11842
            GeneTree:ENSGT00650000093027 OMA:TEPTWVH CTD:64854
            EMBL:AADN02031294 IPI:IPI00681234 RefSeq:XP_420711.1
            UniGene:Gga.10414 Ensembl:ENSGALT00000032088 GeneID:422758
            KEGG:gga:422758 NextBio:20825346 Uniprot:E1C8J6
        Length = 366

 Score = 281 (104.0 bits), Expect = 1.1e-23, P = 1.1e-23
 Identities = 73/232 (31%), Positives = 116/232 (50%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTC--ELENLILRAKDG 644
             GL+N GN+CY N VLQ L F  P     L   +  +  KK+   TC  +L + I   K  
Sbjct:    36 GLVNFGNTCYCNSVLQALYFCRPFRENVLS--YKAQQKKKENLLTCLADLFHSIATQKKK 93

Query:   645 KSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEA------GVNASGP 698
                + P   +SRL+       N  ++DAHEFL Y ++T+  +  EE       G   +G 
Sbjct:    94 VGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLKNGN 153

Query:   699 LED-------ETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEAL 751
             + +       E T +   F G L ++ +C  C   S + E  +DL+V++E +  ++   L
Sbjct:   154 MNEAEENNKQELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNT-SITHCL 212

Query:   752 RRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFSPL 803
             R ++ TE L  E KY C+ C S ++A+K++ + + P IL + LKRF+    L
Sbjct:   213 RDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQL 264


>UNIPROTKB|A5D9H7 [details] [associations]
            symbol:USP12 "Ubiquitin carboxyl-terminal hydrolase 12"
            species:9913 "Bos taurus" [GO:0004843 "ubiquitin-specific protease
            activity" evidence=ISS] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=ISS] [GO:0004197 "cysteine-type endopeptidase
            activity" evidence=ISS] [GO:0016579 "protein deubiquitination"
            evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            GO:GO:0006511 GO:GO:0004197 GO:GO:0004843 GO:GO:0016579
            GO:GO:0004221 eggNOG:COG5077 KO:K11842 EMBL:BT030596
            IPI:IPI00852466 RefSeq:NP_001091528.1 UniGene:Bt.24513
            Ensembl:ENSBTAT00000022828 GeneID:525655 KEGG:bta:525655 CTD:219333
            GeneTree:ENSGT00650000093027 HOGENOM:HOG000231498 InParanoid:A5D9H7
            OMA:SKFASFC OrthoDB:EOG42Z4Q8 NextBio:20874210 ArrayExpress:A5D9H7
            Uniprot:A5D9H7
        Length = 369

 Score = 281 (104.0 bits), Expect = 1.1e-23, P = 1.1e-23
 Identities = 72/231 (31%), Positives = 116/231 (50%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTC--ELENLILRAKDG 644
             GL+N GN+CY N VLQ L F  P     L   +  +  KK+   TC  +L + I   K  
Sbjct:    40 GLVNFGNTCYCNSVLQALYFCRPFREKVLA--YKSQPRKKESLLTCLADLFHSIATQKKK 97

Query:   645 KSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEA------GVNASGP 698
                + P   ++RL+       N  ++DAHEFL Y ++T+  +  EE       G   +G 
Sbjct:    98 VGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRLPNGN 157

Query:   699 LEDET------TLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALR 752
             ++ E       T +   F G L ++ +C  C   S + E  +DL+V++E +  ++   LR
Sbjct:   158 IDSENNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNT-SITHCLR 216

Query:   753 RYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFSPL 803
              ++ TE L  E KY C+ C+S ++A K++ + + P IL + LKRF+    L
Sbjct:   217 GFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQL 267


>UNIPROTKB|F1P2L3 [details] [associations]
            symbol:USP12 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004197 "cysteine-type
            endopeptidase activity" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA] [GO:0016579
            "protein deubiquitination" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0006511 GO:GO:0004197 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 GeneTree:ENSGT00650000093027
            OMA:SKFASFC EMBL:AADN02005175 IPI:IPI00593873
            Ensembl:ENSGALT00000027624 Uniprot:F1P2L3
        Length = 375

 Score = 280 (103.6 bits), Expect = 1.4e-23, P = 1.4e-23
 Identities = 72/231 (31%), Positives = 117/231 (50%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTC--ELENLILRAKDG 644
             GL+N GN+CY N VLQ L F  P     L   +  +  KK+   TC  +L + I   K  
Sbjct:    46 GLVNFGNTCYCNSVLQALYFCRPFRDKVLA--YKSQPRKKENLLTCLADLFHSIATQKKK 103

Query:   645 KSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEA------GVNASGP 698
                + P   ++RL+       N  ++DAHEFL Y ++T+  +  EE       G   +G 
Sbjct:   104 VGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRLPNGN 163

Query:   699 LEDET------TLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALR 752
             +++E       T +   F G L ++ +C  C   S + E  +DL+V++E +  ++   LR
Sbjct:   164 IDNENNSPPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNT-SITHCLR 222

Query:   753 RYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFSPL 803
              ++ TE L  E KY C+ C+S ++A K++ + + P IL + LKRF+    L
Sbjct:   223 GFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQL 273


>UNIPROTKB|O75317 [details] [associations]
            symbol:USP12 "Ubiquitin carboxyl-terminal hydrolase 12"
            species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0006464 "cellular
            protein modification process" evidence=NAS] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IDA;TAS] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0016579 "protein deubiquitination" evidence=IDA]
            [GO:0004197 "cysteine-type endopeptidase activity" evidence=IMP]
            [GO:0004843 "ubiquitin-specific protease activity" evidence=IDA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 EMBL:CH471075 GO:GO:0006511
            GO:GO:0004197 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            eggNOG:COG5077 KO:K11842 CTD:219333 HOGENOM:HOG000231498
            OMA:SKFASFC OrthoDB:EOG42Z4Q8 EMBL:AF022789 EMBL:AK289685
            EMBL:AL158062 EMBL:AL355473 EMBL:BC026072 IPI:IPI00290893
            RefSeq:NP_872294.2 UniGene:Hs.42400 ProteinModelPortal:O75317
            SMR:O75317 IntAct:O75317 STRING:O75317 MEROPS:C19.020
            PhosphoSite:O75317 PaxDb:O75317 PRIDE:O75317
            Ensembl:ENST00000282344 GeneID:219333 KEGG:hsa:219333
            UCSC:uc001uqy.3 GeneCards:GC13M027640 HGNC:HGNC:20485 HPA:HPA007288
            MIM:603091 neXtProt:NX_O75317 PharmGKB:PA37236 HOVERGEN:HBG054038
            InParanoid:O75317 GenomeRNAi:219333 NextBio:90574 Bgee:O75317
            CleanEx:HS_USP12 Genevestigator:O75317 GermOnline:ENSG00000152484
            Uniprot:O75317
        Length = 370

 Score = 280 (103.6 bits), Expect = 1.4e-23, P = 1.4e-23
 Identities = 72/232 (31%), Positives = 117/232 (50%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTC--ELENLILRAKDG 644
             GL+N GN+CY N VLQ L F  P     L   +  +  KK+   TC  +L + I   K  
Sbjct:    40 GLVNFGNTCYCNSVLQALYFCRPFREKVLA--YKSQPRKKESLLTCLADLFHSIATQKKK 97

Query:   645 KSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEA------GVNASGP 698
                + P   ++RL+       N  ++DAHEFL Y ++T+  +  EE       G   +G 
Sbjct:    98 VGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRLPNGN 157

Query:   699 LEDET-------TLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEAL 751
             +++E        T +   F G L ++ +C  C   S + E  +DL+V++E +  ++   L
Sbjct:   158 IDNENNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNT-SITHCL 216

Query:   752 RRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFSPL 803
             R ++ TE L  E KY C+ C+S ++A K++ + + P IL + LKRF+    L
Sbjct:   217 RGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQL 268


>UNIPROTKB|Q2LZB1 [details] [associations]
            symbol:Usp36 "Ubiquitin carboxyl-terminal hydrolase 36"
            species:46245 "Drosophila pseudoobscura pseudoobscura" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISS] [GO:0005730
            "nucleolus" evidence=ISS] [GO:0016579 "protein deubiquitination"
            evidence=ISS] [GO:0030718 "germ-line stem cell maintenance"
            evidence=ISS] [GO:0035019 "somatic stem cell maintenance"
            evidence=ISS] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005730
            GO:GO:0008234 GO:GO:0006511 GO:GO:0035019 GO:GO:0030718
            GO:GO:0016579 GO:GO:0004221 EMBL:CH379069 eggNOG:COG5533
            HSSP:P40818 KO:K11855 OrthoDB:EOG4WM38P RefSeq:XP_001353862.2
            GeneID:4813226 KEGG:dpo:Dpse_GA18934 FlyBase:FBgn0078933
            InParanoid:Q2LZB1 Uniprot:Q2LZB1
        Length = 1059

 Score = 305 (112.4 bits), Expect = 1.8e-23, P = 1.8e-23
 Identities = 73/218 (33%), Positives = 107/218 (49%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFL-QGLHSKEC---AKKDWCFTCELENLILRAK 642
             G+IN GN+CY N  LQ L   P L  + + +  H + C        C  C +   +   +
Sbjct:   172 GMINVGNTCYLNSTLQALFHIPALANWLVSEQTHLENCNITESNGGCIICAMAKTLQSTQ 231

Query:   643 DGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEE-AGVNASGPLED 701
               +S + P  I S+L+ I   +  GR+EDAHEFLR+ ++ M+   +           L  
Sbjct:   232 SCQSAMRPFHIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMEKAYLMRFRNFKELDQLVK 291

Query:   702 ETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILD 761
             ETT +   FGGYLRS+++C  C   S   +   DL ++I      LEEA   Y   E L+
Sbjct:   292 ETTPLNQIFGGYLRSEVRCLSCSHVSITFQHFQDLLLDIRKS-DTLEEAFDGYFSRERLE 350

Query:   762 GENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQV 799
              +  YKC+ CK    A K+ ++  AP  L I LKRF +
Sbjct:   351 -DMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSM 387


>UNIPROTKB|Q52KZ6 [details] [associations]
            symbol:usp12-a "Ubiquitin carboxyl-terminal hydrolase 12-A"
            species:8355 "Xenopus laevis" [GO:0004197 "cysteine-type
            endopeptidase activity" evidence=ISS] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISS] [GO:0016579
            "protein deubiquitination" evidence=ISS] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0006511 GO:GO:0004197 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 HSSP:Q93009 EMBL:BC094130
            RefSeq:NP_001089397.1 UniGene:Xl.52535 GeneID:734447
            KEGG:xla:734447 CTD:734447 Xenbase:XB-GENE-1009335 KO:K11842
            Uniprot:Q52KZ6
        Length = 370

 Score = 279 (103.3 bits), Expect = 1.8e-23, P = 1.8e-23
 Identities = 72/232 (31%), Positives = 117/232 (50%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTC--ELENLILRAKDG 644
             GL+N GN+CY N VLQ L F  P     L   +  +  KK+   TC  +L + I   K  
Sbjct:    40 GLVNFGNTCYCNSVLQALYFCRPFREKVLA--YKSQPRKKENLLTCLSDLFHSIATQKKK 97

Query:   645 KSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEA------GVNASGP 698
                + P   ++RL+       N  ++DAHEFL Y ++T+  +  EE       G   +G 
Sbjct:    98 VGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRIPNGN 157

Query:   699 LEDET-------TLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEAL 751
             +++E        T +   F G L ++ +C  C   S + E  +DL+V++E +  ++   L
Sbjct:   158 IDNENNNSAPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNT-SITHCL 216

Query:   752 RRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFSPL 803
             R ++ TE L  E KY C+ C+S ++A K++ + + P IL + LKRF+    L
Sbjct:   217 RGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQL 268


>UNIPROTKB|Q5M981 [details] [associations]
            symbol:usp12-b "Ubiquitin carboxyl-terminal hydrolase 12-B"
            species:8355 "Xenopus laevis" [GO:0004197 "cysteine-type
            endopeptidase activity" evidence=ISS] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISS] [GO:0016579
            "protein deubiquitination" evidence=ISS] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0006511 GO:GO:0004197 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 HSSP:Q93009 EMBL:BC087530
            UniGene:Xl.49982 Xenbase:XB-GENE-6252498 Uniprot:Q5M981
        Length = 370

 Score = 279 (103.3 bits), Expect = 1.8e-23, P = 1.8e-23
 Identities = 72/232 (31%), Positives = 117/232 (50%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTC--ELENLILRAKDG 644
             GL+N GN+CY N VLQ L F  P     L   +  +  KK+   TC  +L + I   K  
Sbjct:    40 GLVNFGNTCYCNSVLQALYFCRPFREKVLA--YKSQPRKKENLLTCLSDLFHSIATQKKK 97

Query:   645 KSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEA------GVNASGP 698
                + P   ++RL+       N  ++DAHEFL Y ++T+  +  EE       G   +G 
Sbjct:    98 VGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRIPNGN 157

Query:   699 LEDET-------TLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEAL 751
             +++E        T +   F G L ++ +C  C   S + E  +DL+V++E +  ++   L
Sbjct:   158 IDNENNNNTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNT-SITHCL 216

Query:   752 RRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFSPL 803
             R ++ TE L  E KY C+ C+S ++A K++ + + P IL + LKRF+    L
Sbjct:   217 RGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQL 268


>UNIPROTKB|E2RG22 [details] [associations]
            symbol:USP12 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0016579 "protein
            deubiquitination" evidence=IEA] [GO:0004843 "ubiquitin-specific
            protease activity" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0004197 "cysteine-type
            endopeptidase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0006511 GO:GO:0004197
            GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 KO:K11842 CTD:219333
            GeneTree:ENSGT00650000093027 OMA:SKFASFC EMBL:AAEX03014246
            EMBL:AAEX03014247 RefSeq:XP_543159.2 Ensembl:ENSCAFT00000024112
            GeneID:486033 KEGG:cfa:486033 NextBio:20859899 Uniprot:E2RG22
        Length = 370

 Score = 278 (102.9 bits), Expect = 2.3e-23, P = 2.3e-23
 Identities = 72/232 (31%), Positives = 116/232 (50%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTC--ELENLILRAKDG 644
             GL+N GN+CY N VLQ L F  P     L   +  +  KK+   TC  +L + I   K  
Sbjct:    40 GLVNFGNTCYCNSVLQALYFCRPFREKVLA--YKSQPRKKENLLTCLADLFHSIATQKKK 97

Query:   645 KSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEA------GVNASGP 698
                + P   ++RL+       N  ++DAHEFL Y ++T+  +  EE       G   +G 
Sbjct:    98 VGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRLPNGN 157

Query:   699 LEDET-------TLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEAL 751
             ++ E        T +   F G L ++ +C  C   S + E  +DL+V++E +  ++   L
Sbjct:   158 IDSENNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNT-SITHCL 216

Query:   752 RRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFSPL 803
             R ++ TE L  E KY C+ C+S ++A K++ + + P IL + LKRF+    L
Sbjct:   217 RGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQL 268


>UNIPROTKB|F1RTK0 [details] [associations]
            symbol:USP12 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0016579 "protein deubiquitination"
            evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            GO:GO:0006511 GO:GO:0004197 GO:GO:0004843 GO:GO:0016579
            GO:GO:0004221 GeneTree:ENSGT00650000093027 OMA:SKFASFC
            EMBL:CU062619 Ensembl:ENSSSCT00000010190 Uniprot:F1RTK0
        Length = 374

 Score = 278 (102.9 bits), Expect = 2.3e-23, P = 2.3e-23
 Identities = 72/232 (31%), Positives = 116/232 (50%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTC--ELENLILRAKDG 644
             GL+N GN+CY N VLQ L F  P     L   +  +  KK+   TC  +L + I   K  
Sbjct:    44 GLVNFGNTCYCNSVLQALYFCRPFREKVLA--YKSQPRKKESLLTCLADLFHSIATQKKK 101

Query:   645 KSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEA------GVNASGP 698
                + P   ++RL+       N  ++DAHEFL Y ++T+  +  EE       G   +G 
Sbjct:   102 VGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRLPNGN 161

Query:   699 LEDET-------TLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEAL 751
             ++ E        T +   F G L ++ +C  C   S + E  +DL+V++E +  ++   L
Sbjct:   162 IDTENNHSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNT-SITHCL 220

Query:   752 RRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFSPL 803
             R ++ TE L  E KY C+ C+S ++A K++ + + P IL + LKRF+    L
Sbjct:   221 RGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQL 272


>UNIPROTKB|B3M3M6 [details] [associations]
            symbol:Usp36 "Ubiquitin carboxyl-terminal hydrolase 36"
            species:7217 "Drosophila ananassae" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0005730 "nucleolus"
            evidence=ISS] [GO:0016579 "protein deubiquitination" evidence=ISS]
            [GO:0030718 "germ-line stem cell maintenance" evidence=ISS]
            [GO:0035019 "somatic stem cell maintenance" evidence=ISS]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005730 GO:GO:0008234
            GO:GO:0006511 GO:GO:0035019 GO:GO:0030718 GO:GO:0016579
            GO:GO:0004221 eggNOG:COG5533 EMBL:CH902618 KO:K11855
            RefSeq:XP_001957513.1 EnsemblMetazoa:FBtr0128692 GeneID:6506628
            KEGG:dan:Dana_GF23992 FlyBase:FBgn0100986 InParanoid:B3M3M6
            OrthoDB:EOG4WM38P Uniprot:B3M3M6
        Length = 1091

 Score = 310 (114.2 bits), Expect = 2.6e-23, Sum P(2) = 2.6e-23
 Identities = 73/218 (33%), Positives = 111/218 (50%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFL-QGLHSKECAKKD---WCFTCELENLILRAK 642
             G+IN GN+CY N  LQ L   P L  + + +  H + C   +   +C  C +   +   +
Sbjct:   177 GMINAGNTCYLNSTLQALFHIPALANWLVSEQAHMENCNVSESGSFCIICAMAKTLQATQ 236

Query:   643 DGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEE-AGVNASGPLED 701
               +S + P  I ++L+ I   +  GR+EDAHEFLR+ ++ M+   +           L  
Sbjct:   237 TTQSAVRPFLIYTKLKQICKHMIVGRQEDAHEFLRFLVEAMERAYLMRFRNYKELDQLVK 296

Query:   702 ETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILD 761
             ETT +G  FGGYLRS+++C  C+  S   +   DL ++I     +LEEA   Y   E L+
Sbjct:   297 ETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKS-DSLEEAFEGYFSREKLE 355

Query:   762 GENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQV 799
              +  YKC+ CK    A K+  +  AP  L I LKRF +
Sbjct:   356 -DFGYKCEGCKKKVSATKQFRLERAPITLCIQLKRFSM 392

 Score = 43 (20.2 bits), Expect = 2.6e-23, Sum P(2) = 2.6e-23
 Identities = 8/29 (27%), Positives = 16/29 (55%)

Query:   463 SNGLNISGGTSLRFEKSNIVTNDIGSSSN 491
             +NG N++G T+  F   N     +G++ +
Sbjct:    90 TNGCNLNGNTANTFGNKNNAGKIVGANGH 118


>MGI|MGI:1270128 [details] [associations]
            symbol:Usp12 "ubiquitin specific peptidase 12" species:10090
            "Mus musculus" [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=ISO] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=ISO] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0016579
            "protein deubiquitination" evidence=ISO] [GO:0016787 "hydrolase
            activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            MGI:MGI:1270128 GO:GO:0006511 GO:GO:0004197 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 HSSP:Q93009 eggNOG:COG5077 KO:K11842
            CTD:219333 GeneTree:ENSGT00650000093027 HOGENOM:HOG000231498
            OMA:SKFASFC OrthoDB:EOG42Z4Q8 MEROPS:C19.020 HOVERGEN:HBG054038
            EMBL:AK006739 EMBL:AK035629 EMBL:AK167153 EMBL:BC049274
            EMBL:BC055398 EMBL:BC068136 EMBL:AF441835 IPI:IPI00228375
            IPI:IPI00938515 RefSeq:NP_035799.1 UniGene:Mm.167971
            ProteinModelPortal:Q9D9M2 SMR:Q9D9M2 STRING:Q9D9M2
            PhosphoSite:Q9D9M2 PaxDb:Q9D9M2 PRIDE:Q9D9M2
            Ensembl:ENSMUST00000085614 GeneID:22217 KEGG:mmu:22217
            UCSC:uc008xtg.1 InParanoid:Q80Y43 NextBio:302225 Bgee:Q9D9M2
            CleanEx:MM_USP12 Genevestigator:Q9D9M2
            GermOnline:ENSMUSG00000029640 Uniprot:Q9D9M2
        Length = 370

 Score = 277 (102.6 bits), Expect = 2.9e-23, P = 2.9e-23
 Identities = 72/232 (31%), Positives = 117/232 (50%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTC--ELENLILRAKDG 644
             GL+N GN+CY N VLQ L F  P     L   +  +  KK+   TC  +L + I   K  
Sbjct:    40 GLVNFGNTCYCNSVLQALYFCRPFREKVLA--YKSQPRKKENLLTCLADLFHSIATQKKK 97

Query:   645 KSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEA------GVNASGP 698
                + P   ++RL+       N  ++DAHEFL Y ++T+  +  EE       G   +G 
Sbjct:    98 VGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRLRNGD 157

Query:   699 LEDET-------TLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEAL 751
             +++E        T +   F G L ++ +C  C   S + E  +DL+V++E +  ++   L
Sbjct:   158 VDNEDNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNT-SITHCL 216

Query:   752 RRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFSPL 803
             R ++ TE L  E KY C+ C+S ++A K++ + + P IL + LKRF+    L
Sbjct:   217 RGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPLILALHLKRFKYMDQL 268


>RGD|1308045 [details] [associations]
            symbol:Usp12 "ubiquitin specific peptidase 12" species:10116
            "Rattus norvegicus" [GO:0004197 "cysteine-type endopeptidase
            activity" evidence=ISO] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA;ISO] [GO:0004843 "ubiquitin-specific
            protease activity" evidence=ISO] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0016579 "protein
            deubiquitination" evidence=ISO] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 RGD:1308045 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00650000093027 IPI:IPI00188181 PRIDE:F1LWD4
            Ensembl:ENSRNOT00000044038 Uniprot:F1LWD4
        Length = 354

 Score = 277 (102.6 bits), Expect = 2.9e-23, P = 2.9e-23
 Identities = 72/232 (31%), Positives = 116/232 (50%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTC--ELENLILRAKDG 644
             GL+N GN+CY N VLQ L F  P     L   +  +  KK+   TC  +L + I   K  
Sbjct:    24 GLVNFGNTCYCNSVLQALYFCRPFRDKVLA--YKSQPRKKESLLTCLADLFHSIATQKKK 81

Query:   645 KSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEA------GVNASGP 698
                + P   ++RL+       N  ++DAHEFL Y ++T+  +  EE       G   +G 
Sbjct:    82 VGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRLRNGD 141

Query:   699 LEDET-------TLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEAL 751
             ++ E        T +   F G L ++ +C  C   S + E  +DL+V++E +  ++   L
Sbjct:   142 VDSEDNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNT-SITHCL 200

Query:   752 RRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFSPL 803
             R ++ TE L  E KY C+ C+S ++A K++ + + P IL + LKRF+    L
Sbjct:   201 RGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQL 252


>UNIPROTKB|C0HB46 [details] [associations]
            symbol:usp12 "Ubiquitin carboxyl-terminal hydrolase 12"
            species:8030 "Salmo salar" [GO:0004197 "cysteine-type endopeptidase
            activity" evidence=ISS] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=ISS] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=ISS] [GO:0016579 "protein deubiquitination"
            evidence=ISS] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0006511
            GO:GO:0004197 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            EMBL:BT044911 EMBL:BT059552 RefSeq:NP_001133405.1 UniGene:Ssa.17383
            GeneID:100194904 CTD:100194904 Uniprot:C0HB46
        Length = 372

 Score = 275 (101.9 bits), Expect = 4.8e-23, P = 4.8e-23
 Identities = 72/234 (30%), Positives = 118/234 (50%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTC--ELENLILRAKDG 644
             GL+N GN+CY N VLQ L F  P     L   +  +  +K+   TC  +L + I   K  
Sbjct:    40 GLVNFGNTCYCNSVLQALYFCRPFREKILA--YRSQPRRKENLLTCLADLFHSIANQKRK 97

Query:   645 KSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEA------GVNASGP 698
                + P   ++RL+       N  ++DAHEFL Y ++T+  +  EE       G  A+G 
Sbjct:    98 VGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADLLQEERKQDKTNGRLANGS 157

Query:   699 LEDE---------TTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEE 749
             L+ +         +T +   F G L ++ +C  C   S + E  +DL+V++E +  ++  
Sbjct:   158 LDSQNHNSNAPPPSTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNT-SITH 216

Query:   750 ALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFSPL 803
              LR ++ TE L  E KY C+ C+S ++A K++ + + P IL + LKRF+    L
Sbjct:   217 CLRGFSNTETLCSEYKYYCEECRSKQEAHKRMRVKKLPMILALHLKRFKYMEQL 270


>UNIPROTKB|B4IXE0 [details] [associations]
            symbol:Usp36 "Ubiquitin carboxyl-terminal hydrolase 36"
            species:7222 "Drosophila grimshawi" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0005730 "nucleolus"
            evidence=ISS] [GO:0016579 "protein deubiquitination" evidence=ISS]
            [GO:0030718 "germ-line stem cell maintenance" evidence=ISS]
            [GO:0035019 "somatic stem cell maintenance" evidence=ISS]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005730 GO:GO:0008234
            GO:GO:0006511 GO:GO:0035019 GO:GO:0030718 GO:GO:0016579
            GO:GO:0004221 eggNOG:COG5533 EMBL:CH916366 KO:K11855
            OrthoDB:EOG4WM38P RefSeq:XP_001984029.1 EnsemblMetazoa:FBtr0151629
            GeneID:6558136 KEGG:dgr:Dgri_GH16215 FlyBase:FBgn0123686
            InParanoid:B4IXE0 OMA:PYESASE Uniprot:B4IXE0
        Length = 1240

 Score = 300 (110.7 bits), Expect = 7.9e-23, P = 7.9e-23
 Identities = 72/220 (32%), Positives = 109/220 (49%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFL-QGLHSKEC-----AKKDWCFTCELENLILR 640
             G++N GN+CY N  LQ L   P L  + + +  H + C        + C  C +   +  
Sbjct:   203 GMLNVGNTCYLNSSLQALFHIPSLANWLVSESAHLENCNISESCGSNGCIICAMAKTLQS 262

Query:   641 AKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEE-AGVNASGPL 699
              +  +S + P  I S+L+ I   +  GR+EDAHEFLR+ I+ M+   +           L
Sbjct:   263 TQSNQSAVRPFLIYSKLRQICKHMVVGRQEDAHEFLRFLIEAMEKAYLMRFRNYKELDQL 322

Query:   700 EDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEI 759
               ETT +   FGGYLRS+++C  C+  S   +   DL ++I      LE+A   Y   E 
Sbjct:   323 VKETTPLNQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKS-DTLEDAFDGYFSRER 381

Query:   760 LDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQV 799
             L+ +  YKC+ CK    A K+ ++  AP  L I LKRF +
Sbjct:   382 LE-DMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSM 420


>UNIPROTKB|E2R587 [details] [associations]
            symbol:USP46 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00650000093027 OMA:TEPTWVH EMBL:AAEX03009057
            EMBL:AAEX03009058 Ensembl:ENSCAFT00000039391 Uniprot:E2R587
        Length = 355

 Score = 272 (100.8 bits), Expect = 1.0e-22, P = 1.0e-22
 Identities = 74/232 (31%), Positives = 114/232 (49%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTC--ELENLILRAKDG 644
             GL+N GN+CY N VLQ L F  P     L   +  +  KK+   TC  +L + I   K  
Sbjct:    26 GLVNFGNTCYCNSVLQALYFCRPFRENVLA--YKAQQKKKENLLTCLADLFHSIATQKKK 83

Query:   645 KSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEA------GV----N 694
                + P   +SRL+       N  ++DAHEFL Y ++T+  +  EE       G     N
Sbjct:    84 VGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLKNGN 143

Query:   695 ASGPLED---ETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEAL 751
              + P E+   E T +   F G L ++ +C  C   S + E  + L+V++E +       L
Sbjct:   144 MNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLALSVDVEQNTST--HCL 201

Query:   752 RRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFSPL 803
             R ++ TE L  E KY C+ C S ++A+K++ + + P IL + LKRF+    L
Sbjct:   202 RDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQL 253


>UNIPROTKB|B4LG38 [details] [associations]
            symbol:Usp36 "Ubiquitin carboxyl-terminal hydrolase 36"
            species:7244 "Drosophila virilis" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0005730 "nucleolus"
            evidence=ISS] [GO:0016579 "protein deubiquitination" evidence=ISS]
            [GO:0030718 "germ-line stem cell maintenance" evidence=ISS]
            [GO:0035019 "somatic stem cell maintenance" evidence=ISS]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005730 GO:GO:0008234
            GO:GO:0006511 GO:GO:0035019 GO:GO:0030718 GO:GO:0016579
            GO:GO:0004221 EMBL:CH940647 eggNOG:COG5533 KO:K11855
            OrthoDB:EOG4WM38P OMA:PYESASE RefSeq:XP_002047004.1
            EnsemblMetazoa:FBtr0229117 GeneID:6622549 KEGG:dvi:Dvir_GJ13192
            FlyBase:FBgn0200418 InParanoid:B4LG38 Uniprot:B4LG38
        Length = 1214

 Score = 298 (110.0 bits), Expect = 1.3e-22, P = 1.3e-22
 Identities = 72/220 (32%), Positives = 109/220 (49%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFL-QGLHSKECAKKD-----WCFTCELENLILR 640
             G++N GN+CY N  LQ L   P L  + + +  H + C   +      C  C +   +  
Sbjct:   193 GMLNVGNTCYLNSTLQALFHIPALANWLVSETSHVENCNISESCGSGGCIICAMAKTLQT 252

Query:   641 AKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEE-AGVNASGPL 699
              +  +S + P  I ++L+ I   +  GR+EDAHEFLR+ ++ M+   +           L
Sbjct:   253 TQSNQSAVRPFLIYTKLRQICKHMVVGRQEDAHEFLRFLVEAMEKAYLMRFRNFKELDQL 312

Query:   700 EDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEI 759
               ETT I   FGGYLRS+++C  C+  S   +   DL ++I      LEEA   Y   E 
Sbjct:   313 VKETTPISQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIR-KADTLEEAFDGYFSRER 371

Query:   760 LDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQV 799
             L+ +  YKC+ CK    A K+ ++  AP  L I LKRF +
Sbjct:   372 LE-DMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSM 410


>UNIPROTKB|F1LSW9 [details] [associations]
            symbol:RGD1561481 "Ubiquitin carboxyl-terminal hydrolase"
            species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 GeneTree:ENSGT00650000093027 IPI:IPI00554220
            Ensembl:ENSRNOT00000016098 ArrayExpress:F1LSW9 Uniprot:F1LSW9
        Length = 359

 Score = 270 (100.1 bits), Expect = 1.7e-22, P = 1.7e-22
 Identities = 71/232 (30%), Positives = 115/232 (49%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTC--ELENLILRAKDG 644
             GL+N GN+CY N +LQ L F  P     L   +  +  KK+   TC  +L + I   K  
Sbjct:    39 GLVNFGNTCYCNSILQALYFCRPFRDKVLA--YKSQPRKKESLLTCLADLFHSIATQKKK 96

Query:   645 KSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEA------GVNASGP 698
                + P   ++RL+       N  ++DAHEFL Y ++T+  +  EE       G   +G 
Sbjct:    97 VGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNGRLRNGD 156

Query:   699 LEDET-------TLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEAL 751
             ++ E        T +   F G L ++ +C  C   S + E  +DL+V++E +  ++   L
Sbjct:   157 VDSEDNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNT-SITHCL 215

Query:   752 RRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFSPL 803
             R ++ TE L  E KY C+ C+S ++A K++   + P IL + LKRF+    L
Sbjct:   216 RGFSNTETLCSEYKYYCEECRSKQEAHKRMKEKKLPMILALHLKRFKYMDQL 267


>UNIPROTKB|B4KXJ5 [details] [associations]
            symbol:Usp36 "Ubiquitin carboxyl-terminal hydrolase 36"
            species:7230 "Drosophila mojavensis" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0005730 "nucleolus"
            evidence=ISS] [GO:0016579 "protein deubiquitination" evidence=ISS]
            [GO:0030718 "germ-line stem cell maintenance" evidence=ISS]
            [GO:0035019 "somatic stem cell maintenance" evidence=ISS]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005730 GO:GO:0008234
            GO:GO:0006511 GO:GO:0035019 GO:GO:0030718 GO:GO:0016579
            GO:GO:0004221 EMBL:CH933809 KO:K11855 RefSeq:XP_002008205.1
            EnsemblMetazoa:FBtr0164086 GeneID:6582504 KEGG:dmo:Dmoj_GI13361
            FlyBase:FBgn0136118 InParanoid:B4KXJ5 OrthoDB:EOG4VMCZ7
            Uniprot:B4KXJ5
        Length = 1185

 Score = 294 (108.6 bits), Expect = 3.3e-22, P = 3.3e-22
 Identities = 70/220 (31%), Positives = 109/220 (49%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFL-QGLHSKECAKKD-----WCFTCELENLILR 640
             G++N GN+CY N  LQ L   P L  + + +  H + C   +      C  C +   +  
Sbjct:   200 GMLNVGNTCYLNSTLQALFHIPALANWLVSETAHVENCNISESCGSGGCIICAMAKTLQT 259

Query:   641 AKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEE-AGVNASGPL 699
              +  ++ + P  I ++L+ I   +  GR+EDAHEFLR+ ++ M+   +           L
Sbjct:   260 TQSNQTAVRPFLIYTKLRQICKHMVVGRQEDAHEFLRFLVEAMEKAYLMRFRNYKELDQL 319

Query:   700 EDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEI 759
               ETT +   FGGYLRS+++C  C+  S   +   DL ++I      LEEA   Y   E 
Sbjct:   320 VKETTPLSQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIR-KADTLEEAFDGYFSRER 378

Query:   760 LDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQV 799
             L+ +  YKC+ CK    A K+ ++  AP  L I LKRF +
Sbjct:   379 LE-DMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSM 417


>UNIPROTKB|H7BZK6 [details] [associations]
            symbol:USP46 "Ubiquitin carboxyl-terminal hydrolase 46"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00973 PROSITE:PS50235
            GO:GO:0006511 GO:GO:0004221 HGNC:HGNC:20075 EMBL:AC026448
            ProteinModelPortal:H7BZK6 SMR:H7BZK6 Ensembl:ENST00000451218
            Bgee:H7BZK6 Uniprot:H7BZK6
        Length = 339

 Score = 267 (99.0 bits), Expect = 3.5e-22, P = 3.5e-22
 Identities = 72/227 (31%), Positives = 113/227 (49%)

Query:   592 GNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTC--ELENLILRAKDGKSPLS 649
             GN+CY N VLQ L F  P     L   +  +  KK+   TC  +L + I   K     + 
Sbjct:    14 GNTCYCNSVLQALYFCRPFRENVLA--YKAQQKKKENLLTCLADLFHSIATQKKKVGVIP 71

Query:   650 PIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEA------GV----NASGPL 699
             P   +SRL+       N  ++DAHEFL Y ++T+  +  EE       G     N + P 
Sbjct:    72 PKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNGKLKNGNMNEPA 131

Query:   700 ED---ETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTG 756
             E+   E T +   F G L ++ +C  C   S + E  +DL+V++E +  ++   LR ++ 
Sbjct:   132 ENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNT-SITHCLRDFSN 190

Query:   757 TEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFSPL 803
             TE L  E KY C+ C S ++A+K++ + + P IL + LKRF+    L
Sbjct:   191 TETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQL 237


>ZFIN|ZDB-GENE-060512-211 [details] [associations]
            symbol:usp22 "ubiquitin specific peptidase 22"
            species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0016568 "chromatin modification" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0007049 "cell
            cycle" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            ZFIN:ZDB-GENE-060512-211 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
            GO:GO:0008270 GO:GO:0008234 GO:GO:0006351 GO:GO:0016568
            GO:GO:0007049 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0004221 eggNOG:COG5533 KO:K11366 HOGENOM:HOG000007260
            CTD:23326 HOVERGEN:HBG058014 OrthoDB:EOG48PMJS EMBL:BC116508
            EMBL:BC146618 IPI:IPI00855315 IPI:IPI00923761 RefSeq:NP_001038713.1
            UniGene:Dr.87145 ProteinModelPortal:A6H8I0 STRING:A6H8I0
            MEROPS:C19.035 PRIDE:A6H8I0 GeneID:692275 KEGG:dre:692275
            NextBio:20902479 Bgee:A6H8I0 Uniprot:A6H8I0
        Length = 506

 Score = 226 (84.6 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
 Identities = 51/157 (32%), Positives = 77/157 (49%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDG-K 645
             GLIN GN+C+ N ++Q L  TP L  +FL   H  E      C  CE+  L      G +
Sbjct:   160 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQSNS-CLVCEMSQLFQEFYSGHR 218

Query:   646 SPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTL 705
             SP  P  +L  + +    L    ++DAHEFL  A+D +   C ++ G  A+ P      +
Sbjct:   219 SPHIPFRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKDDNGKKANNP-NHCNCI 277

Query:   706 IGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEG 742
             I   F G L+S + C  CHG S   +   D+++++ G
Sbjct:   278 IDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPG 314

 Score = 103 (41.3 bits), Expect = 1.6e-21, Sum P(2) = 1.6e-21
 Identities = 21/52 (40%), Positives = 30/52 (57%)

Query:   747 LEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
             L + LRR+T  E L    K KC  C SY+++ K+LT+   P +    LKRF+
Sbjct:   343 LTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKRLPIVACFHLKRFE 394


>UNIPROTKB|F1PLI6 [details] [associations]
            symbol:USP22 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0045931 "positive
            regulation of mitotic cell cycle" evidence=IEA] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0030374 "ligand-dependent nuclear receptor transcription
            coactivator activity" evidence=IEA] [GO:0016578 "histone
            deubiquitination" evidence=IEA] [GO:0016574 "histone
            ubiquitination" evidence=IEA] [GO:0010485 "H4 histone
            acetyltransferase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA] [GO:0000124
            "SAGA complex" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0045893
            GO:GO:0046872 GO:GO:0045931 GO:GO:0008270 GO:GO:0000124
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0030374
            GO:GO:0016578 GO:GO:0004843 GO:GO:0004221 GO:GO:0016574
            GO:GO:0010485 GeneTree:ENSGT00690000101718 OMA:IHEHAKA
            EMBL:AAEX03003735 EMBL:AAEX03003736 Ensembl:ENSCAFT00000029408
            Uniprot:F1PLI6
        Length = 471

 Score = 221 (82.9 bits), Expect = 3.2e-21, Sum P(2) = 3.2e-21
 Identities = 51/158 (32%), Positives = 78/158 (49%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDG-K 645
             GLIN GN+C+ N ++Q L  TP L  +FL   H  E      C  CE+ +L      G +
Sbjct:   123 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQEFYSGHR 182

Query:   646 SPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCI-EEAGVNASGPLEDETT 704
             SP  P  +L  + +    L    ++DAHEFL  A+D +   C  ++ G  A+ P      
Sbjct:   183 SPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNP-NHCNC 241

Query:   705 LIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEG 742
             +I   F G L+S + C  CHG S   +   D+++++ G
Sbjct:   242 IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPG 279

 Score = 104 (41.7 bits), Expect = 3.2e-21, Sum P(2) = 3.2e-21
 Identities = 21/52 (40%), Positives = 31/52 (59%)

Query:   747 LEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
             L + LRR+T  E L    K KC  C SY+++ K+LT+ + P +    LKRF+
Sbjct:   308 LTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 359


>WB|WBGene00011216 [details] [associations]
            symbol:usp-46 species:6239 "Caenorhabditis elegans"
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0040027 "negative regulation of vulval
            development" evidence=IMP] [GO:0005768 "endosome" evidence=IDA]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0044297 "cell body"
            evidence=IDA] [GO:0071947 "protein deubiquitination involved in
            ubiquitin-dependent protein catabolic process" evidence=IMP]
            [GO:2000311 "regulation of
            alpha-amino-3-hydroxy-5-methyl-4-isoxazole propionate selective
            glutamate receptor activity" evidence=IMP] [GO:0035255 "ionotropic
            glutamate receptor binding" evidence=IPI] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0005768 GO:GO:0008234 GO:GO:0040027
            GO:GO:0044297 GO:GO:0004221 EMBL:Z29095 GO:GO:2000311
            eggNOG:COG5077 GO:GO:0071947 KO:K11842 GeneTree:ENSGT00650000093027
            HOGENOM:HOG000231498 PIR:S40715 RefSeq:NP_499162.2
            RefSeq:NP_499163.2 UniGene:Cel.6955 ProteinModelPortal:P34547
            SMR:P34547 STRING:P34547 MEROPS:C19.A37 PaxDb:P34547 PRIDE:P34547
            EnsemblMetazoa:R10E11.3a.1 EnsemblMetazoa:R10E11.3a.2 GeneID:176381
            KEGG:cel:CELE_R10E11.3 UCSC:R10E11.3a.1 CTD:176381
            WormBase:R10E11.3a WormBase:R10E11.3b InParanoid:P34547 OMA:STDANIQ
            NextBio:892334 Uniprot:P34547
        Length = 426

 Score = 183 (69.5 bits), Expect = 3.4e-21, Sum P(2) = 3.4e-21
 Identities = 36/103 (34%), Positives = 61/103 (59%)

Query:   701 DETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEIL 760
             D TT I   F G L ++ +C  C   S + E  +DL++++E +  ++   LR ++ TE L
Sbjct:   192 DTTTWIHEIFQGILTNETRCLSCETVSSKDEDFLDLSIDVEQNT-SISHCLRVFSETETL 250

Query:   761 DGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFSPL 803
              G+ KY C+ C S ++A+K++ I + P +L + LKRF+   PL
Sbjct:   251 CGDQKYFCETCSSKQEAQKRMRIKKPPQLLALHLKRFKFVEPL 293

 Score = 143 (55.4 bits), Expect = 3.4e-21, Sum P(2) = 3.4e-21
 Identities = 36/108 (33%), Positives = 53/108 (49%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHS--KECAKKDWCFTC--ELENLILRAK 642
             GL+N GN+CY N V+Q L F  P     L    +  K  A KD   TC  +L + I   K
Sbjct:    28 GLVNFGNTCYCNSVIQALFFCRPFREKVLNYKQTLKKSGASKDNLVTCLADLFHSIASQK 87

Query:   643 DGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEE 690
                  ++P   +++L+       N  ++DAHEF  Y I+T+    I+E
Sbjct:    88 RRVGTIAPKRFITKLKKENELFDNYMQQDAHEFFNYLINTISETLIQE 135


>UNIPROTKB|F1NG36 [details] [associations]
            symbol:USP22 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
            GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0004221 GeneTree:ENSGT00690000101718
            OMA:IHEHAKA EMBL:AADN02023754 EMBL:AADN02023755 IPI:IPI00596070
            Ensembl:ENSGALT00000007615 Uniprot:F1NG36
        Length = 483

 Score = 221 (82.9 bits), Expect = 3.6e-21, Sum P(2) = 3.6e-21
 Identities = 51/158 (32%), Positives = 77/158 (48%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDG-K 645
             GLIN GN+C+ N ++Q L  TP L  +FL   H  E      C  CE+  L      G +
Sbjct:   135 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHKCEMQSPSSCLVCEMSTLFQEFYSGHR 194

Query:   646 SPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCI-EEAGVNASGPLEDETT 704
             SP  P  +L  + +    L    ++DAHEFL  A+D +   C  ++ G  A+ P      
Sbjct:   195 SPHIPYRLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNP-NHCNC 253

Query:   705 LIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEG 742
             +I   F G L+S + C  CHG S   +   D+++++ G
Sbjct:   254 IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPG 291

 Score = 104 (41.7 bits), Expect = 3.6e-21, Sum P(2) = 3.6e-21
 Identities = 21/52 (40%), Positives = 31/52 (59%)

Query:   747 LEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
             L + LRR+T  E L    K KC  C SY+++ K+LT+ + P +    LKRF+
Sbjct:   320 LTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 371


>UNIPROTKB|P0C8Z3 [details] [associations]
            symbol:USP22 "Ubiquitin carboxyl-terminal hydrolase 22"
            species:9913 "Bos taurus" [GO:0045931 "positive regulation of
            mitotic cell cycle" evidence=IEA] [GO:0045893 "positive regulation
            of transcription, DNA-dependent" evidence=IEA] [GO:0030374
            "ligand-dependent nuclear receptor transcription coactivator
            activity" evidence=IEA] [GO:0016578 "histone deubiquitination"
            evidence=IEA] [GO:0016574 "histone ubiquitination" evidence=IEA]
            [GO:0010485 "H4 histone acetyltransferase activity" evidence=IEA]
            [GO:0004843 "ubiquitin-specific protease activity" evidence=IEA]
            [GO:0000124 "SAGA complex" evidence=IEA] [GO:0007049 "cell cycle"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0045893
            GO:GO:0046872 GO:GO:0045931 GO:GO:0008270 GO:GO:0006351
            GO:GO:0007049 GO:GO:0000124 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0030374 GO:GO:0016578 GO:GO:0004843
            GO:GO:0004221 GO:GO:0016574 GO:GO:0010485 eggNOG:COG5533 KO:K11366
            GeneTree:ENSGT00690000101718 HOGENOM:HOG000007260 EMBL:EE333442
            EMBL:EH202007 EMBL:EV691513 IPI:IPI00707759 RefSeq:NP_001160039.1
            UniGene:Bt.12486 Ensembl:ENSBTAT00000011818 GeneID:509694
            KEGG:bta:509694 CTD:23326 HOVERGEN:HBG058014 OMA:DMEMIAK
            OrthoDB:EOG48PMJS NextBio:20869082 ArrayExpress:P0C8Z3
            Uniprot:P0C8Z3
        Length = 514

 Score = 221 (82.9 bits), Expect = 5.0e-21, Sum P(2) = 5.0e-21
 Identities = 51/158 (32%), Positives = 78/158 (49%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDG-K 645
             GLIN GN+C+ N ++Q L  TP L  +FL   H  E      C  CE+ +L      G +
Sbjct:   166 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQEFYSGHR 225

Query:   646 SPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCI-EEAGVNASGPLEDETT 704
             SP  P  +L  + +    L    ++DAHEFL  A+D +   C  ++ G  A+ P      
Sbjct:   226 SPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNP-NHCNC 284

Query:   705 LIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEG 742
             +I   F G L+S + C  CHG S   +   D+++++ G
Sbjct:   285 IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPG 322

 Score = 104 (41.7 bits), Expect = 5.0e-21, Sum P(2) = 5.0e-21
 Identities = 21/52 (40%), Positives = 31/52 (59%)

Query:   747 LEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
             L + LRR+T  E L    K KC  C SY+++ K+LT+ + P +    LKRF+
Sbjct:   351 LTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 402


>UNIPROTKB|Q9UPT9 [details] [associations]
            symbol:USP22 "Ubiquitin carboxyl-terminal hydrolase 22"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0003713
            "transcription coactivator activity" evidence=IDA] [GO:0030374
            "ligand-dependent nuclear receptor transcription coactivator
            activity" evidence=IMP] [GO:0000124 "SAGA complex" evidence=IDA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=IMP]
            [GO:0004843 "ubiquitin-specific protease activity"
            evidence=IMP;IDA] [GO:0009790 "embryo development" evidence=NAS]
            [GO:0016579 "protein deubiquitination" evidence=IDA] [GO:0016574
            "histone ubiquitination" evidence=IDA] [GO:0016578 "histone
            deubiquitination" evidence=IDA] [GO:0045931 "positive regulation of
            mitotic cell cycle" evidence=IMP] [GO:0010485 "H4 histone
            acetyltransferase activity" evidence=IDA] [GO:0070461 "SAGA-type
            complex" evidence=IDA] [GO:0043967 "histone H4 acetylation"
            evidence=IDA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0045893
            GO:GO:0046872 GO:GO:0045931 GO:GO:0008270 GO:GO:0006351
            GO:GO:0009790 GO:GO:0007049 GO:GO:0043967 GO:GO:0000124
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0030374
            GO:GO:0016578 GO:GO:0004843 GO:GO:0004221 GO:GO:0016574
            eggNOG:COG5533 KO:K11366 HOGENOM:HOG000007260 CTD:23326
            HOVERGEN:HBG058014 OrthoDB:EOG48PMJS MEROPS:C19.035 EMBL:AB028986
            EMBL:BC007196 EMBL:BC025317 EMBL:BC110499 EMBL:BC126898
            EMBL:BX640815 IPI:IPI00852960 IPI:IPI00923593 RefSeq:NP_056091.1
            UniGene:Hs.462492 ProteinModelPortal:Q9UPT9 SMR:Q9UPT9
            IntAct:Q9UPT9 MINT:MINT-1390273 STRING:Q9UPT9 PhosphoSite:Q9UPT9
            DMDM:78103328 PaxDb:Q9UPT9 PRIDE:Q9UPT9 Ensembl:ENST00000261497
            Ensembl:ENST00000537526 GeneID:23326 KEGG:hsa:23326 UCSC:uc002gyl.4
            UCSC:uc002gyn.4 GeneCards:GC17M020902 HGNC:HGNC:12621 HPA:HPA044980
            MIM:612116 neXtProt:NX_Q9UPT9 PharmGKB:PA37247 InParanoid:Q9UPT9
            ChiTaRS:USP22 GenomeRNAi:23326 NextBio:45232 ArrayExpress:Q9UPT9
            Bgee:Q9UPT9 CleanEx:HS_USP22 Genevestigator:Q9UPT9
            GermOnline:ENSG00000124422 Uniprot:Q9UPT9
        Length = 525

 Score = 221 (82.9 bits), Expect = 5.5e-21, Sum P(2) = 5.5e-21
 Identities = 51/158 (32%), Positives = 78/158 (49%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDG-K 645
             GLIN GN+C+ N ++Q L  TP L  +FL   H  E      C  CE+ +L      G +
Sbjct:   177 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQEFYSGHR 236

Query:   646 SPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCI-EEAGVNASGPLEDETT 704
             SP  P  +L  + +    L    ++DAHEFL  A+D +   C  ++ G  A+ P      
Sbjct:   237 SPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNP-NHCNC 295

Query:   705 LIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEG 742
             +I   F G L+S + C  CHG S   +   D+++++ G
Sbjct:   296 IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPG 333

 Score = 104 (41.7 bits), Expect = 5.5e-21, Sum P(2) = 5.5e-21
 Identities = 21/52 (40%), Positives = 31/52 (59%)

Query:   747 LEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
             L + LRR+T  E L    K KC  C SY+++ K+LT+ + P +    LKRF+
Sbjct:   362 LTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 413


>MGI|MGI:2144157 [details] [associations]
            symbol:Usp22 "ubiquitin specific peptidase 22" species:10090
            "Mus musculus" [GO:0000124 "SAGA complex" evidence=ISO] [GO:0003713
            "transcription coactivator activity" evidence=ISO] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISO;IDA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IC] [GO:0007049 "cell cycle"
            evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016568 "chromatin
            modification" evidence=IEA] [GO:0016574 "histone ubiquitination"
            evidence=ISO] [GO:0016578 "histone deubiquitination" evidence=ISO]
            [GO:0016579 "protein deubiquitination" evidence=ISO;IDA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030374
            "ligand-dependent nuclear receptor transcription coactivator
            activity" evidence=ISO] [GO:0043967 "histone H4 acetylation"
            evidence=ISO] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=ISO] [GO:0045931 "positive regulation of
            mitotic cell cycle" evidence=ISO] [GO:0046872 "metal ion binding"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 MGI:MGI:2144157
            GO:GO:0045893 GO:GO:0046872 GO:GO:0045931 GO:GO:0008270
            GO:GO:0006351 GO:GO:0007049 GO:GO:0000124 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 EMBL:AL646093 GO:GO:0030374
            GO:GO:0016578 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            GO:GO:0016574 GO:GO:0010485 eggNOG:COG5533 KO:K11366
            GeneTree:ENSGT00690000101718 CTD:23326 HOVERGEN:HBG058014
            OrthoDB:EOG48PMJS MEROPS:C19.035 EMBL:AK084022 EMBL:AK220368
            EMBL:AK155071 EMBL:AK160992 EMBL:BC058419 EMBL:BC080737
            IPI:IPI00228479 RefSeq:NP_001004143.2 UniGene:Mm.30602
            ProteinModelPortal:Q5DU02 SMR:Q5DU02 STRING:Q5DU02
            PhosphoSite:Q5DU02 PRIDE:Q5DU02 Ensembl:ENSMUST00000041683
            GeneID:216825 KEGG:mmu:216825 UCSC:uc007jhc.2 InParanoid:Q3U2W4
            OMA:IHEHAKA NextBio:375358 Bgee:Q5DU02 CleanEx:MM_USP22
            Genevestigator:Q5DU02 GermOnline:ENSMUSG00000042506 Uniprot:Q5DU02
        Length = 525

 Score = 221 (82.9 bits), Expect = 5.5e-21, Sum P(2) = 5.5e-21
 Identities = 51/158 (32%), Positives = 78/158 (49%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDG-K 645
             GLIN GN+C+ N ++Q L  TP L  +FL   H  E      C  CE+ +L      G +
Sbjct:   177 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQEFYSGHR 236

Query:   646 SPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCI-EEAGVNASGPLEDETT 704
             SP  P  +L  + +    L    ++DAHEFL  A+D +   C  ++ G  A+ P      
Sbjct:   237 SPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNP-NHCNC 295

Query:   705 LIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEG 742
             +I   F G L+S + C  CHG S   +   D+++++ G
Sbjct:   296 IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPG 333

 Score = 104 (41.7 bits), Expect = 5.5e-21, Sum P(2) = 5.5e-21
 Identities = 21/52 (40%), Positives = 31/52 (59%)

Query:   747 LEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
             L + LRR+T  E L    K KC  C SY+++ K+LT+ + P +    LKRF+
Sbjct:   362 LTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 413


>RGD|1310354 [details] [associations]
            symbol:Usp22 "ubiquitin specific peptidase 22" species:10116
            "Rattus norvegicus" [GO:0000124 "SAGA complex" evidence=IEA;ISO]
            [GO:0003713 "transcription coactivator activity" evidence=ISO]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0004843 "ubiquitin-specific protease activity"
            evidence=IEA;ISO] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0010485 "H4 histone acetyltransferase activity"
            evidence=IEA;ISO] [GO:0016574 "histone ubiquitination"
            evidence=IEA;ISO] [GO:0016578 "histone deubiquitination"
            evidence=IEA;ISO] [GO:0016579 "protein deubiquitination"
            evidence=ISO] [GO:0030374 "ligand-dependent nuclear receptor
            transcription coactivator activity" evidence=IEA;ISO] [GO:0043967
            "histone H4 acetylation" evidence=ISO] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=IEA;ISO]
            [GO:0045931 "positive regulation of mitotic cell cycle"
            evidence=IEA;ISO] [GO:0070461 "SAGA-type complex" evidence=ISO]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS50271 RGD:1310354 GO:GO:0045893
            GO:GO:0046872 GO:GO:0045931 GO:GO:0008270 GO:GO:0000124
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0030374
            GO:GO:0016578 GO:GO:0004843 GO:GO:0004221 GO:GO:0016574
            GO:GO:0010485 KO:K11366 GeneTree:ENSGT00690000101718 CTD:23326
            OrthoDB:EOG48PMJS OMA:IHEHAKA IPI:IPI00369544 RefSeq:NP_001178573.1
            UniGene:Rn.230625 Ensembl:ENSRNOT00000050061 GeneID:303201
            KEGG:rno:303201 UCSC:RGD:1310354 NextBio:650853 Uniprot:D3ZTX7
        Length = 525

 Score = 221 (82.9 bits), Expect = 5.5e-21, Sum P(2) = 5.5e-21
 Identities = 51/158 (32%), Positives = 78/158 (49%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDG-K 645
             GLIN GN+C+ N ++Q L  TP L  +FL   H  E      C  CE+ +L      G +
Sbjct:   177 GLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCEMQSPSSCLVCEMSSLFQEFYSGHR 236

Query:   646 SPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCI-EEAGVNASGPLEDETT 704
             SP  P  +L  + +    L    ++DAHEFL  A+D +   C  ++ G  A+ P      
Sbjct:   237 SPHIPYKLLHLVWTHARHLAGYEQQDAHEFLIAALDVLHRHCKGDDNGKKANNP-NHCNC 295

Query:   705 LIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEG 742
             +I   F G L+S + C  CHG S   +   D+++++ G
Sbjct:   296 IIDQIFTGGLQSDVTCQVCHGVSTTIDPFWDISLDLPG 333

 Score = 104 (41.7 bits), Expect = 5.5e-21, Sum P(2) = 5.5e-21
 Identities = 21/52 (40%), Positives = 31/52 (59%)

Query:   747 LEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
             L + LRR+T  E L    K KC  C SY+++ K+LT+ + P +    LKRF+
Sbjct:   362 LTDCLRRFTRPEHLGSSAKIKCSGCHSYQESTKQLTMKKLPIVACFHLKRFE 413


>UNIPROTKB|B4MLR8 [details] [associations]
            symbol:Usp36 "Ubiquitin carboxyl-terminal hydrolase 36"
            species:7260 "Drosophila willistoni" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0005730 "nucleolus"
            evidence=ISS] [GO:0016579 "protein deubiquitination" evidence=ISS]
            [GO:0030718 "germ-line stem cell maintenance" evidence=ISS]
            [GO:0035019 "somatic stem cell maintenance" evidence=ISS]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005730 GO:GO:0008234
            GO:GO:0006511 GO:GO:0035019 GO:GO:0030718 GO:GO:0016579
            GO:GO:0004221 eggNOG:COG5533 EMBL:CH963847 KO:K11855 OMA:PYESASE
            OrthoDB:EOG4VMCZ7 RefSeq:XP_002062008.1 EnsemblMetazoa:FBtr0247950
            GeneID:6638806 KEGG:dwi:Dwil_GK17299 FlyBase:FBgn0219298
            InParanoid:B4MLR8 Uniprot:B4MLR8
        Length = 1311

 Score = 276 (102.2 bits), Expect = 3.5e-20, P = 3.5e-20
 Identities = 72/230 (31%), Positives = 107/230 (46%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYF-LQGLHSKECA---------------KKDWCF 630
             G+IN GN+CY N  LQ L   P L  +   +  H + C                   +C 
Sbjct:   213 GMINVGNTCYLNSTLQALFHIPALANWLNSEQSHLENCNIGGESGGGGGGGGGNNGGFCI 272

Query:   631 TCELENLILRAKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEE 690
              C +   +   +   S + P  I S+L+ I   +  GR+EDAHEFLR+ ++ M+   +  
Sbjct:   273 ICAMAKTLQSTQSNASAIRPYHIYSKLKQICKHMVIGRQEDAHEFLRFLVEAMEKAYLMR 332

Query:   691 -AGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEE 749
                      L  ETT +   FGGYLRS+++C  C+  S   +   DL ++I      L+E
Sbjct:   333 YRNYKELDQLVKETTPLNQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKS-DTLDE 391

Query:   750 ALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQV 799
             A   Y   E L+ +  YKC+ CK    A K+ ++  AP  L I LKRF +
Sbjct:   392 AFDGYFSRERLE-DMGYKCEGCKKKVSATKQFSLQRAPITLCIQLKRFSM 440


>UNIPROTKB|B4HUI5 [details] [associations]
            symbol:Usp36 "Ubiquitin carboxyl-terminal hydrolase 36"
            species:7238 "Drosophila sechellia" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0005730 "nucleolus"
            evidence=ISS] [GO:0016579 "protein deubiquitination" evidence=ISS]
            [GO:0030718 "germ-line stem cell maintenance" evidence=ISS]
            [GO:0035019 "somatic stem cell maintenance" evidence=ISS]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005730 GO:GO:0008234
            GO:GO:0006511 GO:GO:0035019 GO:GO:0030718 GO:GO:0016579
            GO:GO:0004221 EMBL:CH480817 KO:K11855 OrthoDB:EOG4WM38P
            RefSeq:XP_002035470.1 EnsemblMetazoa:FBtr0197704 GeneID:6610913
            KEGG:dse:Dsec_GM14719 FlyBase:FBgn0169640 Uniprot:B4HUI5
        Length = 1059

 Score = 274 (101.5 bits), Expect = 4.2e-20, P = 4.2e-20
 Identities = 65/198 (32%), Positives = 102/198 (51%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFL-QGLHSKECAKKD---WCFTCELENLILRAK 642
             G+IN GN+CY N  LQ L   P L  + + +  H  +C   +    C  C +   +L  +
Sbjct:   169 GMINVGNTCYLNSTLQALLHIPALANWLVSEQAHLADCNVAEPGSGCIICAMAKTLLATQ 228

Query:   643 DGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEE-AGVNASGPLED 701
               +S + P  I S+L+ I   +  GR+EDAHEFLR+ ++ M+   +           L  
Sbjct:   229 SNQSAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFRNYKELDQLVK 288

Query:   702 ETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILD 761
             ETT +G  FGGYLRS+++C  C+  S   +   DL ++I     +LE+A   +   E L+
Sbjct:   289 ETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIR-KADSLEDAFEGHFSRERLE 347

Query:   762 GENKYKCDRCKSYEKAKK 779
              +  YKC+ CK  +K K+
Sbjct:   348 -DMGYKCEGCK--KKLKR 362


>RGD|1562211 [details] [associations]
            symbol:Usp51 "ubiquitin specific peptidase 51" species:10116
            "Rattus norvegicus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 RGD:1562211
            GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221 KO:K11366
            GeneTree:ENSGT00690000101718 OrthoDB:EOG48PMJS CTD:158880
            EMBL:CH474063 IPI:IPI00561109 RefSeq:NP_001101722.1
            UniGene:Rn.56303 Ensembl:ENSRNOT00000029397 GeneID:317398
            KEGG:rno:317398 UCSC:RGD:1562211 NextBio:671739 Uniprot:D3ZUR6
        Length = 696

 Score = 275 (101.9 bits), Expect = 5.0e-20, Sum P(2) = 5.0e-20
 Identities = 69/227 (30%), Positives = 108/227 (47%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDG-K 645
             GLIN GN+C+ N ++Q L   P L  +FL   H         C  CE+ +L      G +
Sbjct:   361 GLINLGNTCFMNCIVQALTRIPLLKEFFLSDKHKCMMTSPSLCLVCEMSSLFQAMYSGNQ 420

Query:   646 SPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTL 705
             SP  P  +L  +      L   R++DAHEFL   +D +     ++ G+   G L     +
Sbjct:   421 SPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLHRHSRDD-GIEQEGNLNHCNCI 479

Query:   706 IGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIE--------GDIG------NLEEAL 751
             I   F G L+S + C  CHG S   +   D+++++         G  G      +L + L
Sbjct:   480 IDYIFTGGLQSDVTCQVCHGVSTTIDPCWDISLDLPVSYTPGRAGSTGQKPRVISLTDCL 539

Query:   752 RRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
             + +T  E L    K KC RC+SY+++ K+LT+ + P +    LKRF+
Sbjct:   540 KWFTRPEDLGSSAKIKCSRCQSYQQSTKQLTMKKLPIVACFHLKRFE 586

 Score = 42 (19.8 bits), Expect = 5.0e-20, Sum P(2) = 5.0e-20
 Identities = 9/18 (50%), Positives = 10/18 (55%)

Query:   287 PGCSGDLQCTPANSLGLG 304
             PGCSGD   T    L +G
Sbjct:   166 PGCSGDSDGTENRLLEVG 183


>UNIPROTKB|K7ELR5 [details] [associations]
            symbol:USP36 "Ubiquitin carboxyl-terminal hydrolase 36"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS50235
            EMBL:AC022966 HGNC:HGNC:20062 Ensembl:ENST00000589424
            Uniprot:K7ELR5
        Length = 234

 Score = 242 (90.2 bits), Expect = 1.7e-19, P = 1.7e-19
 Identities = 43/112 (38%), Positives = 64/112 (57%)

Query:   578 WNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENL 637
             W +V     GL N GN+C+ N  +QCL +TPPL  Y L   H++ C +  +C  C ++N 
Sbjct:   114 WERVFRVGAGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNH 173

Query:   638 ILRA-KDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCI 688
             I++A  +  + + P+  +  L+ I      G +EDAHEFLRY ID MQ  C+
Sbjct:   174 IVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACL 225


>UNIPROTKB|Q8IXW9 [details] [associations]
            symbol:USP36 "Ubiquitin carboxyl-terminal hydrolase 36"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS50235
            GO:GO:0006511 GO:GO:0004221 EMBL:AC022966 HOGENOM:HOG000070037
            UniGene:Hs.464243 HGNC:HGNC:20062 EMBL:BC038983 IPI:IPI00383547
            ProteinModelPortal:Q8IXW9 SMR:Q8IXW9 STRING:Q8IXW9
            Ensembl:ENST00000590546 UCSC:uc002jwd.1 Bgee:Q8IXW9 Uniprot:Q8IXW9
        Length = 285

 Score = 242 (90.2 bits), Expect = 1.7e-19, P = 1.7e-19
 Identities = 43/112 (38%), Positives = 64/112 (57%)

Query:   578 WNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENL 637
             W +V     GL N GN+C+ N  +QCL +TPPL  Y L   H++ C +  +C  C ++N 
Sbjct:   114 WERVFRVGAGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNH 173

Query:   638 ILRA-KDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCI 688
             I++A  +  + + P+  +  L+ I      G +EDAHEFLRY ID MQ  C+
Sbjct:   174 IVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACL 225


>UNIPROTKB|E5RJP3 [details] [associations]
            symbol:USP42 "Ubiquitin carboxyl-terminal hydrolase 42"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0016579 "protein
            deubiquitination" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS50235
            GO:GO:0006511 GO:GO:0016579 GO:GO:0004221 EMBL:AC004895
            HGNC:HGNC:20068 IPI:IPI01012580 SMR:E5RJP3 Ensembl:ENST00000521713
            Uniprot:E5RJP3
        Length = 219

 Score = 235 (87.8 bits), Expect = 9.8e-19, P = 9.8e-19
 Identities = 42/112 (37%), Positives = 62/112 (55%)

Query:   578 WNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENL 637
             W +      GL N GN+C+AN  LQCL +TPPL  Y L   HSK C  + +C  C ++  
Sbjct:   103 WQQTHRVGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAH 162

Query:   638 ILRAKDGKSP-LSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCI 688
             I +A       + P+ +++ ++ I      G +EDAHEFL+Y +D MQ  C+
Sbjct:   163 ITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL 214


>TAIR|locus:2140074 [details] [associations]
            symbol:UBP3 "ubiquitin-specific protease 3" species:3702
            "Arabidopsis thaliana" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=ISS;IDA] [GO:0005737 "cytoplasm" evidence=ISM]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0006007 "glucose catabolic process" evidence=RCA]
            [GO:0006499 "N-terminal protein myristoylation" evidence=RCA]
            [GO:0007165 "signal transduction" evidence=RCA] [GO:0009755
            "hormone-mediated signaling pathway" evidence=RCA] [GO:0005634
            "nucleus" evidence=IDA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0008234
            GO:GO:0006511 EMBL:AL161596 EMBL:AL035708 GO:GO:0004221
            eggNOG:COG5533 KO:K11842 HOGENOM:HOG000231498 EMBL:U76845
            EMBL:AY058889 EMBL:AY079044 IPI:IPI00529126 PIR:T06097
            RefSeq:NP_568074.1 UniGene:At.24733 ProteinModelPortal:O24454
            SMR:O24454 STRING:O24454 MEROPS:C19.008 PaxDb:O24454 PRIDE:O24454
            EnsemblPlants:AT4G39910.1 GeneID:830150 KEGG:ath:AT4G39910
            GeneFarm:4911 TAIR:At4g39910 InParanoid:O24454 OMA:TEPTWVH
            PhylomeDB:O24454 ProtClustDB:CLSN2688340 Genevestigator:O24454
            GermOnline:AT4G39910 Uniprot:O24454
        Length = 371

 Score = 177 (67.4 bits), Expect = 8.8e-18, Sum P(2) = 8.8e-18
 Identities = 37/111 (33%), Positives = 66/111 (59%)

Query:   695 ASGPLEDE--TTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALR 752
             A+G +  E   T +   F G L ++ +C +C   + R E  +DL+++IE +  ++   L+
Sbjct:   159 ANGVVHKEPIVTWVHNIFQGILTNETRCLRCETVTARDETFLDLSLDIEQN-SSITSCLK 217

Query:   753 RYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFSPL 803
              ++ TE L  E+K+ CD+C S ++A+K++ I + P+IL I LKRF+    L
Sbjct:   218 NFSSTETLHAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHLKRFKYIEQL 268

 Score = 114 (45.2 bits), Expect = 8.8e-18, Sum P(2) = 8.8e-18
 Identities = 34/109 (31%), Positives = 51/109 (46%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHS-KECAK-KDWCFTC--ELENLILRAK 642
             G  N GN+CY N VLQ L F  P     L+   S K  A  ++   TC  +L + I   K
Sbjct:    24 GFENFGNTCYCNSVLQALYFCVPFREQLLEYYTSNKSVADAEENLMTCLADLFSQISSQK 83

Query:   643 DGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEA 691
                  ++P   + RL+       +   +DAHEFL Y ++ +  +  +EA
Sbjct:    84 KKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLNEVVDILEKEA 132


>RGD|1304979 [details] [associations]
            symbol:Usp8 "ubiquitin specific peptidase 8" species:10116
            "Rattus norvegicus" [GO:0000281 "cytokinesis after mitosis"
            evidence=ISO] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISO] [GO:0005622 "intracellular" evidence=ISO] [GO:0005737
            "cytoplasm" evidence=ISO] [GO:0005769 "early endosome"
            evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0007032 "endosome organization" evidence=ISO] [GO:0007265 "Ras
            protein signal transduction" evidence=ISO] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0016579
            "protein deubiquitination" evidence=ISO] [GO:0019897 "extrinsic to
            plasma membrane" evidence=ISO] [GO:0030496 "midbody" evidence=ISO]
            [GO:0031313 "extrinsic to endosome membrane" evidence=ISO]
            [GO:0070536 "protein K63-linked deubiquitination" evidence=ISO]
            [GO:0071108 "protein K48-linked deubiquitination" evidence=ISO]
            [GO:0001669 "acrosomal vesicle" evidence=ISO] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 RGD:1304979 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 IPI:IPI00782723 Ensembl:ENSRNOT00000057174
            UCSC:RGD:1304979 ArrayExpress:D4A7S5 Uniprot:D4A7S5
        Length = 416

 Score = 235 (87.8 bits), Expect = 9.5e-17, P = 9.5e-17
 Identities = 61/218 (27%), Positives = 106/218 (48%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAK-DGK 645
             GL N GN+CY N +LQCL   P L  YF +  +  +  +  +    E   +I++A   G+
Sbjct:    96 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRDVFSEVAEEFGIIMKALWTGQ 155

Query:   646 SP-LSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTM-QSVCIEEAGVNASG---PLE 700
                +SP      +  I  Q     ++D+ E L + +D + + +     G   +G   PL+
Sbjct:   156 YRYISPKDFKVTIGKINDQFAGSSQQDSQELLLFLMDGLHEDLNKVRVGHTRTGHQIPLQ 215

Query:   701 DETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIG-NLEEALRRYTGTEI 759
               + ++ L F G  +S ++C  CH KS   E  M L++ +       L++ LR ++  E 
Sbjct:   216 MVSIIVAL-FQGQFKSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEK 274

Query:   760 LDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             L   N++ C  C++   + KK+ I + P +L + LKRF
Sbjct:   275 LTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRF 312


>UNIPROTKB|F1RTR5 [details] [associations]
            symbol:LOC100519179 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
            GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0004221 KO:K11366 GeneTree:ENSGT00690000101718
            OMA:FISFPLE EMBL:FP017286 RefSeq:XP_003135158.1 UniGene:Ssc.94644
            Ensembl:ENSSSCT00000013504 GeneID:100519179 KEGG:ssc:100519179
            Uniprot:F1RTR5
        Length = 710

 Score = 192 (72.6 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
 Identities = 48/158 (30%), Positives = 74/158 (46%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDG-K 645
             GLIN GN+C+ N ++Q L   P L  +FL   H         C  CE+ +L      G +
Sbjct:   363 GLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIMTSPSLCLVCEMSSLFHAMYSGNR 422

Query:   646 SPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEA-GVNASGPLEDETT 704
             +P  P  +L  +      L   R++DAHEFL   +D +     E++ G  AS P      
Sbjct:   423 TPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLHRHSKEDSVGQEASNP-NCCNC 481

Query:   705 LIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEG 742
             +I   F G L+S + C  CH  S   +   D+++++ G
Sbjct:   482 IIDHIFTGGLQSDVTCQVCHTVSTTIDPCWDISLDLPG 519

 Score = 97 (39.2 bits), Expect = 1.5e-16, Sum P(2) = 1.5e-16
 Identities = 22/71 (30%), Positives = 39/71 (54%)

Query:   728 ERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAP 787
             ER +  +     I G+  +L + L+ +T  E L    K KC  C+SY+++ K+LT+ + P
Sbjct:   530 ERADGTVSRDERIPGN-PSLTDCLQWFTRREHLGSSAKIKCSSCQSYQESTKQLTMKKLP 588

Query:   788 NILTIALKRFQ 798
              +    +KRF+
Sbjct:   589 IVACFHIKRFE 599


>UNIPROTKB|Q70EK9 [details] [associations]
            symbol:USP51 "Ubiquitin carboxyl-terminal hydrolase 51"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
            GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0004221 KO:K11366 HOGENOM:HOG000007260
            HOVERGEN:HBG058014 OrthoDB:EOG48PMJS EMBL:AJ583823 EMBL:AL732358
            EMBL:BC035907 EMBL:BN000340 IPI:IPI00398738 RefSeq:NP_958443.1
            UniGene:Hs.40061 UniGene:Hs.607524 ProteinModelPortal:Q70EK9
            SMR:Q70EK9 MEROPS:C19.065 PhosphoSite:Q70EK9 DMDM:52000873
            PRIDE:Q70EK9 DNASU:158880 Ensembl:ENST00000500968 GeneID:158880
            KEGG:hsa:158880 UCSC:uc004dun.2 CTD:158880 GeneCards:GC0XM055511
            HGNC:HGNC:23086 HPA:HPA001942 neXtProt:NX_Q70EK9
            PharmGKB:PA134888611 InParanoid:Q70EK9 OMA:FISFPLE PhylomeDB:Q70EK9
            GenomeRNAi:158880 NextBio:87839 Bgee:Q70EK9 CleanEx:HS_USP51
            Genevestigator:Q70EK9 GermOnline:ENSG00000185295 Uniprot:Q70EK9
        Length = 711

 Score = 191 (72.3 bits), Expect = 2.0e-16, Sum P(3) = 2.0e-16
 Identities = 44/163 (26%), Positives = 73/163 (44%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDG-K 645
             GLIN GN+C+ N ++Q L   P L  +FL   H         C  CE+ +L      G +
Sbjct:   364 GLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIMTSPSLCLVCEMSSLFHAMYSGSR 423

Query:   646 SPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTL 705
             +P  P  +L  +      L   R++DAHEFL   +D +     +++G   +        +
Sbjct:   424 TPHIPYKLLHLIWIHAEHLAGYRQQDAHEFLIAILDVLHRHSKDDSGGQEANNPNCCNCI 483

Query:   706 IGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLE 748
             I   F G L+S + C  CH  S   +   D+++++ G     +
Sbjct:   484 IDQIFTGGLQSDVTCQACHSVSTTIDPCWDISLDLPGSCATFD 526

 Score = 103 (41.3 bits), Expect = 2.0e-16, Sum P(3) = 2.0e-16
 Identities = 24/71 (33%), Positives = 40/71 (56%)

Query:   728 ERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAP 787
             ER +  +     I G I +L + L+ +T  E L    K KC+ C+SY+++ K+LT+ + P
Sbjct:   531 ERADSTVSRDDHIPG-IPSLTDCLQWFTRPEHLGSSAKIKCNSCQSYQESTKQLTMKKLP 589

Query:   788 NILTIALKRFQ 798
              +    LKRF+
Sbjct:   590 IVACFHLKRFE 600

 Score = 37 (18.1 bits), Expect = 2.0e-16, Sum P(3) = 2.0e-16
 Identities = 9/21 (42%), Positives = 13/21 (61%)

Query:   284 ETKPGCSGDLQCTPANSLGLG 304
             +T+  CSGDL  +  +  GLG
Sbjct:   161 QTRRSCSGDLDGS-GDPGGLG 180


>UNIPROTKB|F1MTL6 [details] [associations]
            symbol:USP27X "Ubiquitin carboxyl-terminal hydrolase"
            species:9913 "Bos taurus" [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 KO:K11366
            GeneTree:ENSGT00690000101718 CTD:389856 EMBL:DAAA02073086
            IPI:IPI00921773 RefSeq:NP_001138547.1 UniGene:Bt.88841
            Ensembl:ENSBTAT00000056161 GeneID:781718 KEGG:bta:781718
            OMA:YQCFVWC NextBio:20924995 Uniprot:F1MTL6
        Length = 438

 Score = 232 (86.7 bits), Expect = 2.5e-16, P = 2.5e-16
 Identities = 54/158 (34%), Positives = 79/158 (50%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGK- 645
             GLIN GN+C+ N ++Q L  TP L  +FL   H  E    + C  CE+ +L      G  
Sbjct:    79 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMPSPELCLVCEMSSLFRELYSGNP 138

Query:   646 SPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCI-EEAGVNASGPLEDETT 704
             SP  P  +L  +      L   R++DAHEFL  A+D +   C  ++AG  AS P      
Sbjct:   139 SPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDAGKAASNP-NHCNC 197

Query:   705 LIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEG 742
             +I   F G L+S + C  CHG S   +   D+++++ G
Sbjct:   198 IIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPG 235


>UNIPROTKB|K7EMM6 [details] [associations]
            symbol:USP36 "Ubiquitin carboxyl-terminal hydrolase 36"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00973 PROSITE:PS50235
            EMBL:AC022966 HGNC:HGNC:20062 Ensembl:ENST00000586066
            Uniprot:K7EMM6
        Length = 259

 Score = 211 (79.3 bits), Expect = 3.7e-16, P = 3.7e-16
 Identities = 41/99 (41%), Positives = 59/99 (59%)

Query:   703 TTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDG 762
             TTL+   FGGYLRS++KC+ C   S+  +  +D+ +EI     N+  AL  +   ++L G
Sbjct:    28 TTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIR-QAANIVRALELFVKADVLSG 86

Query:   763 ENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFS 801
             EN Y C +CK    A K+ TI    N+LT++LKRF  FS
Sbjct:    87 ENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFS 125


>FB|FBgn0013717 [details] [associations]
            symbol:not "non-stop" species:7227 "Drosophila melanogaster"
            [GO:0007412 "axon target recognition" evidence=IMP] [GO:0021782
            "glial cell development" evidence=IMP] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IGI]
            [GO:0004843 "ubiquitin-specific protease activity" evidence=ISS]
            [GO:0008347 "glial cell migration" evidence=IMP] [GO:0016579
            "protein deubiquitination" evidence=IMP] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0006325 "chromatin organization"
            evidence=IMP] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IMP] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0000124 "SAGA complex" evidence=IDA] [GO:0016578
            "histone deubiquitination" evidence=IMP] [GO:0007411 "axon
            guidance" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR015880
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00355
            GO:GO:0007411 GO:GO:0045893 EMBL:AE014296 GO:GO:0046872
            GO:GO:0008270 GO:GO:0008234 GO:GO:0006351 GO:GO:0000124
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0008347
            GO:GO:0016578 GO:GO:0004221 GO:GO:0007412 eggNOG:COG5533
            GO:GO:0021782 EMBL:AF179590 EMBL:AY058707 RefSeq:NP_524140.2
            UniGene:Dm.2731 HSSP:P54578 ProteinModelPortal:Q9VVR1 SMR:Q9VVR1
            IntAct:Q9VVR1 MINT:MINT-6179419 STRING:Q9VVR1 MEROPS:C19.095
            PaxDb:Q9VVR1 PRIDE:Q9VVR1 GeneID:40030 KEGG:dme:Dmel_CG4166
            UCSC:CG4166-RB CTD:40030 FlyBase:FBgn0013717 InParanoid:Q9U6Q9
            KO:K11366 OrthoDB:EOG4M37QR GenomeRNAi:40030 NextBio:816633
            Bgee:Q9VVR1 Uniprot:Q9VVR1
        Length = 735

 Score = 156 (60.0 bits), Expect = 5.6e-16, Sum P(4) = 5.6e-16
 Identities = 38/119 (31%), Positives = 59/119 (49%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDW--CFTCELENLILRAKDG 644
             GL+N G +C+ N ++Q L  TP L+ YF+   H  +C  K    C  CE+  L      G
Sbjct:   398 GLLNLGATCFMNCIVQALVHTPLLSDYFMSDRH--DCGSKSSHKCLVCEVSRLFQEFYSG 455

Query:   645 -KSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIE-----EAGVNASG 697
              +SPLS   +L  + +    L    ++DAHEF    +D +   C++     E+  N+SG
Sbjct:   456 SRSPLSLHRLLHLIWNHAKHLAGYEQQDAHEFFIATLDVLHRHCVKAKAEHESKSNSSG 514

 Score = 139 (54.0 bits), Expect = 5.6e-16, Sum P(4) = 5.6e-16
 Identities = 31/101 (30%), Positives = 54/101 (53%)

Query:   705 LIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEI-----EGDIG--NLEEALRRYTGT 757
             +I   F G L+S + C  C+G S   +   D+++++      G +    L + L RYT  
Sbjct:   536 IIDQIFTGMLQSDVVCQACNGVSTTYDPFWDISLDLGETTTHGGVTPKTLIDCLERYTRA 595

Query:   758 EILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
             E L    K KC  CKSY+++ K+ ++   P++++  LKRF+
Sbjct:   596 EHLGSAAKIKCSTCKSYQESTKQFSLRTLPSVVSFHLKRFE 636

 Score = 39 (18.8 bits), Expect = 0.00020, Sum P(3) = 0.00020
 Identities = 9/21 (42%), Positives = 13/21 (61%)

Query:   543 GSKSSKQCLSVGCETAGRYSD 563
             GSKSS +CL   CE +  + +
Sbjct:   433 GSKSSHKCLV--CEVSRLFQE 451

 Score = 38 (18.4 bits), Expect = 5.6e-16, Sum P(4) = 5.6e-16
 Identities = 11/40 (27%), Positives = 18/40 (45%)

Query:    62 GYSTTVYVPQHPQCAVCFSPTTTRCARCKA-VRYCSGKCQ 100
             G++ +  +P H +  VC       C +C+   R  S K Q
Sbjct:    22 GHTDSCLLPTHMRACVCV------CVQCEIETRKASEKSQ 55

 Score = 37 (18.1 bits), Expect = 5.6e-16, Sum P(4) = 5.6e-16
 Identities = 11/51 (21%), Positives = 23/51 (45%)

Query:   543 GSKSSKQCLSVGCETAGRYSDKGLFSYELFVKLYNWNKVELQPCGLINCGN 593
             GS +S Q  +    ++   S+ G   Y+ +VK ++++   +       C N
Sbjct:   222 GSDASAQANASADASSAVMSETGCRHYQSYVKEHSYDTFRVIDAYFAACVN 272


>DICTYBASE|DDB_G0290453 [details] [associations]
            symbol:usp12 "putative ubiquitin carboxyl-terminal
            hydrolase (UCH)" species:44689 "Dictyostelium discoideum"
            [GO:0030587 "sorocarp development" evidence=IMP] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0008233
            "peptidase activity" evidence=IEA] [GO:0006508 "proteolysis"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            dictyBase:DDB_G0290453 GO:GO:0008234 GenomeReviews:CM000154_GR
            GO:GO:0030587 GO:GO:0006511 GO:GO:0004221 EMBL:AAFI02000163
            eggNOG:COG5533 KO:K11842 RefSeq:XP_635735.2
            ProteinModelPortal:Q54G37 EnsemblProtists:DDB0237694 GeneID:8627653
            KEGG:ddi:DDB_G0290453 OMA:HHIDIRE ProtClustDB:CLSZ2734177
            Uniprot:Q54G37
        Length = 475

 Score = 204 (76.9 bits), Expect = 6.1e-16, Sum P(2) = 6.1e-16
 Identities = 51/170 (30%), Positives = 87/170 (51%)

Query:   633 ELENLILRAKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDT----MQSVCI 688
             EL   I + K+    L P   + RL+       +   +DAHEFL + +++    +Q    
Sbjct:   194 ELFYTIHQNKETHGCLKPETFVERLKKENELFSSFMHQDAHEFLNFLLNSIAEFLQKQQK 253

Query:   689 EEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLE 748
              +    +S   E   TL+   F G L ++ KC  C   + + E  +DL+++IE +  +L 
Sbjct:   254 NKQPQQSSEKKECNKTLVHEIFEGTLTNETKCLTCESITNKDESFLDLSIDIEQN-KSLT 312

Query:   749 EALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
               L  ++  EIL   +K+ CD+C S ++A+K++ I + PN L I LKRF+
Sbjct:   313 NCLSNFSSIEILSKNDKFFCDQCNSLQEAQKRMKIKKLPNTLIIHLKRFK 362

 Score = 72 (30.4 bits), Expect = 6.1e-16, Sum P(2) = 6.1e-16
 Identities = 16/30 (53%), Positives = 17/30 (56%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQ 616
             GL N GN+CY N VLQ L F  P     LQ
Sbjct:    28 GLENFGNTCYCNSVLQVLYFCVPFRNKILQ 57


>UNIPROTKB|F1PHD5 [details] [associations]
            symbol:USP51 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
            GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0004221 GeneTree:ENSGT00690000101718
            EMBL:AAEX03026345 OMA:YQCFVWC Ensembl:ENSCAFT00000025289
            Uniprot:F1PHD5
        Length = 514

 Score = 229 (85.7 bits), Expect = 8.8e-16, P = 8.8e-16
 Identities = 53/158 (33%), Positives = 79/158 (50%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGK- 645
             GLIN GN+C+ N ++Q L  TP L  +FL   H  E    + C  CE+ +L      G  
Sbjct:   156 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMPSPELCLVCEMSSLFRELYSGNP 215

Query:   646 SPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCI-EEAGVNASGPLEDETT 704
             SP  P  +L  +      L   R++DAHEFL  A+D +   C  ++AG  A+ P      
Sbjct:   216 SPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDAGKAANNP-NHCNC 274

Query:   705 LIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEG 742
             +I   F G L+S + C  CHG S   +   D+++++ G
Sbjct:   275 IIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPG 312


>UNIPROTKB|F1RW22 [details] [associations]
            symbol:LOC100515460 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
            GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0004221 GeneTree:ENSGT00690000101718
            OMA:YQCFVWC EMBL:FP085546 Ensembl:ENSSSCT00000013455 Uniprot:F1RW22
        Length = 523

 Score = 229 (85.7 bits), Expect = 9.2e-16, P = 9.2e-16
 Identities = 53/158 (33%), Positives = 79/158 (50%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGK- 645
             GLIN GN+C+ N ++Q L  TP L  +FL   H  E    + C  CE+ +L      G  
Sbjct:   176 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMPSPELCLVCEMSSLFRELYSGNP 235

Query:   646 SPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCI-EEAGVNASGPLEDETT 704
             SP  P  +L  +      L   R++DAHEFL  A+D +   C  ++AG  A+ P      
Sbjct:   236 SPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDAGKAANNP-NHCNC 294

Query:   705 LIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEG 742
             +I   F G L+S + C  CHG S   +   D+++++ G
Sbjct:   295 IIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPG 332


>MGI|MGI:1859645 [details] [associations]
            symbol:Usp27x "ubiquitin specific peptidase 27, X
            chromosome" species:10090 "Mus musculus" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0005575
            "cellular_component" evidence=ND] [GO:0006508 "proteolysis"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0008233 "peptidase activity"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 MGI:MGI:1859645 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 eggNOG:COG5533 HSSP:P54578 KO:K11366
            GeneTree:ENSGT00690000101718 HOVERGEN:HBG058014 CTD:389856
            EMBL:AF229643 EMBL:AK028249 EMBL:AK030383 EMBL:AL663104
            IPI:IPI00224850 RefSeq:NP_062334.2 UniGene:Mm.483107
            UniGene:Mm.488988 ProteinModelPortal:Q8CEG8 SMR:Q8CEG8
            PhosphoSite:Q8CEG8 PRIDE:Q8CEG8 Ensembl:ENSMUST00000115744
            Ensembl:ENSMUST00000178293 GeneID:54651 KEGG:mmu:54651
            InParanoid:Q9JIG5 OrthoDB:EOG4VT5X3 NextBio:311508 Bgee:Q8CEG8
            Genevestigator:Q8CEG8 Uniprot:Q8CEG8
        Length = 438

 Score = 227 (85.0 bits), Expect = 9.3e-16, P = 9.3e-16
 Identities = 53/158 (33%), Positives = 78/158 (49%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGK- 645
             GLIN GN+C+ N ++Q L  TP L  +FL   H  E    + C  CE+ +L      G  
Sbjct:    79 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMPSPELCLVCEMSSLFRELYSGNP 138

Query:   646 SPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCI-EEAGVNASGPLEDETT 704
             SP  P  +L  +      L   R++DAHEFL  A+D +   C  ++ G  AS P      
Sbjct:   139 SPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKVASNP-NHCNC 197

Query:   705 LIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEG 742
             +I   F G L+S + C  CHG S   +   D+++++ G
Sbjct:   198 IIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPG 235


>RGD|1564628 [details] [associations]
            symbol:Usp27x "ubiquitin specific peptidase 27, X-linked"
            species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 RGD:1564628 GO:GO:0008234
            GO:GO:0006511 GO:GO:0004221 GeneTree:ENSGT00690000101718
            OrthoDB:EOG4VT5X3 IPI:IPI00362588 Ensembl:ENSRNOT00000003800
            Uniprot:D3ZGB0
        Length = 438

 Score = 227 (85.0 bits), Expect = 9.3e-16, P = 9.3e-16
 Identities = 53/158 (33%), Positives = 78/158 (49%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGK- 645
             GLIN GN+C+ N ++Q L  TP L  +FL   H  E    + C  CE+ +L      G  
Sbjct:    79 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMPSPELCLVCEMSSLFRELYSGNP 138

Query:   646 SPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCI-EEAGVNASGPLEDETT 704
             SP  P  +L  +      L   R++DAHEFL  A+D +   C  ++ G  AS P      
Sbjct:   139 SPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKVASNP-NHCNC 197

Query:   705 LIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEG 742
             +I   F G L+S + C  CHG S   +   D+++++ G
Sbjct:   198 IIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPG 235


>UNIPROTKB|D6RBM5 [details] [associations]
            symbol:USP17L23 "Putative ubiquitin carboxyl-terminal
            hydrolase 17-like protein 23" species:9606 "Homo sapiens"
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005783
            "endoplasmic reticulum" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS50235
            GO:GO:0006511 GO:GO:0004221 OrthoDB:EOG42V8G0 EMBL:AC108519
            IPI:IPI00967254 ProteinModelPortal:D6RBM5 SMR:D6RBM5
            Ensembl:ENST00000506619 GeneCards:GC04P009274 HGNC:HGNC:44451
            HOGENOM:HOG000070037 Uniprot:D6RBM5
        Length = 183

 Score = 206 (77.6 bits), Expect = 1.3e-15, P = 1.3e-15
 Identities = 39/102 (38%), Positives = 57/102 (55%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGKS 646
             GL N GN+CY N  LQCL +TPPL  Y L   HS+ C +   C  C ++  I RA     
Sbjct:    81 GLQNMGNTCYVNASLQCLTYTPPLANYMLSREHSQTCHRHKGCMLCTMQAHITRALH--- 137

Query:   647 PLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCI 688
               +P  ++   Q++ +    G++EDAHEFL + +D M+  C+
Sbjct:   138 --NPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMEKACL 177


>UNIPROTKB|I3LKE8 [details] [associations]
            symbol:LOC100626328 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 KO:K11845
            OMA:DGENAYH GeneTree:ENSGT00670000097591 EMBL:FP476116
            RefSeq:XP_003359505.1 Ensembl:ENSSSCT00000024208 GeneID:100626328
            KEGG:ssc:100626328 Uniprot:I3LKE8
        Length = 517

 Score = 227 (85.0 bits), Expect = 1.5e-15, P = 1.5e-15
 Identities = 59/159 (37%), Positives = 86/159 (54%)

Query:   639 LRAKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGP 698
             +RA   ++ L P  ++   + + +     R+EDAHEFL +A+D MQ  C          P
Sbjct:   128 VRAHVTRALLHPGDVIQPRKDLVASFHRHRQEDAHEFLMFALDAMQR-C----------P 176

Query:   699 LEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTE 758
              ED  TLI   FGG  RS+I+C +C G S+  +  +D+T++I     ++E+ALR     E
Sbjct:   177 SED--TLIQQIFGGCWRSQIQCLRCLGVSDTFDPYLDVTLDITA-AQSVEQALRELVKAE 233

Query:   759 ILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
              LDGEN Y C  C     A K+LT+  A  +L + LKRF
Sbjct:   234 KLDGENAYHCGVCLRKGPATKRLTLHRASKVLILVLKRF 272

 Score = 200 (75.5 bits), Expect = 1.4e-12, P = 1.4e-12
 Identities = 42/104 (40%), Positives = 56/104 (53%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGKS 646
             GL N GN+CY N VLQCL  TPPL    L G H + C K+ +C  C +   + RA     
Sbjct:    81 GLQNLGNTCYVNAVLQCLTHTPPLAISLLNGQHQRACQKQPFCMLCAVRAHVTRAL---- 136

Query:   647 PLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEE 690
              L P  ++   + + +     R+EDAHEFL +A+D MQ  C  E
Sbjct:   137 -LHPGDVIQPRKDLVASFHRHRQEDAHEFLMFALDAMQR-CPSE 178


>UNIPROTKB|A6NNY8 [details] [associations]
            symbol:USP27X "Ubiquitin carboxyl-terminal hydrolase 27"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            EMBL:AF238380 KO:K11366 HOVERGEN:HBG058014 EMBL:DR004246
            IPI:IPI00399220 RefSeq:NP_001138545.1 UniGene:Hs.143587
            ProteinModelPortal:A6NNY8 SMR:A6NNY8 IntAct:A6NNY8
            PhosphoSite:A6NNY8 PRIDE:A6NNY8 GeneID:389856 KEGG:hsa:389856
            UCSC:uc004dop.3 CTD:389856 GeneCards:GC0XP049646 H-InvDB:HIX0077135
            HGNC:HGNC:13486 neXtProt:NX_A6NNY8 PharmGKB:PA134993614
            InParanoid:A6NNY8 GenomeRNAi:389856 NextBio:103162
            CleanEx:HS_USP27X Genevestigator:A6NNY8 Uniprot:A6NNY8
        Length = 438

 Score = 225 (84.3 bits), Expect = 1.6e-15, P = 1.6e-15
 Identities = 52/158 (32%), Positives = 78/158 (49%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGK- 645
             GLIN GN+C+ N ++Q L  TP L  +FL   H  E    + C  CE+ +L      G  
Sbjct:    79 GLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMPSPELCLVCEMSSLFRELYSGNP 138

Query:   646 SPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCI-EEAGVNASGPLEDETT 704
             SP  P  +L  +      L   R++DAHEFL  A+D +   C  ++ G  A+ P      
Sbjct:   139 SPHVPYKLLHLVWIHARHLAGYRQQDAHEFLIAALDVLHRHCKGDDVGKAANNP-NHCNC 197

Query:   705 LIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEG 742
             +I   F G L+S + C  CHG S   +   D+++++ G
Sbjct:   198 IIDQIFTGGLQSDVTCQACHGVSTTIDPCWDISLDLPG 235


>MGI|MGI:1922333 [details] [associations]
            symbol:Usp50 "ubiquitin specific peptidase 50" species:10090
            "Mus musculus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 MGI:MGI:1922333 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 eggNOG:COG5533 HSSP:P54578 HOGENOM:HOG000231498
            GeneTree:ENSGT00670000097591 MEROPS:C19.058 HOVERGEN:HBG098592
            EMBL:AK007018 EMBL:AK015766 EMBL:BC061020 IPI:IPI00420445
            IPI:IPI00461643 RefSeq:NP_083439.2 UniGene:Mm.389373
            ProteinModelPortal:Q6P8X6 SMR:Q6P8X6 PhosphoSite:Q6P8X6
            PRIDE:Q6P8X6 Ensembl:ENSMUST00000028842 GeneID:75083 KEGG:mmu:75083
            CTD:373509 InParanoid:Q6P8X6 OMA:HFQGVTG NextBio:342171 Bgee:Q6P8X6
            CleanEx:MM_USP50 Genevestigator:Q6P8X6
            GermOnline:ENSMUSG00000027364 Uniprot:Q6P8X6
        Length = 390

 Score = 223 (83.6 bits), Expect = 1.7e-15, P = 1.7e-15
 Identities = 66/229 (28%), Positives = 104/229 (45%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLH----SKECAKKDWCFTCELENLILRAK 642
             GL N GN+CY N +LQCL    PL  YFL G +     K+C++    F   + ++ L   
Sbjct:    46 GLRNLGNTCYMNAILQCLCSVSPLVEYFLSGKYITALKKDCSEVTTAFAYLMTDMWLGDS 105

Query:   643 DGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSV----CIEEAGVNASG- 697
             D  SP   I  LS + S+        ++DA EFL Y ++ +       C        +G 
Sbjct:   106 DCVSP--EI-FLSAVGSLYPAFLKKTQQDAQEFLIYVLNELHEALKKHCRRRVNEKRTGQ 162

Query:   698 ------PLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIG-NLEEA 750
                   P + ET++I   F G L   I C KC   + + E    L++ I  D   +L++ 
Sbjct:   163 SCCRKVPAQ-ETSIITRLFEGQLSYSITCLKCESCTHKNEVFTILSLPIPSDYECSLQDC 221

Query:   751 LRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQV 799
             L+ +   + L   N+  C  C+  ++A  + TI + P I+    KRF +
Sbjct:   222 LQCFFQQDTLTWSNQIYCSFCEIKQEAAVRTTISKVPKIIVFHFKRFDI 270


>WB|WBGene00013506 [details] [associations]
            symbol:usp-3 species:6239 "Caenorhabditis elegans"
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872 GO:GO:0008270
            GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0004221 EMBL:AL132902 GeneTree:ENSGT00690000102047
            MEROPS:C19.026 RefSeq:NP_493434.3 ProteinModelPortal:Q9GRV2
            SMR:Q9GRV2 PaxDb:Q9GRV2 EnsemblMetazoa:Y71A12B.9 GeneID:190579
            KEGG:cel:CELE_Y71A12B.9 UCSC:Y71A12B.9 CTD:190579
            WormBase:Y71A12B.9 HOGENOM:HOG000020065 NextBio:946258
            Uniprot:Q9GRV2
        Length = 550

 Score = 227 (85.0 bits), Expect = 1.7e-15, P = 1.7e-15
 Identities = 61/235 (25%), Positives = 115/235 (48%)

Query:   579 NKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQ------GLHSKECAKK--DWCF 630
             +++  +P G+ N GN+C+ N VLQ LA       Y +        +H ++  K   ++C+
Sbjct:   222 SEIAYRPRGMRNVGNTCFMNAVLQALASISEFREYIMSLSSLEDYIHDEKEPKNGGNYCY 281

Query:   631 -TCELENLILR--AKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVC 687
              T E   L++   A+  + P +P        S+  +    R+ D+HEF+RY +D++ +  
Sbjct:   282 LTDEYRKLLISQSARSFREPTAPNEFREAFISVCPRFRGFRQHDSHEFMRYFMDSLHTE- 340

Query:   688 IEEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIG-- 745
             + +      G  +D+ T I   F G L+S + C  C   S + +  MDL+++I       
Sbjct:   341 MRKCR-KLPGMPDDKHTPISKYFEGTLQSSVICQTCRNCSNKIDEFMDLSLDIPAQRNAS 399

Query:   746 --NLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
                L + L  +   E+L+   K +C +CK+ +   K++ I + P +L + +KRF+
Sbjct:   400 KVRLSDCLSTFFKLEMLEKGEKPECAKCKTKQTCSKQMFIRKLPQVLCLHMKRFR 454


>TAIR|locus:2178535 [details] [associations]
            symbol:UBP21 "ubiquitin-specific protease 21"
            species:3702 "Arabidopsis thaliana" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0009165 "nucleotide
            biosynthetic process" evidence=RCA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 EMBL:CP002688 GenomeReviews:BA000015_GR
            GO:GO:0008234 GO:GO:0006511 EMBL:AB016882 GO:GO:0004221 HSSP:Q93009
            eggNOG:COG5077 KO:K11855 HOGENOM:HOG000154757 EMBL:AF302669
            IPI:IPI00527791 RefSeq:NP_568667.1 UniGene:At.7737
            ProteinModelPortal:Q9FIQ1 SMR:Q9FIQ1 MEROPS:C19.A15
            EnsemblPlants:AT5G46740.1 GeneID:834717 KEGG:ath:AT5G46740
            GeneFarm:2574 TAIR:At5g46740 InParanoid:Q9FIQ1 OMA:KPFAETS
            PhylomeDB:Q9FIQ1 ProtClustDB:CLSN2689489 Genevestigator:Q9FIQ1
            Uniprot:Q9FIQ1
        Length = 732

 Score = 229 (85.7 bits), Expect = 1.8e-15, P = 1.8e-15
 Identities = 65/215 (30%), Positives = 99/215 (46%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLT---AYFLQGLHSKECAKKDWCFTCELENLI-LRAK 642
             GL N GN+C+   VLQC   T PL      F+ G +   C  + +C    L + I L  +
Sbjct:   164 GLYNSGNTCFIASVLQCFTHTVPLIDSLRSFMYG-NPCNCGNEKFCVMQALRDHIELALR 222

Query:   643 DGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDE 702
                  ++       L    S      +EDAHEFL+  +D ++  C++      S   +D 
Sbjct:   223 SSGYGINIDRFRDNLTYFSSDFMINHQEDAHEFLQSFLDKLERCCLDPKNQLGSVSSQD- 281

Query:   703 TTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDG 762
               ++   FGG L S + C  C+  S   E  +  ++EIE D+  L +AL  +T  E L  
Sbjct:   282 LNIVDNVFGGGLMSTLCCCNCNSVSNTFEPSLGWSLEIE-DVNTLWKALESFTCVEKL-- 338

Query:   763 ENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             E++  CD CK     +K+L   + P + T  LKRF
Sbjct:   339 EDQLTCDNCKEKVTKEKQLRFDKLPPVATFHLKRF 373


>ZFIN|ZDB-GENE-041212-59 [details] [associations]
            symbol:usp2a "ubiquitin specific peptidase 2a"
            species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            ZFIN:ZDB-GENE-041212-59 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00670000098024 EMBL:BX548078 IPI:IPI00993616
            Ensembl:ENSDART00000123148 ArrayExpress:E7FEC1 Bgee:E7FEC1
            Uniprot:E7FEC1
        Length = 600

 Score = 150 (57.9 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
 Identities = 40/114 (35%), Positives = 62/114 (54%)

Query:   689 EEAGVNA-SGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIE----GD 743
             EE G    S  LE E + I   F G L+S + C++C   S   +   DL++ I     G+
Sbjct:   394 EEKGKKMWSKYLEREDSKIVDLFVGQLKSSLTCSECGYCSTVFDPFWDLSLPIAKKGYGE 453

Query:   744 IGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             + +L + +R +T  ++LDG+ K  C RCK+  +  KK T+ + P IL + LKRF
Sbjct:   454 V-SLMDCMRLFTKEDVLDGDEKPTCYRCKARRRCTKKFTVQKFPKILVLHLKRF 506

 Score = 127 (49.8 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
 Identities = 34/120 (28%), Positives = 55/120 (45%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELEN---LI--LRA 641
             GL N GN+C+ N +LQCL+ T  L  Y L   H ++    +   T  +E    LI  +  
Sbjct:   269 GLRNLGNTCFMNSILQCLSNTQSLRDYCLHNSHRRDLNNNNRTHTALMEEFAKLIQTMWT 328

Query:   642 KDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLED 701
                   +SP    +++Q    +     ++DA EFLR+ +D + +  +    V   G  ED
Sbjct:   329 SSSSEAVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHNE-VNRVTVRPRGNTED 387


>TAIR|locus:505006491 [details] [associations]
            symbol:UBP20 "ubiquitin-specific protease 20"
            species:3702 "Arabidopsis thaliana" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 EMBL:CP002687 GenomeReviews:CT486007_GR
            GO:GO:0008234 EMBL:AL161547 GO:GO:0006511 EMBL:AL021889 PIR:T05075
            GO:GO:0004221 eggNOG:COG5533 HSSP:P54578 KO:K11855 EMBL:AF302668
            IPI:IPI00534291 RefSeq:NP_567544.1 UniGene:At.21461
            ProteinModelPortal:Q9FPS7 SMR:Q9FPS7 MEROPS:C19.A16 PRIDE:Q9FPS7
            EnsemblPlants:AT4G17895.1 GeneID:827513 KEGG:ath:AT4G17895
            GeneFarm:1993 TAIR:At4g17895 HOGENOM:HOG000154757 InParanoid:Q9FPS7
            PhylomeDB:Q9FPS7 Genevestigator:Q9FPS7 Uniprot:Q9FPS7
        Length = 695

 Score = 227 (85.0 bits), Expect = 2.8e-15, P = 2.8e-15
 Identities = 63/215 (29%), Positives = 99/215 (46%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSK--ECAKKDWCFTCELENLILRA-KD 643
             GL N GNSC+ N V QC   T PL    L   +     C  + +C    +   I  A + 
Sbjct:   177 GLWNLGNSCFLNSVFQCFTHTVPLIESLLSFRYEVPCHCGNEFFCVIRAIRYHIEAALRP 236

Query:   644 GKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDET 703
              + P++P      L          ++EDAHEFL+  ++ ++ +C  +   +  G +  + 
Sbjct:   237 ERCPIAPYFFFDNLNYFSPDFQRYQQEDAHEFLQAFLEKLE-ICGSDR-TSFRGDITSQD 294

Query:   704 TLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGE 763
                   F G L S ++C  C   SE  E+ + L++EIE D+  L  AL  +T  E LD  
Sbjct:   295 V-----FSGRLISGLRCCNCDYVSETYEKSVGLSLEIE-DVDTLGSALESFTRVEKLD-- 346

Query:   764 NKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
              +  CD C      +K+L + + P + T  LKRF+
Sbjct:   347 EQLTCDNCNEKVSKEKQLLLDKLPLVATFHLKRFK 381


>FB|FBgn0031187 [details] [associations]
            symbol:CG14619 species:7227 "Drosophila melanogaster"
            [GO:0004843 "ubiquitin-specific protease activity" evidence=TAS]
            [GO:0016579 "protein deubiquitination" evidence=TAS] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0016567 "protein ubiquitination" evidence=IMP]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 EMBL:AE014298 GO:GO:0008234
            GO:GO:0006511 GO:GO:0004221 HSSP:Q93009 KO:K11833
            GeneTree:ENSGT00670000098024 UniGene:Dm.1945 MEROPS:C19.A24
            GeneID:33132 KEGG:dme:Dmel_CG14619 UCSC:CG14619-RA
            FlyBase:FBgn0031187 GenomeRNAi:33132 NextBio:782065 EMBL:BT003648
            EMBL:BT100212 RefSeq:NP_001245799.1 RefSeq:NP_001245800.1
            RefSeq:NP_728455.1 SMR:Q8IQ27 EnsemblMetazoa:FBtr0077349
            EnsemblMetazoa:FBtr0309238 EnsemblMetazoa:FBtr0309239
            InParanoid:Q8IQ27 Uniprot:Q8IQ27
        Length = 938

 Score = 144 (55.7 bits), Expect = 3.2e-15, Sum P(3) = 3.2e-15
 Identities = 35/97 (36%), Positives = 47/97 (48%)

Query:   702 ETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIG-NLEEALRRYTGTEIL 760
             E +L+   F G L+S +KCT C   S   +   DL+V +       LE  L  +   E+L
Sbjct:   747 ENSLVRDLFVGQLKSTLKCTTCGNTSVTFDPFWDLSVPLPSSSRCKLEACLDLFIREEVL 806

Query:   761 DGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             DG+    C +CK+  K  K  TI   P  L I LKRF
Sbjct:   807 DGDEMPTCAKCKTRRKCTKSFTIQRFPKYLVIHLKRF 843

 Score = 133 (51.9 bits), Expect = 3.2e-15, Sum P(3) = 3.2e-15
 Identities = 40/135 (29%), Positives = 63/135 (46%)

Query:   586 CGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLH-SKECAKKDWCFTCELENLILRAKDG 644
             CGL N GN+C+ N V+QCL+ T  LT  FL+  H S+  + KD     E   LI      
Sbjct:   613 CGLRNIGNTCFMNSVIQCLSHTQELTR-FLRSHHGSRSLSTKDQQILHEFAKLIQEMWTA 671

Query:   645 K-SPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVC---IEEAGVNASGPLE 700
                 ++P+ +     +      +  ++DA EFLR+ +D++ S     ++   +N    L 
Sbjct:   672 NVHTVTPMELKRAFSTKHRMYSDYNQQDAQEFLRFFLDSLHSALNSGVKGETLNIDDNLS 731

Query:   701 DETTLIGLTFGGYLR 715
             D      LT+  Y R
Sbjct:   732 DNKKA-DLTWEWYTR 745

 Score = 50 (22.7 bits), Expect = 3.2e-15, Sum P(3) = 3.2e-15
 Identities = 17/64 (26%), Positives = 26/64 (40%)

Query:   272 SVDNFTKLNRFCETKPGCSGDLQCTPANSLGLGASHMNVNAERSTVSSSFWGRTLEPKMD 331
             S++ F  L+      PG    +    A + GLG   ++V A RS   S   G +   +  
Sbjct:   353 SIEKFNNLSGQKRQNPGSGSGIGPGSATASGLGGGRLSV-ASRSNHGSQAGGSSSNLQQR 411

Query:   332 SCSD 335
               SD
Sbjct:   412 YSSD 415


>UNIPROTKB|F1SAF6 [details] [associations]
            symbol:USP2 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 KO:K11833
            GeneTree:ENSGT00670000098024 OMA:SASHRSY EMBL:CU915638
            RefSeq:XP_003357373.1 Ensembl:ENSSSCT00000016486 GeneID:100520041
            KEGG:ssc:100520041 ArrayExpress:F1SAF6 Uniprot:F1SAF6
        Length = 396

 Score = 143 (55.4 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
 Identities = 36/103 (34%), Positives = 57/103 (55%)

Query:   699 LEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEI--EG--DIGNLEEALRRY 754
             LE E + IG  F G L+S + CT C   S   +   DL++ I   G  ++  L + +R +
Sbjct:   195 LEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV-TLMDCMRLF 253

Query:   755 TGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             T  ++LDG+ K  C RC++ ++  KK ++   P IL + LKRF
Sbjct:   254 TKEDVLDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLKRF 296

 Score = 126 (49.4 bits), Expect = 4.9e-15, Sum P(2) = 4.9e-15
 Identities = 31/104 (29%), Positives = 54/104 (51%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENL--ILRAKDG 644
             GL N GN+C+ N +LQCL+ T  L  Y LQ L+ ++ +      T  +E    +++    
Sbjct:    59 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSSAHTALMEEFAKLIQTIWT 118

Query:   645 KSP---LSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQS 685
              SP   +SP    +++Q    +     ++DA EFLR+ +D + +
Sbjct:   119 SSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHN 162


>POMBASE|SPAC13A11.04c [details] [associations]
            symbol:ubp8 "SAGA complex ubiquitin C-terminal
            hydrolase Ubp8" species:4896 "Schizosaccharomyces pombe"
            [GO:0000124 "SAGA complex" evidence=IDA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISM] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IDA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA]
            [GO:0006338 "chromatin remodeling" evidence=IC] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=EXP;IC] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0016573 "histone acetylation" evidence=IC] [GO:0016579 "protein
            deubiquitination" evidence=IDA] [GO:0035616 "histone H2B conserved
            C-terminal lysine deubiquitination" evidence=ISS]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290 PomBase:SPAC13A11.04c
            EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0046872 GO:GO:0008270
            GO:GO:0016573 GO:GO:0006357 GO:GO:0006338 GO:GO:0000124
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843
            GO:GO:0004221 eggNOG:COG5077 KO:K11366 OMA:IHEHAKA PIR:T37611
            RefSeq:NP_592992.1 ProteinModelPortal:Q09738 STRING:Q09738
            MEROPS:C19.A61 EnsemblFungi:SPAC13A11.04c.1 GeneID:2542135
            KEGG:spo:SPAC13A11.04c OrthoDB:EOG4X3M8J NextBio:20803207
            GO:GO:0035616 Uniprot:Q09738
        Length = 449

 Score = 218 (81.8 bits), Expect = 7.4e-15, Sum P(2) = 7.4e-15
 Identities = 57/215 (26%), Positives = 102/215 (47%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENL---ILRAKD 643
             G+ N G +C+ +V+LQ +   P +   F  G H+    K+  C TC ++++   I  +K+
Sbjct:   146 GIQNLGATCFMSVILQSILHNPLVRNLFFSGFHTSTDCKRPTCMTCAIDDMFSSIYNSKN 205

Query:   644 GKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDET 703
               +   P  +L+ +  +   L    ++D HEF  Y +D M +    E+G   S P    T
Sbjct:   206 KSTFYGPTAVLNLMWKLSKSLCGYSQQDGHEFFVYLLDQMHT----ESGGGTSMPC---T 258

Query:   704 TLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGE 763
               I   F G L++ + C  C  +    + +MD++++I      L+  L R+   E +   
Sbjct:   259 CPIHRIFSGSLKNVVTCLDCKKERVAVDPLMDISLDINEP--TLQGCLERFVSKEKV--- 313

Query:   764 NKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
              +Y C  C S + A K+L   + P  + + LKRF+
Sbjct:   314 -QYSCHSCGS-KNAIKQLVFDKLPPTICMQLKRFE 346

 Score = 45 (20.9 bits), Expect = 7.4e-15, Sum P(2) = 7.4e-15
 Identities = 16/48 (33%), Positives = 20/48 (41%)

Query:    85 RCARCKAVRYCSGKCQIVH-----WRQGHKDECQPPSISHEIN-DVGN 126
             RC+ CK +   S +C   H     W  GH  E      +H I  DV N
Sbjct:    37 RCSTCKRINKRSIRCLSCHSVGCLW--GHHGEEHAMEHTHMIGVDVKN 82


>UNIPROTKB|F1LYZ4 [details] [associations]
            symbol:F1LYZ4 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS50235 GO:GO:0006511
            GO:GO:0004221 GeneTree:ENSGT00670000097591 IPI:IPI00767267
            Ensembl:ENSRNOT00000015238 Uniprot:F1LYZ4
        Length = 390

 Score = 217 (81.4 bits), Expect = 8.0e-15, P = 8.0e-15
 Identities = 67/231 (29%), Positives = 107/231 (46%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLH----SKECAKKDWCFTCELENLILRAK 642
             GL N GN+CY N +LQCL  T PL  YFL G +     K+C++    F   + ++ L   
Sbjct:    46 GLRNLGNTCYMNAILQCLCSTSPLVEYFLSGKYITALQKDCSEVTTAFAYLMTDMWLGDS 105

Query:   643 DGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSV----CIEEAGVNASG- 697
             D  SP   I  LS + S+        ++DA EFL Y ++ +       C   A    +  
Sbjct:   106 DCVSP--EI-FLSAVGSLYPAFLKKTQQDAQEFLIYVLNELHEALKKHCRGRASEKRTAQ 162

Query:   698 ------PLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIG-NLEEA 750
                   P   ET++I   F G L   I C KC   + + E    L++ I  +   +L++ 
Sbjct:   163 NCCRKVPAH-ETSIITRLFEGQLSYSITCLKCETCTYKNEVFTILSLPIPSEYECSLQDC 221

Query:   751 LRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFS 801
             L+ +   + L   N+  C  C+  ++   + TI +AP I+ + LKR+ + S
Sbjct:   222 LQCFFQQDTLTWNNQIHCSFCEIKQETAVRTTISKAPKIIVLHLKRYDLGS 272


>SGD|S000000163 [details] [associations]
            symbol:UBP13 "Putative ubiquitin-specific protease that
            cleaves Ub-protein fusions" species:4932 "Saccharomyces cerevisiae"
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0008150 "biological_process" evidence=ND] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=TAS] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 SGD:S000000163 EMBL:BK006936
            GO:GO:0006511 GO:GO:0004843 GO:GO:0004221 KO:K11872
            OrthoDB:EOG43XZCS eggNOG:COG5077 GeneTree:ENSGT00650000093027
            EMBL:Z35828 PIR:S45803 RefSeq:NP_009486.3 ProteinModelPortal:P38187
            SMR:P38187 DIP:DIP-795N IntAct:P38187 MINT:MINT-2783268
            STRING:P38187 MEROPS:C19.100 PaxDb:P38187 EnsemblFungi:YBL067C
            GeneID:852212 KEGG:sce:YBL067C CYGD:YBL067c HOGENOM:HOG000141813
            OMA:IFGMENF NextBio:970718 Genevestigator:P38187 GermOnline:YBL067C
            Uniprot:P38187
        Length = 747

 Score = 203 (76.5 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
 Identities = 50/176 (28%), Positives = 85/176 (48%)

Query:   630 FTCELENLILRAKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIE 689
             F C  EN  L      SP S + +L R   +         +DAHEF  + ++ +      
Sbjct:   397 FECITENTYLTGV--VSPSSFVDVLKRENVL---FNTTMHQDAHEFFNFLLNELSEYIER 451

Query:   690 E------AGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGD 743
             E      + +N+          I   F G L ++IKC  C   + R E  +D  +E++GD
Sbjct:   452 ENKKIAASDINSDSEPSKSKNFISDLFQGTLTNQIKCLTCDNITSRDEPFLDFPIEVQGD 511

Query:   744 IG-NLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
                +++E L+ Y   E+L+G NK+ CD C   ++A++ + + + P+ LT+ LKRF+
Sbjct:   512 EETDIQEILKSYHQREMLNGSNKFYCDECCGLQEAERLVGLKQLPDTLTLHLKRFK 567

 Score = 66 (28.3 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
 Identities = 15/30 (50%), Positives = 16/30 (53%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQ 616
             G  N GN+CY N VLQCL     L    LQ
Sbjct:   141 GYENFGNTCYCNSVLQCLYNLSSLRENILQ 170


>UNIPROTKB|E9PPM2 [details] [associations]
            symbol:USP2 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 KO:K11833
            CTD:9099 EMBL:AP003396 RefSeq:NP_001230688.1 UniGene:Hs.524085
            DNASU:9099 GeneID:9099 KEGG:hsa:9099 HGNC:HGNC:12618 ChiTaRS:USP2
            GenomeRNAi:9099 NextBio:34107 IPI:IPI01009002
            ProteinModelPortal:E9PPM2 SMR:E9PPM2 Ensembl:ENST00000455332
            UCSC:uc001pwn.4 ArrayExpress:E9PPM2 Bgee:E9PPM2 Uniprot:E9PPM2
        Length = 362

 Score = 143 (55.4 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
 Identities = 37/103 (35%), Positives = 56/103 (54%)

Query:   699 LEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEI--EG--DIGNLEEALRRY 754
             LE E + IG  F G L+S + CT C   S   +   DL++ I   G  ++  L + +R +
Sbjct:   161 LEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV-TLMDCMRLF 219

Query:   755 TGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             T  ++LDG+ K  C RC+  ++  KK +I   P IL + LKRF
Sbjct:   220 TKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRF 262

 Score = 119 (46.9 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
 Identities = 31/104 (29%), Positives = 53/104 (50%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENL--ILRAKDG 644
             GL N GN+C+ N +LQCL+ T  L  Y LQ L+ ++        T  +E    +++    
Sbjct:    25 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIWT 84

Query:   645 KSP---LSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQS 685
              SP   +SP    +++Q    +     ++DA EFLR+ +D + +
Sbjct:    85 SSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHN 128


>UNIPROTKB|E2RSX3 [details] [associations]
            symbol:USP2 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0050821 "protein
            stabilization" evidence=IEA] [GO:0048471 "perinuclear region of
            cytoplasm" evidence=IEA] [GO:0045931 "positive regulation of
            mitotic cell cycle" evidence=IEA] [GO:0042802 "identical protein
            binding" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
            binding" evidence=IEA] [GO:0030332 "cyclin binding" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=IEA] [GO:0005938
            "cell cortex" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005938
            GO:GO:0048471 GO:GO:0050821 GO:GO:0045931 GO:GO:0008234
            GO:GO:0000122 GO:GO:0006511 GO:GO:0016579 GO:GO:0004221 KO:K11833
            GeneTree:ENSGT00670000098024 CTD:9099 OMA:GFKPGPP EMBL:AAEX03003436
            EMBL:AAEX03003437 RefSeq:XP_859639.1 ProteinModelPortal:E2RSX3
            Ensembl:ENSCAFT00000019129 GeneID:608188 KEGG:cfa:608188
            NextBio:20893859 Uniprot:E2RSX3
        Length = 606

 Score = 145 (56.1 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
 Identities = 37/103 (35%), Positives = 57/103 (55%)

Query:   699 LEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEI--EG--DIGNLEEALRRY 754
             LE E + IG  F G L+S + CT C   S   +   DL++ I   G  ++  L + +R +
Sbjct:   405 LEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV-TLTDCMRLF 463

Query:   755 TGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             T  ++LDG+ K  C RC++ ++  KK +I   P IL + LKRF
Sbjct:   464 TKEDVLDGDEKPTCCRCRARKRCIKKFSIQRFPKILVLHLKRF 506

 Score = 124 (48.7 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
 Identities = 31/104 (29%), Positives = 54/104 (51%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENL--ILRAKDG 644
             GL N GN+C+ N +LQCL+ T  L  Y LQ L+ ++ +      T  +E    +++    
Sbjct:   269 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSNVHTALMEEFAKLIQTIWT 328

Query:   645 KSP---LSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQS 685
              SP   +SP    +++Q    +     ++DA EFLR+ +D + +
Sbjct:   329 SSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHN 372


>UNIPROTKB|Q2KHV7 [details] [associations]
            symbol:USP2 "Ubiquitin carboxyl-terminal hydrolase 2"
            species:9913 "Bos taurus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=ISS] [GO:0050821 "protein stabilization"
            evidence=ISS] [GO:0045931 "positive regulation of mitotic cell
            cycle" evidence=ISS] [GO:0016579 "protein deubiquitination"
            evidence=ISS] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=ISS] [GO:0048471
            "perinuclear region of cytoplasm" evidence=IEA] [GO:0042802
            "identical protein binding" evidence=IEA] [GO:0031625 "ubiquitin
            protein ligase binding" evidence=IEA] [GO:0030332 "cyclin binding"
            evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0046872
            "metal ion binding" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0007517 "muscle organ
            development" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005938
            GO:GO:0048471 GO:GO:0050821 GO:GO:0046872 GO:GO:0045931
            GO:GO:0008234 GO:GO:0000122 GO:GO:0007049 GO:GO:0007517
            GO:GO:0006511 GO:GO:0016579 GO:GO:0004221 eggNOG:COG5533
            HOVERGEN:HBG011164 KO:K11833 GeneTree:ENSGT00670000098024
            EMBL:BC112866 IPI:IPI00694687 RefSeq:NP_001039728.1
            UniGene:Bt.21721 ProteinModelPortal:Q2KHV7 SMR:Q2KHV7
            MEROPS:C19.013 PRIDE:Q2KHV7 Ensembl:ENSBTAT00000012857
            GeneID:522980 KEGG:bta:522980 CTD:9099 HOGENOM:HOG000048720
            InParanoid:Q2KHV7 OMA:GFKPGPP OrthoDB:EOG47M1XH NextBio:20873641
            Uniprot:Q2KHV7
        Length = 606

 Score = 144 (55.7 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
 Identities = 37/103 (35%), Positives = 57/103 (55%)

Query:   699 LEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEI--EG--DIGNLEEALRRY 754
             LE E + IG  F G L+S + CT C   S   +   DL++ I   G  ++  L + +R +
Sbjct:   405 LEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPITKRGYPEV-TLMDCMRLF 463

Query:   755 TGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             T  ++LDG+ K  C RC++ ++  KK +I   P IL + LKRF
Sbjct:   464 TKEDVLDGDEKPTCCRCRARKRCIKKFSIQRFPKILVLHLKRF 506

 Score = 125 (49.1 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
 Identities = 31/104 (29%), Positives = 54/104 (51%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENL--ILRAKDG 644
             GL N GN+C+ N +LQCL+ T  L  Y LQ L+ ++ +      T  +E    +++    
Sbjct:   269 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLSHSSRAHTALMEEFAKLIQTIWT 328

Query:   645 KSP---LSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQS 685
              SP   +SP    +++Q    +     ++DA EFLR+ +D + +
Sbjct:   329 SSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHN 372


>UNIPROTKB|I3LI16 [details] [associations]
            symbol:USP2 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0050821 "protein stabilization"
            evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
            cycle" evidence=IEA] [GO:0042802 "identical protein binding"
            evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
            evidence=IEA] [GO:0030332 "cyclin binding" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=IEA] [GO:0005938
            "cell cortex" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005938
            GO:GO:0048471 GO:GO:0050821 GO:GO:0045931 GO:GO:0008234
            GO:GO:0000122 GO:GO:0006511 GO:GO:0016579 GO:GO:0004221 KO:K11833
            GeneTree:ENSGT00670000098024 EMBL:CU915638 GeneID:100520041
            KEGG:ssc:100520041 RefSeq:XP_003129987.1 Ensembl:ENSSSCT00000024719
            Uniprot:I3LI16
        Length = 606

 Score = 143 (55.4 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
 Identities = 36/103 (34%), Positives = 57/103 (55%)

Query:   699 LEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEI--EG--DIGNLEEALRRY 754
             LE E + IG  F G L+S + CT C   S   +   DL++ I   G  ++  L + +R +
Sbjct:   405 LEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV-TLMDCMRLF 463

Query:   755 TGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             T  ++LDG+ K  C RC++ ++  KK ++   P IL + LKRF
Sbjct:   464 TKEDVLDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLKRF 506

 Score = 126 (49.4 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
 Identities = 31/104 (29%), Positives = 54/104 (51%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENL--ILRAKDG 644
             GL N GN+C+ N +LQCL+ T  L  Y LQ L+ ++ +      T  +E    +++    
Sbjct:   269 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSSAHTALMEEFAKLIQTIWT 328

Query:   645 KSP---LSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQS 685
              SP   +SP    +++Q    +     ++DA EFLR+ +D + +
Sbjct:   329 SSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHN 372


>UNIPROTKB|E1BF70 [details] [associations]
            symbol:USP8 "Ubiquitin carboxyl-terminal hydrolase"
            species:9913 "Bos taurus" [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00670000097591 EMBL:DAAA02029069 EMBL:DAAA02029070
            IPI:IPI00825651 Ensembl:ENSBTAT00000015809 ArrayExpress:E1BF70
            Uniprot:E1BF70
        Length = 421

 Score = 214 (80.4 bits), Expect = 2.3e-14, P = 2.3e-14
 Identities = 61/224 (27%), Positives = 106/224 (47%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAK-DGK 645
             GL N GN+CY N +LQCL  TP L  YF +  +  +   +  C   E   +I++A   G+
Sbjct:    96 GLRNLGNTCYMNSILQCLCNTPHLADYFNRNCYQDDI-NRTCCEVAEEFGIIMKALWTGQ 154

Query:   646 SP-LSPIGILSRLQSIGSQLGNGREEDAHEFLRYAID----TMQSVCIEEAGV------N 694
                +SP      +  I  Q     ++D+ E L + +D     +  V +  + +      +
Sbjct:   155 YRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMDGLHEDLNKVRLYFSKLRRLFRRS 214

Query:   695 ASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIG-NLEEALRR 753
                   +E+ ++ L F G  +S ++C  CH KS   E  M L++ +       L++ LR 
Sbjct:   215 CKHKQLNESIIVAL-FQGQFKSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRL 273

Query:   754 YTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             ++  E L   N++ C  C++   + KK+ I + P +L + LKRF
Sbjct:   274 FSKEEKLTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRF 317


>MGI|MGI:1858178 [details] [associations]
            symbol:Usp2 "ubiquitin specific peptidase 2" species:10090
            "Mus musculus" [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=ISO] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISO] [GO:0005634
            "nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0005813 "centrosome" evidence=ISO] [GO:0005938 "cell cortex"
            evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0007049 "cell cycle" evidence=IEA] [GO:0007517 "muscle organ
            development" evidence=IEA] [GO:0008233 "peptidase activity"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0016579 "protein deubiquitination" evidence=ISO]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030332 "cyclin
            binding" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
            binding" evidence=ISO] [GO:0042802 "identical protein binding"
            evidence=IDA] [GO:0045931 "positive regulation of mitotic cell
            cycle" evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
            [GO:0048471 "perinuclear region of cytoplasm" evidence=ISO;IDA]
            [GO:0048642 "negative regulation of skeletal muscle tissue
            development" evidence=ISO] [GO:0048643 "positive regulation of
            skeletal muscle tissue development" evidence=ISO] [GO:0050821
            "protein stabilization" evidence=ISO] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 MGI:MGI:1858178 GO:GO:0005938 GO:GO:0005634
            GO:GO:0005813 GO:GO:0048471 GO:GO:0050821 GO:GO:0046872
            GO:GO:0045931 GO:GO:0008234 GO:GO:0000122 GO:GO:0007049
            GO:GO:0042802 GO:GO:0007517 GO:GO:0006511 GO:GO:0016579
            GO:GO:0004221 GO:GO:0048643 eggNOG:COG5533 GO:GO:0048642
            HOGENOM:HOG000231498 HOVERGEN:HBG011164 KO:K11833
            GeneTree:ENSGT00670000098024 MEROPS:C19.013 CTD:9099
            OrthoDB:EOG47M1XH OMA:SASHRSY EMBL:AY255637 EMBL:AY255638
            EMBL:AY255639 EMBL:AY255640 EMBL:AB041799 EMBL:AK138799
            EMBL:BC017517 EMBL:AF079565 IPI:IPI00377286 IPI:IPI00409197
            IPI:IPI00785316 IPI:IPI00785464 RefSeq:NP_058088.2
            RefSeq:NP_932759.1 RefSeq:NP_932760.2 UniGene:Mm.272770
            ProteinModelPortal:O88623 SMR:O88623 STRING:O88623
            PhosphoSite:O88623 PRIDE:O88623 Ensembl:ENSMUST00000034508
            Ensembl:ENSMUST00000065461 Ensembl:ENSMUST00000114830
            Ensembl:ENSMUST00000176416 Ensembl:ENSMUST00000177054 GeneID:53376
            KEGG:mmu:53376 UCSC:uc009pbn.1 UCSC:uc009pbp.1 UCSC:uc012grp.1
            InParanoid:O88623 NextBio:310185 Bgee:O88623 CleanEx:MM_USP2
            Genevestigator:O88623 GermOnline:ENSMUSG00000032010 Uniprot:O88623
        Length = 613

 Score = 144 (55.7 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
 Identities = 37/103 (35%), Positives = 57/103 (55%)

Query:   699 LEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEI--EG--DIGNLEEALRRY 754
             LE E + IG  F G L+S + CT C   S   +   DL++ I   G  ++  L + +R +
Sbjct:   412 LEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV-TLMDCMRLF 470

Query:   755 TGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             T  +ILDG+ K  C RC++ ++  KK ++   P IL + LKRF
Sbjct:   471 TKEDILDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLKRF 513

 Score = 124 (48.7 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
 Identities = 31/104 (29%), Positives = 53/104 (50%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENL--ILRAKDG 644
             GL N GN+C+ N +LQCL+ T  L  Y LQ L+ ++        T  +E    +++    
Sbjct:   276 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEEFAKLIQTIWT 335

Query:   645 KSP---LSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQS 685
              SP   +SP    +++Q    +     ++DA EFLR+ +D + +
Sbjct:   336 SSPNDVVSPSEFKTQIQRYAPRFMGYNQQDAQEFLRFLLDGLHN 379


>UNIPROTKB|O57429 [details] [associations]
            symbol:USP2 "Ubiquitin carboxyl-terminal hydrolase 2"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=IDA] [GO:0016579 "protein deubiquitination" evidence=IDA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0048471 GO:GO:0046872
            GO:GO:0006511 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            eggNOG:COG5560 HOVERGEN:HBG011164 MEROPS:C19.013 EMBL:AF016107
            IPI:IPI00577228 UniGene:Gga.454 ProteinModelPortal:O57429
            SMR:O57429 Uniprot:O57429
        Length = 357

 Score = 145 (56.1 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
 Identities = 35/102 (34%), Positives = 56/102 (54%)

Query:   700 EDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIE----GDIGNLEEALRRYT 755
             E E + +   F G L+S + C++C   S   +   DL++ I     G++  L + LR +T
Sbjct:   157 EREDSRVSDLFVGQLKSSLTCSECGYCSTAFDPFWDLSLPIPKKGYGEV-TLMDCLRLFT 215

Query:   756 GTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
               ++LDG+ K  C RCK+  +  KK +I + P IL + LKRF
Sbjct:   216 KEDVLDGDEKPTCCRCKARTRCTKKFSIQKFPKILVLHLKRF 257

 Score = 115 (45.5 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
 Identities = 31/100 (31%), Positives = 47/100 (47%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTC---ELENLI--LRA 641
             GL N GN+C+ N +LQCL+ T  L  Y LQ  + ++        T    E   LI  L  
Sbjct:    20 GLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRDLNNNSRMRTALMSEFAKLIQLLWT 79

Query:   642 KDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAID 681
                   +SP    +++Q    +     ++DA EFLR+ +D
Sbjct:    80 SSPNDSVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLD 119


>RGD|621073 [details] [associations]
            symbol:Usp2 "ubiquitin specific peptidase 2" species:10116
            "Rattus norvegicus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter"
            evidence=IEA;ISO;ISS] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA;ISO;ISS;IMP] [GO:0005634 "nucleus"
            evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
            "centrosome" evidence=IDA] [GO:0005938 "cell cortex"
            evidence=IEA;ISO] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0007049 "cell cycle"
            evidence=IEA] [GO:0007517 "muscle organ development" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=IEA;ISO;ISS;IDA]
            [GO:0030332 "cyclin binding" evidence=IEA;ISO] [GO:0031625
            "ubiquitin protein ligase binding" evidence=IEA;ISO] [GO:0042802
            "identical protein binding" evidence=IEA;ISO] [GO:0045931 "positive
            regulation of mitotic cell cycle" evidence=IEA;ISO;ISS] [GO:0046872
            "metal ion binding" evidence=IEA] [GO:0048471 "perinuclear region
            of cytoplasm" evidence=IEA;ISO;IDA] [GO:0048642 "negative
            regulation of skeletal muscle tissue development" evidence=IDA]
            [GO:0048643 "positive regulation of skeletal muscle tissue
            development" evidence=IDA] [GO:0050821 "protein stabilization"
            evidence=IEA;ISO;ISS] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            RGD:621073 GO:GO:0005938 GO:GO:0005634 GO:GO:0005813 GO:GO:0048471
            GO:GO:0050821 GO:GO:0046872 GO:GO:0045931 GO:GO:0008234
            GO:GO:0000122 GO:GO:0007049 GO:GO:0007517 GO:GO:0006511
            EMBL:CH473975 GO:GO:0016579 GO:GO:0004221 GO:GO:0048643
            eggNOG:COG5533 HSSP:Q93009 GO:GO:0048642 HOGENOM:HOG000231498
            HOVERGEN:HBG011164 KO:K11833 GeneTree:ENSGT00670000098024
            MEROPS:C19.013 CTD:9099 OrthoDB:EOG47M1XH OMA:SASHRSY EMBL:AF202453
            EMBL:AF202454 EMBL:AF106658 EMBL:AF106659 EMBL:BC085719
            IPI:IPI00213304 IPI:IPI00213307 RefSeq:NP_446226.2
            UniGene:Rn.203590 ProteinModelPortal:Q5U349 SMR:Q5U349
            DIP:DIP-48683N STRING:Q5U349 Ensembl:ENSRNOT00000009975
            Ensembl:ENSRNOT00000036051 GeneID:115771 KEGG:rno:115771
            UCSC:RGD:621073 InParanoid:Q9R083 NextBio:618951
            ArrayExpress:Q5U349 Genevestigator:Q5U349 Uniprot:Q5U349
        Length = 618

 Score = 143 (55.4 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
 Identities = 36/103 (34%), Positives = 57/103 (55%)

Query:   699 LEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEI--EG--DIGNLEEALRRY 754
             LE E + IG  F G L+S + CT C   S   +   DL++ I   G  ++  L + +R +
Sbjct:   417 LEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV-TLMDCMRLF 475

Query:   755 TGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             T  ++LDG+ K  C RC++ ++  KK ++   P IL + LKRF
Sbjct:   476 TKEDVLDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLKRF 518

 Score = 124 (48.7 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
 Identities = 31/104 (29%), Positives = 53/104 (50%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENL--ILRAKDG 644
             GL N GN+C+ N +LQCL+ T  L  Y LQ L+ ++        T  +E    +++    
Sbjct:   281 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEEFAKLIQTIWT 340

Query:   645 KSP---LSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQS 685
              SP   +SP    +++Q    +     ++DA EFLR+ +D + +
Sbjct:   341 SSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHN 384


>UNIPROTKB|Q5U349 [details] [associations]
            symbol:Usp2 "Ubiquitin carboxyl-terminal hydrolase 2"
            species:10116 "Rattus norvegicus" [GO:0005938 "cell cortex"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0030332 "cyclin binding" evidence=IEA]
            [GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
            [GO:0042802 "identical protein binding" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 RGD:621073 GO:GO:0005938
            GO:GO:0005634 GO:GO:0005813 GO:GO:0048471 GO:GO:0050821
            GO:GO:0046872 GO:GO:0045931 GO:GO:0008234 GO:GO:0000122
            GO:GO:0007049 GO:GO:0007517 GO:GO:0006511 EMBL:CH473975
            GO:GO:0016579 GO:GO:0004221 GO:GO:0048643 eggNOG:COG5533
            HSSP:Q93009 GO:GO:0048642 HOGENOM:HOG000231498 HOVERGEN:HBG011164
            KO:K11833 GeneTree:ENSGT00670000098024 MEROPS:C19.013 CTD:9099
            OrthoDB:EOG47M1XH OMA:SASHRSY EMBL:AF202453 EMBL:AF202454
            EMBL:AF106658 EMBL:AF106659 EMBL:BC085719 IPI:IPI00213304
            IPI:IPI00213307 RefSeq:NP_446226.2 UniGene:Rn.203590
            ProteinModelPortal:Q5U349 SMR:Q5U349 DIP:DIP-48683N STRING:Q5U349
            Ensembl:ENSRNOT00000009975 Ensembl:ENSRNOT00000036051 GeneID:115771
            KEGG:rno:115771 UCSC:RGD:621073 InParanoid:Q9R083 NextBio:618951
            ArrayExpress:Q5U349 Genevestigator:Q5U349 Uniprot:Q5U349
        Length = 618

 Score = 143 (55.4 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
 Identities = 36/103 (34%), Positives = 57/103 (55%)

Query:   699 LEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEI--EG--DIGNLEEALRRY 754
             LE E + IG  F G L+S + CT C   S   +   DL++ I   G  ++  L + +R +
Sbjct:   417 LEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV-TLMDCMRLF 475

Query:   755 TGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             T  ++LDG+ K  C RC++ ++  KK ++   P IL + LKRF
Sbjct:   476 TKEDVLDGDEKPTCCRCRARKRCIKKFSVQRFPKILVLHLKRF 518

 Score = 124 (48.7 bits), Expect = 3.4e-14, Sum P(2) = 3.4e-14
 Identities = 31/104 (29%), Positives = 53/104 (50%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENL--ILRAKDG 644
             GL N GN+C+ N +LQCL+ T  L  Y LQ L+ ++        T  +E    +++    
Sbjct:   281 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALMEEFAKLIQTIWT 340

Query:   645 KSP---LSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQS 685
              SP   +SP    +++Q    +     ++DA EFLR+ +D + +
Sbjct:   341 SSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHN 384


>ASPGD|ASPL0000015845 [details] [associations]
            symbol:AN3711 species:162425 "Emericella nidulans"
            [GO:0071819 "DUBm complex" evidence=IEA] [GO:0000124 "SAGA complex"
            evidence=IEA] [GO:0046695 "SLIK (SAGA-like) complex" evidence=IEA]
            [GO:0004843 "ubiquitin-specific protease activity" evidence=IEA]
            [GO:0032947 "protein complex scaffold" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0016578 "histone deubiquitination" evidence=IEA] [GO:0051568
            "histone H3-K4 methylation" evidence=IEA] [GO:0034729 "histone
            H3-K79 methylation" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS50235
            EMBL:BN001302 GO:GO:0006511 GO:GO:0004221 OMA:IHEHAKA
            HOGENOM:HOG000216626 EnsemblFungi:CADANIAT00005016 Uniprot:C8V7J6
        Length = 484

 Score = 214 (80.4 bits), Expect = 3.4e-14, P = 3.4e-14
 Identities = 75/281 (26%), Positives = 124/281 (44%)

Query:   548 KQCLSVGCETAGRYSDKGLFSYELFVKLYNWNKVELQPC------GLINCGNSCYANVVL 601
             ++C S   E+  + + K  FS     +LY  +    +PC      GL N G +CY NV+L
Sbjct:   112 ERCRSATPESTLKVARKRRFSESSADELYVKSNANRRPCAKQGVRGLFNLGQTCYLNVIL 171

Query:   602 QCLAFTPPLTAYFLQGLHSK-ECAKKDWCFTCELENLI--LRAKDGKSPLSPIGILSRLQ 658
             Q L   P L+ YFL   H   +C   D C  C +        + D     + + +L    
Sbjct:   172 QTLLHDPILSTYFLGNGHQPHDCTVAD-CIGCAVAEAFADFHSIDKPEGFAALNLLLASW 230

Query:   659 SIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLIGLTFGGYLRSKI 718
                  L   +++DAHE+ ++ +D + +     A  N     +  +     TF G LRS +
Sbjct:   231 RASPTLAGYQQQDAHEYYQFLVDKLHT----SAEGNRENHEKGCSCFFHRTFYGKLRSSV 286

Query:   719 KCTKCHGKSERQERMMDLTVEIE---------GDIG-----NLEEALRRYTGTEILDGEN 764
              C +C   ++ ++ ++DL+++++         G  G      L   L  +T  E L  + 
Sbjct:   287 TCDRCGNVTKTEDPIVDLSLDVQVQAKKRAMGGGTGPSATPTLSGCLESFTSPEKLMAD- 345

Query:   765 KYKCDRC-KSYEKAKKKLTIVEAPNILTIALK--RFQ-VFS 801
              Y C  C  + +KA K+L I + P IL + LK  RF+  FS
Sbjct:   346 VYNCSGCGNTPQKATKQLRIKKLPAILCMQLKKQRFEHTFS 386


>POMBASE|SPBC1703.12 [details] [associations]
            symbol:ubp9 "ubiquitin C-terminal hydrolase Ubp9"
            species:4896 "Schizosaccharomyces pombe" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISM] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
            evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0006897 "endocytosis" evidence=IMP]
            [GO:0016579 "protein deubiquitination" evidence=IDA] [GO:0030428
            "cell septum" evidence=IEA] [GO:0032153 "cell division site"
            evidence=IDA] [GO:0034613 "cellular protein localization"
            evidence=IMP] [GO:0051286 "cell tip" evidence=IDA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PomBase:SPBC1703.12 GO:GO:0005829
            GO:GO:0005634 GO:GO:0034613 GO:GO:0032153 GO:GO:0051286
            EMBL:CU329671 GO:GO:0006897 GenomeReviews:CU329671_GR GO:GO:0006511
            GO:GO:0030428 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 KO:K11872
            OrthoDB:EOG43XZCS eggNOG:COG5077 PIR:T50325 RefSeq:NP_596207.1
            ProteinModelPortal:Q9P7V9 STRING:Q9P7V9 MEROPS:C19.A62
            EnsemblFungi:SPBC1703.12.1 GeneID:2540120 KEGG:spo:SPBC1703.12
            OMA:ASAFHEL NextBio:20801256 Uniprot:Q9P7V9
        Length = 585

 Score = 209 (78.6 bits), Expect = 4.8e-14, Sum P(2) = 4.8e-14
 Identities = 46/150 (30%), Positives = 83/150 (55%)

Query:   649 SPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLIGL 708
             SP   +  L+       + +++DAHEF  + ++++     E  G N S  +  +   +  
Sbjct:   176 SPERFIQVLRRDNEAFRSTQQQDAHEFFNFLLNSVTETLDEYYG-NHSDVMHPKW--VHS 232

Query:   709 TFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGENKYKC 768
              F G L S+ KC  C   + R E  +DL+++IE    ++   LR ++ +E+L  +NK+ C
Sbjct:   233 LFEGTLTSETKCLTCENITSRDESFLDLSIDIENHT-SVTSCLRSFSASEMLSSKNKFHC 291

Query:   769 DRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
             D CKS ++A+K++ I + P IL++ LKRF+
Sbjct:   292 DVCKSLQEAEKRMKIKKLPKILSLHLKRFK 321

 Score = 52 (23.4 bits), Expect = 4.8e-14, Sum P(2) = 4.8e-14
 Identities = 11/23 (47%), Positives = 13/23 (56%)

Query:   587 GLINCGNSCYANVVLQCLAFTPP 609
             GL N GN+CY + VL  L    P
Sbjct:    42 GLTNYGNTCYVSSVLVSLYHLKP 64


>UNIPROTKB|F1RYM1 [details] [associations]
            symbol:USP50 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00670000097591 OMA:HFQGVTG EMBL:CU469118
            Ensembl:ENSSSCT00000005123 Uniprot:F1RYM1
        Length = 376

 Score = 209 (78.6 bits), Expect = 5.6e-14, P = 5.6e-14
 Identities = 63/232 (27%), Positives = 108/232 (46%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLH----SKECAKKDWCFTCELENLILRAK 642
             GL N GN+CY N +LQCL    PL  YFL G +     K+C++    F   + ++ L   
Sbjct:    48 GLRNLGNTCYMNAILQCLCSISPLVEYFLSGKYITALQKDCSEVATAFAYVMTDMWLG-- 105

Query:   643 DGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIE----EAGVNASGP 698
             D +  +SP    S L ++   L    ++DA EFL Y ++ +     +     +  N S P
Sbjct:   106 DSEC-VSPEIFRSALGNLYPALMKKTQQDAQEFLIYVLNELHEALKKYHRRRSYENRSIP 164

Query:   699 ------LEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIG-NLEEAL 751
                   +  E+++I   F G L   I C KC   + + E    L + I  +   +L++ L
Sbjct:   165 RCCRKMIASESSIITRLFEGQLSYSIICLKCENCTYKNEVFTVLPLPIPSEYECSLQDCL 224

Query:   752 RRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFSPL 803
             + +   + L   N+  C  C++ ++   + +I +AP I+   LKRF +   +
Sbjct:   225 QCFFQQDTLTWNNQIHCSFCETKQETAVRASISKAPKIIVFHLKRFDILGTM 276


>UNIPROTKB|F1P9H5 [details] [associations]
            symbol:USP46 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            Pfam:PF00443 PROSITE:PS50235 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00650000093027 EMBL:AAEX03009057 EMBL:AAEX03009058
            Ensembl:ENSCAFT00000003188 Uniprot:F1P9H5
        Length = 201

 Score = 185 (70.2 bits), Expect = 2.3e-13, P = 2.3e-13
 Identities = 46/148 (31%), Positives = 76/148 (51%)

Query:   669 EEDAHEFLRYAIDTMQSVCIEEA----------GVNASGPLED---ETTLIGLTFGGYLR 715
             ++DAHEFL Y ++T+  +  EE             N + P E+   E T +   F G L 
Sbjct:     2 QQDAHEFLNYLLNTIADILQEEKKQEKQNGKLKNGNMNEPAENNKPELTWVHEIFQGTLT 61

Query:   716 SKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGENKYKCDRCKSYE 775
             ++ +C  C   S + E  + L+V++E +       LR ++ TE L  E KY C+ C S +
Sbjct:    62 NETRCLNCETVSSKDEDFLALSVDVEQNTST--HCLRDFSNTETLCSEQKYYCETCCSKQ 119

Query:   776 KAKKKLTIVEAPNILTIALKRFQVFSPL 803
             +A+K++ + + P IL + LKRF+    L
Sbjct:   120 EAQKRMRVKKLPMILALHLKRFKYMEQL 147


>UNIPROTKB|O75604 [details] [associations]
            symbol:USP2 "Ubiquitin carboxyl-terminal hydrolase 2"
            species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0007049 "cell cycle"
            evidence=IEA] [GO:0007517 "muscle organ development" evidence=IEA]
            [GO:0046872 "metal ion binding" evidence=IEA] [GO:0005813
            "centrosome" evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA]
            [GO:0042802 "identical protein binding" evidence=IEA] [GO:0048642
            "negative regulation of skeletal muscle tissue development"
            evidence=IEA] [GO:0048643 "positive regulation of skeletal muscle
            tissue development" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IEA] [GO:0016579 "protein deubiquitination" evidence=IDA]
            [GO:0050821 "protein stabilization" evidence=IMP;IDA] [GO:0045931
            "positive regulation of mitotic cell cycle" evidence=IMP]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IMP] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IMP;IDA] [GO:0030332 "cyclin
            binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0031625 "ubiquitin protein ligase binding" evidence=IPI]
            [GO:0004197 "cysteine-type endopeptidase activity" evidence=TAS]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005938 GO:GO:0005634
            GO:GO:0005813 GO:GO:0048471 GO:GO:0050821 EMBL:CH471065
            GO:GO:0046872 GO:GO:0045931 GO:GO:0000122 GO:GO:0007049
            GO:GO:0007517 GO:GO:0006511 GO:GO:0004197 GO:GO:0016579
            GO:GO:0004221 GO:GO:0048643 eggNOG:COG5533 GO:GO:0048642 PDB:3NHE
            PDBsum:3NHE PDB:2HD5 PDBsum:2HD5 PDB:2IBI PDB:3V6C PDB:3V6E
            PDBsum:2IBI PDBsum:3V6C PDBsum:3V6E HOGENOM:HOG000231498
            HOVERGEN:HBG011164 KO:K11833 MEROPS:C19.013 CTD:9099
            OrthoDB:EOG47M1XH EMBL:AF079564 EMBL:AF440755 EMBL:AK057225
            EMBL:AK292255 EMBL:EF445044 EMBL:AP003396 EMBL:BC002854
            EMBL:BC002955 EMBL:BC041366 IPI:IPI00216783 IPI:IPI00298910
            IPI:IPI00969446 IPI:IPI00969474 RefSeq:NP_001230688.1
            RefSeq:NP_004196.4 RefSeq:NP_741994.1 UniGene:Hs.524085
            ProteinModelPortal:O75604 SMR:O75604 DIP:DIP-29134N IntAct:O75604
            MINT:MINT-4304073 STRING:O75604 PhosphoSite:O75604 PaxDb:O75604
            PRIDE:O75604 DNASU:9099 Ensembl:ENST00000260187
            Ensembl:ENST00000525735 GeneID:9099 KEGG:hsa:9099 UCSC:uc001pwl.4
            UCSC:uc001pwm.4 GeneCards:GC11M119259 HGNC:HGNC:12618 HPA:HPA006777
            HPA:HPA007222 MIM:604725 neXtProt:NX_O75604 PharmGKB:PA37244
            InParanoid:O75604 OMA:SASHRSY PhylomeDB:O75604 ChEMBL:CHEMBL1293227
            ChiTaRS:USP2 EvolutionaryTrace:O75604 GenomeRNAi:9099 NextBio:34107
            ArrayExpress:O75604 Bgee:O75604 CleanEx:HS_USP2
            Genevestigator:O75604 GermOnline:ENSG00000036672 Uniprot:O75604
        Length = 605

 Score = 143 (55.4 bits), Expect = 4.1e-13, Sum P(3) = 4.1e-13
 Identities = 37/103 (35%), Positives = 56/103 (54%)

Query:   699 LEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEI--EG--DIGNLEEALRRY 754
             LE E + IG  F G L+S + CT C   S   +   DL++ I   G  ++  L + +R +
Sbjct:   404 LEREDSRIGDLFVGQLKSSLTCTDCGYCSTVFDPFWDLSLPIAKRGYPEV-TLMDCMRLF 462

Query:   755 TGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             T  ++LDG+ K  C RC+  ++  KK +I   P IL + LKRF
Sbjct:   463 TKEDVLDGDEKPTCCRCRGRKRCIKKFSIQRFPKILVLHLKRF 505

 Score = 119 (46.9 bits), Expect = 4.1e-13, Sum P(3) = 4.1e-13
 Identities = 31/104 (29%), Positives = 53/104 (50%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENL--ILRAKDG 644
             GL N GN+C+ N +LQCL+ T  L  Y LQ L+ ++        T  +E    +++    
Sbjct:   268 GLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQTIWT 327

Query:   645 KSP---LSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQS 685
              SP   +SP    +++Q    +     ++DA EFLR+ +D + +
Sbjct:   328 SSPNDVVSPSEFKTQIQRYAPRFVGYNQQDAQEFLRFLLDGLHN 371

 Score = 37 (18.1 bits), Expect = 4.1e-13, Sum P(3) = 4.1e-13
 Identities = 9/15 (60%), Positives = 10/15 (66%)

Query:   323 GRTLEPKMDSCSDAA 337
             G TL  K+DS SD A
Sbjct:   133 GVTLTQKLDSQSDLA 147


>UNIPROTKB|F1PQR0 [details] [associations]
            symbol:USP50 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00670000097591 OMA:HFQGVTG EMBL:AAEX03016119
            EMBL:AAEX03016120 Ensembl:ENSCAFT00000024071 Uniprot:F1PQR0
        Length = 334

 Score = 199 (75.1 bits), Expect = 4.7e-13, P = 4.7e-13
 Identities = 59/234 (25%), Positives = 106/234 (45%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLH----SKECAKKDWCFTCELENLILRAK 642
             GL N GN+CY N +LQCL    PL  YF+ G +     ++C +    F   + ++ L   
Sbjct:    45 GLRNLGNTCYMNAILQCLCSVSPLVEYFVSGKYITALQRDCREVATAFAYVMTDMWLG-- 102

Query:   643 DGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAI----DTMQSVCIEEAGVNASGP 698
             D +  +SP    S L S+        ++DA EFL Y +    + ++ +       +  G 
Sbjct:   103 DSEC-VSPEVFRSALGSLYPAFMKKTQQDAQEFLIYVLNELHEALKKIQYHRKRSHEKGS 161

Query:   699 --------LEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIG-NLEE 749
                     +  E+++I   F G L   I C KC   + + E    L++ I  +   +L++
Sbjct:   162 VLRCCRKVIASESSIITQLFEGQLNYSIMCLKCENCTYKNEVFTVLSLPIPSEYECSLQD 221

Query:   750 ALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFSPL 803
              L+ +   + L   N+  C  C++ ++   + +I +AP I+   LKRF +   +
Sbjct:   222 CLQCFFQQDTLTWNNQIHCSFCETKQETAVRASISKAPKIIIFHLKRFDILGTM 275


>SGD|S000000900 [details] [associations]
            symbol:UBP9 "Ubiquitin-specific protease that cleaves
            ubiquitin-protein fusions" species:4932 "Saccharomyces cerevisiae"
            [GO:0004843 "ubiquitin-specific protease activity" evidence=TAS]
            [GO:0016579 "protein deubiquitination" evidence=TAS] [GO:0005737
            "cytoplasm" evidence=IC] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0006508 "proteolysis"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 SGD:S000000900 GO:GO:0005737 EMBL:BK006939
            GO:GO:0006511 EMBL:U18839 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            KO:K11872 OrthoDB:EOG43XZCS eggNOG:COG5077
            GeneTree:ENSGT00650000093027 HOGENOM:HOG000141813 PIR:S50601
            RefSeq:NP_011024.1 ProteinModelPortal:P39967 SMR:P39967
            DIP:DIP-6551N IntAct:P39967 MINT:MINT-688224 STRING:P39967
            MEROPS:C19.A20 PRIDE:P39967 EnsemblFungi:YER098W GeneID:856835
            KEGG:sce:YER098W CYGD:YER098w OMA:NDEAINI NextBio:983138
            Genevestigator:P39967 GermOnline:YER098W Uniprot:P39967
        Length = 754

 Score = 189 (71.6 bits), Expect = 6.1e-13, Sum P(2) = 6.1e-13
 Identities = 42/155 (27%), Positives = 81/155 (52%)

Query:   648 LSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETT--- 704
             +SP   +  L+          ++DAHEFL + ++               GP + + +   
Sbjct:   412 VSPTEFVKILKKENVLFNTMMQQDAHEFLNFLLNDFSEYIQRNNPRMRFGPQKTDNSNDN 471

Query:   705 LIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIG-NLEEALRRYTGTEILDGE 763
              I   F G L ++IKC  C   + R E  +D  +E++GD   ++++ L+ Y   E+L+G 
Sbjct:   472 FITDLFKGTLTNRIKCLTCDNITSRDEPFLDFPIEVQGDEETDIQKMLKSYHQREMLNGV 531

Query:   764 NKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
             NK+ C++C   ++A++ + + + P+IL++ LKRF+
Sbjct:   532 NKFYCNKCYGLQEAERMVGLKQLPHILSLHLKRFK 566

 Score = 66 (28.3 bits), Expect = 6.1e-13, Sum P(2) = 6.1e-13
 Identities = 13/22 (59%), Positives = 14/22 (63%)

Query:   587 GLINCGNSCYANVVLQCLAFTP 608
             G  N GN+CY N VLQCL   P
Sbjct:   135 GYENFGNTCYCNSVLQCLYNIP 156


>TAIR|locus:2114653 [details] [associations]
            symbol:UBP26 "ubiquitin-specific protease 26"
            species:3702 "Arabidopsis thaliana" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IDA] [GO:0048316 "seed development" evidence=RCA;IMP]
            [GO:0007062 "sister chromatid cohesion" evidence=RCA] [GO:0009640
            "photomorphogenesis" evidence=RCA] [GO:0009790 "embryo development"
            evidence=RCA] [GO:0009793 "embryo development ending in seed
            dormancy" evidence=RCA] [GO:0009845 "seed germination"
            evidence=RCA] [GO:0009880 "embryonic pattern specification"
            evidence=RCA] [GO:0009909 "regulation of flower development"
            evidence=RCA] [GO:0009933 "meristem structural organization"
            evidence=RCA] [GO:0010072 "primary shoot apical meristem
            specification" evidence=RCA] [GO:0010162 "seed dormancy process"
            evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
            evidence=RCA] [GO:0010228 "vegetative to reproductive phase
            transition of meristem" evidence=RCA] [GO:0010431 "seed maturation"
            evidence=RCA] [GO:0010564 "regulation of cell cycle process"
            evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
            [GO:0019915 "lipid storage" evidence=RCA] [GO:0045595 "regulation
            of cell differentiation" evidence=RCA] [GO:0048366 "leaf
            development" evidence=RCA] [GO:0048825 "cotyledon development"
            evidence=RCA] [GO:0050826 "response to freezing" evidence=RCA]
            [GO:0051301 "cell division" evidence=RCA] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695
            Prosite:PS00299 EMBL:CP002686 GenomeReviews:BA000014_GR
            GO:GO:0005730 GO:GO:0008234 GO:GO:0048316 GO:GO:0006511
            InterPro:IPR019955 PROSITE:PS50053 GO:GO:0004221 eggNOG:COG5077
            EMBL:AL132964 HSSP:P54578 EMBL:AF302674 IPI:IPI00546690 PIR:T46237
            RefSeq:NP_566922.1 UniGene:At.22294 ProteinModelPortal:Q9SCJ9
            SMR:Q9SCJ9 STRING:Q9SCJ9 MEROPS:C19.068 PaxDb:Q9SCJ9 PRIDE:Q9SCJ9
            EnsemblPlants:AT3G49600.1 GeneID:824122 KEGG:ath:AT3G49600
            TAIR:At3g49600 HOGENOM:HOG000090485 InParanoid:Q9SCJ9 KO:K11858
            OMA:EECIGER Genevestigator:Q9SCJ9 Uniprot:Q9SCJ9
        Length = 1067

 Score = 208 (78.3 bits), Expect = 6.2e-13, P = 6.2e-13
 Identities = 69/227 (30%), Positives = 107/227 (47%)

Query:   582 ELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKEC-AKKDWCFTCELENLI-- 638
             E  P GL N G +CYAN +LQCL      TA F +G+ S E    K      ++  L   
Sbjct:   102 ESTPAGLTNLGATCYANSILQCLYMN---TA-FREGVFSVEVHVLKQNPVLDQIARLFAQ 157

Query:   639 LRAKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGP 698
             L A   KS +     +  L+     L NG ++D HEFL   +  ++  C+  +GV A   
Sbjct:   158 LHASQ-KSFVDSDAFVKTLE-----LDNGVQQDTHEFLTLLLSLLER-CLLHSGVKAKTI 210

Query:   699 LEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMD---LTVEIEGDIGNLEEALRRYT 755
             ++D        F G +     C+KC   SE   +M D   L + ++G + +L+ +L  Y 
Sbjct:   211 VQD-------LFSGSVSHVTTCSKCGRDSEASSKMEDFYALELNVKG-LKSLDASLNDYL 262

Query:   756 GTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFSP 802
               E L+G+N+Y C  C +   A + + +   P ++T  LKR  +F P
Sbjct:   263 SLEQLNGDNQYFCGSCNARVDATRCIKLRTLPPVITFQLKRC-IFLP 308


>TAIR|locus:2183760 [details] [associations]
            symbol:UBP22 "ubiquitin-specific protease 22"
            species:3702 "Arabidopsis thaliana" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0008270 GO:GO:0008234
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
            EMBL:AL365234 eggNOG:COG5533 KO:K11366 HSSP:P40818 EMBL:AF302670
            IPI:IPI00533926 PIR:T50788 RefSeq:NP_568239.1 UniGene:At.6008
            ProteinModelPortal:Q9LEW0 SMR:Q9LEW0 MEROPS:C19.A11 PaxDb:Q9LEW0
            PRIDE:Q9LEW0 EnsemblPlants:AT5G10790.1 GeneID:830946
            KEGG:ath:AT5G10790 TAIR:At5g10790 HOGENOM:HOG000007260
            InParanoid:Q9LEW0 OMA:RTKTKEN PhylomeDB:Q9LEW0
            ProtClustDB:CLSN2689591 Genevestigator:Q9LEW0 Uniprot:Q9LEW0
        Length = 557

 Score = 179 (68.1 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
 Identities = 49/179 (27%), Positives = 84/179 (46%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKE-CAKKDW---CFTCELENLILRAK 642
             GL N G++C+ N VLQ L   PPL  ++L G H+++ C ++     C  C+L+ +     
Sbjct:   178 GLNNLGSTCFMNAVLQALVHAPPLRNFWLSGQHNRDLCPRRTMGLLCLPCDLDVIFSAMF 237

Query:   643 DG-KSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLED 701
              G ++P SP  +L       + L    ++D+HEF    +D +     E  G +     ++
Sbjct:   238 SGDRTPYSPAHLLYSWWQHSTNLATYEQQDSHEFFISLLDRIH----ENEGKSKCLYQDN 293

Query:   702 ETT--LIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALR--RYTG 756
             E    +    F G LRS + CT C   S   +  +D+++ ++   G      R  RY+G
Sbjct:   294 EECQCITHKAFSGLLRSDVTCTTCGSTSTTYDPFIDISLTLDSMNGFSPADCRKNRYSG 352

 Score = 69 (29.3 bits), Expect = 1.4e-12, Sum P(2) = 1.4e-12
 Identities = 15/52 (28%), Positives = 27/52 (51%)

Query:   747 LEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
             L   L  +T +E L  + K  C  C    ++ K+++I   P +L + +KRF+
Sbjct:   363 LSGCLDFFTRSEKLGPDQKLNCQSCGEKRESSKQMSIRRLPLLLCLHVKRFE 414


>POMBASE|SPBC18H10.08c [details] [associations]
            symbol:ubp4 "ubiquitin C-terminal hydrolase Ubp4"
            species:4896 "Schizosaccharomyces pombe" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IDA] [GO:0005515
            "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=IDA] [GO:0030133
            "transport vesicle" evidence=IDA] [GO:0032153 "cell division site"
            evidence=IDA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            PomBase:SPBC18H10.08c GO:GO:0032153 GO:GO:0005768 EMBL:CU329671
            GenomeReviews:CU329671_GR GO:GO:0006511 GO:GO:0030133 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 eggNOG:COG5533 PIR:T39772
            RefSeq:NP_595732.2 STRING:O60139 MEROPS:C19.A58
            EnsemblFungi:SPBC18H10.08c.1 GeneID:2540837 OrthoDB:EOG4HX88F
            NextBio:20801954 Uniprot:O60139
        Length = 593

 Score = 131 (51.2 bits), Expect = 4.8e-12, Sum P(3) = 4.8e-12
 Identities = 47/149 (31%), Positives = 68/149 (45%)

Query:   572 FVKLYNWNKVE-------LQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQG------L 618
             F++L N  KV+        QP GL N GN+CY N VLQCL     LT   LQG      +
Sbjct:   206 FMELANPKKVDSSLSYENYQPIGLTNLGNTCYMNCVLQCLFACKDLTIPMLQGRGLLQNI 265

Query:   619 HSKEC----AKKDWCFTCELENLILRAKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHE 674
             ++K       K    F   L++++L    G+  +SP   L  +QS+        + DA E
Sbjct:   266 NTKNPLGTGGKITSAFFSLLQSVLLN--HGQRSISPRNFLEIVQSLNRDFSIDGQCDAQE 323

Query:   675 FLRYAIDTMQSVCIEEAGVNASGPL-EDE 702
             FL + +D +       A  +   PL ED+
Sbjct:   324 FLNFFLDKLHEDLNSNASRSPIAPLTEDQ 352

 Score = 121 (47.7 bits), Expect = 4.8e-12, Sum P(3) = 4.8e-12
 Identities = 28/103 (27%), Positives = 50/103 (48%)

Query:   699 LEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIE--GDIGNLEEALRRYTG 756
             L    +++   F G L S+ +C  C   S        L + I+    + +L+E L +++ 
Sbjct:   373 LRSNKSIVVNNFVGQLCSRTQCMTCGRTSTTFAPFTSLAIPIDDVSHVVSLQECLLKFSA 432

Query:   757 TEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQV 799
              E+L G + + C  CK    AKK + I + P  L I ++RF++
Sbjct:   433 PELLQGHDGWHCPVCKVQRSAKKVIMISKLPEYLIIQIQRFKI 475

 Score = 37 (18.1 bits), Expect = 4.8e-12, Sum P(3) = 4.8e-12
 Identities = 5/11 (45%), Positives = 7/11 (63%)

Query:    70 PQHPQCAVCFS 80
             P HP   +C+S
Sbjct:   169 PFHPSMVICYS 179


>ASPGD|ASPL0000046903 [details] [associations]
            symbol:AN2072 species:162425 "Emericella nidulans"
            [GO:0010992 "ubiquitin homeostasis" evidence=IEA] [GO:0006897
            "endocytosis" evidence=IEA] [GO:0006275 "regulation of DNA
            replication" evidence=IEA] [GO:0010995 "free ubiquitin chain
            depolymerization" evidence=IEA] [GO:0043162 "ubiquitin-dependent
            protein catabolic process via the multivesicular body sorting
            pathway" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
            [GO:0000502 "proteasome complex" evidence=IEA] [GO:0005739
            "mitochondrion" evidence=IEA] [GO:0004175 "endopeptidase activity"
            evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001394 Pfam:PF00443 PROSITE:PS50235
            EMBL:BN001307 EMBL:AACD01000032 Gene3D:3.40.250.10
            InterPro:IPR001763 SMART:SM00450 SUPFAM:SSF52821 GO:GO:0006511
            GO:GO:0004221 eggNOG:COG5533 KO:K11839 OMA:YIVFYER
            RefSeq:XP_659676.1 ProteinModelPortal:Q5BBK8
            EnsemblFungi:CADANIAT00008742 GeneID:2875212 KEGG:ani:AN2072.2
            HOGENOM:HOG000183002 OrthoDB:EOG4FJCHV Uniprot:Q5BBK8
        Length = 1022

 Score = 156 (60.0 bits), Expect = 6.4e-12, Sum P(2) = 6.4e-12
 Identities = 34/97 (35%), Positives = 49/97 (50%)

Query:   702 ETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGD-IGNLEEALRRYTGTEIL 760
             E + I   F G   S+++CT C   S   E    ++VEI     G++ + LR Y   E+L
Sbjct:   800 EESFISSLFAGQHASRLRCTTCKRTSTTYEAFYSISVEIPASGKGDIYQCLRSYCQEEML 859

Query:   761 DGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
              G+  +KC  CK    A K++ I  AP IL +  KRF
Sbjct:   860 SGDEVWKCPYCKCERVATKQIIITRAPQILVVHFKRF 896

 Score = 94 (38.1 bits), Expect = 6.4e-12, Sum P(2) = 6.4e-12
 Identities = 30/122 (24%), Positives = 56/122 (45%)

Query:   579 NKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCEL---- 634
             N+++L   GL N G +CY N  +QCL+ T  ++ +F+     +   +K+W  +  +    
Sbjct:   647 NRLKLPRTGLANFGVTCYMNSTIQCLSATVLMSKFFIDD-RFRFYVQKNWKGSQGVMPGL 705

Query:   635 -ENLILRA-KDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAG 692
               NLI    K+    + P    +    +  +    R++DA EF  + +D +     E+  
Sbjct:   706 YANLIRSLWKNDVQVIMPTSFRNFCGRLNQEWAIDRQQDAKEFFDFVVDCLH----EDLN 761

Query:   693 VN 694
             VN
Sbjct:   762 VN 763


>CGD|CAL0003741 [details] [associations]
            symbol:DOA4 species:5476 "Candida albicans" [GO:0071285
            "cellular response to lithium ion" evidence=IMP] [GO:0005768
            "endosome" evidence=IEA] [GO:0000502 "proteasome complex"
            evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0006275
            "regulation of DNA replication" evidence=IEA] [GO:0006897
            "endocytosis" evidence=IEA] [GO:0010992 "ubiquitin homeostasis"
            evidence=IEA] [GO:0010995 "free ubiquitin chain depolymerization"
            evidence=IEA] [GO:0043162 "ubiquitin-dependent protein catabolic
            process via the multivesicular body sorting pathway" evidence=IEA]
            [GO:0004175 "endopeptidase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 CGD:CAL0003741 GO:GO:0008234 Gene3D:3.40.250.10
            InterPro:IPR001763 SUPFAM:SSF52821 GO:GO:0006511 GO:GO:0004221
            GO:GO:0071285 eggNOG:COG5533 EMBL:AACQ01000092 KO:K11839
            RefSeq:XP_715008.1 ProteinModelPortal:Q59ZY4 GeneID:3643337
            KEGG:cal:CaO19.7207 Uniprot:Q59ZY4
        Length = 811

 Score = 143 (55.4 bits), Expect = 6.8e-12, Sum P(3) = 6.8e-12
 Identities = 32/94 (34%), Positives = 50/94 (53%)

Query:   711 GGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIG-----NLEEALRRYTGTEILDGENK 765
             G YL S++KC +C   S        L++ I   +      +L+E L+ +  TE+LD  NK
Sbjct:   593 GQYL-SQLKCLECGFTSTTYNAFSILSLPIPEKLNKSMKVSLDECLQEFVTTELLDDNNK 651

Query:   766 YKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQV 799
             + C  CK + K+ KK+ I   P +L I  KRF++
Sbjct:   652 WYCPNCKKFTKSTKKIAITRLPQVLIINFKRFKM 685

 Score = 111 (44.1 bits), Expect = 6.8e-12, Sum P(3) = 6.8e-12
 Identities = 20/34 (58%), Positives = 25/34 (73%)

Query:   581 VELQPCGLINCGNSCYANVVLQCLAFTPPLTAYF 614
             +E    GL+N GNSCY N V+QCLA TP LT++F
Sbjct:   416 LESYATGLVNLGNSCYMNCVIQCLAATPQLTSFF 449

 Score = 38 (18.4 bits), Expect = 6.8e-12, Sum P(3) = 6.8e-12
 Identities = 7/34 (20%), Positives = 18/34 (52%)

Query:   509 VQRSSAMSAQIENSPSNVGNGLKTSLWKAVDQFR 542
             +Q  + M  +  +  +++ NG++ S+ K    F+
Sbjct:    69 IQLIAVMKDKSNSKTADIYNGIQQSIRKKASNFK 102


>UNIPROTKB|Q59ZY4 [details] [associations]
            symbol:DOA4 "Ubiquitin carboxyl-terminal hydrolase"
            species:237561 "Candida albicans SC5314" [GO:0071285 "cellular
            response to lithium ion" evidence=IMP] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 CGD:CAL0003741 GO:GO:0008234 Gene3D:3.40.250.10
            InterPro:IPR001763 SUPFAM:SSF52821 GO:GO:0006511 GO:GO:0004221
            GO:GO:0071285 eggNOG:COG5533 EMBL:AACQ01000092 KO:K11839
            RefSeq:XP_715008.1 ProteinModelPortal:Q59ZY4 GeneID:3643337
            KEGG:cal:CaO19.7207 Uniprot:Q59ZY4
        Length = 811

 Score = 143 (55.4 bits), Expect = 6.8e-12, Sum P(3) = 6.8e-12
 Identities = 32/94 (34%), Positives = 50/94 (53%)

Query:   711 GGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIG-----NLEEALRRYTGTEILDGENK 765
             G YL S++KC +C   S        L++ I   +      +L+E L+ +  TE+LD  NK
Sbjct:   593 GQYL-SQLKCLECGFTSTTYNAFSILSLPIPEKLNKSMKVSLDECLQEFVTTELLDDNNK 651

Query:   766 YKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQV 799
             + C  CK + K+ KK+ I   P +L I  KRF++
Sbjct:   652 WYCPNCKKFTKSTKKIAITRLPQVLIINFKRFKM 685

 Score = 111 (44.1 bits), Expect = 6.8e-12, Sum P(3) = 6.8e-12
 Identities = 20/34 (58%), Positives = 25/34 (73%)

Query:   581 VELQPCGLINCGNSCYANVVLQCLAFTPPLTAYF 614
             +E    GL+N GNSCY N V+QCLA TP LT++F
Sbjct:   416 LESYATGLVNLGNSCYMNCVIQCLAATPQLTSFF 449

 Score = 38 (18.4 bits), Expect = 6.8e-12, Sum P(3) = 6.8e-12
 Identities = 7/34 (20%), Positives = 18/34 (52%)

Query:   509 VQRSSAMSAQIENSPSNVGNGLKTSLWKAVDQFR 542
             +Q  + M  +  +  +++ NG++ S+ K    F+
Sbjct:    69 IQLIAVMKDKSNSKTADIYNGIQQSIRKKASNFK 102


>UNIPROTKB|E1C0G5 [details] [associations]
            symbol:E1C0G5 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0000281 "cytokinesis after
            mitosis" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
            [GO:0005829 "cytosol" evidence=IEA] [GO:0007032 "endosome
            organization" evidence=IEA] [GO:0007265 "Ras protein signal
            transduction" evidence=IEA] [GO:0019897 "extrinsic to plasma
            membrane" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
            [GO:0070536 "protein K63-linked deubiquitination" evidence=IEA]
            [GO:0071108 "protein K48-linked deubiquitination" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 Pfam:PF00581 GO:GO:0007265
            GO:GO:0019897 Gene3D:3.40.250.10 InterPro:IPR001763 SMART:SM00450
            SUPFAM:SSF52821 PROSITE:PS50206 GO:GO:0006511 GO:GO:0005769
            GO:GO:0071108 GO:GO:0070536 GO:GO:0004843 GO:GO:0004221
            GeneTree:ENSGT00670000097591 OMA:KINDQFA InterPro:IPR015063
            Pfam:PF08969 EMBL:AADN02041582 IPI:IPI00592203
            Ensembl:ENSGALT00000009484 Uniprot:E1C0G5
        Length = 1082

 Score = 145 (56.1 bits), Expect = 8.1e-12, Sum P(2) = 8.1e-12
 Identities = 32/98 (32%), Positives = 53/98 (54%)

Query:   701 DETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIG-NLEEALRRYTGTEI 759
             +E+ ++ L F G  +S ++C  CH KS   E  M L++ +       L+E LR ++  E 
Sbjct:   882 NESIIVAL-FQGQFKSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQECLRLFSKEEK 940

Query:   760 LDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             L   N++ C  CK+   + KK+ I + P +L + LKRF
Sbjct:   941 LTDNNRFYCSHCKTRRDSLKKIEIWKLPPVLLVHLKRF 978

 Score = 105 (42.0 bits), Expect = 8.1e-12, Sum P(2) = 8.1e-12
 Identities = 29/101 (28%), Positives = 48/101 (47%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCF----TCELENLILRAK 642
             GL N GN+CY N +LQCL   P L  YF + L+  +  + ++        E   +I++A 
Sbjct:   742 GLRNLGNTCYMNSILQCLCNAPHLAEYFNKNLYQDDINRSNFLGHKGEVAEEFGVIMKAL 801

Query:   643 -DGKSP-LSPIGILSRLQSIGSQLGNGREEDAHEFLRYAID 681
               G+   +SP      +  I  Q     ++D+ E L + +D
Sbjct:   802 WTGQYKYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMD 842


>ZFIN|ZDB-GENE-060518-5 [details] [associations]
            symbol:usp40 "ubiquitin specific peptidase 40"
            species:7955 "Danio rerio" [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 ZFIN:ZDB-GENE-060518-5 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 GeneTree:ENSGT00630000089581 CTD:55230 KO:K11869
            EMBL:CR388009 EMBL:CU571254 IPI:IPI00897692 RefSeq:XP_001921353.3
            UniGene:Dr.80435 Ensembl:ENSDART00000105098 GeneID:402834
            KEGG:dre:402834 NextBio:20816662 Bgee:F1Q7D2 Uniprot:F1Q7D2
        Length = 1263

 Score = 198 (74.8 bits), Expect = 9.3e-12, P = 9.3e-12
 Identities = 69/229 (30%), Positives = 106/229 (46%)

Query:   580 KVELQPCGLINCGNSCYANVVLQCLAFTPPLTA-YFLQGLHSKEC-AKKDW------CFT 631
             K++L  CG+ N G +CY N ++Q L FTP      F  G     C A KD          
Sbjct:    34 KIKL--CGIKNQGGTCYLNSLIQTLLFTPEFREELFHLGPDELGCLADKDKPEAKVRVIP 91

Query:   632 CELENLI--LRAKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIE 689
              EL+ L   L   D ++  +     S   +   ++G   ++D  E  R     ++S  ++
Sbjct:    92 LELQRLFSHLLLVDEQTASTTDLTDSFGWTNNEEMG---QQDVQELNRILFSALESSLVD 148

Query:   690 EAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEE 749
              +G          ++LI   + G L ++I C +C   SERQE  +DLTV + G +  LEE
Sbjct:   149 TSG----------SSLIHRLYHGTLVNQITCKECSYISERQEDFLDLTVSVSG-VSGLEE 197

Query:   750 AL-RRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             AL   +   E+ +G N Y+C  C    +A K   + + P  LTI+L RF
Sbjct:   198 ALWNMFVEEEMFEGNNLYRCSGCGQLVRAAKSAKLRKLPPFLTISLLRF 246


>WB|WBGene00011507 [details] [associations]
            symbol:T05H10.1 species:6239 "Caenorhabditis elegans"
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511
            EMBL:Z47812 GO:GO:0004221 HSSP:Q93009 eggNOG:COG5077
            GeneTree:ENSGT00630000089581 KO:K11857 PIR:A88225 PIR:T24559
            RefSeq:NP_495686.2 ProteinModelPortal:Q22240 SMR:Q22240
            STRING:Q22240 MEROPS:C19.A38 PaxDb:Q22240 EnsemblMetazoa:T05H10.1
            GeneID:174290 KEGG:cel:CELE_T05H10.1 UCSC:T05H10.1 CTD:174290
            WormBase:T05H10.1 HOGENOM:HOG000020027 InParanoid:Q22240
            OMA:TSNEAYD NextBio:883388 Uniprot:Q22240
        Length = 1326

 Score = 209 (78.6 bits), Expect = 9.6e-12, Sum P(2) = 9.6e-12
 Identities = 66/224 (29%), Positives = 103/224 (45%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLT------AYFLQGLHSKECAKK-DWCFTCELENLIL 639
             GL+N   +CY N ++Q L  TP          Y  Q  H KE  KK +    C+L+ L L
Sbjct:    89 GLVNQAMTCYLNSLVQSLYMTPEFRNAMYDWEYVQQPAHIKEQRKKAEQSIPCQLQKLFL 148

Query:   640 RAKDGKSPLSPIGILSRLQSIGSQLGNGREE-DAHEFLRYAIDTMQSVCIEEAGVNASGP 698
               +  ++       L+  QS G       ++ D  E  R   D ++    +  G      
Sbjct:   149 LLQTSENDSLETKDLT--QSFGWTSNEAYDQHDVQELCRLMFDALEH---KWKGTEHEKL 203

Query:   699 LEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIE--GDIG---NLEEALRR 753
             ++D        + G +   + C KC  +S + +  +DL + ++  G I    ++EEAL  
Sbjct:   204 IQD-------LYRGTMEDFVACLKCGRESVKTDYFLDLPLAVKPFGAIHAYKSVEEALTA 256

Query:   754 YTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             +   E+LDG N+Y C+ CKS + A K L I + P +LTI LKRF
Sbjct:   257 FVQPELLDGSNQYMCENCKSKQDAHKGLRITQFPYLLTIQLKRF 300

 Score = 40 (19.1 bits), Expect = 9.6e-12, Sum P(2) = 9.6e-12
 Identities = 12/35 (34%), Positives = 19/35 (54%)

Query:   494 GMPSVPSVRSERFDNVQRSSAMSAQIENSPSNVGN 528
             G+ + PSV S    +  RS  ++    +SP+NV N
Sbjct:    43 GVAAAPSVDS----SPGRSVPLAIASSSSPANVAN 73


>UNIPROTKB|Q0CT11 [details] [associations]
            symbol:creB "Probable ubiquitin carboxyl-terminal hydrolase
            creB" species:341663 "Aspergillus terreus NIH2624" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISS] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=ISS]
            [GO:0045013 "carbon catabolite repression of transcription"
            evidence=ISS] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008234
            EMBL:CH476597 GO:GO:0006511 GO:GO:0004221 eggNOG:COG5533
            HOGENOM:HOG000192482 OrthoDB:EOG43XZCS GO:GO:0045013
            RefSeq:XP_001212351.1 EnsemblFungi:CADATEAT00006518 GeneID:4317779
            Uniprot:Q0CT11
        Length = 768

 Score = 169 (64.5 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
 Identities = 39/115 (33%), Positives = 64/115 (55%)

Query:   685 SVCIEEAGVNASGPLEDETTL-IGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGD 743
             S  +E +G  +SG     TT  +   F G L S+ +C  C   S+R E  +DL+V++E  
Sbjct:   254 SESVEHSG--SSGSKTPNTTRWVHELFEGTLTSETQCLTCEKVSQRDEVFLDLSVDLEQH 311

Query:   744 IGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
               ++   LR+++  E+L   NK+ CD C   ++A+K++ I   P IL + LKRF+
Sbjct:   312 -SSVTSCLRKFSAEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHLKRFK 365

 Score = 74 (31.1 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
 Identities = 12/23 (52%), Positives = 17/23 (73%)

Query:   587 GLINCGNSCYANVVLQCLAFTPP 609
             G+ N GN+CY N +LQCL ++ P
Sbjct:    56 GMENYGNTCYCNSILQCLYYSVP 78


>UNIPROTKB|E2QZQ0 [details] [associations]
            symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0042393 "histone binding"
            evidence=IEA] [GO:0031647 "regulation of protein stability"
            evidence=IEA] [GO:0016578 "histone deubiquitination" evidence=IEA]
            [GO:0006281 "DNA repair" evidence=IEA] [GO:0000790 "nuclear
            chromatin" evidence=IEA] [GO:0000278 "mitotic cell cycle"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
            GO:GO:0008270 GO:GO:0006281 GO:GO:0008234 GO:GO:0031647
            GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0016578 GO:GO:0004221 GO:GO:0000278
            GeneTree:ENSGT00690000102047 CTD:9960 KO:K11986 OMA:DCLRSFT
            EMBL:AAEX03016202 EMBL:AAEX03016201 RefSeq:XP_544715.3
            Ensembl:ENSCAFT00000026918 GeneID:487590 KEGG:cfa:487590
            NextBio:20861160 Uniprot:E2QZQ0
        Length = 520

 Score = 147 (56.8 bits), Expect = 2.1e-11, Sum P(3) = 2.1e-11
 Identities = 36/124 (29%), Positives = 64/124 (51%)

Query:   689 EEAGVNASGP--LEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEI------ 740
             E + ++AS    +   +T++   FGG L++++ C  C  +S + +  +DL+++I      
Sbjct:   291 ENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRN 350

Query:   741 -------EGDIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIA 793
                     G + +L + LR +T  E LD    Y C +CK  +K+ KK  I + P +L + 
Sbjct:   351 KRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLH 410

Query:   794 LKRF 797
             LKRF
Sbjct:   411 LKRF 414

 Score = 84 (34.6 bits), Expect = 2.1e-11, Sum P(3) = 2.1e-11
 Identities = 36/144 (25%), Positives = 61/144 (42%)

Query:   557 TAGRYSDKGLF-SYELFVKLYNWNKVELQPC--GLINCGNSCYANVVLQCLAFTPPLTAY 613
             TA R+  + L  +  L  KL   N      C  GL N GN+C+ N +LQ L+       Y
Sbjct:   127 TADRHRKRKLLENSSLNSKLLKVNGSTAAICATGLRNLGNTCFMNAILQSLSNIEQFCCY 186

Query:   614 F--LQGL---HSKECAKKDWCFTCELENLILRAKDGKSPL-----------SPIGILSRL 657
             F  L  +   + K   ++ +    + +N +   ++ +  L           SP  +   +
Sbjct:   187 FKELPAVELRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVV 246

Query:   658 QSIGSQLGNGREEDAHEFLRYAID 681
               I       +++DAHEF+RY +D
Sbjct:   247 WKIMPNFRGYQQQDAHEFMRYLLD 270

 Score = 48 (22.0 bits), Expect = 2.1e-11, Sum P(3) = 2.1e-11
 Identities = 10/20 (50%), Positives = 11/20 (55%)

Query:    70 PQHPQCAVCFSPTTTRCARC 89
             PQH  C  C S  +T C RC
Sbjct:    80 PQHTVCMDC-SSYSTYCYRC 98

 Score = 43 (20.2 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
 Identities = 24/80 (30%), Positives = 31/80 (38%)

Query:   528 NGLKTSLWKAVDQFRGSKSSKQCLSVGCETAGRY-SDKGLFSYE-LFVKLYNWNKVELQ- 584
             NG  +S W      R +KS   CL+      GRY +      YE   V L N  K E Q 
Sbjct:    21 NGSPSS-W-CCSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQVPLTNHKKSEKQD 78

Query:   585 -PCGLINCGNSCYANVVLQC 603
              P   +    S Y+    +C
Sbjct:    79 KPQHTVCMDCSSYSTYCYRC 98


>ASPGD|ASPL0000012423 [details] [associations]
            symbol:creB species:162425 "Emericella nidulans"
            [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISM;ISS;IDA] [GO:0045013 "carbon catabolite repression of
            transcription" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0051286 "cell tip" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] [GO:0032153 "cell division site" evidence=IEA]
            [GO:0006897 "endocytosis" evidence=IEA] [GO:0016579 "protein
            deubiquitination" evidence=IEA] [GO:0034613 "cellular protein
            localization" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 EMBL:BN001302 EMBL:AACD01000061
            GO:GO:0006511 GO:GO:0004221 eggNOG:COG5533 HOGENOM:HOG000192482
            KO:K11872 OrthoDB:EOG43XZCS GO:GO:0045013 EMBL:AF327414
            RefSeq:XP_661191.1 HSSP:Q93009 ProteinModelPortal:Q96V54
            STRING:Q96V54 EnsemblFungi:CADANIAT00005157 GeneID:2873003
            KEGG:ani:AN3587.2 OMA:DEMVEPV Uniprot:Q96V54
        Length = 766

 Score = 167 (63.8 bits), Expect = 3.9e-11, Sum P(3) = 3.9e-11
 Identities = 36/106 (33%), Positives = 60/106 (56%)

Query:   694 NASGPLEDETTL-IGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALR 752
             ++SG     TT  +   F G L S+ +C  C   S+R E  +DL+V++E    ++   LR
Sbjct:   259 SSSGSRTPNTTRWVHELFEGLLTSETQCLTCEKASQRDEVFLDLSVDLEQH-SSVTSCLR 317

Query:   753 RYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
             +++  E+L   NK+ CD C   ++A+K++ I   P IL + LKRF+
Sbjct:   318 KFSAEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHLKRFK 363

 Score = 74 (31.1 bits), Expect = 3.9e-11, Sum P(3) = 3.9e-11
 Identities = 12/23 (52%), Positives = 17/23 (73%)

Query:   587 GLINCGNSCYANVVLQCLAFTPP 609
             G+ N GN+CY N +LQCL ++ P
Sbjct:    56 GMENFGNTCYCNSILQCLYYSVP 78

 Score = 41 (19.5 bits), Expect = 3.9e-11, Sum P(3) = 3.9e-11
 Identities = 12/44 (27%), Positives = 20/44 (45%)

Query:   648 LSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEA 691
             + P   L  L+           +DAHEFL   ++ +  V +E+A
Sbjct:   195 IRPQHFLEVLRRENEMFRTAMHQDAHEFLNLLLNEVV-VDVEKA 237


>UNIPROTKB|Q96V54 [details] [associations]
            symbol:creB "Ubiquitin carboxyl-terminal hydrolase creB"
            species:227321 "Aspergillus nidulans FGSC A4" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IDA] [GO:0005515
            "protein binding" evidence=IPI] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IDA] [GO:0045013 "carbon
            catabolite repression of transcription" evidence=IMP]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008234 EMBL:BN001302
            EMBL:AACD01000061 GO:GO:0006511 GO:GO:0004221 eggNOG:COG5533
            HOGENOM:HOG000192482 KO:K11872 OrthoDB:EOG43XZCS GO:GO:0045013
            EMBL:AF327414 RefSeq:XP_661191.1 HSSP:Q93009
            ProteinModelPortal:Q96V54 STRING:Q96V54
            EnsemblFungi:CADANIAT00005157 GeneID:2873003 KEGG:ani:AN3587.2
            OMA:DEMVEPV Uniprot:Q96V54
        Length = 766

 Score = 167 (63.8 bits), Expect = 3.9e-11, Sum P(3) = 3.9e-11
 Identities = 36/106 (33%), Positives = 60/106 (56%)

Query:   694 NASGPLEDETTL-IGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALR 752
             ++SG     TT  +   F G L S+ +C  C   S+R E  +DL+V++E    ++   LR
Sbjct:   259 SSSGSRTPNTTRWVHELFEGLLTSETQCLTCEKASQRDEVFLDLSVDLEQH-SSVTSCLR 317

Query:   753 RYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
             +++  E+L   NK+ CD C   ++A+K++ I   P IL + LKRF+
Sbjct:   318 KFSAEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHLKRFK 363

 Score = 74 (31.1 bits), Expect = 3.9e-11, Sum P(3) = 3.9e-11
 Identities = 12/23 (52%), Positives = 17/23 (73%)

Query:   587 GLINCGNSCYANVVLQCLAFTPP 609
             G+ N GN+CY N +LQCL ++ P
Sbjct:    56 GMENFGNTCYCNSILQCLYYSVP 78

 Score = 41 (19.5 bits), Expect = 3.9e-11, Sum P(3) = 3.9e-11
 Identities = 12/44 (27%), Positives = 20/44 (45%)

Query:   648 LSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEA 691
             + P   L  L+           +DAHEFL   ++ +  V +E+A
Sbjct:   195 IRPQHFLEVLRRENEMFRTAMHQDAHEFLNLLLNEVV-VDVEKA 237


>UNIPROTKB|Q6JHV3 [details] [associations]
            symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
            GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0004221 EMBL:AC118274 EMBL:AC007950
            UniGene:Hs.458499 HGNC:HGNC:12626 HOVERGEN:HBG103589 ChiTaRS:USP3
            EMBL:AY461579 IPI:IPI01015614 SMR:Q6JHV3 STRING:Q6JHV3
            Ensembl:ENST00000268049 UCSC:uc002amh.3 Uniprot:Q6JHV3
        Length = 498

 Score = 147 (56.8 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
 Identities = 36/124 (29%), Positives = 64/124 (51%)

Query:   689 EEAGVNASGP--LEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEI------ 740
             E + ++AS    +   +T++   FGG L++++ C  C  +S + +  +DL+++I      
Sbjct:   269 ENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRS 328

Query:   741 -------EGDIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIA 793
                     G + +L + LR +T  E LD    Y C +CK  +K+ KK  I + P +L + 
Sbjct:   329 KRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLH 388

Query:   794 LKRF 797
             LKRF
Sbjct:   389 LKRF 392

 Score = 87 (35.7 bits), Expect = 4.3e-11, Sum P(2) = 4.3e-11
 Identities = 51/211 (24%), Positives = 82/211 (38%)

Query:   495 MPSVPSVRSERFDNVQRS-----SAMSAQIENSPSNVGNGLKTSLWKAVDQFRGSKSSKQ 549
             +P     +SE+ D VQ +     S+ S         V N  K  L + V      +   Q
Sbjct:    44 VPLTNHKKSEKQDKVQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKV------REHLQ 97

Query:   550 CLSVGCETAGRYSDKGLFSYE-LFVKLYNWNKVELQPC--GLINCGNSCYANVVLQCLAF 606
              L     TA R+  + L     L  KL   N      C  GL N GN+C+ N +LQ L+ 
Sbjct:    98 NLENSAFTADRHKKRKLLENSTLNSKLLKVNGSTTAICATGLRNLGNTCFMNAILQSLSN 157

Query:   607 TPPLTAYF--LQGL---HSKECAKKDWCFTCELENLILRAKDGKSPL-----------SP 650
                   YF  L  +   + K   ++ +    + +N +   ++ +  L           SP
Sbjct:   158 IEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSP 217

Query:   651 IGILSRLQSIGSQLGNGREEDAHEFLRYAID 681
               +   +  I       +++DAHEF+RY +D
Sbjct:   218 ESLFYVVWKIMPNFRGYQQQDAHEFMRYLLD 248

 Score = 38 (18.4 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
 Identities = 16/45 (35%), Positives = 19/45 (42%)

Query:   542 RGSKSSKQCLSVGCETAGRY-SDKGLFSYE-LFVKLYNWNKVELQ 584
             R +KS   CL+      GRY +      YE   V L N  K E Q
Sbjct:    11 RSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQVPLTNHKKSEKQ 55


>UNIPROTKB|H0YMI4 [details] [associations]
            symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
            GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0004221 EMBL:AC118274 EMBL:AC007950
            HGNC:HGNC:12626 ChiTaRS:USP3 ProteinModelPortal:H0YMI4 SMR:H0YMI4
            Ensembl:ENST00000558285 Bgee:H0YMI4 Uniprot:H0YMI4
        Length = 503

 Score = 147 (56.8 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
 Identities = 36/124 (29%), Positives = 64/124 (51%)

Query:   689 EEAGVNASGP--LEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEI------ 740
             E + ++AS    +   +T++   FGG L++++ C  C  +S + +  +DL+++I      
Sbjct:   274 ENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRS 333

Query:   741 -------EGDIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIA 793
                     G + +L + LR +T  E LD    Y C +CK  +K+ KK  I + P +L + 
Sbjct:   334 KRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLH 393

Query:   794 LKRF 797
             LKRF
Sbjct:   394 LKRF 397

 Score = 87 (35.7 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
 Identities = 51/211 (24%), Positives = 82/211 (38%)

Query:   495 MPSVPSVRSERFDNVQRS-----SAMSAQIENSPSNVGNGLKTSLWKAVDQFRGSKSSKQ 549
             +P     +SE+ D VQ +     S+ S         V N  K  L + V      +   Q
Sbjct:    49 VPLTNHKKSEKQDKVQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKV------REHLQ 102

Query:   550 CLSVGCETAGRYSDKGLFSYE-LFVKLYNWNKVELQPC--GLINCGNSCYANVVLQCLAF 606
              L     TA R+  + L     L  KL   N      C  GL N GN+C+ N +LQ L+ 
Sbjct:   103 NLENSAFTADRHKKRKLLENSTLNSKLLKVNGSTTAICATGLRNLGNTCFMNAILQSLSN 162

Query:   607 TPPLTAYF--LQGL---HSKECAKKDWCFTCELENLILRAKDGKSPL-----------SP 650
                   YF  L  +   + K   ++ +    + +N +   ++ +  L           SP
Sbjct:   163 IEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSP 222

Query:   651 IGILSRLQSIGSQLGNGREEDAHEFLRYAID 681
               +   +  I       +++DAHEF+RY +D
Sbjct:   223 ESLFYVVWKIMPNFRGYQQQDAHEFMRYLLD 253

 Score = 38 (18.4 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
 Identities = 16/45 (35%), Positives = 19/45 (42%)

Query:   542 RGSKSSKQCLSVGCETAGRY-SDKGLFSYE-LFVKLYNWNKVELQ 584
             R +KS   CL+      GRY +      YE   V L N  K E Q
Sbjct:    16 RSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQVPLTNHKKSEKQ 60


>UNIPROTKB|A1CIL1 [details] [associations]
            symbol:creB "Probable ubiquitin carboxyl-terminal hydrolase
            creB" species:344612 "Aspergillus clavatus NRRL 1" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISS] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=ISS]
            [GO:0045013 "carbon catabolite repression of transcription"
            evidence=ISS] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008234
            GO:GO:0006511 GO:GO:0004221 EMBL:DS027054 RefSeq:XP_001272142.1
            STRING:A1CIL1 EnsemblFungi:CADACLAT00004514 GeneID:4703625
            KEGG:act:ACLA_051880 eggNOG:COG5533 HOGENOM:HOG000192482 KO:K11872
            OrthoDB:EOG43XZCS GO:GO:0045013 Uniprot:A1CIL1
        Length = 760

 Score = 164 (62.8 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
 Identities = 36/105 (34%), Positives = 59/105 (56%)

Query:   695 ASGPLEDETTL-IGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRR 753
             +SG     TT  +   F G L S+ +C  C   S+R E  +DL+V++E    ++   LR+
Sbjct:   263 SSGSKTPNTTRWVHELFEGTLTSETQCLTCEKVSQRDEIFLDLSVDLEQH-SSVTSCLRK 321

Query:   754 YTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
             ++  E+L   NK+ CD C   ++A+K++ I   P IL + LKRF+
Sbjct:   322 FSAEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHLKRFK 366

 Score = 74 (31.1 bits), Expect = 4.8e-11, Sum P(2) = 4.8e-11
 Identities = 12/23 (52%), Positives = 17/23 (73%)

Query:   587 GLINCGNSCYANVVLQCLAFTPP 609
             G+ N GN+CY N +LQCL ++ P
Sbjct:    56 GMENYGNTCYCNSILQCLYYSVP 78


>UNIPROTKB|Q9Y6I4 [details] [associations]
            symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase 3"
            species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0042393 "histone binding" evidence=IPI]
            [GO:0016578 "histone deubiquitination" evidence=IDA] [GO:0031647
            "regulation of protein stability" evidence=IDA] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IMP] [GO:0000790
            "nuclear chromatin" evidence=IDA] [GO:0000278 "mitotic cell cycle"
            evidence=IMP] [GO:0006281 "DNA repair" evidence=IMP] [GO:0004843
            "ubiquitin-specific protease activity" evidence=TAS]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872 GO:GO:0008270
            GO:GO:0006281 GO:GO:0031647 GO:GO:0000790 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 EMBL:CH471082 GO:GO:0016578
            GO:GO:0004843 GO:GO:0004221 GO:GO:0000278 eggNOG:COG5533
            EMBL:AC118274 HOGENOM:HOG000231498 EMBL:AF073344 EMBL:BT007269
            EMBL:AK301236 EMBL:AC007950 EMBL:BC018113 EMBL:BC065300
            EMBL:BC107137 EMBL:BC107138 IPI:IPI00002330 IPI:IPI01008797
            RefSeq:NP_001243631.1 RefSeq:NP_006528.2 UniGene:Hs.458499
            ProteinModelPortal:Q9Y6I4 SMR:Q9Y6I4 IntAct:Q9Y6I4 STRING:Q9Y6I4
            MEROPS:C19.026 PhosphoSite:Q9Y6I4 PaxDb:Q9Y6I4 PRIDE:Q9Y6I4
            DNASU:9960 Ensembl:ENST00000380324 Ensembl:ENST00000540797
            GeneID:9960 KEGG:hsa:9960 UCSC:uc002amf.3 CTD:9960
            GeneCards:GC15P063796 H-InvDB:HIX0012328 HGNC:HGNC:12626 MIM:604728
            neXtProt:NX_Q9Y6I4 PharmGKB:PA37251 HOVERGEN:HBG103589
            InParanoid:Q9Y6I4 KO:K11986 OMA:DCLRSFT OrthoDB:EOG4G4GQC
            ChiTaRS:USP3 GenomeRNAi:9960 NextBio:37582 ArrayExpress:Q9Y6I4
            Bgee:Q9Y6I4 CleanEx:HS_USP3 Genevestigator:Q9Y6I4
            GermOnline:ENSG00000140455 Uniprot:Q9Y6I4
        Length = 520

 Score = 147 (56.8 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
 Identities = 36/124 (29%), Positives = 64/124 (51%)

Query:   689 EEAGVNASGP--LEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEI------ 740
             E + ++AS    +   +T++   FGG L++++ C  C  +S + +  +DL+++I      
Sbjct:   291 ENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRS 350

Query:   741 -------EGDIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIA 793
                     G + +L + LR +T  E LD    Y C +CK  +K+ KK  I + P +L + 
Sbjct:   351 KRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLH 410

Query:   794 LKRF 797
             LKRF
Sbjct:   411 LKRF 414

 Score = 87 (35.7 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
 Identities = 51/211 (24%), Positives = 82/211 (38%)

Query:   495 MPSVPSVRSERFDNVQRS-----SAMSAQIENSPSNVGNGLKTSLWKAVDQFRGSKSSKQ 549
             +P     +SE+ D VQ +     S+ S         V N  K  L + V      +   Q
Sbjct:    66 VPLTNHKKSEKQDKVQHTVCMDCSSYSTYCYRCDDFVVNDTKLGLVQKV------REHLQ 119

Query:   550 CLSVGCETAGRYSDKGLFSYE-LFVKLYNWNKVELQPC--GLINCGNSCYANVVLQCLAF 606
              L     TA R+  + L     L  KL   N      C  GL N GN+C+ N +LQ L+ 
Sbjct:   120 NLENSAFTADRHKKRKLLENSTLNSKLLKVNGSTTAICATGLRNLGNTCFMNAILQSLSN 179

Query:   607 TPPLTAYF--LQGL---HSKECAKKDWCFTCELENLILRAKDGKSPL-----------SP 650
                   YF  L  +   + K   ++ +    + +N +   ++ +  L           SP
Sbjct:   180 IEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSP 239

Query:   651 IGILSRLQSIGSQLGNGREEDAHEFLRYAID 681
               +   +  I       +++DAHEF+RY +D
Sbjct:   240 ESLFYVVWKIMPNFRGYQQQDAHEFMRYLLD 270

 Score = 40 (19.1 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
 Identities = 20/59 (33%), Positives = 24/59 (40%)

Query:   528 NGLKTSLWKAVDQFRGSKSSKQCLSVGCETAGRY-SDKGLFSYE-LFVKLYNWNKVELQ 584
             NG  +S W      R +KS   CL+      GRY +      YE   V L N  K E Q
Sbjct:    21 NGSPSS-W-CCSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQVPLTNHKKSEKQ 77


>UNIPROTKB|F1N0I6 [details] [associations]
            symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase"
            species:9913 "Bos taurus" [GO:0042393 "histone binding"
            evidence=IEA] [GO:0031647 "regulation of protein stability"
            evidence=IEA] [GO:0016578 "histone deubiquitination" evidence=IEA]
            [GO:0006281 "DNA repair" evidence=IEA] [GO:0000790 "nuclear
            chromatin" evidence=IEA] [GO:0000278 "mitotic cell cycle"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
            GO:GO:0008270 GO:GO:0006281 GO:GO:0008234 GO:GO:0031647
            GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0016578 GO:GO:0004221 GO:GO:0000278
            GeneTree:ENSGT00690000102047 OMA:DCLRSFT EMBL:DAAA02028746
            IPI:IPI00715279 Ensembl:ENSBTAT00000011598 Uniprot:F1N0I6
        Length = 521

 Score = 147 (56.8 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
 Identities = 37/128 (28%), Positives = 64/128 (50%)

Query:   685 SVCIEEAGVNASGP--LEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEG 742
             S+  E + ++AS    +   +T++   FGG L++++ C  C  +S + +  +DL+++I  
Sbjct:   288 SILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPS 347

Query:   743 DIGN-------------LEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNI 789
                N             L + LR +T  E LD    Y C +CK  +K+ KK  I + P +
Sbjct:   348 QFRNKRSKNQENGPTCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKV 407

Query:   790 LTIALKRF 797
             L + LKRF
Sbjct:   408 LCLHLKRF 415

 Score = 87 (35.7 bits), Expect = 5.0e-11, Sum P(2) = 5.0e-11
 Identities = 37/144 (25%), Positives = 61/144 (42%)

Query:   557 TAGRYSDKGLF-SYELFVKLYNWNKVELQPC--GLINCGNSCYANVVLQCLAFTPPLTAY 613
             TA R+  + L  +  L  KL   N      C  GL N GN+C+ N +LQ L+       Y
Sbjct:   128 TADRHRKRKLLENSSLNSKLLKVNGSTTAICATGLRNLGNTCFMNAILQSLSNIEQFCCY 187

Query:   614 F--LQGL---HSKECAKKDWCFTCELENLILRAKDGKSPL-----------SPIGILSRL 657
             F  L  +   + K   ++ +    + EN +   ++ +  L           SP  +   +
Sbjct:   188 FKELPAVELRNGKTAGRRTYHTRSQGENNVSLVEEFRKTLCALWQGSQTAFSPESLFYVV 247

Query:   658 QSIGSQLGNGREEDAHEFLRYAID 681
               I       +++DAHEF+RY +D
Sbjct:   248 WKIMPNFRGYQQQDAHEFMRYLLD 271

 Score = 42 (19.8 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
 Identities = 19/59 (32%), Positives = 24/59 (40%)

Query:   528 NGLKTSLWKAVDQFRGSKSSKQCLSVGCETAGRY-SDKGLFSYE-LFVKLYNWNKVELQ 584
             NG  +S W      R +KS   CL+      GRY +      YE   + L N  K E Q
Sbjct:    21 NGSPSS-WCCSAVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQIPLTNHKKSEKQ 78


>FB|FBgn0039025 [details] [associations]
            symbol:Usp12-46 "Ubiquitin-specific protease 12/46 ortholog"
            species:7227 "Drosophila melanogaster" [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0045746 "negative regulation of Notch signaling pathway"
            evidence=IGI;IMP] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00973 PROSITE:PS50235 EMBL:AE014297
            GO:GO:0006511 GO:GO:0004221 HSSP:Q93009 eggNOG:COG5077 KO:K11842
            GeneTree:ENSGT00650000093027 OMA:TEPTWVH UniGene:Dm.11299
            EMBL:BT010235 RefSeq:NP_651099.1 SMR:Q9VCT9 STRING:Q9VCT9
            MEROPS:C19.A23 EnsemblMetazoa:FBtr0084311 GeneID:42702
            KEGG:dme:Dmel_CG7023 UCSC:CG7023-RB FlyBase:FBgn0039025
            InParanoid:Q9VCT9 GenomeRNAi:42702 NextBio:830136 Uniprot:Q9VCT9
        Length = 424

 Score = 184 (69.8 bits), Expect = 5.2e-11, P = 5.2e-11
 Identities = 37/107 (34%), Positives = 61/107 (57%)

Query:   692 GVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEAL 751
             G   +G    E T +   F G L S+ +C  C   S + E   DL V+++ +  ++   L
Sbjct:   211 GTGTNGA-NSEPTWVHEIFQGILTSETRCLNCETVSSKDENFFDLQVDVDQNT-SITHCL 268

Query:   752 RRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
             R ++ TE L  +NK+KCD C SY++A+K++ + + P IL + LKRF+
Sbjct:   269 RCFSNTETLCSDNKFKCDNCCSYQEAQKRMRVKKLPMILALHLKRFK 315

 Score = 142 (55.0 bits), Expect = 2.2e-06, P = 2.2e-06
 Identities = 48/177 (27%), Positives = 75/177 (42%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTC--ELENLILRAKDG 644
             GL+N GN+CY+N VLQ L F  P     L+   +K    K+   +C  +L   I   K  
Sbjct:    25 GLVNFGNTCYSNSVLQALYFCKPFREKVLE-YKAKNKRPKETLLSCLADLFYSIATQKKK 83

Query:   645 KSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETT 704
                ++P   ++RL+    +  N  ++DAHEFL + I+ +  + + E     S      T 
Sbjct:    84 VGSIAPKKFITRLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERNAGPSNGNPKATN 143

Query:   705 LIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILD 761
               G T    + S I  +K    S       + T    G+  N   +L     T +LD
Sbjct:   144 QGGSTSA--MASSI-ASKSSSTSNSNSNS-NSTTNSNGNSSNSTGSLN--ANTSVLD 194


>UNIPROTKB|H0YLB7 [details] [associations]
            symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            EMBL:AC118274 EMBL:AC007950 HGNC:HGNC:12626 ChiTaRS:USP3
            ProteinModelPortal:H0YLB7 SMR:H0YLB7 Ensembl:ENST00000559711
            Bgee:H0YLB7 Uniprot:H0YLB7
        Length = 431

 Score = 147 (56.8 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
 Identities = 36/124 (29%), Positives = 64/124 (51%)

Query:   689 EEAGVNASGP--LEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEI------ 740
             E + ++AS    +   +T++   FGG L++++ C  C  +S + +  +DL+++I      
Sbjct:   202 ENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRS 261

Query:   741 -------EGDIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIA 793
                     G + +L + LR +T  E LD    Y C +CK  +K+ KK  I + P +L + 
Sbjct:   262 KRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLH 321

Query:   794 LKRF 797
             LKRF
Sbjct:   322 LKRF 325

 Score = 84 (34.6 bits), Expect = 5.4e-11, Sum P(2) = 5.4e-11
 Identities = 36/144 (25%), Positives = 60/144 (41%)

Query:   557 TAGRYSDKGLFSYE-LFVKLYNWNKVELQPC--GLINCGNSCYANVVLQCLAFTPPLTAY 613
             TA R+  + L     L  KL   N      C  GL N GN+C+ N +LQ L+       Y
Sbjct:    38 TADRHKKRKLLENSTLNSKLLKVNGSTTAICATGLRNLGNTCFMNAILQSLSNIEQFCCY 97

Query:   614 F--LQGL---HSKECAKKDWCFTCELENLILRAKDGKSPL-----------SPIGILSRL 657
             F  L  +   + K   ++ +    + +N +   ++ +  L           SP  +   +
Sbjct:    98 FKELPAVELRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVV 157

Query:   658 QSIGSQLGNGREEDAHEFLRYAID 681
               I       +++DAHEF+RY +D
Sbjct:   158 WKIMPNFRGYQQQDAHEFMRYLLD 181


>UNIPROTKB|H0YKU8 [details] [associations]
            symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008270 GO:GO:0008234
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
            EMBL:AC118274 EMBL:AC007950 HGNC:HGNC:12626 ChiTaRS:USP3
            Ensembl:ENST00000559257 Uniprot:H0YKU8
        Length = 443

 Score = 147 (56.8 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
 Identities = 36/124 (29%), Positives = 64/124 (51%)

Query:   689 EEAGVNASGP--LEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEI------ 740
             E + ++AS    +   +T++   FGG L++++ C  C  +S + +  +DL+++I      
Sbjct:   214 ENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRS 273

Query:   741 -------EGDIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIA 793
                     G + +L + LR +T  E LD    Y C +CK  +K+ KK  I + P +L + 
Sbjct:   274 KRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKVLCLH 333

Query:   794 LKRF 797
             LKRF
Sbjct:   334 LKRF 337

 Score = 84 (34.6 bits), Expect = 5.9e-11, Sum P(2) = 5.9e-11
 Identities = 36/144 (25%), Positives = 60/144 (41%)

Query:   557 TAGRYSDKGLFSYE-LFVKLYNWNKVELQPC--GLINCGNSCYANVVLQCLAFTPPLTAY 613
             TA R+  + L     L  KL   N      C  GL N GN+C+ N +LQ L+       Y
Sbjct:    50 TADRHKKRKLLENSTLNSKLLKVNGSTTAICATGLRNLGNTCFMNAILQSLSNIEQFCCY 109

Query:   614 F--LQGL---HSKECAKKDWCFTCELENLILRAKDGKSPL-----------SPIGILSRL 657
             F  L  +   + K   ++ +    + +N +   ++ +  L           SP  +   +
Sbjct:   110 FKELPAVELRNGKTAGRRTYHTRSQGDNNVSLVEEFRKTLCALWQGSQTAFSPESLFYVV 169

Query:   658 QSIGSQLGNGREEDAHEFLRYAID 681
               I       +++DAHEF+RY +D
Sbjct:   170 WKIMPNFRGYQQQDAHEFMRYLLD 193


>UNIPROTKB|A1CW53 [details] [associations]
            symbol:creB "Probable ubiquitin carboxyl-terminal hydrolase
            creB" species:331117 "Neosartorya fischeri NRRL 181" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISS] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=ISS]
            [GO:0045013 "carbon catabolite repression of transcription"
            evidence=ISS] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008234
            GO:GO:0006511 GO:GO:0004221 eggNOG:COG5533 HOGENOM:HOG000192482
            KO:K11872 OrthoDB:EOG43XZCS GO:GO:0045013 EMBL:DS027685
            RefSeq:XP_001266752.1 EnsemblFungi:CADNFIAT00009466 GeneID:4593253
            KEGG:nfi:NFIA_103430 Uniprot:A1CW53
        Length = 761

 Score = 163 (62.4 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
 Identities = 32/89 (35%), Positives = 53/89 (59%)

Query:   710 FGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGENKYKCD 769
             F G L S+ +C  C   S+R E  +DL+V++E    ++   LR+++  E+L   NK+ CD
Sbjct:   278 FEGLLTSETQCLTCEKVSQRDEVFLDLSVDLEQH-SSVTSCLRKFSAEEMLCERNKFHCD 336

Query:   770 RCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
              C   ++A+K++ I   P IL + LKRF+
Sbjct:   337 NCGGLQEAEKRMKIKRLPRILALHLKRFK 365

 Score = 74 (31.1 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
 Identities = 12/23 (52%), Positives = 17/23 (73%)

Query:   587 GLINCGNSCYANVVLQCLAFTPP 609
             G+ N GN+CY N +LQCL ++ P
Sbjct:    56 GMENYGNTCYCNSILQCLYYSVP 78

 Score = 41 (19.5 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
 Identities = 15/65 (23%), Positives = 28/65 (43%)

Query:   494 GMPSVPSVRSERFDNVQRSSAMSAQ----IENSPSNVGNGLKTSLWKAV-DQFRGSKSSK 548
             GMP  P  + E  D+ +    M+ Q    +E   +    G+  SL+ ++ D F     S+
Sbjct:   130 GMPPNPQQKPEDKDSPEYKKKMALQTLPLLETQNNAASYGMSESLFTSLKDIFESVVGSQ 189

Query:   549 QCLSV 553
               + +
Sbjct:   190 SRIGI 194


>ZFIN|ZDB-GENE-070705-213 [details] [associations]
            symbol:usp46 "ubiquitin specific peptidase 46"
            species:7955 "Danio rerio" [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA;ISS] [GO:0016579 "protein
            deubiquitination" evidence=ISS] [GO:0004843 "ubiquitin-specific
            protease activity" evidence=ISS] [GO:0007610 "behavior"
            evidence=IEA;ISS] [GO:0032228 "regulation of synaptic transmission,
            GABAergic" evidence=ISS] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0006508 "proteolysis" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 ZFIN:ZDB-GENE-070705-213 GO:GO:0008234
            GO:GO:0006511 GO:GO:0004221 EMBL:CT827859
            GeneTree:ENSGT00650000093027 EMBL:CU693368 IPI:IPI00774667
            Ensembl:ENSDART00000066678 Bgee:F1REW3 Uniprot:F1REW3
        Length = 375

 Score = 182 (69.1 bits), Expect = 6.2e-11, P = 6.2e-11
 Identities = 64/213 (30%), Positives = 100/213 (46%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTC--ELENLILRAKDG 644
             GL+N GN+CY N VLQ L F  P     L   +  +  KK+   TC  +L + I   K  
Sbjct:    40 GLVNFGNTCYCNSVLQALYFCRPFRENVLA--YKVQQKKKENLLTCLADLFHSIATQKKK 97

Query:   645 KSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNA-SGPLEDET 703
                + P   +SRL+       N  ++DAHEFL Y ++T+  +  EE      +G L++  
Sbjct:    98 VGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTVADILQEERKQEKQNGRLKNNG 157

Query:   704 TLIGLTFGGYLRSKIKCTKCH----GKSERQERMMDL-TV--------EIEGDIG---NL 747
             T I  T     ++KI  T  H    G    + R ++  TV        ++  D+    ++
Sbjct:   158 TAIA-TDTEPEQNKIDPTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTSI 216

Query:   748 EEALRRYTGTEILDGENKYKCDRCKSYEKAKKK 780
                LR ++ TE L  E KY C+ C S ++A+K+
Sbjct:   217 THCLRDFSNTETLCSEYKYYCEMCCSKQEAQKR 249

 Score = 152 (58.6 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 34/103 (33%), Positives = 57/103 (55%)

Query:   702 ETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILD 761
             + T +   F G L ++ +C  C   S + E  +DL+V++E +  ++   LR ++ TE L 
Sbjct:   172 DPTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNT-SITHCLRDFSNTETLC 230

Query:   762 GENKYKCDRCKSYEKA-KKKLTIVEAPNILTIALKRFQVFSPL 803
              E KY C+ C S ++A K++L   + P IL + LKRF+    L
Sbjct:   231 SEYKYYCEMCCSKQEAQKRRLVSSKIPKILALHLKRFKYMEQL 273


>UNIPROTKB|B0Y4P5 [details] [associations]
            symbol:creB "Probable ubiquitin carboxyl-terminal hydrolase
            creB" species:451804 "Aspergillus fumigatus A1163" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISS] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=ISS]
            [GO:0045013 "carbon catabolite repression of transcription"
            evidence=ISS] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008234
            GO:GO:0006511 GO:GO:0004221 HOGENOM:HOG000192482 GO:GO:0045013
            EMBL:DS499598 EnsemblFungi:CADAFUBT00006929 Uniprot:B0Y4P5
        Length = 767

 Score = 163 (62.4 bits), Expect = 6.7e-11, Sum P(3) = 6.7e-11
 Identities = 32/89 (35%), Positives = 53/89 (59%)

Query:   710 FGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGENKYKCD 769
             F G L S+ +C  C   S+R E  +DL+V++E    ++   LR+++  E+L   NK+ CD
Sbjct:   272 FEGLLTSETQCLTCEKVSQRDEVFLDLSVDLEQH-SSVTSCLRKFSAEEMLCERNKFHCD 330

Query:   770 RCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
              C   ++A+K++ I   P IL + LKRF+
Sbjct:   331 NCGGLQEAEKRMKIKRLPRILALHLKRFK 359

 Score = 74 (31.1 bits), Expect = 6.7e-11, Sum P(3) = 6.7e-11
 Identities = 12/23 (52%), Positives = 17/23 (73%)

Query:   587 GLINCGNSCYANVVLQCLAFTPP 609
             G+ N GN+CY N +LQCL ++ P
Sbjct:    50 GMENYGNTCYCNSILQCLYYSVP 72

 Score = 43 (20.2 bits), Expect = 6.7e-11, Sum P(3) = 6.7e-11
 Identities = 11/31 (35%), Positives = 17/31 (54%)

Query:   670 EDAHEFLRYAIDTMQSVCIEEAGVNASGPLE 700
             +DAHEFL   ++ +  V   EA  +   P+E
Sbjct:   211 QDAHEFLNLLLNEV--VANVEAEASKQPPIE 239

 Score = 42 (19.8 bits), Expect = 1.1e-07, Sum P(3) = 1.1e-07
 Identities = 18/61 (29%), Positives = 27/61 (44%)

Query:   494 GMPSVPSVRSERFDNVQRSSAMSAQI------ENSPSNVG--NGLKTSLWKAVDQFRGSK 545
             GMP  P  + E  D+ +    M+ Q       +N+ S+ G    L TSL    +   GS+
Sbjct:   124 GMPPNPQQKPEDKDSPEYKKKMALQTLPLLETQNNASSYGMSESLFTSLKDIFESVVGSQ 183

Query:   546 S 546
             S
Sbjct:   184 S 184


>UNIPROTKB|Q4WQI1 [details] [associations]
            symbol:creB "Probable ubiquitin carboxyl-terminal hydrolase
            creB" species:330879 "Aspergillus fumigatus Af293" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISS] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=ISS]
            [GO:0045013 "carbon catabolite repression of transcription"
            evidence=ISS] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008234
            GO:GO:0006511 GO:GO:0004221 eggNOG:COG5533 HOGENOM:HOG000192482
            KO:K11872 OrthoDB:EOG43XZCS GO:GO:0045013 EMBL:AAHF01000005
            RefSeq:XP_751541.2 STRING:Q4WQI1 EnsemblFungi:CADAFUAT00007967
            GeneID:3509101 GenomeReviews:CM000172_GR KEGG:afm:AFUA_4G12910
            Uniprot:Q4WQI1
        Length = 775

 Score = 163 (62.4 bits), Expect = 7.0e-11, Sum P(3) = 7.0e-11
 Identities = 32/89 (35%), Positives = 53/89 (59%)

Query:   710 FGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGENKYKCD 769
             F G L S+ +C  C   S+R E  +DL+V++E    ++   LR+++  E+L   NK+ CD
Sbjct:   278 FEGLLTSETQCLTCEKVSQRDEVFLDLSVDLEQH-SSVTSCLRKFSAEEMLCERNKFHCD 336

Query:   770 RCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
              C   ++A+K++ I   P IL + LKRF+
Sbjct:   337 NCGGLQEAEKRMKIKRLPRILALHLKRFK 365

 Score = 74 (31.1 bits), Expect = 7.0e-11, Sum P(3) = 7.0e-11
 Identities = 12/23 (52%), Positives = 17/23 (73%)

Query:   587 GLINCGNSCYANVVLQCLAFTPP 609
             G+ N GN+CY N +LQCL ++ P
Sbjct:    56 GMENYGNTCYCNSILQCLYYSVP 78

 Score = 43 (20.2 bits), Expect = 7.0e-11, Sum P(3) = 7.0e-11
 Identities = 11/31 (35%), Positives = 17/31 (54%)

Query:   670 EDAHEFLRYAIDTMQSVCIEEAGVNASGPLE 700
             +DAHEFL   ++ +  V   EA  +   P+E
Sbjct:   217 QDAHEFLNLLLNEV--VANVEAEASKQPPIE 245

 Score = 42 (19.8 bits), Expect = 1.2e-07, Sum P(3) = 1.2e-07
 Identities = 18/61 (29%), Positives = 27/61 (44%)

Query:   494 GMPSVPSVRSERFDNVQRSSAMSAQI------ENSPSNVG--NGLKTSLWKAVDQFRGSK 545
             GMP  P  + E  D+ +    M+ Q       +N+ S+ G    L TSL    +   GS+
Sbjct:   130 GMPPNPQQKPEDKDSPEYKKKMALQTLPLLETQNNASSYGMSESLFTSLKDIFESVVGSQ 189

Query:   546 S 546
             S
Sbjct:   190 S 190


>DICTYBASE|DDB_G0271798 [details] [associations]
            symbol:DDB_G0271798 "putative ubiquitin
            carboxyl-terminal hydrolase (UCH)" species:44689 "Dictyostelium
            discoideum" [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0008233 "peptidase activity"
            evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS50271 dictyBase:DDB_G0271798
            GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 EMBL:AAFI02000006
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
            eggNOG:COG5533 KO:K11366 RefSeq:XP_645473.2
            EnsemblProtists:DDB0304675 GeneID:8618101 KEGG:ddi:DDB_G0271798
            OMA:RRTHKID Uniprot:Q55AP9
        Length = 836

 Score = 113 (44.8 bits), Expect = 7.4e-11, Sum P(3) = 7.4e-11
 Identities = 30/113 (26%), Positives = 52/113 (46%)

Query:   629 CFTCELENLILRAKDG-KSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVC 687
             C  CE++ L      G K P +P   L    +  +      ++DAHEF   +++ + S C
Sbjct:   419 CLGCEMDKLFTCVFSGVKFPFTPHHFLYSCWNYSNYFIGYEQQDAHEFFISSLNGIHSHC 478

Query:   688 IEEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEI 740
                 G       +D   +I  TFGG L+S++ C  C   S   +  +D++++I
Sbjct:   479 GGTTG-------KDCDCIIHCTFGGALKSEVSCLTCQFTSSTSDPFIDISLDI 524

 Score = 88 (36.0 bits), Expect = 7.4e-11, Sum P(3) = 7.4e-11
 Identities = 18/41 (43%), Positives = 24/41 (58%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKD 627
             GL N GN+C+ N +LQ     P L  YFL  +H  +C KK+
Sbjct:   251 GLNNLGNTCFMNSILQSFLHNPLLRNYFLSDMH--KCDKKN 289

 Score = 83 (34.3 bits), Expect = 7.4e-11, Sum P(3) = 7.4e-11
 Identities = 20/73 (27%), Positives = 35/73 (47%)

Query:   726 KSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVE 785
             + ++Q++        +     L   L R+T  E LD   KY C  C S +++ K+L+   
Sbjct:   599 QQQQQQQQQQQQQHQQQQNNTLLSCLERFTQPEKLD--EKYFCPNCNSKQESTKQLSFDT 656

Query:   786 APNILTIALKRFQ 798
              P ++   LKRF+
Sbjct:   657 LPMVICFHLKRFE 669

 Score = 60 (26.2 bits), Expect = 4.9e-08, Sum P(3) = 4.9e-08
 Identities = 25/108 (23%), Positives = 48/108 (44%)

Query:   501 VRSERFDNVQRSSAMSAQIENSPSNVGNGLKTSLWKAVDQFRGSKSSKQCLSVGCETAG- 559
             V+S     +  ++  S+   N+ +N      TS   +    + S S+ + + +  +  G 
Sbjct:     5 VKSYSVQPLPHNNNTSSTTTNTNTNTNINTNTSSSSSSPPIKKSISTCKHIDIYKQDGGS 64

Query:   560 -RYS--DKGLFSYELFVKLYNWNKVELQPCGLINCGNSCYANVVLQCL 604
              RY   +  +FSY+   KL N +K+    C + NC N    ++ L C+
Sbjct:    65 KRYEIIENYIFSYK--TKLINSDKLPTPYCMVCNCFNG-RLHICLHCV 109

 Score = 45 (20.9 bits), Expect = 1.5e-06, Sum P(3) = 1.5e-06
 Identities = 13/66 (19%), Positives = 29/66 (43%)

Query:   463 SNGLNISGGTSLRFEKSNIVTNDIGSSSNFVGMPSVPSVRSERFDNVQRSSAMSAQIENS 522
             +N  N +   +     +N   N+  +++N       P+++SE  D+       +  I+N+
Sbjct:   324 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNENSNDDNPNIKSEPIDDNNSEIVSTPPIQNN 383

Query:   523 PSNVGN 528
              +N  N
Sbjct:   384 NNNNSN 389


>UNIPROTKB|A2Q9N1 [details] [associations]
            symbol:creB "Probable ubiquitin carboxyl-terminal hydrolase
            creB" species:425011 "Aspergillus niger CBS 513.88" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISS] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=ISS]
            [GO:0045013 "carbon catabolite repression of transcription"
            evidence=ISS] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008234
            GenomeReviews:AM270980_GR GO:GO:0006511 GO:GO:0004221
            eggNOG:COG5533 HOGENOM:HOG000192482 KO:K11872 OrthoDB:EOG43XZCS
            GO:GO:0045013 EMBL:AM269976 RefSeq:XP_001389270.2 GeneID:4978128
            KEGG:ang:ANI_1_1130014 Uniprot:A2Q9N1
        Length = 758

 Score = 166 (63.5 bits), Expect = 7.6e-11, Sum P(3) = 7.6e-11
 Identities = 36/105 (34%), Positives = 59/105 (56%)

Query:   695 ASGPLEDETTL-IGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRR 753
             +SG     TT  +   F G L S+ +C  C   S+R E  +DL+V++E    ++   LR+
Sbjct:   262 SSGSKTPNTTRWVHELFEGTLTSETQCLTCENVSQRDEIFLDLSVDLEQH-SSVTSCLRK 320

Query:   754 YTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
             ++  E+L   NK+ CD C   ++A+K++ I   P IL + LKRF+
Sbjct:   321 FSAEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHLKRFK 365

 Score = 74 (31.1 bits), Expect = 7.6e-11, Sum P(3) = 7.6e-11
 Identities = 12/23 (52%), Positives = 17/23 (73%)

Query:   587 GLINCGNSCYANVVLQCLAFTPP 609
             G+ N GN+CY N +LQCL ++ P
Sbjct:    58 GMENYGNTCYCNSILQCLYYSVP 80

 Score = 39 (18.8 bits), Expect = 7.6e-11, Sum P(3) = 7.6e-11
 Identities = 9/32 (28%), Positives = 14/32 (43%)

Query:   650 PIGILSRLQSIGSQLGNGREEDAHEFLRYAID 681
             P   L  L+       +   +DAHEFL   ++
Sbjct:   199 PQHFLDVLRRENEMFRSAMHQDAHEFLNLVLN 230


>UNIPROTKB|Q0IIM6 [details] [associations]
            symbol:USP8 "Ubiquitin carboxyl-terminal hydrolase"
            species:9913 "Bos taurus" [GO:0071108 "protein K48-linked
            deubiquitination" evidence=IEA] [GO:0070536 "protein K63-linked
            deubiquitination" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
            [GO:0019897 "extrinsic to plasma membrane" evidence=IEA]
            [GO:0007265 "Ras protein signal transduction" evidence=IEA]
            [GO:0007032 "endosome organization" evidence=IEA] [GO:0005829
            "cytosol" evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
            [GO:0004843 "ubiquitin-specific protease activity" evidence=IEA]
            [GO:0000281 "cytokinesis after mitosis" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 Pfam:PF00581 GO:GO:0007265
            GO:GO:0019897 Gene3D:3.40.250.10 InterPro:IPR001763 SMART:SM00450
            SUPFAM:SSF52821 PROSITE:PS50206 GO:GO:0006511 GO:GO:0005769
            GO:GO:0071108 GO:GO:0070536 GO:GO:0004843 GO:GO:0004221
            eggNOG:COG5533 KO:K11839 GeneTree:ENSGT00670000097591
            MEROPS:C19.011 CTD:9101 HOGENOM:HOG000231497 HOVERGEN:HBG012631
            OMA:KINDQFA OrthoDB:EOG4XKV6B InterPro:IPR015063 Pfam:PF08969
            EMBL:DAAA02029069 EMBL:DAAA02029070 EMBL:BC122571 IPI:IPI00697060
            RefSeq:NP_001069594.1 UniGene:Bt.9664 SMR:Q0IIM6 STRING:Q0IIM6
            Ensembl:ENSBTAT00000033814 GeneID:538743 KEGG:bta:538743
            InParanoid:Q0IIM6 NextBio:20877551 Uniprot:Q0IIM6
        Length = 1085

 Score = 139 (54.0 bits), Expect = 9.3e-11, Sum P(2) = 9.3e-11
 Identities = 30/98 (30%), Positives = 53/98 (54%)

Query:   701 DETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIG-NLEEALRRYTGTEI 759
             +E+ ++ L F G  +S ++C  CH KS   E  M L++ +       L++ LR ++  E 
Sbjct:   885 NESIIVAL-FQGQFKSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEK 943

Query:   760 LDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             L   N++ C  C++   + KK+ I + P +L + LKRF
Sbjct:   944 LTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRF 981

 Score = 101 (40.6 bits), Expect = 9.3e-11, Sum P(2) = 9.3e-11
 Identities = 29/101 (28%), Positives = 47/101 (46%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCF----TCELENLILRAK 642
             GL N GN+CY N +LQCL  TP L  YF +  +  +  + +         E   +I++A 
Sbjct:   745 GLRNLGNTCYMNSILQCLCNTPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGIIMKAL 804

Query:   643 -DGKSP-LSPIGILSRLQSIGSQLGNGREEDAHEFLRYAID 681
               G+   +SP      +  I  Q     ++D+ E L + +D
Sbjct:   805 WTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMD 845


>UNIPROTKB|F1NS01 [details] [associations]
            symbol:USP12P1 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS50235 GO:GO:0006511
            GO:GO:0004221 GeneTree:ENSGT00650000093027 EMBL:AADN02013537
            IPI:IPI00583900 Ensembl:ENSGALT00000012527 ArrayExpress:F1NS01
            Uniprot:F1NS01
        Length = 192

 Score = 160 (61.4 bits), Expect = 1.1e-10, P = 1.1e-10
 Identities = 49/151 (32%), Positives = 71/151 (47%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTC--ELENLILRAKDG 644
             GL+N GN+CY N VLQ L F  P     L   +  +  KK+   TC  +L N I   K  
Sbjct:    40 GLVNFGNTCYCNSVLQALYFCRPFREKVLA--YKVQPRKKESLLTCLSDLFNSIATQKKK 97

Query:   645 KSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEA------GVNASGP 698
                + P   +SRL+       N  ++DAHEFL Y ++T+  +  EE       G   +G 
Sbjct:    98 VGVIPPKKFISRLRKENELFDNYMQQDAHEFLNYLLNTIADLLQEEKKQEKQNGKLQNGS 157

Query:   699 LE----DETTLIGL--TFGGYLRSKIKCTKC 723
             +E    D+T L  +   F G L ++ +C  C
Sbjct:   158 IESEEGDKTDLTWVHEIFQGTLTNETRCLNC 188


>FB|FBgn0038862 [details] [associations]
            symbol:Ubpy "UBPY ortholog" species:7227 "Drosophila
            melanogaster" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0090263 "positive regulation of
            canonical Wnt receptor signaling pathway" evidence=IMP] [GO:0008587
            "imaginal disc-derived wing margin morphogenesis" evidence=IMP]
            [GO:0005622 "intracellular" evidence=IDA] [GO:0045880 "positive
            regulation of smoothened signaling pathway" evidence=IGI]
            [GO:0016579 "protein deubiquitination" evidence=IMP] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IDA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 Pfam:PF00581 GO:GO:0005622
            Gene3D:3.40.250.10 InterPro:IPR001763 SUPFAM:SSF52821
            PROSITE:PS50206 GO:GO:0006511 GO:GO:0090263 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 GO:GO:0008587 GO:GO:0045880 HSSP:Q93009
            InterPro:IPR015063 Pfam:PF08969 EMBL:AY122247
            ProteinModelPortal:Q8MQX4 SMR:Q8MQX4 MEROPS:C19.A47 PRIDE:Q8MQX4
            UCSC:CG5798-RA FlyBase:FBgn0038862 InParanoid:Q8MQX4
            OrthoDB:EOG470RZ7 ArrayExpress:Q8MQX4 Bgee:Q8MQX4 Uniprot:Q8MQX4
        Length = 896

 Score = 185 (70.2 bits), Expect = 1.5e-10, P = 1.5e-10
 Identities = 68/229 (29%), Positives = 110/229 (48%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECA---KKDWCFTCELENLILRAKD 643
             GL N GN+CY N +LQCL+ TP LT Y +   +    +   K +     E+  LI    +
Sbjct:   564 GLKNLGNTCYMNSILQCLSNTPQLTEYCISDKYKNYISRSNKTNGQVIEEVAALIKELWN 623

Query:   644 GKSPLSPIGILSRLQSIGSQLGNG-REEDAHEFLRYAIDTMQS------VCIEEAGVNAS 696
             G+        L  +     ++  G  ++D+HEFL   +D + S      V  +   ++AS
Sbjct:   624 GQYKCVASRDLRYVVGQYQKIFRGVDQQDSHEFLTILMDWLHSDLQTLHVPRQREMISAS 683

Query:   697 GP--LE----DETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEA 750
                 LE     E+ ++ L F G ++S +KC  CH +S   E   +L++E+  +  N+ + 
Sbjct:   684 EKAWLEFTKAKESMILHL-FYGQMKSTVKCVACHKESATYESFSNLSLELPPN-SNVCQ- 740

Query:   751 LRRYTGTEILDGE--NKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             L +        GE  + +KC  CK+   A KKL I + P +L + LKRF
Sbjct:   741 LNQCMDM-YFSGERIHGWKCPSCKTKRDAIKKLDISKLPPVLVVHLKRF 788


>RGD|1588822 [details] [associations]
            symbol:Usp21 "ubiquitin specific peptidase 21" species:10116
            "Rattus norvegicus" [GO:0003713 "transcription coactivator
            activity" evidence=ISO;ISS] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=ISO;ISS] [GO:0004843 "ubiquitin-specific
            protease activity" evidence=ISO;ISS] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=ISO;ISS]
            [GO:0016578 "histone deubiquitination" evidence=ISO;ISS]
            [GO:0019784 "NEDD8-specific protease activity" evidence=ISO;ISS]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISO;ISS] [GO:0046872 "metal ion binding" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 RGD:1588822 GO:GO:0005634
            GO:GO:0005737 GO:GO:0045893 GO:GO:0046872 GO:GO:0006351
            GO:GO:0003713 GO:GO:0006511 GO:GO:0016578 GO:GO:0004843
            GO:GO:0004221 GO:GO:0019784 eggNOG:COG5533 CTD:27005
            HOVERGEN:HBG011164 KO:K11833 OrthoDB:EOG4229JD EMBL:BC166443
            IPI:IPI00896130 RefSeq:NP_001121110.1 UniGene:Rn.136743
            ProteinModelPortal:B2GUX4 PRIDE:B2GUX4 GeneID:688466
            KEGG:rno:688466 UCSC:RGD:1588822 NextBio:736555 ArrayExpress:B2GUX4
            Genevestigator:B2GUX4 Uniprot:B2GUX4
        Length = 565

 Score = 141 (54.7 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
 Identities = 38/104 (36%), Positives = 54/104 (51%)

Query:   699 LEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEI--EGDIG---NLEEALRR 753
             LE E + I   F G L+S +KC  C  +S   E   DL++ I  +G  G   +L +    
Sbjct:   363 LEREDSKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSL 422

Query:   754 YTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             +T  E L+ EN   CDRC+   ++ KKLT+   P IL + L RF
Sbjct:   423 FTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRF 466

 Score = 89 (36.4 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
 Identities = 34/122 (27%), Positives = 55/122 (45%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKEC--AKKDWCFTCELENLI--LRAK 642
             GL N GN+C+ N VLQCL+ T PL  + L+    +E     +    T    ++I  L   
Sbjct:   213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGALWHP 272

Query:   643 DGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAG-----VNASG 697
             D    ++P    +  Q          ++DA EFL+  ++ +  + I   G     + ASG
Sbjct:   273 DSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLH-LEINRRGRRAPPILASG 331

Query:   698 PL 699
             P+
Sbjct:   332 PV 333


>UNIPROTKB|E1BRT3 [details] [associations]
            symbol:USP40 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00630000089581 OMA:NLKPFCE EMBL:AADN02034442
            EMBL:AADN02034443 IPI:IPI00599112 Ensembl:ENSGALT00000006731
            Uniprot:E1BRT3
        Length = 1248

 Score = 186 (70.5 bits), Expect = 1.8e-10, P = 1.8e-10
 Identities = 63/217 (29%), Positives = 103/217 (47%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPL-TAYFLQGLHSKECAKKDWCFTCELENLILRAKDGK 645
             G+ N G +CY N +LQ L FTP       L  L  +E    D     + +  I+  +  +
Sbjct:    42 GIKNQGGTCYLNSLLQTLLFTPEFRVTEALFSLGPEELGTLDDVGKPDAKVRIIPLQLQR 101

Query:   646 SPLSPIGILSRLQSIGSQLGNGREEDAHEFLR-YAIDTMQSV---CIEEAGVNASGPLED 701
                + + +L +  +  + L      +++E +R + +  +  +    +E + V  SG   D
Sbjct:   102 L-FAQLLLLDQQAASTTDLTESFGWNSNEEMRQHDVQELNRILFSALETSLVGTSG--HD 158

Query:   702 ETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEAL-RRYTGTEIL 760
                LI   + G + ++I C +C   SERQE  +DLTV ++G +  LEEAL   Y   E  
Sbjct:   159 ---LINRLYHGTVVNQIVCKECKNISERQEDFLDLTVAVKG-VAGLEEALWNMYVEEEYF 214

Query:   761 DGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             + EN Y+C  C    +A K   + + P  LTI+L RF
Sbjct:   215 ENENLYRCGACDKLVEASKSAKLHKLPPFLTISLLRF 251


>MGI|MGI:1353665 [details] [associations]
            symbol:Usp21 "ubiquitin specific peptidase 21" species:10090
            "Mus musculus" [GO:0003713 "transcription coactivator activity"
            evidence=IDA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=ISO;IDA] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=ISO] [GO:0005634 "nucleus" evidence=IC]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0008233 "peptidase
            activity" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=ISO;IDA] [GO:0016568 "chromatin modification"
            evidence=IEA] [GO:0016578 "histone deubiquitination" evidence=IDA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0019784
            "NEDD8-specific protease activity" evidence=ISO] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=IDA]
            [GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 MGI:MGI:1353665 GO:GO:0005634 GO:GO:0005737
            GO:GO:0045893 GO:GO:0046872 GO:GO:0006351 GO:GO:0003713
            GO:GO:0006511 GO:GO:0016578 GO:GO:0004843 GO:GO:0004221
            GO:GO:0019784 eggNOG:COG5533 HOGENOM:HOG000231498 MEROPS:C19.034
            CTD:27005 HOVERGEN:HBG011164 KO:K11833 EMBL:AF177759 EMBL:AK011148
            EMBL:BC021903 IPI:IPI00830385 RefSeq:NP_038947.2 UniGene:Mm.27510
            ProteinModelPortal:Q9QZL6 SMR:Q9QZL6 STRING:Q9QZL6
            PhosphoSite:Q9QZL6 PRIDE:Q9QZL6 Ensembl:ENSMUST00000111306
            GeneID:30941 KEGG:mmu:30941 UCSC:uc011wwa.1
            GeneTree:ENSGT00670000098024 NextBio:307382 Bgee:Q9QZL6
            CleanEx:MM_USP21 Genevestigator:Q9QZL6
            GermOnline:ENSMUSG00000053483 Uniprot:Q9QZL6
        Length = 566

 Score = 141 (54.7 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
 Identities = 38/104 (36%), Positives = 54/104 (51%)

Query:   699 LEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEI--EGDIG---NLEEALRR 753
             LE E + I   F G L+S +KC  C  +S   E   DL++ I  +G  G   +L +    
Sbjct:   364 LEREDSKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSL 423

Query:   754 YTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             +T  E L+ EN   CDRC+   ++ KKLT+   P IL + L RF
Sbjct:   424 FTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRF 467

 Score = 89 (36.4 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
 Identities = 34/122 (27%), Positives = 55/122 (45%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKEC--AKKDWCFTCELENLI--LRAK 642
             GL N GN+C+ N VLQCL+ T PL  + L+    +E     +    T    ++I  L   
Sbjct:   213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGALWHP 272

Query:   643 DGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAG-----VNASG 697
             D    ++P    +  Q          ++DA EFL+  ++ +  + I   G     + ASG
Sbjct:   273 DSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERLH-LEINRRGRRAPPILASG 331

Query:   698 PL 699
             P+
Sbjct:   332 PV 333


>UNIPROTKB|F1RYL9 [details] [associations]
            symbol:USP8 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0071108 "protein K48-linked
            deubiquitination" evidence=IEA] [GO:0070536 "protein K63-linked
            deubiquitination" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
            [GO:0019897 "extrinsic to plasma membrane" evidence=IEA]
            [GO:0007265 "Ras protein signal transduction" evidence=IEA]
            [GO:0007032 "endosome organization" evidence=IEA] [GO:0005829
            "cytosol" evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
            [GO:0004843 "ubiquitin-specific protease activity" evidence=IEA]
            [GO:0000281 "cytokinesis after mitosis" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 Pfam:PF00581 GO:GO:0007265
            GO:GO:0019897 Gene3D:3.40.250.10 InterPro:IPR001763 SMART:SM00450
            SUPFAM:SSF52821 PROSITE:PS50206 GO:GO:0006511 GO:GO:0005769
            GO:GO:0071108 GO:GO:0070536 GO:GO:0004843 GO:GO:0004221
            GeneTree:ENSGT00670000097591 OMA:KINDQFA InterPro:IPR015063
            Pfam:PF08969 EMBL:CU469118 EMBL:CU582768 Ensembl:ENSSSCT00000005124
            Uniprot:F1RYL9
        Length = 1089

 Score = 139 (54.0 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
 Identities = 30/98 (30%), Positives = 53/98 (54%)

Query:   701 DETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIG-NLEEALRRYTGTEI 759
             +E+ ++ L F G  +S ++C  CH KS   E  M L++ +       L++ LR ++  E 
Sbjct:   889 NESIIVAL-FQGQFKSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEK 947

Query:   760 LDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             L   N++ C  C++   + KK+ I + P +L + LKRF
Sbjct:   948 LTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRF 985

 Score = 98 (39.6 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
 Identities = 28/101 (27%), Positives = 47/101 (46%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCF----TCELENLILRAK 642
             GL N GN+CY N +LQCL   P L  YF +  + ++  + +         E   +I++A 
Sbjct:   749 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQEDINRSNLLGHKGEVAEEFGIIMKAL 808

Query:   643 -DGKSP-LSPIGILSRLQSIGSQLGNGREEDAHEFLRYAID 681
               G+   +SP      +  I  Q     ++D+ E L + +D
Sbjct:   809 WTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMD 849


>UNIPROTKB|Q2UUG8 [details] [associations]
            symbol:creB "Probable ubiquitin carboxyl-terminal hydrolase
            creB" species:510516 "Aspergillus oryzae RIB40" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISS] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=ISS]
            [GO:0045013 "carbon catabolite repression of transcription"
            evidence=ISS] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008234
            GO:GO:0006511 GO:GO:0004221 eggNOG:COG5533 HOGENOM:HOG000192482
            OrthoDB:EOG43XZCS GO:GO:0045013 EMBL:AP007150 STRING:Q2UUG8
            EnsemblFungi:CADAORAT00003788 GenomeReviews:AP007150_GR
            Uniprot:Q2UUG8
        Length = 754

 Score = 164 (62.8 bits), Expect = 1.9e-10, Sum P(3) = 1.9e-10
 Identities = 36/105 (34%), Positives = 59/105 (56%)

Query:   695 ASGPLEDETTL-IGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRR 753
             +SG     TT  +   F G L S+ +C  C   S+R E  +DL+V++E    ++   LR+
Sbjct:   261 SSGSKTPNTTRWVHELFEGTLTSETQCLTCEKVSQRDEVFLDLSVDLEQH-SSVTSCLRK 319

Query:   754 YTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
             ++  E+L   NK+ CD C   ++A+K++ I   P IL + LKRF+
Sbjct:   320 FSAEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHLKRFK 364

 Score = 74 (31.1 bits), Expect = 1.9e-10, Sum P(3) = 1.9e-10
 Identities = 12/23 (52%), Positives = 17/23 (73%)

Query:   587 GLINCGNSCYANVVLQCLAFTPP 609
             G+ N GN+CY N +LQCL ++ P
Sbjct:    55 GMENYGNTCYCNSILQCLYYSVP 77

 Score = 37 (18.1 bits), Expect = 1.9e-10, Sum P(3) = 1.9e-10
 Identities = 14/36 (38%), Positives = 19/36 (52%)

Query:   670 EDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTL 705
             +DAHEFL   ++ +  V   EA   AS   E E +L
Sbjct:   216 QDAHEFLNLLLNEV--VANVEA--EASKQPEPERSL 247


>UNIPROTKB|B8NSV5 [details] [associations]
            symbol:creB "Probable ubiquitin carboxyl-terminal hydrolase
            creB" species:332952 "Aspergillus flavus NRRL3357" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISS] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=ISS]
            [GO:0045013 "carbon catabolite repression of transcription"
            evidence=ISS] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008234
            GO:GO:0006511 GO:GO:0004221 eggNOG:COG5533 HOGENOM:HOG000192482
            KO:K11872 GO:GO:0045013 EMBL:EQ963483 RefSeq:XP_002383274.1
            EnsemblFungi:CADAFLAT00011139 GeneID:7909143 KEGG:afv:AFLA_051480
            Uniprot:B8NSV5
        Length = 755

 Score = 164 (62.8 bits), Expect = 2.0e-10, Sum P(3) = 2.0e-10
 Identities = 36/105 (34%), Positives = 59/105 (56%)

Query:   695 ASGPLEDETTL-IGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRR 753
             +SG     TT  +   F G L S+ +C  C   S+R E  +DL+V++E    ++   LR+
Sbjct:   262 SSGSKTPNTTRWVHELFEGTLTSETQCLTCEKVSQRDEVFLDLSVDLEQH-SSVTSCLRK 320

Query:   754 YTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
             ++  E+L   NK+ CD C   ++A+K++ I   P IL + LKRF+
Sbjct:   321 FSAEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHLKRFK 365

 Score = 74 (31.1 bits), Expect = 2.0e-10, Sum P(3) = 2.0e-10
 Identities = 12/23 (52%), Positives = 17/23 (73%)

Query:   587 GLINCGNSCYANVVLQCLAFTPP 609
             G+ N GN+CY N +LQCL ++ P
Sbjct:    56 GMENYGNTCYCNSILQCLYYSVP 78

 Score = 37 (18.1 bits), Expect = 2.0e-10, Sum P(3) = 2.0e-10
 Identities = 14/36 (38%), Positives = 19/36 (52%)

Query:   670 EDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTL 705
             +DAHEFL   ++ +  V   EA   AS   E E +L
Sbjct:   217 QDAHEFLNLLLNEV--VANVEA--EASKQPEPERSL 248


>UNIPROTKB|F1MH36 [details] [associations]
            symbol:USP21 "Ubiquitin carboxyl-terminal hydrolase"
            species:9913 "Bos taurus" [GO:0019784 "NEDD8-specific protease
            activity" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0006511 GO:GO:0004843 GO:GO:0004221
            GO:GO:0019784 IPI:IPI00715496 UniGene:Bt.24990 OMA:NVQPRVG
            GeneTree:ENSGT00670000098024 EMBL:DAAA02006959
            Ensembl:ENSBTAT00000029184 Uniprot:F1MH36
        Length = 565

 Score = 142 (55.0 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
 Identities = 38/104 (36%), Positives = 54/104 (51%)

Query:   699 LEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEI--EGDIG---NLEEALRR 753
             LE E + I   F G L+S +KC  C  +S   E   DL++ I  +G  G   +L +    
Sbjct:   363 LEREDSKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNL 422

Query:   754 YTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             +T  E L+ EN   CDRC+   ++ KKLT+   P IL + L RF
Sbjct:   423 FTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRF 466

 Score = 87 (35.7 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
 Identities = 28/101 (27%), Positives = 46/101 (45%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKEC--AKKDWCFTCELENLI--LRAK 642
             GL N GN+C+ N VLQCL+ T PL  + L+    +E     +    T    ++I  L   
Sbjct:   213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGALWHP 272

Query:   643 DGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTM 683
             D    ++P    +  Q          ++DA EFL+  ++ +
Sbjct:   273 DSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERL 313


>UNIPROTKB|Q9UK80 [details] [associations]
            symbol:USP21 "Ubiquitin carboxyl-terminal hydrolase 21"
            species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS;IDA;TAS] [GO:0006464 "cellular
            protein modification process" evidence=NAS] [GO:0008234
            "cysteine-type peptidase activity" evidence=ISS;IMP] [GO:0003713
            "transcription coactivator activity" evidence=ISS] [GO:0016578
            "histone deubiquitination" evidence=ISS] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0019784 "NEDD8-specific protease activity" evidence=IDA]
            [GO:0004843 "ubiquitin-specific protease activity" evidence=IDA]
            [GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893
            GO:GO:0046872 GO:GO:0006351 GO:GO:0003713 GO:GO:0006511
            EMBL:CH471121 EMBL:AL590714 GO:GO:0016578 GO:GO:0004843
            GO:GO:0004221 GO:GO:0019784 eggNOG:COG5533 PDB:2Y5B PDB:3I3T
            PDB:3MTN PDBsum:2Y5B PDBsum:3I3T PDBsum:3MTN MEROPS:C19.034
            CTD:27005 HOVERGEN:HBG011164 KO:K11833 OrthoDB:EOG4229JD
            EMBL:AF177758 EMBL:AF233442 EMBL:AK292319 EMBL:AF217979
            EMBL:AB208899 EMBL:BC003130 EMBL:BC090946 EMBL:BC136291
            IPI:IPI00007262 IPI:IPI00376946 IPI:IPI00873033
            RefSeq:NP_001014443.1 RefSeq:NP_036607.3 UniGene:Hs.8015
            ProteinModelPortal:Q9UK80 SMR:Q9UK80 IntAct:Q9UK80 STRING:Q9UK80
            PhosphoSite:Q9UK80 DMDM:10720334 PRIDE:Q9UK80
            Ensembl:ENST00000289865 Ensembl:ENST00000368001
            Ensembl:ENST00000368002 GeneID:27005 KEGG:hsa:27005 UCSC:uc010pkc.2
            GeneCards:GC01P161129 HGNC:HGNC:12620 HPA:HPA028397 MIM:604729
            neXtProt:NX_Q9UK80 PharmGKB:PA37246 OMA:NVQPRVG BRENDA:3.1.2.15
            EvolutionaryTrace:Q9UK80 GenomeRNAi:27005 NextBio:49506
            PMAP-CutDB:Q9UK80 Bgee:Q9UK80 CleanEx:HS_USP21
            Genevestigator:Q9UK80 GermOnline:ENSG00000143258 Uniprot:Q9UK80
        Length = 565

 Score = 142 (55.0 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
 Identities = 38/104 (36%), Positives = 54/104 (51%)

Query:   699 LEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEI--EGDIG---NLEEALRR 753
             LE E + I   F G L+S +KC  C  +S   E   DL++ I  +G  G   +L +    
Sbjct:   363 LEREDSKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNL 422

Query:   754 YTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             +T  E L+ EN   CDRC+   ++ KKLT+   P IL + L RF
Sbjct:   423 FTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRF 466

 Score = 87 (35.7 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
 Identities = 28/101 (27%), Positives = 46/101 (45%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKEC--AKKDWCFTCELENLI--LRAK 642
             GL N GN+C+ N VLQCL+ T PL  + L+    +E     +    T    ++I  L   
Sbjct:   213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGALWHP 272

Query:   643 DGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTM 683
             D    ++P    +  Q          ++DA EFL+  ++ +
Sbjct:   273 DSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERL 313


>SGD|S000005130 [details] [associations]
            symbol:UBP10 "Ubiquitin-specific protease, deubiquitinates
            Ub-protein moieties" species:4932 "Saccharomyces cerevisiae"
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0000781 "chromosome, telomeric region" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IDA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0006348 "chromatin silencing at
            telomere" evidence=IMP] [GO:0016579 "protein deubiquitination"
            evidence=IMP;IDA;TAS] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
            [GO:0005694 "chromosome" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 SGD:S000005130 GO:GO:0005634 EMBL:BK006947
            GO:GO:0006348 GO:GO:0006511 GO:GO:0000781 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 eggNOG:COG5533 EMBL:Z71462 PIR:S63141
            RefSeq:NP_014213.2 ProteinModelPortal:P53874 SMR:P53874
            DIP:DIP-6664N IntAct:P53874 MINT:MINT-643556 STRING:P53874
            MEROPS:C19.088 PaxDb:P53874 PeptideAtlas:P53874
            EnsemblFungi:YNL186W GeneID:855535 KEGG:sce:YNL186W CYGD:YNL186w
            GeneTree:ENSGT00600000085270 HOGENOM:HOG000248158 KO:K11873
            OMA:YVCEKCH OrthoDB:EOG4JHGQN NextBio:979592 Genevestigator:P53874
            GermOnline:YNL186W Uniprot:P53874
        Length = 792

 Score = 152 (58.6 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
 Identities = 47/194 (24%), Positives = 87/194 (44%)

Query:   562 SDKGLFSYELFVKLYNWNK--VELQPCGLINCGNSCYANVVLQCLAFTPPLTAYF---LQ 616
             +D+G  +    VK  NW      L+P GL+N G +CY N  +Q +   P +  Y    L 
Sbjct:   338 NDRGSLNSTRIVK--NWGDKFTNLKPRGLLNHGVTCYTNAAVQAMLHIPSIQHYLFDILM 395

Query:   617 GLHSKECAKKDWCFTCELENLILRAKDGKSP--------LSPIGILSRLQSIGSQLGNGR 668
             G +    +K    +T    +  +     K+P        ++P  ++SRL  I   +   +
Sbjct:   396 GKYDSTISKNSVSYTLAETSKKMWLPVSKNPRKNVSASYINPKHLISRLDDINCMMSEWQ 455

Query:   669 EEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSE 728
             +ED+HE+    +  +Q    E++       +E   ++I   FGG L+  + C  C   S+
Sbjct:   456 QEDSHEYFMSLMSRLQ----EDSVPKGHKLIE---SIIYDIFGGLLKQIVTCKSCGSISK 508

Query:   729 RQERMMDLTVEIEG 742
              ++   DL++ ++G
Sbjct:   509 TEQPFYDLSLHLKG 522

 Score = 80 (33.2 bits), Expect = 2.5e-10, Sum P(2) = 2.5e-10
 Identities = 17/56 (30%), Positives = 33/56 (58%)

Query:   746 NLEEALRRYTGTEIL--DGENK-YKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
             ++E++++ +   E++  D E K Y C++C     A K  +I+ AP  L + LK+F+
Sbjct:   585 SIEKSIKDFFNPELIKVDKEQKGYVCEKCHKTTNAVKHSSILRAPETLLVHLKKFR 640


>UNIPROTKB|A7Z056 [details] [associations]
            symbol:USP20 "Ubiquitin carboxyl-terminal hydrolase 20"
            species:9913 "Bos taurus" [GO:0016579 "protein deubiquitination"
            evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=ISS] [GO:0070536 "protein K63-linked deubiquitination"
            evidence=ISS] [GO:0008277 "regulation of G-protein coupled receptor
            protein signaling pathway" evidence=ISS] [GO:0004197 "cysteine-type
            endopeptidase activity" evidence=ISS] [GO:0071108 "protein
            K48-linked deubiquitination" evidence=ISS] [GO:0048471 "perinuclear
            region of cytoplasm" evidence=IEA] [GO:0001664 "G-protein coupled
            receptor binding" evidence=IEA] [GO:0006897 "endocytosis"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 GO:GO:0048471
            GO:GO:0046872 GO:GO:0008270 GO:GO:0006897 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277 GO:GO:0071108
            GO:GO:0070536 GO:GO:0004197 GO:GO:0004221 eggNOG:COG5560
            EMBL:BC153254 IPI:IPI00700030 RefSeq:NP_001098803.1
            UniGene:Bt.26746 ProteinModelPortal:A7Z056 SMR:A7Z056 STRING:A7Z056
            PRIDE:A7Z056 Ensembl:ENSBTAT00000027070 GeneID:505839
            KEGG:bta:505839 CTD:10868 GeneTree:ENSGT00690000101718
            HOGENOM:HOG000286031 HOVERGEN:HBG054196 InParanoid:A7Z056 KO:K11848
            OMA:ADYGQIS OrthoDB:EOG4D52WZ NextBio:20867329 ArrayExpress:A7Z056
            Uniprot:A7Z056
        Length = 912

 Score = 113 (44.8 bits), Expect = 2.5e-10, Sum P(3) = 2.5e-10
 Identities = 37/126 (29%), Positives = 56/126 (44%)

Query:   582 ELQPCGLI---NCGNSCYANVVLQCLAFTPPLTAYFLQ--GLHSKECAKKDWCFTCELEN 636
             +L+P GL    N GNSCY N  LQ L+  PPLT +FL+  GL   +  K   C +   + 
Sbjct:   138 DLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTD-KKPALCKS--YQK 194

Query:   637 LILRAKDGKSP--LSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVN 694
             L+      K P  + P  +   ++ +        ++D  EFLR  +D +     E     
Sbjct:   195 LVSEVWHRKRPSYVVPTSLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEELKEPVVAT 254

Query:   695 ASGPLE 700
             A+   E
Sbjct:   255 AAALTE 260

 Score = 109 (43.4 bits), Expect = 2.5e-10, Sum P(3) = 2.5e-10
 Identities = 21/57 (36%), Positives = 30/57 (52%)

Query:   742 GDIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
             G +  LE+ L  +   + L G+N Y C+RCK      K   ++  P IL I LKRF+
Sbjct:   532 GPVVTLEDCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFR 588

 Score = 58 (25.5 bits), Expect = 2.5e-10, Sum P(3) = 2.5e-10
 Identities = 18/68 (26%), Positives = 34/68 (50%)

Query:   688 IEEAGVNASGPLEDET--TLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEG--D 743
             +++A V  S   ++++  ++I   F G + S ++C  C   S   E   DL++ I G  D
Sbjct:   423 LKKAQVPGSRRRKEQSYRSVISDIFDGSVLSLVQCLTCDRVSTTVETFQDLSLPIPGKED 482

Query:   744 IGNLEEAL 751
             +  L  A+
Sbjct:   483 LAKLHSAI 490


>UNIPROTKB|B4DKA8 [details] [associations]
            symbol:USP8 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 Pfam:PF00581 GO:GO:0008234 Gene3D:3.40.250.10
            InterPro:IPR001763 SMART:SM00450 SUPFAM:SSF52821 PROSITE:PS50206
            GO:GO:0006511 GO:GO:0004221 UniGene:Hs.443731 HGNC:HGNC:12631
            HOGENOM:HOG000231497 HOVERGEN:HBG012631 ChiTaRS:USP8
            InterPro:IPR015063 Pfam:PF08969 EMBL:AC012170 EMBL:AK296480
            IPI:IPI00941811 SMR:B4DKA8 STRING:B4DKA8 Ensembl:ENST00000425032
            UCSC:uc010ufh.2 Uniprot:B4DKA8
        Length = 1012

 Score = 139 (54.0 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
 Identities = 30/98 (30%), Positives = 53/98 (54%)

Query:   701 DETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIG-NLEEALRRYTGTEI 759
             +E+ ++ L F G  +S ++C  CH KS   E  M L++ +       L++ LR ++  E 
Sbjct:   812 NESIIVAL-FQGQFKSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEK 870

Query:   760 LDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             L   N++ C  C++   + KK+ I + P +L + LKRF
Sbjct:   871 LTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRF 908

 Score = 96 (38.9 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
 Identities = 28/101 (27%), Positives = 46/101 (45%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCF----TCELENLILRAK 642
             GL N GN+CY N +LQCL   P L  YF +  +  +  + +         E   +I++A 
Sbjct:   672 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGIIMKAL 731

Query:   643 -DGKSP-LSPIGILSRLQSIGSQLGNGREEDAHEFLRYAID 681
               G+   +SP      +  I  Q     ++D+ E L + +D
Sbjct:   732 WTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMD 772


>UNIPROTKB|E2RGE7 [details] [associations]
            symbol:USP21 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0019784 "NEDD8-specific
            protease activity" evidence=IEA] [GO:0004843 "ubiquitin-specific
            protease activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0006511 GO:GO:0004843 GO:GO:0004221
            GO:GO:0019784 CTD:27005 KO:K11833 OMA:NVQPRVG
            GeneTree:ENSGT00670000098024 EMBL:AAEX03018447 EMBL:AAEX03018448
            RefSeq:XP_536136.3 ProteinModelPortal:E2RGE7
            Ensembl:ENSCAFT00000020298 GeneID:478979 KEGG:cfa:478979
            NextBio:20854234 Uniprot:E2RGE7
        Length = 565

 Score = 141 (54.7 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
 Identities = 38/104 (36%), Positives = 54/104 (51%)

Query:   699 LEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEI--EGDIG---NLEEALRR 753
             LE E + I   F G L+S +KC  C  +S   E   DL++ I  +G  G   +L +    
Sbjct:   363 LEREDSKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSL 422

Query:   754 YTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             +T  E L+ EN   CDRC+   ++ KKLT+   P IL + L RF
Sbjct:   423 FTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRF 466

 Score = 87 (35.7 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
 Identities = 28/101 (27%), Positives = 46/101 (45%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKEC--AKKDWCFTCELENLI--LRAK 642
             GL N GN+C+ N VLQCL+ T PL  + L+    +E     +    T    ++I  L   
Sbjct:   213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGALWHP 272

Query:   643 DGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTM 683
             D    ++P    +  Q          ++DA EFL+  ++ +
Sbjct:   273 DSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERL 313


>UNIPROTKB|F1S196 [details] [associations]
            symbol:USP21 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0019784 "NEDD8-specific protease
            activity" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0006511 GO:GO:0004843 GO:GO:0004221
            GO:GO:0019784 KO:K11833 OMA:NVQPRVG GeneTree:ENSGT00670000098024
            EMBL:CU463216 RefSeq:XP_001927817.1 UniGene:Ssc.6203
            Ensembl:ENSSSCT00000006971 GeneID:100152455 KEGG:ssc:100152455
            Uniprot:F1S196
        Length = 565

 Score = 141 (54.7 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
 Identities = 38/104 (36%), Positives = 54/104 (51%)

Query:   699 LEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEI--EGDIG---NLEEALRR 753
             LE E + I   F G L+S +KC  C  +S   E   DL++ I  +G  G   +L +    
Sbjct:   363 LEREDSKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFSL 422

Query:   754 YTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             +T  E L+ EN   CDRC+   ++ KKLT+   P IL + L RF
Sbjct:   423 FTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRF 466

 Score = 87 (35.7 bits), Expect = 2.9e-10, Sum P(2) = 2.9e-10
 Identities = 28/101 (27%), Positives = 46/101 (45%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKEC--AKKDWCFTCELENLI--LRAK 642
             GL N GN+C+ N VLQCL+ T PL  + L+    +E     +    T    ++I  L   
Sbjct:   213 GLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGALWHP 272

Query:   643 DGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTM 683
             D    ++P    +  Q          ++DA EFL+  ++ +
Sbjct:   273 DSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERL 313


>UNIPROTKB|E2RH35 [details] [associations]
            symbol:USP8 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 Pfam:PF00581 GO:GO:0008234 Gene3D:3.40.250.10
            InterPro:IPR001763 SMART:SM00450 SUPFAM:SSF52821 PROSITE:PS50206
            GO:GO:0006511 GO:GO:0004221 KO:K11839 GeneTree:ENSGT00670000097591
            CTD:9101 OMA:KINDQFA InterPro:IPR015063 Pfam:PF08969
            EMBL:AAEX03016119 RefSeq:XP_535474.1 Ensembl:ENSCAFT00000024054
            GeneID:478299 KEGG:cfa:478299 Uniprot:E2RH35
        Length = 1116

 Score = 139 (54.0 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
 Identities = 30/98 (30%), Positives = 53/98 (54%)

Query:   701 DETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIG-NLEEALRRYTGTEI 759
             +E+ ++ L F G  +S ++C  CH KS   E  M L++ +       L++ LR ++  E 
Sbjct:   916 NESIIVAL-FQGQFKSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEK 974

Query:   760 LDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             L   N++ C  C++   + KK+ I + P +L + LKRF
Sbjct:   975 LTDNNRFYCSHCRTRRDSLKKIEIWKLPPVLLVHLKRF 1012

 Score = 96 (38.9 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
 Identities = 28/101 (27%), Positives = 46/101 (45%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCF----TCELENLILRAK 642
             GL N GN+CY N +LQCL   P L  YF +  +  +  + +         E   +I++A 
Sbjct:   776 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGIIMKAL 835

Query:   643 -DGKSP-LSPIGILSRLQSIGSQLGNGREEDAHEFLRYAID 681
               G+   +SP      +  I  Q     ++D+ E L + +D
Sbjct:   836 WTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMD 876


>UNIPROTKB|P40818 [details] [associations]
            symbol:USP8 "Ubiquitin carboxyl-terminal hydrolase 8"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0017124 "SH3 domain binding"
            evidence=IEA] [GO:0007265 "Ras protein signal transduction"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0010008
            "endosome membrane" evidence=IEA] [GO:0004843 "ubiquitin-specific
            protease activity" evidence=IDA] [GO:0005769 "early endosome"
            evidence=IDA] [GO:0007032 "endosome organization" evidence=IMP]
            [GO:0071108 "protein K48-linked deubiquitination" evidence=IDA]
            [GO:0070536 "protein K63-linked deubiquitination" evidence=IDA]
            [GO:0005829 "cytosol" evidence=IDA;TAS] [GO:0019897 "extrinsic to
            plasma membrane" evidence=IDA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=TAS] [GO:0008283 "cell proliferation" evidence=TAS]
            [GO:0000281 "cytokinesis after mitosis" evidence=IMP] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0016579 "protein deubiquitination"
            evidence=IMP] [GO:0030496 "midbody" evidence=IDA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 Pfam:PF00581 GO:GO:0005829
            GO:GO:0005634 Reactome:REACT_111102 GO:GO:0007265 GO:GO:0008283
            GO:GO:0019897 GO:GO:0010008 Gene3D:3.40.250.10 InterPro:IPR001763
            SMART:SM00450 SUPFAM:SSF52821 PROSITE:PS50206 GO:GO:0000281
            GO:GO:0006511 GO:GO:0030496 GO:GO:0007032 GO:GO:0005769
            GO:GO:0071108 GO:GO:0070536 GO:GO:0004197 GO:GO:0004843
            GO:GO:0004221 eggNOG:COG5533 PDB:2GWF PDBsum:2GWF KO:K11839
            PDB:3N3K PDBsum:3N3K BRENDA:3.1.2.15 EMBL:D29956 EMBL:BX537420
            EMBL:BC038801 EMBL:BC051345 EMBL:BC110590 IPI:IPI00030915
            RefSeq:NP_001122082.1 RefSeq:NP_001122083.1 RefSeq:NP_005145.3
            UniGene:Hs.443731 PDB:1WHB PDB:2A9U PDB:2GFO PDBsum:1WHB
            PDBsum:2A9U PDBsum:2GFO ProteinModelPortal:P40818 SMR:P40818
            DIP:DIP-40365N IntAct:P40818 MINT:MINT-244406 STRING:P40818
            MEROPS:C19.011 PhosphoSite:P40818 DMDM:731046 PaxDb:P40818
            PeptideAtlas:P40818 PRIDE:P40818 Ensembl:ENST00000307179
            Ensembl:ENST00000396444 Ensembl:ENST00000433963 GeneID:9101
            KEGG:hsa:9101 UCSC:uc001zyl.4 CTD:9101 GeneCards:GC15P050716
            H-InvDB:HIX0172812 HGNC:HGNC:12631 HPA:HPA004869 MIM:603158
            neXtProt:NX_P40818 PharmGKB:PA37256 HOGENOM:HOG000231497
            HOVERGEN:HBG012631 InParanoid:P40818 OMA:KINDQFA OrthoDB:EOG4XKV6B
            PhylomeDB:P40818 ChiTaRS:USP8 EvolutionaryTrace:P40818
            GenomeRNAi:9101 NextBio:34117 ArrayExpress:P40818 Bgee:P40818
            CleanEx:HS_USP8 Genevestigator:P40818 GermOnline:ENSG00000138592
            InterPro:IPR015063 Pfam:PF08969 Uniprot:P40818
        Length = 1118

 Score = 139 (54.0 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
 Identities = 30/98 (30%), Positives = 53/98 (54%)

Query:   701 DETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIG-NLEEALRRYTGTEI 759
             +E+ ++ L F G  +S ++C  CH KS   E  M L++ +       L++ LR ++  E 
Sbjct:   918 NESIIVAL-FQGQFKSTVQCLTCHKKSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEK 976

Query:   760 LDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             L   N++ C  C++   + KK+ I + P +L + LKRF
Sbjct:   977 LTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRF 1014

 Score = 96 (38.9 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
 Identities = 28/101 (27%), Positives = 46/101 (45%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCF----TCELENLILRAK 642
             GL N GN+CY N +LQCL   P L  YF +  +  +  + +         E   +I++A 
Sbjct:   778 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGIIMKAL 837

Query:   643 -DGKSP-LSPIGILSRLQSIGSQLGNGREEDAHEFLRYAID 681
               G+   +SP      +  I  Q     ++D+ E L + +D
Sbjct:   838 WTGQYRYISPKDFKITIGKINDQFAGYSQQDSQELLLFLMD 878


>UNIPROTKB|E1BKD2 [details] [associations]
            symbol:USP40 "Ubiquitin carboxyl-terminal hydrolase"
            species:9913 "Bos taurus" [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00630000089581 OMA:NLKPFCE EMBL:DAAA02009280
            IPI:IPI00700563 Ensembl:ENSBTAT00000000172 Uniprot:E1BKD2
        Length = 1233

 Score = 183 (69.5 bits), Expect = 3.7e-10, P = 3.7e-10
 Identities = 69/223 (30%), Positives = 99/223 (44%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLT-AYFLQGLHS----KECAKKDW---CFTCELENLI 638
             G+ N G +CY N +LQ L FTP    A F  GL      ++  K D        +L+ L 
Sbjct:    41 GIRNQGGTCYLNSLLQTLHFTPEFREALFSLGLEELGSLEDKDKPDAKVRIIPLQLQRLF 100

Query:   639 --LRAKDGKSPLSPIGILSRLQSIG-SQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNA 695
               L   D K+    +       S G +     R+ D  E  R     +     E + V  
Sbjct:   101 AQLLLLDQKA----VSTADLTDSFGWTSDEEMRQHDVQELNRILFSAL-----ETSLVGT 151

Query:   696 SGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEAL-RRY 754
             SG   D   LI   + G + ++I C +C   SE+QE  +DLTV ++ ++  LE+AL   Y
Sbjct:   152 SG--HD---LINRLYHGTIVNQIVCKECKNVSEKQEDFLDLTVAVK-NVSGLEDALWNMY 205

Query:   755 TGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
                E+ D +N Y C  C    KA K   + + P  LTI+L RF
Sbjct:   206 VEEEVFDCDNLYHCGNCDRLVKAAKSAKLRKLPPFLTISLLRF 248


>RGD|1308852 [details] [associations]
            symbol:Usp3 "ubiquitin specific peptidase 3" species:10116
            "Rattus norvegicus" [GO:0000278 "mitotic cell cycle" evidence=ISO]
            [GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISO] [GO:0006281 "DNA
            repair" evidence=ISO] [GO:0016578 "histone deubiquitination"
            evidence=ISO] [GO:0031647 "regulation of protein stability"
            evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS50271 RGD:1308852 GO:GO:0046872
            GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0004221 MEROPS:C19.026 CTD:9960
            HOVERGEN:HBG103589 KO:K11986 IPI:IPI00366664 EMBL:DQ076481
            RefSeq:NP_001020595.1 UniGene:Rn.164920 ProteinModelPortal:Q4JL29
            GeneID:363084 KEGG:rno:363084 UCSC:RGD:1308852 NextBio:682386
            Genevestigator:Q4JL29 Uniprot:Q4JL29
        Length = 520

 Score = 141 (54.7 bits), Expect = 3.8e-10, Sum P(3) = 3.8e-10
 Identities = 33/108 (30%), Positives = 56/108 (51%)

Query:   703 TTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEI-------------EGDIGNLEE 749
             +T++   FGG L++++ C  C  +S + +  +DL+++I              G + +L +
Sbjct:   307 STVVTTIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRSKRSKNQENGPVCSLRD 366

Query:   750 ALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
              LR +T  E LD    Y C +CK  +K+ KK  I + P  L + LKRF
Sbjct:   367 CLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKALCLHLKRF 414

 Score = 88 (36.0 bits), Expect = 3.8e-10, Sum P(3) = 3.8e-10
 Identities = 39/152 (25%), Positives = 59/152 (38%)

Query:   549 QCLSVGCETAGRYSDKGLF-SYELFVKLYNWNKVELQPC--GLINCGNSCYANVVLQCLA 605
             Q L     TA R+  + L  +  L  KL   N      C  GL N GN+C+ N +LQ L+
Sbjct:   119 QSLENSAFTADRHRKRKLLENSSLNSKLLKVNGSTAAICATGLRNLGNTCFMNAILQSLS 178

Query:   606 FTPPLTAYFLQ------------G---LHSKECAKKDWCFTCELENLILRAKDG-KSPLS 649
                    YF +            G    H++     +     E    +     G ++  S
Sbjct:   179 NIEQFCCYFKELPAVELRNGKTAGRRTYHTRSQGDSNVSLVEEFRKTLCALWQGSQTAFS 238

Query:   650 PIGILSRLQSIGSQLGNGREEDAHEFLRYAID 681
             P  +   +  I       R++DAHEF+RY +D
Sbjct:   239 PESLFYVVWKIMPNFRGYRQQDAHEFMRYLLD 270

 Score = 38 (18.4 bits), Expect = 3.8e-10, Sum P(3) = 3.8e-10
 Identities = 12/34 (35%), Positives = 15/34 (44%)

Query:   528 NGLKTSLWKAVDQFRGSKSSKQCLSVGCETAGRY 561
             NG  +S W      R +KS   CL+      GRY
Sbjct:    21 NGSPSS-W-CCSVCRSNKSPWVCLTCSSVLCGRY 52


>UNIPROTKB|H7C189 [details] [associations]
            symbol:USP4 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            EMBL:AC121247 HGNC:HGNC:12627 ChiTaRS:USP4
            ProteinModelPortal:H7C189 Ensembl:ENST00000431357 Uniprot:H7C189
        Length = 621

 Score = 139 (54.0 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
 Identities = 43/153 (28%), Positives = 75/153 (49%)

Query:   583 LQP--CGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWC-FTCELEN--- 636
             +QP  CGL N GN+C+ N  LQCL+ T PLT YFL+  +  E  + +      E+     
Sbjct:    54 IQPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYA 113

Query:   637 -LILRAKDGKSP-LSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQS----VCIEE 690
              LI +   G+   ++P    +++     Q    +++D+ E L + +D +      V  +E
Sbjct:   114 ELIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQQDSQELLAFLLDGLHEDLNRVVAKE 173

Query:   691 AGVNASGPLEDETTLIGLTFGGYLRSKIKCTKC 723
             A  N    L +++ ++  TF G  +S + C +C
Sbjct:   174 AWENHR--LRNDSVIVD-TFHGLFKSTLVCPEC 203

 Score = 89 (36.4 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
 Identities = 17/51 (33%), Positives = 27/51 (52%)

Query:   747 LEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             L + +  +T  E L   + + C  CK +++A KK  +   P IL + LKRF
Sbjct:   517 LRDCIELFTTMETLGEHDPWYCPNCKKHQQATKKFDLWSLPKILVVHLKRF 567

 Score = 40 (19.1 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
 Identities = 9/21 (42%), Positives = 14/21 (66%)

Query:   736 LTVEIEGDIGNLEEALRRYTG 756
             +TV + G + +L EAL R +G
Sbjct:   246 VTVPLMGAVSDLCEALSRLSG 266


>UNIPROTKB|F1P4F0 [details] [associations]
            symbol:USP20 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0001664 "G-protein coupled receptor
            binding" evidence=IEA] [GO:0004197 "cysteine-type endopeptidase
            activity" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0008277 "regulation of G-protein
            coupled receptor protein signaling pathway" evidence=IEA]
            [GO:0070536 "protein K63-linked deubiquitination" evidence=IEA]
            [GO:0071108 "protein K48-linked deubiquitination" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            PROSITE:PS51283 SMART:SM00695 GO:GO:0046872 GO:GO:0008270
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277
            GO:GO:0071108 GO:GO:0070536 GO:GO:0004197 GO:GO:0004221
            GeneTree:ENSGT00690000101718 OMA:ADYGQIS EMBL:AADN02026599
            EMBL:AADN02026598 IPI:IPI00581772 Ensembl:ENSGALT00000006585
            Uniprot:F1P4F0
        Length = 903

 Score = 111 (44.1 bits), Expect = 4.0e-10, Sum P(3) = 4.0e-10
 Identities = 34/109 (31%), Positives = 52/109 (47%)

Query:   582 ELQPCGLI---NCGNSCYANVVLQCLAFTPPLTAYFLQ--GLHSKECAKKDWCFTCELEN 636
             +L+P GL    N GNSCY N  LQ L+  PPLT +FL+  GL   +  K   C +   + 
Sbjct:   133 DLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTD-KKPALCKS--YQK 189

Query:   637 LILRAKDGKSP--LSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTM 683
             L+      K P  + P  +   ++ +        ++D  EFLR  +D +
Sbjct:   190 LVSEVWHKKRPSYVVPSSLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQL 238

 Score = 98 (39.6 bits), Expect = 4.0e-10, Sum P(3) = 4.0e-10
 Identities = 21/59 (35%), Positives = 30/59 (50%)

Query:   742 GDIGNLEEALRRYTGTEILD--GENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
             G +  LE+ L  +   + L   G+N Y C+RCK      K   ++  P IL I LKRF+
Sbjct:   521 GPVVTLEDCLAAFFAADELKAIGDNMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFR 579

 Score = 69 (29.3 bits), Expect = 4.0e-10, Sum P(3) = 4.0e-10
 Identities = 21/72 (29%), Positives = 35/72 (48%)

Query:   685 SVCIEEAGVNASGPLEDET---TLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIE 741
             S  +++A + ASG  + E    ++I   F G + S ++C  C   S   E   DL++ I 
Sbjct:   408 SYVLKKAQMQASGKKKKELRYRSVISDIFDGSILSLVQCLTCDRVSTTVETFQDLSLPIP 467

Query:   742 G--DIGNLEEAL 751
             G  D+  L  A+
Sbjct:   468 GKEDLAKLHSAI 479


>UNIPROTKB|A1A5G2 [details] [associations]
            symbol:usp47 "Ubiquitin carboxyl-terminal hydrolase 47"
            species:8364 "Xenopus (Silurana) tropicalis" [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISS] [GO:0005737
            "cytoplasm" evidence=ISS] [GO:0006284 "base-excision repair"
            evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
            evidence=ISS] [GO:0035520 "monoubiquitinated protein
            deubiquitination" evidence=ISS] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0005737 GO:GO:0006284 GO:GO:0006511
            GO:GO:0004843 GO:GO:0004221 GO:GO:0035520 eggNOG:COG5077
            MEROPS:C19.055 CTD:55031 HOVERGEN:HBG058854 KO:K11857 EMBL:BC128636
            RefSeq:NP_001090710.1 UniGene:Str.45630 ProteinModelPortal:A1A5G2
            STRING:A1A5G2 GeneID:100036690 KEGG:xtr:100036690
            Xenbase:XB-GENE-5760041 HOGENOM:HOG000037524 Uniprot:A1A5G2
        Length = 1354

 Score = 183 (69.5 bits), Expect = 4.2e-10, P = 4.2e-10
 Identities = 61/219 (27%), Positives = 99/219 (45%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPL--TAYFLQGLHSKECAKKDWCFTCELENLILRAKDG 644
             GL+N   +CY N +LQ L  TP      Y  +   S+E       +  +L+ L +  +  
Sbjct:   175 GLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVSSIPY--QLQRLFVLLQTS 232

Query:   645 KSPLSPIGILSRLQSIGSQLGNG-REEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDET 703
             K        ++R  S G       ++ D  E  R   D ++    +           ++ 
Sbjct:   233 KKRAIETTDVTR--SFGWDSSEAWQQHDVQELCRVMFDALEQKWKQT----------EQA 280

Query:   704 TLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIE--GD---IGNLEEALRRYTGTE 758
              LI   + G L+  +KC +C  +S R +  +D+ + I   G     G++EEAL+ +   E
Sbjct:   281 DLINQLYQGKLKDYVKCLECGYESWRIDTFLDIPLVIRPFGSNTAFGSMEEALQAFIQPE 340

Query:   759 ILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
              LDG N+Y C+RCK    A+K L  +  P +LT+ LKRF
Sbjct:   341 TLDGPNQYFCERCKRKCDARKGLKFLHFPYLLTLQLKRF 379


>UNIPROTKB|Q2KJ72 [details] [associations]
            symbol:USP21 "Ubiquitin carboxyl-terminal hydrolase 21"
            species:9913 "Bos taurus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=ISS] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=ISS] [GO:0019784 "NEDD8-specific protease
            activity" evidence=ISS] [GO:0008234 "cysteine-type peptidase
            activity" evidence=ISS] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISS] [GO:0016578 "histone
            deubiquitination" evidence=ISS] [GO:0003713 "transcription
            coactivator activity" evidence=ISS] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0046872
            "metal ion binding" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893
            GO:GO:0046872 GO:GO:0006351 GO:GO:0003713 GO:GO:0006511
            GO:GO:0016578 GO:GO:0004843 GO:GO:0004221 GO:GO:0019784
            eggNOG:COG5533 HOGENOM:HOG000231498 HSSP:P43593 EMBL:BC105488
            IPI:IPI00715496 RefSeq:NP_001039841.1 UniGene:Bt.24990
            ProteinModelPortal:Q2KJ72 MEROPS:C19.034 GeneID:534273
            KEGG:bta:534273 CTD:27005 HOVERGEN:HBG011164 InParanoid:Q2KJ72
            KO:K11833 OrthoDB:EOG4229JD NextBio:20876334 Uniprot:Q2KJ72
        Length = 565

 Score = 142 (55.0 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
 Identities = 38/104 (36%), Positives = 54/104 (51%)

Query:   699 LEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEI--EGDIG---NLEEALRR 753
             LE E + I   F G L+S +KC  C  +S   E   DL++ I  +G  G   +L +    
Sbjct:   363 LEREDSKIVDLFVGQLKSCLKCQACGYRSTTFEVFCDLSLPIPKKGFAGGKVSLRDCFNL 422

Query:   754 YTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             +T  E L+ EN   CDRC+   ++ KKLT+   P IL + L RF
Sbjct:   423 FTKEEELESENAPVCDRCRQKTRSTKKLTVQRFPRILVLHLNRF 466

 Score = 84 (34.6 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
 Identities = 27/101 (26%), Positives = 46/101 (45%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKEC--AKKDWCFTCELENLI--LRAK 642
             GL N GN+C+ N +LQCL+ T PL  + L+    +E     +    T    ++I  L   
Sbjct:   213 GLRNLGNTCFLNALLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGALWHP 272

Query:   643 DGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTM 683
             D    ++P    +  Q          ++DA EFL+  ++ +
Sbjct:   273 DSCEAVNPTRFRAVFQKYVPSFSGYSQQDAQEFLKLLMERL 313


>UNIPROTKB|F1RFM4 [details] [associations]
            symbol:USP42 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0016579 "protein deubiquitination" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 GO:GO:0006511 GO:GO:0016579 GO:GO:0004221
            GeneTree:ENSGT00670000097591 EMBL:FP102636
            Ensembl:ENSSSCT00000008334 Uniprot:F1RFM4
        Length = 189

 Score = 154 (59.3 bits), Expect = 4.9e-10, P = 4.9e-10
 Identities = 28/82 (34%), Positives = 44/82 (53%)

Query:   578 WNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENL 637
             W +      GL N GN+C+AN  LQCL +TPPL  Y L   HSK C  + +C  C ++  
Sbjct:   103 WQQTHRVGAGLQNLGNTCFANAALQCLTYTPPLANYMLSHEHSKTCHAEGFCMMCTMQAH 162

Query:   638 ILRAKDGKSP-LSPIGILSRLQ 658
             I +A       + P+ +++ ++
Sbjct:   163 ITQALSNPGDVIKPMFVINEMR 184


>UNIPROTKB|Q5U252 [details] [associations]
            symbol:usp47 "Ubiquitin carboxyl-terminal hydrolase 47"
            species:8355 "Xenopus laevis" [GO:0004843 "ubiquitin-specific
            protease activity" evidence=ISS] [GO:0005737 "cytoplasm"
            evidence=ISS] [GO:0006284 "base-excision repair" evidence=ISS]
            [GO:0006974 "response to DNA damage stimulus" evidence=ISS]
            [GO:0035520 "monoubiquitinated protein deubiquitination"
            evidence=ISS] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005737
            GO:GO:0006284 GO:GO:0006511 GO:GO:0004843 GO:GO:0004221
            GO:GO:0035520 MEROPS:C19.055 CTD:55031 HOVERGEN:HBG058854 KO:K11857
            EMBL:BC086278 RefSeq:NP_001088634.1 UniGene:Xl.49309
            ProteinModelPortal:Q5U252 GeneID:495686 KEGG:xla:495686
            Xenbase:XB-GENE-5760104 Uniprot:Q5U252
        Length = 1350

 Score = 182 (69.1 bits), Expect = 5.4e-10, P = 5.4e-10
 Identities = 61/219 (27%), Positives = 98/219 (44%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPL--TAYFLQGLHSKECAKKDWCFTCELENLILRAKDG 644
             GL+N   +CY N +LQ L  TP      Y  +   S+E       +  +L+ L +  +  
Sbjct:   174 GLVNQAMTCYLNSLLQTLFMTPEFRNALYKWEFEESEEDPVSSIPY--QLQRLFVLLQTS 231

Query:   645 KSPLSPIGILSRLQSIGSQLGNG-REEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDET 703
             K        ++R  S G       ++ D  E  R   D ++    +           ++ 
Sbjct:   232 KKRAIETTDVTR--SFGWDSSEAWQQHDVQELCRVMFDALEQKWKQT----------EQA 279

Query:   704 TLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIE--GD---IGNLEEALRRYTGTE 758
              LI   + G L+  +KC +C  +S R +  +D+ + I   G     G++EEAL  +   E
Sbjct:   280 DLINQLYQGKLKDYVKCLECGYESWRIDTFLDIPLVIRPYGSNTAFGSMEEALHAFIQPE 339

Query:   759 ILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
              LDG N+Y C+RCK    A+K L  +  P +LT+ LKRF
Sbjct:   340 TLDGPNQYFCERCKRKCDARKGLKFLHFPYLLTLQLKRF 378


>FB|FBgn0016756 [details] [associations]
            symbol:Ubp64E "Ubiquitin-specific protease 64E" species:7227
            "Drosophila melanogaster" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA;NAS] [GO:0005634 "nucleus" evidence=IDA;NAS]
            [GO:0006508 "proteolysis" evidence=NAS] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0050821 "protein stabilization" evidence=IDA] [GO:0016579
            "protein deubiquitination" evidence=IDA] [GO:0042675 "compound eye
            cone cell differentiation" evidence=IGI;IMP] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0031935 "regulation of chromatin
            silencing" evidence=IMP] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            GO:GO:0005634 EMBL:AE014296 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 eggNOG:COG5077 GeneTree:ENSGT00630000089581 KO:K11857
            EMBL:BT003784 EMBL:X99211 EMBL:AY058672 RefSeq:NP_523937.2
            RefSeq:NP_729087.1 RefSeq:NP_996001.2 UniGene:Dm.3704
            ProteinModelPortal:Q24574 SMR:Q24574 IntAct:Q24574 MINT:MINT-971166
            STRING:Q24574 MEROPS:C19.A50 PaxDb:Q24574
            EnsemblMetazoa:FBtr0077095 EnsemblMetazoa:FBtr0077096 GeneID:38644
            KEGG:dme:Dmel_CG5486 CTD:38644 FlyBase:FBgn0016756
            InParanoid:Q24574 OMA:CLECNTE OrthoDB:EOG4X69Q3 PhylomeDB:Q24574
            ChiTaRS:Ubp64E GenomeRNAi:38644 NextBio:809673 Bgee:Q24574
            GermOnline:CG5486 GO:GO:0031935 Uniprot:Q24574
        Length = 1556

 Score = 196 (74.1 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
 Identities = 62/218 (28%), Positives = 96/218 (44%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPL-TAYFLQGLHSKECAKKDWCFTCELENLILRAKDGK 645
             GL+N   +CY N +LQ L  TP    A +     +   AK       +L+ L L  +   
Sbjct:   397 GLVNQAMTCYLNSLLQALFMTPEFRNALYRWEFDNDNEAKN---IPYQLQKLFLNLQT-- 451

Query:   646 SPLSPIGILSRLQSIGSQLGNG-REEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETT 704
             SP + +      +S G       ++ D  E  R   D +     E    N       +  
Sbjct:   452 SPKAAVETTDLTRSFGWDSTEAWQQHDIQELCRVMFDAL-----EHKFKNTK-----QAN 501

Query:   705 LIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIE--GD---IGNLEEALRRYTGTEI 759
             LI   + G +   +KC +C+ +  R++  +D+ + +   G     G++EEALR +   E 
Sbjct:   502 LISNLYEGKMNDYVKCLECNTEKTREDTFLDIPLPVRPFGSSSAYGSIEEALRAFVQPET 561

Query:   760 LDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             LDG N+Y C++CK    A K L     P ILT+ LKRF
Sbjct:   562 LDGNNQYLCEKCKKKCDAHKGLHFKSFPYILTLHLKRF 599

 Score = 37 (18.1 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
 Identities = 11/43 (25%), Positives = 23/43 (53%)

Query:   233 KLDGPLSADITLDMLDNALNVKKLEERKPLSPKFAKLVDSVDN 275
             K   P+  ++  + +D  L+ ++L E+  L P+   L+  VD+
Sbjct:   241 KPSSPIK-ELDCEPVDT-LSKQQLSEQLQLYPQGRNLISPVDD 281


>ZFIN|ZDB-GENE-041008-187 [details] [associations]
            symbol:usp4 "ubiquitin specific protease 4
            (proto-oncogene)" species:7955 "Danio rerio" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0008233
            "peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695
            ZFIN:ZDB-GENE-041008-187 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            KO:K11835 GeneTree:ENSGT00670000097750 CTD:7375 EMBL:BX957236
            IPI:IPI00492306 RefSeq:XP_002662556.2 UniGene:Dr.125623
            UniGene:Dr.161797 UniGene:Dr.37682 Ensembl:ENSDART00000039868
            GeneID:449927 KEGG:dre:449927 NextBio:20832950 Uniprot:E7EZD6
        Length = 1009

 Score = 139 (54.0 bits), Expect = 8.4e-10, Sum P(2) = 8.4e-10
 Identities = 37/128 (28%), Positives = 65/128 (50%)

Query:   562 SDKGLFSYELFVKLYNWNKVELQP--CGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLH 619
             S   L SY  +   Y++ +   QP  CGL N GN+C+ N  LQCL+ TPPLT YFL+  +
Sbjct:   293 SGNRLGSYNSYSSSYSYRESAAQPGLCGLSNLGNTCFMNSALQCLSNTPPLTEYFLEDRY 352

Query:   620 SKECAKKDWC-FTCELE----NLILRAKDGKSP-LSPIGILSRLQSIGSQLGNGREEDAH 673
               E  +++      E+     +L+ +    +S  ++P    +++     Q    +++D+ 
Sbjct:   353 EAEINRENPLGMRGEIAEAYADLVKQMWLSRSSYVAPRTFKTQVGRFAPQFSGYQQQDSQ 412

Query:   674 EFLRYAID 681
             E L + +D
Sbjct:   413 ELLAFLLD 420

 Score = 91 (37.1 bits), Expect = 8.4e-10, Sum P(2) = 8.4e-10
 Identities = 18/51 (35%), Positives = 27/51 (52%)

Query:   747 LEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             L E +  +T  E L   + + C  CK +++A KK  +   P IL + LKRF
Sbjct:   836 LRECIELFTTMETLGEHDPWYCPTCKKHQQATKKFDLWSLPRILVVHLKRF 886


>UNIPROTKB|F6Z5C0 [details] [associations]
            symbol:usp15 "Ubiquitin carboxyl-terminal hydrolase 15"
            species:8364 "Xenopus (Silurana) tropicalis" [GO:0004197
            "cysteine-type endopeptidase activity" evidence=ISS] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISS] [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
            [GO:0007179 "transforming growth factor beta receptor signaling
            pathway" evidence=ISS] [GO:0016579 "protein deubiquitination"
            evidence=ISS] [GO:0030509 "BMP signaling pathway" evidence=ISS]
            [GO:0035520 "monoubiquitinated protein deubiquitination"
            evidence=ISS] [GO:0060389 "pathway-restricted SMAD protein
            phosphorylation" evidence=ISS] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283
            SMART:SM00695 GO:GO:0005634 GO:GO:0005737 GO:GO:0030509
            GO:GO:0007179 GO:GO:0060389 GO:GO:0006511 GO:GO:0004197
            GO:GO:0004843 GO:GO:0004221 GO:GO:0035520 KO:K11835 MEROPS:C19.022
            EMBL:AAMC01103598 EMBL:AAMC01103599 EMBL:AAMC01103600
            EMBL:AAMC01103601 EMBL:BC166318 RefSeq:NP_001121498.1
            GeneID:100158604 KEGG:xtr:100158604 Xenbase:XB-GENE-1008519
            Uniprot:F6Z5C0
        Length = 982

 Score = 125 (49.1 bits), Expect = 8.9e-10, Sum P(2) = 8.9e-10
 Identities = 34/106 (32%), Positives = 52/106 (49%)

Query:   584 QP--CGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWC-FTCELEN---- 636
             QP  CGL N GN+C+ N  +QCL+ TPPLT YFL   +  E    +      E+      
Sbjct:   284 QPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQDELNMDNPLGMRGEIAKSYAE 343

Query:   637 LILRAKDGK-SPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAID 681
             LI +   GK S ++P    +++     Q    +++D  E L + +D
Sbjct:   344 LIKQMWSGKYSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLD 389

 Score = 105 (42.0 bits), Expect = 8.9e-10, Sum P(2) = 8.9e-10
 Identities = 27/97 (27%), Positives = 48/97 (49%)

Query:   701 DETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEIL 760
             DE + + L +   L+ K          E+ E + D T + +  +  L++ +  +T  E L
Sbjct:   744 DERSYLALDWDPKLKKKFFDENAAEDFEKHESV-DFTPQKKAFM-KLKDCIELFTTKEKL 801

Query:   761 DGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
               E+ + C  CK +++A KKL +   P +L + LKRF
Sbjct:   802 GAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRF 838


>UNIPROTKB|F1PZF8 [details] [associations]
            symbol:USP47 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00630000089581 OMA:NKSETGY EMBL:AAEX03012912
            Ensembl:ENSCAFT00000012458 Uniprot:F1PZF8
        Length = 1349

 Score = 179 (68.1 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 62/229 (27%), Positives = 100/229 (43%)

Query:   579 NKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKD----WCFTCEL 634
             NK E    GL+N   +CY N +LQ L  TP     F   L+  E  + +         +L
Sbjct:   155 NKSETGYVGLVNQAMTCYLNSLLQTLFMTPE----FRNALYKWEFEESEEDPVTSIPYQL 210

Query:   635 ENLILRAKDGKSPLSPIGILSRLQSIGSQLGNG-REEDAHEFLRYAIDTMQSVCIEEAGV 693
             + L +  +  K        ++R  S G       ++ D  E  R   D ++    +    
Sbjct:   211 QRLFVLLQTSKKRAIETTDVTR--SFGWDSSEAWQQHDVQELCRVMFDALEQKWKQT--- 265

Query:   694 NASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIE--GD---IGNLE 748
                    ++  LI   + G L+  ++C +C  +  R +  +D+ + I   G      ++E
Sbjct:   266 -------EQADLINELYQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVE 318

Query:   749 EALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             EAL  +   EILDG N+Y C+RCK    A+K L  +  P +LT+ LKRF
Sbjct:   319 EALHAFIQPEILDGPNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRF 367


>UNIPROTKB|E9PM46 [details] [associations]
            symbol:USP47 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            EMBL:AC124276 EMBL:AC104383 HGNC:HGNC:20076 ChiTaRS:USP47
            IPI:IPI00985193 ProteinModelPortal:E9PM46 SMR:E9PM46 PRIDE:E9PM46
            Ensembl:ENST00000527733 UCSC:uc001mjs.3 ArrayExpress:E9PM46
            Bgee:E9PM46 Uniprot:E9PM46
        Length = 1355

 Score = 179 (68.1 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 62/229 (27%), Positives = 100/229 (43%)

Query:   579 NKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKD----WCFTCEL 634
             NK E    GL+N   +CY N +LQ L  TP     F   L+  E  + +         +L
Sbjct:   161 NKSETGYVGLVNQAMTCYLNSLLQTLFMTPE----FRNALYKWEFEESEEDPVTSIPYQL 216

Query:   635 ENLILRAKDGKSPLSPIGILSRLQSIGSQLGNG-REEDAHEFLRYAIDTMQSVCIEEAGV 693
             + L +  +  K        ++R  S G       ++ D  E  R   D ++    +    
Sbjct:   217 QRLFVLLQTSKKRAIETTDVTR--SFGWDSSEAWQQHDVQELCRVMFDALEQKWKQT--- 271

Query:   694 NASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIE--GD---IGNLE 748
                    ++  LI   + G L+  ++C +C  +  R +  +D+ + I   G      ++E
Sbjct:   272 -------EQADLINELYQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVE 324

Query:   749 EALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             EAL  +   EILDG N+Y C+RCK    A+K L  +  P +LT+ LKRF
Sbjct:   325 EALHAFIQPEILDGPNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRF 373


>RGD|1310411 [details] [associations]
            symbol:Usp47 "ubiquitin specific peptidase 47" species:10116
            "Rattus norvegicus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
            [GO:0006284 "base-excision repair" evidence=IEA;ISO] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0006974 "response to DNA damage stimulus" evidence=ISO]
            [GO:0010972 "negative regulation of G2/M transition of mitotic cell
            cycle" evidence=IEA;ISO] [GO:0019005 "SCF ubiquitin ligase complex"
            evidence=IEA;ISO] [GO:0030307 "positive regulation of cell growth"
            evidence=IEA;ISO] [GO:0034644 "cellular response to UV"
            evidence=IEA;ISO] [GO:0035520 "monoubiquitinated protein
            deubiquitination" evidence=IEA;ISO] [GO:0042493 "response to drug"
            evidence=IEA;ISO] [GO:0043066 "negative regulation of apoptotic
            process" evidence=IEA;ISO] [GO:0043154 "negative regulation of
            cysteine-type endopeptidase activity involved in apoptotic process"
            evidence=IEA;ISO] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IEA;ISO] [GO:0071987
            "WD40-repeat domain binding" evidence=IEA;ISO] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 RGD:1310411 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 GeneTree:ENSGT00630000089581 CTD:55031 KO:K11857
            EMBL:AC147546 IPI:IPI00870919 RefSeq:NP_001101012.2
            UniGene:Rn.101536 PRIDE:F1MAA1 Ensembl:ENSRNOT00000065712
            GeneID:308896 KEGG:rno:308896 UCSC:RGD:1310411 NextBio:659738
            ArrayExpress:F1MAA1 Uniprot:F1MAA1
        Length = 1355

 Score = 179 (68.1 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 62/229 (27%), Positives = 100/229 (43%)

Query:   579 NKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKD----WCFTCEL 634
             NK E    GL+N   +CY N +LQ L  TP     F   L+  E  + +         +L
Sbjct:   161 NKSETGYVGLVNQAMTCYLNSLLQTLFMTPE----FRNALYKWEFEESEEDPVTSIPYQL 216

Query:   635 ENLILRAKDGKSPLSPIGILSRLQSIGSQLGNG-REEDAHEFLRYAIDTMQSVCIEEAGV 693
             + L +  +  K        ++R  S G       ++ D  E  R   D ++    +    
Sbjct:   217 QRLFVLLQTSKKRAIETTDVTR--SFGWDSSEAWQQHDVQELCRVMFDALEQKWKQT--- 271

Query:   694 NASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIE--GD---IGNLE 748
                    ++  LI   + G L+  ++C +C  +  R +  +D+ + I   G      ++E
Sbjct:   272 -------EQADLINELYQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVE 324

Query:   749 EALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             EAL  +   EILDG N+Y C+RCK    A+K L  +  P +LT+ LKRF
Sbjct:   325 EALHAFIQPEILDGPNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRF 373


>UNIPROTKB|E9PT09 [details] [associations]
            symbol:Usp47 "Ubiquitin carboxyl-terminal hydrolase"
            species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0006284 "base-excision repair"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0010972 "negative regulation of G2/M
            transition of mitotic cell cycle" evidence=IEA] [GO:0019005 "SCF
            ubiquitin ligase complex" evidence=IEA] [GO:0030307 "positive
            regulation of cell growth" evidence=IEA] [GO:0034644 "cellular
            response to UV" evidence=IEA] [GO:0035520 "monoubiquitinated
            protein deubiquitination" evidence=IEA] [GO:0042493 "response to
            drug" evidence=IEA] [GO:0043066 "negative regulation of apoptotic
            process" evidence=IEA] [GO:0043154 "negative regulation of
            cysteine-type endopeptidase activity involved in apoptotic process"
            evidence=IEA] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0071987 "WD40-repeat domain
            binding" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            RGD:1310411 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 EMBL:AC147546
            IPI:IPI00950497 Ensembl:ENSRNOT00000064293 ArrayExpress:E9PT09
            Uniprot:E9PT09
        Length = 1357

 Score = 179 (68.1 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 62/229 (27%), Positives = 100/229 (43%)

Query:   579 NKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKD----WCFTCEL 634
             NK E    GL+N   +CY N +LQ L  TP     F   L+  E  + +         +L
Sbjct:   161 NKSETGYVGLVNQAMTCYLNSLLQTLFMTPE----FRNALYKWEFEESEEDPVTSIPYQL 216

Query:   635 ENLILRAKDGKSPLSPIGILSRLQSIGSQLGNG-REEDAHEFLRYAIDTMQSVCIEEAGV 693
             + L +  +  K        ++R  S G       ++ D  E  R   D ++    +    
Sbjct:   217 QRLFVLLQTSKKRAIETTDVTR--SFGWDSSEAWQQHDVQELCRVMFDALEQKWKQT--- 271

Query:   694 NASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIE--GD---IGNLE 748
                    ++  LI   + G L+  ++C +C  +  R +  +D+ + I   G      ++E
Sbjct:   272 -------EQADLINELYQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVE 324

Query:   749 EALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             EAL  +   EILDG N+Y C+RCK    A+K L  +  P +LT+ LKRF
Sbjct:   325 EALHAFIQPEILDGPNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRF 373


>UNIPROTKB|F1LYA3 [details] [associations]
            symbol:Usp47 "Ubiquitin carboxyl-terminal hydrolase"
            species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 RGD:1310411 GO:GO:0005737
            GO:GO:0045892 GO:GO:0043066 GO:GO:0043154 GO:GO:0030307
            GO:GO:0042493 GO:GO:0006284 GO:GO:0006511 GO:GO:0019005
            GO:GO:0034644 GO:GO:0004843 GO:GO:0004221 GO:GO:0035520
            GO:GO:0010972 EMBL:AC147546 IPI:IPI00949212
            Ensembl:ENSRNOT00000022817 ArrayExpress:F1LYA3 Uniprot:F1LYA3
        Length = 1363

 Score = 179 (68.1 bits), Expect = 1.1e-09, P = 1.1e-09
 Identities = 62/229 (27%), Positives = 100/229 (43%)

Query:   579 NKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKD----WCFTCEL 634
             NK E    GL+N   +CY N +LQ L  TP     F   L+  E  + +         +L
Sbjct:   168 NKSETGYVGLVNQAMTCYLNSLLQTLFMTPE----FRNALYKWEFEESEEDPVTSIPYQL 223

Query:   635 ENLILRAKDGKSPLSPIGILSRLQSIGSQLGNG-REEDAHEFLRYAIDTMQSVCIEEAGV 693
             + L +  +  K        ++R  S G       ++ D  E  R   D ++    +    
Sbjct:   224 QRLFVLLQTSKKRAIETTDVTR--SFGWDSSEAWQQHDVQELCRVMFDALEQKWKQT--- 278

Query:   694 NASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIE--GD---IGNLE 748
                    ++  LI   + G L+  ++C +C  +  R +  +D+ + I   G      ++E
Sbjct:   279 -------EQADLINELYQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVE 331

Query:   749 EALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             EAL  +   EILDG N+Y C+RCK    A+K L  +  P +LT+ LKRF
Sbjct:   332 EALHAFIQPEILDGPNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRF 380


>UNIPROTKB|F1N1Z2 [details] [associations]
            symbol:USP47 "Ubiquitin carboxyl-terminal hydrolase"
            species:9913 "Bos taurus" [GO:0071987 "WD40-repeat domain binding"
            evidence=IEA] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043154 "negative regulation of
            cysteine-type endopeptidase activity involved in apoptotic process"
            evidence=IEA] [GO:0043066 "negative regulation of apoptotic
            process" evidence=IEA] [GO:0042493 "response to drug" evidence=IEA]
            [GO:0035520 "monoubiquitinated protein deubiquitination"
            evidence=IEA] [GO:0034644 "cellular response to UV" evidence=IEA]
            [GO:0030307 "positive regulation of cell growth" evidence=IEA]
            [GO:0019005 "SCF ubiquitin ligase complex" evidence=IEA]
            [GO:0010972 "negative regulation of G2/M transition of mitotic cell
            cycle" evidence=IEA] [GO:0006284 "base-excision repair"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005737 GO:GO:0045892
            GO:GO:0043066 GO:GO:0043154 GO:GO:0030307 GO:GO:0042493
            GO:GO:0006284 GO:GO:0006511 GO:GO:0019005 GO:GO:0034644
            GO:GO:0004843 GO:GO:0004221 GO:GO:0035520 GO:GO:0010972
            GeneTree:ENSGT00630000089581 OMA:NKSETGY EMBL:DAAA02040680
            EMBL:DAAA02040681 IPI:IPI00693512 Ensembl:ENSBTAT00000014505
            ArrayExpress:F1N1Z2 Uniprot:F1N1Z2
        Length = 1375

 Score = 179 (68.1 bits), Expect = 1.2e-09, P = 1.2e-09
 Identities = 62/229 (27%), Positives = 100/229 (43%)

Query:   579 NKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKD----WCFTCEL 634
             NK E    GL+N   +CY N +LQ L  TP     F   L+  E  + +         +L
Sbjct:   181 NKSETGYVGLVNQAMTCYLNSLLQTLFMTPE----FRNALYKWEFEESEEDPVTSIPYQL 236

Query:   635 ENLILRAKDGKSPLSPIGILSRLQSIGSQLGNG-REEDAHEFLRYAIDTMQSVCIEEAGV 693
             + L +  +  K        ++R  S G       ++ D  E  R   D ++    +    
Sbjct:   237 QRLFVLLQTSKKRAIETTDVTR--SFGWDSSEAWQQHDVQELCRVMFDALEQKWKQT--- 291

Query:   694 NASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIE--GD---IGNLE 748
                    ++  LI   + G L+  ++C +C  +  R +  +D+ + I   G      ++E
Sbjct:   292 -------EQADLINELYQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVE 344

Query:   749 EALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             EAL  +   EILDG N+Y C+RCK    A+K L  +  P +LT+ LKRF
Sbjct:   345 EALHAFIQPEILDGPNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRF 393


>UNIPROTKB|Q96K76 [details] [associations]
            symbol:USP47 "Ubiquitin carboxyl-terminal hydrolase 47"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0043154 "negative regulation
            of cysteine-type endopeptidase activity involved in apoptotic
            process" evidence=IMP] [GO:0042493 "response to drug" evidence=IMP]
            [GO:0034644 "cellular response to UV" evidence=ISS] [GO:0045892
            "negative regulation of transcription, DNA-dependent" evidence=IMP]
            [GO:0019005 "SCF ubiquitin ligase complex" evidence=IDA]
            [GO:0006974 "response to DNA damage stimulus" evidence=IMP]
            [GO:0006284 "base-excision repair" evidence=IMP] [GO:0071987
            "WD40-repeat domain binding" evidence=IPI] [GO:0043066 "negative
            regulation of apoptotic process" evidence=IMP] [GO:0010972
            "negative regulation of G2/M transition of mitotic cell cycle"
            evidence=IMP] [GO:0030307 "positive regulation of cell growth"
            evidence=IMP] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=IDA] [GO:0035520 "monoubiquitinated protein
            deubiquitination" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005737 GO:GO:0045892
            GO:GO:0043066 GO:GO:0043154 GO:GO:0030307 GO:GO:0042493
            GO:GO:0006284 GO:GO:0006511 GO:GO:0019005 GO:GO:0034644
            GO:GO:0004843 GO:GO:0004221 GO:GO:0035520 GO:GO:0010972
            EMBL:AC124276 eggNOG:COG5077 OMA:NKSETGY EMBL:AK000734
            EMBL:AK027362 EMBL:AK092290 EMBL:AK127264 EMBL:AC104383
            EMBL:BC000226 EMBL:BC047044 EMBL:AK074076 EMBL:AL832991
            IPI:IPI00165528 IPI:IPI00607554 IPI:IPI00607731 RefSeq:NP_060414.3
            UniGene:Hs.577256 ProteinModelPortal:Q96K76 SMR:Q96K76
            IntAct:Q96K76 STRING:Q96K76 MEROPS:C19.055 PhosphoSite:Q96K76
            DMDM:68566222 PaxDb:Q96K76 PRIDE:Q96K76 Ensembl:ENST00000339865
            Ensembl:ENST00000399455 Ensembl:ENST00000539466 GeneID:55031
            KEGG:hsa:55031 UCSC:uc001mjq.1 UCSC:uc001mjr.3 UCSC:uc009ygi.3
            CTD:55031 GeneCards:GC11P011819 HGNC:HGNC:20076 HPA:HPA029286
            HPA:HPA029289 MIM:614460 neXtProt:NX_Q96K76 PharmGKB:PA134880952
            HOVERGEN:HBG058854 InParanoid:Q96K76 KO:K11857 ChiTaRS:USP47
            GenomeRNAi:55031 NextBio:58447 ArrayExpress:Q96K76 Bgee:Q96K76
            CleanEx:HS_USP47 Genevestigator:Q96K76 GermOnline:ENSG00000170242
            Uniprot:Q96K76
        Length = 1375

 Score = 179 (68.1 bits), Expect = 1.2e-09, P = 1.2e-09
 Identities = 62/229 (27%), Positives = 100/229 (43%)

Query:   579 NKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKD----WCFTCEL 634
             NK E    GL+N   +CY N +LQ L  TP     F   L+  E  + +         +L
Sbjct:   181 NKSETGYVGLVNQAMTCYLNSLLQTLFMTPE----FRNALYKWEFEESEEDPVTSIPYQL 236

Query:   635 ENLILRAKDGKSPLSPIGILSRLQSIGSQLGNG-REEDAHEFLRYAIDTMQSVCIEEAGV 693
             + L +  +  K        ++R  S G       ++ D  E  R   D ++    +    
Sbjct:   237 QRLFVLLQTSKKRAIETTDVTR--SFGWDSSEAWQQHDVQELCRVMFDALEQKWKQT--- 291

Query:   694 NASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIE--GD---IGNLE 748
                    ++  LI   + G L+  ++C +C  +  R +  +D+ + I   G      ++E
Sbjct:   292 -------EQADLINELYQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVE 344

Query:   749 EALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             EAL  +   EILDG N+Y C+RCK    A+K L  +  P +LT+ LKRF
Sbjct:   345 EALHAFIQPEILDGPNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRF 393


>MGI|MGI:1922246 [details] [associations]
            symbol:Usp47 "ubiquitin specific peptidase 47" species:10090
            "Mus musculus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006281
            "DNA repair" evidence=IEA] [GO:0006284 "base-excision repair"
            evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0006974 "response to DNA damage stimulus" evidence=ISO]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0010972
            "negative regulation of G2/M transition of mitotic cell cycle"
            evidence=ISO;ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0019005 "SCF ubiquitin ligase complex" evidence=ISO;ISS]
            [GO:0030307 "positive regulation of cell growth" evidence=ISO;ISS]
            [GO:0034644 "cellular response to UV" evidence=IMP] [GO:0035520
            "monoubiquitinated protein deubiquitination" evidence=ISO]
            [GO:0042493 "response to drug" evidence=ISO;ISS] [GO:0043066
            "negative regulation of apoptotic process" evidence=ISO;IMP]
            [GO:0043154 "negative regulation of cysteine-type endopeptidase
            activity involved in apoptotic process" evidence=ISO;ISS]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=ISO;ISS] [GO:0071987 "WD40-repeat domain binding"
            evidence=ISO] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 MGI:MGI:1922246
            GO:GO:0005737 GO:GO:0045892 GO:GO:0043066 GO:GO:0043154
            GO:GO:0030307 GO:GO:0042493 GO:GO:0006284 GO:GO:0006511
            GO:GO:0019005 GO:GO:0034644 GO:GO:0004843 GO:GO:0004221
            GO:GO:0035520 GO:GO:0010972 eggNOG:COG5077
            GeneTree:ENSGT00630000089581 OMA:NKSETGY MEROPS:C19.055 CTD:55031
            HOVERGEN:HBG058854 KO:K11857 EMBL:AK030909 EMBL:AK030963
            EMBL:AK041541 EMBL:AK082114 EMBL:AK087981 EMBL:AK131138
            EMBL:BC012722 EMBL:BC024117 EMBL:BC089364 EMBL:BC108425
            IPI:IPI00420143 IPI:IPI00608091 RefSeq:NP_598519.2
            RefSeq:NP_796223.2 UniGene:Mm.16974 ProteinModelPortal:Q8BY87
            SMR:Q8BY87 STRING:Q8BY87 PaxDb:Q8BY87 PRIDE:Q8BY87
            Ensembl:ENSMUST00000106653 GeneID:74996 KEGG:mmu:74996
            UCSC:uc009jgg.2 UCSC:uc009jgh.2 InParanoid:Q32NY0 OrthoDB:EOG4BRWJW
            NextBio:341978 Bgee:Q8BY87 CleanEx:MM_USP47 Genevestigator:Q8BY87
            GermOnline:ENSMUSG00000059263 Uniprot:Q8BY87
        Length = 1376

 Score = 179 (68.1 bits), Expect = 1.2e-09, P = 1.2e-09
 Identities = 63/229 (27%), Positives = 102/229 (44%)

Query:   579 NKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKEC--AKKD--WCFTCEL 634
             NK E    GL+N   +CY N +LQ L  TP     F   L+  E   +++D       +L
Sbjct:   181 NKSETGYVGLVNQAMTCYLNSLLQTLFMTPE----FRNALYKWEFEDSEEDPVTSIPYQL 236

Query:   635 ENLILRAKDGKSPLSPIGILSRLQSIGSQLGNG-REEDAHEFLRYAIDTMQSVCIEEAGV 693
             + L +  +  K        ++R  S G       ++ D  E  R   D ++    +    
Sbjct:   237 QRLFVLLQTSKKRAIETTDVTR--SFGWDSSEAWQQHDVQELCRVMFDALEQKWKQT--- 291

Query:   694 NASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIE--GD---IGNLE 748
                    ++  LI   + G L+  ++C +C  +  R +  +D+ + I   G      ++E
Sbjct:   292 -------EQADLINELYQGKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSSQAFASVE 344

Query:   749 EALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             EAL  +   EILDG N+Y C+RCK    A+K L  +  P +LT+ LKRF
Sbjct:   345 EALHAFIQPEILDGPNQYFCERCKKKCDARKGLRFLHFPYLLTLQLKRF 393


>MGI|MGI:2152450 [details] [associations]
            symbol:Usp3 "ubiquitin specific peptidase 3" species:10090
            "Mus musculus" [GO:0000278 "mitotic cell cycle" evidence=ISO]
            [GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISO] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006281 "DNA repair" evidence=ISO]
            [GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0006974 "response to DNA damage stimulus" evidence=IEA]
            [GO:0007049 "cell cycle" evidence=IEA] [GO:0008233 "peptidase
            activity" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
            [GO:0016578 "histone deubiquitination" evidence=ISO] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0031647 "regulation of
            protein stability" evidence=ISO] [GO:0042393 "histone binding"
            evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS50271 MGI:MGI:2152450 GO:GO:0046872
            GO:GO:0008270 GO:GO:0006281 GO:GO:0008234 GO:GO:0031647
            GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0016578 GO:GO:0004221 GO:GO:0000278 eggNOG:COG5560
            HOGENOM:HOG000231498 GeneTree:ENSGT00690000102047 MEROPS:C19.026
            CTD:9960 HOVERGEN:HBG103589 KO:K11986 OMA:DCLRSFT OrthoDB:EOG4G4GQC
            EMBL:AK031141 EMBL:BC017156 IPI:IPI00127231 RefSeq:NP_659186.1
            UniGene:Mm.38976 ProteinModelPortal:Q91W36 SMR:Q91W36
            PhosphoSite:Q91W36 PaxDb:Q91W36 PRIDE:Q91W36
            Ensembl:ENSMUST00000127569 GeneID:235441 KEGG:mmu:235441
            UCSC:uc009qey.1 InParanoid:Q91W36 NextBio:382674 Bgee:Q91W36
            CleanEx:MM_USP3 Genevestigator:Q91W36 GermOnline:ENSMUSG00000032376
            Uniprot:Q91W36
        Length = 520

 Score = 143 (55.4 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
 Identities = 36/124 (29%), Positives = 63/124 (50%)

Query:   689 EEAGVNASGP--LEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEI------ 740
             E + ++AS    +   +T++   FGG L++++ C  C  +S + +  +DL+++I      
Sbjct:   291 ENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRS 350

Query:   741 -------EGDIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIA 793
                     G + +L + LR +T  E LD    Y C +CK  +K+ KK  I + P  L + 
Sbjct:   351 KRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLPKALCLH 410

Query:   794 LKRF 797
             LKRF
Sbjct:   411 LKRF 414

 Score = 82 (33.9 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
 Identities = 36/144 (25%), Positives = 57/144 (39%)

Query:   557 TAGRYSDKGLF-SYELFVKLYNWNKVELQPC--GLINCGNSCYANVVLQCLAFTPPLTAY 613
             TA R+  + L  +  L  KL   N      C  GL N GN+C+ N +LQ L+       Y
Sbjct:   127 TADRHRKRKLLENSSLNSKLLKVNGSTTAICATGLRNLGNTCFMNAILQSLSNIEQFCCY 186

Query:   614 FLQ------------G---LHSKECAKKDWCFTCELENLILRAKDG-KSPLSPIGILSRL 657
             F +            G    H++     +     E    +     G ++  SP  +   +
Sbjct:   187 FKELPAVELRNGKTAGRRTYHTRSQGDSNVSLVEEFRKTLCALWQGSQTAFSPESLFYVV 246

Query:   658 QSIGSQLGNGREEDAHEFLRYAID 681
               I       +++DAHEF+RY +D
Sbjct:   247 WKIMPNFRGYQQQDAHEFMRYLLD 270

 Score = 37 (18.1 bits), Expect = 1.2e-09, Sum P(3) = 1.2e-09
 Identities = 12/34 (35%), Positives = 15/34 (44%)

Query:   528 NGLKTSLWKAVDQFRGSKSSKQCLSVGCETAGRY 561
             NG  +S W      R +KS   CL+      GRY
Sbjct:    21 NGSPSS-W-CCSVCRSNKSPWVCLTCSSVHCGRY 52


>CGD|CAL0004364 [details] [associations]
            symbol:orf19.2026 species:5476 "Candida albicans" [GO:0005634
            "nucleus" evidence=IEA] [GO:0051286 "cell tip" evidence=IEA]
            [GO:0005829 "cytosol" evidence=IEA] [GO:0032153 "cell division
            site" evidence=IEA] [GO:0016579 "protein deubiquitination"
            evidence=IEA] [GO:0034613 "cellular protein localization"
            evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 CGD:CAL0004364 GO:GO:0008234
            GO:GO:0006511 GO:GO:0004221 EMBL:AACQ01000031 KO:K11872
            eggNOG:COG5077 MEROPS:C19.A62 RefSeq:XP_719475.1
            ProteinModelPortal:Q5AD41 STRING:Q5AD41 GeneID:3638879
            KEGG:cal:CaO19.2026 Uniprot:Q5AD41
        Length = 700

 Score = 175 (66.7 bits), Expect = 1.3e-09, P = 1.3e-09
 Identities = 50/180 (27%), Positives = 88/180 (48%)

Query:   625 KKDWCFTCELENLILRAKDGKSPL---SPIGILSRLQSIGSQLG-NGREEDAHEFLRYAI 680
             ++D      L++L     + KS +   SP   + +L+        N    DAHEF  Y  
Sbjct:   271 QEDTALLYALKDLFESMVENKSTIGVVSPTYFIQKLKEKNFLFRQNNMHHDAHEFFNYLT 330

Query:   681 DTMQSVCIEEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEI 740
             + +    IE   +N  G   D+     + F G + ++ KC  C   + +QE  +DL+++I
Sbjct:   331 NEI----IES--LNKEGFTNDKNWCSDI-FRGLITNETKCLSCEKITSKQELFLDLSIDI 383

Query:   741 E-GDIG-NLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
               G+   +L  AL  ++ +E L  +NK+ C+ C S ++A K + + + P +L I LKRF+
Sbjct:   384 PPGESAFSLSYALNNFSKSETLTHQNKFYCNTCSSLQEAVKTIKLKKLPEVLVINLKRFK 443


>ZFIN|ZDB-GENE-050227-1 [details] [associations]
            symbol:fbxl22 "F-box and leucine-rich repeat protein
            22" species:7955 "Danio rerio" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0046872 "metal
            ion binding" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS50271 ZFIN:ZDB-GENE-050227-1
            GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00390000003748 EMBL:CR391977 IPI:IPI00495297
            Ensembl:ENSDART00000088884 Bgee:E7FC36 Uniprot:E7FC36
        Length = 527

 Score = 138 (53.6 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
 Identities = 33/108 (30%), Positives = 55/108 (50%)

Query:   703 TTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIE-------------GDIGNLEE 749
             +T++   FGG L++++ C  C  +S + +  +DL+++I              G    L +
Sbjct:   311 STIVTSVFGGVLQNEVYCLICGTESRKFDPFLDLSLDIPNQFRIKTTKDQEPGPTCTLSD 370

Query:   750 ALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
              LR +T  E LD    Y C +CK  +K+ KK  I + P +L + LKRF
Sbjct:   371 CLRSFTDLEELDETELYMCHKCKKRQKSTKKFWIQKLPKVLCLHLKRF 418

 Score = 83 (34.3 bits), Expect = 1.3e-09, Sum P(2) = 1.3e-09
 Identities = 37/145 (25%), Positives = 59/145 (40%)

Query:   555 CETAGRYSDKGLFSYELFVKLYNWNKVELQPC--GLINCGNSCYANVVLQCLAFTPPLTA 612
             C T  +   K   S+    K+   ++  L  C  GL N GN+C+ N +LQ L+     + 
Sbjct:   130 CNTDRQRKRKMSESFSPDSKMKQDSEGALVQCATGLRNLGNTCFMNAILQSLSNIQVFSC 189

Query:   613 YFLQ----GLHSKECAKKDWCFTC-----------ELENLILRAKDG-KSPLSPIGILSR 656
             YF +     L S + A +    T            E    +     G ++  SP  +   
Sbjct:   190 YFKELPSVALRSGKTAGRRMYHTRSQGDSSVSLVEEFRKTLCSLWQGSQTAFSPDALFYV 249

Query:   657 LQSIGSQLGNGREEDAHEFLRYAID 681
             +  I       +++DAHEFLRY +D
Sbjct:   250 IWKIMPSFRGYQQQDAHEFLRYLLD 274

 Score = 42 (19.8 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
 Identities = 22/96 (22%), Positives = 30/96 (31%)

Query:   482 VTNDIGSSSNFVGMPSVPSVRSERFDNVQRSSAMSAQIENSPSNVGNGLKTSLWKAVDQF 541
             V  D  S S F        V   +  +VQR       +ENS  N     K  + ++    
Sbjct:    88 VCMDCNSYSTFCYKCDEFVVNDTKLGHVQRVREHLQSLENSVCNTDRQRKRKMSESFSPD 147

Query:   542 RGSKSSKQCLSVGCETAGRYSDKGLFSYELFVKLYN 577
                K   +   V C T  R      F   +   L N
Sbjct:   148 SKMKQDSEGALVQCATGLRNLGNTCFMNAILQSLSN 183


>UNIPROTKB|K7EPT1 [details] [associations]
            symbol:USP36 "Ubiquitin carboxyl-terminal hydrolase 36"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 EMBL:AC022966
            HGNC:HGNC:20062 Ensembl:ENST00000586531 Uniprot:K7EPT1
        Length = 179

 Score = 150 (57.9 bits), Expect = 1.3e-09, P = 1.3e-09
 Identities = 25/64 (39%), Positives = 38/64 (59%)

Query:   578 WNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENL 637
             W +V     GL N GN+C+ N  +QCL +TPPL  Y L   H++ C +  +C  C ++N 
Sbjct:   114 WERVFRVGAGLHNLGNTCFLNATIQCLTYTPPLANYLLSKEHARSCHQGSFCMLCVMQNH 173

Query:   638 ILRA 641
             I++A
Sbjct:   174 IVQA 177


>UNIPROTKB|F1LWH1 [details] [associations]
            symbol:RGD1561481 "Protein RGD1561481" species:10116
            "Rattus norvegicus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] InterPro:IPR001394 Pfam:PF00443
            PROSITE:PS50235 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00650000093027 IPI:IPI00564682
            Ensembl:ENSRNOT00000042095 Ensembl:ENSRNOT00000056504
            Uniprot:F1LWH1
        Length = 173

 Score = 150 (57.9 bits), Expect = 1.3e-09, P = 1.3e-09
 Identities = 33/102 (32%), Positives = 57/102 (55%)

Query:   702 ETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILD 761
             + T +   F G L ++ +C  C   S + E  +DL+V++E +  ++   LR ++ TE L 
Sbjct:    22 DPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNT-SITHCLRGFSNTETLC 80

Query:   762 GENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFSPL 803
              E KY C+ C+S ++A K++   + P IL + LKRF+    L
Sbjct:    81 SEYKYYCEECRSKQEAHKRMK--KLPMILALHLKRFKYMDQL 120


>ZFIN|ZDB-GENE-050522-197 [details] [associations]
            symbol:usp48 "ubiquitin specific peptidase 48"
            species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] InterPro:IPR001394 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00973 PROSITE:PS50235
            PROSITE:PS51283 SMART:SM00695 ZFIN:ZDB-GENE-050522-197
            GO:GO:0006511 InterPro:IPR019955 PROSITE:PS50053 GO:GO:0004221
            GeneTree:ENSGT00630000089581 EMBL:CU928222 IPI:IPI00961174
            Ensembl:ENSDART00000123591 Uniprot:E7EY58
        Length = 1055

 Score = 177 (67.4 bits), Expect = 1.4e-09, P = 1.4e-09
 Identities = 59/226 (26%), Positives = 99/226 (43%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPL--TAYFLQGLHSK------ECAKKDW--CFTCE-LE 635
             GL N G +CY N  LQ       L    Y  Q   ++      +C   D+     CE L+
Sbjct:    90 GLTNLGATCYVNTFLQVWFHNLELRRALYRFQNSRAEGHNTDSDCIPTDYEPRTICEHLQ 149

Query:   636 NLI-LRAKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVN 694
              L  L     +  + P G++   +++G  L  G+++DA EF +  +  ++    ++   N
Sbjct:   150 YLFALLQNSNRRYIDPSGLV---KALG--LDTGQQQDAQEFSKLFLSLLEDTLSKQKDPN 204

Query:   695 ASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRY 754
                 ++ +       F G       C KC  +S    R  +L + I+G   NL E +  +
Sbjct:   205 LQNVIQQQ-------FCGQFSYVTVCNKCGRESPLPSRFYELELNIQGH-KNLTECVTEF 256

Query:   755 TGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVF 800
                E LDG+N+Y C+ C+S + A +++ +   P  L   L RF VF
Sbjct:   257 LKEEKLDGDNRYYCESCQSKQNATRRIKLQSLPRTLNFQLMRF-VF 301


>UNIPROTKB|E1C719 [details] [associations]
            symbol:USP15 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR013792 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 GO:GO:0008234
            GO:GO:0006511 SUPFAM:SSF55205 GO:GO:0004221
            GeneTree:ENSGT00670000097750 EMBL:AADN02009940 EMBL:AADN02009941
            IPI:IPI00822334 Ensembl:ENSGALT00000015893 Uniprot:E1C719
        Length = 953

 Score = 135 (52.6 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
 Identities = 61/235 (25%), Positives = 104/235 (44%)

Query:   461 VCSNGLNISGGTSLRFEKSNIVTNDIGSSSNFVGMPSVPSVRSERFDNVQRSSAMSAQIE 520
             +C NG N++   + RF K++ + + I      +   ++P  +  R  N   S+       
Sbjct:   138 LCENG-NMNNVVTRRFSKADTI-DTIEKEIRKIF--NIPGEKETRLWNKYMSNTFEPL-- 191

Query:   521 NSP-SNVGN-GLKTSLWKAVDQFRGSKSSKQCLSVGCETAG-RYSDKGLFSYELFVKLYN 577
             N P S + + GL       ++Q    K+       G  T   + S+  L SY  + K Y+
Sbjct:   192 NKPDSTIQDAGLYQGQVLVIEQ----KNEDGTWPRGSSTPNVKNSNYCLPSYTAY-KNYD 246

Query:   578 WNKV---ELQP--CGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECA-KKDWCFT 631
             +++      QP  CGL N GN+C+ N  +QCL+ TPPLT YFL   + +E          
Sbjct:   247 YSEPGRHNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMR 306

Query:   632 CELEN----LILRAKDGK-SPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAID 681
              E+      LI +   GK S ++P    +++     Q    +++D  E L + +D
Sbjct:   307 GEIAKSYAELIKQMWSGKYSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLD 361

 Score = 96 (38.9 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
 Identities = 18/51 (35%), Positives = 30/51 (58%)

Query:   747 LEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             L++ +  +T  E L  E+ + C  CK +++A KKL +   P +L + LKRF
Sbjct:   759 LKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRF 809

 Score = 41 (19.5 bits), Expect = 1.4e-09, Sum P(3) = 1.4e-09
 Identities = 6/12 (50%), Positives = 9/12 (75%)

Query:   687 CIEEAGVNASGP 698
             C +E G+N +GP
Sbjct:   603 CCKEHGINGNGP 614


>UNIPROTKB|F1NFR2 [details] [associations]
            symbol:USP15 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR013792 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 GO:GO:0008234
            GO:GO:0006511 SUPFAM:SSF55205 GO:GO:0004221
            GeneTree:ENSGT00670000097750 EMBL:AADN02009940 EMBL:AADN02009941
            IPI:IPI00575554 Ensembl:ENSGALT00000030681 Uniprot:F1NFR2
        Length = 955

 Score = 135 (52.6 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
 Identities = 61/235 (25%), Positives = 104/235 (44%)

Query:   461 VCSNGLNISGGTSLRFEKSNIVTNDIGSSSNFVGMPSVPSVRSERFDNVQRSSAMSAQIE 520
             +C NG N++   + RF K++ + + I      +   ++P  +  R  N   S+       
Sbjct:   140 LCENG-NMNNVVTRRFSKADTI-DTIEKEIRKIF--NIPGEKETRLWNKYMSNTFEPL-- 193

Query:   521 NSP-SNVGN-GLKTSLWKAVDQFRGSKSSKQCLSVGCETAG-RYSDKGLFSYELFVKLYN 577
             N P S + + GL       ++Q    K+       G  T   + S+  L SY  + K Y+
Sbjct:   194 NKPDSTIQDAGLYQGQVLVIEQ----KNEDGTWPRGSSTPNVKNSNYCLPSYTAY-KNYD 248

Query:   578 WNKV---ELQP--CGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECA-KKDWCFT 631
             +++      QP  CGL N GN+C+ N  +QCL+ TPPLT YFL   + +E          
Sbjct:   249 YSEPGRHNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMR 308

Query:   632 CELEN----LILRAKDGK-SPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAID 681
              E+      LI +   GK S ++P    +++     Q    +++D  E L + +D
Sbjct:   309 GEIAKSYAELIKQMWSGKYSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLD 363

 Score = 96 (38.9 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
 Identities = 18/51 (35%), Positives = 30/51 (58%)

Query:   747 LEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             L++ +  +T  E L  E+ + C  CK +++A KKL +   P +L + LKRF
Sbjct:   761 LKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRF 811

 Score = 41 (19.5 bits), Expect = 1.5e-09, Sum P(3) = 1.5e-09
 Identities = 6/12 (50%), Positives = 9/12 (75%)

Query:   687 CIEEAGVNASGP 698
             C +E G+N +GP
Sbjct:   605 CCKEHGINGNGP 616


>UNIPROTKB|E1C1R4 [details] [associations]
            symbol:USP47 "Ubiquitin carboxyl-terminal hydrolase 47"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0010972 "negative regulation
            of G2/M transition of mitotic cell cycle" evidence=IEA] [GO:0019005
            "SCF ubiquitin ligase complex" evidence=IEA] [GO:0030307 "positive
            regulation of cell growth" evidence=IEA] [GO:0034644 "cellular
            response to UV" evidence=IEA] [GO:0042493 "response to drug"
            evidence=IEA] [GO:0043066 "negative regulation of apoptotic
            process" evidence=IEA] [GO:0043154 "negative regulation of
            cysteine-type endopeptidase activity involved in apoptotic process"
            evidence=IEA] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0071987 "WD40-repeat domain
            binding" evidence=IEA] [GO:0006284 "base-excision repair"
            evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
            evidence=ISS] [GO:0035520 "monoubiquitinated protein
            deubiquitination" evidence=ISS] [GO:0004843 "ubiquitin-specific
            protease activity" evidence=ISS] [GO:0005737 "cytoplasm"
            evidence=ISS] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005737
            GO:GO:0045892 GO:GO:0043066 GO:GO:0043154 GO:GO:0030307
            GO:GO:0042493 GO:GO:0006284 GO:GO:0006511 GO:GO:0019005
            GO:GO:0034644 GO:GO:0004843 GO:GO:0004221 GO:GO:0035520
            GO:GO:0010972 GeneTree:ENSGT00630000089581 EMBL:AADN02030606
            EMBL:AADN02030607 IPI:IPI00587332 UniGene:Gga.5374
            Ensembl:ENSGALT00000008932 OMA:NKSETGY Uniprot:E1C1R4
        Length = 1375

 Score = 178 (67.7 bits), Expect = 1.5e-09, P = 1.5e-09
 Identities = 72/271 (26%), Positives = 116/271 (42%)

Query:   537 AVDQFRGSKSSKQCLSVGCETAGRYSDKGLFSYELFVKLYNWNKVELQPCGLINCGNSCY 596
             A D+F G    +   SVGC     Y  +  +SY   +     +K E    GL+N   +CY
Sbjct:   148 AQDRFIGPLPREG--SVGC--TNDYVSQS-YSYSSVL-----SKSETGYVGLVNQAMTCY 197

Query:   597 ANVVLQCLAFTPPLTAYFLQGLHSKECAKKD----WCFTCELENLILRAKDGKSPLSPIG 652
              N +LQ L  TP     F   L+  E  + +         +L+ L +  +  K       
Sbjct:   198 LNSLLQTLFMTPE----FRNALYKWEFEESEEDPVTSIPYQLQRLFVLLQTSKKRAIETT 253

Query:   653 ILSRLQSIGSQLGNG-REEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLIGLTFG 711
              ++R  S G       ++ D  E  R   D ++    +           ++  LI   + 
Sbjct:   254 DVTR--SFGWDSSEAWQQHDVQELCRVMFDALEQKWKQT----------EQADLINQLYQ 301

Query:   712 GYLRSKIKCTKCHGKSERQERMMDLTVEIE--GD---IGNLEEALRRYTGTEILDGENKY 766
             G L+  ++C +C  +  R +  +D+ + I   G      ++EEAL  +   EILDG N+Y
Sbjct:   302 GKLKDYVRCLECGYEGWRIDTYLDIPLVIRPYGSNQAFASVEEALHAFIQPEILDGPNQY 361

Query:   767 KCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
              C+RCK    A+K L  +  P +LT+ LKRF
Sbjct:   362 FCERCKKKCDARKGLRFLHFPYLLTLQLKRF 392


>TAIR|locus:2037985 [details] [associations]
            symbol:UBP11 "AT1G32850" species:3702 "Arabidopsis
            thaliana" [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA;ISS]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            EMBL:AC006424 HSSP:P40818 eggNOG:COG5560 HOGENOM:HOG000264375
            KO:K11835 ProtClustDB:CLSN2689389 IPI:IPI00534425 PIR:C86453
            RefSeq:NP_174562.2 UniGene:At.51891 ProteinModelPortal:Q9MAQ3
            SMR:Q9MAQ3 MEROPS:C19.A04 EnsemblPlants:AT1G32850.1 GeneID:840179
            KEGG:ath:AT1G32850 TAIR:At1g32850 InParanoid:Q9MAQ3 OMA:HCSASEC
            PhylomeDB:Q9MAQ3 Genevestigator:Q9MAQ3 Uniprot:Q9MAQ3
        Length = 892

 Score = 142 (55.0 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
 Identities = 60/214 (28%), Positives = 90/214 (42%)

Query:   476 FEKSNIVTNDIGSSSNF--VGMPSVPSVRSERFDNVQRSSAMSAQIENSPSNVGNGLKTS 533
             FEK   V  D  S  +    G+     +  E  D    S  + +  EN  + V   L+  
Sbjct:   195 FEKKKSVLLDPSSEQSVEEAGLQFNQDILLE-VDGSASSQFVMSLAENELAMVP--LEPM 251

Query:   534 LWKAVDQFRGSKSSKQCLSVGCETAGRYSDKGLFSYELFVKLYNWNKVELQPCG-LINCG 592
                A+D  RG  +    LS G     ++S  G  +++  V    + K E +  G L N G
Sbjct:   252 RSDAMDIVRGGGT----LSNGHSNGFKFSFFGRNTFKDDVSSRTFGKGEKRGLGGLQNLG 307

Query:   593 NSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELE---NLILRA--KDGKSP 647
             N+C+ N  LQCLA TPP+  YFLQ   S   AK       EL      +LR     G++ 
Sbjct:   308 NTCFMNSTLQCLAHTPPIVEYFLQDYRSDINAKNPLGMRGELAIAFGELLRKLWSSGQNT 367

Query:   648 LSPIGILSRLQSIGSQLGNGREEDAHEFLRYAID 681
             ++P    ++L     Q     + D+ E L + +D
Sbjct:   368 VAPRAFKTKLARFAPQFSGYNQHDSQEMLAFLLD 401

 Score = 84 (34.6 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
 Identities = 18/52 (34%), Positives = 28/52 (53%)

Query:   746 NLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             +L   L  +   E L  ++ + C  CK + +A KKL + + P+IL   LKRF
Sbjct:   734 SLFSCLEAFLAEEPLGPDDMWYCPGCKEHRQANKKLDLWKLPDILVFHLKRF 785


>UNIPROTKB|Q2HJE4 [details] [associations]
            symbol:USP15 "Ubiquitin carboxyl-terminal hydrolase 15"
            species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0004843 "ubiquitin-specific
            protease activity" evidence=ISS] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0004197 "cysteine-type
            endopeptidase activity" evidence=ISS] [GO:0060389
            "pathway-restricted SMAD protein phosphorylation" evidence=ISS]
            [GO:0035520 "monoubiquitinated protein deubiquitination"
            evidence=ISS] [GO:0030509 "BMP signaling pathway" evidence=ISS]
            [GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0007179
            "transforming growth factor beta receptor signaling pathway"
            evidence=ISS] [GO:0046332 "SMAD binding" evidence=IEA] [GO:0005160
            "transforming growth factor beta receptor binding" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR006615
            InterPro:IPR013792 InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283
            SMART:SM00695 GO:GO:0005634 GO:GO:0005737 GO:GO:0030509
            GO:GO:0007179 GO:GO:0060389 GO:GO:0006511 SUPFAM:SSF55205
            GO:GO:0004197 GO:GO:0004843 GO:GO:0004221 GO:GO:0035520
            eggNOG:COG5560 HOGENOM:HOG000264375 KO:K11835 HOVERGEN:HBG000864
            GeneTree:ENSGT00670000097750 EMBL:DAAA02013374 EMBL:DAAA02013375
            EMBL:DAAA02013376 EMBL:DAAA02013377 EMBL:DAAA02013378 EMBL:BC105521
            IPI:IPI00697254 RefSeq:NP_001039895.1 RefSeq:XP_003586138.1
            UniGene:Bt.29017 ProteinModelPortal:Q2HJE4 SMR:Q2HJE4
            MEROPS:C19.022 PRIDE:Q2HJE4 Ensembl:ENSBTAT00000037574
            GeneID:538284 KEGG:bta:538284 InParanoid:Q2HJE4 OMA:RMDPLAK
            OrthoDB:EOG4DNF3R NextBio:20877322 Uniprot:Q2HJE4
        Length = 952

 Score = 131 (51.2 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
 Identities = 61/235 (25%), Positives = 103/235 (43%)

Query:   461 VCSNGLNISGGTSLRFEKSNIVTNDIGSSSNFVGMPSVPSVRSERFDNVQRSSAMSAQIE 520
             +C NG N++   + RF K++ + + I      +   ++P  +  R  N   S+       
Sbjct:   138 LCENG-NMNNVVTRRFSKADTI-DTIEKEIRKIF--NIPDEKETRLWNKYMSNTFEPL-- 191

Query:   521 NSP-SNVGN-GLKTSLWKAVDQFRGSKSSKQCLSVGCETAG-RYSDKGLFSYELFVKLYN 577
             N P S + + GL       ++Q    K+       G  T   + S+  L SY  + K Y+
Sbjct:   192 NKPDSTIQDAGLYQGQVLVIEQ----KNEDGTWPRGPSTPNVKNSNYCLPSYTAY-KNYD 246

Query:   578 WNKV---ELQP--CGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECA-KKDWCFT 631
             +++      QP  CGL N GN+C+ N   QCL+ TPPLT YFL   + +E          
Sbjct:   247 YSEPGRNNEQPGLCGLSNLGNTCFMNSAFQCLSNTPPLTEYFLNDKYQEELNFDNPLGMR 306

Query:   632 CELEN----LILRAKDGK-SPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAID 681
              E+      LI +   GK S ++P    +++     Q    +++D  E L + +D
Sbjct:   307 GEIAKSYAELIKQMWSGKYSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLD 361

 Score = 96 (38.9 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
 Identities = 18/51 (35%), Positives = 30/51 (58%)

Query:   747 LEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             L++ +  +T  E L  E+ + C  CK +++A KKL +   P +L + LKRF
Sbjct:   759 LKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRF 809


>UNIPROTKB|E9PCQ3 [details] [associations]
            symbol:USP15 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR013792 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 GO:GO:0008234
            GO:GO:0006511 SUPFAM:SSF55205 GO:GO:0004221 EMBL:AC048342
            EMBL:AC079035 EMBL:AC117370 HGNC:HGNC:12613 ChiTaRS:USP15
            IPI:IPI00219505 ProteinModelPortal:E9PCQ3 SMR:E9PCQ3 PRIDE:E9PCQ3
            Ensembl:ENST00000393654 ArrayExpress:E9PCQ3 Bgee:E9PCQ3
            Uniprot:E9PCQ3
        Length = 956

 Score = 131 (51.2 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
 Identities = 61/235 (25%), Positives = 102/235 (43%)

Query:   461 VCSNGLNISGGTSLRFEKSNIVTNDIGSSSNFVGMPSVPSVRSERFDNVQRSSAMSAQIE 520
             +C NG N++   + RF K++ + + I      +   S+P  +  R  N   S+       
Sbjct:   138 LCENG-NMNNVVTRRFSKADTI-DTIEKEIRKIF--SIPDEKETRLWNKYMSNTFEPL-- 191

Query:   521 NSP-SNVGN-GLKTSLWKAVDQFRGSKSSKQCLSVGCETAG-RYSDKGLFSYELFVKLYN 577
             N P S + + GL       +      K+       G  T   + S+  L SY  + K Y+
Sbjct:   192 NKPDSTIQDAGLYQGQVLFIVLVIEQKNEDGTWPRGPSTPNVKNSNYCLPSYTAY-KNYD 250

Query:   578 WNKV---ELQP--CGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECA-KKDWCFT 631
             +++      QP  CGL N GN+C+ N  +QCL+ TPPLT YFL   + +E          
Sbjct:   251 YSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMR 310

Query:   632 CELEN----LILRAKDGK-SPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAID 681
              E+      LI +   GK S ++P    +++     Q    +++D  E L + +D
Sbjct:   311 GEIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLD 365

 Score = 96 (38.9 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
 Identities = 18/51 (35%), Positives = 30/51 (58%)

Query:   747 LEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             L++ +  +T  E L  E+ + C  CK +++A KKL +   P +L + LKRF
Sbjct:   763 LKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRF 813


>ZFIN|ZDB-GENE-081104-421 [details] [associations]
            symbol:usp11 "ubiquitin specific peptidase 11"
            species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
            "peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283
            SMART:SM00695 ZFIN:ZDB-GENE-081104-421 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 GeneTree:ENSGT00670000097750 EMBL:CR457452
            EMBL:CR847787 IPI:IPI00890594 Ensembl:ENSDART00000075624
            ArrayExpress:F1QPF4 Bgee:F1QPF4 Uniprot:F1QPF4
        Length = 990

 Score = 126 (49.4 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
 Identities = 22/37 (59%), Positives = 28/37 (75%)

Query:   586 CGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKE 622
             CGL N GN+C+ N  LQCL+ TPPLT YFL+ L+ +E
Sbjct:   242 CGLTNLGNTCFMNSALQCLSNTPPLTEYFLKNLYLEE 278

 Score = 107 (42.7 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
 Identities = 23/72 (31%), Positives = 38/72 (52%)

Query:   726 KSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVE 785
             ++E+  +   + V  +     L+E +  +T  E L+ EN + C  CK ++ A KKL +  
Sbjct:   778 EAEKYIKHQSMDVPHQQTTVQLQECIELFTTVETLEEENPWYCPTCKRHQLATKKLDLWS 837

Query:   786 APNILTIALKRF 797
              P +L I LKRF
Sbjct:   838 LPEVLIIHLKRF 849

 Score = 39 (18.8 bits), Expect = 1.8e-09, Sum P(3) = 1.8e-09
 Identities = 18/68 (26%), Positives = 29/68 (42%)

Query:   657 LQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLIGLTFGGYLRS 716
             L  +   L   ++++  E LR A         EEA  N    L    ++I  TF G  +S
Sbjct:   342 LDGLHEDLNRVKKKEYIE-LRDADGRPDQEVAEEAWRNH---LRRNDSVIVDTFHGLFKS 397

Query:   717 KIKCTKCH 724
              + C +C+
Sbjct:   398 TLVCPECN 405


>UNIPROTKB|D4A2R6 [details] [associations]
            symbol:Usp40 "Ubiquitin carboxyl-terminal hydrolase"
            species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 RGD:1309613 GO:GO:0008234
            GO:GO:0006511 GO:GO:0004221 EMBL:AC092530 IPI:IPI00952023
            Ensembl:ENSRNOT00000064642 ArrayExpress:D4A2R6 Uniprot:D4A2R6
        Length = 501

 Score = 171 (65.3 bits), Expect = 2.0e-09, P = 2.0e-09
 Identities = 67/216 (31%), Positives = 97/216 (44%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLT-AYFLQG---LHSKECAKKDWCFTCELENLILRAK 642
             G+ N G +CY + +LQ L FTP    A F  G   L S E   K       +  L L+  
Sbjct:    42 GIRNQGGTCYLSSLLQTLHFTPEFREALFSLGPEELGSLEDKDKPEA-KVRIIPLQLQRL 100

Query:   643 DGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDE 702
               +  L      S      S  G   +E+  +     ++ +    +E + V  SG   D 
Sbjct:   101 FAQLLLVDQEAASTTDLTDS-FGWTSDEEMRQHDVQELNRILFSALETSLVGTSG--HD- 156

Query:   703 TTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEAL-RRYTGTEILD 761
               LI   + G + ++I C +C   SERQE  +DLTV ++ ++  LE+AL   Y   EI D
Sbjct:   157 --LIHRLYHGTIVNQIVCKECKNVSERQEDFLDLTVAVK-NVSGLEDALWNMYVEEEIFD 213

Query:   762 GENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
              +N Y C  C    KA K   + + P  LTI+L RF
Sbjct:   214 YDNLYHCGTCDRLVKAAKSAKLRKLPPFLTISLLRF 249


>DICTYBASE|DDB_G0271348 [details] [associations]
            symbol:DDB_G0271348 "putative ubiquitin
            carboxyl-terminal hydrolase (UCH)" species:44689 "Dictyostelium
            discoideum" [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            dictyBase:DDB_G0271348 GO:GO:0008234 EMBL:AAFI02000006
            GO:GO:0006511 GO:GO:0004221 eggNOG:COG5077 KO:K11854
            RefSeq:XP_645628.1 ProteinModelPortal:Q55BI4
            EnsemblProtists:DDB0237737 GeneID:8617820 KEGG:ddi:DDB_G0271348
            OMA:MTIPFRN Uniprot:Q55BI4
        Length = 1037

 Score = 147 (56.8 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
 Identities = 40/111 (36%), Positives = 53/111 (47%)

Query:   694 NASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGN---LEEA 750
             NAS    +  T I   FGG L     C KC  +S + E  ++L++           LEE 
Sbjct:   703 NASNST-NIVTEISNQFGGKLSQITTCRKCSSESIKVEEFLELSLPFHDHRKQQYQLEEM 761

Query:   751 LRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFS 801
             +  Y   E L G+N+Y C +C S + A K + I E PN L I L RF  FS
Sbjct:   762 INGYLSNEELIGDNRYHCSKCNSLQDADKIIEINETPNHLIIGLNRFH-FS 811

 Score = 82 (33.9 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
 Identities = 18/37 (48%), Positives = 20/37 (54%)

Query:   579 NKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFL 615
             N+V     GLIN GN+CY N  LQ L  T P   Y L
Sbjct:   538 NRVLTDRSGLINLGNTCYMNSFLQSLYMTIPFRNYLL 574

 Score = 42 (19.8 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
 Identities = 19/72 (26%), Positives = 34/72 (47%)

Query:   618 LHSKECAKKDWCFT-CEL--ENLILRAKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHE 674
             ++SKE  K+       +L   NL L  K+  SP     +   LQS+  +   G++ D+ E
Sbjct:   610 IYSKEILKRPQLLKQIQLLFGNLRLSIKESISP----NLF--LQSLPIEFQTGQQHDSFE 663

Query:   675 FLRYAIDTMQSV 686
             F +  +D +  +
Sbjct:   664 FGKSLLDHLDLI 675


>MGI|MGI:1934029 [details] [associations]
            symbol:Usp8 "ubiquitin specific peptidase 8" species:10090
            "Mus musculus" [GO:0000281 "cytokinesis after mitosis"
            evidence=ISO] [GO:0001669 "acrosomal vesicle" evidence=IDA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISO;IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005768
            "endosome" evidence=IEA] [GO:0005769 "early endosome" evidence=ISO]
            [GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0005886 "plasma
            membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0007032 "endosome organization" evidence=ISO;IMP]
            [GO:0007049 "cell cycle" evidence=IEA] [GO:0007265 "Ras protein
            signal transduction" evidence=IPI] [GO:0008233 "peptidase activity"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016579
            "protein deubiquitination" evidence=ISO;IDA;IMP] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0017124 "SH3 domain binding"
            evidence=IEA] [GO:0019897 "extrinsic to plasma membrane"
            evidence=ISO] [GO:0030496 "midbody" evidence=ISO;IDA] [GO:0031313
            "extrinsic to endosome membrane" evidence=IDA] [GO:0070536 "protein
            K63-linked deubiquitination" evidence=ISO] [GO:0071108 "protein
            K48-linked deubiquitination" evidence=ISO] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 Pfam:PF00581 MGI:MGI:1934029 GO:GO:0005829
            GO:GO:0005886 GO:GO:0005634 GO:GO:0007265 GO:GO:0007049
            Gene3D:3.40.250.10 InterPro:IPR001763 SMART:SM00450 SUPFAM:SSF52821
            PROSITE:PS50206 GO:GO:0006511 GO:GO:0030496 GO:GO:0007032
            GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 eggNOG:COG5533 KO:K11839
            GO:GO:0031313 EMBL:AL732330 GeneTree:ENSGT00670000097591
            MEROPS:C19.011 CTD:9101 HOGENOM:HOG000231497 HOVERGEN:HBG012631
            OrthoDB:EOG4XKV6B InterPro:IPR015063 Pfam:PF08969 EMBL:AB045709
            EMBL:AF057146 EMBL:AK122195 EMBL:BC027052 EMBL:BC050947
            EMBL:BC061465 EMBL:BC066126 IPI:IPI00171977 RefSeq:NP_062703.2
            UniGene:Mm.272629 UniGene:Mm.490069 ProteinModelPortal:Q80U87
            SMR:Q80U87 IntAct:Q80U87 MINT:MINT-144852 STRING:Q80U87
            PhosphoSite:Q80U87 PaxDb:Q80U87 PRIDE:Q80U87
            Ensembl:ENSMUST00000028841 GeneID:84092 KEGG:mmu:84092
            UCSC:uc008meb.1 NextBio:350878 Bgee:Q80U87 CleanEx:MM_USP8
            Genevestigator:Q80U87 GermOnline:ENSMUSG00000027363 Uniprot:Q80U87
        Length = 1080

 Score = 128 (50.1 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
 Identities = 28/98 (28%), Positives = 52/98 (53%)

Query:   701 DETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIG-NLEEALRRYTGTEI 759
             +E+ ++ L F G  +S ++C  C  +S   E  M L++ +       L++ LR ++  E 
Sbjct:   880 NESIIVAL-FQGQFKSTVQCLTCRRRSRTFEAFMYLSLPLASTSKCTLQDCLRLFSKEEK 938

Query:   760 LDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             L   N++ C  C++   + KK+ I + P +L + LKRF
Sbjct:   939 LTDNNRFYCSHCRARRDSLKKIEIWKLPPVLLVHLKRF 976

 Score = 99 (39.9 bits), Expect = 2.2e-09, Sum P(2) = 2.2e-09
 Identities = 28/101 (27%), Positives = 46/101 (45%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCF----TCELENLILRAK 642
             GL N GN+CY N +LQCL   P L  YF +  +  +  + +         E   +I++A 
Sbjct:   740 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGIIMKAL 799

Query:   643 -DGKSP-LSPIGILSRLQSIGSQLGNGREEDAHEFLRYAID 681
               G+   +SP      +  I  Q     ++D+ E L + +D
Sbjct:   800 WTGQYRYISPKDFKVTIGKINDQFAGSSQQDSQELLLFLMD 840


>WB|WBGene00010406 [details] [associations]
            symbol:math-33 species:6239 "Caenorhabditis elegans"
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0040018 "positive regulation of multicellular
            organism growth" evidence=IMP] [GO:0040010 "positive regulation of
            growth rate" evidence=IMP] [GO:0002119 "nematode larval
            development" evidence=IMP] [GO:0031581 "hemidesmosome assembly"
            evidence=IGI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634
            "nucleus" evidence=IDA] InterPro:IPR001394 InterPro:IPR002083
            InterPro:IPR008974 InterPro:IPR018200 Pfam:PF00443 Pfam:PF00917
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50144 PROSITE:PS50235
            SMART:SM00061 GO:GO:0005634 GO:GO:0040010 GO:GO:0002119
            GO:GO:0040018 GO:GO:0006511 GO:GO:0004843 GO:GO:0016579
            GO:GO:0004221 SUPFAM:SSF49599 GO:GO:0031581 HSSP:Q93009
            eggNOG:COG5077 HOGENOM:HOG000160240 KO:K11838
            GeneTree:ENSGT00630000089581 EMBL:Z92835 RefSeq:NP_001024012.1
            ProteinModelPortal:Q7JKC3 SMR:Q7JKC3 STRING:Q7JKC3 MEROPS:C19.A54
            PaxDb:Q7JKC3 PRIDE:Q7JKC3 EnsemblMetazoa:H19N07.2c GeneID:179538
            KEGG:cel:CELE_H19N07.2 UCSC:H19N07.2a CTD:179538 WormBase:H19N07.2c
            InParanoid:Q7JKC3 OMA:ERAFEAY NextBio:905840 ArrayExpress:Q7JKC3
            Uniprot:Q7JKC3
        Length = 1135

 Score = 175 (66.7 bits), Expect = 2.5e-09, P = 2.5e-09
 Identities = 64/229 (27%), Positives = 104/229 (45%)

Query:   576 YNWNKVELQPC-GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCEL 634
             Y W+      C GL N G +CY N +LQ   FT   T  F + +++ +   +        
Sbjct:   182 YMWDSKRHTGCIGLRNQGATCYMNSILQSFYFT---TG-FRRAVYNMDVGTEP-----NE 232

Query:   635 ENLILRAK----DGKSPLSPIGILSRLQSIG-SQLGNGREEDAHEFLRYAIDTMQSVCIE 689
              N++L  +    + +     +   S  ++ G  +L    + D  EF R  +D +++    
Sbjct:   233 SNIVLAMQRVFYELQMASEAVETNSLTRAFGWDKLDAFNQHDVQEFCRVLLDNLET---- 288

Query:   690 EAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEE 749
                    G  E+++  I   F G ++S IKC     +S R E   D+ + + G + +LE 
Sbjct:   289 ----KMKGTSEEKS--IPNLFRGNMKSYIKCLDVDYESSRTESFYDVQLNVLG-MDSLER 341

Query:   750 ALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
             A   YT +EILD ENKY        ++A+K +  VE P IL + L RFQ
Sbjct:   342 AFEAYTTSEILDDENKYDAGD-HGLQRAEKGVKFVELPPILHVQLMRFQ 389


>UNIPROTKB|Q7JKC3 [details] [associations]
            symbol:usp-7 "Ubiquitin carboxyl-terminal hydrolase 7"
            species:6239 "Caenorhabditis elegans" [GO:0016579 "protein
            deubiquitination" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0004843 "ubiquitin-specific protease activity" evidence=ISS]
            InterPro:IPR001394 InterPro:IPR002083 InterPro:IPR008974
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF00917 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50144 PROSITE:PS50235 SMART:SM00061
            GO:GO:0005634 GO:GO:0040010 GO:GO:0002119 GO:GO:0040018
            GO:GO:0006511 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            SUPFAM:SSF49599 GO:GO:0031581 HSSP:Q93009 eggNOG:COG5077
            HOGENOM:HOG000160240 KO:K11838 GeneTree:ENSGT00630000089581
            EMBL:Z92835 RefSeq:NP_001024012.1 ProteinModelPortal:Q7JKC3
            SMR:Q7JKC3 STRING:Q7JKC3 MEROPS:C19.A54 PaxDb:Q7JKC3 PRIDE:Q7JKC3
            EnsemblMetazoa:H19N07.2c GeneID:179538 KEGG:cel:CELE_H19N07.2
            UCSC:H19N07.2a CTD:179538 WormBase:H19N07.2c InParanoid:Q7JKC3
            OMA:ERAFEAY NextBio:905840 ArrayExpress:Q7JKC3 Uniprot:Q7JKC3
        Length = 1135

 Score = 175 (66.7 bits), Expect = 2.5e-09, P = 2.5e-09
 Identities = 64/229 (27%), Positives = 104/229 (45%)

Query:   576 YNWNKVELQPC-GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCEL 634
             Y W+      C GL N G +CY N +LQ   FT   T  F + +++ +   +        
Sbjct:   182 YMWDSKRHTGCIGLRNQGATCYMNSILQSFYFT---TG-FRRAVYNMDVGTEP-----NE 232

Query:   635 ENLILRAK----DGKSPLSPIGILSRLQSIG-SQLGNGREEDAHEFLRYAIDTMQSVCIE 689
              N++L  +    + +     +   S  ++ G  +L    + D  EF R  +D +++    
Sbjct:   233 SNIVLAMQRVFYELQMASEAVETNSLTRAFGWDKLDAFNQHDVQEFCRVLLDNLET---- 288

Query:   690 EAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEE 749
                    G  E+++  I   F G ++S IKC     +S R E   D+ + + G + +LE 
Sbjct:   289 ----KMKGTSEEKS--IPNLFRGNMKSYIKCLDVDYESSRTESFYDVQLNVLG-MDSLER 341

Query:   750 ALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
             A   YT +EILD ENKY        ++A+K +  VE P IL + L RFQ
Sbjct:   342 AFEAYTTSEILDDENKYDAGD-HGLQRAEKGVKFVELPPILHVQLMRFQ 389


>CGD|CAL0004185 [details] [associations]
            symbol:DOT4 species:5476 "Candida albicans" [GO:0030446
            "hyphal cell wall" evidence=IDA] [GO:0009986 "cell surface"
            evidence=IDA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA] [GO:0016579
            "protein deubiquitination" evidence=IEA] [GO:0006348 "chromatin
            silencing at telomere" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00973 PROSITE:PS50235
            CGD:CAL0004185 GO:GO:0009986 GO:GO:0006511 GO:GO:0030446
            GO:GO:0004221 EMBL:AACQ01000191 eggNOG:COG5560 KO:K11873
            RefSeq:XP_711590.1 ProteinModelPortal:Q59PG8 STRING:Q59PG8
            GeneID:3646810 KEGG:cal:CaO19.3370 Uniprot:Q59PG8
        Length = 735

 Score = 144 (55.7 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
 Identities = 49/178 (27%), Positives = 78/178 (43%)

Query:   577 NWNKV--ELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCEL 634
             NW ++  +  P GL+N G +CY N  +Q +   P +  Y      +K    K    T  L
Sbjct:   367 NWRELANKKPPVGLLNHGVTCYMNSAIQSIIHIPAMQHYLNDVNDNKYSQLKPRSVTHVL 426

Query:   635 ENLILRA---------KDGKSP-----LSPIGILSRLQSIGSQLGNGREEDAHEFLRYAI 680
               L  R          K GKS      ++P  I+ RL  I   +   ++ED+HE+    I
Sbjct:   427 AELSKRMWLASNTNNNKKGKSNGGIKYINPKKIIQRLDEINCMMSEWQQEDSHEYYMSLI 486

Query:   681 DTMQSVCIEEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTV 738
               +Q    E++     G   +E+ +  + FGG L  +I C KCH  S  ++   DL++
Sbjct:   487 SRLQ----EDS--TPKGKKLNESIIYDI-FGGLLNQRITCHKCHNVSITKQEFYDLSL 537

 Score = 77 (32.2 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
 Identities = 17/58 (29%), Positives = 32/58 (55%)

Query:   746 NLEEALRRYTGTEIL-----DGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
             ++E+++  +   E++     D ++ Y C++C  +  A K  +I  AP  LTI  KRF+
Sbjct:   582 SVEKSINDFFSNEVIKKSENDSKSGYFCEKCNRFTHANKISSIEIAPETLTIHFKRFK 639


>UNIPROTKB|Q59PG8 [details] [associations]
            symbol:DOT4 "Putative uncharacterized protein UBP10"
            species:237561 "Candida albicans SC5314" [GO:0009986 "cell surface"
            evidence=IDA] [GO:0030446 "hyphal cell wall" evidence=IDA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00973
            PROSITE:PS50235 CGD:CAL0004185 GO:GO:0009986 GO:GO:0006511
            GO:GO:0030446 GO:GO:0004221 EMBL:AACQ01000191 eggNOG:COG5560
            KO:K11873 RefSeq:XP_711590.1 ProteinModelPortal:Q59PG8
            STRING:Q59PG8 GeneID:3646810 KEGG:cal:CaO19.3370 Uniprot:Q59PG8
        Length = 735

 Score = 144 (55.7 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
 Identities = 49/178 (27%), Positives = 78/178 (43%)

Query:   577 NWNKV--ELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCEL 634
             NW ++  +  P GL+N G +CY N  +Q +   P +  Y      +K    K    T  L
Sbjct:   367 NWRELANKKPPVGLLNHGVTCYMNSAIQSIIHIPAMQHYLNDVNDNKYSQLKPRSVTHVL 426

Query:   635 ENLILRA---------KDGKSP-----LSPIGILSRLQSIGSQLGNGREEDAHEFLRYAI 680
               L  R          K GKS      ++P  I+ RL  I   +   ++ED+HE+    I
Sbjct:   427 AELSKRMWLASNTNNNKKGKSNGGIKYINPKKIIQRLDEINCMMSEWQQEDSHEYYMSLI 486

Query:   681 DTMQSVCIEEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTV 738
               +Q    E++     G   +E+ +  + FGG L  +I C KCH  S  ++   DL++
Sbjct:   487 SRLQ----EDS--TPKGKKLNESIIYDI-FGGLLNQRITCHKCHNVSITKQEFYDLSL 537

 Score = 77 (32.2 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
 Identities = 17/58 (29%), Positives = 32/58 (55%)

Query:   746 NLEEALRRYTGTEIL-----DGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
             ++E+++  +   E++     D ++ Y C++C  +  A K  +I  AP  LTI  KRF+
Sbjct:   582 SVEKSINDFFSNEVIKKSENDSKSGYFCEKCNRFTHANKISSIEIAPETLTIHFKRFK 639


>UNIPROTKB|J9PBI4 [details] [associations]
            symbol:USP15 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR013792 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 GO:GO:0008234
            GO:GO:0006511 SUPFAM:SSF55205 GO:GO:0004221
            GeneTree:ENSGT00670000097750 EMBL:AAEX03006985
            Ensembl:ENSCAFT00000048170 Uniprot:J9PBI4
        Length = 953

 Score = 128 (50.1 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
 Identities = 60/235 (25%), Positives = 103/235 (43%)

Query:   461 VCSNGLNISGGTSLRFEKSNIVTNDIGSSSNFVGMPSVPSVRSERFDNVQRSSAMSAQIE 520
             +C NG N++   + RF K++ + + I      +   ++P  +  R  N   S+       
Sbjct:   139 LCENG-NMNNVVTRRFSKADTI-DTIEKEIRKIF--NIPDEKETRLWNKYMSNTFEPL-- 192

Query:   521 NSP-SNVGN-GLKTSLWKAVDQFRGSKSSKQCLSVGCETAG-RYSDKGLFSYELFVKLYN 577
             N P S + + GL       ++Q    K+       G      + S+  L SY  + K Y+
Sbjct:   193 NKPDSTIQDAGLYQGQVLVIEQ----KNEDGTWPRGPSAPNVKNSNYCLPSYTAY-KNYD 247

Query:   578 WNKV---ELQP--CGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECA-KKDWCFT 631
             +++      QP  CGL N GN+C+ N  +QCL+ TPPLT YFL   + +E          
Sbjct:   248 YSEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMR 307

Query:   632 CELEN----LILRAKDGK-SPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAID 681
              E+      LI +   GK S ++P    +++     Q    +++D  E L + +D
Sbjct:   308 GEIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLD 362

 Score = 96 (38.9 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
 Identities = 18/51 (35%), Positives = 30/51 (58%)

Query:   747 LEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             L++ +  +T  E L  E+ + C  CK +++A KKL +   P +L + LKRF
Sbjct:   760 LKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRF 810


>SGD|S000002476 [details] [associations]
            symbol:DOA4 "Ubiquitin isopeptidase" species:4932
            "Saccharomyces cerevisiae" [GO:0004843 "ubiquitin-specific protease
            activity" evidence=IMP;IDA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0016579 "protein deubiquitination"
            evidence=TAS] [GO:0006897 "endocytosis" evidence=IMP] [GO:0005739
            "mitochondrion" evidence=IDA] [GO:0006275 "regulation of DNA
            replication" evidence=IMP] [GO:0004175 "endopeptidase activity"
            evidence=IGI;IPI] [GO:0000502 "proteasome complex" evidence=IPI]
            [GO:0010995 "free ubiquitin chain depolymerization" evidence=IDA]
            [GO:0010992 "ubiquitin homeostasis" evidence=IMP] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0016020 "membrane"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0006508 "proteolysis" evidence=IEA] [GO:0005768 "endosome"
            evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA;IMP]
            [GO:0043162 "ubiquitin-dependent protein catabolic process via the
            multivesicular body sorting pathway" evidence=IMP] [GO:0031902
            "late endosome membrane" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 SGD:S000002476 GO:GO:0005739 GO:GO:0006275
            GO:GO:0031902 GO:GO:0005768 GO:GO:0006897 EMBL:BK006938
            GO:GO:0004175 Gene3D:3.40.250.10 InterPro:IPR001763 SMART:SM00450
            SUPFAM:SSF52821 PROSITE:PS50206 GO:GO:0000502 EMBL:Z46796
            EMBL:X84162 EMBL:Z49209 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            eggNOG:COG5533 GO:GO:0043162 GO:GO:0010992 RefSeq:NP_010354.3
            GeneID:851641 KEGG:sce:YDR069C KO:K11839 RefSeq:NP_010358.3
            GeneID:851645 KEGG:sce:YDR073W KO:K11774
            GeneTree:ENSGT00670000097591 OrthoDB:EOG4HX88F EMBL:U02518
            EMBL:L08070 EMBL:Z74365 PIR:S39344 ProteinModelPortal:P32571
            SMR:P32571 DIP:DIP-5298N IntAct:P32571 MINT:MINT-550253
            STRING:P32571 MEROPS:C19.005 PaxDb:P32571 EnsemblFungi:YDR069C
            CYGD:YDR069c HOGENOM:HOG000248489 OMA:YIVFYER NextBio:969209
            Genevestigator:P32571 GermOnline:YDR069C GO:GO:0010995
            Uniprot:P32571
        Length = 926

 Score = 114 (45.2 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
 Identities = 29/101 (28%), Positives = 50/101 (49%)

Query:   701 DETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEI--EGDIGNL--EEALRRYTG 756
             D + ++ L F G   S++KC  C   S   +    L++ I  +    N+  E+  R +T 
Sbjct:   714 DFSVIVDL-FQGQYASRLKCKVCSHTSTTYQPFTVLSIPIPKKNSRNNITIEDCFREFTK 772

Query:   757 TEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
              E L+ + ++ C  C+  + + K+LTI   P  L + LKRF
Sbjct:   773 CENLEVDEQWLCPHCEKRQPSTKQLTITRLPRNLIVHLKRF 813

 Score = 109 (43.4 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
 Identities = 35/126 (27%), Positives = 59/126 (46%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSK------ECAKKDWC--FTCELENLI 638
             GL N GNSCY N ++QC+  T  LT  FL   ++K      +   K     +   L +++
Sbjct:   563 GLENLGNSCYMNCIIQCILGTHELTQIFLDDSYAKHININSKLGSKGILAKYFARLVHMM 622

Query:   639 LRAK-DG--KSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNA 695
              + + DG  K  +SPI       S+ S      ++D  EF ++ +D +    + + G N 
Sbjct:   623 YKEQVDGSKKISISPIKFKLACGSVNSLFKTASQQDCQEFCQFLLDGLHED-LNQCGSNP 681

Query:   696 SGPLED 701
               PL++
Sbjct:   682 --PLKE 685


>WB|WBGene00009267 [details] [associations]
            symbol:usp-48 species:6239 "Caenorhabditis elegans"
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0000003 "reproduction" evidence=IMP] [GO:0040011
            "locomotion" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
            development" evidence=IMP] [GO:0008340 "determination of adult
            lifespan" evidence=IMP] [GO:0042127 "regulation of cell
            proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
            evidence=IMP] [GO:0040027 "negative regulation of vulval
            development" evidence=IMP] [GO:0006915 "apoptotic process"
            evidence=IMP] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008340
            GO:GO:0006915 GO:GO:0008234 GO:GO:0040011 GO:GO:0042127
            GO:GO:0040035 GO:GO:0006511 EMBL:Z81048 GO:GO:0040027 GO:GO:0040020
            GO:GO:0004221 HSSP:Q93009 EMBL:Z81072 GeneTree:ENSGT00630000089581
            PIR:T19899 RefSeq:NP_492524.2 ProteinModelPortal:G5ECC7 SMR:G5ECC7
            EnsemblMetazoa:F30A10.10 GeneID:172782 KEGG:cel:CELE_F30A10.10
            CTD:172782 WormBase:F30A10.10 OMA:EDICMEC NextBio:876981
            Uniprot:G5ECC7
        Length = 1262

 Score = 173 (66.0 bits), Expect = 4.6e-09, P = 4.6e-09
 Identities = 65/222 (29%), Positives = 102/222 (45%)

Query:   584 QPCGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKD 643
             QP GLIN GN CY N  LQ + F  P     +      E           ++  +L  +D
Sbjct:   106 QPAGLINGGNFCYVNSFLQ-VWFNVPEFRQLIYDFRPSENFVPPEAPRMNVQATMLALQD 164

Query:   644 GKSPL--SPIGILSRLQSIGSQLG-NGREEDAHEF-LRYAIDTMQSVCIEEAGVNASGPL 699
                 L  +P     +  ++G  L  N  ++D+ EF L++  + ++  C+ +   + +G  
Sbjct:   165 IFYTLQTTPFNETDKTSNLGKLLRLNSEQQDSQEFGLKF-FNALER-CLPD---HPNGK- 218

Query:   700 EDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEI 759
             E    L  L F G   ++I C KC  +SER+E  + LT+ IEG    L +AL  Y G E 
Sbjct:   219 ETLKRLKDL-FTGETCTRIVC-KCGQRSEREETAISLTLNIEGYC-TLLDALDAYFGEEH 275

Query:   760 LDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFS 801
             LD    +KC +C       K+   V+ P ++ I L R++  S
Sbjct:   276 LDD---FKCSKCNKTGDVSKQSDYVKLPPVIVIQLNRYKYTS 314


>RGD|1305621 [details] [associations]
            symbol:Usp20 "ubiquitin specific peptidase 20" species:10116
            "Rattus norvegicus" [GO:0001664 "G-protein coupled receptor
            binding" evidence=IEA;ISO] [GO:0004197 "cysteine-type endopeptidase
            activity" evidence=IEA;ISO] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA;ISO] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0008277 "regulation of G-protein coupled
            receptor protein signaling pathway" evidence=IEA;ISO] [GO:0016579
            "protein deubiquitination" evidence=ISO] [GO:0070536 "protein
            K63-linked deubiquitination" evidence=IEA;ISO] [GO:0071108 "protein
            K48-linked deubiquitination" evidence=IEA;ISO] InterPro:IPR001394
            InterPro:IPR001607 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 Pfam:PF06337 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 PROSITE:PS51283
            SMART:SM00695 RGD:1305621 GO:GO:0046872 GO:GO:0008270
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277
            GO:GO:0071108 GO:GO:0070536 GO:GO:0004197 GO:GO:0004221
            EMBL:CH474001 CTD:10868 GeneTree:ENSGT00690000101718 KO:K11848
            OMA:ADYGQIS OrthoDB:EOG4D52WZ IPI:IPI00869542 RefSeq:NP_001101297.1
            Ensembl:ENSRNOT00000010786 GeneID:311856 KEGG:rno:311856
            UCSC:RGD:1305621 NextBio:664327 Uniprot:D3ZLQ8
        Length = 915

 Score = 118 (46.6 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
 Identities = 40/127 (31%), Positives = 59/127 (46%)

Query:   582 ELQPCGLI---NCGNSCYANVVLQCLAFTPPLTAYFLQ--GLHSKECAKKDWCFTCELEN 636
             +L+P GL    N GNSCY N  LQ L+  PPLT +FL+  GL   +  K   C +   + 
Sbjct:   138 DLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTD-KKPALCKS--YQK 194

Query:   637 LILRAKDGKSP--LSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVN 694
             LI      K P  + P  +   ++ +        ++D  EFLR  +D +    ++E  V 
Sbjct:   195 LISEVWHKKRPSYVVPTSLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEE-LKEPMVA 253

Query:   695 ASGPLED 701
             A   L D
Sbjct:   254 AVAALTD 260

 Score = 104 (41.7 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
 Identities = 20/57 (35%), Positives = 30/57 (52%)

Query:   742 GDIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
             G +  LE+ L  +   + L G+N Y C+RCK      K   ++  P IL + LKRF+
Sbjct:   535 GPVVTLEDCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLCLPEILCVHLKRFR 591

 Score = 59 (25.8 bits), Expect = 0.00022, Sum P(2) = 0.00022
 Identities = 15/50 (30%), Positives = 24/50 (48%)

Query:   704 TLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEG--DIGNLEEAL 751
             ++I   F G + S ++C  C   S   E   DL++ I G  D+  L  A+
Sbjct:   444 SVISDVFNGSVLSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHSAI 493


>MGI|MGI:1921520 [details] [associations]
            symbol:Usp20 "ubiquitin specific peptidase 20" species:10090
            "Mus musculus" [GO:0001664 "G-protein coupled receptor binding"
            evidence=ISO] [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=ISO] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=ISO] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508 "proteolysis"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0008270 "zinc
            ion binding" evidence=IEA] [GO:0008277 "regulation of G-protein
            coupled receptor protein signaling pathway" evidence=ISO]
            [GO:0016579 "protein deubiquitination" evidence=ISO] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA] [GO:0070536 "protein K63-linked deubiquitination"
            evidence=ISO] [GO:0071108 "protein K48-linked deubiquitination"
            evidence=ISO] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 MGI:MGI:1921520
            GO:GO:0048471 GO:GO:0046872 GO:GO:0008270 GO:GO:0006897
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 EMBL:CH466542
            GO:GO:0008277 GO:GO:0071108 GO:GO:0070536 GO:GO:0004197
            GO:GO:0004221 EMBL:AL844546 HSSP:Q93009 eggNOG:COG5560 CTD:10868
            GeneTree:ENSGT00690000101718 HOGENOM:HOG000286031
            HOVERGEN:HBG054196 KO:K11848 OMA:ADYGQIS OrthoDB:EOG4D52WZ
            MEROPS:C19.025 EMBL:AF449715 EMBL:AK173083 EMBL:AK054279
            EMBL:AK163663 EMBL:BC079674 IPI:IPI00469997 RefSeq:NP_083122.1
            UniGene:Mm.346654 ProteinModelPortal:Q8C6M1 SMR:Q8C6M1
            PhosphoSite:Q8C6M1 PRIDE:Q8C6M1 Ensembl:ENSMUST00000102849
            Ensembl:ENSMUST00000170476 GeneID:74270 KEGG:mmu:74270
            UCSC:uc008jde.2 InParanoid:Q8C6M1 NextBio:340299 Bgee:Q8C6M1
            Genevestigator:Q8C6M1 Uniprot:Q8C6M1
        Length = 916

 Score = 118 (46.6 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
 Identities = 40/127 (31%), Positives = 59/127 (46%)

Query:   582 ELQPCGLI---NCGNSCYANVVLQCLAFTPPLTAYFLQ--GLHSKECAKKDWCFTCELEN 636
             +L+P GL    N GNSCY N  LQ L+  PPLT +FL+  GL   +  K   C +   + 
Sbjct:   138 DLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTD-KKPALCKS--YQK 194

Query:   637 LILRAKDGKSP--LSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVN 694
             LI      K P  + P  +   ++ +        ++D  EFLR  +D +    ++E  V 
Sbjct:   195 LISEVWHKKRPSYVVPTSLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEE-LKEPMVA 253

Query:   695 ASGPLED 701
             A   L D
Sbjct:   254 AVAALTD 260

 Score = 104 (41.7 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
 Identities = 20/57 (35%), Positives = 30/57 (52%)

Query:   742 GDIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
             G +  LE+ L  +   + L G+N Y C+RCK      K   ++  P IL + LKRF+
Sbjct:   536 GPVVTLEDCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLCLPEILCVHLKRFR 592

 Score = 59 (25.8 bits), Expect = 0.00022, Sum P(2) = 0.00022
 Identities = 15/50 (30%), Positives = 24/50 (48%)

Query:   704 TLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEG--DIGNLEEAL 751
             ++I   F G + S ++C  C   S   E   DL++ I G  D+  L  A+
Sbjct:   445 SVISDVFNGSVLSLVQCLTCDRVSTTVETFQDLSLPIPGKEDLAKLHSAI 494


>UNIPROTKB|F1NQJ6 [details] [associations]
            symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0000278 "mitotic cell cycle" evidence=IEA]
            [GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0006281 "DNA
            repair" evidence=IEA] [GO:0016578 "histone deubiquitination"
            evidence=IEA] [GO:0031647 "regulation of protein stability"
            evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872 GO:GO:0008270
            GO:GO:0006281 GO:GO:0008234 GO:GO:0031647 GO:GO:0000790
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0016578
            GO:GO:0004221 GO:GO:0000278 GeneTree:ENSGT00690000102047
            OMA:DCLRSFT EMBL:AADN02040443 IPI:IPI00579359
            Ensembl:ENSGALT00000005420 Uniprot:F1NQJ6
        Length = 521

 Score = 148 (57.2 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
 Identities = 38/130 (29%), Positives = 66/130 (50%)

Query:   684 QSVCIEE-AGVNASGP--LEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEI 740
             +SV ++E + + AS    +   +T++   FGG L++++ C  C  +S + +  +DL+++I
Sbjct:   286 RSVILQENSSLTASSKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDI 345

Query:   741 EGDIGN-------------LEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAP 787
                  N             L + LR +T  E LD    Y C +CK  +K+ KK  I + P
Sbjct:   346 PSQFRNKRTKNQENGPMCTLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQKLP 405

Query:   788 NILTIALKRF 797
              +L + LKRF
Sbjct:   406 KVLCLHLKRF 415

 Score = 101 (40.6 bits), Expect = 0.00068, Sum P(2) = 0.00068
 Identities = 30/116 (25%), Positives = 60/116 (51%)

Query:   646 SPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTM------------QSVCIEE-AG 692
             SP S   ++ ++    S  G  +++DAHEF+RY +D +            +SV ++E + 
Sbjct:   237 SPESLFYVVWKIMPNFSSRGY-QQQDAHEFMRYLLDHLHLELQGGFNGVSRSVILQENSS 295

Query:   693 VNASGP--LEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGN 746
             + AS    +   +T++   FGG L++++ C  C  +S + +  +DL+++I     N
Sbjct:   296 LTASSKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSLDIPSQFRN 351

 Score = 66 (28.3 bits), Expect = 5.7e-09, Sum P(2) = 5.7e-09
 Identities = 14/38 (36%), Positives = 19/38 (50%)

Query:   577 NWNKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYF 614
             N +   L   GL N GN+C+ N +LQ L+       YF
Sbjct:   149 NGSTTALCATGLRNLGNTCFMNAILQSLSNIQQFCCYF 186

 Score = 38 (18.4 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
 Identities = 18/59 (30%), Positives = 25/59 (42%)

Query:   528 NGLKTSLWKAVDQFRGSKSSKQCLSVGCETAGRY-SDKGLFSYE-LFVKLYNWNKVELQ 584
             N L +S   +V   R +KS   CL+      GRY +      YE   + + N  K E Q
Sbjct:    20 NVLPSSFCNSV--CRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQIPMTNHKKTEKQ 76


>UNIPROTKB|E2R988 [details] [associations]
            symbol:USP15 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0060389
            "pathway-restricted SMAD protein phosphorylation" evidence=IEA]
            [GO:0046332 "SMAD binding" evidence=IEA] [GO:0035520
            "monoubiquitinated protein deubiquitination" evidence=IEA]
            [GO:0030509 "BMP signaling pathway" evidence=IEA] [GO:0007179
            "transforming growth factor beta receptor signaling pathway"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005160 "transforming growth factor
            beta receptor binding" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA] [GO:0004197
            "cysteine-type endopeptidase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR013792
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695
            GO:GO:0008234 GO:GO:0006511 SUPFAM:SSF55205 GO:GO:0016579
            GO:GO:0004221 GeneTree:ENSGT00670000097750 OMA:RMDPLAK
            EMBL:AAEX03006985 Ensembl:ENSCAFT00000000496 Uniprot:E2R988
        Length = 982

 Score = 126 (49.4 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
 Identities = 34/106 (32%), Positives = 52/106 (49%)

Query:   584 QP--CGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECA-KKDWCFTCELEN---- 636
             QP  CGL N GN+C+ N  +QCL+ TPPLT YFL   + +E           E+      
Sbjct:   286 QPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAE 345

Query:   637 LILRAKDGK-SPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAID 681
             LI +   GK S ++P    +++     Q    +++D  E L + +D
Sbjct:   346 LIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLD 391

 Score = 96 (38.9 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
 Identities = 18/51 (35%), Positives = 30/51 (58%)

Query:   747 LEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             L++ +  +T  E L  E+ + C  CK +++A KKL +   P +L + LKRF
Sbjct:   789 LKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRF 839


>UNIPROTKB|F1SKD5 [details] [associations]
            symbol:LOC100737425 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR013792 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 GO:GO:0008234
            GO:GO:0006511 SUPFAM:SSF55205 GO:GO:0004221
            GeneTree:ENSGT00670000097750 OMA:RMDPLAK EMBL:AEMK01054830
            EMBL:AEMK01054840 EMBL:CU570842 EMBL:CU856603 EMBL:CU928889
            Ensembl:ENSSSCT00000000493 Uniprot:F1SKD5
        Length = 982

 Score = 126 (49.4 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
 Identities = 34/106 (32%), Positives = 52/106 (49%)

Query:   584 QP--CGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECA-KKDWCFTCELEN---- 636
             QP  CGL N GN+C+ N  +QCL+ TPPLT YFL   + +E           E+      
Sbjct:   286 QPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAE 345

Query:   637 LILRAKDGK-SPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAID 681
             LI +   GK S ++P    +++     Q    +++D  E L + +D
Sbjct:   346 LIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLD 391

 Score = 96 (38.9 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
 Identities = 18/51 (35%), Positives = 30/51 (58%)

Query:   747 LEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             L++ +  +T  E L  E+ + C  CK +++A KKL +   P +L + LKRF
Sbjct:   789 LKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRF 839


>FB|FBgn0033738 [details] [associations]
            symbol:CG8830 species:7227 "Drosophila melanogaster"
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS50235 EMBL:AE013599 GO:GO:0006511
            GO:GO:0004221 eggNOG:COG5533 GeneTree:ENSGT00650000093027 KO:K11854
            EMBL:BT010041 RefSeq:NP_610784.1 RefSeq:NP_725167.1
            UniGene:Dm.18735 SMR:Q7JQI1 MEROPS:C19.A27
            EnsemblMetazoa:FBtr0087950 EnsemblMetazoa:FBtr0087951 GeneID:36361
            KEGG:dme:Dmel_CG8830 UCSC:CG8830-RA FlyBase:FBgn0033738
            InParanoid:Q7JQI1 OMA:QIALMHH OrthoDB:EOG48KPS4 GenomeRNAi:36361
            NextBio:798127 Uniprot:Q7JQI1
        Length = 852

 Score = 129 (50.5 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
 Identities = 31/117 (26%), Positives = 58/117 (49%)

Query:   692 GVNASGPLEDET---TLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEI---EGDIG 745
             G+   G   D+    + I  TF G L +  +C  C  +S  ++   +L +     + D G
Sbjct:   524 GLKQQGQQVDQAKPPSTIDKTFAGKLSTTYRCLNCGWESRNEDSFRELQLSFPDDKEDCG 583

Query:   746 ----NLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
                 ++++ +  Y   E LDG+N+Y C +CK    A++ + + +AP  L + LK+F+
Sbjct:   584 ATNYSVQDLIEYYCSPEKLDGDNQYFCPQCKKLCDAERHIGVTQAPKNLILTLKQFK 640

 Score = 91 (37.1 bits), Expect = 6.6e-09, Sum P(2) = 6.6e-09
 Identities = 32/114 (28%), Positives = 53/114 (46%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGKS 646
             GL+N GN+CY N VLQ LA    +T+ F + +   EC           + + L     + 
Sbjct:   359 GLVNLGNTCYMNSVLQALA----MTSDFSRQILLIEC--NSVLLMKVQQQIALMHHSLRY 412

Query:   647 PLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGV--NASGP 698
              L+P  +L+  +        G ++D+ EFL Y +D +    I  + V  ++ GP
Sbjct:   413 ELTPSRVLNATRP--PSFTPGLQQDSSEFLGYLLDLLHEHEINSSSVTGHSVGP 464


>UNIPROTKB|Q5R5Z6 [details] [associations]
            symbol:USP20 "Ubiquitin carboxyl-terminal hydrolase 20"
            species:9601 "Pongo abelii" [GO:0004197 "cysteine-type
            endopeptidase activity" evidence=ISS] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0008277 "regulation of
            G-protein coupled receptor protein signaling pathway" evidence=ISS]
            [GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0070536
            "protein K63-linked deubiquitination" evidence=ISS] [GO:0071108
            "protein K48-linked deubiquitination" evidence=ISS]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            PROSITE:PS51283 SMART:SM00695 GO:GO:0048471 GO:GO:0046872
            GO:GO:0008270 GO:GO:0006897 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0008277 GO:GO:0071108 GO:GO:0070536
            GO:GO:0004197 GO:GO:0004221 CTD:10868 HOGENOM:HOG000286031
            HOVERGEN:HBG054196 KO:K11848 EMBL:CR860704 RefSeq:NP_001126647.1
            UniGene:Pab.18678 ProteinModelPortal:Q5R5Z6 SMR:Q5R5Z6
            GeneID:100173645 KEGG:pon:100173645 InParanoid:Q5R5Z6
            Uniprot:Q5R5Z6
        Length = 913

 Score = 112 (44.5 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
 Identities = 34/109 (31%), Positives = 52/109 (47%)

Query:   582 ELQPCGLI---NCGNSCYANVVLQCLAFTPPLTAYFLQ--GLHSKECAKKDWCFTCELEN 636
             +L+P GL    N GNSCY N  LQ L+  PPLT +FL+  GL   +  K   C +   + 
Sbjct:   137 DLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTD-KKPALCKS--YQK 193

Query:   637 LILRAKDGKSP--LSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTM 683
             L+      K P  + P  +   ++ +        ++D  EFLR  +D +
Sbjct:   194 LVSEVWHKKRPSYVVPTSLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQL 242

 Score = 109 (43.4 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
 Identities = 21/57 (36%), Positives = 30/57 (52%)

Query:   742 GDIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
             G +  LE+ L  +   + L G+N Y C+RCK      K   ++  P IL I LKRF+
Sbjct:   533 GPVVTLEDCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFR 589


>UNIPROTKB|Q9Y2K6 [details] [associations]
            symbol:USP20 "Ubiquitin carboxyl-terminal hydrolase 20"
            species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA]
            [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IDA] [GO:0070536
            "protein K63-linked deubiquitination" evidence=IDA] [GO:0004197
            "cysteine-type endopeptidase activity" evidence=IMP] [GO:0008277
            "regulation of G-protein coupled receptor protein signaling
            pathway" evidence=IMP] [GO:0001664 "G-protein coupled receptor
            binding" evidence=IPI] [GO:0016579 "protein deubiquitination"
            evidence=IDA] [GO:0071108 "protein K48-linked deubiquitination"
            evidence=IDA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 GO:GO:0048471
            GO:GO:0046872 GO:GO:0008270 EMBL:CH471090 GO:GO:0006897
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277
            GO:GO:0071108 GO:GO:0070536 GO:GO:0004197 GO:GO:0004221
            EMBL:AL158207 eggNOG:COG5560 CTD:10868 HOGENOM:HOG000286031
            HOVERGEN:HBG054196 KO:K11848 OMA:ADYGQIS OrthoDB:EOG4D52WZ
            EMBL:AY074877 EMBL:AB023220 EMBL:BC039593 EMBL:Y17457 EMBL:Y17459
            IPI:IPI00328285 RefSeq:NP_001008563.2 RefSeq:NP_001103773.2
            RefSeq:NP_006667.3 UniGene:Hs.5452 ProteinModelPortal:Q9Y2K6
            SMR:Q9Y2K6 IntAct:Q9Y2K6 STRING:Q9Y2K6 MEROPS:C19.025
            PhosphoSite:Q9Y2K6 DMDM:116242837 PRIDE:Q9Y2K6
            Ensembl:ENST00000315480 Ensembl:ENST00000358355
            Ensembl:ENST00000372429 GeneID:10868 KEGG:hsa:10868 UCSC:uc004byr.2
            GeneCards:GC09P132596 H-InvDB:HIX0008459 HGNC:HGNC:12619
            HPA:HPA006287 neXtProt:NX_Q9Y2K6 PharmGKB:PA37245 InParanoid:Q9Y2K6
            PhylomeDB:Q9Y2K6 ChiTaRS:USP20 GenomeRNAi:10868 NextBio:41265
            ArrayExpress:Q9Y2K6 Bgee:Q9Y2K6 CleanEx:HS_USP20
            Genevestigator:Q9Y2K6 GermOnline:ENSG00000136878 Uniprot:Q9Y2K6
        Length = 914

 Score = 112 (44.5 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
 Identities = 34/109 (31%), Positives = 52/109 (47%)

Query:   582 ELQPCGLI---NCGNSCYANVVLQCLAFTPPLTAYFLQ--GLHSKECAKKDWCFTCELEN 636
             +L+P GL    N GNSCY N  LQ L+  PPLT +FL+  GL   +  K   C +   + 
Sbjct:   138 DLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTD-KKPALCKS--YQK 194

Query:   637 LILRAKDGKSP--LSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTM 683
             L+      K P  + P  +   ++ +        ++D  EFLR  +D +
Sbjct:   195 LVSEVWHKKRPSYVVPTSLSHGIKLVNPMFRGYAQQDTQEFLRCLMDQL 243

 Score = 109 (43.4 bits), Expect = 7.1e-09, Sum P(2) = 7.1e-09
 Identities = 21/57 (36%), Positives = 30/57 (52%)

Query:   742 GDIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
             G +  LE+ L  +   + L G+N Y C+RCK      K   ++  P IL I LKRF+
Sbjct:   534 GPVVTLEDCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFR 590


>UNIPROTKB|E1BWB2 [details] [associations]
            symbol:USP33 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0001664 "G-protein coupled receptor binding"
            evidence=IEA] [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0008277
            "regulation of G-protein coupled receptor protein signaling
            pathway" evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
            [GO:0044297 "cell body" evidence=IEA] [GO:0070536 "protein
            K63-linked deubiquitination" evidence=IEA] [GO:0071108 "protein
            K48-linked deubiquitination" evidence=IEA] InterPro:IPR001394
            InterPro:IPR001607 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 Pfam:PF06337 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 PROSITE:PS51283
            SMART:SM00695 GO:GO:0016477 GO:GO:0046872 GO:GO:0008270
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277
            GO:GO:0071108 GO:GO:0070536 GO:GO:0004197 GO:GO:0044297
            GO:GO:0004221 GeneTree:ENSGT00690000101718 KO:K11848 CTD:23032
            EMBL:AADN02012750 IPI:IPI00598742 RefSeq:XP_422389.2
            UniGene:Gga.26668 ProteinModelPortal:E1BWB2
            Ensembl:ENSGALT00000014598 GeneID:424553 KEGG:gga:424553
            NextBio:20826873 Uniprot:E1BWB2
        Length = 910

 Score = 122 (48.0 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
 Identities = 34/100 (34%), Positives = 50/100 (50%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQ--GLHSKECAKKDWCFTCELENLI-LRAKD 643
             GL N GN+CY N  LQ L+  PPLT +FL   GL   +  KK       L+ +  L  K+
Sbjct:   153 GLKNIGNTCYMNAALQALSNCPPLTHFFLDCGGLARTD--KKPAICKSYLKLMTELWHKN 210

Query:   644 GKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTM 683
                 + P G+   ++S+        ++DA EFLR  +D +
Sbjct:   211 RPGSVVPTGLFQGIKSVNPTFRGYSQQDAQEFLRCLMDLL 250

 Score = 98 (39.6 bits), Expect = 8.2e-09, Sum P(2) = 8.2e-09
 Identities = 20/57 (35%), Positives = 29/57 (50%)

Query:   742 GDIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
             G +  L++ L  +   + L G+N Y C RCK      K   + + P IL I LKRF+
Sbjct:   532 GPVVTLQDCLAAFFARDELKGDNMYSCGRCKKLRNGVKFCKVQKFPEILCIHLKRFR 588

 Score = 56 (24.8 bits), Expect = 0.00017, Sum P(2) = 0.00017
 Identities = 15/49 (30%), Positives = 23/49 (46%)

Query:   704 TLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEG--DIGNLEEA 750
             ++I   F G + S ++C  C   S   E   DL++ I G  D+  L  A
Sbjct:   441 SVISDIFDGTIISSVQCLTCDRLSVTLETFQDLSLPIPGKEDLAKLHSA 489


>UNIPROTKB|C5FEI4 [details] [associations]
            symbol:MCYG_01106 "Ubiquitin C-terminal hydrolase CreB"
            species:554155 "Arthroderma otae CBS 113480" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=ISS]
            [GO:0045013 "carbon catabolite repression of transcription"
            evidence=ISS] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0006511 GO:GO:0004221
            OrthoDB:EOG43XZCS GO:GO:0045013 EMBL:DS995701 RefSeq:XP_002851002.1
            GeneID:9228463 Uniprot:C5FEI4
        Length = 796

 Score = 168 (64.2 bits), Expect = 8.8e-09, P = 8.8e-09
 Identities = 41/118 (34%), Positives = 63/118 (53%)

Query:   682 TMQSVCIEEA-GVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEI 740
             T  SV    A  V A  P    T  +   F G L S+ +C  C  KS+R E  +DL+V++
Sbjct:   200 TSTSVATTLATSVGAKTPYN--TRWVHELFEGKLTSETECLTCEKKSQRDEVFLDLSVDL 257

Query:   741 EGDIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
             E    ++   LR+++  E+L   NK+ CD C   ++A+K++ I   P IL + LKRF+
Sbjct:   258 EQH-SSVTSCLRKFSEEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHLKRFK 314


>UNIPROTKB|D4D3J1 [details] [associations]
            symbol:TRV_01651 "Ubiquitin C-terminal hydrolase CreB"
            species:663202 "Trichophyton verrucosum HKI 0517" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISS] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=ISS]
            [GO:0045013 "carbon catabolite repression of transcription"
            evidence=ISS] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0006511 GO:GO:0004221
            KO:K11872 GO:GO:0045013 EMBL:ACYE01000084 RefSeq:XP_003024218.1
            GeneID:9579256 KEGG:tve:TRV_01651 Uniprot:D4D3J1
        Length = 876

 Score = 173 (66.0 bits), Expect = 9.4e-09, Sum P(2) = 9.4e-09
 Identities = 42/131 (32%), Positives = 68/131 (51%)

Query:   669 EEDAHEFLRYAIDTMQSVCIEEA-GVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKS 727
             E DA      A  T  +  +  + G +A  P    T  +   F G L S+ +C  C  KS
Sbjct:   256 EADADSESSTATSTSVATTLATSVGGSAKSPYS--TRWVHELFEGKLTSETECLTCEKKS 313

Query:   728 ERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAP 787
             +R E  +DL+V++E    ++   LR+++  E+L   NK+ CD C   ++A+K++ I   P
Sbjct:   314 QRDEAFLDLSVDLEQH-SSVTSCLRKFSQEEMLCERNKFHCDNCGGLQEAEKRMKIKRLP 372

Query:   788 NILTIALKRFQ 798
              IL + LKRF+
Sbjct:   373 RILALHLKRFK 383

 Score = 44 (20.5 bits), Expect = 9.4e-09, Sum P(2) = 9.4e-09
 Identities = 7/14 (50%), Positives = 10/14 (71%)

Query:   596 YANVVLQCLAFTPP 609
             Y N +LQCL ++ P
Sbjct:    70 YCNSILQCLYYSAP 83


>UNIPROTKB|Q9NVE5 [details] [associations]
            symbol:USP40 "Ubiquitin carboxyl-terminal hydrolase 40"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            eggNOG:COG5077 EMBL:AJ583821 EMBL:AK001647 EMBL:AK124094
            EMBL:AC019221 EMBL:AC019072 EMBL:BC067300 IPI:IPI00373874
            IPI:IPI00398007 IPI:IPI00947085 RefSeq:NP_060688.1 UniGene:Hs.96513
            ProteinModelPortal:Q9NVE5 SMR:Q9NVE5 STRING:Q9NVE5 MEROPS:C19.069
            PhosphoSite:Q9NVE5 DMDM:59803114 PaxDb:Q9NVE5 PRIDE:Q9NVE5
            Ensembl:ENST00000251722 Ensembl:ENST00000409945
            Ensembl:ENST00000427112 Ensembl:ENST00000450966 GeneID:55230
            KEGG:hsa:55230 UCSC:uc002vuo.1 UCSC:uc010zmr.2 CTD:55230
            GeneCards:GC02M234384 HGNC:HGNC:20069 HPA:HPA005821 MIM:610570
            neXtProt:NX_Q9NVE5 PharmGKB:PA134909324 HOGENOM:HOG000154760
            HOVERGEN:HBG079302 InParanoid:Q9NVE5 KO:K11869 OMA:NLKPFCE
            OrthoDB:EOG4PVNXZ ChiTaRS:USP40 GenomeRNAi:55230 NextBio:59237
            ArrayExpress:Q9NVE5 Bgee:Q9NVE5 CleanEx:HS_USP40
            Genevestigator:Q9NVE5 GermOnline:ENSG00000085982 Uniprot:Q9NVE5
        Length = 1235

 Score = 170 (64.9 bits), Expect = 9.5e-09, P = 9.5e-09
 Identities = 66/221 (29%), Positives = 97/221 (43%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLT-AYFLQGLHS----KECAKKDW---CFTCELENLI 638
             G+ N G +CY N +LQ L FTP    A F  G       ++  K D        +L+ L 
Sbjct:    42 GIRNQGGTCYLNSLLQTLHFTPEFREALFSLGPEELGLFEDKDKPDAKVRIIPLQLQRLF 101

Query:   639 LRAKDGKSPLSPIGILSRLQSIG-SQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASG 697
              +        +    L+   S G +     R+ D  E  R     +     E + V  SG
Sbjct:   102 AQLLLLDQEAASTADLT--DSFGWTSNEEMRQHDVQELNRILFSAL-----ETSLVGTSG 154

Query:   698 PLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEAL-RRYTG 756
                D   LI   + G + ++I C +C   SERQE  +DLTV ++ ++  LE+AL   Y  
Sbjct:   155 --HD---LIYRLYHGTIVNQIVCKECKNVSERQEDFLDLTVAVK-NVSGLEDALWNMYVE 208

Query:   757 TEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
              E+ D +N Y C  C    KA K   + + P  LT++L RF
Sbjct:   209 EEVFDCDNLYHCGTCDRLVKAAKSAKLRKLPPFLTVSLLRF 249


>UNIPROTKB|I3L7M6 [details] [associations]
            symbol:USP33 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0071108 "protein K48-linked
            deubiquitination" evidence=IEA] [GO:0070536 "protein K63-linked
            deubiquitination" evidence=IEA] [GO:0044297 "cell body"
            evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
            [GO:0008277 "regulation of G-protein coupled receptor protein
            signaling pathway" evidence=IEA] [GO:0007411 "axon guidance"
            evidence=IEA] [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=IEA] [GO:0001664 "G-protein coupled receptor binding"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 GO:GO:0007411
            GO:GO:0016477 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277 GO:GO:0071108
            GO:GO:0070536 GO:GO:0004197 GO:GO:0044297 GO:GO:0004221
            GeneTree:ENSGT00690000101718 OMA:TMEEDKS EMBL:CU915644
            Ensembl:ENSSSCT00000026836 Uniprot:I3L7M6
        Length = 901

 Score = 121 (47.7 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
 Identities = 36/122 (29%), Positives = 59/122 (48%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQ--GLHSKECAKKDWC--FTCELENLILRAK 642
             GL N GN+CY N  LQ L+  PPLT +FL   GL   +  KK  C  +   +  L  +++
Sbjct:   155 GLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTD--KKPACKSYLKLMTELWHKSR 212

Query:   643 DGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDE 702
              G   + P  +   ++++        ++DA EFLR  +D +    ++E  +     L+  
Sbjct:   213 PGS--VVPTNLFQGIKTVNPTFRGYSQQDAQEFLRCLMDLLHEE-LKEQVMEVEENLQTV 269

Query:   703 TT 704
             TT
Sbjct:   270 TT 271

 Score = 98 (39.6 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
 Identities = 19/57 (33%), Positives = 30/57 (52%)

Query:   742 GDIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
             G +  L++ L  +   + L G+N Y C++CK      K   + + P IL I LKRF+
Sbjct:   525 GPVVTLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFR 581

 Score = 53 (23.7 bits), Expect = 0.00041, Sum P(2) = 0.00041
 Identities = 14/49 (28%), Positives = 23/49 (46%)

Query:   704 TLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEG--DIGNLEEA 750
             ++I   F G + S ++C  C   S   E   DL++ I G  D+  L  +
Sbjct:   442 SVISDIFDGTIISSVQCLTCDRVSVTLETFQDLSLPIPGKEDLAKLHSS 490


>DICTYBASE|DDB_G0284381 [details] [associations]
            symbol:DDB_G0284381 "putative ubiquitin
            carboxyl-terminal hydrolase (UCH)" species:44689 "Dictyostelium
            discoideum" [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] InterPro:IPR001394 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695
            dictyBase:DDB_G0284381 GO:GO:0008234 GO:GO:0006511
            EMBL:AAFI02000064 GO:GO:0004221 eggNOG:COG5560 KO:K11835
            RefSeq:XP_638597.1 ProteinModelPortal:Q54PQ7
            EnsemblProtists:DDB0237697 GeneID:8624568 KEGG:ddi:DDB_G0284381
            OMA:AYELPHA Uniprot:Q54PQ7
        Length = 1089

 Score = 112 (44.5 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
 Identities = 30/101 (29%), Positives = 50/101 (49%)

Query:   586 CGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWC-FTCELENLILRA-KD 643
             CGL N GN+C+ N  +QCLA T PL  YFL G +  +  K +      ++ ++  +  KD
Sbjct:   403 CGLSNLGNTCFMNSSIQCLAHTGPLVEYFLSGRYLGDINKTNPLGMKGQIADIYGKLMKD 462

Query:   644 ---GKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAID 681
                G S ++P  +   +     Q     ++D+ E L + +D
Sbjct:   463 MWSGSSCVAPKHLKWIIGKYAPQFSGISQQDSQELLSFLLD 503

 Score = 109 (43.4 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
 Identities = 25/69 (36%), Positives = 40/69 (57%)

Query:   730 QERMMDLTVEIEGDIGNLEEALRRYTGTEILDGENKYKCDRCKSY-EKAKKKLTIVEAPN 788
             Q++ + L  E   +I  L + L+ YT +E L   + + C +CK++ E + KKL +  AP 
Sbjct:   908 QDKSIQLKTEFRNEI-TLNDCLQLYTKSEKLGTNDTWYCPQCKAHIEGSMKKLELWSAPK 966

Query:   789 ILTIALKRF 797
             IL + LKRF
Sbjct:   967 ILVVHLKRF 975


>FB|FBgn0030366 [details] [associations]
            symbol:Usp7 "Ubiquitin-specific protease 7" species:7227
            "Drosophila melanogaster" [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006342 "chromatin
            silencing" evidence=IGI] [GO:0043234 "protein complex"
            evidence=IPI] [GO:0035328 "transcriptionally silent chromatin"
            evidence=IDA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISS;IDA] [GO:0016578 "histone deubiquitination"
            evidence=IDA] [GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0016579
            "protein deubiquitination" evidence=ISS] [GO:0005700 "polytene
            chromosome" evidence=IDA] InterPro:IPR001394 InterPro:IPR002083
            InterPro:IPR008974 InterPro:IPR018200 Pfam:PF00443 Pfam:PF00917
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50144 PROSITE:PS50235
            SMART:SM00061 GO:GO:0005634 GO:GO:0043234 EMBL:AE014298
            GO:GO:0006511 GO:GO:0006342 GO:GO:0005700 GO:GO:0016578
            GO:GO:0004843 GO:GO:0004221 SUPFAM:SSF49599 HSSP:Q93009
            eggNOG:COG5077 KO:K11838 InterPro:IPR024729 Pfam:PF12436
            GeneTree:ENSGT00630000089581 CTD:7874 EMBL:BT044531
            RefSeq:NP_572779.2 UniGene:Dm.3592 ProteinModelPortal:Q9VYQ8
            SMR:Q9VYQ8 IntAct:Q9VYQ8 MINT:MINT-805769 STRING:Q9VYQ8
            MEROPS:C19.A52 PaxDb:Q9VYQ8 PRIDE:Q9VYQ8 EnsemblMetazoa:FBtr0073641
            GeneID:32169 KEGG:dme:Dmel_CG1490 FlyBase:FBgn0030366
            InParanoid:Q9VYQ8 OMA:THIPENE OrthoDB:EOG4NVX16 PhylomeDB:Q9VYQ8
            ChiTaRS:USP7 GenomeRNAi:32169 NextBio:777232 Bgee:Q9VYQ8
            GermOnline:CG1490 GO:GO:0035328 Uniprot:Q9VYQ8
        Length = 1129

 Score = 169 (64.5 bits), Expect = 1.1e-08, P = 1.1e-08
 Identities = 62/213 (29%), Positives = 94/213 (44%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLILRAKDGKS 646
             GL N G +CY N +LQ L FT  L     +     + + K       L+ +    + G  
Sbjct:   242 GLKNQGATCYMNSLLQTLYFTNSLRLSVYRIPTEADDSSKS--VGLSLQRVFHELQFGDR 299

Query:   647 PLSPIGILSRLQSIGSQ-LGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTL 705
             P   +G     +S G + L +  + D  EFLR  +D ++S           G +  E T+
Sbjct:   300 P---VGTKKLTKSFGWETLDSFMQHDVQEFLRVLLDKLES--------KMKGTIL-EGTI 347

Query:   706 IGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDGENK 765
              GL F G + S IKC      S R E   D+ + I+ D  N+ E+ + Y   E L+G+NK
Sbjct:   348 PGL-FEGKMSSYIKCKNVDYNSTRYETFYDIQLNIK-DKKNIYESFQDYVAPETLEGDNK 405

Query:   766 YKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
             Y        ++A K +     P +L + L RFQ
Sbjct:   406 YDAG-VHGLQEASKGVIFTSFPPVLHLHLMRFQ 437


>ZFIN|ZDB-GENE-040426-1219 [details] [associations]
            symbol:usp20 "ubiquitin specific protease 20"
            species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA;ISS] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0004197 "cysteine-type endopeptidase
            activity" evidence=ISS] [GO:0008277 "regulation of G-protein
            coupled receptor protein signaling pathway" evidence=ISS]
            [GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0070536
            "protein K63-linked deubiquitination" evidence=ISS] [GO:0071108
            "protein K48-linked deubiquitination" evidence=ISS] [GO:0021551
            "central nervous system morphogenesis" evidence=IMP] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0006508 "proteolysis"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
            [GO:0006897 "endocytosis" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            PROSITE:PS51283 SMART:SM00695 ZFIN:ZDB-GENE-040426-1219
            GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221 GO:GO:0021551
            GeneTree:ENSGT00690000101718 OMA:ADYGQIS EMBL:BX927184
            IPI:IPI00920034 Ensembl:ENSDART00000006021 ArrayExpress:F1QTS8
            Bgee:F1QTS8 Uniprot:F1QTS8
        Length = 913

 Score = 112 (44.5 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
 Identities = 36/125 (28%), Positives = 54/125 (43%)

Query:   582 ELQPCGLI---NCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECAKKDWCFTCELENLI 638
             EL+P GL    N GNSCY N  LQ L+  PPLT +F Q         K        + LI
Sbjct:   141 ELKPRGLTGMKNIGNSCYMNAALQALSNCPPLTQFF-QDCSGLVRTDKKPALCKSYQKLI 199

Query:   639 LRAKDGKSP--LSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNAS 696
                   K P  + P  +   ++ +        ++D  EFLR  +D +    ++E   + S
Sbjct:   200 SELWHKKRPSYVVPTTLFHGIKLVNPMFRGYAQQDTQEFLRCLMDQLHEE-LKEPLFDCS 258

Query:   697 GPLED 701
             G + +
Sbjct:   259 GGISE 263

 Score = 107 (42.7 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
 Identities = 21/57 (36%), Positives = 30/57 (52%)

Query:   742 GDIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
             G +  LE+ L  +   + L G+N Y C+RCK      K   ++  P IL I LKRF+
Sbjct:   534 GPMVTLEDCLAAFFAADELKGDNMYSCERCKKLRNGVKYCKVLRLPEILCIHLKRFR 590


>UNIPROTKB|E1C6Z2 [details] [associations]
            symbol:USP35 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00650000093027 CTD:57558 KO:K11854 OMA:EREQCLA
            EMBL:AADN02004267 EMBL:AADN02004268 IPI:IPI00592556
            RefSeq:XP_417222.2 Ensembl:ENSGALT00000027919 GeneID:419030
            KEGG:gga:419030 NextBio:20822142 Uniprot:E1C6Z2
        Length = 997

 Score = 128 (50.1 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
 Identities = 50/176 (28%), Positives = 73/176 (41%)

Query:   579 NKVELQPCGLINCGNSCYANVVLQCLAFTPPLTAYFL---QGLHSKECAKKDWCFTCELE 635
             +K E    GLIN GN+CY N V+Q L          L   +G       K  W F   LE
Sbjct:   438 SKSETGKIGLINLGNTCYMNSVIQSLFMASDFRHSVLNLTEGNSQPLMTKLQWLFAF-LE 496

Query:   636 NLILRAKDGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNA 695
             +        +  +SP    S   S       G ++D  E+L+Y +D +     E+ G   
Sbjct:   497 H------SQRPAISPESFFSA--SWPPWFTPGAQQDCSEYLKYLLDRLHEE--EKTGKRI 546

Query:   696 SGPLEDET-------------TLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTV 738
                L++ +             TLI   FGG + +KI+C KC   S R+E   DL++
Sbjct:   547 YQKLKESSLMSQAMEHHSLNKTLIEKMFGGKMMTKIRCLKCLNISSREEAFTDLSL 602

 Score = 96 (38.9 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
 Identities = 19/60 (31%), Positives = 32/60 (53%)

Query:   743 DIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQVFSP 802
             D  ++ + +  +   E L  +NKY C++C S + A+K   + E P+ L + L RF  F P
Sbjct:   702 DSRSVPDLINYFLSPERLTADNKYHCEKCASLQDAEKVAELTEGPHYLILTLLRFS-FDP 760

 Score = 40 (19.1 bits), Expect = 1.2e-08, Sum P(3) = 1.2e-08
 Identities = 14/41 (34%), Positives = 19/41 (46%)

Query:    71 QHPQCAVCFSPTTT-RCARCKAVRYCSGKCQIVHWRQGHKD 110
             QHPQC     PT   +   C+ +  C G+ Q V   +G  D
Sbjct:   153 QHPQCI----PTGKHQVLFCQQLIRCIGQFQCVS--EGEDD 187


>DICTYBASE|DDB_G0289611 [details] [associations]
            symbol:usp40 "putative ubiquitin carboxyl-terminal
            hydrolase (UCH)" species:44689 "Dictyostelium discoideum"
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0008233
            "peptidase activity" evidence=IEA] [GO:0006508 "proteolysis"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            dictyBase:DDB_G0289611 GO:GO:0008234 GenomeReviews:CM000154_GR
            GO:GO:0006511 GO:GO:0004221 EMBL:AAFI02000147 eggNOG:COG5077
            KO:K11869 RefSeq:XP_636128.1 ProteinModelPortal:Q54H96
            EnsemblProtists:DDB0237742 GeneID:8627231 KEGG:ddi:DDB_G0289611
            OMA:EEQDIRI Uniprot:Q54H96
        Length = 1677

 Score = 160 (61.4 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
 Identities = 42/138 (30%), Positives = 71/138 (51%)

Query:   661 GSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDETTLIGLTFGGYLRSKIKC 720
             GSQ  +  ++D HE  R   D ++   I++       P+E   TL    + GY  +++ C
Sbjct:   425 GSQ--SFHQQDIHELNRVLFDAVEH-SIKKT------PIE---TLFNDLYKGYFVNRLTC 472

Query:   721 TKCHGKSERQERMMDLTVEIEGDIGNLEEAL-RRYTGTEILDGENKYKCDRCKSYEKAKK 779
             TKC    + QE   D+ + ++G   ++EE+L   ++  E LDG N Y C++C     A  
Sbjct:   473 TKCGTIKDSQEHFQDIPIGVKG-FNSIEESLVGSFSTPETLDGRNMYSCEKCNEKVVATF 531

Query:   780 KLTIVEAPNILTIALKRF 797
             ++ + + P IL  AL+RF
Sbjct:   532 QVKLGKIPKILIFALRRF 549

 Score = 63 (27.2 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
 Identities = 12/24 (50%), Positives = 16/24 (66%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPL 610
             GL+N G +CY N ++Q L  TP L
Sbjct:    54 GLLNQGATCYLNSLIQMLYMTPEL 77


>UNIPROTKB|E1C718 [details] [associations]
            symbol:USP15 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004197 "cysteine-type
            endopeptidase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA] [GO:0005160
            "transforming growth factor beta receptor binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0007179 "transforming growth factor beta receptor
            signaling pathway" evidence=IEA] [GO:0030509 "BMP signaling
            pathway" evidence=IEA] [GO:0035520 "monoubiquitinated protein
            deubiquitination" evidence=IEA] [GO:0046332 "SMAD binding"
            evidence=IEA] [GO:0060389 "pathway-restricted SMAD protein
            phosphorylation" evidence=IEA] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR013792 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 GO:GO:0008234
            GO:GO:0006511 SUPFAM:SSF55205 GO:GO:0016579 GO:GO:0004221
            GeneTree:ENSGT00670000097750 OMA:RMDPLAK EMBL:AADN02009940
            EMBL:AADN02009941 IPI:IPI00580087 Ensembl:ENSGALT00000015894
            Uniprot:E1C718
        Length = 981

 Score = 126 (49.4 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
 Identities = 34/106 (32%), Positives = 52/106 (49%)

Query:   584 QP--CGLINCGNSCYANVVLQCLAFTPPLTAYFLQGLHSKECA-KKDWCFTCELEN---- 636
             QP  CGL N GN+C+ N  +QCL+ TPPLT YFL   + +E           E+      
Sbjct:   284 QPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAE 343

Query:   637 LILRAKDGK-SPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAID 681
             LI +   GK S ++P    +++     Q    +++D  E L + +D
Sbjct:   344 LIKQMWSGKYSYVTPRAFKTQVGRFAPQFSGYQQQDCQELLAFLLD 389

 Score = 96 (38.9 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
 Identities = 18/51 (35%), Positives = 30/51 (58%)

Query:   747 LEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             L++ +  +T  E L  E+ + C  CK +++A KKL +   P +L + LKRF
Sbjct:   787 LKDCIELFTTKEKLGAEDPWYCPNCKEHQQATKKLDLWSLPPVLVVHLKRF 837

 Score = 41 (19.5 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
 Identities = 6/12 (50%), Positives = 9/12 (75%)

Query:   687 CIEEAGVNASGP 698
             C +E G+N +GP
Sbjct:   631 CCKEHGINGNGP 642


>MGI|MGI:2443184 [details] [associations]
            symbol:Usp40 "ubiquitin specific peptidase 40" species:10090
            "Mus musculus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 MGI:MGI:2443184 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 eggNOG:COG5077 GeneTree:ENSGT00630000089581
            MEROPS:C19.069 CTD:55230 HOVERGEN:HBG079302 KO:K11869 OMA:NLKPFCE
            OrthoDB:EOG4PVNXZ EMBL:AK050239 EMBL:AK132295 EMBL:AK165849
            EMBL:AK166303 EMBL:BC089376 EMBL:BC117957 EMBL:BC117958
            IPI:IPI00761550 IPI:IPI00816992 IPI:IPI00817031 IPI:IPI00817048
            RefSeq:NP_001028463.1 RefSeq:NP_001185502.1 UniGene:Mm.80484
            ProteinModelPortal:Q8BWR4 SMR:Q8BWR4 PhosphoSite:Q8BWR4
            PaxDb:Q8BWR4 PRIDE:Q8BWR4 Ensembl:ENSMUST00000040783 GeneID:227334
            KEGG:mmu:227334 UCSC:uc007bxw.1 UCSC:uc007bxx.1 UCSC:uc007bxy.1
            UCSC:uc007bxz.1 InParanoid:Q8BWR4 NextBio:378568 Bgee:Q8BWR4
            CleanEx:MM_USP40 Genevestigator:Q8BWR4 Uniprot:Q8BWR4
        Length = 1235

 Score = 168 (64.2 bits), Expect = 1.6e-08, P = 1.6e-08
 Identities = 65/215 (30%), Positives = 94/215 (43%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLT-AYFLQG---LHSKECAKKDWCFTCELENLILRAK 642
             G+ N G +CY + +LQ L FTP    A F  G   L S E   K       +  L L+  
Sbjct:    42 GIRNQGGTCYLSSLLQTLHFTPEFREALFSLGPEELGSLEDKDKPDA-KVRIIPLQLQRL 100

Query:   643 DGKSPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTMQSVCIEEAGVNASGPLEDE 702
               +  L      S +    S  G   +E+  +     ++ +    +E + V  SG   D 
Sbjct:   101 FAQLLLLDQEAASTIDLTDS-FGWTNDEEMRQHDVQELNRILFSALETSLVGTSG--HD- 156

Query:   703 TTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEGDIGNLEEALRRYTGTEILDG 762
               LI   + G + ++I C +C   SERQE  +DLTV ++   G  +E    Y   EI D 
Sbjct:   157 --LIHRLYHGTIVNQIVCKECKNISERQEDFLDLTVAVKNVSGLEDELCNMYVEEEIFDY 214

Query:   763 ENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRF 797
             +N Y C  C    KA K   + + P  LTI+L RF
Sbjct:   215 DNLYHCGTCDRLVKAAKSAKLRKLPPFLTISLLRF 249


>ZFIN|ZDB-GENE-040426-2323 [details] [associations]
            symbol:usp33 "ubiquitin specific peptidase 33"
            species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA;ISS] [GO:0008270 "zinc ion binding"
            evidence=IEA;ISS] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0016477 "cell migration"
            evidence=ISS] [GO:0008277 "regulation of G-protein coupled receptor
            protein signaling pathway" evidence=ISS] [GO:0007411 "axon
            guidance" evidence=ISS] [GO:0004197 "cysteine-type endopeptidase
            activity" evidence=ISS] [GO:0016579 "protein deubiquitination"
            evidence=ISS] [GO:0070536 "protein K63-linked deubiquitination"
            evidence=ISS] [GO:0071108 "protein K48-linked deubiquitination"
            evidence=ISS] [GO:0046872 "metal ion binding" evidence=IEA]
            [GO:0006897 "endocytosis" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0048471 "perinuclear region of
            cytoplasm" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695
            ZFIN:ZDB-GENE-040426-2323 GO:GO:0048471 GO:GO:0007411 GO:GO:0016477
            GO:GO:0046872 GO:GO:0008270 GO:GO:0006897 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277 GO:GO:0071108
            GO:GO:0070536 GO:GO:0004197 GO:GO:0004221 eggNOG:COG5560
            GeneTree:ENSGT00690000101718 HOGENOM:HOG000286031
            HOVERGEN:HBG054196 KO:K11848 MEROPS:C19.037 CTD:23032 OMA:TMEEDKS
            OrthoDB:EOG4B8JC9 EMBL:BX649634 EMBL:BC066557 IPI:IPI00512747
            RefSeq:NP_998392.1 UniGene:Dr.32515 ProteinModelPortal:A5PMR2
            SMR:A5PMR2 Ensembl:ENSDART00000018114 GeneID:406508 KEGG:dre:406508
            NextBio:20818084 ArrayExpress:A5PMR2 Bgee:A5PMR2 Uniprot:A5PMR2
        Length = 897

 Score = 118 (46.6 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
 Identities = 30/98 (30%), Positives = 49/98 (50%)

Query:   587 GLINCGNSCYANVVLQCLAFTPPLTAYFLQ-GLHSKECAKKDWCFTCELENLILRAKDGK 645
             GL N GN+CY N  LQ L+  PPLT +FL+ G   K   K   C + +     L  K+  
Sbjct:   157 GLKNIGNTCYMNAALQALSNCPPLTQFFLECGGLVKTDKKPALCKSYQKLITDLWHKNRN 216

Query:   646 SPLSPIGILSRLQSIGSQLGNGREEDAHEFLRYAIDTM 683
             + + P  +   ++++        ++D+ EFLR  +D +
Sbjct:   217 AYVVPTNLFQGIKAVNPMFRGYSQQDSQEFLRCLMDQL 254

 Score = 99 (39.9 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
 Identities = 31/119 (26%), Positives = 54/119 (45%)

Query:   685 SVCIEEAGVNASGPLEDETTLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVE-IE-- 741
             SV +E    + S P+  +  L  L    +  + +K   C G++   +  +   +E I+  
Sbjct:   459 SVTLENFQ-DISLPIPGKEDLAKLHSSSHQTALVKAGSC-GEAYAPQGWIAFVMEYIKSW 516

Query:   742 --GDIGNLEEALRRYTGTEILDGENKYKCDRCKSYEKAKKKLTIVEAPNILTIALKRFQ 798
               G +  L++ L  +   + L G+N Y C++CK      K   +   P IL I LKRF+
Sbjct:   517 FWGPVVTLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQSLPEILCIHLKRFR 575

 Score = 55 (24.4 bits), Expect = 0.00053, Sum P(2) = 0.00053
 Identities = 13/49 (26%), Positives = 23/49 (46%)

Query:   704 TLIGLTFGGYLRSKIKCTKCHGKSERQERMMDLTVEIEG--DIGNLEEA 750
             ++I   F G + S ++C  C   S   E   D+++ I G  D+  L  +
Sbjct:   436 SIISEVFDGTIVSSVQCLTCDRVSVTLENFQDISLPIPGKEDLAKLHSS 484

WARNING:  HSPs involving 243 database sequences were not reported due to the
          limiting value of parameter B = 250.


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.316   0.133   0.399    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      807       673    0.0010  120 3  11 22  0.42    34
                                                     36  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  493
  No. of states in DFA:  623 (66 KB)
  Total size of DFA:  373 KB (2183 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  54.92u 0.12s 55.04t   Elapsed:  00:00:03
  Total cpu time:  54.96u 0.12s 55.08t   Elapsed:  00:00:03
  Start:  Mon May 20 21:26:10 2013   End:  Mon May 20 21:26:13 2013
WARNINGS ISSUED:  2

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