Your job contains 1 sequence.
>003625
MAPFPAENGVEGDDEREEEEEEDEDEEEEEEEEEEEPRLKYQRMGGSLPSLLANDAASCV
AVAERMIALGTHAGTVHILDFLGNQVKEFPAHTAAVNDLSFDVDGEYVGSCSDDGSVVIN
SLFTDEKMKFDYHRPMKAISLDPDYTRKMSRRFVAGGLAGHLYLNSKKWLGYRDQVLHSG
EGPVHVVKWRTSLIAWANDAGVKVYDAANDQRITFIERPRGSPRPELLLPHLVWQDDTLL
VIGWGTYIKIASIKTNQSNVANGTYRHVGMNQVDIVASFQTSYYISGIAPFGDCLVVLAY
IPGEEDGEKEFSSTLPSRQGNAQRPEVRIVTWNNDELTTDALPVLGFEHYKAKDYSLAHA
PFSGSSYAGGQWAAGDEPLYYIVSPKDVVIAKPRDAEDHIAWLLEHGWHEKALAAVEAGQ
GRSELLDEVGSRYLDHLIVERKYAEAASLCPKLLRGSASAWERWVFHFAHLRQLPVLVPY
MPTENPRLRDTAYEVALVALATNPSFHKYLLSTVKSWPPVIYSALPVISAIEPQLNSSSM
TDALKEALAELYVIDGHYEKAFSLYADLMKPYIFDFIENHNLHDAIREKVVQLMLLDCKR
AVSLLIQNKDLITPSEVVTQLLNARDKCDSRYFLHLYLHALFEVNPHAGKDFHDMQVELY
ADYDLKMLLPFLRSSQHYTLEKAYEICVKRDLLREQVFILGRMGNTKHALAVIINKLGDI
EEAVEFVNMQHDDELWEELIKQCLNKPEMVGVLLEHTVGNLDPLYIVNMVPNGLEIPRLR
DRLVKIITDYRTETSLRHGCNDILKVL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 003625
(807 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2200008 - symbol:VPS41 "AT1G08190" species:370... 3410 0. 1
DICTYBASE|DDB_G0286803 - symbol:vps41 "7-fold repeat in c... 1438 3.1e-147 1
UNIPROTKB|F1SSB8 - symbol:VPS41 "Uncharacterized protein"... 832 4.2e-145 2
MGI|MGI:1929215 - symbol:Vps41 "vacuolar protein sorting ... 848 8.8e-145 2
UNIPROTKB|P49754 - symbol:VPS41 "Vacuolar protein sorting... 844 1.1e-144 2
UNIPROTKB|A3KN15 - symbol:VPS41 "VPS41 protein" species:9... 840 1.1e-144 2
UNIPROTKB|E2R6C3 - symbol:VPS41 "Uncharacterized protein"... 838 6.1e-144 2
ZFIN|ZDB-GENE-030131-6671 - symbol:vps41 "vacuolar protei... 815 1.1e-142 2
UNIPROTKB|F1NMR8 - symbol:VPS41 "Uncharacterized protein"... 821 6.3e-140 2
UNIPROTKB|E9PF36 - symbol:VPS41 "Vacuolar protein sorting... 844 9.2e-137 3
UNIPROTKB|Q5ZL70 - symbol:VPS41 "Uncharacterized protein"... 821 6.0e-133 2
RGD|1560511 - symbol:Vps41 "vacuolar protein sorting 41 h... 727 5.3e-132 2
FB|FBgn0002566 - symbol:lt "light" species:7227 "Drosophi... 579 3.1e-95 2
UNIPROTKB|Q618H8 - symbol:vps-41 "Vacuolar protein sortin... 728 5.3e-72 1
WB|WBGene00017974 - symbol:vps-41 species:6239 "Caenorhab... 710 4.3e-70 1
UNIPROTKB|Q19954 - symbol:vps-41 "Vacuolar protein sortin... 710 4.3e-70 1
POMBASE|SPAP27G11.05c - symbol:vps41 "HOPS complex subuni... 663 4.1e-65 1
ASPGD|ASPL0000073993 - symbol:vps41 species:162425 "Emeri... 273 5.6e-63 7
UNIPROTKB|G4N984 - symbol:MGG_03313 "Vacuolar assembly pr... 302 1.5e-51 6
SGD|S000002487 - symbol:VPS41 "Subunit of the HOPS comple... 220 1.8e-39 3
UNIPROTKB|H7BZX6 - symbol:VPS41 "Vacuolar protein sorting... 261 2.1e-21 1
UNIPROTKB|H7C0K2 - symbol:VPS41 "Vacuolar protein sorting... 223 2.5e-17 1
UNIPROTKB|C9J2U9 - symbol:VPS41 "Vacuolar protein sorting... 146 4.4e-09 1
>TAIR|locus:2200008 [details] [associations]
symbol:VPS41 "AT1G08190" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006623 "protein targeting to vacuole"
evidence=TAS] [GO:0009630 "gravitropism" evidence=IMP]
InterPro:IPR001841 InterPro:IPR000547 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00637 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00184 SMART:SM00299 SMART:SM00320
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0016192
Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0008270 GO:GO:0009630
GO:GO:0005622 InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0006623
EMBL:AC011438 EMBL:U86663 IPI:IPI00537887 RefSeq:NP_172297.2
UniGene:At.21938 UniGene:At.27391 UniGene:At.69135
ProteinModelPortal:P93043 SMR:P93043 STRING:P93043 PaxDb:P93043
PRIDE:P93043 EnsemblPlants:AT1G08190.1 GeneID:837340
KEGG:ath:AT1G08190 GeneFarm:3731 TAIR:At1g08190 eggNOG:NOG285467
HOGENOM:HOG000247002 InParanoid:P93043 OMA:NLIAWAN PhylomeDB:P93043
ProtClustDB:CLSN2680689 Genevestigator:P93043 GermOnline:AT1G08190
InterPro:IPR016902 PIRSF:PIRSF028921 Uniprot:P93043
Length = 980
Score = 3410 (1205.4 bits), Expect = 0., P = 0.
Identities = 652/783 (83%), Positives = 707/783 (90%)
Query: 37 PRLKYQRMGGSLPSLLANDAASCVAVAERMIALGTHAGTVHILDFLGNQVKEFPAHTAAV 96
PRLKYQRMGG++P+LL+NDAASC+AVA RMIALGTH GTV ILD LGNQVKEF AHTA V
Sbjct: 42 PRLKYQRMGGNVPALLSNDAASCIAVAARMIALGTHDGTVRILDLLGNQVKEFRAHTAPV 101
Query: 97 NDLSFDVDGEYVGSCSDDGSVVINSLFTD-EKMKFDYHRPMKAISLDPDYTRKMSRRFVA 155
ND++FD +GEY+GSCSDDGSVVINSLFTD EKMKFDYHRPMKAISLDPDYT+K S+RFVA
Sbjct: 102 NDINFDTEGEYIGSCSDDGSVVINSLFTDDEKMKFDYHRPMKAISLDPDYTKKQSKRFVA 161
Query: 156 GGLAGHLYLNSKKWLGYRDQVLHSGEGPVHVVKWRTSLIAWANDAGVKVYDAANDQRITF 215
GGLAGHLY+NSKKW G +DQVLHSGEGP+H VKWR SLIAWAND GVKVYD A DQR+TF
Sbjct: 162 GGLAGHLYMNSKKWFGNKDQVLHSGEGPIHSVKWRGSLIAWANDVGVKVYDTAKDQRVTF 221
Query: 216 IERPRGSPRPELLLPHLVWQDDTLLVIGWGTYIKIASIKTNQSNVANGTYRHVGMN---Q 272
IE+PRGSPRPE LLPHLVWQDDTLLVIGWGT +KIASIK++Q GT+R + M+ Q
Sbjct: 222 IEKPRGSPRPEALLPHLVWQDDTLLVIGWGTSVKIASIKSDQQQT--GTFRQIQMSSLTQ 279
Query: 273 VDIVASFQTSYYISGIAPFGDCLVVLAYIPGEEDGEKEFSSTLP-SRQGNAQRPEVRIVT 331
VDIVASFQTSYYISGIAPFGD LV+LAYIP E DGEKEFSST SRQGNAQRPE+RIV+
Sbjct: 280 VDIVASFQTSYYISGIAPFGDSLVILAYIPIEGDGEKEFSSTTTLSRQGNAQRPEIRIVS 339
Query: 332 WNNDELTTDALPVLGFEHYKAKDYSLAHAPFSGSSYAGGQWAAGDEPLYYIVSPKDVVIA 391
WNNDELT DALPV GFEHYKAKDYSLAHAPF GSSYAGGQWAAGDEPLYYIVSPKDVVIA
Sbjct: 340 WNNDELTMDALPVHGFEHYKAKDYSLAHAPFPGSSYAGGQWAAGDEPLYYIVSPKDVVIA 399
Query: 392 KPRDAEDHIAWLLEHGWHEKALAAVEAGQGRSELLDEVGSRYLDHLIVERKYAEAASLCP 451
KPRDAEDHI WLL+HG+HEKALAAVEA +GR+EL+D+VG+ YLDHLIVERKYAEAASLCP
Sbjct: 400 KPRDAEDHINWLLQHGFHEKALAAVEASEGRTELIDKVGAGYLDHLIVERKYAEAASLCP 459
Query: 452 KLLRGSASAWERWVFHFAHLRQLPVLVPYMPTENPRLRDTAYEVALVALATNPSFHKYLL 511
KLLRGSASAWERWVFHFA LRQLPVLVPYMPT+NPRL+DT YEVALVALATNPS+HK LL
Sbjct: 460 KLLRGSASAWERWVFHFAQLRQLPVLVPYMPTDNPRLKDTVYEVALVALATNPSYHKELL 519
Query: 512 STVKSWPPVIYSALPVISAIEPQLNSSSMTDALKEALAELYVIDGHYEKAFSLYADLMKP 571
S VKSWP +YSAL VISAIEPQLN+SSMTDALKEALAELYVIDG Y+KAFSLYADL+KP
Sbjct: 520 SAVKSWPRSVYSALTVISAIEPQLNTSSMTDALKEALAELYVIDGQYQKAFSLYADLLKP 579
Query: 572 YIFDFIENHNLHDAIREKVVQLMLLDCKRAVSLLIQNKDLITPSEVVTQLLNARD----- 626
+FDFIE ++LH+AIR KVVQLMLLDCKRA L IQN+DLI PSEVV QLL A
Sbjct: 580 EVFDFIEKYSLHEAIRGKVVQLMLLDCKRATVLFIQNRDLIPPSEVVPQLLKAGKNPQVL 639
Query: 627 ----KCDSRYFLHLYLHALFEVNPHAGKDFHDMQVELYADYDLKMLLPFLRSSQHYTLEK 682
KCDSRY+L+LYLHALFEV+ GKDFHDMQVELYA+YD KMLLPFLRSSQHY LEK
Sbjct: 640 KAGKKCDSRYYLYLYLHALFEVSHDTGKDFHDMQVELYAEYDTKMLLPFLRSSQHYKLEK 699
Query: 683 AYEICVKRDLLREQVFILGRMGNTKHALAVIINKLGDIEEAVEFVNMQHDDELWEELIKQ 742
AYE+CVK+D LREQVF+LGRMGN K ALAVIINKLGDIEEAVEFV+MQHDD+LWEELIKQ
Sbjct: 700 AYELCVKKDFLREQVFVLGRMGNAKQALAVIINKLGDIEEAVEFVSMQHDDDLWEELIKQ 759
Query: 743 CLNKPEMVGVLLEHTVGNLDPLYIVNMVPNGLEIPRLRDRLVKIITDYRTETSLRHGCND 802
CLNKPEMVG+LLEHTVGNLDPLYIVNMVPNGLEIPRLRDRLVKI+TDYRTETSLRHGCND
Sbjct: 760 CLNKPEMVGLLLEHTVGNLDPLYIVNMVPNGLEIPRLRDRLVKIVTDYRTETSLRHGCND 819
Query: 803 ILK 805
ILK
Sbjct: 820 ILK 822
>DICTYBASE|DDB_G0286803 [details] [associations]
symbol:vps41 "7-fold repeat in clathrin and VPS
proteins repeat-containing protein" species:44689 "Dictyostelium
discoideum" [GO:0016192 "vesicle-mediated transport" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008081
"phosphoric diester hydrolase activity" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006629 "lipid
metabolic process" evidence=IEA] [GO:0042144 "vacuole fusion,
non-autophagic" evidence=ISS] [GO:0030897 "HOPS complex"
evidence=ISS] [GO:0015031 "protein transport" evidence=ISS]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001841
InterPro:IPR017986 InterPro:IPR000547 InterPro:IPR001680
InterPro:IPR015943 InterPro:IPR017946 Pfam:PF00400 Pfam:PF00637
SMART:SM00184 SMART:SM00299 SMART:SM00320 dictyBase:DDB_G0286803
GO:GO:0006886 GenomeReviews:CM000153_GR GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0015031 GO:GO:0008270
Gene3D:3.20.20.190 GO:GO:0006629 EMBL:AAFI02000089 GO:GO:0030897
GO:GO:0008081 GO:GO:0042144 InterPro:IPR019453 Pfam:PF10367
eggNOG:NOG285467 OMA:NLIAWAN InterPro:IPR016902 PIRSF:PIRSF028921
RefSeq:XP_637577.1 ProteinModelPortal:Q54LI4
EnsemblProtists:DDB0234133 GeneID:8625717 KEGG:ddi:DDB_G0286803
InParanoid:Q54LI4 ProtClustDB:CLSZ2430076 Uniprot:Q54LI4
Length = 1087
Score = 1438 (511.3 bits), Expect = 3.1e-147, P = 3.1e-147
Identities = 315/804 (39%), Positives = 463/804 (57%)
Query: 37 PRLKYQRMGGSLPSLLANDAASCVAVAERMIALGTHAGTVHILDFLGNQVKEFPAHTAAV 96
P LKY R+G + +L D+ASC+A+ + + LGTH G+V I DF GN++K + + +
Sbjct: 180 PILKYNRLGHGITEILKKDSASCMAIHPKFLVLGTHWGSVTIHDFDGNEIKRYDTQNSTI 239
Query: 97 NDLSFDVDGEYVGSCSDDGSVVINSLF-TDEKMKFDYHRPMKAISLDPDYTRKMSRRFVA 155
++ D G+Y+ SCS DG VVIN + E+ ++Y RP+ AI+LDP++T K +R+FV+
Sbjct: 240 TEIVIDPKGDYIASCSQDGKVVINPFDKSGEQFIYNYTRPITAIALDPEFTNKNTRQFVS 299
Query: 156 GGLAGHLYLNSKKWLGYRDQVLHSGEGPVHVVKWRTSLIAWANDAGVKVYDAANDQRITF 215
GG G L +NSK W ++ ++HSGEGP++ +KW IAWAND GVK+YD + + RI
Sbjct: 300 GGKQGQLVMNSKGWFRSKETIIHSGEGPIYAIKWSGIFIAWANDQGVKIYDCSTNTRIAH 359
Query: 216 IERPRGSPRPELLLPHLVWQDDTLLVIGWGTYIKIASIKTNQSNVANGTYRHVGMNQVDI 275
I R GSPR EL L W+ L+IGW +++ I T + ++ G H + I
Sbjct: 360 IPRKEGSPRGELYRCCLCWEKPNQLIIGWAKSVEVIQI-TEKVDMTTG---HT-VKIAQI 414
Query: 276 VASFQTSYYISGIAPFGDCLVVLAY-----IPGEEDGEK---------EFSSTLPS---- 317
+ F T Y+I GIAPF + LV+L Y I ++D ST P+
Sbjct: 415 MNQFNTKYWIGGIAPFAEELVILGYNDATTIEAQDDLSSVSATPKMLTNSGSTNPNTSPN 474
Query: 318 -----RQGN---AQRPEVRIVTWN-NDELTTDALPVLGFEHYKAKDYSLAHAPFSGSSYA 368
QG A +P + IV+ N +TTD L V G++HYKA DY L +
Sbjct: 475 ITGAWNQGRVDGASKPSIHIVSRKTNSSITTDNLSVNGYQHYKATDYRLDYNT------- 527
Query: 369 GGQWAAGDEPLYYIVSPKDVVIAKPRDAEDHIAWLLEHGWHEKALAAVEAGQGRSELLD- 427
DE ++YIV PKDVV AKPR+ +DH+ WL+E +++AL AVE + L
Sbjct: 528 -------DESIFYIVCPKDVVAAKPRNLDDHLTWLMEKLKYDEALDAVERDIKTIKSLPP 580
Query: 428 ----EVGSRYLDHLIVERKYAEAASLCPKLLRGSASAWERWVFHFAHLRQLPVLVPYMPT 483
EVG RY+D+L+ ++ +AASLCPK+ + WE+WV+ F +L L L Y+P
Sbjct: 581 TKIREVGERYIDYLLEKKDIRKAASLCPKICQRDPLLWEKWVYRFLNLGGLQPLCQYIPI 640
Query: 484 ENPRLRDTAYEVALVALATNPSFHKYLLSTVKSWPPVIYSALPVISAIEPQLNSSSMTDA 543
NP L YE+ L N L TV W +Y+ +I+A+E +L S +
Sbjct: 641 GNPSLSCAIYEMFLNHFLQNDP--DSFLKTVTEWSSSLYNIQAIITAVEDKL-SRQPNET 697
Query: 544 LKEALAELYVIDGHYEKAFSLYADLMKPYIFDFIENHN--LHDAIREKVVQLMLLDCKRA 601
+ ALA+LY D + EK +Y L + +F+ I + L ++I+ K++ + + A
Sbjct: 698 IMIALAQLYTYDNNMEKTLDIYLKLKRGNVFELISRYPDLLFNSIQNKIILFIDYNQNEA 757
Query: 602 VSLLIQNKDLITPSEVVTQLLNARDKCDSRYFLHLYLHALFEVNPHAGKDFHDMQVELYA 661
+ LL+ N D I VV+QL D R +LH YLH LF + H DFH++Q++LYA
Sbjct: 758 IKLLVANTDRIPIPVVVSQLK------DRREYLHRYLHTLFLKDAHIASDFHEIQIQLYA 811
Query: 662 DYDLKMLLPFLRSSQHYTLEKAYEICVKRDLLREQVFILGRMGNTKHALAVIINKLGDIE 721
Y+ ++LL FL++S HY+LEKA E C K+ L E V++LGR+GN K AL +I++KL I+
Sbjct: 812 QYEPELLLTFLKNSGHYSLEKALEECSKKQLYEEMVYLLGRIGNAKEALNLILDKLHKIK 871
Query: 722 EAVEFVNMQHDDELWEELIKQCLNKPEMVGVLLEHTVGNLDPLYIVNMVPNGLEIPRLRD 781
+AVEFV Q D+ELWE LI + +N + LLE+ N+DP+ ++ ++P +EI LRD
Sbjct: 872 DAVEFVEQQKDEELWEYLINKSMNNSLYISELLENIGSNVDPIKLIRLIPEKMEIEDLRD 931
Query: 782 RLVKIITDYRTETSLRHGCNDILK 805
RLVKI++DY + SLR GC +ILK
Sbjct: 932 RLVKILSDYNLQMSLREGCREILK 955
>UNIPROTKB|F1SSB8 [details] [associations]
symbol:VPS41 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016192 "vesicle-mediated transport" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR001841
InterPro:IPR017986 InterPro:IPR000547 InterPro:IPR011990
InterPro:IPR015943 Pfam:PF00637 PROSITE:PS50089 SMART:SM00184
SMART:SM00299 GO:GO:0006886 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:1.25.40.10 OMA:NLIAWAN InterPro:IPR016902 PIRSF:PIRSF028921
GeneTree:ENSGT00390000000481 CTD:27072 EMBL:CU640379 EMBL:CU928231
RefSeq:XP_003134954.3 UniGene:Ssc.6606 Ensembl:ENSSSCT00000018259
GeneID:100519233 KEGG:ssc:100519233 Uniprot:F1SSB8
Length = 854
Score = 832 (297.9 bits), Expect = 4.2e-145, Sum P(2) = 4.2e-145
Identities = 172/431 (39%), Positives = 259/431 (60%)
Query: 377 EPLYYIVSPKDVVIAKPRDAEDHIAWLLEHGWHEKALAAVEAGQG---RSELLDEVGSRY 433
E L+YIVSP+DVV+AK RD +DHI WLLE +E+AL A E Q R ++LD +G Y
Sbjct: 343 ESLFYIVSPRDVVVAKERDQDDHIDWLLEKKKYEEALMAAEISQKNIKRHKILD-IGLAY 401
Query: 434 LDHLIVERKYAEAASLCPKLLRGSASAWERWVFHFAHLRQLPVLVPYMPTENPRLRDTAY 493
++HL+ + +Y AA C K+L +A+ WE V+ F + QL + PY+P +P L+ Y
Sbjct: 402 INHLVEKGEYDAAARKCQKILGKNAALWEYEVYKFKEIGQLKAISPYLPRGDPVLKPLIY 461
Query: 494 EVALVALATNPSFHKYLLSTVKSWPPVIYSALPVISAIEPQLNSSSMTDALKEALAELYV 553
E+ L S ++ + ++ WP +Y+ ++ A+ L S L + LAELY
Sbjct: 462 EMTLHEFLE--SDYEGFATLIREWPGDLYNNSVIVQAVRGHLKKDSQNRTLLKTLAELYT 519
Query: 554 IDGHYEKAFSLYADLMKPYIFDFIENHNLHDAIREKVVQLMLLDCKRAVSLLIQNKDLIT 613
D +Y A +Y L F I HNL +I++K+V LM D ++AV +L+ N+D I+
Sbjct: 520 YDKNYSSALEIYLTLRHKDAFQLIHKHNLFSSIKDKIVLLMDFDSEKAVDMLLDNEDKIS 579
Query: 614 PSEVVTQLLNARDKCDSRYFLHLYLHALFEVNPHAGKDFHDMQVELYADYDLKMLLPFLR 673
+VV +L D+ + + H+YLH LF + G+ +H+ Q+ LYA+YD LLPFLR
Sbjct: 580 IKKVVEEL---EDRPELQ---HVYLHKLFRRDHRKGQRYHEKQISLYAEYDRPNLLPFLR 633
Query: 674 SSQHYTLEKAYEICVKRDLLREQVFILGRMGNTKHALAVIINKLGDIEEAVEFVNMQHDD 733
S H LEKA EIC +R+ + E V++L RMGN++ AL +I +L D+++A+EF Q D
Sbjct: 634 DSIHCPLEKALEICQQRNFVEETVYLLSRMGNSRSALKMITQELQDVDKAIEFAKEQDDG 693
Query: 734 ELWEELIKQCLNKPEMVGVLLEHTVGNLDPLYIVNMVPNGLEIPRLRDRLVKIITDYRTE 793
ELWE+LI ++KP + LL + ++DP+ +++ + G+EIP LRD LVKI+ DY +
Sbjct: 694 ELWEDLILYSIDKPPFITGLLNNIGTHVDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQ 753
Query: 794 TSLRHGCNDIL 804
LR GC IL
Sbjct: 754 ILLREGCKKIL 764
Score = 607 (218.7 bits), Expect = 4.2e-145, Sum P(2) = 4.2e-145
Identities = 126/328 (38%), Positives = 192/328 (58%)
Query: 37 PRLKYQRMGGSLPSLLANDAASCVAVAERMIALGTHAGTVHILDFLGNQVKEFPAHTAAV 96
P+LKY+R+ + +L DAASC+ V ++ +ALGTH G V++LD GN ++F +
Sbjct: 28 PKLKYERLSNGVTEILQKDAASCMTVHDKFLALGTHYGKVYLLDVQGNITQKFDVSCVKI 87
Query: 97 NDLSFDVDGEYVGSCSDDGSVVINSLFTDEKMKFDYHRPMKAISLDPDYTRKMSRRFVAG 156
N +S D GE++G CS+DG V + L++ E+ + P+K I++ P + R ++FV G
Sbjct: 88 NQISLDESGEHMGVCSEDGKVQVFGLYSGEEFHETFDCPIKIIAVHPHFLRSSCKQFVTG 147
Query: 157 GLAGHLYLNSKKWLG-YRDQVLHSGEGPVHVVKWRTSLIAWANDAGVKVYDAANDQRITF 215
G L L + W+ ++ VLH GEG + VKWR LIAWAN+ GVK++D + QRIT
Sbjct: 148 GKK--LLLFERSWMSRWKSSVLHEGEGNIRSVKWRGHLIAWANNMGVKIFDVTSKQRITN 205
Query: 216 IERPRGSPRPELLLPHLVWQDDTLLVIGWGTYIKIASIKTNQSNVANGTYRHVGMNQVDI 275
+ R S RP++ L W+D L++GWGT +KI S+K + G R + V+I
Sbjct: 206 VPRDDVSLRPDMYPCSLCWKDSVTLIVGWGTSVKICSVKERHA----GEMRDLPSRYVEI 261
Query: 276 VASFQTSYYISGIAPFGDCLVVLAYIPGEEDGEKEFSSTLPSRQGNAQRPEVRIV---TW 332
V+ F+T +YISG+AP D LVVL+Y+ KE S S RP + I+ +
Sbjct: 262 VSQFETEFYISGLAPLWDQLVVLSYV-------KEVSEKTESEY--CARPRLDIIQPLSE 312
Query: 333 NNDELTTDALPVLGFEHYKAKDYSLAHA 360
+E+++DAL V GF+ + +DY L H+
Sbjct: 313 TCEEISSDALTVRGFQENECRDYHLEHS 340
Score = 38 (18.4 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
Identities = 15/46 (32%), Positives = 20/46 (43%)
Query: 437 LIVERKYAEAASLCPKLLRGSASAWERWVFHFAHLRQLPVL-VPYM 481
L+ E E+ L P L +A + VFH H+ L VP M
Sbjct: 784 LVDEENICESC-LSPVLPSDAAKPFSVVVFHCRHMFHKECLPVPSM 828
>MGI|MGI:1929215 [details] [associations]
symbol:Vps41 "vacuolar protein sorting 41 (yeast)"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005769 "early endosome" evidence=IDA]
[GO:0005770 "late endosome" evidence=IDA] [GO:0005798
"Golgi-associated vesicle" evidence=ISO] [GO:0005829 "cytosol"
evidence=ISO] [GO:0005874 "microtubule" evidence=IDA] [GO:0006810
"transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=ISO] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030897 "HOPS complex" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0048193 "Golgi vesicle
transport" evidence=ISO] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR000547 InterPro:IPR011990 InterPro:IPR015943
Pfam:PF00637 PROSITE:PS50089 SMART:SM00184 SMART:SM00299
MGI:MGI:1929215 Prosite:PS00518 GO:GO:0005829 GO:GO:0006886
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0046872 GO:GO:0008270
GO:GO:0005770 Gene3D:1.25.40.10 GO:GO:0005798 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0008017 GO:GO:0030897 GO:GO:0005874
GO:GO:0005769 GO:GO:0048193 eggNOG:NOG285467 OMA:NLIAWAN
InterPro:IPR016902 PIRSF:PIRSF028921 GeneTree:ENSGT00390000000481
CTD:27072 HOVERGEN:HBG056494 OrthoDB:EOG4PRSQ1 EMBL:AB028843
EMBL:AF327407 EMBL:AK051658 EMBL:AK164177 EMBL:BC023243
EMBL:BC049916 EMBL:BC119362 EMBL:BC125299 IPI:IPI00330411
RefSeq:NP_742118.3 UniGene:Mm.27389 ProteinModelPortal:Q5KU39
SMR:Q5KU39 IntAct:Q5KU39 STRING:Q5KU39 PhosphoSite:Q5KU39
PaxDb:Q5KU39 PRIDE:Q5KU39 Ensembl:ENSMUST00000072961 GeneID:218035
KEGG:mmu:218035 UCSC:uc007pok.2 InParanoid:Q05AE9 NextBio:376134
Bgee:Q5KU39 CleanEx:MM_VPS41 Genevestigator:Q5KU39
GermOnline:ENSMUSG00000041236 Uniprot:Q5KU39
Length = 853
Score = 848 (303.6 bits), Expect = 8.8e-145, Sum P(2) = 8.8e-145
Identities = 174/437 (39%), Positives = 266/437 (60%)
Query: 371 QWAAGDEPLYYIVSPKDVVIAKPRDAEDHIAWLLEHGWHEKALAAVEAGQG---RSELLD 427
+++ G E L+Y+VSP+DVV+AK RD +DHI WLLE +E+AL A E Q R ++LD
Sbjct: 337 EYSEG-ESLFYVVSPRDVVVAKERDQDDHIDWLLEKKKYEEALMAAEISQRNIKRHKILD 395
Query: 428 EVGSRYLDHLIVERKYAEAASLCPKLLRGSASAWERWVFHFAHLRQLPVLVPYMPTENPR 487
+G Y++HL+ +Y AA C K+L +AS WE V+ F + QL + PY+P +P
Sbjct: 396 -IGLAYVNHLVERGEYDMAARKCQKILGKNASLWEYEVYKFKEIGQLKAISPYLPRGDPV 454
Query: 488 LRDTAYEVALVALATNPSFHKYLLSTVKSWPPVIYSALPVISAIEPQLNSSSMTDALKEA 547
L+ YE+ L S ++ + ++ WP +Y+ ++ A+ L S L +
Sbjct: 455 LKPLIYEMILHEFLE--SDYEGFATLIREWPGDLYNNSVIVQAVRDHLKKDSQNKTLLKT 512
Query: 548 LAELYVIDGHYEKAFSLYADLMKPYIFDFIENHNLHDAIREKVVQLMLLDCKRAVSLLIQ 607
LAELY D +Y A +Y L +F I HNL +I++K+V LM D ++AV +L+
Sbjct: 513 LAELYTYDKNYGNALEIYLTLRHKDVFQLIHKHNLFSSIKDKIVLLMDFDSEKAVDMLLD 572
Query: 608 NKDLITPSEVVTQLLNARDKCDSRYFLHLYLHALFEVNPHAGKDFHDMQVELYADYDLKM 667
N+D I+ +VV +L D+ + + H+YLH LF+ + H G+ +H+ Q+ LYA+YD
Sbjct: 573 NEDKISIKKVVEEL---EDRPELQ---HVYLHKLFKRDHHKGQRYHEKQISLYAEYDRPN 626
Query: 668 LLPFLRSSQHYTLEKAYEICVKRDLLREQVFILGRMGNTKHALAVIINKLGDIEEAVEFV 727
LLPFLR S H LEKA EIC +R+ + E V++L RMGN++ AL +I+ +L D+++A+EF
Sbjct: 627 LLPFLRDSTHCPLEKALEICQQRNFVEETVYLLSRMGNSRSALKMIMEELHDVDKAIEFA 686
Query: 728 NMQHDDELWEELIKQCLNKPEMVGVLLEHTVGNLDPLYIVNMVPNGLEIPRLRDRLVKII 787
Q D ELWE+LI ++KP + LL + ++DP+ +++ + G+EIP LRD LVKI+
Sbjct: 687 KEQDDGELWEDLILYSIDKPPFITGLLNNIGTHVDPILLIHRIKEGMEIPNLRDSLVKIL 746
Query: 788 TDYRTETSLRHGCNDIL 804
DY + LR GC IL
Sbjct: 747 QDYNLQILLREGCKKIL 763
Score = 588 (212.0 bits), Expect = 8.8e-145, Sum P(2) = 8.8e-145
Identities = 124/326 (38%), Positives = 192/326 (58%)
Query: 37 PRLKYQRMGGSLPSLLANDAASCVAVAERMIALGTHAGTVHILDFLGNQVKEFPAHTAAV 96
P+LKY+R+ + +L DAASC+ V ++ +ALGTH G V++LD GN ++F +
Sbjct: 27 PKLKYERLSNGVTEILQKDAASCMTVHDKFLALGTHYGKVYLLDVQGNITQKFDVSPVKI 86
Query: 97 NDLSFDVDGEYVGSCSDDGSVVINSLFTDEKMKFDYHRPMKAISLDPDYTRKMSRRFVAG 156
N +S D GE++G CS+DG + + L++ E+ + P+K I++ P + R ++FV G
Sbjct: 87 NQISLDDSGEHMGVCSEDGKLQVFGLYSGEEFHETFDCPIKIIAVHPQFVRSSCKQFVTG 146
Query: 157 GLAGHLYLNSKKWLG-YRDQVLHSGEGPVHVVKWRTSLIAWANDAGVKVYDAANDQRITF 215
G L L + W+ ++ VLH GEG + VKWR LIAWAN+ GVKV+D + QRI+
Sbjct: 147 GKK--LLLFERTWMNRWKSSVLHEGEGNIRSVKWRGHLIAWANNMGVKVFDITSKQRISN 204
Query: 216 IERPRGSPRPELLLPHLVWQDDTLLVIGWGTYIKIASIKTNQSNVANGTYRHVGMNQVDI 275
+ R S RP++ L W+D+ L+IGWGT IKI S+K ++ R + V+I
Sbjct: 205 VPRDDISLRPDMYPCSLCWKDNVTLIIGWGTSIKICSVKERHAS----EMRDLPSRYVEI 260
Query: 276 VASFQTSYYISGIAPFGDCLVVLAYIPG-EEDGEKEFSSTLPSRQGNAQRPEVRIVTWNN 334
V+ F+T +YISG+AP D LVVL+Y+ E E+E+ + P PE
Sbjct: 261 VSQFETEFYISGLAPLCDQLVVLSYVKEVSEKTEREYCAR-PRLDIIQPLPETC------ 313
Query: 335 DELTTDALPVLGFEHYKAKDYSLAHA 360
+E+++DAL V GF+ + +DY L ++
Sbjct: 314 EEISSDALTVRGFQENECRDYHLEYS 339
Score = 38 (18.4 bits), Expect = 7.1e-59, Sum P(2) = 7.1e-59
Identities = 16/49 (32%), Positives = 22/49 (44%)
Query: 437 LIVERKYAEAASLCPKLLRGSASAWERWVFHFAHLRQLPVLVPYMPTEN 485
L+ E E+ L P L +A + VFH H+ L P MP+ N
Sbjct: 783 LVDEENICESC-LSPILPTDAAKPFSVVVFHCRHMFHKECL-P-MPSMN 828
>UNIPROTKB|P49754 [details] [associations]
symbol:VPS41 "Vacuolar protein sorting-associated protein
41 homolog" species:9606 "Homo sapiens" [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0005770 "late endosome" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0005798 "Golgi-associated vesicle" evidence=IMP]
[GO:0048193 "Golgi vesicle transport" evidence=IMP] [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0030897 "HOPS complex" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR001841
InterPro:IPR017986 InterPro:IPR000547 InterPro:IPR011990
InterPro:IPR015943 Pfam:PF00637 PROSITE:PS50089 SMART:SM00184
SMART:SM00299 Prosite:PS00518 GO:GO:0005829 GO:GO:0006886
GO:GO:0016020 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0046872 GO:GO:0008270 GO:GO:0005770 Gene3D:1.25.40.10
GO:GO:0005798 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0030897
GO:GO:0005874 GO:GO:0005769 GO:GO:0048193 eggNOG:NOG285467
HOGENOM:HOG000247002 OMA:NLIAWAN InterPro:IPR016902
PIRSF:PIRSF028921 EMBL:U87281 EMBL:U87309 EMBL:AC004850
EMBL:AC005247 EMBL:BC044851 EMBL:L40398 IPI:IPI00028051
IPI:IPI00215972 RefSeq:NP_055211.2 RefSeq:NP_542198.2
UniGene:Hs.592184 ProteinModelPortal:P49754 SMR:P49754
IntAct:P49754 MINT:MINT-1187089 STRING:P49754 PhosphoSite:P49754
DMDM:218512109 PaxDb:P49754 PRIDE:P49754 Ensembl:ENST00000310301
GeneID:27072 KEGG:hsa:27072 UCSC:uc003tgy.3 CTD:27072
GeneCards:GC07M038730 H-InvDB:HIX0006614 HGNC:HGNC:12713
HPA:HPA020080 HPA:HPA020299 MIM:605485 neXtProt:NX_P49754
PharmGKB:PA37328 HOVERGEN:HBG056494 InParanoid:P49754
OrthoDB:EOG4PRSQ1 PhylomeDB:P49754 ChiTaRS:VPS41 GenomeRNAi:27072
NextBio:49663 ArrayExpress:P49754 Bgee:P49754 CleanEx:HS_VPS41
Genevestigator:P49754 GermOnline:ENSG00000006715 Uniprot:P49754
Length = 854
Score = 844 (302.2 bits), Expect = 1.1e-144, Sum P(2) = 1.1e-144
Identities = 174/437 (39%), Positives = 265/437 (60%)
Query: 371 QWAAGDEPLYYIVSPKDVVIAKPRDAEDHIAWLLEHGWHEKALAAVEAGQG---RSELLD 427
+++ G E L+YIVSP+DVV+AK RD +DHI WLLE +E+AL A E Q R ++LD
Sbjct: 338 EYSEG-ESLFYIVSPRDVVVAKERDQDDHIDWLLEKKKYEEALMAAEISQKNIKRHKILD 396
Query: 428 EVGSRYLDHLIVERKYAEAASLCPKLLRGSASAWERWVFHFAHLRQLPVLVPYMPTENPR 487
+G Y++HL+ Y AA C K+L +A+ WE V+ F + QL + PY+P +P
Sbjct: 397 -IGLAYINHLVERGDYDIAARKCQKILGKNAALWEYEVYKFKEIGQLKAISPYLPRGDPV 455
Query: 488 LRDTAYEVALVALATNPSFHKYLLSTVKSWPPVIYSALPVISAIEPQLNSSSMTDALKEA 547
L+ YE+ L S ++ + ++ WP +Y+ ++ A+ L S L +
Sbjct: 456 LKPLIYEMILHEFLE--SDYEGFATLIREWPGDLYNNSVIVQAVRDHLKKDSQNKTLLKT 513
Query: 548 LAELYVIDGHYEKAFSLYADLMKPYIFDFIENHNLHDAIREKVVQLMLLDCKRAVSLLIQ 607
LAELY D +Y A +Y L +F I HNL +I++K+V LM D ++AV +L+
Sbjct: 514 LAELYTYDKNYGNALEIYLTLRHKDVFQLIHKHNLFSSIKDKIVLLMDFDSEKAVDMLLD 573
Query: 608 NKDLITPSEVVTQLLNARDKCDSRYFLHLYLHALFEVNPHAGKDFHDMQVELYADYDLKM 667
N+D I+ +VV +L D+ + + H+YLH LF+ + H G+ +H+ Q+ LYA+YD
Sbjct: 574 NEDKISIKKVVEEL---EDRPELQ---HVYLHKLFKRDHHKGQRYHEKQISLYAEYDRPN 627
Query: 668 LLPFLRSSQHYTLEKAYEICVKRDLLREQVFILGRMGNTKHALAVIINKLGDIEEAVEFV 727
LLPFLR S H LEKA EIC +R+ + E V++L RMGN++ AL +I+ +L D+++A+EF
Sbjct: 628 LLPFLRDSTHCPLEKALEICQQRNFVEETVYLLSRMGNSRSALKMIMEELHDVDKAIEFA 687
Query: 728 NMQHDDELWEELIKQCLNKPEMVGVLLEHTVGNLDPLYIVNMVPNGLEIPRLRDRLVKII 787
Q D ELWE+LI ++KP + LL + ++DP+ +++ + G+EIP LRD LVKI+
Sbjct: 688 KEQDDGELWEDLILYSIDKPPFITGLLNNIGTHVDPILLIHRIKEGMEIPNLRDSLVKIL 747
Query: 788 TDYRTETSLRHGCNDIL 804
DY + LR GC IL
Sbjct: 748 QDYNLQILLREGCKKIL 764
Score = 591 (213.1 bits), Expect = 1.1e-144, Sum P(2) = 1.1e-144
Identities = 123/329 (37%), Positives = 195/329 (59%)
Query: 37 PRLKYQRMGGSLPSLLANDAASCVAVAERMIALGTHAGTVHILDFLGNQVKEFPAHTAAV 96
P+LKY+R+ + +L DAASC+ V ++ +ALGTH G V++LD GN ++F +
Sbjct: 28 PKLKYERLSNGVTEILQKDAASCMTVHDKFLALGTHYGKVYLLDVQGNITQKFDVSPVKI 87
Query: 97 NDLSFDVDGEYVGSCSDDGSVVINSLFTDEKMKFDYHRPMKAISLDPDYTRKMSRRFVAG 156
N +S D GE++G CS+DG V + L++ E+ + P+K I++ P + R ++FV G
Sbjct: 88 NQISLDESGEHMGVCSEDGKVQVFGLYSGEEFHETFDCPIKIIAVHPHFVRSSCKQFVTG 147
Query: 157 GLAGHLYLNSKKWLG-YRDQVLHSGEGPVHVVKWRTSLIAWANDAGVKVYDAANDQRITF 215
G L L + W+ ++ VLH GEG + VKWR LIAWAN+ GVK++D + QRIT
Sbjct: 148 GKK--LLLFERSWMNRWKSAVLHEGEGNIRSVKWRGHLIAWANNMGVKIFDIISKQRITN 205
Query: 216 IERPRGSPRPELLLPHLVWQDDTLLVIGWGTYIKIASIKTNQSNVANGTYRHVGMNQVDI 275
+ R S RP++ L W+D+ L+IGWGT +K+ S+K ++ R + V+I
Sbjct: 206 VPRDDISLRPDMYPCSLCWKDNVTLIIGWGTSVKVCSVKERHAS----EMRDLPSRYVEI 261
Query: 276 VASFQTSYYISGIAPFGDCLVVLAYIPG-EEDGEKEFSSTLPSRQGNAQRPEVRIV---T 331
V+ F+T +YISG+AP D LVVL+Y+ E E+E+ + RP + I+ +
Sbjct: 262 VSQFETEFYISGLAPLCDQLVVLSYVKEISEKTEREYCA----------RPRLDIIQPLS 311
Query: 332 WNNDELTTDALPVLGFEHYKAKDYSLAHA 360
+E+++DAL V GF+ + +DY L ++
Sbjct: 312 ETCEEISSDALTVRGFQENECRDYHLEYS 340
Score = 38 (18.4 bits), Expect = 3.1e-59, Sum P(2) = 3.1e-59
Identities = 16/49 (32%), Positives = 22/49 (44%)
Query: 437 LIVERKYAEAASLCPKLLRGSASAWERWVFHFAHLRQLPVLVPYMPTEN 485
L+ E E+ L P L +A + VFH H+ L P MP+ N
Sbjct: 784 LVDEENICESC-LSPILPSDAAKPFSVVVFHCRHMFHKECL-P-MPSMN 829
>UNIPROTKB|A3KN15 [details] [associations]
symbol:VPS41 "VPS41 protein" species:9913 "Bos taurus"
[GO:0048193 "Golgi vesicle transport" evidence=IEA] [GO:0030897
"HOPS complex" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005798 "Golgi-associated vesicle"
evidence=IEA] [GO:0005770 "late endosome" evidence=IEA] [GO:0005769
"early endosome" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR000547 InterPro:IPR011990 InterPro:IPR015943
Pfam:PF00637 PROSITE:PS50089 SMART:SM00184 SMART:SM00299
GO:GO:0005829 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0046872 GO:GO:0008270 GO:GO:0005770 Gene3D:1.25.40.10
GO:GO:0005798 GO:GO:0030897 GO:GO:0005874 GO:GO:0005769
GO:GO:0048193 eggNOG:NOG285467 HOGENOM:HOG000247002 OMA:NLIAWAN
InterPro:IPR016902 PIRSF:PIRSF028921 GeneTree:ENSGT00390000000481
CTD:27072 HOVERGEN:HBG056494 OrthoDB:EOG4PRSQ1 EMBL:DAAA02011282
EMBL:DAAA02011283 EMBL:DAAA02011284 EMBL:DAAA02011285
EMBL:DAAA02011286 EMBL:DAAA02011287 EMBL:BC133481 IPI:IPI00717798
RefSeq:NP_001076922.1 UniGene:Bt.35232 STRING:A3KN15
Ensembl:ENSBTAT00000009615 GeneID:528654 KEGG:bta:528654
InParanoid:A3KN15 NextBio:20874877 Uniprot:A3KN15
Length = 854
Score = 840 (300.8 bits), Expect = 1.1e-144, Sum P(2) = 1.1e-144
Identities = 173/437 (39%), Positives = 266/437 (60%)
Query: 371 QWAAGDEPLYYIVSPKDVVIAKPRDAEDHIAWLLEHGWHEKALAAVEAGQG---RSELLD 427
+++ G E L+YIVSP+DVV+AK RD +DHI WLLE +E+AL A E Q R ++LD
Sbjct: 338 EYSEG-ESLFYIVSPRDVVVAKERDQDDHIDWLLEKKKYEEALMAAEISQKNIKRHKILD 396
Query: 428 EVGSRYLDHLIVERKYAEAASLCPKLLRGSASAWERWVFHFAHLRQLPVLVPYMPTENPR 487
+G Y++HL+ +Y AA C K+L +A+ WE V+ F + QL + PY+P +P
Sbjct: 397 -IGLAYINHLVARGEYDIAARKCQKILGKNAALWEYEVYKFKEIGQLKAISPYLPRGDPV 455
Query: 488 LRDTAYEVALVALATNPSFHKYLLSTVKSWPPVIYSALPVISAIEPQLNSSSMTDALKEA 547
L+ YE+ L S ++ + ++ WP +Y+ ++ A+ L S L +
Sbjct: 456 LKPLIYEMILHEFLE--SDYEGFATLIREWPGDLYNNSVIVQAVRDHLKKDSQNRTLLKT 513
Query: 548 LAELYVIDGHYEKAFSLYADLMKPYIFDFIENHNLHDAIREKVVQLMLLDCKRAVSLLIQ 607
LAELY D +Y A +Y L +F I HNL +I++K+V LM D ++AV +L+
Sbjct: 514 LAELYTYDKNYGNALEIYLTLRHKDVFQLIHKHNLFSSIKDKIVLLMDFDSEKAVDMLLD 573
Query: 608 NKDLITPSEVVTQLLNARDKCDSRYFLHLYLHALFEVNPHAGKDFHDMQVELYADYDLKM 667
N+D I+ +VV +L D+ + + H+YLH LF+ + H G+ +H+ Q+ LYA++D
Sbjct: 574 NEDKISIKKVVEEL---EDRPELQ---HVYLHKLFKRDHHKGQRYHEKQISLYAEFDRPN 627
Query: 668 LLPFLRSSQHYTLEKAYEICVKRDLLREQVFILGRMGNTKHALAVIINKLGDIEEAVEFV 727
LLPFLR S H LEKA EIC +R+ + E V++L RMGN++ AL +I+ +L D+++A+EF
Sbjct: 628 LLPFLRDSIHCPLEKALEICQQRNFVEETVYLLSRMGNSRSALKMIMEELHDVDKAIEFA 687
Query: 728 NMQHDDELWEELIKQCLNKPEMVGVLLEHTVGNLDPLYIVNMVPNGLEIPRLRDRLVKII 787
Q D ELWE+LI ++KP + LL + ++DP+ +++ + G+EIP LRD LVKI+
Sbjct: 688 KEQDDAELWEDLILYSIDKPPFITGLLNNIGTHVDPILLIHRIKEGMEIPNLRDSLVKIL 747
Query: 788 TDYRTETSLRHGCNDIL 804
DY + LR GC IL
Sbjct: 748 QDYNLQILLREGCKKIL 764
Score = 595 (214.5 bits), Expect = 1.1e-144, Sum P(2) = 1.1e-144
Identities = 124/329 (37%), Positives = 195/329 (59%)
Query: 37 PRLKYQRMGGSLPSLLANDAASCVAVAERMIALGTHAGTVHILDFLGNQVKEFPAHTAAV 96
P+LKY+R+ + +L DAASC+ V ++ +ALGTH G V++LD GN ++F +
Sbjct: 28 PKLKYERLSNGVTEILQKDAASCMTVHDKFLALGTHYGKVYLLDVQGNITQKFDVSPVKI 87
Query: 97 NDLSFDVDGEYVGSCSDDGSVVINSLFTDEKMKFDYHRPMKAISLDPDYTRKMSRRFVAG 156
N +S D GE++G C++DG V + L++ E+ + P+K I++ P + R ++FV G
Sbjct: 88 NQVSLDESGEHMGVCAEDGKVQVFGLYSGEEFHETFDCPIKIIAVHPHFVRSSCKQFVTG 147
Query: 157 GLAGHLYLNSKKWLG-YRDQVLHSGEGPVHVVKWRTSLIAWANDAGVKVYDAANDQRITF 215
G L L + W+ ++ VLH GEG + VKWR LIAWAN+ GVK++D + QRIT
Sbjct: 148 GKK--LLLFERSWMSRWKSSVLHEGEGNIRSVKWRGHLIAWANNMGVKIFDITSKQRITN 205
Query: 216 IERPRGSPRPELLLPHLVWQDDTLLVIGWGTYIKIASIKTNQSNVANGTYRHVGMNQVDI 275
+ R S RP++ L W+D+ L+IGWGT +KI S+K +N R + V+I
Sbjct: 206 VPRDDISLRPDMYPCSLCWKDNVTLIIGWGTSVKICSVKERHAN----EMRDLPSRYVEI 261
Query: 276 VASFQTSYYISGIAPFGDCLVVLAYIPG-EEDGEKEFSSTLPSRQGNAQRPEVRIV---T 331
V+ F+T +YISG+AP D LVVL+Y+ E E+E+ + RP + I+ +
Sbjct: 262 VSQFETEFYISGLAPLCDQLVVLSYVKEVSEKTEREYCA----------RPRLDIIQPLS 311
Query: 332 WNNDELTTDALPVLGFEHYKAKDYSLAHA 360
+E+++DAL V GF+ + +DY L ++
Sbjct: 312 ETCEEISSDALTVRGFQENECRDYHLEYS 340
Score = 40 (19.1 bits), Expect = 5.8e-60, Sum P(2) = 5.8e-60
Identities = 15/58 (25%), Positives = 26/58 (44%)
Query: 425 LLDEVGSRYLDHLIVERKYAEAASLCPKLLRGSASAWERWVFHFAHLRQLPVL-VPYM 481
LL ++ + ++V+ + + L P L +A + VFH H+ L VP M
Sbjct: 771 LLKKMHRTQMKGILVDEENICESCLSPILPSDAAKPFSMVVFHCRHMFHKECLPVPSM 828
>UNIPROTKB|E2R6C3 [details] [associations]
symbol:VPS41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048193 "Golgi vesicle transport"
evidence=IEA] [GO:0030897 "HOPS complex" evidence=IEA] [GO:0008017
"microtubule binding" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005798
"Golgi-associated vesicle" evidence=IEA] [GO:0005770 "late
endosome" evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] InterPro:IPR001841
InterPro:IPR017986 InterPro:IPR000547 InterPro:IPR011990
InterPro:IPR015943 Pfam:PF00637 PROSITE:PS50089 SMART:SM00184
SMART:SM00299 GO:GO:0005829 GO:GO:0006886 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0046872 GO:GO:0008270 GO:GO:0005770
Gene3D:1.25.40.10 GO:GO:0005798 GO:GO:0030897 GO:GO:0005874
GO:GO:0005769 GO:GO:0048193 OMA:NLIAWAN InterPro:IPR016902
PIRSF:PIRSF028921 GeneTree:ENSGT00390000000481 CTD:27072
EMBL:AAEX03011199 RefSeq:XP_533084.2 Ensembl:ENSCAFT00000005763
GeneID:475876 KEGG:cfa:475876 NextBio:20851631 Uniprot:E2R6C3
Length = 854
Score = 838 (300.0 bits), Expect = 6.1e-144, Sum P(2) = 6.1e-144
Identities = 172/437 (39%), Positives = 265/437 (60%)
Query: 371 QWAAGDEPLYYIVSPKDVVIAKPRDAEDHIAWLLEHGWHEKALAAVEAGQG---RSELLD 427
+++ G E L+YIVSP+D+V+AK RD +DHI WLLE +E+AL A E Q R ++LD
Sbjct: 338 EYSEG-ESLFYIVSPRDIVVAKERDQDDHIDWLLEKKKYEEALMAAEISQKNIKRHKILD 396
Query: 428 EVGSRYLDHLIVERKYAEAASLCPKLLRGSASAWERWVFHFAHLRQLPVLVPYMPTENPR 487
+G Y++HL+ + Y AA C K+L + + WE V+ F + QL + PY+P +P
Sbjct: 397 -IGLAYINHLVEKGDYDIAARKCQKILGKNTALWECEVYKFKEIGQLKAISPYLPRGDPI 455
Query: 488 LRDTAYEVALVALATNPSFHKYLLSTVKSWPPVIYSALPVISAIEPQLNSSSMTDALKEA 547
L+ YE+ L S ++ + ++ WP +Y+ ++ A+ L S L +
Sbjct: 456 LKPLIYEMILHEFLE--SDYEGFATLIREWPGDLYNNSVIVQAVRDHLKKDSQNRTLLKT 513
Query: 548 LAELYVIDGHYEKAFSLYADLMKPYIFDFIENHNLHDAIREKVVQLMLLDCKRAVSLLIQ 607
LAELY D +Y A +Y L +F I HNL +I++K+V LM D ++AV +L+
Sbjct: 514 LAELYTYDKNYGNALEIYLTLRHKDVFQLIHKHNLFSSIKDKIVLLMDFDSEKAVDMLLD 573
Query: 608 NKDLITPSEVVTQLLNARDKCDSRYFLHLYLHALFEVNPHAGKDFHDMQVELYADYDLKM 667
N+D I+ +VV +L D+ + + H+YLH LF+ + H G+ +H+ Q+ LYA+YD
Sbjct: 574 NEDKISIKKVVEEL---EDRPELQ---HVYLHKLFKRDHHKGQRYHEKQISLYAEYDRPN 627
Query: 668 LLPFLRSSQHYTLEKAYEICVKRDLLREQVFILGRMGNTKHALAVIINKLGDIEEAVEFV 727
LLPFLR S H LEKA EIC +R+ + E V++L RMGN++ AL +I+ +L D+++A+EF
Sbjct: 628 LLPFLRDSTHCPLEKALEICQQRNFVEETVYLLSRMGNSRSALKMIMEELHDVDKAIEFA 687
Query: 728 NMQHDDELWEELIKQCLNKPEMVGVLLEHTVGNLDPLYIVNMVPNGLEIPRLRDRLVKII 787
Q D ELWE+LI ++KP + LL + ++DP+ +++ + G+EIP LRD LVKI+
Sbjct: 688 KEQDDGELWEDLILYSIDKPPFITGLLNNIGTHVDPILLIHRIKEGMEIPNLRDSLVKIL 747
Query: 788 TDYRTETSLRHGCNDIL 804
DY + LR GC IL
Sbjct: 748 QDYNLQILLREGCKKIL 764
Score = 590 (212.7 bits), Expect = 6.1e-144, Sum P(2) = 6.1e-144
Identities = 123/329 (37%), Positives = 194/329 (58%)
Query: 37 PRLKYQRMGGSLPSLLANDAASCVAVAERMIALGTHAGTVHILDFLGNQVKEFPAHTAAV 96
P+LKY+R+ + +L DAASC+ V ++ +ALGTH G V++LD GN ++F +
Sbjct: 28 PKLKYERLSNGVTEILQKDAASCMTVHDKFLALGTHYGKVYLLDVQGNITQKFDVSPVKI 87
Query: 97 NDLSFDVDGEYVGSCSDDGSVVINSLFTDEKMKFDYHRPMKAISLDPDYTRKMSRRFVAG 156
N +S D GE++G CS+DG V + L++ E+ + P+K I++ P + + ++FV G
Sbjct: 88 NQISLDESGEHMGVCSEDGKVQVFGLYSGEEFHETFDCPIKIIAVHPHFVKSSCKQFVTG 147
Query: 157 GLAGHLYLNSKKWLG-YRDQVLHSGEGPVHVVKWRTSLIAWANDAGVKVYDAANDQRITF 215
G L L + W+ ++ VLH GEG + VKWR LIAWAN+ GVK++D + QRIT
Sbjct: 148 GKK--LLLFERSWMSRWKSSVLHEGEGNIRSVKWRGHLIAWANNMGVKIFDITSKQRITN 205
Query: 216 IERPRGSPRPELLLPHLVWQDDTLLVIGWGTYIKIASIKTNQSNVANGTYRHVGMNQVDI 275
+ R S RP++ L W+D L+IGWGT +KI S+K ++ R + V+I
Sbjct: 206 VPRDDISLRPDMYPCSLCWKDSVTLIIGWGTSVKICSVKERHAS----EMRDLPSRYVEI 261
Query: 276 VASFQTSYYISGIAPFGDCLVVLAYIPG-EEDGEKEFSSTLPSRQGNAQRPEVRIV---T 331
V+ F+T +YISG+AP D LVVL+Y+ E E+E+ + RP + I+ +
Sbjct: 262 VSQFETEFYISGLAPLCDQLVVLSYVKEVSEKTEREYCA----------RPRLDIIQPLS 311
Query: 332 WNNDELTTDALPVLGFEHYKAKDYSLAHA 360
+E+++DAL V GF+ + +DY L ++
Sbjct: 312 ETCEEISSDALTVRGFQENECRDYHLEYS 340
Score = 37 (18.1 bits), Expect = 5.3e-59, Sum P(2) = 5.3e-59
Identities = 15/46 (32%), Positives = 20/46 (43%)
Query: 437 LIVERKYAEAASLCPKLLRGSASAWERWVFHFAHLRQLPVL-VPYM 481
L+ E E+ L P L +A + VFH H+ L VP M
Sbjct: 784 LVDEENICESC-LSPILPSDAAKPFSVVVFHCRHMFHKECLPVPSM 828
>ZFIN|ZDB-GENE-030131-6671 [details] [associations]
symbol:vps41 "vacuolar protein sorting 41 homolog
(S. cerevisiae)" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR017986 InterPro:IPR000547
InterPro:IPR011990 InterPro:IPR015943 Pfam:PF00637 PROSITE:PS50089
SMART:SM00184 SMART:SM00299 ZFIN:ZDB-GENE-030131-6671 GO:GO:0006886
GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:1.25.40.10 InterPro:IPR019453
Pfam:PF10367 InterPro:IPR016902 PIRSF:PIRSF028921
GeneTree:ENSGT00390000000481 EMBL:BX571823 EMBL:BX571690
IPI:IPI00993319 Ensembl:ENSDART00000143390 ArrayExpress:E9QF68
Bgee:E9QF68 Uniprot:E9QF68
Length = 855
Score = 815 (292.0 bits), Expect = 1.1e-142, Sum P(2) = 1.1e-142
Identities = 167/432 (38%), Positives = 257/432 (59%)
Query: 377 EPLYYIVSPKDVVIAKPRDAEDHIAWLLEHG-WHEKALAAVEAGQGRSELLD--EVGSRY 433
E L+YI+SPKD+V+AK RD +DHI WLLE + E+AL A E + D ++G Y
Sbjct: 343 ESLFYIISPKDIVVAKERDQDDHIDWLLEKKKYEEEALMAAEISFKNIKRHDVQKIGMAY 402
Query: 434 LDHLIVERKYAEAASLCPKLLRGSASAWERWVFHFAHLRQLPVLVPYMPTENPRLRDTAY 493
++HL+ + Y AA C K+L + WE V+ F + QL + Y+P + RLR Y
Sbjct: 403 INHLVEKGDYDTAARKCQKVLGKNMDLWENEVYRFKTIGQLKAISQYLPRGDLRLRPAIY 462
Query: 494 EVALVA-LATNPSFHKYLLSTVKSWPPVIYSALPVISAIEPQLNSSSMTDALKEALAELY 552
E+ L L T+ ++ + ++ WP +Y+ + ++ A+ L L LAELY
Sbjct: 463 EMILHDFLKTD---YEGFATLIREWPGELYNNMAIVQAVNEHLKKDPTNSILLTTLAELY 519
Query: 553 VIDGHYEKAFSLYADLMKPYIFDFIENHNLHDAIREKVVQLMLLDCKRAVSLLIQNKDLI 612
D Y++A +Y L ++ I HNL +I++K+V LM D ++AV +L+ N+D I
Sbjct: 520 TYDQRYDRALEIYLRLRHKDVYQLIHKHNLFSSIKDKIVLLMDFDKEKAVDMLLDNEDKI 579
Query: 613 TPSEVVTQLLNARDKCDSRYFLHLYLHALFEVNPHAGKDFHDMQVELYADYDLKMLLPFL 672
+ +VV +L +D+ + LH+YLH LF+ + H G+ +H+ Q+ LYA++D LLPFL
Sbjct: 580 SMDKVVEEL---KDRPE---LLHVYLHKLFKRDHHKGQKYHERQISLYAEFDRPNLLPFL 633
Query: 673 RSSQHYTLEKAYEICVKRDLLREQVFILGRMGNTKHALAVIINKLGDIEEAVEFVNMQHD 732
R S H LEKA EIC +R + E VF+L RMGN + AL +I+ +L ++++A+EF Q D
Sbjct: 634 RESMHCPLEKALEICQQRHFVEETVFLLSRMGNCRRALQMIMEELANVDKAIEFAKEQDD 693
Query: 733 DELWEELIKQCLNKPEMVGVLLEHTVGNLDPLYIVNMVPNGLEIPRLRDRLVKIITDYRT 792
ELWE+LI ++KP + LL + ++DP+ +++ + G+EIP LRD LVKI+ DY
Sbjct: 694 RELWEDLISYSIDKPPFITGLLNNIGTHVDPILLIHRIKEGMEIPNLRDSLVKILHDYNL 753
Query: 793 ETSLRHGCNDIL 804
+ LR GC IL
Sbjct: 754 QILLREGCKKIL 765
Score = 601 (216.6 bits), Expect = 1.1e-142, Sum P(2) = 1.1e-142
Identities = 123/325 (37%), Positives = 189/325 (58%)
Query: 37 PRLKYQRMGGSLPSLLANDAASCVAVAERMIALGTHAGTVHILDFLGNQVKEFPAHTAAV 96
P+LKY+R+ + +L DAASC+ V ++ +ALGTH G V +LD GN ++F + +
Sbjct: 28 PKLKYERLTNGVTEILQKDAASCMTVHDKFLALGTHFGKVFLLDIQGNVTQKFEISSVKI 87
Query: 97 NDLSFDVDGEYVGSCSDDGSVVINSLFTDEKMKFDYHRPMKAISLDPDYTRKMSRRFVAG 156
N +S D G++VG CS+DG V + L+T E ++ P+K ++L P +++ +++FV G
Sbjct: 88 NQISLDESGDHVGICSEDGKVQVFGLYTREGFHENFDCPIKVVALHPQFSKSNNKQFVTG 147
Query: 157 GLAGHLYLNSKKWLG-YRDQVLHSGEGPVHVVKWRTSLIAWANDAGVKVYDAANDQRITF 215
G L L + WL ++ VLH GEG + VKWR +LIAWAN+ GVK+YD + QRIT
Sbjct: 148 G--NKLLLYERNWLNRWKTSVLHEGEGNITSVKWRGNLIAWANNVGVKIYDIGSKQRITN 205
Query: 216 IERPRGSPRPELLLPHLVWQDDTLLVIGWGTYIKIASIKTNQSNVANGTYRHVGMNQVDI 275
+ R S RP++ L W+D+T L+IGWG +KI ++K R + V+I
Sbjct: 206 VLRDNTSLRPDMYPCSLCWKDNTTLIIGWGCSVKICAVKERDPT----EMRDLPSRYVEI 261
Query: 276 VASFQTSYYISGIAPFGDCLVVLAYIPGEEDGEKEFSSTLPSRQGNAQRPEVRIVTWNND 335
V++F+T ++ISG+AP D LV L Y+ D +E T P PE +
Sbjct: 262 VSAFETEFFISGLAPLADQLVTLYYVKENSDHMEEEFRTRPRLDIIQPLPE------GCE 315
Query: 336 ELTTDALPVLGFEHYKAKDYSLAHA 360
E+++DAL V F+ + +DY L H+
Sbjct: 316 EISSDALTVRNFQENQCRDYRLEHS 340
Score = 40 (19.1 bits), Expect = 9.9e-61, Sum P(2) = 9.9e-61
Identities = 11/33 (33%), Positives = 14/33 (42%)
Query: 490 DTAYEVALVALATNPSFHKYLLSTVKSWPPVIY 522
DTA +V FHK L + S P + Y
Sbjct: 803 DTAQAFGVVVFHCRHMFHKECLPSPGSIPGIQY 835
>UNIPROTKB|F1NMR8 [details] [associations]
symbol:VPS41 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005769 "early
endosome" evidence=IEA] [GO:0005770 "late endosome" evidence=IEA]
[GO:0005798 "Golgi-associated vesicle" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0030897 "HOPS
complex" evidence=IEA] [GO:0048193 "Golgi vesicle transport"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR000547 InterPro:IPR011990 InterPro:IPR015943
Pfam:PF00637 PROSITE:PS50089 SMART:SM00184 SMART:SM00299
GO:GO:0005829 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0046872 GO:GO:0008270 GO:GO:0005770 Gene3D:1.25.40.10
GO:GO:0005798 GO:GO:0030897 GO:GO:0005874 GO:GO:0005769
GO:GO:0048193 OMA:NLIAWAN InterPro:IPR016902 PIRSF:PIRSF028921
GeneTree:ENSGT00390000000481 EMBL:AADN02001408 EMBL:AADN02001409
EMBL:AADN02001410 EMBL:AADN02001411 IPI:IPI00820885
Ensembl:ENSGALT00000037446 Uniprot:F1NMR8
Length = 854
Score = 821 (294.1 bits), Expect = 6.3e-140, Sum P(2) = 6.3e-140
Identities = 169/437 (38%), Positives = 259/437 (59%)
Query: 371 QWAAGDEPLYYIVSPKDVVIAKPRDAEDHIAWLLEHGWHEKALAAVEAGQG---RSELLD 427
+++ G E L+YI+SP+DVV+AK RD +DHI WLLE +E+AL A E Q + ++LD
Sbjct: 338 EYSEG-ESLFYIISPRDVVVAKERDQDDHIDWLLEKKKYEEALMAAEISQKTIKKHKILD 396
Query: 428 EVGSRYLDHLIVERKYAEAASLCPKLLRGSASAWERWVFHFAHLRQLPVLVPYMPTENPR 487
+G Y++HL+ + ++ AA C K+L + WE V+ F + QL + Y+P +P
Sbjct: 397 -IGLAYINHLVEKGEHDLAARKCQKILGKNTELWEFEVYKFKEIGQLKAISRYLPRRDPV 455
Query: 488 LRDTAYEVALVALATNPSFHKYLLSTVKSWPPVIYSALPVISAIEPQLNSSSMTDALKEA 547
L+ YE+ L S ++ + +K WP +Y+ ++ A+ L L
Sbjct: 456 LKPLIYEMVLHEFLE--SDYEGFATLIKEWPGDLYNNTIIVQAVVDHLKKDPQNRTLLRT 513
Query: 548 LAELYVIDGHYEKAFSLYADLMKPYIFDFIENHNLHDAIREKVVQLMLLDCKRAVSLLIQ 607
LAELY D Y +A +Y L +F I HNL +I++K+V LM D ++AV +L+
Sbjct: 514 LAELYTYDQRYGRALEIYLTLRHKDVFQLIHRHNLFSSIKDKIVLLMDFDSEKAVDMLLD 573
Query: 608 NKDLITPSEVVTQLLNARDKCDSRYFLHLYLHALFEVNPHAGKDFHDMQVELYADYDLKM 667
N+D I+ VV +L N + H+YLH LF+ + H G+ +H+ Q+ LYA+YD
Sbjct: 574 NEDKISIDRVVEELENRPE------LQHVYLHKLFKRDHHKGQRYHEKQISLYAEYDRPN 627
Query: 668 LLPFLRSSQHYTLEKAYEICVKRDLLREQVFILGRMGNTKHALAVIINKLGDIEEAVEFV 727
LLPFLR S H LEKA EIC +R+ + E V++L RMGN++ AL +I+ +L D+++A+EF
Sbjct: 628 LLPFLRDSTHCPLEKALEICQQRNFVEETVYLLSRMGNSRSALKMIMEELQDVDKAIEFA 687
Query: 728 NMQHDDELWEELIKQCLNKPEMVGVLLEHTVGNLDPLYIVNMVPNGLEIPRLRDRLVKII 787
Q D ELWE+LI ++KP + LL + ++DP+ +++ + G+EIP LRD LVKI+
Sbjct: 688 KEQDDGELWEDLILYSIDKPPFITGLLNNIGTHVDPILLIHRIKEGMEIPNLRDSLVKIL 747
Query: 788 TDYRTETSLRHGCNDIL 804
DY + LR GC IL
Sbjct: 748 QDYNLQILLREGCKKIL 764
Score = 569 (205.4 bits), Expect = 6.3e-140, Sum P(2) = 6.3e-140
Identities = 124/327 (37%), Positives = 189/327 (57%)
Query: 37 PRLKYQRMGGSLPSLLANDAASCVAVAERMIALGTHAGTVHILDFLGNQVKEFPAHTAAV 96
P+LKY+R+ + +L DAASC+ V E+ +ALGTH G V++LD GN ++F +
Sbjct: 28 PKLKYERLSNGVTEILQKDAASCMTVHEKFLALGTHYGKVYLLDVQGNITQKFDVSPVKI 87
Query: 97 NDLSFDVDGEYVGSCSDDGSVVINSLFTDEKMKFDYHRPMKAISLDPDYTRKMSRRFVAG 156
N +S D GE++G CS+DG V + L++ E+ + P+K +++ P + R ++FV G
Sbjct: 88 NQISLDESGEHMGVCSEDGKVQVFGLYSAEEFHETFDCPIKIVAVHPHFVRSHFKQFVTG 147
Query: 157 GLAGHLYLNSKKWLG-YRDQVLHSGEGPVHVVKWRTSLIAWANDAGVKVYDAANDQRITF 215
G L L + W+ ++ VLH GEG + VKWR LIAWAN+ GVK+ D + QRIT
Sbjct: 148 GKK--LLLYERGWMNRWKPSVLHEGEGNIRNVKWRGHLIAWANNMGVKILDMISKQRITN 205
Query: 216 IERPRGSPRPELLLPHLVWQDDTLLVIGWGTYIKIASIKTNQSNVANGTYRHVGMNQVDI 275
+ R S RP++ L W+D+ L+IGWG +KI S+K ++ R + V+I
Sbjct: 206 VPRDDISLRPDMYPCSLCWKDNLTLIIGWGNSVKICSVKERHAS----EMRDLPNRYVEI 261
Query: 276 VASFQTSYYISGIAPFGDCLVVLAYIPGEEDGEK-EFSSTLPSRQGNAQR-PEVRIVTWN 333
V F T +YISG+AP D LV+L+Y+ +E EK E R Q PE +
Sbjct: 262 VFQFDTEFYISGLAPLCDQLVILSYV--KEISEKTEVECCARPRLDIVQPLPE------S 313
Query: 334 NDELTTDALPVLGFEHYKAKDYSLAHA 360
+E+++DAL V GF+ + +DY L ++
Sbjct: 314 CEEISSDALTVRGFQENECRDYHLEYS 340
>UNIPROTKB|E9PF36 [details] [associations]
symbol:VPS41 "Vacuolar protein sorting-associated protein
41 homolog" species:9606 "Homo sapiens" [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR000547 InterPro:IPR011990 Pfam:PF00637 PROSITE:PS50089
SMART:SM00184 SMART:SM00299 GO:GO:0006886 GO:GO:0016192
SUPFAM:SSF50978 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:1.25.40.10 Gene3D:3.30.40.10 InterPro:IPR013083
EMBL:AC011292 InterPro:IPR016902 PIRSF:PIRSF028921 EMBL:AC004850
EMBL:AC005247 RefSeq:NP_542198.2 UniGene:Hs.592184 GeneID:27072
KEGG:hsa:27072 CTD:27072 HGNC:HGNC:12713 ChiTaRS:VPS41
GenomeRNAi:27072 NextBio:49663 IPI:IPI00081851
ProteinModelPortal:E9PF36 SMR:E9PF36 PRIDE:E9PF36
Ensembl:ENST00000395969 UCSC:uc003tgz.3 ArrayExpress:E9PF36
Bgee:E9PF36 Uniprot:E9PF36
Length = 829
Score = 844 (302.2 bits), Expect = 9.2e-137, Sum P(3) = 9.2e-137
Identities = 174/437 (39%), Positives = 265/437 (60%)
Query: 371 QWAAGDEPLYYIVSPKDVVIAKPRDAEDHIAWLLEHGWHEKALAAVEAGQG---RSELLD 427
+++ G E L+YIVSP+DVV+AK RD +DHI WLLE +E+AL A E Q R ++LD
Sbjct: 313 EYSEG-ESLFYIVSPRDVVVAKERDQDDHIDWLLEKKKYEEALMAAEISQKNIKRHKILD 371
Query: 428 EVGSRYLDHLIVERKYAEAASLCPKLLRGSASAWERWVFHFAHLRQLPVLVPYMPTENPR 487
+G Y++HL+ Y AA C K+L +A+ WE V+ F + QL + PY+P +P
Sbjct: 372 -IGLAYINHLVERGDYDIAARKCQKILGKNAALWEYEVYKFKEIGQLKAISPYLPRGDPV 430
Query: 488 LRDTAYEVALVALATNPSFHKYLLSTVKSWPPVIYSALPVISAIEPQLNSSSMTDALKEA 547
L+ YE+ L S ++ + ++ WP +Y+ ++ A+ L S L +
Sbjct: 431 LKPLIYEMILHEFLE--SDYEGFATLIREWPGDLYNNSVIVQAVRDHLKKDSQNKTLLKT 488
Query: 548 LAELYVIDGHYEKAFSLYADLMKPYIFDFIENHNLHDAIREKVVQLMLLDCKRAVSLLIQ 607
LAELY D +Y A +Y L +F I HNL +I++K+V LM D ++AV +L+
Sbjct: 489 LAELYTYDKNYGNALEIYLTLRHKDVFQLIHKHNLFSSIKDKIVLLMDFDSEKAVDMLLD 548
Query: 608 NKDLITPSEVVTQLLNARDKCDSRYFLHLYLHALFEVNPHAGKDFHDMQVELYADYDLKM 667
N+D I+ +VV +L D+ + + H+YLH LF+ + H G+ +H+ Q+ LYA+YD
Sbjct: 549 NEDKISIKKVVEEL---EDRPELQ---HVYLHKLFKRDHHKGQRYHEKQISLYAEYDRPN 602
Query: 668 LLPFLRSSQHYTLEKAYEICVKRDLLREQVFILGRMGNTKHALAVIINKLGDIEEAVEFV 727
LLPFLR S H LEKA EIC +R+ + E V++L RMGN++ AL +I+ +L D+++A+EF
Sbjct: 603 LLPFLRDSTHCPLEKALEICQQRNFVEETVYLLSRMGNSRSALKMIMEELHDVDKAIEFA 662
Query: 728 NMQHDDELWEELIKQCLNKPEMVGVLLEHTVGNLDPLYIVNMVPNGLEIPRLRDRLVKII 787
Q D ELWE+LI ++KP + LL + ++DP+ +++ + G+EIP LRD LVKI+
Sbjct: 663 KEQDDGELWEDLILYSIDKPPFITGLLNNIGTHVDPILLIHRIKEGMEIPNLRDSLVKIL 722
Query: 788 TDYRTETSLRHGCNDIL 804
DY + LR GC IL
Sbjct: 723 QDYNLQILLREGCKKIL 739
Score = 394 (143.8 bits), Expect = 9.2e-137, Sum P(3) = 9.2e-137
Identities = 89/249 (35%), Positives = 143/249 (57%)
Query: 117 VVINSLFTDEKMKFDYHRPMKAISLDPDYTRKMSRRFVAGGLAGHLYLNSKKWLG-YRDQ 175
V + L++ E+ + P+K I++ P + R ++FV GG L L + W+ ++
Sbjct: 83 VQVFGLYSGEEFHETFDCPIKIIAVHPHFVRSSCKQFVTGGKK--LLLFERSWMNRWKSA 140
Query: 176 VLHSGEGPVHVVKWRTSLIAWANDAGVKVYDAANDQRITFIERPRGSPRPELLLPHLVWQ 235
VLH GEG + VKWR LIAWAN+ GVK++D + QRIT + R S RP++ L W+
Sbjct: 141 VLHEGEGNIRSVKWRGHLIAWANNMGVKIFDIISKQRITNVPRDDISLRPDMYPCSLCWK 200
Query: 236 DDTLLVIGWGTYIKIASIKTNQSNVANGTYRHVGMNQVDIVASFQTSYYISGIAPFGDCL 295
D+ L+IGWGT +K+ S+K ++ R + V+IV+ F+T +YISG+AP D L
Sbjct: 201 DNVTLIIGWGTSVKVCSVKERHAS----EMRDLPSRYVEIVSQFETEFYISGLAPLCDQL 256
Query: 296 VVLAYIPG-EEDGEKEFSSTLPSRQGNAQRPEVRIV---TWNNDELTTDALPVLGFEHYK 351
VVL+Y+ E E+E+ + RP + I+ + +E+++DAL V GF+ +
Sbjct: 257 VVLSYVKEISEKTEREYCA----------RPRLDIIQPLSETCEEISSDALTVRGFQENE 306
Query: 352 AKDYSLAHA 360
+DY L ++
Sbjct: 307 CRDYHLEYS 315
Score = 137 (53.3 bits), Expect = 9.2e-137, Sum P(3) = 9.2e-137
Identities = 24/53 (45%), Positives = 37/53 (69%)
Query: 37 PRLKYQRMGGSLPSLLANDAASCVAVAERMIALGTHAGTVHILDFLGNQVKEF 89
P+LKY+R+ + +L DAASC+ V ++ +ALGTH G V++LD GN ++F
Sbjct: 28 PKLKYERLSNGVTEILQKDAASCMTVHDKFLALGTHYGKVYLLDVQGNITQKF 80
Score = 38 (18.4 bits), Expect = 2.9e-42, Sum P(3) = 2.9e-42
Identities = 16/49 (32%), Positives = 22/49 (44%)
Query: 437 LIVERKYAEAASLCPKLLRGSASAWERWVFHFAHLRQLPVLVPYMPTEN 485
L+ E E+ L P L +A + VFH H+ L P MP+ N
Sbjct: 759 LVDEENICESC-LSPILPSDAAKPFSVVVFHCRHMFHKECL-P-MPSMN 804
>UNIPROTKB|Q5ZL70 [details] [associations]
symbol:VPS41 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005769 "early
endosome" evidence=IEA] [GO:0005770 "late endosome" evidence=IEA]
[GO:0005798 "Golgi-associated vesicle" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0008017 "microtubule binding" evidence=IEA] [GO:0030897 "HOPS
complex" evidence=IEA] [GO:0048193 "Golgi vesicle transport"
evidence=IEA] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR000547 InterPro:IPR011990 InterPro:IPR015943
Pfam:PF00637 PROSITE:PS50089 SMART:SM00184 SMART:SM00299
GO:GO:0005829 GO:GO:0006886 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0046872 GO:GO:0008270 GO:GO:0005770 Gene3D:1.25.40.10
GO:GO:0005798 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0030897
GO:GO:0005874 GO:GO:0005769 GO:GO:0048193 eggNOG:NOG285467
HOGENOM:HOG000247002 InterPro:IPR016902 PIRSF:PIRSF028921
GeneTree:ENSGT00390000000481 CTD:27072 HOVERGEN:HBG056494
OrthoDB:EOG4PRSQ1 EMBL:AADN02001408 EMBL:AADN02001409
EMBL:AADN02001410 EMBL:AADN02001411 EMBL:AJ719864 IPI:IPI00590917
RefSeq:NP_001012877.1 UniGene:Gga.1439 STRING:Q5ZL70
Ensembl:ENSGALT00000020102 GeneID:420762 KEGG:gga:420762
InParanoid:Q5ZL70 NextBio:20823632 Uniprot:Q5ZL70
Length = 804
Score = 821 (294.1 bits), Expect = 6.0e-133, Sum P(2) = 6.0e-133
Identities = 169/437 (38%), Positives = 259/437 (59%)
Query: 371 QWAAGDEPLYYIVSPKDVVIAKPRDAEDHIAWLLEHGWHEKALAAVEAGQG---RSELLD 427
+++ G E L+YI+SP+DVV+AK RD +DHI WLLE +E+AL A E Q + ++LD
Sbjct: 288 EYSEG-ESLFYIISPRDVVVAKERDQDDHIDWLLEKKKYEEALMAAEISQKTIKKHKILD 346
Query: 428 EVGSRYLDHLIVERKYAEAASLCPKLLRGSASAWERWVFHFAHLRQLPVLVPYMPTENPR 487
+G Y++HL+ + ++ AA C K+L + WE V+ F + QL + Y+P +P
Sbjct: 347 -IGLAYINHLVEKGEHDLAARKCQKILGKNTELWEFEVYKFKEIGQLKAISRYLPRRDPV 405
Query: 488 LRDTAYEVALVALATNPSFHKYLLSTVKSWPPVIYSALPVISAIEPQLNSSSMTDALKEA 547
L+ YE+ L S ++ + +K WP +Y+ ++ A+ L L
Sbjct: 406 LKPLIYEMVLHEFLE--SDYEGFATLIKEWPGDLYNNTIIVQAVVDHLKKDPQNRTLLRT 463
Query: 548 LAELYVIDGHYEKAFSLYADLMKPYIFDFIENHNLHDAIREKVVQLMLLDCKRAVSLLIQ 607
LAELY D Y +A +Y L +F I HNL +I++K+V LM D ++AV +L+
Sbjct: 464 LAELYTYDQRYGRALEIYLTLRHKDVFQLIHRHNLFSSIKDKIVLLMDFDSEKAVDMLLD 523
Query: 608 NKDLITPSEVVTQLLNARDKCDSRYFLHLYLHALFEVNPHAGKDFHDMQVELYADYDLKM 667
N+D I+ VV +L N + H+YLH LF+ + H G+ +H+ Q+ LYA+YD
Sbjct: 524 NEDKISIDRVVEELENRPE------LQHVYLHKLFKRDHHKGQRYHEKQISLYAEYDRPN 577
Query: 668 LLPFLRSSQHYTLEKAYEICVKRDLLREQVFILGRMGNTKHALAVIINKLGDIEEAVEFV 727
LLPFLR S H LEKA EIC +R+ + E V++L RMGN++ AL +I+ +L D+++A+EF
Sbjct: 578 LLPFLRDSTHCPLEKALEICQQRNFVEETVYLLSRMGNSRSALKMIMEELQDVDKAIEFA 637
Query: 728 NMQHDDELWEELIKQCLNKPEMVGVLLEHTVGNLDPLYIVNMVPNGLEIPRLRDRLVKII 787
Q D ELWE+LI ++KP + LL + ++DP+ +++ + G+EIP LRD LVKI+
Sbjct: 638 KEQDDGELWEDLILYSIDKPPFITGLLNNIGTHVDPILLIHRIKEGMEIPNLRDSLVKIL 697
Query: 788 TDYRTETSLRHGCNDIL 804
DY + LR GC IL
Sbjct: 698 QDYNLQILLREGCKKIL 714
Score = 503 (182.1 bits), Expect = 6.0e-133, Sum P(2) = 6.0e-133
Identities = 113/304 (37%), Positives = 173/304 (56%)
Query: 60 VAVAERMIALGTHAGTVHILDFLGNQVKEFPAHTAAVNDLSFDVDGEYVGSCSDDGSVVI 119
+ V E+ +ALGTH G V++LD GN ++F +N +S D GE++G CS+DG V +
Sbjct: 1 MTVHEKFLALGTHYGKVYLLDVQGNITQKFDVSPVKINQISLDESGEHMGVCSEDGKVQV 60
Query: 120 NSLFTDEKMKFDYHRPMKAISLDPDYTRKMSRRFVAGGLAGHLYLNSKKWLG-YRDQVLH 178
L++ E+ + P+K +++ P + R ++FV GG L L + W+ ++ VLH
Sbjct: 61 FGLYSAEEFHETFDCPIKIVAVHPHFVRSHFKQFVTGGKK--LLLYERGWMNRWKPSVLH 118
Query: 179 SGEGPVHVVKWRTSLIAWANDAGVKVYDAANDQRITFIERPRGSPRPELLLPHLVWQDDT 238
GEG + VKWR LIAWAN+ GVK+ D + QRIT + R S RP++ L W+D+
Sbjct: 119 EGEGNIRNVKWRGHLIAWANNMGVKILDMISKQRITNVPRDDISLRPDMYPCSLCWKDNL 178
Query: 239 LLVIGWGTYIKIASIKTNQSNVANGTYRHVGMNQVDIVASFQTSYYISGIAPFGDCLVVL 298
L+IGWG +KI S+K ++ R + V+IV F T +YISG+AP D LV+L
Sbjct: 179 TLIIGWGNSVKICSVKERHAS----EMRDLPNRYVEIVFQFDTEFYISGLAPLCDQLVIL 234
Query: 299 AYIPGEEDGEK-EFSSTLPSRQGNAQR-PEVRIVTWNNDELTTDALPVLGFEHYKAKDYS 356
+Y+ +E EK E R Q PE + +E+++DAL V GF+ + +DY
Sbjct: 235 SYV--KEISEKTEVECCARPRLDIVQPLPE------SCEEISSDALTVRGFQENECRDYH 286
Query: 357 LAHA 360
L ++
Sbjct: 287 LEYS 290
>RGD|1560511 [details] [associations]
symbol:Vps41 "vacuolar protein sorting 41 homolog (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005769 "early endosome" evidence=ISO]
[GO:0005770 "late endosome" evidence=ISO] [GO:0005798
"Golgi-associated vesicle" evidence=ISO] [GO:0005829 "cytosol"
evidence=ISO] [GO:0005874 "microtubule" evidence=ISO] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0008017
"microtubule binding" evidence=ISO] [GO:0016020 "membrane"
evidence=ISO] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0030897 "HOPS complex" evidence=ISO] [GO:0048193
"Golgi vesicle transport" evidence=ISO] InterPro:IPR017986
InterPro:IPR000547 InterPro:IPR011990 InterPro:IPR015943
Pfam:PF00637 SMART:SM00299 RGD:1560511 GO:GO:0006886 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005622 Gene3D:1.25.40.10
InterPro:IPR016902 PIRSF:PIRSF028921 GeneTree:ENSGT00390000000481
IPI:IPI00870348 PRIDE:D3ZVH6 Ensembl:ENSRNOT00000067636
UCSC:RGD:1560511 ArrayExpress:D3ZVH6 Uniprot:D3ZVH6
Length = 719
Score = 727 (261.0 bits), Expect = 5.3e-132, Sum P(2) = 5.3e-132
Identities = 152/389 (39%), Positives = 234/389 (60%)
Query: 371 QWAAGDEPLYYIVSPKDVVIAKPRDAEDHIAWLLEHGWHEKALAAVEAGQG---RSELLD 427
+++ G E L+Y+VSP+DVV+AK RD +DHI WLLE +E+AL A E R ++L
Sbjct: 337 EYSEG-ESLFYVVSPRDVVVAKERDQDDHIDWLLEKKKYEEALMAAEISHRNIKRHKIL- 394
Query: 428 EVGSRYLDHLIVERKYAEAASLCPKLLRGSASAWERWVFHFAHLRQLPVLVPYMPTENPR 487
E+G Y++HL+ +Y AA C K+L +AS WE V+ F + QL + PY+P +P
Sbjct: 395 EIGLAYVNHLVERGEYDMAARKCQKILGKNASLWEYEVYKFKEIGQLKAISPYLPRGDPV 454
Query: 488 LRDTAYEVALVALATNPSFHKYLLSTVKSWPPVIYSALPVISAIEPQLNSSSMTDALKEA 547
L+ YE+ L S ++ + ++ WP +Y+ ++ A+ L S L +
Sbjct: 455 LKPLIYEMILHEFLE--SDYEGFATLIREWPGDLYNNSVIVQAVRDHLKKDSQNKTLLKT 512
Query: 548 LAELYVIDGHYEKAFSLYADLMKPYIFDFIENHNLHDAIREKVVQLMLLDCKRAVSLLIQ 607
LAELY D +Y A +Y L +F I HNL +I++K+V LM D ++AV +L+
Sbjct: 513 LAELYTYDKNYGNALEIYLTLRHKDVFQLIHKHNLFSSIKDKIVLLMDFDSEKAVDMLLD 572
Query: 608 NKDLITPSEVVTQLLNARDKCDSRYFLHLYLHALFEVNPHAGKDFHDMQVELYADYDLKM 667
N+D I+ +VV +L D+ + + H+YLH LF+ + H G+ +H+ Q+ LYA+YD
Sbjct: 573 NEDKISIKKVVEEL---EDRPELQ---HVYLHKLFKRDHHKGQRYHEKQISLYAEYDRPN 626
Query: 668 LLPFLRSSQHYTLEKAYEICVKRDLLREQVFILGRMGNTKHALAVIINKLGDIEEAVEFV 727
LLPFLR S H LEKA EIC +R+ + E V++L RMGN++ AL +I+ +L D+++A+EF
Sbjct: 627 LLPFLRDSTHCPLEKALEICQQRNFVEETVYLLSRMGNSRSALKMIMEELHDVDKAIEFA 686
Query: 728 NMQHDDELWEELIKQCLNKPEMVGVLLEH 756
Q D ELWE+LI ++KP + LL +
Sbjct: 687 KEQDDGELWEDLILYSIDKPPFITGLLNN 715
Score = 588 (212.0 bits), Expect = 5.3e-132, Sum P(2) = 5.3e-132
Identities = 123/326 (37%), Positives = 191/326 (58%)
Query: 37 PRLKYQRMGGSLPSLLANDAASCVAVAERMIALGTHAGTVHILDFLGNQVKEFPAHTAAV 96
P+LKY+R+ + +L DAASC+ V ++ +ALGTH G V++LD GN ++F +
Sbjct: 27 PKLKYERLSNGVTEILQKDAASCMTVHDKFLALGTHYGKVYLLDVQGNITQKFDVSPVKI 86
Query: 97 NDLSFDVDGEYVGSCSDDGSVVINSLFTDEKMKFDYHRPMKAISLDPDYTRKMSRRFVAG 156
N +S D GE++G CS+DG + + L++ E+ + P+K +++ P + R ++FV G
Sbjct: 87 NQISLDESGEHMGVCSEDGKLQVFGLYSGEEFHETFDCPIKIVAVHPQFVRSSCKQFVTG 146
Query: 157 GLAGHLYLNSKKWLG-YRDQVLHSGEGPVHVVKWRTSLIAWANDAGVKVYDAANDQRITF 215
G L L + W+ ++ VLH GEG + VKWR LIAWAN+ GVK++D + QRIT
Sbjct: 147 GKK--LLLFERTWMNRWKSSVLHEGEGNIRSVKWRGHLIAWANNMGVKIFDITSKQRITN 204
Query: 216 IERPRGSPRPELLLPHLVWQDDTLLVIGWGTYIKIASIKTNQSNVANGTYRHVGMNQVDI 275
+ R S RP++ L W+D L+IGWGT IKI S+K ++ R + V+I
Sbjct: 205 VPRDDISLRPDMYPCSLCWKDAVTLIIGWGTSIKICSVKERHAS----EMRDLPSRYVEI 260
Query: 276 VASFQTSYYISGIAPFGDCLVVLAYIPG-EEDGEKEFSSTLPSRQGNAQRPEVRIVTWNN 334
V+ F+T +YISG+AP D LVVL+Y+ E E+E+ + P PE
Sbjct: 261 VSQFETEFYISGLAPLCDQLVVLSYVKEVSEKTEREYCAR-PRLDIIQPLPETC------ 313
Query: 335 DELTTDALPVLGFEHYKAKDYSLAHA 360
+E+++DAL V GF+ + +DY L ++
Sbjct: 314 EEISSDALTVRGFQENECRDYHLEYS 339
>FB|FBgn0002566 [details] [associations]
symbol:lt "light" species:7227 "Drosophila melanogaster"
[GO:0006727 "ommochrome biosynthetic process" evidence=IMP]
[GO:0007033 "vacuole organization" evidence=NAS] [GO:0006726 "eye
pigment biosynthetic process" evidence=NAS] [GO:0007041 "lysosomal
transport" evidence=TAS] [GO:0046907 "intracellular transport"
evidence=TAS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0033227 "dsRNA transport" evidence=IMP] [GO:0008340
"determination of adult lifespan" evidence=IMP] [GO:0006897
"endocytosis" evidence=IMP] [GO:0007220 "Notch receptor processing"
evidence=IMP] InterPro:IPR001841 InterPro:IPR017986
InterPro:IPR000547 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00637 PROSITE:PS50089 SMART:SM00184
SMART:SM00299 SMART:SM00320 GO:GO:0008340 GO:GO:0006886
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0046872 GO:GO:0008270
GO:GO:0006897 GO:GO:0005622 GO:GO:0007220 GO:GO:0033227
GO:GO:0007041 GO:GO:0006727 eggNOG:NOG285467 InterPro:IPR016902
PIRSF:PIRSF028921 EMBL:AF034571 PIR:T09455
ProteinModelPortal:O76248 SMR:O76248 DIP:DIP-22828N STRING:O76248
PaxDb:O76248 PRIDE:O76248 FlyBase:FBgn0002566 InParanoid:O76248
OrthoDB:EOG4HHMHB ArrayExpress:O76248 Bgee:O76248 Uniprot:O76248
Length = 841
Score = 579 (208.9 bits), Expect = 3.1e-95, Sum P(2) = 3.1e-95
Identities = 140/433 (32%), Positives = 220/433 (50%)
Query: 376 DEPLYYIVSPKDVVIAKPRDAEDHIAWLLEHGWHEKALAAVEAGQGRSELLDEVGSRYLD 435
+E +YIV+PKD+V+A + +D I WL++H E+A+ + A G +L V Y++
Sbjct: 345 EENRFYIVAPKDIVVASLIETDDRIEWLIKHSKFEEAMELISANGGNVPVLS-VAKLYIN 403
Query: 436 HLIVERKYAEAASLCPKLLRGSASAWERWVFHFAHLRQLPVLVPYMPTENP-RLRDTAYE 494
HL+ +KY +AA LC ++L WE VF F +QL + Y+PT + +L YE
Sbjct: 404 HLLALKKYDDAAKLCLRMLGNDKVLWEEEVFKFVKCQQLRSVSAYLPTSDECKLDPHVYE 463
Query: 495 VALVALATNPSFHKY-LLSTVKSWPPVIYSALPVISAIEPQLNSSSMTDALKEALAELYV 553
+ L F L+ +K WP +Y L VI+AI L E+LA LY
Sbjct: 464 MVLYEFL---KFDVCGFLNLIKEWPSHLYDGLAVINAIHDNFRKHHANQLL-ESLALLYS 519
Query: 554 IDGHYEKAFSLYADLMKPYIFDFIENHNLHDAIREKVVQLMLLDCKRAVSLLIQNKDLIT 613
G +E A +Y L +F I + L+D I + ++ L+ LD A +L+ K + T
Sbjct: 520 YQGDFESALRMYLKLQNKDVFQLIRRYELYDVISKLIIPLIQLDRDCAFEILLDKKKIKT 579
Query: 614 PSEVVTQLLNARDKCDSRYFLHLYLHALFEVNPHAGKDFHDMQVELYADYDLKMLLPFLR 673
E+V L + +L+ YL +L + +P F + LYA +D LLPFL+
Sbjct: 580 --EIVVHQLEHNQE-----YLYWYLDSLLKKDP--SNVFQKKLISLYAIFDRNKLLPFLK 630
Query: 674 SSQHYTLEKAYEICVKRDLLREQVFILGRMGNTK--HALAVIINKLGDIEEAVEFVNMQH 731
S+ Y +++A IC + + E V++LG MG + AL +II+++ DIE A+EF +H
Sbjct: 631 RSKDYDIQEALVICKQENFYPEIVYLLGCMGGVEASEALNIIIHRIRDIEMAIEFCK-EH 689
Query: 732 DD-ELWEELIKQCLNKPEMVGVLLEHTVGNLDPLYIVNMVPNGLEIPRLRDRLVKIITDY 790
DD +LW LI + PE+V +L+ V P +V + G IP LR L+K++ Y
Sbjct: 690 DDSDLWNALINEFSKHPEIVTKVLDGIVDYFSPAVVVGKIKMGQNIPNLRQSLIKMLRHY 749
Query: 791 RTETSLRHGCNDI 803
+ + I
Sbjct: 750 NLQGEILSSAQQI 762
Score = 392 (143.0 bits), Expect = 3.1e-95, Sum P(2) = 3.1e-95
Identities = 117/336 (34%), Positives = 166/336 (49%)
Query: 37 PRLKYQRMGGSLPSLLANDAASCVAVAERMIALGTHAGTVHILDFLGNQV------KEFP 90
P+ KY R+ L +L D +C AV + + GT G V I D GN V E
Sbjct: 24 PKFKYHRLANDLKYMLNADVITCSAVHLKFLIFGTFRGRVCIFDHQGNSVYSNLSASERH 83
Query: 91 AHTAAVNDLSFDVDGEYVGSCSDDGSVVINSLFT-DEKMKFDYHRPMKAISLDPDYTRKM 149
H AVN++ D GEYV +CSDDG V I LF+ D + + +K +SL+PD ++
Sbjct: 84 THQVAVNNIDVDHKGEYVATCSDDGKVNITGLFSSDNNHSLSFGKFIKVVSLEPD-SKAH 142
Query: 150 SRRFVAGGLAGHLYLNSKKWLGYRDQV-LHSGEGPVHVVKWRTSLIAWANDAGVKVYDAA 208
+RFV G L L + L V L S EG V + W + IAWA+ GV+VYD
Sbjct: 143 IKRFVVGD--DKLILYERNLLKKLKPVELCSVEGSVLSICWHGNFIAWASHIGVRVYDLN 200
Query: 209 NDQRITFI--ERPRGSPRPELLLPHLVWQDDTLLVIGWGTYIKIASI-KTNQSNVANGTY 265
+ I E P R E HL W + L+IGW I++ I K N + G
Sbjct: 201 ERCSLGLIKWEVPP-QERLENFRCHLRWSNKHTLLIGWVDTIRVCVIRKRNSIEASTG-- 257
Query: 266 RHVGMNQVDIVASFQTSYYISGIAPFG-DCLVVLAYIPGEEDGEKEFSSTLPSRQGNAQR 324
++ + VD +++FQT++Y+ G+AP LVVL + KE SS A R
Sbjct: 258 -NLPVYIVDPISTFQTTFYVCGLAPLSAKQLVVLGF-------RKEKSSCF-----KALR 304
Query: 325 PEVRIVTW---NNDELTTDALPVLGFEHYKAKDYSL 357
P + ++ + N++E+ TD+L + GFE Y DYSL
Sbjct: 305 PVLCVIEYKMNNSEEICTDSLTLRGFEEYTVNDYSL 340
>UNIPROTKB|Q618H8 [details] [associations]
symbol:vps-41 "Vacuolar protein sorting-associated protein
41 homolog" species:6238 "Caenorhabditis briggsae" [GO:0006624
"vacuolar protein processing" evidence=ISS] [GO:0007034 "vacuolar
transport" evidence=ISS] [GO:0043066 "negative regulation of
apoptotic process" evidence=ISS] InterPro:IPR001841
InterPro:IPR000547 InterPro:IPR015943 InterPro:IPR016024
Pfam:PF00637 PROSITE:PS50089 SMART:SM00184 SMART:SM00299
Prosite:PS00518 GO:GO:0005773 GO:GO:0006915 GO:GO:0006886
GO:GO:0043066 SUPFAM:SSF48371 GO:GO:0016192 Gene3D:2.130.10.10
GO:GO:0046872 GO:GO:0008270 GO:GO:0007034 GO:GO:0006624
EMBL:HE600983 eggNOG:NOG285467 OMA:NLIAWAN InterPro:IPR016902
PIRSF:PIRSF028921 RefSeq:XP_002644672.1 ProteinModelPortal:Q618H8
EnsemblMetazoa:CBG14653 GeneID:8586668 KEGG:cbr:CBG14653
CTD:8586668 WormBase:CBG14653 HOGENOM:HOG000154827 Uniprot:Q618H8
Length = 898
Score = 728 (261.3 bits), Expect = 5.3e-72, P = 5.3e-72
Identities = 216/800 (27%), Positives = 382/800 (47%)
Query: 37 PRLKYQRMGG--SLPSLLANDAASCVAVAERMIALGTHAGTVHILDFLG----NQVKEFP 90
PR KY+R+ G +LP + S + + ++ IA+GT +G ++ILD G + V
Sbjct: 36 PRFKYERLEGESTLPFMKTATFTS-IDLHDKFIAIGTASGLIYILDHHGYGNFDSVPPLK 94
Query: 91 AHTAAVNDLSFDVDGEYVGSCSDDGSVVINSLFTDEKMKFDYHRPM-KAISLDPDYTRKM 149
H AV+ L FD G Y+ SC++D +V++ + D+ + M K+I PD+ R+
Sbjct: 95 PHRCAVSKLKFDETGSYILSCANDSKLVVSGIGNDKLCCTVNIQVMPKSICFSPDFIRQQ 154
Query: 150 SRR-FVAGGLAGHLYLNSKKWLGYRDQVLHSG---EGPVHVVKWRTSLIAWANDAGVKVY 205
S F+ G +L L K+ Y+ L+SG +G +H W +LIA+ ND G +VY
Sbjct: 155 SGHCFIMG--ERNLVLYEKRLFQYKASNLYSGSERDGFIHCCSWNDNLIAFTNDTGTRVY 212
Query: 206 DAANDQRITFIERPRGSPR--PELLLPHLVWQDDTLLVIGWGTYIKIASIKTNQSNVANG 263
+ ++ +T ++ R P +W + LVIGW + + IK N+ + G
Sbjct: 213 ERGTEKILTSVQPTHDVDRVRSSRCPPKHMWMSENTLVIGWADTVTVLKIKGNEG-MRKG 271
Query: 264 TYRHVGMNQVDIVASFQTSYYISGIA--PFGDCLVVLAYIPGEEDGEK-EFSSTLPSRQG 320
H+ F S +ISGI+ P L + + +GE + +++ S
Sbjct: 272 EIHHI----------FHVSMFISGISYLPKNGSDYELFLVGLQMEGEDFDDCASVMSTMT 321
Query: 321 NAQRPEVRIVTWNNDELTTDALPVLGFEHYKAK-DYSLAHAPFSGSSYAGGQWAAGDEPL 379
E L T + LG + Y+ + + + + S + G L
Sbjct: 322 TLTAMESSATA----TLKTCVIRPLGLKDYELQSEDEIVNIRLSTHTLPYMIHGLGIPYL 377
Query: 380 --YYIVSPKDVVIAKPRDAEDHIAWLLEHGWHEKA--LAAVEAGQ-GRSELLDE-VGSRY 433
Y+I++ K +++A P ED I W L++ + +A +A A ++++ + VG +
Sbjct: 378 STYFILTTKQIIMAVPYGPEDGIKWRLQYKLYTEAFEMAKEHADMLAKTDVSPKKVGRKI 437
Query: 434 LDHLIVERKYAEAASLCPKLLRGSASAWERWVFHFAHLRQLPVLVPYMPTENPRLRDTAY 493
++ + +K AAS + WE V F + +L +P PRL +AY
Sbjct: 438 IEGYLESKKARVAASWLSSICGDCKEEWEWAVDRFHDAKMSTLLGDVLPDSKPRLDPSAY 497
Query: 494 E-VALVALATNPSFHKYLLSTVKSWPPVIYSALPVISAIE---PQLNSSS-MTDA----- 543
E V L +L N + L+ T W P +Y +I + Q++ S + D
Sbjct: 498 EKVLLASLFNNVKLFRRLVQT---WSPDLYMTSTIIDQTQWRIQQISKSEDIEDVEEVEK 554
Query: 544 -LKEALAELYVIDGHYEKAFSLYADLMKPYIFDFIENHNLHDAIREKVVQLMLLDCKRAV 602
L +ALA LY+ + YE A + IF+ I+ H L D +++++ LM ++ +RA+
Sbjct: 555 ILMDALAHLYLYERKYESALKILMICQDFQIFNVIDKHQLFDLVKDQISDLMNINSERAL 614
Query: 603 SLLIQNKDLITPSEVVTQLLNARDKCDSRYFLHLYLHALFEVNPHAGKDFHDMQVELYAD 662
LL+ N D + PS V+ ++ N + K Y L ++ + G +F D V+LYAD
Sbjct: 615 RLLLDNADSVEPSFVMAKI-NGQPKLQLAYLTKL-------MSRNEGIEFADKAVQLYAD 666
Query: 663 YDLKMLLPFLRSSQHYTLEKAYEICVKRDLLREQVFILGRMGNTKHALAVIINKLGDIEE 722
++ K LLPFL+ + +Y + KA ++C R + E +F+L + GN A+ +++ + +IE+
Sbjct: 667 HEKKKLLPFLKKNVNYNVTKARKLCSDRGFVEETIFLLAKSGNHYEAVKMMVREYKNIEK 726
Query: 723 AVEFVNMQHDDELWEELIKQCLNKPEMVGVLLEHTVGNLDPLYIVNMVPNGLEIPRLRDR 782
+ + Q+D +LW L++ + P L+ LDP+ I++ +P+ ++IP L +
Sbjct: 727 VIAYCKDQNDRDLWIHLLEVVADFPTHFSQLIIEASNCLDPILIMDKLPDDVDIPNLSEA 786
Query: 783 LVKIITDYRTETSLRHGCND 802
L K++TD+ L+ C D
Sbjct: 787 LEKLLTDFTNYVELQQCCYD 806
>WB|WBGene00017974 [details] [associations]
symbol:vps-41 species:6239 "Caenorhabditis elegans"
[GO:0006886 "intracellular protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0008219 "cell death" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] InterPro:IPR001841 InterPro:IPR000547
InterPro:IPR011990 InterPro:IPR015943 InterPro:IPR016024
Pfam:PF00637 PROSITE:PS50089 SMART:SM00184 SMART:SM00299
Prosite:PS00518 GO:GO:0009792 GO:GO:0040007 GO:GO:0005773
GO:GO:0006915 GO:GO:0006886 GO:GO:0043066 SUPFAM:SSF48371
GO:GO:0002119 GO:GO:0016192 Gene3D:2.130.10.10 GO:GO:0046872
GO:GO:0008219 GO:GO:0008270 GO:GO:0007034 Gene3D:1.25.40.10
Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006624 EMBL:FO080679
eggNOG:NOG285467 OMA:NLIAWAN InterPro:IPR016902 PIRSF:PIRSF028921
HOGENOM:HOG000154827 EMBL:FO081274 PIR:T16236 RefSeq:NP_001033544.1
RefSeq:NP_001033545.2 RefSeq:NP_001123142.1
ProteinModelPortal:Q19954 SMR:Q19954 STRING:Q19954 PaxDb:Q19954
PRIDE:Q19954 EnsemblMetazoa:F32A6.3c GeneID:180800
KEGG:cel:CELE_F32A6.3 UCSC:F32A6.3b CTD:180800 WormBase:F32A6.3a
WormBase:F32A6.3b WormBase:F32A6.3c GeneTree:ENSGT00390000000481
InParanoid:Q19954 NextBio:911014 Uniprot:Q19954
Length = 901
Score = 710 (255.0 bits), Expect = 4.3e-70, P = 4.3e-70
Identities = 219/806 (27%), Positives = 382/806 (47%)
Query: 37 PRLKYQRMGG--SLPSLLANDAASCVAVAERMIALGTHAGTVHILDFLG----NQVKEFP 90
PR KY+R+ G +LP + S + + ++ IA+GT G ++ILD G + V
Sbjct: 39 PRFKYERLKGEETLPFMKTATFTS-IDLHDKFIAIGTATGLIYILDHHGYGNFDSVPPLK 97
Query: 91 AHTAAVNDLSFDVDGEYVGSCSDDGSVVINSLFTDEKM-KFDYHRPMKAISLDPDYTRKM 149
H AV+ + FD G YV SC++D +V++ + D+ + K+I PD+ R+
Sbjct: 98 PHRCAVSKVKFDETGSYVLSCANDSKIVVSGVGNDKLCCTINIQVMPKSIYFSPDFIRQQ 157
Query: 150 SRR-FVAGGLAGHLYLNSKKWLGYRDQVLHSG---EGPVHVVKWRTSLIAWANDAGVKVY 205
S F+ G +L L K+ Y+ L+SG +G +H W +LIA+ ND G +VY
Sbjct: 158 SGHCFIMG--ERNLVLYEKRMFQYKASSLYSGSERDGFIHCCSWNENLIAFTNDTGTRVY 215
Query: 206 DAANDQRITFIE------RPRGSPRPELLLPHLVWQDDTLLVIGWGTYIKIASIKTNQSN 259
+ ++ IT ++ R R S P P W + LVIGW + I I+ +
Sbjct: 216 ERGAERIITSVQPSHDVDRVRSSRSP----PKHTWMPENNLVIGWADTVTILKIR-DDDG 270
Query: 260 VANGTYRHVGMNQVDIVASFQTSYYI-SGIAPFGDCLVVLAYIPGEE--DGEKEFSS--T 314
V G H+ + I SY SGI LV L + GE+ D S+ T
Sbjct: 271 VKKGEVHHIFHVSMFICG---ISYIPESGIDNMELFLVGLQ-LEGEDFDDCASVISTVTT 326
Query: 315 LPSRQGNA----QRPEVRIVTWNNDELTTDALPVLGFEHYKAKDYSLAHAPFSGSSYAGG 370
L + + +A + +R + EL ++ + E K +++L + G G
Sbjct: 327 LTALESSACTILKTSVIRPLGLKEFELQSEDM----IESVKLSNHTLPYM-IHG---LGI 378
Query: 371 QWAAGDEPLYYIVSPKDVVIAKPRDAEDHIAWLLEHGWHEKALAAVEAGQ---GRSELLD 427
+ A Y+I++ K +++A P ED I W L++ +++AL + +++L
Sbjct: 379 PYLA----TYFILTTKHIIMAVPYGPEDGIRWRLKYKLYDEALDMAKHNADLLSKTDLSP 434
Query: 428 E-VGSRYLDHLIVERKYAEAASLCPKLLRGSASAWERWVFHFAHLRQLPVLVPYMPTENP 486
+ VG ++ + ++ AAS P + WE V F ++ +L +P P
Sbjct: 435 KKVGRMIIEGYLTGKRARAAASRLPLICGECKEEWEWAVNQFEEVKLCTLLAEVLPDGTP 494
Query: 487 RLRDTAYEVALVALATNPSFHKYLLSTVKSWPPVIYSALPVISAIE---PQLNSS-SMTD 542
L Y+ L+A N K V++W P +Y +I + Q++ S ++ D
Sbjct: 495 TLDPECYQKVLIACLFNNV--KQFRKLVQTWSPDLYMTSFIIDRTQWRIQQISKSGNLAD 552
Query: 543 A------LKEALAELYVIDGHYEKAFSLYADLMKPYIFDFIENHNLHDAIREKVVQLMLL 596
L +ALA LY+ + YE A + IF+ I+ H L D +++++ +LM +
Sbjct: 553 VDETERVLMDALAHLYLYERKYESALKILMSCQDFQIFNVIDKHQLFDLVKDQITELMNI 612
Query: 597 DCKRAVSLLIQNKDLITPSEVVTQLLNARDKCDSRYFLHLYLHALFEVNPHAGKDFHDMQ 656
+ +RA+ LL+ N D + PS V+ ++ + K Y L ++ + G +F D
Sbjct: 613 NSERALRLLLDNADSVEPSFVMEKI-GRQPKLQLAYLTKL-------MSRNEGTEFADKA 664
Query: 657 VELYADYDLKMLLPFLRSSQHYTLEKAYEICVKRDLLREQVFILGRMGNTKHALAVIINK 716
V+LYA+YD K LLPFLR + +Y + KA ++C + + E +++L + GN A+ +++ +
Sbjct: 665 VQLYAEYDQKKLLPFLRKNANYNVNKARKLCSDKGYIEETIYLLAKSGNHYDAVKMMVRE 724
Query: 717 LGDIEEAVEFVNMQHDDELWEELIKQCLNKPEMVGVLLEHTVGNLDPLYIVNMVPNGLEI 776
++E+ +++ Q+D +LW L+ P L+ LDPL I++ +P+ +I
Sbjct: 725 YRNMEKVIDYCKDQNDPDLWIHLLGVVAEFPAHFSQLIIEASNCLDPLLIMDKLPDDSDI 784
Query: 777 PRLRDRLVKIITDYRTETSLRHGCND 802
P L + L K++ DY L+ C D
Sbjct: 785 PNLSEALDKLLVDYTNHAELQQCCYD 810
>UNIPROTKB|Q19954 [details] [associations]
symbol:vps-41 "Vacuolar protein sorting-associated protein
41 homolog" species:6239 "Caenorhabditis elegans" [GO:0007034
"vacuolar transport" evidence=IMP] [GO:0003674 "molecular_function"
evidence=ND] [GO:0006624 "vacuolar protein processing"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0005773 "vacuole" evidence=IC]
InterPro:IPR001841 InterPro:IPR000547 InterPro:IPR011990
InterPro:IPR015943 InterPro:IPR016024 Pfam:PF00637 PROSITE:PS50089
SMART:SM00184 SMART:SM00299 Prosite:PS00518 GO:GO:0009792
GO:GO:0040007 GO:GO:0005773 GO:GO:0006915 GO:GO:0006886
GO:GO:0043066 SUPFAM:SSF48371 GO:GO:0002119 GO:GO:0016192
Gene3D:2.130.10.10 GO:GO:0046872 GO:GO:0008219 GO:GO:0008270
GO:GO:0007034 Gene3D:1.25.40.10 Gene3D:3.30.40.10
InterPro:IPR013083 GO:GO:0006624 EMBL:FO080679 eggNOG:NOG285467
OMA:NLIAWAN InterPro:IPR016902 PIRSF:PIRSF028921
HOGENOM:HOG000154827 EMBL:FO081274 PIR:T16236 RefSeq:NP_001033544.1
RefSeq:NP_001033545.2 RefSeq:NP_001123142.1
ProteinModelPortal:Q19954 SMR:Q19954 STRING:Q19954 PaxDb:Q19954
PRIDE:Q19954 EnsemblMetazoa:F32A6.3c GeneID:180800
KEGG:cel:CELE_F32A6.3 UCSC:F32A6.3b CTD:180800 WormBase:F32A6.3a
WormBase:F32A6.3b WormBase:F32A6.3c GeneTree:ENSGT00390000000481
InParanoid:Q19954 NextBio:911014 Uniprot:Q19954
Length = 901
Score = 710 (255.0 bits), Expect = 4.3e-70, P = 4.3e-70
Identities = 219/806 (27%), Positives = 382/806 (47%)
Query: 37 PRLKYQRMGG--SLPSLLANDAASCVAVAERMIALGTHAGTVHILDFLG----NQVKEFP 90
PR KY+R+ G +LP + S + + ++ IA+GT G ++ILD G + V
Sbjct: 39 PRFKYERLKGEETLPFMKTATFTS-IDLHDKFIAIGTATGLIYILDHHGYGNFDSVPPLK 97
Query: 91 AHTAAVNDLSFDVDGEYVGSCSDDGSVVINSLFTDEKM-KFDYHRPMKAISLDPDYTRKM 149
H AV+ + FD G YV SC++D +V++ + D+ + K+I PD+ R+
Sbjct: 98 PHRCAVSKVKFDETGSYVLSCANDSKIVVSGVGNDKLCCTINIQVMPKSIYFSPDFIRQQ 157
Query: 150 SRR-FVAGGLAGHLYLNSKKWLGYRDQVLHSG---EGPVHVVKWRTSLIAWANDAGVKVY 205
S F+ G +L L K+ Y+ L+SG +G +H W +LIA+ ND G +VY
Sbjct: 158 SGHCFIMG--ERNLVLYEKRMFQYKASSLYSGSERDGFIHCCSWNENLIAFTNDTGTRVY 215
Query: 206 DAANDQRITFIE------RPRGSPRPELLLPHLVWQDDTLLVIGWGTYIKIASIKTNQSN 259
+ ++ IT ++ R R S P P W + LVIGW + I I+ +
Sbjct: 216 ERGAERIITSVQPSHDVDRVRSSRSP----PKHTWMPENNLVIGWADTVTILKIR-DDDG 270
Query: 260 VANGTYRHVGMNQVDIVASFQTSYYI-SGIAPFGDCLVVLAYIPGEE--DGEKEFSS--T 314
V G H+ + I SY SGI LV L + GE+ D S+ T
Sbjct: 271 VKKGEVHHIFHVSMFICG---ISYIPESGIDNMELFLVGLQ-LEGEDFDDCASVISTVTT 326
Query: 315 LPSRQGNA----QRPEVRIVTWNNDELTTDALPVLGFEHYKAKDYSLAHAPFSGSSYAGG 370
L + + +A + +R + EL ++ + E K +++L + G G
Sbjct: 327 LTALESSACTILKTSVIRPLGLKEFELQSEDM----IESVKLSNHTLPYM-IHG---LGI 378
Query: 371 QWAAGDEPLYYIVSPKDVVIAKPRDAEDHIAWLLEHGWHEKALAAVEAGQ---GRSELLD 427
+ A Y+I++ K +++A P ED I W L++ +++AL + +++L
Sbjct: 379 PYLA----TYFILTTKHIIMAVPYGPEDGIRWRLKYKLYDEALDMAKHNADLLSKTDLSP 434
Query: 428 E-VGSRYLDHLIVERKYAEAASLCPKLLRGSASAWERWVFHFAHLRQLPVLVPYMPTENP 486
+ VG ++ + ++ AAS P + WE V F ++ +L +P P
Sbjct: 435 KKVGRMIIEGYLTGKRARAAASRLPLICGECKEEWEWAVNQFEEVKLCTLLAEVLPDGTP 494
Query: 487 RLRDTAYEVALVALATNPSFHKYLLSTVKSWPPVIYSALPVISAIE---PQLNSS-SMTD 542
L Y+ L+A N K V++W P +Y +I + Q++ S ++ D
Sbjct: 495 TLDPECYQKVLIACLFNNV--KQFRKLVQTWSPDLYMTSFIIDRTQWRIQQISKSGNLAD 552
Query: 543 A------LKEALAELYVIDGHYEKAFSLYADLMKPYIFDFIENHNLHDAIREKVVQLMLL 596
L +ALA LY+ + YE A + IF+ I+ H L D +++++ +LM +
Sbjct: 553 VDETERVLMDALAHLYLYERKYESALKILMSCQDFQIFNVIDKHQLFDLVKDQITELMNI 612
Query: 597 DCKRAVSLLIQNKDLITPSEVVTQLLNARDKCDSRYFLHLYLHALFEVNPHAGKDFHDMQ 656
+ +RA+ LL+ N D + PS V+ ++ + K Y L ++ + G +F D
Sbjct: 613 NSERALRLLLDNADSVEPSFVMEKI-GRQPKLQLAYLTKL-------MSRNEGTEFADKA 664
Query: 657 VELYADYDLKMLLPFLRSSQHYTLEKAYEICVKRDLLREQVFILGRMGNTKHALAVIINK 716
V+LYA+YD K LLPFLR + +Y + KA ++C + + E +++L + GN A+ +++ +
Sbjct: 665 VQLYAEYDQKKLLPFLRKNANYNVNKARKLCSDKGYIEETIYLLAKSGNHYDAVKMMVRE 724
Query: 717 LGDIEEAVEFVNMQHDDELWEELIKQCLNKPEMVGVLLEHTVGNLDPLYIVNMVPNGLEI 776
++E+ +++ Q+D +LW L+ P L+ LDPL I++ +P+ +I
Sbjct: 725 YRNMEKVIDYCKDQNDPDLWIHLLGVVAEFPAHFSQLIIEASNCLDPLLIMDKLPDDSDI 784
Query: 777 PRLRDRLVKIITDYRTETSLRHGCND 802
P L + L K++ DY L+ C D
Sbjct: 785 PNLSEALDKLLVDYTNHAELQQCCYD 810
>POMBASE|SPAP27G11.05c [details] [associations]
symbol:vps41 "HOPS complex subunit Vps41 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006623 "protein targeting to vacuole"
evidence=ISS] [GO:0006895 "Golgi to endosome transport"
evidence=ISS] [GO:0007033 "vacuole organization" evidence=ISS]
[GO:0030897 "HOPS complex" evidence=ISS] [GO:0042144 "vacuole
fusion, non-autophagic" evidence=ISS] [GO:0045324 "late endosome to
vacuole transport" evidence=ISS] [GO:0048278 "vesicle docking"
evidence=ISS] InterPro:IPR017986 InterPro:IPR000547
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00637 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPAP27G11.05c EMBL:CU329670
GenomeReviews:CU329670_GR Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0030897 GO:GO:0006895 GO:GO:0006623
GO:GO:0045324 GO:GO:0042144 GO:GO:0048278 eggNOG:NOG285467
InterPro:IPR016902 PIRSF:PIRSF028921 RefSeq:NP_593409.2
EnsemblFungi:SPAP27G11.05c.1 GeneID:2542058 OrthoDB:EOG498Z81
NextBio:20803132 Uniprot:Q9P7N3
Length = 871
Score = 663 (238.4 bits), Expect = 4.1e-65, P = 4.1e-65
Identities = 166/546 (30%), Positives = 288/546 (52%)
Query: 272 QVDIVASFQTSYYISGIAPFGDCLVVLAYIPGEEDGEKEFSSTLPSRQGNAQRPEVRIVT 331
++ + A + +SG+ G ++ LAYI ED F+S +PS++ RPE+R++
Sbjct: 251 KISLQALLEIDSIVSGVLMLGFNILTLAYIANVED----FTSAIPSQRIEGCRPELRLID 306
Query: 332 WNNDELTTDALPVLGFEHYKAKDYSLAHAPFSGSSYAGGQWAAGDEPLYYIVSPKDVVIA 391
+ EL DA+ + + + DY L P S +S++ +++SP D+V
Sbjct: 307 SSFKELCGDAIGLANYSRLQPSDYHLLPDP-SSNSHS------------FVISPNDIVYV 353
Query: 392 KPRDAEDHIAWLLEHGWHEKALAAVEAGQG--RSELLDEVGSRYLDHLIVERKYAEAASL 449
+ R+ DH+ +L+ + +A+ AV+ S + E+ +Y+ HL+ + +Y EA +
Sbjct: 354 RERNQIDHVKYLVSKEMYAEAIDAVKKLPEIPPSLQISELAKKYIFHLLGKGQYKEAGMV 413
Query: 450 CPKLLRGSASAWERWVFHFAHLRQLPVLVPYMPTENPRLRDTAYEVALVA-LATNP-SFH 507
P L + + WE+WVF FA L + ++PT L YE+ L LAT+ +F+
Sbjct: 414 IPSLYNDNLAEWEQWVFVFAENDHLEDIADFLPTGENHLSPLVYEMILAQYLATDERTFN 473
Query: 508 KYLLSTVKSWPPVIYSALPVISAIEPQLNSSSMTDALKEALAELYVIDGHYEKAFSLYAD 567
K L WP ++YS + +A + + + L E+LA LY+ D AF LY
Sbjct: 474 KKL----HEWPTMLYSVSTIRNATLKKFKENQKSSTLTESLAFLYLEDNMPIDAFHLYLK 529
Query: 568 LMKPYIFDFIENHNLHDAIREKVVQLMLL-------DCKRAVS-LLIQNKDLITPSEVVT 619
L D I HNL+D R V+ LML+ D K A+S +L+Q+ P EV+
Sbjct: 530 LHSELCIDLILQHNLYDEARASVLLLMLISSKGKSSDTKSAMSSMLVQHVHSFPPQEVIM 589
Query: 620 QLLNARDKCDSRYFLHLYLHALFEVNPHAGKDFHDMQVELYADYDLKMLLPFLRSSQHYT 679
Q+ + FL+ Y + P++ ++ D++++++A++D K FL ++Q Y+
Sbjct: 590 QIHSVPQ------FLYEYFCEFELMYPNSLMEYGDLKLDVFAEFDRKRFFDFLVNTQCYS 643
Query: 680 LEKAYEICVKRDLLREQVFILGRMGNTKHALAVIINKLGDIEEAVEFVNMQHDDELWEEL 739
L+ A +IC + + L E V+ILGRMGN K AL +IIN+L DI A+ +V Q D ELW++L
Sbjct: 644 LDHAAQICKQYNYLDELVYILGRMGNNKEALMLIINELLDIGRAIRYVKEQADRELWDDL 703
Query: 740 IKQCLNKPEMVGVLLEHTVGNLDPLYIVNMVPNGLEIPRLRDRLVKIITDYRTETSLRHG 799
I L+KPE + LLE+ + + +++ +P G ++P ++ + K++ D++++ L
Sbjct: 704 ISYSLDKPEFICTLLENIGTDENARNLLSKIPPGTKLPHMKKSISKLLADHQSQVQLYQS 763
Query: 800 CNDILK 805
C + K
Sbjct: 764 CYKLFK 769
Score = 503 (182.1 bits), Expect = 2.1e-45, P = 2.1e-45
Identities = 110/329 (33%), Positives = 182/329 (55%)
Query: 37 PRLKYQRMGGSLPSLLANDAASCVAVAERMIALGTHAGTVHILDFLGNQVKEFPAHTAAV 96
P+L Y+R+ ND S A+++ G+H G ++I G +++ H+A+V
Sbjct: 24 PKLIYERITEKFQGCFMNDTISACAISKEHFFFGSHNGAIYIYQKNGILLRKMILHSASV 83
Query: 97 NDLSFDVDGEYVGSCSDDGSVVINSLFTDEKMKFDYHRPMKAISLDPDYTRKMSRRFVAG 156
DLS D++ E + SCS DG ++I+++ T E D+ RP+ ++++DP Y+ + SR+ ++G
Sbjct: 84 VDLSVDLESENLASCSMDGKMIISNITTRETTVHDFKRPLLSVAIDPYYSTRSSRQVLSG 143
Query: 157 GLAGHLYLNSKKWLGYRDQVLHSGEGPVHVVKWRTSLIAWANDAGVKVYDAANDQRITFI 216
G AG + L+ K WLG +D VL + G V+ + W T+ IAWA+D G+ VY + + +
Sbjct: 144 GRAGKVVLSEKGWLGNKDTVLQADCGAVYKISWYTTYIAWASDLGITVYSTEFGKVLGRL 203
Query: 217 ERPRGSPRPELLLPHLVWQDDTLLVIGWGTYIKIASIKTNQSNVANGTYRHVGMNQVDIV 276
E P+ P E+ L WQ ++ LVIGW I I SI+ +SNVAN + ++ +
Sbjct: 204 EPPKRLPNDEIFPYQLFWQSESRLVIGWSDQIMIVSIQ--RSNVANE------LPKISLQ 255
Query: 277 ASFQTSYYISGIAPFGDCLVVLAYIPGEEDGEKEFSSTLPSRQGNAQRPEVRIVTWNNDE 336
A + +SG+ G ++ LAYI ED F+S +PS++ RPE+R++ + E
Sbjct: 256 ALLEIDSIVSGVLMLGFNILTLAYIANVED----FTSAIPSQRIEGCRPELRLIDSSFKE 311
Query: 337 LTTDALPVLGFEHYKAKDYSLAHAPFSGS 365
L DA+ + + + DY L P S S
Sbjct: 312 LCGDAIGLANYSRLQPSDYHLLPDPSSNS 340
>ASPGD|ASPL0000073993 [details] [associations]
symbol:vps41 species:162425 "Emericella nidulans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR017986 InterPro:IPR000547
InterPro:IPR001680 InterPro:IPR011990 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00637 SMART:SM00320 GO:GO:0006886 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005622 Gene3D:1.25.40.10
EMBL:BN001303 EMBL:AACD01000084 eggNOG:NOG285467 OMA:RNGDATS
RefSeq:XP_662480.1 EnsemblFungi:CADANIAT00005529 GeneID:2872678
KEGG:ani:AN4876.2 HOGENOM:HOG000197548 OrthoDB:EOG4C8C1G
Uniprot:Q5B3K4
Length = 1280
Score = 273 (101.2 bits), Expect = 5.6e-63, Sum P(7) = 5.6e-63
Identities = 51/154 (33%), Positives = 91/154 (59%)
Query: 652 FHDMQVELYADYDLKMLLPFLRSSQHYTLEKAYEICVKRDLLREQVFILGRMGNTKHALA 711
F D EL+A Y+ +L+ FL++S Y+ + A IC + E +++L +MG TK AL
Sbjct: 962 FADTAAELFAQYERPLLMEFLQTSTSYSFDVAVTICEQYRFTPELIYLLSKMGQTKRALN 1021
Query: 712 VIINKLGDIEEAVEFVNMQHDDELWEELIKQCLNKPEMVGVLLEHTVGNLDPLYIVNMVP 771
+I++ L D+ +A+ F Q D +LWE+L+ ++KP + LL ++DP+ +V +P
Sbjct: 1022 LILSDLKDVSQAIAFAKSQDDPDLWEDLVDYSMDKPRFIHGLLVEAGTSIDPIKLVRRIP 1081
Query: 772 NGLEIPRLRDRLVKIITDYRTETSLRHGCNDILK 805
+GLEI LR+ L ++ ++ + S+ G +L+
Sbjct: 1082 SGLEIEGLREGLTGLLREHDLQASISQGAAKVLQ 1115
Score = 158 (60.7 bits), Expect = 5.6e-63, Sum P(7) = 5.6e-63
Identities = 42/176 (23%), Positives = 80/176 (45%)
Query: 429 VGSRYLDHLIVERKYAEAASLCPKLLRGSASAWERWVFHFAHLRQLPVLVPYMPTE-NPR 487
+G +++ LI + ++ EAA +C + L + S WE W + F + + +P + P
Sbjct: 693 IGEMWIEQLIRDNRWQEAARVCVQAL-SATSRWEHWAWTFIKENKFDEITSVIPVDLRPS 751
Query: 488 LRDTAYEVALVALATNPSFHKYLLSTVKSWPPVIYSALPVISAIEPQLNSSSMTDALKEA 547
L Y L T K+ ++WP ++ + ++IE QL S MT L++
Sbjct: 752 LSSEIYGAILEHYLTRDR-QKFS-ELFETWPFELFDIDSITTSIEEQLESEKMTPDLEDG 809
Query: 548 ------LAELYVIDGHYEKAFSLYADLMKP-YIFDFIENHNLHDAIREKVVQLMLL 596
LA LY+ GHY A Y + +++H+L D++ + + +++
Sbjct: 810 RILIRCLARLYLTGGHYTDALHCYIRIQDADAAMALVKDHHLLDSLSDDIPAFIMI 865
Score = 146 (56.5 bits), Expect = 5.6e-63, Sum P(7) = 5.6e-63
Identities = 37/124 (29%), Positives = 66/124 (53%)
Query: 240 LVIGWGTYIKIASIKTNQSNVANGTYRHVGMNQVDIVASFQTSYYISGIAPFGDC-LVVL 298
LV+GWG + + ++ ++ N +N R + + V++ +T ISGI+ + LVVL
Sbjct: 402 LVVGWGGTVWVINVYPDRPNKSN---RDLRIGSVEVATILRTDCIISGISLYSPSHLVVL 458
Query: 299 AYIPGEEDGEKEFSSTLPSRQGNAQRPEVRIVTWNN-DELTTDALPVLGFEHYKAKDYSL 357
AYI E + E + R+ Q PE+RI+ + +E++ D L + +E+ A DY +
Sbjct: 459 AYIEAENEPADE---QITRRRPRGQEPELRIIDIESKEEVSADTLAISRYENLTASDYHM 515
Query: 358 AHAP 361
+ P
Sbjct: 516 SVLP 519
Score = 110 (43.8 bits), Expect = 5.6e-63, Sum P(7) = 5.6e-63
Identities = 24/61 (39%), Positives = 39/61 (63%)
Query: 107 YVGSCSDDGSVVINSLF-TDEKMKFDYHRPMKAISLDPDYTRKMSRRFVAGGLAGHLYLN 165
Y+ S S DG+V + SL T + + ++ RP++A++L P+Y K R F++GG AG L L
Sbjct: 197 YIASSSIDGNVCVASLLDTKDVLLRNFGRPVQAVALSPEY--KSDRTFISGGRAGELILT 254
Query: 166 S 166
+
Sbjct: 255 T 255
Score = 98 (39.6 bits), Expect = 5.6e-63, Sum P(7) = 5.6e-63
Identities = 26/83 (31%), Positives = 41/83 (49%)
Query: 173 RDQVLHSGEGPVHVVKWRTS--LIAWANDAGVKVY------DAANDQ----RITFIERPR 220
+D VLHSGEG + VKW S +AW N+ G+K+ D+ + + R++ +RP
Sbjct: 290 KDTVLHSGEGAISTVKWSLSGKYVAWVNEEGIKIMRSNLHLDSVDSELAWKRVSHTDRPN 349
Query: 221 GSPRPELLL---PHLVWQDDTLL 240
E+ W D++LL
Sbjct: 350 RQGWEEMASVWKARAEWVDESLL 372
Score = 88 (36.0 bits), Expect = 5.6e-63, Sum P(7) = 5.6e-63
Identities = 22/60 (36%), Positives = 30/60 (50%)
Query: 373 AAGDEPLYYIVSPKDVVIAKPRDAEDHIAWLLEHGWHEKALAAVEA---GQGRSELLDEV 429
A P ++ SP D V A RD DH+AWL+EH + +A ++ G SE D V
Sbjct: 594 AESSGPKIFVHSPYDCVAALKRDLADHLAWLIEHEKYAEAWKLLDEHPEAAGSSEGSDNV 653
Score = 85 (35.0 bits), Expect = 5.6e-63, Sum P(7) = 5.6e-63
Identities = 23/67 (34%), Positives = 35/67 (52%)
Query: 37 PRLKYQRMGGSLPSLLAN-DAASC-VAVAERMIALGTHAGTVHILDF-LGNQVKEFPAHT 93
P LK + L S N DA S +A ++M+ LGTH G +H+ L ++ + AH+
Sbjct: 78 PHLKCSHLTKQLGSAYRNGDATSTFLAAGDKMV-LGTHNGNIHVFSVPLFRSLRVYHAHS 136
Query: 94 AAVNDLS 100
A V +S
Sbjct: 137 ATVTSIS 143
Score = 49 (22.3 bits), Expect = 4.2e-46, Sum P(5) = 4.2e-46
Identities = 19/83 (22%), Positives = 34/83 (40%)
Query: 45 GGSLPSLLANDAASCVAVAERMIALGTHAGTVH----ILDFLGNQVKEFPAHTA--AVND 98
GG L+ V V+ LG A T GN K+ H+ A++
Sbjct: 245 GGRAGELILTTGGK-VGVSTNSTTLGGAAATASSWLGTFGLGGNTGKDTVLHSGEGAIST 303
Query: 99 LSFDVDGEYVGSCSDDGSVVINS 121
+ + + G+YV +++G ++ S
Sbjct: 304 VKWSLSGKYVAWVNEEGIKIMRS 326
Score = 38 (18.4 bits), Expect = 1.0e-25, Sum P(6) = 1.0e-25
Identities = 6/26 (23%), Positives = 15/26 (57%)
Query: 553 VIDGHYEKAFSLYADLMKPYIFDFIE 578
++D + A L+A +P + +F++
Sbjct: 958 LVDQFADTAAELFAQYERPLLMEFLQ 983
>UNIPROTKB|G4N984 [details] [associations]
symbol:MGG_03313 "Vacuolar assembly protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR001841 InterPro:IPR017986 InterPro:IPR000547
InterPro:IPR011990 InterPro:IPR015943 Pfam:PF00637 SMART:SM00184
GO:GO:0006886 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0008270 GO:GO:0005622 Gene3D:1.25.40.10 EMBL:CM001234
RefSeq:XP_003716647.1 EnsemblFungi:MGG_03313T0 GeneID:2676667
KEGG:mgr:MGG_03313 Uniprot:G4N984
Length = 1357
Score = 302 (111.4 bits), Expect = 1.5e-51, Sum P(6) = 1.5e-51
Identities = 55/155 (35%), Positives = 93/155 (60%)
Query: 651 DFHDMQVELYADYDLKMLLPFLRSSQHYTLEKAYEICVKRDLLREQVFILGRMGNTKHAL 710
DF D+ V+++A YD +L+ FL S Y+ EKA ++C + + + E V++ + G K AL
Sbjct: 1027 DFADLAVQMFATYDRSLLMEFLEHSLSYSFEKAEKVCEEHNFIPELVYLYAKTGQMKRAL 1086
Query: 711 AVIINKLGDIEEAVEFVNMQHDDELWEELIKQCLNKPEMVGVLLEHTVGNLDPLYIVNMV 770
+II++L D+ A+ F Q D +LWE+L+ ++KP + LLE +DP+ +V +
Sbjct: 1087 YLIIDRLADVSRAIAFAKTQDDPDLWEDLLNYSMDKPRFIRALLEEVGTAIDPITLVRRI 1146
Query: 771 PNGLEIPRLRDRLVKIITDYRTETSLRHGCNDILK 805
P GLEIP LR+ L I+ ++ + S+ G +L+
Sbjct: 1147 PEGLEIPGLREGLTHIMKEHEIQHSISSGVARVLR 1181
Score = 151 (58.2 bits), Expect = 1.5e-51, Sum P(6) = 1.5e-51
Identities = 54/214 (25%), Positives = 94/214 (43%)
Query: 429 VGSRYLDHLIVERKYAEAASLCPKLLRGSASAWERWVFHFAHLRQLPVLVPYMPTE--NP 486
+G +L LI + + +A + K+L GS+ WE+W++ FA + +V Y+PTE P
Sbjct: 755 IGELWLQDLIEDNDWVKAGQIAAKVL-GSSERWEKWIWTFAGADKFDEIVNYVPTEPMRP 813
Query: 487 RLRDTAYEVAL--VALATNPSFHKYLLSTVKSWPPVIYSALPVISAIEPQLN-----SSS 539
+ + YEV L P F + L WP ++ A + + +E QL S
Sbjct: 814 PIDGSVYEVMLGHYLREDKPRFRELL----DRWPVELFDANTIATTLENQLKYRDVREDS 869
Query: 540 MTDALK--------EALAELYVIDGHYEKAFSLYADLMKPY-IFDFIENHNLHDAIREKV 590
+ D K E+LA L+ +G +A L F I +L DA+ + +
Sbjct: 870 VEDGEKGRDWRIVMESLARLHEANGRLREALKCNIRLQDAENAFRLIREGHLADAVVDDI 929
Query: 591 VQLMLLDCKRAVSLLIQNKDL-ITPSEVVTQLLN 623
+LL + + +++ SE +T L++
Sbjct: 930 PSFILLRLPSGMETKMSLEEVEAATSEAITLLVD 963
Score = 100 (40.3 bits), Expect = 1.5e-51, Sum P(6) = 1.5e-51
Identities = 25/62 (40%), Positives = 37/62 (59%)
Query: 173 RDQVLHSGEGPVHVVKWRTS--LIAWANDAGVKVY------DAAN-D---QRITFIERPR 220
+D VLHSGEG + +KW S +AW N+ G+K+ D+A+ D +RI I+RP+
Sbjct: 301 KDTVLHSGEGTISTIKWSLSGKYVAWLNEHGIKIMRSKIKLDSADADDAWKRIGHIDRPQ 360
Query: 221 GS 222
S
Sbjct: 361 SS 362
Score = 99 (39.9 bits), Expect = 1.8e-51, Sum P(6) = 1.8e-51
Identities = 28/96 (29%), Positives = 48/96 (50%)
Query: 107 YVGSCSDDGSVVINSLFTDEKMKF-DYHRPMKAISLDPDYTRKMSRRFVAGGLAGHLYLN 165
++ + S DG+V + SL ++ ++ RP++A++L P+Y K + +++GGLAG L L
Sbjct: 209 HIATSSMDGNVCVQSLMERRDVQLRNFARPVQAVALSPEY--KSDKTYLSGGLAGSLILT 266
Query: 166 SKKWLGYRDQVLHSGEGPVHVVKWRTSLIAWANDAG 201
G + G W S I A +AG
Sbjct: 267 VGGQTGKSNSTT-IGTAAATASSWLGS-IGLAGNAG 300
Score = 98 (39.6 bits), Expect = 1.5e-51, Sum P(6) = 1.5e-51
Identities = 24/66 (36%), Positives = 38/66 (57%)
Query: 37 PRLKYQRMGGSLPSLLAN-DAASCVAVAERMIALGTHAGTVHILDFLGNQ-VKEFPAHTA 94
PRLKY R+ +L ++ N DA S VA + +GTH+G +H + Q + + AH+A
Sbjct: 82 PRLKYTRLTQNLGAVYKNGDATSSFLVAGDKMIIGTHSGNIHAVQLPSFQTLLVYHAHSA 141
Query: 95 AVNDLS 100
+V +S
Sbjct: 142 SVTSVS 147
Score = 87 (35.7 bits), Expect = 4.7e-47, Sum P(5) = 4.7e-47
Identities = 47/174 (27%), Positives = 73/174 (41%)
Query: 168 KWLGYRDQVLHSGEGPVHVVKWRTSLIAWANDAGVKVYDAAN-----DQRITFIERPRGS 222
K +G+ D+ S E WR W ++ V++ D A+ D R S
Sbjct: 351 KRIGHIDRP-QSSEWDAMASAWR-GRAEWMDEQAVEMDDNADTTLVGDSRSDQDSSGTLS 408
Query: 223 PRPELLLPHLVWQDDTL--LVIGWGTYIKIASIKTNQSNVA-NGTYRHVGMNQVDIVASF 279
P L D T+ LV+GWG I + + V N + VG + +I
Sbjct: 409 PAAAKLKQQQSKHDKTIEKLVVGWGGTIWVIHVHPGGMGVGKNAGEKSVG--RAEIHQKL 466
Query: 280 QTSYYISGIAPFGDCLV-VLAY-IP------GEEDGEKEFSSTLPSRQGNAQRP 325
+ ISGI+ + L+ +LAY +P +EDG+ E + T P +G+ RP
Sbjct: 467 RMDCIISGISLYTQSLLLILAYCLPEDEDEDDDEDGDGEKTPTQP--RGHRSRP 518
Score = 84 (34.6 bits), Expect = 1.5e-51, Sum P(6) = 1.5e-51
Identities = 20/57 (35%), Positives = 28/57 (49%)
Query: 356 SLAHAPFSGSSYAGGQWAAGDEPLYYIVSPKDVVIAKPRDAEDHIAWLLEHGWHEKA 412
S APF + A P ++ SP D V+A RD DH+ WL+EH ++ A
Sbjct: 637 SSIRAPFKLQTQAVHPSLETPGPKIFMHSPYDCVLATKRDLGDHLTWLVEHQEYQAA 693
Score = 71 (30.1 bits), Expect = 1.5e-51, Sum P(6) = 1.5e-51
Identities = 19/61 (31%), Positives = 27/61 (44%)
Query: 302 PGEEDGEKEFSSTLPSRQGNAQRPEVRIVTWNND-ELTTDALPVLGFEHYKAKDYSLAHA 360
P E S + RQ N Q PE+R++ + E+ D L + +E A DY L
Sbjct: 518 PSAASSSSEPSGGIRRRQNN-QPPELRLIDLKSQSEIYKDGLSISRYERLSASDYHLGVL 576
Query: 361 P 361
P
Sbjct: 577 P 577
Score = 50 (22.7 bits), Expect = 6.2e-39, Sum P(4) = 6.2e-39
Identities = 22/92 (23%), Positives = 41/92 (44%)
Query: 319 QGNAQRPEVRI-VTWNNDELTTDALPVLGFEHYKAKDYSLAHAPFSGSSYAGGQWAAGDE 377
Q A PE + T+ + L + +G + K+ ++ A + SS+ G AG+
Sbjct: 240 QAVALSPEYKSDKTYLSGGLAGSLILTVGGQTGKSNSTTIGTAAATASSWLGSIGLAGNA 299
Query: 378 PLYYIVSPKDVVIA--KPRDAEDHIAWLLEHG 407
++ + I+ K + ++AWL EHG
Sbjct: 300 GKDTVLHSGEGTISTIKWSLSGKYVAWLNEHG 331
>SGD|S000002487 [details] [associations]
symbol:VPS41 "Subunit of the HOPS complex" species:4932
"Saccharomyces cerevisiae" [GO:0035542 "regulation of SNARE complex
assembly" evidence=IDA] [GO:0006810 "transport" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA;IMP] [GO:0000329
"fungal-type vacuole membrane" evidence=IDA] [GO:0016192
"vesicle-mediated transport" evidence=IEA;IMP] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IMP] [GO:0035091
"phosphatidylinositol binding" evidence=IDA] [GO:0005773 "vacuole"
evidence=IEA] [GO:0032889 "regulation of vacuole fusion,
non-autophagic" evidence=IDA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0030897 "HOPS complex" evidence=IPI]
[GO:0006624 "vacuolar protein processing" evidence=IMP] [GO:0005768
"endosome" evidence=IDA] [GO:0042144 "vacuole fusion,
non-autophagic" evidence=IMP;IDA] [GO:0007033 "vacuole
organization" evidence=IMP] [GO:0017112 "Rab guanyl-nucleotide
exchange factor activity" evidence=IPI] InterPro:IPR017986
InterPro:IPR000547 InterPro:IPR001680 InterPro:IPR011990
InterPro:IPR015943 Pfam:PF00400 Pfam:PF00637 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00299 SMART:SM00320 SGD:S000002487
GO:GO:0006886 GO:GO:0016192 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0015031 GO:GO:0005768 EMBL:BK006938
GO:GO:0000329 Gene3D:1.25.40.10 EMBL:Z46796 EMBL:X82086
GO:GO:0030897 GO:GO:0017112 GO:GO:0032889 GO:GO:0034727
GO:GO:0006624 GO:GO:0042144 GO:GO:0035542 RefSeq:NP_010365.3
GeneID:851653 KEGG:sce:YDR080W EMBL:Z74376 RefSeq:NP_010369.3
GeneID:851657 KEGG:sce:YDR084C eggNOG:NOG285467 InterPro:IPR016902
PIRSF:PIRSF028921 GeneTree:ENSGT00390000000481 OrthoDB:EOG498Z81
EMBL:AB000223 PIR:S49835 ProteinModelPortal:P38959 SMR:P38959
DIP:DIP-834N IntAct:P38959 MINT:MINT-615238 STRING:P38959
PaxDb:P38959 PeptideAtlas:P38959 EnsemblFungi:YDR080W CYGD:YDR080w
HOGENOM:HOG000141972 OMA:RNGDATS NextBio:969245
Genevestigator:P38959 GermOnline:YDR080W Uniprot:P38959
Length = 992
Score = 220 (82.5 bits), Expect = 1.8e-39, Sum P(3) = 1.8e-39
Identities = 55/202 (27%), Positives = 104/202 (51%)
Query: 600 RAVSLLIQNKDLITPSEVVTQLLNARDKCDSRYFLHLYLHALFEVNPHAG-KDFHDMQVE 658
+ + LL +N+ I+ + + + K + L YL + + + + +E
Sbjct: 748 KPIDLLFENRHTISVARIYEIFEHDCPKSFKK-ILFCYLIKFLDTDDSFMISPYENQLIE 806
Query: 659 LYADYDLKMLLPFLRSSQHYTLEKAYEICV-KRDLLREQVFILGRMGNTKHALAVIINKL 717
LY++YD + LLPFL+ +Y +E A E+C K L E +++ G++G TK AL++II++L
Sbjct: 807 LYSEYDRQSLLPFLQKHNNYNVESAIEVCSSKLGLYNELIYLWGKIGETKKALSLIIDEL 866
Query: 718 GDIEEAVEFVNMQHDDELWEELIKQCLNKPEMVGVLLEHTVGNLDPLY--IVNMVPNGLE 775
+ + A++FV D ELWE +I L+KP +L + +Y ++ + + L+
Sbjct: 867 KNPQLAIDFVKNWGDSELWEFMINYSLDKPNFTKAILTCS-DETSEIYLKVIRGMSDDLQ 925
Query: 776 IPRLRDRLVKIITDYRTETSLR 797
I L+D + I+ + +R
Sbjct: 926 IDNLQDIIKHIVQENSLSLEVR 947
Score = 213 (80.0 bits), Expect = 1.8e-39, Sum P(3) = 1.8e-39
Identities = 57/200 (28%), Positives = 99/200 (49%)
Query: 37 PRLKYQRMGGSLP-SLLANDAASCVAVAERMIALGTHAGTVHILDFLGNQVKEFPAHTAA 95
P LKY R+ LP + D+ S + A GTH+G +H+ +K H ++
Sbjct: 99 PLLKYTRIS-QLPKNFFQRDSISSCLFGDTFFAFGTHSGILHLTTCAFEPIKTIKCHRSS 157
Query: 96 VNDLSFDVDGEYVGSCSDDGSVVINSLFTDEKM-KFDYHRPMKAISLDPDYTRKMSRRFV 154
+ L + DG+Y + S DG+V+I S+ + + ++D+ RP+ +++L ++ + SR FV
Sbjct: 158 I--LCINTDGKYFATGSIDGTVIIGSMDDPQNITQYDFKRPINSVALHSNF--QASRMFV 213
Query: 155 AGGLAGHLYLNSKKWLGYR-DQVLHSGE--------------GPVHVVKWRTSLIAWAND 199
+GG+AG + L+ + WLG R D VL+ + GP+ + LI W +D
Sbjct: 214 SGGMAGDVVLSQRNWLGNRIDIVLNKKKKKKTRKDDLSSDMKGPIMGIYTMGDLILWMDD 273
Query: 200 AGVKVYDAANDQRITFIERP 219
G+ D ++ I P
Sbjct: 274 DGITFCDVPTRSQLLNIPFP 293
Score = 128 (50.1 bits), Expect = 1.8e-39, Sum P(3) = 1.8e-39
Identities = 66/313 (21%), Positives = 126/313 (40%)
Query: 261 ANGTYRHVGMNQVDIVASFQTSYYISGIAPF-GDCLVVLAY-IPGEEDGE--------KE 310
A ++R +V++ F S I+G+A F D L+ L + I EE+ K
Sbjct: 369 AASSFRGTPDKKVELECHFTVSMLITGLASFKDDQLLCLGFDIDIEEEATIDEDMKEGKN 428
Query: 311 FSSTLPSRQGNAQRPEVRIVT-WNNDELTTDALPVLGFEHYKAKDYSLAHAPFSGSSYAG 369
FS + PE++IV +N DE+ D + + +E DY L
Sbjct: 429 FSKRPENLLAKGNAPELKIVDLFNGDEIYNDEVIMKNYEKLSINDYHL------------ 476
Query: 370 GQWAAGDEPLYYIVSPKDVVIAKPRDAEDHIAWLLEHGWHEKALAAVEAGQGRSELLDEV 429
G+ P YY++S D + + +DH W +E + KA + G E +
Sbjct: 477 GKHIDKTTPEYYLISSNDAIRVQELSLKDHFDWFMERKQYYKAWKIGKYVIGSEERFS-I 535
Query: 430 GSRYLDHLIVERKYAEAAS----LCPKLLRG----SASAWERWVFHFAHLRQLPV----- 476
G ++L+ L+ ++ + + + L S + + +A + ++ +
Sbjct: 536 GLKFLNSLVTKKDWGTLVDHLNIIFEETLNSLDSNSYDVTQNVLKEWADIIEILITSGNI 595
Query: 477 --LVPYMPTENPRLRDTAYEVALVALATNPSFHKYLLSTVKSWPPVIYSALPVISAIEPQ 534
+ P +P + P LR + Y+ L N +K+ + W ++S +E +
Sbjct: 596 VEIAPLIP-KKPALRKSVYDDVLHYFLANDMINKFH-EYITKWDLKLFSVEDFEEELETR 653
Query: 535 LNSSSM-TDALKE 546
+ ++S T + KE
Sbjct: 654 IEAASEPTASSKE 666
Score = 100 (40.3 bits), Expect = 9.7e-28, Sum P(3) = 9.7e-28
Identities = 31/105 (29%), Positives = 47/105 (44%)
Query: 162 LYLNSKKWLGYRDQVLHSG-EGPVHVVKWRTSLIAWANDAGVKVYDAANDQRITFIERPR 220
+ LN KK R L S +GP+ + LI W +D G+ D ++ I P
Sbjct: 235 IVLNKKKKKKTRKDDLSSDMKGPIMGIYTMGDLILWMDDDGITFCDVPTRSQLLNIPFPS 294
Query: 221 G-----SPRPELLLPHLVWQDDTLLVIGWGTYIKIASIK-TNQSN 259
RP+L PH+ + + +VIGWG+ I + + T SN
Sbjct: 295 RIFNVQDVRPDLFRPHVHFLESDRVVIGWGSNIWLFKVSFTKDSN 339
Score = 66 (28.3 bits), Expect = 5.0e-33, Sum P(3) = 5.0e-33
Identities = 30/137 (21%), Positives = 55/137 (40%)
Query: 477 LVPYMPTENPRLRDTAYEVALVALATNPSFHKYLLSTVKSWPPVIYSALPVISAIEPQLN 536
+ P +P + P LR + Y+ L N +K+ + W ++S +E ++
Sbjct: 598 IAPLIP-KKPALRKSVYDDVLHYFLANDMINKFH-EYITKWDLKLFSVEDFEEELETRIE 655
Query: 537 SSSM-TDALKEA---------LAELYVIDGHYEKAFSLYADLMKPYIFDFIENHNLHDAI 586
++S T + KE L LY+ + Y KA I+ NL
Sbjct: 656 AASEPTASSKEEGSNITYRTELVHLYLKENKYTKAIPHLLKAKDLRALTIIKIQNLLPQY 715
Query: 587 REKVVQLMLLDCKRAVS 603
+++V ++LL K +S
Sbjct: 716 LDQIVDIILLPYKGEIS 732
Score = 40 (19.1 bits), Expect = 8.7e-21, Sum P(3) = 8.7e-21
Identities = 6/30 (20%), Positives = 16/30 (53%)
Query: 552 YVIDGHYEKAFSLYADLMKPYIFDFIENHN 581
++I + + LY++ + + F++ HN
Sbjct: 795 FMISPYENQLIELYSEYDRQSLLPFLQKHN 824
>UNIPROTKB|H7BZX6 [details] [associations]
symbol:VPS41 "Vacuolar protein sorting-associated protein
41 homolog" species:9606 "Homo sapiens" [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] InterPro:IPR000547 Pfam:PF00637
GO:GO:0006886 GO:GO:0016192 GO:GO:0005622 InterPro:IPR019453
Pfam:PF10367 EMBL:AC011292 EMBL:AC004850 EMBL:AC005247
HGNC:HGNC:12713 ChiTaRS:VPS41 ProteinModelPortal:H7BZX6
Ensembl:ENST00000448833 Uniprot:H7BZX6
Length = 150
Score = 261 (96.9 bits), Expect = 2.1e-21, P = 2.1e-21
Identities = 48/110 (43%), Positives = 74/110 (67%)
Query: 695 EQVFILGRMGNTKHALAVIINKLGDIEEAVEFVNMQHDDELWEELIKQCLNKPEMVGVLL 754
E V++L RMGN++ AL +I+ +L D+++A+EF Q D ELWE+LI ++KP + LL
Sbjct: 3 ETVYLLSRMGNSRSALKMIMEELHDVDKAIEFAKEQDDGELWEDLILYSIDKPPFITGLL 62
Query: 755 EHTVGNLDPLYIVNMVPNGLEIPRLRDRLVKIITDYRTETSLRHGCNDIL 804
+ ++DP+ +++ + G+EIP LRD LVKI+ DY + LR GC IL
Sbjct: 63 NNIGTHVDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQILLREGCKKIL 112
>UNIPROTKB|H7C0K2 [details] [associations]
symbol:VPS41 "Vacuolar protein sorting-associated protein
41 homolog" species:9606 "Homo sapiens" [GO:0006886 "intracellular
protein transport" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] InterPro:IPR000547 Pfam:PF00637
GO:GO:0006886 GO:GO:0016192 GO:GO:0005622 EMBL:AC011292
EMBL:AC004850 EMBL:AC005247 HGNC:HGNC:12713 ChiTaRS:VPS41
ProteinModelPortal:H7C0K2 Ensembl:ENST00000439468 Bgee:H7C0K2
Uniprot:H7C0K2
Length = 109
Score = 223 (83.6 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 40/97 (41%), Positives = 66/97 (68%)
Query: 700 LGRMGNTKHALAVIINKLGDIEEAVEFVNMQHDDELWEELIKQCLNKPEMVGVLLEHTVG 759
L RMGN++ AL +I+ +L D+++A+EF Q D ELWE+LI ++KP + LL +
Sbjct: 1 LSRMGNSRSALKMIMEELHDVDKAIEFAKEQDDGELWEDLILYSIDKPPFITGLLNNIGT 60
Query: 760 NLDPLYIVNMVPNGLEIPRLRDRLVKIITDYRTETSL 796
++DP+ +++ + G+EIP LRD LVKI+ DY + ++
Sbjct: 61 HVDPILLIHRIKEGMEIPNLRDSLVKILQDYNLQVTI 97
>UNIPROTKB|C9J2U9 [details] [associations]
symbol:VPS41 "Vacuolar protein sorting-associated protein
41 homolog" species:9606 "Homo sapiens" [GO:0005769 "early
endosome" evidence=IEA] [GO:0005770 "late endosome" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0008017 "microtubule
binding" evidence=IEA] InterPro:IPR017986 InterPro:IPR015943
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0005770 GO:GO:0005874
GO:GO:0005769 EMBL:AC011292 EMBL:AC004850 EMBL:AC005247
HGNC:HGNC:12713 ChiTaRS:VPS41 IPI:IPI00924806
ProteinModelPortal:C9J2U9 SMR:C9J2U9 STRING:C9J2U9
Ensembl:ENST00000457055 ArrayExpress:C9J2U9 Bgee:C9J2U9
Uniprot:C9J2U9
Length = 73
Score = 146 (56.5 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 26/68 (38%), Positives = 43/68 (63%)
Query: 60 VAVAERMIALGTHAGTVHILDFLGNQVKEFPAHTAAVNDLSFDVDGEYVGSCSDDGSVVI 119
+ V ++ +ALGTH G V++LD GN ++F +N +S D GE++G CS+DG V +
Sbjct: 1 MTVHDKFLALGTHYGKVYLLDVQGNITQKFDVSPVKINQISLDESGEHMGVCSEDGKVQV 60
Query: 120 NSLFTDEK 127
L++ E+
Sbjct: 61 FGLYSGEE 68
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.137 0.415 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 807 781 0.00094 121 3 11 22 0.38 34
37 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 23
No. of states in DFA: 631 (67 KB)
Total size of DFA: 430 KB (2205 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 65.69u 0.13s 65.82t Elapsed: 00:00:03
Total cpu time: 65.70u 0.13s 65.83t Elapsed: 00:00:03
Start: Mon May 20 22:43:49 2013 End: Mon May 20 22:43:52 2013